BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 007577
         (597 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|296086512|emb|CBI32101.3| unnamed protein product [Vitis vinifera]
          Length = 630

 Score =  874 bits (2257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/631 (71%), Positives = 507/631 (80%), Gaps = 41/631 (6%)

Query: 3   STSTISLYSHP-------------------KLSHRAQPVLSRS---------FCQARDAP 34
           STS I LYSHP                   ++SHRA+P   RS         +C    A 
Sbjct: 5   STSAICLYSHPMVLSSSSSQSPNLTFCSDSQISHRARPRNLRSQVLGSSWWGYC----AL 60

Query: 35  LSFALPFSGTRRCFRLKRLVVKAAARPEGGRRQ----RRVYRQSQSDNALTTAPVKQIAS 90
           L  ++  S  R  +R + LV  AA+  +G  R+    RRV++QSQ    L+  PV++IAS
Sbjct: 61  LPTSVYVSSIRH-YRFRTLVTVAASTADGVPRRPVSGRRVFKQSQGQGPLSPVPVREIAS 119

Query: 91  FVVPAGVFVSATFVLWKLVEKLLMPKPSRPSKPTA----EGMNWSVGAGTNLLSGFTGKL 146
           FVVPA +F + TFVLW+LVEK+L+PK SR S         G+ WS   GTNLL+G T K 
Sbjct: 120 FVVPASLFFAVTFVLWRLVEKILLPKSSRSSSLEKKSSSPGVKWSFAPGTNLLAGLTAKF 179

Query: 147 FRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
            RESKQ LNEFAKE+R+F SVDMSGRNFGDEGLFFLAESL YNQ AEEVSFAANGITAAG
Sbjct: 180 DRESKQKLNEFAKEIRSFGSVDMSGRNFGDEGLFFLAESLAYNQNAEEVSFAANGITAAG 239

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           +KAFDGVLQSNI LKTL+LSGNPIGDEG KCLCDIL+DNAG+++LQL+S DL DEGAKAI
Sbjct: 240 LKAFDGVLQSNIVLKTLDLSGNPIGDEGAKCLCDILIDNAGIQKLQLNSADLGDEGAKAI 299

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE+LK NS LR++ELNNNMIDYSGFTSL  ALLEN+TIR++HLNGNYGGALG  ALAKGL
Sbjct: 300 AEMLKKNSSLRIVELNNNMIDYSGFTSLGGALLENNTIRNIHLNGNYGGALGVAALAKGL 359

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           E NKSLRELHLHGNSIGDEG+R LMSGLSS KGKL +LDIGNN IS++GAFHVAEYIK  
Sbjct: 360 EANKSLRELHLHGNSIGDEGVRVLMSGLSSHKGKLTLLDIGNNEISSRGAFHVAEYIKKA 419

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           KSLLW+NLYMNDIGDEGAEKIADALK+NR+I TIDLGGNNIH+KG S IA VLKDN+VIT
Sbjct: 420 KSLLWLNLYMNDIGDEGAEKIADALKENRSIATIDLGGNNIHAKGVSKIAGVLKDNTVIT 479

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           +L+L YNPIG +GAKALSEVLKFHG I TLKLGWCQIGA GAEF+AD L+YN TIS LDL
Sbjct: 480 TLELGYNPIGPEGAKALSEVLKFHGKIKTLKLGWCQIGAKGAEFIADTLKYNTTISTLDL 539

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
           RANGLRDEGA CLA+S KVVNEAL S+DL FNEIRD+GAFAIAQALKANEDVAVTSLNLA
Sbjct: 540 RANGLRDEGAVCLARSMKVVNEALASLDLGFNEIRDEGAFAIAQALKANEDVAVTSLNLA 599

Query: 567 NNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
           +NFLTKFGQSALTDA+D VYEMSEKEVNIFF
Sbjct: 600 SNFLTKFGQSALTDARDHVYEMSEKEVNIFF 630


>gi|255558382|ref|XP_002520218.1| leucine rich repeat-containing protein, putative [Ricinus communis]
 gi|223540710|gb|EEF42273.1| leucine rich repeat-containing protein, putative [Ricinus communis]
          Length = 607

 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/614 (71%), Positives = 499/614 (81%), Gaps = 24/614 (3%)

Query: 1   MGSTSTISLYSHPKLSHRAQPVLSRSFCQARDAPLSFALPFSGTRRC---------FRLK 51
           MGS ST SLY HPK+S R Q     S  +     LSF    + +             R +
Sbjct: 1   MGSISTHSLYFHPKISLRLQ-----SEPRVHGGLLSFPNTIATSFTTTTTSRRRNFLRFR 55

Query: 52  RLVVKAAARPEGGRRQ----RRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWK 107
            L V+AAA  +GG R+    RRVYRQSQ ++AL  APV+QIAS V+PAG F+  TFVLWK
Sbjct: 56  SLTVRAAA--DGGSRRAASGRRVYRQSQGESALPNAPVQQIASVVMPAGAFLVVTFVLWK 113

Query: 108 LVEKLLMPKPSRPS----KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRA 163
           LVEK++MPKP R +    K  ++GMNWS  AG+NL  G T K+ RESKQ LNEFAKELR+
Sbjct: 114 LVEKMMMPKPKRAAIVENKSPSKGMNWSFAAGSNLFPGLTAKIDRESKQKLNEFAKELRS 173

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           FS VDMSG NFGDEGLFFLAES+ YNQT EEVSFAANGITA G+KAFD VLQSNI LKTL
Sbjct: 174 FSIVDMSGCNFGDEGLFFLAESIAYNQTLEEVSFAANGITAEGVKAFDRVLQSNIVLKTL 233

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLSGNPIGD+G K L DIL DNAG+E+LQL+S DL DEGAKAIA+LLK N  LRV+ELNN
Sbjct: 234 NLSGNPIGDDGAKSLSDILADNAGIEKLQLNSTDLGDEGAKAIADLLKKNPNLRVIELNN 293

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           NMIDYSGFTSLA + LEN+T+RS++LNGNYGGALGANAL+KG+EGNK+LRELHL GNSIG
Sbjct: 294 NMIDYSGFTSLAGSFLENATLRSIYLNGNYGGALGANALSKGIEGNKALRELHLQGNSIG 353

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           DEG+RALMSGLSS K KL  LDIGNNS+SAKGAFHVAEYIK  KSL W+N+YMNDIGDEG
Sbjct: 354 DEGVRALMSGLSSSKAKLTHLDIGNNSLSAKGAFHVAEYIKKSKSLFWMNMYMNDIGDEG 413

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           AEKIADALKQNR++  IDLGGNNIH+KG S IA+VLKDNS+IT+L++ YNPIG DGAKAL
Sbjct: 414 AEKIADALKQNRSLANIDLGGNNIHAKGISEIAQVLKDNSIITTLEVGYNPIGPDGAKAL 473

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
           SEVLKFHGN+  LKLGWCQIGA GAE +AD L+YNNTISILDLR NGLRDEGA CLA+S 
Sbjct: 474 SEVLKFHGNVKALKLGWCQIGAKGAEDIADTLKYNNTISILDLRGNGLRDEGAICLARSL 533

Query: 524 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            VVNE LT +DL FNEIRDDGAFAIAQALKANEDV +TSLNLANNFLTKFGQSAL+DA+D
Sbjct: 534 TVVNEVLTELDLGFNEIRDDGAFAIAQALKANEDVKITSLNLANNFLTKFGQSALSDARD 593

Query: 584 LVYEMSEKEVNIFF 597
            VYEM+EKEVNI F
Sbjct: 594 HVYEMNEKEVNIVF 607


>gi|356501981|ref|XP_003519801.1| PREDICTED: protein NLRC3-like [Glycine max]
          Length = 606

 Score =  865 bits (2234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/607 (71%), Positives = 504/607 (83%), Gaps = 11/607 (1%)

Query: 1   MGSTSTISLYSHPKLSHRAQPVLSRSFCQARDAPLSFALPFSGTRRCFRLKRLVVKAAAR 60
           M  TST+S+YSHP++    Q + S  F  A  A  +  LP    RR    +  V + ++ 
Sbjct: 1   MAFTSTLSIYSHPQVRLLNQRLQSLPFTAAGVAQFA-PLPPLNRRRTCSPRSFVFRVSSS 59

Query: 61  PEGGRRQ----RRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPK 116
            EG R +    RRVYRQSQ+   L++APVKQIA+ V P   F + TFV+WKLVEKLL+P 
Sbjct: 60  VEGSRARSGGSRRVYRQSQASAPLSSAPVKQIANVVAPVAAFFALTFVIWKLVEKLLVPT 119

Query: 117 PSR------PSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMS 170
           P +       S+  ++G+ WS  AGTNLLS    K+ R+SKQ LNEFA+ELR+FSS+DMS
Sbjct: 120 PKQLKSLTVESQSPSQGLKWSFAAGTNLLSQLGEKIERQSKQKLNEFARELRSFSSIDMS 179

Query: 171 GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPI 230
           GRNFGDEGLFFLAESL +NQTAEEVSFAANGITAAG++AFDGVLQSNI LKTL+LSGN +
Sbjct: 180 GRNFGDEGLFFLAESLAFNQTAEEVSFAANGITAAGLRAFDGVLQSNITLKTLDLSGNLV 239

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           GDEG KCLCDILV+N+ +E+LQL+S DL DEGAKAIAE+LK NS LRVLELNNNMI+YSG
Sbjct: 240 GDEGAKCLCDILVNNSSIEKLQLNSADLGDEGAKAIAEMLKKNSSLRVLELNNNMIEYSG 299

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           F+SLA ALLEN++IR++HLNGNYGGALGANALAK LE NKSLRELHLHGNSIGDEGIR+L
Sbjct: 300 FSSLAGALLENNSIRNIHLNGNYGGALGANALAKALESNKSLRELHLHGNSIGDEGIRSL 359

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           M+GLSS KGKL +LDIGNNS++AKGAFHVAEYIK  KSLLW+NLYMNDIGDEGAEKIA A
Sbjct: 360 MTGLSSHKGKLTLLDIGNNSLTAKGAFHVAEYIKKSKSLLWLNLYMNDIGDEGAEKIAVA 419

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           LK+NR+I+T+DLGGNNIH  G +AIA+VLKDN VIT+L+L+YNPIG DGAKAL+EVLKFH
Sbjct: 420 LKENRSISTLDLGGNNIHVDGVNAIAQVLKDNLVITTLELSYNPIGPDGAKALAEVLKFH 479

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEAL 530
           GNI TLKLGWCQIGA GAEF+AD L+YN TISILDLRANGLRDEGA+ LA+S KVVNEAL
Sbjct: 480 GNIKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRANGLRDEGAQSLARSLKVVNEAL 539

Query: 531 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
           TS+DL FNEIRDDGAFAIAQALK+N+DVAVTSLN+ +NFLTKFGQ AL DA+D V EM+E
Sbjct: 540 TSLDLGFNEIRDDGAFAIAQALKSNDDVAVTSLNIGSNFLTKFGQGALADARDHVLEMTE 599

Query: 591 KEVNIFF 597
           KE+NIF 
Sbjct: 600 KEINIFL 606


>gi|359473416|ref|XP_002266381.2| PREDICTED: protein NLRC3-like [Vitis vinifera]
          Length = 684

 Score =  864 bits (2232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/600 (73%), Positives = 496/600 (82%), Gaps = 22/600 (3%)

Query: 15  LSHRAQPVLSRS---------FCQARDAPLSFALPFSGTRRCFRLKRLVVKAAARPEGGR 65
           +SHRA+P   RS         +C     P S    +  + R +R + LV  AA+  +G  
Sbjct: 90  ISHRARPRNLRSQVLGSSWWGYCAL--LPTSV---YVSSIRHYRFRTLVTVAASTADGVP 144

Query: 66  RQ----RRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPKPSRPS 121
           R+    RRV++QSQ    L+  PV++IASFVVPA +F + TFVLW+LVEK+L+PK SR S
Sbjct: 145 RRPVSGRRVFKQSQGQGPLSPVPVREIASFVVPASLFFAVTFVLWRLVEKILLPKSSRSS 204

Query: 122 KPTA----EGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDE 177
                    G+ WS   GTNLL+G T K  RESKQ LNEFAKE+R+F SVDMSGRNFGDE
Sbjct: 205 SLEKKSSSPGVKWSFAPGTNLLAGLTAKFDRESKQKLNEFAKEIRSFGSVDMSGRNFGDE 264

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           GLFFLAESL YNQ AEEVSFAANGITAAG+KAFDGVLQSNI LKTL+LSGNPIGDEG KC
Sbjct: 265 GLFFLAESLAYNQNAEEVSFAANGITAAGLKAFDGVLQSNIVLKTLDLSGNPIGDEGAKC 324

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           LCDIL+DNAG+++LQL+S DL DEGAKAIAE+LK NS LR++ELNNNMIDYSGFTSL  A
Sbjct: 325 LCDILIDNAGIQKLQLNSADLGDEGAKAIAEMLKKNSSLRIVELNNNMIDYSGFTSLGGA 384

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           LLEN+TIR++HLNGNYGGALG  ALAKGLE NKSLRELHLHGNSIGDEG+R LMSGLSS 
Sbjct: 385 LLENNTIRNIHLNGNYGGALGVAALAKGLEANKSLRELHLHGNSIGDEGVRVLMSGLSSH 444

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
           KGKL +LDIGNN IS++GAFHVAEYIK  KSLLW+NLYMNDIGDEGAEKIADALK+NR+I
Sbjct: 445 KGKLTLLDIGNNEISSRGAFHVAEYIKKAKSLLWLNLYMNDIGDEGAEKIADALKENRSI 504

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
            TIDLGGNNIH+KG S IA VLKDN+VIT+L+L YNPIG +GAKALSEVLKFHG I TLK
Sbjct: 505 ATIDLGGNNIHAKGVSKIAGVLKDNTVITTLELGYNPIGPEGAKALSEVLKFHGKIKTLK 564

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           LGWCQIGA GAEF+AD L+YN TIS LDLRANGLRDEGA CLA+S KVVNEAL S+DL F
Sbjct: 565 LGWCQIGAKGAEFIADTLKYNTTISTLDLRANGLRDEGAVCLARSMKVVNEALASLDLGF 624

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
           NEIRD+GAFAIAQALKANEDVAVTSLNLA+NFLTKFGQSALTDA+D VYEMSEKEVNIFF
Sbjct: 625 NEIRDEGAFAIAQALKANEDVAVTSLNLASNFLTKFGQSALTDARDHVYEMSEKEVNIFF 684


>gi|357486129|ref|XP_003613352.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula]
 gi|355514687|gb|AES96310.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula]
          Length = 606

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/605 (70%), Positives = 498/605 (82%), Gaps = 12/605 (1%)

Query: 3   STSTISLYSHPKLSHRAQPVLSRSFCQARDAPLSFALPFSGTRRCFRL----KRLVVKAA 58
           STST+SLYSHP+          +S   A  A     LP    RR F L    +R VVKA 
Sbjct: 4   STSTLSLYSHPQPPQLRLRRRLQSL--AGTAIQFVILPTLNRRRPFGLGAGSRRFVVKAE 61

Query: 59  ARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPKPS 118
                    RRVYR+SQ+D  L+ A VKQIA+ V P GVF++ T V+WKLVEKL+ P P 
Sbjct: 62  GTSARASGSRRVYRESQADATLSVASVKQIATNVAPFGVFLALTIVIWKLVEKLVAPTPK 121

Query: 119 RPSKPTAE------GMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGR 172
           +    TAE      G+ WS  AGTNLLS    K+  +SKQ LNEFA+ELR+FS  DMSGR
Sbjct: 122 QSKSTTAESQSASQGLKWSFAAGTNLLSQLGAKIDSQSKQKLNEFARELRSFSYTDMSGR 181

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           NFGDEGLFFLAESL +NQ AEEVSFAANGITAAG+KAFDGVLQSNI LKTL+LSGNP+GD
Sbjct: 182 NFGDEGLFFLAESLAFNQNAEEVSFAANGITAAGMKAFDGVLQSNITLKTLDLSGNPVGD 241

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           EG KCLCDIL+ N+ +E+LQL+S DL DEGAKAIAE+LK NS LRVLELNNNMI+YSGFT
Sbjct: 242 EGAKCLCDILMGNSTIEKLQLNSADLGDEGAKAIAEMLKKNSSLRVLELNNNMIEYSGFT 301

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           SLA ALLEN++IR++HLNGNYGGALG NALAK LEGNKS+RELHLHGNSIGDEGIR+LM+
Sbjct: 302 SLAGALLENNSIRNIHLNGNYGGALGVNALAKALEGNKSIRELHLHGNSIGDEGIRSLMT 361

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
           GL+S KGKL +LDIGNNS++AKGAF+VA YIK  KSLLW+N+YMNDIGDEGAEK+ADALK
Sbjct: 362 GLTSHKGKLTLLDIGNNSLTAKGAFYVAGYIKKIKSLLWLNIYMNDIGDEGAEKLADALK 421

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           +NR+ITT+D+GGNNIH+ G  A+A+VLKDNSVIT+L+L+YNPIG DGAKAL+EV+KFHGN
Sbjct: 422 ENRSITTLDMGGNNIHAVGVGAVAKVLKDNSVITTLELSYNPIGPDGAKALAEVIKFHGN 481

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           + TLKLGWCQIGA GAEF+AD L+YN TIS+LDLRANGLRDEGA CLA+S KVVNEALTS
Sbjct: 482 VKTLKLGWCQIGAKGAEFIADALKYNTTISVLDLRANGLRDEGALCLARSLKVVNEALTS 541

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKE 592
           +DL FNEIRDDGAFAIAQALK+NEDVAVTSLN+ +NFLTKFGQSAL+DA+D V+EM+EKE
Sbjct: 542 LDLGFNEIRDDGAFAIAQALKSNEDVAVTSLNIGSNFLTKFGQSALSDARDHVFEMTEKE 601

Query: 593 VNIFF 597
           + IFF
Sbjct: 602 IAIFF 606


>gi|297843864|ref|XP_002889813.1| EMB2004 [Arabidopsis lyrata subsp. lyrata]
 gi|297335655|gb|EFH66072.1| EMB2004 [Arabidopsis lyrata subsp. lyrata]
          Length = 605

 Score =  857 bits (2214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/603 (71%), Positives = 496/603 (82%), Gaps = 10/603 (1%)

Query: 3   STSTISLYSHPKLSHRAQPVLSRSFCQARDAPLS----FALPFSGTRRCFRLKRLVVKAA 58
           STS+++L+S PK S       S    +   + +S       P     R  RL    +KAA
Sbjct: 5   STSSLNLHSLPKASSGLSQWRSGFRYELLGSSVSRNRLLVSPVVILHRSPRLP--AIKAA 62

Query: 59  ARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPKPS 118
              +GG ++ RVY++SQ+ +    A ++QIAS ++P G F   TFVLWK+VEK + PK  
Sbjct: 63  YNSDGGSKRSRVYKESQAASGFPNAKLQQIASSLLPLGSFAVVTFVLWKVVEKFMSPKSP 122

Query: 119 RPS----KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNF 174
           + +    K + +G+ WS+GAGTNLL GF  K+ RE+KQ LNEFAKELR+F SVDMSG NF
Sbjct: 123 KTAAGENKSSTQGVKWSIGAGTNLLQGFAAKVDREAKQRLNEFAKELRSFRSVDMSGCNF 182

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEGLFFLAESLGYNQT EEVSF+ANGITAAG+KAFDGVLQSNI LK LNLSGNPIGDEG
Sbjct: 183 GDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGVLQSNIMLKVLNLSGNPIGDEG 242

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            K LC  L++N+ +E LQL+S D+ DEGAK IAELLK NS LR++ELNNNMIDYSGFTSL
Sbjct: 243 AKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSL 302

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A ALLEN+TIR+LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG RALM+GL
Sbjct: 303 AGALLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGL 362

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
           SS KGKLA+LD+GNNSISAKGAF+VAEYIK  KSL+W+NLYMNDIGDEGAEKIADALKQN
Sbjct: 363 SSHKGKLALLDLGNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADALKQN 422

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           R+I TIDLGGNNIH++G +AIA+ LKDN++IT+L++ YNPIG DGAKALSE+LKFHGN+ 
Sbjct: 423 RSIATIDLGGNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVK 482

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
           TLKLGWCQI A GAE VADMLRYNNTIS+LDLRANGLRDEGA CLA+S KVVNEALTS+D
Sbjct: 483 TLKLGWCQIAAKGAEHVADMLRYNNTISVLDLRANGLRDEGASCLARSLKVVNEALTSVD 542

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVN 594
           L FNEIRDDGAFAIAQALKANEDV VTS+NL NNF+TKFGQSALTDA+D V EM+EKEV 
Sbjct: 543 LGFNEIRDDGAFAIAQALKANEDVTVTSINLGNNFITKFGQSALTDARDHVLEMTEKEVE 602

Query: 595 IFF 597
           IFF
Sbjct: 603 IFF 605


>gi|18391166|ref|NP_563871.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein [Arabidopsis thaliana]
 gi|15810395|gb|AAL07085.1| unknown protein [Arabidopsis thaliana]
 gi|20258921|gb|AAM14154.1| unknown protein [Arabidopsis thaliana]
 gi|332190466|gb|AEE28587.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein [Arabidopsis thaliana]
          Length = 605

 Score =  855 bits (2208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/603 (71%), Positives = 495/603 (82%), Gaps = 10/603 (1%)

Query: 3   STSTISLYSHPKLSHRAQPVLSRSFCQARDAPLS----FALPFSGTRRCFRLKRLVVKAA 58
           STS+++L+S PK S       S    +   + +S    F  P     R  RL    +KAA
Sbjct: 5   STSSLNLHSLPKASSGLGQWKSGFRYELLGSSVSRNRLFVSPVVIHHRSPRLP--AIKAA 62

Query: 59  ARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPKPS 118
              +GG ++ RVY++SQ+ +    A V+QIAS V+P G F   TFVLWK+V K + PK  
Sbjct: 63  YNSDGGSKRSRVYKESQAASGFPNAKVQQIASSVLPLGSFAVVTFVLWKVVGKFMSPKSP 122

Query: 119 RPS----KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNF 174
           + S      + +G+ WS+GAGTNLL GF  K+ RE+KQ LNEFAKELR+F SVDMSG NF
Sbjct: 123 KTSAGENNSSTQGVKWSIGAGTNLLQGFAAKVDREAKQRLNEFAKELRSFRSVDMSGCNF 182

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEGLFFLAESLGYNQT EEVSF+ANGITAAG+KAFDGVLQSNI LK LNLSGNPIGDEG
Sbjct: 183 GDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEG 242

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            K LC  L++N+ +E LQL+S D+ DEGAK IAELLK NS LR++ELNNNMIDYSGFTSL
Sbjct: 243 AKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSL 302

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A ALLEN+TIR+LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG RALM+GL
Sbjct: 303 AGALLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGL 362

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
           SS KGK+A+LD+GNNSISAKGAF+VAEYIK  KSL+W+NLYMNDIGDEGAEKIAD+LKQN
Sbjct: 363 SSHKGKVALLDLGNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQN 422

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           R+I TIDLGGNNIH++G +AIA+ LKDN++IT+L++ YNPIG DGAKALSE+LKFHGN+ 
Sbjct: 423 RSIATIDLGGNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVK 482

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
           TLKLGWCQI A GAE VADMLRYNNTIS+LDLRANGLRDEGA CLA+S KVVNEALTS+D
Sbjct: 483 TLKLGWCQIAAKGAEHVADMLRYNNTISVLDLRANGLRDEGASCLARSLKVVNEALTSVD 542

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVN 594
           L FNEIRDDGAFAIAQALKANEDV VTS+NL NNF+TKFGQSALTDA+D V EM+EKEV 
Sbjct: 543 LGFNEIRDDGAFAIAQALKANEDVTVTSINLGNNFITKFGQSALTDARDHVLEMTEKEVE 602

Query: 595 IFF 597
           IFF
Sbjct: 603 IFF 605


>gi|356498020|ref|XP_003517853.1| PREDICTED: protein NLRC3-like [Glycine max]
          Length = 606

 Score =  854 bits (2207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/607 (70%), Positives = 505/607 (83%), Gaps = 11/607 (1%)

Query: 1   MGSTSTISLYSHPKLSHRAQPVLSRSFCQARDAPLSFALPFSGTRRCFRLKRLVVKAAAR 60
           M  TST+SLYSHP++  R Q + S +F  A  A  +  LP    RR    +  VV+A++ 
Sbjct: 1   MAFTSTLSLYSHPQVRLRCQRLQSLAFTAAGVAQFA-PLPPLNCRRTCSPRSFVVRASSS 59

Query: 61  PEGGRRQ----RRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPK 116
            EG R +    RRVYRQSQ++  L++APVKQIA+ V P   F + TFV+WKLVEKLL+P 
Sbjct: 60  VEGSRARAGGSRRVYRQSQANAPLSSAPVKQIANVVAPVAAFFALTFVIWKLVEKLLVPT 119

Query: 117 PSR------PSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMS 170
           P +       S+  ++G+ WS  AGTNLLS    K+ R+S+Q LNEFA+ELR+F S+DMS
Sbjct: 120 PKQLKYSTGESQSPSQGLKWSFAAGTNLLSQLGEKIERQSRQKLNEFARELRSFPSIDMS 179

Query: 171 GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPI 230
           GRNFGDEGLFFLAESL +NQ AEEVSFAANGITAAG++AFDGVLQSNI LKTL+LSGN +
Sbjct: 180 GRNFGDEGLFFLAESLAFNQIAEEVSFAANGITAAGLRAFDGVLQSNITLKTLDLSGNLV 239

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           GDEG KCLCDILV+N+ +E+LQL+S DL D GAKAIAE+LK NS LRVLELNNNMI+YSG
Sbjct: 240 GDEGAKCLCDILVNNSSIEKLQLNSADLGDVGAKAIAEMLKKNSSLRVLELNNNMIEYSG 299

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           F+SLA ALLEN++IR++HLNGNYGGALGANALAK LE NKS+RELHLHGNSIGDEGI +L
Sbjct: 300 FSSLAGALLENNSIRNIHLNGNYGGALGANALAKALESNKSIRELHLHGNSIGDEGICSL 359

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           M+GLSS KGKL +LDIGNNS++AKG+FHVAEYI+  ++LLW+NLYMNDIGDEGAEKIA A
Sbjct: 360 MTGLSSHKGKLTLLDIGNNSLTAKGSFHVAEYIRKSRNLLWLNLYMNDIGDEGAEKIAVA 419

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           LK+NR+I+T+DLGGNNIH  G +AIA+VLKDN VIT+L+L+YNPIG DGAKAL+EVLKFH
Sbjct: 420 LKENRSISTLDLGGNNIHVDGVNAIAQVLKDNLVITTLELSYNPIGPDGAKALAEVLKFH 479

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEAL 530
           GNI TLKLGWCQIGA GAE +AD L+YN TISILDLRANGLRDEGA+ LA+S KVVNEAL
Sbjct: 480 GNIKTLKLGWCQIGAKGAECIADALKYNTTISILDLRANGLRDEGAQSLARSLKVVNEAL 539

Query: 531 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
           TS+DL FNEIRDDGAFAIAQALK+N+DVAVTSLN+A+NFLTKFGQ AL DA+D V EM+E
Sbjct: 540 TSLDLGFNEIRDDGAFAIAQALKSNDDVAVTSLNIASNFLTKFGQGALADARDHVLEMTE 599

Query: 591 KEVNIFF 597
           KE+NIF 
Sbjct: 600 KEINIFL 606


>gi|258678027|gb|ACV87735.1| chloroplast envelope protein 1 [Nicotiana benthamiana]
          Length = 614

 Score =  812 bits (2098), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/616 (67%), Positives = 497/616 (80%), Gaps = 21/616 (3%)

Query: 1   MGSTSTISLYSHP---------KLSHRAQPVLSRSFCQARDAPLSFALPFSGT---RRCF 48
           MGS ST+SL SH          KL       L+ S+      P+S +L FS +    +C 
Sbjct: 1   MGSASTLSLCSHSTVNFEFYRRKLGFGRDQALNSSYSSYVLLPISPSLYFSSSCSRSKCL 60

Query: 49  RLKRLVVKAAARPEGGRRQRR----VYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFV 104
           +LKR++V+A++    G R+      VY++SQ+     T PV QIASFVVPAG FV  +FV
Sbjct: 61  QLKRVIVRASSSSSTGSRRSSSSRRVYKESQAQPP--TLPVDQIASFVVPAGAFVVISFV 118

Query: 105 LWKLVEKLLMPKPSRPS---KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKEL 161
           LWKLVEK+L PKP+R S     + EG+ W +  GTNLL GF  K+ RESK  LNEFAKEL
Sbjct: 119 LWKLVEKILQPKPARTSAEESKSTEGVKWFIAPGTNLLPGFGEKIERESKLRLNEFAKEL 178

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+FS VDMSGRNFG++GL FLAESL YNQTAEEV+FAANGITA G+KAFDG+LQSNIALK
Sbjct: 179 RSFSIVDMSGRNFGNDGLIFLAESLAYNQTAEEVNFAANGITAEGLKAFDGILQSNIALK 238

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TLNLSGN IGDEG KCLC+IL +N+G+++LQL+S  L DEGAKAI E+LK NS LRV+EL
Sbjct: 239 TLNLSGNAIGDEGAKCLCEILANNSGIQKLQLNSTGLGDEGAKAIGEMLKTNSTLRVVEL 298

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           NNN IDYSGF+ LA +LLEN +++SLHLNGNYGG LGA ALAKGLEGNKSLREL+L GNS
Sbjct: 299 NNNQIDYSGFSGLAGSLLENKSLQSLHLNGNYGGPLGAAALAKGLEGNKSLRELYLQGNS 358

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGDEG+RAL+SGLSSRKGKL +LD+ NNSI+A+GA+HVAEY K  KSLLW+NLYMNDI D
Sbjct: 359 IGDEGVRALISGLSSRKGKLVLLDMANNSITARGAYHVAEYAKKSKSLLWLNLYMNDIKD 418

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGAEKIA+ALK+NR+IT IDLGGN+IH+KG SA+A VLKDNSVITSL+L YNPIG +GAK
Sbjct: 419 EGAEKIAEALKENRSITNIDLGGNDIHAKGISALAEVLKDNSVITSLELGYNPIGPEGAK 478

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           AL+EVLKFHGN+  L LGWCQIGA GAE +ADML+YN+TIS LDLRANGLRDEGA CLA+
Sbjct: 479 ALAEVLKFHGNVKDLMLGWCQIGAKGAEAIADMLKYNSTISNLDLRANGLRDEGAICLAR 538

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           S KVVNEALT+++L FNEIRD+GAF+IAQALKANEDV +TS+NL +NFLTK GQ+ALTDA
Sbjct: 539 SLKVVNEALTTLNLGFNEIRDEGAFSIAQALKANEDVRLTSINLTSNFLTKLGQTALTDA 598

Query: 582 KDLVYEMSEKEVNIFF 597
           +D V+EM+EKE+ + F
Sbjct: 599 RDHVFEMTEKELAVMF 614


>gi|449452044|ref|XP_004143770.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3-like [Cucumis
           sativus]
          Length = 602

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/607 (68%), Positives = 487/607 (80%), Gaps = 21/607 (3%)

Query: 3   STSTISLYSHPKLSHRAQPVLSRSF--------CQARDAPLSFALPFSGTRRCFRLKRLV 54
           STSTIS  SHPK+  R   + S             A  A LS     +   R FRL+ LV
Sbjct: 5   STSTISFCSHPKIFLRLHSLGSPRVGFGASGLNYHANGAFLSV----THRTRGFRLRNLV 60

Query: 55  VKAAARPEGGRRQ----RRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVE 110
           +KA  R + G R+    RRVYR SQ+ ++   APVKQ+AS V+PAGV V  TFVLWKLVE
Sbjct: 61  LKATLRSDSGSRRAATSRRVYRDSQTQSSSLVAPVKQLASTVLPAGVLVVFTFVLWKLVE 120

Query: 111 KLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMS 170
           +L++ K  + S       ++  GAG NL      K+ RE+K  LN+FAKELR F SVDM+
Sbjct: 121 RLMVQKSDKSSSSVKNKWSF--GAGINLFPDLAAKVDREAKLKLNDFAKELRTFRSVDMT 178

Query: 171 GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPI 230
            RNFGDEGLFFLAESLGYNQT EEV+F+ANGITA GIKAFDGVLQSNI LKTL+LSGNPI
Sbjct: 179 ARNFGDEGLFFLAESLGYNQTVEEVNFSANGITAEGIKAFDGVLQSNIILKTLDLSGNPI 238

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           GD+GVK LCD+LV+N+ +E L+L+S D+ DEGAKA++E+LKNNS LR++ELNNNMIDYSG
Sbjct: 239 GDDGVKTLCDLLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSSLRIIELNNNMIDYSG 298

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           FTSL    LEN+TIR++HL GNYGGALGANALAKGLEGNKSLRELHL+GNSIGDEG+R L
Sbjct: 299 FTSLX---LENNTIRNIHLTGNYGGALGANALAKGLEGNKSLRELHLNGNSIGDEGVRTL 355

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           +SGLSSRKGKLA+LDIGNNSI+AKGAFHVAE++K  KSL+ +NLYMNDIGDEGAEKIAD+
Sbjct: 356 ISGLSSRKGKLALLDIGNNSITAKGAFHVAEFVKRTKSLVLLNLYMNDIGDEGAEKIADS 415

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           LKQNRTI T+DLGGNNIH +G S +A+ LKDN  IT+L+++YNPIG +GA+ALSEVLKFH
Sbjct: 416 LKQNRTIKTLDLGGNNIHGEGISKVAQALKDNDTITTLEISYNPIGPEGAEALSEVLKFH 475

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEAL 530
           GN+  LKLGWC+IG  GAEF+A+ L+YN TIS+LDLR NGLRDEGA CLA+S KVVNEAL
Sbjct: 476 GNVKNLKLGWCKIGPKGAEFIAETLKYNTTISVLDLRGNGLRDEGATCLARSLKVVNEAL 535

Query: 531 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
           TS+DL FNEIRD GAFAIAQALKAN D+AVTSLNLANNFLTKFGQSALTDA+D V+EM E
Sbjct: 536 TSLDLGFNEIRDPGAFAIAQALKANGDIAVTSLNLANNFLTKFGQSALTDARDHVHEMCE 595

Query: 591 KEVNIFF 597
           +EV I +
Sbjct: 596 REVCISY 602


>gi|343172599|gb|AEL99003.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein, partial [Silene latifolia]
          Length = 592

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/548 (68%), Positives = 454/548 (82%), Gaps = 6/548 (1%)

Query: 49  RLKRLVVKAAARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKL 108
           RL+   V+AA+   G  R RR YR+SQ+ N L   PVK+ A+ V PAGVF++ +FVLWKL
Sbjct: 47  RLRYTSVRAASGSSG--RSRRAYRESQAQNPLPIGPVKEFATAVAPAGVFLALSFVLWKL 104

Query: 109 VEKLLMPKPSR----PSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAF 164
           V K+L+PKP +     +KP+     WS   G+NL    + K+ R+SK  L++FA+ELR+F
Sbjct: 105 VGKVLLPKPQKFTTAENKPSTPATKWSFAPGSNLFKNLSQKIERDSKLKLDDFARELRSF 164

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
             VDMSGRNFGD+GL FLAESL YN+  EEV F+ANGITAAG+KAFDG+LQSN  LKTLN
Sbjct: 165 RIVDMSGRNFGDDGLIFLAESLAYNKAVEEVDFSANGITAAGLKAFDGILQSNFFLKTLN 224

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LSGNPIGDEG KCLC+ILV N G+++LQL+S  L DEGAKAIA+LL+ NS L  +ELNNN
Sbjct: 225 LSGNPIGDEGAKCLCEILVSNTGIQKLQLNSTGLGDEGAKAIAQLLRKNSNLTAIELNNN 284

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            IDYSGF S+A ALLENSTIR+LHLNGNYGG LG  ALAKGLEGNKS+ ELHLHGN++G+
Sbjct: 285 TIDYSGFASIAGALLENSTIRALHLNGNYGGTLGVAALAKGLEGNKSVSELHLHGNAMGN 344

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           EG+R+LMSGLS+RKG++ +LDI NN I ++GAFH+AEY+K  KSLLW+N+YMNDIGDEGA
Sbjct: 345 EGVRSLMSGLSARKGRMTLLDISNNEIGSRGAFHIAEYVKKTKSLLWLNVYMNDIGDEGA 404

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           EKIADALKQNR+ITTIDLGGNNIH++G + IA +LKDN+VIT+L++AYNP G DGAKA+S
Sbjct: 405 EKIADALKQNRSITTIDLGGNNIHARGITCIAEILKDNNVITTLEIAYNPFGPDGAKAIS 464

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           EVLKFHGN+ TLKLGWCQIG  GAEF+ADM++YN TIS LDLRANGL D+GA CLAQS K
Sbjct: 465 EVLKFHGNVKTLKLGWCQIGRQGAEFIADMIKYNTTISTLDLRANGLMDDGAVCLAQSLK 524

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           VVNEALTS+DL FNEIRD GAFAIAQALKANEDVA+TS+NL++NF+TK GQSALTDA D 
Sbjct: 525 VVNEALTSVDLGFNEIRDTGAFAIAQALKANEDVALTSINLSSNFITKLGQSALTDASDH 584

Query: 585 VYEMSEKE 592
           V EM+ KE
Sbjct: 585 VMEMNGKE 592


>gi|224100227|ref|XP_002311795.1| predicted protein [Populus trichocarpa]
 gi|222851615|gb|EEE89162.1| predicted protein [Populus trichocarpa]
          Length = 490

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/490 (78%), Positives = 425/490 (86%), Gaps = 6/490 (1%)

Query: 114 MPKPSRPSKPTAE------GMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSV 167
           MPKP+R S   AE      GM WS   GTNLLSGFT K+ RESKQ LNEFAK+LRAF SV
Sbjct: 1   MPKPARSSLSAAENKSPEKGMKWSFAPGTNLLSGFTAKVDRESKQKLNEFAKQLRAFRSV 60

Query: 168 DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           DMSG NFGDEGLFFLAESL YNQ  EEVSFAANGITA G KAFD VLQSNI+LKTLN+SG
Sbjct: 61  DMSGCNFGDEGLFFLAESLAYNQILEEVSFAANGITAEGTKAFDRVLQSNISLKTLNISG 120

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           NPIGDEG K LC+ILVDN G+E+LQL+S DL DEGAKAIA+LLK +S LRV+ELNNNMID
Sbjct: 121 NPIGDEGAKILCEILVDNVGIEKLQLNSADLGDEGAKAIADLLKKSSTLRVVELNNNMID 180

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
           YSGFTSLA ALLEN+ +RS++LNGNYGGALGANALAKGLEGNKSLRELHL GNSIGDEG+
Sbjct: 181 YSGFTSLAGALLENNAVRSIYLNGNYGGALGANALAKGLEGNKSLRELHLQGNSIGDEGV 240

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
           RALMSGLSS K KL  LDIGNNSISAKGAFHVAEY+K  KSL W+N+YMNDIGDEGAEKI
Sbjct: 241 RALMSGLSSTKAKLTHLDIGNNSISAKGAFHVAEYVKKSKSLFWLNMYMNDIGDEGAEKI 300

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           ADALKQNR+I  IDLGGNNIH+KG S IA+VLKDN+VIT+L++ YNP G DG K LSE+L
Sbjct: 301 ADALKQNRSIAIIDLGGNNIHAKGISEIAQVLKDNTVITTLEIGYNPFGPDGMKVLSEIL 360

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
           KFHGN+  LKLGWCQIGA G+E++AD L+YNNTISILDLR NGLRDEGA CLA+S KVVN
Sbjct: 361 KFHGNVKALKLGWCQIGAKGSEYIADTLKYNNTISILDLRGNGLRDEGAVCLARSLKVVN 420

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYE 587
           E LT +DL FNEIRDDGAFAIAQALK+NEDV +TSLNL NNFLTKFGQSALTDA+D VYE
Sbjct: 421 EVLTELDLGFNEIRDDGAFAIAQALKSNEDVKITSLNLGNNFLTKFGQSALTDARDHVYE 480

Query: 588 MSEKEVNIFF 597
           M+EKEVNI F
Sbjct: 481 MNEKEVNIVF 490


>gi|343172597|gb|AEL99002.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein, partial [Silene latifolia]
          Length = 592

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/548 (68%), Positives = 454/548 (82%), Gaps = 6/548 (1%)

Query: 49  RLKRLVVKAAARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKL 108
           RL+   V+AA+   G  R RR YR+SQ+ N L   PVK+ A+ V PAGVF++ +FVLWKL
Sbjct: 47  RLRYTSVRAASGSSG--RSRRAYRESQAQNPLPIGPVKEFATAVAPAGVFLALSFVLWKL 104

Query: 109 VEKLLMPKPSR----PSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAF 164
           V K+L+PKP +     +KP+     WS   G+NL    + K+ R+SK  L++FA+ELR+F
Sbjct: 105 VGKVLLPKPQKFTTAENKPSTPATKWSFAPGSNLFKNLSQKIERDSKLKLDDFARELRSF 164

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
             VDMSGRNFGD+GL FLAESL YN+  EEV F+ANGITAAG+KAFDG+LQSN  LKTLN
Sbjct: 165 RIVDMSGRNFGDDGLIFLAESLAYNKAVEEVDFSANGITAAGLKAFDGILQSNFFLKTLN 224

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LSGNPIGDEG KCLC+ILV N G+++LQL+S  L DEGAKAIAELL+ NS L  +ELNNN
Sbjct: 225 LSGNPIGDEGAKCLCEILVSNTGLQKLQLNSTGLGDEGAKAIAELLRKNSNLTAIELNNN 284

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            IDYSGF S++ ALLENSTIR+LHLNGNYGGALG  ALAKGLEGNKS+ ELHLHGN++G+
Sbjct: 285 TIDYSGFASISGALLENSTIRALHLNGNYGGALGVAALAKGLEGNKSVSELHLHGNAMGN 344

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           EG+R+LM GLS+RKG++ +LDI NN I ++GAFH+AEY+K  KSLLW+N+YMNDIGDEGA
Sbjct: 345 EGVRSLMLGLSARKGRMTLLDISNNEIGSRGAFHIAEYVKKTKSLLWLNVYMNDIGDEGA 404

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           EKIADALKQNR+ITTIDLGGNNIH++G + IA +LKDN+VIT+L++AYNP G DGAKA+S
Sbjct: 405 EKIADALKQNRSITTIDLGGNNIHARGITCIAEILKDNNVITTLEIAYNPFGPDGAKAIS 464

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           EVLKFHGN+ TLKLGWCQIG  GAEF+ADM++YN TIS LDLRANGL D+GA CLAQS K
Sbjct: 465 EVLKFHGNVKTLKLGWCQIGRQGAEFIADMIKYNTTISTLDLRANGLMDDGAVCLAQSLK 524

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           VVNEALTS+DL FNEIRD GAFAIAQALKANEDVA+TS+NL++NF+TK GQSALTDA D 
Sbjct: 525 VVNEALTSVDLGFNEIRDTGAFAIAQALKANEDVALTSINLSSNFITKLGQSALTDASDH 584

Query: 585 VYEMSEKE 592
           V EM+ KE
Sbjct: 585 VMEMNGKE 592


>gi|5091543|gb|AAD39572.1|AC007067_12 T10O24.12 [Arabidopsis thaliana]
          Length = 681

 Score =  765 bits (1976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/694 (59%), Positives = 481/694 (69%), Gaps = 116/694 (16%)

Query: 3   STSTISLYSHPKLSHRAQPVLSRSFCQARDAPLSFALPFSGTRRCFRLKRLVVKAAARPE 62
           STS+++L+S PK+      +L+R F            P     R  RL    +KAA   +
Sbjct: 5   STSSLNLHSLPKV-----ILLNRLFVS----------PVVIHHRSPRLP--AIKAAYNSD 47

Query: 63  GGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATF------------------- 103
           GG ++ RVY++SQ+ +    A V+QIAS V+P G F   TF                   
Sbjct: 48  GGSKRSRVYKESQAASGFPNAKVQQIASSVLPLGSFAVVTFGTSIARRASFVYPSLLKTW 107

Query: 104 -VLWKLVEKLLMPKPSRPS----KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFA 158
            +LWK+V K + PK  + S      + +G+ WS+GAGTNLL GF  K+ RE+KQ LNEFA
Sbjct: 108 TILWKVVGKFMSPKSPKTSAGENNSSTQGVKWSIGAGTNLLQGFAAKVDREAKQRLNEFA 167

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           KELR+F SVDMSG NFGDEGLFFLAESLGYNQT EEVSF+ANGITAAG+KAFDGVLQSNI
Sbjct: 168 KELRSFRSVDMSGCNFGDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGVLQSNI 227

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            LK LNLSGNPIGDEG K LC  L++N+ +E LQL+S D+ DEGAK IAELLK NS LR+
Sbjct: 228 MLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRI 287

Query: 279 LELNNNMIDY--SGFTSLAEALLENSTIRSLHLN-GNYGGALGANALAKGLEGNKSLREL 335
           +ELNNNMIDY  S F S    L    T +   LN GNYGGALGANALAKGLEGNKSLREL
Sbjct: 288 IELNNNMIDYSVSFFCSCVVQLYFRLTYQVYELNLGNYGGALGANALAKGLEGNKSLREL 347

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           HLHGNSIGDEG RALM+GLSS KGK+A+LD+GNNSISAKGAF+VAEYIK  KSL+W+NLY
Sbjct: 348 HLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAKGAFYVAEYIKRSKSLVWLNLY 407

Query: 396 MNDIGDE---------------------------------------GAEKIADALKQNRT 416
           MNDIGDE                                       GAEKIAD+LKQNR+
Sbjct: 408 MNDIGDEVHIYPIYNNNLDCVCASLISENLVSFCSVVYLKDFQWFQGAEKIADSLKQNRS 467

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I TIDLGGNNIH++G +AIA+ LKDN++IT+L++ YNPIG DGAKALSE+LKFHGN+ TL
Sbjct: 468 IATIDLGGNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTL 527

Query: 477 KLGWC---------------------------------QIGASGAEFVADMLRYNNTISI 503
           KLGWC                                 QI A GAE VADMLRYNNTIS+
Sbjct: 528 KLGWCQVKPVHNSLSRNKSISSQLLISFCHGSFHFLFLQIAAKGAEHVADMLRYNNTISV 587

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           LDLRANGLRDEGA CLA+S KVVNEALTS+DL FNEIRDDGAFAIAQALKANEDV VTS+
Sbjct: 588 LDLRANGLRDEGASCLARSLKVVNEALTSVDLGFNEIRDDGAFAIAQALKANEDVTVTSI 647

Query: 564 NLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
           NL NNF+TKFGQSALTDA+D V EM+EKEV IFF
Sbjct: 648 NLGNNFITKFGQSALTDARDHVLEMTEKEVEIFF 681


>gi|147788465|emb|CAN61184.1| hypothetical protein VITISV_031253 [Vitis vinifera]
          Length = 629

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/609 (61%), Positives = 428/609 (70%), Gaps = 102/609 (16%)

Query: 3   STSTISLYSHP-------------------KLSHRAQPVLSRS---------FCQARDAP 34
           STS I LYSHP                   ++SHRA+P   RS         +C     P
Sbjct: 5   STSAICLYSHPMVLSSSSSQSPNLTFYSDSQISHRARPRNLRSQVLGSSWWGYCAL--LP 62

Query: 35  LSFALPFSGTRRCFRLKRLVVKAAARPEGGRRQ----RRVYRQSQSDNALTTAPVKQIAS 90
            S    +  + R +R + LV  AA+  +G  R+    RRV++QSQ    L+  PV++IAS
Sbjct: 63  TSV---YVSSIRHYRFRTLVTVAASTADGVPRRPVSGRRVFKQSQGQGPLSPVPVREIAS 119

Query: 91  FVVPAGVFVSATFVLWKLVEKLLMPKPSRPSKPTA----EGMNWSVGAGTNLLSGFTGKL 146
           FVVPA +F + TFVLW+LVEK+L+PK SR S         G+ WS   GTNLL+G T K 
Sbjct: 120 FVVPASLFFAVTFVLWRLVEKILLPKSSRSSSLEKKSSSPGVKWSFAPGTNLLAGLTAKF 179

Query: 147 FRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
            RESKQ LNEFAKE+R+F SVDMS                                  AG
Sbjct: 180 DRESKQKLNEFAKEIRSFGSVDMS----------------------------------AG 205

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           +KAFDGVLQSNI LKTL+LSGNPIGDEG KCLCDIL+DNAG+++LQL+S DL DEGAKAI
Sbjct: 206 LKAFDGVLQSNIVLKTLDLSGNPIGDEGAKCLCDILIDNAGIQKLQLNSADLGDEGAKAI 265

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE+LK NS LR++ELNNNMIDYSGFTSL  ALLEN+TIR++HLNGNYGGALG  ALAKGL
Sbjct: 266 AEMLKKNSSLRIVELNNNMIDYSGFTSLGGALLENNTIRNIHLNGNYGGALGVAALAKGL 325

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           E NKSLRELHLHGNSIGDEG+R LMSGLSS KGKL +LDIGNN IS++GAFHVAE  K  
Sbjct: 326 EANKSLRELHLHGNSIGDEGVRVLMSGLSSHKGKLTLLDIGNNEISSRGAFHVAEXXKKA 385

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           KSLLW+NLYMNDIGDEGAEKIADALK+NR+I TIDLGGNNIH+KG S IA VLKDN+VIT
Sbjct: 386 KSLLWLNLYMNDIGDEGAEKIADALKENRSIATIDLGGNNIHAKGVSKIAGVLKDNTVIT 445

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           +L+L YNPIG +GAKALSEVLKFHG I TLKLGWCQIGA GAEF+AD L+YN TIS LDL
Sbjct: 446 TLELGYNPIGPEGAKALSEVLKFHGKIKTLKLGWCQIGAKGAEFIADTLKYNTTISTLDL 505

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
           RANGLRDE                           D+GAFAIAQALKANEDVAVTSLNLA
Sbjct: 506 RANGLRDE---------------------------DEGAFAIAQALKANEDVAVTSLNLA 538

Query: 567 NNFLTKFGQ 575
           +NFLTKFGQ
Sbjct: 539 SNFLTKFGQ 547



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 90/190 (47%), Gaps = 2/190 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N IGDEGA+ + D L  N  I  + L   ++  +GA AIA +LK NS +  ++L 
Sbjct: 222 LDLSGNPIGDEGAKCLCDILIDNAGIQKLQLNSADLGDEGAKAIAEMLKKNSSLRIVELN 281

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I   G  +L   L  +  I  + L     GA G   +A  L  N ++  L L  N +
Sbjct: 282 NNMIDYSGFTSLGGALLENNTIRNIHLNGNYGGALGVAALAKGLEANKSLRELHLHGNSI 341

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            DEG + L          LT +D+  NEI   GAF +A+  K  +  ++  LNL  N + 
Sbjct: 342 GDEGVRVLMSGLSSHKGKLTLLDIGNNEISSRGAFHVAEXXKKAK--SLLWLNLYMNDIG 399

Query: 572 KFGQSALTDA 581
             G   + DA
Sbjct: 400 DEGAEKIADA 409


>gi|357118248|ref|XP_003560868.1| PREDICTED: protein NLRC3-like [Brachypodium distachyon]
          Length = 614

 Score =  691 bits (1782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/601 (57%), Positives = 452/601 (75%), Gaps = 17/601 (2%)

Query: 13  PKLSHRAQPVLSRSFCQARDAPLSFAL---PFSGTRRCFRLKRLV------VKAAARPEG 63
           P L   +     R  C    +PLS  L   P    RR     R V      + +   P G
Sbjct: 15  PSLLAPSSRAYRRHACFG-SSPLSRCLLPSPPPRARRWTMAPRAVSEVFDGIHSQHNPPG 73

Query: 64  ---GRRQRRVYRQSQSDNALTTAPV--KQIASFVVPAGVFVSATFVLWKLVEKLL--MPK 116
              G  +R+ YR+ Q + A     V  + +  ++VPAG  ++ +FV+W++V   L    K
Sbjct: 74  VGRGGARRKAYREVQGEPAAPPLAVPARGVTGYIVPAGALLALSFVVWRVVLNFLPGKKK 133

Query: 117 PSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGD 176
               ++PT+ G+ WS  AG+NL +  + K  +ESK+ LN F KELR   +V+M+GR FGD
Sbjct: 134 DRTSAEPTSSGIMWSFAAGSNLSTSTSFKAEKESKKNLNRFYKELRTLKNVNMAGRQFGD 193

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
           EGLFFLAESL YN++AEEV F+ N ITA GI+AFDG+LQ N ALKTLNLSGN IGDEG K
Sbjct: 194 EGLFFLAESLAYNKSAEEVDFSGNAITAVGIEAFDGILQINTALKTLNLSGNAIGDEGAK 253

Query: 237 CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
           CL  ILV+N G+++L L+S ++ DEGAKAI+++LK N  +R+++L+NN+I+YSGF S+AE
Sbjct: 254 CLSGILVENVGIQKLLLNSTNIGDEGAKAISDMLKKNKTIRIVQLSNNVIEYSGFASIAE 313

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           ALLEN+ +RSL+LNGNYGG LGA++LAKG+ GNKSLRELHLHGN   +EG+R LMS LSS
Sbjct: 314 ALLENNALRSLYLNGNYGGPLGASSLAKGVVGNKSLRELHLHGNGFVNEGLRVLMSALSS 373

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
            KGK+ VLDIGNN+I+++G+ +VA++IK  KSL W++LYMND+GDEGAEK+ADALKQN+T
Sbjct: 374 HKGKITVLDIGNNNITSEGSLYVADFIKRTKSLRWLSLYMNDVGDEGAEKVADALKQNQT 433

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I+T+D GGNNIHS+G +AIA  LK+N+V+T+L+L+YNPIG +G KAL +VLKF G + TL
Sbjct: 434 ISTMDFGGNNIHSRGVTAIAETLKENAVLTTLELSYNPIGPEGVKALCDVLKFDGKLQTL 493

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
           KLGWCQIG SGAEF+AD L+ N T+S LDLRANGL D+GA CLA+S K +NE+L S+DL 
Sbjct: 494 KLGWCQIGVSGAEFIADCLKCNTTLSTLDLRANGLGDDGAICLARSLKTINESLKSLDLG 553

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIF 596
           FNEIRDDGAFA+AQALKANED+A+TSLNLANNF  KFGQ ALT+A+D VYEMSEKE++I+
Sbjct: 554 FNEIRDDGAFALAQALKANEDLAITSLNLANNFFGKFGQVALTEARDHVYEMSEKEIDIY 613

Query: 597 F 597
           F
Sbjct: 614 F 614


>gi|242095286|ref|XP_002438133.1| hypothetical protein SORBIDRAFT_10g008560 [Sorghum bicolor]
 gi|241916356|gb|EER89500.1| hypothetical protein SORBIDRAFT_10g008560 [Sorghum bicolor]
          Length = 614

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/547 (62%), Positives = 432/547 (78%), Gaps = 12/547 (2%)

Query: 60  RPEGGRR---QRRVYRQSQSDNALTTAPV--KQIASFVVPAGVFVSATFVLWKLVEKLLM 114
           RP G  R    RR YR++Q + A+       +++A + VP G  +  +FV+WK+V+ ++ 
Sbjct: 71  RPPGTGRGGAPRRSYREAQGEAAVPPLAAAARKVAPYAVPVGAVLMLSFVIWKVVQNMIP 130

Query: 115 PKP----SRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMS 170
            K     S  S P+  G+ WS  AG+NL S  T    +ES++ LN+F KE+R   +V+M+
Sbjct: 131 GKKKDQNSGESAPS--GIMWSFAAGSNL-STPTLSAEKESRKNLNKFYKEIRTSKTVNMA 187

Query: 171 GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPI 230
           GR FGDEGLFFLAESL YN++AEEV F+ NGITA GI+AFDG+LQ N  LKTLNLSGN I
Sbjct: 188 GRQFGDEGLFFLAESLAYNKSAEEVDFSGNGITAVGIEAFDGILQINTTLKTLNLSGNDI 247

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           GDEG KCL DILV+N G+++L L+S+++ DEGAKAI+ +LK N  +R L+L+NN IDYSG
Sbjct: 248 GDEGAKCLSDILVENFGIQKLLLNSINIGDEGAKAISNMLKKNKSIRFLQLSNNTIDYSG 307

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           F S+AE LLEN+ IRSL+LNGNYGG LGA++LA+G+ GNKSLRE+HLHGN IG+EGIR L
Sbjct: 308 FASIAEGLLENNLIRSLYLNGNYGGPLGASSLAQGILGNKSLREIHLHGNGIGNEGIREL 367

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           MS LS+ KGK+ ++DIGNN+IS +G   VA ++K  KSL W +L MNDI DEGAEK+A+A
Sbjct: 368 MSALSAHKGKITIVDIGNNNISPEGLRPVASFLKRTKSLQWFSLCMNDISDEGAEKVAEA 427

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           LK N+TI+TIDLGGNNIHSKG S IA  LKDN+V+T+LDL+YNPIG+DG KAL +VLKFH
Sbjct: 428 LKDNKTISTIDLGGNNIHSKGVSVIAETLKDNAVLTTLDLSYNPIGSDGVKALCDVLKFH 487

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEAL 530
           G I TLKLGWCQIG  GAE +AD L+YN T+S LDLRANGL D+GA CLA+SFK++NE+L
Sbjct: 488 GKIQTLKLGWCQIGVEGAECIADCLKYNTTLSTLDLRANGLGDDGAICLARSFKIINESL 547

Query: 531 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
           TS+DL FNEIRDDGAFA+AQALKANED+AVTSLNLANNF TKFGQ AL++A+D V+EM E
Sbjct: 548 TSLDLGFNEIRDDGAFALAQALKANEDLAVTSLNLANNFFTKFGQVALSEARDHVFEMHE 607

Query: 591 KEVNIFF 597
           KE++I+F
Sbjct: 608 KEIDIYF 614


>gi|413952546|gb|AFW85195.1| hypothetical protein ZEAMMB73_319583 [Zea mays]
          Length = 615

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/571 (60%), Positives = 438/571 (76%), Gaps = 19/571 (3%)

Query: 45  RRCFRLKRLVVKAAA-----------RPEG---GRRQRRVYRQSQSDNALTTAPVKQIAS 90
           R   RL R V +A++           RP G   G  +RR YR++Q + A+        A 
Sbjct: 46  RGSRRLGRAVPRASSEAFGDGFRSQDRPPGVSSGGVRRRTYREAQGEAAVPPVAAAARAV 105

Query: 91  FVV--PAGVFVSATFVLWKLVEKLL--MPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKL 146
                P G  +  +FV+WK+V+ ++    K     K    G+ WS  AG+NL +  T   
Sbjct: 106 APYVAPVGAVLMLSFVIWKVVQNMIPGKKKDHGSGKHAPSGIMWSFAAGSNLATS-TLSA 164

Query: 147 FRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
            +ES++ LN+F KELR   +V+M+GR FGDEGLFFLAESL Y+++AEEV F+ NGITA G
Sbjct: 165 EKESRKNLNKFYKELRTLKTVNMAGRQFGDEGLFFLAESLAYDKSAEEVDFSGNGITAVG 224

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           I+AFDGVLQ N  LKTLNLSGN IGDEG KCL DILV+N G+++L L+S+++ DEGAKA+
Sbjct: 225 IEAFDGVLQINTTLKTLNLSGNDIGDEGAKCLSDILVENVGIQKLLLNSINIGDEGAKAL 284

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           + +LK N  +R+L+ +NN I+YSGF S+AEALLEN+TIRSL+LNGNYGG LGA +LA+G+
Sbjct: 285 SNMLKKNKSIRILQFSNNAIEYSGFASIAEALLENNTIRSLYLNGNYGGPLGACSLAQGI 344

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
            GNKSLRE+HLHGN IG+EGIR LMS LS+ KGK+ V+DIGNN+IS +G   VAE++K  
Sbjct: 345 LGNKSLREIHLHGNGIGNEGIRELMSALSAHKGKITVVDIGNNNISPEGLHPVAEFLKRT 404

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           KSL W +LYMNDI DEGAEK+A+ALK N+TI+TIDLGGNNIHSK  SA+A  LKDN+V+T
Sbjct: 405 KSLQWFSLYMNDISDEGAEKVAEALKDNKTISTIDLGGNNIHSKAVSAVAETLKDNAVLT 464

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           +LDL+YNPIG+DG KAL +VLKFHG I TLKLGWCQIG  GAE +AD L+YN T+S LDL
Sbjct: 465 TLDLSYNPIGSDGVKALCDVLKFHGKIQTLKLGWCQIGMEGAECIADCLKYNTTLSTLDL 524

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
           RANGL ++GA CLA+SFK++NE+LTS+DL FNEIRDDGAFA+AQALKANED+AVTSLNLA
Sbjct: 525 RANGLGNDGAICLARSFKIINESLTSLDLGFNEIRDDGAFALAQALKANEDLAVTSLNLA 584

Query: 567 NNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
           NNF TKFGQ AL++A+D VYEM+E+E++I+F
Sbjct: 585 NNFFTKFGQVALSEARDHVYEMTEREIDIYF 615


>gi|222635277|gb|EEE65409.1| hypothetical protein OsJ_20746 [Oryza sativa Japonica Group]
          Length = 873

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/485 (67%), Positives = 406/485 (83%), Gaps = 2/485 (0%)

Query: 101 ATFVLWKLVEKLLMPKPSRPS--KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFA 158
           A  V+W++V+ LL  K    S  + T  G+ WS  AG+NL +  +    +ES++ LN+F 
Sbjct: 105 ARTVIWRVVQNLLPGKTKDQSSGESTPSGIMWSFAAGSNLSTSASFNAEKESRKNLNKFY 164

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           KE+R   +V+M+GR FGDEGLFFLAESL YN++AEEV F+ NGITA GI+AFDG+LQ N 
Sbjct: 165 KEIRTLKNVNMAGRQFGDEGLFFLAESLAYNKSAEEVDFSGNGITAVGIEAFDGILQINT 224

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           ALK+LNLSGN IGDEG KCL DILV+N G+++L L+S ++ DEGAKAI+++LK N  +R 
Sbjct: 225 ALKSLNLSGNAIGDEGAKCLSDILVENVGIQKLLLNSTNIGDEGAKAISDMLKKNKTIRT 284

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+NN I+YSGF S+AEALLEN+ +RSL +NGNYGG LGA++LAKG+ GNK+LRELHLH
Sbjct: 285 LQLSNNTIEYSGFASIAEALLENNVLRSLFVNGNYGGPLGASSLAKGILGNKTLRELHLH 344

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           GN  G+EG+RALMS LS+ KGK+ VLDIGNN+I+++G+ HVAE+IK  KSLLW++LYMND
Sbjct: 345 GNGFGNEGVRALMSALSAHKGKITVLDIGNNNITSEGSLHVAEFIKRTKSLLWLSLYMND 404

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEGAEK+ADALKQN+TI+T+DLGGNNIHSKG SAIA  LKDNSV+T+L+L+YNPIG +
Sbjct: 405 ISDEGAEKVADALKQNKTISTVDLGGNNIHSKGVSAIAETLKDNSVVTTLELSYNPIGPE 464

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           G KAL +VLKF+G I TLKLGWCQIG SGAEFVAD L+YN T+S LDLRANGL D+GA C
Sbjct: 465 GVKALCDVLKFNGKIQTLKLGWCQIGVSGAEFVADCLKYNTTLSTLDLRANGLGDDGAIC 524

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           LA+SFK++NE+LTS+DL FNEIRDDGAFA+AQALKANED+AVTSLNLANNF TKFGQ AL
Sbjct: 525 LARSFKIINESLTSLDLGFNEIRDDGAFALAQALKANEDLAVTSLNLANNFFTKFGQVAL 584

Query: 579 TDAKD 583
           ++A+D
Sbjct: 585 SEARD 589


>gi|51535809|dbj|BAD37894.1| deliriumA-like [Oryza sativa Japonica Group]
          Length = 628

 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/526 (62%), Positives = 417/526 (79%), Gaps = 17/526 (3%)

Query: 67  QRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPKPSRPS--KPT 124
           + RV +      A   A V+ ++ +VVPA   ++ +FV+W++V+ LL  K    S  + T
Sbjct: 82  EYRVEQGEAPPAAAAAAAVRGVSPYVVPAAAVLALSFVIWRVVQNLLPGKTKDQSSGEST 141

Query: 125 AEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAE 184
             G+ WS  AG+NL +  +    +ES++ LN+F KE+R   +V+M+GR FGDEGLFFLAE
Sbjct: 142 PSGIMWSFAAGSNLSTSASFNAEKESRKNLNKFYKEIRTLKNVNMAGRQFGDEGLFFLAE 201

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           SL YN++AEEV F+ NGITA GI+AFDG+LQ N ALK+LNLSGN IGDEG KCL DILV+
Sbjct: 202 SLAYNKSAEEVDFSGNGITAVGIEAFDGILQINTALKSLNLSGNAIGDEGAKCLSDILVE 261

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N G+++L L+S ++ DEGAKAI+++LK N  +R L+L+NN I+YSGF S+AEALLEN+ +
Sbjct: 262 NVGIQKLLLNSTNIGDEGAKAISDMLKKNKTIRTLQLSNNTIEYSGFASIAEALLENNVL 321

Query: 305 RSLHL---------------NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           RSL +               +GNYGG LGA++LAKG+ GNK+LRELHLHGN  G+EG+RA
Sbjct: 322 RSLFVKLVAHNPVALYVIYDDGNYGGPLGASSLAKGILGNKTLRELHLHGNGFGNEGVRA 381

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           LMS LS+ KGK+ VLDIGNN+I+++G+ HVAE+IK  KSLLW++LYMNDI DEGAEK+AD
Sbjct: 382 LMSALSAHKGKITVLDIGNNNITSEGSLHVAEFIKRTKSLLWLSLYMNDISDEGAEKVAD 441

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           ALKQN+TI+T+DLGGNNIHSKG SAIA  LKDNSV+T+L+L+YNPIG +G KAL +VLKF
Sbjct: 442 ALKQNKTISTVDLGGNNIHSKGVSAIAETLKDNSVVTTLELSYNPIGPEGVKALCDVLKF 501

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +G I TLKLGWCQIG SGAEFVAD L+YN T+S LDLRANGL D+GA CLA+SFK++NE+
Sbjct: 502 NGKIQTLKLGWCQIGVSGAEFVADCLKYNTTLSTLDLRANGLGDDGAICLARSFKIINES 561

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
           LTS+DL FNEIRDDGAFA+AQALKANED+AVTSLNLANNF TKFGQ
Sbjct: 562 LTSLDLGFNEIRDDGAFALAQALKANEDLAVTSLNLANNFFTKFGQ 607


>gi|218197870|gb|EEC80297.1| hypothetical protein OsI_22316 [Oryza sativa Indica Group]
          Length = 618

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 309/534 (57%), Positives = 400/534 (74%), Gaps = 40/534 (7%)

Query: 86  KQIASFVVPAGVFVSATF--------------------VLWKLVEKLLMPKPSRPS--KP 123
           + +A +VVPA   ++ +F                    V+W++V+ LL  K    S  + 
Sbjct: 103 RGVAPYVVPAAAVLALSFEHVIFSAVCGINTNSLFQRTVIWRVVQNLLPGKTKDQSSGES 162

Query: 124 TAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLA 183
           T  G+ WS  AG+NL +  +    +ES++ LN+F KE+R   +V+M+GR FGDEGLFFLA
Sbjct: 163 TPSGIMWSFAAGSNLSTSTSFNAEKESRKNLNKFYKEIRTLKNVNMAGRQFGDEGLFFLA 222

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           ESL YN++AEEV F+ NGITA GI+AFDG+LQ N ALK+LNLSGN IGDEG KCL DILV
Sbjct: 223 ESLAYNKSAEEVDFSGNGITAVGIEAFDGILQINTALKSLNLSGNAIGDEGAKCLSDILV 282

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           +N G+++L L+S ++ DEGAKAI+++LK N  +R L+L+NN I+YSGF S+AEALLEN+ 
Sbjct: 283 ENVGIQKLLLNSTNIGDEGAKAISDMLKKNKTIRTLQLSNNTIEYSGFASIAEALLENNV 342

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           +RSL +       +  N +A  +  ++   E+ L     G + I           GK+ V
Sbjct: 343 LRSLFVK-----LVAHNPVALYVIYDECAYEVVLR--YCGSDYI-----------GKITV 384

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LDIGNN+I+++G+ HVAE+IK  KSLLW++LYMNDI DEGAEK+ADALKQN+TI+T+D+G
Sbjct: 385 LDIGNNNITSEGSLHVAEFIKRTKSLLWLSLYMNDISDEGAEKVADALKQNKTISTVDVG 444

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GNNIHSKG SAIA  LKDNSV+T+L+L+YNPIG +G KAL +VLKF+G I TLKLGWCQI
Sbjct: 445 GNNIHSKGVSAIAETLKDNSVVTTLELSYNPIGPEGVKALCDVLKFNGKIQTLKLGWCQI 504

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G SGAEFVAD L+YN T+S LDLRANGL D+GA CLA+SFK++NE+LTS+DL FNEIRDD
Sbjct: 505 GVSGAEFVADCLKYNTTLSTLDLRANGLGDDGAICLARSFKIINESLTSLDLGFNEIRDD 564

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
           GAFA+AQALKANED+AVTSLNLANNF TKFGQ AL++A++ VYEMSEKE++IFF
Sbjct: 565 GAFALAQALKANEDLAVTSLNLANNFFTKFGQVALSEAREHVYEMSEKEIDIFF 618


>gi|168024089|ref|XP_001764569.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684147|gb|EDQ70551.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 471

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 293/455 (64%), Positives = 358/455 (78%), Gaps = 2/455 (0%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K  RES   LNEF++ELR F  VD++G+ FGDEG  +LAE L +NQ+AE V F+ANGITA
Sbjct: 17  KFRRESMAKLNEFSRELRTFREVDLAGKGFGDEGFVYLAEGLAFNQSAESVDFSANGITA 76

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            GIKA   VL +N  LKTLNLSGN IGDEG   L  +L  N G+ +LQL+S++L DEGAK
Sbjct: 77  TGIKALSQVLPANTFLKTLNLSGNSIGDEGAAELAGLLEKNQGITKLQLNSINLGDEGAK 136

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE+LK N  +  LELNNN++D++GF ++A+AL  N T+RS+ +N NYGGALG +A AK
Sbjct: 137 AIAEMLKKNEHITTLELNNNVVDFAGFAAIADALTTNKTLRSIQINNNYGGALGGSAFAK 196

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK-GKLAVLDIGNNSISAKGAFHVAEYI 383
           GL+ NKSLRELHLHGN +G+EGIR LM GL + K GK++ LDIGNN I  KGAFHVAEYI
Sbjct: 197 GLQENKSLRELHLHGNDMGNEGIRELMVGLMAHKAGKISNLDIGNNKIGPKGAFHVAEYI 256

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           K  KSL W+NLYMND GD+GAE+IA+ALK+NR+I TIDLGGNNI ++G + +A  LKDNS
Sbjct: 257 KKAKSLQWLNLYMNDFGDQGAERIAEALKRNRSIVTIDLGGNNISAEGTAHLAAALKDNS 316

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            IT+ + +YNPIG +GAK L++ LKFHG I TL+LGWCQIG  GAE +AD L YN TIS 
Sbjct: 317 TITTFEFSYNPIGMNGAKVLADTLKFHGKIETLRLGWCQIGVKGAEAIADCLLYNATIST 376

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           LDLRAN L D+GA  LA+S KVVNE LTS+DL FNEIRD GAFA+AQALKAN D AV++L
Sbjct: 377 LDLRANSLGDDGAALLAKSLKVVNEHLTSLDLGFNEIRDAGAFALAQALKANGDAAVSTL 436

Query: 564 NLANNFLTKFGQSALTDAKDLVYEMSE-KEVNIFF 597
           NL +NFLTK+GQ ALT+AKD V EM++ KEVNI+F
Sbjct: 437 NLTSNFLTKYGQVALTEAKDHVSEMNDGKEVNIYF 471


>gi|357486131|ref|XP_003613353.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula]
 gi|355514688|gb|AES96311.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula]
          Length = 355

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 279/353 (79%), Positives = 326/353 (92%)

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N+ +E+LQL+S DL DEGAKAIAE+LK NS LRVLELNNNMI+YSGFTSLA ALLEN++I
Sbjct: 3   NSTIEKLQLNSADLGDEGAKAIAEMLKKNSSLRVLELNNNMIEYSGFTSLAGALLENNSI 62

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           R++HLNGNYGGALG NALAK LEGNKS+RELHLHGNSIGDEGIR+LM+GL+S KGKL +L
Sbjct: 63  RNIHLNGNYGGALGVNALAKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSHKGKLTLL 122

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           DIGNNS++AKGAF+VA YIK  KSLLW+N+YMNDIGDEGAEK+ADALK+NR+ITT+D+GG
Sbjct: 123 DIGNNSLTAKGAFYVAGYIKKIKSLLWLNIYMNDIGDEGAEKLADALKENRSITTLDMGG 182

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           NNIH+ G  A+A+VLKDNSVIT+L+L+YNPIG DGAKAL+EV+KFHGN+ TLKLGWCQIG
Sbjct: 183 NNIHAVGVGAVAKVLKDNSVITTLELSYNPIGPDGAKALAEVIKFHGNVKTLKLGWCQIG 242

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
           A GAEF+AD L+YN TIS+LDLRANGLRDEGA CLA+S KVVNEALTS+DL FNEIRDDG
Sbjct: 243 AKGAEFIADALKYNTTISVLDLRANGLRDEGALCLARSLKVVNEALTSLDLGFNEIRDDG 302

Query: 545 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
           AFAIAQALK+NEDVAVTSLN+ +NFLTKFGQSAL+DA+D V+EM+EKE+ IFF
Sbjct: 303 AFAIAQALKSNEDVAVTSLNIGSNFLTKFGQSALSDARDHVFEMTEKEIAIFF 355



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 156/304 (51%), Gaps = 3/304 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + ++  + GDEG   +AE L  N +   +    N I  +G  +  G L  N +++ ++L+
Sbjct: 9   LQLNSADLGDEGAKAIAEMLKKNSSLRVLELNNNMIEYSGFTSLAGALLENNSIRNIHLN 68

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSILRVLELNNNM 285
           GN  G  GV  L   L  N  +  L L    + DEG +++   L  +   L +L++ NN 
Sbjct: 69  GNYGGALGVNALAKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSHKGKLTLLDIGNNS 128

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +   G   +A  + +  ++  L++  N  G  GA  LA  L+ N+S+  L + GN+I   
Sbjct: 129 LTAKGAFYVAGYIKKIKSLLWLNIYMNDIGDEGAEKLADALKENRSITTLDMGGNNIHAV 188

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+ A+   L      +  L++  N I   GA  +AE IK   ++  + L    IG +GAE
Sbjct: 189 GVGAVAKVLKDNS-VITTLELSYNPIGPDGAKALAEVIKFHGNVKTLKLGWCQIGAKGAE 247

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKALS 464
            IADALK N TI+ +DL  N +  +GA  +AR LK  N  +TSLDL +N I  DGA A++
Sbjct: 248 FIADALKYNTTISVLDLRANGLRDEGALCLARSLKVVNEALTSLDLGFNEIRDDGAFAIA 307

Query: 465 EVLK 468
           + LK
Sbjct: 308 QALK 311



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 163/321 (50%), Gaps = 5/321 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + + E  K+  +   ++++       G   LA +L  N +   +    N   A G+ 
Sbjct: 19  EGAKAIAEMLKKNSSLRVLELNNNMIEYSGFTSLAGALLENNSIRNIHLNGNYGGALGVN 78

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIA 267
           A    L+ N +++ L+L GN IGDEG++ L   L  + G +  L + +  L  +GA  +A
Sbjct: 79  ALAKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSHKGKLTLLDIGNNSLTAKGAFYVA 138

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             +K    L  L +  N I   G   LA+AL EN +I +L + GN   A+G  A+AK L+
Sbjct: 139 GYIKKIKSLLWLNIYMNDIGDEGAEKLADALKENRSITTLDMGGNNIHAVGVGAVAKVLK 198

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            N  +  L L  N IG +G +AL   +    G +  L +G   I AKGA  +A+ +K   
Sbjct: 199 DNSVITTLELSYNPIGPDGAKALAEVIKFH-GNVKTLKLGWCQIGAKGAEFIADALKYNT 257

Query: 388 SLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNS--V 444
           ++  ++L  N + DEGA  +A +LK  N  +T++DLG N I   GA AIA+ LK N    
Sbjct: 258 TISVLDLRANGLRDEGALCLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNEDVA 317

Query: 445 ITSLDLAYNPIGADGAKALSE 465
           +TSL++  N +   G  ALS+
Sbjct: 318 VTSLNIGSNFLTKFGQSALSD 338


>gi|302773037|ref|XP_002969936.1| hypothetical protein SELMODRAFT_93050 [Selaginella moellendorffii]
 gi|300162447|gb|EFJ29060.1| hypothetical protein SELMODRAFT_93050 [Selaginella moellendorffii]
          Length = 475

 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 290/456 (63%), Positives = 355/456 (77%), Gaps = 1/456 (0%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           T K  +ES   + EF+KEL+ F   DMSGR FGDEG+  L+ SLGYN++ E   F+AN I
Sbjct: 20  TQKYIQESMSRIREFSKELQTFPEADMSGRKFGDEGIKILSSSLGYNKSLEYADFSANNI 79

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
           TA G       L++N  LKTLN+SGNPIGD+G   LCD L  N  +E+LQL+S ++ DEG
Sbjct: 80  TAVGSSEMRKYLRANSHLKTLNMSGNPIGDDGAGVLCDFLFTNGTLEKLQLNSCNISDEG 139

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           AK +A  LK+N  L VLELNNN IDY GF ++AEAL+ N TIR +HLNGNYGGALGA AL
Sbjct: 140 AKLLANALKSNQTLVVLELNNNTIDYPGFAAIAEALIVNKTIRGVHLNGNYGGALGALAL 199

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           AKGLE NK LRE+HLHGN +G+EGIR LM GL+S K KL+ LDIGNNSI  KG ++VAEY
Sbjct: 200 AKGLEQNKILREIHLHGNGMGNEGIRTLMEGLASSKAKLSSLDIGNNSIGPKGVYYVAEY 259

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K  KS+ W+NLYMNDIGDEGAEKIA+ALK+N+TI+TID+GGNNI + GA+ IA  LKDN
Sbjct: 260 MKKSKSIQWLNLYMNDIGDEGAEKIAEALKRNKTISTIDIGGNNITAAGATHIANALKDN 319

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S ITSL+++YNPIG DGAK L++ LK +GN+ TL+LGWCQIG  GA   A+ L+YN+T+S
Sbjct: 320 STITSLEMSYNPIGGDGAKILADTLKHNGNVQTLRLGWCQIGVKGAAAFAECLQYNSTMS 379

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            LDLRANGL DEGA  LA+S KVVNE LTS+DL FNEIRD+GAFA+AQALK N D AVT+
Sbjct: 380 TLDLRANGLGDEGAAILARSLKVVNETLTSLDLGFNEIRDNGAFALAQALKNNVDAAVTT 439

Query: 563 LNLANNFLTKFGQSALTDAKDLVYEMSE-KEVNIFF 597
           LNL NNF TK+G+ ALT+AK+ V E+ + KE+NIFF
Sbjct: 440 LNLMNNFFTKYGKVALTEAKEHVCEVQDGKEINIFF 475


>gi|302799292|ref|XP_002981405.1| hypothetical protein SELMODRAFT_154424 [Selaginella moellendorffii]
 gi|300150945|gb|EFJ17593.1| hypothetical protein SELMODRAFT_154424 [Selaginella moellendorffii]
          Length = 448

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 287/445 (64%), Positives = 350/445 (78%), Gaps = 1/445 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           + EF+KEL+ F   DMSGR FGDEG+  L+ SLGYN++ E   F+AN ITA G       
Sbjct: 4   IREFSKELQTFPEADMSGRKFGDEGIKILSSSLGYNKSLEYADFSANNITAVGSSEMRKY 63

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  LKTLN+SGNPIGD+G   LCD L  N  +E+LQL+S ++ DEGAK +A  LK+N
Sbjct: 64  LRANSHLKTLNMSGNPIGDDGAGVLCDFLFTNGTLEKLQLNSCNISDEGAKLLANALKSN 123

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L VLELNNN IDY GF ++AEAL+ N TIR +HLNGNYGGALGA ALAKGLE NK LR
Sbjct: 124 QTLVVLELNNNTIDYPGFAAIAEALIVNKTIRGVHLNGNYGGALGALALAKGLEQNKILR 183

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E+HLHGN +G+EGIR LM GL+S K KL+ LDIGNNSI  KG ++VAEY+K  KS+ W+N
Sbjct: 184 EIHLHGNGMGNEGIRTLMEGLASSKAKLSSLDIGNNSIGPKGVYYVAEYMKKSKSIQWLN 243

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           LYMNDIGDEGAEKIA+ALK+N+TI+TID+GGNNI + GA+ IA  LKDNS ITSL+++YN
Sbjct: 244 LYMNDIGDEGAEKIAEALKRNKTISTIDIGGNNITAAGATHIANALKDNSTITSLEMSYN 303

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           PIG DGAK L+E LK +GN+ TL+LGWCQIG  GA   A+ L+YN+T+S LDLRANGL D
Sbjct: 304 PIGGDGAKILAETLKHNGNVQTLRLGWCQIGVKGAAAFAECLQYNSTMSTLDLRANGLGD 363

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
           EGA  LA+S KVVNE LTS+DL FNEIRD+GAFA+AQALK N D AVT+LNL NNF TK+
Sbjct: 364 EGAAILARSLKVVNETLTSLDLGFNEIRDNGAFALAQALKNNVDAAVTTLNLMNNFFTKY 423

Query: 574 GQSALTDAKDLVYEMSE-KEVNIFF 597
           G+ ALT+AK+ V E+ + KE+NIFF
Sbjct: 424 GKVALTEAKEHVCEVQDGKEINIFF 448



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 29/182 (15%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + + E  K  +  S++D+ G N                            ITAAG  
Sbjct: 252 EGAEKIAEALKRNKTISTIDIGGNN----------------------------ITAAGAT 283

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                L+ N  + +L +S NPIG +G K L + L  N  V+ L+L    +  +GA A AE
Sbjct: 284 HIANALKDNSTITSLEMSYNPIGGDGAKILAETLKHNGNVQTLRLGWCQIGVKGAAAFAE 343

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLE 327
            L+ NS +  L+L  N +   G   LA +L + N T+ SL L  N     GA ALA+ L+
Sbjct: 344 CLQYNSTMSTLDLRANGLGDEGAAILARSLKVVNETLTSLDLGFNEIRDNGAFALAQALK 403

Query: 328 GN 329
            N
Sbjct: 404 NN 405


>gi|449486586|ref|XP_004157340.1| PREDICTED: protein NLRC3-like [Cucumis sativus]
          Length = 420

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/268 (76%), Positives = 237/268 (88%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K   ELHL+GNSIGDEG+R L+SGLSSRKGKLA+LDIGNNSI+AKGAFHVAE++K  KSL
Sbjct: 153 KEFLELHLNGNSIGDEGVRTLISGLSSRKGKLALLDIGNNSITAKGAFHVAEFVKRTKSL 212

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           + +NLYMNDIGDEGAEKIAD+LKQNRTI T+DLGGNNIH +G S +A+ LKDN  IT+L+
Sbjct: 213 VLLNLYMNDIGDEGAEKIADSLKQNRTIKTLDLGGNNIHGEGISKVAQALKDNDTITTLE 272

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           ++YNPIG +GA+ALSEVLKFHGN+  LKLGWC+IG  GAEF+A+ L+YN TIS+LDLR N
Sbjct: 273 ISYNPIGPEGAEALSEVLKFHGNVKNLKLGWCKIGPKGAEFIAETLKYNTTISVLDLRGN 332

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
           GLRDEGA CLA+S KVVNEALTS+DL FNEIRD GAFAIAQALKAN D+AVTSLNLANNF
Sbjct: 333 GLRDEGATCLARSLKVVNEALTSLDLGFNEIRDPGAFAIAQALKANGDIAVTSLNLANNF 392

Query: 570 LTKFGQSALTDAKDLVYEMSEKEVNIFF 597
           LTKFGQSALTDA+D V+EM E+EV I +
Sbjct: 393 LTKFGQSALTDARDHVHEMCEREVCISY 420



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 1/226 (0%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQ-TAEEVSFAANGITAAGIKAFDGVLQSNI 218
           E + F  + ++G + GDEG+  L   L   +     +    N ITA G       ++   
Sbjct: 151 ETKEFLELHLNGNSIGDEGVRTLISGLSSRKGKLALLDIGNNSITAKGAFHVAEFVKRTK 210

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           +L  LNL  N IGDEG + + D L  N  ++ L L   ++  EG   +A+ LK+N  +  
Sbjct: 211 SLVLLNLYMNDIGDEGAEKIADSLKQNRTIKTLDLGGNNIHGEGISKVAQALKDNDTITT 270

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           LE++ N I   G  +L+E L  +  +++L L     G  GA  +A+ L+ N ++  L L 
Sbjct: 271 LEISYNPIGPEGAEALSEVLKFHGNVKNLKLGWCKIGPKGAEFIAETLKYNTTISVLDLR 330

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           GN + DEG   L   L      L  LD+G N I   GAF +A+ +K
Sbjct: 331 GNGLRDEGATCLARSLKVVNEALTSLDLGFNEIRDPGAFAIAQALK 376



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 93/175 (53%), Gaps = 1/175 (0%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           EF K  ++   +++   + GDEG   +A+SL  N+T + +    N I   GI      L+
Sbjct: 204 EFVKRTKSLVLLNLYMNDIGDEGAEKIADSLKQNRTIKTLDLGGNNIHGEGISKVAQALK 263

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N  + TL +S NPIG EG + L ++L  +  V+ L+L    +  +GA+ IAE LK N+ 
Sbjct: 264 DNDTITTLEISYNPIGPEGAEALSEVLKFHGNVKNLKLGWCKIGPKGAEFIAETLKYNTT 323

Query: 276 LRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           + VL+L  N +   G T LA +L + N  + SL L  N     GA A+A+ L+ N
Sbjct: 324 ISVLDLRGNGLRDEGATCLARSLKVVNEALTSLDLGFNEIRDPGAFAIAQALKAN 378


>gi|303273528|ref|XP_003056125.1| leucine rich repeat-containing protein [Micromonas pusilla
           CCMP1545]
 gi|226462209|gb|EEH59501.1| leucine rich repeat-containing protein [Micromonas pusilla
           CCMP1545]
          Length = 705

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/450 (48%), Positives = 306/450 (68%), Gaps = 1/450 (0%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E K+ L +   +LR +S+VD+ GRN G+EG  +++E+L +N  A  V F+ANGI   G+ 
Sbjct: 256 EFKRVLRDMMGDLRRYSTVDLHGRNLGNEGAAYVSEALAFNDNATCVDFSANGIGDVGVV 315

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L+SN AL+ L+L+ N +GD     L + L  +  +  L L+S  + D+GA A+A+
Sbjct: 316 AICEALKSNHALEMLSLASNNLGDSATIQLAEYLKIDKTITTLNLNSSGIGDKGAAALAD 375

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +LK N+ L  LELNNN IDY G  SLAEAL+ENST+ +L L+GNY G +GA+ALA GL+ 
Sbjct: 376 MLKVNTTLSALELNNNSIDYEGTCSLAEALVENSTLETLSLSGNYVGRMGASALANGLKM 435

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N  ++ L L+GN IG+ GI+ L   LS R  KL  LD+GNN I  +     A+YIK    
Sbjct: 436 NSGIKGLFLNGNDIGNLGIQPLCRALSERDAKLTDLDVGNNGIGFEAGKFFADYIKQDSD 495

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  +NLYMN++ D GA +IA+AL  N  I  +D+GGNNI   GA A+A  LK N  + +L
Sbjct: 496 LTHLNLYMNELCDLGATEIANALSDNCAIEVLDIGGNNILDAGAMALAEALKVNKTLRTL 555

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           +L YNPIGA GA+A++E +KFH  + TL++GWC+I   GA ++AD ++YN  I  LDLR 
Sbjct: 556 ELGYNPIGARGAQAMAESVKFHSKVTTLRMGWCKITKDGAWYLADAIKYNEHICTLDLRG 615

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           N L DEG   LAQS +VVNE L S+DL +NEI+D+GAFA+AQA+K+N + A+ S+++ NN
Sbjct: 616 NELGDEGCTALAQSLQVVNENLISLDLGYNEIKDNGAFALAQAIKSNANGALQSISVNNN 675

Query: 569 FLTKFGQSALTDAKDLVYEMSE-KEVNIFF 597
           ++TKFG+ ALT+A +LV EM++ +E+ I F
Sbjct: 676 YITKFGEVALTEAVELVQEMNDSRELYIQF 705


>gi|145344673|ref|XP_001416852.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577078|gb|ABO95145.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 471

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/453 (46%), Positives = 306/453 (67%), Gaps = 1/453 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           + RE+K+ L +   ELR   +VD SG+N GDEG  F+AE+  YN  A  V  +ANGI   
Sbjct: 19  ITREAKRMLRDVMDELRRVQTVDASGKNLGDEGTCFIAEAFAYNNVATCVDMSANGIGVE 78

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G+ A    L+ N  L  L+L+ N +GDEG K L D L  +  +  + L++  + DEGA+A
Sbjct: 79  GVTALCEALKCNDTLTMLSLASNSLGDEGAKVLADYLKTDEKITTINLNACSIGDEGARA 138

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           IAE LK N+ +  LE+NNNM+DY G  +LA+A  +NST+  L L+GNY G LGA AL   
Sbjct: 139 IAEALKTNTTITSLEMNNNMVDYEGSGALAQAFAQNSTVELLALSGNYVGTLGAAALGAA 198

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
            + N  LR L L+GN IG+EG   L  GL++RK K+  LD+GNNSI  +    + +Y+K+
Sbjct: 199 FKENTGLRSLQLNGNDIGNEGCIKLCEGLAARKDKINNLDLGNNSIGPEAGPALRDYLKD 258

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             +L  +NLYMN++ ++G   +A++LK N+ I  +D+GGNNI + GA  +A  L+DN  +
Sbjct: 259 DDALTHLNLYMNELANDGCAAVAESLKDNKKIELLDIGGNNIGAFGAEKLAEALRDNESL 318

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            +L+L YNPIG  G KAL+E +KFHG +NT+++GWC+IG  G    AD ++Y++++++LD
Sbjct: 319 VTLELGYNPIGVPGGKALAETVKFHGKLNTMRMGWCKIGKEGGFAFADAIKYSSSLAVLD 378

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           LR N L D+G   LAQS  VVNE LT++DL +NEI+D GAFA+AQA+K N D ++ +L++
Sbjct: 379 LRGNDLGDDGVAALAQSLGVVNEVLTNLDLGYNEIKDKGAFALAQAIKNNADGSLQTLSI 438

Query: 566 ANNFLTKFGQSALTDAKDLVYEM-SEKEVNIFF 597
            NN+LTKFG+ ALT+A +LV EM +++++ + F
Sbjct: 439 NNNYLTKFGEVALTEAVELVQEMNADRDLYVQF 471



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 176/369 (47%), Gaps = 33/369 (8%)

Query: 138 LLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL----------- 186
           +LS  +  L  E  + L ++ K     ++++++  + GDEG   +AE+L           
Sbjct: 95  MLSLASNSLGDEGAKVLADYLKTDEKITTINLNACSIGDEGARAIAEALKTNTTITSLEM 154

Query: 187 -----------------GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP 229
                              N T E ++ + N +   G  A     + N  L++L L+GN 
Sbjct: 155 NNNMVDYEGSGALAQAFAQNSTVELLALSGNYVGTLGAAALGAAFKENTGLRSLQLNGND 214

Query: 230 IGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
           IG+EG   LC+ L      +  L L +  +  E   A+ + LK++  L  L L  N +  
Sbjct: 215 IGNEGCIKLCEGLAARKDKINNLDLGNNSIGPEAGPALRDYLKDDDALTHLNLYMNELAN 274

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++AE+L +N  I  L + GN  GA GA  LA+ L  N+SL  L L  N IG  G +
Sbjct: 275 DGCAAVAESLKDNKKIELLDIGGNNIGAFGAEKLAEALRDNESLVTLELGYNPIGVPGGK 334

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   +    GKL  + +G   I  +G F  A+ IK   SL  ++L  ND+GD+G   +A
Sbjct: 335 ALAETVKFH-GKLNTMRMGWCKIGKEGGFAFADAIKYSSSLAVLDLRGNDLGDDGVAALA 393

Query: 409 DALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNS--VITSLDLAYNPIGADGAKALSE 465
            +L   N  +T +DLG N I  KGA A+A+ +K+N+   + +L +  N +   G  AL+E
Sbjct: 394 QSLGVVNEVLTNLDLGYNEIKDKGAFALAQAIKNNADGSLQTLSINNNYLTKFGEVALTE 453

Query: 466 VLKFHGNIN 474
            ++    +N
Sbjct: 454 AVELVQEMN 462


>gi|255071059|ref|XP_002507611.1| predicted protein [Micromonas sp. RCC299]
 gi|226522886|gb|ACO68869.1| predicted protein [Micromonas sp. RCC299]
          Length = 559

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/445 (45%), Positives = 300/445 (67%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           ++  E K+ L +   E+R +++VD  GRN GD G  +++E+L +N  A  +  +ANG+  
Sbjct: 106 EIHGEFKRQLRDMMSEMRRYNTVDFHGRNLGDNGSAYISEALAFNDVATCIDLSANGMGE 165

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG+ A    L+SN AL+ L+L+ N + D G   L + L  ++ +  L L+S  + D GA 
Sbjct: 166 AGVFAICEALKSNSALEMLSLASNNLQDAGAVALANYLQSDSSINTLNLNSCGISDTGAI 225

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+AE+LK N+ L  LELNNN IDY G  ++AEAL EN+T+ +L ++GNY G LGA+ALAK
Sbjct: 226 ALAEMLKKNTSLVALELNNNNIDYEGTCAIAEALSENATLTTLSISGNYIGGLGASALAK 285

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           GL  NK L+ L ++GN IG+ G+ AL   +S+R+ KL  LD+GNN I  +   ++A YIK
Sbjct: 286 GLVKNKGLKGLIINGNDIGNIGVEALCKAISARETKLTNLDMGNNGIGHESGEYIAAYIK 345

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             K L  +NLYMN++ D GA  + +AL+QN  I  +D+GGNNI   GA ++   LK+N  
Sbjct: 346 TDKELASLNLYMNELCDLGAIAVCNALRQNTAIQILDIGGNNILQAGAESLGDALKENIS 405

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           + +L++ YNPIG  G  AL++  KFH  + TL++GWC+I   GA  +AD ++YN  ++ L
Sbjct: 406 LRTLEIGYNPIGPKGGAALADAFKFHSKLTTLRMGWCKITKEGARHIADAMKYNEHVTTL 465

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           DLR N L DEG   +AQS  +VNE LTS+DL +NEI+D+GAFA+AQA+K N D ++TS++
Sbjct: 466 DLRGNELGDEGCAAIAQSLGMVNENLTSLDLGYNEIKDNGAFALAQAIKNNADASITSIS 525

Query: 565 LANNFLTKFGQSALTDAKDLVYEMS 589
           L NN++TKFG+ ALT+A +LV E++
Sbjct: 526 LNNNYITKFGEVALTEAVELVQELN 550


>gi|412985803|emb|CCO17003.1| predicted protein [Bathycoccus prasinos]
          Length = 772

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/453 (44%), Positives = 300/453 (66%), Gaps = 1/453 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           + RE K+   +   ELR F +VD++GR  GD+G   +AE + +N+TA  V F ANG    
Sbjct: 320 MSREFKRLCRDCVDELRRFQTVDLNGRKLGDDGAKIIAEGIAFNETASCVDFGANGFGET 379

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
            + A    +  N  L+ ++ + NP+ D GV  L + L  +  +  L ++S    D+GAKA
Sbjct: 380 AMLAITEAMSQNKKLRMVSFASNPLLDVGVIALANYLKTDTKITTLNINSCSFGDDGAKA 439

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +AE LK+N+ +  LE+NNN IDY G T+LA+AL +N T+  + L GNY GALG  ALA  
Sbjct: 440 LAEALKSNTSITSLEMNNNAIDYEGSTALAQALAQNDTLEHVSLQGNYVGALGTVALANA 499

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L  N SL+ L L+GN IG+EG   L   LS RK KL  LDIGNN+I       + +Y+K+
Sbjct: 500 LVDNSSLKSLTLNGNDIGNEGCVKLCEALSKRKTKLTNLDIGNNAIGPDSGAALCDYLKD 559

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             +L  +NLYMN++ D+GA K++ ALK N T+  +D+GGNNI + GA A+++ LK+N+ +
Sbjct: 560 DDALTHLNLYMNELSDDGAVKMSPALKDNATLKNLDIGGNNIGALGAMALSKSLKENTAL 619

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           T+L+L YNPIG DG  AL+E LKFH  I TL++GWC+IG  GA  +AD + YN +++ LD
Sbjct: 620 TTLELGYNPIGKDGGIALAESLKFHAKIETLRVGWCKIGKEGAAALADTITYNESLTTLD 679

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           LR N L D+G + L +S  VVNE L+++DL +NEI+D+GAFA+A A+K N + A+ ++++
Sbjct: 680 LRGNELGDDGVRSLGKSLAVVNEHLSTLDLGYNEIKDEGAFALAAAIKNNAEGALENVSV 739

Query: 566 ANNFLTKFGQSALTDAKDLVYEMSE-KEVNIFF 597
            NN++TK G+ AL +A +LV E++E +E+ + F
Sbjct: 740 NNNYITKLGEVALIEAAELVAELNEDRELYVQF 772


>gi|449520593|ref|XP_004167318.1| PREDICTED: uncharacterized protein LOC101226018, partial [Cucumis
           sativus]
          Length = 350

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/347 (61%), Positives = 256/347 (73%), Gaps = 19/347 (5%)

Query: 3   STSTISLYSHPKLSHRAQPVLSRSF--------CQARDAPLSFALPFSGTRRCFRLKRLV 54
           STSTIS  SHPK+  R   + S             A  A LS     +   R FRL+ LV
Sbjct: 5   STSTISFCSHPKIFLRLHSLGSPRVGFGASGLNYHANGAFLSV----THRTRGFRLRNLV 60

Query: 55  VKAAARPEGGRRQ----RRVYRQSQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVE 110
           +KA  R + G R+    RRVYR SQ+ ++   APVKQ+AS V+PAGV V  TFVLWKLVE
Sbjct: 61  LKATLRSDSGSRRAATSRRVYRDSQTQSSSLVAPVKQLASTVLPAGVLVVFTFVLWKLVE 120

Query: 111 KLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMS 170
           +L++ K  + S       ++  GAG NL      K+ RE+K  LN+FAKELR F SVDM+
Sbjct: 121 RLMVQKSDKSSSSVKNKWSF--GAGINLFPDLAAKVDREAKLKLNDFAKELRTFRSVDMT 178

Query: 171 GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPI 230
            RNFGDEGLFFLAESLGYNQT EEV+F+ANGITA GIKAFDGVLQSNI LKTL+LSGNPI
Sbjct: 179 ARNFGDEGLFFLAESLGYNQTVEEVNFSANGITAEGIKAFDGVLQSNIILKTLDLSGNPI 238

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           GD+GVK LCD+LV+N+ +E L+L+S D+ DEGAKA++E+LKNNS LR++ELNNNMIDYSG
Sbjct: 239 GDDGVKTLCDLLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSSLRIIELNNNMIDYSG 298

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           FTSL  ALLEN+TIR++HL GNYGGALGANALAKGLEGNKSLR +HL
Sbjct: 299 FTSLGGALLENNTIRNIHLTGNYGGALGANALAKGLEGNKSLR-VHL 344



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 102/180 (56%), Gaps = 1/180 (0%)

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           ++ K  ++   +++   + GDEG   +A++L  N+T+  ++   N I ++G  A   VL+
Sbjct: 164 DFAKELRTFRSVDMTARNFGDEGLFFLAESLGYNQTVEEVNFSANGITAEGIKAFDGVLQ 223

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N ++ +LDL+ NPIG DG K L ++L  + +I TL+L    +G  GA+ V++ML+ N++
Sbjct: 224 SNIILKTLDLSGNPIGDDGVKTLCDLLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSS 283

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           + I++L  N +   G   L  +  + N  + +I L  N     GA A+A+ L+ N+ + V
Sbjct: 284 LRIIELNNNMIDYSGFTSLGGAL-LENNTIRNIHLTGNYGGALGANALAKGLEGNKSLRV 342



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 1/169 (0%)

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
           E  T RS+ +     G  G   LA+ L  N+++ E++   N I  EGI+A   G+     
Sbjct: 168 ELRTFRSVDMTARNFGDEGLFFLAESLGYNQTVEEVNFSANGITAEGIKAF-DGVLQSNI 226

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
            L  LD+  N I   G   + + + N  S+  + L   D+GDEGA+ +++ LK N ++  
Sbjct: 227 ILKTLDLSGNPIGDDGVKTLCDLLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSSLRI 286

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           I+L  N I   G +++   L +N+ I ++ L  N  GA GA AL++ L+
Sbjct: 287 IELNNNMIDYSGFTSLGGALLENNTIRNIHLTGNYGGALGANALAKGLE 335



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 80/161 (49%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +D+   +   +G F +AE +   +++  +N   N I  EG +     L+ N  + T+DL 
Sbjct: 175 VDMTARNFGDEGLFFLAESLGYNQTVEEVNFSANGITAEGIKAFDGVLQSNIILKTLDLS 234

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I   G   +  +L +NS I +L L    +G +GAKA+SE+LK + ++  ++L    I
Sbjct: 235 GNPIGDDGVKTLCDLLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSSLRIIELNNNMI 294

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
             SG   +   L  NNTI  + L  N     GA  LA+  +
Sbjct: 295 DYSGFTSLGGALLENNTIRNIHLTGNYGGALGANALAKGLE 335



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 77/153 (50%), Gaps = 1/153 (0%)

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   LAE+L  N T+  ++ + N   A G  A    L+ N  L+ L L GN IGD+G++ 
Sbjct: 186 GLFFLAESLGYNQTVEEVNFSANGITAEGIKAFDGVLQSNIILKTLDLSGNPIGDDGVKT 245

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L   L      +  L + +  +  +GA  V+E +KN  SL  I L  N I   G   +  
Sbjct: 246 LCD-LLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSSLRIIELNNNMIDYSGFTSLGG 304

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           AL +N TI  I L GN   + GA+A+A+ L+ N
Sbjct: 305 ALLENNTIRNIHLTGNYGGALGANALAKGLEGN 337


>gi|308801333|ref|XP_003077980.1| unnamed protein product [Ostreococcus tauri]
 gi|116056431|emb|CAL52720.1| unnamed protein product [Ostreococcus tauri]
          Length = 517

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/457 (46%), Positives = 307/457 (67%), Gaps = 5/457 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
            TGK    +++ L +   ELR  ++VD+SG+N GDEG  F+AE+  YN  A  V  +ANG
Sbjct: 65  ITGK----ARRMLRDVMDELRRVATVDVSGKNLGDEGACFIAEAFAYNNVASCVDMSANG 120

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I   G  A    L+ N  L  L+L+ NPIGD+G K L + L  +  +  L L++  + DE
Sbjct: 121 IGLDGTTALCEALKCNDTLTMLSLASNPIGDDGAKVLAEYLKVDKKITTLNLNACSIGDE 180

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GAKAIAE LK N+ +  LE+NNNM+DY G  ++A+AL +N+T+  L LNGNY GALGA++
Sbjct: 181 GAKAIAEALKMNTTIISLEMNNNMVDYEGSGAMAQALAQNTTLELLALNGNYVGALGASS 240

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
               L+ N  LR L L+GN IG+EG   L  GL++R  K+  LD+GNNSI       + +
Sbjct: 241 FGAALKENTGLRSLQLNGNDIGNEGCIKLCEGLAARSEKINNLDLGNNSIGPAAGPALRD 300

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           Y+K   SL  +NLYMN++ ++G   IA+ALK N+ I  +D+GGNNI   GA  +A  L+D
Sbjct: 301 YLKVDDSLTHLNLYMNELANDGCAAIAEALKDNKKIEMLDIGGNNIGGYGAEQLALALRD 360

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           NS +T+L+L YNPIG  G KAL+E +KFHG + T+++GWC+IG  G    A+ ++Y+ ++
Sbjct: 361 NSSLTTLELGYNPIGVPGGKALAETVKFHGALGTMRMGWCKIGKEGGFAFAEAIKYSQSL 420

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           ++LDLR N L D+G   L+QS  VVNE LT++DL +NEI+D GAFA+AQA+K N + ++ 
Sbjct: 421 AVLDLRGNDLGDDGVAALSQSLAVVNEVLTNLDLGYNEIKDKGAFALAQAIKNNAEGSLQ 480

Query: 562 SLNLANNFLTKFGQSALTDAKDLVYEMS-EKEVNIFF 597
           +L++ NN+LTKFG+ ALT+A +LV EM+ ++++ I F
Sbjct: 481 TLSINNNYLTKFGEVALTEAVELVEEMNPDRDLYIQF 517



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 175/369 (47%), Gaps = 33/369 (8%)

Query: 138 LLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAE------------- 184
           +LS  +  +  +  + L E+ K  +  ++++++  + GDEG   +AE             
Sbjct: 141 MLSLASNPIGDDGAKVLAEYLKVDKKITTLNLNACSIGDEGAKAIAEALKMNTTIISLEM 200

Query: 185 ---------------SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP 229
                          +L  N T E ++   N + A G  +F   L+ N  L++L L+GN 
Sbjct: 201 NNNMVDYEGSGAMAQALAQNTTLELLALNGNYVGALGASSFGAALKENTGLRSLQLNGND 260

Query: 230 IGDEGVKCLCDILVDNA-GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
           IG+EG   LC+ L   +  +  L L +  +      A+ + LK +  L  L L  N +  
Sbjct: 261 IGNEGCIKLCEGLAARSEKINNLDLGNNSIGPAAGPALRDYLKVDDSLTHLNLYMNELAN 320

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++AEAL +N  I  L + GN  G  GA  LA  L  N SL  L L  N IG  G +
Sbjct: 321 DGCAAIAEALKDNKKIEMLDIGGNNIGGYGAEQLALALRDNSSLTTLELGYNPIGVPGGK 380

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   +    G L  + +G   I  +G F  AE IK  +SL  ++L  ND+GD+G   ++
Sbjct: 381 ALAETVKFH-GALGTMRMGWCKIGKEGGFAFAEAIKYSQSLAVLDLRGNDLGDDGVAALS 439

Query: 409 DALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNS--VITSLDLAYNPIGADGAKALSE 465
            +L   N  +T +DLG N I  KGA A+A+ +K+N+   + +L +  N +   G  AL+E
Sbjct: 440 QSLAVVNEVLTNLDLGYNEIKDKGAFALAQAIKNNAEGSLQTLSINNNYLTKFGEVALTE 499

Query: 466 VLKFHGNIN 474
            ++    +N
Sbjct: 500 AVELVEEMN 508


>gi|384246674|gb|EIE20163.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
          Length = 660

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/468 (44%), Positives = 301/468 (64%), Gaps = 16/468 (3%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           +L +E+ Q LN    ELR   + D+S +N G+EG  F++E   +N        + NGI  
Sbjct: 194 QLQKEAVQRLNVMIDELRNSQNADLSAKNLGEEGCIFISEGFAFNDRCVAADLSKNGIGV 253

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            GI A    L  N  L+TL L  N IGDEG + L   L  ++ + RL LS  ++ D+GA 
Sbjct: 254 KGITAVTDALSHNDVLQTLVLDTNSIGDEGAEVLAKHLTGDSTIRRLNLSGNNVGDKGAT 313

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            +AE+LK N+ L  LELN+N IDY G  +LAEA+ EN+++ +LHL+ NY GALGA+ LA 
Sbjct: 314 LLAEMLKMNTTLTSLELNSNNIDYDGALALAEAITENTSLSALHLSDNYIGALGASVLAN 373

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L+ NKSLRELH+ GN +G+EG+RA+   L  R+  +  LD GNNS++ +GA  +A  + 
Sbjct: 374 ALKKNKSLRELHMKGNELGNEGVRAICEALIERQSPVTSLDFGNNSLTEEGAEAIAR-VA 432

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +   L  +NLYMNDIGD G  K+A AL+ + ++ ++D+GGNN+   G +A+A  L+ N  
Sbjct: 433 DKAHLKELNLYMNDIGDAGIFKLAKALEGDSSLVSLDVGGNNVGPDGITALAGALRGNDT 492

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA-SGAEFVADMLRYNNTISI 503
           + +L+L YNPIG  GA AL++V+K+   + TLK+GWC +GA +GA+ VAD+L +NN+I++
Sbjct: 493 LRTLELGYNPIGDKGALALADVVKYDLKVETLKMGWCHVGADAGAKAVADLLMFNNSIAV 552

Query: 504 LDLRANGLRDEGAKCLAQSFKV-VNEALTSIDLAFNEIRDDGAFAIA------------Q 550
           LDLR NGL + GA  +A+S K   N+ LT +DL +NEI+D+GA  +A            Q
Sbjct: 553 LDLRGNGLGNAGAAQIARSLKEHTNDKLTELDLGYNEIKDEGACTLAQARPRTPLSGFLQ 612

Query: 551 ALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMS-EKEVNIFF 597
           ALKAN + A   L +  N++ +FGQ ALT+A D+VYEM+  +E+ I +
Sbjct: 613 ALKANPERAPRELKVNANYIGRFGQVALTEALDMVYEMAGGREIVITY 660


>gi|307105454|gb|EFN53703.1| hypothetical protein CHLNCDRAFT_136530 [Chlorella variabilis]
          Length = 607

 Score =  368 bits (945), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 204/454 (44%), Positives = 302/454 (66%), Gaps = 3/454 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L +E++Q LNEF   LR  ++ D+S +N GDEG  ++ ++L +N       F+ NGI   
Sbjct: 155 LAKEAQQRLNEFMDVLRNMATADLSAKNLGDEGFAYVVDALSFNDRCVAADFSKNGIGPQ 214

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G      VL SN  LKTL L  N +GDEG   L   L   + +  L LS  ++ D GAKA
Sbjct: 215 GCAQLCQVLTSNSGLKTLLLDTNTLGDEGAAMLATALAGGSRLTSLNLSGNNIGDAGAKA 274

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +AE+LK N+ L VLELN N+IDY G  +LAEAL +N+++++L L+ NY    GA  LA  
Sbjct: 275 LAEMLKTNTTLEVLELNGNVIDYEGVGALAEALAQNTSLKTLGLSDNYIQTPGAALLAAA 334

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N +L+EL++ GN +GDEGI+++   L   K +L  +D GNNS+  +GAF +AE ++ 
Sbjct: 335 LKENNTLQELYIKGNELGDEGIKSVCEALKQHK-ELKAVDFGNNSMGKEGAFALAELLRG 393

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
           C ++  +N+ MND+G++GA +IA A+K NR++  +D+GGNNI   GA A+A  LK N  +
Sbjct: 394 CTTITDVNINMNDVGNDGAFQIAAAIKDNRSLKLLDVGGNNIGEDGAKALAAALKGNEEL 453

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA-SGAEFVADMLRYNNTISIL 504
            SL+L+YNP+G +GA+A ++++K+   +  L +GWC++G+  G + VADML YNNTI  L
Sbjct: 454 RSLELSYNPMGPEGAQAFADIIKYDMKLEVLGMGWCKVGSGDGVKAVADMLMYNNTIRRL 513

Query: 505 DLRANGLRDEGAKCLAQSFKV-VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           DLR NGL ++GA   ++ FK   N+AL  ++L +NEI+D+GA A+AQALKAN + A    
Sbjct: 514 DLRGNGLGNDGAIWFSRGFKEHTNDALRELELGYNEIKDEGACALAQALKANPEGAPKEF 573

Query: 564 NLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
            +  N++TKFGQ ALT+A D+VY+M++KE+ I F
Sbjct: 574 KINANYITKFGQVALTEALDMVYDMAKKEITITF 607



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 34/250 (13%)

Query: 363 VLDIGNNSISAKGAFHVA-----EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
           V   G  SI ++G    A     E++   +++   +L   ++GDEG   + DAL  N   
Sbjct: 142 VQQAGGASIQSRGLAKEAQQRLNEFMDVLRNMATADLSAKNLGDEGFAYVVDALSFNDRC 201

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
              D   N I  +G + + +VL  NS + +L L  N +G +GA  L+  L     + +L 
Sbjct: 202 VAADFSKNGIGPQGCAQLCQVLTSNSGLKTLLLDTNTLGDEGAAMLATALAGGSRLTSLN 261

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ------SFKVV----- 526
           L    IG +GA+ +A+ML+ N T+ +L+L  N +  EG   LA+      S K +     
Sbjct: 262 LSGNNIGDAGAKALAEMLKTNTTLEVLELNGNVIDYEGVGALAEALAQNTSLKTLGLSDN 321

Query: 527 ----------------NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
                           N  L  + +  NE+ D+G  ++ +ALK +++  + +++  NN +
Sbjct: 322 YIQTPGAALLAAALKENNTLQELYIKGNELGDEGIKSVCEALKQHKE--LKAVDFGNNSM 379

Query: 571 TKFGQSALTD 580
            K G  AL +
Sbjct: 380 GKEGAFALAE 389


>gi|302836580|ref|XP_002949850.1| hypothetical protein VOLCADRAFT_104495 [Volvox carteri f.
           nagariensis]
 gi|300264759|gb|EFJ48953.1| hypothetical protein VOLCADRAFT_104495 [Volvox carteri f.
           nagariensis]
          Length = 378

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 161/360 (44%), Positives = 230/360 (63%), Gaps = 13/360 (3%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L    + D GA A+AE LK N+ L+ L+L+ N ID  G  +LA A+  +ST+  L L 
Sbjct: 19  LDLGQNGIGDSGAAALAEALKLNTRLQRLDLSGNAIDKEGAAALAAAVAASSTLEVLVLT 78

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL---------SSRKGKL 361
            NY G  GA +LA  L  N SLRELHL GN IGD G+ A+   L          +R G +
Sbjct: 79  DNYLGEAGALSLADALRANSSLRELHLKGNEIGDAGVAAICEALMVGGAGVGGEARHGDI 138

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
           AVLD+GNNS++  GA  +   +   +SL  +NLYMNDIGD G  K+A A+  N+ +  +D
Sbjct: 139 AVLDLGNNSLTEAGAAVLTRLLSLKRSLKDLNLYMNDIGDIGVGKMAHAIADNKGLAVLD 198

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGW 480
           LGGNNI  KG +A+A  L+++  ++SL+L YNP+G +G K ++++ KF+   + TLK+GW
Sbjct: 199 LGGNNIGPKGVAALAGALRNHGSLSSLELGYNPLGPEGTKTVTDLAKFNLPKLTTLKMGW 258

Query: 481 CQI-GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV-NEALTSIDLAFN 538
           C++ G  GA  ++D+L  N+T+S LDLR N L ++GA  L++  K   N  L  +DL +N
Sbjct: 259 CKVAGGDGARALSDLLLLNSTLSHLDLRGNSLGNDGAILLSRGLKAAENSKLVDLDLGYN 318

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE-KEVNIFF 597
           EI+DDGA A+AQALKAN + A   L L +N++TKFGQ AL++A D+VY+M + K   + F
Sbjct: 319 EIKDDGACALAQALKANPEGAPKELKLNSNYITKFGQVALSEAVDMVYDMGKGKMTTVHF 378



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 14/199 (7%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+   +++   + GD G+  +A ++  N+    +    N I   G+ A  G L+++ +L 
Sbjct: 164 RSLKDLNLYMNDIGDIGVGKMAHAIADNKGLAVLDLGGNNIGPKGVAALAGALRNHGSLS 223

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL------RDEGAKAIAELLKNNSI 275
           +L L  NP+G EG K + D+    A     +L+++ +        +GA+A+++LL  NS 
Sbjct: 224 SLELGYNPLGPEGTKTVTDL----AKFNLPKLTTLKMGWCKVAGGDGARALSDLLLLNST 279

Query: 276 LRVLELNNNMIDYSGFTSLAEAL--LENSTIRSLHLNGNYGGALGANALAKGLEGNK--S 331
           L  L+L  N +   G   L+  L   ENS +  L L  N     GA ALA+ L+ N   +
Sbjct: 280 LSHLDLRGNSLGNDGAILLSRGLKAAENSKLVDLDLGYNEIKDDGACALAQALKANPEGA 339

Query: 332 LRELHLHGNSIGDEGIRAL 350
            +EL L+ N I   G  AL
Sbjct: 340 PKELKLNSNYITKFGQVAL 358



 Score = 42.0 bits (97), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 43/166 (25%)

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE--------------- 514
           H ++ TL LG   IG SGA  +A+ L+ N  +  LDL  N +  E               
Sbjct: 13  HPHLTTLDLGQNGIGDSGAAALAEALKLNTRLQRLDLSGNAIDKEGAAALAAAVAASSTL 72

Query: 515 -------------GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA------- 554
                        GA  LA + +  N +L  + L  NEI D G  AI +AL         
Sbjct: 73  EVLVLTDNYLGEAGALSLADALR-ANSSLRELHLKGNEIGDAGVAAICEALMVGGAGVGG 131

Query: 555 ---NEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
              + D+AV  L+L NN LT+ G + LT  + L  + S K++N++ 
Sbjct: 132 EARHGDIAV--LDLGNNSLTEAGAAVLT--RLLSLKRSLKDLNLYM 173


>gi|297849646|ref|XP_002892704.1| hypothetical protein ARALYDRAFT_888610 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338546|gb|EFH68963.1| hypothetical protein ARALYDRAFT_888610 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 195

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/228 (59%), Positives = 154/228 (67%), Gaps = 56/228 (24%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           +ELHLHGNSIGDEG RALM+GLSS KG      I ++S                      
Sbjct: 15  QELHLHGNSIGDEGTRALMAGLSSHKG----FSIEHSS---------------------- 48

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
                    +GAEKIADALKQNR+I TIDLGGNNIH++G +AIA+ LKDN++IT+     
Sbjct: 49  ---------DGAEKIADALKQNRSIATIDLGGNNIHAEGVNAIAQALKDNAIITT----- 94

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
                           FHGN+  LKLGWCQI A GAE +ADMLRYNNTIS+LDLRANGLR
Sbjct: 95  ----------------FHGNVKMLKLGWCQIAAKGAEHIADMLRYNNTISVLDLRANGLR 138

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           DEGA CLA+S KVVNEALTS+DL F EIRDDGAFAIAQALKANEDV V
Sbjct: 139 DEGASCLARSLKVVNEALTSVDLGFIEIRDDGAFAIAQALKANEDVTV 186



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 104/209 (49%), Gaps = 43/209 (20%)

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           + LHL+GN                            SIGDEG RALM+GLSS KG     
Sbjct: 15  QELHLHGN----------------------------SIGDEGTRALMAGLSSHKG----F 42

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT----- 419
            I +   S+ GA  +A+ +K  +S+  I+L  N+I  EG   IA ALK N  ITT     
Sbjct: 43  SIEH---SSDGAEKIADALKQNRSIATIDLGGNNIHAEGVNAIAQALKDNAIITTFHGNV 99

Query: 420 --IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTL 476
             + LG   I +KGA  IA +L+ N+ I+ LDL  N +  +GA  L+  LK  +  + ++
Sbjct: 100 KMLKLGWCQIAAKGAEHIADMLRYNNTISVLDLRANGLRDEGASCLARSLKVVNEALTSV 159

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILD 505
            LG+ +I   GA  +A  L+ N  +++ D
Sbjct: 160 DLGFIEIRDDGAFAIAQALKANEDVTVRD 188



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 17/173 (9%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           + L+L GN IGDEG + L       AG+   +  S++   +GA+ IA+ LK N  +  ++
Sbjct: 15  QELHLHGNSIGDEGTRALM------AGLSSHKGFSIEHSSDGAEKIADALKQNRSIATID 68

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG---------GALGANALAKGLEGNKS 331
           L  N I   G  ++A+AL +N+ I + H  GN            A GA  +A  L  N +
Sbjct: 69  LGGNNIHAEGVNAIAQALKDNAIITTFH--GNVKMLKLGWCQIAAKGAEHIADMLRYNNT 126

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           +  L L  N + DEG   L   L      L  +D+G   I   GAF +A+ +K
Sbjct: 127 ISVLDLRANGLRDEGASCLARSLKVVNEALTSVDLGFIEIRDDGAFAIAQALK 179



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 12/155 (7%)

Query: 134 AGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           AG +   GF+ +   +  + + +  K+ R+ +++D+ G N   EG+  +A++L  N  A 
Sbjct: 34  AGLSSHKGFSIEHSSDGAEKIADALKQNRSIATIDLGGNNIHAEGVNAIAQALKDN--AI 91

Query: 194 EVSFAAN---------GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-V 243
             +F  N          I A G +    +L+ N  +  L+L  N + DEG  CL   L V
Sbjct: 92  ITTFHGNVKMLKLGWCQIAAKGAEHIADMLRYNNTISVLDLRANGLRDEGASCLARSLKV 151

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            N  +  + L  +++RD+GA AIA+ LK N  + V
Sbjct: 152 VNEALTSVDLGFIEIRDDGAFAIAQALKANEDVTV 186


>gi|156390401|ref|XP_001635259.1| predicted protein [Nematostella vectensis]
 gi|156222351|gb|EDO43196.1| predicted protein [Nematostella vectensis]
          Length = 398

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 158/398 (39%), Positives = 222/398 (55%), Gaps = 12/398 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              +D+ G   GDEG   +A++L  N T E++    N I   G  A    L +N  L+ L
Sbjct: 6   LEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKL 65

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQL--SSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L GN IGD+G   +   L+ N+ +E+L L  + +   DEGA AIA+ L  NS L  L+L
Sbjct: 66  DLEGNKIGDDGAIAIAKALMTNSTLEKLDLEGNKIGDEDEGAIAIAKALMTNSTLEKLDL 125

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G  ++A+AL+ NST+  L L GN  G  GA A+AK L  N +L +L L GN 
Sbjct: 126 EGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNK 185

Query: 342 IGDEG----IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           IGDEG     +ALM+  + +K     LD+  N I  +GA  +A+ +    +L  ++L  N
Sbjct: 186 IGDEGAIAIAKALMTNSTLKK-----LDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGN 240

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IGDEGA  IA AL  N T+  +DL GN I  +GA AIA+ L  NS +  LDL  N IG 
Sbjct: 241 KIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGD 300

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           +GA A+++ L  +  +  L L   +IG  GA  +A  L  N+T+  LDL  N + DEGA 
Sbjct: 301 EGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAI 360

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            +A++  + N  L  +DL  N+I D+GA AIA+AL  N
Sbjct: 361 AIAKAL-MTNSTLKKLDLEGNKIGDEGAIAIAKALMTN 397



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 155/396 (39%), Positives = 216/396 (54%), Gaps = 6/396 (1%)

Query: 188 YNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG 247
            N T E++    N I   G  A    L +N  L+ L+L GN IGDEG   +   L+ N+ 
Sbjct: 2   TNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNST 61

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI--DYSGFTSLAEALLENSTIR 305
           +E+L L    + D+GA AIA+ L  NS L  L+L  N I  +  G  ++A+AL+ NST+ 
Sbjct: 62  LEKLDLEGNKIGDDGAIAIAKALMTNSTLEKLDLEGNKIGDEDEGAIAIAKALMTNSTLE 121

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L GN  G  GA A+AK L  N +L +L L GN IGDEG  A+   L +    L  LD
Sbjct: 122 KLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNS-TLEKLD 180

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I  +GA  +A+ +    +L  ++L  N IGDEGA  IA AL  N T+  +DL GN
Sbjct: 181 LEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGN 240

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I  +GA AIA+ L  NS +  LDL  N IG +GA A+++ L  +  +  L L   +IG 
Sbjct: 241 KIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGD 300

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  +A  L  N+T+  LDL  N + DEGA  +A++  + N  L  +DL  N+I D+GA
Sbjct: 301 EGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKAL-MTNSTLKKLDLEGNKIGDEGA 359

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            AIA+AL  N    +  L+L  N +   G  A+  A
Sbjct: 360 IAIAKALMTNS--TLKKLDLEGNKIGDEGAIAIAKA 393



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/284 (40%), Positives = 160/284 (56%), Gaps = 9/284 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              +D+ G   GDEG   +A++L  N T E++    N I   G  A    L +N  L+ L
Sbjct: 120 LEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKL 179

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L GN IGDEG   +   L+ N+ +++L L    + DEGA AIA+ L  NS L+ L+L  
Sbjct: 180 DLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEG 239

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  ++A+AL+ NST++ L L GN  G  GA A+AK L  N +L++L L GN IG
Sbjct: 240 NKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIG 299

Query: 344 DEG----IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           DEG     +ALM+  + +K     LD+  N I  +GA  +A+ +    +L  ++L  N I
Sbjct: 300 DEGAIAIAKALMTNSTLKK-----LDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKI 354

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           GDEGA  IA AL  N T+  +DL GN I  +GA AIA+ L  NS
Sbjct: 355 GDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNS 398



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/285 (39%), Positives = 155/285 (54%), Gaps = 6/285 (2%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           + NST+  L L GN  G  GA A+AK L  N +L +L L GN IGDEG  A+   L +  
Sbjct: 1   MTNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNS 60

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG--DEGAEKIADALKQNRT 416
             L  LD+  N I   GA  +A+ +    +L  ++L  N IG  DEGA  IA AL  N T
Sbjct: 61  -TLEKLDLEGNKIGDDGAIAIAKALMTNSTLEKLDLEGNKIGDEDEGAIAIAKALMTNST 119

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  +DL GN I  +GA AIA+ L  NS +  LDL  N IG +GA A+++ L  +  +  L
Sbjct: 120 LEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKL 179

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L   +IG  GA  +A  L  N+T+  LDL  N + DEGA  +A++  + N  L  +DL 
Sbjct: 180 DLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKAL-MTNSTLKKLDLE 238

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            N+I D+GA AIA+AL  N    +  L+L  N +   G  A+  A
Sbjct: 239 GNKIGDEGAIAIAKALMTNS--TLKKLDLEGNKIGDEGAIAIAKA 281


>gi|159466436|ref|XP_001691415.1| hypothetical protein CHLREDRAFT_170113 [Chlamydomonas reinhardtii]
 gi|158279387|gb|EDP05148.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 364

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/379 (40%), Positives = 225/379 (59%), Gaps = 28/379 (7%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           VL S + ++TL L+ N +GD G + L   +  +  +  L L    + D GA A+AE LK 
Sbjct: 1   VLPSAV-IQTLVLNTNSLGDGGSEQLAKAIAGHPHLTTLDLGQNGIGDAGATALAEALKL 59

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L+ L+L+ N ID  G  +LA A+  +ST+  L L  NY G  GA ALA  L  N S+
Sbjct: 60  NTRLQRLDLSGNAIDKDGAAALAGAVAGSSTLEVLVLTDNYLGEAGALALADALRANTSV 119

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           +ELHL GN +GD G+ A+   L SR   +  LD+GNNSI+  GA H+   +   +SL  +
Sbjct: 120 KELHLKGNEMGDAGVTAICEALMSRACDITFLDLGNNSITEAGATHLNRLLFQKRSLKEL 179

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++YMNDIGDEG                          KG + +A  L+++  ++SL+L Y
Sbjct: 180 HMYMNDIGDEGV------------------------GKGVAVLAGALRNHGALSSLELGY 215

Query: 453 NPIGADGAKALSEVLKFH-GNINTLKLGWCQI-GASGAEFVADMLRYNNTISILDLRANG 510
           NP+G +G K ++++ KF    + TLKLGWC++ G  GA  ++D+L  N +++ LDLR N 
Sbjct: 216 NPLGPEGTKTITDLAKFQLPKLTTLKLGWCKVAGGDGARALSDLLLLNASLTHLDLRGNS 275

Query: 511 LRDEGAKCLAQSFKVV-NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
           L ++GA  L++  K   N  L  +DL +NEI+DDGA A+AQALKAN + A   L L +N+
Sbjct: 276 LGNDGAILLSRGLKAAENSKLADLDLGYNEIKDDGACALAQALKANPEGAPRELKLNSNY 335

Query: 570 LTKFGQSALTDAKDLVYEM 588
           +T+FGQ AL++A D V++M
Sbjct: 336 ITRFGQVALSEAVDQVFDM 354



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 162/304 (53%), Gaps = 8/304 (2%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GD G   LA+++  +     +    NGI  AG  A    L+ N  L+ L+LSGN I  
Sbjct: 16  SLGDGGSEQLAKAIAGHPHLTTLDLGQNGIGDAGATALAEALKLNTRLQRLDLSGNAIDK 75

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           +G   L   +  ++ +E L L+   L + GA A+A+ L+ N+ ++ L L  N +  +G T
Sbjct: 76  DGAAALAGAVAGSSTLEVLVLTDNYLGEAGALALADALRANTSVKELHLKGNEMGDAGVT 135

Query: 293 SLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR--- 348
           ++ EAL+  +  I  L L  N     GA  L + L   +SL+ELH++ N IGDEG+    
Sbjct: 136 AICEALMSRACDITFLDLGNNSITEAGATHLNRLLFQKRSLKELHMYMNDIGDEGVGKGV 195

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINL-YMNDIGDEGAEK 406
           A+++G     G L+ L++G N +  +G   + +  K     L  + L +    G +GA  
Sbjct: 196 AVLAGALRNHGALSSLELGYNPLGPEGTKTITDLAKFQLPKLTTLKLGWCKVAGGDGARA 255

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLK--DNSVITSLDLAYNPIGADGAKALS 464
           ++D L  N ++T +DL GN++ + GA  ++R LK  +NS +  LDL YN I  DGA AL+
Sbjct: 256 LSDLLLLNASLTHLDLRGNSLGNDGAILLSRGLKAAENSKLADLDLGYNEIKDDGACALA 315

Query: 465 EVLK 468
           + LK
Sbjct: 316 QALK 319


>gi|194678537|ref|XP_584462.3| PREDICTED: protein NLRC3 [Bos taurus]
 gi|297490053|ref|XP_002697992.1| PREDICTED: protein NLRC3 [Bos taurus]
 gi|296473604|tpg|DAA15719.1| TPA: NLR family, CARD domain containing 3 [Bos taurus]
          Length = 1065

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 154/433 (35%), Positives = 234/433 (54%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S   L     +L    S+ +    F D  +  L   L G +   + +S A N I+  G K
Sbjct: 625  SPGVLQSLLPQLLYCRSLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  +RD+GA+ +AE
Sbjct: 685  ALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGARCMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L  
Sbjct: 745  ALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELMFSSNSIGDGGAKALAEALMV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L+ L L  NSI D G+ ALM  L + +  L+ L++  NSIS +GA  +A  ++   +
Sbjct: 805  NQGLKSLDLQSNSISDPGVAALMGALCTNQTLLS-LNLRENSISPEGAQDLARALRTNST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ +A+A+++NRT+T++ L  N I +  A A+ + L+ N+ +TSL
Sbjct: 864  LKSLDLTANLLHDQGAQAVAEAVRENRTLTSLHLQWNFIQAGAAKALGQALQLNTSLTSL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDEGASAVASALKVNTVLTALYLQVASIGAPGAQALGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  +GA  +A AL  N    +  +NL  N
Sbjct: 984  NTIEVAGAKALASALK-VNSSLQRLNLQENSLGMEGAICVATALSGNH--GLRHINLQGN 1040

Query: 569  FLTKFGQSALTDA 581
             + + G   +++A
Sbjct: 1041 HIGESGARMISEA 1053



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 187/364 (51%), Gaps = 1/364 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +++D+   + G +G   LA++L  N+T   +S  +N I   G +     L +N  L 
Sbjct: 694  RSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGARCMAEALATNRTLS 753

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L  SS  + D GAKA+AE L  N  L+ L+L
Sbjct: 754  VLHLQKNSIGPVGTQQMADALKQNRSLKELMFSSNSIGDGGAKALAEALMVNQGLKSLDL 813

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I   G  +L  AL  N T+ SL+L  N     GA  LA+ L  N +L+ L L  N 
Sbjct: 814  QSNSISDPGVAALMGALCTNQTLLSLNLRENSISPEGAQDLARALRTNSTLKSLDLTANL 873

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G +A+   +   +  L  L +  N I A  A  + + ++   SL  ++L  N IGD
Sbjct: 874  LHDQGAQAVAEAVRENR-TLTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQENAIGD 932

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EGA  +A ALK N  +T + L   +I + GA A+   L  N  +  LDL  N I   GAK
Sbjct: 933  EGASAVASALKVNTVLTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNTIEVAGAK 992

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA  VA  L  N+ +  ++L+ N + + GA+ +++
Sbjct: 993  ALASALKVNSSLQRLNLQENSLGMEGAICVATALSGNHGLRHINLQGNHIGESGARMISE 1052

Query: 522  SFKV 525
            + K 
Sbjct: 1053 AIKT 1056



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/337 (34%), Positives = 166/337 (49%), Gaps = 1/337 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 722  RTLASLSLQSNRIRDDGARCMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLK 781

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N IGD G K L + L+ N G++ L L S  + D G  A+   L  N  L  L L
Sbjct: 782  ELMFSSNSIGDGGAKALAEALMVNQGLKSLDLQSNSISDPGVAALMGALCTNQTLLSLNL 841

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G   LA AL  NST++SL L  N     GA A+A+ +  N++L  LHL  N 
Sbjct: 842  RENSISPEGAQDLARALRTNSTLKSLDLTANLLHDQGAQAVAEAVRENRTLTSLHLQWNF 901

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L      L  LD+  N+I  +GA  VA  +K    L  + L +  IG 
Sbjct: 902  IQAGAAKALGQALQLNT-SLTSLDLQENAIGDEGASAVASALKVNTVLTALYLQVASIGA 960

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G +GA 
Sbjct: 961  PGAQALGEALAVNRTLEILDLRGNTIEVAGAKALASALKVNSSLQRLNLQENSLGMEGAI 1020

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  +  +  + L    IG SGA  +++ ++ N
Sbjct: 1021 CVATALSGNHGLRHINLQGNHIGESGARMISEAIKTN 1057



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 3/210 (1%)

Query: 150  SKQTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
            S +   + A+ LR      S+D++     D+G   +AE++  N+T   +    N I A  
Sbjct: 847  SPEGAQDLARALRTNSTLKSLDLTANLLHDQGAQAVAEAVRENRTLTSLHLQWNFIQAGA 906

Query: 207  IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
             KA    LQ N +L +L+L  N IGDEG   +   L  N  +  L L    +   GA+A+
Sbjct: 907  AKALGQALQLNTSLTSLDLQENAIGDEGASAVASALKVNTVLTALYLQVASIGAPGAQAL 966

Query: 267  AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
             E L  N  L +L+L  N I+ +G  +LA AL  NS+++ L+L  N  G  GA  +A  L
Sbjct: 967  GEALAVNRTLEILDLRGNTIEVAGAKALASALKVNSSLQRLNLQENSLGMEGAICVATAL 1026

Query: 327  EGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
             GN  LR ++L GN IG+ G R +   + +
Sbjct: 1027 SGNHGLRHINLQGNHIGESGARMISEAIKT 1056


>gi|345802365|ref|XP_547153.3| PREDICTED: protein NLRC3 [Canis lupus familiaris]
          Length = 1068

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 154/433 (35%), Positives = 230/433 (53%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +   + +S A N I+  G K
Sbjct: 628  SRSVLQSLLPQLLYCRSLRLDNNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAK 687

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L  L+L  N IG +G K L D L  N  +  L L S ++RD GA+++AE
Sbjct: 688  ALARSLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAFLSLQSNEIRDNGARSMAE 747

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N +   G   +AE L +N +++ L  + N  G  GA ALAK L  
Sbjct: 748  ALATNRTLSVLHLQKNTVGPVGAQLMAETLKQNRSLKELIFSSNSIGDGGAEALAKALRV 807

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L  L++  NSIS +GA  +A  +++  +
Sbjct: 808  NQGLENLDLQSNSISDTGVAALMGALCANQA-LTSLNLRENSISPEGARELARALRSNST 866

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++N+ +T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 867  LKNLDLTANLLHDQGAQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTSL 926

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + D L  N T+ ILDLR 
Sbjct: 927  DLQENAIGDEGASAVASALKTNATLTALYLQAASIGARGAQALGDALAVNGTLEILDLRG 986

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  +A AL  N    +  +NL  N
Sbjct: 987  NAIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAICVATALSGNH--GLQHINLQGN 1043

Query: 569  FLTKFGQSALTDA 581
             + + G   +++A
Sbjct: 1044 HIGESGARMISEA 1056



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 207/399 (51%), Gaps = 11/399 (2%)

Query: 137  NLLSGFTGKLFRES---KQTLNEFAKEL-------RAFSSVDMSGRNFGDEGLFFLAESL 186
            ++LSG   ++ R S    Q  N+ AK L       R+ +++D+   + G +G   LA++L
Sbjct: 662  SVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTALDLRSNSIGPQGAKALADAL 721

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
              N+T   +S  +N I   G ++    L +N  L  L+L  N +G  G + + + L  N 
Sbjct: 722  KINRTLAFLSLQSNEIRDNGARSMAEALATNRTLSVLHLQKNTVGPVGAQLMAETLKQNR 781

Query: 247  GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
             ++ L  SS  + D GA+A+A+ L+ N  L  L+L +N I  +G  +L  AL  N  + S
Sbjct: 782  SLKELIFSSNSIGDGGAEALAKALRVNQGLENLDLQSNSISDTGVAALMGALCANQALTS 841

Query: 307  LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
            L+L  N     GA  LA+ L  N +L+ L L  N + D+G +A+   +   +  L  L +
Sbjct: 842  LNLRENSISPEGARELARALRSNSTLKNLDLTANLLHDQGAQAIAVAMRENQA-LTSLHL 900

Query: 367  GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
              N I A  A  + + ++  +SL  ++L  N IGDEGA  +A ALK N T+T + L   +
Sbjct: 901  QWNFIQAGAAKALGQALQLNRSLTSLDLQENAIGDEGASAVASALKTNATLTALYLQAAS 960

Query: 427  IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
            I ++GA A+   L  N  +  LDL  N IG  GAKAL+  LK + ++  L L    +G  
Sbjct: 961  IGARGAQALGDALAVNGTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMD 1020

Query: 487  GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            GA  VA  L  N+ +  ++L+ N + + GA+ ++++ K 
Sbjct: 1021 GAICVATALSGNHGLQHINLQGNHIGESGARMISEAIKT 1059



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 163/337 (48%), Gaps = 29/337 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  S + +     G  G   +AE+L  N++ +E+ F++N I   G +A    L+ N  L+
Sbjct: 753  RTLSVLHLQKNTVGPVGAQLMAETLKQNRSLKELIFSSNSIGDGGAEALAKALRVNQGLE 812

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N I D GV  L   L  N  +  L L    +  EGA+ +A  L++NS L+ L+L
Sbjct: 813  NLDLQSNSISDTGVAALMGALCANQALTSLNLRENSISPEGARELARALRSNSTLKNLDL 872

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N++   G  ++A A+ EN  + SLHL  N+  A  A AL + L+ N+SL  L L  N+
Sbjct: 873  TANLLHDQGAQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENA 932

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            IGDEG  A                             VA  +K   +L  + L    IG 
Sbjct: 933  IGDEGASA-----------------------------VASALKTNATLTALYLQAASIGA 963

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + DAL  N T+  +DL GN I   GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 964  RGAQALGDALAVNGTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAI 1023

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  +  +  + L    IG SGA  +++ ++ N
Sbjct: 1024 CVATALSGNHGLQHINLQGNHIGESGARMISEAIKTN 1060



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 137/278 (49%), Gaps = 27/278 (9%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 643 RSLRLDNNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTAL 702

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+  + L  N I   GA ++A  L  N  ++ L L  
Sbjct: 703 DLRSNSIGPQGAKALADALKINRTLAFLSLQSNEIRDNGARSMAEALATNRTLSVLHLQK 762

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N +G  GA+ ++E LK + ++  L      IG  GAE +A  LR N  +  LDL++N + 
Sbjct: 763 NTVGPVGAQLMAETLKQNRSLKELIFSSNSIGDGGAEALAKALRVNQGLENLDLQSNSIS 822

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN----------------- 555
           D G   L  +    N+ALTS++L  N I  +GA  +A+AL++N                 
Sbjct: 823 DTGVAALMGAL-CANQALTSLNLRENSISPEGARELARALRSNSTLKNLDLTANLLHDQG 881

Query: 556 ---------EDVAVTSLNLANNFLTKFGQSALTDAKDL 584
                    E+ A+TSL+L  NF+      AL  A  L
Sbjct: 882 AQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQL 919


>gi|194219286|ref|XP_001499317.2| PREDICTED: protein NLRC3 [Equus caballus]
          Length = 1063

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 157/433 (36%), Positives = 232/433 (53%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +   + +S A N I+  G K
Sbjct: 623  SQGVLQSLLPQLLYCRSLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAK 682

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  +RD+GA++IAE
Sbjct: 683  ALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNTIRDDGARSIAE 742

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 743  ALGTNRTLSVLHLQKNTIGPVGTQRMADALKQNKSLKELMFSSNSMGDGGAKALAEALKV 802

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L++  NSIS +GA  +A  +    +
Sbjct: 803  NQGLENLDLQSNSISDAGVAALMGALCTNQTLLS-LNLRENSISPEGAQDLAHALCTNST 861

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + DEGA+ IA A+++NR +T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 862  LKNLDLTANLLHDEGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNRSLTSL 921

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 922  DLQENAIGDEGASAVASALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRG 981

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  +A AL  N    +  +NL  N
Sbjct: 982  NTIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAICVATALSGNH--GLQHINLQGN 1038

Query: 569  FLTKFGQSALTDA 581
             + + G   +++A
Sbjct: 1039 HIGESGARMISEA 1051



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 190/364 (52%), Gaps = 1/364 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +++D+   + G +G   LA++L  N+T   +S  +N I   G ++    L +N  L 
Sbjct: 692  RSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNTIRDDGARSIAEALGTNRTLS 751

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L  SS  + D GAKA+AE LK N  L  L+L
Sbjct: 752  VLHLQKNTIGPVGTQRMADALKQNKSLKELMFSSNSMGDGGAKALAEALKVNQGLENLDL 811

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G  +L  AL  N T+ SL+L  N     GA  LA  L  N +L+ L L  N 
Sbjct: 812  QSNSISDAGVAALMGALCTNQTLLSLNLRENSISPEGAQDLAHALCTNSTLKNLDLTANL 871

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + DEG +A+   +   +  L  L +  N I A  A  + + ++  +SL  ++L  N IGD
Sbjct: 872  LHDEGAQAIAVAVRENRA-LTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENAIGD 930

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EGA  +A ALK N  +T + L   +I + GA A+   L  N  +  LDL  N IG  GAK
Sbjct: 931  EGASAVASALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNTIGVAGAK 990

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA  VA  L  N+ +  ++L+ N + + GA+ +++
Sbjct: 991  ALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQHINLQGNHIGESGARMISE 1050

Query: 522  SFKV 525
            + K 
Sbjct: 1051 AIKT 1054



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/337 (34%), Positives = 167/337 (49%), Gaps = 1/337 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G   +AE+LG N+T   +    N I   G +     L+ N +LK
Sbjct: 720  RTLASLSLQSNTIRDDGARSIAEALGTNRTLSVLHLQKNTIGPVGTQRMADALKQNKSLK 779

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N +GD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 780  ELMFSSNSMGDGGAKALAEALKVNQGLENLDLQSNSISDAGVAALMGALCTNQTLLSLNL 839

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G   LA AL  NST+++L L  N     GA A+A  +  N++L  LHL  N 
Sbjct: 840  RENSISPEGAQDLAHALCTNSTLKNLDLTANLLHDEGAQAIAVAVRENRALTSLHLQWNF 899

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L   +  L  LD+  N+I  +GA  VA  +K   +L  + L +  IG 
Sbjct: 900  IQAGAAKALGQALQLNR-SLTSLDLQENAIGDEGASAVASALKANTALTALYLQVASIGA 958

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 959  PGAQALGEALAVNRTLEILDLRGNTIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAI 1018

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  +  +  + L    IG SGA  +++ ++ N
Sbjct: 1019 CVATALSGNHGLQHINLQGNHIGESGARMISEAIKTN 1055



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 166/317 (52%), Gaps = 1/317 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  S + +     G  G   +A++L  N++ +E+ F++N +   G KA    L+ N  L+
Sbjct: 748  RTLSVLHLQKNTIGPVGTQRMADALKQNKSLKELMFSSNSMGDGGAKALAEALKVNQGLE 807

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N I D GV  L   L  N  +  L L    +  EGA+ +A  L  NS L+ L+L
Sbjct: 808  NLDLQSNSISDAGVAALMGALCTNQTLLSLNLRENSISPEGAQDLAHALCTNSTLKNLDL 867

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N++   G  ++A A+ EN  + SLHL  N+  A  A AL + L+ N+SL  L L  N+
Sbjct: 868  TANLLHDEGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENA 927

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            IGDEG  A+ S L +    L  L +   SI A GA  + E +   ++L  ++L  N IG 
Sbjct: 928  IGDEGASAVASALKANTA-LTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNTIGV 986

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ +A+ALK N ++  ++L  N++   GA  +A  L  N  +  ++L  N IG  GA+
Sbjct: 987  AGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQHINLQGNHIGESGAR 1046

Query: 462  ALSEVLKFHGNINTLKL 478
             +SE +K +    T+++
Sbjct: 1047 MISEAIKTNAPSCTVEM 1063



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 144/281 (51%), Gaps = 5/281 (1%)

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           RSL L+ N         L   L G    ++ + L  N I ++G +AL   L   +  L  
Sbjct: 638 RSLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNR-SLTT 696

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+ +NSI  +GA  +A+ +K  ++L  ++L  N I D+GA  IA+AL  NRT++ + L 
Sbjct: 697 LDLRSNSIGPQGAKALADALKINRTLASLSLQSNTIRDDGARSIAEALGTNRTLSVLHLQ 756

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I   G   +A  LK N  +  L  + N +G  GAKAL+E LK +  +  L L    I
Sbjct: 757 KNTIGPVGTQRMADALKQNKSLKELMFSSNSMGDGGAKALAEALKVNQGLENLDLQSNSI 816

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             +G   +   L  N T+  L+LR N +  EGA+ LA +    N  L ++DL  N + D+
Sbjct: 817 SDAGVAALMGALCTNQTLLSLNLRENSISPEGAQDLAHAL-CTNSTLKNLDLTANLLHDE 875

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           GA AIA A++ N   A+TSL+L  NF+      AL  A  L
Sbjct: 876 GAQAIAVAVRENR--ALTSLHLQWNFIQAGAAKALGQALQL 914


>gi|431906605|gb|ELK10726.1| Protein NLRC3 [Pteropus alecto]
          Length = 1104

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/436 (35%), Positives = 234/436 (53%), Gaps = 5/436 (1%)

Query: 147  FRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAA 205
             R S+  L     +L    S+ +    F D  +  L   L G +   + +S A N I+  
Sbjct: 661  LRLSQGVLQSLLPQLLYCRSLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNK 720

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
            G KA    L  N +L TL+L  N IG +G K L D L  N  +  L L S  +RD+G+++
Sbjct: 721  GAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGSRS 780

Query: 266  IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
            IAE L  N  L VL L  N I  +G   +A+AL +N +++ L  + N  G  GA ALA+ 
Sbjct: 781  IAEALAANRTLSVLHLQKNTIGPTGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEA 840

Query: 326  LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
            L+ N+ L+ L L  NSI D G+ ALM  L + +  L+ L++  NSIS +GA H+A  +  
Sbjct: 841  LKVNQGLQSLDLQSNSISDTGVAALMGALCANRTLLS-LNLRENSISPEGAQHLARALCT 899

Query: 386  CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
              +L  ++L  N + D+GA+ IA A+++N  +T++ L  N I +  A A+ + L+ N  +
Sbjct: 900  NSTLKNLDLTANLLHDQGAQAIAVAVRENHALTSLHLQWNFIQAGAAKALGQALQFNRSL 959

Query: 446  TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            TSLDL  N IG +G  A++  LK +  +  L L    IGA GA+ + + L  N T+ ILD
Sbjct: 960  TSLDLQENAIGDEGVCAVANALKANTALTALYLQVTSIGAPGAQALGEALSVNRTLEILD 1019

Query: 506  LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
            LR N +   GAK LA + K VN +L  ++L  N +  DGA  +A AL  N    +  +NL
Sbjct: 1020 LRGNTIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAICVATALSGNH--GLQHINL 1076

Query: 566  ANNFLTKFGQSALTDA 581
              N + + G   +++A
Sbjct: 1077 QGNHIGESGARMISEA 1092



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 169/345 (48%), Gaps = 29/345 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  S + +     G  G   +A++L  N++ +E+ F++N I   G KA    L+ N  L+
Sbjct: 789  RTLSVLHLQKNTIGPTGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLQ 848

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            +L+L  N I D GV  L   L  N  +  L L    +  EGA+ +A  L  NS L+ L+L
Sbjct: 849  SLDLQSNSISDTGVAALMGALCANRTLLSLNLRENSISPEGAQHLARALCTNSTLKNLDL 908

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N++   G  ++A A+ EN  + SLHL  N+  A  A AL + L+ N+SL  L L  N+
Sbjct: 909  TANLLHDQGAQAIAVAVRENHALTSLHLQWNFIQAGAAKALGQALQFNRSLTSLDLQENA 968

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            IGDEG+ A                             VA  +K   +L  + L +  IG 
Sbjct: 969  IGDEGVCA-----------------------------VANALKANTALTALYLQVTSIGA 999

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 1000 PGAQALGEALSVNRTLEILDLRGNTIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAI 1059

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             ++  L  +  +  + L    IG SGA  +++ ++ N  +  +++
Sbjct: 1060 CVATALSGNHGLQHINLQGNHIGESGARMISEAIKTNAPLCTVEM 1104


>gi|348583996|ref|XP_003477758.1| PREDICTED: protein NLRC3-like [Cavia porcellus]
          Length = 1065

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/430 (35%), Positives = 232/430 (53%), Gaps = 5/430 (1%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
             L     +L    S+ +    F D  +  L+  L       +++S A N I+  G KA  
Sbjct: 628  VLQSLLPQLLYCQSLRLDTNQFQDPVMELLSSVLSRKDCRIQKISLAENQISNKGAKALA 687

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N +L TL+L  N IG +G K L D L  N  +  L L S  ++D+GA+++AE L 
Sbjct: 688  RSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLTSLSLQSNAIKDDGARSVAEALA 747

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N +L VL L  N+I   G   +AEAL +N +++ L L+ N  G  GA ALA+ L+ N++
Sbjct: 748  VNQMLSVLHLQKNVIGPRGAQQMAEALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQA 807

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L L  NSI D G+ ALM  L + +  L+ L++  NSIS +GA  +A+ + +  +L  
Sbjct: 808  LLNLDLQSNSISDMGVAALMGALCANQTLLS-LNLRENSISPEGAQALAQALGSNSTLKH 866

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            ++L  N + D+GA+ IA A+ +N T+ ++ L  N I    A A+ + L+ NS +TSLDL 
Sbjct: 867  LDLTANLLHDQGAQAIAVAVGENHTLQSLHLQWNFIQVGAARALGQALQLNSSLTSLDLQ 926

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             N IG +GA AL+  LK +  +  L L    IG+ GA+ + + L  N T+ ILDLR N +
Sbjct: 927  ENAIGDEGASALASALKVNTALTALYLQVASIGSPGAQVLGEALAVNRTLEILDLRGNAI 986

Query: 512  RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
               GAK LA + K VN +L  + L  N +  DG   +A AL  N    +  +NL  N + 
Sbjct: 987  GVAGAKALANALK-VNSSLRRLSLQENSLGMDGVICVATALSGNH--GLQHINLQGNRIG 1043

Query: 572  KFGQSALTDA 581
            + G   ++DA
Sbjct: 1044 ESGARMISDA 1053



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/374 (32%), Positives = 191/374 (51%), Gaps = 2/374 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +++D+   + G +G   LA++L  N+T   +S  +N I   G ++    L  N  L 
Sbjct: 694  RSLTTLDLRSNSIGPQGAKALADALKINRTLTSLSLQSNAIKDDGARSVAEALAVNQMLS 753

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + + L  N  ++ L LSS  + D GAKA+AE LK N  L  L+L
Sbjct: 754  VLHLQKNVIGPRGAQQMAEALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQALLNLDL 813

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I   G  +L  AL  N T+ SL+L  N     GA ALA+ L  N +L+ L L  N 
Sbjct: 814  QSNSISDMGVAALMGALCANQTLLSLNLRENSISPEGAQALAQALGSNSTLKHLDLTANL 873

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G +A+   +      L  L +  N I    A  + + ++   SL  ++L  N IGD
Sbjct: 874  LHDQGAQAIAVAVGENH-TLQSLHLQWNFIQVGAARALGQALQLNSSLTSLDLQENAIGD 932

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EGA  +A ALK N  +T + L   +I S GA  +   L  N  +  LDL  N IG  GAK
Sbjct: 933  EGASALASALKVNTALTALYLQVASIGSPGAQVLGEALAVNRTLEILDLRGNAIGVAGAK 992

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  G   VA  L  N+ +  ++L+ N + + GA+ ++ 
Sbjct: 993  ALANALKVNSSLRRLSLQENSLGMDGVICVATALSGNHGLQHINLQGNRIGESGARMISD 1052

Query: 522  SFKVVNEALTSIDL 535
            + K  N  + ++++
Sbjct: 1053 AIK-TNAPMCTVEM 1065



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 156/299 (52%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + E  K+ R+   + +S  + GD G   LAE+L  NQ    +   +N I+  G+ A  
Sbjct: 768  QQMAEALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQALLNLDLQSNSISDMGVAALM 827

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            G L +N  L +LNL  N I  EG + L   L  N+ ++ L L++  L D+GA+AIA  + 
Sbjct: 828  GALCANQTLLSLNLRENSISPEGAQALAQALGSNSTLKHLDLTANLLHDQGAQAIAVAVG 887

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L+ L L  N I      +L +AL  NS++ SL L  N  G  GA+ALA  L+ N +
Sbjct: 888  ENHTLQSLHLQWNFIQVGAARALGQALQLNSSLTSLDLQENAIGDEGASALASALKVNTA 947

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG  G + L   L+  +  L +LD+  N+I   GA  +A  +K   SL  
Sbjct: 948  LTALYLQVASIGSPGAQVLGEALAVNR-TLEILDLRGNAIGVAGAKALANALKVNSSLRR 1006

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L  N +G +G   +A AL  N  +  I+L GN I   GA  I+  +K N+ + ++++
Sbjct: 1007 LSLQENSLGMDGVICVATALSGNHGLQHINLQGNRIGESGARMISDAIKTNAPMCTVEM 1065



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 95/202 (47%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L +          +D++     D+G   +A ++G N T + +    N I     +
Sbjct: 849  EGAQALAQALGSNSTLKHLDLTANLLHDQGAQAIAVAVGENHTLQSLHLQWNFIQVGAAR 908

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    LQ N +L +L+L  N IGDEG   L   L  N  +  L L    +   GA+ + E
Sbjct: 909  ALGQALQLNSSLTSLDLQENAIGDEGASALASALKVNTALTALYLQVASIGSPGAQVLGE 968

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L +L+L  N I  +G  +LA AL  NS++R L L  N  G  G   +A  L G
Sbjct: 969  ALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLSLQENSLGMDGVICVATALSG 1028

Query: 329  NKSLRELHLHGNSIGDEGIRAL 350
            N  L+ ++L GN IG+ G R +
Sbjct: 1029 NHGLQHINLQGNRIGESGARMI 1050


>gi|395835837|ref|XP_003790878.1| PREDICTED: protein NLRC3 [Otolemur garnettii]
          Length = 1065

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 155/433 (35%), Positives = 232/433 (53%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S   L     +L    S+ +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SPGVLQSLLPQLLYCQSLRLDTNQFQDPVMDLLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  +RD+GA+++AE
Sbjct: 685  ALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINHTLISLSLQSNTIRDDGARSMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L VL L  N I   G   +A+AL +N  ++ L L+ N  G  G  ALA+ ++ 
Sbjct: 745  ALASNRTLSVLHLQKNTIGPMGAQRMADALKQNKNLKELMLSSNSIGDGGTKALAEAMKV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+SL  L L  NSI D G+ ALM  L + +  L+ L++  NSIS +GA  VA  +    +
Sbjct: 805  NQSLESLDLQSNSISDVGVAALMGALCTNQTLLS-LNLRENSISPEGAQAVAHALCTNST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++NR +T++ L  N I +  A  + + L+ N  +TSL
Sbjct: 864  LRNLDLTANLLHDQGAQAIAAAVRENRALTSLHLQWNFIQASAAKVLGQALQLNRNLTSL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDEGASAVASALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  +A AL  N    +  +NL  N
Sbjct: 984  NAIGVAGAKALASALK-VNSSLRRLNLQENSLGMDGAICVATALSGNHR--LQHINLQGN 1040

Query: 569  FLTKFGQSALTDA 581
             + + G   +++A
Sbjct: 1041 HIGESGARMISEA 1053



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 192/370 (51%), Gaps = 1/370 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +++D+   + G +G   LA++L  N T   +S  +N I   G ++    L SN  L 
Sbjct: 694  RSLTTLDLRSNSIGPQGAKALADALKINHTLISLSLQSNTIRDDGARSMAEALASNRTLS 753

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L LSS  + D G KA+AE +K N  L  L+L
Sbjct: 754  VLHLQKNTIGPMGAQRMADALKQNKNLKELMLSSNSIGDGGTKALAEAMKVNQSLESLDL 813

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I   G  +L  AL  N T+ SL+L  N     GA A+A  L  N +LR L L  N 
Sbjct: 814  QSNSISDVGVAALMGALCTNQTLLSLNLRENSISPEGAQAVAHALCTNSTLRNLDLTANL 873

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G +A+ + +   +  L  L +  N I A  A  + + ++  ++L  ++L  N IGD
Sbjct: 874  LHDQGAQAIAAAVRENRA-LTSLHLQWNFIQASAAKVLGQALQLNRNLTSLDLQENAIGD 932

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EGA  +A ALK N  +T + L   +I + GA A+   L  N  +  LDL  N IG  GAK
Sbjct: 933  EGASAVASALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNAIGVAGAK 992

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA  VA  L  N+ +  ++L+ N + + GA+ +++
Sbjct: 993  ALASALKVNSSLRRLNLQENSLGMDGAICVATALSGNHRLQHINLQGNHIGESGARMISE 1052

Query: 522  SFKVVNEALT 531
            + K    A T
Sbjct: 1053 AIKTNAPACT 1062



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 136/253 (53%), Gaps = 4/253 (1%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           ++++ L  N I ++G +AL   L   +  L  LD+ +NSI  +GA  +A+ +K   +L+ 
Sbjct: 668 IQKISLAENQISNKGAKALARSLLVNR-SLTTLDLRSNSIGPQGAKALADALKINHTLIS 726

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N I D+GA  +A+AL  NRT++ + L  N I   GA  +A  LK N  +  L L+
Sbjct: 727 LSLQSNTIRDDGARSMAEALASNRTLSVLHLQKNTIGPMGAQRMADALKQNKNLKELMLS 786

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  G KAL+E +K + ++ +L L    I   G   +   L  N T+  L+LR N +
Sbjct: 787 SNSIGDGGTKALAEAMKVNQSLESLDLQSNSISDVGVAALMGALCTNQTLLSLNLRENSI 846

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
             EGA+ +A +    N  L ++DL  N + D GA AIA A++ N   A+TSL+L  NF+ 
Sbjct: 847 SPEGAQAVAHAL-CTNSTLRNLDLTANLLHDQGAQAIAAAVRENR--ALTSLHLQWNFIQ 903

Query: 572 KFGQSALTDAKDL 584
                 L  A  L
Sbjct: 904 ASAAKVLGQALQL 916


>gi|390471247|ref|XP_003734453.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3 [Callithrix jacchus]
          Length = 1187

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/432 (34%), Positives = 232/432 (53%), Gaps = 5/432 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 747  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 806

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    ++D+GA+++AE
Sbjct: 807  ALARSLLVNRSLTSLDLRGNSIGPQGAKGLADALKINRTLTSLSLQGNTIKDDGARSMAE 866

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L VL L  N I  +G   +A+AL +N +++ L L+ N  G  GA ALA+ L+G
Sbjct: 867  ALASNRTLSVLHLQKNSIGPTGAQWMADALKQNRSLKELMLSSNSIGDGGAKALAEALKG 926

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  ++   +
Sbjct: 927  NQGLESLDLQSNSISDTGVAALMGALCTNQALLS-LSLRENSISPEGAKAIARALRANST 985

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ +A A+++NR +T++ L  N I +  A  + + L+ N  +TSL
Sbjct: 986  LKNLDLTANLLHDQGAQAVAGAVRENRALTSLHLQWNFIQAGAAQVLGQALQLNRSLTSL 1045

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +G  A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 1046 DLQENDIGDEGVCAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 1105

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  IA AL  N    +  +NL  N
Sbjct: 1106 NAIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAIFIATALSGNHR--LQHINLQGN 1162

Query: 569  FLTKFGQSALTD 580
             +   G   +++
Sbjct: 1163 HIGDSGARMISE 1174



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/374 (33%), Positives = 196/374 (52%), Gaps = 2/374 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+ G + G +G   LA++L  N+T   +S   N I   G ++    L SN  L 
Sbjct: 816  RSLTSLDLRGNSIGPQGAKGLADALKINRTLTSLSLQGNTIKDDGARSMAEALASNRTLS 875

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L LSS  + D GAKA+AE LK N  L  L+L
Sbjct: 876  VLHLQKNSIGPTGAQWMADALKQNRSLKELMLSSNSIGDGGAKALAEALKGNQGLESLDL 935

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G  +L  AL  N  + SL L  N     GA A+A+ L  N +L+ L L  N 
Sbjct: 936  QSNSISDTGVAALMGALCTNQALLSLSLRENSISPEGAKAIARALRANSTLKNLDLTANL 995

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G +A+   +   +  L  L +  N I A  A  + + ++  +SL  ++L  NDIGD
Sbjct: 996  LHDQGAQAVAGAVRENRA-LTSLHLQWNFIQAGAAQVLGQALQLNRSLTSLDLQENDIGD 1054

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EG   +A ALK N  +T + L   +I + GA  +   L  N  +  LDL  N IG  GAK
Sbjct: 1055 EGVCAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAK 1114

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA F+A  L  N+ +  ++L+ N + D GA+ +++
Sbjct: 1115 ALANALKVNSSLRRLNLQENSLGMDGAIFIATALSGNHRLQHINLQGNHIGDSGARMISE 1174

Query: 522  SFKVVNEALTSIDL 535
              K  N  + ++++
Sbjct: 1175 VIK-TNAPMCTVEM 1187


>gi|320170161|gb|EFW47060.1| hypothetical protein CAOG_05004 [Capsaspora owczarzaki ATCC 30864]
          Length = 1342

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/413 (35%), Positives = 228/413 (55%), Gaps = 20/413 (4%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           +  GD+    +AE+L  N T  ++  + + I   G +A    L+ N  L  L+L GN IG
Sbjct: 8   QKIGDDEAQAIAEALKVNTTLTQLDLSDDKIGDVGAQAIAEALKVNTTLIQLHLHGNQIG 67

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
           D G + L + L  N  + +L L    +   GA+AIAE LK N+ L  L L  N I + G 
Sbjct: 68  DAGTQALAEALKVNTTLTQLHLQRNQIGHVGAQAIAEALKVNTALIQLHLQRNQIGHVGA 127

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            ++AEAL  N T+  ++L+ N  G  GA A+A+ L+ N +L +L L  N IGD G +A+ 
Sbjct: 128 QAIAEALKVNPTLTQVNLHSNRVGDAGAQAIAEALKVNTTLTQLDLFSNEIGDAGAQAIA 187

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             +      L  LD+ +N I   GA  +AE +K   +L  + L  N IGD GA+ IA+AL
Sbjct: 188 DAVKG-NTTLTQLDLSSNKIDRVGAQAIAEALKANTTLTQLYLQRNQIGDVGAQAIAEAL 246

Query: 412 KQNRTITTIDLGGNNIHS---KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           K N T+T ++L  N I+     GA AIA VLK N+ +T LDL  N +G  GA+A++E LK
Sbjct: 247 KINTTLTQLELFNNQINQVGDVGAQAIAEVLKVNTTLTQLDLRGNQVGDVGAQAIAEALK 306

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL-------------DLRANGLRDEG 515
            +  +  L LGW ++G +GA+ +AD L+ N  +  L              + +N + D G
Sbjct: 307 VNTALIQLDLGWNKVGDAGAQAIADALKGNTALIQLVSTSEEYDLAKPQSVDSNRVGDAG 366

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           A+ ++++  + N  L +++L  N+I+D GA +I++AL+ N    + +LNLA N
Sbjct: 367 ARSVSEAL-LKNTTLQNLNLWLNQIKDAGARSISEALQKN--TTLQNLNLAEN 416



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/325 (41%), Positives = 192/325 (59%), Gaps = 7/325 (2%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D+ A+AIAE LK N+ L  L+L+++ I   G  ++AEAL  N+T+  LHL+GN  G  G 
Sbjct: 12  DDEAQAIAEALKVNTTLTQLDLSDDKIGDVGAQAIAEALKVNTTLIQLHLHGNQIGDAGT 71

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            ALA+ L+ N +L +LHL  N IG  G +A+   L      L  L +  N I   GA  +
Sbjct: 72  QALAEALKVNTTLTQLHLQRNQIGHVGAQAIAEALKVNTA-LIQLHLQRNQIGHVGAQAI 130

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE +K   +L  +NL+ N +GD GA+ IA+ALK N T+T +DL  N I   GA AIA  +
Sbjct: 131 AEALKVNPTLTQVNLHSNRVGDAGAQAIAEALKVNTTLTQLDLFSNEIGDAGAQAIADAV 190

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           K N+ +T LDL+ N I   GA+A++E LK +  +  L L   QIG  GA+ +A+ L+ N 
Sbjct: 191 KGNTTLTQLDLSSNKIDRVGAQAIAEALKANTTLTQLYLQRNQIGDVGAQAIAEALKINT 250

Query: 500 TISILDL---RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           T++ L+L   + N + D GA+ +A+  K VN  LT +DL  N++ D GA AIA+ALK N 
Sbjct: 251 TLTQLELFNNQINQVGDVGAQAIAEVLK-VNTTLTQLDLRGNQVGDVGAQAIAEALKVN- 308

Query: 557 DVAVTSLNLANNFLTKFGQSALTDA 581
             A+  L+L  N +   G  A+ DA
Sbjct: 309 -TALIQLDLGWNKVGDAGAQAIADA 332



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 185/375 (49%), Gaps = 17/375 (4%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L E  K     + + +     G  G   +AE+L  N    ++    N I   G +A  
Sbjct: 72  QALAEALKVNTTLTQLHLQRNQIGHVGAQAIAEALKVNTALIQLHLQRNQIGHVGAQAIA 131

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  +NL  N +GD G + + + L  N  + +L L S ++ D GA+AIA+ +K
Sbjct: 132 EALKVNPTLTQVNLHSNRVGDAGAQAIAEALKVNTTLTQLDLFSNEIGDAGAQAIADAVK 191

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  L+L++N ID  G  ++AEAL  N+T+  L+L  N  G +GA A+A+ L+ N +
Sbjct: 192 GNTTLTQLDLSSNKIDRVGAQAIAEALKANTTLTQLYLQRNQIGDVGAQAIAEALKINTT 251

Query: 332 LRELHLHGNSI---GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           L +L L  N I   GD G +A+   L      L  LD+  N +   GA  +AE +K   +
Sbjct: 252 LTQLELFNNQINQVGDVGAQAIAEVLKV-NTTLTQLDLRGNQVGDVGAQAIAEALKVNTA 310

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTI-------DLG------GNNIHSKGASAI 435
           L+ ++L  N +GD GA+ IADALK N  +  +       DL        N +   GA ++
Sbjct: 311 LIQLDLGWNKVGDAGAQAIADALKGNTALIQLVSTSEEYDLAKPQSVDSNRVGDAGARSV 370

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           +  L  N+ + +L+L  N I   GA+++SE L+ +  +  L L   +IG      +   +
Sbjct: 371 SEALLKNTTLQNLNLWLNQIKDAGARSISEALQKNTTLQNLNLAENRIGYVEETVLRHSI 430

Query: 496 RYNNTISILDLRANG 510
                + I D R +G
Sbjct: 431 HPTLQLHIADQRRSG 445



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/252 (36%), Positives = 145/252 (57%), Gaps = 4/252 (1%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD+  +A+   L      L  LD+ ++ I   GA  +AE +K   +L+ ++L+ N IGD
Sbjct: 10  IGDDEAQAIAEALKV-NTTLTQLDLSDDKIGDVGAQAIAEALKVNTTLIQLHLHGNQIGD 68

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            G + +A+ALK N T+T + L  N I   GA AIA  LK N+ +  L L  N IG  GA+
Sbjct: 69  AGTQALAEALKVNTTLTQLHLQRNQIGHVGAQAIAEALKVNTALIQLHLQRNQIGHVGAQ 128

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           A++E LK +  +  + L   ++G +GA+ +A+ L+ N T++ LDL +N + D GA+ +A 
Sbjct: 129 AIAEALKVNPTLTQVNLHSNRVGDAGAQAIAEALKVNTTLTQLDLFSNEIGDAGAQAIAD 188

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           + K  N  LT +DL+ N+I   GA AIA+ALKAN    +T L L  N +   G  A+ +A
Sbjct: 189 AVK-GNTTLTQLDLSSNKIDRVGAQAIAEALKAN--TTLTQLYLQRNQIGDVGAQAIAEA 245

Query: 582 KDLVYEMSEKEV 593
             +   +++ E+
Sbjct: 246 LKINTTLTQLEL 257



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 109/192 (56%), Gaps = 3/192 (1%)

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           +W       IGD+ A+ IA+ALK N T+T +DL  + I   GA AIA  LK N+ +  L 
Sbjct: 1   MWRQFEFQKIGDDEAQAIAEALKVNTTLTQLDLSDDKIGDVGAQAIAEALKVNTTLIQLH 60

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L  N IG  G +AL+E LK +  +  L L   QIG  GA+ +A+ L+ N  +  L L+ N
Sbjct: 61  LHGNQIGDAGTQALAEALKVNTTLTQLHLQRNQIGHVGAQAIAEALKVNTALIQLHLQRN 120

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
            +   GA+ +A++ K VN  LT ++L  N + D GA AIA+ALK N    +T L+L +N 
Sbjct: 121 QIGHVGAQAIAEALK-VNPTLTQVNLHSNRVGDAGAQAIAEALKVN--TTLTQLDLFSNE 177

Query: 570 LTKFGQSALTDA 581
           +   G  A+ DA
Sbjct: 178 IGDAGAQAIADA 189



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 16/217 (7%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           + K+ R   Q + E  K     + + +     GD G   +AE+L  N T  ++    N I
Sbjct: 203 SNKIDRVGAQAIAEALKANTTLTQLYLQRNQIGDVGAQAIAEALKINTTLTQLELFNNQI 262

Query: 203 TAAG---IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
              G    +A   VL+ N  L  L+L GN +GD G + + + L  N  + +L L    + 
Sbjct: 263 NQVGDVGAQAIAEVLKVNTTLTQLDLRGNQVGDVGAQAIAEALKVNTALIQLDLGWNKVG 322

Query: 260 DEGAKAIAELLKNNSILRVL-------------ELNNNMIDYSGFTSLAEALLENSTIRS 306
           D GA+AIA+ LK N+ L  L              +++N +  +G  S++EALL+N+T+++
Sbjct: 323 DAGAQAIADALKGNTALIQLVSTSEEYDLAKPQSVDSNRVGDAGARSVSEALLKNTTLQN 382

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           L+L  N     GA ++++ L+ N +L+ L+L  N IG
Sbjct: 383 LNLWLNQIKDAGARSISEALQKNTTLQNLNLAENRIG 419


>gi|397488253|ref|XP_003815183.1| PREDICTED: protein NLRC3 isoform 2 [Pan paniscus]
          Length = 1112

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 157/433 (36%), Positives = 234/433 (54%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 672  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 731

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 732  ALARSLLVNRSLTSLDLRGNSIGPQGSKALADALKINRTLTSLSLQGNTVRDDGARSMAE 791

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L L+ N  G  GA ALA+ L+ 
Sbjct: 792  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKV 851

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  ++   +
Sbjct: 852  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALRANST 910

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 911  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 970

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR 
Sbjct: 971  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRG 1030

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  IA AL  N    +  +NL  N
Sbjct: 1031 NAIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAICIATALSGNHR--LQHINLQGN 1087

Query: 569  FLTKFGQSALTDA 581
             +   G   +++A
Sbjct: 1088 HIGDSGARMISEA 1100



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 190/364 (52%), Gaps = 1/364 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+ G + G +G   LA++L  N+T   +S   N +   G ++    L SN  L 
Sbjct: 741  RSLTSLDLRGNSIGPQGSKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 800

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L LSS  + D GAKA+AE LK N  L  L+L
Sbjct: 801  MLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDL 860

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G  +L  AL  N T+ SL L  N     GA A+A  L  N +L+ L L  N 
Sbjct: 861  QSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANL 920

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G RA+   +   +  L  L +  N I A  A  + + ++  +SL  ++L  N IGD
Sbjct: 921  LHDQGARAIAVAVRENR-TLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 979

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            +GA  +A ALK N  +T + L   +I + GA  +   L  N  +  LDL  N IG  GAK
Sbjct: 980  DGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAK 1039

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA  +A  L  N+ +  ++L+ N + D GA+ +++
Sbjct: 1040 ALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISE 1099

Query: 522  SFKV 525
            + K 
Sbjct: 1100 AIKT 1103



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 67/141 (47%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+     GD+G   +A +L  N     +      I A+G +     L  N  L+
Sbjct: 965  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLE 1024

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L GN IG  G K L + L  N+ + RL L    L  +GA  IA  L  N  L+ + L
Sbjct: 1025 ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 1084

Query: 282  NNNMIDYSGFTSLAEALLENS 302
              N I  SG   ++EA+  N+
Sbjct: 1085 QGNHIGDSGARMISEAIKTNA 1105



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A +++ +   + G  G   L E+L  N+T E +    N I  AG KA    L+ N +L+ 
Sbjct: 994  ALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRR 1053

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N +G +G  C+   L  N  ++ + L    + D GA+ I+E +K N+    +E+
Sbjct: 1054 LNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1112


>gi|397488251|ref|XP_003815182.1| PREDICTED: protein NLRC3 isoform 1 [Pan paniscus]
          Length = 1065

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 157/433 (36%), Positives = 234/433 (54%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 685  ALARSLLVNRSLTSLDLRGNSIGPQGSKALADALKINRTLTSLSLQGNTVRDDGARSMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L L+ N  G  GA ALA+ L+ 
Sbjct: 745  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  ++   +
Sbjct: 805  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALRANST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 864  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  IA AL  N    +  +NL  N
Sbjct: 984  NAIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAICIATALSGNHR--LQHINLQGN 1040

Query: 569  FLTKFGQSALTDA 581
             +   G   +++A
Sbjct: 1041 HIGDSGARMISEA 1053



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 190/364 (52%), Gaps = 1/364 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+ G + G +G   LA++L  N+T   +S   N +   G ++    L SN  L 
Sbjct: 694  RSLTSLDLRGNSIGPQGSKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 753

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L LSS  + D GAKA+AE LK N  L  L+L
Sbjct: 754  MLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDL 813

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G  +L  AL  N T+ SL L  N     GA A+A  L  N +L+ L L  N 
Sbjct: 814  QSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANL 873

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G RA+   +   +  L  L +  N I A  A  + + ++  +SL  ++L  N IGD
Sbjct: 874  LHDQGARAIAVAVRENR-TLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 932

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            +GA  +A ALK N  +T + L   +I + GA  +   L  N  +  LDL  N IG  GAK
Sbjct: 933  DGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAK 992

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA  +A  L  N+ +  ++L+ N + D GA+ +++
Sbjct: 993  ALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISE 1052

Query: 522  SFKV 525
            + K 
Sbjct: 1053 AIKT 1056



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 67/141 (47%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+     GD+G   +A +L  N     +      I A+G +     L  N  L+
Sbjct: 918  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLE 977

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L GN IG  G K L + L  N+ + RL L    L  +GA  IA  L  N  L+ + L
Sbjct: 978  ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 1037

Query: 282  NNNMIDYSGFTSLAEALLENS 302
              N I  SG   ++EA+  N+
Sbjct: 1038 QGNHIGDSGARMISEAIKTNA 1058



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A +++ +   + G  G   L E+L  N+T E +    N I  AG KA    L+ N +L+ 
Sbjct: 947  ALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRR 1006

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N +G +G  C+   L  N  ++ + L    + D GA+ I+E +K N+    +E+
Sbjct: 1007 LNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1065


>gi|440901436|gb|ELR52378.1| Protein NLRC3 [Bos grunniens mutus]
          Length = 1089

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 151/433 (34%), Positives = 231/433 (53%), Gaps = 6/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S   L     +L    S+ +    F D  +  L   L G +   + +S A N I+  G K
Sbjct: 650  SPGVLQSLLPQLLYCRSLRLDTNQFQDPVMELLGSVLSGKDCHIQRISLAENQISNKGAK 709

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  +RD+GA+++AE
Sbjct: 710  ALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGARSMAE 769

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L  
Sbjct: 770  ALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELMFSSNSIGDGGAKALAEALMV 829

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L+ L   G   G    RALM  L + +  L+ L++  NSIS +GA  +A  ++   +
Sbjct: 830  NQGLKSLDWQGLDCGARE-RALMGALCTNQTLLS-LNLRENSISPEGAQDLARALRTNST 887

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ +A+A+++NRT+T++ L  N I +  A A+ + L+ N+ +TSL
Sbjct: 888  LKSLDLTANLLHDQGAQAVAEAVRENRTLTSLHLQWNFIQAGAAKALGQALQLNTSLTSL 947

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 948  DLQENAIGDEGASAVASALKVNTVLTALYLQVASIGAPGAQALGEALAVNRTLEILDLRG 1007

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  +GA  +A AL  N    +  +NL  N
Sbjct: 1008 NTIEVAGAKALANALK-VNSSLRRLNLQENSLGMEGAICVATALSGNH--GLRHINLQGN 1064

Query: 569  FLTKFGQSALTDA 581
             + + G   +++A
Sbjct: 1065 HIGESGARMISEA 1077



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/339 (33%), Positives = 166/339 (48%), Gaps = 6/339 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 747  RTLASLSLQSNRIRDDGARSMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLK 806

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK--AIAELLKNNSILRVL 279
             L  S N IGD G K L + L+ N G++ L    +D    GA+  A+   L  N  L  L
Sbjct: 807  ELMFSSNSIGDGGAKALAEALMVNQGLKSLDWQGLDC---GARERALMGALCTNQTLLSL 863

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L  N I   G   LA AL  NST++SL L  N     GA A+A+ +  N++L  LHL  
Sbjct: 864  NLRENSISPEGAQDLARALRTNSTLKSLDLTANLLHDQGAQAVAEAVRENRTLTSLHLQW 923

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N I     +AL   L      L  LD+  N+I  +GA  VA  +K    L  + L +  I
Sbjct: 924  NFIQAGAAKALGQALQLNT-SLTSLDLQENAIGDEGASAVASALKVNTVLTALYLQVASI 982

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            G  GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G +G
Sbjct: 983  GAPGAQALGEALAVNRTLEILDLRGNTIEVAGAKALANALKVNSSLRRLNLQENSLGMEG 1042

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            A  ++  L  +  +  + L    IG SGA  +++ ++ N
Sbjct: 1043 AICVATALSGNHGLRHINLQGNHIGESGARMISEAIKTN 1081



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 185/370 (50%), Gaps = 14/370 (3%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +++D+   + G +G   LA++L  N+T   +S  +N I   G ++    L +N  L 
Sbjct: 719  RSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGARSMAEALATNRTLS 778

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L  SS  + D GAKA+AE L  N  L+ L  
Sbjct: 779  VLHLQKNSIGPVGTQQMADALKQNRSLKELMFSSNSIGDGGAKALAEALMVNQGLKSL-- 836

Query: 282  NNNMIDYSGF------TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
                 D+ G        +L  AL  N T+ SL+L  N     GA  LA+ L  N +L+ L
Sbjct: 837  -----DWQGLDCGARERALMGALCTNQTLLSLNLRENSISPEGAQDLARALRTNSTLKSL 891

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L  N + D+G +A+   +   +  L  L +  N I A  A  + + ++   SL  ++L 
Sbjct: 892  DLTANLLHDQGAQAVAEAVRENR-TLTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQ 950

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             N IGDEGA  +A ALK N  +T + L   +I + GA A+   L  N  +  LDL  N I
Sbjct: 951  ENAIGDEGASAVASALKVNTVLTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNTI 1010

Query: 456  GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
               GAKAL+  LK + ++  L L    +G  GA  VA  L  N+ +  ++L+ N + + G
Sbjct: 1011 EVAGAKALANALKVNSSLRRLNLQENSLGMEGAICVATALSGNHGLRHINLQGNHIGESG 1070

Query: 516  AKCLAQSFKV 525
            A+ ++++ K 
Sbjct: 1071 ARMISEAIKT 1080



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 65/140 (46%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + +S+D+     GDEG   +A +L  N     +      I A G +A    L  N  L+ 
Sbjct: 943  SLTSLDLQENAIGDEGASAVASALKVNTVLTALYLQVASIGAPGAQALGEALAVNRTLEI 1002

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L+L GN I   G K L + L  N+ + RL L    L  EGA  +A  L  N  LR + L 
Sbjct: 1003 LDLRGNTIEVAGAKALANALKVNSSLRRLNLQENSLGMEGAICVATALSGNHGLRHINLQ 1062

Query: 283  NNMIDYSGFTSLAEALLENS 302
             N I  SG   ++EA+  N+
Sbjct: 1063 GNHIGESGARMISEAIKTNA 1082


>gi|326679847|ref|XP_002666753.2| PREDICTED: protein NLRC3-like [Danio rerio]
          Length = 1127

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 147/430 (34%), Positives = 228/430 (53%), Gaps = 5/430 (1%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            +L     +L   S + M    F +  +  L   L   +   + +S A N I++ G+K   
Sbjct: 690  SLKRLLPQLLYCSKLRMENNEFKEGAMELLGSLLSAKECHIQMLSLADNSISSKGVKPLS 749

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N  L TL+L GN IG +G K LC+ L  N  +  + L +  + DEGA++++E+L+
Sbjct: 750  RALLVNRTLTTLDLRGNNIGAKGAKTLCEALKLNQFLVSVNLQNNHIEDEGARSLSEVLQ 809

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +N  L  L +  N I   G   +AE L++N T++  +++ N+ G LG  ALA+ L  N  
Sbjct: 810  SNRKLTTLNVQKNGIGPEGMKKIAEGLIKNQTLQDFNVSSNHLGDLGTVALAQALMVNHV 869

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L L  NS+ D GI+AL   L S +G L  L++  NSI   GA  +A+ +K    L  
Sbjct: 870  LHTLSLQSNSVSDRGIKALSHALQSNRG-LCCLNLRENSIGVAGAKDIAKALKVNTCLRE 928

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            ++L  N + DEG   IA+A++ NR+I+++ L  N + +  A A+A  L  N+ I  LDL 
Sbjct: 929  LDLTANLLHDEGVTAIAEAMRVNRSISSLHLQWNFMKAGAAKALAESLSSNTCIQLLDLQ 988

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             N +G +G  AL+  L  + ++  L L     G SGA  +AD +  N T+  LDLR N +
Sbjct: 989  ENALGDNGVIALAAALMSNSSLTVLYLQGVSAGKSGAVALADAMVVNKTLHTLDLRGNSI 1048

Query: 512  RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
              EGAK  + + K  N +L S++L  N +  DGA  IA AL+ N    +T +NL  N + 
Sbjct: 1049 GMEGAKAFSSALK-NNRSLRSLNLQENSLGMDGAIFIATALRGNHQ--LTYINLQGNGIG 1105

Query: 572  KFGQSALTDA 581
            + G   ++DA
Sbjct: 1106 ESGAKVVSDA 1115



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/363 (33%), Positives = 194/363 (53%), Gaps = 1/363 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +++D+ G N G +G   L E+L  NQ    V+   N I   G ++   VLQSN  L 
Sbjct: 756  RTLTTLDLRGNNIGAKGAKTLCEALKLNQFLVSVNLQNNHIEDEGARSLSEVLQSNRKLT 815

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TLN+  N IG EG+K + + L+ N  ++   +SS  L D G  A+A+ L  N +L  L L
Sbjct: 816  TLNVQKNGIGPEGMKKIAEGLIKNQTLQDFNVSSNHLGDLGTVALAQALMVNHVLHTLSL 875

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N +   G  +L+ AL  N  +  L+L  N  G  GA  +AK L+ N  LREL L  N 
Sbjct: 876  QSNSVSDRGIKALSHALQSNRGLCCLNLRENSIGVAGAKDIAKALKVNTCLRELDLTANL 935

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + DEG+ A+   +   +  ++ L +  N + A  A  +AE + +   +  ++L  N +GD
Sbjct: 936  LHDEGVTAIAEAMRVNRS-ISSLHLQWNFMKAGAAKALAESLSSNTCIQLLDLQENALGD 994

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             G   +A AL  N ++T + L G +    GA A+A  +  N  + +LDL  N IG +GAK
Sbjct: 995  NGVIALAAALMSNSSLTVLYLQGVSAGKSGAVALADAMVVNKTLHTLDLRGNSIGMEGAK 1054

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            A S  LK + ++ +L L    +G  GA F+A  LR N+ ++ ++L+ NG+ + GAK ++ 
Sbjct: 1055 AFSSALKNNRSLRSLNLQENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSD 1114

Query: 522  SFK 524
            + K
Sbjct: 1115 AIK 1117



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/320 (35%), Positives = 175/320 (54%), Gaps = 1/320 (0%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  ++L+E  +  R  +++++     G EG+  +AE L  NQT ++ + ++N +   G  
Sbjct: 799  EGARSLSEVLQSNRKLTTLNVQKNGIGPEGMKKIAEGLIKNQTLQDFNVSSNHLGDLGTV 858

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N  L TL+L  N + D G+K L   L  N G+  L L    +   GAK IA+
Sbjct: 859  ALAQALMVNHVLHTLSLQSNSVSDRGIKALSHALQSNRGLCCLNLRENSIGVAGAKDIAK 918

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             LK N+ LR L+L  N++   G T++AEA+  N +I SLHL  N+  A  A ALA+ L  
Sbjct: 919  ALKVNTCLRELDLTANLLHDEGVTAIAEAMRVNRSISSLHLQWNFMKAGAAKALAESLSS 978

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N  ++ L L  N++GD G+ AL + L S    L VL +   S    GA  +A+ +   K+
Sbjct: 979  NTCIQLLDLQENALGDNGVIALAAALMS-NSSLTVLYLQGVSAGKSGAVALADAMVVNKT 1037

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N IG EGA+  + ALK NR++ +++L  N++   GA  IA  L+ N  +T +
Sbjct: 1038 LHTLDLRGNSIGMEGAKAFSSALKNNRSLRSLNLQENSLGMDGAIFIATALRGNHQLTYI 1097

Query: 449  DLAYNPIGADGAKALSEVLK 468
            +L  N IG  GAK +S+ +K
Sbjct: 1098 NLQGNGIGESGAKVVSDAIK 1117



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 179/355 (50%), Gaps = 1/355 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E  K  +   SV++   +  DEG   L+E L  N+    ++   NGI   G+K   
Sbjct: 774  KTLCEALKLNQFLVSVNLQNNHIEDEGARSLSEVLQSNRKLTTLNVQKNGIGPEGMKKIA 833

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N  L+  N+S N +GD G   L   L+ N  +  L L S  + D G KA++  L+
Sbjct: 834  EGLIKNQTLQDFNVSSNHLGDLGTVALAQALMVNHVLHTLSLQSNSVSDRGIKALSHALQ 893

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +N  L  L L  N I  +G   +A+AL  N+ +R L L  N     G  A+A+ +  N+S
Sbjct: 894  SNRGLCCLNLRENSIGVAGAKDIAKALKVNTCLRELDLTANLLHDEGVTAIAEAMRVNRS 953

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            +  LHL  N +     +AL   LSS    + +LD+  N++   G   +A  + +  SL  
Sbjct: 954  ISSLHLQWNFMKAGAAKALAESLSSNTC-IQLLDLQENALGDNGVIALAAALMSNSSLTV 1012

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            + L     G  GA  +ADA+  N+T+ T+DL GN+I  +GA A +  LK+N  + SL+L 
Sbjct: 1013 LYLQGVSAGKSGAVALADAMVVNKTLHTLDLRGNSIGMEGAKAFSSALKNNRSLRSLNLQ 1072

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             N +G DGA  ++  L+ +  +  + L    IG SGA+ V+D ++      ++D+
Sbjct: 1073 ENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSDAIKAGAPDCVVDI 1127


>gi|118918429|ref|NP_849172.2| protein NLRC3 [Homo sapiens]
 gi|158563940|sp|Q7RTR2.2|NLRC3_HUMAN RecName: Full=Protein NLRC3; AltName: Full=CARD15-like protein;
            AltName: Full=Caterpiller protein 16.2; Short=CLR16.2;
            AltName: Full=Nucleotide-binding oligomerization domain
            protein 3
 gi|54633547|gb|AAT48367.1| caterpiller 16.2 [Homo sapiens]
 gi|119605756|gb|EAW85350.1| NOD3 protein, isoform CRA_c [Homo sapiens]
 gi|227809550|gb|ACP40993.1| NLRC3 [Homo sapiens]
          Length = 1065

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 156/433 (36%), Positives = 232/433 (53%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 685  ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 745  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  +    +
Sbjct: 805  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALCANST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 864  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  IA AL  N    +  +NL  N
Sbjct: 984  NAIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAICIATALSGNHR--LQHINLQGN 1040

Query: 569  FLTKFGQSALTDA 581
             +   G   +++A
Sbjct: 1041 HIGDSGARMISEA 1053



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 189/364 (51%), Gaps = 1/364 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+ G + G +G   LA++L  N+T   +S   N +   G ++    L SN  L 
Sbjct: 694  RSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 753

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L  SS  + D GAKA+AE LK N  L  L+L
Sbjct: 754  MLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDL 813

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G  +L  AL  N T+ SL L  N     GA A+A  L  N +L+ L L  N 
Sbjct: 814  QSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANL 873

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G RA+   +   +  L  L +  N I A  A  + + ++  +SL  ++L  N IGD
Sbjct: 874  LHDQGARAIAVAVRENR-TLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 932

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            +GA  +A ALK N  +T + L   +I + GA  +   L  N  +  LDL  N IG  GAK
Sbjct: 933  DGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAK 992

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA  +A  L  N+ +  ++L+ N + D GA+ +++
Sbjct: 993  ALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISE 1052

Query: 522  SFKV 525
            + K 
Sbjct: 1053 AIKT 1056



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 67/141 (47%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+     GD+G   +A +L  N     +      I A+G +     L  N  L+
Sbjct: 918  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLE 977

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L GN IG  G K L + L  N+ + RL L    L  +GA  IA  L  N  L+ + L
Sbjct: 978  ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 1037

Query: 282  NNNMIDYSGFTSLAEALLENS 302
              N I  SG   ++EA+  N+
Sbjct: 1038 QGNHIGDSGARMISEAIKTNA 1058



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A +++ +   + G  G   L E+L  N+T E +    N I  AG KA    L+ N +L+ 
Sbjct: 947  ALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRR 1006

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N +G +G  C+   L  N  ++ + L    + D GA+ I+E +K N+    +E+
Sbjct: 1007 LNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1065


>gi|119605757|gb|EAW85351.1| NOD3 protein, isoform CRA_d [Homo sapiens]
          Length = 1112

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 156/433 (36%), Positives = 232/433 (53%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 672  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 731

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 732  ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 791

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 792  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKV 851

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  +    +
Sbjct: 852  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALCANST 910

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 911  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 970

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR 
Sbjct: 971  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRG 1030

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  IA AL  N    +  +NL  N
Sbjct: 1031 NAIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAICIATALSGNHR--LQHINLQGN 1087

Query: 569  FLTKFGQSALTDA 581
             +   G   +++A
Sbjct: 1088 HIGDSGARMISEA 1100



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 189/364 (51%), Gaps = 1/364 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+ G + G +G   LA++L  N+T   +S   N +   G ++    L SN  L 
Sbjct: 741  RSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 800

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L  SS  + D GAKA+AE LK N  L  L+L
Sbjct: 801  MLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDL 860

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G  +L  AL  N T+ SL L  N     GA A+A  L  N +L+ L L  N 
Sbjct: 861  QSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANL 920

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G RA+   +   +  L  L +  N I A  A  + + ++  +SL  ++L  N IGD
Sbjct: 921  LHDQGARAIAVAVRENR-TLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 979

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            +GA  +A ALK N  +T + L   +I + GA  +   L  N  +  LDL  N IG  GAK
Sbjct: 980  DGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAK 1039

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA  +A  L  N+ +  ++L+ N + D GA+ +++
Sbjct: 1040 ALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISE 1099

Query: 522  SFKV 525
            + K 
Sbjct: 1100 AIKT 1103



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 67/141 (47%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+     GD+G   +A +L  N     +      I A+G +     L  N  L+
Sbjct: 965  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLE 1024

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L GN IG  G K L + L  N+ + RL L    L  +GA  IA  L  N  L+ + L
Sbjct: 1025 ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 1084

Query: 282  NNNMIDYSGFTSLAEALLENS 302
              N I  SG   ++EA+  N+
Sbjct: 1085 QGNHIGDSGARMISEAIKTNA 1105



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A +++ +   + G  G   L E+L  N+T E +    N I  AG KA    L+ N +L+ 
Sbjct: 994  ALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRR 1053

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N +G +G  C+   L  N  ++ + L    + D GA+ I+E +K N+    +E+
Sbjct: 1054 LNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1112


>gi|30348948|tpg|DAA01245.1| TPA_inf: NOD3 [Homo sapiens]
          Length = 1112

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 156/433 (36%), Positives = 232/433 (53%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 672  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 731

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 732  ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 791

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 792  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKV 851

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  +    +
Sbjct: 852  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALCANST 910

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 911  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 970

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR 
Sbjct: 971  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRG 1030

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  IA AL  N    +  +NL  N
Sbjct: 1031 NAIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAICIATALSGNHR--LQHINLQGN 1087

Query: 569  FLTKFGQSALTDA 581
             +   G   +++A
Sbjct: 1088 HIGDSGARMISEA 1100



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 189/364 (51%), Gaps = 1/364 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+ G + G +G   LA++L  N+T   +S   N +   G ++    L SN  L 
Sbjct: 741  RSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 800

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L  SS  + D GAKA+AE LK N  L  L+L
Sbjct: 801  MLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDL 860

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G  +L  AL  N T+ SL L  N     GA A+A  L  N +L+ L L  N 
Sbjct: 861  QSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANL 920

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G RA+   +   +  L  L +  N I A  A  + + ++  +SL  ++L  N IGD
Sbjct: 921  LHDQGARAIAVAVRENR-TLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 979

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            +GA  +A ALK N  +T + L   +I + GA  +   L  N  +  LDL  N IG  GAK
Sbjct: 980  DGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAK 1039

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA  +A  L  N+ +  ++L+ N + D GA+ +++
Sbjct: 1040 ALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISE 1099

Query: 522  SFKV 525
            + K 
Sbjct: 1100 AIKT 1103



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 67/141 (47%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+     GD+G   +A +L  N     +      I A+G +     L  N  L+
Sbjct: 965  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLE 1024

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L GN IG  G K L + L  N+ + RL L    L  +GA  IA  L  N  L+ + L
Sbjct: 1025 ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 1084

Query: 282  NNNMIDYSGFTSLAEALLENS 302
              N I  SG   ++EA+  N+
Sbjct: 1085 QGNHIGDSGARMISEAIKTNA 1105



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A +++ +   + G  G   L E+L  N+T E +    N I  AG KA    L+ N +L+ 
Sbjct: 994  ALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRR 1053

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N +G +G  C+   L  N  ++ + L    + D GA+ I+E +K N+    +E+
Sbjct: 1054 LNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1112


>gi|426380992|ref|XP_004057141.1| PREDICTED: protein NLRC3 isoform 2 [Gorilla gorilla gorilla]
          Length = 1112

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 155/433 (35%), Positives = 232/433 (53%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 672  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 731

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L  N IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 732  ALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 791

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L L+ N  G  GA ALA+ L+ 
Sbjct: 792  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKV 851

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  ++   +
Sbjct: 852  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALRANST 910

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 911  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 970

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 971  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 1030

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  IA AL  N    +  +NL  N
Sbjct: 1031 NAIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAICIATALSGNHR--LQHINLQGN 1087

Query: 569  FLTKFGQSALTDA 581
             +   G   +++A
Sbjct: 1088 HIGDSGARMISEA 1100



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 189/364 (51%), Gaps = 1/364 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+   + G +G   LA++L  N+T   +S   N +   G ++    L SN  L 
Sbjct: 741  RSLTSLDLRSNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 800

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L LSS  + D GAKA+AE LK N  L  L+L
Sbjct: 801  MLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDL 860

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G  +L  AL  N T+ SL L  N     GA A+A  L  N +L+ L L  N 
Sbjct: 861  QSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANL 920

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G RA+   +   +  L  L +  N I A  A  + + ++  +SL  ++L  N IGD
Sbjct: 921  LHDQGARAIAVAVRENR-TLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 979

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            +GA  +A ALK N  +T + L   +I + GA  +   L  N  +  LDL  N IG  GAK
Sbjct: 980  DGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAK 1039

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA  +A  L  N+ +  ++L+ N + D GA+ +++
Sbjct: 1040 ALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISE 1099

Query: 522  SFKV 525
            + K 
Sbjct: 1100 AIKT 1103



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 66/141 (46%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+     GD+G   +A +L  N     +      I A G +     L  N  L+
Sbjct: 965  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLE 1024

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L GN IG  G K L + L  N+ + RL L    L  +GA  IA  L  N  L+ + L
Sbjct: 1025 ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 1084

Query: 282  NNNMIDYSGFTSLAEALLENS 302
              N I  SG   ++EA+  N+
Sbjct: 1085 QGNHIGDSGARMISEAIKTNA 1105



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A +++ +   + G  G   L E+L  N+T E +    N I  AG KA    L+ N +L+ 
Sbjct: 994  ALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRR 1053

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N +G +G  C+   L  N  ++ + L    + D GA+ I+E +K N+    +E+
Sbjct: 1054 LNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1112


>gi|426380990|ref|XP_004057140.1| PREDICTED: protein NLRC3 isoform 1 [Gorilla gorilla gorilla]
          Length = 1065

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 155/433 (35%), Positives = 232/433 (53%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L  N IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 685  ALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L L+ N  G  GA ALA+ L+ 
Sbjct: 745  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  ++   +
Sbjct: 805  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALRANST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 864  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  IA AL  N    +  +NL  N
Sbjct: 984  NAIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAICIATALSGNHR--LQHINLQGN 1040

Query: 569  FLTKFGQSALTDA 581
             +   G   +++A
Sbjct: 1041 HIGDSGARMISEA 1053



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 189/364 (51%), Gaps = 1/364 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+   + G +G   LA++L  N+T   +S   N +   G ++    L SN  L 
Sbjct: 694  RSLTSLDLRSNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 753

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L LSS  + D GAKA+AE LK N  L  L+L
Sbjct: 754  MLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDL 813

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G  +L  AL  N T+ SL L  N     GA A+A  L  N +L+ L L  N 
Sbjct: 814  QSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANL 873

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G RA+   +   +  L  L +  N I A  A  + + ++  +SL  ++L  N IGD
Sbjct: 874  LHDQGARAIAVAVRENR-TLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 932

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            +GA  +A ALK N  +T + L   +I + GA  +   L  N  +  LDL  N IG  GAK
Sbjct: 933  DGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAK 992

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA  +A  L  N+ +  ++L+ N + D GA+ +++
Sbjct: 993  ALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISE 1052

Query: 522  SFKV 525
            + K 
Sbjct: 1053 AIKT 1056



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 66/141 (46%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+     GD+G   +A +L  N     +      I A G +     L  N  L+
Sbjct: 918  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLE 977

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L GN IG  G K L + L  N+ + RL L    L  +GA  IA  L  N  L+ + L
Sbjct: 978  ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 1037

Query: 282  NNNMIDYSGFTSLAEALLENS 302
              N I  SG   ++EA+  N+
Sbjct: 1038 QGNHIGDSGARMISEAIKTNA 1058



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A +++ +   + G  G   L E+L  N+T E +    N I  AG KA    L+ N +L+ 
Sbjct: 947  ALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRR 1006

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N +G +G  C+   L  N  ++ + L    + D GA+ I+E +K N+    +E+
Sbjct: 1007 LNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1065


>gi|432111550|gb|ELK34664.1| Protein NLRC3 [Myotis davidii]
          Length = 1065

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/433 (35%), Positives = 228/433 (52%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +   + +S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCQSLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L  N IG +G K L D L  N  +  L L S  +RD+GAK +AE
Sbjct: 685  ALARSLLVNRSLTSLDLRCNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGAKFMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L V+ L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 745  ALAANRTLSVMHLQKNTIGPMGAQHMADALKQNRSLKELMFSSNSIGDGGAKALAEALKV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L++  NSIS +GA  +A  +    +
Sbjct: 805  NQGLETLDLQSNSISDTGVAALMGALCANRALLS-LNLRENSISPEGAQDLARALCTNST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++N T+ ++ L  N I +  A A+ + L+ N  + SL
Sbjct: 864  LKNLDLTANLLHDQGAQAIAMAVRENHTLMSLHLQWNFIQAGAAKALGQALQFNKSLISL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDEGACAVASALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DG   IA AL  N    +  +NL  N
Sbjct: 984  NAIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGMICIATALSGNH--GIQHINLQGN 1040

Query: 569  FLTKFGQSALTDA 581
             + + G   +++A
Sbjct: 1041 HIGESGARMISEA 1053



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 188/364 (51%), Gaps = 1/364 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+   + G +G   LA++L  N+T   +S  +N I   G K     L +N  L 
Sbjct: 694  RSLTSLDLRCNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGAKFMAEALAANRTLS 753

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             ++L  N IG  G + + D L  N  ++ L  SS  + D GAKA+AE LK N  L  L+L
Sbjct: 754  VMHLQKNTIGPMGAQHMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLETLDL 813

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G  +L  AL  N  + SL+L  N     GA  LA+ L  N +L+ L L  N 
Sbjct: 814  QSNSISDTGVAALMGALCANRALLSLNLRENSISPEGAQDLARALCTNSTLKNLDLTANL 873

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G +A+   +      L  L +  N I A  A  + + ++  KSL+ ++L  N IGD
Sbjct: 874  LHDQGAQAIAMAVRENH-TLMSLHLQWNFIQAGAAKALGQALQFNKSLISLDLQENAIGD 932

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EGA  +A ALK N  +T + L   +I + GA A+   L  N  +  LDL  N IG  GAK
Sbjct: 933  EGACAVASALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNAIGVAGAK 992

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  G   +A  L  N+ I  ++L+ N + + GA+ +++
Sbjct: 993  ALANALKVNSSLRRLNLQENSLGMDGMICIATALSGNHGIQHINLQGNHIGESGARMISE 1052

Query: 522  SFKV 525
            + K 
Sbjct: 1053 AIKT 1056



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 165/337 (48%), Gaps = 1/337 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G  F+AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 722  RTLASLSLQSNRIRDDGAKFMAEALAANRTLSVMHLQKNTIGPMGAQHMADALKQNRSLK 781

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N IGD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 782  ELMFSSNSIGDGGAKALAEALKVNQGLETLDLQSNSISDTGVAALMGALCANRALLSLNL 841

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G   LA AL  NST+++L L  N     GA A+A  +  N +L  LHL  N 
Sbjct: 842  RENSISPEGAQDLARALCTNSTLKNLDLTANLLHDQGAQAIAMAVRENHTLMSLHLQWNF 901

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L   K  L  LD+  N+I  +GA  VA  +K   +L  + L +  IG 
Sbjct: 902  IQAGAAKALGQALQFNK-SLISLDLQENAIGDEGACAVASALKANTALTALYLQVASIGA 960

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G DG  
Sbjct: 961  PGAQALGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGMI 1020

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  +  I  + L    IG SGA  +++ ++ N
Sbjct: 1021 CIATALSGNHGIQHINLQGNHIGESGARMISEAIKTN 1057



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 156/299 (52%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+   +  S  + GD G   LAE+L  NQ  E +   +N I+  G+ A  
Sbjct: 768  QHMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLETLDLQSNSISDTGVAALM 827

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            G L +N AL +LNL  N I  EG + L   L  N+ ++ L L++  L D+GA+AIA  ++
Sbjct: 828  GALCANRALLSLNLRENSISPEGAQDLARALCTNSTLKNLDLTANLLHDQGAQAIAMAVR 887

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N ++ SL L  N  G  GA A+A  L+ N +
Sbjct: 888  ENHTLMSLHLQWNFIQAGAAKALGQALQFNKSLISLDLQENAIGDEGACAVASALKANTA 947

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG  G +AL   L+  +  L +LD+  N+I   GA  +A  +K   SL  
Sbjct: 948  LTALYLQVASIGAPGAQALGEALAVNR-TLEILDLRGNAIGVAGAKALANALKVNSSLRR 1006

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +G   IA AL  N  I  I+L GN+I   GA  I+  +K N+   ++++
Sbjct: 1007 LNLQENSLGMDGMICIATALSGNHGIQHINLQGNHIGESGARMISEAIKTNAPSCTVEM 1065


>gi|355756510|gb|EHH60118.1| hypothetical protein EGM_11416, partial [Macaca fascicularis]
          Length = 1108

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 153/433 (35%), Positives = 231/433 (53%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 668  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 727

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 728  ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 787

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L VL L  N I   G   +A+AL +N +++ L L+ N  G  G+ ALA+ L+ 
Sbjct: 788  ALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKV 847

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +G   +A  +    +
Sbjct: 848  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGGQAIAHALCTNST 906

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 907  LKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 966

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 967  DLQENAIGDDGACAVAHALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 1026

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +   GA  +A AL  N    +  +NL  N
Sbjct: 1027 NAIGVSGAKALANALK-VNSSLRRLNLQENSLGMGGAICVATALSGNHR--LQHINLQGN 1083

Query: 569  FLTKFGQSALTDA 581
             +   G   +++A
Sbjct: 1084 HIGDSGARMISEA 1096



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 116/345 (33%), Positives = 170/345 (49%), Gaps = 1/345 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ + G    D+G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 765  RTLTSLSLQGNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLK 824

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L LS N IGD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 825  ELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSL 884

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G  ++A AL  NST+++L L  N     GA A+A  +  N++L  LHL  N 
Sbjct: 885  RENSISPEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNF 944

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L   +  L  LD+  N+I   GA  VA  +K   +L  + L +  IG 
Sbjct: 945  IQAGAAQALGQALQLNR-SLTSLDLQENAIGDDGACAVAHALKVNTALTALYLQVASIGA 1003

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G  GA 
Sbjct: 1004 PGAQVLGEALAVNRTLEILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGGAI 1063

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             ++  L  +  +  + L    IG SGA  +++ ++ N     +++
Sbjct: 1064 CVATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1108


>gi|410985304|ref|XP_003998963.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3 [Felis catus]
          Length = 1064

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 156/433 (36%), Positives = 231/433 (53%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            SK  L     +L    S+ +    F D  +  L   L G +   + +S A N I+  G K
Sbjct: 624  SKGVLQSLLPQLLYCRSLRLDSNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAK 683

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L  L+L GN IG +G K L D L  N  +  L L +  +RD GA+ +AE
Sbjct: 684  ALARSLLVNRSLTALDLRGNSIGPQGAKALADALKINRTLAFLSLQNNAIRDNGARFVAE 743

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N I   G    A+AL +N +++ L  + N  G  GA ALAK L+ 
Sbjct: 744  ALAANRTLSVLHLQKNTIGPLGAQQTADALKQNRSLKELIFSSNSIGDKGAEALAKALKV 803

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L  L++  NSIS++GA  +A+ + +  +
Sbjct: 804  NQGLESLDLQSNSISDAGVAALMGALCTNQ-TLISLNLRENSISSEGARDLAQALCSNST 862

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ +A A+++NR +T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 863  LKNLDLTANLLHDQGAQAVALAVRENRALTSLHLQWNFIQAGAAKALGQALQLNRSLTSL 922

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA AL+  LK +  +  L L    IGA GA+ + D L  N T+ ILDLR 
Sbjct: 923  DLQENAIGDEGASALASALKANTALTALYLQVASIGARGAQALGDALAVNRTLEILDLRG 982

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DG   +A AL  N   ++  +NL  N
Sbjct: 983  NAIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGVICVATALSGNH--SLQHINLQGN 1039

Query: 569  FLTKFGQSALTDA 581
             + + G   +++A
Sbjct: 1040 HIGESGARMISEA 1052



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 210/400 (52%), Gaps = 13/400 (3%)

Query: 137  NLLSGFTGKLFRES---KQTLNEFAKEL-------RAFSSVDMSGRNFGDEGLFFLAESL 186
            ++LSG   ++ R S    Q  N+ AK L       R+ +++D+ G + G +G   LA++L
Sbjct: 658  SVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTALDLRGNSIGPQGAKALADAL 717

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
              N+T   +S   N I   G +     L +N  L  L+L  N IG  G +   D L  N 
Sbjct: 718  KINRTLAFLSLQNNAIRDNGARFVAEALAANRTLSVLHLQKNTIGPLGAQQTADALKQNR 777

Query: 247  GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
             ++ L  SS  + D+GA+A+A+ LK N  L  L+L +N I  +G  +L  AL  N T+ S
Sbjct: 778  SLKELIFSSNSIGDKGAEALAKALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLIS 837

Query: 307  LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK-LAVLD 365
            L+L  N   + GA  LA+ L  N +L+ L L  N + D+G +A+   L+ R+ + L  L 
Sbjct: 838  LNLRENSISSEGARDLAQALCSNSTLKNLDLTANLLHDQGAQAV--ALAVRENRALTSLH 895

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +  N I A  A  + + ++  +SL  ++L  N IGDEGA  +A ALK N  +T + L   
Sbjct: 896  LQWNFIQAGAAKALGQALQLNRSLTSLDLQENAIGDEGASALASALKANTALTALYLQVA 955

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            +I ++GA A+   L  N  +  LDL  N IG  GAKAL+  LK + ++  L L    +G 
Sbjct: 956  SIGARGAQALGDALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM 1015

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
             G   VA  L  N+++  ++L+ N + + GA+ ++++ K 
Sbjct: 1016 DGVICVATALSGNHSLQHINLQGNHIGESGARMISEAIKT 1055



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/337 (33%), Positives = 166/337 (49%), Gaps = 1/337 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  + + +      D G  F+AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 721  RTLAFLSLQNNAIRDNGARFVAEALAANRTLSVLHLQKNTIGPLGAQQTADALKQNRSLK 780

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N IGD+G + L   L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 781  ELIFSSNSIGDKGAEALAKALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLISLNL 840

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G   LA+AL  NST+++L L  N     GA A+A  +  N++L  LHL  N 
Sbjct: 841  RENSISSEGARDLAQALCSNSTLKNLDLTANLLHDQGAQAVALAVRENRALTSLHLQWNF 900

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L   +  L  LD+  N+I  +GA  +A  +K   +L  + L +  IG 
Sbjct: 901  IQAGAAKALGQALQLNR-SLTSLDLQENAIGDEGASALASALKANTALTALYLQVASIGA 959

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + DAL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G DG  
Sbjct: 960  RGAQALGDALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGVI 1019

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  + ++  + L    IG SGA  +++ ++ N
Sbjct: 1020 CVATALSGNHSLQHINLQGNHIGESGARMISEAIKTN 1056



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 168/317 (52%), Gaps = 1/317 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  S + +     G  G    A++L  N++ +E+ F++N I   G +A    L+ N  L+
Sbjct: 749  RTLSVLHLQKNTIGPLGAQQTADALKQNRSLKELIFSSNSIGDKGAEALAKALKVNQGLE 808

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            +L+L  N I D GV  L   L  N  +  L L    +  EGA+ +A+ L +NS L+ L+L
Sbjct: 809  SLDLQSNSISDAGVAALMGALCTNQTLISLNLRENSISSEGARDLAQALCSNSTLKNLDL 868

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N++   G  ++A A+ EN  + SLHL  N+  A  A AL + L+ N+SL  L L  N+
Sbjct: 869  TANLLHDQGAQAVALAVRENRALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENA 928

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            IGDEG  AL S L +    L  L +   SI A+GA  + + +   ++L  ++L  N IG 
Sbjct: 929  IGDEGASALASALKANTA-LTALYLQVASIGARGAQALGDALAVNRTLEILDLRGNAIGV 987

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ +A+ALK N ++  ++L  N++   G   +A  L  N  +  ++L  N IG  GA+
Sbjct: 988  AGAKALANALKVNSSLRRLNLQENSLGMDGVICVATALSGNHSLQHINLQGNHIGESGAR 1047

Query: 462  ALSEVLKFHGNINTLKL 478
             +SE +K +    T+++
Sbjct: 1048 MISEAIKTNAPSCTVEM 1064



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 144/281 (51%), Gaps = 5/281 (1%)

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           RSL L+ N         L   L G    ++ + L  N I ++G +AL   L   +  L  
Sbjct: 639 RSLRLDSNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNR-SLTA 697

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  NSI  +GA  +A+ +K  ++L +++L  N I D GA  +A+AL  NRT++ + L 
Sbjct: 698 LDLRGNSIGPQGAKALADALKINRTLAFLSLQNNAIRDNGARFVAEALAANRTLSVLHLQ 757

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I   GA   A  LK N  +  L  + N IG  GA+AL++ LK +  + +L L    I
Sbjct: 758 KNTIGPLGAQQTADALKQNRSLKELIFSSNSIGDKGAEALAKALKVNQGLESLDLQSNSI 817

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             +G   +   L  N T+  L+LR N +  EGA+ LAQ+    N  L ++DL  N + D 
Sbjct: 818 SDAGVAALMGALCTNQTLISLNLRENSISSEGARDLAQAL-CSNSTLKNLDLTANLLHDQ 876

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           GA A+A A++ N   A+TSL+L  NF+      AL  A  L
Sbjct: 877 GAQAVALAVRENR--ALTSLHLQWNFIQAGAAKALGQALQL 915


>gi|355709913|gb|EHH31377.1| hypothetical protein EGK_12437, partial [Macaca mulatta]
          Length = 1100

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 153/433 (35%), Positives = 231/433 (53%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 660  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 719

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 720  ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 779

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L VL L  N I   G   +A+AL +N +++ L L+ N  G  G+ ALA+ L+ 
Sbjct: 780  ALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKV 839

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +G   +A  +    +
Sbjct: 840  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGGQAIAHALCTNST 898

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 899  LKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 958

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 959  DLQENAIGDDGACAVAHALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 1018

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +   GA  +A AL  N    +  +NL  N
Sbjct: 1019 NAIGVSGAKALANALK-VNSSLRRLNLQENSLGMGGAICVATALSGNHR--LQHINLQGN 1075

Query: 569  FLTKFGQSALTDA 581
             +   G   +++A
Sbjct: 1076 HIGDSGARMISEA 1088



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/345 (33%), Positives = 170/345 (49%), Gaps = 1/345 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ + G    D+G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 757  RTLTSLSLQGNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLK 816

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L LS N IGD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 817  ELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSL 876

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G  ++A AL  NST+++L L  N     GA A+A  +  N++L  LHL  N 
Sbjct: 877  RENSISPEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNF 936

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L   +  L  LD+  N+I   GA  VA  +K   +L  + L +  IG 
Sbjct: 937  IQAGAAQALGQALQLNR-SLTSLDLQENAIGDDGACAVAHALKVNTALTALYLQVASIGA 995

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G  GA 
Sbjct: 996  PGAQVLGEALAVNRTLEILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGGAI 1055

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             ++  L  +  +  + L    IG SGA  +++ ++ N     +++
Sbjct: 1056 CVATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1100


>gi|18676566|dbj|BAB84935.1| FLJ00180 protein [Homo sapiens]
          Length = 499

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 156/433 (36%), Positives = 232/433 (53%), Gaps = 5/433 (1%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
           S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 59  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 118

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 119 ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 178

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L +N  L +L L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 179 ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKV 238

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  +    +
Sbjct: 239 NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALCANST 297

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 298 LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 357

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           DL  N IG DGA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR 
Sbjct: 358 DLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRG 417

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           N +   GAK LA + K VN +L  ++L  N +  DGA  IA AL  N    +  +NL  N
Sbjct: 418 NAIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAICIATALSGNHR--LQHINLQGN 474

Query: 569 FLTKFGQSALTDA 581
            +   G   +++A
Sbjct: 475 HIGDSGARMISEA 487



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 189/364 (51%), Gaps = 1/364 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ +S+D+ G + G +G   LA++L  N+T   +S   N +   G ++    L SN  L 
Sbjct: 128 RSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 187

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L  N IG  G + + D L  N  ++ L  SS  + D GAKA+AE LK N  L  L+L
Sbjct: 188 MLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDL 247

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I  +G  +L  AL  N T+ SL L  N     GA A+A  L  N +L+ L L  N 
Sbjct: 248 QSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANL 307

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D+G RA+   +   +  L  L +  N I A  A  + + ++  +SL  ++L  N IGD
Sbjct: 308 LHDQGARAIAVAVRENR-TLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGD 366

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +GA  +A ALK N  +T + L   +I + GA  +   L  N  +  LDL  N IG  GAK
Sbjct: 367 DGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAK 426

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           AL+  LK + ++  L L    +G  GA  +A  L  N+ +  ++L+ N + D GA+ +++
Sbjct: 427 ALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISE 486

Query: 522 SFKV 525
           + K 
Sbjct: 487 AIKT 490



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 67/141 (47%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ +S+D+     GD+G   +A +L  N     +      I A+G +     L  N  L+
Sbjct: 352 RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLE 411

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L GN IG  G K L + L  N+ + RL L    L  +GA  IA  L  N  L+ + L
Sbjct: 412 ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 471

Query: 282 NNNMIDYSGFTSLAEALLENS 302
             N I  SG   ++EA+  N+
Sbjct: 472 QGNHIGDSGARMISEAIKTNA 492



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A +++ +   + G  G   L E+L  N+T E +    N I  AG KA    L+ N +L+ 
Sbjct: 381 ALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRR 440

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           LNL  N +G +G  C+   L  N  ++ + L    + D GA+ I+E +K N+    +E+
Sbjct: 441 LNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 499


>gi|301605721|ref|XP_002932504.1| PREDICTED: protein NLRC3 [Xenopus (Silurana) tropicalis]
          Length = 1071

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 227/422 (53%), Gaps = 5/422 (1%)

Query: 160  ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNI 218
            +L+  +++ M    F D  +  LA  L     A + +S A N ++  G+KA    L  N 
Sbjct: 641  QLQYCTNLRMENNGFQDVVMELLASILRAKDCAIQRISLAENRLSNRGVKALGRALMVNR 700

Query: 219  ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             L  L+L  N IG  G   L ++L  N  +  L L +  ++ EGA+ +A+ L  N  LR 
Sbjct: 701  TLAVLDLHSNNIGPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRA 760

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L +  N I   G  SL+ +L +N  ++ L L+GN  G  GA ALA+ L+ N  L  L L 
Sbjct: 761  LNIQKNNIGAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTLDLQ 820

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             NSI D G+  L SGLS  +  L  L++  NSI  +GA  +AE ++   +LL ++L  N 
Sbjct: 821  SNSISDRGLSLLTSGLSQNR-SLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTANL 879

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            + DEG E +A AL++N+++ ++ L  N +    A  +A  L+ N  +  LDL  N +G +
Sbjct: 880  LHDEGMEALARALRENQSLESLHLQWNFLRVASARYLAAALRVNKALRCLDLQENALGDE 939

Query: 459  GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
            GA ALS+ LK +  ++ L L    IGASG + +A+ L  N ++  LDLR N +   GAK 
Sbjct: 940  GAAALSDALKENNTLSALYLQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAKA 999

Query: 519  LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
            LA + K +N  L S++L  N I  DGA  +A A+  N   ++TSL+L  N + + G   +
Sbjct: 1000 LAGALK-INNTLQSLNLQENSIVLDGAICLANAVSGNS--SLTSLSLQGNHIGQSGAKVI 1056

Query: 579  TD 580
            +D
Sbjct: 1057 SD 1058



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/363 (34%), Positives = 191/363 (52%), Gaps = 1/363 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  + +D+   N G  G   LAE L  NQ    ++   N I + G +     L +N  L+
Sbjct: 700  RTLAVLDLHSNNIGPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLR 759

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             LN+  N IG EGV+ L   L  N  ++ L LS   + D GA A+AE LK+NS L  L+L
Sbjct: 760  ALNIQKNNIGAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTLDL 819

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I   G + L   L +N +++ L+L  N  G  GA ALA+ L  N +L  L L  N 
Sbjct: 820  QSNSISDRGLSLLTSGLSQNRSLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTANL 879

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + DEG+ AL   L   +  L  L +  N +    A ++A  ++  K+L  ++L  N +GD
Sbjct: 880  LHDEGMEALARALRENQ-SLESLHLQWNFLRVASARYLAAALRVNKALRCLDLQENALGD 938

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EGA  ++DALK+N T++ + L G  I + G  ++A  L  N  + +LDL  N IG  GAK
Sbjct: 939  EGAAALSDALKENNTLSALYLQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAK 998

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK +  + +L L    I   GA  +A+ +  N++++ L L+ N +   GAK ++ 
Sbjct: 999  ALAGALKINNTLQSLNLQENSIVLDGAICLANAVSGNSSLTSLSLQGNHIGQSGAKVISD 1058

Query: 522  SFK 524
            + K
Sbjct: 1059 TIK 1061



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 177/343 (51%), Gaps = 1/343 (0%)

Query: 154  LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            L E  +  +   S+++       EG  FLA+SL  N+    ++   N I A G+++  G 
Sbjct: 720  LAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRALNIQKNNIGAEGVESLSGS 779

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            L+ N  L+ L LSGN +GD G   L + L  N+ +  L L S  + D G   +   L  N
Sbjct: 780  LKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTLDLQSNSISDRGLSLLTSGLSQN 839

Query: 274  SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
              L+ L L  N I   G  +LAE+L  NST+  L L  N     G  ALA+ L  N+SL 
Sbjct: 840  RSLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTANLLHDEGMEALARALRENQSLE 899

Query: 334  ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
             LHL  N +     R L + L   K  L  LD+  N++  +GA  +++ +K   +L  + 
Sbjct: 900  SLHLQWNFLRVASARYLAAALRVNKA-LRCLDLQENALGDEGAAALSDALKENNTLSALY 958

Query: 394  LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
            L    IG  G + +A+AL  NR++ T+DL GNNI  +GA A+A  LK N+ + SL+L  N
Sbjct: 959  LQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAKALAGALKINNTLQSLNLQEN 1018

Query: 454  PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             I  DGA  L+  +  + ++ +L L    IG SGA+ ++D ++
Sbjct: 1019 SIVLDGAICLANAVSGNSSLTSLSLQGNHIGQSGAKVISDTIK 1061



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 142/287 (49%), Gaps = 31/287 (10%)

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N    L  N + + L   +    L +  N   D  +  L S L ++   +  + +  N +
Sbjct: 625 NLSQCLSFNLVQRLLPQLQYCTNLRMENNGFQDVVMELLASILRAKDCAIQRISLAENRL 684

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           S +G   +   +   ++L  ++L+ N+IG  GA  +A+ L+ N+ + +++L  N I S+G
Sbjct: 685 SNRGVKALGRALMVNRTLAVLDLHSNNIGPSGAMALAEVLRSNQVLLSLNLQNNQIKSEG 744

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A  +A+ L  N  + +L++  N IGA+G ++LS  LK +  +  L L    +G  GA  +
Sbjct: 745 AQFLAQSLLANRKLRALNIQKNNIGAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAAL 804

Query: 492 ADMLRYNNTISILDLRANGLRD----------------------------EGAKCLAQSF 523
           A+ L+ N+ +S LDL++N + D                            EGA+ LA+S 
Sbjct: 805 AEALKSNSKLSTLDLQSNSISDRGLSLLTSGLSQNRSLKHLNLRENSIGIEGAQALAESL 864

Query: 524 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           +  N  L  +DL  N + D+G  A+A+AL+ N+  ++ SL+L  NFL
Sbjct: 865 R-RNSTLLHLDLTANLLHDEGMEALARALRENQ--SLESLHLQWNFL 908



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 92/203 (45%), Gaps = 28/203 (13%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L E  +       +D++     DEG+  LA +L  NQ+ E +    N +  A  +
Sbjct: 855  EGAQALAESLRRNSTLLHLDLTANLLHDEGMEALARALRENQSLESLHLQWNFLRVASAR 914

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN---------------AGVERL-- 251
                 L+ N AL+ L+L  N +GDEG   L D L +N               +G + L  
Sbjct: 915  YLAAALRVNKALRCLDLQENALGDEGAAALSDALKENNTLSALYLQGTMIGASGTQSLAN 974

Query: 252  ------QLSSVDLRD-----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
                   L ++DLR       GAKA+A  LK N+ L+ L L  N I   G   LA A+  
Sbjct: 975  ALAVNRSLKTLDLRGNNIGLRGAKALAGALKINNTLQSLNLQENSIVLDGAICLANAVSG 1034

Query: 301  NSTIRSLHLNGNYGGALGANALA 323
            NS++ SL L GN+ G  GA  ++
Sbjct: 1035 NSSLTSLSLQGNHIGQSGAKVIS 1057



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E    L++  KE    S++ + G   G  G   LA +L  N++ + +    N I   G K
Sbjct: 939  EGAAALSDALKENNTLSALYLQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAK 998

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A  G L+ N  L++LNL  N I  +G  CL + +  N+ +  L L    +   GAK I++
Sbjct: 999  ALAGALKINNTLQSLNLQENSIVLDGAICLANAVSGNSSLTSLSLQGNHIGQSGAKVISD 1058

Query: 269  LLKNNS 274
             +KN++
Sbjct: 1059 TIKNSA 1064


>gi|383411373|gb|AFH28900.1| protein NLRC3 [Macaca mulatta]
 gi|383411375|gb|AFH28901.1| protein NLRC3 [Macaca mulatta]
          Length = 1065

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 152/433 (35%), Positives = 231/433 (53%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G K L D L  N  +  L L    +RD+GA+++AE
Sbjct: 685  ALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAE 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  L +L L  N I   G   +A+AL +N +++ L L+ N  G  G+ ALA+ L+ 
Sbjct: 745  ALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKV 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +G   +A  +    +
Sbjct: 805  NQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGGQAIAHALCTNST 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 864  LKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 924  DLQENAIGDDGACAVAHALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 983

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +   GA  +A AL  N    +  +NL  N
Sbjct: 984  NAIGVSGAKALANALK-VNSSLRRLNLQENSLGMGGAICVATALSGNHR--LQHINLQGN 1040

Query: 569  FLTKFGQSALTDA 581
             +   G   +++A
Sbjct: 1041 HIGDSGARMISEA 1053



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 116/345 (33%), Positives = 170/345 (49%), Gaps = 1/345 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ + G    D+G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 722  RTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLK 781

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L LS N IGD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 782  ELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSL 841

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G  ++A AL  NST+++L L  N     GA A+A  +  N++L  LHL  N 
Sbjct: 842  RENSISPEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNF 901

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L   +  L  LD+  N+I   GA  VA  +K   +L  + L +  IG 
Sbjct: 902  IQAGAAQALGQALQLNR-SLTSLDLQENAIGDDGACAVAHALKVNTALTALYLQVASIGA 960

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G  GA 
Sbjct: 961  PGAQVLGEALAVNRTLEILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGGAI 1020

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             ++  L  +  +  + L    IG SGA  +++ ++ N     +++
Sbjct: 1021 CVATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1065


>gi|222137288|gb|ACM45226.1| NLRC3 receptor [Ictalurus punctatus]
          Length = 800

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 150/430 (34%), Positives = 233/430 (54%), Gaps = 5/430 (1%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
           +L +   +L   S + M    F D+ +  L   L    +  + +S A + I++ GIK   
Sbjct: 363 SLKQLLPQLLYCSKLRMENNKFKDDAMELLGSLLSAKDSHIQSLSMADSSISSKGIKPLS 422

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  N  L TL+L GN IG +G K L D L  N  +  + L S  + DEGA A+AE+L+
Sbjct: 423 RALLVNRTLTTLDLHGNNIGTKGAKTLADALKMNQVIVSVNLQSNQIGDEGAHALAEVLQ 482

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           +N  L  L +  N I   G   +AEAL +N  ++ L+++GN+ G +GA ALA+ L  N +
Sbjct: 483 SNRKLSTLNVKKNSIGPEGVKKIAEALKKNQILQDLNVSGNHLGDIGALALAQALAVNHT 542

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L+ L L  NS+ D G++AL   L   KG L  L++  NSI  +GA  +   ++   +L  
Sbjct: 543 LQTLSLRSNSVSDRGMKALTQALCYNKG-LTKLNLRENSIGVEGARAIGRALQENHTLRE 601

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N + DEG + IA A+K NR +T++ L  N + +  A A+A+ L+ N+ I  LDL 
Sbjct: 602 LDLTANLLNDEGVKAIAAAVKVNRALTSLHLQWNFMKAGAAKALAQSLQSNTFIQLLDLQ 661

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +G DG  +L+  LK + ++  L L     G +GA  +A+ L  N ++  LDLR N +
Sbjct: 662 ENALGDDGVVSLAGALKVNSSLMVLYLQGVSAGEAGAVALAEALTVNQSLHTLDLRGNSI 721

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
              GAK L+ + K  N +L S++L  N +  DGA  IA AL+ N    +T +NL  N + 
Sbjct: 722 GMGGAKALSSALK-TNRSLRSLNLQENSLGMDGAIFIATALRGNHQ--LTYINLQGNGIG 778

Query: 572 KFGQSALTDA 581
           + G   ++DA
Sbjct: 779 ESGAKVVSDA 788



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/363 (34%), Positives = 199/363 (54%), Gaps = 1/363 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  +++D+ G N G +G   LA++L  NQ    V+  +N I   G  A   VLQSN  L 
Sbjct: 429 RTLTTLDLHGNNIGTKGAKTLADALKMNQVIVSVNLQSNQIGDEGAHALAEVLQSNRKLS 488

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TLN+  N IG EGVK + + L  N  ++ L +S   L D GA A+A+ L  N  L+ L L
Sbjct: 489 TLNVKKNSIGPEGVKKIAEALKKNQILQDLNVSGNHLGDIGALALAQALAVNHTLQTLSL 548

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N +   G  +L +AL  N  +  L+L  N  G  GA A+ + L+ N +LREL L  N 
Sbjct: 549 RSNSVSDRGMKALTQALCYNKGLTKLNLRENSIGVEGARAIGRALQENHTLRELDLTANL 608

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DEG++A+ + +   +  L  L +  N + A  A  +A+ +++   +  ++L  N +GD
Sbjct: 609 LNDEGVKAIAAAVKVNRA-LTSLHLQWNFMKAGAAKALAQSLQSNTFIQLLDLQENALGD 667

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +G   +A ALK N ++  + L G +    GA A+A  L  N  + +LDL  N IG  GAK
Sbjct: 668 DGVVSLAGALKVNSSLMVLYLQGVSAGEAGAVALAEALTVNQSLHTLDLRGNSIGMGGAK 727

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           ALS  LK + ++ +L L    +G  GA F+A  LR N+ ++ ++L+ NG+ + GAK ++ 
Sbjct: 728 ALSSALKTNRSLRSLNLQENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSD 787

Query: 522 SFK 524
           + +
Sbjct: 788 AIR 790



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 179/355 (50%), Gaps = 1/355 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +TL +  K  +   SV++     GDEG   LAE L  N+    ++   N I   G+K   
Sbjct: 447 KTLADALKMNQVIVSVNLQSNQIGDEGAHALAEVLQSNRKLSTLNVKKNSIGPEGVKKIA 506

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L+ LN+SGN +GD G   L   L  N  ++ L L S  + D G KA+ + L 
Sbjct: 507 EALKKNQILQDLNVSGNHLGDIGALALAQALAVNHTLQTLSLRSNSVSDRGMKALTQALC 566

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L  N I   G  ++  AL EN T+R L L  N     G  A+A  ++ N++
Sbjct: 567 YNKGLTKLNLRENSIGVEGARAIGRALQENHTLRELDLTANLLNDEGVKAIAAAVKVNRA 626

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  LHL  N +     +AL   L S    + +LD+  N++   G   +A  +K   SL+ 
Sbjct: 627 LTSLHLQWNFMKAGAAKALAQSLQSNTF-IQLLDLQENALGDDGVVSLAGALKVNSSLMV 685

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L     G+ GA  +A+AL  N+++ T+DL GN+I   GA A++  LK N  + SL+L 
Sbjct: 686 LYLQGVSAGEAGAVALAEALTVNQSLHTLDLRGNSIGMGGAKALSSALKTNRSLRSLNLQ 745

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            N +G DGA  ++  L+ +  +  + L    IG SGA+ V+D +R +    ++D+
Sbjct: 746 ENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSDAIRSDAPECVVDI 800


>gi|320170518|gb|EFW47417.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 623

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 159/430 (36%), Positives = 226/430 (52%), Gaps = 10/430 (2%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +  R   D     LAE+L  N    ++S   N I  AG  A    L+ N  L  L+L  N
Sbjct: 22  LEAREIDDHDTLGLAEALQVNTKRADLSLGQNQIGCAGAGAIAEALKVNTTLVRLSLDDN 81

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + + L  N G+E L L+   +   G +AIAE LK N  L  L+L++N +  
Sbjct: 82  QIGDAGAQAIAEALKVNTGLETLDLNWNRIGAAGTQAIAEALKVNKTLTNLDLSDNQMGD 141

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++AE L  N+T+ +L+L  N  G  G   +A+ L+ N  L +L L  N IGD G +
Sbjct: 142 VGAQAIAEGLKVNTTLDTLNLASNTIGEAG--VIAEALKVNTRLTQLRLGENRIGDAGAQ 199

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+   L      L  L +G+N I   GA  +AE +K   +L  + L  N IGD GA+ IA
Sbjct: 200 AIAEALKVNP-TLRELMLGSNRIGDAGAQAIAEALKVNPTLRELVLGSNRIGDAGAQAIA 258

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +ALK N T+  + LG N I   GA AIA VLK N+ +T L L  N IG  GA+A++E+LK
Sbjct: 259 EALKVNPTLRELVLGSNRIGDAGAQAIAEVLKPNTAMTWLGLGGNQIGPLGAQAIAEMLK 318

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
            +  +  L +   + G  GA  +A+  + N T++ LDLR N L D GA  +A + K VN 
Sbjct: 319 VNKTMKNLYVAGNRFGGDGALAIAEAFKVNTTMTTLDLRDNQLGDAGAMSIAGTLK-VNT 377

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA----KDL 584
            +T + L  N+I   GA  IA ALK N    +TSL L  N +T+ G   +  A    K L
Sbjct: 378 TVTGVYLCDNQIGSAGAREIALALKVN--TTLTSLGLRANQITETGAQEIAKALRVNKKL 435

Query: 585 VYEMSEKEVN 594
            Y  ++ ++N
Sbjct: 436 KYLENDLQMN 445



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 160/425 (37%), Positives = 229/425 (53%), Gaps = 8/425 (1%)

Query: 168 DMS-GRN-FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           D+S G+N  G  G   +AE+L  N T   +S   N I  AG +A    L+ N  L+TL+L
Sbjct: 47  DLSLGQNQIGCAGAGAIAEALKVNTTLVRLSLDDNQIGDAGAQAIAEALKVNTGLETLDL 106

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           + N IG  G + + + L  N  +  L LS   + D GA+AIAE LK N+ L  L L +N 
Sbjct: 107 NWNRIGAAGTQAIAEALKVNKTLTNLDLSDNQMGDVGAQAIAEGLKVNTTLDTLNLASNT 166

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I  +G   +AEAL  N+ +  L L  N  G  GA A+A+ L+ N +LREL L  N IGD 
Sbjct: 167 IGEAGV--IAEALKVNTRLTQLRLGENRIGDAGAQAIAEALKVNPTLRELMLGSNRIGDA 224

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G +A+   L      L  L +G+N I   GA  +AE +K   +L  + L  N IGD GA+
Sbjct: 225 GAQAIAEALKVNP-TLRELVLGSNRIGDAGAQAIAEALKVNPTLRELVLGSNRIGDAGAQ 283

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA+ LK N  +T + LGGN I   GA AIA +LK N  + +L +A N  G DGA A++E
Sbjct: 284 AIAEVLKPNTAMTWLGLGGNQIGPLGAQAIAEMLKVNKTMKNLYVAGNRFGGDGALAIAE 343

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
             K +  + TL L   Q+G +GA  +A  L+ N T++ + L  N +   GA+ +A + K 
Sbjct: 344 AFKVNTTMTTLDLRDNQLGDAGAMSIAGTLKVNTTVTGVYLCDNQIGSAGAREIALALK- 402

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN--FLTKFGQSALTDAKD 583
           VN  LTS+ L  N+I + GA  IA+AL+ N+ +     +L  N    + F + A  D   
Sbjct: 403 VNTTLTSLGLRANQITETGAQEIAKALRVNKKLKYLENDLQMNPRVFSMFPRLATADEVQ 462

Query: 584 LVYEM 588
            V+ +
Sbjct: 463 AVFRL 467



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 131/362 (36%), Positives = 186/362 (51%), Gaps = 37/362 (10%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  +  +++D+S    GD G   +AE L  N T                    
Sbjct: 117 QAIAEALKVNKTLTNLDLSDNQMGDVGAQAIAEGLKVNTT-------------------- 156

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
                   L TLNL+ N IG+ GV  + + L  N  + +L+L    + D GA+AIAE LK
Sbjct: 157 --------LDTLNLASNTIGEAGV--IAEALKVNTRLTQLRLGENRIGDAGAQAIAEALK 206

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  LR L L +N I  +G  ++AEAL  N T+R L L  N  G  GA A+A+ L+ N +
Sbjct: 207 VNPTLRELMLGSNRIGDAGAQAIAEALKVNPTLRELVLGSNRIGDAGAQAIAEALKVNPT 266

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           LREL L  N IGD G +A+   L      +  L +G N I   GA  +AE +K  K++  
Sbjct: 267 LRELVLGSNRIGDAGAQAIAEVLKPNTA-MTWLGLGGNQIGPLGAQAIAEMLKVNKTMK- 324

Query: 392 INLYM--NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
            NLY+  N  G +GA  IA+A K N T+TT+DL  N +   GA +IA  LK N+ +T + 
Sbjct: 325 -NLYVAGNRFGGDGALAIAEAFKVNTTMTTLDLRDNQLGDAGAMSIAGTLKVNTTVTGVY 383

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL--DLR 507
           L  N IG+ GA+ ++  LK +  + +L L   QI  +GA+ +A  LR N  +  L  DL+
Sbjct: 384 LCDNQIGSAGAREIALALKVNTTLTSLGLRANQITETGAQEIAKALRVNKKLKYLENDLQ 443

Query: 508 AN 509
            N
Sbjct: 444 MN 445


>gi|311251627|ref|XP_003124699.1| PREDICTED: protein NLRC3 [Sus scrofa]
          Length = 1066

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 154/433 (35%), Positives = 232/433 (53%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
            S   L     +L    S+ +    F D  +  L   L  N      +S A N I+  G K
Sbjct: 626  SPGVLQSLLPQLLYCQSLRLDANQFQDPVMELLGSVLSGNDCRIRRISLAENQISNKGAK 685

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  +RD+GA+A+AE
Sbjct: 686  ALARSLLVNRSLTTLDLHSNSIGPQGAKALADALKINRTLAFLSLQSNAIRDDGARALAE 745

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L +N +   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ 
Sbjct: 746  ALAANRTLSVLHLQSNAVGPVGTQWIADALKQNRSLKELIFSSNSIGDGGAKALAEALKV 805

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L+ L L  NSI D G+ ALM+ L + +  L+ L++  NSIS  GA  +A  +    +
Sbjct: 806  NQGLKSLDLQSNSISDTGVAALMAALCTNQTLLS-LNLRENSISPDGAQDLARALCTNST 864

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+++NR +T++ L  N I +  A A+ + L+ N+ +TSL
Sbjct: 865  LKSLDLTANLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNTSLTSL 924

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 925  DLQENAIGDEGASAVAIALKANTTLTALYLQVASIGAPGAQALGEALAVNRTLEILDLRG 984

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  +A AL  N    +  ++L  N
Sbjct: 985  NAIGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAICVATALSGNH--GLQHISLQGN 1041

Query: 569  FLTKFGQSALTDA 581
             + + G   +++A
Sbjct: 1042 HIGESGARMISEA 1054



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 133/399 (33%), Positives = 206/399 (51%), Gaps = 11/399 (2%)

Query: 137  NLLSGFTGKLFRES---KQTLNEFAKEL-------RAFSSVDMSGRNFGDEGLFFLAESL 186
            ++LSG   ++ R S    Q  N+ AK L       R+ +++D+   + G +G   LA++L
Sbjct: 660  SVLSGNDCRIRRISLAENQISNKGAKALARSLLVNRSLTTLDLHSNSIGPQGAKALADAL 719

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
              N+T   +S  +N I   G +A    L +N  L  L+L  N +G  G + + D L  N 
Sbjct: 720  KINRTLAFLSLQSNAIRDDGARALAEALAANRTLSVLHLQSNAVGPVGTQWIADALKQNR 779

Query: 247  GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
             ++ L  SS  + D GAKA+AE LK N  L+ L+L +N I  +G  +L  AL  N T+ S
Sbjct: 780  SLKELIFSSNSIGDGGAKALAEALKVNQGLKSLDLQSNSISDTGVAALMAALCTNQTLLS 839

Query: 307  LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
            L+L  N     GA  LA+ L  N +L+ L L  N + D+G +A+   +   +  L  L +
Sbjct: 840  LNLRENSISPDGAQDLARALCTNSTLKSLDLTANLLHDQGAQAIAVAVRENRA-LTSLHL 898

Query: 367  GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
              N I A  A  + + ++   SL  ++L  N IGDEGA  +A ALK N T+T + L   +
Sbjct: 899  QWNFIQAGAAKALGQALQLNTSLTSLDLQENAIGDEGASAVAIALKANTTLTALYLQVAS 958

Query: 427  IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
            I + GA A+   L  N  +  LDL  N IG  GAKAL+  LK + ++  L L    +G  
Sbjct: 959  IGAPGAQALGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMD 1018

Query: 487  GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            GA  VA  L  N+ +  + L+ N + + GA+ ++++ K 
Sbjct: 1019 GAICVATALSGNHGLQHISLQGNHIGESGARMISEAIKT 1057



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/337 (34%), Positives = 165/337 (48%), Gaps = 1/337 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  + + +      D+G   LAE+L  N+T   +   +N +   G +     L+ N +LK
Sbjct: 723  RTLAFLSLQSNAIRDDGARALAEALAANRTLSVLHLQSNAVGPVGTQWIADALKQNRSLK 782

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N IGD G K L + L  N G++ L L S  + D G  A+   L  N  L  L L
Sbjct: 783  ELIFSSNSIGDGGAKALAEALKVNQGLKSLDLQSNSISDTGVAALMAALCTNQTLLSLNL 842

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G   LA AL  NST++SL L  N     GA A+A  +  N++L  LHL  N 
Sbjct: 843  RENSISPDGAQDLARALCTNSTLKSLDLTANLLHDQGAQAIAVAVRENRALTSLHLQWNF 902

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L      L  LD+  N+I  +GA  VA  +K   +L  + L +  IG 
Sbjct: 903  IQAGAAKALGQALQLNT-SLTSLDLQENAIGDEGASAVAIALKANTTLTALYLQVASIGA 961

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 962  PGAQALGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAI 1021

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  +  +  + L    IG SGA  +++ ++ N
Sbjct: 1022 CVATALSGNHGLQHISLQGNHIGESGARMISEAIKTN 1058



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 147/281 (52%), Gaps = 5/281 (1%)

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           +SL L+ N         L   L GN   +R + L  N I ++G +AL   L   +  L  
Sbjct: 641 QSLRLDANQFQDPVMELLGSVLSGNDCRIRRISLAENQISNKGAKALARSLLVNR-SLTT 699

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+ +NSI  +GA  +A+ +K  ++L +++L  N I D+GA  +A+AL  NRT++ + L 
Sbjct: 700 LDLHSNSIGPQGAKALADALKINRTLAFLSLQSNAIRDDGARALAEALAANRTLSVLHLQ 759

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N +   G   IA  LK N  +  L  + N IG  GAKAL+E LK +  + +L L    I
Sbjct: 760 SNAVGPVGTQWIADALKQNRSLKELIFSSNSIGDGGAKALAEALKVNQGLKSLDLQSNSI 819

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             +G   +   L  N T+  L+LR N +  +GA+ LA++    N  L S+DL  N + D 
Sbjct: 820 SDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARAL-CTNSTLKSLDLTANLLHDQ 878

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           GA AIA A++ N   A+TSL+L  NF+      AL  A  L
Sbjct: 879 GAQAIAVAVRENR--ALTSLHLQWNFIQAGAAKALGQALQL 917


>gi|126335269|ref|XP_001370217.1| PREDICTED: protein NLRC3 [Monodelphis domestica]
          Length = 1093

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 146/401 (36%), Positives = 220/401 (54%), Gaps = 9/401 (2%)

Query: 193  EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
            +++S A N I   G K+    L  N +L  L+L  N IG +G K L D L  N  +  L 
Sbjct: 697  QKISLAENQIHNKGTKSLARSLLVNRSLTVLDLRSNSIGPQGAKALADSLKINRVLVSLS 756

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L +  ++D+GAK +A+ L  N  L VL+L  N I   G  S+A+AL +N +++ L  + N
Sbjct: 757  LQNNAIKDDGAKFVADALMVNHKLSVLQLQKNTIGPLGAKSIADALKKNGSLKELIFSSN 816

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
              G  G+ ALA+ L+ N+SL  L L  NSI D G+ AL   L S +  L+ L++  NSIS
Sbjct: 817  SVGNDGSKALAEALKVNQSLITLDLQSNSISDAGVTALTHALRSNQTLLS-LNLRENSIS 875

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             +GA  +A  + + + L  ++L  N + DEGA+ IA A+K+NR + ++ L  N I +  A
Sbjct: 876  PEGARDIASALCSNRVLQNLDLTANLLQDEGAQAIALAVKENRALKSLHLQWNFIQANAA 935

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
             A+ + L+ N  +T LDL  N IG +G  ALS  LK + ++  L L    IG  GA+ + 
Sbjct: 936  KALGQALQSNRSLTILDLQENAIGDEGMMALSRALKINTSLTALYLQVASIGVLGAQALG 995

Query: 493  DMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
            D L  N T+ ILDLR N +  +GAK +A + K +N +L  ++L  N +  DGA  IA AL
Sbjct: 996  DALAVNRTLEILDLRGNSIGADGAKAMANALK-INPSLQMLNLQENSLGMDGAICIATAL 1054

Query: 553  KANEDVAVTSLNLANNFLTKFGQSAL-----TDAKDLVYEM 588
              N    +  +NL  N + + G   +     T+A + + EM
Sbjct: 1055 SGNH--GLQHVNLQGNHIGESGARMISEAIKTNAPNCIVEM 1093



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 196/394 (49%), Gaps = 30/394 (7%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ + +D+   + G +G   LA+SL  N+    +S   N I   G K     L  N  L 
Sbjct: 722  RSLTVLDLRSNSIGPQGAKALADSLKINRVLVSLSLQNNAIKDDGAKFVADALMVNHKLS 781

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L L  N IG  G K + D L  N  ++ L  SS  + ++G+KA+AE LK N  L  L+L
Sbjct: 782  VLQLQKNTIGPLGAKSIADALKKNGSLKELIFSSNSVGNDGSKALAEALKVNQSLITLDL 841

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G T+L  AL  N T+ SL+L  N     GA  +A  L  N+ L+ L L  N 
Sbjct: 842  QSNSISDAGVTALTHALRSNQTLLSLNLRENSISPEGARDIASALCSNRVLQNLDLTANL 901

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + DEG +A                             +A  +K  ++L  ++L  N I  
Sbjct: 902  LQDEGAQA-----------------------------IALAVKENRALKSLHLQWNFIQA 932

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
              A+ +  AL+ NR++T +DL  N I  +G  A++R LK N+ +T+L L    IG  GA+
Sbjct: 933  NAAKALGQALQSNRSLTILDLQENAIGDEGMMALSRALKINTSLTALYLQVASIGVLGAQ 992

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL + L  +  +  L L    IGA GA+ +A+ L+ N ++ +L+L+ N L  +GA C+A 
Sbjct: 993  ALGDALAVNRTLEILDLRGNSIGADGAKAMANALKINPSLQMLNLQENSLGMDGAICIAT 1052

Query: 522  SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            +    N  L  ++L  N I + GA  I++A+K N
Sbjct: 1053 ALS-GNHGLQHVNLQGNHIGESGARMISEAIKTN 1085



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 172/345 (49%), Gaps = 1/345 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R   S+ +      D+G  F+A++L  N     +    N I   G K+    L+ N +LK
Sbjct: 750  RVLVSLSLQNNAIKDDGAKFVADALMVNHKLSVLQLQKNTIGPLGAKSIADALKKNGSLK 809

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N +G++G K L + L  N  +  L L S  + D G  A+   L++N  L  L L
Sbjct: 810  ELIFSSNSVGNDGSKALAEALKVNQSLITLDLQSNSISDAGVTALTHALRSNQTLLSLNL 869

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G   +A AL  N  +++L L  N     GA A+A  ++ N++L+ LHL  N 
Sbjct: 870  RENSISPEGARDIASALCSNRVLQNLDLTANLLQDEGAQAIALAVKENRALKSLHLQWNF 929

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L S +  L +LD+  N+I  +G   ++  +K   SL  + L +  IG 
Sbjct: 930  IQANAAKALGQALQSNRS-LTILDLQENAIGDEGMMALSRALKINTSLTALYLQVASIGV 988

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + DAL  NRT+  +DL GN+I + GA A+A  LK N  +  L+L  N +G DGA 
Sbjct: 989  LGAQALGDALAVNRTLEILDLRGNSIGADGAKAMANALKINPSLQMLNLQENSLGMDGAI 1048

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             ++  L  +  +  + L    IG SGA  +++ ++ N    I+++
Sbjct: 1049 CIATALSGNHGLQHVNLQGNHIGESGARMISEAIKTNAPNCIVEM 1093



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 164/306 (53%), Gaps = 4/306 (1%)

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           ++ + L  N I   G  SLA +LL N ++  L L  N  G  GA ALA  L+ N+ L  L
Sbjct: 696 IQKISLAENQIHNKGTKSLARSLLVNRSLTVLDLRSNSIGPQGAKALADSLKINRVLVSL 755

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N+I D+G + +   L     KL+VL +  N+I   GA  +A+ +K   SL  +   
Sbjct: 756 SLQNNAIKDDGAKFVADALMVNH-KLSVLQLQKNTIGPLGAKSIADALKKNGSLKELIFS 814

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N +G++G++ +A+ALK N+++ T+DL  N+I   G +A+   L+ N  + SL+L  N I
Sbjct: 815 SNSVGNDGSKALAEALKVNQSLITLDLQSNSISDAGVTALTHALRSNQTLLSLNLRENSI 874

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
             +GA+ ++  L  +  +  L L    +   GA+ +A  ++ N  +  L L+ N ++   
Sbjct: 875 SPEGARDIASALCSNRVLQNLDLTANLLQDEGAQAIALAVKENRALKSLHLQWNFIQANA 934

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
           AK L Q+ +  N +LT +DL  N I D+G  A+++ALK N   ++T+L L    +   G 
Sbjct: 935 AKALGQALQ-SNRSLTILDLQENAIGDEGMMALSRALKIN--TSLTALYLQVASIGVLGA 991

Query: 576 SALTDA 581
            AL DA
Sbjct: 992 QALGDA 997



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 3/246 (1%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L L  N   D  +  L S LSS+   +  + +  N I  KG   +A  +   +SL  +
Sbjct: 668 RNLRLDNNQFQDNVMELLGSVLSSKDCYIQKISLAENQIHNKGTKSLARSLLVNRSLTVL 727

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +AD+LK NR + ++ L  N I   GA  +A  L  N  ++ L L  
Sbjct: 728 DLRSNSIGPQGAKALADSLKINRVLVSLSLQNNAIKDDGAKFVADALMVNHKLSVLQLQK 787

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GAK++++ LK +G++  L      +G  G++ +A+ L+ N ++  LDL++N + 
Sbjct: 788 NTIGPLGAKSIADALKKNGSLKELIFSSNSVGNDGSKALAEALKVNQSLITLDLQSNSIS 847

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           D G   L  + +  N+ L S++L  N I  +GA  IA AL +N    + +L+L  N L  
Sbjct: 848 DAGVTALTHALR-SNQTLLSLNLRENSISPEGARDIASALCSNR--VLQNLDLTANLLQD 904

Query: 573 FGQSAL 578
            G  A+
Sbjct: 905 EGAQAI 910


>gi|183985790|gb|AAI66378.1| LOC100158644 protein [Xenopus (Silurana) tropicalis]
          Length = 566

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 227/422 (53%), Gaps = 5/422 (1%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNI 218
           +L+  +++ M    F D  +  LA  L     A + +S A N ++  G+KA    L  N 
Sbjct: 136 QLQYCTNLRMENNGFQDVVMELLASILRAKDCAIQRISLAENRLSNRGVKALGRALMVNR 195

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L  L+L  N IG  G   L ++L  N  +  L L +  ++ EGA+ +A+ L  N  LR 
Sbjct: 196 TLAVLDLHSNNIGPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRA 255

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L +  N I   G  SL+ +L +N  ++ L L+GN  G  GA ALA+ L+ N  L  L L 
Sbjct: 256 LNIQKNNIGAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTLDLQ 315

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            NSI D G+  L SGLS  +  L  L++  NSI  +GA  +AE ++   +LL ++L  N 
Sbjct: 316 SNSISDRGLSLLTSGLSQNR-SLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTANL 374

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + DEG E +A AL++N+++ ++ L  N +    A  +A  L+ N  +  LDL  N +G +
Sbjct: 375 LHDEGMEALARALRENQSLESLHLQWNFLRVASARYLAAALRVNKALRCLDLQENALGDE 434

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA ALS+ LK +  ++ L L    IGASG + +A+ L  N ++  LDLR N +   GAK 
Sbjct: 435 GAAALSDALKENNTLSALYLQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAKA 494

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           LA + K +N  L S++L  N I  DGA  +A A+  N   ++TSL+L  N + + G   +
Sbjct: 495 LAGALK-INNTLQSLNLQENSIVLDGAICLANAVSGNS--SLTSLSLQGNHIGQSGAKVI 551

Query: 579 TD 580
           +D
Sbjct: 552 SD 553



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/363 (34%), Positives = 191/363 (52%), Gaps = 1/363 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  + +D+   N G  G   LAE L  NQ    ++   N I + G +     L +N  L+
Sbjct: 195 RTLAVLDLHSNNIGPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLR 254

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LN+  N IG EGV+ L   L  N  ++ L LS   + D GA A+AE LK+NS L  L+L
Sbjct: 255 ALNIQKNNIGAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTLDL 314

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I   G + L   L +N +++ L+L  N  G  GA ALA+ L  N +L  L L  N 
Sbjct: 315 QSNSISDRGLSLLTSGLSQNRSLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTANL 374

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DEG+ AL   L   +  L  L +  N +    A ++A  ++  K+L  ++L  N +GD
Sbjct: 375 LHDEGMEALARALRENQ-SLESLHLQWNFLRVASARYLAAALRVNKALRCLDLQENALGD 433

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA  ++DALK+N T++ + L G  I + G  ++A  L  N  + +LDL  N IG  GAK
Sbjct: 434 EGAAALSDALKENNTLSALYLQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAK 493

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           AL+  LK +  + +L L    I   GA  +A+ +  N++++ L L+ N +   GAK ++ 
Sbjct: 494 ALAGALKINNTLQSLNLQENSIVLDGAICLANAVSGNSSLTSLSLQGNHIGQSGAKVISD 553

Query: 522 SFK 524
           + K
Sbjct: 554 TIK 556



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 177/343 (51%), Gaps = 1/343 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  +  +   S+++       EG  FLA+SL  N+    ++   N I A G+++  G 
Sbjct: 215 LAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRALNIQKNNIGAEGVESLSGS 274

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L+ L LSGN +GD G   L + L  N+ +  L L S  + D G   +   L  N
Sbjct: 275 LKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTLDLQSNSISDRGLSLLTSGLSQN 334

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L+ L L  N I   G  +LAE+L  NST+  L L  N     G  ALA+ L  N+SL 
Sbjct: 335 RSLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTANLLHDEGMEALARALRENQSLE 394

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            LHL  N +     R L + L   K  L  LD+  N++  +GA  +++ +K   +L  + 
Sbjct: 395 SLHLQWNFLRVASARYLAAALRVNKA-LRCLDLQENALGDEGAAALSDALKENNTLSALY 453

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L    IG  G + +A+AL  NR++ T+DL GNNI  +GA A+A  LK N+ + SL+L  N
Sbjct: 454 LQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAKALAGALKINNTLQSLNLQEN 513

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            I  DGA  L+  +  + ++ +L L    IG SGA+ ++D ++
Sbjct: 514 SIVLDGAICLANAVSGNSSLTSLSLQGNHIGQSGAKVISDTIK 556



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 92/203 (45%), Gaps = 28/203 (13%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  Q L E  +       +D++     DEG+  LA +L  NQ+ E +    N +  A  +
Sbjct: 350 EGAQALAESLRRNSTLLHLDLTANLLHDEGMEALARALRENQSLESLHLQWNFLRVASAR 409

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN---------------AGVERL-- 251
                L+ N AL+ L+L  N +GDEG   L D L +N               +G + L  
Sbjct: 410 YLAAALRVNKALRCLDLQENALGDEGAAALSDALKENNTLSALYLQGTMIGASGTQSLAN 469

Query: 252 ------QLSSVDLRD-----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
                  L ++DLR       GAKA+A  LK N+ L+ L L  N I   G   LA A+  
Sbjct: 470 ALAVNRSLKTLDLRGNNIGLRGAKALAGALKINNTLQSLNLQENSIVLDGAICLANAVSG 529

Query: 301 NSTIRSLHLNGNYGGALGANALA 323
           NS++ SL L GN+ G  GA  ++
Sbjct: 530 NSSLTSLSLQGNHIGQSGAKVIS 552



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E    L++  KE    S++ + G   G  G   LA +L  N++ + +    N I   G K
Sbjct: 434 EGAAALSDALKENNTLSALYLQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAK 493

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A  G L+ N  L++LNL  N I  +G  CL + +  N+ +  L L    +   GAK I++
Sbjct: 494 ALAGALKINNTLQSLNLQENSIVLDGAICLANAVSGNSSLTSLSLQGNHIGQSGAKVISD 553

Query: 269 LLKNNS 274
            +KN++
Sbjct: 554 TIKNSA 559


>gi|354493274|ref|XP_003508768.1| PREDICTED: protein NLRC3 [Cricetulus griseus]
          Length = 1088

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/433 (33%), Positives = 227/433 (52%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +   + +S   N I   G K
Sbjct: 648  SQSVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIQNISLTENQIGNKGAK 707

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  ++D G   +AE
Sbjct: 708  ALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTLTSLGLQSNMIKDNGVMCMAE 767

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  + +L+L  N+I  +G   +A+AL +N +++ L  + N  G  GA ALA+ L+G
Sbjct: 768  ALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELMFSSNTIGDGGAMALAEALKG 827

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  N+I + G+  LM  L   +  L+ L++  NSIS +GA  +A+ +    +
Sbjct: 828  NQGLENLDLQSNAISNTGVAVLMRALCVNQ-TLSSLNLRENSISPEGAQALAQALCMNNT 886

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+ +N ++T + L  N I +  A A+ + L+ N  +T+L
Sbjct: 887  LKHLDLTANLLHDQGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTL 946

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IG  GA+ + + L  N T+ ILDLR 
Sbjct: 947  DLQENAIGDEGASAVAGALKVNTTLTALYLQVASIGTQGAQALGEALAVNRTLEILDLRG 1006

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K +N +L  ++L  N +  DGA  +A AL  N    +  +NL  N
Sbjct: 1007 NDIGVAGAKALANALK-LNSSLRRLNLQENSLGMDGAIYVAAALSENH--GLHHINLQGN 1063

Query: 569  FLTKFGQSALTDA 581
             + + G   +++A
Sbjct: 1064 PIGESGARMISEA 1076



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 187/364 (51%), Gaps = 1/364 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+  ++D+     G +G   LA++L  N+T   +   +N I   G+      L SN  + 
Sbjct: 717  RSLITLDLRSNAIGPQGAKALADALKKNRTLTSLGLQSNMIKDNGVMCMAEALVSNQTIS 776

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L L  N IG  G + + D L  N  ++ L  SS  + D GA A+AE LK N  L  L+L
Sbjct: 777  ILQLQKNLIGPTGAQRMADALKQNKSLKELMFSSNTIGDGGAMALAEALKGNQGLENLDL 836

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G   L  AL  N T+ SL+L  N     GA ALA+ L  N +L+ L L  N 
Sbjct: 837  QSNAISNTGVAVLMRALCVNQTLSSLNLRENSISPEGAQALAQALCMNNTLKHLDLTANL 896

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G +A+   +      L  L +  N I A  A  + + ++  ++L  ++L  N IGD
Sbjct: 897  LHDQGAQAIAVAVGENH-SLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGD 955

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EGA  +A ALK N T+T + L   +I ++GA A+   L  N  +  LDL  N IG  GAK
Sbjct: 956  EGASAVAGALKVNTTLTALYLQVASIGTQGAQALGEALAVNRTLEILDLRGNDIGVAGAK 1015

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA +VA  L  N+ +  ++L+ N + + GA+ +++
Sbjct: 1016 ALANALKLNSSLRRLNLQENSLGMDGAIYVAAALSENHGLHHINLQGNPIGESGARMISE 1075

Query: 522  SFKV 525
            + K 
Sbjct: 1076 AIKT 1079



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 176/358 (49%), Gaps = 1/358 (0%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            +  + L +  K+ R  +S+ +      D G+  +AE+L  NQT   +    N I   G +
Sbjct: 732  QGAKALADALKKNRTLTSLGLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTGAQ 791

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                 L+ N +LK L  S N IGD G   L + L  N G+E L L S  + + G   +  
Sbjct: 792  RMADALKQNKSLKELMFSSNTIGDGGAMALAEALKGNQGLENLDLQSNAISNTGVAVLMR 851

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L  L L  N I   G  +LA+AL  N+T++ L L  N     GA A+A  +  
Sbjct: 852  ALCVNQTLSSLNLRENSISPEGAQALAQALCMNNTLKHLDLTANLLHDQGAQAIAVAVGE 911

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N SL  LHL  N I     RAL   L   +  L  LD+  N+I  +GA  VA  +K   +
Sbjct: 912  NHSLTHLHLQWNFIQAGAARALGQALQLNR-TLTTLDLQENAIGDEGASAVAGALKVNTT 970

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  + L +  IG +GA+ + +AL  NRT+  +DL GN+I   GA A+A  LK NS +  L
Sbjct: 971  LTALYLQVASIGTQGAQALGEALAVNRTLEILDLRGNDIGVAGAKALANALKLNSSLRRL 1030

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            +L  N +G DGA  ++  L  +  ++ + L    IG SGA  +++ ++ N     +++
Sbjct: 1031 NLQENSLGMDGAIYVAAALSENHGLHHINLQGNPIGESGARMISEAIKTNAPTCTVEM 1088



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 144/284 (50%), Gaps = 5/284 (1%)

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           LL+ S IRS     N    L  + L   L      + L L  N   D  +  L S LS +
Sbjct: 630 LLQLSDIRSQE--ANLSLCLSQSVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGK 687

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
             ++  + +  N I  KGA  +A  +   +SL+ ++L  N IG +GA+ +ADALK+NRT+
Sbjct: 688 DCRIQNISLTENQIGNKGAKALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTL 747

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           T++ L  N I   G   +A  L  N  I+ L L  N IG  GA+ +++ LK + ++  L 
Sbjct: 748 TSLGLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELM 807

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
                IG  GA  +A+ L+ N  +  LDL++N + + G   L ++   VN+ L+S++L  
Sbjct: 808 FSSNTIGDGGAMALAEALKGNQGLENLDLQSNAISNTGVAVLMRAL-CVNQTLSSLNLRE 866

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           N I  +GA A+AQAL  N    +  L+L  N L   G  A+  A
Sbjct: 867 NSISPEGAQALAQALCMNN--TLKHLDLTANLLHDQGAQAIAVA 908


>gi|320166278|gb|EFW43177.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 587

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 159/436 (36%), Positives = 229/436 (52%), Gaps = 47/436 (10%)

Query: 154 LNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQ-TAEEVSFAANGITAAGI 207
           +NE  +EL      A   +D++     D     +AE+L  N  T  ++   A  I  A  
Sbjct: 4   MNELQRELYDKVKNATEGLDLNEERIDDVEAQAIAEALKVNTLTWLKLDLGAQAIAEA-- 61

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
                 L+ N  L  LNL GN IGD G K L + L  +  +  L L+   + + GA+AI 
Sbjct: 62  ------LKVNTTLTYLNLDGNQIGDAGAKVLAEALKGHTTLTGLGLNKSQIGEVGAQAIG 115

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E LK NS L +L+L+ N I  +G  ++AEAL  N+T+  L+L+GN  G  GA A+A+ L+
Sbjct: 116 EALKVNSTLTMLDLDANQIGDAGAQAIAEALKVNTTLTWLNLDGNQIGDAGAQAIAQALK 175

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            N +L++L L  N IGD G +A                             + E +K  K
Sbjct: 176 VNSTLKKLFLDANQIGDAGAQA-----------------------------IGEALKVNK 206

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            L+ ++L  N IGD GA+   +ALK N T+T +DL  N I   GA AIA+ LK NS +  
Sbjct: 207 RLIDLSLDGNQIGDAGAKVFGEALKVNSTLTMLDLDANQIGDAGAQAIAQALKVNSTLKK 266

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L L  N IG  GA+A+ E LK +  +  L+L    IG +GA  +A  L+ N T++ L+L 
Sbjct: 267 LFLDANQIGDAGAQAIGEALKVNKRLIDLRLSENHIGDAGANTIAAALKVNTTLTWLNLG 326

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
            N + + GA+ +A++ K VN  LT + L  NEI DDGA A+A AL+ N    +T L L  
Sbjct: 327 ENQIGNVGAEAIAEALK-VNTTLTVLGLHTNEIGDDGACALADALEVN--TTMTKLLLDR 383

Query: 568 NFLTKFGQSALTDAKD 583
           N +T +G SAL DA++
Sbjct: 384 NCMT-YGCSALLDARE 398



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/327 (36%), Positives = 166/327 (50%), Gaps = 1/327 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + +++ G   GD G   LAE+L  + T   +    + I   G +A  
Sbjct: 56  QAIAEALKVNTTLTYLNLDGNQIGDAGAKVLAEALKGHTTLTGLGLNKSQIGEVGAQAIG 115

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L+L  N IGD G + + + L  N  +  L L    + D GA+AIA+ LK
Sbjct: 116 EALKVNSTLTMLDLDANQIGDAGAQAIAEALKVNTTLTWLNLDGNQIGDAGAQAIAQALK 175

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS L+ L L+ N I  +G  ++ EAL  N  +  L L+GN  G  GA    + L+ N +
Sbjct: 176 VNSTLKKLFLDANQIGDAGAQAIGEALKVNKRLIDLSLDGNQIGDAGAKVFGEALKVNST 235

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L L  N IGD G +A+   L      L  L +  N I   GA  + E +K  K L+ 
Sbjct: 236 LTMLDLDANQIGDAGAQAIAQALKVNS-TLKKLFLDANQIGDAGAQAIGEALKVNKRLID 294

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L  N IGD GA  IA ALK N T+T ++LG N I + GA AIA  LK N+ +T L L 
Sbjct: 295 LRLSENHIGDAGANTIAAALKVNTTLTWLNLGENQIGNVGAEAIAEALKVNTTLTVLGLH 354

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKL 478
            N IG DGA AL++ L+ +  +  L L
Sbjct: 355 TNEIGDDGACALADALEVNTTMTKLLL 381



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/302 (37%), Positives = 158/302 (52%), Gaps = 1/302 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E  K     + + ++    G+ G   + E+L  N T   +   AN I  AG +A  
Sbjct: 84  KVLAEALKGHTTLTGLGLNKSQIGEVGAQAIGEALKVNSTLTMLDLDANQIGDAGAQAIA 143

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNL GN IGD G + +   L  N+ +++L L +  + D GA+AI E LK
Sbjct: 144 EALKVNTTLTWLNLDGNQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAIGEALK 203

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L+ N I  +G     EAL  NST+  L L+ N  G  GA A+A+ L+ N +
Sbjct: 204 VNKRLIDLSLDGNQIGDAGAKVFGEALKVNSTLTMLDLDANQIGDAGAQAIAQALKVNST 263

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L++L L  N IGD G +A+   L   K +L  L +  N I   GA  +A  +K   +L W
Sbjct: 264 LKKLFLDANQIGDAGAQAIGEALKVNK-RLIDLRLSENHIGDAGANTIAAALKVNTTLTW 322

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +NL  N IG+ GAE IA+ALK N T+T + L  N I   GA A+A  L+ N+ +T L L 
Sbjct: 323 LNLGENQIGNVGAEAIAEALKVNTTLTVLGLHTNEIGDDGACALADALEVNTTMTKLLLD 382

Query: 452 YN 453
            N
Sbjct: 383 RN 384



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 157/305 (51%), Gaps = 3/305 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + +D+     GD G   +AE+L  N T   ++   N I  AG +A  
Sbjct: 112 QAIGEALKVNSTLTMLDLDANQIGDAGAQAIAEALKVNTTLTWLNLDGNQIGDAGAQAIA 171

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  LK L L  N IGD G + + + L  N  +  L L    + D GAK   E LK
Sbjct: 172 QALKVNSTLKKLFLDANQIGDAGAQAIGEALKVNKRLIDLSLDGNQIGDAGAKVFGEALK 231

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS L +L+L+ N I  +G  ++A+AL  NST++ L L+ N  G  GA A+ + L+ NK 
Sbjct: 232 VNSTLTMLDLDANQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAIGEALKVNKR 291

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L +L L  N IGD G   + + L      L  L++G N I   GA  +AE +K   +L  
Sbjct: 292 LIDLRLSENHIGDAGANTIAAALKVNT-TLTWLNLGENQIGNVGAEAIAEALKVNTTLTV 350

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT-SLDL 450
           + L+ N+IGD+GA  +ADAL+ N T+T + L   N  + G SA+    +DN  +  + D 
Sbjct: 351 LGLHTNEIGDDGACALADALEVNTTMTKL-LLDRNCMTYGCSALLDAREDNCRLELTFDD 409

Query: 451 AYNPI 455
             NP+
Sbjct: 410 QINPL 414


>gi|348502188|ref|XP_003438651.1| PREDICTED: protein NLRC3 [Oreochromis niloticus]
          Length = 1130

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 154/430 (35%), Positives = 223/430 (51%), Gaps = 5/430 (1%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
            T+     +L   S + +   +F D+ +  L   L       +++S A N I+  G KA  
Sbjct: 693  TVKCLLPQLLYCSHLRLENNHFKDDVMELLGSLLSAKDCHIQKISLADNAISNKGAKALS 752

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N  L +LNL  N IG +G K L + L  N  +  +   +  + +EGA+++AE+L+
Sbjct: 753  RALLVNRTLTSLNLRNNNIGSKGAKFLAEALKMNQVLTSINFQNNAIEEEGAQSLAEVLQ 812

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G   +AEAL  N T+  L L GN  G  G  ALA+ L  N +
Sbjct: 813  CNRKLVSLNLRKNTIAAGGAKRIAEALKTNRTLTKLILCGNQLGDKGTVALAEALAVNHT 872

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  LHL  NSI ++G+ AL   L    G L  L++  NSI  +GA ++A  +    +L  
Sbjct: 873  LLSLHLQSNSISNKGMTALTKALRLNHG-LVSLNLRENSIGVEGAKNMAHALHENNTLQD 931

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            ++L  N + D+G + IA A+K NR +T++ L  N I S    A+A  L  NS +  LDL 
Sbjct: 932  LDLTANLLHDDGIQAIAGAIKFNRGLTSLHLQWNFIKSTATKALAHALLSNSTMQLLDLQ 991

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             N IG +G   L+E LK + ++ TL L     G SGA  +A+ L  N T+  LDLR N +
Sbjct: 992  ENAIGNEGVTFLAEALKTNASLRTLCLQGVSAGTSGAIKMAEALMTNQTLQTLDLRGNTV 1051

Query: 512  RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
              EGAK LA + K  N +L S++L  N +  DGA  IA ALK N    +T +NL  N + 
Sbjct: 1052 GMEGAKALANALK-SNRSLKSLNLQENSLGMDGAIFIATALKGNHQ--LTYINLQGNGIG 1108

Query: 572  KFGQSALTDA 581
            + G   ++DA
Sbjct: 1109 ESGAKVISDA 1118



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 195/363 (53%), Gaps = 1/363 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+++   N G +G  FLAE+L  NQ    ++F  N I   G ++   VLQ N  L 
Sbjct: 759  RTLTSLNLRNNNIGSKGAKFLAEALKMNQVLTSINFQNNAIEEEGAQSLAEVLQCNRKLV 818

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            +LNL  N I   G K + + L  N  + +L L    L D+G  A+AE L  N  L  L L
Sbjct: 819  SLNLRKNTIAAGGAKRIAEALKTNRTLTKLILCGNQLGDKGTVALAEALAVNHTLLSLHL 878

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I   G T+L +AL  N  + SL+L  N  G  GA  +A  L  N +L++L L  N 
Sbjct: 879  QSNSISNKGMTALTKALRLNHGLVSLNLRENSIGVEGAKNMAHALHENNTLQDLDLTANL 938

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+GI+A+   +   +G L  L +  N I +     +A  + +  ++  ++L  N IG+
Sbjct: 939  LHDDGIQAIAGAIKFNRG-LTSLHLQWNFIKSTATKALAHALLSNSTMQLLDLQENAIGN 997

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EG   +A+ALK N ++ T+ L G +  + GA  +A  L  N  + +LDL  N +G +GAK
Sbjct: 998  EGVTFLAEALKTNASLRTLCLQGVSAGTSGAIKMAEALMTNQTLQTLDLRGNTVGMEGAK 1057

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++ +L L    +G  GA F+A  L+ N+ ++ ++L+ NG+ + GAK ++ 
Sbjct: 1058 ALANALKSNRSLKSLNLQENSLGMDGAIFIATALKGNHQLTYINLQGNGIGESGAKVISD 1117

Query: 522  SFK 524
            + +
Sbjct: 1118 AIR 1120



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 149/285 (52%), Gaps = 1/285 (0%)

Query: 156  EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
            E  K  R  + + + G   GD+G   LAE+L  N T   +   +N I+  G+ A    L+
Sbjct: 837  EALKTNRTLTKLILCGNQLGDKGTVALAEALAVNHTLLSLHLQSNSISNKGMTALTKALR 896

Query: 216  SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
             N  L +LNL  N IG EG K +   L +N  ++ L L++  L D+G +AIA  +K N  
Sbjct: 897  LNHGLVSLNLRENSIGVEGAKNMAHALHENNTLQDLDLTANLLHDDGIQAIAGAIKFNRG 956

Query: 276  LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            L  L L  N I  +   +LA ALL NST++ L L  N  G  G   LA+ L+ N SLR L
Sbjct: 957  LTSLHLQWNFIKSTATKALAHALLSNSTMQLLDLQENAIGNEGVTFLAEALKTNASLRTL 1016

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L G S G  G   +   L + +  L  LD+  N++  +GA  +A  +K+ +SL  +NL 
Sbjct: 1017 CLQGVSAGTSGAIKMAEALMTNQ-TLQTLDLRGNTVGMEGAKALANALKSNRSLKSLNLQ 1075

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             N +G +GA  IA ALK N  +T I+L GN I   GA  I+  ++
Sbjct: 1076 ENSLGMDGAIFIATALKGNHQLTYINLQGNGIGESGAKVISDAIR 1120


>gi|281343653|gb|EFB19237.1| hypothetical protein PANDA_014381 [Ailuropoda melanoleuca]
          Length = 1086

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 155/434 (35%), Positives = 230/434 (52%), Gaps = 7/434 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            SK  L     +L    S+ +    F D  +  L   L G +   + +S A N I   G K
Sbjct: 646  SKGVLQSLLPQLLYCRSLRLDNNQFQDPVMDLLGSVLSGKDCRIQRISLAENQIGNKGAK 705

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L  L+L  N IG +G K L D L  N  +  L L S  +RD GA+++AE
Sbjct: 706  ALARSLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAFLSLQSNAIRDNGARSVAE 765

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N I   G   +A+ L +N +++ L  + N  G  GA ALA  L+ 
Sbjct: 766  ALAANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKV 825

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCK 387
            N+ L  L L  NSI D G+ ALM  L + +  L  L++  NSIS++GA  +A  +  NC 
Sbjct: 826  NQGLESLDLQSNSISDAGVAALMGALCANQ-TLISLNLRENSISSEGARELARALCINC- 883

Query: 388  SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            +L  ++L  N + D+GA+ IA A+++N+ +T++ L  N I +  A A+ + L+ N  +TS
Sbjct: 884  TLKNLDLTANLLQDQGAQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTS 943

Query: 448  LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            LDL  N IG +GA A++  LK +  +  L L    IG+ GA+ + D L  N T+ ILDLR
Sbjct: 944  LDLQENAIGDEGASAVASALKANTALTALYLQVASIGSRGAQALGDALAVNKTLEILDLR 1003

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
             N +   GAK LA + K VN +L  ++L  N +  DGA  +A AL  N   ++  +NL  
Sbjct: 1004 GNTIGAAGAKALANALK-VNSSLRRLNLQENSLGMDGAICVATALSGNH--SLQHINLQG 1060

Query: 568  NFLTKFGQSALTDA 581
            N + + G   +++A
Sbjct: 1061 NHIGESGARMISEA 1074



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 194/364 (53%), Gaps = 1/364 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +++D+   + G +G   LA++L  N+T   +S  +N I   G ++    L +N  L 
Sbjct: 715  RSLTALDLRSNSIGPQGAKALADALKINRTLAFLSLQSNAIRDNGARSVAEALAANRTLS 774

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L  SS  + D GA+A+A  LK N  L  L+L
Sbjct: 775  VLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQGLESLDL 834

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G  +L  AL  N T+ SL+L  N   + GA  LA+ L  N +L+ L L  N 
Sbjct: 835  QSNSISDAGVAALMGALCANQTLISLNLRENSISSEGARELARALCINCTLKNLDLTANL 894

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G +A+   +   +  L  L +  N I A  A  + + ++  +SL  ++L  N IGD
Sbjct: 895  LQDQGAQAIAVAMRENQA-LTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENAIGD 953

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EGA  +A ALK N  +T + L   +I S+GA A+   L  N  +  LDL  N IGA GAK
Sbjct: 954  EGASAVASALKANTALTALYLQVASIGSRGAQALGDALAVNKTLEILDLRGNTIGAAGAK 1013

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA  VA  L  N+++  ++L+ N + + GA+ +++
Sbjct: 1014 ALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHSLQHINLQGNHIGESGARMISE 1073

Query: 522  SFKV 525
            + + 
Sbjct: 1074 AIRT 1077



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/337 (33%), Positives = 164/337 (48%), Gaps = 1/337 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  + + +      D G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 743  RTLAFLSLQSNAIRDNGARSVAEALAANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLK 802

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N IGD G + L   L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 803  ELIFSSNSIGDGGAEALAMALKVNQGLESLDLQSNSISDAGVAALMGALCANQTLISLNL 862

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G   LA AL  N T+++L L  N     GA A+A  +  N++L  LHL  N 
Sbjct: 863  RENSISSEGARELARALCINCTLKNLDLTANLLQDQGAQAIAVAMRENQALTSLHLQWNF 922

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L   +  L  LD+  N+I  +GA  VA  +K   +L  + L +  IG 
Sbjct: 923  IQAGAAKALGQALQLNR-SLTSLDLQENAIGDEGASAVASALKANTALTALYLQVASIGS 981

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + DAL  N+T+  +DL GN I + GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 982  RGAQALGDALAVNKTLEILDLRGNTIGAAGAKALANALKVNSSLRRLNLQENSLGMDGAI 1041

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  + ++  + L    IG SGA  +++ +R N
Sbjct: 1042 CVATALSGNHSLQHINLQGNHIGESGARMISEAIRTN 1078



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+   +  S  + GD G   LA +L  NQ  E +   +N I+ AG+ A  
Sbjct: 789  QRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQGLESLDLQSNSISDAGVAALM 848

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            G L +N  L +LNL  N I  EG + L   L  N  ++ L L++  L+D+GA+AIA  ++
Sbjct: 849  GALCANQTLISLNLRENSISSEGARELARALCINCTLKNLDLTANLLQDQGAQAIAVAMR 908

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N ++ SL L  N  G  GA+A+A  L+ N +
Sbjct: 909  ENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENAIGDEGASAVASALKANTA 968

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG  G +AL   L+  K  L +LD+  N+I A GA  +A  +K   SL  
Sbjct: 969  LTALYLQVASIGSRGAQALGDALAVNK-TLEILDLRGNTIGAAGAKALANALKVNSSLRR 1027

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +GA  +A AL  N ++  I+L GN+I   GA  I+  ++ N+   ++++
Sbjct: 1028 LNLQENSLGMDGAICVATALSGNHSLQHINLQGNHIGESGARMISEAIRTNAPSCTVEM 1086



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 112/320 (35%), Positives = 158/320 (49%), Gaps = 33/320 (10%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAK 324
           +  LL      R L L+NN         L   L  ++  I+ + L  N  G  GA ALA+
Sbjct: 650 LQSLLPQLLYCRSLRLDNNQFQDPVMDLLGSVLSGKDCRIQRISLAENQIGNKGAKALAR 709

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N+SL  L L  NSIG +G +AL   L   +  LA L + +N+I   GA  VAE + 
Sbjct: 710 SLLVNRSLTALDLRSNSIGPQGAKALADALKINR-TLAFLSLQSNAIRDNGARSVAEALA 768

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             ++L  ++L  N IG  GA+++AD LKQNR++  +    N+I   GA A+A  LK N  
Sbjct: 769 ANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQG 828

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           + SLDL  N I   G  AL                   +GA         L  N T+  L
Sbjct: 829 LESLDLQSNSISDAGVAAL-------------------MGA---------LCANQTLISL 860

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           +LR N +  EGA+ LA++   +N  L ++DL  N ++D GA AIA A++ N+  A+TSL+
Sbjct: 861 NLRENSISSEGARELARAL-CINCTLKNLDLTANLLQDQGAQAIAVAMRENQ--ALTSLH 917

Query: 565 LANNFLTKFGQSALTDAKDL 584
           L  NF+      AL  A  L
Sbjct: 918 LQWNFIQAGAAKALGQALQL 937


>gi|395747418|ref|XP_002826110.2| PREDICTED: protein NLRC3 [Pongo abelii]
          Length = 1037

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 153/433 (35%), Positives = 220/433 (50%), Gaps = 33/433 (7%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G                            AKA+A+
Sbjct: 685  ALARSLLVNRSLTSLDLRGNSIGPQG----------------------------AKALAD 716

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             LK N  L  L L  N I   G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ 
Sbjct: 717  ALKINRTLTSLSLQGNTIGDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ 776

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+SL+EL L  NSIGD G +AL   L   +G L  LD+  NSIS +GA  +A  ++   +
Sbjct: 777  NRSLKELMLSSNSIGDGGGKALAEALKVNQG-LESLDLRENSISPEGAQAIAHALRANST 835

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSL
Sbjct: 836  LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 895

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG DGA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR 
Sbjct: 896  DLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRG 955

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  +A AL  N    +  +NL  N
Sbjct: 956  NAIGVAGAKALANALK-VNSSLRKLNLQENSLEMDGAICVATALSGNHR--LQHINLQGN 1012

Query: 569  FLTKFGQSALTDA 581
             +   G   +++A
Sbjct: 1013 HIGDSGARMISEA 1025



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/345 (34%), Positives = 177/345 (51%), Gaps = 1/345 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+ G + G +G   LA++L  N+T   +S   N I   G ++    L SN  L 
Sbjct: 694  RSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTIGDDGARSMAEALASNRTLS 753

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L LSS  + D G KA+AE LK N  L  L+L
Sbjct: 754  MLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGGKALAEALKVNQGLESLDL 813

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G  ++A AL  NST+++L L  N     GA A+A  +  N++L  LHL  N 
Sbjct: 814  RENSISPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNF 873

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L   +  L  LD+  N+I   GA  VA  +K   +L  + L +  IG 
Sbjct: 874  IQAGAAQALGQALQLNR-SLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGA 932

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +  DGA 
Sbjct: 933  PGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRKLNLQENSLEMDGAI 992

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             ++  L  +  +  + L    IG SGA  +++ ++ N     +++
Sbjct: 993  CVATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1037


>gi|392331630|ref|XP_003752343.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3-like [Rattus
            norvegicus]
 gi|392351031|ref|XP_003750824.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3-like [Rattus
            norvegicus]
          Length = 1157

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 143/433 (33%), Positives = 228/433 (52%), Gaps = 5/433 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S++ L     +L    S+ +    F D  +  L   L G +   +++S A N I   G +
Sbjct: 717  SQRVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIQKISLAENQIGNKGAR 776

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                 L  N +L TL+L  N IG +G K L D L  N  +  L L S  ++D+G   +AE
Sbjct: 777  GLARSLLVNRSLVTLDLRSNSIGPQGAKALADALKINRTLTSLSLQSNVIKDDGVMYMAE 836

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N I+  L+L  N+I   G   +A+AL +N ++R L  + N  G  GA ALA+ L+ 
Sbjct: 837  ALVSNQIISTLQLQKNLIGPRGAQQMADALKKNRSLRELMFSSNTIGDRGAMALAEALKV 896

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  N+I + G+  LM  L + +  L+ L++  NSIS +GA  +A+ +    +
Sbjct: 897  NQGLENLDLQSNAISNTGVAVLMRALCTNQ-TLSSLNLRENSISPEGAQALAQALCRNTT 955

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D+GA+ IA A+ +N ++T + L  N I +  A A+ + L+ N  +T+L
Sbjct: 956  LKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQLNRTLTTL 1015

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L  N T+ ILDLR 
Sbjct: 1016 DLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRTLEILDLRG 1075

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA   K +N +L  ++L  N +  DGA  +A AL  N    +  +NL  N
Sbjct: 1076 NDVGVAGAKALANGLK-LNSSLRRLNLQENSLGMDGAIYVATALSENH--GLHHINLQGN 1132

Query: 569  FLTKFGQSALTDA 581
             + + G   ++ A
Sbjct: 1133 PIGESGARMISQA 1145



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/363 (33%), Positives = 190/363 (52%), Gaps = 1/363 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+  ++D+   + G +G   LA++L  N+T   +S  +N I   G+      L SN  + 
Sbjct: 786  RSLVTLDLRSNSIGPQGAKALADALKINRTLTSLSLQSNVIKDDGVMYMAEALVSNQIIS 845

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TL L  N IG  G + + D L  N  +  L  SS  + D GA A+AE LK N  L  L+L
Sbjct: 846  TLQLQKNLIGPRGAQQMADALKKNRSLRELMFSSNTIGDRGAMALAEALKVNQGLENLDL 905

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G   L  AL  N T+ SL+L  N     GA ALA+ L  N +L+ L L  N 
Sbjct: 906  QSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQALCRNTTLKHLDLTANL 965

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G +A+ + +      L  L +  N I A  A  + + ++  ++L  ++L  N IGD
Sbjct: 966  LHDQGAQAIATAVGE-NCSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGD 1024

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EGA  +A ALK N T+T + L   +I S+GA A+   L  N  +  LDL  N +G  GAK
Sbjct: 1025 EGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRTLEILDLRGNDVGVAGAK 1084

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA +VA  L  N+ +  ++L+ N + + GA+ ++Q
Sbjct: 1085 ALANGLKLNSSLRRLNLQENSLGMDGAIYVATALSENHGLHHINLQGNPIGESGARMISQ 1144

Query: 522  SFK 524
            + +
Sbjct: 1145 AIE 1147



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 169/345 (48%), Gaps = 1/345 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G+ ++AE+L  NQ    +    N I   G +     L+ N +L+
Sbjct: 814  RTLTSLSLQSNVIKDDGVMYMAEALVSNQIISTLQLQKNLIGPRGAQQMADALKKNRSLR 873

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N IGD G   L + L  N G+E L L S  + + G   +   L  N  L  L L
Sbjct: 874  ELMFSSNTIGDRGAMALAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNL 933

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G  +LA+AL  N+T++ L L  N     GA A+A  +  N SL  LHL  N 
Sbjct: 934  RENSISPEGAQALAQALCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNF 993

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     RAL   L   +  L  LD+  N+I  +GA  VA  +K   +L  + L +  IG 
Sbjct: 994  IQAGAARALGQALQLNR-TLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGS 1052

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            +GA+ + +AL  NRT+  +DL GN++   GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 1053 QGAQALGEALAVNRTLEILDLRGNDVGVAGAKALANGLKLNSSLRRLNLQENSLGMDGAI 1112

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             ++  L  +  ++ + L    IG SGA  ++  +  N     +++
Sbjct: 1113 YVATALSENHGLHHINLQGNPIGESGARMISQAIEKNAPTCTVEM 1157



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 153/299 (51%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+   +  S    GD G   LAE+L  NQ  E +   +N I+  G+    
Sbjct: 860  QQMADALKKNRSLRELMFSSNTIGDRGAMALAEALKVNQGLENLDLQSNAISNTGVAVLM 919

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L +N  L +LNL  N I  EG + L   L  N  ++ L L++  L D+GA+AIA  + 
Sbjct: 920  RALCTNQTLSSLNLRENSISPEGAQALAQALCRNTTLKHLDLTANLLHDQGAQAIATAVG 979

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N T+ +L L  N  G  GA+++A  L+ N +
Sbjct: 980  ENCSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTT 1039

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG +G +AL   L+  +  L +LD+  N +   GA  +A  +K   SL  
Sbjct: 1040 LTALYLQVASIGSQGAQALGEALAVNR-TLEILDLRGNDVGVAGAKALANGLKLNSSLRR 1098

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +GA  +A AL +N  +  I+L GN I   GA  I++ ++ N+   ++++
Sbjct: 1099 LNLQENSLGMDGAIYVATALSENHGLHHINLQGNPIGESGARMISQAIEKNAPTCTVEM 1157



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 95/202 (47%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L +          +D++     D+G   +A ++G N +   +    N I A   +
Sbjct: 941  EGAQALAQALCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAAR 1000

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    LQ N  L TL+L  N IGDEG   +   L  N  +  L L    +  +GA+A+ E
Sbjct: 1001 ALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGE 1060

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L +L+L  N +  +G  +LA  L  NS++R L+L  N  G  GA  +A  L  
Sbjct: 1061 ALAVNRTLEILDLRGNDVGVAGAKALANGLKLNSSLRRLNLQENSLGMDGAIYVATALSE 1120

Query: 329  NKSLRELHLHGNSIGDEGIRAL 350
            N  L  ++L GN IG+ G R +
Sbjct: 1121 NHGLHHINLQGNPIGESGARMI 1142


>gi|301779075|ref|XP_002924946.1| PREDICTED: protein NLRC3-like [Ailuropoda melanoleuca]
          Length = 1066

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 155/434 (35%), Positives = 230/434 (52%), Gaps = 7/434 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            SK  L     +L    S+ +    F D  +  L   L G +   + +S A N I   G K
Sbjct: 626  SKGVLQSLLPQLLYCRSLRLDNNQFQDPVMDLLGSVLSGKDCRIQRISLAENQIGNKGAK 685

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L  L+L  N IG +G K L D L  N  +  L L S  +RD GA+++AE
Sbjct: 686  ALARSLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAFLSLQSNAIRDNGARSVAE 745

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L VL L  N I   G   +A+ L +N +++ L  + N  G  GA ALA  L+ 
Sbjct: 746  ALAANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKV 805

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCK 387
            N+ L  L L  NSI D G+ ALM  L + +  L  L++  NSIS++GA  +A  +  NC 
Sbjct: 806  NQGLESLDLQSNSISDAGVAALMGALCANQ-TLISLNLRENSISSEGARELARALCINC- 863

Query: 388  SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            +L  ++L  N + D+GA+ IA A+++N+ +T++ L  N I +  A A+ + L+ N  +TS
Sbjct: 864  TLKNLDLTANLLQDQGAQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTS 923

Query: 448  LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            LDL  N IG +GA A++  LK +  +  L L    IG+ GA+ + D L  N T+ ILDLR
Sbjct: 924  LDLQENAIGDEGASAVASALKANTALTALYLQVASIGSRGAQALGDALAVNKTLEILDLR 983

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
             N +   GAK LA + K VN +L  ++L  N +  DGA  +A AL  N   ++  +NL  
Sbjct: 984  GNTIGAAGAKALANALK-VNSSLRRLNLQENSLGMDGAICVATALSGNH--SLQHINLQG 1040

Query: 568  NFLTKFGQSALTDA 581
            N + + G   +++A
Sbjct: 1041 NHIGESGARMISEA 1054



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 194/364 (53%), Gaps = 1/364 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +++D+   + G +G   LA++L  N+T   +S  +N I   G ++    L +N  L 
Sbjct: 695  RSLTALDLRSNSIGPQGAKALADALKINRTLAFLSLQSNAIRDNGARSVAEALAANRTLS 754

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L  SS  + D GA+A+A  LK N  L  L+L
Sbjct: 755  VLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQGLESLDL 814

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G  +L  AL  N T+ SL+L  N   + GA  LA+ L  N +L+ L L  N 
Sbjct: 815  QSNSISDAGVAALMGALCANQTLISLNLRENSISSEGARELARALCINCTLKNLDLTANL 874

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G +A+   +   +  L  L +  N I A  A  + + ++  +SL  ++L  N IGD
Sbjct: 875  LQDQGAQAIAVAMRENQA-LTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENAIGD 933

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EGA  +A ALK N  +T + L   +I S+GA A+   L  N  +  LDL  N IGA GAK
Sbjct: 934  EGASAVASALKANTALTALYLQVASIGSRGAQALGDALAVNKTLEILDLRGNTIGAAGAK 993

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA  VA  L  N+++  ++L+ N + + GA+ +++
Sbjct: 994  ALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHSLQHINLQGNHIGESGARMISE 1053

Query: 522  SFKV 525
            + + 
Sbjct: 1054 AIRT 1057



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/337 (33%), Positives = 164/337 (48%), Gaps = 1/337 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  + + +      D G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 723  RTLAFLSLQSNAIRDNGARSVAEALAANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLK 782

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N IGD G + L   L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 783  ELIFSSNSIGDGGAEALAMALKVNQGLESLDLQSNSISDAGVAALMGALCANQTLISLNL 842

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G   LA AL  N T+++L L  N     GA A+A  +  N++L  LHL  N 
Sbjct: 843  RENSISSEGARELARALCINCTLKNLDLTANLLQDQGAQAIAVAMRENQALTSLHLQWNF 902

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     +AL   L   +  L  LD+  N+I  +GA  VA  +K   +L  + L +  IG 
Sbjct: 903  IQAGAAKALGQALQLNR-SLTSLDLQENAIGDEGASAVASALKANTALTALYLQVASIGS 961

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + DAL  N+T+  +DL GN I + GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 962  RGAQALGDALAVNKTLEILDLRGNTIGAAGAKALANALKVNSSLRRLNLQENSLGMDGAI 1021

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  + ++  + L    IG SGA  +++ +R N
Sbjct: 1022 CVATALSGNHSLQHINLQGNHIGESGARMISEAIRTN 1058



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+   +  S  + GD G   LA +L  NQ  E +   +N I+ AG+ A  
Sbjct: 769  QRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQGLESLDLQSNSISDAGVAALM 828

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            G L +N  L +LNL  N I  EG + L   L  N  ++ L L++  L+D+GA+AIA  ++
Sbjct: 829  GALCANQTLISLNLRENSISSEGARELARALCINCTLKNLDLTANLLQDQGAQAIAVAMR 888

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N ++ SL L  N  G  GA+A+A  L+ N +
Sbjct: 889  ENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQENAIGDEGASAVASALKANTA 948

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG  G +AL   L+  K  L +LD+  N+I A GA  +A  +K   SL  
Sbjct: 949  LTALYLQVASIGSRGAQALGDALAVNK-TLEILDLRGNTIGAAGAKALANALKVNSSLRR 1007

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +GA  +A AL  N ++  I+L GN+I   GA  I+  ++ N+   ++++
Sbjct: 1008 LNLQENSLGMDGAICVATALSGNHSLQHINLQGNHIGESGARMISEAIRTNAPSCTVEM 1066



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 112/320 (35%), Positives = 158/320 (49%), Gaps = 33/320 (10%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAK 324
           +  LL      R L L+NN         L   L  ++  I+ + L  N  G  GA ALA+
Sbjct: 630 LQSLLPQLLYCRSLRLDNNQFQDPVMDLLGSVLSGKDCRIQRISLAENQIGNKGAKALAR 689

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N+SL  L L  NSIG +G +AL   L   +  LA L + +N+I   GA  VAE + 
Sbjct: 690 SLLVNRSLTALDLRSNSIGPQGAKALADALKINR-TLAFLSLQSNAIRDNGARSVAEALA 748

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             ++L  ++L  N IG  GA+++AD LKQNR++  +    N+I   GA A+A  LK N  
Sbjct: 749 ANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQG 808

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           + SLDL  N I   G  AL                   +GA         L  N T+  L
Sbjct: 809 LESLDLQSNSISDAGVAAL-------------------MGA---------LCANQTLISL 840

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           +LR N +  EGA+ LA++   +N  L ++DL  N ++D GA AIA A++ N+  A+TSL+
Sbjct: 841 NLRENSISSEGARELARAL-CINCTLKNLDLTANLLQDQGAQAIAVAMRENQ--ALTSLH 897

Query: 565 LANNFLTKFGQSALTDAKDL 584
           L  NF+      AL  A  L
Sbjct: 898 LQWNFIQAGAAKALGQALQL 917


>gi|449475581|ref|XP_002192566.2| PREDICTED: protein NLRC3 [Taeniopygia guttata]
          Length = 1007

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 154/416 (37%), Positives = 225/416 (54%), Gaps = 4/416 (0%)

Query: 166 SVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S+ +    F D+ +  L   L G +   + +S A N I+  G KA    L  N +L  L+
Sbjct: 582 SLRLDNNQFKDDVMELLGSVLSGKDCQIQRLSLAENQISNKGAKALARSLLVNRSLMVLD 641

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N IG  G K L D L  N  +  L L    ++++GA  +AE L  N  L  L L  N
Sbjct: 642 LRSNSIGPTGAKALADALKKNQILLSLNLQHNSIKEDGATFLAEALLTNHRLVTLHLQKN 701

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G   +AEAL +N ++R L L+ N  G  G+ ALA+ L  N SL+ L L  NSI  
Sbjct: 702 GIGAQGTRKMAEALKQNCSLRELILSSNSVGDNGSIALAEALRVNHSLQSLDLQSNSISS 761

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G+ AL + L S KG L+ L++  NSIS +G   +A  +++  +L  ++L  N + D+G 
Sbjct: 762 AGVTALTAALCSNKGLLS-LNLRENSISKEGGPAIARALRSNSTLRKLDLAANLLHDDGG 820

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + IA A+ +NR +T++ L  N I +K A+A+A+ L+ NS + SLDL  N IG +G  ALS
Sbjct: 821 KAIASAIGENRALTSLHLQWNFIQAKAATALAQALQSNSSLASLDLQENAIGDEGVAALS 880

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
             LK +  +  L L    +G +GA+ +A+ L  N ++ ILDLR N L   GAK +A + K
Sbjct: 881 AALKVNTTLADLHLQVASVGVAGAQALAEALMVNKSLQILDLRGNSLGPAGAKAVANALK 940

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
            VN +L  + L  N +  DGA  IA ALK N  +  TS NL  N + + G   ++D
Sbjct: 941 -VNRSLRWLKLQENSLGMDGAICIATALKGNHGL-TTSSNLQGNRIGQSGAKMISD 994



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 184/373 (49%), Gaps = 28/373 (7%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+   +D+   + G  G   LA++L  NQ    ++   N I   G       L +N  L 
Sbjct: 635  RSLMVLDLRSNSIGPTGAKALADALKKNQILLSLNLQHNSIKEDGATFLAEALLTNHRLV 694

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TL+L  N IG +G + + + L  N  +  L LSS  + D G+ A+AE L+ N  L+ L+L
Sbjct: 695  TLHLQKNGIGAQGTRKMAEALKQNCSLRELILSSNSVGDNGSIALAEALRVNHSLQSLDL 754

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G T+L  AL  N  + SL+L  N     G  A+A+ L  N +LR+L L  N 
Sbjct: 755  QSNSISSAGVTALTAALCSNKGLLSLNLRENSISKEGGPAIARALRSNSTLRKLDLAANL 814

Query: 342  IGDEGIRALMSGLSSRKG---------------------------KLAVLDIGNNSISAK 374
            + D+G +A+ S +   +                             LA LD+  N+I  +
Sbjct: 815  LHDDGGKAIASAIGENRALTSLHLQWNFIQAKAATALAQALQSNSSLASLDLQENAIGDE 874

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   ++  +K   +L  ++L +  +G  GA+ +A+AL  N+++  +DL GN++   GA A
Sbjct: 875  GVAALSAALKVNTTLADLHLQVASVGVAGAQALAEALMVNKSLQILDLRGNSLGPAGAKA 934

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVAD 493
            +A  LK N  +  L L  N +G DGA  ++  LK  HG   +  L   +IG SGA+ ++D
Sbjct: 935  VANALKVNRSLRWLKLQENSLGMDGAICIATALKGNHGLTTSSNLQGNRIGQSGAKMISD 994

Query: 494  MLRYNNTISILDL 506
             +R N+   ++D+
Sbjct: 995  TIRSNSPDCVVDV 1007


>gi|428176268|gb|EKX45153.1| hypothetical protein GUITHDRAFT_94709 [Guillardia theta CCMP2712]
          Length = 605

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/410 (34%), Positives = 223/410 (54%), Gaps = 4/410 (0%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +  S+ +   N GDE    +  +L  N T   +  + N I A G  A    LQ+N  + +
Sbjct: 132 SIHSLYLDNNNAGDEFGKDMGVTLTMNSTLRFLDLSDNDIKATGAMALAKALQNNSVVTS 191

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           +N+S N I +EG   +  +L+ N  +++L++S   + D GA  +A++L  NS LR+ ++ 
Sbjct: 192 MNISRNNIANEGATEIARMLLTNTSLQQLRMSWNTINDGGAHELAKVLSENSTLRLFDIA 251

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N +   G T LA+AL  N++I +LHL+GN     GA  +A  L  NKSL+EL+L  N I
Sbjct: 252 DNRVSSVGATELAKALRVNNSITALHLSGNGIAGPGAQEVAAALHVNKSLQELYLAWNCI 311

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            + G +AL   L      L  LD+G N I  +GA H+A  +    +L  ++L+ N + +E
Sbjct: 312 VEHGAKALADALCENT-TLTTLDMGANGIGKEGASHIARALTQNTTLKVLHLHGNVLKEE 370

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           G ++IA AL+ N+ +  +DL GN I       +A  +K N  + +L LA N I   GA  
Sbjct: 371 GPKQIAKALQTNKFLEFLDLDGNEIGVNNIKELAESVKINCSLQTLKLARNKINDIGAWE 430

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           L+E LK + ++  L L    +  +GA  + D L  NNT+  L L  N +++ GA  +AQ+
Sbjct: 431 LAEALKINRSLTKLDLTRNNVEETGATGLNDCLHINNTLRELHLSYNKIKETGAMSIAQA 490

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
              VN  L ++ +A N+I D GA  IA+AL AN    + +L+L  N ++K
Sbjct: 491 IN-VNTTLHTLLIADNDIPDAGAMKIAEALAANS--TIHTLDLLGNTISK 537



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 215/429 (50%), Gaps = 7/429 (1%)

Query: 156 EFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E +K +   S++    +S     D G   +A +L  N +   +    N       K    
Sbjct: 94  ELSKAIETNSNLHILHLSCNRIEDAGCRMIALALRNNNSIHSLYLDNNNAGDEFGKDMGV 153

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L  N  L+ L+LS N I   G   L   L +N+ V  + +S  ++ +EGA  IA +L  
Sbjct: 154 TLTMNSTLRFLDLSDNDIKATGAMALAKALQNNSVVTSMNISRNNIANEGATEIARMLLT 213

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L+ L ++ N I+  G   LA+ L ENST+R   +  N   ++GA  LAK L  N S+
Sbjct: 214 NTSLQQLRMSWNTINDGGAHELAKVLSENSTLRLFDIADNRVSSVGATELAKALRVNNSI 273

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             LHL GN I   G + + + L   K  L  L +  N I   GA  +A+ +    +L  +
Sbjct: 274 TALHLSGNGIAGPGAQEVAAALHVNKS-LQELYLAWNCIVEHGAKALADALCENTTLTTL 332

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++  N IG EGA  IA AL QN T+  + L GN +  +G   IA+ L+ N  +  LDL  
Sbjct: 333 DMGANGIGKEGASHIARALTQNTTLKVLHLHGNVLKEEGPKQIAKALQTNKFLEFLDLDG 392

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG +  K L+E +K + ++ TLKL   +I   GA  +A+ L+ N +++ LDL  N + 
Sbjct: 393 NEIGVNNIKELAESVKINCSLQTLKLARNKINDIGAWELAEALKINRSLTKLDLTRNNVE 452

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           + GA  L      +N  L  + L++N+I++ GA +IAQA+  N    + +L +A+N +  
Sbjct: 453 ETGATGLNDCLH-INNTLRELHLSYNKIKETGAMSIAQAINVN--TTLHTLLIADNDIPD 509

Query: 573 FGQSALTDA 581
            G   + +A
Sbjct: 510 AGAMKIAEA 518



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 221/464 (47%), Gaps = 41/464 (8%)

Query: 152 QTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           + +NE    L      S V M G   G  G+  +A ++  N     V  ++NG+   G  
Sbjct: 6   EMVNEMVSRLNCGEHLSEVKMPGCLIGKTGIAQVATAIQSNPHVRYVDLSSNGLNEYGAT 65

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                L+   +L++L+L  N I   G + L   +  N+ +  L LS   + D G + IA 
Sbjct: 66  QISQFLRVTNSLRSLSLDDNSIKTAGAEELSKAIETNSNLHILHLSCNRIEDAGCRMIAL 125

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L+NN+ +  L L+NN         +   L  NST+R L L+ N   A GA ALAK L+ 
Sbjct: 126 ALRNNNSIHSLYLDNNNAGDEFGKDMGVTLTMNSTLRFLDLSDNDIKATGAMALAKALQN 185

Query: 329 NKSLRELHLHGNSIGDEG----IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           N  +  +++  N+I +EG     R L++  S     L  L +  N+I+  GA  +A+ + 
Sbjct: 186 NSVVTSMNISRNNIANEGATEIARMLLTNTS-----LQQLRMSWNTINDGGAHELAKVLS 240

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
              +L   ++  N +   GA ++A AL+ N +IT + L GN I   GA  +A  L  N  
Sbjct: 241 ENSTLRLFDIADNRVSSVGATELAKALRVNNSITALHLSGNGIAGPGAQEVAAALHVNKS 300

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L LA+N I   GAKAL++ L  +  + TL +G   IG  GA  +A  L  N T+ +L
Sbjct: 301 LQELYLAWNCIVEHGAKALADALCENTTLTTLDMGANGIGKEGASHIARALTQNTTLKVL 360

Query: 505 DLRANGLRDEGAKCLAQSFKV---------------------------VNEALTSIDLAF 537
            L  N L++EG K +A++ +                            +N +L ++ LA 
Sbjct: 361 HLHGNVLKEEGPKQIAKALQTNKFLEFLDLDGNEIGVNNIKELAESVKINCSLQTLKLAR 420

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           N+I D GA+ +A+ALK N   ++T L+L  N + + G + L D 
Sbjct: 421 NKINDIGAWELAEALKINR--SLTKLDLTRNNVEETGATGLNDC 462



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 190/372 (51%), Gaps = 6/372 (1%)

Query: 157 FAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            AK L+     +S+++S  N  +EG   +A  L  N + +++  + N I   G      V
Sbjct: 179 LAKALQNNSVVTSMNISRNNIANEGATEIARMLLTNTSLQQLRMSWNTINDGGAHELAKV 238

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  L+  +++ N +   G   L   L  N  +  L LS   +   GA+ +A  L  N
Sbjct: 239 LSENSTLRLFDIADNRVSSVGATELAKALRVNNSITALHLSGNGIAGPGAQEVAAALHVN 298

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L+ L L  N I   G  +LA+AL EN+T+ +L +  N  G  GA+ +A+ L  N +L+
Sbjct: 299 KSLQELYLAWNCIVEHGAKALADALCENTTLTTLDMGANGIGKEGASHIARALTQNTTLK 358

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWI 392
            LHLHGN + +EG + +   L + K  L  LD+  N I       +AE +K NC SL  +
Sbjct: 359 VLHLHGNVLKEEGPKQIAKALQTNKF-LEFLDLDGNEIGVNNIKELAESVKINC-SLQTL 416

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L  N I D GA ++A+ALK NR++T +DL  NN+   GA+ +   L  N+ +  L L+Y
Sbjct: 417 KLARNKINDIGAWELAEALKINRSLTKLDLTRNNVEETGATGLNDCLHINNTLRELHLSY 476

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N I   GA ++++ +  +  ++TL +    I  +GA  +A+ L  N+TI  LDL  N + 
Sbjct: 477 NKIKETGAMSIAQAINVNTTLHTLLIADNDIPDAGAMKIAEALAANSTIHTLDLLGNTIS 536

Query: 513 DEGAKCLAQSFK 524
            +  + L Q  +
Sbjct: 537 KKVEELLDQIMR 548



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 150/296 (50%), Gaps = 4/296 (1%)

Query: 156 EFAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK LR   + +++ +SG      G   +A +L  N++ +E+  A N I   G KA   
Sbjct: 262 ELAKALRVNNSITALHLSGNGIAGPGAQEVAAALHVNKSLQELYLAWNCIVEHGAKALAD 321

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L  N  L TL++  N IG EG   +   L  N  ++ L L    L++EG K IA+ L+ 
Sbjct: 322 ALCENTTLTTLDMGANGIGKEGASHIARALTQNTTLKVLHLHGNVLKEEGPKQIAKALQT 381

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N  L  L+L+ N I  +    LAE++  N ++++L L  N    +GA  LA+ L+ N+SL
Sbjct: 382 NKFLEFLDLDGNEIGVNNIKELAESVKINCSLQTLKLARNKINDIGAWELAEALKINRSL 441

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            +L L  N++ + G   L   L      L  L +  N I   GA  +A+ I    +L  +
Sbjct: 442 TKLDLTRNNVEETGATGLNDCLHI-NNTLRELHLSYNKIKETGAMSIAQAINVNTTLHTL 500

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            +  NDI D GA KIA+AL  N TI T+DL GN I  K    + +++++ S   ++
Sbjct: 501 LIADNDIPDAGAMKIAEALAANSTIHTLDLLGNTISKKVEELLDQIMRNTSAYVTI 556


>gi|449278877|gb|EMC86605.1| Protein NLRC3, partial [Columba livia]
          Length = 994

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/389 (37%), Positives = 219/389 (56%), Gaps = 4/389 (1%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           +++S A N I+  G KA    L  N +L  L+L  N IG  G K L D L  N  +  L 
Sbjct: 598 QKLSLAENQISNKGAKALARSLMVNRSLTVLDLRSNSIGPTGAKALADALKKNQVLLSLN 657

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L    ++++GA  +AE L  N  L  L L  N I   G   +AEAL +N +++ L L+ N
Sbjct: 658 LQHNVIKEDGATFLAEALLTNHRLTTLHLQKNAIGAHGARKIAEALKQNCSLKELTLSSN 717

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G  G+ ALA+ L+ N SL+ L L  NSI   G+ AL  GL + KG L  L++  NSIS
Sbjct: 718 SVGDNGSVALAEALKVNHSLQSLDLQSNSISSTGVTALTLGLCANKG-LISLNLRENSIS 776

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            +G   +A  ++   +L  ++L  N + DEG + IA A+K+N+ +T++ L  N I +K A
Sbjct: 777 KEGGPAIARALRTNSTLRKLDLAANLLYDEGGKAIALAMKENQALTSLHLQWNFIQAKAA 836

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
           +A+A+ L+ NS + +LDL  N IG +G  ALS  LK +  ++ L L    +GA+GA+ +A
Sbjct: 837 TALAQALQSNSSLATLDLQENAIGDEGMAALSTALKVNTTLSDLHLQVASVGATGAQALA 896

Query: 493 DMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
           + L  N ++ ILDLR N +   GAK +A + K VN +L  ++L  N +  DGA  IA AL
Sbjct: 897 EALMVNKSLQILDLRGNSIGVVGAKAMANALK-VNRSLRRLNLQENSLGMDGAICIATAL 955

Query: 553 KANEDVAVTSLNLANNFLTKFGQSALTDA 581
           K N    +T +NL  N + + G   ++DA
Sbjct: 956 KGNH--GLTYVNLQGNRIGQSGAKMISDA 982



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 190/363 (52%), Gaps = 1/363 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ + +D+   + G  G   LA++L  NQ    ++   N I   G       L +N  L 
Sbjct: 623 RSLTVLDLRSNSIGPTGAKALADALKKNQVLLSLNLQHNVIKEDGATFLAEALLTNHRLT 682

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL+L  N IG  G + + + L  N  ++ L LSS  + D G+ A+AE LK N  L+ L+L
Sbjct: 683 TLHLQKNAIGAHGARKIAEALKQNCSLKELTLSSNSVGDNGSVALAEALKVNHSLQSLDL 742

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I  +G T+L   L  N  + SL+L  N     G  A+A+ L  N +LR+L L  N 
Sbjct: 743 QSNSISSTGVTALTLGLCANKGLISLNLRENSISKEGGPAIARALRTNSTLRKLDLAANL 802

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DEG +A+   +   +  L  L +  N I AK A  +A+ +++  SL  ++L  N IGD
Sbjct: 803 LYDEGGKAIALAMKENQA-LTSLHLQWNFIQAKAATALAQALQSNSSLATLDLQENAIGD 861

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EG   ++ ALK N T++ + L   ++ + GA A+A  L  N  +  LDL  N IG  GAK
Sbjct: 862 EGMAALSTALKVNTTLSDLHLQVASVGATGAQALAEALMVNKSLQILDLRGNSIGVVGAK 921

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           A++  LK + ++  L L    +G  GA  +A  L+ N+ ++ ++L+ N +   GAK ++ 
Sbjct: 922 AMANALKVNRSLRRLNLQENSLGMDGAICIATALKGNHGLTYVNLQGNRIGQSGAKMISD 981

Query: 522 SFK 524
           + +
Sbjct: 982 AIR 984



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 1/288 (0%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  K+  +   + +S  + GD G   LAE+L  N + + +   +N I++ G+ A    L 
Sbjct: 701 EALKQNCSLKELTLSSNSVGDNGSVALAEALKVNHSLQSLDLQSNSISSTGVTALTLGLC 760

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +N  L +LNL  N I  EG   +   L  N+ + +L L++  L DEG KAIA  +K N  
Sbjct: 761 ANKGLISLNLRENSISKEGGPAIARALRTNSTLRKLDLAANLLYDEGGKAIALAMKENQA 820

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L L  N I     T+LA+AL  NS++ +L L  N  G  G  AL+  L+ N +L +L
Sbjct: 821 LTSLHLQWNFIQAKAATALAQALQSNSSLATLDLQENAIGDEGMAALSTALKVNTTLSDL 880

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           HL   S+G  G +AL   L   K  L +LD+  NSI   GA  +A  +K  +SL  +NL 
Sbjct: 881 HLQVASVGATGAQALAEALMVNKS-LQILDLRGNSIGVVGAKAMANALKVNRSLRRLNLQ 939

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
            N +G +GA  IA ALK N  +T ++L GN I   GA  I+  ++ NS
Sbjct: 940 ENSLGMDGAICIATALKGNHGLTYVNLQGNRIGQSGAKMISDAIRTNS 987



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 161/319 (50%), Gaps = 15/319 (4%)

Query: 261 EGAKAIAELLKNNSILRVL-ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           E AKA+ E +KN S+  +L  +N + + Y     +++  +E +         N    L  
Sbjct: 507 EIAKAVEEAMKNESLAGMLTPVNCSALAY--LLQVSDVCVEET---------NLSSCLTY 555

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N     L      + L L  N   D  +  L S LS +  ++  L +  N IS KGA  +
Sbjct: 556 NVCKSLLPQLLFCQNLRLDNNQFKDNVMELLGSMLSVKDCQIQKLSLAENQISNKGAKAL 615

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A  +   +SL  ++L  N IG  GA+ +ADALK+N+ + +++L  N I   GA+ +A  L
Sbjct: 616 ARSLMVNRSLTVLDLRSNSIGPTGAKALADALKKNQVLLSLNLQHNVIKEDGATFLAEAL 675

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
             N  +T+L L  N IGA GA+ ++E LK + ++  L L    +G +G+  +A+ L+ N+
Sbjct: 676 LTNHRLTTLHLQKNAIGAHGARKIAEALKQNCSLKELTLSSNSVGDNGSVALAEALKVNH 735

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
           ++  LDL++N +   G   L       N+ L S++L  N I  +G  AIA+AL+ N    
Sbjct: 736 SLQSLDLQSNSISSTGVTALTLGL-CANKGLISLNLRENSISKEGGPAIARALRTNS--T 792

Query: 560 VTSLNLANNFLTKFGQSAL 578
           +  L+LA N L   G  A+
Sbjct: 793 LRKLDLAANLLYDEGGKAI 811


>gi|188501476|gb|ACD54608.1| leucine rich repeat containing proteins-like protein [Adineta vaga]
          Length = 1420

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 153/474 (32%), Positives = 256/474 (54%), Gaps = 22/474 (4%)

Query: 107 KLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSS 166
           ++++     KP   +  T E +++S     N   G+ G       + L +  +     + 
Sbjct: 15  EVIQNYDSQKPLNATLQTLEQLDFS-----NKQIGYKGA------EQLADAVRNSTTLTE 63

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S  + GD+G+ +LA++L +N+T   +  A N I A G        ++N  L  +NLS
Sbjct: 64  LDLSKNHIGDQGVQYLADALLHNKTIATLDLADNSIGAHGAHHLANAFRNNKTLVNINLS 123

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N +GDEG++ L D    N  +      S  + D GA+ +A+ L+NN+ +  L+L  N I
Sbjct: 124 NNQLGDEGIEYLADAFRYNTVIMDF---SNRITDYGAECLAKTLRNNTTINTLDLRWNNI 180

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   LAEAL  N+T+ +L L+ N     GA +LA  L+ N  L  L+L  N IG  G
Sbjct: 181 STKGTQQLAEALPHNTTLTNLDLSWNAIDDQGAQSLADALQNNTILETLNLASNRIGGHG 240

Query: 347 IRALMSGLSSRKGK--LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            + L+   +SR+    L   ++ +N I   G   +A+ +K  KS++ ++L  N IGD+G 
Sbjct: 241 AQQLV---ASRQNHDILTTFNLSSNHIGHDGMKLLADALKTNKSIVTLDLASNRIGDDGV 297

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + +  ALK N T+TT++L  N I + G + +++ ++D + +T +DL+YN IG  GAK L+
Sbjct: 298 QHLIVALKNNTTLTTLNLSSNQIRTSGIAYLSQAIEDTTALTVIDLSYNEIGITGAKDLA 357

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
            ++  +  I TL +   QIG+SG ++++  L+ N TI  +DL  N + DEG K LA + K
Sbjct: 358 TIILTNATITTLLVSNNQIGSSGIQYISYALQNNTTIISIDLSKNQIGDEGMKHLANALK 417

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
             N  +T+IDL+ N+I D G   +   LK N    +T+++L +N +T  G  +L
Sbjct: 418 -HNTTITTIDLSQNQITDKGIEHLGNVLKFN--TTLTNISLVSNKITDKGADSL 468



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 198/347 (57%), Gaps = 7/347 (2%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
             + N  L TL+L+ N IG EG + + +   DN  +  L L S  + DEGA+ +A+  + N
Sbjct: 1069 FRDNQTLTTLDLTFNAIGPEGAQHIANAFQDNKTLTTLLLGSNRIADEGARHLAKSFRTN 1128

Query: 274  SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
            + L  L+L  N I   G   LA+A   N+T+ +L L  N  G  GA   A     N +L 
Sbjct: 1129 TTLTTLDLTLNGIGSEGARYLADAFRHNATLTTLDLRSNSIGTEGARCFADAFRNNMTLT 1188

Query: 334  ELHLHGNSIGDEGIRALMSGLSSR----KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             L    N I +EG + L+     +    +  +    I    +     +H++  +   ++L
Sbjct: 1189 SLDFSSNKISNEGAQYLVDIFRDQTEWNRYLMHFEKIKYILLYLAYCYHMSTSV--TQTL 1246

Query: 390  LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
            + ++L  ++IGD G + +ADA++ ++TITTIDL  N+I ++G   +A VL+DN+++T LD
Sbjct: 1247 VVLDLQSDEIGDNGVQYLADAIRNHQTITTIDLSDNSIGAEGIQHLANVLRDNTMLTKLD 1306

Query: 450  LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            L++N IGA+GA+ LSE ++ +  I +L L   +IG  GA+++AD  R N T++ ++LR+N
Sbjct: 1307 LSFNLIGAEGARYLSETIRENTTITSLNLHSNEIGTEGAQYLADAFRNNKTLTTINLRSN 1366

Query: 510  GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            G+ D+GA+ L  + +  N+ LT++DL+ N I D G   +  AL+ N+
Sbjct: 1367 GIGDKGAQYLTNALQ-SNKILTNLDLSDNGIGDRGVHLLTTALRDNK 1412



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 223/474 (47%), Gaps = 62/474 (13%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSN 217
           K     +++D+S     D+G+  L   L +N T   +S  +N IT  G  +    + Q  
Sbjct: 417 KHNTTITTIDLSQNQITDKGIEHLGNVLKFNTTLTNISLVSNKITDKGADSLASSIQQHK 476

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           I +  LNL+ N IGD+G + L + L     + +L+L    +    ++ +++  ++N+ L 
Sbjct: 477 IMINELNLAHNLIGDQGARSLANYLQYQTTLTKLELIGNPITSNASRYLSDAFRHNTTLV 536

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            L L+ + ID     ++  A   NST  SL L  +  G  GA  L        +L  L+L
Sbjct: 537 SLNLSLSQIDEEERQTVTNAYRSNSTFTSLDLEHSGIGRTGAQILT-------TLSNLNL 589

Query: 338 HGNSIGDEGIRALMSGLSSRKGK----------------------------LAVLDIGNN 369
             N I  + I+ L   L  R G                             L  LD+  N
Sbjct: 590 RHNKITGKAIQHLSEAL--RTGTVNEYFSHYFSFHVSSNIDWIQNFLPPQTLTTLDLAAN 647

Query: 370 SISAKGAFHVAEYIKNCKSLLWINL-----------YMND-----------IGDEGAEKI 407
            I  +GA ++A+ I+N K++  ++L           Y+ D           IG EG + +
Sbjct: 648 GIGTEGARYLADAIRNNKTITSLDLKSNKIGSGGVRYLADTLVTLDLGSNAIGTEGIQYL 707

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            D  + N+T++ +DLG N I   GA  +A   ++N  +T+LDL  N IG +G + LS++ 
Sbjct: 708 VDVFQDNKTLSALDLGTNGIGVDGAQHLANAFRNNVTLTTLDLRGNEIGVEGVRHLSDMF 767

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
           + +  +  L L    IG  GA+++A+  R NNT++ L L +NG+R +G + L       N
Sbjct: 768 RDNKTLTILDLRSNGIGDKGAQYLAEAFRNNNTLTTLHLGSNGIRAKGIRYLLLDAFQSN 827

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           + LT +DL+ N+I  +G   +A  L+ N+   +T++NLANN +   G   + DA
Sbjct: 828 QTLTYLDLSDNKISLEGVKYLADGLRTNK--TLTNINLANNKVGVEGIQYIADA 879



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 226/432 (52%), Gaps = 8/432 (1%)

Query: 157 FAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            AK LR     +++D+   N   +G   LAE+L +N T   +  + N I   G ++    
Sbjct: 160 LAKTLRNNTTINTLDLRWNNISTKGTQQLAEALPHNTTLTNLDLSWNAIDDQGAQSLADA 219

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           LQ+N  L+TLNL+ N IG  G + L     ++  +    LSS  +  +G K +A+ LK N
Sbjct: 220 LQNNTILETLNLASNRIGGHGAQQLVASRQNHDILTTFNLSSNHIGHDGMKLLADALKTN 279

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             +  L+L +N I   G   L  AL  N+T+ +L+L+ N     G   L++ +E   +L 
Sbjct: 280 KSIVTLDLASNRIGDDGVQHLIVALKNNTTLTTLNLSSNQIRTSGIAYLSQAIEDTTALT 339

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            + L  N IG  G + L + + +    +  L + NN I + G  +++  ++N  +++ I+
Sbjct: 340 VIDLSYNEIGITGAKDLATIILT-NATITTLLVSNNQIGSSGIQYISYALQNNTTIISID 398

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IGDEG + +A+ALK N TITTIDL  N I  KG   +  VLK N+ +T++ L  N
Sbjct: 399 LSKNQIGDEGMKHLANALKHNTTITTIDLSQNQITDKGIEHLGNVLKFNTTLTNISLVSN 458

Query: 454 PIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            I   GA +L+  ++ H   IN L L    IG  GA  +A+ L+Y  T++ L+L  N + 
Sbjct: 459 KITDKGADSLASSIQQHKIMINELNLAHNLIGDQGARSLANYLQYQTTLTKLELIGNPIT 518

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
              ++ L+ +F+  N  L S++L+ ++I ++    +  A ++N     TSL+L ++ + +
Sbjct: 519 SNASRYLSDAFR-HNTTLVSLNLSLSQIDEEERQTVTNAYRSNS--TFTSLDLEHSGIGR 575

Query: 573 FGQSALTDAKDL 584
            G   LT   +L
Sbjct: 576 TGAQILTTLSNL 587



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 234/506 (46%), Gaps = 79/506 (15%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L E        +++D+S     D+G   LA++L  N   E ++ A+N I   G +   
Sbjct: 186 QQLAEALPHNTTLTNLDLSWNAIDDQGAQSLADALQNNTILETLNLASNRIGGHGAQQLV 245

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA------ 265
              Q++  L T NLS N IG +G+K L D L  N  +  L L+S  + D+G +       
Sbjct: 246 ASRQNHDILTTFNLSSNHIGHDGMKLLADALKTNKSIVTLDLASNRIGDDGVQHLIVALK 305

Query: 266 ----------------------IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
                                 +++ +++ + L V++L+ N I  +G   LA  +L N+T
Sbjct: 306 NNTTLTTLNLSSNQIRTSGIAYLSQAIEDTTALTVIDLSYNEIGITGAKDLATIILTNAT 365

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           I +L ++ N  G+ G   ++  L+ N ++  + L  N IGDEG++ L + L      +  
Sbjct: 366 ITTLLVSNNQIGSSGIQYISYALQNNTTIISIDLSKNQIGDEGMKHLANAL-KHNTTITT 424

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDL 422
           +D+  N I+ KG  H+   +K   +L  I+L  N I D+GA+ +A +++Q++  I  ++L
Sbjct: 425 IDLSQNQITDKGIEHLGNVLKFNTTLTNISLVSNKITDKGADSLASSIQQHKIMINELNL 484

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I  +GA ++A  L+  + +T L+L  NPI ++ ++ LS+  + +  + +L L   Q
Sbjct: 485 AHNLIGDQGARSLANYLQYQTTLTKLELIGNPITSNASRYLSDAFRHNTTLVSLNLSLSQ 544

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ--------------------- 521
           I     + V +  R N+T + LDL  +G+   GA+ L                       
Sbjct: 545 IDEEERQTVTNAYRSNSTFTSLDLEHSGIGRTGAQILTTLSNLNLRHNKITGKAIQHLSE 604

Query: 522 ---------------SFKVVN-----------EALTSIDLAFNEIRDDGAFAIAQALKAN 555
                          SF V +           + LT++DLA N I  +GA  +A A++ N
Sbjct: 605 ALRTGTVNEYFSHYFSFHVSSNIDWIQNFLPPQTLTTLDLAANGIGTEGARYLADAIRNN 664

Query: 556 EDVAVTSLNLANNFLTKFGQSALTDA 581
           +   +TSL+L +N +   G   L D 
Sbjct: 665 K--TITSLDLKSNKIGSGGVRYLADT 688



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 173/343 (50%), Gaps = 16/343 (4%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +++D++    G EG  +LA+++  N+T   +   +N I + G++     L       
Sbjct: 637 QTLTTLDLAANGIGTEGARYLADAIRNNKTITSLDLKSNKIGSGGVRYLADTL------V 690

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL+L  N IG EG++ L D+  DN  +  L L +  +  +GA+ +A   +NN  L  L+L
Sbjct: 691 TLDLGSNAIGTEGIQYLVDVFQDNKTLSALDLGTNGIGVDGAQHLANAFRNNVTLTTLDL 750

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G   L++   +N T+  L L  N  G  GA  LA+    N +L  LHL  N 
Sbjct: 751 RGNEIGVEGVRHLSDMFRDNKTLTILDLRSNGIGDKGAQYLAEAFRNNNTLTTLHLGSNG 810

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I  +GIR L+         L  LD+ +N IS +G  ++A+ ++  K+L  INL  N +G 
Sbjct: 811 IRAKGIRYLLLDAFQSNQTLTYLDLSDNKISLEGVKYLADGLRTNKTLTNINLANNKVGV 870

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EG + IADAL+ N T+T +DL GN +  +GA  +A  +++N V+         I  + + 
Sbjct: 871 EGIQYIADALRSNVTLTMLDLSGNKMGVEGAQHLANAIRNNEVV---------IFENSSI 921

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
              + +     +  L L   +IG  G +++ D L+ NNT+ I 
Sbjct: 922 LFIQNIVILKTLIILNLADNRIGDQGVQYLGDALQ-NNTVIIF 963



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 205/469 (43%), Gaps = 88/469 (18%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           ++  E +QT+    +    F+S+D+     G  G   L        T   ++   N IT 
Sbjct: 544 QIDEEERQTVTNAYRSNSTFTSLDLEHSGIGRTGAQILT-------TLSNLNLRHNKITG 596

Query: 205 AGIKAFDGVLQ-----------------SNI----------ALKTLNLSGNPIGDEGVKC 237
             I+     L+                 SNI           L TL+L+ N IG EG + 
Sbjct: 597 KAIQHLSEALRTGTVNEYFSHYFSFHVSSNIDWIQNFLPPQTLTTLDLAANGIGTEGARY 656

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           L D + +N  +  L L S  +   G + +A+       L  L+L +N I   G   L + 
Sbjct: 657 LADAIRNNKTITSLDLKSNKIGSGGVRYLAD------TLVTLDLGSNAIGTEGIQYLVDV 710

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
             +N T+ +L L  N  G  GA  LA     N +L  L L GN IG EG+R         
Sbjct: 711 FQDNKTLSALDLGTNGIGVDGAQHLANAFRNNVTLTTLDLRGNEIGVEGVR--------- 761

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
                               H+++  ++ K+L  ++L  N IGD+GA+ +A+A + N T+
Sbjct: 762 --------------------HLSDMFRDNKTLTILDLRSNGIGDKGAQYLAEAFRNNNTL 801

Query: 418 TTIDLGGNNIHSKGASAIA-RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           TT+ LG N I +KG   +     + N  +T LDL+ N I  +G K L++ L+ +  +  +
Sbjct: 802 TTLHLGSNGIRAKGIRYLLLDAFQSNQTLTYLDLSDNKISLEGVKYLADGLRTNKTLTNI 861

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK------------ 524
            L   ++G  G +++AD LR N T+++LDL  N +  EGA+ LA + +            
Sbjct: 862 NLANNKVGVEGIQYIADALRSNVTLTMLDLSGNKMGVEGAQHLANAIRNNEVVIFENSSI 921

Query: 525 ------VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
                 V+ + L  ++LA N I D G   +  AL+ N  +   S+ + N
Sbjct: 922 LFIQNIVILKTLIILNLADNRIGDQGVQYLGDALQNNTVIIFVSILILN 970



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 225/491 (45%), Gaps = 71/491 (14%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K  ++  ++D++    GD+G+  L  +L  N T   ++ ++N I  +GI      ++   
Sbjct: 277 KTNKSIVTLDLASNRIGDDGVQHLIVALKNNTTLTTLNLSSNQIRTSGIAYLSQAIEDTT 336

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           AL  ++LS N IG  G K L  I++ NA +  L +S+  +   G + I+  L+NN+ +  
Sbjct: 337 ALTVIDLSYNEIGITGAKDLATIILTNATITTLLVSNNQIGSSGIQYISYALQNNTTIIS 396

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           ++L+ N I   G   LA AL  N+TI ++ L+ N     G   L   L+ N +L  + L 
Sbjct: 397 IDLSKNQIGDEGMKHLANALKHNTTITTIDLSQNQITDKGIEHLGNVLKFNTTLTNISLV 456

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N I D+G  +L S +   K  +  L++ +N I  +GA  +A Y++   +L  + L  N 
Sbjct: 457 SNKITDKGADSLASSIQQHKIMINELNLAHNLIGDQGARSLANYLQYQTTLTKLELIGNP 516

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I    +  ++DA + N T+ +++L  + I  +    +    + NS  TSLDL ++ IG  
Sbjct: 517 ITSNASRYLSDAFRHNTTLVSLNLSLSQIDEEERQTVTNAYRSNSTFTSLDLEHSGIGRT 576

Query: 459 GA---------------------KALSEVLK-------------FH--GNIN-------- 474
           GA                     + LSE L+             FH   NI+        
Sbjct: 577 GAQILTTLSNLNLRHNKITGKAIQHLSEALRTGTVNEYFSHYFSFHVSSNIDWIQNFLPP 636

Query: 475 ----TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV---- 526
               TL L    IG  GA ++AD +R N TI+ LDL++N +   G + LA +   +    
Sbjct: 637 QTLTTLDLAANGIGTEGARYLADAIRNNKTITSLDLKSNKIGSGGVRYLADTLVTLDLGS 696

Query: 527 -----------------NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
                            N+ L+++DL  N I  DGA  +A A + N  V +T+L+L  N 
Sbjct: 697 NAIGTEGIQYLVDVFQDNKTLSALDLGTNGIGVDGAQHLANAFRNN--VTLTTLDLRGNE 754

Query: 570 LTKFGQSALTD 580
           +   G   L+D
Sbjct: 755 IGVEGVRHLSD 765



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 160/316 (50%), Gaps = 16/316 (5%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  +++ +      DEG   LA+S   N T   +    NGI + G +      + N  L 
Sbjct: 1101 KTLTTLLLGSNRIADEGARHLAKSFRTNTTLTTLDLTLNGIGSEGARYLADAFRHNATLT 1160

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN----NSILR 277
            TL+L  N IG EG +C  D   +N  +  L  SS  + +EGA+ + ++ ++    N  L 
Sbjct: 1161 TLDLRSNSIGTEGARCFADAFRNNMTLTSLDFSSNKISNEGAQYLVDIFRDQTEWNRYLM 1220

Query: 278  VLELNNNMIDYSGF-----TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
              E    ++ Y  +     TS+ + L+       L L  +  G  G   LA  +  ++++
Sbjct: 1221 HFEKIKYILLYLAYCYHMSTSVTQTLV------VLDLQSDEIGDNGVQYLADAIRNHQTI 1274

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
              + L  NSIG EGI+ L + L      L  LD+  N I A+GA +++E I+   ++  +
Sbjct: 1275 TTIDLSDNSIGAEGIQHLANVLRDNT-MLTKLDLSFNLIGAEGARYLSETIRENTTITSL 1333

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            NL+ N+IG EGA+ +ADA + N+T+TTI+L  N I  KGA  +   L+ N ++T+LDL+ 
Sbjct: 1334 NLHSNEIGTEGAQYLADAFRNNKTLTTINLRSNGIGDKGAQYLTNALQSNKILTNLDLSD 1393

Query: 453  NPIGADGAKALSEVLK 468
            N IG  G   L+  L+
Sbjct: 1394 NGIGDRGVHLLTTALR 1409



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 237/530 (44%), Gaps = 116/530 (21%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  + +D+S      EG+ +LA+ L  N+T   ++ A N +   GI+     L+SN+ L 
Sbjct: 828  QTLTYLDLSDNKISLEGVKYLADGLRTNKTLTNINLANNKVGVEGIQYIADALRSNVTLT 887

Query: 222  TLNLSGNPIGDEGVKCLCD-------ILVDNAGVERLQ----------LSSVDLR--DEG 262
             L+LSGN +G EG + L +       ++ +N+ +  +Q          L+  D R  D+G
Sbjct: 888  MLDLSGNKMGVEGAQHLANAIRNNEVVIFENSSILFIQNIVILKTLIILNLADNRIGDQG 947

Query: 263  AKAIAELLKNNSIL---RVLELNN-NMIDYSG--------FTSLAEALLENSTIRSLHLN 310
             + + + L+NN+++    +L LN  ++  +S         F S+   +L    ++   +N
Sbjct: 948  VQYLGDALQNNTVIIFVSILILNCLDLYSFSKSYVFFILIFHSIHIKVLTKVYLQRSDMN 1007

Query: 311  GN----YGGALGANA----------------LAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
                     AL A+                 ++K +  N  + +L L    +G E  R L
Sbjct: 1008 NKETQRVSDALRAHIQTLPAQNVPVTEVLTDVSKTIADN--MTKLCLRDLKMGPEECRHL 1065

Query: 351  MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK---- 406
             +     +  L  LD+  N+I  +GA H+A   ++ K+L  + L  N I DEGA      
Sbjct: 1066 AAAFRDNQ-TLTTLDLTFNAIGPEGAQHIANAFQDNKTLTTLLLGSNRIADEGARHLAKS 1124

Query: 407  ------------------------IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                                    +ADA + N T+TT+DL  N+I ++GA   A   ++N
Sbjct: 1125 FRTNTTLTTLDLTLNGIGSEGARYLADAFRHNATLTTLDLRSNSIGTEGARCFADAFRNN 1184

Query: 443  SVITSLDLAYNPIGADGAKALSEVLKFHGNINT------------LKLGWC--------- 481
              +TSLD + N I  +GA+ L ++ +     N             L L +C         
Sbjct: 1185 MTLTSLDFSSNKISNEGAQYLVDIFRDQTEWNRYLMHFEKIKYILLYLAYCYHMSTSVTQ 1244

Query: 482  ----------QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALT 531
                      +IG +G +++AD +R + TI+ +DL  N +  EG + LA   +  N  LT
Sbjct: 1245 TLVVLDLQSDEIGDNGVQYLADAIRNHQTITTIDLSDNSIGAEGIQHLANVLR-DNTMLT 1303

Query: 532  SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             +DL+FN I  +GA  +++ ++  E+  +TSLNL +N +   G   L DA
Sbjct: 1304 KLDLSFNLIGAEGARYLSETIR--ENTTITSLNLHSNEIGTEGAQYLADA 1351



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 161/359 (44%), Gaps = 32/359 (8%)

Query: 174  FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
             G E    LA +   NQT   +    N I   G +      Q N  L TL L  N I DE
Sbjct: 1057 MGPEECRHLAAAFRDNQTLTTLDLTFNAIGPEGAQHIANAFQDNKTLTTLLLGSNRIADE 1116

Query: 234  GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
            G + L      N  +  L L+   +  EGA+ +A+  ++N+ L  L+L +N I   G   
Sbjct: 1117 GARHLAKSFRTNTTLTTLDLTLNGIGSEGARYLADAFRHNATLTTLDLRSNSIGTEGARC 1176

Query: 294  LAEALLENSTIRSLHLNGNYGGALGANALAK----GLEGNKSLRE--------------- 334
             A+A   N T+ SL  + N     GA  L        E N+ L                 
Sbjct: 1177 FADAFRNNMTLTSLDFSSNKISNEGAQYLVDIFRDQTEWNRYLMHFEKIKYILLYLAYCY 1236

Query: 335  ------------LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
                        L L  + IGD G++ L   + + +  +  +D+ +NSI A+G  H+A  
Sbjct: 1237 HMSTSVTQTLVVLDLQSDEIGDNGVQYLADAIRNHQ-TITTIDLSDNSIGAEGIQHLANV 1295

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
            +++   L  ++L  N IG EGA  +++ +++N TIT+++L  N I ++GA  +A   ++N
Sbjct: 1296 LRDNTMLTKLDLSFNLIGAEGARYLSETIRENTTITSLNLHSNEIGTEGAQYLADAFRNN 1355

Query: 443  SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
              +T+++L  N IG  GA+ L+  L+ +  +  L L    IG  G   +   LR N  I
Sbjct: 1356 KTLTTINLRSNGIGDKGAQYLTNALQSNKILTNLDLSDNGIGDRGVHLLTTALRDNKVI 1414



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 87/171 (50%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+     GD G+ +LA+++  +QT   +  + N I A GI+    VL+ N  L  L+LS
Sbjct: 1249 LDLQSDEIGDNGVQYLADAIRNHQTITTIDLSDNSIGAEGIQHLANVLRDNTMLTKLDLS 1308

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N IG EG + L + + +N  +  L L S ++  EGA+ +A+  +NN  L  + L +N I
Sbjct: 1309 FNLIGAEGARYLSETIRENTTITSLNLHSNEIGTEGAQYLADAFRNNKTLTTINLRSNGI 1368

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
               G   L  AL  N  + +L L+ N  G  G + L   L  NK + E + 
Sbjct: 1369 GDKGAQYLTNALQSNKILTNLDLSDNGIGDRGVHLLTTALRDNKVIIEFYF 1419



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 77/153 (50%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q L +  +  +  +++D+S  + G EG+  LA  L  N    ++  + N I A G +   
Sbjct: 1262 QYLADAIRNHQTITTIDLSDNSIGAEGIQHLANVLRDNTMLTKLDLSFNLIGAEGARYLS 1321

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              ++ N  + +LNL  N IG EG + L D   +N  +  + L S  + D+GA+ +   L+
Sbjct: 1322 ETIRENTTITSLNLHSNEIGTEGAQYLADAFRNNKTLTTINLRSNGIGDKGAQYLTNALQ 1381

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
            +N IL  L+L++N I   G   L  AL +N  I
Sbjct: 1382 SNKILTNLDLSDNGIGDRGVHLLTTALRDNKVI 1414



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L    ++    + +D+S    G EG  +L+E++  N T   ++  +N I   G +
Sbjct: 1287 EGIQHLANVLRDNTMLTKLDLSFNLIGAEGARYLSETIRENTTITSLNLHSNEIGTEGAQ 1346

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                  ++N  L T+NL  N IGD+G + L + L  N  +  L LS   + D G   +  
Sbjct: 1347 YLADAFRNNKTLTTINLRSNGIGDKGAQYLTNALQSNKILTNLDLSDNGIGDRGVHLLTT 1406

Query: 269  LLKNNSIL 276
             L++N ++
Sbjct: 1407 ALRDNKVI 1414


>gi|432924330|ref|XP_004080575.1| PREDICTED: protein NLRC3-like [Oryzias latipes]
          Length = 1133

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 151/430 (35%), Positives = 222/430 (51%), Gaps = 5/430 (1%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            T+     +L   S + +   NF D+ +  L   L       +++S A N I+  G KA  
Sbjct: 696  TVKSLLPQLLYCSHLRLENNNFKDDVMELLGSLLSAKDCHIQKLSLADNAISNKGAKALS 755

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N  L  LNL  N IG +G K L + L  N  +  +   +  + +EGA+A+AE+L+
Sbjct: 756  RALLVNRTLTYLNLRNNNIGSKGAKFLAEALKMNQVLTSINFQNNSIEEEGAQALAEVLQ 815

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L +  N I   G   +A+AL  N T+  L L  N  G  G  ALA+ L+ N++
Sbjct: 816  CNRKLVSLNVRKNKIGADGAKRIADALKMNQTLTKLILCSNQLGDKGTVALAEALKLNQT 875

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L L  NSI + G+ AL   L    G L  L++  NSI  +GA ++A+ +K   SL  
Sbjct: 876  LLSLQLQSNSISNRGMTALTKALRFNHG-LVTLNLRENSIGIEGAKNMAQALKENNSLQN 934

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            ++L  N + DEG + I+ A+K N+ +T++ L  N I S     +A  L  N+ I  LDL 
Sbjct: 935  LDLTANLLHDEGVQAISAAIKFNQGLTSLHLQWNFIKSTATKVLANALMSNATIKLLDLQ 994

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             N IG +G   L+E LK + ++ TL L     G SGA  +A+ L  N ++  LDLR N +
Sbjct: 995  ENAIGNEGVIFLAEALKVNTSLQTLCLQGVSAGTSGAVALAEALMENQSLQTLDLRGNSI 1054

Query: 512  RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
              EGAK LA + K  N +L S++L  N +  DGA  IA ALK N  +A   +NL  N + 
Sbjct: 1055 GMEGAKALANALK-CNRSLKSLNLQENSLGMDGAIFIATALKGNHQLAY--INLQGNGIG 1111

Query: 572  KFGQSALTDA 581
            + G   ++DA
Sbjct: 1112 ESGAKVISDA 1121



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/363 (34%), Positives = 203/363 (55%), Gaps = 1/363 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  + +++   N G +G  FLAE+L  NQ    ++F  N I   G +A   VLQ N  L 
Sbjct: 762  RTLTYLNLRNNNIGSKGAKFLAEALKMNQVLTSINFQNNSIEEEGAQALAEVLQCNRKLV 821

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            +LN+  N IG +G K + D L  N  + +L L S  L D+G  A+AE LK N  L  L+L
Sbjct: 822  SLNVRKNKIGADGAKRIADALKMNQTLTKLILCSNQLGDKGTVALAEALKLNQTLLSLQL 881

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I   G T+L +AL  N  + +L+L  N  G  GA  +A+ L+ N SL+ L L  N 
Sbjct: 882  QSNSISNRGMTALTKALRFNHGLVTLNLRENSIGIEGAKNMAQALKENNSLQNLDLTANL 941

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + DEG++A+ + +   +G L  L +  N I +     +A  + +  ++  ++L  N IG+
Sbjct: 942  LHDEGVQAISAAIKFNQG-LTSLHLQWNFIKSTATKVLANALMSNATIKLLDLQENAIGN 1000

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EG   +A+ALK N ++ T+ L G +  + GA A+A  L +N  + +LDL  N IG +GAK
Sbjct: 1001 EGVIFLAEALKVNTSLQTLCLQGVSAGTSGAVALAEALMENQSLQTLDLRGNSIGMEGAK 1060

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++ +L L    +G  GA F+A  L+ N+ ++ ++L+ NG+ + GAK ++ 
Sbjct: 1061 ALANALKCNRSLKSLNLQENSLGMDGAIFIATALKGNHQLAYINLQGNGIGESGAKVISD 1120

Query: 522  SFK 524
            + +
Sbjct: 1121 AIR 1123



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/289 (35%), Positives = 149/289 (51%), Gaps = 1/289 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  + + +     GD+G   LAE+L  NQT   +   +N I+  G+ A    L+ N  L 
Sbjct: 846  QTLTKLILCSNQLGDKGTVALAEALKLNQTLLSLQLQSNSISNRGMTALTKALRFNHGLV 905

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TLNL  N IG EG K +   L +N  ++ L L++  L DEG +AI+  +K N  L  L L
Sbjct: 906  TLNLRENSIGIEGAKNMAQALKENNSLQNLDLTANLLHDEGVQAISAAIKFNQGLTSLHL 965

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I  +    LA AL+ N+TI+ L L  N  G  G   LA+ L+ N SL+ L L G S
Sbjct: 966  QWNFIKSTATKVLANALMSNATIKLLDLQENAIGNEGVIFLAEALKVNTSLQTLCLQGVS 1025

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
             G  G  AL   L   +  L  LD+  NSI  +GA  +A  +K  +SL  +NL  N +G 
Sbjct: 1026 AGTSGAVALAEALMENQS-LQTLDLRGNSIGMEGAKALANALKCNRSLKSLNLQENSLGM 1084

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +GA  IA ALK N  +  I+L GN I   GA  I+  ++  ++   +D+
Sbjct: 1085 DGAIFIATALKGNHQLAYINLQGNGIGESGAKVISDAIRATALSCVVDI 1133



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 152/270 (56%), Gaps = 3/270 (1%)

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N  G+L  + +   L        L L  N+  D+ +  L S LS++   +  L + +N+I
Sbjct: 687 NLTGSLNYSTVKSLLPQLLYCSHLRLENNNFKDDVMELLGSLLSAKDCHIQKLSLADNAI 746

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           S KGA  ++  +   ++L ++NL  N+IG +GA+ +A+ALK N+ +T+I+   N+I  +G
Sbjct: 747 SNKGAKALSRALLVNRTLTYLNLRNNNIGSKGAKFLAEALKMNQVLTSINFQNNSIEEEG 806

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A A+A VL+ N  + SL++  N IGADGAK +++ LK +  +  L L   Q+G  G   +
Sbjct: 807 AQALAEVLQCNRKLVSLNVRKNKIGADGAKRIADALKMNQTLTKLILCSNQLGDKGTVAL 866

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
           A+ L+ N T+  L L++N + + G   L ++ +  N  L +++L  N I  +GA  +AQA
Sbjct: 867 AEALKLNQTLLSLQLQSNSISNRGMTALTKALR-FNHGLVTLNLRENSIGIEGAKNMAQA 925

Query: 552 LKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           LK N   ++ +L+L  N L   G  A++ A
Sbjct: 926 LKENN--SLQNLDLTANLLHDEGVQAISAA 953



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  + + +  KE  +  ++D++     DEG+  ++ ++ +NQ    +    N I +   K
Sbjct: 917  EGAKNMAQALKENNSLQNLDLTANLLHDEGVQAISAAIKFNQGLTSLHLQWNFIKSTATK 976

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                 L SN  +K L+L  N IG+EGV  L + L  N  ++ L L  V     GA A+AE
Sbjct: 977  VLANALMSNATIKLLDLQENAIGNEGVIFLAEALKVNTSLQTLCLQGVSAGTSGAVALAE 1036

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L+ L+L  N I   G  +LA AL  N +++SL+L  N  G  GA  +A  L+G
Sbjct: 1037 ALMENQSLQTLDLRGNSIGMEGAKALANALKCNRSLKSLNLQENSLGMDGAIFIATALKG 1096

Query: 329  NKSLRELHLHGNSIGDEGIRAL 350
            N  L  ++L GN IG+ G + +
Sbjct: 1097 NHQLAYINLQGNGIGESGAKVI 1118


>gi|327286098|ref|XP_003227768.1| PREDICTED: protein NLRC3-like [Anolis carolinensis]
          Length = 1002

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 147/410 (35%), Positives = 219/410 (53%), Gaps = 5/410 (1%)

Query: 173 NFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
            F D  +  L   L G +   +++S A N I   G KA    L  N +L  L+L  N IG
Sbjct: 585 QFKDNAMDLLGSILSGKDCQIQKISLAENQIGNKGAKALARSLMVNRSLVALDLRSNSIG 644

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
            +G K + D L  N  +  L L +  ++++GAK++AE L NN  L  L+L  N I   G 
Sbjct: 645 PKGAKAIADALKINQSLLSLNLENNTMKEDGAKSLAEALVNNHTLMTLQLQKNSIGPQGS 704

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             +AEAL +N +++ L L+ N  G +GA AL +GL+ N SL  L L  NSI D G  AL 
Sbjct: 705 KKIAEALKKNWSLKELLLSSNCVGDVGAVALGEGLKINHSLLTLDLQSNSISDAGATALT 764

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L S +G L  L +  NSIS +GA  +   ++  + L  ++L  N + DEG + IA AL
Sbjct: 765 RALCSNQG-LTRLSLRENSISPEGAREIGIALQANRCLGNLDLAANLLHDEGVQAIALAL 823

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           K N+T+ ++ L  N I S  A  +++ L+ N+ +  LDL  N IG +G  AL+  L+ + 
Sbjct: 824 KANQTLASLHLQWNFIQSNAAKTLSQALQFNNSLEVLDLQENAIGDEGIVALALALRVNS 883

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALT 531
            +  L L    IG  GA  + + L  N ++++LDLR N +   GAK +A + K VN  L 
Sbjct: 884 TLTALYLQATLIGERGAVALGEALSVNKSLAVLDLRGNAIGLAGAKAMAGALK-VNGTLR 942

Query: 532 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            ++L  N +  DGA  IA AL  +   ++T +NL  N + + G   +TDA
Sbjct: 943 RLNLQENLLGMDGAICIATALTRSH--SLTYINLQGNRIGESGAKVITDA 990



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 154/302 (50%), Gaps = 1/302 (0%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++ +   + G +G   +AE+L  N + +E+  ++N +   G  A    L+ N +L TL+L
Sbjct: 691 TLQLQKNSIGPQGSKKIAEALKKNWSLKELLLSSNCVGDVGAVALGEGLKINHSLLTLDL 750

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             N I D G   L   L  N G+ RL L    +  EGA+ I   L+ N  L  L+L  N+
Sbjct: 751 QSNSISDAGATALTRALCSNQGLTRLSLRENSISPEGAREIGIALQANRCLGNLDLAANL 810

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +   G  ++A AL  N T+ SLHL  N+  +  A  L++ L+ N SL  L L  N+IGDE
Sbjct: 811 LHDEGVQAIALALKANQTLASLHLQWNFIQSNAAKTLSQALQFNNSLEVLDLQENAIGDE 870

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           GI AL   L      L  L +    I  +GA  + E +   KSL  ++L  N IG  GA+
Sbjct: 871 GIVALALALRV-NSTLTALYLQATLIGERGAVALGEALSVNKSLAVLDLRGNAIGLAGAK 929

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A ALK N T+  ++L  N +   GA  IA  L  +  +T ++L  N IG  GAK +++
Sbjct: 930 AMAGALKVNGTLRRLNLQENLLGMDGAICIATALTRSHSLTYINLQGNRIGESGAKVITD 989

Query: 466 VL 467
            +
Sbjct: 990 AI 991



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 1/337 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++  S+++      ++G   LAE+L  N T   +    N I   G K     L+ N +LK
Sbjct: 659 QSLLSLNLENNTMKEDGAKSLAEALVNNHTLMTLQLQKNSIGPQGSKKIAEALKKNWSLK 718

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L LS N +GD G   L + L  N  +  L L S  + D GA A+   L +N  L  L L
Sbjct: 719 ELLLSSNCVGDVGAVALGEGLKINHSLLTLDLQSNSISDAGATALTRALCSNQGLTRLSL 778

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G   +  AL  N  + +L L  N     G  A+A  L+ N++L  LHL  N 
Sbjct: 779 RENSISPEGAREIGIALQANRCLGNLDLAANLLHDEGVQAIALALKANQTLASLHLQWNF 838

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I     + L   L      L VLD+  N+I  +G   +A  ++   +L  + L    IG+
Sbjct: 839 IQSNAAKTLSQALQF-NNSLEVLDLQENAIGDEGIVALALALRVNSTLTALYLQATLIGE 897

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA  + +AL  N+++  +DL GN I   GA A+A  LK N  +  L+L  N +G DGA 
Sbjct: 898 RGAVALGEALSVNKSLAVLDLRGNAIGLAGAKAMAGALKVNGTLRRLNLQENLLGMDGAI 957

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            ++  L    ++  + L   +IG SGA+ + D +  N
Sbjct: 958 CIATALTRSHSLTYINLQGNRIGESGAKVITDAICTN 994



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 133/244 (54%), Gaps = 3/244 (1%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N   D  +  L S LS +  ++  + +  N I  KGA  +A  +   +SL+ ++L
Sbjct: 579 LRLDYNQFKDNAMDLLGSILSGKDCQIQKISLAENQIGNKGAKALARSLMVNRSLVALDL 638

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N IG +GA+ IADALK N+++ +++L  N +   GA ++A  L +N  + +L L  N 
Sbjct: 639 RSNSIGPKGAKAIADALKINQSLLSLNLENNTMKEDGAKSLAEALVNNHTLMTLQLQKNS 698

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  G+K ++E LK + ++  L L    +G  GA  + + L+ N+++  LDL++N + D 
Sbjct: 699 IGPQGSKKIAEALKKNWSLKELLLSSNCVGDVGAVALGEGLKINHSLLTLDLQSNSISDA 758

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           GA  L ++    N+ LT + L  N I  +GA  I  AL+AN    + +L+LA N L   G
Sbjct: 759 GATALTRAL-CSNQGLTRLSLRENSISPEGAREIGIALQANR--CLGNLDLAANLLHDEG 815

Query: 575 QSAL 578
             A+
Sbjct: 816 VQAI 819



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 67/151 (44%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +TL++  +   +   +D+     GDEG+  LA +L  N T   +   A  I   G  A  
Sbjct: 845 KTLSQALQFNNSLEVLDLQENAIGDEGIVALALALRVNSTLTALYLQATLIGERGAVALG 904

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  N +L  L+L GN IG  G K +   L  N  + RL L    L  +GA  IA  L 
Sbjct: 905 EALSVNKSLAVLDLRGNAIGLAGAKAMAGALKVNGTLRRLNLQENLLGMDGAICIATALT 964

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            +  L  + L  N I  SG   + +A+  N+
Sbjct: 965 RSHSLTYINLQGNRIGESGAKVITDAICTNA 995


>gi|441659579|ref|XP_003269125.2| PREDICTED: protein NLRC3 [Nomascus leucogenys]
          Length = 1136

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/362 (38%), Positives = 202/362 (55%), Gaps = 4/362 (1%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 767  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTSL 826

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L  N +   G  S+AEAL    T+  LHL  N  G +GA  +A  L+ N+SL+EL L  
Sbjct: 827  SLQGNTVRDDGARSVAEALASTRTLSMLHLQKNSIGPMGAQQMADALKQNRSLKELMLSS 886

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSIGD G +AL   L   +G L  LD+ +NSIS  G   +   +   ++LL ++L  N +
Sbjct: 887  NSIGDGGAKALAEALKVNQG-LESLDLQSNSISDAGVAALMGALCTNQTLLSLSLTANLL 945

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSLDL  N IG DG
Sbjct: 946  HDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDG 1005

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
            A A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR N +   GAK L
Sbjct: 1006 ACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAKAL 1065

Query: 520  AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
            A + K VN +L  ++L  N +  DGA  IA AL  N    +  +NL  N +   G   ++
Sbjct: 1066 ANALK-VNSSLRRLNLQENSLGMDGAICIATALSGNHR--LQHINLQGNHVGDSGARMIS 1122

Query: 580  DA 581
            +A
Sbjct: 1123 EA 1124



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 164/345 (47%), Gaps = 29/345 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ + G    D+G   +AE+L   +T   +    N I   G +     L+ N +LK
Sbjct: 821  RTLTSLSLQGNTVRDDGARSVAEALASTRTLSMLHLQKNSIGPMGAQQMADALKQNRSLK 880

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L LS N IGD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 881  ELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSL 940

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N++   G  ++A A+ EN T+ SLHL  N+  A  A AL + L+ N+SL  L L  N+
Sbjct: 941  TANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENA 1000

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            IGD+                             GA  VA  +K   +L  + L +  IG 
Sbjct: 1001 IGDD-----------------------------GACAVARALKVNTALTALYLQVASIGA 1031

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GA+ + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 1032 PGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAI 1091

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             ++  L  +  +  + L    +G SGA  +++ ++ N     +++
Sbjct: 1092 CIATALSGNHRLQHINLQGNHVGDSGARMISEAIKTNAPTCTVEM 1136



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 131/238 (55%), Gaps = 3/238 (1%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R+L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 739 RKLMLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 798

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+T++ L GN +   GA ++A  L     ++ L L  
Sbjct: 799 DLRSNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSVAEALASTRTLSMLHLQK 858

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+ +++ LK + ++  L L    IG  GA+ +A+ L+ N  +  LDL++N + 
Sbjct: 859 NSIGPMGAQQMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSIS 918

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           D G   L  +    N+ L S+ L  N + D GA AIA A++ N    +TSL+L  NF+
Sbjct: 919 DAGVAALMGAL-CTNQTLLSLSLTANLLHDQGARAIAVAVRENR--TLTSLHLQWNFI 973


>gi|183178960|gb|ACC43968.1| FBox-LRR protein [Philodina roseola]
          Length = 594

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/391 (35%), Positives = 213/391 (54%), Gaps = 3/391 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  +S+D+     G+EG+ +LA++L  NQT   +   AN I   G K     L+ N  L 
Sbjct: 191 RTLTSLDLGLNEQGNEGVKYLADALKVNQTLMTLDLYANRIDREGAKYLADSLKVNSVLS 250

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL L  N IG EG+K L D L  N  +  L L S  L DEG K +A+ LK N  L  L L
Sbjct: 251 TLKLYSNSIGAEGMKYLADALKTNRALATLTLGSNKLGDEGVKYLADALKCNQTLNTLVL 310

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N +       L++AL+ N T+ +L LNGN  G  GA  LA  L  N++L+ L L+   
Sbjct: 311 YQNNLGAEAAKYLSDALMSNQTLTNLELNGNMLGNEGAKHLADALVNNRTLKTLKLNEIR 370

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +  EG++ L   L S +G L  L++G N +S + A ++++ +K  ++L  ++L  + IG 
Sbjct: 371 LRAEGMKYLAVSLMSNQG-LTRLEVGRNHLSPEAAKYLSDALKINQTLDTLHLDFSSIGV 429

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA+ +++ALK N+T+ T+ L  +++  +     A  LK N  + SLDL  N  G +GAK
Sbjct: 430 EGAKDLSNALKVNQTLHTLILHNSHLGVEEMKYFADALKTNQTLRSLDLNDNKAGVEGAK 489

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            L+E L  + N+ +L+L    IG  GA + A+ L+ N T+ IL+L  N L + G K LA 
Sbjct: 490 YLAEALIKNKNLTSLELKMNDIGVEGARYFANALKINQTLHILNLYGNHL-NAGIKYLAD 548

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
           + + VN+ L ++ L  N   D+    +A  L
Sbjct: 549 ALR-VNQTLNTLTLYSNYPSDETVRYLANVL 578



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 150/476 (31%), Positives = 233/476 (48%), Gaps = 61/476 (12%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  +++ +     G +G  +LA+SL  N T  ++    N   A G K     L+ N  LK
Sbjct: 79  RTLTTLGLGLVTLGAQGAKYLADSLKINSTLNKLRLNHNDFGAEGTKYLFNALKINQTLK 138

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQL-----------------------SSVDL 258
           T+ LS N +  +  +CL D+L+ N  +  L+L                       +S+DL
Sbjct: 139 TIRLSENHVNADAAQCLADVLLSNQTLNTLELYYCYLNATVFKYLATALKVNRTLTSLDL 198

Query: 259 R-----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
                 +EG K +A+ LK N  L  L+L  N ID  G   LA++L  NS + +L L  N 
Sbjct: 199 GLNEQGNEGVKYLADALKVNQTLMTLDLYANRIDREGAKYLADSLKVNSVLSTLKLYSNS 258

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            GA G   LA  L+ N++L  L L  N +GDEG++ L   L   +  L  L +  N++ A
Sbjct: 259 IGAEGMKYLADALKTNRALATLTLGSNKLGDEGVKYLADALKCNQ-TLNTLVLYQNNLGA 317

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL----------- 422
           + A ++++ + + ++L  + L  N +G+EGA+ +ADAL  NRT+ T+ L           
Sbjct: 318 EAAKYLSDALMSNQTLTNLELNGNMLGNEGAKHLADALVNNRTLKTLKLNEIRLRAEGMK 377

Query: 423 -----------------GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
                            G N++  + A  ++  LK N  + +L L ++ IG +GAK LS 
Sbjct: 378 YLAVSLMSNQGLTRLEVGRNHLSPEAAKYLSDALKINQTLDTLHLDFSSIGVEGAKDLSN 437

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            LK +  ++TL L    +G    ++ AD L+ N T+  LDL  N    EGAK LA++  +
Sbjct: 438 ALKVNQTLHTLILHNSHLGVEEMKYFADALKTNQTLRSLDLNDNKAGVEGAKYLAEAL-I 496

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            N+ LTS++L  N+I  +GA   A ALK N+ + +  LNL  N L   G   L DA
Sbjct: 497 KNKNLTSLELKMNDIGVEGARYFANALKINQTLHI--LNLYGNHLNA-GIKYLADA 549



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/353 (34%), Positives = 185/353 (52%), Gaps = 2/353 (0%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L TL L    +G +G K L D L  N+ + +L+L+  D   EG K +   LK N
Sbjct: 75  LKNNRTLTTLGLGLVTLGAQGAKYLADSLKINSTLNKLRLNHNDFGAEGTKYLFNALKIN 134

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L+ + L+ N ++      LA+ LL N T+ +L L   Y  A     LA  L+ N++L 
Sbjct: 135 QTLKTIRLSENHVNADAAQCLADVLLSNQTLNTLELYYCYLNATVFKYLATALKVNRTLT 194

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L  N  G+EG++ L   L   +  L  LD+  N I  +GA ++A+ +K    L  + 
Sbjct: 195 SLDLGLNEQGNEGVKYLADALKVNQ-TLMTLDLYANRIDREGAKYLADSLKVNSVLSTLK 253

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           LY N IG EG + +ADALK NR + T+ LG N +  +G   +A  LK N  + +L L  N
Sbjct: 254 LYSNSIGAEGMKYLADALKTNRALATLTLGSNKLGDEGVKYLADALKCNQTLNTLVLYQN 313

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +GA+ AK LS+ L  +  +  L+L    +G  GA+ +AD L  N T+  L L    LR 
Sbjct: 314 NLGAEAAKYLSDALMSNQTLTNLELNGNMLGNEGAKHLADALVNNRTLKTLKLNEIRLRA 373

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
           EG K LA S  + N+ LT +++  N +  + A  ++ ALK N+ +    L+ +
Sbjct: 374 EGMKYLAVSL-MSNQGLTRLEVGRNHLSPEAAKYLSDALKINQTLDTLHLDFS 425



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 189/364 (51%), Gaps = 7/364 (1%)

Query: 109 VEKLLMPKPSRPSKPTAEGMNW-----SVGAGTNLLSGFTGKLFRESKQTLNEFAKELRA 163
           V + LM      ++   EG  +      V +  + L  ++  +  E  + L +  K  RA
Sbjct: 217 VNQTLMTLDLYANRIDREGAKYLADSLKVNSVLSTLKLYSNSIGAEGMKYLADALKTNRA 276

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++ +     GDEG+ +LA++L  NQT   +    N + A   K     L SN  L  L
Sbjct: 277 LATLTLGSNKLGDEGVKYLADALKCNQTLNTLVLYQNNLGAEAAKYLSDALMSNQTLTNL 336

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L+GN +G+EG K L D LV+N  ++ L+L+ + LR EG K +A  L +N  L  LE+  
Sbjct: 337 ELNGNMLGNEGAKHLADALVNNRTLKTLKLNEIRLRAEGMKYLAVSLMSNQGLTRLEVGR 396

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +       L++AL  N T+ +LHL+ +  G  GA  L+  L+ N++L  L LH + +G
Sbjct: 397 NHLSPEAAKYLSDALKINQTLDTLHLDFSSIGVEGAKDLSNALKVNQTLHTLILHNSHLG 456

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            E ++     L + +  L  LD+ +N    +GA ++AE +   K+L  + L MNDIG EG
Sbjct: 457 VEEMKYFADALKTNQ-TLRSLDLNDNKAGVEGAKYLAEALIKNKNLTSLELKMNDIGVEG 515

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A   A+ALK N+T+  ++L GN++++ G   +A  L+ N  + +L L  N    +  + L
Sbjct: 516 ARYFANALKINQTLHILNLYGNHLNA-GIKYLADALRVNQTLNTLTLYSNYPSDETVRYL 574

Query: 464 SEVL 467
           + VL
Sbjct: 575 ANVL 578



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 192/362 (53%), Gaps = 4/362 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L+L    I  +    L D L +N  +  L L  V L  +GAK +A+ LK NS L  L
Sbjct: 53  LNNLDLQFYEISSQAALNLVDALKNNRTLTTLGLGLVTLGAQGAKYLADSLKINSTLNKL 112

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            LN+N     G   L  AL  N T++++ L+ N+  A  A  LA  L  N++L  L L+ 
Sbjct: 113 RLNHNDFGAEGTKYLFNALKINQTLKTIRLSENHVNADAAQCLADVLLSNQTLNTLELYY 172

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
             +     + L + L   +  L  LD+G N    +G  ++A+ +K  ++L+ ++LY N I
Sbjct: 173 CYLNATVFKYLATALKVNR-TLTSLDLGLNEQGNEGVKYLADALKVNQTLMTLDLYANRI 231

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             EGA+ +AD+LK N  ++T+ L  N+I ++G   +A  LK N  + +L L  N +G +G
Sbjct: 232 DREGAKYLADSLKVNSVLSTLKLYSNSIGAEGMKYLADALKTNRALATLTLGSNKLGDEG 291

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
            K L++ LK +  +NTL L    +GA  A++++D L  N T++ L+L  N L +EGAK L
Sbjct: 292 VKYLADALKCNQTLNTLVLYQNNLGAEAAKYLSDALMSNQTLTNLELNGNMLGNEGAKHL 351

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
           A +  V N  L ++ L    +R +G   +A +L +N+   +T L +  N L+      L+
Sbjct: 352 ADAL-VNNRTLKTLKLNEIRLRAEGMKYLAVSLMSNQ--GLTRLEVGRNHLSPEAAKYLS 408

Query: 580 DA 581
           DA
Sbjct: 409 DA 410



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 184/354 (51%), Gaps = 2/354 (0%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           +  ++ RE  + L +  K     S++ +   + G EG+ +LA++L  N+    ++  +N 
Sbjct: 227 YANRIDREGAKYLADSLKVNSVLSTLKLYSNSIGAEGMKYLADALKTNRALATLTLGSNK 286

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +   G+K     L+ N  L TL L  N +G E  K L D L+ N  +  L+L+   L +E
Sbjct: 287 LGDEGVKYLADALKCNQTLNTLVLYQNNLGAEAAKYLSDALMSNQTLTNLELNGNMLGNE 346

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GAK +A+ L NN  L+ L+LN   +   G   LA +L+ N  +  L +  N+     A  
Sbjct: 347 GAKHLADALVNNRTLKTLKLNEIRLRAEGMKYLAVSLMSNQGLTRLEVGRNHLSPEAAKY 406

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           L+  L+ N++L  LHL  +SIG EG + L + L   +  L  L + N+ +  +   + A+
Sbjct: 407 LSDALKINQTLDTLHLDFSSIGVEGAKDLSNALKVNQ-TLHTLILHNSHLGVEEMKYFAD 465

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K  ++L  ++L  N  G EGA+ +A+AL +N+ +T+++L  N+I  +GA   A  LK 
Sbjct: 466 ALKTNQTLRSLDLNDNKAGVEGAKYLAEALIKNKNLTSLELKMNDIGVEGARYFANALKI 525

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           N  +  L+L  N + A G K L++ L+ +  +NTL L           ++A++L
Sbjct: 526 NQTLHILNLYGNHLNA-GIKYLADALRVNQTLNTLTLYSNYPSDETVRYLANVL 578



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 140/262 (53%), Gaps = 4/262 (1%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N++    +  ++L  L L    I  +    L+  L + +  L  L +G  ++ A+GA ++
Sbjct: 41  NSIIDTYQPYQTLNNLDLQFYEISSQAALNLVDALKNNR-TLTTLGLGLVTLGAQGAKYL 99

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A+ +K   +L  + L  ND G EG + + +ALK N+T+ TI L  N++++  A  +A VL
Sbjct: 100 ADSLKINSTLNKLRLNHNDFGAEGTKYLFNALKINQTLKTIRLSENHVNADAAQCLADVL 159

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
             N  + +L+L Y  + A   K L+  LK +  + +L LG  + G  G +++AD L+ N 
Sbjct: 160 LSNQTLNTLELYYCYLNATVFKYLATALKVNRTLTSLDLGLNEQGNEGVKYLADALKVNQ 219

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
           T+  LDL AN +  EGAK LA S K VN  L+++ L  N I  +G   +A ALK N   A
Sbjct: 220 TLMTLDLYANRIDREGAKYLADSLK-VNSVLSTLKLYSNSIGAEGMKYLADALKTNR--A 276

Query: 560 VTSLNLANNFLTKFGQSALTDA 581
           + +L L +N L   G   L DA
Sbjct: 277 LATLTLGSNKLGDEGVKYLADA 298



 Score = 43.5 bits (101), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +S+++   + G EG  + A +L  NQT   ++   N + A GIK     L+ N  L 
Sbjct: 499 KNLTSLELKMNDIGVEGARYFANALKINQTLHILNLYGNHLNA-GIKYLADALRVNQTLN 557

Query: 222 TLNLSGNPIGDEGVKCLCDILVD 244
           TL L  N   DE V+ L ++L D
Sbjct: 558 TLTLYSNYPSDETVRYLANVLSD 580


>gi|46445898|ref|YP_007263.1| hypothetical protein pc0264 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46399539|emb|CAF22988.1| hypothetical protein pc0264 [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1805

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 141/420 (33%), Positives = 215/420 (51%), Gaps = 5/420 (1%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F+SV++S +   D G   LA SL  N T + +    N I+  G +A    L SN AL+TL
Sbjct: 1342 FASVNLSNQKISDRGAEVLAHSLASNTTLKSLDLDRNQISDKGAEAIAQALASNAALETL 1401

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
             L+GN I D+G + +   L  NA + +L L+   + D+G +A A+ L +N+IL  L LN 
Sbjct: 1402 WLNGNQISDKGAEAIAQSLASNAALWKLSLNGNQISDQGMEAFAQALASNTILMDLSLNG 1461

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            N I   G  + A+AL  N++IR L LN N        A A+ L  N S+  L L+GN I 
Sbjct: 1462 NQISDQGMKAFAQALASNTSIRVLSLNENQISDKEMEAFAQALASNTSIGVLSLNGNQIS 1521

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D+G+ A    L+S    L  L + NN IS KG    A+ + +  S+  ++L  N I D+G
Sbjct: 1522 DKGMEAFAQALAS-NTTLRTLRLDNNQISDKGMEAFAQALASNTSIGVLSLNGNQISDKG 1580

Query: 404  AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
               +A AL  N  ++ + L  N I  +G  A A+ L  N+ + +L L  N I   G +A 
Sbjct: 1581 IVALAQALASNTILSELSLNENQISDQGMEAFAQALASNTALRALRLDNNQISDKGMEAF 1640

Query: 464  SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
            ++ L  +  ++ L L   QI   G E  A  L  N T+  L L  N + D+G +  AQ+ 
Sbjct: 1641 AQALASNTILSELSLNGNQISDQGMEAFAQALASNITLRALRLDNNQISDQGMEAFAQTL 1700

Query: 524  KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN---LANNFLTKFGQSALTD 580
               N  L ++ L  N+I D G  A AQ + +N  + V SLN   +++  +  F Q+ +++
Sbjct: 1701 -ASNTTLRALRLDNNQISDKGMEAFAQTMASNTSIRVLSLNGNQISDQGMKAFAQTLVSN 1759



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 202/402 (50%), Gaps = 2/402 (0%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A  ++ ++G    D+G   +A+SL  N    ++S   N I+  G++AF   L SN  L  
Sbjct: 1397 ALETLWLNGNQISDKGAEAIAQSLASNAALWKLSLNGNQISDQGMEAFAQALASNTILMD 1456

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L+L+GN I D+G+K     L  N  +  L L+   + D+  +A A+ L +N+ + VL LN
Sbjct: 1457 LSLNGNQISDQGMKAFAQALASNTSIRVLSLNENQISDKEMEAFAQALASNTSIGVLSLN 1516

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
             N I   G  + A+AL  N+T+R+L L+ N     G  A A+ L  N S+  L L+GN I
Sbjct: 1517 GNQISDKGMEAFAQALASNTTLRTLRLDNNQISDKGMEAFAQALASNTSIGVLSLNGNQI 1576

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
             D+GI AL   L+S    L+ L +  N IS +G    A+ + +  +L  + L  N I D+
Sbjct: 1577 SDKGIVALAQALAS-NTILSELSLNENQISDQGMEAFAQALASNTALRALRLDNNQISDK 1635

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            G E  A AL  N  ++ + L GN I  +G  A A+ L  N  + +L L  N I   G +A
Sbjct: 1636 GMEAFAQALASNTILSELSLNGNQISDQGMEAFAQALASNITLRALRLDNNQISDQGMEA 1695

Query: 463  LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
             ++ L  +  +  L+L   QI   G E  A  +  N +I +L L  N + D+G K  AQ+
Sbjct: 1696 FAQTLASNTTLRALRLDNNQISDKGMEAFAQTMASNTSIRVLSLNGNQISDQGMKAFAQT 1755

Query: 523  FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
              V N  L  + L  N+I D    A AQ L +N  V    LN
Sbjct: 1756 L-VSNTILMDLSLNGNQISDKRMKAFAQTLASNTAVGWFRLN 1796



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 173/333 (51%), Gaps = 4/333 (1%)

Query: 232  DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
            D G+  L  + +++     + LS+  + D GA+ +A  L +N+ L+ L+L+ N I   G 
Sbjct: 1328 DSGI--LLQLYMNDPKFASVNLSNQKISDRGAEVLAHSLASNTTLKSLDLDRNQISDKGA 1385

Query: 292  TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             ++A+AL  N+ + +L LNGN     GA A+A+ L  N +L +L L+GN I D+G+ A  
Sbjct: 1386 EAIAQALASNAALETLWLNGNQISDKGAEAIAQSLASNAALWKLSLNGNQISDQGMEAFA 1445

Query: 352  SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
              L+S    L  L +  N IS +G    A+ + +  S+  ++L  N I D+  E  A AL
Sbjct: 1446 QALAS-NTILMDLSLNGNQISDQGMKAFAQALASNTSIRVLSLNENQISDKEMEAFAQAL 1504

Query: 412  KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
              N +I  + L GN I  KG  A A+ L  N+ + +L L  N I   G +A ++ L  + 
Sbjct: 1505 ASNTSIGVLSLNGNQISDKGMEAFAQALASNTTLRTLRLDNNQISDKGMEAFAQALASNT 1564

Query: 472  NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALT 531
            +I  L L   QI   G   +A  L  N  +S L L  N + D+G +  AQ+    N AL 
Sbjct: 1565 SIGVLSLNGNQISDKGIVALAQALASNTILSELSLNENQISDQGMEAFAQAL-ASNTALR 1623

Query: 532  SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            ++ L  N+I D G  A AQAL +N  ++  SLN
Sbjct: 1624 ALRLDNNQISDKGMEAFAQALASNTILSELSLN 1656



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 112/222 (50%), Gaps = 3/222 (1%)

Query: 360  KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
            K A +++ N  IS +GA  +A  + +  +L  ++L  N I D+GAE IA AL  N  + T
Sbjct: 1341 KFASVNLSNQKISDRGAEVLAHSLASNTTLKSLDLDRNQISDKGAEAIAQALASNAALET 1400

Query: 420  IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
            + L GN I  KGA AIA+ L  N+ +  L L  N I   G +A ++ L  +  +  L L 
Sbjct: 1401 LWLNGNQISDKGAEAIAQSLASNAALWKLSLNGNQISDQGMEAFAQALASNTILMDLSLN 1460

Query: 480  WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
              QI   G +  A  L  N +I +L L  N + D+  +  AQ+    N ++  + L  N+
Sbjct: 1461 GNQISDQGMKAFAQALASNTSIRVLSLNENQISDKEMEAFAQAL-ASNTSIGVLSLNGNQ 1519

Query: 540  IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            I D G  A AQAL +N    + +L L NN ++  G  A   A
Sbjct: 1520 ISDKGMEAFAQALASN--TTLRTLRLDNNQISDKGMEAFAQA 1559



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 3/196 (1%)

Query: 150  SKQTLNEFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
            S Q +  FA+ L    A  ++ +      D+G+   A++L  N    E+S   N I+  G
Sbjct: 1605 SDQGMEAFAQALASNTALRALRLDNNQISDKGMEAFAQALASNTILSELSLNGNQISDQG 1664

Query: 207  IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            ++AF   L SNI L+ L L  N I D+G++     L  N  +  L+L +  + D+G +A 
Sbjct: 1665 MEAFAQALASNITLRALRLDNNQISDQGMEAFAQTLASNTTLRALRLDNNQISDKGMEAF 1724

Query: 267  AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
            A+ + +N+ +RVL LN N I   G  + A+ L+ N+ +  L LNGN        A A+ L
Sbjct: 1725 AQTMASNTSIRVLSLNGNQISDQGMKAFAQTLVSNTILMDLSLNGNQISDKRMKAFAQTL 1784

Query: 327  EGNKSLRELHLHGNSI 342
              N ++    L+G  I
Sbjct: 1785 ASNTAVGWFRLNGQVI 1800


>gi|395515531|ref|XP_003761956.1| PREDICTED: protein NLRC3 [Sarcophilus harrisii]
          Length = 1153

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 154/441 (34%), Positives = 227/441 (51%), Gaps = 10/441 (2%)

Query: 154  LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDG 212
            L     +L    S+ +    F D  +  L   L       +++S A N I   G KA   
Sbjct: 717  LKSLLPQLLYCRSLRLDNNQFQDNVMELLGSVLSSKDCHIQKISLAENQIHNKGAKALAR 776

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
             L  N +L  L+L  N IG +G K L D L  N  +  L L +  ++DEGAK IA+ L  
Sbjct: 777  SLLVNRSLTVLDLRNNSIGPQGAKALADSLKINRVLISLSLQNNVIKDEGAKFIADALMV 836

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            N +L +L L  N I   G   +A+AL +N +++ L L+ N  G  G+ ALA+ L+ N+ L
Sbjct: 837  NHMLSMLHLQKNSIGSLGAKPIADALKKNGSLKELMLSSNSVGNDGSKALAEALKVNQGL 896

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
              L L  NSI D G+ AL   L      L+ L++  NSIS  GA  +A  +++ ++L  +
Sbjct: 897  ITLDLQSNSISDAGVAALTRALCINHTLLS-LNLRENSISPDGAQEIASALRSNQALQNL 955

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            +L  N + D+GA+ IA A+K+NR + T+ L  N I    A A+ + L+ N  +TSLDL  
Sbjct: 956  DLTANLLHDQGAQAIAAAVKENRVLRTLHLQWNFIQVNAAKALGQALQFNRSLTSLDLQE 1015

Query: 453  NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            N IG +G  AL+  LK + ++  L L    IG  GA+ + D L  N T+ ILDLR N + 
Sbjct: 1016 NAIGDEGMMALARALKMNTSLTALYLQVASIGVLGAQALGDALAVNKTLEILDLRGNSIG 1075

Query: 513  DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
              GAK +A + K +N +L  ++L  N +  DGA  IA AL  N       +NL  N + +
Sbjct: 1076 AAGAKAIANALK-INSSLRMLNLQENSLGMDGAICIATALTNNH--GFKHINLQGNHIGE 1132

Query: 573  FGQSAL-----TDAKDLVYEM 588
             G   +     T+A D + EM
Sbjct: 1133 SGARMISEAIKTNAPDCIVEM 1153


>gi|426255089|ref|XP_004021197.1| PREDICTED: protein NLRC3 [Ovis aries]
          Length = 1048

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/370 (35%), Positives = 205/370 (55%), Gaps = 11/370 (2%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 670  IQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASL 729

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N I   G  S+AEAL  N T+  LHL  N  G +G   +A  L+ N+SL+EL L  
Sbjct: 730  SLQSNRIRDDGARSMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELILQS 789

Query: 340  NSIGDEGIRALMSGLSSRKGKLAV--------LDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            NSI D G+ A +  L +    LA+        L++  NSI  +GA  +A  ++   +L  
Sbjct: 790  NSISDPGVAAPLGALRTNPKLLALCTNQTLLSLNLRENSIGPEGARDLAGALRTNSTLKS 849

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            ++L  N + D+GA+ +A+A+++N  +T++ L  N I +  A A+ + L+ N+ +TSLDL 
Sbjct: 850  LDLTANLLHDQGAQAVAEAVRENCALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQ 909

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR N +
Sbjct: 910  ENAIGDEGASAVASALKVNTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNTI 969

Query: 512  RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
               GAK LA + K VN +L  ++L  N +  +GA  +A AL  N    +  +NL  N + 
Sbjct: 970  EVAGAKALANALK-VNSSLRRLNLQENSLGMEGAICVATALSGNH--GLRHINLQGNHIG 1026

Query: 572  KFGQSALTDA 581
            + G   +++A
Sbjct: 1027 ESGARMISEA 1036



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 134/420 (31%), Positives = 197/420 (46%), Gaps = 40/420 (9%)

Query: 154  LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDG 212
            L     +L    ++ +    F D  +  L   L G +   + +S A N I+  G KA   
Sbjct: 631  LQSLLPQLLYCRNLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAKALAR 690

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
             L  N +L TL+L  N IG +G K L D L  N  +  L L S  +RD+GA+++AE L  
Sbjct: 691  SLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGARSMAEALAT 750

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG---------GALGANALA 323
            N  L VL L  N I   G   +A+AL +N +++ L L  N           GAL  N   
Sbjct: 751  NRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELILQSNSISDPGVAAPLGALRTNPKL 810

Query: 324  KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
              L  N++L  L+L  NSIG EG R L   L +    L  LD+  N +  +GA  VAE +
Sbjct: 811  LALCTNQTLLSLNLRENSIGPEGARDLAGALRT-NSTLKSLDLTANLLHDQGAQAVAEAV 869

Query: 384  K-NC---------------------------KSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + NC                            SL  ++L  N IGDEGA  +A ALK N 
Sbjct: 870  RENCALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQENAIGDEGASAVASALKVNT 929

Query: 416  TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
             +T + L   +I + GA A+   L  N  +  LDL  N I   GAKAL+  LK + ++  
Sbjct: 930  ALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNTIEVAGAKALANALKVNSSLRR 989

Query: 476  LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
            L L    +G  GA  VA  L  N+ +  ++L+ N + + GA+ ++++ K  N  L ++++
Sbjct: 990  LNLQENSLGMEGAICVATALSGNHGLRHINLQGNHIGESGARMISEAIK-TNAPLCTVEM 1048



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 12/261 (4%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 642 RNLRLDTNQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTTL 701

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+ ++ L  N I   GA ++A  L  N  ++ L L  
Sbjct: 702 DLRSNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGARSMAEALATNRTLSVLHLQK 761

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR---------YNNTISI 503
           N IG  G + +++ LK + ++  L L    I   G       LR          N T+  
Sbjct: 762 NSIGPVGTQQMADALKQNRSLKELILQSNSISDPGVAAPLGALRTNPKLLALCTNQTLLS 821

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           L+LR N +  EGA+ LA + +  N  L S+DL  N + D GA A+A+A++  E+ A+TSL
Sbjct: 822 LNLRENSIGPEGARDLAGALR-TNSTLKSLDLTANLLHDQGAQAVAEAVR--ENCALTSL 878

Query: 564 NLANNFLTKFGQSALTDAKDL 584
           +L  NF+      AL  A  L
Sbjct: 879 HLQWNFIQAGAAKALGQALQL 899


>gi|410896007|ref|XP_003961491.1| PREDICTED: protein NLRC3-like [Takifugu rubripes]
          Length = 1067

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 144/429 (33%), Positives = 222/429 (51%), Gaps = 5/429 (1%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
            T+     +L   S + +   NF D+ +  L   L       +++S A N I+  G KA  
Sbjct: 630  TVKCLLPQLLYCSHLRLESNNFKDDVMELLGSLLSAKDCQIQKMSLAENAISNKGAKALS 689

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N  L +LNL  N IG +G + L + L  N  +  L L S  + + GA+A+AE+L+
Sbjct: 690  RALLVNRTLTSLNLRNNNIGSKGARFLAEALKMNQALVSLNLQSNGIDEAGAEALAEVLQ 749

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L +  N++   G   +A+AL  N T+  L +  N  G  G  ALA+ L  N +
Sbjct: 750  CNRKLVTLNMQKNIVGAGGAKRIADALKTNKTLTELMICSNQLGDKGTAALAEALTVNHT 809

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L L  NSI + G+ AL   LS  +G L  L++  NSI  +GA ++A+ ++   SL  
Sbjct: 810  LLSLQLQSNSISNRGMTALTKALSLNRG-LVSLNLRENSIGVEGARNMAKALQKNSSLQD 868

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            ++L  + + D+G + IA A+K N+ + ++ L  N I S    A+A  L  N+ +  LDL 
Sbjct: 869  LDLTADLLHDDGVQAIAAAIKNNQGLRSLHLQWNFIKSSATKALAHSLHFNTTMELLDLQ 928

Query: 452  YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             N +G +G   L++ LK + ++ TL L    +G  GA  +A+ L  N T+  LDLR N +
Sbjct: 929  ENAVGNEGVTFLADALKANTSLRTLCLQGVSVGTGGAIALAEALMSNQTLQTLDLRGNSV 988

Query: 512  RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
              EGAK LA + K  N +L S++L  N +  DGA  IA A K N    +T +NL  N + 
Sbjct: 989  GMEGAKALANALK-TNRSLKSLNLQENSLGMDGAIFIATAFKENHQ--LTYINLQGNGIG 1045

Query: 572  KFGQSALTD 580
            + G   ++D
Sbjct: 1046 ESGAKVISD 1054



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 203/363 (55%), Gaps = 1/363 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+++   N G +G  FLAE+L  NQ    ++  +NGI  AG +A   VLQ N  L 
Sbjct: 696  RTLTSLNLRNNNIGSKGARFLAEALKMNQALVSLNLQSNGIDEAGAEALAEVLQCNRKLV 755

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TLN+  N +G  G K + D L  N  +  L + S  L D+G  A+AE L  N  L  L+L
Sbjct: 756  TLNMQKNIVGAGGAKRIADALKTNKTLTELMICSNQLGDKGTAALAEALTVNHTLLSLQL 815

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I   G T+L +AL  N  + SL+L  N  G  GA  +AK L+ N SL++L L  + 
Sbjct: 816  QSNSISNRGMTALTKALSLNRGLVSLNLRENSIGVEGARNMAKALQKNSSLQDLDLTADL 875

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G++A+ + + + +G L  L +  N I +     +A  +    ++  ++L  N +G+
Sbjct: 876  LHDDGVQAIAAAIKNNQG-LRSLHLQWNFIKSSATKALAHSLHFNTTMELLDLQENAVGN 934

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EG   +ADALK N ++ T+ L G ++ + GA A+A  L  N  + +LDL  N +G +GAK
Sbjct: 935  EGVTFLADALKANTSLRTLCLQGVSVGTGGAIALAEALMSNQTLQTLDLRGNSVGMEGAK 994

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++ +L L    +G  GA F+A   + N+ ++ ++L+ NG+ + GAK ++ 
Sbjct: 995  ALANALKTNRSLKSLNLQENSLGMDGAIFIATAFKENHQLTYINLQGNGIGESGAKVISD 1054

Query: 522  SFK 524
            + +
Sbjct: 1055 TIR 1057



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/282 (36%), Positives = 147/282 (52%), Gaps = 1/282 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  + + +     GD+G   LAE+L  N T   +   +N I+  G+ A    L  N  L 
Sbjct: 780  KTLTELMICSNQLGDKGTAALAEALTVNHTLLSLQLQSNSISNRGMTALTKALSLNRGLV 839

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            +LNL  N IG EG + +   L  N+ ++ L L++  L D+G +AIA  +KNN  LR L L
Sbjct: 840  SLNLRENSIGVEGARNMAKALQKNSSLQDLDLTADLLHDDGVQAIAAAIKNNQGLRSLHL 899

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I  S   +LA +L  N+T+  L L  N  G  G   LA  L+ N SLR L L G S
Sbjct: 900  QWNFIKSSATKALAHSLHFNTTMELLDLQENAVGNEGVTFLADALKANTSLRTLCLQGVS 959

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            +G  G  AL   L S +  L  LD+  NS+  +GA  +A  +K  +SL  +NL  N +G 
Sbjct: 960  VGTGGAIALAEALMSNQ-TLQTLDLRGNSVGMEGAKALANALKTNRSLKSLNLQENSLGM 1018

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
            +GA  IA A K+N  +T I+L GN I   GA  I+  ++ N+
Sbjct: 1019 DGAIFIATAFKENHQLTYINLQGNGIGESGAKVISDTIRGNT 1060



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 138/248 (55%), Gaps = 3/248 (1%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L  N+  D+ +  L S LS++  ++  + +  N+IS KGA  ++  +   ++L  +N
Sbjct: 643 HLRLESNNFKDDVMELLGSLLSAKDCQIQKMSLAENAISNKGAKALSRALLVNRTLTSLN 702

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N+IG +GA  +A+ALK N+ + +++L  N I   GA A+A VL+ N  + +L++  N
Sbjct: 703 LRNNNIGSKGARFLAEALKMNQALVSLNLQSNGIDEAGAEALAEVLQCNRKLVTLNMQKN 762

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +GA GAK +++ LK +  +  L +   Q+G  G   +A+ L  N+T+  L L++N + +
Sbjct: 763 IVGAGGAKRIADALKTNKTLTELMICSNQLGDKGTAALAEALTVNHTLLSLQLQSNSISN 822

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            G   L ++   +N  L S++L  N I  +GA  +A+AL+ N   ++  L+L  + L   
Sbjct: 823 RGMTALTKALS-LNRGLVSLNLRENSIGVEGARNMAKALQKNS--SLQDLDLTADLLHDD 879

Query: 574 GQSALTDA 581
           G  A+  A
Sbjct: 880 GVQAIAAA 887


>gi|344291959|ref|XP_003417696.1| PREDICTED: protein NLRC3 [Loxodonta africana]
          Length = 1067

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 144/431 (33%), Positives = 219/431 (50%), Gaps = 5/431 (1%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFD 211
             L     +L    S+ +    F D  +  L   L G +   +++S A N I+  G KA  
Sbjct: 628  VLQSLLPQLLYCQSLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALA 687

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N +L  L+L GN IG +G K L D L  N  +  L L S  ++D+GA +IAE L 
Sbjct: 688  RSLLVNRSLTALDLRGNSIGPQGAKALADALKINRTLASLSLQSNAIKDDGAGSIAEALA 747

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +N  L +L L  N I   G   +A+AL +N +++ L  + N     GA ALA+ L+ N+ 
Sbjct: 748  SNRTLCMLCLQKNTIGPVGAQRMADALKQNRSLKELIFSSNSISDRGAKALAEALKVNQG 807

Query: 332  LRELH-LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L  L  +      D   R   S  S  +G L+   +  NSIS +GA  +A  +    +L 
Sbjct: 808  LESLEGVCLTPSRDPVDRGPPSARSEAQGLLSFFSLRENSISPEGAQALARALCTNSTLK 867

Query: 391  WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
             ++L  N + D GA+ IA A+++NR +T++ L  N + +  A A+   L+ N  + SLDL
Sbjct: 868  NLDLTANLLHDRGAQAIAGAVRENRALTSLHLQWNFLQASAAEALGHALQLNRSLVSLDL 927

Query: 451  AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
              N IG +GA A++  LK +  +  L L    IGA GA+ + + L  N T+ +LDLR N 
Sbjct: 928  QENAIGDEGASAVARALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEVLDLRGNA 987

Query: 511  LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
            +   GAK LA + K VN +L  ++L  N +  DGA  IA AL  N    +  +NL  N +
Sbjct: 988  IGVAGAKALANALK-VNSSLRRLNLQENSLGMDGAVCIATALSGNH--GLQHINLQGNHI 1044

Query: 571  TKFGQSALTDA 581
             + G   +++A
Sbjct: 1045 GESGTRMISEA 1055



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 176/375 (46%), Gaps = 31/375 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +++D+ G + G +G   LA++L  N+T   +S  +N I   G  +    L SN  L 
Sbjct: 694  RSLTALDLRGNSIGPQGAKALADALKINRTLASLSLQSNAIKDDGAGSIAEALASNRTLC 753

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE- 280
             L L  N IG  G + + D L  N  ++ L  SS  + D GAKA+AE LK N  L  LE 
Sbjct: 754  MLCLQKNTIGPVGAQRMADALKQNRSLKELIFSSNSISDRGAKALAEALKVNQGLESLEG 813

Query: 281  -----------------------------LNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
                                         L  N I   G  +LA AL  NST+++L L  
Sbjct: 814  VCLTPSRDPVDRGPPSARSEAQGLLSFFSLRENSISPEGAQALARALCTNSTLKNLDLTA 873

Query: 312  NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
            N     GA A+A  +  N++L  LHL  N +      AL   L   +  L  LD+  N+I
Sbjct: 874  NLLHDRGAQAIAGAVRENRALTSLHLQWNFLQASAAEALGHALQLNR-SLVSLDLQENAI 932

Query: 372  SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
              +GA  VA  +K   +L  + L +  IG  GA+ + +AL  NRT+  +DL GN I   G
Sbjct: 933  GDEGASAVARALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEVLDLRGNAIGVAG 992

Query: 432  ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
            A A+A  LK NS +  L+L  N +G DGA  ++  L  +  +  + L    IG SG   +
Sbjct: 993  AKALANALKVNSSLRRLNLQENSLGMDGAVCIATALSGNHGLQHINLQGNHIGESGTRMI 1052

Query: 492  ADMLRYNNTISILDL 506
            ++ +R N     +++
Sbjct: 1053 SEAVRTNAPTCTVEM 1067



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 140/290 (48%), Gaps = 40/290 (13%)

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
           ++  I+ + L  N     GA ALA+ L  N+SL  L L GNSIG +G +AL   L   + 
Sbjct: 664 KDCRIQKISLAENQISNKGAKALARSLLVNRSLTALDLRGNSIGPQGAKALADALKINR- 722

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
            LA L + +N+I   GA  +AE + + ++L  + L  N IG  GA+++ADALKQNR++  
Sbjct: 723 TLASLSLQSNAIKDDGAGSIAEALASNRTLCMLCLQKNTIGPVGAQRMADALKQNRSLKE 782

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLD-----LAYNPIGADGAKALSEVLKFHGNIN 474
           +    N+I  +GA A+A  LK N  + SL+      + +P+      A SE         
Sbjct: 783 LIFSSNSISDRGAKALAEALKVNQGLESLEGVCLTPSRDPVDRGPPSARSEA-------- 834

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
                                     +S   LR N +  EGA+ LA++    N  L ++D
Sbjct: 835 -----------------------QGLLSFFSLRENSISPEGAQALARAL-CTNSTLKNLD 870

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           L  N + D GA AIA A++ N   A+TSL+L  NFL      AL  A  L
Sbjct: 871 LTANLLHDRGAQAIAGAVRENR--ALTSLHLQWNFLQASAAEALGHALQL 918


>gi|320170281|gb|EFW47180.1| hypothetical protein CAOG_05124 [Capsaspora owczarzaki ATCC 30864]
          Length = 1377

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 196/367 (53%), Gaps = 2/367 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           FGD G   +A +L  N T  ++    N I   G +A    L+ N  L  L L GN +GD 
Sbjct: 55  FGDAGAQAIAVALKVNTTLTKIDLHGNQIGEVGAQAIAEALKVNTTLTKLYLRGNRVGDA 114

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  + +L L    +   GA+AIA+ LK N+ L   +L +N I   G  +
Sbjct: 115 GAQAIAEALKVNTTLTKLYLQYNQIGHVGAQAIADALKVNTTLTQFDLQDNQIGRVGAQA 174

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A+AL  N+ +    L GN  G +GA A+A+ L+ N +L +++LH N  G+ G +A+   
Sbjct: 175 IADALKVNTKLTQFDLRGNQVGDVGAQAIAEALKVNTTLTQVNLHNNKFGEVGAQAIAEA 234

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L      L  L    NSI   G   +AE +    +L+ ++L  N +GD GA  IA+ALK 
Sbjct: 235 LKV-NTVLTQLIFSTNSIGVAGTHAIAEALMVNTTLIQLDLPGNQVGDVGARAIAEALKV 293

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N T+T +DL  N I   GA AIA  LK N+ +T L  + N IG  G +A++E L  +  +
Sbjct: 294 NTTLTQLDLRYNQIGDVGAQAIAEALKVNTALTQLIFSTNSIGVAGTQAIAEALMVNTTL 353

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
             L L   ++G +GA  V++ L  N T+  L+L  N ++D GA+ ++++ +  N  L ++
Sbjct: 354 IQLDLDSNRVGDAGARSVSEALLKNTTLQNLNLWLNQIKDAGARSISEALQ-KNTTLQNL 412

Query: 534 DLAFNEI 540
           +LA N I
Sbjct: 413 NLAENRI 419



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/322 (37%), Positives = 181/322 (56%), Gaps = 4/322 (1%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+AIA  LK N+ L  ++L+ N I   G  ++AEAL  N+T+  L+L GN  G  GA
Sbjct: 57  DAGAQAIAVALKVNTTLTKIDLHGNQIGEVGAQAIAEALKVNTTLTKLYLRGNRVGDAGA 116

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+A+ L+ N +L +L+L  N IG  G +A+   L      L   D+ +N I   GA  +
Sbjct: 117 QAIAEALKVNTTLTKLYLQYNQIGHVGAQAIADALKV-NTTLTQFDLQDNQIGRVGAQAI 175

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A+ +K    L   +L  N +GD GA+ IA+ALK N T+T ++L  N     GA AIA  L
Sbjct: 176 ADALKVNTKLTQFDLRGNQVGDVGAQAIAEALKVNTTLTQVNLHNNKFGEVGAQAIAEAL 235

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           K N+V+T L  + N IG  G  A++E L  +  +  L L   Q+G  GA  +A+ L+ N 
Sbjct: 236 KVNTVLTQLIFSTNSIGVAGTHAIAEALMVNTTLIQLDLPGNQVGDVGARAIAEALKVNT 295

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
           T++ LDLR N + D GA+ +A++ K VN ALT +  + N I   G  AIA+AL  N    
Sbjct: 296 TLTQLDLRYNQIGDVGAQAIAEALK-VNTALTQLIFSTNSIGVAGTQAIAEALMVN--TT 352

Query: 560 VTSLNLANNFLTKFGQSALTDA 581
           +  L+L +N +   G  ++++A
Sbjct: 353 LIQLDLDSNRVGDAGARSVSEA 374



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 170/358 (47%), Gaps = 29/358 (8%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + + + G   GD G   +AE+L  N T  ++    N I   G +A  
Sbjct: 89  QAIAEALKVNTTLTKLYLRGNRVGDAGAQAIAEALKVNTTLTKLYLQYNQIGHVGAQAIA 148

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L   +L  N IG  G + + D L  N  + +  L    + D GA+AIAE LK
Sbjct: 149 DALKVNTTLTQFDLQDNQIGRVGAQAIADALKVNTKLTQFDLRGNQVGDVGAQAIAEALK 208

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  + L+NN     G  ++AEAL  N+ +  L  + N  G  G +A+A+ L  N +
Sbjct: 209 VNTTLTQVNLHNNKFGEVGAQAIAEALKVNTVLTQLIFSTNSIGVAGTHAIAEALMVNTT 268

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L +L L GN +GD G RA                             +AE +K   +L  
Sbjct: 269 LIQLDLPGNQVGDVGARA-----------------------------IAEALKVNTTLTQ 299

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N IGD GA+ IA+ALK N  +T +    N+I   G  AIA  L  N+ +  LDL 
Sbjct: 300 LDLRYNQIGDVGAQAIAEALKVNTALTQLIFSTNSIGVAGTQAIAEALMVNTTLIQLDLD 359

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            N +G  GA+++SE L  +  +  L L   QI  +GA  +++ L+ N T+  L+L  N
Sbjct: 360 SNRVGDAGARSVSEALLKNTTLQNLNLWLNQIKDAGARSISEALQKNTTLQNLNLAEN 417



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/284 (33%), Positives = 151/284 (53%), Gaps = 1/284 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G  G   +A++L  N T  +     N I   G +A    L+ N  L   +L GN +GD
Sbjct: 138 QIGHVGAQAIADALKVNTTLTQFDLQDNQIGRVGAQAIADALKVNTKLTQFDLRGNQVGD 197

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + + + L  N  + ++ L +    + GA+AIAE LK N++L  L  + N I  +G  
Sbjct: 198 VGAQAIAEALKVNTTLTQVNLHNNKFGEVGAQAIAEALKVNTVLTQLIFSTNSIGVAGTH 257

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++AEAL+ N+T+  L L GN  G +GA A+A+ L+ N +L +L L  N IGD G +A+  
Sbjct: 258 AIAEALMVNTTLIQLDLPGNQVGDVGARAIAEALKVNTTLTQLDLRYNQIGDVGAQAIAE 317

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  L    NSI   G   +AE +    +L+ ++L  N +GD GA  +++AL 
Sbjct: 318 ALKVNTA-LTQLIFSTNSIGVAGTQAIAEALMVNTTLIQLDLDSNRVGDAGARSVSEALL 376

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           +N T+  ++L  N I   GA +I+  L+ N+ + +L+LA N IG
Sbjct: 377 KNTTLQNLNLWLNQIKDAGARSISEALQKNTTLQNLNLAENRIG 420



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 124/264 (46%), Gaps = 29/264 (10%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +  D+ G   GD G   +AE+L  N T  +V+   N     G +A    L+ N  L  L
Sbjct: 185 LTQFDLRGNQVGDVGAQAIAEALKVNTTLTQVNLHNNKFGEVGAQAIAEALKVNTVLTQL 244

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
             S N IG  G   + + L+ N  + +L L    + D GA+AIAE LK N+ L  L+L  
Sbjct: 245 IFSTNSIGVAGTHAIAEALMVNTTLIQLDLPGNQVGDVGARAIAEALKVNTTLTQLDLRY 304

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  ++AEAL  N+ +  L  + N  G  G  A+A+ L  N +L +L L  N +G
Sbjct: 305 NQIGDVGAQAIAEALKVNTALTQLIFSTNSIGVAGTQAIAEALMVNTTLIQLDLDSNRVG 364

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G R++   L                            +KN  +L  +NL++N I D G
Sbjct: 365 DAGARSVSEAL----------------------------LKNT-TLQNLNLWLNQIKDAG 395

Query: 404 AEKIADALKQNRTITTIDLGGNNI 427
           A  I++AL++N T+  ++L  N I
Sbjct: 396 ARSISEALQKNTTLQNLNLAENRI 419



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 1/220 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + V++    FG+ G   +AE+L  N    ++ F+ N I  AG  A  
Sbjct: 201 QAIAEALKVNTTLTQVNLHNNKFGEVGAQAIAEALKVNTVLTQLIFSTNSIGVAGTHAIA 260

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  N  L  L+L GN +GD G + + + L  N  + +L L    + D GA+AIAE LK
Sbjct: 261 EALMVNTTLIQLDLPGNQVGDVGARAIAEALKVNTTLTQLDLRYNQIGDVGAQAIAEALK 320

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  L  + N I  +G  ++AEAL+ N+T+  L L+ N  G  GA ++++ L  N +
Sbjct: 321 VNTALTQLIFSTNSIGVAGTQAIAEALMVNTTLIQLDLDSNRVGDAGARSVSEALLKNTT 380

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           L+ L+L  N I D G R++   L  +   L  L++  N I
Sbjct: 381 LQNLNLWLNQIKDAGARSISEAL-QKNTTLQNLNLAENRI 419


>gi|46447089|ref|YP_008454.1| hypothetical protein pc1455 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46400730|emb|CAF24179.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1866

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 150/418 (35%), Positives = 224/418 (53%), Gaps = 8/418 (1%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            S+ + G    D+G+   A++L  N T E +SF  N I+  G++AF   L SN  L++L L
Sbjct: 1402 SLYLGGNQISDKGMEAFAQALASNTTLESLSFNENQISDKGMEAFAQALASNTTLESLYL 1461

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             GN I D+G++     L  N  ++ L L    + D+G +A A+ L +N+ L+ L  N N 
Sbjct: 1462 GGNQISDKGMEAFAQALASNTTLKSLYLDDNQISDKGMEAFAQALASNTTLKSLSFNENQ 1521

Query: 286  IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            I   G  + A+AL  N+T +SL+L GN     G  A A+ L  N +L+ L+L  N I ++
Sbjct: 1522 ISDKGMEAFAQALASNTTFKSLYLGGNQISDKGMEAFAQALASNTTLKSLYLDDNQISNK 1581

Query: 346  GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND--IGDEG 403
            G +AL   L+S    L  L    N IS KGA  +A+ + +  +L   +LY++D  I D+G
Sbjct: 1582 GAQALAQALASN-TILKSLSFNENQISDKGAQALAQALASNTTL--KSLYLDDSQISDKG 1638

Query: 404  AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            A+ +A AL  N+ + ++ LG N I  KGA A+A+ L  N+ + SL L    I   G +A+
Sbjct: 1639 AQALAQALASNKALKSLCLGSNQISDKGAQALAQALASNTTLKSLSLNGKQISDKGMEAI 1698

Query: 464  SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
            ++ L  +  + +L L   QI   G E  A  L  N T+  LDLR N + D+G +  AQ+ 
Sbjct: 1699 AQALASNTTLKSLSLNGKQISDKGMEAFAQTLASNTTLESLDLRNNQISDKGMQAFAQTL 1758

Query: 524  KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
               N  L S+DL  N+I D G  AIAQAL +N   A+ SL L  N +   G  A+  A
Sbjct: 1759 -ASNTTLESLDLRNNQINDKGMEAIAQALASN--TALKSLYLDGNQINDKGMEAIAQA 1813



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 132/390 (33%), Positives = 199/390 (51%), Gaps = 30/390 (7%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            S+ +      D+G+   A++L  N T + +SF  N I+  G++AF   L SN   K+L L
Sbjct: 1486 SLYLDDNQISDKGMEAFAQALASNTTLKSLSFNENQISDKGMEAFAQALASNTTFKSLYL 1545

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             GN I D+G+                            +A A+ L +N+ L+ L L++N 
Sbjct: 1546 GGNQISDKGM----------------------------EAFAQALASNTTLKSLYLDDNQ 1577

Query: 286  IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            I   G  +LA+AL  N+ ++SL  N N     GA ALA+ L  N +L+ L+L  + I D+
Sbjct: 1578 ISNKGAQALAQALASNTILKSLSFNENQISDKGAQALAQALASNTTLKSLYLDDSQISDK 1637

Query: 346  GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
            G +AL   L+S K  L  L +G+N IS KGA  +A+ + +  +L  ++L    I D+G E
Sbjct: 1638 GAQALAQALASNKA-LKSLCLGSNQISDKGAQALAQALASNTTLKSLSLNGKQISDKGME 1696

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             IA AL  N T+ ++ L G  I  KG  A A+ L  N+ + SLDL  N I   G +A ++
Sbjct: 1697 AIAQALASNTTLKSLSLNGKQISDKGMEAFAQTLASNTTLESLDLRNNQISDKGMQAFAQ 1756

Query: 466  VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
             L  +  + +L L   QI   G E +A  L  N  +  L L  N + D+G + +AQ+   
Sbjct: 1757 TLASNTTLESLDLRNNQINDKGMEAIAQALASNTALKSLYLDGNQINDKGMEAIAQAL-A 1815

Query: 526  VNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             N AL S+ L  N+I D G  AI QA+ +N
Sbjct: 1816 SNTALKSLYLDGNQINDKGMEAITQAVASN 1845



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 177/342 (51%), Gaps = 2/342 (0%)

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            LN  G    +  V+ + + L  N  ++   L    + D GA+A A+ L +N+ L+ L L 
Sbjct: 1347 LNRKGISDKEMEVEVIANGLACNTALKSFWLKGNQISDRGAEAFAQALASNTTLKSLYLG 1406

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
             N I   G  + A+AL  N+T+ SL  N N     G  A A+ L  N +L  L+L GN I
Sbjct: 1407 GNQISDKGMEAFAQALASNTTLESLSFNENQISDKGMEAFAQALASNTTLESLYLGGNQI 1466

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
             D+G+ A    L+S    L  L + +N IS KG    A+ + +  +L  ++   N I D+
Sbjct: 1467 SDKGMEAFAQALASN-TTLKSLYLDDNQISDKGMEAFAQALASNTTLKSLSFNENQISDK 1525

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            G E  A AL  N T  ++ LGGN I  KG  A A+ L  N+ + SL L  N I   GA+A
Sbjct: 1526 GMEAFAQALASNTTFKSLYLGGNQISDKGMEAFAQALASNTTLKSLYLDDNQISNKGAQA 1585

Query: 463  LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
            L++ L  +  + +L     QI   GA+ +A  L  N T+  L L  + + D+GA+ LAQ+
Sbjct: 1586 LAQALASNTILKSLSFNENQISDKGAQALAQALASNTTLKSLYLDDSQISDKGAQALAQA 1645

Query: 523  FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
                N+AL S+ L  N+I D GA A+AQAL +N  +   SLN
Sbjct: 1646 -LASNKALKSLCLGSNQISDKGAQALAQALASNTTLKSLSLN 1686



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 107/182 (58%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            S+ ++G+   D+G+  +A++L  N T + +S     I+  G++AF   L SN  L++L+L
Sbjct: 1682 SLSLNGKQISDKGMEAIAQALASNTTLKSLSLNGKQISDKGMEAFAQTLASNTTLESLDL 1741

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
              N I D+G++     L  N  +E L L +  + D+G +AIA+ L +N+ L+ L L+ N 
Sbjct: 1742 RNNQISDKGMQAFAQTLASNTTLESLDLRNNQINDKGMEAIAQALASNTALKSLYLDGNQ 1801

Query: 286  IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            I+  G  ++A+AL  N+ ++SL+L+GN     G  A+ + +  N +L++  L+GN I  E
Sbjct: 1802 INDKGMEAIAQALASNTALKSLYLDGNQINDKGMEAITQAVASNTALKKFWLNGNLIKQE 1861

Query: 346  GI 347
            G+
Sbjct: 1862 GV 1863



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 131/266 (49%), Gaps = 1/266 (0%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            S+  +     D+G   LA++L  N T + +    + I+  G +A    L SN ALK+L L
Sbjct: 1598 SLSFNENQISDKGAQALAQALASNTTLKSLYLDDSQISDKGAQALAQALASNKALKSLCL 1657

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
              N I D+G + L   L  N  ++ L L+   + D+G +AIA+ L +N+ L+ L LN   
Sbjct: 1658 GSNQISDKGAQALAQALASNTTLKSLSLNGKQISDKGMEAIAQALASNTTLKSLSLNGKQ 1717

Query: 286  IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            I   G  + A+ L  N+T+ SL L  N     G  A A+ L  N +L  L L  N I D+
Sbjct: 1718 ISDKGMEAFAQTLASNTTLESLDLRNNQISDKGMQAFAQTLASNTTLESLDLRNNQINDK 1777

Query: 346  GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
            G+ A+   L+S    L  L +  N I+ KG   +A+ + +  +L  + L  N I D+G E
Sbjct: 1778 GMEAIAQALASNTA-LKSLYLDGNQINDKGMEAIAQALASNTALKSLYLDGNQINDKGME 1836

Query: 406  KIADALKQNRTITTIDLGGNNIHSKG 431
             I  A+  N  +    L GN I  +G
Sbjct: 1837 AITQAVASNTALKKFWLNGNLIKQEG 1862


>gi|124486873|ref|NP_001074749.1| protein NLRC3 [Mus musculus]
 gi|182887927|gb|AAI60196.1| NLR family, CARD domain containing 3 [synthetic construct]
          Length = 1102

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/429 (34%), Positives = 224/429 (52%), Gaps = 8/429 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +    ++S A N I   G K
Sbjct: 662  SQHVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAK 721

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG  G K L D L  N  +  L L S  ++D+G   +AE
Sbjct: 722  ALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAE 781

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  + +L+L  N+I   G   +A+AL +N ++++L  + N  G  GA ALA+ L+ 
Sbjct: 782  ALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKV 841

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+  LM  L S +  L+ L++  NSIS +GA  + + +    +
Sbjct: 842  NQILENLDLQSNSISDMGVTVLMRALCSNQ-TLSSLNLRENSISPEGAQALTQALCRNNT 900

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D GA+ IA A+ +N ++T + L  N I +  A A+ + L+ N  +T+L
Sbjct: 901  LKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTL 960

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L  N T+ ILDLR 
Sbjct: 961  DLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRG 1020

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K +N +L  ++L  N +  DGA  +A AL  N    +  +NL  N
Sbjct: 1021 NDVGAAGAKALANALK-LNSSLRRLNLQENSLGMDGAIFVASALSENH--GLHHINLQGN 1077

Query: 569  FLTKFGQSA 577
                 G+SA
Sbjct: 1078 ---PIGESA 1083



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/363 (33%), Positives = 186/363 (51%), Gaps = 1/363 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+  ++D+   + G  G   LA++L  N+T   +S  +N I   G+      L SN  + 
Sbjct: 731  RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 790

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L L  N IG  G + + D L  N  ++ L  SS  + D GA A+AE LK N IL  L+L
Sbjct: 791  MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 850

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I   G T L  AL  N T+ SL+L  N     GA AL + L  N +L+ L L  N 
Sbjct: 851  QSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANL 910

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D G +A+   +      L  L +  N I A  A  + + ++  ++L  ++L  N IGD
Sbjct: 911  LHDRGAQAIAVAVGENHS-LTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGD 969

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EGA  +A ALK N T+  + L   +I S+GA A+   L  N  +  LDL  N +GA GAK
Sbjct: 970  EGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAK 1029

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA FVA  L  N+ +  ++L+ N + +  A+ +++
Sbjct: 1030 ALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISE 1089

Query: 522  SFK 524
            + K
Sbjct: 1090 AIK 1092



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 168/337 (49%), Gaps = 1/337 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G+  +AE+L  NQT   +    N I   G +     L+ N +LK
Sbjct: 759  RTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLK 818

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N IGD G   L + L  N  +E L L S  + D G   +   L +N  L  L L
Sbjct: 819  ALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 878

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G  +L +AL  N+T++ L L  N     GA A+A  +  N SL  LHL  N 
Sbjct: 879  RENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNF 938

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     RAL   L   +  L  LD+  N+I  +GA  VA  +K   +L+ + L +  IG 
Sbjct: 939  IQAGAARALGQALQLNR-TLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGS 997

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            +GA+ + +AL  NRT+  +DL GN++ + GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 998  QGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAI 1057

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  +  ++ + L    IG S A  +++ ++ N
Sbjct: 1058 FVASALSENHGLHHINLQGNPIGESAARMISEAIKTN 1094



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+  ++  S    GD G   LAE+L  NQ  E +   +N I+  G+    
Sbjct: 805  QQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLM 864

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L SN  L +LNL  N I  EG + L   L  N  ++ L L++  L D GA+AIA  + 
Sbjct: 865  RALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVG 924

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N T+ +L L  N  G  GA+++A  L+ N +
Sbjct: 925  ENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTT 984

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG +G +AL   L+  +  L +LD+  N + A GA  +A  +K   SL  
Sbjct: 985  LIALYLQVASIGSQGAQALGEALTVNR-TLEILDLRGNDVGAAGAKALANALKLNSSLRR 1043

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +GA  +A AL +N  +  I+L GN I    A  I+  +K N+   ++++
Sbjct: 1044 LNLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVEI 1102



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 3/249 (1%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           + L L  N   D  +  L S LS +  ++  + +  N I  KGA  +A  +   +SL+ +
Sbjct: 677 QSLRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITL 736

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG  GA+ +ADALK NRT+T++ L  N I   G   +A  L  N  I+ L L  
Sbjct: 737 DLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQK 796

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+ +++ LK + ++  L      IG  GA  +A+ L+ N  +  LDL++N + 
Sbjct: 797 NLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSIS 856

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           D G   L ++    N+ L+S++L  N I  +GA A+ QAL  N    +  L+L  N L  
Sbjct: 857 DMGVTVLMRAL-CSNQTLSSLNLRENSISPEGAQALTQALCRNN--TLKHLDLTANLLHD 913

Query: 573 FGQSALTDA 581
            G  A+  A
Sbjct: 914 RGAQAIAVA 922



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 94/202 (46%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L +          +D++     D G   +A ++G N +   +    N I A   +
Sbjct: 886  EGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAAR 945

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    LQ N  L TL+L  N IGDEG   +   L  N  +  L L    +  +GA+A+ E
Sbjct: 946  ALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGE 1005

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L +L+L  N +  +G  +LA AL  NS++R L+L  N  G  GA  +A  L  
Sbjct: 1006 ALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSE 1065

Query: 329  NKSLRELHLHGNSIGDEGIRAL 350
            N  L  ++L GN IG+   R +
Sbjct: 1066 NHGLHHINLQGNPIGESAARMI 1087


>gi|158563868|sp|Q5DU56.2|NLRC3_MOUSE RecName: Full=Protein NLRC3
          Length = 1064

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/429 (34%), Positives = 224/429 (52%), Gaps = 8/429 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +    ++S A N I   G K
Sbjct: 624  SQHVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAK 683

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG  G K L D L  N  +  L L S  ++D+G   +AE
Sbjct: 684  ALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAE 743

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  + +L+L  N+I   G   +A+AL +N ++++L  + N  G  GA ALA+ L+ 
Sbjct: 744  ALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKV 803

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+  LM  L S +  L+ L++  NSIS +GA  + + +    +
Sbjct: 804  NQILENLDLQSNSISDMGVTVLMRALCSNQ-TLSSLNLRENSISPEGAQALTQALCRNNT 862

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D GA+ IA A+ +N ++T + L  N I +  A A+ + L+ N  +T+L
Sbjct: 863  LKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTL 922

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L  N T+ ILDLR 
Sbjct: 923  DLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRG 982

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K +N +L  ++L  N +  DGA  +A AL  N    +  +NL  N
Sbjct: 983  NDVGAAGAKALANALK-LNSSLRRLNLQENSLGMDGAIFVASALSENH--GLHHINLQGN 1039

Query: 569  FLTKFGQSA 577
                 G+SA
Sbjct: 1040 ---PIGESA 1045



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/363 (33%), Positives = 186/363 (51%), Gaps = 1/363 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+  ++D+   + G  G   LA++L  N+T   +S  +N I   G+      L SN  + 
Sbjct: 693  RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 752

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L L  N IG  G + + D L  N  ++ L  SS  + D GA A+AE LK N IL  L+L
Sbjct: 753  MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 812

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I   G T L  AL  N T+ SL+L  N     GA AL + L  N +L+ L L  N 
Sbjct: 813  QSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANL 872

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D G +A+   +      L  L +  N I A  A  + + ++  ++L  ++L  N IGD
Sbjct: 873  LHDRGAQAIAVAVGENHS-LTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGD 931

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EGA  +A ALK N T+  + L   +I S+GA A+   L  N  +  LDL  N +GA GAK
Sbjct: 932  EGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAK 991

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA FVA  L  N+ +  ++L+ N + +  A+ +++
Sbjct: 992  ALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISE 1051

Query: 522  SFK 524
            + K
Sbjct: 1052 AIK 1054



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 168/337 (49%), Gaps = 1/337 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G+  +AE+L  NQT   +    N I   G +     L+ N +LK
Sbjct: 721  RTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLK 780

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N IGD G   L + L  N  +E L L S  + D G   +   L +N  L  L L
Sbjct: 781  ALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 840

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G  +L +AL  N+T++ L L  N     GA A+A  +  N SL  LHL  N 
Sbjct: 841  RENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNF 900

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     RAL   L   +  L  LD+  N+I  +GA  VA  +K   +L+ + L +  IG 
Sbjct: 901  IQAGAARALGQALQLNR-TLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGS 959

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            +GA+ + +AL  NRT+  +DL GN++ + GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 960  QGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAI 1019

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  +  ++ + L    IG S A  +++ ++ N
Sbjct: 1020 FVASALSENHGLHHINLQGNPIGESAARMISEAIKTN 1056



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+  ++  S    GD G   LAE+L  NQ  E +   +N I+  G+    
Sbjct: 767  QQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLM 826

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L SN  L +LNL  N I  EG + L   L  N  ++ L L++  L D GA+AIA  + 
Sbjct: 827  RALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVG 886

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N T+ +L L  N  G  GA+++A  L+ N +
Sbjct: 887  ENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTT 946

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG +G +AL   L+  +  L +LD+  N + A GA  +A  +K   SL  
Sbjct: 947  LIALYLQVASIGSQGAQALGEALTVNR-TLEILDLRGNDVGAAGAKALANALKLNSSLRR 1005

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +GA  +A AL +N  +  I+L GN I    A  I+  +K N+   ++++
Sbjct: 1006 LNLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVEI 1064



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 3/249 (1%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           + L L  N   D  +  L S LS +  ++  + +  N I  KGA  +A  +   +SL+ +
Sbjct: 639 QSLRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITL 698

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG  GA+ +ADALK NRT+T++ L  N I   G   +A  L  N  I+ L L  
Sbjct: 699 DLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQK 758

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+ +++ LK + ++  L      IG  GA  +A+ L+ N  +  LDL++N + 
Sbjct: 759 NLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSIS 818

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           D G   L ++    N+ L+S++L  N I  +GA A+ QAL  N    +  L+L  N L  
Sbjct: 819 DMGVTVLMRAL-CSNQTLSSLNLRENSISPEGAQALTQALCRNN--TLKHLDLTANLLHD 875

Query: 573 FGQSALTDA 581
            G  A+  A
Sbjct: 876 RGAQAIAVA 884



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 94/202 (46%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L +          +D++     D G   +A ++G N +   +    N I A   +
Sbjct: 848  EGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAAR 907

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    LQ N  L TL+L  N IGDEG   +   L  N  +  L L    +  +GA+A+ E
Sbjct: 908  ALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGE 967

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L +L+L  N +  +G  +LA AL  NS++R L+L  N  G  GA  +A  L  
Sbjct: 968  ALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSE 1027

Query: 329  NKSLRELHLHGNSIGDEGIRAL 350
            N  L  ++L GN IG+   R +
Sbjct: 1028 NHGLHHINLQGNPIGESAARMI 1049


>gi|60360292|dbj|BAD90390.1| mFLJ00348 protein [Mus musculus]
          Length = 1089

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/429 (34%), Positives = 224/429 (52%), Gaps = 8/429 (1%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L    S+ +    F D  +  L   L G +    ++S A N I   G K
Sbjct: 649  SQHVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAK 708

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L TL+L  N IG  G K L D L  N  +  L L S  ++D+G   +AE
Sbjct: 709  ALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAE 768

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L +N  + +L+L  N+I   G   +A+AL +N ++++L  + N  G  GA ALA+ L+ 
Sbjct: 769  ALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKV 828

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ L  L L  NSI D G+  LM  L S +  L+ L++  NSIS +GA  + + +    +
Sbjct: 829  NQILENLDLQSNSISDMGVTVLMRALCSNQ-TLSSLNLRENSISPEGAQALTQALCRNNT 887

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N + D GA+ IA A+ +N ++T + L  N I +  A A+ + L+ N  +T+L
Sbjct: 888  LKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTL 947

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L  N T+ ILDLR 
Sbjct: 948  DLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRG 1007

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K +N +L  ++L  N +  DGA  +A AL  N    +  +NL  N
Sbjct: 1008 NDVGAAGAKALANALK-LNSSLRRLNLQENSLGMDGAIFVASALSENH--GLHHINLQGN 1064

Query: 569  FLTKFGQSA 577
                 G+SA
Sbjct: 1065 ---PIGESA 1070



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 123/363 (33%), Positives = 186/363 (51%), Gaps = 1/363 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+  ++D+   + G  G   LA++L  N+T   +S  +N I   G+      L SN  + 
Sbjct: 718  RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 777

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L L  N IG  G + + D L  N  ++ L  SS  + D GA A+AE LK N IL  L+L
Sbjct: 778  MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 837

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I   G T L  AL  N T+ SL+L  N     GA AL + L  N +L+ L L  N 
Sbjct: 838  QSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANL 897

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D G +A+   +      L  L +  N I A  A  + + ++  ++L  ++L  N IGD
Sbjct: 898  LHDRGAQAIAVAVGENHS-LTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGD 956

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EGA  +A ALK N T+  + L   +I S+GA A+   L  N  +  LDL  N +GA GAK
Sbjct: 957  EGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAK 1016

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AL+  LK + ++  L L    +G  GA FVA  L  N+ +  ++L+ N + +  A+ +++
Sbjct: 1017 ALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISE 1076

Query: 522  SFK 524
            + K
Sbjct: 1077 AIK 1079



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 168/337 (49%), Gaps = 1/337 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ +      D+G+  +AE+L  NQT   +    N I   G +     L+ N +LK
Sbjct: 746  RTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLK 805

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L  S N IGD G   L + L  N  +E L L S  + D G   +   L +N  L  L L
Sbjct: 806  ALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 865

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N I   G  +L +AL  N+T++ L L  N     GA A+A  +  N SL  LHL  N 
Sbjct: 866  RENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNF 925

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            I     RAL   L   +  L  LD+  N+I  +GA  VA  +K   +L+ + L +  IG 
Sbjct: 926  IQAGAARALGQALQLNR-TLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGS 984

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            +GA+ + +AL  NRT+  +DL GN++ + GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 985  QGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAI 1044

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
             ++  L  +  ++ + L    IG S A  +++ ++ N
Sbjct: 1045 FVASALSENHGLHHINLQGNPIGESAARMISEAIKTN 1081



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 1/299 (0%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            Q + +  K+ R+  ++  S    GD G   LAE+L  NQ  E +   +N I+  G+    
Sbjct: 792  QQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLM 851

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L SN  L +LNL  N I  EG + L   L  N  ++ L L++  L D GA+AIA  + 
Sbjct: 852  RALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVG 911

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I      +L +AL  N T+ +L L  N  G  GA+++A  L+ N +
Sbjct: 912  ENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTT 971

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L  L+L   SIG +G +AL   L+  +  L +LD+  N + A GA  +A  +K   SL  
Sbjct: 972  LIALYLQVASIGSQGAQALGEALTVNR-TLEILDLRGNDVGAAGAKALANALKLNSSLRR 1030

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL  N +G +GA  +A AL +N  +  I+L GN I    A  I+  +K N+   ++++
Sbjct: 1031 LNLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVEI 1089



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 3/249 (1%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           + L L  N   D  +  L S LS +  ++  + +  N I  KGA  +A  +   +SL+ +
Sbjct: 664 QSLRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITL 723

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG  GA+ +ADALK NRT+T++ L  N I   G   +A  L  N  I+ L L  
Sbjct: 724 DLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQK 783

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+ +++ LK + ++  L      IG  GA  +A+ L+ N  +  LDL++N + 
Sbjct: 784 NLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSIS 843

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           D G   L ++    N+ L+S++L  N I  +GA A+ QAL  N    +  L+L  N L  
Sbjct: 844 DMGVTVLMRAL-CSNQTLSSLNLRENSISPEGAQALTQALCRNN--TLKHLDLTANLLHD 900

Query: 573 FGQSALTDA 581
            G  A+  A
Sbjct: 901 RGAQAIAVA 909



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 94/202 (46%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  Q L +          +D++     D G   +A ++G N +   +    N I A   +
Sbjct: 873  EGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAAR 932

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    LQ N  L TL+L  N IGDEG   +   L  N  +  L L    +  +GA+A+ E
Sbjct: 933  ALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGE 992

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             L  N  L +L+L  N +  +G  +LA AL  NS++R L+L  N  G  GA  +A  L  
Sbjct: 993  ALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSE 1052

Query: 329  NKSLRELHLHGNSIGDEGIRAL 350
            N  L  ++L GN IG+   R +
Sbjct: 1053 NHGLHHINLQGNPIGESAARMI 1074


>gi|332845208|ref|XP_001167492.2| PREDICTED: protein NLRC3 [Pan troglodytes]
          Length = 1057

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 152/453 (33%), Positives = 222/453 (49%), Gaps = 53/453 (11%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L GN IG +G                            +KA+A+
Sbjct: 685  ALARSLLVNRSLTSLDLRGNSIGPQG----------------------------SKALAD 716

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             LK N  L  L L  N +   G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ 
Sbjct: 717  ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ 776

Query: 329  NKSLREL----------HLHG----------NSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            N+SL+EL          H  G          NSI D G+ ALM  L + +  L+ L +  
Sbjct: 777  NRSLKELMAAPSGSWDSHTQGASSSFRSLQSNSISDAGVAALMGALCTNQTLLS-LSLRE 835

Query: 369  NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
            NSIS +GA  +A  ++   +L  ++L  N + D+GA  IA A+++NRT+T++ L  N I 
Sbjct: 836  NSISPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQ 895

Query: 429  SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            +  A A+ + L+ N  +TSLDL  N IG DGA A++  LK +  +  L L    IGASGA
Sbjct: 896  AGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGA 955

Query: 489  EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
            + + + L  N T+ ILDLR N +   GAK LA + K VN +L  ++L  N +  DGA  I
Sbjct: 956  QVLGEALAVNRTLEILDLRGNAIGVAGAKALAHALK-VNSSLRRLNLQENSLGMDGAICI 1014

Query: 549  AQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            A AL  N    +  +NL  N +   G   +++A
Sbjct: 1015 ATALSGNHR--LQHINLQGNHIGDSGARMISEA 1045



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 164/337 (48%), Gaps = 21/337 (6%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+ + G    D+G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 722  RTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLK 781

Query: 222  TL--------------------NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
             L                    +L  N I D GV  L   L  N  +  L L    +  E
Sbjct: 782  ELMAAPSGSWDSHTQGASSSFRSLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPE 841

Query: 262  GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
            GA+AIA  L+ NS L+ L+L  N++   G  ++A A+ EN T+ SLHL  N+  A  A A
Sbjct: 842  GAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQA 901

Query: 322  LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            L + L+ N+SL  L L  N+IGD+G  A+   L      L  L +   SI A GA  + E
Sbjct: 902  LGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTA-LTALYLQVASIGASGAQVLGE 960

Query: 382  YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
             +   ++L  ++L  N IG  GA+ +A ALK N ++  ++L  N++   GA  IA  L  
Sbjct: 961  ALAVNRTLEILDLRGNAIGVAGAKALAHALKVNSSLRRLNLQENSLGMDGAICIATALSG 1020

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            N  +  ++L  N IG  GA+ +SE +K +    T+++
Sbjct: 1021 NHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1057


>gi|320170766|gb|EFW47665.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 459

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 183/333 (54%), Gaps = 35/333 (10%)

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           +L   ++ D GAKAIAE L+ N+++  L+L  N ID +G  ++AE L  N+T        
Sbjct: 4   RLPEEEIGDAGAKAIAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTT-------- 55

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
                               L EL L+GN IGD G R +   L      +  L +  N I
Sbjct: 56  --------------------LTELFLYGNQIGDAGARTIAETLKVNT-SVTSLGLSENQI 94

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
              GA  +AE +K   +L W+NL  N IGD GA  IA+ALK N T+TT+DLG N I   G
Sbjct: 95  ---GANAIAEALKVNATLTWLNLGDNQIGDAGARAIAEALKVNTTVTTLDLGKNQIGDAG 151

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A AIA  LK N+ +T L L  N IG  GA+A++E LK +  ++ L LG  +I  +GA  +
Sbjct: 152 AQAIAEALKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDNRISDAGATPI 211

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
           A+ L+ N T++ LDL  N + + G   +A++ K VN +LT  +L  N+I D+GA AIA+A
Sbjct: 212 AEALKVNTTLTALDLGKNQIGNLGMMAIAEALK-VNTSLTEHNLNVNQIGDEGAKAIAEA 270

Query: 552 LKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           LK N   +V  LNLA N + K    A+ DA+ L
Sbjct: 271 LKVN--TSVKKLNLAFNCIGKVAAQAIQDARPL 301



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/336 (36%), Positives = 180/336 (53%), Gaps = 11/336 (3%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L    IGD G K + + L  NA V  L L    + D GA+ IAE LK N+ L  L L  N
Sbjct: 5   LPEEEIGDAGAKAIAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTTLTELFLYGN 64

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  ++AE L  N+++ SL L+ N    +GANA+A+ L+ N +L  L+L  N IGD
Sbjct: 65  QIGDAGARTIAETLKVNTSVTSLGLSENQ---IGANAIAEALKVNATLTWLNLGDNQIGD 121

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G RA+   L      +  LD+G N I   GA  +AE +K   ++  + L  N IG+ GA
Sbjct: 122 AGARAIAEALKVNT-TVTTLDLGKNQIGDAGAQAIAEALKVNTTVTRLYLDQNQIGEAGA 180

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + IA+ LK N+T++ + LG N I   GA+ IA  LK N+ +T+LDL  N IG  G  A++
Sbjct: 181 QAIAETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIA 240

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           E LK + ++    L   QIG  GA+ +A+ L+ N ++  L+L  N +     K  AQ+  
Sbjct: 241 EALKVNTSLTEHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCI----GKVAAQA-- 294

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
            + +A    +L  N   +  AFA+   L   ED+ +
Sbjct: 295 -IQDARPLTELKLNYQINPLAFALRPRLATAEDLQI 329



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 116/308 (37%), Positives = 164/308 (53%), Gaps = 9/308 (2%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE+L  N     +    N I  AG +     L+ N  L  L L GN IGD 
Sbjct: 10  IGDAGAKAIAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTTLTELFLYGNQIGDA 69

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  V  L LS   +   GA AIAE LK N+ L  L L +N I  +G  +
Sbjct: 70  GARTIAETLKVNTSVTSLGLSENQI---GANAIAEALKVNATLTWLNLGDNQIGDAGARA 126

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AEAL  N+T+ +L L  N  G  GA A+A+ L+ N ++  L+L  N IG+ G +A+   
Sbjct: 127 IAEALKVNTTVTTLDLGKNQIGDAGAQAIAEALKVNTTVTRLYLDQNQIGEAGAQAIAET 186

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L   K  L+ L +G+N IS  GA  +AE +K   +L  ++L  N IG+ G   IA+ALK 
Sbjct: 187 LKVNK-TLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEALKV 245

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV-----LK 468
           N ++T  +L  N I  +GA AIA  LK N+ +  L+LA+N IG   A+A+ +      LK
Sbjct: 246 NTSLTEHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQAIQDARPLTELK 305

Query: 469 FHGNINTL 476
            +  IN L
Sbjct: 306 LNYQINPL 313



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/289 (37%), Positives = 155/289 (53%), Gaps = 4/289 (1%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG KA    L+ N  +  L+L  N I D G + + + L  N  +  L L    + D GA+
Sbjct: 13  AGAKAIAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTTLTELFLYGNQIGDAGAR 72

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            IAE LK N+ +  L L+ N I   G  ++AEAL  N+T+  L+L  N  G  GA A+A+
Sbjct: 73  TIAETLKVNTSVTSLGLSENQI---GANAIAEALKVNATLTWLNLGDNQIGDAGARAIAE 129

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L+ N ++  L L  N IGD G +A+   L      +  L +  N I   GA  +AE +K
Sbjct: 130 ALKVNTTVTTLDLGKNQIGDAGAQAIAEALKVNT-TVTRLYLDQNQIGEAGAQAIAETLK 188

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             K+L  + L  N I D GA  IA+ALK N T+T +DLG N I + G  AIA  LK N+ 
Sbjct: 189 VNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEALKVNTS 248

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           +T  +L  N IG +GAKA++E LK + ++  L L +  IG   A+ + D
Sbjct: 249 LTEHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQAIQD 297



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/304 (36%), Positives = 156/304 (51%), Gaps = 13/304 (4%)

Query: 157 FAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            A+ LR  + V   D+      D G   +AE+L  N T  E+    N I  AG +     
Sbjct: 18  IAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTTLTELFLYGNQIGDAGARTIAET 77

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N ++ +L LS N I   G   + + L  NA +  L L    + D GA+AIAE LK N
Sbjct: 78  LKVNTSVTSLGLSENQI---GANAIAEALKVNATLTWLNLGDNQIGDAGARAIAEALKVN 134

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + +  L+L  N I  +G  ++AEAL  N+T+  L+L+ N  G  GA A+A+ L+ NK+L 
Sbjct: 135 TTVTTLDLGKNQIGDAGAQAIAEALKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLS 194

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL+L  N I D G   +   L      L  LD+G N I   G   +AE +K   SL   N
Sbjct: 195 ELYLGDNRISDAGATPIAEALKVNT-TLTALDLGKNQIGNLGMMAIAEALKVNTSLTEHN 253

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY- 452
           L +N IGDEGA+ IA+ALK N ++  ++L  N I    A AI    +D   +T L L Y 
Sbjct: 254 LNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQAI----QDARPLTELKLNYQ 309

Query: 453 -NPI 455
            NP+
Sbjct: 310 INPL 313



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 116/193 (60%), Gaps = 6/193 (3%)

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           +IGD GA+ IA+AL+ N  +T +DLG N I   GA  IA  LK N+ +T L L  N IG 
Sbjct: 9   EIGDAGAKAIAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTTLTELFLYGNQIGD 68

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
            GA+ ++E LK + ++ +L L   QIGA+    +A+ L+ N T++ L+L  N + D GA+
Sbjct: 69  AGARTIAETLKVNTSVTSLGLSENQIGANA---IAEALKVNATLTWLNLGDNQIGDAGAR 125

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 577
            +A++ K VN  +T++DL  N+I D GA AIA+ALK N    VT L L  N + + G  A
Sbjct: 126 AIAEALK-VNTTVTTLDLGKNQIGDAGAQAIAEALKVN--TTVTRLYLDQNQIGEAGAQA 182

Query: 578 LTDAKDLVYEMSE 590
           + +   +   +SE
Sbjct: 183 IAETLKVNKTLSE 195



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 4/259 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +T+ E  K     + + + G   GD G   +AE+L  N +   +  + N I   G  A  
Sbjct: 44  RTIAETLKVNTTLTELFLYGNQIGDAGARTIAETLKVNTSVTSLGLSENQI---GANAIA 100

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNL  N IGD G + + + L  N  V  L L    + D GA+AIAE LK
Sbjct: 101 EALKVNATLTWLNLGDNQIGDAGARAIAEALKVNTTVTTLDLGKNQIGDAGAQAIAEALK 160

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ +  L L+ N I  +G  ++AE L  N T+  L+L  N     GA  +A+ L+ N +
Sbjct: 161 VNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTT 220

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L L  N IG+ G+ A+   L      L   ++  N I  +GA  +AE +K   S+  
Sbjct: 221 LTALDLGKNQIGNLGMMAIAEALKVNT-SLTEHNLNVNQIGDEGAKAIAEALKVNTSVKK 279

Query: 392 INLYMNDIGDEGAEKIADA 410
           +NL  N IG   A+ I DA
Sbjct: 280 LNLAFNCIGKVAAQAIQDA 298


>gi|320165782|gb|EFW42681.1| hypothetical protein CAOG_07813 [Capsaspora owczarzaki ATCC 30864]
          Length = 334

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 128/307 (41%), Positives = 174/307 (56%), Gaps = 2/307 (0%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +L L    + DE AKAIAE LK N  L  L+L+NN I   G  + AEAL  N  +  + L
Sbjct: 24  QLNLERRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRL 83

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N  G +GA A+AK L+ N +L  L+L  N +GD G +A+   L      L  L +  N
Sbjct: 84  WANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNT-TLPKLYLREN 142

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            I   GA  +AE +K  K+L  ++LY N IGD GA+ IA+ALK N+T+T + L  N I  
Sbjct: 143 QIGDVGAQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGD 202

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA AIA  LK N+ +  L L  N IG  GA A++E LK +  +  L L   QIG  GA+
Sbjct: 203 VGAQAIAEALKVNTTLKQLYLWQNQIGDVGANAIAEALKVNKTLTRLDLYKNQIGDVGAQ 262

Query: 490 FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
            +A+ L+ N T+  L L  N + D GA+ +A++  V N  LT + L  N+I D GA AIA
Sbjct: 263 AIAESLKANTTLGTLSLGDNQIGDAGAQAIAEALNV-NTTLTELYLGENQIGDVGAQAIA 321

Query: 550 QALKANE 556
           +ALK N+
Sbjct: 322 EALKVNK 328



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/311 (40%), Positives = 179/311 (57%), Gaps = 2/311 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL    IGDE  K + + L  N  +  L L +  + D GA A AE LK N  L  + L 
Sbjct: 25  LNLERRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRLW 84

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G  ++A+AL  N+T+ +L+L  N  G  GA A+A+ L+ N +L +L+L  N I
Sbjct: 85  ANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQI 144

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A+   L   K  L  L +  N I   GA  +AE +K  K+L  ++L+ N IGD 
Sbjct: 145 GDVGAQAIAEALKVNK-TLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGDV 203

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N T+  + L  N I   GA+AIA  LK N  +T LDL  N IG  GA+A
Sbjct: 204 GAQAIAEALKVNTTLKQLYLWQNQIGDVGANAIAEALKVNKTLTRLDLYKNQIGDVGAQA 263

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           ++E LK +  + TL LG  QIG +GA+ +A+ L  N T++ L L  N + D GA+ +A++
Sbjct: 264 IAESLKANTTLGTLSLGDNQIGDAGAQAIAEALNVNTTLTELYLGENQIGDVGAQAIAEA 323

Query: 523 FKVVNEALTSI 533
            K VN+ LT++
Sbjct: 324 LK-VNKTLTTL 333



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/331 (37%), Positives = 176/331 (53%), Gaps = 2/331 (0%)

Query: 147 FRESKQTLNEFAKELR-AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           ++   Q   +F  +++ A   +++  R  GDE    +AE+L  N+T   +    N I   
Sbjct: 4   YQNMNQRQRQFYDQVKNASGQLNLERRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDV 63

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G  AF   L+ N AL  + L  N IG+ G + +   L  N  +  L L    L D GA+A
Sbjct: 64  GALAFAEALKVNKALAEIRLWANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQA 123

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           IAE L+ N+ L  L L  N I   G  ++AEAL  N T+ +L L  N  G +GA A+A+ 
Sbjct: 124 IAEALQVNTTLPKLYLRENQIGDVGAQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEA 183

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ NK+L EL L  N IGD G +A+   L      L  L +  N I   GA  +AE +K 
Sbjct: 184 LKVNKTLTELSLWQNQIGDVGAQAIAEALKVNT-TLKQLYLWQNQIGDVGANAIAEALKV 242

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            K+L  ++LY N IGD GA+ IA++LK N T+ T+ LG N I   GA AIA  L  N+ +
Sbjct: 243 NKTLTRLDLYKNQIGDVGAQAIAESLKANTTLGTLSLGDNQIGDAGAQAIAEALNVNTTL 302

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           T L L  N IG  GA+A++E LK +  + TL
Sbjct: 303 TELYLGENQIGDVGAQAIAEALKVNKTLTTL 333



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/272 (38%), Positives = 155/272 (56%), Gaps = 4/272 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A A+A+ L+ NK+L  L LH N IGD G  A    L   K  LA + +  N I   GA  
Sbjct: 37  AKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKA-LAEIRLWANQIGEVGAQA 95

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A+ +K   +L  + L  N +GD GA+ IA+AL+ N T+  + L  N I   GA AIA  
Sbjct: 96  IAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQIGDVGAQAIAEA 155

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK N  +T+L L  N IG  GA+A++E LK +  +  L L   QIG  GA+ +A+ L+ N
Sbjct: 156 LKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGDVGAQAIAEALKVN 215

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            T+  L L  N + D GA  +A++ KV N+ LT +DL  N+I D GA AIA++LKAN   
Sbjct: 216 TTLKQLYLWQNQIGDVGANAIAEALKV-NKTLTRLDLYKNQIGDVGAQAIAESLKAN--T 272

Query: 559 AVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
            + +L+L +N +   G  A+ +A ++   ++E
Sbjct: 273 TLGTLSLGDNQIGDAGAQAIAEALNVNTTLTE 304



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 79/169 (46%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           LS +  ++     Q + E  K  +  + + +     GD G   +AE+L  N T +++   
Sbjct: 165 LSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGDVGAQAIAEALKVNTTLKQLYLW 224

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G  A    L+ N  L  L+L  N IGD G + + + L  N  +  L L    +
Sbjct: 225 QNQIGDVGANAIAEALKVNKTLTRLDLYKNQIGDVGAQAIAESLKANTTLGTLSLGDNQI 284

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            D GA+AIAE L  N+ L  L L  N I   G  ++AEAL  N T+ +L
Sbjct: 285 GDAGAQAIAEALNVNTTLTELYLGENQIGDVGAQAIAEALKVNKTLTTL 333


>gi|46446975|ref|YP_008340.1| hypothetical protein pc1341 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46400616|emb|CAF24065.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1764

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/402 (34%), Positives = 200/402 (49%), Gaps = 2/402 (0%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A  S+ +      D G    A +L  N T + +    N I+  G +A    L SN AL+ 
Sbjct: 1359 ALRSLRLQNNQISDRGAEAFARALASNATLKALWLDNNQISNEGAEAIAQALASNTALRE 1418

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L L  N I D+G + +   L  N  +E L L +  +  +G KA+ + L  N+ L+V+ LN
Sbjct: 1419 LYLGNNQISDKGTEAIAQALASNTTLETLWLDNNQISFKGVKALVQSLAFNTTLKVIHLN 1478

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +N I   G  ++A+AL  N+T++ L L  N     G   + K L  N  LR L+L  N I
Sbjct: 1479 SNKISDEGAEAIAQALASNTTLKILDLGNNQISDKGGKEIGKALAFNTVLRRLYLRNNQI 1538

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
             DEG  A+   L+S    L  L + NN IS KG   + + + +   L  ++L  N I ++
Sbjct: 1539 SDEGAEAIAQALAS-NTTLETLWLDNNQISFKGVKALVQSLASNTVLENLSLNGNQISNK 1597

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            G E +A AL  NR +  I L GN I  +G  A AR L  N+ +  L L  N I   GA A
Sbjct: 1598 GMEALAQALASNRKLREISLNGNQISDEGMEAFARALTSNTALKVLHLGSNQISDKGAGA 1657

Query: 463  LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
            L++ L  +  +  L LG  QI   GAE +A     N  +  L L+ N + DEGAK +AQ+
Sbjct: 1658 LAQALASNTALRELYLGDNQINDKGAETIAQAFASNTKLETLSLKGNQISDEGAKAIAQA 1717

Query: 523  FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            F   N  L ++ L  N I D+GA AIAQA  +N ++     N
Sbjct: 1718 F-ASNTKLETLSLRGNLISDEGAKAIAQAFASNTNLKTIYFN 1758



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/413 (33%), Positives = 205/413 (49%), Gaps = 32/413 (7%)

Query: 197  FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
            F+  GI     +     L  N AL++L L  N I D G +     L  NA ++ L L + 
Sbjct: 1337 FSRVGINDKEAEIIANALALNTALRSLRLQNNQISDRGAEAFARALASNATLKALWLDNN 1396

Query: 257  DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
             + +EGA+AIA+ L +N+ LR L L NN I   G  ++A+AL  N+T+ +L L+ N    
Sbjct: 1397 QISNEGAEAIAQALASNTALRELYLGNNQISDKGTEAIAQALASNTTLETLWLDNNQISF 1456

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
             G  AL + L  N +L+ +HL+ N I DEG  A+   L+S    L +LD+GNN IS KG 
Sbjct: 1457 KGVKALVQSLAFNTTLKVIHLNSNKISDEGAEAIAQALAS-NTTLKILDLGNNQISDKGG 1515

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
              + + +     L  + L  N I DEGAE IA AL  N T+ T+ L  N I  KG  A+ 
Sbjct: 1516 KEIGKALAFNTVLRRLYLRNNQISDEGAEAIAQALASNTTLETLWLDNNQISFKGVKALV 1575

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            + L  N+V+ +L L  N I   G +AL++ L  +  +  + L   QI   G E  A  L 
Sbjct: 1576 QSLASNTVLENLSLNGNQISNKGMEALAQALASNRKLREISLNGNQISDEGMEAFARALT 1635

Query: 497  YNNTISILDLRAN------------------GLR----------DEGAKCLAQSFKVVNE 528
             N  + +L L +N                   LR          D+GA+ +AQ+F   N 
Sbjct: 1636 SNTALKVLHLGSNQISDKGAGALAQALASNTALRELYLGDNQINDKGAETIAQAF-ASNT 1694

Query: 529  ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             L ++ L  N+I D+GA AIAQA  +N    + +L+L  N ++  G  A+  A
Sbjct: 1695 KLETLSLKGNQISDEGAKAIAQAFASN--TKLETLSLRGNLISDEGAKAIAQA 1745



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/331 (36%), Positives = 175/331 (52%), Gaps = 4/331 (1%)

Query: 238  LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
            L  + ++++G   L  S V + D+ A+ IA  L  N+ LR L L NN I   G  + A A
Sbjct: 1322 LFQLYMNDSGTIALGFSRVGINDKEAEIIANALALNTALRSLRLQNNQISDRGAEAFARA 1381

Query: 298  LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            L  N+T+++L L+ N     GA A+A+ L  N +LREL+L  N I D+G  A+   L+S 
Sbjct: 1382 LASNATLKALWLDNNQISNEGAEAIAQALASNTALRELYLGNNQISDKGTEAIAQALAS- 1440

Query: 358  KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
               L  L + NN IS KG   + + +    +L  I+L  N I DEGAE IA AL  N T+
Sbjct: 1441 NTTLETLWLDNNQISFKGVKALVQSLAFNTTLKVIHLNSNKISDEGAEAIAQALASNTTL 1500

Query: 418  TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
              +DLG N I  KG   I + L  N+V+  L L  N I  +GA+A+++ L  +  + TL 
Sbjct: 1501 KILDLGNNQISDKGGKEIGKALAFNTVLRRLYLRNNQISDEGAEAIAQALASNTTLETLW 1560

Query: 478  LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
            L   QI   G + +   L  N  +  L L  N + ++G + LAQ+    N  L  I L  
Sbjct: 1561 LDNNQISFKGVKALVQSLASNTVLENLSLNGNQISNKGMEALAQAL-ASNRKLREISLNG 1619

Query: 538  NEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N+I D+G  A A+AL +N   A+  L+L +N
Sbjct: 1620 NQISDEGMEAFARALTSN--TALKVLHLGSN 1648



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 129/259 (49%), Gaps = 1/259 (0%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+      D+G   + ++L +N     +    N I+  G +A    L SN  L+TL L 
Sbjct: 1503 LDLGNNQISDKGGKEIGKALAFNTVLRRLYLRNNQISDEGAEAIAQALASNTTLETLWLD 1562

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N I  +GVK L   L  N  +E L L+   + ++G +A+A+ L +N  LR + LN N I
Sbjct: 1563 NNQISFKGVKALVQSLASNTVLENLSLNGNQISNKGMEALAQALASNRKLREISLNGNQI 1622

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
               G  + A AL  N+ ++ LHL  N     GA ALA+ L  N +LREL+L  N I D+G
Sbjct: 1623 SDEGMEAFARALTSNTALKVLHLGSNQISDKGAGALAQALASNTALRELYLGDNQINDKG 1682

Query: 347  IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
               +    +S   KL  L +  N IS +GA  +A+   +   L  ++L  N I DEGA+ 
Sbjct: 1683 AETIAQAFAS-NTKLETLSLKGNQISDEGAKAIAQAFASNTKLETLSLRGNLISDEGAKA 1741

Query: 407  IADALKQNRTITTIDLGGN 425
            IA A   N  + TI    N
Sbjct: 1742 IAQAFASNTNLKTIYFNNN 1760


>gi|164562267|gb|ABY61045.1| nucleotide-binding oligomerization domain containing 3 [Sus scrofa]
          Length = 377

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/347 (38%), Positives = 199/347 (57%), Gaps = 2/347 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N +L TL+L  N IG +G K L D L  N  +    L S  +RD+GA+A+AE L  N  L
Sbjct: 5   NRSLTTLDLHSNSIGPQGAKALADALKINRTLAFRSLQSNAIRDDGARALAEALAANRTL 64

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
            VL L +N +   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ N+ L+ L 
Sbjct: 65  SVLHLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGAKALAEALKVNQGLKSLD 124

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  NSI D G+ ALM+ L + +  L+ L++  NSIS  GA  +A  +    +L  ++L  
Sbjct: 125 LQSNSISDTGVAALMAALCTNQTLLS-LNLRENSISPDGAQDLARALCTNSTLKSLDLTA 183

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N + D+GA+ IA A+++NR +T++ L  N I +  A A+ + L+ N+ +TSLDL  N IG
Sbjct: 184 NLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQENAIG 243

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            +GA A++  LK +  +  L L    +GA GA+ + + L  N T+ ILDLR N +   GA
Sbjct: 244 DEGASAVAIALKANTTLTALYLQVASVGALGAQALGEALAVNRTLEILDLRGNAIGVAGA 303

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           K LA + K VN +L  ++L  N +  DGA  +A AL  N  +   SL
Sbjct: 304 KALANALK-VNSSLRRLNLQENSLGMDGAICVATALSGNHGLQHISL 349



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 191/364 (52%), Gaps = 1/364 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ +++D+   + G +G   LA++L  N+T    S  +N I   G +A    L +N  L 
Sbjct: 6   RSLTTLDLHSNSIGPQGAKALADALKINRTLAFRSLQSNAIRDDGARALAEALAANRTLS 65

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L  N +G  G + + D L  N  +++L  SS  + D GAKA+AE LK N  L+ L+L
Sbjct: 66  VLHLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGAKALAEALKVNQGLKSLDL 125

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I  +G  +L  AL  N T+ SL+L  N     GA  LA+ L  N +L+ L L  N 
Sbjct: 126 QSNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARALCTNSTLKSLDLTANL 185

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D+G +A+   +   +  L  L +  N I A  A  + + ++   SL  ++L  N IGD
Sbjct: 186 LHDQGAQAIAVAVRENRA-LTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQENAIGD 244

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA  +A ALK N T+T + L   ++ + GA A+   L  N  +  LDL  N IG  GAK
Sbjct: 245 EGASAVAIALKANTTLTALYLQVASVGALGAQALGEALAVNRTLEILDLRGNAIGVAGAK 304

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           AL+  LK + ++  L L    +G  GA  VA  L  N+ +  + L+ N + + GA+ +++
Sbjct: 305 ALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQHISLQGNHIGESGARMISE 364

Query: 522 SFKV 525
           + K 
Sbjct: 365 AIKT 368



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 125/371 (33%), Positives = 193/371 (52%), Gaps = 2/371 (0%)

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           SL  N++   +   +N I   G KA    L+ N  L   +L  N I D+G + L + L  
Sbjct: 1   SLLVNRSLTTLDLHSNSIGPQGAKALADALKINRTLAFRSLQSNAIRDDGARALAEALAA 60

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  +  L L S  +   G + IA+ LK N  L+ L  ++N I   G  +LAEAL  N  +
Sbjct: 61  NRTLSVLHLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGAKALAEALKVNQGL 120

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           +SL L  N     G  AL   L  N++L  L+L  NSI  +G + L   L +    L  L
Sbjct: 121 KSLDLQSNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARALCTNS-TLKSL 179

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+  N +  +GA  +A  ++  ++L  ++L  N I    A+ +  AL+ N ++T++DL  
Sbjct: 180 DLTANLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQE 239

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N I  +GASA+A  LK N+ +T+L L    +GA GA+AL E L  +  +  L L    IG
Sbjct: 240 NAIGDEGASAVAIALKANTTLTALYLQVASVGALGAQALGEALAVNRTLEILDLRGNAIG 299

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
            +GA+ +A+ L+ N+++  L+L+ N L  +GA C+A +    N  L  I L  N I + G
Sbjct: 300 VAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALS-GNHGLQHISLQGNHIGESG 358

Query: 545 AFAIAQALKAN 555
           A  I++A+K N
Sbjct: 359 ARMISEAIKTN 369



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 161/323 (49%), Gaps = 1/323 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+G   LAE+L  N+T   +   +N +   G +     L+ N +LK L  S N IGD G 
Sbjct: 48  DDGARALAEALAANRTLSVLHLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGA 107

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K L + L  N G++ L L S  + D G  A+   L  N  L  L L  N I   G   LA
Sbjct: 108 KALAEALKVNQGLKSLDLQSNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLA 167

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
            AL  NST++SL L  N     GA A+A  +  N++L  LHL  N I     +AL   L 
Sbjct: 168 RALCTNSTLKSLDLTANLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQ 227

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                L  LD+  N+I  +GA  VA  +K   +L  + L +  +G  GA+ + +AL  NR
Sbjct: 228 LNT-SLTSLDLQENAIGDEGASAVAIALKANTTLTALYLQVASVGALGAQALGEALAVNR 286

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
           T+  +DL GN I   GA A+A  LK NS +  L+L  N +G DGA  ++  L  +  +  
Sbjct: 287 TLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQH 346

Query: 476 LKLGWCQIGASGAEFVADMLRYN 498
           + L    IG SGA  +++ ++ N
Sbjct: 347 ISLQGNHIGESGARMISEAIKTN 369



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 3/224 (1%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  LD+ +NSI  +GA  +A+ +K  ++L + +L  N I D+GA  +A+AL  NRT++ +
Sbjct: 8   LTTLDLHSNSIGPQGAKALADALKINRTLAFRSLQSNAIRDDGARALAEALAANRTLSVL 67

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L  N +   G   IA  LK N  +  L  + N IG  GAKAL+E LK +  + +L L  
Sbjct: 68  HLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGAKALAEALKVNQGLKSLDLQS 127

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
             I  +G   +   L  N T+  L+LR N +  +GA+ LA++    N  L S+DL  N +
Sbjct: 128 NSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARAL-CTNSTLKSLDLTANLL 186

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
            D GA AIA A++  E+ A+TSL+L  NF+      AL  A  L
Sbjct: 187 HDQGAQAIAVAVR--ENRALTSLHLQWNFIQAGAAKALGQALQL 228



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 94/168 (55%), Gaps = 3/168 (1%)

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           NR++TT+DL  N+I  +GA A+A  LK N  +    L  N I  DGA+AL+E L  +  +
Sbjct: 5   NRSLTTLDLHSNSIGPQGAKALADALKINRTLAFRSLQSNAIRDDGARALAEALAANRTL 64

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
           + L L    +G  G +++AD L+ N ++  L   +N + D GAK LA++ K VN+ L S+
Sbjct: 65  SVLHLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGAKALAEALK-VNQGLKSL 123

Query: 534 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           DL  N I D G  A+  AL  N+   + SLNL  N ++  G   L  A
Sbjct: 124 DLQSNSISDTGVAALMAALCTNQ--TLLSLNLRENSISPDGAQDLARA 169


>gi|320170828|gb|EFW47727.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 789

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 142/430 (33%), Positives = 220/430 (51%), Gaps = 32/430 (7%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           ++ S+D    + GD+ +  LAE+L  +     ++ ++N I   G  +    L  N  L  
Sbjct: 21  SYGSLDYENEDIGDDLVAALAEALKGHPAVTSLNLSSNEIGIYGACSIGEALHENNVLTK 80

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+  N IG  G K +   L  N  ++ L L   DL + GA+ +A  LK N+ L  L+L 
Sbjct: 81  LNMGHNQIGAPGAKAIAGGLKSNRTLQALLLEECDLGNNGAQTLASALKVNTSLTRLDLR 140

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  SG +++A +L  N+T+ SL L+GN+    G  A+A  L+ N +L  L L    I
Sbjct: 141 FNGIGDSGASAIARSLYFNNTLTSLDLSGNFFELAGVQAIAGALQANTTLSVLFLEQCRI 200

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            D   +A+ S L   +G                             L +++L  N IGD 
Sbjct: 201 TDAEAQAIASALKVNRG-----------------------------LTYLDLQRNQIGDV 231

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N+T+TTI L  N I   GA AIA  LK N  +  L L  N  GA G ++
Sbjct: 232 GAQSIAEALKVNKTLTTIHLLHNQIGVLGAQAIAETLKVNKALCVLFLRENRFGAAGTQS 291

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           + + L  +  +  L L     G + A+ +A++L+ N T++ L L+ + + D GA  +A++
Sbjct: 292 IIQALGTNRTLERLSLSCNHAGDAEAQAIAEVLKVNKTLTHLYLKDSLIGDTGALSIAET 351

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 582
            KV +  L  ++L  NEI D GA AIA+ALK N+ +   +L L+ NFLTK G +AL  + 
Sbjct: 352 LKV-SSTLRFLNLFNNEITDTGALAIAKALKVNKSLG--TLILSKNFLTKAGITALRQSG 408

Query: 583 DLVYEMSEKE 592
           +   E+ +K+
Sbjct: 409 NPSCEVDDKD 418



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 177/369 (47%), Gaps = 1/369 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K   A +S+++S    G  G   + E+L  N    +++   N I A G KA  G 
Sbjct: 40  LAEALKGHPAVTSLNLSSNEIGIYGACSIGEALHENNVLTKLNMGHNQIGAPGAKAIAGG 99

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+SN  L+ L L    +G+ G + L   L  N  + RL L    + D GA AIA  L  N
Sbjct: 100 LKSNRTLQALLLEECDLGNNGAQTLASALKVNTSLTRLDLRFNGIGDSGASAIARSLYFN 159

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L  L+L+ N  + +G  ++A AL  N+T+  L L         A A+A  L+ N+ L 
Sbjct: 160 NTLTSLDLSGNFFELAGVQAIAGALQANTTLSVLFLEQCRITDAEAQAIASALKVNRGLT 219

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L  N IGD G +++   L   K  L  + + +N I   GA  +AE +K  K+L  + 
Sbjct: 220 YLDLQRNQIGDVGAQSIAEALKVNK-TLTTIHLLHNQIGVLGAQAIAETLKVNKALCVLF 278

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N  G  G + I  AL  NRT+  + L  N+     A AIA VLK N  +T L L  +
Sbjct: 279 LRENRFGAAGTQSIIQALGTNRTLERLSLSCNHAGDAEAQAIAEVLKVNKTLTHLYLKDS 338

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA +++E LK    +  L L   +I  +GA  +A  L+ N ++  L L  N L  
Sbjct: 339 LIGDTGALSIAETLKVSSTLRFLNLFNNEITDTGALAIAKALKVNKSLGTLILSKNFLTK 398

Query: 514 EGAKCLAQS 522
            G   L QS
Sbjct: 399 AGITALRQS 407



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 139/284 (48%), Gaps = 1/284 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           QTL    K   + + +D+     GD G   +A SL +N T   +  + N    AG++A  
Sbjct: 122 QTLASALKVNTSLTRLDLRFNGIGDSGASAIARSLYFNNTLTSLDLSGNFFELAGVQAIA 181

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           G LQ+N  L  L L    I D   + +   L  N G+  L L    + D GA++IAE LK
Sbjct: 182 GALQANTTLSVLFLEQCRITDAEAQAIASALKVNRGLTYLDLQRNQIGDVGAQSIAEALK 241

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  + L +N I   G  ++AE L  N  +  L L  N  GA G  ++ + L  N++
Sbjct: 242 VNKTLTTIHLLHNQIGVLGAQAIAETLKVNKALCVLFLRENRFGAAGTQSIIQALGTNRT 301

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L L  N  GD   +A+   L   K  L  L + ++ I   GA  +AE +K   +L +
Sbjct: 302 LERLSLSCNHAGDAEAQAIAEVLKVNK-TLTHLYLKDSLIGDTGALSIAETLKVSSTLRF 360

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           +NL+ N+I D GA  IA ALK N+++ T+ L  N +   G +A+
Sbjct: 361 LNLFNNEITDTGALAIAKALKVNKSLGTLILSKNFLTKAGITAL 404



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 105/175 (60%), Gaps = 1/175 (0%)

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
           C S   ++    DIGD+    +A+ALK +  +T+++L  N I   GA +I   L +N+V+
Sbjct: 19  CDSYGSLDYENEDIGDDLVAALAEALKGHPAVTSLNLSSNEIGIYGACSIGEALHENNVL 78

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           T L++ +N IGA GAKA++  LK +  +  L L  C +G +GA+ +A  L+ N +++ LD
Sbjct: 79  TKLNMGHNQIGAPGAKAIAGGLKSNRTLQALLLEECDLGNNGAQTLASALKVNTSLTRLD 138

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           LR NG+ D GA  +A+S    N  LTS+DL+ N     G  AIA AL+AN  ++V
Sbjct: 139 LRFNGIGDSGASAIARSL-YFNNTLTSLDLSGNFFELAGVQAIAGALQANTTLSV 192



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 73/146 (50%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  +A   + +    FG  G   + ++LG N+T E +S + N    A  +A  
Sbjct: 262 QAIAETLKVNKALCVLFLRENRFGAAGTQSIIQALGTNRTLERLSLSCNHAGDAEAQAIA 321

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            VL+ N  L  L L  + IGD G   + + L  ++ +  L L + ++ D GA AIA+ LK
Sbjct: 322 EVLKVNKTLTHLYLKDSLIGDTGALSIAETLKVSSTLRFLNLFNNEITDTGALAIAKALK 381

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEA 297
            N  L  L L+ N +  +G T+L ++
Sbjct: 382 VNKSLGTLILSKNFLTKAGITALRQS 407


>gi|326929333|ref|XP_003210821.1| PREDICTED: protein NLRC3-like [Meleagris gallopavo]
          Length = 1102

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 150/417 (35%), Positives = 222/417 (53%), Gaps = 11/417 (2%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
            S+ +    F D  +  L   L       + +S A N I   G KA    L  N +L  L+
Sbjct: 684  SLRLDNNQFKDNVMELLGSVLSVKDCQIQRLSLAENQICNKGAKALARSLMVNRSLTALD 743

Query: 225  LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            L  N IG  G K L D L  N  +  L L    +++EGA A+AE L  N  L  L L  N
Sbjct: 744  LRSNSIGPSGAKALADALKKNQVLLSLNLQHNVIKEEGATALAEALLTNHRLITLHLQKN 803

Query: 285  MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
             I   G   LAEAL +N +++ L L+ N      + ALA+ L+ N SL+ L L  NSI +
Sbjct: 804  SIGAHGAKKLAEALAQNCSLKELMLSSN------SXALAEALKVNHSLQSLDLQSNSISN 857

Query: 345  EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
             G+ AL + L S KG L  L++  NSIS +G   +A  ++   +L  ++L  N + DEG 
Sbjct: 858  TGVSALTAALCSNKG-LIDLNLRENSISKEGGPAIAHALRTNCTLKKLDLAANLLHDEGG 916

Query: 405  EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            + IA A+K+N+ +T++ L  N I ++ A A+A+ L+ N  + SLDL  N IG +G  AL+
Sbjct: 917  KAIALAMKENQALTSLHLQWNFIQTQAAVALAQALQSNGSLASLDLQENAIGDEGMAALA 976

Query: 465  EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
              LK +  +  L L    I A+GA+ +A+ L  NN++ +LDLR N +   GAK +A + K
Sbjct: 977  AALKVNTTLADLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNSISVAGAKAMANALK 1036

Query: 525  VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             VN +L  ++L  N +  DGA  IA AL+ N    +T +NL  N + + G   ++DA
Sbjct: 1037 -VNRSLRWLNLQENSLGMDGAICIATALRGNH--GLTYVNLQGNRIGQSGAKMISDA 1090



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 186/363 (51%), Gaps = 7/363 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +++D+   + G  G   LA++L  NQ    ++   N I   G  A    L +N  L 
Sbjct: 737  RSLTALDLRSNSIGPSGAKALADALKKNQVLLSLNLQHNVIKEEGATALAEALLTNHRLI 796

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TL+L  N IG  G K L + L  N  ++ L LSS       + A+AE LK N  L+ L+L
Sbjct: 797  TLHLQKNSIGAHGAKKLAEALAQNCSLKELMLSS------NSXALAEALKVNHSLQSLDL 850

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G ++L  AL  N  +  L+L  N     G  A+A  L  N +L++L L  N 
Sbjct: 851  QSNSISNTGVSALTAALCSNKGLIDLNLRENSISKEGGPAIAHALRTNCTLKKLDLAANL 910

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + DEG +A+   +   +  L  L +  N I  + A  +A+ +++  SL  ++L  N IGD
Sbjct: 911  LHDEGGKAIALAMKENQA-LTSLHLQWNFIQTQAAVALAQALQSNGSLASLDLQENAIGD 969

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EG   +A ALK N T+  + L   +I + GA A+A  L  N+ +  LDL  N I   GAK
Sbjct: 970  EGMAALAAALKVNTTLADLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNSISVAGAK 1029

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            A++  LK + ++  L L    +G  GA  +A  LR N+ ++ ++L+ N +   GAK ++ 
Sbjct: 1030 AMANALKVNRSLRWLNLQENSLGMDGAICIATALRGNHGLTYVNLQGNRIGQSGAKMISD 1089

Query: 522  SFK 524
            + +
Sbjct: 1090 AIR 1092



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 158/333 (47%), Gaps = 37/333 (11%)

Query: 261 EGAKAIAELLKNNSILRVL-ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           E AKA+ E +KN S+  +L  +N + + Y     +++  +E +         N    L  
Sbjct: 621 EIAKAVEEAMKNESLAGMLTPVNCSALAY--LLQVSDVCVEET---------NLSNCLTY 669

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N     L        L L  N   D  +  L S LS +  ++  L +  N I  KGA  +
Sbjct: 670 NICKSLLPQLLFCHSLRLDNNQFKDNVMELLGSVLSVKDCQIQRLSLAENQICNKGAKAL 729

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A  +   +SL  ++L  N IG  GA+ +ADALK+N+ + +++L  N I  +GA+A+A  L
Sbjct: 730 ARSLMVNRSLTALDLRSNSIGPSGAKALADALKKNQVLLSLNLQHNVIKEEGATALAEAL 789

Query: 440 KDNSVITSLDLAYNPIGADGAK----------------------ALSEVLKFHGNINTLK 477
             N  + +L L  N IGA GAK                      AL+E LK + ++ +L 
Sbjct: 790 LTNHRLITLHLQKNSIGAHGAKKLAEALAQNCSLKELMLSSNSXALAEALKVNHSLQSLD 849

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           L    I  +G   +   L  N  +  L+LR N +  EG   +A + +  N  L  +DLA 
Sbjct: 850 LQSNSISNTGVSALTAALCSNKGLIDLNLRENSISKEGGPAIAHALR-TNCTLKKLDLAA 908

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           N + D+G  AIA A+K N+  A+TSL+L  NF+
Sbjct: 909 NLLHDEGGKAIALAMKENQ--ALTSLHLQWNFI 939



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 122/261 (46%), Gaps = 29/261 (11%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            LAE+L  N + + +   +N I+  G+ A    L SN  L  LNL  N I  EG   +   
Sbjct: 835  LAEALKVNHSLQSLDLQSNSISNTGVSALTAALCSNKGLIDLNLRENSISKEGGPAIAHA 894

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L  N  +++L L++  L DEG KAIA  +K N  L  L L  N I      +LA+AL  N
Sbjct: 895  LRTNCTLKKLDLAANLLHDEGGKAIALAMKENQALTSLHLQWNFIQTQAAVALAQALQSN 954

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL------------------------ 337
             ++ SL L  N  G  G  ALA  L+ N +L +LHL                        
Sbjct: 955  GSLASLDLQENAIGDEGMAALAAALKVNTTLADLHLQVASISAAGAQALAEALMVNNSLQ 1014

Query: 338  ----HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
                 GNSI   G +A+ + L   +  L  L++  NS+   GA  +A  ++    L ++N
Sbjct: 1015 VLDLRGNSISVAGAKAMANALKVNRS-LRWLNLQENSLGMDGAICIATALRGNHGLTYVN 1073

Query: 394  LYMNDIGDEGAEKIADALKQN 414
            L  N IG  GA+ I+DA++ N
Sbjct: 1074 LQGNRIGQSGAKMISDAIRTN 1094


>gi|351700213|gb|EHB03132.1| Protein NLRC3 [Heterocephalus glaber]
          Length = 737

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 131/362 (36%), Positives = 198/362 (54%), Gaps = 4/362 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           ++ ++L+ N I ++G K L   L+ N  +  L L S  +  +GAK +A+ LK N  L  L
Sbjct: 368 IQKISLAENQISNKGAKALARSLLVNRSLTTLDLRSNTIGPQGAKGLADALKINRTLTSL 427

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L  N I   G   +AEAL +N +++ L L+ N  G  GA ALA+ L+ N+ L  L L  
Sbjct: 428 SLQKNSIGPLGAQKMAEALKQNKSLKELMLSSNSIGDGGAKALAEALKVNQGLLSLDLQS 487

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           NSI D G+ ALM  L + +  L+ L++  NSIS KGA  +A  + +  +L  ++L  N +
Sbjct: 488 NSISDAGLAALMGALCANQTLLS-LNLRENSISPKGAQALAHALSSNTTLKHLDLTANLL 546

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            D+GA+ IA A+++N  + ++ L  N I    A A+ + L+ NS +TSLDL  N I  +G
Sbjct: 547 YDQGAQAIAVAMRENCALKSLHLQWNFIQVDAARALGQALQLNSSLTSLDLQENAIRDEG 606

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           A AL+  LK +  +  L L    IGA GA  + + L  N T+ ILDLR N +   GAK L
Sbjct: 607 ASALATALKVNTALTALYLQVASIGAPGALALGEALAVNRTLEILDLRGNAIGVSGAKAL 666

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
           A + K VN +L  + L  N +  DG   +A AL  N    +  +NL  N + + G   ++
Sbjct: 667 ANALK-VNSSLRRLSLQENSLGMDGVIGVAMALSGNH--GLQHINLQGNHIGESGARMIS 723

Query: 580 DA 581
           +A
Sbjct: 724 EA 725



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/345 (33%), Positives = 170/345 (49%), Gaps = 1/345 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ +++D+     G +G   LA++L  N+T   +S   N I   G +     L+ N +LK
Sbjct: 394 RSLTTLDLRSNTIGPQGAKGLADALKINRTLTSLSLQKNSIGPLGAQKMAEALKQNKSLK 453

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L LS N IGD G K L + L  N G+  L L S  + D G  A+   L  N  L  L L
Sbjct: 454 ELMLSSNSIGDGGAKALAEALKVNQGLLSLDLQSNSISDAGLAALMGALCANQTLLSLNL 513

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G  +LA AL  N+T++ L L  N     GA A+A  +  N +L+ LHL  N 
Sbjct: 514 RENSISPKGAQALAHALSSNTTLKHLDLTANLLYDQGAQAIAVAMRENCALKSLHLQWNF 573

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I  +  RAL   L      L  LD+  N+I  +GA  +A  +K   +L  + L +  IG 
Sbjct: 574 IQVDAARALGQAL-QLNSSLTSLDLQENAIRDEGASALATALKVNTALTALYLQVASIGA 632

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA  + +AL  NRT+  +DL GN I   GA A+A  LK NS +  L L  N +G DG  
Sbjct: 633 PGALALGEALAVNRTLEILDLRGNAIGVSGAKALANALKVNSSLRRLSLQENSLGMDGVI 692

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            ++  L  +  +  + L    IG SGA  +++ ++ N  +  +++
Sbjct: 693 GVAMALSGNHGLQHINLQGNHIGESGARMISEAIKTNAPMCTVEM 737



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 157/299 (52%), Gaps = 1/299 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K+ ++   + +S  + GD G   LAE+L  NQ    +   +N I+ AG+ A  
Sbjct: 440 QKMAEALKQNKSLKELMLSSNSIGDGGAKALAEALKVNQGLLSLDLQSNSISDAGLAALM 499

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           G L +N  L +LNL  N I  +G + L   L  N  ++ L L++  L D+GA+AIA  ++
Sbjct: 500 GALCANQTLLSLNLRENSISPKGAQALAHALSSNTTLKHLDLTANLLYDQGAQAIAVAMR 559

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L+ L L  N I      +L +AL  NS++ SL L  N     GA+ALA  L+ N +
Sbjct: 560 ENCALKSLHLQWNFIQVDAARALGQALQLNSSLTSLDLQENAIRDEGASALATALKVNTA 619

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L+L   SIG  G  AL   L+  +  L +LD+  N+I   GA  +A  +K   SL  
Sbjct: 620 LTALYLQVASIGAPGALALGEALAVNR-TLEILDLRGNAIGVSGAKALANALKVNSSLRR 678

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           ++L  N +G +G   +A AL  N  +  I+L GN+I   GA  I+  +K N+ + ++++
Sbjct: 679 LSLQENSLGMDGVIGVAMALSGNHGLQHINLQGNHIGESGARMISEAIKTNAPMCTVEM 737



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/252 (36%), Positives = 134/252 (53%), Gaps = 3/252 (1%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           + L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 340 QSLRLDTNQFQDPVMELLGSMLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTTL 399

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NRT+T++ L  N+I   GA  +A  LK N  +  L L+ 
Sbjct: 400 DLRSNTIGPQGAKGLADALKINRTLTSLSLQKNSIGPLGAQKMAEALKQNKSLKELMLSS 459

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GAKAL+E LK +  + +L L    I  +G   +   L  N T+  L+LR N + 
Sbjct: 460 NSIGDGGAKALAEALKVNQGLLSLDLQSNSISDAGLAALMGALCANQTLLSLNLRENSIS 519

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
            +GA+ LA +    N  L  +DL  N + D GA AIA A++  E+ A+ SL+L  NF+  
Sbjct: 520 PKGAQALAHALS-SNTTLKHLDLTANLLYDQGAQAIAVAMR--ENCALKSLHLQWNFIQV 576

Query: 573 FGQSALTDAKDL 584
               AL  A  L
Sbjct: 577 DAARALGQALQL 588


>gi|403273426|ref|XP_003928517.1| PREDICTED: protein NLRC3 [Saimiri boliviensis boliviensis]
          Length = 1037

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/362 (36%), Positives = 202/362 (55%), Gaps = 4/362 (1%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            ++ ++L+ N I ++G K L   L+ N  +  L L S  +  +GAK +A+ LK N  L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKGLADSLKINRTLTSL 727

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L  N I  +G   +A+AL +N +++ L L+ N  G  GA ALA+ L+ N+ L  L L  
Sbjct: 728  SLQKNSIGPTGAQWMADALKQNRSLKELMLSSNSIGDGGAMALAEALKVNQGLESLDLQS 787

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  ++   +L  ++L  N +
Sbjct: 788  NSISDAGVAALMGALCTNQALLS-LSLRENSISPEGAQAIARALRANSTLKNLDLTANLL 846

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             D+GA+ IA A+ +NR +T++ L  N I +  A A+ + L+ N  +TSLDL  N IG DG
Sbjct: 847  HDQGAQAIAVAVTENRALTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENDIGDDG 906

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
            A A++  LK +  +  L L    IGA GA+ + + L  N T+ ILDLR N +   GAK L
Sbjct: 907  ACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAKAL 966

Query: 520  AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
            A + K VN +L  ++L  N +  DGA  +A AL  N    +  +NL  N +   G   ++
Sbjct: 967  ANALK-VNSSLRRLNLQENSLGMDGAIFVATALSGNHR--LQHINLQGNHIGDSGARMIS 1023

Query: 580  DA 581
            +A
Sbjct: 1024 EA 1025



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 137/415 (33%), Positives = 208/415 (50%), Gaps = 3/415 (0%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
            S+  L     +L     + +    F D  +  L   L G +   +++S A N I+  G K
Sbjct: 625  SQGVLQSLLPQLLYCRKLRLDANQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAK 684

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            A    L  N +L +L+L  N IG +G K L D L  N  +  L L    +   GA+ +A+
Sbjct: 685  ALARSLLVNRSLTSLDLRSNSIGPQGAKGLADSLKINRTLTSLSLQKNSIGPTGAQWMAD 744

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             LK N  L+ L L++N I   G  +LAEAL  N  + SL L  N     G  AL   L  
Sbjct: 745  ALKQNRSLKELMLSSNSIGDGGAMALAEALKVNQGLESLDLQSNSISDAGVAALMGALCT 804

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N++L  L L  NSI  EG +A+   L +    L  LD+  N +  +GA  +A  +   ++
Sbjct: 805  NQALLSLSLRENSISPEGAQAIARALRA-NSTLKNLDLTANLLHDQGAQAIAVAVTENRA 863

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N I    A+ +  AL+ NR++T++DL  N+I   GA A+AR LK N+ +T+L
Sbjct: 864  LTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENDIGDDGACAVARALKVNTALTAL 923

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
             L    IGA GA+ L E L  +  +  L L    IG +GA+ +A+ L+ N+++  L+L+ 
Sbjct: 924  YLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQE 983

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
            N L  +GA  +A +    N  L  I+L  N I D GA  I++A+K N       +
Sbjct: 984  NSLGMDGAIFVATALS-GNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1037



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 131/238 (55%), Gaps = 3/238 (1%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R+L L  N   D  +  L S LS +  ++  + +  N IS KGA  +A  +   +SL  +
Sbjct: 640 RKLRLDANQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 699

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +AD+LK NRT+T++ L  N+I   GA  +A  LK N  +  L L+ 
Sbjct: 700 DLRSNSIGPQGAKGLADSLKINRTLTSLSLQKNSIGPTGAQWMADALKQNRSLKELMLSS 759

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA AL+E LK +  + +L L    I  +G   +   L  N  +  L LR N + 
Sbjct: 760 NSIGDGGAMALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQALLSLSLRENSIS 819

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
            EGA+ +A++ +  N  L ++DL  N + D GA AIA A+   E+ A+TSL+L  NF+
Sbjct: 820 PEGAQAIARALR-ANSTLKNLDLTANLLHDQGAQAIAVAV--TENRALTSLHLQWNFI 874


>gi|326434434|gb|EGD80004.1| hypothetical protein PTSG_10280 [Salpingoeca sp. ATCC 50818]
          Length = 1272

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/321 (38%), Positives = 182/321 (56%), Gaps = 2/321 (0%)

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           +GVK     + +N   + + L    L D  A+A+AE LK+N+ L+ L+L  N I   G  
Sbjct: 23  DGVKEEIRAIANNTCGDNVGLVGAGLGDIEARAVAEALKDNTCLKALDLWGNSIGPEGAV 82

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LAE L  N+T+  L L GN  G  GA ALA+ L+ N +L  L L GN IG EG  AL  
Sbjct: 83  ALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAAALAE 142

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  L +G N I  +GA  +AE +K+  ++  + LY N IG EGA  +A+ LK
Sbjct: 143 MLKHNTA-LKQLYLGGNRIGPEGAVALAEMLKHNTTMTLLALYNNRIGPEGAVALAEMLK 201

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+  +DL GN+I  +GA A+A +LK N+ +T L L+ N IG +GA AL+E+LK +  
Sbjct: 202 HNTTLERLDLFGNDIGPEGAVALAEMLKHNTTMTGLGLSNNSIGDEGAVALAEMLKHNTA 261

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           +  L L   +IG  GA  +A+ML++N T+  L L AN +   GA  LA+  K  N  +TS
Sbjct: 262 LKRLYLYNNRIGPEGAVALAEMLKHNTTLERLGLGANSIGPRGAAALAEMLK-HNTTMTS 320

Query: 533 IDLAFNEIRDDGAFAIAQALK 553
           + ++ N I + G   + + L+
Sbjct: 321 LFISHNGITERGMVNVLKQLQ 341



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/330 (37%), Positives = 186/330 (56%), Gaps = 2/330 (0%)

Query: 187 GYNQTAEEV-SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           G  +  EEV +  A      G+K     + +N     + L G  +GD   + + + L DN
Sbjct: 4   GEKRAREEVEALLAQTKLKDGVKEEIRAIANNTCGDNVGLVGAGLGDIEARAVAEALKDN 63

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             ++ L L    +  EGA A+AE+LK+N+ L  L+L  N I   G  +LAE L  N+T+ 
Sbjct: 64  TCLKALDLWGNSIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTLE 123

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L GN  G  GA ALA+ L+ N +L++L+L GN IG EG  AL   L      + +L 
Sbjct: 124 RLDLFGNDIGPEGAAALAEMLKHNTALKQLYLGGNRIGPEGAVALAEMLKHNT-TMTLLA 182

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + NN I  +GA  +AE +K+  +L  ++L+ NDIG EGA  +A+ LK N T+T + L  N
Sbjct: 183 LYNNRIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTMTGLGLSNN 242

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           +I  +GA A+A +LK N+ +  L L  N IG +GA AL+E+LK +  +  L LG   IG 
Sbjct: 243 SIGDEGAVALAEMLKHNTALKRLYLYNNRIGPEGAVALAEMLKHNTTLERLGLGANSIGP 302

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEG 515
            GA  +A+ML++N T++ L +  NG+ + G
Sbjct: 303 RGAAALAEMLKHNTTMTSLFISHNGITERG 332



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 169/307 (55%), Gaps = 7/307 (2%)

Query: 159 KELRAFSS------VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           +E+RA ++      V + G   GD     +AE+L  N   + +    N I   G  A   
Sbjct: 27  EEIRAIANNTCGDNVGLVGAGLGDIEARAVAEALKDNTCLKALDLWGNSIGPEGAVALAE 86

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L+ N  L+ L+L GN IG EG   L ++L  N  +ERL L   D+  EGA A+AE+LK+
Sbjct: 87  MLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAAALAEMLKH 146

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L+ L L  N I   G  +LAE L  N+T+  L L  N  G  GA ALA+ L+ N +L
Sbjct: 147 NTALKQLYLGGNRIGPEGAVALAEMLKHNTTMTLLALYNNRIGPEGAVALAEMLKHNTTL 206

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L L GN IG EG  AL   L      +  L + NNSI  +GA  +AE +K+  +L  +
Sbjct: 207 ERLDLFGNDIGPEGAVALAEMLKHNT-TMTGLGLSNNSIGDEGAVALAEMLKHNTALKRL 265

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            LY N IG EGA  +A+ LK N T+  + LG N+I  +GA+A+A +LK N+ +TSL +++
Sbjct: 266 YLYNNRIGPEGAVALAEMLKHNTTLERLGLGANSIGPRGAAALAEMLKHNTTMTSLFISH 325

Query: 453 NPIGADG 459
           N I   G
Sbjct: 326 NGITERG 332



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 142/244 (58%), Gaps = 4/244 (1%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L G  +GD   RA+   L      L  LD+  NSI  +GA  +AE +K+  +L  ++L+ 
Sbjct: 43  LVGAGLGDIEARAVAEALKDNTC-LKALDLWGNSIGPEGAVALAEMLKHNTTLERLDLFG 101

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           NDIG EGA  +A+ LK N T+  +DL GN+I  +GA+A+A +LK N+ +  L L  N IG
Sbjct: 102 NDIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAAALAEMLKHNTALKQLYLGGNRIG 161

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            +GA AL+E+LK +  +  L L   +IG  GA  +A+ML++N T+  LDL  N +  EGA
Sbjct: 162 PEGAVALAEMLKHNTTMTLLALYNNRIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGA 221

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 576
             LA+  K  N  +T + L+ N I D+GA A+A+ LK N   A+  L L NN +   G  
Sbjct: 222 VALAEMLK-HNTTMTGLGLSNNSIGDEGAVALAEMLKHN--TALKRLYLYNNRIGPEGAV 278

Query: 577 ALTD 580
           AL +
Sbjct: 279 ALAE 282



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 147/291 (50%), Gaps = 3/291 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E    L E  K       +D+ G + G EG   LAE L +N T E +    N I   G  
Sbjct: 79  EGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAA 138

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   +L+ N ALK L L GN IG EG   L ++L  N  +  L L +  +  EGA A+AE
Sbjct: 139 ALAEMLKHNTALKQLYLGGNRIGPEGAVALAEMLKHNTTMTLLALYNNRIGPEGAVALAE 198

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +LK+N+ L  L+L  N I   G  +LAE L  N+T+  L L+ N  G  GA ALA+ L+ 
Sbjct: 199 MLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTMTGLGLSNNSIGDEGAVALAEMLKH 258

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L+ L+L+ N IG EG  AL   L      L  L +G NSI  +GA  +AE +K+  +
Sbjct: 259 NTALKRLYLYNNRIGPEGAVALAEMLKHNT-TLERLGLGANSIGPRGAAALAEMLKHNTT 317

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +  + +  N I + G   +   L+       I L  + +  K ++A+AR L
Sbjct: 318 MTSLFISHNGITERGMVNVLKQLQHIDAKAKILLFEDKL--KSSTAVARAL 366



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 81/162 (50%)

Query: 137 NLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS 196
            LL+ +  ++  E    L E  K       +D+ G + G EG   LAE L +N T   + 
Sbjct: 179 TLLALYNNRIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTMTGLG 238

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
            + N I   G  A   +L+ N ALK L L  N IG EG   L ++L  N  +ERL L + 
Sbjct: 239 LSNNSIGDEGAVALAEMLKHNTALKRLYLYNNRIGPEGAVALAEMLKHNTTLERLGLGAN 298

Query: 257 DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +   GA A+AE+LK+N+ +  L +++N I   G  ++ + L
Sbjct: 299 SIGPRGAAALAEMLKHNTTMTSLFISHNGITERGMVNVLKQL 340


>gi|320165307|gb|EFW42206.1| protein kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 926

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/300 (40%), Positives = 179/300 (59%), Gaps = 4/300 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L++++I  +   S+ EAL  N T+  ++LN N  G  GA+A+A+GL  N+ L  L+++
Sbjct: 27  LSLSDSLIRATEAQSVGEALKVNRTLTKINLNENLFGPAGASAIAEGLSMNQGLTNLYVN 86

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G +A    L   +    +L + NN I   GA  ++E +K  ++L  I L  N+
Sbjct: 87  YNEIGDAGSQAFADALKVNRTVKELL-LQNNLIGEAGAQAISESLKVNRTLTTIGLGWNE 145

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD GA+ I+++LK NR++T I L G +I + GA AIA  L  N  +TS+    N IG  
Sbjct: 146 IGDAGAKAISESLKVNRSLTCIGLTGTHIGTVGAQAIAEGLAVNRTLTSIGFGENQIGDA 205

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GAKA++E LK +  +  + L   QIG  GA  +A+ L+ N T++ + L  N + D GA+ 
Sbjct: 206 GAKAIAEALKVNTTLTCISLIQSQIGDDGACAIAEALKVNTTLTEIVLYTNQIGDVGAQA 265

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           +A++ KV N+ +T I L  N+I D GA AIA+ALK N    VT+L L +NFLTK G  AL
Sbjct: 266 IAEALKV-NKTVTKIHLQQNQIGDAGAKAIAKALKVN--TTVTTLRLWDNFLTKAGIKAL 322



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 158/286 (55%), Gaps = 2/286 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +S + + I A   ++    L+ N  L  +NL+ N  G  G   + + L  N G+  L ++
Sbjct: 27  LSLSDSLIRATEAQSVGEALKVNRTLTKINLNENLFGPAGASAIAEGLSMNQGLTNLYVN 86

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
             ++ D G++A A+ LK N  ++ L L NN+I  +G  +++E+L  N T+ ++ L  N  
Sbjct: 87  YNEIGDAGSQAFADALKVNRTVKELLLQNNLIGEAGAQAISESLKVNRTLTTIGLGWNEI 146

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A+++ L+ N+SL  + L G  IG  G +A+  GL+  +  L  +  G N I   
Sbjct: 147 GDAGAKAISESLKVNRSLTCIGLTGTHIGTVGAQAIAEGLAVNR-TLTSIGFGENQIGDA 205

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K   +L  I+L  + IGD+GA  IA+ALK N T+T I L  N I   GA A
Sbjct: 206 GAKAIAEALKVNTTLTCISLIQSQIGDDGACAIAEALKVNTTLTEIVLYTNQIGDVGAQA 265

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           IA  LK N  +T + L  N IG  GAKA+++ LK +  + TL+L W
Sbjct: 266 IAEALKVNKTVTKIHLQQNQIGDAGAKAIAKALKVNTTVTTLRL-W 310



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/272 (37%), Positives = 146/272 (53%), Gaps = 1/272 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA AIAE L  N  L  L +N N I  +G  + A+AL  N T++ L L  N  G  GA A
Sbjct: 66  GASAIAEGLSMNQGLTNLYVNYNEIGDAGSQAFADALKVNRTVKELLLQNNLIGEAGAQA 125

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +++ L+ N++L  + L  N IGD G +A+   L   +  L  + +    I   GA  +AE
Sbjct: 126 ISESLKVNRTLTTIGLGWNEIGDAGAKAISESLKVNRS-LTCIGLTGTHIGTVGAQAIAE 184

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +   ++L  I    N IGD GA+ IA+ALK N T+T I L  + I   GA AIA  LK 
Sbjct: 185 GLAVNRTLTSIGFGENQIGDAGAKAIAEALKVNTTLTCISLIQSQIGDDGACAIAEALKV 244

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ +T + L  N IG  GA+A++E LK +  +  + L   QIG +GA+ +A  L+ N T+
Sbjct: 245 NTTLTEIVLYTNQIGDVGAQAIAEALKVNKTVTKIHLQQNQIGDAGAKAIAKALKVNTTV 304

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
           + L L  N L   G K L Q+  ++   + SI
Sbjct: 305 TTLRLWDNFLTKAGIKALKQTGNILCSFVDSI 336



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 155/322 (48%), Gaps = 33/322 (10%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q++ E  K  R  + ++++   FG  G   +AE L  NQ    +    N I  AG +AF 
Sbjct: 40  QSVGEALKVNRTLTKINLNENLFGPAGASAIAEGLSMNQGLTNLYVNYNEIGDAGSQAFA 99

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  +K L L  N IG+ G + + + L  N  +  + L   ++ D GAKAI+E LK
Sbjct: 100 DALKVNRTVKELLLQNNLIGEAGAQAISESLKVNRTLTTIGLGWNEIGDAGAKAISESLK 159

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  + L    I   G  ++AE L  N T+ S+    N  G  GA A+A+ L+ N +
Sbjct: 160 VNRSLTCIGLTGTHIGTVGAQAIAEGLAVNRTLTSIGFGENQIGDAGAKAIAEALKVNTT 219

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  + L  + IGD+                             GA  +AE +K   +L  
Sbjct: 220 LTCISLIQSQIGDD-----------------------------GACAIAEALKVNTTLTE 250

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           I LY N IGD GA+ IA+ALK N+T+T I L  N I   GA AIA+ LK N+ +T+L L 
Sbjct: 251 IVLYTNQIGDVGAQAIAEALKVNKTVTKIHLQQNQIGDAGAKAIAKALKVNTTVTTLRLW 310

Query: 452 YNPIGADGAKALSEVLKFHGNI 473
            N +   G KAL +     GNI
Sbjct: 311 DNFLTKAGIKALKQT----GNI 328



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 155/304 (50%), Gaps = 51/304 (16%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           EL +++ + +G+ SL+++L+                A  A ++ + L+ N++L +++L+ 
Sbjct: 15  ELYDHVKNATGYLSLSDSLIR---------------ATEAQSVGEALKVNRTLTKINLNE 59

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN-- 397
           N  G  G  A+  GLS  +G                                 NLY+N  
Sbjct: 60  NLFGPAGASAIAEGLSMNQG-------------------------------LTNLYVNYN 88

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           +IGD G++  ADALK NRT+  + L  N I   GA AI+  LK N  +T++ L +N IG 
Sbjct: 89  EIGDAGSQAFADALKVNRTVKELLLQNNLIGEAGAQAISESLKVNRTLTTIGLGWNEIGD 148

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
            GAKA+SE LK + ++  + L    IG  GA+ +A+ L  N T++ +    N + D GAK
Sbjct: 149 AGAKAISESLKVNRSLTCIGLTGTHIGTVGAQAIAEGLAVNRTLTSIGFGENQIGDAGAK 208

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 577
            +A++ KV N  LT I L  ++I DDGA AIA+ALK N    +T + L  N +   G  A
Sbjct: 209 AIAEALKV-NTTLTCISLIQSQIGDDGACAIAEALKVN--TTLTEIVLYTNQIGDVGAQA 265

Query: 578 LTDA 581
           + +A
Sbjct: 266 IAEA 269



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 14/249 (5%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G+ G   ++ESL  N+T   +    N I  AG KA    L+ N +L  + L+G  IG  
Sbjct: 118 IGEAGAQAISESLKVNRTLTTIGLGWNEIGDAGAKAISESLKVNRSLTCIGLTGTHIGTV 177

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  +  +      + D GAKAIAE LK N+ L  + L  + I   G  +
Sbjct: 178 GAQAIAEGLAVNRTLTSIGFGENQIGDAGAKAIAEALKVNTTLTCISLIQSQIGDDGACA 237

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AEAL  N+T+  + L  N  G +GA A+A+ L+ NK++ ++HL  N IGD G +A+   
Sbjct: 238 IAEALKVNTTLTEIVLYTNQIGDVGAQAIAEALKVNKTVTKIHLQQNQIGDAGAKAIAKA 297

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L      +  L + +N ++  G     + +K   ++L    +++ IG       AD L Q
Sbjct: 298 LKVNT-TVTTLRLWDNFLTKAG----IKALKQTGNILCS--FVDSIG-------ADGLDQ 343

Query: 414 NRTITTIDL 422
            R  +  DL
Sbjct: 344 QRVPSPADL 352


>gi|320169066|gb|EFW45965.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 529

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 158/420 (37%), Positives = 229/420 (54%), Gaps = 6/420 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +A  S +MS    GD     +A +L  N T  E++   N I AAG +A    L++N ALK
Sbjct: 25  KASGSHNMSSAQIGDADAQAIAAALKVNTTLTEINLGGNQIGAAGAQAIAEALKANRALK 84

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IGD G + + + L  N  +  + LS   +   GA+AIAE LK  S  RV  L
Sbjct: 85  KLALGRNQIGDAGAEAIAEALKVNTTLTNIYLSKNHIGQVGAQAIAEALKKGSP-RV-SL 142

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N I  +G  ++A AL  N+T+  + L  N     GA A+A+ L+ N +L  L L GN 
Sbjct: 143 SENQIGDAGALAIAAALKVNTTVTEVGLGMNQIDVAGAQAIAEALKVNATLTNLFLGGNP 202

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            GD G +A+   LS+   KL  L++  + I   GA  +A  ++   +++ + L  N IGD
Sbjct: 203 FGDAGAQAVAEALSANT-KLICLNLPQSQIGEAGAHAIASALEVNTTVMLLGLNENQIGD 261

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA+ IA ALK N T+T + LG N I   GA AIA  LK N ++ S+ L  N IG  GA+
Sbjct: 262 LGAQAIAAALKVNTTVTEVGLGMNQIDVAGAQAIAEALKVNQIVISIGLDENQIGDAGAE 321

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           A++E +  +  +  L LG  QIG +GA+ +A   + N T++ L L  N + D GA+ +A+
Sbjct: 322 AIAEAITVNKTVKKLGLGKNQIGDAGAQAIAVAFQVNQTVTALGLHQNRIGDVGAQAIAE 381

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           + K VN+ +T + L  N++ D GA AIAQALK N  VA   L L  N +   G  A+ +A
Sbjct: 382 ALK-VNKTVTELGLYENQLGDAGAEAIAQALKVNTTVA--ELGLDGNQIGDVGAQAIVEA 438



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 150/423 (35%), Positives = 222/423 (52%), Gaps = 5/423 (1%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  K  RA   + +     GD G   +AE+L  N T   +  + N I   G +A    L+
Sbjct: 75  EALKANRALKKLALGRNQIGDAGAEAIAEALKVNTTLTNIYLSKNHIGQVGAQAIAEALK 134

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
                  ++LS N IGD G   +   L  N  V  + L    +   GA+AIAE LK N+ 
Sbjct: 135 K--GSPRVSLSENQIGDAGALAIAAALKVNTTVTEVGLGMNQIDVAGAQAIAEALKVNAT 192

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L L  N    +G  ++AEAL  N+ +  L+L  +  G  GA+A+A  LE N ++  L
Sbjct: 193 LTNLFLGGNPFGDAGAQAVAEALSANTKLICLNLPQSQIGEAGAHAIASALEVNTTVMLL 252

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L+ N IGD G +A+ + L      +  + +G N I   GA  +AE +K  + ++ I L 
Sbjct: 253 GLNENQIGDLGAQAIAAALKVNT-TVTEVGLGMNQIDVAGAQAIAEALKVNQIVISIGLD 311

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IGD GAE IA+A+  N+T+  + LG N I   GA AIA   + N  +T+L L  N I
Sbjct: 312 ENQIGDAGAEAIAEAITVNKTVKKLGLGKNQIGDAGAQAIAVAFQVNQTVTALGLHQNRI 371

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G  GA+A++E LK +  +  L L   Q+G +GAE +A  L+ N T++ L L  N + D G
Sbjct: 372 GDVGAQAIAEALKVNKTVTELGLYENQLGDAGAEAIAQALKVNTTVAELGLDGNQIGDVG 431

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN-NFLTKFG 574
           A+ + ++ + VN+ +  + L  N+I D  A  IA ALK N+  A T  +L+N NFLT+ G
Sbjct: 432 AQAIVEALR-VNKTVKMLYLEGNQIGDAKALEIAMALKTNKTPADTHNSLSNPNFLTRAG 490

Query: 575 QSA 577
            +A
Sbjct: 491 TAA 493


>gi|320163869|gb|EFW40768.1| NOD3 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 538

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/321 (39%), Positives = 183/321 (57%), Gaps = 4/321 (1%)

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           LK N+ L  L+L  N I      ++AEAL  N+T+  L L  N  G  GA +LA+ L+GN
Sbjct: 41  LKVNTTLTWLKLEKNQIGDPEAQAIAEALKVNTTLTCLDLGNNRIGDAGAQSLAEALKGN 100

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K+L EL L  N IGD G +++   L   K  L  LD+  + I   G   +AE +K   +L
Sbjct: 101 KTLDELDLGNNQIGDAGAQSIAEALKVNK-TLDELDLAGSLIGDAGVQAIAEALKVNTTL 159

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             +NL  N IGD GA+ +A+ALK N T+T +DL  N I   GA AIA  L+ N  +T L 
Sbjct: 160 TGLNLDGNQIGDAGAKVLAEALKVNSTLTKLDLDANQIGDAGAQAIAEALRVNPTVTKLR 219

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L+ N IG  GA+A+ E LK +  +  L L   +IG +GA+ +A+ L+ N T++ L L  N
Sbjct: 220 LSENQIGDAGAQAIGEALKVNTGVTWLNLWENRIGDAGAQAIAEALKVNTTLNRLGLSEN 279

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
            + + GA+ +A++ K VN  LT + L+ N+I + GA AIA+ALK N  +AV  L L  N 
Sbjct: 280 QIGNVGARAIAEALK-VNTTLTELGLSENQIGNVGAEAIAEALKVNTTLAV--LGLHTNE 336

Query: 570 LTKFGQSALTDAKDLVYEMSE 590
           +   G   L DA ++   M++
Sbjct: 337 IGDDGACELADALEVNTTMTK 357



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/363 (36%), Positives = 190/363 (52%), Gaps = 6/363 (1%)

Query: 154 LNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           +NE  +EL      A   +D+S           +AE+L  N T   +    N I     +
Sbjct: 4   MNELQRELYDIVKNATEDLDLSEERIDVAAAQAIAEALKVNTTLTWLKLEKNQIGDPEAQ 63

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L+ N  L  L+L  N IGD G + L + L  N  ++ L L +  + D GA++IAE
Sbjct: 64  AIAEALKVNTTLTCLDLGNNRIGDAGAQSLAEALKGNKTLDELDLGNNQIGDAGAQSIAE 123

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N  L  L+L  ++I  +G  ++AEAL  N+T+  L+L+GN  G  GA  LA+ L+ 
Sbjct: 124 ALKVNKTLDELDLAGSLIGDAGVQAIAEALKVNTTLTGLNLDGNQIGDAGAKVLAEALKV 183

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L +L L  N IGD G +A+   L      +  L +  N I   GA  + E +K    
Sbjct: 184 NSTLTKLDLDANQIGDAGAQAIAEALRVNP-TVTKLRLSENQIGDAGAQAIGEALKVNTG 242

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           + W+NL+ N IGD GA+ IA+ALK N T+  + L  N I + GA AIA  LK N+ +T L
Sbjct: 243 VTWLNLWENRIGDAGAQAIAEALKVNTTLNRLGLSENQIGNVGARAIAEALKVNTTLTEL 302

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L+ N IG  GA+A++E LK +  +  L L   +IG  GA  +AD L  N T++ L L  
Sbjct: 303 GLSENQIGNVGAEAIAEALKVNTTLAVLGLHTNEIGDDGACELADALEVNTTMTKLHLDR 362

Query: 509 NGL 511
           N +
Sbjct: 363 NCM 365



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 157/291 (53%), Gaps = 2/291 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q+L E  K  +    +D+     GD G   +AE+L  N+T +E+  A + I  AG++A  
Sbjct: 91  QSLAEALKGNKTLDELDLGNNQIGDAGAQSIAEALKVNKTLDELDLAGSLIGDAGVQAIA 150

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNL GN IGD G K L + L  N+ + +L L +  + D GA+AIAE L+
Sbjct: 151 EALKVNTTLTGLNLDGNQIGDAGAKVLAEALKVNSTLTKLDLDANQIGDAGAQAIAEALR 210

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  +  L L+ N I  +G  ++ EAL  N+ +  L+L  N  G  GA A+A+ L+ N +
Sbjct: 211 VNPTVTKLRLSENQIGDAGAQAIGEALKVNTGVTWLNLWENRIGDAGAQAIAEALKVNTT 270

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L L  N IG+ G RA+   L      L  L +  N I   GA  +AE +K   +L  
Sbjct: 271 LNRLGLSENQIGNVGARAIAEALKVNT-TLTELGLSENQIGNVGAEAIAEALKVNTTLAV 329

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           + L+ N+IGD+GA ++ADAL+ N T+T + L   N  + G SA+    +DN
Sbjct: 330 LGLHTNEIGDDGACELADALEVNTTMTKLHL-DRNCMTYGCSALLDAREDN 379


>gi|320170451|gb|EFW47350.1| serine/threonine-protein kinase PBS1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1403

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/333 (36%), Positives = 180/333 (54%), Gaps = 5/333 (1%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +A +L  N+ A  +  + N    AG++A    L+ N+++ TL L  NPIGD G   + + 
Sbjct: 9   IAAALKVNKVATVILLSENLFGNAGVQAVADSLKVNMSVTTLCLRSNPIGDTGALAIAET 68

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  +  ++L    + D GA+AIA+ L  N+ L  LEL+ N I  +G  ++A A   N
Sbjct: 69  LQLNTTLTFIRLGDCQIGDAGAQAIAKTLHVNTTLACLELSANQIGDAGMEAIALAFNVN 128

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG---NSIGDEGIRALMSGLSSRK 358
            T+ SL L GN  G   A  +A+ L  N +L EL L G   N +GD G +A+  GL + K
Sbjct: 129 KTVTSLRLGGNPIGDAAAQTIAETLAVNTTLTELGLGGANSNHLGDAGAQAIAEGLKANK 188

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
              A LD+  N I   GA  +AE +K   +L  + L +N IGD G + IAD LK N  +T
Sbjct: 189 AVTA-LDLSMNEIGTVGAQAIAEALKVNTTLTKLELSVNGIGDSGVKAIADGLKVNPRLT 247

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            + L    I + GA AI+  LK N  +T L L YN IG DG +A+++ LK H  +  L L
Sbjct: 248 ELHLAHCQIGAAGAKAISEALKVNKTVTQLYLGYNQIGDDGVQAIADTLKEH-TMTELIL 306

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
              +IG +GA+ +A+ LR N  ++ L L  N +
Sbjct: 307 SGNRIGDAGAQAIAEALRVNKRLTKLFLHENQI 339



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 126/339 (37%), Positives = 187/339 (55%), Gaps = 6/339 (1%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           A ++A    L+ N     + LS N  G+ GV+ + D L  N  V  L L S  + D GA 
Sbjct: 4   AEVQAIAAALKVNKVATVILLSENLFGNAGVQAVADSLKVNMSVTTLCLRSNPIGDTGAL 63

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE L+ N+ L  + L +  I  +G  ++A+ L  N+T+  L L+ N  G  G  A+A 
Sbjct: 64  AIAETLQLNTTLTFIRLGDCQIGDAGAQAIAKTLHVNTTLACLELSANQIGDAGMEAIAL 123

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG---NNSISAKGAFHVAE 381
               NK++  L L GN IGD   + +   L+     L  L +G   +N +   GA  +AE
Sbjct: 124 AFNVNKTVTSLRLGGNPIGDAAAQTIAETLAVNT-TLTELGLGGANSNHLGDAGAQAIAE 182

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K  K++  ++L MN+IG  GA+ IA+ALK N T+T ++L  N I   G  AIA  LK 
Sbjct: 183 GLKANKAVTALDLSMNEIGTVGAQAIAEALKVNTTLTKLELSVNGIGDSGVKAIADGLKV 242

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  +T L LA+  IGA GAKA+SE LK +  +  L LG+ QIG  G + +AD L+  +T+
Sbjct: 243 NPRLTELHLAHCQIGAAGAKAISEALKVNKTVTQLYLGYNQIGDDGVQAIADTLK-EHTM 301

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
           + L L  N + D GA+ +A++ + VN+ LT + L  N+I
Sbjct: 302 TELILSGNRIGDAGAQAIAEALR-VNKRLTKLFLHENQI 339



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/295 (35%), Positives = 152/295 (51%), Gaps = 5/295 (1%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE+L  N T   +      I  AG +A    L  N  L  L LS N IGD 
Sbjct: 57  IGDTGALAIAETLQLNTTLTFIRLGDCQIGDAGAQAIAKTLHVNTTLACLELSANQIGDA 116

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL---NNNMIDYSG 290
           G++ +      N  V  L+L    + D  A+ IAE L  N+ L  L L   N+N +  +G
Sbjct: 117 GMEAIALAFNVNKTVTSLRLGGNPIGDAAAQTIAETLAVNTTLTELGLGGANSNHLGDAG 176

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             ++AE L  N  + +L L+ N  G +GA A+A+ L+ N +L +L L  N IGD G++A+
Sbjct: 177 AQAIAEGLKANKAVTALDLSMNEIGTVGAQAIAEALKVNTTLTKLELSVNGIGDSGVKAI 236

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
             GL     +L  L + +  I A GA  ++E +K  K++  + L  N IGD+G + IAD 
Sbjct: 237 ADGLKVNP-RLTELHLAHCQIGAAGAKAISEALKVNKTVTQLYLGYNQIGDDGVQAIADT 295

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
           LK++ T+T + L GN I   GA AIA  L+ N  +T L L  N IG     AL +
Sbjct: 296 LKEH-TMTELILSGNRIGDAGAQAIAEALRVNKRLTKLFLHENQIGYYEETALRQ 349



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 88/171 (51%), Gaps = 1/171 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GD G   +AE L  N+    +  + N I   G +A    L+ N  L  L LS N IGD
Sbjct: 171 HLGDAGAQAIAEGLKANKAVTALDLSMNEIGTVGAQAIAEALKVNTTLTKLELSVNGIGD 230

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            GVK + D L  N  +  L L+   +   GAKAI+E LK N  +  L L  N I   G  
Sbjct: 231 SGVKAIADGLKVNPRLTELHLAHCQIGAAGAKAISEALKVNKTVTQLYLGYNQIGDDGVQ 290

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           ++A+ L E+ T+  L L+GN  G  GA A+A+ L  NK L +L LH N IG
Sbjct: 291 AIADTLKEH-TMTELILSGNRIGDAGAQAIAEALRVNKRLTKLFLHENQIG 340



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 77/153 (50%), Gaps = 1/153 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + +++S    GD G+  +A+ L  N    E+  A   I AAG KA  
Sbjct: 206 QAIAEALKVNTTLTKLELSVNGIGDSGVKAIADGLKVNPRLTELHLAHCQIGAAGAKAIS 265

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  +  L L  N IGD+GV+ + D L ++   E L LS   + D GA+AIAE L+
Sbjct: 266 EALKVNKTVTQLYLGYNQIGDDGVQAIADTLKEHTMTE-LILSGNRIGDAGAQAIAEALR 324

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
            N  L  L L+ N I Y   T+L ++   + TI
Sbjct: 325 VNKRLTKLFLHENQIGYYEETALRQSAHASCTI 357


>gi|326427735|gb|EGD73305.1| hypothetical protein PTSG_12243 [Salpingoeca sp. ATCC 50818]
          Length = 938

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 141/412 (34%), Positives = 205/412 (49%), Gaps = 34/412 (8%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           G  G   +AE+L  N     +    N I   G+ A   +L+ N  + +L+L  N IG EG
Sbjct: 66  GVSGARAVAEALKDNTCLNTLWLGGNNIGDEGVAALAEMLKHNTTMTSLSLWRNDIGPEG 125

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
              L ++L  N  +E L L++  +  EG  A AE+LK+N+ L+ L+L +N I   G T+L
Sbjct: 126 AVALAEMLKHNTNIEELNLAANSIGGEGVVAFAEMLKHNTALKTLDLGDNSITPVGGTAL 185

Query: 295 AEALLENSTIRSLHLNGN----------------------YGGALGANALAKGLEGNKSL 332
             AL +N T+  L + GN                      Y    G  A  +  + NK +
Sbjct: 186 GAALDQNRTLEGLDIKGNSAATARAFGAALPVDREIGTIWYDDKEGKAAFNEARKKNK-I 244

Query: 333 R---------ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           R         E+ L GN +GD   R +   L      L  L + +NSIS KGA  +A+ +
Sbjct: 245 RAIANNTCGDEVRLVGNDLGDSETREVAEALKDNTC-LKELILVHNSISDKGAVALAKVL 303

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           K+ KSL  +NL  N I  EGA  +A+ LK N TIT + L  N+I  KGA A+A+VLK N+
Sbjct: 304 KHNKSLTELNLQGNSISVEGAVALAEMLKHNTTITGLSLESNSISDKGAVALAKVLKHNT 363

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            +  L L  NPI  +GA AL+E+LK +  +  L L    IG  GA  + +ML++N +++ 
Sbjct: 364 TLERLSLQGNPISTEGAVALAEMLKHNTTLEGLGLNDNTIGDKGAVAMTEMLKHNKSLTA 423

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           L L +N + D+ A  LA+  K  N  L  + L  N I   G  A+  AL  N
Sbjct: 424 LVLESNSIGDQVAVALAEVLK-QNMTLQYLFLGDNSITPVGGTALGAALDQN 474



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 136/386 (35%), Positives = 184/386 (47%), Gaps = 31/386 (8%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K     +S+ +   + G EG   LAE L +N   EE++ AAN I   G+ AF  +
Sbjct: 101 LAEMLKHNTTMTSLSLWRNDIGPEGAVALAEMLKHNTNIEELNLAANSIGGEGVVAFAEM 160

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS--------------SVDLR 259
           L+ N ALKTL+L  N I   G   L   L  N  +E L +                VD  
Sbjct: 161 LKHNTALKTLDLGDNSITPVGGTALGAALDQNRTLEGLDIKGNSAATARAFGAALPVDRE 220

Query: 260 --------DEGAKAIAELLKNNSILRV--------LELNNNMIDYSGFTSLAEALLENST 303
                    EG  A  E  K N I  +        + L  N +  S    +AEAL +N+ 
Sbjct: 221 IGTIWYDDKEGKAAFNEARKKNKIRAIANNTCGDEVRLVGNDLGDSETREVAEALKDNTC 280

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           ++ L L  N     GA ALAK L+ NKSL EL+L GNSI  EG  AL   L      +  
Sbjct: 281 LKELILVHNSISDKGAVALAKVLKHNKSLTELNLQGNSISVEGAVALAEMLK-HNTTITG 339

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L + +NSIS KGA  +A+ +K+  +L  ++L  N I  EGA  +A+ LK N T+  + L 
Sbjct: 340 LSLESNSISDKGAVALAKVLKHNTTLERLSLQGNPISTEGAVALAEMLKHNTTLEGLGLN 399

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I  KGA A+  +LK N  +T+L L  N IG   A AL+EVLK +  +  L LG   I
Sbjct: 400 DNTIGDKGAVAMTEMLKHNKSLTALVLESNSIGDQVAVALAEVLKQNMTLQYLFLGDNSI 459

Query: 484 GASGAEFVADMLRYNNTISILDLRAN 509
              G   +   L  N T+  LD++ N
Sbjct: 460 TPVGGTALGAALDQNRTLEGLDIKGN 485



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 137/287 (47%), Gaps = 37/287 (12%)

Query: 148 RESKQTLNEFAKE--LRAFSS------VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
           +E K   NE  K+  +RA ++      V + G + GD     +AE+L  N   +E+    
Sbjct: 229 KEGKAAFNEARKKNKIRAIANNTCGDEVRLVGNDLGDSETREVAEALKDNTCLKELILVH 288

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N I+  G  A   VL+ N +L  LNL GN I  EG   L ++L  N  +  L L S  + 
Sbjct: 289 NSISDKGAVALAKVLKHNKSLTELNLQGNSISVEGAVALAEMLKHNTTITGLSLESNSIS 348

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D+GA A+A++LK+N+ L  L L  N I   G  +LAE L  N+T+  L LN N  G  GA
Sbjct: 349 DKGAVALAKVLKHNTTLERLSLQGNPISTEGAVALAEMLKHNTTLEGLGLNDNTIGDKGA 408

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+ + L+ NKSL  L L  NSIGD+   AL                             
Sbjct: 409 VAMTEMLKHNKSLTALVLESNSIGDQVAVAL----------------------------- 439

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
           AE +K   +L ++ L  N I   G   +  AL QNRT+  +D+ GN+
Sbjct: 440 AEVLKQNMTLQYLFLGDNSITPVGGTALGAALDQNRTLEGLDIKGNS 486



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 129/275 (46%), Gaps = 20/275 (7%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A+A+ L+ N  L  L L GN+IGDEG+ AL   L      +  L +  N I  +
Sbjct: 66  GVSGARAVAEALKDNTCLNTLWLGGNNIGDEGVAALAEMLK-HNTTMTSLSLWRNDIGPE 124

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K+  ++  +NL  N IG EG    A+ LK N  + T+DLG N+I   G +A
Sbjct: 125 GAVALAEMLKHNTNIEELNLAANSIGGEGVVAFAEMLKHNTALKTLDLGDNSITPVGGTA 184

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +   L  N  +  LD+  N      A+A    L     I T+   W       A F  + 
Sbjct: 185 LGAALDQNRTLEGLDIKGNSAAT--ARAFGAALPVDREIGTI---WYDDKEGKAAF--NE 237

Query: 495 LRYNNTISIL---------DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            R  N I  +          L  N L D   + +A++ K  N  L  + L  N I D GA
Sbjct: 238 ARKKNKIRAIANNTCGDEVRLVGNDLGDSETREVAEALKD-NTCLKELILVHNSISDKGA 296

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
            A+A+ LK N+  ++T LNL  N ++  G  AL +
Sbjct: 297 VALAKVLKHNK--SLTELNLQGNSISVEGAVALAE 329


>gi|320166084|gb|EFW42983.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 543

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 200/370 (54%), Gaps = 1/370 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           MS     D     +AE+L  N T   +S  +N + AAG +A    L+ N  +  L L  N
Sbjct: 1   MSDIQADDADAQTIAEALKVNTTVTWLSLRSNRVGAAGAQALAEALKVNTTVTQLYLGDN 60

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD+G   +   L  N  V RL +S  ++ D G +AIAE L+ N+ + VL L  N I  
Sbjct: 61  RIGDDGAGAIAAALTVNMTVTRLDMSINEIGDAGVQAIAEALRVNTTVIVLRLYANQIHD 120

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  +LAEAL  N T+  L+L  N  G +GA A+A+ L+ N +L   +L GN IGD G +
Sbjct: 121 VGAQALAEALSVNKTVTQLYLQLNQIGDVGAQAIAEALKVNTALTVPNLGGNRIGDAGAQ 180

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+   L      +  L +  N I   GA  +AE +K   +L  +NL  N IGD GA+ IA
Sbjct: 181 AIAEALKVNV-TVTELSLHTNQIGDAGAQAIAEALKVSPTLTKLNLNENQIGDAGAQAIA 239

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            ALK N+T+TT+ L  N I + G   IA  L+ N+V+T LDL  N     GA+A++EVLK
Sbjct: 240 QALKLNQTLTTLYLVRNRIGNVGVQPIAEALQTNTVLTHLDLGENQFADAGAQAIAEVLK 299

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
            +  +  L L   QIG  GAE +A+ L+ N T++ L+LR+N + +  A+ + ++  V  +
Sbjct: 300 VNKRLAWLNLPDNQIGDVGAEAIAEALKVNTTLTYLNLRSNCIGNTFARAIDEAHHVNGQ 359

Query: 529 ALTSIDLAFN 538
           +   ID   N
Sbjct: 360 STVDIDNQIN 369



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/329 (37%), Positives = 183/329 (55%), Gaps = 4/329 (1%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +S +   D  A+ IAE LK N+ +  L L +N +  +G  +LAEAL  N+T+  L+L  N
Sbjct: 1   MSDIQADDADAQTIAEALKVNTTVTWLSLRSNRVGAAGAQALAEALKVNTTVTQLYLGDN 60

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G  GA A+A  L  N ++  L +  N IGD G++A+   L      + VL +  N I 
Sbjct: 61  RIGDDGAGAIAAALTVNMTVTRLDMSINEIGDAGVQAIAEALRVNT-TVIVLRLYANQIH 119

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             GA  +AE +   K++  + L +N IGD GA+ IA+ALK N  +T  +LGGN I   GA
Sbjct: 120 DVGAQALAEALSVNKTVTQLYLQLNQIGDVGAQAIAEALKVNTALTVPNLGGNRIGDAGA 179

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            AIA  LK N  +T L L  N IG  GA+A++E LK    +  L L   QIG +GA+ +A
Sbjct: 180 QAIAEALKVNVTVTELSLHTNQIGDAGAQAIAEALKVSPTLTKLNLNENQIGDAGAQAIA 239

Query: 493 DMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
             L+ N T++ L L  N + + G + +A++ +  N  LT +DL  N+  D GA AIA+ L
Sbjct: 240 QALKLNQTLTTLYLVRNRIGNVGVQPIAEALQ-TNTVLTHLDLGENQFADAGAQAIAEVL 298

Query: 553 KANEDVAVTSLNLANNFLTKFGQSALTDA 581
           K N+ +A   LNL +N +   G  A+ +A
Sbjct: 299 KVNKRLA--WLNLPDNQIGDVGAEAIAEA 325



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 185/339 (54%), Gaps = 4/339 (1%)

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
           D   + + + L  N  V  L L S  +   GA+A+AE LK N+ +  L L +N I   G 
Sbjct: 8   DADAQTIAEALKVNTTVTWLSLRSNRVGAAGAQALAEALKVNTTVTQLYLGDNRIGDDGA 67

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            ++A AL  N T+  L ++ N  G  G  A+A+ L  N ++  L L+ N I D G +AL 
Sbjct: 68  GAIAAALTVNMTVTRLDMSINEIGDAGVQAIAEALRVNTTVIVLRLYANQIHDVGAQALA 127

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             LS  K  +  L +  N I   GA  +AE +K   +L   NL  N IGD GA+ IA+AL
Sbjct: 128 EALSVNK-TVTQLYLQLNQIGDVGAQAIAEALKVNTALTVPNLGGNRIGDAGAQAIAEAL 186

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           K N T+T + L  N I   GA AIA  LK +  +T L+L  N IG  GA+A+++ LK + 
Sbjct: 187 KVNVTVTELSLHTNQIGDAGAQAIAEALKVSPTLTKLNLNENQIGDAGAQAIAQALKLNQ 246

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALT 531
            + TL L   +IG  G + +A+ L+ N  ++ LDL  N   D GA+ +A+  K VN+ L 
Sbjct: 247 TLTTLYLVRNRIGNVGVQPIAEALQTNTVLTHLDLGENQFADAGAQAIAEVLK-VNKRLA 305

Query: 532 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
            ++L  N+I D GA AIA+ALK N    +T LNL +N +
Sbjct: 306 WLNLPDNQIGDVGAEAIAEALKVN--TTLTYLNLRSNCI 342



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 70/148 (47%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           LS  T ++     Q + E  K     + ++++    GD G   +A++L  NQT   +   
Sbjct: 195 LSLHTNQIGDAGAQAIAEALKVSPTLTKLNLNENQIGDAGAQAIAQALKLNQTLTTLYLV 254

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G++     LQ+N  L  L+L  N   D G + + ++L  N  +  L L    +
Sbjct: 255 RNRIGNVGVQPIAEALQTNTVLTHLDLGENQFADAGAQAIAEVLKVNKRLAWLNLPDNQI 314

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMI 286
            D GA+AIAE LK N+ L  L L +N I
Sbjct: 315 GDVGAEAIAEALKVNTTLTYLNLRSNCI 342


>gi|320162675|gb|EFW39574.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 925

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 227/469 (48%), Gaps = 32/469 (6%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+   + E  KE R    +D+S    GD G   +  +L        +  + N I   G +
Sbjct: 32  ETAVVIAEGLKENRNLQMLDLSDNQIGDAGAQAIGAALRKKTKLSVLLLSNNKIGETGAR 91

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    LQ++ AL  L +  N IGD G + +   L D A +  L L S  + D GA+AIAE
Sbjct: 92  AIAEGLQTSTALTQLGMHTNQIGDAGAQAIGPALRDKAKLSLLHLESNKIGDAGARAIAE 151

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK ++ L  L +  N++  +G  ++   L   +++  L+L+ N  G  GA A+A GL+ 
Sbjct: 152 GLKTSTTLTKLGMRANLVGDAGAQAIGSVLRNKASLTGLYLDKNTIGDTGARAIADGLQT 211

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
             +L EL ++ N IGD G +A+ + L + K  L++L + +N I   GA  +AE ++   +
Sbjct: 212 TTALTELRMNANQIGDAGAQAIGTALRN-KANLSLLYLNSNRIGDSGAIAIAEGMQMSTA 270

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT-- 446
           L+ + +  N IGD GA+ IA  L+    ++ + L  N +   GA A+A  L+ ++ +T  
Sbjct: 271 LIDLRMNTNQIGDAGAQAIASTLRNKANLSILYLDENKVGDAGARAVAEGLQVSTALTRL 330

Query: 447 --------------------------SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
                                      L L+ N IG  GA+A++E L+    +  L +  
Sbjct: 331 GMDSNRIGHAGAQAIAAALRNKANLSRLSLSNNKIGDTGAQAIAESLQTATALTELGMQT 390

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
             IG +GA+ +   LR    +SIL L  N + D GA+ +A+  + ++ ALT   +  N+I
Sbjct: 391 NHIGDAGAQAIGSTLRNKANLSILYLHRNKIGDTGARAIAEGLQTLS-ALTDFRMNDNQI 449

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMS 589
            D GA AI  AL+      ++ L+L+NN ++      L+ +     E S
Sbjct: 450 GDAGAHAIGSALR--NKATLSKLSLSNNQISSSAAQLLSQSVPKTCEFS 496



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 223/444 (50%), Gaps = 7/444 (1%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           ++ L E AK   ++S V++      DE    +AE L  N+  + +  + N I  AG +A 
Sbjct: 9   QRELFEIAK---SYSWVNLKSSGIADETAVVIAEGLKENRNLQMLDLSDNQIGDAGAQAI 65

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
              L+    L  L LS N IG+ G + + + L  +  + +L + +  + D GA+AI   L
Sbjct: 66  GAALRKKTKLSVLLLSNNKIGETGARAIAEGLQTSTALTQLGMHTNQIGDAGAQAIGPAL 125

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           ++ + L +L L +N I  +G  ++AE L  ++T+  L +  N  G  GA A+   L    
Sbjct: 126 RDKAKLSLLHLESNKIGDAGARAIAEGLKTSTTLTKLGMRANLVGDAGAQAIGSVLRNKA 185

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           SL  L+L  N+IGD G RA+  GL +    L  L +  N I   GA  +   ++N  +L 
Sbjct: 186 SLTGLYLDKNTIGDTGARAIADGLQTTTA-LTELRMNANQIGDAGAQAIGTALRNKANLS 244

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + L  N IGD GA  IA+ ++ +  +  + +  N I   GA AIA  L++ + ++ L L
Sbjct: 245 LLYLNSNRIGDSGAIAIAEGMQMSTALIDLRMNTNQIGDAGAQAIASTLRNKANLSILYL 304

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
             N +G  GA+A++E L+    +  L +   +IG +GA+ +A  LR    +S L L  N 
Sbjct: 305 DENKVGDAGARAVAEGLQVSTALTRLGMDSNRIGHAGAQAIAAALRNKANLSRLSLSNNK 364

Query: 511 LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           + D GA+ +A+S +    ALT + +  N I D GA AI   L+   ++++  L L  N +
Sbjct: 365 IGDTGAQAIAESLQTAT-ALTELGMQTNHIGDAGAQAIGSTLRNKANLSI--LYLHRNKI 421

Query: 571 TKFGQSALTDAKDLVYEMSEKEVN 594
              G  A+ +    +  +++  +N
Sbjct: 422 GDTGARAIAEGLQTLSALTDFRMN 445



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/408 (30%), Positives = 202/408 (49%), Gaps = 3/408 (0%)

Query: 121 SKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLF 180
           ++  AEG+  S       L   T ++     Q +    ++    S + +     GD G  
Sbjct: 90  ARAIAEGLQTSTA--LTQLGMHTNQIGDAGAQAIGPALRDKAKLSLLHLESNKIGDAGAR 147

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            +AE L  + T  ++   AN +  AG +A   VL++  +L  L L  N IGD G + + D
Sbjct: 148 AIAEGLKTSTTLTKLGMRANLVGDAGAQAIGSVLRNKASLTGLYLDKNTIGDTGARAIAD 207

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L     +  L++++  + D GA+AI   L+N + L +L LN+N I  SG  ++AE +  
Sbjct: 208 GLQTTTALTELRMNANQIGDAGAQAIGTALRNKANLSLLYLNSNRIGDSGAIAIAEGMQM 267

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           ++ +  L +N N  G  GA A+A  L    +L  L+L  N +GD G RA+  GL      
Sbjct: 268 STALIDLRMNTNQIGDAGAQAIASTLRNKANLSILYLDENKVGDAGARAVAEGLQVSTA- 326

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  L + +N I   GA  +A  ++N  +L  ++L  N IGD GA+ IA++L+    +T +
Sbjct: 327 LTRLGMDSNRIGHAGAQAIAAALRNKANLSRLSLSNNKIGDTGAQAIAESLQTATALTEL 386

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            +  N+I   GA AI   L++ + ++ L L  N IG  GA+A++E L+    +   ++  
Sbjct: 387 GMQTNHIGDAGAQAIGSTLRNKANLSILYLHRNKIGDTGARAIAEGLQTLSALTDFRMND 446

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
            QIG +GA  +   LR   T+S L L  N +    A+ L+QS     E
Sbjct: 447 NQIGDAGAHAIGSALRNKATLSKLSLSNNQISSSAAQLLSQSVPKTCE 494


>gi|452819047|gb|EME26151.1| FBox-LRR protein [Galdieria sulphuraria]
          Length = 667

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 192/336 (57%), Gaps = 3/336 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           +NLS   I  EGV+ L + L  N  +  L + S  +  EG + ++E LK N+ L  L++N
Sbjct: 1   MNLSLKSISSEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDIN 60

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           NN I   G   L+EAL  N+T+  L +  N   + G   L++ L+ N +L EL +  N I
Sbjct: 61  NNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNKI 120

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
             EG++ L   L      L  LDI NN+I+++G  +++E +K   +L  +++  N++  E
Sbjct: 121 ALEGVQYLSEALKVN-NTLTELDINNNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASE 179

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           G + +++ALK N T+T +D+  N I  +G   ++  LK N+ +T LD+ YN + ++G + 
Sbjct: 180 GVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTKLDIGYNNVDSEGVQY 239

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           LSE LK +  +  L +G+  I + G +++++ L+ NNT++ L++  N +  EGA+ L+++
Sbjct: 240 LSEALKVNNTLTKLDIGYNNIASEGVQYLSEALKVNNTLTKLNIVCNNVASEGAQYLSEA 299

Query: 523 FKVVNEALTSIDLAFNEI-RDDGAFAIAQALKANED 557
            K VN  LT +D++ N I  +D    I   LK N++
Sbjct: 300 LK-VNNTLTELDISGNAIPSEDIRAKIHPYLKRNQE 334



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 183/351 (52%), Gaps = 29/351 (8%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S ++   EG+ +L+E+L  N T  E+   +N I   G++     L+ N  L  L+++
Sbjct: 1   MNLSLKSISSEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDIN 60

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EGV+ L + L  N  + +L +   ++  EG + ++E LK N+ L  L++ +N I
Sbjct: 61  NNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNKI 120

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   L+EAL  N+T+  L +N N   + G   L++ L+ N +L +L +  N++  EG
Sbjct: 121 ALEGVQYLSEALKVNNTLTELDINNNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASEG 180

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           ++ L   L      L  LDI +N I+                             EG + 
Sbjct: 181 VQYLSEALKVN-NTLTELDIRSNKIAL----------------------------EGVQY 211

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           +++ALK N T+T +D+G NN+ S+G   ++  LK N+ +T LD+ YN I ++G + LSE 
Sbjct: 212 LSEALKVNNTLTKLDIGYNNVDSEGVQYLSEALKVNNTLTKLDIGYNNIASEGVQYLSEA 271

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           LK +  +  L +    + + GA+++++ L+ NNT++ LD+  N +  E  +
Sbjct: 272 LKVNNTLTKLNIVCNNVASEGAQYLSEALKVNNTLTELDISGNAIPSEDIR 322



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 169/314 (53%), Gaps = 1/314 (0%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  Q L+E  K     + +D+       EG+ +L+E+L  N T  E+    N I + G++
Sbjct: 11  EGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDINNNNIASEGVQ 70

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                L+ N  L  L++  N +  EGV+ L + L  N  +  L + S  +  EG + ++E
Sbjct: 71  YLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSE 130

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N+ L  L++NNN I   G   L+EAL  N+T+  L +  N   + G   L++ L+ 
Sbjct: 131 ALKVNNTLTELDINNNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKV 190

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L EL +  N I  EG++ L   L      L  LDIG N++ ++G  +++E +K   +
Sbjct: 191 NNTLTELDIRSNKIALEGVQYLSEALKVN-NTLTKLDIGYNNVDSEGVQYLSEALKVNNT 249

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  +++  N+I  EG + +++ALK N T+T +++  NN+ S+GA  ++  LK N+ +T L
Sbjct: 250 LTKLDIGYNNIASEGVQYLSEALKVNNTLTKLNIVCNNVASEGAQYLSEALKVNNTLTEL 309

Query: 449 DLAYNPIGADGAKA 462
           D++ N I ++  +A
Sbjct: 310 DISGNAIPSEDIRA 323



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 161/301 (53%), Gaps = 2/301 (0%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           + K+  E  Q L+E  K     + +D++  N   EG+ +L+E+L  N T  ++    N +
Sbjct: 33  SNKIALEGVQYLSEALKVNNTLTELDINNNNIASEGVQYLSEALKVNNTLTKLDIGYNNV 92

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
            + G++     L+ N  L  L++  N I  EGV+ L + L  N  +  L +++ ++  EG
Sbjct: 93  ASEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDINNNNIASEG 152

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            + ++E LK N+ L  L++  N +   G   L+EAL  N+T+  L +  N     G   L
Sbjct: 153 VQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYL 212

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           ++ L+ N +L +L +  N++  EG++ L   L      L  LDIG N+I+++G  +++E 
Sbjct: 213 SEALKVNNTLTKLDIGYNNVDSEGVQYLSEALKVN-NTLTKLDIGYNNIASEGVQYLSEA 271

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA-IARVLKD 441
           +K   +L  +N+  N++  EGA+ +++ALK N T+T +D+ GN I S+   A I   LK 
Sbjct: 272 LKVNNTLTKLNIVCNNVASEGAQYLSEALKVNNTLTELDISGNAIPSEDIRAKIHPYLKR 331

Query: 442 N 442
           N
Sbjct: 332 N 332



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 142/247 (57%), Gaps = 4/247 (1%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L   SI  EG++ L   L      L  LDI +N I+ +G  +++E +K   +L  +++
Sbjct: 1   MNLSLKSISSEGVQYLSEALKVN-NTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDI 59

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N+I  EG + +++ALK N T+T +D+G NN+ S+G   ++  LK N+ +T LD+  N 
Sbjct: 60  NNNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNK 119

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           I  +G + LSE LK +  +  L +    I + G +++++ L+ NNT++ LD+  N +  E
Sbjct: 120 IALEGVQYLSEALKVNNTLTELDINNNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASE 179

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           G + L+++ KV N  LT +D+  N+I  +G   +++ALK N    +T L++  N +   G
Sbjct: 180 GVQYLSEALKV-NNTLTELDIRSNKIALEGVQYLSEALKVNN--TLTKLDIGYNNVDSEG 236

Query: 575 QSALTDA 581
              L++A
Sbjct: 237 VQYLSEA 243


>gi|320170651|gb|EFW47550.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 513

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/336 (35%), Positives = 182/336 (54%), Gaps = 29/336 (8%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           A ++A    L+ N  L  L++  + + D+G K   + L  N  +  L+L+   + D GAK
Sbjct: 30  ADVQAVAEGLKVNTTLTVLDMKEHHLDDDGAKAFAEALEVNTTLTELRLNQNQIGDAGAK 89

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE LK N+ L  L L  N I  +G  ++AEAL  N+T+R+L+L+ N  G  GA A+A+
Sbjct: 90  AIAEALKVNTTLTKLNLWANQIGEAGAQAIAEALKVNATLRTLYLDRNQIGDAGAKAIAE 149

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L+ N +LR L+L  N  GD G++A                             +A+ ++
Sbjct: 150 ALKVNATLRTLYLDRNQFGDAGVQA-----------------------------IAKALQ 180

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             K+L W+NL    IGD GA+ +A+AL+ N T+  + L  N +   GA AIA  LK N++
Sbjct: 181 VNKTLSWLNLIDKQIGDAGAQALAEALRVNATLAVLYLRENRLGDAGAQAIAEALKSNTM 240

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +T LDL  N IG  GA+A++E LK +  +  L L   QIG  GA+  A+ LR N T+  L
Sbjct: 241 LTFLDLWANQIGEAGAQAIAEALKMNSTLIQLFLNGNQIGDFGAKAFAEALRVNMTVQRL 300

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
           DL  NG+ + GA+ + ++ +V ++   +ID   N +
Sbjct: 301 DLTGNGIGNLGAQAIDEARQVNDKCRVNIDSQINPL 336



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/294 (37%), Positives = 155/294 (52%), Gaps = 4/294 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +DM   +  D+G    AE+L  N T  E+    N I  AG KA    L+ N  L  L
Sbjct: 45  LTVLDMKEHHLDDDGAKAFAEALEVNTTLTELRLNQNQIGDAGAKAIAEALKVNTTLTKL 104

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NL  N IG+ G + + + L  NA +  L L    + D GAKAIAE LK N+ LR L L+ 
Sbjct: 105 NLWANQIGEAGAQAIAEALKVNATLRTLYLDRNQIGDAGAKAIAEALKVNATLRTLYLDR 164

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N    +G  ++A+AL  N T+  L+L     G  GA ALA+ L  N +L  L+L  N +G
Sbjct: 165 NQFGDAGVQAIAKALQVNKTLSWLNLIDKQIGDAGAQALAEALRVNATLAVLYLRENRLG 224

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G +A+   L S    L  LD+  N I   GA  +AE +K   +L+ + L  N IGD G
Sbjct: 225 DAGAQAIAEALKSNT-MLTFLDLWANQIGEAGAQAIAEALKMNSTLIQLFLNGNQIGDFG 283

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAI--ARVLKDNSVITSLDLAYNPI 455
           A+  A+AL+ N T+  +DL GN I + GA AI  AR + D   + ++D   NP+
Sbjct: 284 AKAFAEALRVNMTVQRLDLTGNGIGNLGAQAIDEARQVNDKCRV-NIDSQINPL 336



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/289 (36%), Positives = 155/289 (53%), Gaps = 32/289 (11%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++AE L  N+T+  L +  ++    GA A A+ LE N +L EL L+ N IGD G +A   
Sbjct: 34  AVAEGLKVNTTLTVLDMKEHHLDDDGAKAFAEALEVNTTLTELRLNQNQIGDAGAKA--- 90

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
                                     +AE +K   +L  +NL+ N IG+ GA+ IA+ALK
Sbjct: 91  --------------------------IAEALKVNTTLTKLNLWANQIGEAGAQAIAEALK 124

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+ T+ L  N I   GA AIA  LK N+ + +L L  N  G  G +A+++ L+ +  
Sbjct: 125 VNATLRTLYLDRNQIGDAGAKAIAEALKVNATLRTLYLDRNQFGDAGVQAIAKALQVNKT 184

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           ++ L L   QIG +GA+ +A+ LR N T+++L LR N L D GA+ +A++ K  N  LT 
Sbjct: 185 LSWLNLIDKQIGDAGAQALAEALRVNATLAVLYLRENRLGDAGAQAIAEALKS-NTMLTF 243

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           +DL  N+I + GA AIA+ALK N    +  L L  N +  FG  A  +A
Sbjct: 244 LDLWANQIGEAGAQAIAEALKMNS--TLIQLFLNGNQIGDFGAKAFAEA 290



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 65/104 (62%), Gaps = 3/104 (2%)

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           L W ++G +  + VA+ L+ N T+++LD++ + L D+GAK  A++ +V N  LT + L  
Sbjct: 22  LRWDRLGVADVQAVAEGLKVNTTLTVLDMKEHHLDDDGAKAFAEALEV-NTTLTELRLNQ 80

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           N+I D GA AIA+ALK N    +T LNL  N + + G  A+ +A
Sbjct: 81  NQIGDAGAKAIAEALKVN--TTLTKLNLWANQIGEAGAQAIAEA 122


>gi|26350999|dbj|BAC39136.1| unnamed protein product [Mus musculus]
          Length = 397

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/361 (36%), Positives = 198/361 (54%), Gaps = 2/361 (0%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S A N I   G KA    L  N +L TL+L  N IG  G K L D L  N  +  L L S
Sbjct: 4   SLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQS 63

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             ++D+G   +AE L +N  + +L+L  N+I   G   +A+AL +N ++++L  + N  G
Sbjct: 64  NVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIG 123

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA ALA+ L+ N+ L  L L  NSI D G+  LM  L S +  L+ L++  NSIS +G
Sbjct: 124 DRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQ-TLSSLNLRENSISPEG 182

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  + + +    +L  ++L  N + D GA+ IA A+ +N ++T + L  N I +  A A+
Sbjct: 183 AQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARAL 242

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
            + L+ N  +T+LDL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L
Sbjct: 243 GQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEAL 302

Query: 496 RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             N T+ ILDLR N +   GAK LA + K +N +L  ++L  N +  DGA  +A AL  N
Sbjct: 303 TVNRTLEILDLRGNDVGAAGAKALANALK-LNSSLRRLNLQENSLGMDGAIFVASALSEN 361

Query: 556 E 556
            
Sbjct: 362 H 362



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 133/382 (34%), Positives = 202/382 (52%), Gaps = 2/382 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G++G   LA SL  N++   +   +N I   G KA    L+ N  L +L+L  N I D+
Sbjct: 10  IGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDD 69

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           GV C+ + LV N  +  LQL    +   GA+ +A+ LK N  L+ L  ++N I   G  +
Sbjct: 70  GVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIA 129

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LAEAL  N  + +L L  N    +G   L + L  N++L  L+L  NSI  EG +AL   
Sbjct: 130 LAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQA 189

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L  R   L  LD+  N +  +GA  +A  +    SL  ++L  N I    A  +  AL+ 
Sbjct: 190 L-CRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQL 248

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           NRT+TT+DL  N I  +GAS++A  LK N+ + +L L    IG+ GA+AL E L  +  +
Sbjct: 249 NRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTL 308

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
             L L    +GA+GA+ +A+ L+ N+++  L+L+ N L  +GA  +A +    N  L  I
Sbjct: 309 EILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALS-ENHGLHHI 367

Query: 534 DLAFNEIRDDGAFAIAQALKAN 555
           +L  N I +  A  I++A+K N
Sbjct: 368 NLQGNPIGESAARMISEAIKTN 389



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 186/364 (51%), Gaps = 1/364 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+  ++D+   + G  G   LA++L  N+T   +S  +N I   G+      L SN  + 
Sbjct: 26  RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 85

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IG  G + + D L  N  ++ L  SS  + D GA A+AE LK N IL  L+L
Sbjct: 86  MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 145

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I   G T L  AL  N T+ SL+L  N     GA AL + L  N +L+ L L  N 
Sbjct: 146 QSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANL 205

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D G +A+   +      L  L +  N I A  A  + + ++  ++L  ++L  N IGD
Sbjct: 206 LHDRGAQAIAVAVGENH-SLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGD 264

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA  +A ALK N T+  + L   +I S+GA A+   L  N  +  LDL  N +GA GAK
Sbjct: 265 EGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAK 324

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           AL+  LK + ++  L L    +G  GA FVA  L  N+ +  ++L+ N + +  A+ +++
Sbjct: 325 ALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISE 384

Query: 522 SFKV 525
           + K 
Sbjct: 385 AIKT 388



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 168/337 (49%), Gaps = 1/337 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  +S+ +      D+G+  +AE+L  NQT   +    N I   G +     L+ N +LK
Sbjct: 54  RTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLK 113

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L  S N IGD G   L + L  N  +E L L S  + D G   +   L +N  L  L L
Sbjct: 114 ALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 173

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G  +L +AL  N+T++ L L  N     GA A+A  +  N SL  LHL  N 
Sbjct: 174 RENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNF 233

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I     RAL   L   +  L  LD+  N+I  +GA  VA  +K   +L+ + L +  IG 
Sbjct: 234 IQAGAARALGQALQLNR-TLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGS 292

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +GA+ + +AL  NRT+  +DL GN++ + GA A+A  LK NS +  L+L  N +G DGA 
Sbjct: 293 QGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAI 352

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            ++  L  +  ++ + L    IG S A  +++ ++ N
Sbjct: 353 FVASALSENHGLHHINLQGNPIGESAARMISEAIKTN 389



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 1/299 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + +  K+ R+  ++  S    GD G   LAE+L  NQ  E +   +N I+  G+    
Sbjct: 100 QQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLM 159

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L SN  L +LNL  N I  EG + L   L  N  ++ L L++  L D GA+AIA  + 
Sbjct: 160 RALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVG 219

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L  N I      +L +AL  N T+ +L L  N  G  GA+++A  L+ N +
Sbjct: 220 ENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTT 279

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L+L   SIG +G +AL   L+  +  L +LD+  N + A GA  +A  +K   SL  
Sbjct: 280 LIALYLQVASIGSQGAQALGEALTVNR-TLEILDLRGNDVGAAGAKALANALKLNSSLRR 338

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           +NL  N +G +GA  +A AL +N  +  I+L GN I    A  I+  +K N+   ++++
Sbjct: 339 LNLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVEI 397



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 3/188 (1%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IG++GA+ +A +L  NR++ T+DL  N+I   GA A+A  LK N  +TSL L  N
Sbjct: 5   LAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSN 64

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            I  DG   ++E L  +  I+ L+L    IG  GA+ +AD L+ N ++  L   +N + D
Sbjct: 65  VIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGD 124

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA  LA++ KV N+ L ++DL  N I D G   + +AL +N+   ++SLNL  N ++  
Sbjct: 125 RGAIALAEALKV-NQILENLDLQSNSISDMGVTVLMRALCSNQ--TLSSLNLRENSISPE 181

Query: 574 GQSALTDA 581
           G  ALT A
Sbjct: 182 GAQALTQA 189



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 94/202 (46%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  Q L +          +D++     D G   +A ++G N +   +    N I A   +
Sbjct: 181 EGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAAR 240

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    LQ N  L TL+L  N IGDEG   +   L  N  +  L L    +  +GA+A+ E
Sbjct: 241 ALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGE 300

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L  N  L +L+L  N +  +G  +LA AL  NS++R L+L  N  G  GA  +A  L  
Sbjct: 301 ALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSE 360

Query: 329 NKSLRELHLHGNSIGDEGIRAL 350
           N  L  ++L GN IG+   R +
Sbjct: 361 NHGLHHINLQGNPIGESAARMI 382


>gi|320166877|gb|EFW43776.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1057

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 219/418 (52%), Gaps = 7/418 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + +DM+     D G   +AE L    T+  +    N I  AG +A    L++ ++L  
Sbjct: 51  SLAHLDMNDNKISDAGACAIAEGL---TTSTALKIDTNQIGDAGAQAIGSALRNKLSLAH 107

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N IGD G + + + L  + G+  L +    + + GA+AI    +N + L +L+L 
Sbjct: 108 LDLSNNKIGDAGARAIAEGLQTSTGLLSLNIYGNQIGNAGAQAIGSSFRNKANLCILDLR 167

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           NN I  +G  ++AE L  ++ + SL++ GN  G  GA A+        +L+ L L  N I
Sbjct: 168 NNKIGDAGARAIAEGLQTSTGLLSLNMYGNQIGNAGAQAIGSSFRNKAALKILQLGSNKI 227

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G RA+ +GL  +   L    +  N I   GA  +   ++N  +L  ++L  N IGD 
Sbjct: 228 GDVGARAIAAGL-RKSAALIYCCMQANQIGDAGAQAIGFALRNKANLSELSLEANKIGDA 286

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  IA+ L+ + ++T + +  N I   GA AI   L++ + ++ L L+ N IG  GA+A
Sbjct: 287 GACAIAEGLQMSTSLTQLRMQTNYIGDAGAQAIGYALRNKAKLSVLYLSENRIGDAGARA 346

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           ++E L    ++   K+    IG +GA+ +   LR    +S+L L  N + D GA  +A+ 
Sbjct: 347 VAEGLHTSTSLTDFKMQANYIGNAGAQAIGSALRKTANLSLLSLTNNKIGDTGASAIAEG 406

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
            +  + ALT + +  N+I D+GA AI  AL+   ++++  L+LA N +   G SA+ +
Sbjct: 407 LQ-ASTALTQLGMHANQIGDEGAQAIGSALRNKPNLSL--LDLAKNKIGDTGASAIAE 461



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 204/389 (52%), Gaps = 4/389 (1%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S++M G   G+ G   +  S       + +   +N I   G +A    L+ + AL    +
Sbjct: 191 SLNMYGNQIGNAGAQAIGSSFRNKAALKILQLGSNKIGDVGARAIAAGLRKSAALIYCCM 250

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             N IGD G + +   L + A +  L L +  + D GA AIAE L+ ++ L  L +  N 
Sbjct: 251 QANQIGDAGAQAIGFALRNKANLSELSLEANKIGDAGACAIAEGLQMSTSLTQLRMQTNY 310

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I  +G  ++  AL   + +  L+L+ N  G  GA A+A+GL  + SL +  +  N IG+ 
Sbjct: 311 IGDAGAQAIGYALRNKAKLSVLYLSENRIGDAGARAVAEGLHTSTSLTDFKMQANYIGNA 370

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G +A+ S L  +   L++L + NN I   GA  +AE ++   +L  + ++ N IGDEGA+
Sbjct: 371 GAQAIGSALR-KTANLSLLSLTNNKIGDTGASAIAEGLQASTALTQLGMHANQIGDEGAQ 429

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            I  AL+    ++ +DL  N I   GASAIA  L+ ++ +T   +  N IG  GA+A+  
Sbjct: 430 AIGSALRNKPNLSLLDLAKNKIGDTGASAIAEGLQGSTALTRFGMNNNQIGNVGAQAIGS 489

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+   ++  + LG  +IG +GA  +AD LR +  +  L + AN + D GA+ +  + + 
Sbjct: 490 ALRNKADLAIVHLGSNKIGDAGACAIADGLRSSTALLALGMHANHIGDTGAQAIGSALR- 548

Query: 526 VNEA-LTSIDLAFNEIRDDGAFAIAQALK 553
            N+A L+ + +  N+I D GA AIA+ L+
Sbjct: 549 -NKANLSVLLMGSNKIGDAGACAIAEGLQ 576



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 199/387 (51%), Gaps = 2/387 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M     GD G   +  +L       E+S  AN I  AG  A    LQ + +L  L +  N
Sbjct: 250 MQANQIGDAGAQAIGFALRNKANLSELSLEANKIGDAGACAIAEGLQMSTSLTQLRMQTN 309

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + +   L + A +  L LS   + D GA+A+AE L  ++ L   ++  N I  
Sbjct: 310 YIGDAGAQAIGYALRNKAKLSVLYLSENRIGDAGARAVAEGLHTSTSLTDFKMQANYIGN 369

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++  AL + + +  L L  N  G  GA+A+A+GL+ + +L +L +H N IGDEG +
Sbjct: 370 AGAQAIGSALRKTANLSLLSLTNNKIGDTGASAIAEGLQASTALTQLGMHANQIGDEGAQ 429

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+ S L + K  L++LD+  N I   GA  +AE ++   +L    +  N IG+ GA+ I 
Sbjct: 430 AIGSALRN-KPNLSLLDLAKNKIGDTGASAIAEGLQGSTALTRFGMNNNQIGNVGAQAIG 488

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            AL+    +  + LG N I   GA AIA  L+ ++ + +L +  N IG  GA+A+   L+
Sbjct: 489 SALRNKADLAIVHLGSNKIGDAGACAIADGLRSSTALLALGMHANHIGDTGAQAIGSALR 548

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
              N++ L +G  +IG +GA  +A+ L+ +  ++   +  N + D GA  +  S +   +
Sbjct: 549 NKANLSVLLMGSNKIGDAGACAIAEGLQTSTALTDFKMHINQIGDAGALAIESSLRNKPQ 608

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKAN 555
            L  + L+ N+I       ++Q++ A+
Sbjct: 609 -LAILHLSRNQISASAVQRLSQSIPAD 634



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 203/418 (48%), Gaps = 4/418 (0%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + +D+S    GD G   +AE L  +     ++   N I  AG +A     ++   L  
Sbjct: 104 SLAHLDLSNNKIGDAGARAIAEGLQTSTGLLSLNIYGNQIGNAGAQAIGSSFRNKANLCI 163

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  N IGD G + + + L  + G+  L +    + + GA+AI    +N + L++L+L 
Sbjct: 164 LDLRNNKIGDAGARAIAEGLQTSTGLLSLNMYGNQIGNAGAQAIGSSFRNKAALKILQLG 223

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G  ++A  L +++ +    +  N  G  GA A+   L    +L EL L  N I
Sbjct: 224 SNKIGDVGARAIAAGLRKSAALIYCCMQANQIGDAGAQAIGFALRNKANLSELSLEANKI 283

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G  A+  GL      L  L +  N I   GA  +   ++N   L  + L  N IGD 
Sbjct: 284 GDAGACAIAEGLQMST-SLTQLRMQTNYIGDAGAQAIGYALRNKAKLSVLYLSENRIGDA 342

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  +A+ L  + ++T   +  N I + GA AI   L+  + ++ L L  N IG  GA A
Sbjct: 343 GARAVAEGLHTSTSLTDFKMQANYIGNAGAQAIGSALRKTANLSLLSLTNNKIGDTGASA 402

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           ++E L+    +  L +   QIG  GA+ +   LR    +S+LDL  N + D GA  +A+ 
Sbjct: 403 IAEGLQASTALTQLGMHANQIGDEGAQAIGSALRNKPNLSLLDLAKNKIGDTGASAIAEG 462

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
            +  + ALT   +  N+I + GA AI  AL+   D+A+  ++L +N +   G  A+ D
Sbjct: 463 LQ-GSTALTRFGMNNNQIGNVGAQAIGSALRNKADLAI--VHLGSNKIGDAGACAIAD 517



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 198/369 (53%), Gaps = 9/369 (2%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L+ L+L  N IGD G + +   L +   +  L ++   + D GA AIAE L  +
Sbjct: 18  LKENSILQRLDLCDNQIGDAGAQAIGSALRNKLSLAHLDMNDNKISDAGACAIAEGLTTS 77

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L++   + N I  +G  ++  AL    ++  L L+ N  G  GA A+A+GL+ +  L 
Sbjct: 78  TALKI---DTNQIGDAGAQAIGSALRNKLSLAHLDLSNNKIGDAGARAIAEGLQTSTGLL 134

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L+++GN IG+ G +A+ S   + K  L +LD+ NN I   GA  +AE ++    LL +N
Sbjct: 135 SLNIYGNQIGNAGAQAIGSSFRN-KANLCILDLRNNKIGDAGARAIAEGLQTSTGLLSLN 193

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +Y N IG+ GA+ I  + +    +  + LG N I   GA AIA  L+ ++ +    +  N
Sbjct: 194 MYGNQIGNAGAQAIGSSFRNKAALKILQLGSNKIGDVGARAIAAGLRKSAALIYCCMQAN 253

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A+   L+   N++ L L   +IG +GA  +A+ L+ + +++ L ++ N + D
Sbjct: 254 QIGDAGAQAIGFALRNKANLSELSLEANKIGDAGACAIAEGLQMSTSLTQLRMQTNYIGD 313

Query: 514 EGAKCLAQSFKVVNEA-LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
            GA+ +  + +  N+A L+ + L+ N I D GA A+A+ L  +   ++T   +  N++  
Sbjct: 314 AGAQAIGYALR--NKAKLSVLYLSENRIGDAGARAVAEGL--HTSTSLTDFKMQANYIGN 369

Query: 573 FGQSALTDA 581
            G  A+  A
Sbjct: 370 AGAQAIGSA 378



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 186/347 (53%), Gaps = 14/347 (4%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +S + + DE A  IAE LK NSIL+ L+L +N I  +G  ++  AL    ++  L +N N
Sbjct: 1   MSKLGITDEDALVIAEGLKENSILQRLDLCDNQIGDAGAQAIGSALRNKLSLAHLDMNDN 60

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                GA A+A+GL  + +L+   +  N IGD G +A+ S L + K  LA LD+ NN I 
Sbjct: 61  KISDAGACAIAEGLTTSTALK---IDTNQIGDAGAQAIGSALRN-KLSLAHLDLSNNKIG 116

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             GA  +AE ++    LL +N+Y N IG+ GA+ I  + +    +  +DL  N I   GA
Sbjct: 117 DAGARAIAEGLQTSTGLLSLNIYGNQIGNAGAQAIGSSFRNKANLCILDLRNNKIGDAGA 176

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            AIA  L+ ++ + SL++  N IG  GA+A+    +    +  L+LG  +IG  GA  +A
Sbjct: 177 RAIAEGLQTSTGLLSLNMYGNQIGNAGAQAIGSSFRNKAALKILQLGSNKIGDVGARAIA 236

Query: 493 DMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA-LTSIDLAFNEIRDDGAFAIAQA 551
             LR +  +    ++AN + D GA+ +   F + N+A L+ + L  N+I D GA AIA+ 
Sbjct: 237 AGLRKSAALIYCCMQANQIGDAGAQAIG--FALRNKANLSELSLEANKIGDAGACAIAEG 294

Query: 552 LKANEDVAVTSLNLANNFLTKFGQSAL-----TDAKDLVYEMSEKEV 593
           L+ +   ++T L +  N++   G  A+       AK  V  +SE  +
Sbjct: 295 LQMS--TSLTQLRMQTNYIGDAGAQAIGYALRNKAKLSVLYLSENRI 339



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 123/257 (47%), Gaps = 2/257 (0%)

Query: 134 AGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           A  +LLS    K+       + E  +   A + + M     GDEG   +  +L       
Sbjct: 383 ANLSLLSLTNNKIGDTGASAIAEGLQASTALTQLGMHANQIGDEGAQAIGSALRNKPNLS 442

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +  A N I   G  A    LQ + AL    ++ N IG+ G + +   L + A +  + L
Sbjct: 443 LLDLAKNKIGDTGASAIAEGLQGSTALTRFGMNNNQIGNVGAQAIGSALRNKADLAIVHL 502

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
            S  + D GA AIA+ L++++ L  L ++ N I  +G  ++  AL   + +  L +  N 
Sbjct: 503 GSNKIGDAGACAIADGLRSSTALLALGMHANHIGDTGAQAIGSALRNKANLSVLLMGSNK 562

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G  GA A+A+GL+ + +L +  +H N IGD G  A+ S L + K +LA+L +  N ISA
Sbjct: 563 IGDAGACAIAEGLQTSTALTDFKMHINQIGDAGALAIESSLRN-KPQLAILHLSRNQISA 621

Query: 374 KGAFHVAEYIK-NCKSL 389
                +++ I  +C+ L
Sbjct: 622 SAVQRLSQSIPADCEFL 638


>gi|320170762|gb|EFW47661.1| hypothetical protein CAOG_05599 [Capsaspora owczarzaki ATCC 30864]
          Length = 370

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 136/384 (35%), Positives = 205/384 (53%), Gaps = 40/384 (10%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  ++ LNL  N IGD G + + + L  N  V  L+L+   + D GA+AIAE L+ N
Sbjct: 22  LKGNPNVEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQIGDAGARAIAETLRVN 81

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + +  L L  N I  +G  +L+ AL  N T+  + LNGN  G  GA A+A+ L  N ++ 
Sbjct: 82  TTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQVGDAGAQAIAEMLRVNTTVT 141

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L+ N +GD                              GA  +AE ++  K L  + 
Sbjct: 142 RLSLYNNKLGD-----------------------------AGATTIAEMLQVNKILTSLG 172

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IGD GA  +A+ALK N ++  +DLG   I +  A  +A VL+ N+ +T L L   
Sbjct: 173 LDYNQIGDAGANAVAEALKVNTSLQALDLG--KIGNAAAQTMAEVLQMNTTLTHLSLGL- 229

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG   A+A++E LK +  +  L L   QIG +GA+ +AD L+ N T+S L L+ N + +
Sbjct: 230 -IGDAEAQAIAEALKVNTTLTGLSLCCNQIGDAGAKTIADALKVNTTLSRLWLKQNQIGN 288

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA+ +A++ K VN  LT + L+ NEI + GA AIA+ALK N    +T L L NN +   
Sbjct: 289 AGAQAIAEALK-VNTRLTHLGLSENEIGNAGAQAIAEALKVNS--TLTRLFLENNQIGDA 345

Query: 574 GQSALTDAKDLVYEMSEKEVNIFF 597
           G  A+ +A    ++M+ K V+I++
Sbjct: 346 GAQAVAEA----FKMNPKLVDIWY 365



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/354 (35%), Positives = 188/354 (53%), Gaps = 5/354 (1%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           ++  D     +AE L  N   E+++   N I  AG +A    L+ N+ +  L L+ N IG
Sbjct: 8   KHIDDADAQAIAEGLKGNPNVEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQIG 67

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
           D G + + + L  N  V  L L    + D GA A++  LK N  L  ++LN N +  +G 
Sbjct: 68  DAGARAIAETLRVNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQVGDAGA 127

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            ++AE L  N+T+  L L  N  G  GA  +A+ L+ NK L  L L  N IGD G  A+ 
Sbjct: 128 QAIAEMLRVNTTVTRLSLYNNKLGDAGATTIAEMLQVNKILTSLGLDYNQIGDAGANAVA 187

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L      L  LD+G   I    A  +AE ++   +L  ++L +  IGD  A+ IA+AL
Sbjct: 188 EALKVNT-SLQALDLG--KIGNAAAQTMAEVLQMNTTLTHLSLGL--IGDAEAQAIAEAL 242

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           K N T+T + L  N I   GA  IA  LK N+ ++ L L  N IG  GA+A++E LK + 
Sbjct: 243 KVNTTLTGLSLCCNQIGDAGAKTIADALKVNTTLSRLWLKQNQIGNAGAQAIAEALKVNT 302

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            +  L L   +IG +GA+ +A+ L+ N+T++ L L  N + D GA+ +A++FK+
Sbjct: 303 RLTHLGLSENEIGNAGAQAIAEALKVNSTLTRLFLENNQIGDAGAQAVAEAFKM 356



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 122/335 (36%), Positives = 178/335 (53%), Gaps = 5/335 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              +++     GD G   +AE+L  N T  E+    N I  AG +A    L+ N  +  L
Sbjct: 28  VEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQIGDAGARAIAETLRVNTTVTDL 87

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N IGD G   L   L  N  + ++ L+   + D GA+AIAE+L+ N+ +  L L N
Sbjct: 88  GLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQVGDAGAQAIAEMLRVNTTVTRLSLYN 147

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +  +G T++AE L  N  + SL L+ N  G  GANA+A+ L+ N SL+ L L    IG
Sbjct: 148 NKLGDAGATTIAEMLQVNKILTSLGLDYNQIGDAGANAVAEALKVNTSLQALDL--GKIG 205

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +   +  M+ +      L  L +G   I    A  +AE +K   +L  ++L  N IGD G
Sbjct: 206 NAAAQT-MAEVLQMNTTLTHLSLG--LIGDAEAQAIAEALKVNTTLTGLSLCCNQIGDAG 262

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+ IADALK N T++ + L  N I + GA AIA  LK N+ +T L L+ N IG  GA+A+
Sbjct: 263 AKTIADALKVNTTLSRLWLKQNQIGNAGAQAIAEALKVNTRLTHLGLSENEIGNAGAQAI 322

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           +E LK +  +  L L   QIG +GA+ VA+  + N
Sbjct: 323 AEALKVNSTLTRLFLENNQIGDAGAQAVAEAFKMN 357



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/317 (36%), Positives = 166/317 (52%), Gaps = 11/317 (3%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           LN    ELR      ++    GD G   +AE+L  N T  ++    N I  AG  A    
Sbjct: 52  LNMTVTELR------LTKNQIGDAGARAIAETLRVNTTVTDLGLWKNQIGDAGAHALSAA 105

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L  ++L+GN +GD G + + ++L  N  V RL L +  L D GA  IAE+L+ N
Sbjct: 106 LKVNKTLIKIDLNGNQVGDAGAQAIAEMLRVNTTVTRLSLYNNKLGDAGATTIAEMLQVN 165

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
            IL  L L+ N I  +G  ++AEAL  N+++++L L G  G A  A  +A+ L+ N +L 
Sbjct: 166 KILTSLGLDYNQIGDAGANAVAEALKVNTSLQALDL-GKIGNA-AAQTMAEVLQMNTTLT 223

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
             HL    IGD   +A+   L      L  L +  N I   GA  +A+ +K   +L  + 
Sbjct: 224 --HLSLGLIGDAEAQAIAEALKVNT-TLTGLSLCCNQIGDAGAKTIADALKVNTTLSRLW 280

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IG+ GA+ IA+ALK N  +T + L  N I + GA AIA  LK NS +T L L  N
Sbjct: 281 LKQNQIGNAGAQAIAEALKVNTRLTHLGLSENEIGNAGAQAIAEALKVNSTLTRLFLENN 340

Query: 454 PIGADGAKALSEVLKFH 470
            IG  GA+A++E  K +
Sbjct: 341 QIGDAGAQAVAEAFKMN 357



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 107/177 (60%), Gaps = 1/177 (0%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +K   ++  +NL  N IGD GA  IA+ LK N T+T + L  N I   GA AIA  
Sbjct: 18  IAEGLKGNPNVEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQIGDAGARAIAET 77

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N+ +T L L  N IG  GA ALS  LK +  +  + L   Q+G +GA+ +A+MLR N
Sbjct: 78  LRVNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQVGDAGAQAIAEMLRVN 137

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            T++ L L  N L D GA  +A+  + VN+ LTS+ L +N+I D GA A+A+ALK N
Sbjct: 138 TTVTRLSLYNNKLGDAGATTIAEMLQ-VNKILTSLGLDYNQIGDAGANAVAEALKVN 193



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 138/287 (48%), Gaps = 56/287 (19%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A A+A+GL+GN ++ +L+L  N IGD G RA                             
Sbjct: 15  AQAIAEGLKGNPNVEKLNLGWNQIGDAGARA----------------------------- 45

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +K   ++  + L  N IGD GA  IA+ L+ N T+T + L  N I   GA A++  
Sbjct: 46  IAETLKLNMTVTELRLTKNQIGDAGARAIAETLRVNTTVTDLGLWKNQIGDAGAHALSAA 105

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK N  +  +DL  N +G  GA+A++E+L+ +  +  L L   ++G +GA  +A+ML+ N
Sbjct: 106 LKVNKTLIKIDLNGNQVGDAGAQAIAEMLRVNTTVTRLSLYNNKLGDAGATTIAEMLQVN 165

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID------------------------ 534
             ++ L L  N + D GA  +A++ K VN +L ++D                        
Sbjct: 166 KILTSLGLDYNQIGDAGANAVAEALK-VNTSLQALDLGKIGNAAAQTMAEVLQMNTTLTH 224

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           L+   I D  A AIA+ALK N    +T L+L  N +   G   + DA
Sbjct: 225 LSLGLIGDAEAQAIAEALKVN--TTLTGLSLCCNQIGDAGAKTIADA 269



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 89/155 (57%), Gaps = 3/155 (1%)

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           +I    A AIA  LK N  +  L+L +N IG  GA+A++E LK +  +  L+L   QIG 
Sbjct: 9   HIDDADAQAIAEGLKGNPNVEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQIGD 68

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
           +GA  +A+ LR N T++ L L  N + D GA  L+ + K VN+ L  IDL  N++ D GA
Sbjct: 69  AGARAIAETLRVNTTVTDLGLWKNQIGDAGAHALSAALK-VNKTLIKIDLNGNQVGDAGA 127

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
            AIA+ L+ N    VT L+L NN L   G + + +
Sbjct: 128 QAIAEMLRVN--TTVTRLSLYNNKLGDAGATTIAE 160



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 1/113 (0%)

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           Y  I    A+A++E LK + N+  L LGW QIG +GA  +A+ L+ N T++ L L  N +
Sbjct: 7   YKHIDDADAQAIAEGLKGNPNVEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQI 66

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            D GA+ +A++ + VN  +T + L  N+I D GA A++ ALK N+ +    LN
Sbjct: 67  GDAGARAIAETLR-VNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLN 118



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 98/221 (44%), Gaps = 24/221 (10%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           LS +  KL      T+ E  +  +  +S+ +     GD G   +AE+L  N + + +   
Sbjct: 143 LSLYNNKLGDAGATTIAEMLQVNKILTSLGLDYNQIGDAGANAVAEALKVNTSLQALDLG 202

Query: 199 ANGITAAGI------------------------KAFDGVLQSNIALKTLNLSGNPIGDEG 234
             G  AA                          +A    L+ N  L  L+L  N IGD G
Sbjct: 203 KIGNAAAQTMAEVLQMNTTLTHLSLGLIGDAEAQAIAEALKVNTTLTGLSLCCNQIGDAG 262

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            K + D L  N  + RL L    + + GA+AIAE LK N+ L  L L+ N I  +G  ++
Sbjct: 263 AKTIADALKVNTTLSRLWLKQNQIGNAGAQAIAEALKVNTRLTHLGLSENEIGNAGAQAI 322

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           AEAL  NST+  L L  N  G  GA A+A+  + N  L ++
Sbjct: 323 AEALKVNSTLTRLFLENNQIGDAGAQAVAEAFKMNPKLVDI 363


>gi|320166420|gb|EFW43319.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 892

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 139/431 (32%), Positives = 221/431 (51%), Gaps = 7/431 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E    + E  KE     ++ + G   GD G   +  +L +      +    N I   G +
Sbjct: 9   EDAVVIAEGLKENLNLQALMLEGNQIGDVGAQAIGSALRHTPKLFILFLGENKIGDIGAR 68

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    +Q   AL  L ++ N IGD G + +   L + AG+  L L    + D GA+AIAE
Sbjct: 69  AIGEGMQMLRALGDLRINANQIGDAGAQAIGAALRNKAGLSILCLEKNKIGDVGARAIAE 128

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L+ + IL  L +N N I  +G  ++  AL   S++  L L  N  G  GA A+A+GL+ 
Sbjct: 129 GLQTSKILGALRINANQIGDAGAQAIGLALRNKSSLAFLELGTNKIGDTGARAIAEGLKK 188

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           + +L  L +  N IGD G +A+ S L + K KLA L + +N I   GA  +AE ++    
Sbjct: 189 SPALTRLLMDKNQIGDAGAQAIGSALRN-KAKLATLHLSSNKIGDTGARAIAESLRTSAE 247

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  + ++ N IGD GA+ I  AL  N+ ++ +DL  N I   GASAIA  L+    +  L
Sbjct: 248 LTELRMHTNQIGDAGAQAIGSALL-NKVLSRLDLAKNKIGDAGASAIADGLQMLRALAHL 306

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           ++  N IG  GA+A+   L+   +++ + LG  +IG +GA  +AD LR +  +  L + A
Sbjct: 307 EMNNNHIGNVGAQAIGSALRNKADLSIVDLGSNKIGDAGACAIADGLRSSTALLTLGMHA 366

Query: 509 NGLRDEGAKCLAQSFKVVNEA-LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           N + D GA+ +  + +  N+A L+ + +  N+I D GA AIA+ L+ +   A+T   +  
Sbjct: 367 NQIGDMGAQAIGSALR--NKANLSVLLMGSNKIGDAGACAIAEGLQTS--TALTDFKMHV 422

Query: 568 NFLTKFGQSAL 578
           N +   G  A+
Sbjct: 423 NQIGDTGALAI 433



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 210/405 (51%), Gaps = 5/405 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + + E  + LRA   + ++    GD G   +  +L        +    N I   G +A  
Sbjct: 68  RAIGEGMQMLRALGDLRINANQIGDAGAQAIGAALRNKAGLSILCLEKNKIGDVGARAIA 127

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             LQ++  L  L ++ N IGD G + +   L + + +  L+L +  + D GA+AIAE LK
Sbjct: 128 EGLQTSKILGALRINANQIGDAGAQAIGLALRNKSSLAFLELGTNKIGDTGARAIAEGLK 187

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +  L  L ++ N I  +G  ++  AL   + + +LHL+ N  G  GA A+A+ L  +  
Sbjct: 188 KSPALTRLLMDKNQIGDAGAQAIGSALRNKAKLATLHLSSNKIGDTGARAIAESLRTSAE 247

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L EL +H N IGD G +A+ S L ++   L+ LD+  N I   GA  +A+ ++  ++L  
Sbjct: 248 LTELRMHTNQIGDAGAQAIGSALLNK--VLSRLDLAKNKIGDAGASAIADGLQMLRALAH 305

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + +  N IG+ GA+ I  AL+    ++ +DLG N I   GA AIA  L+ ++ + +L + 
Sbjct: 306 LEMNNNHIGNVGAQAIGSALRNKADLSIVDLGSNKIGDAGACAIADGLRSSTALLTLGMH 365

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA+A+   L+   N++ L +G  +IG +GA  +A+ L+ +  ++   +  N +
Sbjct: 366 ANQIGDMGAQAIGSALRNKANLSVLLMGSNKIGDAGACAIAEGLQTSTALTDFKMHVNQI 425

Query: 512 RDEGAKCLAQSFKVVNEALTSI-DLAFNEIRDDGAFAIAQALKAN 555
            D GA  +  S +  N+ L +I  L+ N+I       ++Q++ A+
Sbjct: 426 GDTGALAIESSLR--NKPLLAILHLSRNQISASAVQRLSQSIPAD 468



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/412 (31%), Positives = 202/412 (49%), Gaps = 5/412 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           MS     DE    +AE L  N   + +    N I   G +A    L+    L  L L  N
Sbjct: 1   MSKLGITDEDAVVIAEGLKENLNLQALMLEGNQIGDVGAQAIGSALRHTPKLFILFLGEN 60

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + + +     +  L++++  + D GA+AI   L+N + L +L L  N I  
Sbjct: 61  KIGDIGARAIGEGMQMLRALGDLRINANQIGDAGAQAIGAALRNKAGLSILCLEKNKIGD 120

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++AE L  +  + +L +N N  G  GA A+   L    SL  L L  N IGD G R
Sbjct: 121 VGARAIAEGLQTSKILGALRINANQIGDAGAQAIGLALRNKSSLAFLELGTNKIGDTGAR 180

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+  GL  +   L  L +  N I   GA  +   ++N   L  ++L  N IGD GA  IA
Sbjct: 181 AIAEGL-KKSPALTRLLMDKNQIGDAGAQAIGSALRNKAKLATLHLSSNKIGDTGARAIA 239

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           ++L+ +  +T + +  N I   GA AI   L  N V++ LDLA N IG  GA A+++ L+
Sbjct: 240 ESLRTSAELTELRMHTNQIGDAGAQAIGSALL-NKVLSRLDLAKNKIGDAGASAIADGLQ 298

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
               +  L++    IG  GA+ +   LR    +SI+DL +N + D GA  +A   +  + 
Sbjct: 299 MLRALAHLEMNNNHIGNVGAQAIGSALRNKADLSIVDLGSNKIGDAGACAIADGLR-SST 357

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           AL ++ +  N+I D GA AI  AL+   +++V  L + +N +   G  A+ +
Sbjct: 358 ALLTLGMHANQIGDMGAQAIGSALRNKANLSV--LLMGSNKIGDAGACAIAE 407



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 181/356 (50%), Gaps = 2/356 (0%)

Query: 134 AGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           AG ++L     K+     + + E  +  +   ++ ++    GD G   +  +L    +  
Sbjct: 106 AGLSILCLEKNKIGDVGARAIAEGLQTSKILGALRINANQIGDAGAQAIGLALRNKSSLA 165

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +    N I   G +A    L+ + AL  L +  N IGD G + +   L + A +  L L
Sbjct: 166 FLELGTNKIGDTGARAIAEGLKKSPALTRLLMDKNQIGDAGAQAIGSALRNKAKLATLHL 225

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           SS  + D GA+AIAE L+ ++ L  L ++ N I  +G  ++  ALL N  +  L L  N 
Sbjct: 226 SSNKIGDTGARAIAESLRTSAELTELRMHTNQIGDAGAQAIGSALL-NKVLSRLDLAKNK 284

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G  GA+A+A GL+  ++L  L ++ N IG+ G +A+ S L + K  L+++D+G+N I  
Sbjct: 285 IGDAGASAIADGLQMLRALAHLEMNNNHIGNVGAQAIGSALRN-KADLSIVDLGSNKIGD 343

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            GA  +A+ +++  +LL + ++ N IGD GA+ I  AL+    ++ + +G N I   GA 
Sbjct: 344 AGACAIADGLRSSTALLTLGMHANQIGDMGAQAIGSALRNKANLSVLLMGSNKIGDAGAC 403

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           AIA  L+ ++ +T   +  N IG  GA A+   L+    +  L L   QI AS  +
Sbjct: 404 AIAEGLQTSTALTDFKMHVNQIGDTGALAIESSLRNKPLLAILHLSRNQISASAVQ 459


>gi|54294508|ref|YP_126923.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
 gi|53754340|emb|CAH15819.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
          Length = 464

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 156/421 (37%), Positives = 235/421 (55%), Gaps = 60/421 (14%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+++   N GDEG    A++L  NQ+   ++  AN I   G KA    L +N +L TL
Sbjct: 46  IKSLNLRNNNIGDEG----AKALAANQSLSTLNLRANNIGDEGAKA----LAANQSLSTL 97

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLS N IG EG K L      N  +  L L + ++ DEGAKA+A     N  L  L L  
Sbjct: 98  NLSYNNIGAEGAKALA----ANQSLSTLNLRANNIGDEGAKALAA----NQSLSTLNLRY 149

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G    A+AL  N ++ +L+L  N  G  GA ALA     N+SL  L+L  N+I 
Sbjct: 150 NNIGDEG----AKALAANQSLSTLNLRNNNIGDEGAKALA----ANQSLSTLNLSYNNIR 201

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            EG +AL +  S     L+ L++  N+I A+GA  +A      +SL  +NL  N+IGDEG
Sbjct: 202 AEGAKALAANQS-----LSTLNLRYNNIRAEGAKALAA----NQSLSTLNLSYNNIGDEG 252

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+    AL  N++++T++L  NNI  +GA A+A     N  +++L+L+YN IG +GAKAL
Sbjct: 253 AK----ALAANQSLSTLNLSYNNIGDEGAKALAA----NQSLSTLNLSYNNIGDEGAKAL 304

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
           +     + +++TL L +  I A GA+ +A     N ++S L+L  N + DEGAK LA   
Sbjct: 305 AA----NQSLSTLNLSYNNIRAEGAKALA----ANQSLSTLNLSYNNIGDEGAKALA--- 353

Query: 524 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
              N++L++++L++N IR +G    A+AL AN+  ++++LNL+ N +   G  AL +   
Sbjct: 354 --ANQSLSTLNLSYNNIRAEG----AKALAANQ--SLSTLNLSYNNIGDEGAKALNETDP 405

Query: 584 L 584
           L
Sbjct: 406 L 406



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 146/393 (37%), Positives = 218/393 (55%), Gaps = 56/393 (14%)

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L  N   + ++   N I   G KA    L +N +L TLNL  N IGDEG K L      N
Sbjct: 40  LNTNPEIKSLNLRNNNIGDEGAKA----LAANQSLSTLNLRANNIGDEGAKALA----AN 91

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             +  L LS  ++  EGAKA+A     N  L  L L  N I   G    A+AL  N ++ 
Sbjct: 92  QSLSTLNLSYNNIGAEGAKALAA----NQSLSTLNLRANNIGDEG----AKALAANQSLS 143

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           +L+L  N  G  GA ALA     N+SL  L+L  N+IGDEG +AL +  S     L+ L+
Sbjct: 144 TLNLRYNNIGDEGAKALA----ANQSLSTLNLRNNNIGDEGAKALAANQS-----LSTLN 194

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N+I A+GA  +A      +SL  +NL  N+I  EGA+    AL  N++++T++L  N
Sbjct: 195 LSYNNIRAEGAKALAA----NQSLSTLNLRYNNIRAEGAK----ALAANQSLSTLNLSYN 246

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           NI  +GA A+A     N  +++L+L+YN IG +GAKAL+     + +++TL L +  IG 
Sbjct: 247 NIGDEGAKALAA----NQSLSTLNLSYNNIGDEGAKALAA----NQSLSTLNLSYNNIGD 298

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA+ +A     N ++S L+L  N +R EGAK LA      N++L++++L++N I D+G 
Sbjct: 299 EGAKALA----ANQSLSTLNLSYNNIRAEGAKALA-----ANQSLSTLNLSYNNIGDEG- 348

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
              A+AL AN+  ++++LNL+ N +   G  AL
Sbjct: 349 ---AKALAANQ--SLSTLNLSYNNIRAEGAKAL 376



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 145/245 (59%), Gaps = 31/245 (12%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL+L    +  + I+ L+    +   ++  L++ NN+I  +GA  +A      +SL  +N
Sbjct: 19  ELNLSNQKLNAQDIKELIVPFLNTNPEIKSLNLRNNNIGDEGAKALAA----NQSLSTLN 74

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N+IGDEGA+    AL  N++++T++L  NNI ++GA A+A     N  +++L+L  N
Sbjct: 75  LRANNIGDEGAK----ALAANQSLSTLNLSYNNIGAEGAKALAA----NQSLSTLNLRAN 126

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG +GAKAL+     + +++TL L +  IG  GA+ +A     N ++S L+LR N + D
Sbjct: 127 NIGDEGAKALAA----NQSLSTLNLRYNNIGDEGAKALA----ANQSLSTLNLRNNNIGD 178

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
           EGAK LA      N++L++++L++N IR +G    A+AL AN+  ++++LNL  N +   
Sbjct: 179 EGAKALA-----ANQSLSTLNLSYNNIRAEG----AKALAANQ--SLSTLNLRYNNIRAE 227

Query: 574 GQSAL 578
           G  AL
Sbjct: 228 GAKAL 232



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/283 (36%), Positives = 145/283 (51%), Gaps = 54/283 (19%)

Query: 156 EFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L   ++ S++++   N GDEG    A++L  NQ+   ++ + N I A G KA   
Sbjct: 155 EGAKALAANQSLSTLNLRNNNIGDEG----AKALAANQSLSTLNLSYNNIRAEGAKALAA 210

Query: 213 --------------------VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
                                L +N +L TLNLS N IGDEG K L      N  +  L 
Sbjct: 211 NQSLSTLNLRYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKALAA----NQSLSTLN 266

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           LS  ++ DEGAKA+A     N  L  L L+ N I   G    A+AL  N ++ +L+L+ N
Sbjct: 267 LSYNNIGDEGAKALAA----NQSLSTLNLSYNNIGDEG----AKALAANQSLSTLNLSYN 318

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
              A GA ALA     N+SL  L+L  N+IGDEG +AL +  S     L+ L++  N+I 
Sbjct: 319 NIRAEGAKALA----ANQSLSTLNLSYNNIGDEGAKALAANQS-----LSTLNLSYNNIR 369

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI--ADALKQ 413
           A+GA  +A      +SL  +NL  N+IGDEGA+ +   D LK+
Sbjct: 370 AEGAKALAA----NQSLSTLNLSYNNIGDEGAKALNETDPLKR 408


>gi|320170062|gb|EFW46961.1| tyrosine-protein kinase transforming protein Abl [Capsaspora
           owczarzaki ATCC 30864]
          Length = 741

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 120/330 (36%), Positives = 177/330 (53%), Gaps = 4/330 (1%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L +  + D  A+AI E L+ N  L  L+L  N I  +G  ++A AL  N ++  L L  N
Sbjct: 33  LENQQIGDAEAQAIGEALQVNLALTELKLRVNQIGDAGARAIAGALGANRSLILLDLFRN 92

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G+ GA A+ + L+ N +L + +L  N +GD G R +   L     KLA + +  N I 
Sbjct: 93  QIGSAGAQAIGEALKTNNTLTKFYLSDNRLGDAGAREISEALKVNT-KLAGIYLNENRIG 151

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             G   + E ++  K+L  + L  N IGD GA  I D L+ NRT+T++ L  N I   GA
Sbjct: 152 DAGVQAIGEALRVNKTLTKLVLSHNQIGDAGARAIGDVLQVNRTLTSLVLWTNQIGPAGA 211

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            AI R L  N+ +T L L+ N +G  GA+AL E +K +  +  L L   QIG +GA+ +A
Sbjct: 212 QAIGRTLATNTTLTQLHLSKNQLGDAGAQALGEAMKVNRTLTQLDLHTNQIGDTGAQTIA 271

Query: 493 DMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
           D L+ N+T+  + L  N + D GA  + ++   VN  L  + L  N++ D GA AI  AL
Sbjct: 272 DALKVNSTLVEIFLDTNHIGDAGACAIGEALN-VNRTLAELSLKENQVGDAGARAIGDAL 330

Query: 553 KANEDVAVTSLNLANNFLTKFGQSALTDAK 582
           + N+   +T LNL  NF++  G SAL   K
Sbjct: 331 QVNK--TLTKLNLQRNFISSHGLSALKQTK 358



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 164/323 (50%), Gaps = 1/323 (0%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I  A  +A    LQ N+AL  L L  N IGD G + +   L  N  +  L L    +   
Sbjct: 38  IGDAEAQAIGEALQVNLALTELKLRVNQIGDAGARAIAGALGANRSLILLDLFRNQIGSA 97

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+AI E LK N+ L    L++N +  +G   ++EAL  N+ +  ++LN N  G  G  A
Sbjct: 98  GAQAIGEALKTNNTLTKFYLSDNRLGDAGAREISEALKVNTKLAGIYLNENRIGDAGVQA 157

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           + + L  NK+L +L L  N IGD G RA+   L   +  L  L +  N I   GA  +  
Sbjct: 158 IGEALRVNKTLTKLVLSHNQIGDAGARAIGDVLQVNR-TLTSLVLWTNQIGPAGAQAIGR 216

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +    +L  ++L  N +GD GA+ + +A+K NRT+T +DL  N I   GA  IA  LK 
Sbjct: 217 TLATNTTLTQLHLSKNQLGDAGAQALGEAMKVNRTLTQLDLHTNQIGDTGAQTIADALKV 276

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           NS +  + L  N IG  GA A+ E L  +  +  L L   Q+G +GA  + D L+ N T+
Sbjct: 277 NSTLVEIFLDTNHIGDAGACAIGEALNVNRTLAELSLKENQVGDAGARAIGDALQVNKTL 336

Query: 502 SILDLRANGLRDEGAKCLAQSFK 524
           + L+L+ N +   G   L Q+ K
Sbjct: 337 TKLNLQRNFISSHGLSALKQTKK 359



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 166/329 (50%), Gaps = 1/329 (0%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           SK+  N + +  +A  +  +  +  GD     + E+L  N    E+    N I  AG +A
Sbjct: 14  SKKQRNVYDQARKARGAYSLENQQIGDAEAQAIGEALQVNLALTELKLRVNQIGDAGARA 73

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
             G L +N +L  L+L  N IG  G + + + L  N  + +  LS   L D GA+ I+E 
Sbjct: 74  IAGALGANRSLILLDLFRNQIGSAGAQAIGEALKTNNTLTKFYLSDNRLGDAGAREISEA 133

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           LK N+ L  + LN N I  +G  ++ EAL  N T+  L L+ N  G  GA A+   L+ N
Sbjct: 134 LKVNTKLAGIYLNENRIGDAGVQAIGEALRVNKTLTKLVLSHNQIGDAGARAIGDVLQVN 193

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           ++L  L L  N IG  G +A+   L++    L  L +  N +   GA  + E +K  ++L
Sbjct: 194 RTLTSLVLWTNQIGPAGAQAIGRTLATNT-TLTQLHLSKNQLGDAGAQALGEAMKVNRTL 252

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             ++L+ N IGD GA+ IADALK N T+  I L  N+I   GA AI   L  N  +  L 
Sbjct: 253 TQLDLHTNQIGDTGAQTIADALKVNSTLVEIFLDTNHIGDAGACAIGEALNVNRTLAELS 312

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKL 478
           L  N +G  GA+A+ + L+ +  +  L L
Sbjct: 313 LKENQVGDAGARAIGDALQVNKTLTKLNL 341



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 148/297 (49%), Gaps = 4/297 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+   +D+     G  G   + E+L  N T  +   + N +  AG +     L+ N  L 
Sbjct: 82  RSLILLDLFRNQIGSAGAQAIGEALKTNNTLTKFYLSDNRLGDAGAREISEALKVNTKLA 141

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            + L+ N IGD GV+ + + L  N  + +L LS   + D GA+AI ++L+ N  L  L L
Sbjct: 142 GIYLNENRIGDAGVQAIGEALRVNKTLTKLVLSHNQIGDAGARAIGDVLQVNRTLTSLVL 201

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I  +G  ++   L  N+T+  LHL+ N  G  GA AL + ++ N++L +L LH N 
Sbjct: 202 WTNQIGPAGAQAIGRTLATNTTLTQLHLSKNQLGDAGAQALGEAMKVNRTLTQLDLHTNQ 261

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD G + +   L      L  + +  N I   GA  + E +   ++L  ++L  N +GD
Sbjct: 262 IGDTGAQTIADALKV-NSTLVEIFLDTNHIGDAGACAIGEALNVNRTLAELSLKENQVGD 320

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            GA  I DAL+ N+T+T ++L  N I S G SA+ +  K       L+LA     AD
Sbjct: 321 AGARAIGDALQVNKTLTKLNLQRNFISSHGLSALKQTKKST---CQLELADQRTAAD 374



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 100/199 (50%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  +  +  + + +S    GD G   + + L  N+T   +    N I  AG +A  
Sbjct: 156 QAIGEALRVNKTLTKLVLSHNQIGDAGARAIGDVLQVNRTLTSLVLWTNQIGPAGAQAIG 215

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L +N  L  L+LS N +GD G + L + +  N  + +L L +  + D GA+ IA+ LK
Sbjct: 216 RTLATNTTLTQLHLSKNQLGDAGAQALGEAMKVNRTLTQLDLHTNQIGDTGAQTIADALK 275

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS L  + L+ N I  +G  ++ EAL  N T+  L L  N  G  GA A+   L+ NK+
Sbjct: 276 VNSTLVEIFLDTNHIGDAGACAIGEALNVNRTLAELSLKENQVGDAGARAIGDALQVNKT 335

Query: 332 LRELHLHGNSIGDEGIRAL 350
           L +L+L  N I   G+ AL
Sbjct: 336 LTKLNLQRNFISSHGLSAL 354


>gi|320170789|gb|EFW47688.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 585

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 139/399 (34%), Positives = 209/399 (52%), Gaps = 10/399 (2%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           + K  +A +S +    N  D G   +AE L  N   E++    N I  AG +A    L+ 
Sbjct: 9   YDKVKKASTSFEQQCENIDDAGAQAIAEGLKGNPNVEKLFLWGNQIGDAGARAIAETLKL 68

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           +  L+ L+L  N IG++G + + D L  N  + +L L+   + D GA+AIAE LK N+ +
Sbjct: 69  DADLRKLDLYDNQIGEDGARAIADALKLNTTLTKLNLNDNQIGDAGAQAIAETLKVNTTM 128

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L+ N I  +G  +L+ AL  N T+  + L  N  G  GA A+A+ L+ N +L +L 
Sbjct: 129 ERLCLSANQIGDAGAQALSAALKVNKTLIKIELWNNQIGDAGAQAIAETLKVNATLTQLT 188

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N +GD G   +   L   K  L  L +  N I   GA  VAE +K   SL    L++
Sbjct: 189 LDKNKLGDAGATTIAEMLQVNK-ILTSLGLDYNQIGDAGANAVAEALKVNTSLR--TLHL 245

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
             IG+ GA+ +A+ LK N T+T + +    I    A AIA  LK N+ +T L L    IG
Sbjct: 246 GKIGNAGAQTMAEVLKMN-TLTRLSMC--QIGDAEAQAIAEALKVNTTLTDLRLDLGYIG 302

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             GA A+++ LK   N+  L LG  +IG +GA+ +A+ ++ NN +  L L  N + D GA
Sbjct: 303 EAGANAIAKSLK---NLRYLHLGKNRIGDAGAQAIAEAVKVNNKLRFLVLDENEIGDAGA 359

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           + +A + K VN  ++ + L  N+I D GA AI +  K N
Sbjct: 360 QAIAGALK-VNSTMSWLYLEDNQIGDAGAQAINKVFKMN 397


>gi|320165432|gb|EFW42331.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 446

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/288 (38%), Positives = 164/288 (56%), Gaps = 4/288 (1%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++AEAL  N T+  L L     G +GA A+A+ L+ N++L+ELHLH N IGD G +A+  
Sbjct: 33  AIAEALKVNKTVTWLILWATQIGHVGAQAIAEALKVNRTLKELHLHTNQIGDAGAQAIAE 92

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  LD+G N I   GA  +AE +K   +L  ++L+ + IGD G + I +ALK
Sbjct: 93  ALEVNTA-LRRLDLGCNQIGKAGARAIAEALKANTTLTSLDLWESQIGDAGVQAIFEALK 151

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           +N T+T + L  + I   GA AIA  LK N  ++ L L    IG  GA A++E L+ +  
Sbjct: 152 ENATVTKLGLSDSQIGDAGAHAIAEALKVNKTLSCLKLCACQIGDAGAHAIAEALRVNKT 211

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           + TL L   QIG +GA  +A+ LR N T++ L L  N + D GA+ +A++ K+ N  +  
Sbjct: 212 VTTLYLHENQIGDAGARAIAEALRVNTTLTQLYLHMNQIGDVGAQAIAEALKL-NTMVNE 270

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           + L+ N+I D G  AIA+ALK N    VT L+L  N +   G  A  +
Sbjct: 271 LFLSGNQIGDIGVHAIAEALKVN--TTVTELDLRYNCIGNVGLQAFDE 316



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/346 (36%), Positives = 185/346 (53%), Gaps = 14/346 (4%)

Query: 221 KTLNLSGNPI------GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           K  N SGN I      GD+  K + + L  N  V  L L +  +   GA+AIAE LK N 
Sbjct: 11  KVKNASGNLILGDHQTGDDEAKAIAEALKVNKTVTWLILWATQIGHVGAQAIAEALKVNR 70

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L+ L L+ N I  +G  ++AEAL  N+ +R L L  N  G  GA A+A+ L+ N +L  
Sbjct: 71  TLKELHLHTNQIGDAGAQAIAEALEVNTALRRLDLGCNQIGKAGARAIAEALKANTTLTS 130

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  + IGD G++A+   L      +  L + ++ I   GA  +AE +K  K+L  + L
Sbjct: 131 LDLWESQIGDAGVQAIFEALK-ENATVTKLGLSDSQIGDAGAHAIAEALKVNKTLSCLKL 189

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
               IGD GA  IA+AL+ N+T+TT+ L  N I   GA AIA  L+ N+ +T L L  N 
Sbjct: 190 CACQIGDAGAHAIAEALRVNKTVTTLYLHENQIGDAGARAIAEALRVNTTLTQLYLHMNQ 249

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA+A++E LK +  +N L L   QIG  G   +A+ L+ N T++ LDLR N + + 
Sbjct: 250 IGDVGAQAIAEALKLNTMVNELFLSGNQIGDIGVHAIAEALKVNTTVTELDLRYNCIGNV 309

Query: 515 GAKCLAQSFKVVNEALTS--IDLAFNEIRDDGAFAIAQALKANEDV 558
           G +   +  + VN  L++  ID   N +    AF++   L   ED+
Sbjct: 310 GLQAFDEMCQ-VNRTLSNFWIDGQINPL----AFSLLPRLATAEDL 350



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/295 (37%), Positives = 158/295 (53%), Gaps = 1/295 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GD+    +AE+L  N+T   +   A  I   G +A    L+ N  LK L+L  N IGD G
Sbjct: 27  GDDEAKAIAEALKVNKTVTWLILWATQIGHVGAQAIAEALKVNRTLKELHLHTNQIGDAG 86

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            + + + L  N  + RL L    +   GA+AIAE LK N+ L  L+L  + I  +G  ++
Sbjct: 87  AQAIAEALEVNTALRRLDLGCNQIGKAGARAIAEALKANTTLTSLDLWESQIGDAGVQAI 146

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
            EAL EN+T+  L L+ +  G  GA+A+A+ L+ NK+L  L L    IGD G  A+   L
Sbjct: 147 FEALKENATVTKLGLSDSQIGDAGAHAIAEALKVNKTLSCLKLCACQIGDAGAHAIAEAL 206

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
              K  +  L +  N I   GA  +AE ++   +L  + L+MN IGD GA+ IA+ALK N
Sbjct: 207 RVNK-TVTTLYLHENQIGDAGARAIAEALRVNTTLTQLYLHMNQIGDVGAQAIAEALKLN 265

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
             +  + L GN I   G  AIA  LK N+ +T LDL YN IG  G +A  E+ + 
Sbjct: 266 TMVNELFLSGNQIGDIGVHAIAEALKVNTTVTELDLRYNCIGNVGLQAFDEMCQV 320



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 147/307 (47%), Gaps = 31/307 (10%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  R    + +     GD G   +AE+L  N     +    N I  AG +A  
Sbjct: 60  QAIAEALKVNRTLKELHLHTNQIGDAGAQAIAEALEVNTALRRLDLGCNQIGKAGARAIA 119

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L++N  L +L+L  + IGD GV+ + + L +NA V +L LS   + D GA AIAE LK
Sbjct: 120 EALKANTTLTSLDLWESQIGDAGVQAIFEALKENATVTKLGLSDSQIGDAGAHAIAEALK 179

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L    I  +G  ++AEAL  N T+ +L+L+ N  G  GA A+A+ L  N +
Sbjct: 180 VNKTLSCLKLCACQIGDAGAHAIAEALRVNKTVTTLYLHENQIGDAGARAIAEALRVNTT 239

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L +L+LH N IGD G +A+   L         L+   N +   G                
Sbjct: 240 LTQLYLHMNQIGDVGAQAIAEALK--------LNTMVNELFLSG---------------- 275

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS--LD 449
                N IGD G   IA+ALK N T+T +DL  N I + G  A   + + N  +++  +D
Sbjct: 276 -----NQIGDIGVHAIAEALKVNTTVTELDLRYNCIGNVGLQAFDEMCQVNRTLSNFWID 330

Query: 450 LAYNPIG 456
              NP+ 
Sbjct: 331 GQINPLA 337


>gi|320166401|gb|EFW43300.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 575

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 217/438 (49%), Gaps = 32/438 (7%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M+    GD G   +AE L  +    +     N I  AG +A    L++   L  LNL  N
Sbjct: 80  MTSNMIGDAGARAIAEGLQASPELADFRMDTNQIGDAGAQAIGVALRNKANLSILNLDEN 139

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + + L  +  +  L++SS  + D GA+AI   L N + L +L+L+ N I  
Sbjct: 140 KIGDAGARAIAEGLQTSTALTELRMSSNQIGDAGAQAIGAALGNKANLSMLDLHENKIGD 199

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++AE L  ++ +  L ++ N  G  GA A+   L+   +L  L+L  N IGD G R
Sbjct: 200 AGARAIAEGLRTSTALAKLGMHANQIGDAGAQAIGSALQNKANLSMLYLSSNKIGDAGAR 259

Query: 349 ALMSGLSS---------------------------RKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  GL +                            K  L+VL +  N I   GA  +AE
Sbjct: 260 SIAEGLQTSIELIDLRMDTNQIGDTGAQAIGSALRNKPDLSVLYLDENKIGDAGARAIAE 319

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            ++    L  + +  N IGD GA+ I  AL+    ++ + L  NNI   GASA+A  L+ 
Sbjct: 320 GLQTSAELTDLRMQTNQIGDAGAQAIGLALRNKANLSMLYLEENNIGDAGASAVAEGLQT 379

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           ++ +T L +  N  G  GAKA+   L+   N++ L L   +IG SGA  +A+ L+ +  +
Sbjct: 380 STALTELRMHTNQFGDTGAKAIGSALRNKPNLSVLGLNSNKIGDSGARAIAEGLKTSTAL 439

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEA-LTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           ++LD+  N + D GA+ +  + +  N+A L  + L+ N+I D GA AIA+ ++ +    +
Sbjct: 440 AVLDMFNNQIGDAGAQAIGSALR--NKAGLAMLYLSSNQIGDSGARAIAEGIQGS--AVL 495

Query: 561 TSLNLANNFLTKFGQSAL 578
           T+L + +N +   G  A+
Sbjct: 496 TALRMHDNQIGDAGAQAI 513



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 135/437 (30%), Positives = 220/437 (50%), Gaps = 4/437 (0%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E    + +  KE      +D+     GD G   +  +L        +   +N I  
Sbjct: 28  KITDEDALVIAKGLKENSKLQLLDLEDNEIGDAGARAIGLALRTKSNLCNLYMTSNMIGD 87

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG +A    LQ++  L    +  N IGD G + +   L + A +  L L    + D GA+
Sbjct: 88  AGARAIAEGLQASPELADFRMDTNQIGDAGAQAIGVALRNKANLSILNLDENKIGDAGAR 147

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE L+ ++ L  L +++N I  +G  ++  AL   + +  L L+ N  G  GA A+A+
Sbjct: 148 AIAEGLQTSTALTELRMSSNQIGDAGAQAIGAALGNKANLSMLDLHENKIGDAGARAIAE 207

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           GL  + +L +L +H N IGD G +A+ S L + K  L++L + +N I   GA  +AE ++
Sbjct: 208 GLRTSTALAKLGMHANQIGDAGAQAIGSALQN-KANLSMLYLSSNKIGDAGARSIAEGLQ 266

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
               L+ + +  N IGD GA+ I  AL+    ++ + L  N I   GA AIA  L+ ++ 
Sbjct: 267 TSIELIDLRMDTNQIGDTGAQAIGSALRNKPDLSVLYLDENKIGDAGARAIAEGLQTSAE 326

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +T L +  N IG  GA+A+   L+   N++ L L    IG +GA  VA+ L+ +  ++ L
Sbjct: 327 LTDLRMQTNQIGDAGAQAIGLALRNKANLSMLYLEENNIGDAGASAVAEGLQTSTALTEL 386

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            +  N   D GAK +  + +     L+ + L  N+I D GA AIA+ LK +  +AV  L+
Sbjct: 387 RMHTNQFGDTGAKAIGSALR-NKPNLSVLGLNSNKIGDSGARAIAEGLKTSTALAV--LD 443

Query: 565 LANNFLTKFGQSALTDA 581
           + NN +   G  A+  A
Sbjct: 444 MFNNQIGDAGAQAIGSA 460



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 198/380 (52%), Gaps = 6/380 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A + + MS    GD G   +  +LG       +    N I  AG +A    L+++ AL  
Sbjct: 158 ALTELRMSSNQIGDAGAQAIGAALGNKANLSMLDLHENKIGDAGARAIAEGLRTSTALAK 217

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L +  N IGD G + +   L + A +  L LSS  + D GA++IAE L+ +  L  L ++
Sbjct: 218 LGMHANQIGDAGAQAIGSALQNKANLSMLYLSSNKIGDAGARSIAEGLQTSIELIDLRMD 277

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  ++  AL     +  L+L+ N  G  GA A+A+GL+ +  L +L +  N I
Sbjct: 278 TNQIGDTGAQAIGSALRNKPDLSVLYLDENKIGDAGARAIAEGLQTSAELTDLRMQTNQI 337

Query: 343 GDEGIRALMSGLSSR-KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           GD G +A+  GL+ R K  L++L +  N+I   GA  VAE ++   +L  + ++ N  GD
Sbjct: 338 GDAGAQAI--GLALRNKANLSMLYLEENNIGDAGASAVAEGLQTSTALTELRMHTNQFGD 395

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA+ I  AL+    ++ + L  N I   GA AIA  LK ++ +  LD+  N IG  GA+
Sbjct: 396 TGAKAIGSALRNKPNLSVLGLNSNKIGDSGARAIAEGLKTSTALAVLDMFNNQIGDAGAQ 455

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           A+   L+    +  L L   QIG SGA  +A+ ++ +  ++ L +  N + D GA+ +  
Sbjct: 456 AIGSALRNKAGLAMLYLSSNQIGDSGARAIAEGIQGSAVLTALRMHDNQIGDAGAQAIG- 514

Query: 522 SFKVVNEA-LTSIDLAFNEI 540
            F + N+A L+ + L+ N+I
Sbjct: 515 -FALWNKAELSKLSLSQNQI 533



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 198/389 (50%), Gaps = 2/389 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S +++     GD G   +AE L  +    E+  ++N I  AG +A    L +   L  L
Sbjct: 131 LSILNLDENKIGDAGARAIAEGLQTSTALTELRMSSNQIGDAGAQAIGAALGNKANLSML 190

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N IGD G + + + L  +  + +L + +  + D GA+AI   L+N + L +L L++
Sbjct: 191 DLHENKIGDAGARAIAEGLRTSTALAKLGMHANQIGDAGAQAIGSALQNKANLSMLYLSS 250

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  S+AE L  +  +  L ++ N  G  GA A+   L     L  L+L  N IG
Sbjct: 251 NKIGDAGARSIAEGLQTSIELIDLRMDTNQIGDTGAQAIGSALRNKPDLSVLYLDENKIG 310

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G RA+  GL +   +L  L +  N I   GA  +   ++N  +L  + L  N+IGD G
Sbjct: 311 DAGARAIAEGLQT-SAELTDLRMQTNQIGDAGAQAIGLALRNKANLSMLYLEENNIGDAG 369

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A  +A+ L+ +  +T + +  N     GA AI   L++   ++ L L  N IG  GA+A+
Sbjct: 370 ASAVAEGLQTSTALTELRMHTNQFGDTGAKAIGSALRNKPNLSVLGLNSNKIGDSGARAI 429

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
           +E LK    +  L +   QIG +GA+ +   LR    +++L L +N + D GA+ +A+  
Sbjct: 430 AEGLKTSTALAVLDMFNNQIGDAGAQAIGSALRNKAGLAMLYLSSNQIGDSGARAIAEGI 489

Query: 524 KVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
           +  +  LT++ +  N+I D GA AI  AL
Sbjct: 490 Q-GSAVLTALRMHDNQIGDAGAQAIGFAL 517


>gi|444731780|gb|ELW72126.1| Protein NLRC3 [Tupaia chinensis]
          Length = 1100

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 145/433 (33%), Positives = 214/433 (49%), Gaps = 18/433 (4%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFD 211
             L     +L    S+ +    F D  +  L   L G +   +E+S A N I+  G KA  
Sbjct: 670  VLRSLLPQLLYCRSLRLDANQFQDAVMELLGSVLSGKDCRTQELSLAENQISNKGAKALA 729

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L  N +L +L+L  N IG  G K L D L  N  +  L L    ++D+GA+A+AE L 
Sbjct: 730  RSLLVNRSLTSLDLRANSIGPLGAKALADALRINRTLTALSLQGNGIKDDGARAMAEALA 789

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +N  L VL L  N I   G   +A+ L +N +++ L  + N     GA ALA+ L+ N+ 
Sbjct: 790  SNQTLSVLHLQKNTIGPMGAQWMADTLKQNRSLKELMFSSNGIADGGAAALAEALKVNQG 849

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI--GNNSISAKGAFHVAEYIKNCKSL 389
            L  L L  NSI  EG +AL   L +    L  L+   G     A    H +         
Sbjct: 850  LESLDLRENSISPEGAQALAGALRT-NSTLRSLEYVAGGKPDRASWQLHHS--------- 899

Query: 390  LW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             W   L  N + D+GA+ IA A+ +N T+ ++ L  N + +  A A+ + L+ N  +TSL
Sbjct: 900  -WGGGLTANLLHDQGAQAIAGAVGENHTLLSLHLQWNFLQASAAIALGQALQRNGNLTSL 958

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG +GA A++  LK +  +  L L    IGA+GA+ + + L  N T+ ILDLR 
Sbjct: 959  DLQENAIGDEGATAVASALKTNTALTALYLQVASIGAAGAQALGEALAVNRTLEILDLRG 1018

Query: 509  NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +   GAK LA + K VN +L  ++L  N +  DGA  IA AL  N    +  +NL  N
Sbjct: 1019 NAIGVAGAKALANALK-VNSSLRRLNLQENSLGLDGALCIATALSGNHR--LQHINLQGN 1075

Query: 569  FLTKFGQSALTDA 581
             + + G   +++A
Sbjct: 1076 NVAESGARMISEA 1088



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 183/383 (47%), Gaps = 34/383 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ +S+D+   + G  G   LA++L  N+T   +S   NGI   G +A    L SN  L 
Sbjct: 736  RSLTSLDLRANSIGPLGAKALADALRINRTLTALSLQGNGIKDDGARAMAEALASNQTLS 795

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             L+L  N IG  G + + D L  N  ++ L  SS  + D GA A+AE LK N  L  L+L
Sbjct: 796  VLHLQKNTIGPMGAQWMADTLKQNRSLKELMFSSNGIADGGAAALAEALKVNQGLESLDL 855

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSL-------------HLNGNYGGALGANALAKGLEG 328
              N I   G  +LA AL  NST+RSL              L+ ++GG L AN L      
Sbjct: 856  RENSISPEGAQALAGALRTNSTLRSLEYVAGGKPDRASWQLHHSWGGGLTANLLH----- 910

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
                           D+G +A+ +G       L  L +  N + A  A  + + ++   +
Sbjct: 911  ---------------DQGAQAI-AGAVGENHTLLSLHLQWNFLQASAAIALGQALQRNGN 954

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            L  ++L  N IGDEGA  +A ALK N  +T + L   +I + GA A+   L  N  +  L
Sbjct: 955  LTSLDLQENAIGDEGATAVASALKTNTALTALYLQVASIGAAGAQALGEALAVNRTLEIL 1014

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            DL  N IG  GAKAL+  LK + ++  L L    +G  GA  +A  L  N+ +  ++L+ 
Sbjct: 1015 DLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGLDGALCIATALSGNHRLQHINLQG 1074

Query: 509  NGLRDEGAKCLAQSFKVVNEALT 531
            N + + GA+ ++++       LT
Sbjct: 1075 NNVAESGARMISEAITANAPTLT 1097



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 135/291 (46%), Gaps = 24/291 (8%)

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N    LG   L   L      R L L  N   D  +  L S LS +  +   L +  N I
Sbjct: 661 NLSACLGQGVLRSLLPQLLYCRSLRLDANQFQDAVMELLGSVLSGKDCRTQELSLAENQI 720

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           S KGA  +A  +   +SL  ++L  N IG  GA+ +ADAL+ NRT+T + L GN I   G
Sbjct: 721 SNKGAKALARSLLVNRSLTSLDLRANSIGPLGAKALADALRINRTLTALSLQGNGIKDDG 780

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A A+A  L  N  ++ L L  N IG  GA+ +++ LK + ++  L      I   GA  +
Sbjct: 781 ARAMAEALASNQTLSVLHLQKNTIGPMGAQWMADTLKQNRSLKELMFSSNGIADGGAAAL 840

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID----------------- 534
           A+ L+ N  +  LDLR N +  EGA+ LA + +  N  L S++                 
Sbjct: 841 AEALKVNQGLESLDLRENSISPEGAQALAGALR-TNSTLRSLEYVAGGKPDRASWQLHHS 899

Query: 535 ----LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
               L  N + D GA AIA A+   E+  + SL+L  NFL      AL  A
Sbjct: 900 WGGGLTANLLHDQGAQAIAGAV--GENHTLLSLHLQWNFLQASAAIALGQA 948



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 94/188 (50%)

Query: 176  DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
            D+G   +A ++G N T   +    N + A+   A    LQ N  L +L+L  N IGDEG 
Sbjct: 911  DQGAQAIAGAVGENHTLLSLHLQWNFLQASAAIALGQALQRNGNLTSLDLQENAIGDEGA 970

Query: 236  KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
              +   L  N  +  L L    +   GA+A+ E L  N  L +L+L  N I  +G  +LA
Sbjct: 971  TAVASALKTNTALTALYLQVASIGAAGAQALGEALAVNRTLEILDLRGNAIGVAGAKALA 1030

Query: 296  EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
             AL  NS++R L+L  N  G  GA  +A  L GN  L+ ++L GN++ + G R +   ++
Sbjct: 1031 NALKVNSSLRRLNLQENSLGLDGALCIATALSGNHRLQHINLQGNNVAESGARMISEAIT 1090

Query: 356  SRKGKLAV 363
            +    L V
Sbjct: 1091 ANAPTLTV 1098



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 60/119 (50%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A +++ +   + G  G   L E+L  N+T E +    N I  AG KA    L+ N +L+ 
Sbjct: 982  ALTALYLQVASIGAAGAQALGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRR 1041

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N +G +G  C+   L  N  ++ + L   ++ + GA+ I+E +  N+    +E+
Sbjct: 1042 LNLQENSLGLDGALCIATALSGNHRLQHINLQGNNVAESGARMISEAITANAPTLTVEM 1100


>gi|66803749|ref|XP_635706.1| hypothetical protein DDB_G0290485 [Dictyostelium discoideum AX4]
 gi|60463940|gb|EAL62103.1| hypothetical protein DDB_G0290485 [Dictyostelium discoideum AX4]
          Length = 818

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 204/384 (53%), Gaps = 31/384 (8%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L  N  + TL LS N IG++   C+ + L+ N  +  L LS   + +EGA+ I++ +  
Sbjct: 375 LLTKNTTITTLELSQNGIGNKAAHCIGECLLANKTITHLNLSFNSIGNEGAEEISKAILV 434

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L+L+ N I   G  +L +AL   + +++++L+ N  GA G + + + +  N SL
Sbjct: 435 NTTLINLDLSQNCIGLKGSKALGQALQSTTILQTINLSKNRFGAKGIDFIVESIGKNSSL 494

Query: 333 RELHLHGNSIGD----------------------------EGIRALMSGLSSRKGKLAVL 364
            E+    N + +                            E ++ +  G+ + +  +A L
Sbjct: 495 TEVDFSKNDLNEKSSKYVGEAIRKHPCLASVNLCDTKLSPESMKYISEGIQASQ-TIAYL 553

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+  N  + KG   +A  +  C+S+ +++L  + IGD+GA ++ DAL QN +I  + L  
Sbjct: 554 DMSRNEFNYKGLKPLAAALSMCQSITYLDLTGDSIGDKGAVQLGDALAQNHSIINLSLAF 613

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNP-IGADGAKALSEVLKFHGNINTLKLGWCQI 483
           NNI + GA+++   LK N  +  LDL+ NP IG  GA  ++E L  +  I+ L +    +
Sbjct: 614 NNIGASGATSLGNALKTNRSLEILDLSINPEIGHLGAIHIAEGLAMNKKISKLSMCTNGL 673

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G  GA+ + + LR N+TI+ L LR N + DEG + L+ S K  N+++T ++L+ N I +D
Sbjct: 674 GPIGAKRLGEALRQNSTITDLQLRGNEIGDEGCRALSDSLK-QNQSITELNLSGNGITND 732

Query: 544 GAFAIAQALKANEDVAVTSLNLAN 567
           GA A+ +AL  N+ +A   LN  N
Sbjct: 733 GAKALCEALWYNQSLASIQLNHNN 756



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 180/363 (49%), Gaps = 30/363 (8%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +++S  + G+EG   +++++  N T   +  + N I   G KA    LQS   L+
Sbjct: 408 KTITHLNLSFNSIGNEGAEEISKAILVNTTLINLDLSQNCIGLKGSKALGQALQSTTILQ 467

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR---- 277
           T+NLS N  G +G+  + + +  N+ +  +  S  DL ++ +K + E ++ +  L     
Sbjct: 468 TINLSKNRFGAKGIDFIVESIGKNSSLTEVDFSKNDLNEKSSKYVGEAIRKHPCLASVNL 527

Query: 278 ------------------------VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
                                    L+++ N  +Y G   LA AL    +I  L L G+ 
Sbjct: 528 CDTKLSPESMKYISEGIQASQTIAYLDMSRNEFNYKGLKPLAAALSMCQSITYLDLTGDS 587

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG-NNSIS 372
            G  GA  L   L  N S+  L L  N+IG  G  +L + L + +  L +LD+  N  I 
Sbjct: 588 IGDKGAVQLGDALAQNHSIINLSLAFNNIGASGATSLGNALKTNRS-LEILDLSINPEIG 646

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             GA H+AE +   K +  +++  N +G  GA+++ +AL+QN TIT + L GN I  +G 
Sbjct: 647 HLGAIHIAEGLAMNKKISKLSMCTNGLGPIGAKRLGEALRQNSTITDLQLRGNEIGDEGC 706

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            A++  LK N  IT L+L+ N I  DGAKAL E L ++ ++ +++L    I   G +F+ 
Sbjct: 707 RALSDSLKQNQSITELNLSGNGITNDGAKALCEALWYNQSLASIQLNHNNINTQGVQFMK 766

Query: 493 DML 495
           ++L
Sbjct: 767 ELL 769



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 147/310 (47%), Gaps = 31/310 (10%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  +S + + E  ++    +SV++       E + +++E +  +QT   +  + N     
Sbjct: 504 LNEKSSKYVGEAIRKHPCLASVNLCDTKLSPESMKYISEGIQASQTIAYLDMSRNEFNYK 563

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G+K     L    ++  L+L+G+ IGD+G   L D L  N  +  L L+  ++   GA +
Sbjct: 564 GLKPLAAALSMCQSITYLDLTGDSIGDKGAVQLGDALAQNHSIINLSLAFNNIGASGATS 623

Query: 266 IAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           +   LK N  L +L+L+ N  I + G   +AE L  N  I  L +  N  G +GA  L +
Sbjct: 624 LGNALKTNRSLEILDLSINPEIGHLGAIHIAEGLAMNKKISKLSMCTNGLGPIGAKRLGE 683

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N ++ +L L GN IGDEG RAL                             ++ +K
Sbjct: 684 ALRQNSTITDLQLRGNEIGDEGCRAL-----------------------------SDSLK 714

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             +S+  +NL  N I ++GA+ + +AL  N+++ +I L  NNI+++G   +  +L   S 
Sbjct: 715 QNQSITELNLSGNGITNDGAKALCEALWYNQSLASIQLNHNNINTQGVQFMKELLL-RSY 773

Query: 445 ITSLDLAYNP 454
           + +LD  + P
Sbjct: 774 LVNLDSYFYP 783



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 108/193 (55%), Gaps = 5/193 (2%)

Query: 371 ISAKGAFHVAEYIK----NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
           +S    F V+ +++       ++  + L  N IG++ A  I + L  N+TIT ++L  N+
Sbjct: 360 VSTPTLFDVSSFVRMLLTKNTTITTLELSQNGIGNKAAHCIGECLLANKTITHLNLSFNS 419

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I ++GA  I++ +  N+ + +LDL+ N IG  G+KAL + L+    + T+ L   + GA 
Sbjct: 420 IGNEGAEEISKAILVNTTLINLDLSQNCIGLKGSKALGQALQSTTILQTINLSKNRFGAK 479

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
           G +F+ + +  N++++ +D   N L ++ +K + ++ +  +  L S++L   ++  +   
Sbjct: 480 GIDFIVESIGKNSSLTEVDFSKNDLNEKSSKYVGEAIR-KHPCLASVNLCDTKLSPESMK 538

Query: 547 AIAQALKANEDVA 559
            I++ ++A++ +A
Sbjct: 539 YISEGIQASQTIA 551


>gi|14993576|gb|AAK76360.1|AF272150_1 deliriumA [Dictyostelium discoideum]
          Length = 817

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 204/384 (53%), Gaps = 31/384 (8%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L  N  + TL LS N IG++   C+ + L+ N  +  L LS   + +EGA+ I++ +  
Sbjct: 375 LLTKNTTITTLELSQNGIGNKAAHCIGECLLANKTITHLNLSFNSIGNEGAEEISKAILV 434

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L+L+ N I   G  +L +AL   + +++++L+ N  GA G + + + +  N SL
Sbjct: 435 NTTLINLDLSQNCIGLKGSKALGQALQSTTILQTINLSKNRFGAKGIDFIVESIGKNSSL 494

Query: 333 RELHLHGNSIGD----------------------------EGIRALMSGLSSRKGKLAVL 364
            E+    N + +                            E ++ +  G+ + +  +A L
Sbjct: 495 TEVDFSKNDLNEKSSKYVGEAIRKHPCLASVNLCDTKLSPESMKYISEGIQASQ-TIAYL 553

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+  N  + KG   +A  +  C+S+ +++L  + IGD+GA ++ DAL QN +I  + L  
Sbjct: 554 DMSRNEFNYKGLKPLAAALSMCQSITYLDLTGDSIGDKGAVQLGDALAQNHSIINLSLAF 613

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNP-IGADGAKALSEVLKFHGNINTLKLGWCQI 483
           NNI + GA+++   LK N  +  LDL+ NP IG  GA  ++E L  +  I+ L +    +
Sbjct: 614 NNIGASGATSLGNALKTNRSLEILDLSINPEIGHLGAIHIAEGLAMNKKISKLSMCTNGL 673

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G  GA+ + + LR N+TI+ L LR N + DEG + L+ S K  N+++T ++L+ N I +D
Sbjct: 674 GPIGAKRLGEALRQNSTITDLQLRGNEIGDEGCRALSDSLK-QNQSITELNLSGNGITND 732

Query: 544 GAFAIAQALKANEDVAVTSLNLAN 567
           GA A+ +AL  N+ +A   LN  N
Sbjct: 733 GAKALCEALWYNQSLASIQLNHNN 756



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 180/363 (49%), Gaps = 30/363 (8%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +++S  + G+EG   +++++  N T   +  + N I   G KA    LQS   L+
Sbjct: 408 KTITHLNLSFNSIGNEGAEEISKAILVNTTLINLDLSQNCIGLKGSKALGQALQSTTILQ 467

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR---- 277
           T+NLS N  G +G+  + + +  N+ +  +  S  DL ++ +K + E ++ +  L     
Sbjct: 468 TINLSKNRFGAKGIDFIVESIGKNSSLTEVDFSKNDLNEKSSKYVGEAIRKHPCLASVNL 527

Query: 278 ------------------------VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
                                    L+++ N  +Y G   LA AL    +I  L L G+ 
Sbjct: 528 CDTKLSPESMKYISEGIQASQTIAYLDMSRNEFNYKGLKPLAAALSMCQSITYLDLTGDS 587

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG-NNSIS 372
            G  GA  L   L  N S+  L L  N+IG  G  +L + L + +  L +LD+  N  I 
Sbjct: 588 IGDKGAVQLGDALAQNHSIINLSLAFNNIGASGATSLGNALKTNRS-LEILDLSINPEIG 646

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             GA H+AE +   K +  +++  N +G  GA+++ +AL+QN TIT + L GN I  +G 
Sbjct: 647 HLGAIHIAEGLAMNKKISKLSMCTNGLGPIGAKRLGEALRQNSTITDLQLRGNEIGDEGC 706

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            A++  LK N  IT L+L+ N I  DGAKAL E L ++ ++ +++L    I   G +F+ 
Sbjct: 707 RALSDSLKQNQSITELNLSGNGITNDGAKALCEALWYNQSLASIQLNHNNINTQGVQFMK 766

Query: 493 DML 495
           ++L
Sbjct: 767 ELL 769



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 147/310 (47%), Gaps = 31/310 (10%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  +S + + E  ++    +SV++       E + +++E +  +QT   +  + N     
Sbjct: 504 LNEKSSKYVGEAIRKHPCLASVNLCDTKLSPESMKYISEGIQASQTIAYLDMSRNEFNYK 563

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G+K     L    ++  L+L+G+ IGD+G   L D L  N  +  L L+  ++   GA +
Sbjct: 564 GLKPLAAALSMCQSITYLDLTGDSIGDKGAVQLGDALAQNHSIINLSLAFNNIGASGATS 623

Query: 266 IAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           +   LK N  L +L+L+ N  I + G   +AE L  N  I  L +  N  G +GA  L +
Sbjct: 624 LGNALKTNRSLEILDLSINPEIGHLGAIHIAEGLAMNKKISKLSMCTNGLGPIGAKRLGE 683

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N ++ +L L GN IGDEG RAL                             ++ +K
Sbjct: 684 ALRQNSTITDLQLRGNEIGDEGCRAL-----------------------------SDSLK 714

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             +S+  +NL  N I ++GA+ + +AL  N+++ +I L  NNI+++G   +  +L   S 
Sbjct: 715 QNQSITELNLSGNGITNDGAKALCEALWYNQSLASIQLNHNNINTQGVQFMKELLL-RSY 773

Query: 445 ITSLDLAYNP 454
           + +LD  + P
Sbjct: 774 LVNLDSYFYP 783



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 108/193 (55%), Gaps = 5/193 (2%)

Query: 371 ISAKGAFHVAEYIK----NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
           +S    F V+ +++       ++  + L  N IG++ A  I + L  N+TIT ++L  N+
Sbjct: 360 VSTPTLFDVSSFVRMLLTKNTTITTLELSQNGIGNKAAHCIGECLLANKTITHLNLSFNS 419

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I ++GA  I++ +  N+ + +LDL+ N IG  G+KAL + L+    + T+ L   + GA 
Sbjct: 420 IGNEGAEEISKAILVNTTLINLDLSQNCIGLKGSKALGQALQSTTILQTINLSKNRFGAK 479

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
           G +F+ + +  N++++ +D   N L ++ +K + ++ +  +  L S++L   ++  +   
Sbjct: 480 GIDFIVESIGKNSSLTEVDFSKNDLNEKSSKYVGEAIR-KHPCLASVNLCDTKLSPESMK 538

Query: 547 AIAQALKANEDVA 559
            I++ ++A++ +A
Sbjct: 539 YISEGIQASQTIA 551


>gi|330844929|ref|XP_003294360.1| hypothetical protein DICPUDRAFT_96020 [Dictyostelium purpureum]
 gi|325075192|gb|EGC29113.1| hypothetical protein DICPUDRAFT_96020 [Dictyostelium purpureum]
          Length = 735

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 216/432 (50%), Gaps = 15/432 (3%)

Query: 136 TNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           TNL S F   ++      LN    ++   +  D+S          F+   +  N T   +
Sbjct: 259 TNLFSNFANNIYPN----LNSLQLKVSTPTLFDVSS---------FVRLLMTKNTTITTL 305

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
             + NGI           L  N  +  LNLS N IG+EG + +   L  N  +  L LS 
Sbjct: 306 ELSQNGIGNKAAHCIGECLNINSTITHLNLSFNSIGNEGAEEISKALQANQKLVNLDLSQ 365

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  +G+KA+   L+N   L  + L+ N     G   + E++ +N++I S+  + N   
Sbjct: 366 NCIGLKGSKALGTALQNTQFLTTINLSKNRFGAKGIDFIIESIGKNTSITSIDFSKNDLN 425

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
              +  L+  ++ +  L  L+L    +  + ++ L  G+SS +  ++ LD+  N    KG
Sbjct: 426 EKSSQHLSSSIKKHPCLSSLNLCDTKLSSDSMKILSEGISSSQ-TMSYLDLSRNEFGYKG 484

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
              +A  + +  S+ +++L  N IGD+GA  +ADAL+QN +I  + L  NNI   GA +I
Sbjct: 485 LKPLASALASSHSITYLDLTGNSIGDKGAILLADALQQNNSIRDLSLAFNNIGMTGAISI 544

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
              LK N  +  LDL+ N     G  +++E L ++  I  L +G   +G  GA+F+ D L
Sbjct: 545 GSALKVNQSLEILDLSLNAEIGQGFSSIAEGLCYNKKIKKLSMGTTGLGPQGAKFLGDAL 604

Query: 496 RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           RYN++I+ L LR N + DEG K ++++FK  N ++T ++L+ N I ++GA A+++++  N
Sbjct: 605 RYNSSITDLQLRGNEIGDEGCKAISEAFK-QNNSVTELNLSGNGITNEGAKALSESIFYN 663

Query: 556 EDVAVTSLNLAN 567
             +    LN  N
Sbjct: 664 SSLTYIQLNHNN 675



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 184/394 (46%), Gaps = 32/394 (8%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +++S  + G+EG   ++++L  NQ    +  + N I   G KA    LQ+   L T
Sbjct: 329 TITHLNLSFNSIGNEGAEEISKALQANQKLVNLDLSQNCIGLKGSKALGTALQNTQFLTT 388

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           +NLS N  G +G+  + + +  N  +  +  S  DL ++ ++ ++  +K +  L  L L 
Sbjct: 389 INLSKNRFGAKGIDFIIESIGKNTSITSIDFSKNDLNEKSSQHLSSSIKKHPCLSSLNLC 448

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +  +       L+E +  + T+  L L+ N  G  G   LA  L  + S+  L L GNSI
Sbjct: 449 DTKLSSDSMKILSEGISSSQTMSYLDLSRNEFGYKGLKPLASALASSHSITYLDLTGNSI 508

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN-DIGD 401
           GD+G   L   L  +   +  L +  N+I   GA  +   +K  +SL  ++L +N +IG 
Sbjct: 509 GDKGAILLADALQ-QNNSIRDLSLAFNNIGMTGAISIGSALKVNQSLEILDLSLNAEIG- 566

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +G   IA+ L  N+ I  + +G   +  +GA  +   L+ NS IT L L  N IG +G K
Sbjct: 567 QGFSSIAEGLCYNKKIKKLSMGTTGLGPQGAKFLGDALRYNSSITDLQLRGNEIGDEGCK 626

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           A+SE  K                             NN+++ L+L  NG+ +EGAK L++
Sbjct: 627 AISEAFK----------------------------QNNSVTELNLSGNGITNEGAKALSE 658

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           S    N +LT I L  N I   G   + + L  N
Sbjct: 659 SI-FYNSSLTYIQLNHNNINPQGVQLMRETLAIN 691



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 158/344 (45%), Gaps = 34/344 (9%)

Query: 125 AEGMNW---SVGAGTNLLS-GFT-GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGL 179
           A+G+++   S+G  T++ S  F+   L  +S Q L+   K+    SS+++       + +
Sbjct: 398 AKGIDFIIESIGKNTSITSIDFSKNDLNEKSSQHLSSSIKKHPCLSSLNLCDTKLSSDSM 457

Query: 180 FFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLC 239
             L+E +  +QT   +  + N     G+K     L S+ ++  L+L+GN IGD+G   L 
Sbjct: 458 KILSEGISSSQTMSYLDLSRNEFGYKGLKPLASALASSHSITYLDLTGNSIGDKGAILLA 517

Query: 240 DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
           D L  N  +  L L+  ++   GA +I   LK N  L +L+L+ N     GF+S+AE L 
Sbjct: 518 DALQQNNSIRDLSLAFNNIGMTGAISIGSALKVNQSLEILDLSLNAEIGQGFSSIAEGLC 577

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
            N  I+ L +     G  GA  L   L  N S+ +L L GN IGDEG +A          
Sbjct: 578 YNKKIKKLSMGTTGLGPQGAKFLGDALRYNSSITDLQLRGNEIGDEGCKA---------- 627

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
                              ++E  K   S+  +NL  N I +EGA+ +++++  N ++T 
Sbjct: 628 -------------------ISEAFKQNNSVTELNLSGNGITNEGAKALSESIFYNSSLTY 668

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           I L  NNI+ +G   +   L  N ++T     + P        L
Sbjct: 669 IQLNHNNINPQGVQLMRETLAINFIVTQDSYFFPPTSTTTVSGL 712


>gi|345309115|ref|XP_003428791.1| PREDICTED: protein NLRC3 [Ornithorhynchus anatinus]
          Length = 992

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/309 (36%), Positives = 162/309 (52%), Gaps = 30/309 (9%)

Query: 169 MSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           M    F D  +  LA  L G +   E++S A N I+  G KA    L  N +L TL+L G
Sbjct: 713 MDSNQFQDSVMELLASVLSGKDCLIEKLSLAENEISNKGAKALARSLMVNRSLTTLDLRG 772

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N IG +G K L D L  N  +  L L +  ++D+GAKA+A +L  N+ L VL L  N I 
Sbjct: 773 NSIGPQGAKALADALKINRVLMSLNLQNNKIKDDGAKALAHVLSTNNTLSVLHLQKNSIG 832

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
             G  +LA AL +N T++ L  +GN  G  G+ ALA+ L+ N+ L  L L  NSI + GI
Sbjct: 833 PIGAKTLASALKQNRTLKKLMFSGNGCGNEGSEALAEALKLNQGLITLDLQSNSISNAGI 892

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            AL   L S K                             +L+ +NL  N IG EGA +I
Sbjct: 893 LALTQALCSNK-----------------------------TLINLNLRENSIGSEGAREI 923

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           A AL+ NRT+  +DL  N +  +GA A+A  +K+N  +TSL L +N I +   KAL++ L
Sbjct: 924 ASALRANRTLKDLDLAANLLREEGAQALAVAVKENQTLTSLHLQWNFIQSSATKALAQAL 983

Query: 468 KFHGNINTL 476
           +F+ ++ +L
Sbjct: 984 QFNRSLTSL 992



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/288 (38%), Positives = 156/288 (54%), Gaps = 5/288 (1%)

Query: 277 RVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L +++N    S    LA  L  ++  I  L L  N     GA ALA+ L  N+SL  L
Sbjct: 709 RNLRMDSNQFQDSVMELLASVLSGKDCLIEKLSLAENEISNKGAKALARSLMVNRSLTTL 768

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GNSIG +G +AL   L   +  L  L++ NN I   GA  +A  +    +L  ++L 
Sbjct: 769 DLRGNSIGPQGAKALADALKINR-VLMSLNLQNNKIKDDGAKALAHVLSTNNTLSVLHLQ 827

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG  GA+ +A ALKQNRT+  +   GN   ++G+ A+A  LK N  + +LDL  N I
Sbjct: 828 KNSIGPIGAKTLASALKQNRTLKKLMFSGNGCGNEGSEALAEALKLNQGLITLDLQSNSI 887

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
              G  AL++ L  +  +  L L    IG+ GA  +A  LR N T+  LDL AN LR+EG
Sbjct: 888 SNAGILALTQALCSNKTLINLNLRENSIGSEGAREIASALRANRTLKDLDLAANLLREEG 947

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           A+ LA + K  N+ LTS+ L +N I+     A+AQAL+ N   ++TSL
Sbjct: 948 AQALAVAVK-ENQTLTSLHLQWNFIQSSATKALAQALQFNR--SLTSL 992



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/249 (35%), Positives = 131/249 (52%), Gaps = 3/249 (1%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L +  N   D  +  L S LS +   +  L +  N IS KGA  +A  +   +SL  +
Sbjct: 709 RNLRMDSNQFQDSVMELLASVLSGKDCLIEKLSLAENEISNKGAKALARSLMVNRSLTTL 768

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG +GA+ +ADALK NR + +++L  N I   GA A+A VL  N+ ++ L L  
Sbjct: 769 DLRGNSIGPQGAKALADALKINRVLMSLNLQNNKIKDDGAKALAHVLSTNNTLSVLHLQK 828

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GAK L+  LK +  +  L       G  G+E +A+ L+ N  +  LDL++N + 
Sbjct: 829 NSIGPIGAKTLASALKQNRTLKKLMFSGNGCGNEGSEALAEALKLNQGLITLDLQSNSIS 888

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           + G   L Q+    N+ L +++L  N I  +GA  IA AL+AN    +  L+LA N L +
Sbjct: 889 NAGILALTQAL-CSNKTLINLNLRENSIGSEGAREIASALRANR--TLKDLDLAANLLRE 945

Query: 573 FGQSALTDA 581
            G  AL  A
Sbjct: 946 EGAQALAVA 954



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 146/278 (52%), Gaps = 5/278 (1%)

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRE-LHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           R+L ++ N         LA  L G   L E L L  N I ++G +AL   L   +  L  
Sbjct: 709 RNLRMDSNQFQDSVMELLASVLSGKDCLIEKLSLAENEISNKGAKALARSLMVNRS-LTT 767

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  NSI  +GA  +A+ +K  + L+ +NL  N I D+GA+ +A  L  N T++ + L 
Sbjct: 768 LDLRGNSIGPQGAKALADALKINRVLMSLNLQNNKIKDDGAKALAHVLSTNNTLSVLHLQ 827

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N+I   GA  +A  LK N  +  L  + N  G +G++AL+E LK +  + TL L    I
Sbjct: 828 KNSIGPIGAKTLASALKQNRTLKKLMFSGNGCGNEGSEALAEALKLNQGLITLDLQSNSI 887

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             +G   +   L  N T+  L+LR N +  EGA+ +A + +  N  L  +DLA N +R++
Sbjct: 888 SNAGILALTQALCSNKTLINLNLRENSIGSEGAREIASALRA-NRTLKDLDLAANLLREE 946

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           GA A+A A+K N+   +TSL+L  NF+      AL  A
Sbjct: 947 GAQALAVAVKENQ--TLTSLHLQWNFIQSSATKALAQA 982



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 128/259 (49%), Gaps = 29/259 (11%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ +++D+ G + G +G   LA++L  N+    ++   N I   G KA   VL +N  L 
Sbjct: 763 RSLTTLDLRGNSIGPQGAKALADALKINRVLMSLNLQNNKIKDDGAKALAHVLSTNNTLS 822

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L  N IG  G K L   L  N  +++L  S     +EG++A+AE LK N  L  L+L
Sbjct: 823 VLHLQKNSIGPIGAKTLASALKQNRTLKKLMFSGNGCGNEGSEALAEALKLNQGLITLDL 882

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I  +G  +L +AL  N T+ +L+L  N  G+ GA  +A  L  N++L++L L  N 
Sbjct: 883 QSNSISNAGILALTQALCSNKTLINLNLRENSIGSEGAREIASALRANRTLKDLDLAANL 942

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + +EG +AL                             A  +K  ++L  ++L  N I  
Sbjct: 943 LREEGAQAL-----------------------------AVAVKENQTLTSLHLQWNFIQS 973

Query: 402 EGAEKIADALKQNRTITTI 420
              + +A AL+ NR++T++
Sbjct: 974 SATKALAQALQFNRSLTSL 992



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 81/156 (51%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +TL    K+ R    +  SG   G+EG   LAE+L  NQ    +   +N I+ AGI A  
Sbjct: 837 KTLASALKQNRTLKKLMFSGNGCGNEGSEALAEALKLNQGLITLDLQSNSISNAGILALT 896

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L SN  L  LNL  N IG EG + +   L  N  ++ L L++  LR+EGA+A+A  +K
Sbjct: 897 QALCSNKTLINLNLRENSIGSEGAREIASALRANRTLKDLDLAANLLREEGAQALAVAVK 956

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            N  L  L L  N I  S   +LA+AL  N ++ SL
Sbjct: 957 ENQTLTSLHLQWNFIQSSATKALAQALQFNRSLTSL 992


>gi|363739684|ref|XP_003642205.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3 [Gallus gallus]
          Length = 1097

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 141/368 (38%), Positives = 207/368 (56%), Gaps = 4/368 (1%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            L  N +L  L+L  N IG  G K L D L  N  +  L L    +++EGA A+AE L  N
Sbjct: 722  LMVNRSLTVLDLRSNSIGPSGAKALADALKKNQVLLFLSLQHNVIKEEGAAALAEALLTN 781

Query: 274  SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
              L  L L  N I   G   LAEAL +N +++ L L+ N  G  G+ ALA+ L+ N SL+
Sbjct: 782  RRLITLHLQKNSIGAHGARKLAEALAQNCSLKELMLSSNSVGDNGSVALAEALKVNHSLQ 841

Query: 334  ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
             L L  NSI + G+ AL + L S KG L  L++  NSIS +G   +A  ++   +L  ++
Sbjct: 842  SLDLQSNSISNTGVSALTAALCSNKG-LTDLNLRENSISKEGGPAIAHALRTNCTLRKLD 900

Query: 394  LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
            L  N + DEG + IA A+K+NR +T++ L  N I ++ A A+A+ L+ N  + SLDL  N
Sbjct: 901  LAANLLHDEGGKAIALAMKENRALTSLHLQWNFIQTQAAVALAQALQSNDSLASLDLQEN 960

Query: 454  PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
             IG +G  AL+  LK +  +  L L    I A+GA+ +A+ L  NN++ +LDLR N +  
Sbjct: 961  AIGDEGMAALAAALKVNTTLADLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNSISV 1020

Query: 514  EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
             GAK +A + K VN +L  ++L  N +  DGA  IA AL+ N    +T +NL  N + + 
Sbjct: 1021 AGAKAMANALK-VNRSLRWLNLQENSLGMDGAICIATALRGNH--GLTYVNLQGNRIGQS 1077

Query: 574  GQSALTDA 581
            G   ++DA
Sbjct: 1078 GAKMISDA 1085



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 188/363 (51%), Gaps = 1/363 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R+ + +D+   + G  G   LA++L  NQ    +S   N I   G  A    L +N  L 
Sbjct: 726  RSLTVLDLRSNSIGPSGAKALADALKKNQVLLFLSLQHNVIKEEGAAALAEALLTNRRLI 785

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TL+L  N IG  G + L + L  N  ++ L LSS  + D G+ A+AE LK N  L+ L+L
Sbjct: 786  TLHLQKNSIGAHGARKLAEALAQNCSLKELMLSSNSVGDNGSVALAEALKVNHSLQSLDL 845

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +N I  +G ++L  AL  N  +  L+L  N     G  A+A  L  N +LR+L L  N 
Sbjct: 846  QSNSISNTGVSALTAALCSNKGLTDLNLRENSISKEGGPAIAHALRTNCTLRKLDLAANL 905

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + DEG +A+   +   +  L  L +  N I  + A  +A+ +++  SL  ++L  N IGD
Sbjct: 906  LHDEGGKAIALAMKENRA-LTSLHLQWNFIQTQAAVALAQALQSNDSLASLDLQENAIGD 964

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            EG   +A ALK N T+  + L   +I + GA A+A  L  N+ +  LDL  N I   GAK
Sbjct: 965  EGMAALAAALKVNTTLADLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNSISVAGAK 1024

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            A++  LK + ++  L L    +G  GA  +A  LR N+ ++ ++L+ N +   GAK ++ 
Sbjct: 1025 AMANALKVNRSLRWLNLQENSLGMDGAICIATALRGNHGLTYVNLQGNRIGQSGAKMISD 1084

Query: 522  SFK 524
            + +
Sbjct: 1085 AIR 1087



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 151/309 (48%), Gaps = 27/309 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R   ++ +   + G  G   LAE+L  N + +E+  ++N +   G  A    L+ N +L+
Sbjct: 782  RRLITLHLQKNSIGAHGARKLAEALAQNCSLKELMLSSNSVGDNGSVALAEALKVNHSLQ 841

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            +L+L  N I + GV  L   L  N G+  L L    +  EG  AIA  L+ N  LR L+L
Sbjct: 842  SLDLQSNSISNTGVSALTAALCSNKGLTDLNLRENSISKEGGPAIAHALRTNCTLRKLDL 901

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              N++   G  ++A A+ EN  + SLHL  N+     A ALA+ L+ N SL  L L  N+
Sbjct: 902  AANLLHDEGGKAIALAMKENRALTSLHLQWNFIQTQAAVALAQALQSNDSLASLDLQENA 961

Query: 342  IGDEGIRALMSGLSSRK---------------------------GKLAVLDIGNNSISAK 374
            IGDEG+ AL + L                                 L VLD+  NSIS  
Sbjct: 962  IGDEGMAALAAALKVNTTLADLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNSISVA 1021

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            GA  +A  +K  +SL W+NL  N +G +GA  IA AL+ N  +T ++L GN I   GA  
Sbjct: 1022 GAKAMANALKVNRSLRWLNLQENSLGMDGAICIATALRGNHGLTYVNLQGNRIGQSGAKM 1081

Query: 435  IARVLKDNS 443
            I+  ++ NS
Sbjct: 1082 ISDAIRTNS 1090



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 172/377 (45%), Gaps = 63/377 (16%)

Query: 261 EGAKAIAELLKNNSILRVLELNN---------------------NMIDYSGFTSLAEALL 299
           E AKA+ E +KN S+  +L   N                     N + Y+   SL   LL
Sbjct: 604 EIAKAVEEAMKNESLAGMLTPVNCSALAYLLQVSDVCVEETNLSNCLTYNICKSLLPQLL 663

Query: 300 ENSTIRSLHLNGN---------YGGAL--------------------------GANALAK 324
                 SL L+ N          G  L                          G  ALA+
Sbjct: 664 ---FCHSLRLDNNQFKDNVMELLGSMLSVKDCQIQRLRXDLAQAECTLPEAEPGRGALAR 720

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N+SL  L L  NSIG  G +AL   L  +   L  L + +N I  +GA  +AE + 
Sbjct: 721 SLMVNRSLTVLDLRSNSIGPSGAKALADAL-KKNQVLLFLSLQHNVIKEEGAAALAEALL 779

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             + L+ ++L  N IG  GA K+A+AL QN ++  + L  N++   G+ A+A  LK N  
Sbjct: 780 TNRRLITLHLQKNSIGAHGARKLAEALAQNCSLKELMLSSNSVGDNGSVALAEALKVNHS 839

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           + SLDL  N I   G  AL+  L  +  +  L L    I   G   +A  LR N T+  L
Sbjct: 840 LQSLDLQSNSISNTGVSALTAALCSNKGLTDLNLRENSISKEGGPAIAHALRTNCTLRKL 899

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           DL AN L DEG K +A + K  N ALTS+ L +N I+   A A+AQAL++N+ +A  SL+
Sbjct: 900 DLAANLLHDEGGKAIALAMK-ENRALTSLHLQWNFIQTQAAVALAQALQSNDSLA--SLD 956

Query: 565 LANNFLTKFGQSALTDA 581
           L  N +   G +AL  A
Sbjct: 957 LQENAIGDEGMAALAAA 973


>gi|320170770|gb|EFW47669.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 453

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 206/406 (50%), Gaps = 4/406 (0%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  K+      +D+S    GD G   +  +L    T   ++ + N I  AG +A    LQ
Sbjct: 39  EGLKQNNHLQMLDLSDSQIGDAGAQAIGLALRNKPTLGFLNLSENKIGDAGARAIAEGLQ 98

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           ++  +  L +  N IGDEG + +   L   A +  L LS   + D G +AIAE L+ ++ 
Sbjct: 99  TSTTVTELWMRRNQIGDEGAQAIGSALQKKANLSILHLSENKIGDIGTRAIAEGLQTSTA 158

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L +  N I  +G  ++  AL     +  LHL+ N  G  GA A+A+GL+ +  L EL
Sbjct: 159 LTQLWMFTNQIGDAGAQAIGSALRNKPNLSILHLSWNKIGDAGARAIAEGLQTSTVLTEL 218

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            LH N IGD G +A+ S L + K  L+ L + NN I   GA  +AE  +   +L    + 
Sbjct: 219 GLHSNQIGDAGAQAIGSALQN-KANLSELYMNNNMIGGTGARAIAEGCQTSTALTDFRMQ 277

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IGD GA+ +  AL+    ++ + L  NNI   GA AIA  L   + +T   ++ N I
Sbjct: 278 ANLIGDAGAQALGPALQNKANLSILYLNSNNISDTGALAIAEGLHAKTALTDFRMSINQI 337

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G  GA+A+   L+   N++ L LG  +IG +GA  VA+ L+   T++   + AN + D G
Sbjct: 338 GDAGAQAIGSALRNMANLSILSLGENKIGDTGACAVAEGLQATATLTQFGMSANQVGDAG 397

Query: 516 AKCLAQSFKVVNEA-LTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           A+ +  + +  N+  L+ + L+ N+I       ++Q+L  N ++A 
Sbjct: 398 ARAIGSALR--NQTNLSKLHLSDNQISSSAVQLLSQSLPTNCELAA 441



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 170/334 (50%), Gaps = 2/334 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           I DE    + + L  N  ++ L LS   + D GA+AI   L+N   L  L L+ N I  +
Sbjct: 29  ITDEDALVIAEGLKQNNHLQMLDLSDSQIGDAGAQAIGLALRNKPTLGFLNLSENKIGDA 88

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++AE L  ++T+  L +  N  G  GA A+   L+   +L  LHL  N IGD G RA
Sbjct: 89  GARAIAEGLQTSTTVTELWMRRNQIGDEGAQAIGSALQKKANLSILHLSENKIGDIGTRA 148

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           +  GL +    L  L +  N I   GA  +   ++N  +L  ++L  N IGD GA  IA+
Sbjct: 149 IAEGLQTST-ALTQLWMFTNQIGDAGAQAIGSALRNKPNLSILHLSWNKIGDAGARAIAE 207

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L+ +  +T + L  N I   GA AI   L++ + ++ L +  N IG  GA+A++E  + 
Sbjct: 208 GLQTSTVLTELGLHSNQIGDAGAQAIGSALQNKANLSELYMNNNMIGGTGARAIAEGCQT 267

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
              +   ++    IG +GA+ +   L+    +SIL L +N + D GA  +A+       A
Sbjct: 268 STALTDFRMQANLIGDAGAQALGPALQNKANLSILYLNSNNISDTGALAIAEGLHA-KTA 326

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           LT   ++ N+I D GA AI  AL+   ++++ SL
Sbjct: 327 LTDFRMSINQIGDAGAQAIGSALRNMANLSILSL 360



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 31/322 (9%)

Query: 121 SKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLF 180
           ++  AEG+  S  A T L   FT ++     Q +    +     S + +S    GD G  
Sbjct: 146 TRAIAEGLQTST-ALTQLWM-FTNQIGDAGAQAIGSALRNKPNLSILHLSWNKIGDAGAR 203

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            +AE L  +    E+   +N I  AG +A    LQ+   L  L ++ N IG  G + + +
Sbjct: 204 AIAEGLQTSTVLTELGLHSNQIGDAGAQAIGSALQNKANLSELYMNNNMIGGTGARAIAE 263

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
               +  +   ++ +  + D GA+A+   L+N + L +L LN+N I  +G  ++AE L  
Sbjct: 264 GCQTSTALTDFRMQANLIGDAGAQALGPALQNKANLSILYLNSNNISDTGALAIAEGLHA 323

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
            + +    ++ N  G  GA A+   L    +L  L L  N IGD                
Sbjct: 324 KTALTDFRMSINQIGDAGAQAIGSALRNMANLSILSLGENKIGDT--------------- 368

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
                         GA  VAE ++   +L    +  N +GD GA  I  AL+    ++ +
Sbjct: 369 --------------GACAVAEGLQATATLTQFGMSANQVGDAGARAIGSALRNQTNLSKL 414

Query: 421 DLGGNNIHSKGASAIARVLKDN 442
            L  N I S     +++ L  N
Sbjct: 415 HLSDNQISSSAVQLLSQSLPTN 436



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 5/156 (3%)

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I  + A  IA  LK N+ +  LDL+ + IG  GA+A+   L+    +  L L   +IG +
Sbjct: 29  ITDEDALVIAEGLKQNNHLQMLDLSDSQIGDAGAQAIGLALRNKPTLGFLNLSENKIGDA 88

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGA 545
           GA  +A+ L+ + T++ L +R N + DEGA+ +  +  K  N  L+ + L+ N+I D G 
Sbjct: 89  GARAIAEGLQTSTTVTELWMRRNQIGDEGAQAIGSALQKKAN--LSILHLSENKIGDIGT 146

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            AIA+ L+ +   A+T L +  N +   G  A+  A
Sbjct: 147 RAIAEGLQTS--TALTQLWMFTNQIGDAGAQAIGSA 180


>gi|452822160|gb|EME29182.1| FBox-LRR protein [Galdieria sulphuraria]
          Length = 1076

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 135/428 (31%), Positives = 209/428 (48%), Gaps = 43/428 (10%)

Query: 120 PSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSV---DMSGRNFGD 176
           P+    E  ++S   GT L        F   K  L    K L+A S++   D+   N   
Sbjct: 386 PNNDFKEYWSFSKDFGTRLC-------FYPDKVKLEFACKALQANSTLEILDIDSCNMNS 438

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
           +    L+E+L  N T + +    N I + G +    VL+ N  L  L++ GN IG EG +
Sbjct: 439 DDAKKLSEALKRNSTLDNLCIGINKINSEGARYIADVLKMNSTLTKLSIYGNNIGSEGAR 498

Query: 237 CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
            L + L  N+ ++ L +   ++  EG K I+  L +NS L  L +  N ID  G   L+E
Sbjct: 499 YLSEALKVNSTLKMLCMGRNNIGSEGTKYISNALMHNSTLTELCIYGNNIDSQGAKYLSE 558

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           AL  NS +++  L  N  G+ GA  L+K LE N +L EL+++ N IG EG + L  G   
Sbjct: 559 ALKVNSGLKTFRLGRNSIGSEGAMVLSKALERNSTLTELYIYANKIGPEGAKHLF-GAME 617

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R  KL  L IG N+I   GA  ++E ++   SL  + LY N+IG +G + +++AL+ N  
Sbjct: 618 RHSKLTTLCIGINNIGPDGAKALSEALQRNSSLETLQLYANEIGSQGMKYLSEALEINSA 677

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +TT  +G N+I ++GA  ++  LK NS +                   +VL  +GN    
Sbjct: 678 LTTFLIGCNDIGNEGAGHLSEALKTNSTL-------------------KVLYIYGN---- 714

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
                 I A+GA +++DMLR N ++  + +  N +  EG   L +  K   E  T  +L 
Sbjct: 715 -----NIDATGARYLSDMLRRNLSLIKMHIYGNSIGSEGFNALVEGLK---ENYTMKELY 766

Query: 537 FNEIRDDG 544
            N I+DD 
Sbjct: 767 IN-IKDDS 773



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 215/427 (50%), Gaps = 28/427 (6%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
            T +L    +QT N   KE  +FS      ++FG    F+  +         ++ FA   
Sbjct: 374 ITSELCYHLQQTPNNDFKEYWSFS------KDFGTRLCFYPDKV--------KLEFACKA 419

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
                       LQ+N  L+ L++    +  +  K L + L  N+ ++ L +    +  E
Sbjct: 420 ------------LQANSTLEILDIDSCNMNSDDAKKLSEALKRNSTLDNLCIGINKINSE 467

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+ IA++LK NS L  L +  N I   G   L+EAL  NST++ L +  N  G+ G   
Sbjct: 468 GARYIADVLKMNSTLTKLSIYGNNIGSEGARYLSEALKVNSTLKMLCMGRNNIGSEGTKY 527

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  L  N +L EL ++GN+I  +G + L   L    G L    +G NSI ++GA  +++
Sbjct: 528 ISNALMHNSTLTELCIYGNNIDSQGAKYLSEALKVNSG-LKTFRLGRNSIGSEGAMVLSK 586

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            ++   +L  + +Y N IG EGA+ +  A++++  +TT+ +G NNI   GA A++  L+ 
Sbjct: 587 ALERNSTLTELYIYANKIGPEGAKHLFGAMERHSKLTTLCIGINNIGPDGAKALSEALQR 646

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           NS + +L L  N IG+ G K LSE L+ +  + T  +G   IG  GA  +++ L+ N+T+
Sbjct: 647 NSSLETLQLYANEIGSQGMKYLSEALEINSALTTFLIGCNDIGNEGAGHLSEALKTNSTL 706

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
            +L +  N +   GA+ L+   +  N +L  + +  N I  +G  A+ + LK N  +   
Sbjct: 707 KVLYIYGNNIDATGARYLSDMLR-RNLSLIKMHIYGNSIGSEGFNALVEGLKENYTMKEL 765

Query: 562 SLNLANN 568
            +N+ ++
Sbjct: 766 YINIKDD 772



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 147/262 (56%), Gaps = 4/262 (1%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+ N +L  L +   ++  +  + L   L  R   L  L IG N I+++GA ++A+ 
Sbjct: 417 CKALQANSTLEILDIDSCNMNSDDAKKLSEALK-RNSTLDNLCIGINKINSEGARYIADV 475

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K   +L  +++Y N+IG EGA  +++ALK N T+  + +G NNI S+G   I+  L  N
Sbjct: 476 LKMNSTLTKLSIYGNNIGSEGARYLSEALKVNSTLKMLCMGRNNIGSEGTKYISNALMHN 535

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T L +  N I + GAK LSE LK +  + T +LG   IG+ GA  ++  L  N+T++
Sbjct: 536 STLTELCIYGNNIDSQGAKYLSEALKVNSGLKTFRLGRNSIGSEGAMVLSKALERNSTLT 595

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L + AN +  EGAK L  + +  +  LT++ +  N I  DGA A+++AL+ N   ++ +
Sbjct: 596 ELYIYANKIGPEGAKHLFGAME-RHSKLTTLCIGINNIGPDGAKALSEALQRNS--SLET 652

Query: 563 LNLANNFLTKFGQSALTDAKDL 584
           L L  N +   G   L++A ++
Sbjct: 653 LQLYANEIGSQGMKYLSEALEI 674



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 119/222 (53%), Gaps = 4/222 (1%)

Query: 171 GRN-FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP 229
           GRN  G EG   L+++L  N T  E+   AN I   G K   G ++ +  L TL +  N 
Sbjct: 572 GRNSIGSEGAMVLSKALERNSTLTELYIYANKIGPEGAKHLFGAMERHSKLTTLCIGINN 631

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IG +G K L + L  N+ +E LQL + ++  +G K ++E L+ NS L    +  N I   
Sbjct: 632 IGPDGAKALSEALQRNSSLETLQLYANEIGSQGMKYLSEALEINSALTTFLIGCNDIGNE 691

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   L+EAL  NST++ L++ GN   A GA  L+  L  N SL ++H++GNSIG EG  A
Sbjct: 692 GAGHLSEALKTNSTLKVLYIYGNNIDATGARYLSDMLRRNLSLIKMHIYGNSIGSEGFNA 751

Query: 350 LMSGLSSRKG-KLAVLDIGNNSISAKGAFHVAEYIK--NCKS 388
           L+ GL      K   ++I ++SI ++    + E +   NC S
Sbjct: 752 LVEGLKENYTMKELYINIKDDSIGSRETSLIRELLHRNNCLS 793



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 119/246 (48%), Gaps = 26/246 (10%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G EG   L  ++  +     +    N I   G KA    LQ N +L+TL L  N IG +
Sbjct: 604 IGPEGAKHLFGAMERHSKLTTLCIGINNIGPDGAKALSEALQRNSSLETLQLYANEIGSQ 663

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G+K L + L  N+ +    +   D+ +EGA  ++E LK NS L+VL +  N ID +G   
Sbjct: 664 GMKYLSEALEINSALTTFLIGCNDIGNEGAGHLSEALKTNSTLKVLYIYGNNIDATGARY 723

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH--GNSIGDEG---IR 348
           L++ L  N ++  +H+ GN  G+ G NAL +GL+ N +++EL+++   +SIG      IR
Sbjct: 724 LSDMLRRNLSLIKMHIYGNSIGSEGFNALVEGLKENYTMKELYINIKDDSIGSRETSLIR 783

Query: 349 ALM---------------------SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            L+                       +  R+ KL +    ++  + K AF +  Y+++ +
Sbjct: 784 ELLHRNNCLSDEVDSPISFTQEEEQMIMERRKKLDLPTQQDHDAACKAAFLLISYLQHRR 843

Query: 388 SLLWIN 393
            L  I+
Sbjct: 844 KLCLID 849



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 8/119 (6%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A ++  +   + G+EG   L+E+L  N T + +    N I A G +    +L+ N++L  
Sbjct: 677 ALTTFLIGCNDIGNEGAGHLSEALKTNSTLKVLYIYGNNIDATGARYLSDMLRRNLSLIK 736

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG-----AKAIAELLKNNSIL 276
           +++ GN IG EG   L + L +N  ++ L    ++++D+         I ELL  N+ L
Sbjct: 737 MHIYGNSIGSEGFNALVEGLKENYTMKELY---INIKDDSIGSRETSLIRELLHRNNCL 792



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 3/93 (3%)

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           EF    L+ N+T+ ILD+ +  +  + AK L+++ K  N  L ++ +  N+I  +GA  I
Sbjct: 414 EFACKALQANSTLEILDIDSCNMNSDDAKKLSEALK-RNSTLDNLCIGINKINSEGARYI 472

Query: 549 AQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           A  LK N    +T L++  N +   G   L++A
Sbjct: 473 ADVLKMNS--TLTKLSIYGNNIGSEGARYLSEA 503


>gi|320163960|gb|EFW40859.1| NOD3 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 633

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/308 (37%), Positives = 172/308 (55%), Gaps = 13/308 (4%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           ER      ++ D GA+AIAE LK NS +  L L  N I  +G  ++AE L  N T+    
Sbjct: 17  ERFLQQCENIDDAGAQAIAEGLKGNSNITALSLGWNQIGDAGARAIAETLKRNMTVTE-- 74

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
                     A A+A+ L+ N+++ +L L  N IGD G +A+   L      +  LD+  
Sbjct: 75  ---------PARAIAETLKVNRTVTDLGLSANQIGDAGAQAIAETLKVNT-TVTNLDLWQ 124

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA  ++  +K  K+L+ I+L  N +GD GA+ IA+ALK N T+  + L  N + 
Sbjct: 125 NQIGDAGAQAISVALKVNKTLIKIDLNGNQVGDAGAQAIAEALKVNTTLANLGLHNNKLG 184

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA+AIA VLK N+ + +L LA N IG  GA+A++E LK +  +  L L   QIG +GA
Sbjct: 185 DAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALKVNKTLTCLFLKQNQIGNAGA 244

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           + +A+ L+ N  + +  LR N + + GA+ +A++ K VN  L  + L  N+I D GA A+
Sbjct: 245 QAIAEALKVNTGLIVPCLRENEIGNAGAQAIAEALK-VNSTLYGLFLGNNQIGDAGAQAL 303

Query: 549 AQALKANE 556
           A+A K N+
Sbjct: 304 AEAFKVNQ 311



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 117/315 (37%), Positives = 174/315 (55%), Gaps = 24/315 (7%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL---- 354
           ++N+  R L    N   A GA A+A+GL+GN ++  L L  N IGD G RA+   L    
Sbjct: 12  VKNANERFLQQCENIDDA-GAQAIAEGLKGNSNITALSLGWNQIGDAGARAIAETLKRNM 70

Query: 355 ----------SSRKGKLAVLDIG--NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
                      + K    V D+G   N I   GA  +AE +K   ++  ++L+ N IGD 
Sbjct: 71  TVTEPARAIAETLKVNRTVTDLGLSANQIGDAGAQAIAETLKVNTTVTNLDLWQNQIGDA 130

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ I+ ALK N+T+  IDL GN +   GA AIA  LK N+ + +L L  N +G  GA A
Sbjct: 131 GAQAISVALKVNKTLIKIDLNGNQVGDAGAQAIAEALKVNTTLANLGLHNNKLGDAGATA 190

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           ++EVLK +  +  L L   QIG +GA+ +A+ L+ N T++ L L+ N + + GA+ +A++
Sbjct: 191 IAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALKVNKTLTCLFLKQNQIGNAGAQAIAEA 250

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 582
            K VN  L    L  NEI + GA AIA+ALK N    +  L L NN +   G  AL +A 
Sbjct: 251 LK-VNTGLIVPCLRENEIGNAGAQAIAEALKVNS--TLYGLFLGNNQIGDAGAQALAEA- 306

Query: 583 DLVYEMSEKEVNIFF 597
              +++++K+V+IF 
Sbjct: 307 ---FKVNQKQVDIFL 318



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/298 (36%), Positives = 149/298 (50%), Gaps = 12/298 (4%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G   +AE L  N     +S   N I  AG +A    L+ N+ +            
Sbjct: 25  NIDDAGAQAIAEGLKGNSNITALSLGWNQIGDAGARAIAETLKRNMTVT----------- 73

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           E  + + + L  N  V  L LS+  + D GA+AIAE LK N+ +  L+L  N I  +G  
Sbjct: 74  EPARAIAETLKVNRTVTDLGLSANQIGDAGAQAIAETLKVNTTVTNLDLWQNQIGDAGAQ 133

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +++ AL  N T+  + LNGN  G  GA A+A+ L+ N +L  L LH N +GD G  A+  
Sbjct: 134 AISVALKVNKTLIKIDLNGNQVGDAGAQAIAEALKVNTTLANLGLHNNKLGDAGATAIAE 193

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  L +  N I   GA  +AE +K  K+L  + L  N IG+ GA+ IA+ALK
Sbjct: 194 VLKVNT-TLKALGLAKNQIGEAGAQAIAEALKVNKTLTCLFLKQNQIGNAGAQAIAEALK 252

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
            N  +    L  N I + GA AIA  LK NS +  L L  N IG  GA+AL+E  K +
Sbjct: 253 VNTGLIVPCLRENEIGNAGAQAIAEALKVNSTLYGLFLGNNQIGDAGAQALAEAFKVN 310



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 151/301 (50%), Gaps = 12/301 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++ +     GD G   +AE+L  N T  E +           +A    L+ N  +  L
Sbjct: 44  ITALSLGWNQIGDAGARAIAETLKRNMTVTEPA-----------RAIAETLKVNRTVTDL 92

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            LS N IGD G + + + L  N  V  L L    + D GA+AI+  LK N  L  ++LN 
Sbjct: 93  GLSANQIGDAGAQAIAETLKVNTTVTNLDLWQNQIGDAGAQAISVALKVNKTLIKIDLNG 152

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +  +G  ++AEAL  N+T+ +L L+ N  G  GA A+A+ L+ N +L+ L L  N IG
Sbjct: 153 NQVGDAGAQAIAEALKVNTTLANLGLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIG 212

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G +A+   L   K  L  L +  N I   GA  +AE +K    L+   L  N+IG+ G
Sbjct: 213 EAGAQAIAEALKVNK-TLTCLFLKQNQIGNAGAQAIAEALKVNTGLIVPCLRENEIGNAG 271

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+ IA+ALK N T+  + LG N I   GA A+A   K N     + L  N I    ++A+
Sbjct: 272 AQAIAEALKVNSTLYGLFLGNNQIGDAGAQALAEAFKVNQKQVDIFLERNCISNTCSEAI 331

Query: 464 S 464
           +
Sbjct: 332 N 332



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 138/287 (48%), Gaps = 29/287 (10%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + + E  K  R  + + +S    GD G   +AE+L  N T   +    N I  AG +
Sbjct: 74  EPARAIAETLKVNRTVTDLGLSANQIGDAGAQAIAETLKVNTTVTNLDLWQNQIGDAGAQ 133

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L+ N  L  ++L+GN +G                            D GA+AIAE
Sbjct: 134 AISVALKVNKTLIKIDLNGNQVG----------------------------DAGAQAIAE 165

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N+ L  L L+NN +  +G T++AE L  N+T+++L L  N  G  GA A+A+ L+ 
Sbjct: 166 ALKVNTTLANLGLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALKV 225

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           NK+L  L L  N IG+ G +A+   L    G L V  +  N I   GA  +AE +K   +
Sbjct: 226 NKTLTCLFLKQNQIGNAGAQAIAEALKVNTG-LIVPCLRENEIGNAGAQAIAEALKVNST 284

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           L  + L  N IGD GA+ +A+A K N+    I L  N I +  + AI
Sbjct: 285 LYGLFLGNNQIGDAGAQALAEAFKVNQKQVDIFLERNCISNTCSEAI 331


>gi|281203588|gb|EFA77785.1| leucine-rich repeat-containing protein [Polysphondylium pallidum
           PN500]
          Length = 602

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 180/361 (49%), Gaps = 2/361 (0%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A + +++     GD GL  L ++L YN +   +  +   +TA   +    +L  N  L+ 
Sbjct: 224 AITHINLFSNQIGDLGLLKLVQALHYNSSVTFLGLSYCNLTARSGEPLANLLAKNTTLRE 283

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L LS N +G  G       L  N  +  L LS  +L D+G K IA  L +N  L  L L 
Sbjct: 284 LILSYNALGSSGAVSFAAGLAKNKSLRSLSLSHNELGDDGTKEIALSLASNQSLSELNLR 343

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G   ++ +L  N +I  + L GN  G  GA  +   L  N SL+ ++L  N I
Sbjct: 344 CNSISSEGSNYISTSLQINKSIVEIDLWGNNIGDYGATKIGVALSLNHSLKSINLTRNCI 403

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
             +GI ++ S L S   K+  +D+  N++ A GA  +A+ I+   S+  + L  N     
Sbjct: 404 -QQGIGSIASALCSASSKITTIDLSANALGAIGAIEIAKIIRATTSIESMTLSSNKFESN 462

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           G + IA A+  N++I  ++L  N I  +GA  +A  +K NS I   DLA N +G +G KA
Sbjct: 463 GIQHIAQAISNNKSIRRLNLATNEIGVEGARYLAESIKLNSTIVYFDLAMNQLGNEGTKA 522

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           ++E L+++ +I T+ L   QI   G + +  +L  N TIS+++L  N L  +  + L Q 
Sbjct: 523 ITEALEYNKSIKTIVLSHNQIDIEGVQSILTLLNSNRTISVINLEGNHLAPDTQR-LFQK 581

Query: 523 F 523
           F
Sbjct: 582 F 582



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 188/346 (54%), Gaps = 32/346 (9%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           A+  +NL  N IGD G+  L   L  N+ V  L LS  +L     + +A LL        
Sbjct: 224 AITHINLFSNQIGDLGLLKLVQALHYNSSVTFLGLSYCNLTARSGEPLANLLA------- 276

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
                                +N+T+R L L+ N  G+ GA + A GL  NKSLR L L 
Sbjct: 277 ---------------------KNTTLRELILSYNALGSSGAVSFAAGLAKNKSLRSLSLS 315

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +GD+G + +   L+S +  L+ L++  NSIS++G+ +++  ++  KS++ I+L+ N+
Sbjct: 316 HNELGDDGTKEIALSLASNQS-LSELNLRCNSISSEGSNYISTSLQINKSIVEIDLWGNN 374

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYNPIGA 457
           IGD GA KI  AL  N ++ +I+L  N I  +G  +IA  L   +S IT++DL+ N +GA
Sbjct: 375 IGDYGATKIGVALSLNHSLKSINLTRNCIQ-QGIGSIASALCSASSKITTIDLSANALGA 433

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
            GA  ++++++   +I ++ L   +  ++G + +A  +  N +I  L+L  N +  EGA+
Sbjct: 434 IGAIEIAKIIRATTSIESMTLSSNKFESNGIQHIAQAISNNKSIRRLNLATNEIGVEGAR 493

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
            LA+S K +N  +   DLA N++ ++G  AI +AL+ N+ +    L
Sbjct: 494 YLAESIK-LNSTIVYFDLAMNQLGNEGTKAITEALEYNKSIKTIVL 538



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 144/301 (47%), Gaps = 31/301 (10%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++  S+ +S    GD+G   +A SL  NQ+  E++   N I++ G       LQ N ++ 
Sbjct: 307 KSLRSLSLSHNELGDDGTKEIALSLASNQSLSELNLRCNSISSEGSNYISTSLQINKSIV 366

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            ++L GN IG                            D GA  I   L  N  L+ + L
Sbjct: 367 EIDLWGNNIG----------------------------DYGATKIGVALSLNHSLKSINL 398

Query: 282 NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
             N I   G  S+A AL   +S I ++ L+ N  GA+GA  +AK +    S+  + L  N
Sbjct: 399 TRNCIQ-QGIGSIASALCSASSKITTIDLSANALGAIGAIEIAKIIRATTSIESMTLSSN 457

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
                GI+ +   +S+ K  +  L++  N I  +GA ++AE IK   ++++ +L MN +G
Sbjct: 458 KFESNGIQHIAQAISNNKS-IRRLNLATNEIGVEGARYLAESIKLNSTIVYFDLAMNQLG 516

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           +EG + I +AL+ N++I TI L  N I  +G  +I  +L  N  I+ ++L  N +  D  
Sbjct: 517 NEGTKAITEALEYNKSIKTIVLSHNQIDIEGVQSILTLLNSNRTISVINLEGNHLAPDTQ 576

Query: 461 K 461
           +
Sbjct: 577 R 577


>gi|320166000|gb|EFW42899.1| hypothetical protein CAOG_08031 [Capsaspora owczarzaki ATCC 30864]
          Length = 886

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 191/383 (49%), Gaps = 23/383 (6%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           A  +A    L+ N  L  LNL  N IGD G K + + L  N  V  L L+   + D GA+
Sbjct: 35  AEAQAIAEALKVNRRLTELNLGWNQIGDAGAKAIAEALKVNRTVTVLGLNENQIGDAGAE 94

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAE--------ALLENSTIRSLHLNGNYGGA 316
            IAE LK N  L VL L+NN I   G   L +        AL          L  +   A
Sbjct: 95  VIAETLKVNDRLSVLSLDNNFIAEHGINRLKQVGNTACNPALERQHPPPPAQLQSHAAHA 154

Query: 317 -LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
              AN   +  +  +S   +    +   D+     +   S R      L++    I   G
Sbjct: 155 KFQANVSTESPQVARSTENVTQRQHQWYDK-----VKNASER------LNLCTKQIDDAG 203

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +AE ++   ++  ++L  N I D GA+ I++ALK N T+  IDLGGN I   GA AI
Sbjct: 204 AQTIAETLQLNTTVRKLDLSNNQIADAGAQAISEALKVNTTMNHIDLGGNLIGEAGAQAI 263

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           A  LK N+  T L L+ N IG  GA+A++  LK +  + TL L   QIG +GA+ + + L
Sbjct: 264 AGALKVNTTPTFLFLSVNQIGDTGAQAIAASLKVNKMLTTLNLRATQIGDTGAQAIGEGL 323

Query: 496 RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           + N T++ LDL  N + D   + +A++ K VN  +T + L +N+I D GA AIA+ALK N
Sbjct: 324 KVNKTLTSLDLSFNRVGDAAVRAIAEALK-VNTVVTELYLYYNQIGDAGAQAIAEALKVN 382

Query: 556 EDVAVTSLNLANNFLTKFGQSAL 578
           + V    L L  N +++ G +AL
Sbjct: 383 KTVMF--LKLDRNVISETGSNAL 403



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 172/348 (49%), Gaps = 29/348 (8%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D  A+AIAE LK N  L  L L  N I  +G  ++AEAL  N T+  L LN N  G  GA
Sbjct: 34  DAEAQAIAEALKVNRRLTELNLGWNQIGDAGAKAIAEALKVNRTVTVLGLNENQIGDAGA 93

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRAL-------MSGLSSRKGKLAVLDIGNNSIS 372
             +A+ L+ N  L  L L  N I + GI  L        +    R+       + +++  
Sbjct: 94  EVIAETLKVNDRLSVLSLDNNFIAEHGINRLKQVGNTACNPALERQHPPPPAQLQSHAAH 153

Query: 373 AK-------GAFHVAEYIKNC--KSLLW----------INLYMNDIGDEGAEKIADALKQ 413
           AK        +  VA   +N   +   W          +NL    I D GA+ IA+ L+ 
Sbjct: 154 AKFQANVSTESPQVARSTENVTQRQHQWYDKVKNASERLNLCTKQIDDAGAQTIAETLQL 213

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N T+  +DL  N I   GA AI+  LK N+ +  +DL  N IG  GA+A++  LK +   
Sbjct: 214 NTTVRKLDLSNNQIADAGAQAISEALKVNTTMNHIDLGGNLIGEAGAQAIAGALKVNTTP 273

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
             L L   QIG +GA+ +A  L+ N  ++ L+LRA  + D GA+ + +  K VN+ LTS+
Sbjct: 274 TFLFLSVNQIGDTGAQAIAASLKVNKMLTTLNLRATQIGDTGAQAIGEGLK-VNKTLTSL 332

Query: 534 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           DL+FN + D    AIA+ALK N    VT L L  N +   G  A+ +A
Sbjct: 333 DLSFNRVGDAAVRAIAEALKVN--TVVTELYLYYNQIGDAGAQAIAEA 378



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 175/382 (45%), Gaps = 30/382 (7%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  R  + +++     GD G   +AE+L  N+T   +    N I  AG +   
Sbjct: 38  QAIAEALKVNRRLTELNLGWNQIGDAGAKAIAEALKVNRTVTVLGLNENQIGDAGAEVIA 97

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDI--LVDNAGVERLQ-LSSVDLRDEGAKA--- 265
             L+ N  L  L+L  N I + G+  L  +     N  +ER        L+   A A   
Sbjct: 98  ETLKVNDRLSVLSLDNNFIAEHGINRLKQVGNTACNPALERQHPPPPAQLQSHAAHAKFQ 157

Query: 266 ---------IAELLKN-------------NSILRVLELNNNMIDYSGFTSLAEALLENST 303
                    +A   +N             N+  R L L    ID +G  ++AE L  N+T
Sbjct: 158 ANVSTESPQVARSTENVTQRQHQWYDKVKNASER-LNLCTKQIDDAGAQTIAETLQLNTT 216

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           +R L L+ N     GA A+++ L+ N ++  + L GN IG+ G +A+   L         
Sbjct: 217 VRKLDLSNNQIADAGAQAISEALKVNTTMNHIDLGGNLIGEAGAQAIAGALKVNTTP-TF 275

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +  N I   GA  +A  +K  K L  +NL    IGD GA+ I + LK N+T+T++DL 
Sbjct: 276 LFLSVNQIGDTGAQAIAASLKVNKMLTTLNLRATQIGDTGAQAIGEGLKVNKTLTSLDLS 335

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N +      AIA  LK N+V+T L L YN IG  GA+A++E LK +  +  LKL    I
Sbjct: 336 FNRVGDAAVRAIAEALKVNTVVTELYLYYNQIGDAGAQAIAEALKVNKTVMFLKLDRNVI 395

Query: 484 GASGAEFVADMLRYNNTISILD 505
             +G+  +  +      +SIL+
Sbjct: 396 SETGSNALQQVGNKTCNLSILN 417



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 119/248 (47%), Gaps = 33/248 (13%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           LH    GD   +A+   L   + +L  L++G N I   GA  +AE +K  +++  + L  
Sbjct: 27  LHERQYGDAEAQAIAEALKVNR-RLTELNLGWNQIGDAGAKAIAEALKVNRTVTVLGLNE 85

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IGD GAE IA+ LK N  ++ + L  N I   G + + +V  + +   +L+  + P  
Sbjct: 86  NQIGDAGAEVIAETLKVNDRLSVLSLDNNFIAEHGINRLKQV-GNTACNPALERQHPPPP 144

Query: 457 ADGAKALSEVLKFHGNINT---------------------------LKLGWC--QIGASG 487
           A   ++ +   KF  N++T                            +L  C  QI  +G
Sbjct: 145 AQ-LQSHAAHAKFQANVSTESPQVARSTENVTQRQHQWYDKVKNASERLNLCTKQIDDAG 203

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
           A+ +A+ L+ N T+  LDL  N + D GA+ ++++ K VN  +  IDL  N I + GA A
Sbjct: 204 AQTIAETLQLNTTVRKLDLSNNQIADAGAQAISEALK-VNTTMNHIDLGGNLIGEAGAQA 262

Query: 548 IAQALKAN 555
           IA ALK N
Sbjct: 263 IAGALKVN 270



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 60/259 (23%)

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            V + +KN     W +L+    GD  A+ IA+ALK NR +T ++LG N I   GA AIA 
Sbjct: 13  EVYDIVKNASQ--WFSLHERQYGDAEAQAIAEALKVNRRLTELNLGWNQIGDAGAKAIAE 70

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL------------------- 478
            LK N  +T L L  N IG  GA+ ++E LK +  ++ L L                   
Sbjct: 71  ALKVNRTVTVLGLNENQIGDAGAEVIAETLKVNDRLSVLSLDNNFIAEHGINRLKQVGNT 130

Query: 479 --------------GWCQIGASGAEFVADML----------------------RYNNTIS 502
                            Q  A+ A+F A++                       +  N   
Sbjct: 131 ACNPALERQHPPPPAQLQSHAAHAKFQANVSTESPQVARSTENVTQRQHQWYDKVKNASE 190

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L+L    + D GA+ +A++ + +N  +  +DL+ N+I D GA AI++ALK N    +  
Sbjct: 191 RLNLCTKQIDDAGAQTIAETLQ-LNTTVRKLDLSNNQIADAGAQAISEALKVN--TTMNH 247

Query: 563 LNLANNFLTKFGQSALTDA 581
           ++L  N + + G  A+  A
Sbjct: 248 IDLGGNLIGEAGAQAIAGA 266


>gi|26348215|dbj|BAC37747.1| unnamed protein product [Mus musculus]
          Length = 312

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/301 (36%), Positives = 162/301 (53%), Gaps = 1/301 (0%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+ N IG++G K L   L+ N  +  L L S  +   GAKA+A+ LK N  L  L L +N
Sbjct: 5   LAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSN 64

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           +I   G   +AEAL+ N TI  L L  N  G +GA  +A  L+ N+SL+ L    N+IGD
Sbjct: 65  VIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGD 124

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G  AL   L   +  L  LD+ +NSIS  G   +   + + ++L  +NL  N I  EGA
Sbjct: 125 RGAIALAEALKVNQ-ILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGA 183

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + +  AL +N T+  +DL  N +H +GA AIA  + +N  +T L L +N I A  A+AL 
Sbjct: 184 QALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALG 243

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           + L+ +  + TL L    IG  GA  VA  L+ N T+  L L+   +  +GA+ L ++  
Sbjct: 244 QALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALT 303

Query: 525 V 525
           V
Sbjct: 304 V 304



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 170/310 (54%), Gaps = 1/310 (0%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S A N I   G KA    L  N +L TL+L  N IG  G K L D L  N  +  L L S
Sbjct: 4   SLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQS 63

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             ++D+G   +AE L +N  + +L+L  N+I   G   +A+AL +N ++++L  + N  G
Sbjct: 64  NVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIG 123

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA ALA+ L+ N+ L  L L  NSI D G+  LM  L S +  L+ L++  NSIS +G
Sbjct: 124 DRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQ-TLSSLNLRENSISPEG 182

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  + + +    +L  ++L  N + D GA+ IA A+ +N ++T + L  N I +  A A+
Sbjct: 183 AQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARAL 242

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
            + L+ N  +T+LDL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L
Sbjct: 243 GQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEAL 302

Query: 496 RYNNTISILD 505
             N T+ IL+
Sbjct: 303 TVNRTLEILE 312



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/304 (35%), Positives = 158/304 (51%), Gaps = 1/304 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G++G   LA SL  N++   +   +N I   G KA    L+ N  L +L+L  N I D+
Sbjct: 10  IGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDD 69

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           GV C+ + LV N  +  LQL    +   GA+ +A+ LK N  L+ L  ++N I   G  +
Sbjct: 70  GVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIA 129

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LAEAL  N  + +L L  N    +G   L + L  N++L  L+L  NSI  EG +AL   
Sbjct: 130 LAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQA 189

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L  R   L  LD+  N +  +GA  +A  +    SL  ++L  N I    A  +  AL+ 
Sbjct: 190 L-CRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQL 248

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           NRT+TT+DL  N I  +GAS++A  LK N+ + +L L    IG+ GA+AL E L  +  +
Sbjct: 249 NRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTL 308

Query: 474 NTLK 477
             L+
Sbjct: 309 EILE 312



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 156/286 (54%), Gaps = 2/286 (0%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N I   G  +LA +LL N ++ +L L  N  G  GA ALA  L+ N++L  L L  N
Sbjct: 5   LAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSN 64

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            I D+G+  +   L S +  +++L +  N I   GA  +A+ +K  +SL  +    N IG
Sbjct: 65  VIKDDGVMCVAEALVSNQ-TISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIG 123

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D GA  +A+ALK N+ +  +DL  N+I   G + + R L  N  ++SL+L  N I  +GA
Sbjct: 124 DRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGA 183

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
           +AL++ L  +  +  L L    +   GA+ +A  +  N++++ L L+ N ++   A+ L 
Sbjct: 184 QALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALG 243

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
           Q+ ++ N  LT++DL  N I D+GA ++A ALK N  +    L +A
Sbjct: 244 QALQL-NRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVA 288



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/270 (36%), Positives = 143/270 (52%), Gaps = 4/270 (1%)

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N  G  GA ALA+ L  N+SL  L L  NSIG  G +AL   L   +  L  L + +N I
Sbjct: 8   NQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINR-TLTSLSLQSNVI 66

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
              G   VAE + + +++  + L  N IG  GA+++ADALKQNR++  +    N I  +G
Sbjct: 67  KDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRG 126

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A A+A  LK N ++ +LDL  N I   G   L   L  +  +++L L    I   GA+ +
Sbjct: 127 AIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQAL 186

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
              L  NNT+  LDL AN L D GA+ +A +    N +LT + L +N I+   A A+ QA
Sbjct: 187 TQALCRNNTLKHLDLTANLLHDRGAQAIAVAVG-ENHSLTHLHLQWNFIQAGAARALGQA 245

Query: 552 LKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           L+ N    +T+L+L  N +   G S++  A
Sbjct: 246 LQLNR--TLTTLDLQENAIGDEGASSVAGA 273



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 143/288 (49%), Gaps = 1/288 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+  ++D+   + G  G   LA++L  N+T   +S  +N I   G+      L SN  + 
Sbjct: 26  RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 85

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IG  G + + D L  N  ++ L  SS  + D GA A+AE LK N IL  L+L
Sbjct: 86  MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 145

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I   G T L  AL  N T+ SL+L  N     GA AL + L  N +L+ L L  N 
Sbjct: 146 QSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANL 205

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D G +A+   +      L  L +  N I A  A  + + ++  ++L  ++L  N IGD
Sbjct: 206 LHDRGAQAIAVAVGENH-SLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGD 264

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           EGA  +A ALK N T+  + L   +I S+GA A+   L  N  +  L+
Sbjct: 265 EGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILE 312



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 102/204 (50%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + +  K+ R+  ++  S    GD G   LAE+L  NQ  E +   +N I+  G+    
Sbjct: 100 QQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLM 159

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L SN  L +LNL  N I  EG + L   L  N  ++ L L++  L D GA+AIA  + 
Sbjct: 160 RALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVG 219

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L  N I      +L +AL  N T+ +L L  N  G  GA+++A  L+ N +
Sbjct: 220 ENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTT 279

Query: 332 LRELHLHGNSIGDEGIRALMSGLS 355
           L  L+L   SIG +G +AL   L+
Sbjct: 280 LIALYLQVASIGSQGAQALGEALT 303



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 57/132 (43%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  Q L +          +D++     D G   +A ++G N +   +    N I A   +
Sbjct: 181 EGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAAR 240

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    LQ N  L TL+L  N IGDEG   +   L  N  +  L L    +  +GA+A+ E
Sbjct: 241 ALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGE 300

Query: 269 LLKNNSILRVLE 280
            L  N  L +LE
Sbjct: 301 ALTVNRTLEILE 312


>gi|320165045|gb|EFW41944.1| hypothetical protein CAOG_07076 [Capsaspora owczarzaki ATCC 30864]
          Length = 298

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/273 (39%), Positives = 155/273 (56%), Gaps = 2/273 (0%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N IG++G + + + L  N  + ++ L+   + D GA+AIAE L+ N+ +  L L  N
Sbjct: 21  LHDNQIGEDGARAIAETLKVNTTLTKINLTENQIGDAGARAIAETLRVNTTVTDLGLWKN 80

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  +L+ AL  N T+  + LNGN  G  GA A+A+ L+ N +L  L LH N +GD
Sbjct: 81  QIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLANLGLHNNKLGD 140

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G  A+   L   K  L  L + NN I   GA  +AE +K  K+L W+NL  N IGD GA
Sbjct: 141 AGATAIAEMLKVNK-MLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGA 199

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKAL 463
           + IA+ALK N T+  + L  N I   GA AIA  LK +N+ +  L L  N IG  GA+A+
Sbjct: 200 QAIAEALKVNTTLPCLVLQQNQIGDAGAHAIAEALKVNNTGLIVLFLNENEIGNAGAQAI 259

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           +E LK +  +  L LG  QIG +GA+ +A+  +
Sbjct: 260 AEALKVNTTLIVLLLGDNQIGDAGAQAIAEAFK 292



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/277 (39%), Positives = 160/277 (57%), Gaps = 2/277 (0%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           E   L    + ++GA+AIAE LK N+ L  + L  N I  +G  ++AE L  N+T+  L 
Sbjct: 17  EWFSLHDNQIGEDGARAIAETLKVNTTLTKINLTENQIGDAGARAIAETLRVNTTVTDLG 76

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L  N  G  GA+AL+  L+ NK+L ++ L+GN IGD G +A+   L      LA L + N
Sbjct: 77  LWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNT-TLANLGLHN 135

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N +   GA  +AE +K  K L  ++L  N IG+ GA  IA+ALK N+T+T ++L  N I 
Sbjct: 136 NKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQIG 195

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASG 487
             GA AIA  LK N+ +  L L  N IG  GA A++E LK +   +  L L   +IG +G
Sbjct: 196 DAGAQAIAEALKVNTTLPCLVLQQNQIGDAGAHAIAEALKVNNTGLIVLFLNENEIGNAG 255

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           A+ +A+ L+ N T+ +L L  N + D GA+ +A++FK
Sbjct: 256 AQAIAEALKVNTTLIVLLLGDNQIGDAGAQAIAEAFK 292



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/278 (39%), Positives = 158/278 (56%), Gaps = 9/278 (3%)

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           SLH   N  G  GA A+A+ L+ N +L +++L  N IGD G RA+   L   +    V D
Sbjct: 20  SLH--DNQIGEDGARAIAETLKVNTTLTKINLTENQIGDAGARAIAETL---RVNTTVTD 74

Query: 366 IG--NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +G   N I   GA  ++  +K  K+L+ I+L  N IGD GA+ IA+ LK N T+  + L 
Sbjct: 75  LGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLANLGLH 134

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N +   GA+AIA +LK N ++TSL L  N IG  GA A++E LK +  +  L L   QI
Sbjct: 135 NNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQI 194

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G +GA+ +A+ L+ N T+  L L+ N + D GA  +A++ KV N  L  + L  NEI + 
Sbjct: 195 GDAGAQAIAEALKVNTTLPCLVLQQNQIGDAGAHAIAEALKVNNTGLIVLFLNENEIGNA 254

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           GA AIA+ALK N  + V  L L +N +   G  A+ +A
Sbjct: 255 GAQAIAEALKVNTTLIV--LLLGDNQIGDAGAQAIAEA 290



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 2/268 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G++G   +AE+L  N T  +++   N I  AG +A    L+ N  +  L L  N IGD 
Sbjct: 26  IGEDGARAIAETLKVNTTLTKINLTENQIGDAGARAIAETLRVNTTVTDLGLWKNQIGDA 85

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   L   L  N  + ++ L+   + D GA+AIAE LK N+ L  L L+NN +  +G T+
Sbjct: 86  GAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATA 145

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AE L  N  + SL L+ N  G  GA A+A+ L+ NK+L  L+L  N IGD G +A+   
Sbjct: 146 IAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEA 205

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALK 412
           L      L  L +  N I   GA  +AE +K N   L+ + L  N+IG+ GA+ IA+ALK
Sbjct: 206 LKVNT-TLPCLVLQQNQIGDAGAHAIAEALKVNNTGLIVLFLNENEIGNAGAQAIAEALK 264

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLK 440
            N T+  + LG N I   GA AIA   K
Sbjct: 265 VNTTLIVLLLGDNQIGDAGAQAIAEAFK 292



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 133/249 (53%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + ++++    GD G   +AE+L  N T  ++    N I  AG  A    L+ N  L  +
Sbjct: 44  LTKINLTENQIGDAGARAIAETLRVNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKI 103

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+GN IGD G + + + L  N  +  L L +  L D GA AIAE+LK N +L  L L+N
Sbjct: 104 DLNGNQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDN 163

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  ++AEAL  N T+  L+L+ N  G  GA A+A+ L+ N +L  L L  N IG
Sbjct: 164 NQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLQQNQIG 223

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G  A+   L      L VL +  N I   GA  +AE +K   +L+ + L  N IGD G
Sbjct: 224 DAGAHAIAEALKVNNTGLIVLFLNENEIGNAGAQAIAEALKVNTTLIVLLLGDNQIGDAG 283

Query: 404 AEKIADALK 412
           A+ IA+A K
Sbjct: 284 AQAIAEAFK 292



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/201 (41%), Positives = 120/201 (59%), Gaps = 5/201 (2%)

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +KN +   W +L+ N IG++GA  IA+ LK N T+T I+L  N I   GA AIA  L+
Sbjct: 10  DKVKNARE--WFSLHDNQIGEDGARAIAETLKVNTTLTKINLTENQIGDAGARAIAETLR 67

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ +T L L  N IG  GA ALS  LK +  +  + L   QIG +GA+ +A+ L+ N T
Sbjct: 68  VNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTT 127

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           ++ L L  N L D GA  +A+  K VN+ LTS+ L  N+I + GA AIA+ALK N+   +
Sbjct: 128 LANLGLHNNKLGDAGATAIAEMLK-VNKMLTSLSLDNNQIGNAGALAIAEALKVNK--TL 184

Query: 561 TSLNLANNFLTKFGQSALTDA 581
           T LNL+ N +   G  A+ +A
Sbjct: 185 TWLNLSENQIGDAGAQAIAEA 205



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 92/186 (49%), Gaps = 4/186 (2%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     +++ +     GD G   +AE L  N+    +S   N I  AG  A  
Sbjct: 116 QAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIA 175

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNLS N IGD G + + + L  N  +  L L    + D GA AIAE LK
Sbjct: 176 EALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLQQNQIGDAGAHAIAEALK 235

Query: 272 -NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
            NN+ L VL LN N I  +G  ++AEAL  N+T+  L L  N  G  GA A+A+     K
Sbjct: 236 VNNTGLIVLFLNENEIGNAGAQAIAEALKVNTTLIVLLLGDNQIGDAGAQAIAEAF---K 292

Query: 331 SLRELH 336
           S  ELH
Sbjct: 293 SGAELH 298


>gi|326433023|gb|EGD78593.1| hypothetical protein PTSG_09285 [Salpingoeca sp. ATCC 50818]
          Length = 1250

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/261 (40%), Positives = 156/261 (59%), Gaps = 2/261 (0%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++AEAL +N+ ++ L+L GN  G  GA ALA+ L+ N +L  L L  NSIGDEG  AL  
Sbjct: 55  AVAEALKDNTCLKRLYLWGNSIGPEGAVALAEMLKHNTTLERLSLRWNSIGDEGAAALAE 114

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  L + NNSI  +GA  +AE +K+  +L  + L  N IGD+GA  +A+ LK
Sbjct: 115 MLKHNT-TLEELSLYNNSIGDEGAVALAEMLKHNTALETLYLDNNSIGDQGAVVLAEMLK 173

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+T ++LG N+I  +GA A+A +LK N+ +  L L  N IG  GA AL+E+LK +  
Sbjct: 174 HNTTMTGLNLGANSIGDEGAVALAEMLKHNTALKELYLEGNSIGNQGAVALAEMLKHNTT 233

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           +  L L   ++G  GA  +A+ML++N T++ L+L AN + DEGA  LA+  K  N  LT 
Sbjct: 234 LERLFLERNRVGDKGAVALAEMLKHNTTLTGLNLGANSIGDEGAVALAEMLK-HNTTLTW 292

Query: 533 IDLAFNEIRDDGAFAIAQALK 553
           + +  N I + G   + + L+
Sbjct: 293 LGIGRNRITERGMVNVLKQLQ 313



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/259 (39%), Positives = 146/259 (56%), Gaps = 1/259 (0%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +AE+L  N   + +    N I   G  A   +L+ N  L+ L+L  N IGDEG   L ++
Sbjct: 56  VAEALKDNTCLKRLYLWGNSIGPEGAVALAEMLKHNTTLERLSLRWNSIGDEGAAALAEM 115

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  +E L L +  + DEGA A+AE+LK+N+ L  L L+NN I   G   LAE L  N
Sbjct: 116 LKHNTTLEELSLYNNSIGDEGAVALAEMLKHNTALETLYLDNNSIGDQGAVVLAEMLKHN 175

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           +T+  L+L  N  G  GA ALA+ L+ N +L+EL+L GNSIG++G  AL   L      L
Sbjct: 176 TTMTGLNLGANSIGDEGAVALAEMLKHNTALKELYLEGNSIGNQGAVALAEMLKHNT-TL 234

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +  N +  KGA  +AE +K+  +L  +NL  N IGDEGA  +A+ LK N T+T + 
Sbjct: 235 ERLFLERNRVGDKGAVALAEMLKHNTTLTGLNLGANSIGDEGAVALAEMLKHNTTLTWLG 294

Query: 422 LGGNNIHSKGASAIARVLK 440
           +G N I  +G   + + L+
Sbjct: 295 IGRNRITERGMVNVLKQLQ 313



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 180/348 (51%), Gaps = 9/348 (2%)

Query: 205 AGIKAFDGV------LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
           A  K  DGV      + +N      NL G  +G    + + + L DN  ++RL L    +
Sbjct: 17  AQTKLMDGVKHKIRAIANNTCGDYENLGGYGLGAIEARAVAEALKDNTCLKRLYLWGNSI 76

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
             EGA A+AE+LK+N+ L  L L  N I   G  +LAE L  N+T+  L L  N  G  G
Sbjct: 77  GPEGAVALAEMLKHNTTLERLSLRWNSIGDEGAAALAEMLKHNTTLEELSLYNNSIGDEG 136

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A ALA+ L+ N +L  L+L  NSIGD+G   L   L      +  L++G NSI  +GA  
Sbjct: 137 AVALAEMLKHNTALETLYLDNNSIGDQGAVVLAEMLKHNT-TMTGLNLGANSIGDEGAVA 195

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +K+  +L  + L  N IG++GA  +A+ LK N T+  + L  N +  KGA A+A +
Sbjct: 196 LAEMLKHNTALKELYLEGNSIGNQGAVALAEMLKHNTTLERLFLERNRVGDKGAVALAEM 255

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK N+ +T L+L  N IG +GA AL+E+LK +  +  L +G  +I   G   V   L++ 
Sbjct: 256 LKHNTTLTGLNLGANSIGDEGAVALAEMLKHNTTLTWLGIGRNRITERGMVNVLKQLQHI 315

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
           +  + + L  + L+   A  +A++   +      I++ F     +  F
Sbjct: 316 DAKAKIRLFEDKLKSSTA--VARALATLRTKQPDINVVFAPFDSEDKF 361



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 143/271 (52%), Gaps = 3/271 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G + G EG   LAE L +N T E +S   N I   G  A   +L+ N  L+ L+L  N
Sbjct: 71  LWGNSIGPEGAVALAEMLKHNTTLERLSLRWNSIGDEGAAALAEMLKHNTTLEELSLYNN 130

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGDEG   L ++L  N  +E L L +  + D+GA  +AE+LK+N+ +  L L  N I  
Sbjct: 131 SIGDEGAVALAEMLKHNTALETLYLDNNSIGDQGAVVLAEMLKHNTTMTGLNLGANSIGD 190

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  +LAE L  N+ ++ L+L GN  G  GA ALA+ L+ N +L  L L  N +GD+G  
Sbjct: 191 EGAVALAEMLKHNTALKELYLEGNSIGNQGAVALAEMLKHNTTLERLFLERNRVGDKGAV 250

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   L      L  L++G NSI  +GA  +AE +K+  +L W+ +  N I + G   + 
Sbjct: 251 ALAEMLKHNT-TLTGLNLGANSIGDEGAVALAEMLKHNTTLTWLGIGRNRITERGMVNVL 309

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVL 439
             L+       I L  + +  K ++A+AR L
Sbjct: 310 KQLQHIDAKAKIRLFEDKL--KSSTAVARAL 338



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 138/268 (51%), Gaps = 3/268 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E    L E  K       + +   + GDEG   LAE L +N T EE+S   N I   G  
Sbjct: 79  EGAVALAEMLKHNTTLERLSLRWNSIGDEGAAALAEMLKHNTTLEELSLYNNSIGDEGAV 138

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   +L+ N AL+TL L  N IGD+G   L ++L  N  +  L L +  + DEGA A+AE
Sbjct: 139 ALAEMLKHNTALETLYLDNNSIGDQGAVVLAEMLKHNTTMTGLNLGANSIGDEGAVALAE 198

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +LK+N+ L+ L L  N I   G  +LAE L  N+T+  L L  N  G  GA ALA+ L+ 
Sbjct: 199 MLKHNTALKELYLEGNSIGNQGAVALAEMLKHNTTLERLFLERNRVGDKGAVALAEMLKH 258

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L  L+L  NSIGDEG  AL   L      L  L IG N I+ +G  +V + +++  +
Sbjct: 259 NTTLTGLNLGANSIGDEGAVALAEMLKHNT-TLTWLGIGRNRITERGMVNVLKQLQHIDA 317

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRT 416
              I L+ + +    A  +A AL   RT
Sbjct: 318 KAKIRLFEDKLKSSTA--VARALATLRT 343



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/191 (40%), Positives = 114/191 (59%), Gaps = 1/191 (0%)

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           ++G   + A  A  VAE +K+   L  + L+ N IG EGA  +A+ LK N T+  + L  
Sbjct: 42  NLGGYGLGAIEARAVAEALKDNTCLKRLYLWGNSIGPEGAVALAEMLKHNTTLERLSLRW 101

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N+I  +GA+A+A +LK N+ +  L L  N IG +GA AL+E+LK +  + TL L    IG
Sbjct: 102 NSIGDEGAAALAEMLKHNTTLEELSLYNNSIGDEGAVALAEMLKHNTALETLYLDNNSIG 161

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
             GA  +A+ML++N T++ L+L AN + DEGA  LA+  K  N AL  + L  N I + G
Sbjct: 162 DQGAVVLAEMLKHNTTMTGLNLGANSIGDEGAVALAEMLK-HNTALKELYLEGNSIGNQG 220

Query: 545 AFAIAQALKAN 555
           A A+A+ LK N
Sbjct: 221 AVALAEMLKHN 231



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 101/177 (57%), Gaps = 3/177 (1%)

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A  +A+ALK N  +  + L GN+I  +GA A+A +LK N+ +  L L +N IG +GA AL
Sbjct: 53  ARAVAEALKDNTCLKRLYLWGNSIGPEGAVALAEMLKHNTTLERLSLRWNSIGDEGAAAL 112

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
           +E+LK +  +  L L    IG  GA  +A+ML++N  +  L L  N + D+GA  LA+  
Sbjct: 113 AEMLKHNTTLEELSLYNNSIGDEGAVALAEMLKHNTALETLYLDNNSIGDQGAVVLAEML 172

Query: 524 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           K  N  +T ++L  N I D+GA A+A+ LK N   A+  L L  N +   G  AL +
Sbjct: 173 K-HNTTMTGLNLGANSIGDEGAVALAEMLKHN--TALKELYLEGNSIGNQGAVALAE 226


>gi|320169274|gb|EFW46173.1| hypothetical protein CAOG_04141 [Capsaspora owczarzaki ATCC 30864]
          Length = 1055

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 141/460 (30%), Positives = 221/460 (48%), Gaps = 47/460 (10%)

Query: 170 SGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP 229
           SG+ FG      +A  L  N T   +      I   G  A    L+SN  L  L L  N 
Sbjct: 312 SGK-FGPAEANSIAAILKQNSTLTTLVLDNTKIGDLGAHAIGEALKSNTTLTALRLIDND 370

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IG  G + + + L  N  +  L LS+ ++ + GA+AIAE L  N  L  L      I  +
Sbjct: 371 IGSAGTQAIGEALKTNLALTTLVLST-EIGEAGARAIAEALVCNKTLTTLSQYWCSIGDA 429

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGAN-ALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           G  ++  AL +N+T+ SL+L  N     GA  A+ + L+ N +L EL L  N++   G +
Sbjct: 430 GVEAIVHALEKNTTLTSLNLKNNITLGSGAQAAIPRMLQVNTTLTELDLGANNLNSVGFQ 489

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+   L ++   L  L +  + +   GA  +A  +K+  +L  ++ +    GD GA+ IA
Sbjct: 490 AIAEAL-AKNTSLTKLSLMGDEMEVAGAQAIATALKSNTTLTTLDWF----GDAGAQAIA 544

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           DAL+QN+T+TT+ +G     + G  AI R L  N+ +T+L+L+ NPI   GA +++E+LK
Sbjct: 545 DALRQNKTLTTLQIG-----TAGLQAIGRALAQNNTLTTLNLSRNPIDDVGANSIAEMLK 599

Query: 469 FHGNINTLK-------------------------------LGWCQIGASGAEFVADMLRY 497
            + ++ TL                                + +  IGA GA+ +A+ L+ 
Sbjct: 600 SNTSLTTLDQLCFKVHEIAEALKQNTALTTLDLSSNARGFIAFNPIGAVGAQAIAEALKQ 659

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
           N T++ L L  N +   G K +A++ K VN ALT+++L    I D    AIA AL  N  
Sbjct: 660 NKTLTTLRLNNNAIGTAGVKPIAEALK-VNTALTTLELEDCSIGDAETQAIAPALVQN-- 716

Query: 558 VAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
             +TSL L N  L K G  ++        +++  EV   F
Sbjct: 717 TTLTSLKLGNGVLGKAGAHSIATVLKQNAKLTTLEVTARF 756



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 137/432 (31%), Positives = 215/432 (49%), Gaps = 47/432 (10%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            ++++L  N T  E+S     + A G ++    L  N  L TL++     G      +  
Sbjct: 269 VMSDALTQNTTLTELS---GYLDANGARSMAKALTQNATLTTLHVHSGKFGPAEANSIAA 325

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
           IL  N+ +  L L +  + D GA AI E LK+N+ L  L L +N I  +G  ++ EAL  
Sbjct: 326 ILKQNSTLTTLVLDNTKIGDLGAHAIGEALKSNTTLTALRLIDNDIGSAGTQAIGEALKT 385

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N  + +L L+   G A GA A+A+ L  NK+L  L  +  SIGD G+ A++  L  +   
Sbjct: 386 NLALTTLVLSTEIGEA-GARAIAEALVCNKTLTTLSQYWCSIGDAGVEAIVHAL-EKNTT 443

Query: 361 LAVLDIGNNSISAKGA-FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           L  L++ NN     GA   +   ++   +L  ++L  N++   G + IA+AL +N ++T 
Sbjct: 444 LTSLNLKNNITLGSGAQAAIPRMLQVNTTLTELDLGANNLNSVGFQAIAEALAKNTSLTK 503

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           + L G+ +   GA AIA  LK N+ +T+LD      G  GA+A+++ L+ +  + TL   
Sbjct: 504 LSLMGDEMEVAGAQAIATALKSNTTLTTLDW----FGDAGAQAIADALRQNKTLTTL--- 556

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ--------------SFKV 525
             QIG +G + +   L  NNT++ L+L  N + D GA  +A+               FKV
Sbjct: 557 --QIGTAGLQAIGRALAQNNTLTTLNLSRNPIDDVGANSIAEMLKSNTSLTTLDQLCFKV 614

Query: 526 --------VNEALTSIDL--------AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
                    N ALT++DL        AFN I   GA AIA+ALK N+   +T+L L NN 
Sbjct: 615 HEIAEALKQNTALTTLDLSSNARGFIAFNPIGAVGAQAIAEALKQNK--TLTTLRLNNNA 672

Query: 570 LTKFGQSALTDA 581
           +   G   + +A
Sbjct: 673 IGTAGVKPIAEA 684



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 213/445 (47%), Gaps = 37/445 (8%)

Query: 154  LNEFAKELR---AFSSVDMS--GRNF------GDEGLFFLAESLGYNQTAEEVSFAANGI 202
            ++E A+ L+   A +++D+S   R F      G  G   +AE+L  N+T   +    N I
Sbjct: 614  VHEIAEALKQNTALTTLDLSSNARGFIAFNPIGAVGAQAIAEALKQNKTLTTLRLNNNAI 673

Query: 203  TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
              AG+K     L+ N AL TL L    IGD   + +   LV N  +  L+L +  L   G
Sbjct: 674  GTAGVKPIAEALKVNTALTTLELEDCSIGDAETQAIAPALVQNTTLTSLKLGNGVLGKAG 733

Query: 263  AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG----------N 312
            A +IA +LK N+ L  LE+    +D SG   +A AL  N+T+ +  L             
Sbjct: 734  AHSIATVLKQNAKLTTLEVTARFVD-SGVQMIAAALKHNTTLTTFKLRDMKRYDPEFERE 792

Query: 313  YGGALGANALAK--------GLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
                L    L          GLE   S +  L L  N +   G++ +   LS  K     
Sbjct: 793  MSEPLTTERLLPQVRNPHGFGLEKALSRVSRLFLRENIVDSAGVQVIQEVLSLIKPSKLE 852

Query: 364  LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
            +  G +     GA  +A  +K    +  +NL  + +G  GA+ IA+AL QN  +  ++L 
Sbjct: 853  IYFGLDDF---GAQVLATSLKQNSWMTELNLRSSQVGPIGAQAIAEALTQNTKLIILNLS 909

Query: 424  GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
               +   GA AI++ L+ N+ +T+L+L    IG+ GA AL+E LK +  + +  L    I
Sbjct: 910  STQLGDAGAEAISKALRVNTTLTTLNLRECWIGSTGAMALAEELKHNVGLTSFDLSRNSI 969

Query: 484  GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
              SGA  +A ++  N T++ LDL  N + D GA+ LA++  + N  L  +DL +NEI + 
Sbjct: 970  RDSGANAMAAVISQNTTLTTLDLGKNHIGDAGAERLAEAL-LRNTTLKVLDLWYNEIGEA 1028

Query: 544  GAFAIAQALKANEDVAVTSLNLANN 568
            G  A+  AL  N+  A  SLNL+ N
Sbjct: 1029 GELALDNAL--NQKSAFVSLNLSEN 1051



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 219/473 (46%), Gaps = 83/473 (17%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
            +GK       ++    K+    +++ +     GD G   + E+L  N T   +    N 
Sbjct: 311 HSGKFGPAEANSIAAILKQNSTLTTLVLDNTKIGDLGAHAIGEALKSNTTLTALRLIDND 370

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN---------------A 246
           I +AG +A    L++N+AL TL LS   IG+ G + + + LV N               A
Sbjct: 371 IGSAGTQAIGEALKTNLALTTLVLS-TEIGEAGARAIAEALVCNKTLTTLSQYWCSIGDA 429

Query: 247 GVERL--------QLSSVDLRD-----EGAKA-IAELLKNNSILRVLELNNNMIDYSGFT 292
           GVE +         L+S++L++      GA+A I  +L+ N+ L  L+L  N ++  GF 
Sbjct: 430 GVEAIVHALEKNTTLTSLNLKNNITLGSGAQAAIPRMLQVNTTLTELDLGANNLNSVGFQ 489

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS----------- 341
           ++AEAL +N+++  L L G+     GA A+A  L+ N +L  L   G++           
Sbjct: 490 AIAEALAKNTSLTKLSLMGDEMEVAGAQAIATALKSNTTLTTLDWFGDAGAQAIADALRQ 549

Query: 342 --------IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
                   IG  G++A+   L+ +   L  L++  N I   GA  +AE +K+  SL  ++
Sbjct: 550 NKTLTTLQIGTAGLQAIGRALA-QNNTLTTLNLSRNPIDDVGANSIAEMLKSNTSLTTLD 608

Query: 394 -------------------------------LYMNDIGDEGAEKIADALKQNRTITTIDL 422
                                          +  N IG  GA+ IA+ALKQN+T+TT+ L
Sbjct: 609 QLCFKVHEIAEALKQNTALTTLDLSSNARGFIAFNPIGAVGAQAIAEALKQNKTLTTLRL 668

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I + G   IA  LK N+ +T+L+L    IG    +A++  L  +  + +LKLG   
Sbjct: 669 NNNAIGTAGVKPIAEALKVNTALTTLELEDCSIGDAETQAIAPALVQNTTLTSLKLGNGV 728

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
           +G +GA  +A +L+ N  ++ L++ A    D G + +A + K  N  LT+  L
Sbjct: 729 LGKAGAHSIATVLKQNAKLTTLEVTAR-FVDSGVQMIAAALK-HNTTLTTFKL 779



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 216/500 (43%), Gaps = 88/500 (17%)

Query: 174  FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            FGD G   +A++L  N+T   +      I  AG++A    L  N  L TLNLS NPI D 
Sbjct: 535  FGDAGAQAIADALRQNKTLTTLQ-----IGTAGLQAIGRALAQNNTLTTLNLSRNPIDDV 589

Query: 234  GVKCLCDILVDNAGVERLQ------------------LSSVDLRDE-------------G 262
            G   + ++L  N  +  L                   L+++DL                G
Sbjct: 590  GANSIAEMLKSNTSLTTLDQLCFKVHEIAEALKQNTALTTLDLSSNARGFIAFNPIGAVG 649

Query: 263  AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            A+AIAE LK N  L  L LNNN I  +G   +AEAL  N+ + +L L     G     A+
Sbjct: 650  AQAIAEALKQNKTLTTLRLNNNAIGTAGVKPIAEALKVNTALTTLELEDCSIGDAETQAI 709

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            A  L  N +L  L L    +G  G  ++ + L  +  KL  L++    + + G   +A  
Sbjct: 710  APALVQNTTLTSLKLGNGVLGKAGAHSIATVLK-QNAKLTTLEVTARFVDS-GVQMIAAA 767

Query: 383  IKNCKSLLWINLY-MNDIGDEGAEKIADALKQNRTITTI--------------------- 420
            +K+  +L    L  M     E   ++++ L   R +  +                     
Sbjct: 768  LKHNTTLTTFKLRDMKRYDPEFEREMSEPLTTERLLPQVRNPHGFGLEKALSRVSRLFLR 827

Query: 421  ----DLGGNNIHSK-------------------GASAIARVLKDNSVITSLDLAYNPIGA 457
                D  G  +  +                   GA  +A  LK NS +T L+L  + +G 
Sbjct: 828  ENIVDSAGVQVIQEVLSLIKPSKLEIYFGLDDFGAQVLATSLKQNSWMTELNLRSSQVGP 887

Query: 458  DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
             GA+A++E L  +  +  L L   Q+G +GAE ++  LR N T++ L+LR   +   GA 
Sbjct: 888  IGAQAIAEALTQNTKLIILNLSSTQLGDAGAEAISKALRVNTTLTTLNLRECWIGSTGAM 947

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 577
             LA+  K  N  LTS DL+ N IRD GA A+A  +  N    +T+L+L  N +   G   
Sbjct: 948  ALAEELKH-NVGLTSFDLSRNSIRDSGANAMAAVISQN--TTLTTLDLGKNHIGDAGAER 1004

Query: 578  LTDAKDLVYEMSEKEVNIFF 597
            L +A  L+   + K +++++
Sbjct: 1005 LAEA--LLRNTTLKVLDLWY 1022



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 144/322 (44%), Gaps = 40/322 (12%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D   + IA  L  N  L  L    N ID      +++AL +N+T+  L     Y  A GA
Sbjct: 241 DTKMQPIAAALAQNKTLTTL-WTQNYIDAV----MSDALTQNTTLTEL---SGYLDANGA 292

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            ++AK L  N +L  LH+H    G                                A  +
Sbjct: 293 RSMAKALTQNATLTTLHVHSGKFGP-----------------------------AEANSI 323

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A  +K   +L  + L    IGD GA  I +ALK N T+T + L  N+I S G  AI   L
Sbjct: 324 AAILKQNSTLTTLVLDNTKIGDLGAHAIGEALKSNTTLTALRLIDNDIGSAGTQAIGEAL 383

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           K N  +T+L L+   IG  GA+A++E L  +  + TL   WC IG +G E +   L  N 
Sbjct: 384 KTNLALTTLVLSTE-IGEAGARAIAEALVCNKTLTTLSQYWCSIGDAGVEAIVHALEKNT 442

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
           T++ L+L+ N     GA+        VN  LT +DL  N +   G  AIA+AL  N   +
Sbjct: 443 TLTSLNLKNNITLGSGAQAAIPRMLQVNTTLTELDLGANNLNSVGFQAIAEALAKN--TS 500

Query: 560 VTSLNLANNFLTKFGQSALTDA 581
           +T L+L  + +   G  A+  A
Sbjct: 501 LTKLSLMGDEMEVAGAQAIATA 522


>gi|290994500|ref|XP_002679870.1| predicted protein [Naegleria gruberi]
 gi|284093488|gb|EFC47126.1| predicted protein [Naegleria gruberi]
          Length = 344

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/335 (35%), Positives = 186/335 (55%), Gaps = 3/335 (0%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           ++ L GN + D   + + ++L  N  ++RL+L    +  EGA+ + E LK+N  L  L L
Sbjct: 5   SIELFGNELTDACCELVAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQTLTQLHL 64

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N +D  G  S+A+AL+ N+++ SL L  N  G+ G   LA+ L+ N  L ++ L GNS
Sbjct: 65  GGNKVDVVGIKSIADALINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQLKGNS 124

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I   G   L + L + +  L VL++ +N+I   G   + + +K+  S+  +N   N++GD
Sbjct: 125 IKAMGASCLSTALITNQ-SLKVLELQSNAIGPVGVKSLCQALKDNHSVHALNFNDNELGD 183

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLAYNPIGADGA 460
           EGA  +A+ LK N +ITT+ L  N I  KGA A+A  LK + + +T LDL  N IG  GA
Sbjct: 184 EGALYVANLLKVNPSITTLGLANNRIRKKGAVALAEALKCEQTAVTGLDLGNNEIGNGGA 243

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
            ALS  L  +  + +L L  C+I   G   +++M   N T+  LDL AN  +++GA   A
Sbjct: 244 VALSAALAVNTVLTSLDLRSCEIHLKGILALSNMAETNTTLRHLDLGANYAKNQGASSWA 303

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           Q     N +LT + L  N+I  +G  A+A  L++N
Sbjct: 304 QVLS-KNRSLTRLCLTDNQIYHEGGEALAIGLQSN 337



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 159/323 (49%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           F  +L     + + E  K  +    + +     G EG   L E L +NQT  ++    N 
Sbjct: 9   FGNELTDACCELVAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQTLTQLHLGGNK 68

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +   GIK+    L +N +L +L L  N IG +G+K L + L  N  +  +QL    ++  
Sbjct: 69  VDVVGIKSIADALINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQLKGNSIKAM 128

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA  ++  L  N  L+VLEL +N I   G  SL +AL +N ++ +L+ N N  G  GA  
Sbjct: 129 GASCLSTALITNQSLKVLELQSNAIGPVGVKSLCQALKDNHSVHALNFNDNELGDEGALY 188

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A  L+ N S+  L L  N I  +G  AL   L   +  +  LD+GNN I   GA  ++ 
Sbjct: 189 VANLLKVNPSITTLGLANNRIRKKGAVALAEALKCEQTAVTGLDLGNNEIGNGGAVALSA 248

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +     L  ++L   +I  +G   +++  + N T+  +DLG N   ++GAS+ A+VL  
Sbjct: 249 ALAVNTVLTSLDLRSCEIHLKGILALSNMAETNTTLRHLDLGANYAKNQGASSWAQVLSK 308

Query: 442 NSVITSLDLAYNPIGADGAKALS 464
           N  +T L L  N I  +G +AL+
Sbjct: 309 NRSLTRLCLTDNQIYHEGGEALA 331



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 4/342 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +   S+++ G    D     +AE L  N+  + +    N I   G +     L+ N  L 
Sbjct: 1   KQIISIELFGNELTDACCELVAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQTLT 60

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L GN +   G+K + D L++N  +  L L    +  +G K +AE LK+N+ L  ++L
Sbjct: 61  QLHLGGNKVDVVGIKSIADALINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQL 120

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G + L+ AL+ N +++ L L  N  G +G  +L + L+ N S+  L+ + N 
Sbjct: 121 KGNSIKAMGASCLSTALITNQSLKVLELQSNAIGPVGVKSLCQALKDNHSVHALNFNDNE 180

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK--SLLWINLYMNDI 399
           +GDEG    ++ L      +  L + NN I  KGA  +AE +K C+  ++  ++L  N+I
Sbjct: 181 LGDEG-ALYVANLLKVNPSITTLGLANNRIRKKGAVALAEALK-CEQTAVTGLDLGNNEI 238

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G+ GA  ++ AL  N  +T++DL    IH KG  A++ + + N+ +  LDL  N     G
Sbjct: 239 GNGGAVALSAALAVNTVLTSLDLRSCEIHLKGILALSNMAETNTTLRHLDLGANYAKNQG 298

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           A + ++VL  + ++  L L   QI   G E +A  L+ N T+
Sbjct: 299 ASSWAQVLSKNRSLTRLCLTDNQIYHEGGEALAIGLQSNYTL 340



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/262 (35%), Positives = 143/262 (54%), Gaps = 3/262 (1%)

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           I S+ L GN         +A+ L+ NK L+ L L  N IG EG R L  GL   +  L  
Sbjct: 3   IISIELFGNELTDACCELVAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQ-TLTQ 61

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +G N +   G   +A+ + N  SL  + L  N IG +G + +A+ LK N  ++ I L 
Sbjct: 62  LHLGGNKVDVVGIKSIADALINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQLK 121

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN+I + GAS ++  L  N  +  L+L  N IG  G K+L + LK + +++ L     ++
Sbjct: 122 GNSIKAMGASCLSTALITNQSLKVLELQSNAIGPVGVKSLCQALKDNHSVHALNFNDNEL 181

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G  GA +VA++L+ N +I+ L L  N +R +GA  LA++ K    A+T +DL  NEI + 
Sbjct: 182 GDEGALYVANLLKVNPSITTLGLANNRIRKKGAVALAEALKCEQTAVTGLDLGNNEIGNG 241

Query: 544 GAFAIAQALKANEDVAVTSLNL 565
           GA A++ AL  N    +TSL+L
Sbjct: 242 GAVALSAALAVN--TVLTSLDL 261



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 115/217 (52%), Gaps = 28/217 (12%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           VAE +K  K L  + L  N IG EGA  + + LK N+T+T + LGGN +   G  +IA  
Sbjct: 21  VAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQTLTQLHLGGNKVDVVGIKSIADA 80

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L +N+ +TSL L  N IG+DG K L+E LK +  ++ ++L    I A GA  ++  L  N
Sbjct: 81  LINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQLKGNSIKAMGASCLSTALITN 140

Query: 499 NTISILDLRANGLRDEGAKCLAQSFK---------------------------VVNEALT 531
            ++ +L+L++N +   G K L Q+ K                            VN ++T
Sbjct: 141 QSLKVLELQSNAIGPVGVKSLCQALKDNHSVHALNFNDNELGDEGALYVANLLKVNPSIT 200

Query: 532 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           ++ LA N IR  GA A+A+ALK  E  AVT L+L NN
Sbjct: 201 TLGLANNRIRKKGAVALAEALKC-EQTAVTGLDLGNN 236



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 114/222 (51%), Gaps = 29/222 (13%)

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           K ++ I L+ N++ D   E +A+ LK N+ +  + LG N I  +GA  +   LK N  +T
Sbjct: 1   KQIISIELFGNELTDACCELVAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQTLT 60

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            L L  N +   G K++++ L  + ++ +L L    IG+ G +++A+ L+ N  +S + L
Sbjct: 61  QLHLGGNKVDVVGIKSIADALINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQL 120

Query: 507 RANGLRDEGAKCLA------QSFKVV---------------------NEALTSIDLAFNE 539
           + N ++  GA CL+      QS KV+                     N ++ +++   NE
Sbjct: 121 KGNSIKAMGASCLSTALITNQSLKVLELQSNAIGPVGVKSLCQALKDNHSVHALNFNDNE 180

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           + D+GA  +A  LK N   ++T+L LANN + K G  AL +A
Sbjct: 181 LGDEGALYVANLLKVNP--SITTLGLANNRIRKKGAVALAEA 220



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 1/183 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           ++L +  K+  +  +++ +    GDEG  ++A  L  N +   +  A N I   G  A  
Sbjct: 159 KSLCQALKDNHSVHALNFNDNELGDEGALYVANLLKVNPSITTLGLANNRIRKKGAVALA 218

Query: 212 GVLQS-NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             L+    A+  L+L  N IG+ G   L   L  N  +  L L S ++  +G  A++ + 
Sbjct: 219 EALKCEQTAVTGLDLGNNEIGNGGAVALSAALAVNTVLTSLDLRSCEIHLKGILALSNMA 278

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           + N+ LR L+L  N     G +S A+ L +N ++  L L  N     G  ALA GL+ N 
Sbjct: 279 ETNTTLRHLDLGANYAKNQGASSWAQVLSKNRSLTRLCLTDNQIYHEGGEALAIGLQSNY 338

Query: 331 SLR 333
           +LR
Sbjct: 339 TLR 341


>gi|320163875|gb|EFW40774.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 482

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/258 (37%), Positives = 155/258 (60%), Gaps = 4/258 (1%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G + A  LA+GL+ NK+L  L+L+ N +GD G +A+   L      L  L++  N I   
Sbjct: 34  GEVEAEVLAEGLKVNKALTWLYLYENQLGDIGAQAIAEALKVNT-TLIKLNLPENQIGEA 92

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K   +L  +NL  N +GD+ A+  A+ALK N+T+T + L    I   GA A
Sbjct: 93  GAQAIAEALKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDTGAQA 152

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N+ +T L+L++N IG  GA A+++ LK +  + T+ L   QIG +GA  +A++
Sbjct: 153 IAEALKVNTTLTKLNLSWNQIGGAGAVAIADALKLNKTVTTIYLSGNQIGDAGARAIAEV 212

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L+ N T++ L L  N + D GA+ +A++ K VN+ LT+++L +N+I D GA AIA+A++ 
Sbjct: 213 LKVNTTLTELGLSENQIGDAGAQAIAEAIK-VNKILTNLELGWNQIGDAGAQAIAEAIEL 271

Query: 555 NEDVAVTSLNLANNFLTK 572
                +T LN     +T+
Sbjct: 272 G--TTLTRLNAVAQLITE 287



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 142/285 (49%), Gaps = 29/285 (10%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S++ +    FG+     LAE L  N+    +    N +   G +A    L+ N  L  LN
Sbjct: 24  SALSVHDFEFGEVEAEVLAEGLKVNKALTWLYLYENQLGDIGAQAIAEALKVNTTLIKLN 83

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N IG+ G + + + L  N  + +L LS   + D+ AKA AE LK N  L  L+L+  
Sbjct: 84  LPENQIGEAGAQAIAEALKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQV 143

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  ++AEAL  N+T+  L+L+ N  G  GA A+A  L+ NK++  ++L GN IGD
Sbjct: 144 QIGDTGAQAIAEALKVNTTLTKLNLSWNQIGGAGAVAIADALKLNKTVTTIYLSGNQIGD 203

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G RA                             +AE +K   +L  + L  N IGD GA
Sbjct: 204 AGARA-----------------------------IAEVLKVNTTLTELGLSENQIGDAGA 234

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           + IA+A+K N+ +T ++LG N I   GA AIA  ++  + +T L+
Sbjct: 235 QAIAEAIKVNKILTNLELGWNQIGDAGAQAIAEAIELGTTLTRLN 279



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 137/270 (50%), Gaps = 29/270 (10%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E  K  +A + + +     GD G   +AE+L  N T  +++   N I  AG +A  
Sbjct: 39  EVLAEGLKVNKALTWLYLYENQLGDIGAQAIAEALKVNTTLIKLNLPENQIGEAGAQAIA 98

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNLS N +GD+  K   + L  N  + RL+L  V + D GA+AIAE LK
Sbjct: 99  EALKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDTGAQAIAEALK 158

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  L L+ N I  +G  ++A+AL  N T+ +++L+GN  G  GA A+A+ L+ N +
Sbjct: 159 VNTTLTKLNLSWNQIGGAGAVAIADALKLNKTVTTIYLSGNQIGDAGARAIAEVLKVNTT 218

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L EL L  N IGD G +A                             +AE IK  K L  
Sbjct: 219 LTELGLSENQIGDAGAQA-----------------------------IAEAIKVNKILTN 249

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTID 421
           + L  N IGD GA+ IA+A++   T+T ++
Sbjct: 250 LELGWNQIGDAGAQAIAEAIELGTTLTRLN 279



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 15/203 (7%)

Query: 157 FAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           FA+ L+     + + +     GD G   +AE+L  N T  +++ + N I  AG  A    
Sbjct: 125 FAEALKVNKTLTRLKLHQVQIGDTGAQAIAEALKVNTTLTKLNLSWNQIGGAGAVAIADA 184

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  + T+ LSGN IGD G + + ++L  N  +  L LS   + D GA+AIAE +K N
Sbjct: 185 LKLNKTVTTIYLSGNQIGDAGARAIAEVLKVNTTLTELGLSENQIGDAGAQAIAEAIKVN 244

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
            IL  LEL  N I  +G  ++AEA+   +T+  L            NA+A+ +   K L 
Sbjct: 245 KILTNLELGWNQIGDAGAQAIAEAIELGTTLTRL------------NAVAQLITEAKKLN 292

Query: 334 ELHLHGNSIGDEGIRALMSGLSS 356
              ++ +S  +  + +L+  L+S
Sbjct: 293 YADVYADSQFNPLVLSLLPRLAS 315


>gi|452819223|gb|EME26288.1| FBox-LRR protein [Galdieria sulphuraria]
          Length = 988

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 206/373 (55%), Gaps = 29/373 (7%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E++ +   I++ G +     L+ N  L  L++       +GV+ L + L  N  + +L +
Sbjct: 303 EMNLSLKSISSEGAQYLSEALKVNNTLTELDIR------KGVQYLSEALKVNNTLTKLNI 356

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA-------EALLE-NSTIR 305
              ++  EGA+ ++E LK N+ L  L++ +N I   G   L        EA+ + N+T+ 
Sbjct: 357 GDNNIESEGAQYLSEALKVNNTLTKLDIRSNKIALEGVQYLXRSAIFNFEAIEKVNNTLT 416

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L++  N   + GA  L++ L+ N +L +L++  N+I  EG + L   L      L  LD
Sbjct: 417 KLNIRYNNIASEGAQYLSEALKVNNTLTKLNIRSNNIASEGAQYLSEALKV-NNTLTELD 475

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           I NN+ +A+            K+L  +N+  N++  EGA+ +++ALK N T+T +D+  N
Sbjct: 476 INNNN-NARI-----------KTLTKLNIGYNNVDSEGAQYLSEALKVNNTLTKLDIRSN 523

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I S+GA  ++  LK N+ +T LD++YN I ++GA+ LSE LK +  +  L +G+  I +
Sbjct: 524 KIESEGAQYLSEALKVNNTLTKLDISYNNIDSEGAQYLSEALKVNNTLTKLDIGYNNIAS 583

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI-RDDG 544
            G +++++ L+ NNT++ L++R N +  EGA+ L+++ K VN  LT ++++ N I  +D 
Sbjct: 584 EGVQYLSEALKVNNTLTKLNIRRNNIDSEGAQYLSEALK-VNNTLTKLNISGNAIPSEDI 642

Query: 545 AFAIAQALKANED 557
              I   LK N++
Sbjct: 643 RAKIHPYLKRNQE 655



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 189/341 (55%), Gaps = 32/341 (9%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           + LS   +  EGA+ ++E LK N+ L  L++        G   L+EAL  N+T+  L++ 
Sbjct: 304 MNLSLKSISSEGAQYLSEALKVNNTLTELDIR------KGVQYLSEALKVNNTLTKLNIG 357

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL-------MSGLSSRKGKLAV 363
            N   + GA  L++ L+ N +L +L +  N I  EG++ L          +      L  
Sbjct: 358 DNNIESEGAQYLSEALKVNNTLTKLDIRSNKIALEGVQYLXRSAIFNFEAIEKVNNTLTK 417

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL- 422
           L+I  N+I+++GA +++E +K   +L  +N+  N+I  EGA+ +++ALK N T+T +D+ 
Sbjct: 418 LNIRYNNIASEGAQYLSEALKVNNTLTKLNIRSNNIASEGAQYLSEALKVNNTLTELDIN 477

Query: 423 ---------------GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
                          G NN+ S+GA  ++  LK N+ +T LD+  N I ++GA+ LSE L
Sbjct: 478 NNNNARIKTLTKLNIGYNNVDSEGAQYLSEALKVNNTLTKLDIRSNKIESEGAQYLSEAL 537

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
           K +  +  L + +  I + GA+++++ L+ NNT++ LD+  N +  EG + L+++ KV N
Sbjct: 538 KVNNTLTKLDISYNNIDSEGAQYLSEALKVNNTLTKLDIGYNNIASEGVQYLSEALKV-N 596

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
             LT +++  N I  +GA  +++ALK N    +T LN++ N
Sbjct: 597 NTLTKLNIRRNNIDSEGAQYLSEALKVNN--TLTKLNISGN 635



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 189/359 (52%), Gaps = 27/359 (7%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S ++   EG  +L+E+L  N T  E+          G++     L+ N  L  LN+ 
Sbjct: 304 MNLSLKSISSEGAQYLSEALKVNNTLTELDI------RKGVQYLSEALKVNNTLTKLNIG 357

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE--------LLKNNSILRV 278
            N I  EG + L + L  N  + +L + S  +  EG + +          + K N+ L  
Sbjct: 358 DNNIESEGAQYLSEALKVNNTLTKLDIRSNKIALEGVQYLXRSAIFNFEAIEKVNNTLTK 417

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L +  N I   G   L+EAL  N+T+  L++  N   + GA  L++ L+ N +L EL ++
Sbjct: 418 LNIRYNNIASEGAQYLSEALKVNNTLTKLNIRSNNIASEGAQYLSEALKVNNTLTELDIN 477

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N+             ++R   L  L+IG N++ ++GA +++E +K   +L  +++  N 
Sbjct: 478 NNN-------------NARIKTLTKLNIGYNNVDSEGAQYLSEALKVNNTLTKLDIRSNK 524

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I  EGA+ +++ALK N T+T +D+  NNI S+GA  ++  LK N+ +T LD+ YN I ++
Sbjct: 525 IESEGAQYLSEALKVNNTLTKLDISYNNIDSEGAQYLSEALKVNNTLTKLDIGYNNIASE 584

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + LSE LK +  +  L +    I + GA+++++ L+ NNT++ L++  N +  E  +
Sbjct: 585 GVQYLSEALKVNNTLTKLNIRRNNIDSEGAQYLSEALKVNNTLTKLNISGNAIPSEDIR 643



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 169/326 (51%), Gaps = 27/326 (8%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           R+  Q L+E  K     + +++   N   EG  +L+E+L  N T  ++   +N I   G+
Sbjct: 335 RKGVQYLSEALKVNNTLTKLNIGDNNIESEGAQYLSEALKVNNTLTKLDIRSNKIALEGV 394

Query: 208 KA--------FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           +         F+ + + N  L  LN+  N I  EG + L + L  N  + +L + S ++ 
Sbjct: 395 QYLXRSAIFNFEAIEKVNNTLTKLNIRYNNIASEGAQYLSEALKVNNTLTKLNIRSNNIA 454

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL-HLNGNYGG--A 316
            EGA+ ++E LK N+ L  L++NNN                N+ I++L  LN  Y    +
Sbjct: 455 SEGAQYLSEALKVNNTLTELDINNN---------------NNARIKTLTKLNIGYNNVDS 499

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            GA  L++ L+ N +L +L +  N I  EG + L   L      L  LDI  N+I ++GA
Sbjct: 500 EGAQYLSEALKVNNTLTKLDIRSNKIESEGAQYLSEALKV-NNTLTKLDISYNNIDSEGA 558

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            +++E +K   +L  +++  N+I  EG + +++ALK N T+T +++  NNI S+GA  ++
Sbjct: 559 QYLSEALKVNNTLTKLDIGYNNIASEGVQYLSEALKVNNTLTKLNIRRNNIDSEGAQYLS 618

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKA 462
             LK N+ +T L+++ N I ++  +A
Sbjct: 619 EALKVNNTLTKLNISGNAIPSEDIRA 644



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 137/284 (48%), Gaps = 48/284 (16%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +++   N   EG  +L+E+L  N T  +++  +N I + G +     L+ N  L  
Sbjct: 414 TLTKLNIRYNNIASEGAQYLSEALKVNNTLTKLNIRSNNIASEGAQYLSEALKVNNTLTE 473

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVE---RLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L+++ N               +NA ++   +L +   ++  EGA+ ++E LK N+ L  L
Sbjct: 474 LDINNN---------------NNARIKTLTKLNIGYNNVDSEGAQYLSEALKVNNTLTKL 518

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++ +N I+  G   L+EAL  N+T+  L ++ N   + GA  L++ L+ N +L +L +  
Sbjct: 519 DIRSNKIESEGAQYLSEALKVNNTLTKLDISYNNIDSEGAQYLSEALKVNNTLTKLDIGY 578

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N+I  EG++ L   L             NN+++                   +N+  N+I
Sbjct: 579 NNIASEGVQYLSEALKV-----------NNTLTK------------------LNIRRNNI 609

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA-IARVLKDN 442
             EGA+ +++ALK N T+T +++ GN I S+   A I   LK N
Sbjct: 610 DSEGAQYLSEALKVNNTLTKLNISGNAIPSEDIRAKIHPYLKRN 653



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 102/182 (56%), Gaps = 15/182 (8%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           ++L   +I S+GA  ++  LK N+ +T LD+        G + LSE LK +  +  L +G
Sbjct: 304 MNLSLKSISSEGAQYLSEALKVNNTLTELDIR------KGVQYLSEALKVNNTLTKLNIG 357

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS-------FKVVNEALTS 532
              I + GA+++++ L+ NNT++ LD+R+N +  EG + L +S        + VN  LT 
Sbjct: 358 DNNIESEGAQYLSEALKVNNTLTKLDIRSNKIALEGVQYLXRSAIFNFEAIEKVNNTLTK 417

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKE 592
           +++ +N I  +GA  +++ALK N    +T LN+ +N +   G   L++A  +   ++E +
Sbjct: 418 LNIRYNNIASEGAQYLSEALKVNN--TLTKLNIRSNNIASEGAQYLSEALKVNNTLTELD 475

Query: 593 VN 594
           +N
Sbjct: 476 IN 477



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           + K+  E  Q L+E  K     + +D+S  N   EG  +L+E+L  N T  ++    N I
Sbjct: 522 SNKIESEGAQYLSEALKVNNTLTKLDISYNNIDSEGAQYLSEALKVNNTLTKLDIGYNNI 581

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
            + G++     L+ N  L  LN+  N I  EG + L + L  N  + +L +S   +  E 
Sbjct: 582 ASEGVQYLSEALKVNNTLTKLNIRRNNIDSEGAQYLSEALKVNNTLTKLNISGNAIPSED 641

Query: 263 AKA-IAELLKNN 273
            +A I   LK N
Sbjct: 642 IRAKIHPYLKRN 653


>gi|406943965|gb|EKD75840.1| hypothetical protein ACD_44C00009G0001 [uncultured bacterium]
          Length = 773

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 255/544 (46%), Gaps = 54/544 (9%)

Query: 101 ATFVLW--KLVEKLLMPKPSRPSKPTAEGMNW--------SVGAGTNLLSGFTGKLFRES 150
           A F+ W   + +  L    +   + + EG++W        +   G+ +++ F        
Sbjct: 197 ALFIQWLYDIRQAYLSESTATIDQLSEEGLSWVEETSSKVAASGGSEIVNDFVINSSDSH 256

Query: 151 KQTLNEFAKELRAFSSV-----DMSGRNFGD----EGLFFLAESLGYNQTAEEVSFAANG 201
            Q+     K     S +      M+  NF +    E +  ++++L  N T + ++  +N 
Sbjct: 257 AQSNQRRTKNFSDLSVILEENSSMTELNFYNGLDVEAVRLISQALERNNTIQVLNLVSNH 316

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRD 260
           +   G  A   + + N  +  LN++ N I DEG + + +IL  +N  + +L L+   + D
Sbjct: 317 MGNVGAMALARLFEFNHTITELNINNNQISDEGAQVIAEILSRNNCAITKLSLAVNLIGD 376

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG----- 315
           EGA A A LL+NN+ L  L+L++N I   G   +A A ++N+T+R+L    N  G     
Sbjct: 377 EGAIACASLLENNTSLTRLDLSSNRIGVLGAGPVARAFIKNNTLRTLIFTRNNAGPRTAE 436

Query: 316 ----AL-------------------GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
               AL                   GA  L K L  N S++ L+L  N IG EG+  L  
Sbjct: 437 IFAEALVVNLSLESLDLRENQLDREGAVVLGKKLNLNISVKRLNLGWNGIGSEGVAGLAE 496

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
                   +  L++ NN I  +G   +   ++   SL+ +++  N++GD+  + +A  + 
Sbjct: 497 AFY-ENACIQELNLQNNGIEVEGGIPLFRALEANTSLVVLDISHNELGDDDIKILAPVIS 555

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           +N ++ T++   N I ++GA A+A+ L  NS +T L L  N IG  G KAL++ L+ + +
Sbjct: 556 KNSSLKTLEFCSNAITAQGARALAKALVVNSSVTELGLGVNNIGDRGTKALAKALRQNTS 615

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           +  L L   ++G  GA+ +   L  N T++ L L  N L  +GAK L ++ +  N +LTS
Sbjct: 616 LKILTLEASEVGDGGAQVLGKALLCNCTLTTLRLNKNNLSKQGAKSLIKALE-HNASLTS 674

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA---NNFLTKFGQSALTDAKDLVYEMS 589
           ++LA N + D G  A  + L  N  +    L+LA     +L +  Q    +A   V  MS
Sbjct: 675 LELAKNNLGDIGN-AFIRLLGRNHTLTTLELSLAFVDRPYLKRISQLLERNASFQVQAMS 733

Query: 590 EKEV 593
              V
Sbjct: 734 PANV 737



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 166/327 (50%), Gaps = 6/327 (1%)

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +L+ NS +  L   N + D      +++AL  N+TI+ L+L  N+ G +GA ALA+  E 
Sbjct: 273 ILEENSSMTELNFYNGL-DVEAVRLISQALERNNTIQVLNLVSNHMGNVGAMALARLFEF 331

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N ++ EL+++ N I DEG + +   LS     +  L +  N I  +GA   A  ++N  S
Sbjct: 332 NHTITELNINNNQISDEGAQVIAEILSRNNCAITKLSLAVNLIGDEGAIACASLLENNTS 391

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  ++L  N IG  GA  +A A  +N T+ T+    NN   + A   A  L  N  + SL
Sbjct: 392 LTRLDLSSNRIGVLGAGPVARAFIKNNTLRTLIFTRNNAGPRTAEIFAEALVVNLSLESL 451

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           DL  N +  +GA  L + L  + ++  L LGW  IG+ G   +A+    N  I  L+L+ 
Sbjct: 452 DLRENQLDREGAVVLGKKLNLNISVKRLNLGWNGIGSEGVAGLAEAFYENACIQELNLQN 511

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           NG+  EG   L ++ +  N +L  +D++ NE+ DD    +A  +  N   ++ +L   +N
Sbjct: 512 NGIEVEGGIPLFRALE-ANTSLVVLDISHNELGDDDIKILAPVISKNS--SLKTLEFCSN 568

Query: 569 FLTKFGQSALTDAKDLVYEMSEKEVNI 595
            +T  G  AL  AK LV   S  E+ +
Sbjct: 569 AITAQGARAL--AKALVVNSSVTELGL 593


>gi|320165903|gb|EFW42802.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1209

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 223/454 (49%), Gaps = 47/454 (10%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LKT 222
            S++DMS    GD G   +A+ L       E+    N IT  G ++    L++  A L  
Sbjct: 305 LSTLDMSSNMIGDAGAHAIADGLLTLPALTELKLEKNQITDMGAQSIAVALRNKKAQLFR 364

Query: 223 LNLSGNPIGDEGVKCL---------------CDILVD---------NAGVERL------- 251
           L L+ N IGD G + +               C +  D         N G + +       
Sbjct: 365 LCLNWNKIGDFGARAIAEGVAVSTALASLEYCSLAFDLWMNNNQIGNVGAQAIGSALSNL 424

Query: 252 -QLSSVDLR-----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             LS +DL      D GA+AIAE L+  + L    +NNN I  +G  ++  AL   + + 
Sbjct: 425 VNLSFLDLSYNKIGDVGARAIAEGLQALTALTKFRMNNNQIGDAGAQAIGSALRNKANLS 484

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           +L    N  G  GA A+A+GL+ +K+L EL +  N IGD G +A+ + L + K  L  L 
Sbjct: 485 TLE---NKIGDAGARAIAEGLQTSKALTELVMSSNQIGDAGAKAIGTALRN-KANLTNLC 540

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I   GA  +AE +K  K+L  + +Y N IGD GA+ I  AL+    +  +DLG N
Sbjct: 541 LHENKIGDAGARAIAEGLKTSKALTELGMYANQIGDAGAQAIGSALRNKAKLCLLDLGEN 600

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   GA AIA  L+ ++ +T   +  N IG  GA+A+   L+   +++++ LG  +IG 
Sbjct: 601 KIGDTGACAIAEGLQGSTALTDFRMNNNQIGNAGAQAIGSALRNKADLSSVHLGSNKIGD 660

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA-LTSIDLAFNEIRDDG 544
           +GA  +A+ L+   ++  L + AN + D GA+ +  + +  N+A L+ + +  N I D G
Sbjct: 661 AGACAIAEGLQTTTSLIQLWMHANQIGDVGAQAIGSALR--NKANLSVLLMGSNRIGDAG 718

Query: 545 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           A AIA+ L+ +   A+T   +  N +   G  A+
Sbjct: 719 ARAIAEGLQTS--TALTHFKMHVNQIGDTGALAI 750



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 191/356 (53%), Gaps = 7/356 (1%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N I   G +A    LQ+  AL    ++ N IGD G + +   L + A +  L+     + 
Sbjct: 435 NKIGDVGARAIAEGLQALTALTKFRMNNNQIGDAGAQAIGSALRNKANLSTLE---NKIG 491

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+AIAE L+ +  L  L +++N I  +G  ++  AL   + + +L L+ N  G  GA
Sbjct: 492 DAGARAIAEGLQTSKALTELVMSSNQIGDAGAKAIGTALRNKANLTNLCLHENKIGDAGA 551

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+A+GL+ +K+L EL ++ N IGD G +A+ S L + K KL +LD+G N I   GA  +
Sbjct: 552 RAIAEGLKTSKALTELGMYANQIGDAGAQAIGSALRN-KAKLCLLDLGENKIGDTGACAI 610

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE ++   +L    +  N IG+ GA+ I  AL+    ++++ LG N I   GA AIA  L
Sbjct: 611 AEGLQGSTALTDFRMNNNQIGNAGAQAIGSALRNKADLSSVHLGSNKIGDAGACAIAEGL 670

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           +  + +  L +  N IG  GA+A+   L+   N++ L +G  +IG +GA  +A+ L+ + 
Sbjct: 671 QTTTSLIQLWMHANQIGDVGAQAIGSALRNKANLSVLLMGSNRIGDAGARAIAEGLQTST 730

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSI-DLAFNEIRDDGAFAIAQALKA 554
            ++   +  N + D GA  +  S +  N+ L +I  L+ N+I       ++Q++ A
Sbjct: 731 ALTHFKMHVNQIGDTGALAIESSLR--NKPLLAILHLSRNQISASAVQRLSQSVPA 784



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 212/427 (49%), Gaps = 17/427 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S++ +     GD G   +AE +  +    E+    N I  AG +A    L++   L  L
Sbjct: 193 LSTLYLDENKIGDAGARAIAEGVQGSTALTELRMHRNQIGDAGAQAIGPALRNKSKLLRL 252

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N IGD G + + + L  +  +  L +SS  + D GA+ I   L+N   L  L++++
Sbjct: 253 HLELNHIGDTGARAIAEGLHASTALTDLSMSSNQIGDAGAQPIGYALRNKENLSTLDMSS 312

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSI 342
           NMI  +G  ++A+ LL    +  L L  N    +GA ++A  L   K+ L  L L+ N I
Sbjct: 313 NMIGDAGAHAIADGLLTLPALTELKLEKNQITDMGAQSIAVALRNKKAQLFRLCLNWNKI 372

Query: 343 GDEGIRALMSGLSSRKGKLAVLD---------IGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           GD G RA+  G++     LA L+         + NN I   GA  +   + N  +L +++
Sbjct: 373 GDFGARAIAEGVAVSTA-LASLEYCSLAFDLWMNNNQIGNVGAQAIGSALSNLVNLSFLD 431

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IGD GA  IA+ L+    +T   +  N I   GA AI   L++ + +++L+   N
Sbjct: 432 LSYNKIGDVGARAIAEGLQALTALTKFRMNNNQIGDAGAQAIGSALRNKANLSTLE---N 488

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A++E L+    +  L +   QIG +GA+ +   LR    ++ L L  N + D
Sbjct: 489 KIGDAGARAIAEGLQTSKALTELVMSSNQIGDAGAKAIGTALRNKANLTNLCLHENKIGD 548

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA+ +A+  K  ++ALT + +  N+I D GA AI  AL+    + +  L+L  N +   
Sbjct: 549 AGARAIAEGLK-TSKALTELGMYANQIGDAGAQAIGSALRNKAKLCL--LDLGENKIGDT 605

Query: 574 GQSALTD 580
           G  A+ +
Sbjct: 606 GACAIAE 612



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 133/431 (30%), Positives = 216/431 (50%), Gaps = 17/431 (3%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A +S +M     GD G   +  +L        +    N I A G  A    LQ++ AL  
Sbjct: 51  ALASFEMQANKIGDAGAQAIGSALRNKAKLSVLYLEENKIGAVGASAIAAGLQTSSALTE 110

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSILRVLEL 281
           L +  N I D G + +   L + A +  L LS   + D GA+AI E L   +++L  L +
Sbjct: 111 LRMENNQISDAGAQAIGSALRNKANLSILSLSENMIGDAGARAIGEGLQTTSTLLTTLWM 170

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N I  +G  ++  AL   + + +L+L+ N  G  GA A+A+G++G+ +L EL +H N 
Sbjct: 171 DKNQIGDAGAQAIGSALRNKANLSTLYLDENKIGDAGARAIAEGVQGSTALTELRMHRNQ 230

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD G +A+   L + K KL  L +  N I   GA  +AE +    +L  +++  N IGD
Sbjct: 231 IGDAGAQAIGPALRN-KSKLLRLHLELNHIGDTGARAIAEGLHASTALTDLSMSSNQIGD 289

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA+ I  AL+    ++T+D+  N I   GA AIA  L     +T L L  N I   GA+
Sbjct: 290 AGAQPIGYALRNKENLSTLDMSSNMIGDAGAHAIADGLLTLPALTELKLEKNQITDMGAQ 349

Query: 462 ALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD---------LRANGL 511
           +++  L+     +  L L W +IG  GA  +A+ +  +  ++ L+         +  N +
Sbjct: 350 SIAVALRNKKAQLFRLCLNWNKIGDFGARAIAEGVAVSTALASLEYCSLAFDLWMNNNQI 409

Query: 512 RDEGAKCLAQSFK-VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
            + GA+ +  +   +VN  L+ +DL++N+I D GA AIA+ L+A    A+T   + NN +
Sbjct: 410 GNVGAQAIGSALSNLVN--LSFLDLSYNKIGDVGARAIAEGLQA--LTALTKFRMNNNQI 465

Query: 571 TKFGQSALTDA 581
              G  A+  A
Sbjct: 466 GDAGAQAIGSA 476



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 132/423 (31%), Positives = 213/423 (50%), Gaps = 17/423 (4%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M     GD G   +  +L        +    N I  AG +A    +Q + AL  L +  N
Sbjct: 170 MDKNQIGDAGAQAIGSALRNKANLSTLYLDENKIGDAGARAIAEGVQGSTALTELRMHRN 229

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + +   L + + + RL L    + D GA+AIAE L  ++ L  L +++N I  
Sbjct: 230 QIGDAGAQAIGPALRNKSKLLRLHLELNHIGDTGARAIAEGLHASTALTDLSMSSNQIGD 289

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G   +  AL     + +L ++ N  G  GA+A+A GL    +L EL L  N I D G +
Sbjct: 290 AGAQPIGYALRNKENLSTLDMSSNMIGDAGAHAIADGLLTLPALTELKLEKNQITDMGAQ 349

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL-------LWINLYMND--I 399
           ++   L ++K +L  L +  N I   GA  +AE +    +L       L  +L+MN+  I
Sbjct: 350 SIAVALRNKKAQLFRLCLNWNKIGDFGARAIAEGVAVSTALASLEYCSLAFDLWMNNNQI 409

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G+ GA+ I  AL     ++ +DL  N I   GA AIA  L+  + +T   +  N IG  G
Sbjct: 410 GNVGAQAIGSALSNLVNLSFLDLSYNKIGDVGARAIAEGLQALTALTKFRMNNNQIGDAG 469

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           A+A+   L+   N++TL+    +IG +GA  +A+ L+ +  ++ L + +N + D GAK +
Sbjct: 470 AQAIGSALRNKANLSTLE---NKIGDAGARAIAEGLQTSKALTELVMSSNQIGDAGAKAI 526

Query: 520 AQSFKVVNEA-LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
             + +  N+A LT++ L  N+I D GA AIA+ LK ++  A+T L +  N +   G  A+
Sbjct: 527 GTALR--NKANLTNLCLHENKIGDAGARAIAEGLKTSK--ALTELGMYANQIGDAGAQAI 582

Query: 579 TDA 581
             A
Sbjct: 583 GSA 585



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 184/381 (48%), Gaps = 2/381 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N I   G +A    L++   L  L L  N IGD G + + + L     +   ++ +  + 
Sbjct: 4   NHIGDTGARAIGLALRNKTRLTMLCLGMNDIGDVGARAIAEGLQAATALASFEMQANKIG 63

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+AI   L+N + L VL L  N I   G +++A  L  +S +  L +  N     GA
Sbjct: 64  DAGAQAIGSALRNKAKLSVLYLEENKIGAVGASAIAAGLQTSSALTELRMENNQISDAGA 123

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+   L    +L  L L  N IGD G RA+  GL +    L  L +  N I   GA  +
Sbjct: 124 QAIGSALRNKANLSILSLSENMIGDAGARAIGEGLQTTSTLLTTLWMDKNQIGDAGAQAI 183

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
              ++N  +L  + L  N IGD GA  IA+ ++ +  +T + +  N I   GA AI   L
Sbjct: 184 GSALRNKANLSTLYLDENKIGDAGARAIAEGVQGSTALTELRMHRNQIGDAGAQAIGPAL 243

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           ++ S +  L L  N IG  GA+A++E L     +  L +   QIG +GA+ +   LR   
Sbjct: 244 RNKSKLLRLHLELNHIGDTGARAIAEGLHASTALTDLSMSSNQIGDAGAQPIGYALRNKE 303

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
            +S LD+ +N + D GA  +A     +  ALT + L  N+I D GA +IA AL+ N+   
Sbjct: 304 NLSTLDMSSNMIGDAGAHAIADGLLTL-PALTELKLEKNQITDMGAQSIAVALR-NKKAQ 361

Query: 560 VTSLNLANNFLTKFGQSALTD 580
           +  L L  N +  FG  A+ +
Sbjct: 362 LFRLCLNWNKIGDFGARAIAE 382



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 189/388 (48%), Gaps = 2/388 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GD G   +  +L        +    N I   G +A    LQ+  AL +  +  N IGD
Sbjct: 5   HIGDTGARAIGLALRNKTRLTMLCLGMNDIGDVGARAIAEGLQAATALASFEMQANKIGD 64

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + +   L + A +  L L    +   GA AIA  L+ +S L  L + NN I  +G  
Sbjct: 65  AGAQAIGSALRNKAKLSVLYLEENKIGAVGASAIAAGLQTSSALTELRMENNQISDAGAQ 124

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH-LHGNSIGDEGIRALM 351
           ++  AL   + +  L L+ N  G  GA A+ +GL+   +L     +  N IGD G +A+ 
Sbjct: 125 AIGSALRNKANLSILSLSENMIGDAGARAIGEGLQTTSTLLTTLWMDKNQIGDAGAQAIG 184

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
           S L + K  L+ L +  N I   GA  +AE ++   +L  + ++ N IGD GA+ I  AL
Sbjct: 185 SALRN-KANLSTLYLDENKIGDAGARAIAEGVQGSTALTELRMHRNQIGDAGAQAIGPAL 243

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           +    +  + L  N+I   GA AIA  L  ++ +T L ++ N IG  GA+ +   L+   
Sbjct: 244 RNKSKLLRLHLELNHIGDTGARAIAEGLHASTALTDLSMSSNQIGDAGAQPIGYALRNKE 303

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALT 531
           N++TL +    IG +GA  +AD L     ++ L L  N + D GA+ +A + +     L 
Sbjct: 304 NLSTLDMSSNMIGDAGAHAIADGLLTLPALTELKLEKNQITDMGAQSIAVALRNKKAQLF 363

Query: 532 SIDLAFNEIRDDGAFAIAQALKANEDVA 559
            + L +N+I D GA AIA+ +  +  +A
Sbjct: 364 RLCLNWNKIGDFGARAIAEGVAVSTALA 391



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 149/300 (49%), Gaps = 4/300 (1%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           LS    K+     + + E  +  +A + + MS    GD G   +  +L        +   
Sbjct: 483 LSTLENKIGDAGARAIAEGLQTSKALTELVMSSNQIGDAGAKAIGTALRNKANLTNLCLH 542

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I  AG +A    L+++ AL  L +  N IGD G + +   L + A +  L L    +
Sbjct: 543 ENKIGDAGARAIAEGLKTSKALTELGMYANQIGDAGAQAIGSALRNKAKLCLLDLGENKI 602

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            D GA AIAE L+ ++ L    +NNN I  +G  ++  AL   + + S+HL  N  G  G
Sbjct: 603 GDTGACAIAEGLQGSTALTDFRMNNNQIGNAGAQAIGSALRNKADLSSVHLGSNKIGDAG 662

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A A+A+GL+   SL +L +H N IGD G +A+ S L + K  L+VL +G+N I   GA  
Sbjct: 663 ACAIAEGLQTTTSLIQLWMHANQIGDVGAQAIGSALRN-KANLSVLLMGSNRIGDAGARA 721

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE ++   +L    +++N IGD GA  I  +L+    +  + L  N I    ASA+ R+
Sbjct: 722 IAEGLQTSTALTHFKMHVNQIGDTGALAIESSLRNKPLLAILHLSRNQIS---ASAVQRL 778



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 144/316 (45%), Gaps = 29/316 (9%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE L  ++   E+  ++N I  AG KA    L++   L  L L  N IGD 
Sbjct: 490 IGDAGARAIAEGLQTSKALTELVMSSNQIGDAGAKAIGTALRNKANLTNLCLHENKIGDA 549

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  +  +  L + +  + D GA+AI   L+N + L +L+L  N I  +G  +
Sbjct: 550 GARAIAEGLKTSKALTELGMYANQIGDAGAQAIGSALRNKAKLCLLDLGENKIGDTGACA 609

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AE L  ++ +    +N N  G  GA A+   L     L  +HL  N IGD         
Sbjct: 610 IAEGLQGSTALTDFRMNNNQIGNAGAQAIGSALRNKADLSSVHLGSNKIGD--------- 660

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
                                GA  +AE ++   SL+ + ++ N IGD GA+ I  AL+ 
Sbjct: 661 --------------------AGACAIAEGLQTTTSLIQLWMHANQIGDVGAQAIGSALRN 700

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
              ++ + +G N I   GA AIA  L+ ++ +T   +  N IG  GA A+   L+    +
Sbjct: 701 KANLSVLLMGSNRIGDAGARAIAEGLQTSTALTHFKMHVNQIGDTGALAIESSLRNKPLL 760

Query: 474 NTLKLGWCQIGASGAE 489
             L L   QI AS  +
Sbjct: 761 AILHLSRNQISASAVQ 776



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 3/158 (1%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           + +N IGD GA  I  AL+    +T + LG N+I   GA AIA  L+  + + S ++  N
Sbjct: 1   MIINHIGDTGARAIGLALRNKTRLTMLCLGMNDIGDVGARAIAEGLQAATALASFEMQAN 60

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A+   L+    ++ L L   +IGA GA  +A  L+ ++ ++ L +  N + D
Sbjct: 61  KIGDAGAQAIGSALRNKAKLSVLYLEENKIGAVGASAIAAGLQTSSALTELRMENNQISD 120

Query: 514 EGAKCLAQSFKVVNEA-LTSIDLAFNEIRDDGAFAIAQ 550
            GA+ +  + +  N+A L+ + L+ N I D GA AI +
Sbjct: 121 AGAQAIGSALR--NKANLSILSLSENMIGDAGARAIGE 156



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 62/135 (45%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            SSV +     GD G   +AE L    +  ++   AN I   G +A    L++   L  L
Sbjct: 648 LSSVHLGSNKIGDAGACAIAEGLQTTTSLIQLWMHANQIGDVGAQAIGSALRNKANLSVL 707

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +  N IGD G + + + L  +  +   ++    + D GA AI   L+N  +L +L L+ 
Sbjct: 708 LMGSNRIGDAGARAIAEGLQTSTALTHFKMHVNQIGDTGALAIESSLRNKPLLAILHLSR 767

Query: 284 NMIDYSGFTSLAEAL 298
           N I  S    L++++
Sbjct: 768 NQISASAVQRLSQSV 782


>gi|320168023|gb|EFW44922.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 487

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 151/256 (58%), Gaps = 1/256 (0%)

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           LK N  +  L L NN ID +   ++AEAL    T+  L+L+ N  G  GA A+A+ L+GN
Sbjct: 44  LKVNKTVTALWLKNNQIDDAAANTIAEALKVTKTLSELYLSHNQIGHAGAQAIAEALKGN 103

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K++ EL+++GN IGD G   +++ +         L + NN     GA  +AE +K  K+L
Sbjct: 104 KTVTELNMNGNQIGD-GEAQVIAEMLKVNTTPTTLKLANNHFGCAGARAIAEALKMNKTL 162

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           + + L  N IGD GA+ IA+AL+ N+T+T + L  N I   GA AIA  L+ N  ++ L+
Sbjct: 163 IELVLGGNQIGDAGAQAIAEALRVNKTLTRLGLDKNQIGDAGAKAIAEALQVNKTLSWLN 222

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L  N IG  GA+A++E LK +  + TL L W +I  +GA+ +A  L+ N T+  LDLR+N
Sbjct: 223 LIDNQIGDAGAQAIAEALKGNMPVQTLYLDWNRIDDAGAQEIAGALKVNTTLKWLDLRSN 282

Query: 510 GLRDEGAKCLAQSFKV 525
            + + G + + ++ +V
Sbjct: 283 CIGNAGLQAIREASQV 298



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/270 (37%), Positives = 139/270 (51%), Gaps = 5/270 (1%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  +  L L  N I D     + + L     +  L LS   +   GA+AIAE LK N
Sbjct: 44  LKVNKTVTALWLKNNQIDDAAANTIAEALKVTKTLSELYLSHNQIGHAGAQAIAEALKGN 103

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             +  L +N N I       +AE L  N+T  +L L  N+ G  GA A+A+ L+ NK+L 
Sbjct: 104 KTVTELNMNGNQIGDGEAQVIAEMLKVNTTPTTLKLANNHFGCAGARAIAEALKMNKTLI 163

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L GN IGD G +A+   L   K  L  L +  N I   GA  +AE ++  K+L W+N
Sbjct: 164 ELVLGGNQIGDAGAQAIAEALRVNK-TLTRLGLDKNQIGDAGAKAIAEALQVNKTLSWLN 222

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IGD GA+ IA+ALK N  + T+ L  N I   GA  IA  LK N+ +  LDL  N
Sbjct: 223 LIDNQIGDAGAQAIAEALKGNMPVQTLYLDWNRIDDAGAQEIAGALKVNTTLKWLDLRSN 282

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            IG  G +A+ E  + +  ++ L    CQI
Sbjct: 283 CIGNAGLQAIREASQVNRTLSNL----CQI 308



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 134/230 (58%), Gaps = 2/230 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L+ N I +   +A+   L   K  +  L + NN I    A  +AE +K  K+L  + L
Sbjct: 25  LDLYDNQIDEAEAQAIAEALKVNK-TVTALWLKNNQIDDAAANTIAEALKVTKTLSELYL 83

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N IG  GA+ IA+ALK N+T+T +++ GN I    A  IA +LK N+  T+L LA N 
Sbjct: 84  SHNQIGHAGAQAIAEALKGNKTVTELNMNGNQIGDGEAQVIAEMLKVNTTPTTLKLANNH 143

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            G  GA+A++E LK +  +  L LG  QIG +GA+ +A+ LR N T++ L L  N + D 
Sbjct: 144 FGCAGARAIAEALKMNKTLIELVLGGNQIGDAGAQAIAEALRVNKTLTRLGLDKNQIGDA 203

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           GAK +A++ + VN+ L+ ++L  N+I D GA AIA+ALK N  V    L+
Sbjct: 204 GAKAIAEALQ-VNKTLSWLNLIDNQIGDAGAQAIAEALKGNMPVQTLYLD 252



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 154/305 (50%), Gaps = 10/305 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +++ +      D     +AE+L   +T  E+  + N I  AG +A    L+ N  + 
Sbjct: 48  KTVTALWLKNNQIDDAAANTIAEALKVTKTLSELYLSHNQIGHAGAQAIAEALKGNKTVT 107

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LN++GN IGD   + + ++L  N     L+L++      GA+AIAE LK N  L  L L
Sbjct: 108 ELNMNGNQIGDGEAQVIAEMLKVNTTPTTLKLANNHFGCAGARAIAEALKMNKTLIELVL 167

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I  +G  ++AEAL  N T+  L L+ N  G  GA A+A+ L+ NK+L  L+L  N 
Sbjct: 168 GGNQIGDAGAQAIAEALRVNKTLTRLGLDKNQIGDAGAKAIAEALQVNKTLSWLNLIDNQ 227

Query: 342 IGDEGIRALMSGLSSRKGKLAV--LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           IGD G +A+   L   KG + V  L +  N I   GA  +A  +K   +L W++L  N I
Sbjct: 228 IGDAGAQAIAEAL---KGNMPVQTLYLDWNRIDDAGAQEIAGALKVNTTLKWLDLRSNCI 284

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD-LAYNPIGAD 458
           G+ G + I +A + NRT++ +      I+    S + R+   + + T L  L   P+  D
Sbjct: 285 GNAGLQAIREASQVNRTLSNL----CQINPLAFSLLPRLATADDLQTVLHLLTCEPVLED 340

Query: 459 GAKAL 463
            A +L
Sbjct: 341 QATSL 345



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 103/199 (51%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  +  + ++M+G   GD     +AE L  N T   +  A N    AG +A  
Sbjct: 94  QAIAEALKGNKTVTELNMNGNQIGDGEAQVIAEMLKVNTTPTTLKLANNHFGCAGARAIA 153

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L L GN IGD G + + + L  N  + RL L    + D GAKAIAE L+
Sbjct: 154 EALKMNKTLIELVLGGNQIGDAGAQAIAEALRVNKTLTRLGLDKNQIGDAGAKAIAEALQ 213

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L +N I  +G  ++AEAL  N  +++L+L+ N     GA  +A  L+ N +
Sbjct: 214 VNKTLSWLNLIDNQIGDAGAQAIAEALKGNMPVQTLYLDWNRIDDAGAQEIAGALKVNTT 273

Query: 332 LRELHLHGNSIGDEGIRAL 350
           L+ L L  N IG+ G++A+
Sbjct: 274 LKWLDLRSNCIGNAGLQAI 292



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 3/191 (1%)

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           W++LY N I +  A+ IA+ALK N+T+T + L  N I    A+ IA  LK    ++ L L
Sbjct: 24  WLDLYDNQIDEAEAQAIAEALKVNKTVTALWLKNNQIDDAAANTIAEALKVTKTLSELYL 83

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           ++N IG  GA+A++E LK +  +  L +   QIG   A+ +A+ML+ N T + L L  N 
Sbjct: 84  SHNQIGHAGAQAIAEALKGNKTVTELNMNGNQIGDGEAQVIAEMLKVNTTPTTLKLANNH 143

Query: 511 LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
               GA+ +A++ K +N+ L  + L  N+I D GA AIA+AL+ N+   +T L L  N +
Sbjct: 144 FGCAGARAIAEALK-MNKTLIELVLGGNQIGDAGAQAIAEALRVNK--TLTRLGLDKNQI 200

Query: 571 TKFGQSALTDA 581
              G  A+ +A
Sbjct: 201 GDAGAKAIAEA 211


>gi|218675766|gb|AAI69297.2| NOD3 protein [synthetic construct]
          Length = 311

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/303 (37%), Positives = 169/303 (55%), Gaps = 4/303 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L  N I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ N+ L  L L 
Sbjct: 1   LHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQ 60

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            NSI D G+ ALM  L + +  L+ L +  NSIS +GA  +A  +    +L  ++L  N 
Sbjct: 61  SNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALCANSTLKNLDLTANL 119

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + D+GA  IA A+++NRT+T++ L  N I +  A A+ + L+ N  +TSLDL  N IG D
Sbjct: 120 LHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDD 179

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA A++  LK +  +  L L    IGASGA+ + + L  N T+ ILDLR N +   GAK 
Sbjct: 180 GACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKA 239

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           LA + K VN +L  ++L  N +  DGA  IA AL  N    +  +NL  N +   G   +
Sbjct: 240 LANALK-VNSSLRRLNLQENSLGMDGAICIATALSGNHR--LQHINLQGNHIGDSGARMI 296

Query: 579 TDA 581
           ++A
Sbjct: 297 SEA 299



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 162/325 (49%), Gaps = 29/325 (8%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G  G   +A++L  N++ +E+ F++N I   G KA    L+ N  L++L+L  N I D 
Sbjct: 8   IGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDA 67

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           GV  L   L  N  +  L L    +  EGA+AIA  L  NS L+ L+L  N++   G  +
Sbjct: 68  GVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARA 127

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A A+ EN T+ SLHL  N+  A  A AL + L+ N+SL  L L  N+IGD+        
Sbjct: 128 IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDD-------- 179

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
                                GA  VA  +K   +L  + L +  IG  GA+ + +AL  
Sbjct: 180 ---------------------GACAVARALKVNTALTALYLQVASIGASGAQVLGEALAV 218

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G DGA  ++  L  +  +
Sbjct: 219 NRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRL 278

Query: 474 NTLKLGWCQIGASGAEFVADMLRYN 498
             + L    IG SGA  +++ ++ N
Sbjct: 279 QHINLQGNHIGDSGARMISEAIKTN 303



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 158/303 (52%), Gaps = 1/303 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  N IG  G + + D L  N  ++ L  SS  + D GAKA+AE LK N  L  L+L 
Sbjct: 1   LHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQ 60

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I  +G  +L  AL  N T+ SL L  N     GA A+A  L  N +L+ L L  N +
Sbjct: 61  SNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLL 120

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            D+G RA+   +   +  L  L +  N I A  A  + + ++  +SL  ++L  N IGD+
Sbjct: 121 HDQGARAIAVAVRENR-TLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDD 179

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  +A ALK N  +T + L   +I + GA  +   L  N  +  LDL  N IG  GAKA
Sbjct: 180 GACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKA 239

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           L+  LK + ++  L L    +G  GA  +A  L  N+ +  ++L+ N + D GA+ ++++
Sbjct: 240 LANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEA 299

Query: 523 FKV 525
            K 
Sbjct: 300 IKT 302



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 157/299 (52%), Gaps = 1/299 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + +  K+ R+   +  S  + GD G   LAE+L  NQ  E +   +N I+ AG+ A  
Sbjct: 14  QRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALM 73

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           G L +N  L +L+L  N I  EG + +   L  N+ ++ L L++  L D+GA+AIA  ++
Sbjct: 74  GALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVR 133

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L  N I      +L +AL  N ++ SL L  N  G  GA A+A+ L+ N +
Sbjct: 134 ENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTA 193

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L+L   SIG  G + L   L+  +  L +LD+  N+I   GA  +A  +K   SL  
Sbjct: 194 LTALYLQVASIGASGAQVLGEALAVNR-TLEILDLRGNAIGVAGAKALANALKVNSSLRR 252

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           +NL  N +G +GA  IA AL  N  +  I+L GN+I   GA  I+  +K N+   ++++
Sbjct: 253 LNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 311


>gi|403349288|gb|EJY74083.1| Leucine rich repeat containing proteins-like protein [Oxytricha
           trifallax]
 gi|403355535|gb|EJY77346.1| Leucine rich repeat containing proteins-like protein [Oxytricha
           trifallax]
 gi|403358592|gb|EJY78952.1| Leucine rich repeat containing proteins-like protein [Oxytricha
           trifallax]
          Length = 999

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 220/447 (49%), Gaps = 33/447 (7%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +  KELR   +VD+      D  + F+ ++L  +     +    N IT AG +     L+
Sbjct: 93  KMKKELR---TVDLGENRITDASIGFIGDALRTHVRLHMLFLDNNKITDAGAEGLAECLK 149

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +   L+ LN+  N IG EG + L   L  N G+ +L   S  + +EGA AIAE ++    
Sbjct: 150 NKQDLRILNIDNNQIGPEGARKLAMQLKSNYGLSKLYCDSNRIGEEGAVAIAEAMQMMDS 209

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+ + + NN I   G  +L+  L+EN T+ SL++  N   + GA ALAK L     L +L
Sbjct: 210 LKKICIENNGIKDRGAIALSRVLMENDTLLSLYIENNQISSQGAIALAKMLRNKMKLSKL 269

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +++ N IGDEG++A+  G+S  +  L V+ I +  I+       A  +KN + L  I L 
Sbjct: 270 NMNHNPIGDEGMQAISEGISQNE-TLRVITIADAGITKNSLAVFARSLKNKRFLTKILLD 328

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL---------------- 439
            N IG EGA+ +A+ LK+N T+T + L    I  +GA A+A  L                
Sbjct: 329 SNKIGIEGAKILAEGLKENETLTNLHLSHCLILEEGAVALATALTNKRNLLVLDLNNNKI 388

Query: 440 ------------KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
                       + ++ +  L ++ N IG DGAK L++VL     I  + L    I A G
Sbjct: 389 LAGGCIAICKNIQHHTTLRELYMSNNYIGPDGAKQLAKVLVNKKYITEIWLSMNGIFAEG 448

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
           A  + + L+    + +L L+ N +  +G + L +    +++ +  ++LA N I D+GA  
Sbjct: 449 AIALGEALKDKKYLEVLVLKKNDINIQGIRALKEVLN-LSKTIKELNLASNAIGDEGASI 507

Query: 548 IAQALKANEDVAVTSLNLANNFLTKFG 574
           + +AL   ++  +  L L++N +T  G
Sbjct: 508 VCEALINKQNQQLNYLGLSDNKITTQG 534



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 135/420 (32%), Positives = 214/420 (50%), Gaps = 13/420 (3%)

Query: 157 FAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            AK LR     S ++M+    GDEG+  ++E +  N+T   ++ A  GIT   +  F   
Sbjct: 256 LAKMLRNKMKLSKLNMNHNPIGDEGMQAISEGISQNETLRVITIADAGITKNSLAVFARS 315

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++   L  + L  N IG EG K L + L +N  +  L LS   + +EGA A+A  L N 
Sbjct: 316 LKNKRFLTKILLDSNKIGIEGAKILAEGLKENETLTNLHLSHCLILEEGAVALATALTNK 375

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L VL+LNNN I   G  ++ + +  ++T+R L+++ NY G  GA  LAK L   K + 
Sbjct: 376 RNLLVLDLNNNKILAGGCIAICKNIQHHTTLRELYMSNNYIGPDGAKQLAKVLVNKKYIT 435

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E+ L  N I  EG  AL   L  +K  L VL +  N I+ +G   + E +   K++  +N
Sbjct: 436 EIWLSMNGIFAEGAIALGEALKDKK-YLEVLVLKKNDINIQGIRALKEVLNLSKTIKELN 494

Query: 394 LYMNDIGDEGAEKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           L  N IGDEGA  + +AL  KQN+ +  + L  N I ++GA  +A+++   + +T L LA
Sbjct: 495 LASNAIGDEGASIVCEALINKQNQQLNYLGLSDNKITTQGAIKVAQLISKCTTLTELYLA 554

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I  DGAKAL + +K   +   + L            +  +L  N     L+L  + L
Sbjct: 555 NNEIDNDGAKALVKAIKGRTDFKNIDLDNNLFSGEAITELFTILPLNK----LNLIKSIL 610

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            D     LA+  K +N++L+ I ++ N++ D+    +A A+  N    +T L + +N L+
Sbjct: 611 TDAQVTPLARQMK-INKSLSQIYMSHNQLSDNSVALLADAIVDNS--VLTELFITHNDLS 667



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 191/399 (47%), Gaps = 30/399 (7%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           E ++F  N      I+A    ++    L+T++L  N I D  +  + D L  +  +  L 
Sbjct: 71  EGINFRCNNFNERVIEALCQGIKMKKELRTVDLGENRITDASIGFIGDALRTHVRLHMLF 130

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L +  + D GA+ +AE LKN   LR+L ++NN I   G   LA  L  N  +  L+ + N
Sbjct: 131 LDNNKITDAGAEGLAECLKNKQDLRILNIDNNQIGPEGARKLAMQLKSNYGLSKLYCDSN 190

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G  GA A+A+ ++   SL+++ +  N I D G  AL S +      L  L I NN IS
Sbjct: 191 RIGEEGAVAIAEAMQMMDSLKKICIENNGIKDRGAIAL-SRVLMENDTLLSLYIENNQIS 249

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
           ++GA  +A+ ++N   L  +N+  N IGDEG + I++ + QN T+  I +    I     
Sbjct: 250 SQGAIALAKMLRNKMKLSKLNMNHNPIGDEGMQAISEGISQNETLRVITIADAGITKNSL 309

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
           +  AR LK+   +T + L  N IG +GAK L+E LK +  +  L L  C I   GA  +A
Sbjct: 310 AVFARSLKNKRFLTKILLDSNKIGIEGAKILAEGLKENETLTNLHLSHCLILEEGAVALA 369

Query: 493 DML----------------------------RYNNTISILDLRANGLRDEGAKCLAQSFK 524
             L                            +++ T+  L +  N +  +GAK LA+   
Sbjct: 370 TALTNKRNLLVLDLNNNKILAGGCIAICKNIQHHTTLRELYMSNNYIGPDGAKQLAKVL- 428

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           V  + +T I L+ N I  +GA A+ +ALK  + + V  L
Sbjct: 429 VNKKYITEIWLSMNGIFAEGAIALGEALKDKKYLEVLVL 467



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 212/457 (46%), Gaps = 37/457 (8%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K  +    +++     G EG   LA  L  N    ++   +N I   G  A    
Sbjct: 144 LAECLKNKQDLRILNIDNNQIGPEGARKLAMQLKSNYGLSKLYCDSNRIGEEGAVAIAEA 203

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           +Q   +LK + +  N I D G   L  +L++N  +  L + +  +  +GA A+A++L+N 
Sbjct: 204 MQMMDSLKKICIENNGIKDRGAIALSRVLMENDTLLSLYIENNQISSQGAIALAKMLRNK 263

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIR---------------------------- 305
             L  L +N+N I   G  +++E + +N T+R                            
Sbjct: 264 MKLSKLNMNHNPIGDEGMQAISEGISQNETLRVITIADAGITKNSLAVFARSLKNKRFLT 323

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            + L+ N  G  GA  LA+GL+ N++L  LHL    I +EG  AL + L++++  L +  
Sbjct: 324 KILLDSNKIGIEGAKILAEGLKENETLTNLHLSHCLILEEGAVALATALTNKRNLLVLDL 383

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
              N I A G   + + I++  +L  + +  N IG +GA+++A  L   + IT I L  N
Sbjct: 384 NN-NKILAGGCIAICKNIQHHTTLRELYMSNNYIGPDGAKQLAKVLVNKKYITEIWLSMN 442

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I ++GA A+   LKD   +  L L  N I   G +AL EVL     I  L L    IG 
Sbjct: 443 GIFAEGAIALGEALKDKKYLEVLVLKKNDINIQGIRALKEVLNLSKTIKELNLASNAIGD 502

Query: 486 SGAEFVADML--RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
            GA  V + L  + N  ++ L L  N +  +GA  +AQ        LT + LA NEI +D
Sbjct: 503 EGASIVCEALINKQNQQLNYLGLSDNKITTQGAIKVAQLISKCT-TLTELYLANNEIDND 561

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           GA A+ +A+K   D    +++L NN    F   A+T+
Sbjct: 562 GAKALVKAIKGRTD--FKNIDLDNNL---FSGEAITE 593



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 216/470 (45%), Gaps = 39/470 (8%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           + K+  E  + L E  KE    +++ +S     +EG   LA +L   +    +    N I
Sbjct: 329 SNKIGIEGAKILAEGLKENETLTNLHLSHCLILEEGAVALATALTNKRNLLVLDLNNNKI 388

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
            A G  A    +Q +  L+ L +S N IG +G K L  +LV+   +  + LS   +  EG
Sbjct: 389 LAGGCIAICKNIQHHTTLRELYMSNNYIGPDGAKQLAKVLVNKKYITEIWLSMNGIFAEG 448

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A A+ E LK+   L VL L  N I+  G  +L E L  + TI+ L+L  N  G  GA+ +
Sbjct: 449 AIALGEALKDKKYLEVLVLKKNDINIQGIRALKEVLNLSKTIKELNLASNAIGDEGASIV 508

Query: 323 AK-------------GLEGNK-----------------SLRELHLHGNSIGDEGIRALMS 352
            +             GL  NK                 +L EL+L  N I ++G +AL+ 
Sbjct: 509 CEALINKQNQQLNYLGLSDNKITTQGAIKVAQLISKCTTLTELYLANNEIDNDGAKALVK 568

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            +  R      +D+ NN  S +    +   +     L  +NL  + + D     +A  +K
Sbjct: 569 AIKGRTD-FKNIDLDNNLFSGEAITELFTIL----PLNKLNLIKSILTDAQVTPLARQMK 623

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N++++ I +  N +     + +A  + DNSV+T L + +N +       L + LK    
Sbjct: 624 INKSLSQIYMSHNQLSDNSVALLADAIVDNSVLTELFITHNDLSGTSGILLIQALKNKPG 683

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           + +L L  C++       +A+ L+ N ++  L L +N +    A+ ++Q  +     LTS
Sbjct: 684 LKSLALNSCKLNQGLLRELAESLKDNESLKELYLYSNQIGPNQAQFVSQIIQ-NKRKLTS 742

Query: 533 IDLAFNEIRDDGAFAIAQ-ALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           + L+ N+I +DGA  +AQ  L+  E+  +T L+L  NF+   G  A+++A
Sbjct: 743 LGLSNNQIAEDGAIFLAQNGLQNKEN--LTKLSLEGNFIGGTGLIAVSEA 790



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 184/408 (45%), Gaps = 8/408 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           F ++D+    F  E +  L   L  N+    ++   + +T A +      ++ N +L  +
Sbjct: 576 FKNIDLDNNLFSGEAITELFTILPLNK----LNLIKSILTDAQVTPLARQMKINKSLSQI 631

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +S N + D  V  L D +VDN+ +  L ++  DL       + + LKN   L+ L LN+
Sbjct: 632 YMSHNQLSDNSVALLADAIVDNSVLTELFITHNDLSGTSGILLIQALKNKPGLKSLALNS 691

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             ++      LAE+L +N +++ L+L  N  G   A  +++ ++  + L  L L  N I 
Sbjct: 692 CKLNQGLLRELAESLKDNESLKELYLYSNQIGPNQAQFVSQIIQNKRKLTSLGLSNNQIA 751

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           ++G   L       K  L  L +  N I   G   V+E +     L  + LY N + D G
Sbjct: 752 EDGAIFLAQNGLQNKENLTKLSLEGNFIGGTGLIAVSEALMANTELQELFLYNNHLNDVG 811

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            +K+   L+    +  + +  N I S+GA+ I   +K       L L  N I ++   A+
Sbjct: 812 MDKLGQMLQNKINLYALGMEFNKIGSEGAAYIFNNIKKLKNFEKLYLNQNDIKSEVGDAM 871

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
            + L    N+  ++L   ++G  G + +A  L+ N ++ I  L  N    E AK + +  
Sbjct: 872 IDCLSVIENLKEIRLSNNKLGDEGGKAIALALKVNKSLRICQLSNNKFSAEAAKEMVEVI 931

Query: 524 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
           K  N  L  +DL+ N I  +    +A A K   + ++  LNL NN ++
Sbjct: 932 K-QNSQLRDLDLSSNLIIMEELQELANAFK---ESSLECLNLRNNLIS 975



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 160/328 (48%), Gaps = 31/328 (9%)

Query: 282 NNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           NNN+ID  G +S+  ++L +   +  ++   N        AL +G++  K LR + L  N
Sbjct: 47  NNNIIDTEGMSSIFSSILRSYDKLEGINFRCNNFNERVIEALCQGIKMKKELRTVDLGEN 106

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            I D  I  +   L +   +L +L + NN I+  GA  +AE +KN + L  +N+  N IG
Sbjct: 107 RITDASIGFIGDALRTHV-RLHMLFLDNNKITDAGAEGLAECLKNKQDLRILNIDNNQIG 165

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            EGA K+A  LK N  ++ +    N I  +GA AIA  ++    +  + +  N I   GA
Sbjct: 166 PEGARKLAMQLKSNYGLSKLYCDSNRIGEEGAVAIAEAMQMMDSLKKICIENNGIKDRGA 225

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
            ALS VL  +  + +L +   QI + GA  +A MLR    +S L++  N + DEG + ++
Sbjct: 226 IALSRVLMENDTLLSLYIENNQISSQGAIALAKMLRNKMKLSKLNMNHNPIGDEGMQAIS 285

Query: 521 ------QSFKVVNEA---------------------LTSIDLAFNEIRDDGAFAIAQALK 553
                 ++ +V+  A                     LT I L  N+I  +GA  +A+ LK
Sbjct: 286 EGISQNETLRVITIADAGITKNSLAVFARSLKNKRFLTKILLDSNKIGIEGAKILAEGLK 345

Query: 554 ANEDVAVTSLNLANNFLTKFGQSALTDA 581
            NE   +T+L+L++  + + G  AL  A
Sbjct: 346 ENE--TLTNLHLSHCLILEEGAVALATA 371



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 131/260 (50%), Gaps = 4/260 (1%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGD-EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           + + L     L +L    N+I D EG+ ++ S +     KL  ++   N+ + +    + 
Sbjct: 30  IQRDLRDRPDLMQLTCENNNIIDTEGMSSIFSSILRSYDKLEGINFRCNNFNERVIEALC 89

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + IK  K L  ++L  N I D     I DAL+ +  +  + L  N I   GA  +A  LK
Sbjct: 90  QGIKMKKELRTVDLGENRITDASIGFIGDALRTHVRLHMLFLDNNKITDAGAEGLAECLK 149

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
           +   +  L++  N IG +GA+ L+  LK +  ++ L     +IG  GA  +A+ ++  ++
Sbjct: 150 NKQDLRILNIDNNQIGPEGARKLAMQLKSNYGLSKLYCDSNRIGEEGAVAIAEAMQMMDS 209

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           +  + +  NG++D GA  L++   + N+ L S+ +  N+I   GA A+A+ L+    + +
Sbjct: 210 LKKICIENNGIKDRGAIALSRVL-MENDTLLSLYIENNQISSQGAIALAKMLR--NKMKL 266

Query: 561 TSLNLANNFLTKFGQSALTD 580
           + LN+ +N +   G  A+++
Sbjct: 267 SKLNMNHNPIGDEGMQAISE 286


>gi|320164769|gb|EFW41668.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 515

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 116/331 (35%), Positives = 170/331 (51%), Gaps = 30/331 (9%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS + IGD   + +   L   A    + LS   +   GA AI E LK N+ L+ L+L++N
Sbjct: 23  LSRSQIGDAEAQAVAKALKFTATTTYVDLSENHISCAGALAIVEALKMNTRLKFLDLSDN 82

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  ++AEAL  N T+  +HL+ +     GA ALA+ L+ N++L  LHL  N IGD
Sbjct: 83  RIGDAGAQAIAEALTVNKTLSGIHLSNDQISNAGATALAEALKVNETLTNLHLVKNHIGD 142

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G +AL                              E ++   +L W+ L  N IGD GA
Sbjct: 143 AGAQAL-----------------------------GEALEVNTTLTWLKLDQNQIGDAGA 173

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + IA+ ++ NRT+  +DL  N I   G  AIA  LK N+ +  L L+ N IG  GA AL+
Sbjct: 174 QAIAEVVQVNRTVAGLDLNQNQIGDAGVQAIAEALKVNTTLKELLLSDNQIGNAGATALA 233

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           E LK +  +    L   QIG +GA+ +A+ L+ N T++ L L  N + D GA+ +A++ +
Sbjct: 234 EALKVNTAMRKFALLNNQIGDAGAQALAEALKVNKTLTELWLNFNQIGDVGAQAIAEALR 293

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            VN+ LT + L  N I   G+ AI  A   N
Sbjct: 294 -VNKTLTQLVLFSNCIGKLGSQAIDAACAGN 323



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 164/286 (57%), Gaps = 4/286 (1%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++A+AL   +T   + L+ N+    GA A+ + L+ N  L+ L L  N IGD G +A+  
Sbjct: 35  AVAKALKFTATTTYVDLSENHISCAGALAIVEALKMNTRLKFLDLSDNRIGDAGAQAIAE 94

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L+  K  L+ + + N+ IS  GA  +AE +K  ++L  ++L  N IGD GA+ + +AL+
Sbjct: 95  ALTVNK-TLSGIHLSNDQISNAGATALAEALKVNETLTNLHLVKNHIGDAGAQALGEALE 153

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+T + L  N I   GA AIA V++ N  +  LDL  N IG  G +A++E LK +  
Sbjct: 154 VNTTLTWLKLDQNQIGDAGAQAIAEVVQVNRTVAGLDLNQNQIGDAGVQAIAEALKVNTT 213

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           +  L L   QIG +GA  +A+ L+ N  +    L  N + D GA+ LA++ KV N+ LT 
Sbjct: 214 LKELLLSDNQIGNAGATALAEALKVNTAMRKFALLNNQIGDAGAQALAEALKV-NKTLTE 272

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           + L FN+I D GA AIA+AL+ N+   +T L L +N + K G  A+
Sbjct: 273 LWLNFNQIGDVGAQAIAEALRVNK--TLTQLVLFSNCIGKLGSQAI 316



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 171/353 (48%), Gaps = 57/353 (16%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           V +S    GD     +A++L +  T   V  + N I+ AG  A    L+ N  LK L+LS
Sbjct: 21  VLLSRSQIGDAEAQAVAKALKFTATTTYVDLSENHISCAGALAIVEALKMNTRLKFLDLS 80

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD G                            A+AIAE L  N  L  + L+N+ I
Sbjct: 81  DNRIGDAG----------------------------AQAIAEALTVNKTLSGIHLSNDQI 112

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             +G T+LAEAL  N T+ +LHL  N+ G  GA AL + LE N +L  L L  N IGD G
Sbjct: 113 SNAGATALAEALKVNETLTNLHLVKNHIGDAGAQALGEALEVNTTLTWLKLDQNQIGDAG 172

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            +A                             +AE ++  +++  ++L  N IGD G + 
Sbjct: 173 AQA-----------------------------IAEVVQVNRTVAGLDLNQNQIGDAGVQA 203

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           IA+ALK N T+  + L  N I + GA+A+A  LK N+ +    L  N IG  GA+AL+E 
Sbjct: 204 IAEALKVNTTLKELLLSDNQIGNAGATALAEALKVNTAMRKFALLNNQIGDAGAQALAEA 263

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           LK +  +  L L + QIG  GA+ +A+ LR N T++ L L +N +   G++ +
Sbjct: 264 LKVNKTLTELWLNFNQIGDVGAQAIAEALRVNKTLTQLVLFSNCIGKLGSQAI 316



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 145/258 (56%), Gaps = 4/258 (1%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  + IGD   +A+   L         +D+  N IS  GA  + E +K    L +++L  
Sbjct: 23  LSRSQIGDAEAQAVAKALKF-TATTTYVDLSENHISCAGALAIVEALKMNTRLKFLDLSD 81

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IGD GA+ IA+AL  N+T++ I L  + I + GA+A+A  LK N  +T+L L  N IG
Sbjct: 82  NRIGDAGAQAIAEALTVNKTLSGIHLSNDQISNAGATALAEALKVNETLTNLHLVKNHIG 141

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             GA+AL E L+ +  +  LKL   QIG +GA+ +A++++ N T++ LDL  N + D G 
Sbjct: 142 DAGAQALGEALEVNTTLTWLKLDQNQIGDAGAQAIAEVVQVNRTVAGLDLNQNQIGDAGV 201

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 576
           + +A++ K VN  L  + L+ N+I + GA A+A+ALK N   A+    L NN +   G  
Sbjct: 202 QAIAEALK-VNTTLKELLLSDNQIGNAGATALAEALKVN--TAMRKFALLNNQIGDAGAQ 258

Query: 577 ALTDAKDLVYEMSEKEVN 594
           AL +A  +   ++E  +N
Sbjct: 259 ALAEALKVNKTLTELWLN 276



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 123/254 (48%), Gaps = 29/254 (11%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  S + +S     + G   LAE+L  N+T   +    N I  AG +A    L+ N  L 
Sbjct: 100 KTLSGIHLSNDQISNAGATALAEALKVNETLTNLHLVKNHIGDAGAQALGEALEVNTTLT 159

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IGD G + + +++  N  V  L L+   + D G +AIAE LK N+ L+ L L
Sbjct: 160 WLKLDQNQIGDAGAQAIAEVVQVNRTVAGLDLNQNQIGDAGVQAIAEALKVNTTLKELLL 219

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++N I  +G T+LAEAL  N+ +R   L  N  G  GA ALA+ L+ NK+L EL L+ N 
Sbjct: 220 SDNQIGNAGATALAEALKVNTAMRKFALLNNQIGDAGAQALAEALKVNKTLTELWLNFNQ 279

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD G +A                             +AE ++  K+L  + L+ N IG 
Sbjct: 280 IGDVGAQA-----------------------------IAEALRVNKTLTQLVLFSNCIGK 310

Query: 402 EGAEKIADALKQNR 415
            G++ I  A   NR
Sbjct: 311 LGSQAIDAACAGNR 324



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 105/197 (53%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K     +++ +   + GD G   L E+L  N T   +    N I  AG +A   V
Sbjct: 120 LAEALKVNETLTNLHLVKNHIGDAGAQALGEALEVNTTLTWLKLDQNQIGDAGAQAIAEV 179

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           +Q N  +  L+L+ N IGD GV+ + + L  N  ++ L LS   + + GA A+AE LK N
Sbjct: 180 VQVNRTVAGLDLNQNQIGDAGVQAIAEALKVNTTLKELLLSDNQIGNAGATALAEALKVN 239

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + +R   L NN I  +G  +LAEAL  N T+  L LN N  G +GA A+A+ L  NK+L 
Sbjct: 240 TAMRKFALLNNQIGDAGAQALAEALKVNKTLTELWLNFNQIGDVGAQAIAEALRVNKTLT 299

Query: 334 ELHLHGNSIGDEGIRAL 350
           +L L  N IG  G +A+
Sbjct: 300 QLVLFSNCIGKLGSQAI 316



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 86/179 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L E  +     + + +     GD G   +AE +  N+T   +    N I  AG++A  
Sbjct: 146 QALGEALEVNTTLTWLKLDQNQIGDAGAQAIAEVVQVNRTVAGLDLNQNQIGDAGVQAIA 205

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  LK L LS N IG+ G   L + L  N  + +  L +  + D GA+A+AE LK
Sbjct: 206 EALKVNTTLKELLLSDNQIGNAGATALAEALKVNTAMRKFALLNNQIGDAGAQALAEALK 265

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
            N  L  L LN N I   G  ++AEAL  N T+  L L  N  G LG+ A+     GN+
Sbjct: 266 VNKTLTELWLNFNQIGDVGAQAIAEALRVNKTLTQLVLFSNCIGKLGSQAIDAACAGNR 324


>gi|320170306|gb|EFW47205.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 501

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 178/323 (55%), Gaps = 15/323 (4%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+AIAE LK N+ L  LEL  + I   G  + AEAL  N+T+ +L +            
Sbjct: 31  GAQAIAEGLKVNTTLTSLELMEHDIGNDGAKAFAEALKVNTTLTTLSIR----------- 79

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
             + LE  + L+  +L  N IG  G +A+   L   K  L +L +  N I + GA  +AE
Sbjct: 80  -LETLERKRLLKHSNLPQNQIGQGGAQAIAEALKVNK-TLTLLILRENQIGSAGAQAIAE 137

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K   +L  + L  N IGD G + IA+ALK N+T+T ++L GN I   GA AIA  LK 
Sbjct: 138 ALKVNTTLKELRLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQIGVAGAEAIAEALKR 197

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  + +L L  N IG  GA+ +++ L+ +  + TL L   Q+G +GA+ +A++L+ N T+
Sbjct: 198 NMTVQTLSLERNQIGDVGARVIAKALEANMAVTTLSLCENQLGDAGAQVLAEVLKVNATL 257

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           ++L L  N L D GAK  A++ + VN  +  +DL  N I + GA AI +A + N++  V 
Sbjct: 258 AVLYLHENQLGDAGAKAFAEALR-VNMTVQRLDLTGNCIGNLGAQAIDEARQVNDECRV- 315

Query: 562 SLNLANNFLTKFGQSALTDAKDL 584
           +++   N LT   +  L  A+D+
Sbjct: 316 NIDRQINPLTLSLRPRLATAEDI 338



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 146/285 (51%), Gaps = 18/285 (6%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS---------------SRKG 359
           G  GA A+A+GL+ N +L  L L  + IG++G +A    L                 RK 
Sbjct: 28  GVAGAQAIAEGLKVNTTLTSLELMEHDIGNDGAKAFAEALKVNTTLTTLSIRLETLERKR 87

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
            L   ++  N I   GA  +AE +K  K+L  + L  N IG  GA+ IA+ALK N T+  
Sbjct: 88  LLKHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILRENQIGSAGAQAIAEALKVNTTLKE 147

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           + L  N I   G  AIA  LK N  +T L+L  N IG  GA+A++E LK +  + TL L 
Sbjct: 148 LRLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQIGVAGAEAIAEALKRNMTVQTLSLE 207

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
             QIG  GA  +A  L  N  ++ L L  N L D GA+ LA+  K VN  L  + L  N+
Sbjct: 208 RNQIGDVGARVIAKALEANMAVTTLSLCENQLGDAGAQVLAEVLK-VNATLAVLYLHENQ 266

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           + D GA A A+AL+ N  + V  L+L  N +   G  A+ +A+ +
Sbjct: 267 LGDAGAKAFAEALRVN--MTVQRLDLTGNCIGNLGAQAIDEARQV 309



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 160/323 (49%), Gaps = 21/323 (6%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           ++ L + AK   A+  + + GR  G  G   +AE L  N T   +    + I   G KAF
Sbjct: 5   QRMLYDQAKSANAYYDLLLPGR-VGVAGAQAIAEGLKVNTTLTSLELMEHDIGNDGAKAF 63

Query: 211 DGVLQSNIALKTL----------------NLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
              L+ N  L TL                NL  N IG  G + + + L  N  +  L L 
Sbjct: 64  AEALKVNTTLTTLSIRLETLERKRLLKHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILR 123

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
              +   GA+AIAE LK N+ L+ L L+ N I  +G  ++AEAL  N T+  L+L GN  
Sbjct: 124 ENQIGSAGAQAIAEALKVNTTLKELRLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQI 183

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A+A+ L+ N +++ L L  N IGD G R +   L +    +  L +  N +   
Sbjct: 184 GVAGAEAIAEALKRNMTVQTLSLERNQIGDVGARVIAKALEANMA-VTTLSLCENQLGDA 242

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K   +L  + L+ N +GD GA+  A+AL+ N T+  +DL GN I + GA A
Sbjct: 243 GAQVLAEVLKVNATLAVLYLHENQLGDAGAKAFAEALRVNMTVQRLDLTGNCIGNLGAQA 302

Query: 435 I--ARVLKDNSVITSLDLAYNPI 455
           I  AR + D   + ++D   NP+
Sbjct: 303 IDEARQVNDECRV-NIDRQINPL 324



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 157/311 (50%), Gaps = 14/311 (4%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +  AG +A    L+ N  L +L L  + IG++G K   + L  N       L+++ +R  
Sbjct: 27  VGVAGAQAIAEGLKVNTTLTSLELMEHDIGNDGAKAFAEALKVNT-----TLTTLSIR-- 79

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
                 E L+   +L+   L  N I   G  ++AEAL  N T+  L L  N  G+ GA A
Sbjct: 80  -----LETLERKRLLKHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILRENQIGSAGAQA 134

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+ L+ N +L+EL L  N IGD G +A+   L   K  L  L++  N I   GA  +AE
Sbjct: 135 IAEALKVNTTLKELRLDKNQIGDAGTKAIAEALKMNK-TLTKLNLIGNQIGVAGAEAIAE 193

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K   ++  ++L  N IGD GA  IA AL+ N  +TT+ L  N +   GA  +A VLK 
Sbjct: 194 ALKRNMTVQTLSLERNQIGDVGARVIAKALEANMAVTTLSLCENQLGDAGAQVLAEVLKV 253

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ +  L L  N +G  GAKA +E L+ +  +  L L    IG  GA+ + +  + N+  
Sbjct: 254 NATLAVLYLHENQLGDAGAKAFAEALRVNMTVQRLDLTGNCIGNLGAQAIDEARQVNDEC 313

Query: 502 SI-LDLRANGL 511
            + +D + N L
Sbjct: 314 RVNIDRQINPL 324



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 126/226 (55%), Gaps = 19/226 (8%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI---------- 420
           +   GA  +AE +K   +L  + L  +DIG++GA+  A+ALK N T+TT+          
Sbjct: 27  VGVAGAQAIAEGLKVNTTLTSLELMEHDIGNDGAKAFAEALKVNTTLTTLSIRLETLERK 86

Query: 421 ------DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
                 +L  N I   GA AIA  LK N  +T L L  N IG+ GA+A++E LK +  + 
Sbjct: 87  RLLKHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILRENQIGSAGAQAIAEALKVNTTLK 146

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
            L+L   QIG +G + +A+ L+ N T++ L+L  N +   GA+ +A++ K  N  + ++ 
Sbjct: 147 ELRLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQIGVAGAEAIAEALK-RNMTVQTLS 205

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           L  N+I D GA  IA+AL+AN  +AVT+L+L  N L   G   L +
Sbjct: 206 LERNQIGDVGARVIAKALEAN--MAVTTLSLCENQLGDAGAQVLAE 249



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 112/199 (56%), Gaps = 19/199 (9%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL---------- 448
           +G  GA+ IA+ LK N T+T+++L  ++I + GA A A  LK N+ +T+L          
Sbjct: 27  VGVAGAQAIAEGLKVNTTLTSLELMEHDIGNDGAKAFAEALKVNTTLTTLSIRLETLERK 86

Query: 449 ------DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
                 +L  N IG  GA+A++E LK +  +  L L   QIG++GA+ +A+ L+ N T+ 
Sbjct: 87  RLLKHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILRENQIGSAGAQAIAEALKVNTTLK 146

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N + D G K +A++ K +N+ LT ++L  N+I   GA AIA+ALK N  + V +
Sbjct: 147 ELRLDKNQIGDAGTKAIAEALK-MNKTLTKLNLIGNQIGVAGAEAIAEALKRN--MTVQT 203

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+L  N +   G   +  A
Sbjct: 204 LSLERNQIGDVGARVIAKA 222



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 111/235 (47%), Gaps = 6/235 (2%)

Query: 105 LWKLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESK------QTLNEFA 158
           L  L  K L+   + P     +G   ++     +    T  + RE++      Q + E  
Sbjct: 80  LETLERKRLLKHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILRENQIGSAGAQAIAEAL 139

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K       + +     GD G   +AE+L  N+T  +++   N I  AG +A    L+ N+
Sbjct: 140 KVNTTLKELRLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQIGVAGAEAIAEALKRNM 199

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            ++TL+L  N IGD G + +   L  N  V  L L    L D GA+ +AE+LK N+ L V
Sbjct: 200 TVQTLSLERNQIGDVGARVIAKALEANMAVTTLSLCENQLGDAGAQVLAEVLKVNATLAV 259

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           L L+ N +  +G  + AEAL  N T++ L L GN  G LGA A+ +  + N   R
Sbjct: 260 LYLHENQLGDAGAKAFAEALRVNMTVQRLDLTGNCIGNLGAQAIDEARQVNDECR 314



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 19/116 (16%)

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI-------- 533
           ++G +GA+ +A+ L+ N T++ L+L  + + ++GAK  A++ K VN  LT++        
Sbjct: 26  RVGVAGAQAIAEGLKVNTTLTSLELMEHDIGNDGAKAFAEALK-VNTTLTTLSIRLETLE 84

Query: 534 --------DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
                   +L  N+I   GA AIA+ALK N+   +T L L  N +   G  A+ +A
Sbjct: 85  RKRLLKHSNLPQNQIGQGGAQAIAEALKVNK--TLTLLILRENQIGSAGAQAIAEA 138


>gi|320170816|gb|EFW47715.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 518

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 113/307 (36%), Positives = 173/307 (56%), Gaps = 8/307 (2%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L+   I  +   ++AE L  N+T+ +L L  N  G  GA A+A     N  L++L L+
Sbjct: 26  LYLDRKQIGDAEAQAIAEGLKVNTTVHTLGLYDNQIGDAGAIAIAGAFAANPKLQKLSLY 85

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            N IGD G RA+   +   KG     L++  N I   GA  +AE +     L+ + L+ N
Sbjct: 86  DNRIGDAGARAIAEAI---KGSCVWELNLQKNQIGDAGAQAIAETLDENSRLMTLTLWKN 142

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IGD GA  IA+ALK+N T+ ++ LG N I   GA AI   LK NS +T L+L  N IG 
Sbjct: 143 RIGDVGATAIAEALKENTTLCSLKLGENQIGDAGAQAIGEALKVNSDLTRLNLQQNQIGH 202

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
            GA+A+ E LK +  ++ L L   +IG +GA+ +A+ L+ N++I  LDL +  + D GA 
Sbjct: 203 AGAQAIGEALKVNTCLSKLTLYGNRIGDAGAQAIAEALKVNSSIQELDLSSTQIGDAGAL 262

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 577
            LA+  ++V+  L  +DL +N I D GA AIA+A+K  +   +T L L++N +       
Sbjct: 263 ALAE--RMVHSELAELDLGYNRIGDVGAQAIAKAIK--DGATLTGLYLSHNCIGDAAVDL 318

Query: 578 LTDAKDL 584
           +T+A+++
Sbjct: 319 ITEAQEI 325



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 151/322 (46%), Gaps = 31/322 (9%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           +  GD     +AE L  N T   +    N I  AG  A  G   +N  L+ L+L  N IG
Sbjct: 31  KQIGDAEAQAIAEGLKVNTTVHTLGLYDNQIGDAGAIAIAGAFAANPKLQKLSLYDNRIG 90

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
           D G + + +  +  + V  L L    + D GA+AIAE L  NS L  L L  N I   G 
Sbjct: 91  DAGARAIAEA-IKGSCVWELNLQKNQIGDAGAQAIAETLDENSRLMTLTLWKNRIGDVGA 149

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           T++AEAL EN+T+ SL L  N  G  GA A+ + L+ N  L  L+L  N IG  G +A+ 
Sbjct: 150 TAIAEALKENTTLCSLKLGENQIGDAGAQAIGEALKVNSDLTRLNLQQNQIGHAGAQAIG 209

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L                            +  C S L   LY N IGD GA+ IA+AL
Sbjct: 210 EALK---------------------------VNTCLSKL--TLYGNRIGDAGAQAIAEAL 240

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           K N +I  +DL    I   GA A+A  +  +S +  LDL YN IG  GA+A+++ +K   
Sbjct: 241 KVNSSIQELDLSSTQIGDAGALALAERMV-HSELAELDLGYNRIGDVGAQAIAKAIKDGA 299

Query: 472 NINTLKLGWCQIGASGAEFVAD 493
            +  L L    IG +  + + +
Sbjct: 300 TLTGLYLSHNCIGDAAVDLITE 321



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 113/337 (33%), Positives = 165/337 (48%), Gaps = 8/337 (2%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L    IGD   + + + L  N  V  L L    + D GA AIA     N  L+ L L 
Sbjct: 26  LYLDRKQIGDAEAQAIAEGLKVNTTVHTLGLYDNQIGDAGAIAIAGAFAANPKLQKLSLY 85

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I  +G  ++AEA ++ S +  L+L  N  G  GA A+A+ L+ N  L  L L  N I
Sbjct: 86  DNRIGDAGARAIAEA-IKGSCVWELNLQKNQIGDAGAQAIAETLDENSRLMTLTLWKNRI 144

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G  A+   L      L  L +G N I   GA  + E +K    L  +NL  N IG  
Sbjct: 145 GDVGATAIAEALKENT-TLCSLKLGENQIGDAGAQAIGEALKVNSDLTRLNLQQNQIGHA 203

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ I +ALK N  ++ + L GN I   GA AIA  LK NS I  LDL+   IG  GA A
Sbjct: 204 GAQAIGEALKVNTCLSKLTLYGNRIGDAGAQAIAEALKVNSSIQELDLSSTQIGDAGALA 263

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           L+E +  H  +  L LG+ +IG  GA+ +A  ++   T++ L L  N + D     + ++
Sbjct: 264 LAERM-VHSELAELDLGYNRIGDVGAQAIAKAIKDGATLTGLYLSHNCIGDAAVDLITEA 322

Query: 523 FKVVN-EALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++ +     ++D   N +    AF++   L   +D+
Sbjct: 323 QEIEDMPPYLTVDPQINPL----AFSLLPRLATADDL 355



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 121/237 (51%), Gaps = 3/237 (1%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE++       E++   N I  AG +A    L  N  L TL L  N IGD 
Sbjct: 89  IGDAGARAIAEAIK-GSCVWELNLQKNQIGDAGAQAIAETLDENSRLMTLTLWKNRIGDV 147

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   + + L +N  +  L+L    + D GA+AI E LK NS L  L L  N I ++G  +
Sbjct: 148 GATAIAEALKENTTLCSLKLGENQIGDAGAQAIGEALKVNSDLTRLNLQQNQIGHAGAQA 207

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           + EAL  N+ +  L L GN  G  GA A+A+ L+ N S++EL L    IGD G  AL   
Sbjct: 208 IGEALKVNTCLSKLTLYGNRIGDAGAQAIAEALKVNSSIQELDLSSTQIGDAGALALAER 267

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           +     +LA LD+G N I   GA  +A+ IK+  +L  + L  N IGD   + I +A
Sbjct: 268 MV--HSELAELDLGYNRIGDVGAQAIAKAIKDGATLTGLYLSHNCIGDAAVDLITEA 322



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 1/196 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E   E     ++ +     GD G   +AE+L  N T   +    N I  AG +A  
Sbjct: 122 QAIAETLDENSRLMTLTLWKNRIGDVGATAIAEALKENTTLCSLKLGENQIGDAGAQAIG 181

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNL  N IG  G + + + L  N  + +L L    + D GA+AIAE LK
Sbjct: 182 EALKVNSDLTRLNLQQNQIGHAGAQAIGEALKVNTCLSKLTLYGNRIGDAGAQAIAEALK 241

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS ++ L+L++  I  +G  +LAE ++ +S +  L L  N  G +GA A+AK ++   +
Sbjct: 242 VNSSIQELDLSSTQIGDAGALALAERMV-HSELAELDLGYNRIGDVGAQAIAKAIKDGAT 300

Query: 332 LRELHLHGNSIGDEGI 347
           L  L+L  N IGD  +
Sbjct: 301 LTGLYLSHNCIGDAAV 316


>gi|156353043|ref|XP_001622887.1| predicted protein [Nematostella vectensis]
 gi|156209518|gb|EDO30787.1| predicted protein [Nematostella vectensis]
          Length = 408

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 212/412 (51%), Gaps = 9/412 (2%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+ + + E  K     +S+ + G   GD G   +A  L  N T  ++S A + I  AGIK
Sbjct: 4   EAGRAIGEMLKHNTTVTSLFLLGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIK 63

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIA 267
           A   V+Q+   +  LNLS NP+G +GVK +  +LV +   ++ L L   ++   GAK +A
Sbjct: 64  AITKVIQN---VTRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDVFGAKELA 120

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             L  NS L  L +  N I+  G  +LAE++  N T++ L+++ N  G  G   +    E
Sbjct: 121 IALSRNSCLEELSVACNDINDEGMCALAESVASNETLQVLYISYNNVGQNGKKVIISACE 180

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            +KS+R L+   +SI +   +     L +    +  L I +++++++ +  + E ++   
Sbjct: 181 TSKSVRHLYHENDSILNTFTKPHSVCLVTLNKTVRTLGIRSHNMTSEASRAIGEMLRRNT 240

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           ++  + L    +GD GA  IA  L QN+TI  + L  ++I + G  AI  V+++   +T 
Sbjct: 241 TVTSLFLLGGRLGDSGARGIAIGLAQNKTIADLSLVRSSIGTAGIKAITNVIQN---VTR 297

Query: 448 LDLAYNPIGADGAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           L+L+ NP+G DG KA++ +L K    +  L L  C I   GA+ +A  L  ++ +  L +
Sbjct: 298 LNLSSNPVGYDGVKAIARLLVKSCCRLKFLFLDHCNIDVFGAKELAIALSRDSCLEELSV 357

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
             N + DEG   LA+S    NE L  + +++N +  +G   I  A + ++ V
Sbjct: 358 ACNDINDEGMCALAESV-ASNETLQVLYISYNNVGQNGKKVIISACETSKSV 408



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 148/324 (45%), Gaps = 36/324 (11%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           +  E  +AI E+LK+N+ +  L L    +  SG   +A  L +N+TI  L +  +  G  
Sbjct: 1   MTSEAGRAIGEMLKHNTTVTSLFLLGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTA 60

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G  A+ K ++   ++  L+L  N +G +G++A+   L     +L  L + + +I   GA 
Sbjct: 61  GIKAITKVIQ---NVTRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDVFGAK 117

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +     L  +++  NDI DEG   +A+++  N T+  + +  NN+   G   I  
Sbjct: 118 ELAIALSRNSCLEELSVACNDINDEGMCALAESVASNETLQVLYISYNNVGQNGKKVIIS 177

Query: 438 VLKD-----------------------------NSVITSLDLAYNPIGADGAKALSEVLK 468
             +                              N  + +L +  + + ++ ++A+ E+L+
Sbjct: 178 ACETSKSVRHLYHENDSILNTFTKPHSVCLVTLNKTVRTLGIRSHNMTSEASRAIGEMLR 237

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
            +  + +L L   ++G SGA  +A  L  N TI+ L L  + +   G K +      V +
Sbjct: 238 RNTTVTSLFLLGGRLGDSGARGIAIGLAQNKTIADLSLVRSSIGTAGIKAITN----VIQ 293

Query: 529 ALTSIDLAFNEIRDDGAFAIAQAL 552
            +T ++L+ N +  DG  AIA+ L
Sbjct: 294 NVTRLNLSSNPVGYDGVKAIARLL 317


>gi|328866540|gb|EGG14924.1| hypothetical protein DFA_10798 [Dictyostelium fasciculatum]
          Length = 760

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 219/425 (51%), Gaps = 17/425 (4%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
             D     LAESL  N T   ++ + N I   G  +    L+ N ++  LN S N +G++
Sbjct: 310 ISDSAAKILAESLETNDTLLSLNLSVNEIRQDGSVSLANALKVNKSITLLNYSYNLLGEQ 369

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G     ++L+ N  +  L LS+  +       I   L  N+ L+ L L  NMID  G   
Sbjct: 370 GTMAFSEMLIYNKSLTHLNLSANKITFSNTPTITLALSKNTTLKSLNLLRNMIDPIGCQY 429

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK--SLRELHLHGNSIGDEGIRALM 351
           +A  L  N ++ S++ + N  G  G+ +++K L  NK  +++EL L  N I D+G  A  
Sbjct: 430 IANGLANNQSLTSINFSSNKLGNQGSTSISKALAINKGSAIKELDLSSNCIEDQGAAAFA 489

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKS-LLWINLYMNDIGDEGAEKIAD 409
           + +   +  +  LD+  N I + G   +A+ +++N KS +  INL  N I   GA+ +A+
Sbjct: 490 NVIIYNQS-VTTLDLSVNWIDSNGVIRLAQAFLENPKSPITSINLSCNTICPLGAKHLAE 548

Query: 410 ALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           AL   + ++  I+L  N I ++GA  +++ L  N+ ITS++L+ N IG +G K LS  L 
Sbjct: 549 ALMHPDSSLHHINLFSNYIETEGAFELSKALATNTSITSIELSANLIGNEGVKYLSRALL 608

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
            + +I ++ L    +   G + + +++  N TI  LDL  N +   GA+ L+++  + N+
Sbjct: 609 TNVSIKSISLSQSLLSYEGIQHIVELMSVNTTIRYLDLSYNIIGSRGAQELSRAL-LQNK 667

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD-AKDLVYE 587
            +TS+DL+ N + D+GA AIA     N    +  L+L NN   K G    TD AK +V  
Sbjct: 668 TITSLDLSSNSLGDEGATAIADIFPIN--TTLQRLSLYNN---KIG----TDGAKHIVRN 718

Query: 588 MSEKE 592
           +S+  
Sbjct: 719 LSKNH 723



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 117/374 (31%), Positives = 194/374 (51%), Gaps = 14/374 (3%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDE--GVKCLCDILVDNAGVERL 251
           ++   N +   GI     ++++N + +K+LNL+ + IG E   +    D+L  N  +  L
Sbjct: 244 INLTVNLMYTNGIDVICEIMKTNQSVIKSLNLNKSKIGRETNSLMVFSDVLKLNHSLTSL 303

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
            LSS  + D  AK +AE L+ N  L  L L+ N I   G  SLA AL  N +I  L+ + 
Sbjct: 304 DLSSSQISDSAAKILAESLETNDTLLSLNLSVNEIRQDGSVSLANALKVNKSITLLNYSY 363

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N  G  G  A ++ L  NKSL  L+L  N I       +   L S+   L  L++  N I
Sbjct: 364 NLLGEQGTMAFSEMLIYNKSLTHLNLSANKITFSNTPTITLAL-SKNTTLKSLNLLRNMI 422

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR--TITTIDLGGNNIHS 429
              G  ++A  + N +SL  IN   N +G++G+  I+ AL  N+   I  +DL  N I  
Sbjct: 423 DPIGCQYIANGLANNQSLTSINFSSNKLGNQGSTSISKALAINKGSAIKELDLSSNCIED 482

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN----INTLKLGWCQIGA 485
           +GA+A A V+  N  +T+LDL+ N I ++G   L++   F  N    I ++ L    I  
Sbjct: 483 QGAAAFANVIIYNQSVTTLDLSVNWIDSNGVIRLAQA--FLENPKSPITSINLSCNTICP 540

Query: 486 SGAEFVADMLRY-NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
            GA+ +A+ L + ++++  ++L +N +  EGA  L+++    N ++TSI+L+ N I ++G
Sbjct: 541 LGAKHLAEALMHPDSSLHHINLFSNYIETEGAFELSKAL-ATNTSITSIELSANLIGNEG 599

Query: 545 AFAIAQALKANEDV 558
              +++AL  N  +
Sbjct: 600 VKYLSRALLTNVSI 613



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 158/307 (51%), Gaps = 6/307 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQ--TAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           ++ +S++ S    G++G   ++++L  N+    +E+  ++N I   G  AF  V+  N +
Sbjct: 438 QSLTSINFSSNKLGNQGSTSISKALAINKGSAIKELDLSSNCIEDQGAAAFANVIIYNQS 497

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAE-LLKNNSIL 276
           + TL+LS N I   GV  L    ++N  + +  + LS   +   GAK +AE L+  +S L
Sbjct: 498 VTTLDLSVNWIDSNGVIRLAQAFLENPKSPITSINLSCNTICPLGAKHLAEALMHPDSSL 557

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             + L +N I+  G   L++AL  N++I S+ L+ N  G  G   L++ L  N S++ + 
Sbjct: 558 HHINLFSNYIETEGAFELSKALATNTSITSIELSANLIGNEGVKYLSRALLTNVSIKSIS 617

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  + +  EGI+ ++  L S    +  LD+  N I ++GA  ++  +   K++  ++L  
Sbjct: 618 LSQSLLSYEGIQHIVE-LMSVNTTIRYLDLSYNIIGSRGAQELSRALLQNKTITSLDLSS 676

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N +GDEGA  IAD    N T+  + L  N I + GA  I R L  N  + S++L  N I 
Sbjct: 677 NSLGDEGATAIADIFPINTTLQRLSLYNNKIGTDGAKHIVRNLSKNHTLFSINLLANRID 736

Query: 457 ADGAKAL 463
               K +
Sbjct: 737 TQCLKPI 743



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 4/261 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAF-DGVLQSNI 218
           ++ +++D+S       G+  LA++   N  +    ++ + N I   G K   + ++  + 
Sbjct: 496 QSVTTLDLSVNWIDSNGVIRLAQAFLENPKSPITSINLSCNTICPLGAKHLAEALMHPDS 555

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           +L  +NL  N I  EG   L   L  N  +  ++LS+  + +EG K ++  L  N  ++ 
Sbjct: 556 SLHHINLFSNYIETEGAFELSKALATNTSITSIELSANLIGNEGVKYLSRALLTNVSIKS 615

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + L+ +++ Y G   + E +  N+TIR L L+ N  G+ GA  L++ L  NK++  L L 
Sbjct: 616 ISLSQSLLSYEGIQHIVELMSVNTTIRYLDLSYNIIGSRGAQELSRALLQNKTITSLDLS 675

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            NS+GDEG  A+ + +      L  L + NN I   GA H+   +    +L  INL  N 
Sbjct: 676 SNSLGDEGATAI-ADIFPINTTLQRLSLYNNKIGTDGAKHIVRNLSKNHTLFSINLLANR 734

Query: 399 IGDEGAEKIADALKQNRTITT 419
           I  +  + I   L+  +   T
Sbjct: 735 IDTQCLKPILKRLEHTQHTQT 755


>gi|320168903|gb|EFW45802.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 792

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/310 (36%), Positives = 170/310 (54%), Gaps = 20/310 (6%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DE  KAIAE LK ++ L  L L+ N I  +G  ++AEAL  N T+ SL L  N  G +GA
Sbjct: 34  DEQTKAIAEALKVHTKLTDLSLDGNQIGDAGAQAIAEALKVNKTLASLSLGVNQIGDVGA 93

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRAL---------MSGLSSRKGKLAVL-DIGNN 369
            A+A+ L  NK+L+EL L  N I + GI  L         +S     K   A L ++ + 
Sbjct: 94  QAIAEVLTANKTLKELGLDQNFISENGINVLKQIGDKTFFLSADDQSKPSSAQLQEMASR 153

Query: 370 SISAKGAFHVAEYIKNCKSLLW---------INLYMNDIGDEGAEKIADALKQNRTITTI 420
           +   + +  + + I   +  L+         ++L+  +IGDE A+ IA+ALK N  ++ +
Sbjct: 154 AAQTRPSVLLYQIINQRQRELYDEVMNASGTLHLFEYEIGDEEAKAIAEALKVNTKLSWL 213

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           +L  N I   GA AIA  L  N+ +T L L  N IG  GA+A++E LK +  +  L L +
Sbjct: 214 NLAENQIGDVGAQAIAEGLTVNTTLTELFLNRNQIGDVGAQAIAEALKVNTKLTLLSLDY 273

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            QIG +GA+ +A+ L+ N T++   L  N + D GA+ +A++ K VN+ LT +DL  N I
Sbjct: 274 NQIGDAGAQAIAEALKVNKTLTEFYLDDNQIGDAGAQAIAEALK-VNKKLTKLDLDQNFI 332

Query: 541 RDDGAFAIAQ 550
            D+G  A+ Q
Sbjct: 333 SDNGIKALRQ 342



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 153/327 (46%), Gaps = 38/327 (11%)

Query: 144 GKLFRESKQTLNEFAKEL-------RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS 196
           G LF + KQ  +E  K +          + + + G   GD G   +AE+L  N+T   +S
Sbjct: 23  GVLFLDGKQIDDEQTKAIAEALKVHTKLTDLSLDGNQIGDAGAQAIAEALKVNKTLASLS 82

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
              N I   G +A   VL +N  LK L L  N I + G+  L  I     G +   LS+ 
Sbjct: 83  LGVNQIGDVGAQAIAEVLTANKTLKELGLDQNFISENGINVLKQI-----GDKTFFLSAD 137

Query: 257 DLRDEGAKAIAELLK-----NNSIL-------RVLELNNNMIDYSGF------------- 291
           D     +  + E+         S+L       R  EL + +++ SG              
Sbjct: 138 DQSKPSSAQLQEMASRAAQTRPSVLLYQIINQRQRELYDEVMNASGTLHLFEYEIGDEEA 197

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            ++AEAL  N+ +  L+L  N  G +GA A+A+GL  N +L EL L+ N IGD G +A+ 
Sbjct: 198 KAIAEALKVNTKLSWLNLAENQIGDVGAQAIAEGLTVNTTLTELFLNRNQIGDVGAQAIA 257

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L     KL +L +  N I   GA  +AE +K  K+L    L  N IGD GA+ IA+AL
Sbjct: 258 EALKVNT-KLTLLSLDYNQIGDAGAQAIAEALKVNKTLTEFYLDDNQIGDAGAQAIAEAL 316

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARV 438
           K N+ +T +DL  N I   G  A+ +V
Sbjct: 317 KVNKKLTKLDLDQNFISDNGIKALRQV 343



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 132/304 (43%), Gaps = 49/304 (16%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L G  I DE  K + + L  +  +  L L    + D GA+AIAE LK N  L  L L 
Sbjct: 25  LFLDGKQIDDEQTKAIAEALKVHTKLTDLSLDGNQIGDAGAQAIAEALKVNKTLASLSLG 84

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK------------------ 324
            N I   G  ++AE L  N T++ L L+ N+    G N L +                  
Sbjct: 85  VNQIGDVGAQAIAEVLTANKTLKELGLDQNFISENGINVLKQIGDKTFFLSADDQSKPSS 144

Query: 325 -GLEG------------------NKSLREL-----------HLHGNSIGDEGIRALMSGL 354
             L+                   N+  REL           HL    IGDE  +A+   L
Sbjct: 145 AQLQEMASRAAQTRPSVLLYQIINQRQRELYDEVMNASGTLHLFEYEIGDEEAKAIAEAL 204

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
                KL+ L++  N I   GA  +AE +    +L  + L  N IGD GA+ IA+ALK N
Sbjct: 205 KVNT-KLSWLNLAENQIGDVGAQAIAEGLTVNTTLTELFLNRNQIGDVGAQAIAEALKVN 263

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
             +T + L  N I   GA AIA  LK N  +T   L  N IG  GA+A++E LK +  + 
Sbjct: 264 TKLTLLSLDYNQIGDAGAQAIAEALKVNKTLTEFYLDDNQIGDAGAQAIAEALKVNKKLT 323

Query: 475 TLKL 478
            L L
Sbjct: 324 KLDL 327



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 119/267 (44%), Gaps = 51/267 (19%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           VL +    I  +    +AE +K    L  ++L  N IGD GA+ IA+ALK N+T+ ++ L
Sbjct: 24  VLFLDGKQIDDEQTKAIAEALKVHTKLTDLSLDGNQIGDAGAQAIAEALKVNKTLASLSL 83

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV---------------- 466
           G N I   GA AIA VL  N  +  L L  N I  +G   L ++                
Sbjct: 84  GVNQIGDVGAQAIAEVLTANKTLKELGLDQNFISENGINVLKQIGDKTFFLSADDQSKPS 143

Query: 467 -----------------LKFHGNIN---------------TLKLGWCQIGASGAEFVADM 494
                            +  +  IN               TL L   +IG   A+ +A+ 
Sbjct: 144 SAQLQEMASRAAQTRPSVLLYQIINQRQRELYDEVMNASGTLHLFEYEIGDEEAKAIAEA 203

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L+ N  +S L+L  N + D GA+ +A+    VN  LT + L  N+I D GA AIA+ALK 
Sbjct: 204 LKVNTKLSWLNLAENQIGDVGAQAIAEGL-TVNTTLTELFLNRNQIGDVGAQAIAEALKV 262

Query: 555 NEDVAVTSLNLANNFLTKFGQSALTDA 581
           N    +T L+L  N +   G  A+ +A
Sbjct: 263 N--TKLTLLSLDYNQIGDAGAQAIAEA 287



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 47/107 (43%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             GD G   +AE+L  N     +S   N I  AG +A    L+ N  L    L  N IGD
Sbjct: 247 QIGDVGAQAIAEALKVNTKLTLLSLDYNQIGDAGAQAIAEALKVNKTLTEFYLDDNQIGD 306

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            G + + + L  N  + +L L    + D G KA+ ++      L +L
Sbjct: 307 AGAQAIAEALKVNKKLTKLDLDQNFISDNGIKALRQVGNRTCQLNIL 353


>gi|320167147|gb|EFW44046.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1423

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 128/375 (34%), Positives = 194/375 (51%), Gaps = 8/375 (2%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +S     I  A   A    L+ N  L  L+L  N I + G   + + L +NA + +L L 
Sbjct: 24  LSIQRQQIGQAEALAIARALEVNQRLTKLSLRWNEIDETGANAIAEALRENATLTQLDLH 83

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +  +   GA+AIAE L+ N  L  L+L+NN I  +G +++AEAL  N T+  L L+ N  
Sbjct: 84  NNQIGASGARAIAEALRVNKTLTQLDLHNNQIGAAGASAIAEALTVNGTLTQLGLSSNGI 143

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GANA+A  L  N +L +L LH N IG  G RA+   L   K  L  LD+ NN I   
Sbjct: 144 GVGGANAIAVALRENATLTQLDLHNNQIGASGARAIAEALRVNK-TLTQLDLHNNRIGDD 202

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K   +L+ ++L    + + GA+ IA AL  N  ++ +DL  N+I      A
Sbjct: 203 GAEALAEVLKVNATLIQLHLRTTWMSNSGAQAIAKALIVNSRLSELDLYDNHIGDDAKQA 262

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA+ L  NS +  LDL  +      A    ++ K    IN   L   Q+    A ++  +
Sbjct: 263 IAKALLFNSTMKGLDLDIDRQTKPSADLFLQLTKLREAINESSLSGLQV----APYLQTI 318

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKV-VNEALTSIDLAFNEIRDDGAFAIAQALK 553
           L+   T  I+ L  N  +   A+C   + ++ +N +LTS++L  N+I D GA +I++AL+
Sbjct: 319 LQGVQTTRIVKLWLNKCQLGDAECQVIATELRLNTSLTSLELTDNQIGDAGALSISEALR 378

Query: 554 ANEDVAVTSLNLANN 568
            N+   + SLNL NN
Sbjct: 379 ENK--TLQSLNLTNN 391



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 159/331 (48%), Gaps = 30/331 (9%)

Query: 155 NEFAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           N  A+ LR     + +D+     G  G   +AE+L  N+T  ++    N I AAG  A  
Sbjct: 65  NAIAEALRENATLTQLDLHNNQIGASGARAIAEALRVNKTLTQLDLHNNQIGAAGASAIA 124

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  N  L  L LS N IG  G   +   L +NA + +L L +  +   GA+AIAE L+
Sbjct: 125 EALTVNGTLTQLGLSSNGIGVGGANAIAVALRENATLTQLDLHNNQIGASGARAIAEALR 184

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L+NN I   G  +LAE L  N+T+  LHL   +    GA A+AK L  N  
Sbjct: 185 VNKTLTQLDLHNNRIGDDGAEALAEVLKVNATLIQLHLRTTWMSNSGAQAIAKALIVNSR 244

Query: 332 LRELHLHGNSIGDEGIRALMSGL---SSRKG-----------------KLAVLDIGNNSI 371
           L EL L+ N IGD+  +A+   L   S+ KG                 +L  L    N  
Sbjct: 245 LSELDLYDNHIGDDAKQAIAKALLFNSTMKGLDLDIDRQTKPSADLFLQLTKLREAINES 304

Query: 372 SAKGAFHVAEYIKN----CKSLLWINLYMN--DIGDEGAEKIADALKQNRTITTIDLGGN 425
           S  G   VA Y++      ++   + L++N   +GD   + IA  L+ N ++T+++L  N
Sbjct: 305 SLSG-LQVAPYLQTILQGVQTTRIVKLWLNKCQLGDAECQVIATELRLNTSLTSLELTDN 363

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
            I   GA +I+  L++N  + SL+L  N IG
Sbjct: 364 QIGDAGALSISEALRENKTLQSLNLTNNQIG 394



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 143/261 (54%), Gaps = 6/261 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L +    IG     A+   L   + +L  L +  N I   GA  +AE ++   +L  ++L
Sbjct: 24  LSIQRQQIGQAEALAIARALEVNQ-RLTKLSLRWNEIDETGANAIAEALRENATLTQLDL 82

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N IG  GA  IA+AL+ N+T+T +DL  N I + GASAIA  L  N  +T L L+ N 
Sbjct: 83  HNNQIGASGARAIAEALRVNKTLTQLDLHNNQIGAAGASAIAEALTVNGTLTQLGLSSNG 142

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA A++  L+ +  +  L L   QIGASGA  +A+ LR N T++ LDL  N + D+
Sbjct: 143 IGVGGANAIAVALRENATLTQLDLHNNQIGASGARAIAEALRVNKTLTQLDLHNNRIGDD 202

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           GA+ LA+  K VN  L  + L    + + GA AIA+AL  N    ++ L+L +N +    
Sbjct: 203 GAEALAEVLK-VNATLIQLHLRTTWMSNSGAQAIAKALIVNS--RLSELDLYDNHIGDDA 259

Query: 575 QSALTDAKDLVYEMSEKEVNI 595
           + A+  AK L++  + K +++
Sbjct: 260 KQAI--AKALLFNSTMKGLDL 278



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 87/226 (38%), Gaps = 54/226 (23%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +D+     GD+G   LAE L  N T  ++      ++ +G +A    L  N  L 
Sbjct: 187 KTLTQLDLHNNRIGDDGAEALAEVLKVNATLIQLHLRTTWMSNSGAQAIAKALIVNSRLS 246

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNA----------------------------------- 246
            L+L  N IGD+  + +   L+ N+                                   
Sbjct: 247 ELDLYDNHIGDDAKQAIAKALLFNSTMKGLDLDIDRQTKPSADLFLQLTKLREAINESSL 306

Query: 247 --------------GVE-----RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
                         GV+     +L L+   L D   + IA  L+ N+ L  LEL +N I 
Sbjct: 307 SGLQVAPYLQTILQGVQTTRIVKLWLNKCQLGDAECQVIATELRLNTSLTSLELTDNQIG 366

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
            +G  S++EAL EN T++SL+L  N  G +    L   +     LR
Sbjct: 367 DAGALSISEALRENKTLQSLNLTNNQIGYVEETVLRHRVNQQFQLR 412


>gi|344237526|gb|EGV93629.1| Protein NLRC3 [Cricetulus griseus]
          Length = 975

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 168/307 (54%), Gaps = 8/307 (2%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           ++ ++L+ N IG++G K L   L+ N  +  L L S  +  +GAKA+A+ LK N  L  L
Sbjct: 665 IQNISLTENQIGNKGAKALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTLTSL 724

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L +NMI  +G   +AEAL+ N TI  L L  N  G  GA  +A  L+ NKSL+EL    
Sbjct: 725 GLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELMFSS 784

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLD--IGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           N+IGD G  AL   L   +G L  LD  +   ++S     H++  +   +S     L  N
Sbjct: 785 NTIGDGGAMALAEALKGNQG-LENLDSSLDQTAVSRTWDSHISSALSFIRS-----LQSN 838

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            I + G   +  AL  N+T+++++L  N I +  A A+ + L+ N  +T+LDL    IG 
Sbjct: 839 AISNTGVAVLMRALCVNQTLSSLNLQWNFIQAGAARALGQALQLNRTLTTLDLQVASIGT 898

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
            GA+AL E L  +  +  L L    IG +GA+ +A+ L+ N+++  L+L+ N + + GA+
Sbjct: 899 QGAQALGEALAVNRTLEILDLRGNDIGVAGAKALANALKLNSSLRRLNLQGNPIGESGAR 958

Query: 518 CLAQSFK 524
            ++++ K
Sbjct: 959 MISEAIK 965



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 174/355 (49%), Gaps = 27/355 (7%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
           S+  L     +L    S+ +    F D  +  L   L G +   + +S   N I   G K
Sbjct: 622 SQSVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIQNISLTENQIGNKGAK 681

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L  N +L TL+L  N IG +G K L D L  N  +  L L S  ++D G   +AE
Sbjct: 682 ALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTLTSLGLQSNMIKDNGVMCMAE 741

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L +N  + +L+L  N+I  +G   +A+AL +N +++ L  + N  G  GA ALA+ L+G
Sbjct: 742 ALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELMFSSNTIGDGGAMALAEALKG 801

Query: 329 NKSLREL-------------------------HLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           N+ L  L                          L  N+I + G+  LM  L   +  L+ 
Sbjct: 802 NQGLENLDSSLDQTAVSRTWDSHISSALSFIRSLQSNAISNTGVAVLMRALCVNQ-TLSS 860

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L++  N I A  A  + + ++  ++L  ++L +  IG +GA+ + +AL  NRT+  +DL 
Sbjct: 861 LNLQWNFIQAGAARALGQALQLNRTLTTLDLQVASIGTQGAQALGEALAVNRTLEILDLR 920

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           GN+I   GA A+A  LK NS +  L+L  NPIG  GA+ +SE +K +    T+++
Sbjct: 921 GNDIGVAGAKALANALKLNSSLRRLNLQGNPIGESGARMISEAIKTNAPTCTVEM 975



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 153/310 (49%), Gaps = 27/310 (8%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + L  N I   G  +LA +LL N ++ +L L  N  G  GA ALA  L+ N++L  L L 
Sbjct: 668 ISLTENQIGNKGAKALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTLTSLGLQ 727

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N I D G+  +   L S +  +++L +  N I   GA  +A+ +K  KSL  +    N 
Sbjct: 728 SNMIKDNGVMCMAEALVSNQ-TISILQLQKNLIGPTGAQRMADALKQNKSLKELMFSSNT 786

Query: 399 IGDEGAEKIADALKQNRTITTID-------------------------LGGNNIHSKGAS 433
           IGD GA  +A+ALK N+ +  +D                         L  N I + G +
Sbjct: 787 IGDGGAMALAEALKGNQGLENLDSSLDQTAVSRTWDSHISSALSFIRSLQSNAISNTGVA 846

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            + R L  N  ++SL+L +N I A  A+AL + L+ +  + TL L    IG  GA+ + +
Sbjct: 847 VLMRALCVNQTLSSLNLQWNFIQAGAARALGQALQLNRTLTTLDLQVASIGTQGAQALGE 906

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L  N T+ ILDLR N +   GAK LA + K +N +L  ++L  N I + GA  I++A+K
Sbjct: 907 ALAVNRTLEILDLRGNDIGVAGAKALANALK-LNSSLRRLNLQGNPIGESGARMISEAIK 965

Query: 554 ANEDVAVTSL 563
            N       +
Sbjct: 966 TNAPTCTVEM 975



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 4/274 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           +  + L +  K+ R  +S+ +      D G+  +AE+L  NQT   +    N I   G +
Sbjct: 706 QGAKALADALKKNRTLTSLGLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTGAQ 765

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                L+ N +LK L  S N IGD G   L + L  N G+E L  SS+D         + 
Sbjct: 766 RMADALKQNKSLKELMFSSNTIGDGGAMALAEALKGNQGLENLD-SSLDQTAVSRTWDSH 824

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +    S +R L+  +N I  +G   L  AL  N T+ SL+L  N+  A  A AL + L+ 
Sbjct: 825 ISSALSFIRSLQ--SNAISNTGVAVLMRALCVNQTLSSLNLQWNFIQAGAARALGQALQL 882

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N++L  L L   SIG +G +AL   L+  +  L +LD+  N I   GA  +A  +K   S
Sbjct: 883 NRTLTTLDLQVASIGTQGAQALGEALAVNR-TLEILDLRGNDIGVAGAKALANALKLNSS 941

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           L  +NL  N IG+ GA  I++A+K N    T+++
Sbjct: 942 LRRLNLQGNPIGESGARMISEAIKTNAPTCTVEM 975



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 28/295 (9%)

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           LL+ S IRS     N    L  + L   L      + L L  N   D  +  L S LS +
Sbjct: 604 LLQLSDIRSQE--ANLSLCLSQSVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGK 661

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
             ++  + +  N I  KGA  +A  +   +SL+ ++L  N IG +GA+ +ADALK+NRT+
Sbjct: 662 DCRIQNISLTENQIGNKGAKALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTL 721

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           T++ L  N I   G   +A  L  N  I+ L L  N IG  GA+ +++ LK + ++  L 
Sbjct: 722 TSLGLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELM 781

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILD-------------------------LRANGLR 512
                IG  GA  +A+ L+ N  +  LD                         L++N + 
Sbjct: 782 FSSNTIGDGGAMALAEALKGNQGLENLDSSLDQTAVSRTWDSHISSALSFIRSLQSNAIS 841

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           + G   L ++   VN+ L+S++L +N I+   A A+ QAL+ N  +    L +A+
Sbjct: 842 NTGVAVLMRAL-CVNQTLSSLNLQWNFIQAGAARALGQALQLNRTLTTLDLQVAS 895


>gi|330791723|ref|XP_003283941.1| hypothetical protein DICPUDRAFT_45148 [Dictyostelium purpureum]
 gi|325086099|gb|EGC39494.1| hypothetical protein DICPUDRAFT_45148 [Dictyostelium purpureum]
          Length = 686

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 223/451 (49%), Gaps = 13/451 (2%)

Query: 153 TLNEFAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           +L EF+  L+   +   +D+S      E    LA  L  N + E ++ + N + + G   
Sbjct: 218 SLGEFSDILKTNFSLKHLDLSSNQINGEAATKLANCLKCNHSIETLNLSFNDMKSVGSVQ 277

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
               L+ N ++ +LN S N   +EG     +++ DN  +  L LSS  +  E    IAE 
Sbjct: 278 IANCLKVNQSIASLNFSSNFPDEEGTHAFAEMIRDNHSLTSLNLSSNRISFERVPLIAEA 337

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL--E 327
           L  N  L  L L  N+I+  G   +A  L +NS++  ++ + N    +GA  +AK +   
Sbjct: 338 LAKNKTLLHLNLQRNLIEGRGSEFIAHGLSKNSSLTDINFSSNKFSNIGATLIAKAIAFN 397

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNC 386
            N  +  + L+ NSI   G  A  S +      +  LD+  N I +     +++ ++ N 
Sbjct: 398 PNTKITNIDLNSNSIESSGAIA-FSDIVLYNKSVTNLDLSINWIDSSALMDISQAFLNNS 456

Query: 387 K-SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             S+  I+L  N I + GA  +  AL  N ++  ++L  NN+  +GA  +++ ++ NS +
Sbjct: 457 NSSIKSIDLSNNTICERGAGYLGKALLSNCSLKHLNLFCNNLEKQGAIELSKSIEMNSTL 516

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           TSL+L+ N IG  G ++LS  L  + +I ++ L    I   GA+++  +L  NNTI  LD
Sbjct: 517 TSLELSSNLIGDGGLESLSAALIKNKSIVSISLSQSSITVEGAQYLVPLLEKNNTIEFLD 576

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           L  N +   GA+ +++  K  N+ +TS+DL+ N I D GA AI++    N    +  L+L
Sbjct: 577 LSYNSIGPIGAQKISEPLK-TNKTITSLDLSSNSIGDQGASAISEIFPLNS--TLKRLSL 633

Query: 566 ANNFLTKFGQSALTDAKDLVYEMSEKEVNIF 596
            NN +   G  ++ D  +L+   S   +N+ 
Sbjct: 634 YNNKIGSIGAISIVD--NLIKNHSLYSINLL 662



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 191/387 (49%), Gaps = 11/387 (2%)

Query: 128 MNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG 187
           +N S+ A  N  S F  +   E      E  ++  + +S+++S      E +  +AE+L 
Sbjct: 284 VNQSI-ASLNFSSNFPDE---EGTHAFAEMIRDNHSLTSLNLSSNRISFERVPLIAEALA 339

Query: 188 YNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV--DN 245
            N+T   ++   N I   G +     L  N +L  +N S N   + G   +   +    N
Sbjct: 340 KNKTLLHLNLQRNLIEGRGSEFIAHGLSKNSSLTDINFSSNKFSNIGATLIAKAIAFNPN 399

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL--ENST 303
             +  + L+S  +   GA A ++++  N  +  L+L+ N ID S    +++A L   NS+
Sbjct: 400 TKITNIDLNSNSIESSGAIAFSDIVLYNKSVTNLDLSINWIDSSALMDISQAFLNNSNSS 459

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           I+S+ L+ N     GA  L K L  N SL+ L+L  N++  +G   L   +      L  
Sbjct: 460 IKSIDLSNNTICERGAGYLGKALLSNCSLKHLNLFCNNLEKQGAIELSKSI-EMNSTLTS 518

Query: 364 LDIGNNSISAKGAFHV-AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           L++ +N I   G   + A  IKN KS++ I+L  + I  EGA+ +   L++N TI  +DL
Sbjct: 519 LELSSNLIGDGGLESLSAALIKN-KSIVSISLSQSSITVEGAQYLVPLLEKNNTIEFLDL 577

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N+I   GA  I+  LK N  ITSLDL+ N IG  GA A+SE+   +  +  L L   +
Sbjct: 578 SYNSIGPIGAQKISEPLKTNKTITSLDLSSNSIGDQGASAISEIFPLNSTLKRLSLYNNK 637

Query: 483 IGASGAEFVADMLRYNNTISILDLRAN 509
           IG+ GA  + D L  N+++  ++L AN
Sbjct: 638 IGSIGAISIVDNLIKNHSLYSINLLAN 664



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 154/303 (50%), Gaps = 5/303 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAE--EVSFAANGITAAGIKAFDGVLQSNIAL 220
           + + ++ S   F + G   +A+++ +N   +   +   +N I ++G  AF  ++  N ++
Sbjct: 371 SLTDINFSSNKFSNIGATLIAKAIAFNPNTKITNIDLNSNSIESSGAIAFSDIVLYNKSV 430

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNA--GVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             L+LS N I    +  +    ++N+   ++ + LS+  + + GA  + + L +N  L+ 
Sbjct: 431 TNLDLSINWIDSSALMDISQAFLNNSNSSIKSIDLSNNTICERGAGYLGKALLSNCSLKH 490

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L  N ++  G   L++++  NST+ SL L+ N  G  G  +L+  L  NKS+  + L 
Sbjct: 491 LNLFCNNLEKQGAIELSKSIEMNSTLTSLELSSNLIGDGGLESLSAALIKNKSIVSISLS 550

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            +SI  EG + L+  L  +   +  LD+  NSI   GA  ++E +K  K++  ++L  N 
Sbjct: 551 QSSITVEGAQYLVPLLE-KNNTIEFLDLSYNSIGPIGAQKISEPLKTNKTITSLDLSSNS 609

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD+GA  I++    N T+  + L  N I S GA +I   L  N  + S++L  N I + 
Sbjct: 610 IGDQGASAISEIFPLNSTLKRLSLYNNKIGSIGAISIVDNLIKNHSLYSINLLANRIDSS 669

Query: 459 GAK 461
             K
Sbjct: 670 ILK 672



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 99/190 (52%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++   N   +G   L++S+  N T   +  ++N I   G+++    L  N ++ +++LS
Sbjct: 491 LNLFCNNLEKQGAIELSKSIEMNSTLTSLELSSNLIGDGGLESLSAALIKNKSIVSISLS 550

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            + I  EG + L  +L  N  +E L LS   +   GA+ I+E LK N  +  L+L++N I
Sbjct: 551 QSSITVEGAQYLVPLLEKNNTIEFLDLSYNSIGPIGAQKISEPLKTNKTITSLDLSSNSI 610

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G ++++E    NST++ L L  N  G++GA ++   L  N SL  ++L  N I    
Sbjct: 611 GDQGASAISEIFPLNSTLKRLSLYNNKIGSIGAISIVDNLIKNHSLYSINLLANRIDSSI 670

Query: 347 IRALMSGLSS 356
           ++ ++  L S
Sbjct: 671 LKRILKRLES 680


>gi|320165772|gb|EFW42671.1| hypothetical protein CAOG_07803 [Capsaspora owczarzaki ATCC 30864]
          Length = 664

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/251 (40%), Positives = 143/251 (56%), Gaps = 4/251 (1%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L    IGDE  +A+   L   K  L  LD+ NN I   GA   AE +K  K+L  I L
Sbjct: 25  LSLERRQIGDEEAKAIAEALKVNK-TLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRL 83

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N IG+ GA+ IA ALK N T+ T+ LG N +   GA AIA  L+ N+ +  L L  N 
Sbjct: 84  WANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQ 143

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA+A++E LK +  + TL L   QIG  GA+ +A+ L+ N T++ L L  N + D 
Sbjct: 144 IGDVGAQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGDV 203

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           GA+ +A++ + VN  +T ++L  N I D GA  IA ALK N+   +T L L+ NFLT  G
Sbjct: 204 GAQAIAEALE-VNTTVTHLELDQNHIGDVGANTIAAALKVNK--TLTLLYLSQNFLTNTG 260

Query: 575 QSALTDAKDLV 585
            +AL    +++
Sbjct: 261 INALRQTGNII 271



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 136/291 (46%), Gaps = 33/291 (11%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           R  GDE    +AE+L  N+T   +    N I   G  AF   L+ N AL  + L  N IG
Sbjct: 30  RQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRLWANQIG 89

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
           + G + +   L  N  +  L L    L D GA+AIAE L+ N+ L  L L  N I   G 
Sbjct: 90  EVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQIGDVGA 149

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            ++AEAL  N T+ +L L  N  G +GA A+A+ L+ NK+L EL L  N IGD G +A  
Sbjct: 150 QAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGDVGAQA-- 207

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
                                      +AE ++   ++  + L  N IGD GA  IA AL
Sbjct: 208 ---------------------------IAEALEVNTTVTHLELDQNHIGDVGANTIAAAL 240

Query: 412 KQNRTITTIDLGGNNIHSKGASAIAR----VLKDNSVITSLDLAYNPIGAD 458
           K N+T+T + L  N + + G +A+ +    +   NS    LD    P  AD
Sbjct: 241 KVNKTLTLLYLSQNFLTNTGINALRQTGNIICTFNSARGRLDQQRTPSPAD 291



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 117/240 (48%), Gaps = 8/240 (3%)

Query: 143 TGKLFRESKQTLNEFAKEL-------RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           +G L  E +Q  +E AK +       +  + +D+     GD G    AE+L  N+   E+
Sbjct: 22  SGGLSLERRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEI 81

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
              AN I   G +A    L++N  L TL L  N +GD G + + + L  N  + +L L  
Sbjct: 82  RLWANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRE 141

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + D GA+AIAE LK N  L  L L  N I   G  ++AEAL  N T+  L L  N  G
Sbjct: 142 NQIGDVGAQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIG 201

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
            +GA A+A+ LE N ++  L L  N IGD G   + + L   K  L +L +  N ++  G
Sbjct: 202 DVGAQAIAEALEVNTTVTHLELDQNHIGDVGANTIAAALKVNK-TLTLLYLSQNFLTNTG 260


>gi|320169702|gb|EFW46601.1| hypothetical protein CAOG_04559 [Capsaspora owczarzaki ATCC 30864]
          Length = 391

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 173/340 (50%), Gaps = 15/340 (4%)

Query: 154 LNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           +NE  +EL      A   +D+S           +AE+L  N T   +    N I   G++
Sbjct: 4   MNELQRELYDIVKNATEELDLSEERIDVAAAQAIAEALKVNTTLTWLKLEKNQIGDLGVQ 63

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L+ N  L  L+L  N IGD G K L + L  +  +  L L++  + + GA+AI E
Sbjct: 64  AIAEALKVNTTLTYLDLDSNQIGDAGAKVLAEALKGHTTLTGLGLNTSQIGEVGAQAICE 123

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK NS L +L+L+ N I  +G  ++A+AL  N+T+  L+L+GN  G  GA A+A+ L+ 
Sbjct: 124 ALKVNSTLTMLDLDANQIGDAGAQAIAQALKVNTTLTWLNLDGNQIGDAGAQAIAQALKV 183

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L++L L  N IGD G +A+   L   K +L  L +  N I   GA  +A  +K   +
Sbjct: 184 NSTLKKLFLDANQIGDAGAQAIGEALKVNK-RLIDLRLSENHIGDAGANTIAAALKVNTT 242

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L W+NL  N IG+ GAE IA+ALK N T+  + L  N I   GA  +A  L+ N+ +T L
Sbjct: 243 LTWLNLSENQIGNVGAEAIAEALKVNTTLAVLGLHTNEIGDDGACELADALEVNTTMTKL 302

Query: 449 DLAYNPIGADGAKALSEV--------LKFHGNINTLKLGW 480
            L  N +   G  AL +V        L F   I  L   W
Sbjct: 303 HLDRNCMDY-GRSALLDVREDNCRLELTFDDQIGCLAFIW 341



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/297 (38%), Positives = 162/297 (54%), Gaps = 3/297 (1%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           +V NA  E L LS   +    A+AIAE LK N+ L  L+L  N I   G  ++AEAL  N
Sbjct: 14  IVKNA-TEELDLSEERIDVAAAQAIAEALKVNTTLTWLKLEKNQIGDLGVQAIAEALKVN 72

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           +T+  L L+ N  G  GA  LA+ L+G+ +L  L L+ + IG+ G +A+   L      L
Sbjct: 73  TTLTYLDLDSNQIGDAGAKVLAEALKGHTTLTGLGLNTSQIGEVGAQAICEALKVNS-TL 131

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
            +LD+  N I   GA  +A+ +K   +L W+NL  N IGD GA+ IA ALK N T+  + 
Sbjct: 132 TMLDLDANQIGDAGAQAIAQALKVNTTLTWLNLDGNQIGDAGAQAIAQALKVNSTLKKLF 191

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I   GA AI   LK N  +  L L+ N IG  GA  ++  LK +  +  L L   
Sbjct: 192 LDANQIGDAGAQAIGEALKVNKRLIDLRLSENHIGDAGANTIAAALKVNTTLTWLNLSEN 251

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
           QIG  GAE +A+ L+ N T+++L L  N + D+GA  LA + + VN  +T + L  N
Sbjct: 252 QIGNVGAEAIAEALKVNTTLAVLGLHTNEIGDDGACELADALE-VNTTMTKLHLDRN 307



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/265 (38%), Positives = 149/265 (56%), Gaps = 4/265 (1%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N +L  L L  N IGD G++A+   L      L  LD+ +N I   GA  +AE +K 
Sbjct: 41  LKVNTTLTWLKLEKNQIGDLGVQAIAEALKVNT-TLTYLDLDSNQIGDAGAKVLAEALKG 99

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             +L  + L  + IG+ GA+ I +ALK N T+T +DL  N I   GA AIA+ LK N+ +
Sbjct: 100 HTTLTGLGLNTSQIGEVGAQAICEALKVNSTLTMLDLDANQIGDAGAQAIAQALKVNTTL 159

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           T L+L  N IG  GA+A+++ LK +  +  L L   QIG +GA+ + + L+ N  +  L 
Sbjct: 160 TWLNLDGNQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAIGEALKVNKRLIDLR 219

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           L  N + D GA  +A + KV N  LT ++L+ N+I + GA AIA+ALK N  +AV  L L
Sbjct: 220 LSENHIGDAGANTIAAALKV-NTTLTWLNLSENQIGNVGAEAIAEALKVNTTLAV--LGL 276

Query: 566 ANNFLTKFGQSALTDAKDLVYEMSE 590
             N +   G   L DA ++   M++
Sbjct: 277 HTNEIGDDGACELADALEVNTTMTK 301



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 111/193 (57%), Gaps = 1/193 (0%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+    I    A  +AE +K   +L W+ L  N IGD G + IA+ALK N T+T +DL 
Sbjct: 22  LDLSEERIDVAAAQAIAEALKVNTTLTWLKLEKNQIGDLGVQAIAEALKVNTTLTYLDLD 81

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I   GA  +A  LK ++ +T L L  + IG  GA+A+ E LK +  +  L L   QI
Sbjct: 82  SNQIGDAGAKVLAEALKGHTTLTGLGLNTSQIGEVGAQAICEALKVNSTLTMLDLDANQI 141

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G +GA+ +A  L+ N T++ L+L  N + D GA+ +AQ+ K VN  L  + L  N+I D 
Sbjct: 142 GDAGAQAIAQALKVNTTLTWLNLDGNQIGDAGAQAIAQALK-VNSTLKKLFLDANQIGDA 200

Query: 544 GAFAIAQALKANE 556
           GA AI +ALK N+
Sbjct: 201 GAQAIGEALKVNK 213



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 107/220 (48%), Gaps = 4/220 (1%)

Query: 135 GTNLLSGF---TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT 191
           G   L+G    T ++     Q + E  K     + +D+     GD G   +A++L  N T
Sbjct: 99  GHTTLTGLGLNTSQIGEVGAQAICEALKVNSTLTMLDLDANQIGDAGAQAIAQALKVNTT 158

Query: 192 AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
              ++   N I  AG +A    L+ N  LK L L  N IGD G + + + L  N  +  L
Sbjct: 159 LTWLNLDGNQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAIGEALKVNKRLIDL 218

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           +LS   + D GA  IA  LK N+ L  L L+ N I   G  ++AEAL  N+T+  L L+ 
Sbjct: 219 RLSENHIGDAGANTIAAALKVNTTLTWLNLSENQIGNVGAEAIAEALKVNTTLAVLGLHT 278

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           N  G  GA  LA  LE N ++ +LHL  N + D G  AL+
Sbjct: 279 NEIGDDGACELADALEVNTTMTKLHLDRNCM-DYGRSALL 317


>gi|406943494|gb|EKD75477.1| hypothetical protein ACD_44C00117G0002 [uncultured bacterium]
          Length = 1248

 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 172/334 (51%), Gaps = 3/334 (0%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+  +N  D     L+E+L  N TA  V    N I   G KA  G L+ N ++K L+L 
Sbjct: 683  LDLREKNIDDAKAIALSETLKTNHTAMAVLLEKNKIGPQGAKALAGALKVNQSVKVLDLD 742

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N IGD G + L ++L  N  +  L L    + + G +A+AE LK N  L+ L L NN +
Sbjct: 743  HNSIGDAGAEALAEVLTTNDSITTLYLKHNLINNGGVQALAEALKVNKTLQELNLGNNYV 802

Query: 287  DYSGFTSL-AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
              +  +SL AEAL +N+T++ L+LN +    LGA+ L + L  N +L EL L  N +GD 
Sbjct: 803  MDTKTSSLFAEALKQNNTLQKLNLNKSGLHELGAHILTEALSTNHTLTELSLRRNGLGDI 862

Query: 346  GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
            G   +++ +      L  LD+ +N IS   A  +A  +    +L  +NL  N +    A 
Sbjct: 863  G-GLIIAKVLQVNSTLKKLDLSDNIISDVSAISIARTLITNHTLQELNLANNFLNTATAT 921

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             IADALK N+T+  +DL    I+      IA  LK N  +  L+LA N IG+   +A++E
Sbjct: 922  SIADALKTNQTLQKLDLENTRINLGDVIIIADALKINHTLQELNLANNKIGSFSIRAIAE 981

Query: 466  VLKFHGNINTLKLGWCQI-GASGAEFVADMLRYN 498
             LK +  +  L L   Q+   +    + D+L+ N
Sbjct: 982  TLKTNYTLQKLNLESTQLTDKTLLSPIEDLLKRN 1015



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 144/268 (53%), Gaps = 5/268 (1%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A+AL   L  N  ++ +H   +S+ D G++A+   L   +  +    + +NSIS + A  
Sbjct: 144 AHALTDALCDNPHIKTIHFEHHSMKDTGMKAIAKILKVNQT-ITTFYLDSNSISDEDART 202

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE IK  +++  + +  N I D G + IA+ALK+NRTI T+    N+I   G       
Sbjct: 203 IAEAIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIKTVHFDNNSISDAGMQTFTEA 262

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK N  IT+L L ++       +A++E LK + +I TL+L +  +G +G + +A++LR N
Sbjct: 263 LKMNQSITTLHLEHSSRSDMDIQAIAETLKVNHSIKTLRLSYTSLGNAGMQAIAEILRNN 322

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           ++I+ L L    + D  AK +A++   +N+ L ++DL+ N I +     +A  L+ N   
Sbjct: 323 DSITTLYLELKSISDTDAKTIAEALS-INKTLKTLDLSKNSIGETALVHLAVELETNR-- 379

Query: 559 AVTSLNLANNF-LTKFGQSALTDAKDLV 585
            +T+LNL   +  T   + AL   K L+
Sbjct: 380 TLTNLNLKPPYSYTPSYRDALEKVKKLL 407



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 163/334 (48%), Gaps = 2/334 (0%)

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L+L    I D     L + L  N     + L    +  +GAKA+A  LK N  ++VL+L+
Sbjct: 683  LDLREKNIDDAKAIALSETLKTNHTAMAVLLEKNKIGPQGAKALAGALKVNQSVKVLDLD 742

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +N I  +G  +LAE L  N +I +L+L  N     G  ALA+ L+ NK+L+EL+L  N +
Sbjct: 743  HNSIGDAGAEALAEVLTTNDSITTLYLKHNLINNGGVQALAEALKVNKTLQELNLGNNYV 802

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
             D    +L +    +   L  L++  + +   GA  + E +    +L  ++L  N +GD 
Sbjct: 803  MDTKTSSLFAEALKQNNTLQKLNLNKSGLHELGAHILTEALSTNHTLTELSLRRNGLGDI 862

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            G   IA  L+ N T+  +DL  N I    A +IAR L  N  +  L+LA N +    A +
Sbjct: 863  GGLIIAKVLQVNSTLKKLDLSDNIISDVSAISIARTLITNHTLQELNLANNFLNTATATS 922

Query: 463  LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
            +++ LK +  +  L L   +I       +AD L+ N+T+  L+L  N +     + +A++
Sbjct: 923  IADALKTNQTLQKLDLENTRINLGDVIIIADALKINHTLQELNLANNKIGSFSIRAIAET 982

Query: 523  FKVVNEALTSIDLAFNEIRDDGAFA-IAQALKAN 555
             K  N  L  ++L   ++ D    + I   LK N
Sbjct: 983  LK-TNYTLQKLNLESTQLTDKTLLSPIEDLLKRN 1015



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 136/268 (50%), Gaps = 13/268 (4%)

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L  N  +KT++   + + D G+K +  IL  N  +    L S  + DE A+ IAE
Sbjct: 146 ALTDALCDNPHIKTIHFEHHSMKDTGMKAIAKILKVNQTITTFYLDSNSISDEDARTIAE 205

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            +K N  +  L +  N I  +G  ++AEAL EN TI+++H + N     G     + L+ 
Sbjct: 206 AIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIKTVHFDNNSISDAGMQTFTEALKM 265

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGL----SSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           N+S+  LHL  +S  D  I+A+   L    S +  +L+   +GN  + A     +AE ++
Sbjct: 266 NQSITTLHLEHSSRSDMDIQAIAETLKVNHSIKTLRLSYTSLGNAGMQA-----IAEILR 320

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           N  S+  + L +  I D  A+ IA+AL  N+T+ T+DL  N+I       +A  L+ N  
Sbjct: 321 NNDSITTLYLELKSISDTDAKTIAEALSINKTLKTLDLSKNSIGETALVHLAVELETNRT 380

Query: 445 ITSLDL----AYNPIGADGAKALSEVLK 468
           +T+L+L    +Y P   D  + + ++L+
Sbjct: 381 LTNLNLKPPYSYTPSYRDALEKVKKLLE 408



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 149/305 (48%), Gaps = 5/305 (1%)

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +L+L    ID +   +L+E L  N T  ++ L  N  G  GA ALA  L+ N+S++ L L
Sbjct: 682 ILDLREKNIDDAKAIALSETLKTNHTAMAVLLEKNKIGPQGAKALAGALKVNQSVKVLDL 741

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             NSIGD G  AL   L++    +  L + +N I+  G   +AE +K  K+L  +NL  N
Sbjct: 742 DHNSIGDAGAEALAEVLTTNDS-ITTLYLKHNLINNGGVQALAEALKVNKTLQELNLGNN 800

Query: 398 DIGDEGAEKI-ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
            + D     + A+ALKQN T+  ++L  + +H  GA  +   L  N  +T L L  N +G
Sbjct: 801 YVMDTKTSSLFAEALKQNNTLQKLNLNKSGLHELGAHILTEALSTNHTLTELSLRRNGLG 860

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G   +++VL+ +  +  L L    I    A  +A  L  N+T+  L+L  N L    A
Sbjct: 861 DIGGLIIAKVLQVNSTLKKLDLSDNIISDVSAISIARTLITNHTLQELNLANNFLNTATA 920

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 576
             +A + K  N+ L  +DL    I       IA ALK N    +  LNLANN +  F   
Sbjct: 921 TSIADALK-TNQTLQKLDLENTRINLGDVIIIADALKINH--TLQELNLANNKIGSFSIR 977

Query: 577 ALTDA 581
           A+ + 
Sbjct: 978 AIAET 982



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 29/285 (10%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN     I D     L D L DN  ++ +      ++D G KAIA++LK N  +    L+
Sbjct: 132 LNPGSIEINDTIAHALTDALCDNPHIKTIHFEHHSMKDTGMKAIAKILKVNQTITTFYLD 191

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I      ++AEA+  N TI +L++ GN     G  A+A+ L+ N++++ +H   NSI
Sbjct: 192 SNSISDEDARTIAEAIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIKTVHFDNNSI 251

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            D G++                                E +K  +S+  ++L  +   D 
Sbjct: 252 SDAGMQTF-----------------------------TEALKMNQSITTLHLEHSSRSDM 282

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + IA+ LK N +I T+ L   ++ + G  AIA +L++N  IT+L L    I    AK 
Sbjct: 283 DIQAIAETLKVNHSIKTLRLSYTSLGNAGMQAIAEILRNNDSITTLYLELKSISDTDAKT 342

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           ++E L  +  + TL L    IG +    +A  L  N T++ L+L+
Sbjct: 343 IAEALSINKTLKTLDLSKNSIGETALVHLAVELETNRTLTNLNLK 387



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 127/235 (54%), Gaps = 6/235 (2%)

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
            +LD+   +I    A  ++E +K   + + + L  N IG +GA+ +A ALK N+++  +D
Sbjct: 681 VILDLREKNIDDAKAIALSETLKTNHTAMAVLLEKNKIGPQGAKALAGALKVNQSVKVLD 740

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N+I   GA A+A VL  N  IT+L L +N I   G +AL+E LK +  +  L LG  
Sbjct: 741 LDHNSIGDAGAEALAEVLTTNDSITTLYLKHNLINNGGVQALAEALKVNKTLQELNLGNN 800

Query: 482 QI-GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            +     +   A+ L+ NNT+  L+L  +GL + GA  L ++    N  LT + L  N +
Sbjct: 801 YVMDTKTSSLFAEALKQNNTLQKLNLNKSGLHELGAHILTEALS-TNHTLTELSLRRNGL 859

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 595
            D G   IA+ L+ N    +  L+L++N ++    SA++ A+ L+   + +E+N+
Sbjct: 860 GDIGGLIIAKVLQVNS--TLKKLDLSDNIISDV--SAISIARTLITNHTLQELNL 910



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 103/189 (54%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  +T+ E  K  +  +++ + G +  D G+  +AE+L  N+T + V F  N I+ AG++
Sbjct: 198 EDARTIAEAIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIKTVHFDNNSISDAGMQ 257

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            F   L+ N ++ TL+L  +   D  ++ + + L  N  ++ L+LS   L + G +AIAE
Sbjct: 258 TFTEALKMNQSITTLHLEHSSRSDMDIQAIAETLKVNHSIKTLRLSYTSLGNAGMQAIAE 317

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +L+NN  +  L L    I  +   ++AEAL  N T+++L L+ N  G      LA  LE 
Sbjct: 318 ILRNNDSITTLYLELKSISDTDAKTIAEALSINKTLKTLDLSKNSIGETALVHLAVELET 377

Query: 329 NKSLRELHL 337
           N++L  L+L
Sbjct: 378 NRTLTNLNL 386



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 29/257 (11%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++     +  D G+  +A+ L  NQT       +N I+    +     +++N  + TL +
Sbjct: 159 TIHFEHHSMKDTGMKAIAKILKVNQTITTFYLDSNSISDEDARTIAEAIKTNQTITTLYI 218

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            GN I D G+                            +AIAE LK N  ++ +  +NN 
Sbjct: 219 KGNSISDTGI----------------------------QAIAEALKENRTIKTVHFDNNS 250

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I  +G  +  EAL  N +I +LHL  +    +   A+A+ L+ N S++ L L   S+G+ 
Sbjct: 251 ISDAGMQTFTEALKMNQSITTLHLEHSSRSDMDIQAIAETLKVNHSIKTLRLSYTSLGNA 310

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G++A+   L +    +  L +   SIS   A  +AE +   K+L  ++L  N IG+    
Sbjct: 311 GMQAIAEILRNNDS-ITTLYLELKSISDTDAKTIAEALSINKTLKTLDLSKNSIGETALV 369

Query: 406 KIADALKQNRTITTIDL 422
            +A  L+ NRT+T ++L
Sbjct: 370 HLAVELETNRTLTNLNL 386



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 94/197 (47%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  ++  +   +  DE    +AE++  NQT   +    N I+  GI+A    L+ N  +K
Sbjct: 183 QTITTFYLDSNSISDEDARTIAEAIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIK 242

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           T++   N I D G++   + L  N  +  L L      D   +AIAE LK N  ++ L L
Sbjct: 243 TVHFDNNSISDAGMQTFTEALKMNQSITTLHLEHSSRSDMDIQAIAETLKVNHSIKTLRL 302

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +   +  +G  ++AE L  N +I +L+L         A  +A+ L  NK+L+ L L  NS
Sbjct: 303 SYTSLGNAGMQAIAEILRNNDSITTLYLELKSISDTDAKTIAEALSINKTLKTLDLSKNS 362

Query: 342 IGDEGIRALMSGLSSRK 358
           IG+  +  L   L + +
Sbjct: 363 IGETALVHLAVELETNR 379



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 3/204 (1%)

Query: 157  FAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            FA+ L+       ++++     + G   L E+L  N T  E+S   NG+   G      V
Sbjct: 811  FAEALKQNNTLQKLNLNKSGLHELGAHILTEALSTNHTLTELSLRRNGLGDIGGLIIAKV 870

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            LQ N  LK L+LS N I D     +   L+ N  ++ L L++  L    A +IA+ LK N
Sbjct: 871  LQVNSTLKKLDLSDNIISDVSAISIARTLITNHTLQELNLANNFLNTATATSIADALKTN 930

Query: 274  SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
              L+ L+L N  I+      +A+AL  N T++ L+L  N  G+    A+A+ L+ N +L+
Sbjct: 931  QTLQKLDLENTRINLGDVIIIADALKINHTLQELNLANNKIGSFSIRAIAETLKTNYTLQ 990

Query: 334  ELHLHGNSIGDEGIRALMSGLSSR 357
            +L+L    + D+ + + +  L  R
Sbjct: 991  KLNLESTQLTDKTLLSPIEDLLKR 1014



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 1/166 (0%)

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           +I D  A  + DAL  N  I TI    +++   G  AIA++LK N  IT+  L  N I  
Sbjct: 138 EINDTIAHALTDALCDNPHIKTIHFEHHSMKDTGMKAIAKILKVNQTITTFYLDSNSISD 197

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           + A+ ++E +K +  I TL +    I  +G + +A+ L+ N TI  +    N + D G +
Sbjct: 198 EDARTIAEAIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIKTVHFDNNSISDAGMQ 257

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
              ++ K +N+++T++ L  +   D    AIA+ LK N  +    L
Sbjct: 258 TFTEALK-MNQSITTLHLEHSSRSDMDIQAIAETLKVNHSIKTLRL 302



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 4/187 (2%)

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           E    ++++N     +DL   NI    A A++  LK N    ++ L  N IG  GAKAL+
Sbjct: 668 ENHTSSIEENNPEVILDLREKNIDDAKAIALSETLKTNHTAMAVLLEKNKIGPQGAKALA 727

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
             LK + ++  L L    IG +GAE +A++L  N++I+ L L+ N + + G + LA++ K
Sbjct: 728 GALKVNQSVKVLDLDHNSIGDAGAEALAEVLTTNDSITTLYLKHNLINNGGVQALAEALK 787

Query: 525 VVNEALTSIDLAFNEIRDDGAFAI-AQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            VN+ L  ++L  N + D    ++ A+ALK N    +  LNL  + L + G   LT+A  
Sbjct: 788 -VNKTLQELNLGNNYVMDTKTSSLFAEALKQNN--TLQKLNLNKSGLHELGAHILTEALS 844

Query: 584 LVYEMSE 590
             + ++E
Sbjct: 845 TNHTLTE 851



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  KE R   +V     +  D G+    E+L  NQ+   +    +  +   I+A  
Sbjct: 229 QAIAEALKENRTIKTVHFDNNSISDAGMQTFTEALKMNQSITTLHLEHSSRSDMDIQAIA 288

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N ++KTL LS   +G+ G++ + +IL +N  +  L L    + D  AK IAE L 
Sbjct: 289 ETLKVNHSIKTLRLSYTSLGNAGMQAIAEILRNNDSITTLYLELKSISDTDAKTIAEALS 348

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
            N  L+ L+L+ N I  +    LA  L  N T+ +L+L   Y 
Sbjct: 349 INKTLKTLDLSKNSIGETALVHLAVELETNRTLTNLNLKPPYS 391



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 5/158 (3%)

Query: 412 KQNRTITTIDL--GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           K++  +TT+ L  G   I+   A A+   L DN  I ++   ++ +   G KA++++LK 
Sbjct: 122 KKHSKVTTLFLNPGSIEINDTIAHALTDALCDNPHIKTIHFEHHSMKDTGMKAIAKILKV 181

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +  I T  L    I    A  +A+ ++ N TI+ L ++ N + D G + +A++ K  N  
Sbjct: 182 NQTITTFYLDSNSISDEDARTIAEAIKTNQTITTLYIKGNSISDTGIQAIAEALK-ENRT 240

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           + ++    N I D G     +ALK N+  ++T+L+L +
Sbjct: 241 IKTVHFDNNSISDAGMQTFTEALKMNQ--SITTLHLEH 276


>gi|320164298|gb|EFW41197.1| hypothetical protein CAOG_06329 [Capsaspora owczarzaki ATCC 30864]
          Length = 543

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/378 (34%), Positives = 200/378 (52%), Gaps = 37/378 (9%)

Query: 152 QTLNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
           Q +N+  +EL      A   + +SG+  GD     +AE+L  N+T  +++   N I AAG
Sbjct: 4   QYMNQKQRELYDQVKNASEGLSLSGKQIGDAEAQAIAEALKVNKTLHKLNLDRNQIGAAG 63

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            +A   ++Q N A+  L L+ N IG  G   + + L  N  +  L L    + D GA AI
Sbjct: 64  AQA---IVQVNTAVTKLMLNQNRIGGAGAHAIAEALKVNTTLTWLDLWVNQIGDAGAWAI 120

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE LK N+ L  L L+ N +  +G  ++AEAL  N+T+ SL LN N  G +GA A+A+ L
Sbjct: 121 AEALKVNTTLTWLGLHANQVGEAGAGAIAEALKVNTTLTSLGLNKNQIGDVGAGAIAEAL 180

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           + NK+L  L LH N +G+ G  A+   L            GN ++++ G           
Sbjct: 181 KVNKTLIRLGLHANQVGEAGAGAIAEALK-----------GNTTLTSLG----------- 218

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
                  L  N IGD GA  IA ALK N+T+T + L  N I   GA AIA  LK N+ +T
Sbjct: 219 -------LEFNQIGDAGACAIAAALKVNKTLTALFLNSNQIGDAGAQAIADALKVNTTMT 271

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            L L  N IG  G++A +E L+ +  +  L+L + QIG +GA  +A+ L+ N T+ +LDL
Sbjct: 272 GLYLERNQIGGAGSQAFAEALRVNKTLIKLRLEFNQIGDAGACAIAEALKVNKTVMLLDL 331

Query: 507 RANGLRDEGAKCLAQSFK 524
            +N + + G++ + ++ K
Sbjct: 332 TSNCIGNLGSQAIDEARK 349



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 181/368 (49%), Gaps = 64/368 (17%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V NA  E L LS   + D  A+AIAE LK N  L  L L+ N I  +G  ++ +    N+
Sbjct: 17  VKNAS-EGLSLSGKQIGDAEAQAIAEALKVNKTLHKLNLDRNQIGAAGAQAIVQV---NT 72

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            +  L LN N  G  GA+A+A+ L+ N +L  L L  N IGD                  
Sbjct: 73  AVTKLMLNQNRIGGAGAHAIAEALKVNTTLTWLDLWVNQIGD------------------ 114

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM-------------------------- 396
                       GA+ +AE +K   +L W+ L+                           
Sbjct: 115 -----------AGAWAIAEALKVNTTLTWLGLHANQVGEAGAGAIAEALKVNTTLTSLGL 163

Query: 397 --NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N IGD GA  IA+ALK N+T+  + L  N +   GA AIA  LK N+ +TSL L +N 
Sbjct: 164 NKNQIGDVGAGAIAEALKVNKTLIRLGLHANQVGEAGAGAIAEALKGNTTLTSLGLEFNQ 223

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA A++  LK +  +  L L   QIG +GA+ +AD L+ N T++ L L  N +   
Sbjct: 224 IGDAGACAIAAALKVNKTLTALFLNSNQIGDAGAQAIADALKVNTTMTGLYLERNQIGGA 283

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           G++  A++ + VN+ L  + L FN+I D GA AIA+ALK N+ V +  L+L +N +   G
Sbjct: 284 GSQAFAEALR-VNKTLIKLRLEFNQIGDAGACAIAEALKVNKTVML--LDLTSNCIGNLG 340

Query: 575 QSALTDAK 582
             A+ +A+
Sbjct: 341 SQAIDEAR 348



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 124/333 (37%), Positives = 184/333 (55%), Gaps = 5/333 (1%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LSG  IGD   + + + L  N  + +L L    +   GA+AI ++   N+ +  L LN
Sbjct: 24  LSLSGKQIGDAEAQAIAEALKVNKTLHKLNLDRNQIGAAGAQAIVQV---NTAVTKLMLN 80

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  ++AEAL  N+T+  L L  N  G  GA A+A+ L+ N +L  L LH N +
Sbjct: 81  QNRIGGAGAHAIAEALKVNTTLTWLDLWVNQIGDAGAWAIAEALKVNTTLTWLGLHANQV 140

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           G+ G  A+   L      L  L +  N I   GA  +AE +K  K+L+ + L+ N +G+ 
Sbjct: 141 GEAGAGAIAEALKVNT-TLTSLGLNKNQIGDVGAGAIAEALKVNKTLIRLGLHANQVGEA 199

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  IA+ALK N T+T++ L  N I   GA AIA  LK N  +T+L L  N IG  GA+A
Sbjct: 200 GAGAIAEALKGNTTLTSLGLEFNQIGDAGACAIAAALKVNKTLTALFLNSNQIGDAGAQA 259

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           +++ LK +  +  L L   QIG +G++  A+ LR N T+  L L  N + D GA  +A++
Sbjct: 260 IADALKVNTTMTGLYLERNQIGGAGSQAFAEALRVNKTLIKLRLEFNQIGDAGACAIAEA 319

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            KV N+ +  +DL  N I + G+ AI +A K N
Sbjct: 320 LKV-NKTVMLLDLTSNCIGNLGSQAIDEARKGN 351



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 134/279 (48%), Gaps = 29/279 (10%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+     GD G + +AE+L  N T   +   AN +  AG  A    L+ N  L +L
Sbjct: 102 LTWLDLWVNQIGDAGAWAIAEALKVNTTLTWLGLHANQVGEAGAGAIAEALKVNTTLTSL 161

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L+ N IG                            D GA AIAE LK N  L  L L+ 
Sbjct: 162 GLNKNQIG----------------------------DVGAGAIAEALKVNKTLIRLGLHA 193

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +  +G  ++AEAL  N+T+ SL L  N  G  GA A+A  L+ NK+L  L L+ N IG
Sbjct: 194 NQVGEAGAGAIAEALKGNTTLTSLGLEFNQIGDAGACAIAAALKVNKTLTALFLNSNQIG 253

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G +A+   L      +  L +  N I   G+   AE ++  K+L+ + L  N IGD G
Sbjct: 254 DAGAQAIADALKVNT-TMTGLYLERNQIGGAGSQAFAEALRVNKTLIKLRLEFNQIGDAG 312

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           A  IA+ALK N+T+  +DL  N I + G+ AI    K N
Sbjct: 313 ACAIAEALKVNKTVMLLDLTSNCIGNLGSQAIDEARKGN 351


>gi|320164062|gb|EFW40961.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 467

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/275 (37%), Positives = 149/275 (54%), Gaps = 30/275 (10%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L  S   L D GA+A+AE LK N+ +  L L  N I   G  ++AEAL  N T+ ++ L+
Sbjct: 19  LSWSRWQLGDAGAQALAEALKVNTTVTRLHLYENQIGDDGARAIAEALKFN-TVTAVALS 77

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G  GA A+A+ L+ NK+++EL L  N I D G +A+   L      L  LD+  N 
Sbjct: 78  QNAIGNAGAKAIAEALKTNKTVKELFLGENQISDSGAQAIAEALKVNT-TLTELDLQRNP 136

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
               GA  +A  +K   +L W++L  N IGD GA+ IA+ALK N ++TT+ LG N I   
Sbjct: 137 TGVAGARAIAAALKVTTTLTWLSLDQNQIGDTGAQAIAEALKINASVTTLGLGWNQIGDA 196

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AIA  LK N+ +TSL LAYN IG  GA+A++E LK                      
Sbjct: 197 GAQAIAEALKVNTTMTSLHLAYNEIGDAGAQAIAEALKV--------------------- 235

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
                  N+T++ LDL ANG+ + G + + +++K+
Sbjct: 236 -------NSTLTELDLYANGISNIGVQVICEAYKI 263



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/241 (40%), Positives = 142/241 (58%), Gaps = 3/241 (1%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA ALA+ L+ N ++  LHL+ N IGD+G RA+   L  +   +  + +  N+I   
Sbjct: 27  GDAGAQALAEALKVNTTVTRLHLYENQIGDDGARAIAEAL--KFNTVTAVALSQNAIGNA 84

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K  K++  + L  N I D GA+ IA+ALK N T+T +DL  N     GA A
Sbjct: 85  GAKAIAEALKTNKTVKELFLGENQISDSGAQAIAEALKVNTTLTELDLQRNPTGVAGARA 144

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK  + +T L L  N IG  GA+A++E LK + ++ TL LGW QIG +GA+ +A+ 
Sbjct: 145 IAAALKVTTTLTWLSLDQNQIGDTGAQAIAEALKINASVTTLGLGWNQIGDAGAQAIAEA 204

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L+ N T++ L L  N + D GA+ +A++ K VN  LT +DL  N I + G   I +A K 
Sbjct: 205 LKVNTTMTSLHLAYNEIGDAGAQAIAEALK-VNSTLTELDLYANGISNIGVQVICEAYKI 263

Query: 555 N 555
           N
Sbjct: 264 N 264



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 136/293 (46%), Gaps = 30/293 (10%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F K   A   +  S    GD G   LAE+L  N T   +    N I   G +A    L+ 
Sbjct: 9   FNKGKNASGELSWSRWQLGDAGAQALAEALKVNTTVTRLHLYENQIGDDGARAIAEALKF 68

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  +  + LS N IG+ G K + + L  N  V+ L L    + D GA+AIAE LK N+ L
Sbjct: 69  N-TVTAVALSQNAIGNAGAKAIAEALKTNKTVKELFLGENQISDSGAQAIAEALKVNTTL 127

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L+L  N    +G  ++A AL   +T+  L L+ N  G  GA A+A+ L+ N S+  L 
Sbjct: 128 TELDLQRNPTGVAGARAIAAALKVTTTLTWLSLDQNQIGDTGAQAIAEALKINASVTTLG 187

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N IGD G +A                             +AE +K   ++  ++L  
Sbjct: 188 LGWNQIGDAGAQA-----------------------------IAEALKVNTTMTSLHLAY 218

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           N+IGD GA+ IA+ALK N T+T +DL  N I + G   I    K N +   LD
Sbjct: 219 NEIGDAGAQAIAEALKVNSTLTELDLYANGISNIGVQVICEAYKINGMCDDLD 271


>gi|320170919|gb|EFW47818.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 801

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/304 (36%), Positives = 166/304 (54%), Gaps = 25/304 (8%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L    IGDE  K + + L  N  V  L L   D+ D GA+AIAE LK N+ L  + L 
Sbjct: 32  LDLELGQIGDEEAKAIAEALKVNNTVTELFLQENDIGDVGAQAIAEALKVNTKLTTVYLY 91

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           NN+I   G  ++AEAL  N+T+ +L+L  N  G +GA A+A+ L+ N +L+EL+L  N I
Sbjct: 92  NNLIGDVGAHAIAEALKMNTTLTTLYLGKNQIGDVGAQAIAEALKVNTTLKELYLERNFI 151

Query: 343 GDEGIRALMSGLSSRKGKLAVLD-----------IGNNSISAKGAF-----------HVA 380
            + GI+AL + + +R  KL   D           + + +  A+ +             + 
Sbjct: 152 SENGIKAL-NQVGNRSCKLWTDDQRKPSPAQLQEMASRAAQARPSVLLDQNTNQRQRQLY 210

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +KN    L+++     IGDE A+ IA+ALK N T+TT++L  N I   GA AI   LK
Sbjct: 211 DEVKNESGQLYLD--QERIGDEEAKAIAEALKVNTTLTTLNLQQNQIGDVGARAITEALK 268

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ +T+L L+ N IG  GA+A++E LK +  +  L L    IG  GA+ +A+ L+ N T
Sbjct: 269 VNTTLTTLYLSANQIGDVGAQAIAEALKVNTTLTWLFLDNNLIGDVGAQAIAEALKANKT 328

Query: 501 ISIL 504
           +  L
Sbjct: 329 LKAL 332



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 151/355 (42%), Gaps = 24/355 (6%)

Query: 146 LFRESKQTLNEFAKELR-AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           L++   Q   E   E++ A   +D+     GDE    +AE+L  N T  E+    N I  
Sbjct: 10  LYQNMNQRQRELYDEVKNANGELDLELGQIGDEEAKAIAEALKVNNTVTELFLQENDIGD 69

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +A    L+ N  L T+ L  N IGD G   + + L  N  +  L L    + D GA+
Sbjct: 70  VGAQAIAEALKVNTKLTTVYLYNNLIGDVGAHAIAEALKMNTTLTTLYLGKNQIGDVGAQ 129

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSL------------------AEALLENSTIRS 306
           AIAE LK N+ L+ L L  N I  +G  +L                  + A L+    R+
Sbjct: 130 AIAEALKVNTTLKELYLERNFISENGIKALNQVGNRSCKLWTDDQRKPSPAQLQEMASRA 189

Query: 307 LHLNGNYGGALGANALAKGL--EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
                +       N   + L  E      +L+L    IGDE  +A+   L      L  L
Sbjct: 190 AQARPSVLLDQNTNQRQRQLYDEVKNESGQLYLDQERIGDEEAKAIAEALKV-NTTLTTL 248

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           ++  N I   GA  + E +K   +L  + L  N IGD GA+ IA+ALK N T+T + L  
Sbjct: 249 NLQQNQIGDVGARAITEALKVNTTLTTLYLSANQIGDVGAQAIAEALKVNTTLTWLFLDN 308

Query: 425 NNIHSKGASAIARVLKDNSVITSL--DLAYNPIGADGAKALSEVLKFHGNINTLK 477
           N I   GA AIA  LK N  + +L  D    P  A   +  S   +    I T K
Sbjct: 309 NLIGDVGAQAIAEALKANKTLKALKTDDQRKPSPAQLQEMASRAAQVRATIPTTK 363



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 140/284 (49%), Gaps = 22/284 (7%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++AEAL  N+T+  L L  N  G +GA A+A+ L+ N  L  ++L+ N IGD G  A+  
Sbjct: 46  AIAEALKVNNTVTELFLQENDIGDVGAQAIAEALKVNTKLTTVYLYNNLIGDVGAHAIAE 105

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  L +G N I   GA  +AE +K   +L  + L  N I + G + +     
Sbjct: 106 ALKM-NTTLTTLYLGKNQIGDVGAQAIAEALKVNTTLKELYLERNFISENGIKALNQVGN 164

Query: 413 QNRTITTIDLGG------NNIHSKGASAIARVLKDNSVITSLDLAYNP------------ 454
           ++  + T D           + S+ A A   VL D +        Y+             
Sbjct: 165 RSCKLWTDDQRKPSPAQLQEMASRAAQARPSVLLDQNTNQRQRQLYDEVKNESGQLYLDQ 224

Query: 455 --IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
             IG + AKA++E LK +  + TL L   QIG  GA  + + L+ N T++ L L AN + 
Sbjct: 225 ERIGDEEAKAIAEALKVNTTLTTLNLQQNQIGDVGARAITEALKVNTTLTTLYLSANQIG 284

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           D GA+ +A++ KV N  LT + L  N I D GA AIA+ALKAN+
Sbjct: 285 DVGAQAIAEALKV-NTTLTWLFLDNNLIGDVGAQAIAEALKANK 327



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 117/237 (49%), Gaps = 49/237 (20%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L +  IGDE A+ IA+ALK N T+T + L  N+I   GA AIA  LK N+ +T++ L 
Sbjct: 32  LDLELGQIGDEEAKAIAEALKVNNTVTELFLQENDIGDVGAQAIAEALKVNTKLTTVYLY 91

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA A++E LK +  + TL LG  QIG  GA+ +A+ L+ N T+  L L  N +
Sbjct: 92  NNLIGDVGAHAIAEALKMNTTLTTLYLGKNQIGDVGAQAIAEALKVNTTLKELYLERNFI 151

Query: 512 RDEGAKCLAQ----SFKV-------------------VNEALTSIDLA----------FN 538
            + G K L Q    S K+                     +A  S+ L           ++
Sbjct: 152 SENGIKALNQVGNRSCKLWTDDQRKPSPAQLQEMASRAAQARPSVLLDQNTNQRQRQLYD 211

Query: 539 EIR--------------DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           E++              D+ A AIA+ALK N    +T+LNL  N +   G  A+T+A
Sbjct: 212 EVKNESGQLYLDQERIGDEEAKAIAEALKVN--TTLTTLNLQQNQIGDVGARAITEA 266



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 130/299 (43%), Gaps = 25/299 (8%)

Query: 144 GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
           G++  E  + + E  K     + + +   + GD G   +AE+L  N     V    N I 
Sbjct: 37  GQIGDEEAKAIAEALKVNNTVTELFLQENDIGDVGAQAIAEALKVNTKLTTVYLYNNLIG 96

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
             G  A    L+ N  L TL L  N IGD G + + + L  N  ++ L L    + + G 
Sbjct: 97  DVGAHAIAEALKMNTTLTTLYLGKNQIGDVGAQAIAEALKVNTTLKELYLERNFISENGI 156

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLA--------EALLENSTIR---------- 305
           KA+ ++   N   ++   +      +    +A          LL+ +T +          
Sbjct: 157 KALNQV--GNRSCKLWTDDQRKPSPAQLQEMASRAAQARPSVLLDQNTNQRQRQLYDEVK 214

Query: 306 ----SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
                L+L+    G   A A+A+ L+ N +L  L+L  N IGD G RA+   L      L
Sbjct: 215 NESGQLYLDQERIGDEEAKAIAEALKVNTTLTTLNLQQNQIGDVGARAITEALKV-NTTL 273

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
             L +  N I   GA  +AE +K   +L W+ L  N IGD GA+ IA+ALK N+T+  +
Sbjct: 274 TTLYLSANQIGDVGAQAIAEALKVNTTLTWLFLDNNLIGDVGAQAIAEALKANKTLKAL 332


>gi|320163988|gb|EFW40887.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 451

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/276 (37%), Positives = 149/276 (53%), Gaps = 32/276 (11%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           LHLN    G   A A+A+ L+ N++L +L+L+ N IGD G +A                 
Sbjct: 25  LHLNCKQIGVAEAQAIAEALKVNRTLTDLNLNVNLIGDAGAQA----------------- 67

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
                       +AE +K   +L  + L    IGD GA  IA+ALK N T+T + LG N 
Sbjct: 68  ------------IAEALKVNTTLTVLFLGGTQIGDIGALAIAEALKVNTTLTALSLGNNQ 115

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I   GA A A  LK N+++T L L +N IG  GA+A +E LK +  +  L+L + QIG  
Sbjct: 116 IGDAGAQAFAEALKANTMLTELTLDWNQIGDAGAQAFAEALKANTTLTQLQLDFNQIGEV 175

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
           G + +A+ L+ N T+++L L+ N   D GA+ +A++ K VN  LT + L  N+I D GA 
Sbjct: 176 GMQAIAEALQVNKTLTLLYLKENRFGDVGAQAIAEALK-VNTTLTELRLNDNQIGDGGAC 234

Query: 547 AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 582
           AIA+ALK N+   VT L+L  N +   G  A  +A+
Sbjct: 235 AIAEALKVNK--TVTRLSLDRNCIGSVGSQAFDEAR 268



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 93/246 (37%), Positives = 128/246 (52%), Gaps = 1/246 (0%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L LN   I  +   ++AEAL  N T+  L+LN N  G  GA A+A+ L+ N +L  L L 
Sbjct: 25  LHLNCKQIGVAEAQAIAEALKVNRTLTDLNLNVNLIGDAGAQAIAEALKVNTTLTVLFLG 84

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           G  IGD G  A+   L      L  L +GNN I   GA   AE +K    L  + L  N 
Sbjct: 85  GTQIGDIGALAIAEALKVNT-TLTALSLGNNQIGDAGAQAFAEALKANTMLTELTLDWNQ 143

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD GA+  A+ALK N T+T + L  N I   G  AIA  L+ N  +T L L  N  G  
Sbjct: 144 IGDAGAQAFAEALKANTTLTQLQLDFNQIGEVGMQAIAEALQVNKTLTLLYLKENRFGDV 203

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA+A++E LK +  +  L+L   QIG  GA  +A+ L+ N T++ L L  N +   G++ 
Sbjct: 204 GAQAIAEALKVNTTLTELRLNDNQIGDGGACAIAEALKVNKTVTRLSLDRNCIGSVGSQA 263

Query: 519 LAQSFK 524
             ++ K
Sbjct: 264 FDEARK 269



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 133/275 (48%), Gaps = 29/275 (10%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E+      I  A  +A    L+ N  L  LNL+ N IGD G + + + L  N  +  L L
Sbjct: 24  ELHLNCKQIGVAEAQAIAEALKVNRTLTDLNLNVNLIGDAGAQAIAEALKVNTTLTVLFL 83

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               + D GA AIAE LK N+ L  L L NN I  +G  + AEAL  N+ +  L L+ N 
Sbjct: 84  GGTQIGDIGALAIAEALKVNTTLTALSLGNNQIGDAGAQAFAEALKANTMLTELTLDWNQ 143

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G  GA A A+ L+ N +L +L L  N IG+ G++A                        
Sbjct: 144 IGDAGAQAFAEALKANTTLTQLQLDFNQIGEVGMQA------------------------ 179

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
                +AE ++  K+L  + L  N  GD GA+ IA+ALK N T+T + L  N I   GA 
Sbjct: 180 -----IAEALQVNKTLTLLYLKENRFGDVGAQAIAEALKVNTTLTELRLNDNQIGDGGAC 234

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           AIA  LK N  +T L L  N IG+ G++A  E  K
Sbjct: 235 AIAEALKVNKTVTRLSLDRNCIGSVGSQAFDEARK 269



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 115/237 (48%), Gaps = 2/237 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  R  + ++++    GD G   +AE+L  N T   +      I   G  A  
Sbjct: 38  QAIAEALKVNRTLTDLNLNVNLIGDAGAQAIAEALKVNTTLTVLFLGGTQIGDIGALAIA 97

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L+L  N IGD G +   + L  N  +  L L    + D GA+A AE LK
Sbjct: 98  EALKVNTTLTALSLGNNQIGDAGAQAFAEALKANTMLTELTLDWNQIGDAGAQAFAEALK 157

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  L+L+ N I   G  ++AEAL  N T+  L+L  N  G +GA A+A+ L+ N +
Sbjct: 158 ANTTLTQLQLDFNQIGEVGMQAIAEALQVNKTLTLLYLKENRFGDVGAQAIAEALKVNTT 217

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCK 387
           L EL L+ N IGD G  A+   L   K  +  L +  N I + G+    E  K NC+
Sbjct: 218 LTELRLNDNQIGDGGACAIAEALKVNK-TVTRLSLDRNCIGSVGSQAFDEARKGNCR 273


>gi|320165192|gb|EFW42091.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 455

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/264 (37%), Positives = 151/264 (57%), Gaps = 8/264 (3%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L+L  N IGD   + +   L       + LD+  N I   GA  +AE +K  K+L W+NL
Sbjct: 19  LYLSENQIGDAEAQIIAEALKVNTTATS-LDLSENQIGDAGAQAIAEALKVNKTLFWLNL 77

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N IGD GA  IA+AL+ N+T+  + L  N I   GA AIA  LK N  +T L+L  N 
Sbjct: 78  HQNQIGDAGAHAIAEALRVNKTLKELSLAQNQIGDAGAQAIAEALKVNKTLTLLNLIVNQ 137

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA+A+ + LK +  + +L L    IG +GA+ +AD L+ N T+S L+L  N + D 
Sbjct: 138 IGDAGARAIVDTLKVNETVTSLHLHDNLIGDAGAQAIADALKVNKTLSWLNLIDNQIGDA 197

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           GA+ +A++ K VN+ + ++ L+ N+I D GA AIA+AL  N+   +  L+L  N +   G
Sbjct: 198 GAQAIAEALK-VNKMVKTLSLSENQIGDIGAQAIAEALMVNKQ--LWWLDLKCNCIGDAG 254

Query: 575 QSALTDAKD----LVYEMSEKEVN 594
             A+ +A+     L + + +K++N
Sbjct: 255 FQAIGEARQVNRTLAHLLIDKQIN 278



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 135/243 (55%), Gaps = 1/243 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L LS N IGD   + + + L  N     L LS   + D GA+AIAE LK N  L  L L+
Sbjct: 19  LYLSENQIGDAEAQIIAEALKVNTTATSLDLSENQIGDAGAQAIAEALKVNKTLFWLNLH 78

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  ++AEAL  N T++ L L  N  G  GA A+A+ L+ NK+L  L+L  N I
Sbjct: 79  QNQIGDAGAHAIAEALRVNKTLKELSLAQNQIGDAGAQAIAEALKVNKTLTLLNLIVNQI 138

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G RA++  L   +  +  L + +N I   GA  +A+ +K  K+L W+NL  N IGD 
Sbjct: 139 GDAGARAIVDTLKVNE-TVTSLHLHDNLIGDAGAQAIADALKVNKTLSWLNLIDNQIGDA 197

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N+ + T+ L  N I   GA AIA  L  N  +  LDL  N IG  G +A
Sbjct: 198 GAQAIAEALKVNKMVKTLSLSENQIGDIGAQAIAEALMVNKQLWWLDLKCNCIGDAGFQA 257

Query: 463 LSE 465
           + E
Sbjct: 258 IGE 260



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 130/249 (52%), Gaps = 1/249 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GD     +AE+L  N TA  +  + N I  AG +A    L+ N  L  LNL  N
Sbjct: 21  LSENQIGDAEAQIIAEALKVNTTATSLDLSENQIGDAGAQAIAEALKVNKTLFWLNLHQN 80

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G   + + L  N  ++ L L+   + D GA+AIAE LK N  L +L L  N I  
Sbjct: 81  QIGDAGAHAIAEALRVNKTLKELSLAQNQIGDAGAQAIAEALKVNKTLTLLNLIVNQIGD 140

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++ + L  N T+ SLHL+ N  G  GA A+A  L+ NK+L  L+L  N IGD G +
Sbjct: 141 AGARAIVDTLKVNETVTSLHLHDNLIGDAGAQAIADALKVNKTLSWLNLIDNQIGDAGAQ 200

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+   L   K  +  L +  N I   GA  +AE +   K L W++L  N IGD G + I 
Sbjct: 201 AIAEALKVNK-MVKTLSLSENQIGDIGAQAIAEALMVNKQLWWLDLKCNCIGDAGFQAIG 259

Query: 409 DALKQNRTI 417
           +A + NRT+
Sbjct: 260 EARQVNRTL 268



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 106/199 (53%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  +    +++     GD G   +AE+L  N+T +E+S A N I  AG +A  
Sbjct: 60  QAIAEALKVNKTLFWLNLHQNQIGDAGAHAIAEALRVNKTLKELSLAQNQIGDAGAQAIA 119

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNL  N IGD G + + D L  N  V  L L    + D GA+AIA+ LK
Sbjct: 120 EALKVNKTLTLLNLIVNQIGDAGARAIVDTLKVNETVTSLHLHDNLIGDAGAQAIADALK 179

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L L +N I  +G  ++AEAL  N  +++L L+ N  G +GA A+A+ L  NK 
Sbjct: 180 VNKTLSWLNLIDNQIGDAGAQAIAEALKVNKMVKTLSLSENQIGDIGAQAIAEALMVNKQ 239

Query: 332 LRELHLHGNSIGDEGIRAL 350
           L  L L  N IGD G +A+
Sbjct: 240 LWWLDLKCNCIGDAGFQAI 258



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 88/174 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +    + ++    GD G   +AE+L  N+T   ++   N I  AG +A    L+ N  + 
Sbjct: 98  KTLKELSLAQNQIGDAGAQAIAEALKVNKTLTLLNLIVNQIGDAGARAIVDTLKVNETVT 157

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L+L  N IGD G + + D L  N  +  L L    + D GA+AIAE LK N +++ L L
Sbjct: 158 SLHLHDNLIGDAGAQAIADALKVNKTLSWLNLIDNQIGDAGAQAIAEALKVNKMVKTLSL 217

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + N I   G  ++AEAL+ N  +  L L  N  G  G  A+ +  + N++L  L
Sbjct: 218 SENQIGDIGAQAIAEALMVNKQLWWLDLKCNCIGDAGFQAIGEARQVNRTLAHL 271



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 76/156 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  +  + +++     GD G   + ++L  N+T   +    N I  AG +A  
Sbjct: 116 QAIAEALKVNKTLTLLNLIVNQIGDAGARAIVDTLKVNETVTSLHLHDNLIGDAGAQAIA 175

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNL  N IGD G + + + L  N  V+ L LS   + D GA+AIAE L 
Sbjct: 176 DALKVNKTLSWLNLIDNQIGDAGAQAIAEALKVNKMVKTLSLSENQIGDIGAQAIAEALM 235

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            N  L  L+L  N I  +GF ++ EA   N T+  L
Sbjct: 236 VNKQLWWLDLKCNCIGDAGFQAIGEARQVNRTLAHL 271



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 7/146 (4%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +S+ +     GD G   +A++L  N+T   ++   N I  AG +A    L+ N  +KTL
Sbjct: 156 VTSLHLHDNLIGDAGAQAIADALKVNKTLSWLNLIDNQIGDAGAQAIAEALKVNKMVKTL 215

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N IGD G + + + L+ N  +  L L    + D G +AI E  + N  L  L    
Sbjct: 216 SLSENQIGDIGAQAIAEALMVNKQLWWLDLKCNCIGDAGFQAIGEARQVNRTLAHL---- 271

Query: 284 NMIDYSGFTSLAEALLEN-STIRSLH 308
            +ID      LA +LL   ST   LH
Sbjct: 272 -LIDKQ-INPLAFSLLPRMSTAEDLH 295


>gi|281201481|gb|EFA75690.1| hypothetical protein PPL_10743 [Polysphondylium pallidum PN500]
          Length = 614

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 133/394 (33%), Positives = 205/394 (52%), Gaps = 19/394 (4%)

Query: 185 SLGYNQTAEE-VSFAANGITAAGIKA--------FDGVLQSNIALKTL---NLSGNPIGD 232
           S+  NQ  E  V ++  GI + G K            VL   +AL TL   +L  NP  +
Sbjct: 58  SISTNQPPEPLVKYSERGIVSGGEKVVYRRIVMRIGKVLDYIVALDTLTTIDLRNNPNTN 117

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             V  L D L  N  +  L L +  L  +G  +IA  L  N+ L  L+L  NM+  +G  
Sbjct: 118 SIVDRLADNLKTNKSITSLNLYNNRLMQKGGTSIANALARNTHLLHLDLGLNMLGANGGN 177

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           S+AEA+ +N+T+  L L  N     GA  + + L+ NKSL+ L LH N + DE    L  
Sbjct: 178 SIAEAMKKNNTLTHLDLASNQLSFRGAGPIVEALKVNKSLKYLVLHSNQLRDECGLPLAD 237

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L   +G   VL + +N I AK    +A  +K  KSL+ I+   N++GD+G   +AD +K
Sbjct: 238 VLRQNQG-FVVLGLNDNEIGAKSGVALARMLKTVKSLVQIDFGKNELGDDGGLAMADTIK 296

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N++I +I+L  N + +K A AIA  +K N+ IT+LDL++N IGA+G  +L+  L  + +
Sbjct: 297 TNKSIKSINLSWNKLGAKAAKAIADAIKLNTSITTLDLSFNNIGAEGLSSLAASLATNQS 356

Query: 473 INTLKLGWCQIGAS---GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           I+T+ L   ++ AS   G   +A+ L+ N  IS LDL  + L DE    +AQS  + N+ 
Sbjct: 357 IHTVDLS--RVSASTPDGHIALANALKTNRIISHLDLNNSKLSDEAGIAIAQSL-IENKT 413

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           ++++ L+ N         ++ AL  N  +A   L
Sbjct: 414 ISTLVLSNNPFGASAIKELSSALTKNRSLATLYL 447



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 161/318 (50%), Gaps = 36/318 (11%)

Query: 253 LSSVDLRDEG-----AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           L+++DLR+          +A+ LK N  +  L L NN +   G TS+A AL  N+ +  L
Sbjct: 105 LTTIDLRNNPNTNSIVDRLADNLKTNKSITSLNLYNNRLMQKGGTSIANALARNTHLLHL 164

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L  N  GA G N++A+ ++ N +L  L                             D+ 
Sbjct: 165 DLGLNMLGANGGNSIAEAMKKNNTLTHL-----------------------------DLA 195

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           +N +S +GA  + E +K  KSL ++ L+ N + DE    +AD L+QN+    + L  N I
Sbjct: 196 SNQLSFRGAGPIVEALKVNKSLKYLVLHSNQLRDECGLPLADVLRQNQGFVVLGLNDNEI 255

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +K   A+AR+LK    +  +D   N +G DG  A+++ +K + +I ++ L W ++GA  
Sbjct: 256 GAKSGVALARMLKTVKSLVQIDFGKNELGDDGGLAMADTIKTNKSIKSINLSWNKLGAKA 315

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA-FNEIRDDGAF 546
           A+ +AD ++ N +I+ LDL  N +  EG   LA S    N+++ ++DL+  +    DG  
Sbjct: 316 AKAIADAIKLNTSITTLDLSFNNIGAEGLSSLAASL-ATNQSIHTVDLSRVSASTPDGHI 374

Query: 547 AIAQALKANEDVAVTSLN 564
           A+A ALK N  ++   LN
Sbjct: 375 ALANALKTNRIISHLDLN 392



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 208/478 (43%), Gaps = 56/478 (11%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           ++   L   +++D+      +  +  LA++L  N++   ++   N +   G  +    L 
Sbjct: 97  DYIVALDTLTTIDLRNNPNTNSIVDRLADNLKTNKSITSLNLYNNRLMQKGGTSIANALA 156

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N  L  L+L  N +G  G   + + +  N  +  L L+S  L   GA  I E LK N  
Sbjct: 157 RNTHLLHLDLGLNMLGANGGNSIAEAMKKNNTLTHLDLASNQLSFRGAGPIVEALKVNKS 216

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+ L L++N +       LA+ L +N     L LN N  GA    ALA+ L+  KSL ++
Sbjct: 217 LKYLVLHSNQLRDECGLPLADVLRQNQGFVVLGLNDNEIGAKSGVALARMLKTVKSLVQI 276

Query: 336 HLHGNSIGDEGIRALMSGLSSRKG---------------------------KLAVLDIGN 368
               N +GD+G  A+   + + K                             +  LD+  
Sbjct: 277 DFGKNELGDDGGLAMADTIKTNKSIKSINLSWNKLGAKAAKAIADAIKLNTSITTLDLSF 336

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINL-YMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           N+I A+G   +A  +   +S+  ++L  ++    +G   +A+ALK NR I+ +DL  + +
Sbjct: 337 NNIGAEGLSSLAASLATNQSIHTVDLSRVSASTPDGHIALANALKTNRIISHLDLNNSKL 396

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             +   AIA+ L +N  I++L L+ NP GA   K LS  L  + ++ TL L    +   G
Sbjct: 397 SDEAGIAIAQSLIENKTISTLVLSNNPFGASAIKELSSALTKNRSLATLYLA-ASVKIEG 455

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK----------------------- 524
            E + + L  N+T++ LDL  N    EG   +A+  K                       
Sbjct: 456 VEPLFEALSQNSTLTTLDLANNQFGAEGGAMIAKHLKQCKHLLELSIQNNQLGVSANQIL 515

Query: 525 -VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             + ++L  IDL+ N I      ++A AL+ ++   ++ LN++ N L       L  A
Sbjct: 516 DSIPQSLQCIDLSNNLIMPSSGTSLANALQKDQ---LSKLNISQNKLDDDNSQPLVQA 570



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 213/442 (48%), Gaps = 40/442 (9%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++M G N G+     +AE++  N T   +  A+N ++  G       L+ N +LK L L 
Sbjct: 168 LNMLGANGGNS----IAEAMKKNNTLTHLDLASNQLSFRGAGPIVEALKVNKSLKYLVLH 223

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N + DE    L D+L  N G   L L+  ++  +   A+A +LK    L  ++   N +
Sbjct: 224 SNQLRDECGLPLADVLRQNQGFVVLGLNDNEIGAKSGVALARMLKTVKSLVQIDFGKNEL 283

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  ++A+ +  N +I+S++L+ N  GA  A A+A  ++ N S+  L L  N+IG EG
Sbjct: 284 GDDGGLAMADTIKTNKSIKSINLSWNKLGAKAAKAIADAIKLNTSITTLDLSFNNIGAEG 343

Query: 347 IRALMSGLSSRK----------------GKLAV------------LDIGNNSISAKGAFH 378
           + +L + L++ +                G +A+            LD+ N+ +S +    
Sbjct: 344 LSSLAASLATNQSIHTVDLSRVSASTPDGHIALANALKTNRIISHLDLNNSKLSDEAGIA 403

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A+ +   K++  + L  N  G    ++++ AL +NR++ T+ L   ++  +G   +   
Sbjct: 404 IAQSLIENKTISTLVLSNNPFGASAIKELSSALTKNRSLATLYLAA-SVKIEGVEPLFEA 462

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  NS +T+LDLA N  GA+G   +++ LK   ++  L +   Q+G S  + +  + +  
Sbjct: 463 LSQNSTLTTLDLANNQFGAEGGAMIAKHLKQCKHLLELSIQNNQLGVSANQILDSIPQ-- 520

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++  +DL  N +       LA + +   + L+ ++++ N++ DD +  + QAL  ++  
Sbjct: 521 -SLQCIDLSNNLIMPSSGTSLANALQ--KDQLSKLNISQNKLDDDNSQPLVQAL--SKTT 575

Query: 559 AVTSLNLANNFLTKFGQSALTD 580
           A+  + +  N  TK   + L D
Sbjct: 576 ALVHIQIIANQFTKQANNQLLD 597



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 112/220 (50%), Gaps = 31/220 (14%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           V +YI    +L  I+L  N   +   +++AD LK N++IT+++L  N +  KG ++IA  
Sbjct: 95  VLDYIVALDTLTTIDLRNNPNTNSIVDRLADNLKTNKSITSLNLYNNRLMQKGGTSIANA 154

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  N+ +  LDL  N +GA+G  +++E +K +  +  L L   Q+   GA  + + L+ N
Sbjct: 155 LARNTHLLHLDLGLNMLGANGGNSIAEAMKKNNTLTHLDLASNQLSFRGAGPIVEALKVN 214

Query: 499 NTISILDLRANGLRDE-------------------------GAK---CLAQSFKVVNEAL 530
            ++  L L +N LRDE                         GAK    LA+  K V ++L
Sbjct: 215 KSLKYLVLHSNQLRDECGLPLADVLRQNQGFVVLGLNDNEIGAKSGVALARMLKTV-KSL 273

Query: 531 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
             ID   NE+ DDG  A+A  +K N+  ++ S+NL+ N L
Sbjct: 274 VQIDFGKNELGDDGGLAMADTIKTNK--SIKSINLSWNKL 311



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 132/293 (45%), Gaps = 13/293 (4%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA-ANGITAAGIKAFDGVLQSNIALK 221
           + +++D+S  N G EGL  LA SL  NQ+   V  +  +  T  G  A    L++N  + 
Sbjct: 328 SITTLDLSFNNIGAEGLSSLAASLATNQSIHTVDLSRVSASTPDGHIALANALKTNRIIS 387

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL---LKNNSILRV 278
            L+L+ + + DE    +   L++N  +  L LS+      GA AI EL   L  N  L  
Sbjct: 388 HLDLNNSKLSDEAGIAIAQSLIENKTISTLVLSNNPF---GASAIKELSSALTKNRSLAT 444

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L  + +   G   L EAL +NST+ +L L  N  GA G   +AK L+  K L EL + 
Sbjct: 445 LYLAAS-VKIEGVEPLFEALSQNSTLTTLDLANNQFGAEGGAMIAKHLKQCKHLLELSIQ 503

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G    +     L S    L  +D+ NN I       +A  ++    L  +N+  N 
Sbjct: 504 NNQLGVSANQI----LDSIPQSLQCIDLSNNLIMPSSGTSLANALQK-DQLSKLNISQNK 558

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + D+ ++ +  AL +   +  I +  N    +  + +   ++ N  I   DL 
Sbjct: 559 LDDDNSQPLVQALSKTTALVHIQIIANQFTKQANNQLLDCIRKNKSIYFYDLV 611


>gi|402907479|ref|XP_003916502.1| PREDICTED: protein NLRC3-like, partial [Papio anubis]
          Length = 333

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/325 (35%), Positives = 167/325 (51%), Gaps = 28/325 (8%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N +   G  S+AEAL  N T+  LHL  N  G +GA  +A  L+ N+SL+EL L  N
Sbjct: 1   LQGNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELVLSSN 60

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           SIGD G +AL   L   +G L  LD+ +NSIS  G   +   +   ++LL ++L  N I 
Sbjct: 61  SIGDGGSKALAEALKVNQG-LESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSIS 119

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            EG + IA AL  N T+  +DL  N +H +GA AIA  +++N  +TSL L +N I A  A
Sbjct: 120 PEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVRENHTLTSLHLQWNFIQAGAA 179

Query: 461 KALSEVLKFHGNINTLK------------------------LGWCQIGASGAEFVADMLR 496
           +AL + L+ + ++ +L                         L    IGA GA+ + + L 
Sbjct: 180 QALGQALQLNRSLTSLXXXXXXXXXXXXXXXXXXTALTALYLQVASIGAPGAQVLGEALA 239

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            N T+ ILDLR N +   GAK LA + K VN +L  ++L  N +   GA  +A AL  N 
Sbjct: 240 VNRTLEILDLRGNAIGVSGAKALANALK-VNSSLRRLNLQENSLGMGGAICVATALSGNH 298

Query: 557 DVAVTSLNLANNFLTKFGQSALTDA 581
              +  +NL  N +   G   +++A
Sbjct: 299 R--LQHINLQGNHIGDSGARMISEA 321



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 151/330 (45%), Gaps = 5/330 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G    D+G   +AE+L  N+T   +    N I   G +     L+ N +LK L LS N
Sbjct: 1   LQGNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELVLSSN 60

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L  N I  
Sbjct: 61  SIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISP 120

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++A AL  NST+++L L  N     GA A+A  +  N +L  LHL  N I     +
Sbjct: 121 EGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVRENHTLTSLHLQWNFIQAGAAQ 180

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   L   +   ++                        +L  + L +  IG  GA+ + 
Sbjct: 181 ALGQALQLNRSLTSL-----XXXXXXXXXXXXXXXXXXTALTALYLQVASIGAPGAQVLG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +AL  NRT+  +DL GN I   GA A+A  LK NS +  L+L  N +G  GA  ++  L 
Sbjct: 236 EALAVNRTLEILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALS 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            +  +  + L    IG SGA  +++ ++ N
Sbjct: 296 GNHRLQHINLQGNHIGDSGARMISEAIKTN 325



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 153/320 (47%), Gaps = 53/320 (16%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           +RD+GA+++AE L +N  L VL L  N I   G   +A+AL +N +++ L L+ N  G  
Sbjct: 6   VRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELVLSSNSIGDG 65

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G+ ALA+ L+ N+ L  L L  NSI D G+ ALM  L + +  L+ L +  NSIS +G  
Sbjct: 66  GSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGGQ 124

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN------------ 425
            +A  +    +L  ++L  N + D+GA+ IA A+++N T+T++ L  N            
Sbjct: 125 AIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVRENHTLTSLHLQWNFIQAGAAQALGQ 184

Query: 426 ----------------------------------------NIHSKGASAIARVLKDNSVI 445
                                                   +I + GA  +   L  N  +
Sbjct: 185 ALQLNRSLTSLXXXXXXXXXXXXXXXXXXTALTALYLQVASIGAPGAQVLGEALAVNRTL 244

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
             LDL  N IG  GAKAL+  LK + ++  L L    +G  GA  VA  L  N+ +  ++
Sbjct: 245 EILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQHIN 304

Query: 506 LRANGLRDEGAKCLAQSFKV 525
           L+ N + D GA+ ++++ K 
Sbjct: 305 LQGNHIGDSGARMISEAIKT 324



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 151/313 (48%), Gaps = 25/313 (7%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  S + +   + G  G   +A++L  N++ +E+  ++N I   G KA    L+ N  L+
Sbjct: 22  RTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELVLSSNSIGDGGSKALAEALKVNQGLE 81

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L+L  N I D GV  L   L  N  +  L L    +  EG +AIA  L  NS L+ L+L
Sbjct: 82  SLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDL 141

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE------- 334
             N++   G  ++A A+ EN T+ SLHL  N+  A  A AL + L+ N+SL         
Sbjct: 142 TANLLHDQGAQAIAVAVRENHTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLXXXXXX 201

Query: 335 -----------------LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
                            L+L   SIG  G + L   L+  +  L +LD+  N+I   GA 
Sbjct: 202 XXXXXXXXXXXXTALTALYLQVASIGAPGAQVLGEALAVNR-TLEILDLRGNAIGVSGAK 260

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +K   SL  +NL  N +G  GA  +A AL  N  +  I+L GN+I   GA  I+ 
Sbjct: 261 ALANALKVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQHINLQGNHIGDSGARMISE 320

Query: 438 VLKDNSVITSLDL 450
            +K N+   ++++
Sbjct: 321 AIKTNAPTCTVEM 333


>gi|320165491|gb|EFW42390.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 836

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 183/358 (51%), Gaps = 33/358 (9%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L+TLNL+ N IGD+G K +   L +   +  L L    + D GA+AIAE +K  
Sbjct: 41  LKANSNLQTLNLNDNQIGDKGAKAIGSALRNKRILSGLYLGGNSIGDAGARAIAEAVKTA 100

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             +  L L  N ID +G  ++  AL     + +L L  N  G  GA A+A+GL  + +L 
Sbjct: 101 PEMTHLWLYKNQIDDAGAQAIGLALRNKPKLSTLFLFENSIGDTGARAIAEGLLASTALT 160

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           +L ++ N IGD G +A+ S L + K  L+ L +  N I   GA  +AE + +  +L  + 
Sbjct: 161 DLRMYDNQIGDAGAQAIGSALRN-KTNLSSLHLNTNKIGDIGARAIAEGLTST-ALTQLG 218

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           ++ N+IG+ GA  I  AL+    ++   L  NNI   GASAIA  L+ +S +T L     
Sbjct: 219 MHTNEIGEAGARAIGTALRNKANLSKFYLSKNNIGDAGASAIAEGLQTSSALTDL----- 273

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                                  ++   QIG +GA+ +   LR    +S L +  N + D
Sbjct: 274 -----------------------RMNATQIGDTGAQAIGFALRNKPNLSALGVDTNKITD 310

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            GA+ +A+  K  + ALT + +  N+I D GA AI  AL++   V ++ LN+++N ++
Sbjct: 311 AGARAIAEGLK-TSTALTQLAMNANQIGDVGAQAIGSALQSK--VFLSKLNVSDNQIS 365



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 176/375 (46%), Gaps = 3/375 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
            FR + +    FA + ++  SV++      D     +AE L  N   + ++   N I   
Sbjct: 2   FFRRTSRQRALFA-QAKSSRSVELQNSEITDADALVIAEGLKANSNLQTLNLNDNQIGDK 60

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G KA    L++   L  L L GN IGD G + + + +     +  L L    + D GA+A
Sbjct: 61  GAKAIGSALRNKRILSGLYLGGNSIGDAGARAIAEAVKTAPEMTHLWLYKNQIDDAGAQA 120

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           I   L+N   L  L L  N I  +G  ++AE LL ++ +  L +  N  G  GA A+   
Sbjct: 121 IGLALRNKPKLSTLFLFENSIGDTGARAIAEGLLASTALTDLRMYDNQIGDAGAQAIGSA 180

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L    +L  LHL+ N IGD G RA+  GL+S    L  L +  N I   GA  +   ++N
Sbjct: 181 LRNKTNLSSLHLNTNKIGDIGARAIAEGLTST--ALTQLGMHTNEIGEAGARAIGTALRN 238

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             +L    L  N+IGD GA  IA+ L+ +  +T + +    I   GA AI   L++   +
Sbjct: 239 KANLSKFYLSKNNIGDAGASAIAEGLQTSSALTDLRMNATQIGDTGAQAIGFALRNKPNL 298

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           ++L +  N I   GA+A++E LK    +  L +   QIG  GA+ +   L+    +S L+
Sbjct: 299 SALGVDTNKITDAGARAIAEGLKTSTALTQLAMNANQIGDVGAQAIGSALQSKVFLSKLN 358

Query: 506 LRANGLRDEGAKCLA 520
           +  N +     + L+
Sbjct: 359 VSDNQISSSAVQFLS 373



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 178/333 (53%), Gaps = 9/333 (2%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++L + ++ D  A  IAE LK NS L+ L LN+N I   G  ++  AL     +  L+L 
Sbjct: 22  VELQNSEITDADALVIAEGLKANSNLQTLNLNDNQIGDKGAKAIGSALRNKRILSGLYLG 81

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR-KGKLAVLDIGNN 369
           GN  G  GA A+A+ ++    +  L L+ N I D G +A+  GL+ R K KL+ L +  N
Sbjct: 82  GNSIGDAGARAIAEAVKTAPEMTHLWLYKNQIDDAGAQAI--GLALRNKPKLSTLFLFEN 139

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
           SI   GA  +AE +    +L  + +Y N IGD GA+ I  AL+    ++++ L  N I  
Sbjct: 140 SIGDTGARAIAEGLLASTALTDLRMYDNQIGDAGAQAIGSALRNKTNLSSLHLNTNKIGD 199

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA AIA  L  ++ +T L +  N IG  GA+A+   L+   N++   L    IG +GA 
Sbjct: 200 IGARAIAEGLT-STALTQLGMHTNEIGEAGARAIGTALRNKANLSKFYLSKNNIGDAGAS 258

Query: 490 FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA-LTSIDLAFNEIRDDGAFAI 548
            +A+ L+ ++ ++ L + A  + D GA+ +   F + N+  L+++ +  N+I D GA AI
Sbjct: 259 AIAEGLQTSSALTDLRMNATQIGDTGAQAIG--FALRNKPNLSALGVDTNKITDAGARAI 316

Query: 549 AQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           A+ LK +   A+T L +  N +   G  A+  A
Sbjct: 317 AEGLKTS--TALTQLAMNANQIGDVGAQAIGSA 347



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 128/253 (50%), Gaps = 9/253 (3%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           KS R + L  + I D     +  GL +    L  L++ +N I  KGA  +   ++N + L
Sbjct: 17  KSSRSVELQNSEITDADALVIAEGLKA-NSNLQTLNLNDNQIGDKGAKAIGSALRNKRIL 75

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L  N IGD GA  IA+A+K    +T + L  N I   GA AI   L++   +++L 
Sbjct: 76  SGLYLGGNSIGDAGARAIAEAVKTAPEMTHLWLYKNQIDDAGAQAIGLALRNKPKLSTLF 135

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L  N IG  GA+A++E L     +  L++   QIG +GA+ +   LR    +S L L  N
Sbjct: 136 LFENSIGDTGARAIAEGLLASTALTDLRMYDNQIGDAGAQAIGSALRNKTNLSSLHLNTN 195

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL--KANEDVAVTSLNLAN 567
            + D GA+ +A+     + ALT + +  NEI + GA AI  AL  KAN    ++   L+ 
Sbjct: 196 KIGDIGARAIAEGL--TSTALTQLGMHTNEIGEAGARAIGTALRNKAN----LSKFYLSK 249

Query: 568 NFLTKFGQSALTD 580
           N +   G SA+ +
Sbjct: 250 NNIGDAGASAIAE 262



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 3/194 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            SS+ ++    GD G   +AE  G   TA  ++    N I  AG +A    L++   L  
Sbjct: 187 LSSLHLNTNKIGDIGARAIAE--GLTSTALTQLGMHTNEIGEAGARAIGTALRNKANLSK 244

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
             LS N IGD G   + + L  ++ +  L++++  + D GA+AI   L+N   L  L ++
Sbjct: 245 FYLSKNNIGDAGASAIAEGLQTSSALTDLRMNATQIGDTGAQAIGFALRNKPNLSALGVD 304

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  ++AE L  ++ +  L +N N  G +GA A+   L+    L +L++  N I
Sbjct: 305 TNKITDAGARAIAEGLKTSTALTQLAMNANQIGDVGAQAIGSALQSKVFLSKLNVSDNQI 364

Query: 343 GDEGIRALMSGLSS 356
               ++ L S + S
Sbjct: 365 SSSAVQFLSSCVPS 378



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 3/169 (1%)

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           Q ++  +++L  + I    A  IA  LK NS + +L+L  N IG  GAKA+   L+    
Sbjct: 15  QAKSSRSVELQNSEITDADALVIAEGLKANSNLQTLNLNDNQIGDKGAKAIGSALRNKRI 74

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           ++ L LG   IG +GA  +A+ ++    ++ L L  N + D GA+ +  + +     L++
Sbjct: 75  LSGLYLGGNSIGDAGARAIAEAVKTAPEMTHLWLYKNQIDDAGAQAIGLALR-NKPKLST 133

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           + L  N I D GA AIA+ L A+   A+T L + +N +   G  A+  A
Sbjct: 134 LFLFENSIGDTGARAIAEGLLAS--TALTDLRMYDNQIGDAGAQAIGSA 180


>gi|320163781|gb|EFW40680.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 622

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/248 (39%), Positives = 136/248 (54%), Gaps = 9/248 (3%)

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           SLRE       IG+ G  A+   L   K  L VLD+GN  I       +AE +    +L 
Sbjct: 3   SLRE-----KQIGEAGAHAIAEALKVNK-TLTVLDLGNRQIGVAAVKALAEALNVSTTLT 56

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L   +I     + IA ALK N T+T ++LG N I   GA AIA  LK N  +T LDL
Sbjct: 57  TLDLGHTEIDHVDIQAIAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTKLDL 116

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
             N I  +GA+A++E LK +  +  L L   +IG  G + +AD L+ N T++ LDL  N 
Sbjct: 117 QQNQIEDEGAQAIAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLTKLDLFENP 176

Query: 511 LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           + D GA+ + ++ KV N  L S+ L  N+I DDGA  IA+ LK N+   +T L L +NFL
Sbjct: 177 IGDAGAQAIGEALKV-NTTLPSLHLYNNQIGDDGAKGIAEGLKVNK--TLTFLYLKDNFL 233

Query: 571 TKFGQSAL 578
           T  G+ AL
Sbjct: 234 TNAGRRAL 241



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/234 (38%), Positives = 134/234 (57%), Gaps = 2/234 (0%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA+A+A+ L+ NK+L  L L    IG   ++AL   L+     L  LD+G+  I   
Sbjct: 10  GEAGAHAIAEALKVNKTLTVLDLGNRQIGVAAVKALAEALNVST-TLTTLDLGHTEIDHV 68

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
               +A  +K   +L W+NL  N IGD GAE IA+ALK N+T+T +DL  N I  +GA A
Sbjct: 69  DIQAIAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTKLDLQQNQIEDEGAQA 128

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N+ +T L+L+ + IG  G +A+++ LK +  +  L L    IG +GA+ + + 
Sbjct: 129 IAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLTKLDLFENPIGDAGAQAIGEA 188

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           L+ N T+  L L  N + D+GAK +A+  K VN+ LT + L  N + + G  A+
Sbjct: 189 LKVNTTLPSLHLYNNQIGDDGAKGIAEGLK-VNKTLTFLYLKDNFLTNAGRRAL 241



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 131/245 (53%), Gaps = 1/245 (0%)

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           ++ L    I  +G  ++AEAL  N T+  L L     G     ALA+ L  + +L  L L
Sbjct: 1   MISLREKQIGEAGAHAIAEALKVNKTLTVLDLGNRQIGVAAVKALAEALNVSTTLTTLDL 60

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
               I    I+A+   L      L  L++G N I   GA  +AE +K  K++  ++L  N
Sbjct: 61  GHTEIDHVDIQAIAGALKVNT-TLTWLNLGENRIGDVGAEAIAEALKVNKTVTKLDLQQN 119

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            I DEGA+ IA+ALK N T+T ++L  + I   G  AIA  LK N  +T LDL  NPIG 
Sbjct: 120 QIEDEGAQAIAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLTKLDLFENPIGD 179

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
            GA+A+ E LK +  + +L L   QIG  GA+ +A+ L+ N T++ L L+ N L + G +
Sbjct: 180 AGAQAIGEALKVNTTLPSLHLYNNQIGDDGAKGIAEGLKVNKTLTFLYLKDNFLTNAGRR 239

Query: 518 CLAQS 522
            L +S
Sbjct: 240 ALRRS 244



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            I+L    IG+ GA  IA+ALK N+T+T +DLG   I      A+A  L  ++ +T+LDL
Sbjct: 1   MISLREKQIGEAGAHAIAEALKVNKTLTVLDLGNRQIGVAAVKALAEALNVSTTLTTLDL 60

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
            +  I     +A++  LK +  +  L LG  +IG  GAE +A+ L+ N T++ LDL+ N 
Sbjct: 61  GHTEIDHVDIQAIAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTKLDLQQNQ 120

Query: 511 LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           + DEGA+ +A++ K VN  LT ++L+ +EI   G  AIA ALK N+   +T L+L  N +
Sbjct: 121 IEDEGAQAIAEALK-VNTTLTELNLSQDEIGGVGGQAIADALKVNK--TLTKLDLFENPI 177

Query: 571 TKFGQSALTDA 581
              G  A+ +A
Sbjct: 178 GDAGAQAIGEA 188



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 29/271 (10%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +  +  G+ G   +AE+L  N+T   +      I  A +KA    L  +  L TL+L 
Sbjct: 2   ISLREKQIGEAGAHAIAEALKVNKTLTVLDLGNRQIGVAAVKALAEALNVSTTLTTLDLG 61

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
              I    ++ +   L  N  +  L L    + D GA+AIAE LK N  +  L+L  N I
Sbjct: 62  HTEIDHVDIQAIAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTKLDLQQNQI 121

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
           +  G  ++AEAL  N+T+  L+L+ +  G +G  A+A  L+ NK+L +L L  N IGD G
Sbjct: 122 EDEGAQAIAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLTKLDLFENPIGDAG 181

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            +A                             + E +K   +L  ++LY N IGD+GA+ 
Sbjct: 182 AQA-----------------------------IGEALKVNTTLPSLHLYNNQIGDDGAKG 212

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           IA+ LK N+T+T + L  N + + G  A+ R
Sbjct: 213 IAEGLKVNKTLTFLYLKDNFLTNAGRRALRR 243



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 109/214 (50%), Gaps = 1/214 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +D+  R  G   +  LAE+L  + T   +      I    I+A  G L+ N  L 
Sbjct: 25  KTLTVLDLGNRQIGVAAVKALAEALNVSTTLTTLDLGHTEIDHVDIQAIAGALKVNTTLT 84

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N IGD G + + + L  N  V +L L    + DEGA+AIAE LK N+ L  L L
Sbjct: 85  WLNLGENRIGDVGAEAIAEALKVNKTVTKLDLQQNQIEDEGAQAIAEALKVNTTLTELNL 144

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + + I   G  ++A+AL  N T+  L L  N  G  GA A+ + L+ N +L  LHL+ N 
Sbjct: 145 SQDEIGGVGGQAIADALKVNKTLTKLDLFENPIGDAGAQAIGEALKVNTTLPSLHLYNNQ 204

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           IGD+G + +  GL   K  L  L + +N ++  G
Sbjct: 205 IGDDGAKGIAEGLKVNK-TLTFLYLKDNFLTNAG 237



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 2/160 (1%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE+L  N+T  ++    N I   G +A    L+ N  L  LNLS + IG  
Sbjct: 93  IGDVGAEAIAEALKVNKTVTKLDLQQNQIEDEGAQAIAEALKVNTTLTELNLSQDEIGGV 152

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + D L  N  + +L L    + D GA+AI E LK N+ L  L L NN I   G   
Sbjct: 153 GGQAIADALKVNKTLTKLDLFENPIGDAGAQAIGEALKVNTTLPSLHLYNNQIGDDGAKG 212

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           +AE L  N T+  L+L  N+    G  AL +   GN + R
Sbjct: 213 IAEGLKVNKTLTFLYLKDNFLTNAGRRALRRS--GNTTCR 250



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 68/133 (51%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +D+      DEG   +AE+L  N T  E++ + + I   G +A    L+ N  L 
Sbjct: 109 KTVTKLDLQQNQIEDEGAQAIAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLT 168

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L  NPIGD G + + + L  N  +  L L +  + D+GAK IAE LK N  L  L L
Sbjct: 169 KLDLFENPIGDAGAQAIGEALKVNTTLPSLHLYNNQIGDDGAKGIAEGLKVNKTLTFLYL 228

Query: 282 NNNMIDYSGFTSL 294
            +N +  +G  +L
Sbjct: 229 KDNFLTNAGRRAL 241



 Score = 42.0 bits (97), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 56/118 (47%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  Q + E  K     + +++S    G  G   +A++L  N+T  ++    N I  AG +
Sbjct: 124 EGAQAIAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLTKLDLFENPIGDAGAQ 183

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           A    L+ N  L +L+L  N IGD+G K + + L  N  +  L L    L + G +A+
Sbjct: 184 AIGEALKVNTTLPSLHLYNNQIGDDGAKGIAEGLKVNKTLTFLYLKDNFLTNAGRRAL 241


>gi|320168401|gb|EFW45300.1| hypothetical protein CAOG_03306 [Capsaspora owczarzaki ATCC 30864]
          Length = 440

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 138/246 (56%), Gaps = 5/246 (2%)

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N IGD G  A+   L      L    + +N I   GA  +AE +K+ K L  + L 
Sbjct: 6   RLGSNRIGDGGAWAIAEALKVNT-TLTWFYLDSNQIGDAGAQAIAEALKD-KPLAELKLG 63

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IGD GA  IA+ALK N+T+T ++LG N I   GA AIA  LK N  +T L+   NPI
Sbjct: 64  GNRIGDAGARAIAEALKVNKTLTQLELGSNRIGDGGAWAIAEALKVNKTLTQLEFGDNPI 123

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G  GA+A++E L  +  +  L L   QIG +GA  +A+ L+ N T++ LDL  N + D G
Sbjct: 124 GDVGAQAVAEALTVNKTLTRLSLWSSQIGDAGARAIAEALKVNKTLTQLDLGDNQIGDVG 183

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
           A+ +A++ KV N+ LT + L+ N I D GA AIA+AL  N+   +T L L  N ++  G 
Sbjct: 184 AQAVAEALKV-NKTLTRLSLSCNRIGDAGAVAIAEALTVNK--TLTELYLTYNCISVLGS 240

Query: 576 SALTDA 581
            A+  A
Sbjct: 241 EAIYRA 246



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/244 (39%), Positives = 137/244 (56%), Gaps = 3/244 (1%)

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L  N  G  GA A+A+ L+ N +L   +L  N IGD G +A+   L  +   LA L +G
Sbjct: 6   RLGSNRIGDGGAWAIAEALKVNTTLTWFYLDSNQIGDAGAQAIAEALKDKP--LAELKLG 63

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N I   GA  +AE +K  K+L  + L  N IGD GA  IA+ALK N+T+T ++ G N I
Sbjct: 64  GNRIGDAGARAIAEALKVNKTLTQLELGSNRIGDGGAWAIAEALKVNKTLTQLEFGDNPI 123

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
              GA A+A  L  N  +T L L  + IG  GA+A++E LK +  +  L LG  QIG  G
Sbjct: 124 GDVGAQAVAEALTVNKTLTRLSLWSSQIGDAGARAIAEALKVNKTLTQLDLGDNQIGDVG 183

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
           A+ VA+ L+ N T++ L L  N + D GA  +A++   VN+ LT + L +N I   G+ A
Sbjct: 184 AQAVAEALKVNKTLTRLSLSCNRIGDAGAVAIAEAL-TVNKTLTELYLTYNCISVLGSEA 242

Query: 548 IAQA 551
           I +A
Sbjct: 243 IYRA 246



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/264 (37%), Positives = 141/264 (53%), Gaps = 10/264 (3%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           +T  L  N IGD G   + + L  N  +    L S  + D GA+AIAE LK+  +   L+
Sbjct: 3   ETDRLGSNRIGDGGAWAIAEALKVNTTLTWFYLDSNQIGDAGAQAIAEALKDKPLAE-LK 61

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N I  +G  ++AEAL  N T+  L L  N  G  GA A+A+ L+ NK+L +L    N
Sbjct: 62  LGGNRIGDAGARAIAEALKVNKTLTQLELGSNRIGDGGAWAIAEALKVNKTLTQLEFGDN 121

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD G +A+   L+  K  L  L + ++ I   GA  +AE +K  K+L  ++L  N IG
Sbjct: 122 PIGDVGAQAVAEALTVNK-TLTRLSLWSSQIGDAGARAIAEALKVNKTLTQLDLGDNQIG 180

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D GA+ +A+ALK N+T+T + L  N I   GA AIA  L  N  +T L L YN I   G+
Sbjct: 181 DVGAQAVAEALKVNKTLTRLSLSCNRIGDAGAVAIAEALTVNKTLTELYLTYNCISVLGS 240

Query: 461 KAL-------SEVLKFHGN-INTL 476
           +A+         +  FHG+ +N L
Sbjct: 241 EAIYRACTGKRRLQAFHGSRVNPL 264



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/275 (37%), Positives = 131/275 (47%), Gaps = 31/275 (11%)

Query: 164 FSSVDMSGRN-FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
               D  G N  GD G + +AE+L  N T       +N I  AG +A    L+    L  
Sbjct: 1   MEETDRLGSNRIGDGGAWAIAEALKVNTTLTWFYLDSNQIGDAGAQAIAEALKDK-PLAE 59

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L GN IGD                             GA+AIAE LK N  L  LEL 
Sbjct: 60  LKLGGNRIGD----------------------------AGARAIAEALKVNKTLTQLELG 91

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G  ++AEAL  N T+  L    N  G +GA A+A+ L  NK+L  L L  + I
Sbjct: 92  SNRIGDGGAWAIAEALKVNKTLTQLEFGDNPIGDVGAQAVAEALTVNKTLTRLSLWSSQI 151

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G RA+   L   K  L  LD+G+N I   GA  VAE +K  K+L  ++L  N IGD 
Sbjct: 152 GDAGARAIAEALKVNK-TLTQLDLGDNQIGDVGAQAVAEALKVNKTLTRLSLSCNRIGDA 210

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           GA  IA+AL  N+T+T + L  N I   G+ AI R
Sbjct: 211 GAVAIAEALTVNKTLTELYLTYNCISVLGSEAIYR 245



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 1/207 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K+ +  + + + G   GD G   +AE+L  N+T  ++   +N I   G  A  
Sbjct: 46  QAIAEALKD-KPLAELKLGGNRIGDAGARAIAEALKVNKTLTQLELGSNRIGDGGAWAIA 104

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L    NPIGD G + + + L  N  + RL L S  + D GA+AIAE LK
Sbjct: 105 EALKVNKTLTQLEFGDNPIGDVGAQAVAEALTVNKTLTRLSLWSSQIGDAGARAIAEALK 164

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L +N I   G  ++AEAL  N T+  L L+ N  G  GA A+A+ L  NK+
Sbjct: 165 VNKTLTQLDLGDNQIGDVGAQAVAEALKVNKTLTRLSLSCNRIGDAGAVAIAEALTVNKT 224

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRK 358
           L EL+L  N I   G  A+    + ++
Sbjct: 225 LTELYLTYNCISVLGSEAIYRACTGKR 251



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 89/175 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +++     GD G + +AE+L  N+T  ++ F  N I   G +A    L  N  L 
Sbjct: 83  KTLTQLELGSNRIGDGGAWAIAEALKVNKTLTQLEFGDNPIGDVGAQAVAEALTVNKTLT 142

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L  + IGD G + + + L  N  + +L L    + D GA+A+AE LK N  L  L L
Sbjct: 143 RLSLWSSQIGDAGARAIAEALKVNKTLTQLDLGDNQIGDVGAQAVAEALKVNKTLTRLSL 202

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           + N I  +G  ++AEAL  N T+  L+L  N    LG+ A+ +   G + L+  H
Sbjct: 203 SCNRIGDAGAVAIAEALTVNKTLTELYLTYNCISVLGSEAIYRACTGKRRLQAFH 257



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 4/107 (3%)

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
           T +LG  +IG  GA  +A+ L+ N T++   L +N + D GA+ +A++ K  ++ L  + 
Sbjct: 4   TDRLGSNRIGDGGAWAIAEALKVNTTLTWFYLDSNQIGDAGAQAIAEALK--DKPLAELK 61

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           L  N I D GA AIA+ALK N+   +T L L +N +   G  A+ +A
Sbjct: 62  LGGNRIGDAGARAIAEALKVNK--TLTQLELGSNRIGDGGAWAIAEA 106


>gi|156368357|ref|XP_001627661.1| predicted protein [Nematostella vectensis]
 gi|156214577|gb|EDO35561.1| predicted protein [Nematostella vectensis]
          Length = 294

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 111/311 (35%), Positives = 162/311 (52%), Gaps = 31/311 (9%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           ++  + N I++ G  A   +L  N  L+T  LS N IGDEG   + + L  N+ ++ L L
Sbjct: 14  DLDLSLNKISSKGAIAIAEMLSKNQLLETFRLSFNQIGDEGAIAIANALKTNSTLKILDL 73

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           +  ++ +EGAKAIAE L  NS L+  +L +  I   G  ++A AL+ NST++ L+L+ +Y
Sbjct: 74  TKNNIGNEGAKAIAEALMTNSTLKEFDLCDTNIGDEGAIAIANALMTNSTLKKLYLH-DY 132

Query: 314 G-GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
           G  A+G  ALA+         +LH                     K  L  LD+ +N IS
Sbjct: 133 GIRAVGIAALAR--------TQLH---------------------KPSLIGLDLSSNQIS 163

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
           +KGA  +AE +   + L    L +  IGDEGA  IA+AL  N T+  +DL GN I  +GA
Sbjct: 164 SKGAIAIAEMLSKNQLLETFRLCLYQIGDEGAIAIANALMTNSTLKKLDLEGNYIGDEGA 223

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            AIA  L  NS +  L L  + IG +GA A++  L  +  +  L L    I A GA  +A
Sbjct: 224 KAIAEALMTNSTLKELHLYESNIGDEGAIAIANALMTNSTLKKLHLHTYGIRAVGAAALA 283

Query: 493 DMLRYNNTISI 503
           DML YN  + +
Sbjct: 284 DMLYYNTELEV 294



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 159/301 (52%), Gaps = 7/301 (2%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA   L   ++  L L+ N   + GA A+A+ L  N+ L    L  N IGDEG  A+ +
Sbjct: 1   ALARTQLHEPSLIDLDLSLNKISSKGAIAIAEMLSKNQLLETFRLSFNQIGDEGAIAIAN 60

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L +    L +LD+  N+I  +GA  +AE +    +L   +L   +IGDEGA  IA+AL 
Sbjct: 61  ALKTN-STLKILDLTKNNIGNEGAKAIAEALMTNSTLKEFDLCDTNIGDEGAIAIANALM 119

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+  + L    I + G +A+AR       +  LDL+ N I + GA A++E+L  +  
Sbjct: 120 TNSTLKKLYLHDYGIRAVGIAALARTQLHKPSLIGLDLSSNQISSKGAIAIAEMLSKNQL 179

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           + T +L   QIG  GA  +A+ L  N+T+  LDL  N + DEGAK +A++  + N  L  
Sbjct: 180 LETFRLCLYQIGDEGAIAIANALMTNSTLKKLDLEGNYIGDEGAKAIAEAL-MTNSTLKE 238

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKE 592
           + L  + I D+GA AIA AL  N    +  L+L    +   G +AL    D++Y  +E E
Sbjct: 239 LHLYESNIGDEGAIAIANALMTNS--TLKKLHLHTYGIRAVGAAALA---DMLYYNTELE 293

Query: 593 V 593
           V
Sbjct: 294 V 294



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 145/277 (52%), Gaps = 1/277 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S      +G   +AE L  NQ  E    + N I   G  A    L++N  LK L+L+
Sbjct: 15  LDLSLNKISSKGAIAIAEMLSKNQLLETFRLSFNQIGDEGAIAIANALKTNSTLKILDLT 74

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IG+EG K + + L+ N+ ++   L   ++ DEGA AIA  L  NS L+ L L++  I
Sbjct: 75  KNNIGNEGAKAIAEALMTNSTLKEFDLCDTNIGDEGAIAIANALMTNSTLKKLYLHDYGI 134

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  +LA   L   ++  L L+ N   + GA A+A+ L  N+ L    L    IGDEG
Sbjct: 135 RAVGIAALARTQLHKPSLIGLDLSSNQISSKGAIAIAEMLSKNQLLETFRLCLYQIGDEG 194

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             A+ + L +    L  LD+  N I  +GA  +AE +    +L  ++LY ++IGDEGA  
Sbjct: 195 AIAIANALMTN-STLKKLDLEGNYIGDEGAKAIAEALMTNSTLKELHLYESNIGDEGAIA 253

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           IA+AL  N T+  + L    I + GA+A+A +L  N+
Sbjct: 254 IANALMTNSTLKKLHLHTYGIRAVGAAALADMLYYNT 290



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 143/284 (50%), Gaps = 6/284 (2%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+ N I   G  ++AE L +N  + +  L+ N  G  GA A+A  L+ N +L+ L L 
Sbjct: 15  LDLSLNKISSKGAIAIAEMLSKNQLLETFRLSFNQIGDEGAIAIANALKTNSTLKILDLT 74

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N+IG+EG +A+   L +    L   D+ + +I  +GA  +A  +    +L    LY++D
Sbjct: 75  KNNIGNEGAKAIAEALMTN-STLKEFDLCDTNIGDEGAIAIANALMTNSTL--KKLYLHD 131

Query: 399 IGDE--GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
            G    G   +A       ++  +DL  N I SKGA AIA +L  N ++ +  L    IG
Sbjct: 132 YGIRAVGIAALARTQLHKPSLIGLDLSSNQISSKGAIAIAEMLSKNQLLETFRLCLYQIG 191

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            +GA A++  L  +  +  L L    IG  GA+ +A+ L  N+T+  L L  + + DEGA
Sbjct: 192 DEGAIAIANALMTNSTLKKLDLEGNYIGDEGAKAIAEALMTNSTLKELHLYESNIGDEGA 251

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
             +A +  + N  L  + L    IR  GA A+A  L  N ++ V
Sbjct: 252 IAIANAL-MTNSTLKKLHLHTYGIRAVGAAALADMLYYNTELEV 294



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 97/213 (45%), Gaps = 40/213 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           +  TL EF          D+   N GDEG   +A +L  N T +++     GI A GI A
Sbjct: 92  TNSTLKEF----------DLCDTNIGDEGAIAIANALMTNSTLKKLYLHDYGIRAVGIAA 141

Query: 210 FD----------------------------GVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
                                          +L  N  L+T  L    IGDEG   + + 
Sbjct: 142 LARTQLHKPSLIGLDLSSNQISSKGAIAIAEMLSKNQLLETFRLCLYQIGDEGAIAIANA 201

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L+ N+ +++L L    + DEGAKAIAE L  NS L+ L L  + I   G  ++A AL+ N
Sbjct: 202 LMTNSTLKKLDLEGNYIGDEGAKAIAEALMTNSTLKELHLYESNIGDEGAIAIANALMTN 261

Query: 302 STIRSLHLNGNYG-GALGANALAKGLEGNKSLR 333
           ST++ LHL+  YG  A+GA ALA  L  N  L 
Sbjct: 262 STLKKLHLH-TYGIRAVGAAALADMLYYNTELE 293



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 58/105 (55%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GDEG   +A +L  N T +++    N I   G KA    L +N  LK L+L  + IGDE
Sbjct: 190 IGDEGAIAIANALMTNSTLKKLDLEGNYIGDEGAKAIAEALMTNSTLKELHLYESNIGDE 249

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           G   + + L+ N+ +++L L +  +R  GA A+A++L  N+ L V
Sbjct: 250 GAIAIANALMTNSTLKKLHLHTYGIRAVGAAALADMLYYNTELEV 294


>gi|440791605|gb|ELR12843.1| NLR family, CARD domain containing 3, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 341

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 172/328 (52%), Gaps = 11/328 (3%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           EG  A+   L+    +R L+L +N I  +G  SLA+ +  +  + +L L GN+ G  G  
Sbjct: 6   EGGVALGRALERRVPIRSLDLWSNGIGPAGAASLAKGIFASGHLHTLSLKGNFIGPAGMR 65

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            L+  LEGN ++  L + GN +G EG +AL S L++ +    V   GNN +  +G   +A
Sbjct: 66  ELSSALEGNLTVTTLDVSGNRLGVEGGKALASLLTANQHLKNVYASGNN-LDNEGVAALA 124

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-------ITTIDLGGNNIHSKGAS 433
           E ++   ++  +NL +N I D GA+ IA  L  N+        +T +DLG N+I   GA 
Sbjct: 125 EALRTNATVSTLNLQLNRISDAGAKDIAAILANNKAHTLTGLNLTHLDLGWNHITQVGAR 184

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           ++A +LK N V+  L L  N I A+G   L E L+ +  +  L +  C +  +G   +A 
Sbjct: 185 SLADMLKANRVLCGLGLEGNRITAEGGMYLCESLENNHALTFLNIASCNLRKTGGTSIAA 244

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
           +LR N T+  L ++ NGL  +G + LA   K  N  L  +DL  N I  DGA A+A+  +
Sbjct: 245 LLRKNATLEELIVKKNGLTSQGVQSLADGLK-RNLVLKKLDLCENRIDLDGAVALAEIFR 303

Query: 554 ANEDVAVTSLNLANNFLTKFGQSALTDA 581
            N    +T + LA N LT  G  AL +A
Sbjct: 304 LNN--GLTHVKLAGNALTDEGVFALKEA 329



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 155/312 (49%), Gaps = 8/312 (2%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G EG   L  +L        +   +NGI  AG  +    + ++  L TL+L GN IG  
Sbjct: 3   LGVEGGVALGRALERRVPIRSLDLWSNGIGPAGAASLAKGIFASGHLHTLSLKGNFIGPA 62

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G++ L   L  N  V  L +S   L  EG KA+A LL  N  L+ +  + N +D  G  +
Sbjct: 63  GMRELSSALEGNLTVTTLDVSGNRLGVEGGKALASLLTANQHLKNVYASGNNLDNEGVAA 122

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS-------LRELHLHGNSIGDEG 346
           LAEAL  N+T+ +L+L  N     GA  +A  L  NK+       L  L L  N I   G
Sbjct: 123 LAEALRTNATVSTLNLQLNRISDAGAKDIAAILANNKAHTLTGLNLTHLDLGWNHITQVG 182

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            R+L   L + +  L  L +  N I+A+G  ++ E ++N  +L ++N+   ++   G   
Sbjct: 183 ARSLADMLKANR-VLCGLGLEGNRITAEGGMYLCESLENNHALTFLNIASCNLRKTGGTS 241

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           IA  L++N T+  + +  N + S+G  ++A  LK N V+  LDL  N I  DGA AL+E+
Sbjct: 242 IAALLRKNATLEELIVKKNGLTSQGVQSLADGLKRNLVLKKLDLCENRIDLDGAVALAEI 301

Query: 467 LKFHGNINTLKL 478
            + +  +  +KL
Sbjct: 302 FRLNNGLTHVKL 313



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+SG   G EG   LA  L  NQ  + V  + N +   G+ A    L++N  + TL
Sbjct: 77  VTTLDVSGNRLGVEGGKALASLLTANQHLKNVYASGNNLDNEGVAALAEALRTNATVSTL 136

Query: 224 NLSGNPIGDEGVKCLCDILVDNAG--VERLQLSSVDL-----RDEGAKAIAELLKNNSIL 276
           NL  N I D G K +  IL +N    +  L L+ +DL        GA+++A++LK N +L
Sbjct: 137 NLQLNRISDAGAKDIAAILANNKAHTLTGLNLTHLDLGWNHITQVGARSLADMLKANRVL 196

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L  N I   G   L E+L  N  +  L++        G  ++A  L  N +L EL 
Sbjct: 197 CGLGLEGNRITAEGGMYLCESLENNHALTFLNIASCNLRKTGGTSIAALLRKNATLEELI 256

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           +  N +  +G+++L  GL  R   L  LD+  N I   GA  +AE  +    L  + L  
Sbjct: 257 VKKNGLTSQGVQSLADGL-KRNLVLKKLDLCENRIDLDGAVALAEIFRLNNGLTHVKLAG 315

Query: 397 NDIGDEGAEKIADALKQNRTIT 418
           N + DEG   + +A  +N  +T
Sbjct: 316 NALTDEGVFALKEAATRNTKLT 337



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 8/290 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             ++ + G   G  G+  L+ +L  N T   +  + N +   G KA   +L +N  LK +
Sbjct: 49  LHTLSLKGNFIGPAGMRELSSALEGNLTVTTLDVSGNRLGVEGGKALASLLTANQHLKNV 108

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-------L 276
             SGN + +EGV  L + L  NA V  L L    + D GAK IA +L NN         L
Sbjct: 109 YASGNNLDNEGVAALAEALRTNATVSTLNLQLNRISDAGAKDIAAILANNKAHTLTGLNL 168

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L+L  N I   G  SLA+ L  N  +  L L GN   A G   L + LE N +L  L+
Sbjct: 169 THLDLGWNHITQVGARSLADMLKANRVLCGLGLEGNRITAEGGMYLCESLENNHALTFLN 228

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           +   ++   G  + ++ L  +   L  L +  N ++++G   +A+ +K    L  ++L  
Sbjct: 229 IASCNLRKTGGTS-IAALLRKNATLEELIVKKNGLTSQGVQSLADGLKRNLVLKKLDLCE 287

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           N I  +GA  +A+  + N  +T + L GN +  +G  A+      N+ +T
Sbjct: 288 NRIDLDGAVALAEIFRLNNGLTHVKLAGNALTDEGVFALKEAATRNTKLT 337



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 121/291 (41%), Gaps = 42/291 (14%)

Query: 96  GVFVSATFVLWKLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNL-LSGFTGKLFRESKQTL 154
           G+F S       L    + P   R      EG N +V   T L +SG   +L  E  + L
Sbjct: 42  GIFASGHLHTLSLKGNFIGPAGMRELSSALEG-NLTV---TTLDVSG--NRLGVEGGKAL 95

Query: 155 NEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
                  +   +V  SG N  +EG+  LAE+L  N T   ++   N I+ AG K    +L
Sbjct: 96  ASLLTANQHLKNVYASGNNLDNEGVAALAEALRTNATVSTLNLQLNRISDAGAKDIAAIL 155

Query: 215 QSNIA-----------------------------------LKTLNLSGNPIGDEGVKCLC 239
            +N A                                   L  L L GN I  EG   LC
Sbjct: 156 ANNKAHTLTGLNLTHLDLGWNHITQVGARSLADMLKANRVLCGLGLEGNRITAEGGMYLC 215

Query: 240 DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
           + L +N  +  L ++S +LR  G  +IA LL+ N+ L  L +  N +   G  SLA+ L 
Sbjct: 216 ESLENNHALTFLNIASCNLRKTGGTSIAALLRKNATLEELIVKKNGLTSQGVQSLADGLK 275

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            N  ++ L L  N     GA ALA+    N  L  + L GN++ DEG+ AL
Sbjct: 276 RNLVLKKLDLCENRIDLDGAVALAEIFRLNNGLTHVKLAGNALTDEGVFAL 326



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 6/187 (3%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G EG   +  AL++   I ++DL  N I   GA+++A+ +  +  + +L L  N IG  
Sbjct: 3   LGVEGGVALGRALERRVPIRSLDLWSNGIGPAGAASLAKGIFASGHLHTLSLKGNFIGPA 62

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           G + LS  L+ +  + TL +   ++G  G + +A +L  N  +  +    N L +EG   
Sbjct: 63  GMRELSSALEGNLTVTTLDVSGNRLGVEGGKALASLLTANQHLKNVYASGNNLDNEGVAA 122

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN-----NFLTKF 573
           LA++ +  N  +++++L  N I D GA  IA  L  N+   +T LNL +     N +T+ 
Sbjct: 123 LAEALR-TNATVSTLNLQLNRISDAGAKDIAAILANNKAHTLTGLNLTHLDLGWNHITQV 181

Query: 574 GQSALTD 580
           G  +L D
Sbjct: 182 GARSLAD 188



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 64/132 (48%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           ++  E    L E  +   A + ++++  N    G   +A  L  N T EE+    NG+T+
Sbjct: 205 RITAEGGMYLCESLENNHALTFLNIASCNLRKTGGTSIAALLRKNATLEELIVKKNGLTS 264

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G+++    L+ N+ LK L+L  N I  +G   L +I   N G+  ++L+   L DEG  
Sbjct: 265 QGVQSLADGLKRNLVLKKLDLCENRIDLDGAVALAEIFRLNNGLTHVKLAGNALTDEGVF 324

Query: 265 AIAELLKNNSIL 276
           A+ E    N+ L
Sbjct: 325 ALKEAATRNTKL 336


>gi|320167232|gb|EFW44131.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 573

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/284 (35%), Positives = 166/284 (58%), Gaps = 5/284 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           ++NS++ +L+L+    G LGA  +++  + + +L +L L GN IGD G +A+ + L + +
Sbjct: 14  IKNSSL-ALNLSSKKLGTLGAQTVSQAFKFHPTLAKLVLSGNQIGDAGAQAIGAALRANR 72

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
             L  L + +N I   G   +AE +K+  +L  + L  N I D GA+ IA+AL+    + 
Sbjct: 73  A-LTELILDDNQIGVVGVQAIAEALKSNGTLQSLGLSQNQIDDAGAQAIAEALQTCPPLV 131

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +DL    I   GA AIA+ L  N+ +  L LA N IG  GA+A++E LK + ++  L+L
Sbjct: 132 ALDLRRGQIGDVGALAIAQALLQNTCLAELGLAQNRIGVIGAQAIAEALKSNTSLRCLRL 191

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
              +IG +GA  +A+ L+ N T+  L L +N + D GA+ +A + K  N  LT ++L  N
Sbjct: 192 FDNEIGDAGASAIAEALKVNTTLDALHLNSNQISDVGAQAIADALKS-NSGLTYLNLERN 250

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 582
           EI +DGA AI++AL+AN  + +TSL  + +   + GQ+  T ++
Sbjct: 251 EIGEDGAQAISKALEAN--MTLTSLYTSMSDRRQAGQALATQSR 292



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 154/280 (55%), Gaps = 4/280 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           ++++ +KN+S+   L L++  +   G  ++++A   + T+  L L+GN  G  GA A+  
Sbjct: 9   SLSDRIKNSSL--ALNLSSKKLGTLGAQTVSQAFKFHPTLAKLVLSGNQIGDAGAQAIGA 66

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N++L EL L  N IG  G++A+   L S  G L  L +  N I   GA  +AE ++
Sbjct: 67  ALRANRALTELILDDNQIGVVGVQAIAEALKS-NGTLQSLGLSQNQIDDAGAQAIAEALQ 125

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            C  L+ ++L    IGD GA  IA AL QN  +  + L  N I   GA AIA  LK N+ 
Sbjct: 126 TCPPLVALDLRRGQIGDVGALAIAQALLQNTCLAELGLAQNRIGVIGAQAIAEALKSNTS 185

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N IG  GA A++E LK +  ++ L L   QI   GA+ +AD L+ N+ ++ L
Sbjct: 186 LRCLRLFDNEIGDAGASAIAEALKVNTTLDALHLNSNQISDVGAQAIADALKSNSGLTYL 245

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
           +L  N + ++GA+ ++++ +  N  LTS+  + ++ R  G
Sbjct: 246 NLERNEIGEDGAQAISKALE-ANMTLTSLYTSMSDRRQAG 284



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 142/255 (55%), Gaps = 1/255 (0%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++++S +  G  G   ++++  ++ T  ++  + N I  AG +A    L++N AL  L L
Sbjct: 20  ALNLSSKKLGTLGAQTVSQAFKFHPTLAKLVLSGNQIGDAGAQAIGAALRANRALTELIL 79

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             N IG  GV+ + + L  N  ++ L LS   + D GA+AIAE L+    L  L+L    
Sbjct: 80  DDNQIGVVGVQAIAEALKSNGTLQSLGLSQNQIDDAGAQAIAEALQTCPPLVALDLRRGQ 139

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I   G  ++A+ALL+N+ +  L L  N  G +GA A+A+ L+ N SLR L L  N IGD 
Sbjct: 140 IGDVGALAIAQALLQNTCLAELGLAQNRIGVIGAQAIAEALKSNTSLRCLRLFDNEIGDA 199

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  A+   L      L  L + +N IS  GA  +A+ +K+   L ++NL  N+IG++GA+
Sbjct: 200 GASAIAEALKVNT-TLDALHLNSNQISDVGAQAIADALKSNSGLTYLNLERNEIGEDGAQ 258

Query: 406 KIADALKQNRTITTI 420
            I+ AL+ N T+T++
Sbjct: 259 AISKALEANMTLTSL 273



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 106/195 (54%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           RA + + +     G  G+  +AE+L  N T + +  + N I  AG +A    LQ+   L 
Sbjct: 72  RALTELILDDNQIGVVGVQAIAEALKSNGTLQSLGLSQNQIDDAGAQAIAEALQTCPPLV 131

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L    IGD G   +   L+ N  +  L L+   +   GA+AIAE LK+N+ LR L L
Sbjct: 132 ALDLRRGQIGDVGALAIAQALLQNTCLAELGLAQNRIGVIGAQAIAEALKSNTSLRCLRL 191

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I  +G +++AEAL  N+T+ +LHLN N    +GA A+A  L+ N  L  L+L  N 
Sbjct: 192 FDNEIGDAGASAIAEALKVNTTLDALHLNSNQISDVGAQAIADALKSNSGLTYLNLERNE 251

Query: 342 IGDEGIRALMSGLSS 356
           IG++G +A+   L +
Sbjct: 252 IGEDGAQAISKALEA 266



 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 50/111 (45%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K   +   + +     GD G   +AE+L  N T + +   +N I+  G +A  
Sbjct: 174 QAIAEALKSNTSLRCLRLFDNEIGDAGASAIAEALKVNTTLDALHLNSNQISDVGAQAIA 233

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
             L+SN  L  LNL  N IG++G + +   L  N  +  L  S  D R  G
Sbjct: 234 DALKSNSGLTYLNLERNEIGEDGAQAISKALEANMTLTSLYTSMSDRRQAG 284


>gi|32966217|gb|AAP92145.1| leucine-rich repeat protein N6C [synthetic construct]
          Length = 415

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 168/335 (50%), Gaps = 4/335 (1%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERL 251
           E++    N +T AG+K    VL+SN +L+ L+LS N +GD GV+ L   L+D    +E L
Sbjct: 42  EQLKLNKNDLTEAGLKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLESL 101

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLN 310
           +L S DL + G K +A +L++N  LR L L+ N +  +G   L + LL+  T +  L LN
Sbjct: 102 KLQSTDLTEAGLKDLASVLRSNPSLRELNLSTNKLGDAGVRLLLQGLLDPGTRLEKLDLN 161

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                  G   LA  L  N SLREL L  N +GD G+R L+ GL     +L  L + +N 
Sbjct: 162 DTDLTEAGVKDLASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLEDND 221

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHS 429
           ++  G   +A  +++  SL  +NL  N +GD G   +   L    T +  + L   ++  
Sbjct: 222 LTEAGLKDLASVLRSNPSLRELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTDLTE 281

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGA 488
            G   +A VL+ N  +  L L+ N +G  G + L + L   G  +  L L    +  +G 
Sbjct: 282 AGVEDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTDLTEAGM 341

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
           + +A +LR N ++  L L  N L D G + L Q  
Sbjct: 342 KDLASVLRSNPSLRELSLSTNKLGDAGVRLLLQGL 376



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 164/332 (49%), Gaps = 5/332 (1%)

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-I 304
           A +E+L+L+  DL + G K +A +L++N  LR L L+NN +  +G   L + LL+  T +
Sbjct: 39  ARLEQLKLNKNDLTEAGLKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRL 98

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            SL L        G   LA  L  N SLREL+L  N +GD G+R L+ GL     +L  L
Sbjct: 99  ESLKLQSTDLTEAGLKDLASVLRSNPSLRELNLSTNKLGDAGVRLLLQGLLDPGTRLEKL 158

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLG 423
           D+ +  ++  G   +A  +++  SL  ++L  N +GD G   +   L    T +  + L 
Sbjct: 159 DLNDTDLTEAGVKDLASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLE 218

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQ 482
            N++   G   +A VL+ N  +  L+L+ N +G  G + L + L   G  +  L+L    
Sbjct: 219 DNDLTEAGLKDLASVLRSNPSLRELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTD 278

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +  +G E +A +LR N ++  L L  N L D G + L Q        L  + L   ++ +
Sbjct: 279 LTEAGVEDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTDLTE 338

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            G   +A  L++N   ++  L+L+ N L   G
Sbjct: 339 AGMKDLASVLRSNP--SLRELSLSTNKLGDAG 368



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 134/264 (50%), Gaps = 6/264 (2%)

Query: 154 LNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKA 209
           L + A  LR+  S+   ++S    GD G+  L + L    T  E++      +T AG+K 
Sbjct: 113 LKDLASVLRSNPSLRELNLSTNKLGDAGVRLLLQGLLDPGTRLEKLDLNDTDLTEAGVKD 172

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAE 268
              VL+SN +L+ L+LS N +GD GV+ L   L+D    +E+L L   DL + G K +A 
Sbjct: 173 LASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLEDNDLTEAGLKDLAS 232

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLE 327
           +L++N  LR L L++N +  +G   L + LL+  T +  L L        G   LA  L 
Sbjct: 233 VLRSNPSLRELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTDLTEAGVEDLASVLR 292

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            N SLREL L  N +GD G+R L+ GL     +L  L + N  ++  G   +A  +++  
Sbjct: 293 SNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTDLTEAGMKDLASVLRSNP 352

Query: 388 SLLWINLYMNDIGDEGAEKIADAL 411
           SL  ++L  N +GD G   +   L
Sbjct: 353 SLRELSLSTNKLGDAGVRLLLQGL 376


>gi|290997674|ref|XP_002681406.1| predicted protein [Naegleria gruberi]
 gi|284095030|gb|EFC48662.1| predicted protein [Naegleria gruberi]
          Length = 426

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 219/433 (50%), Gaps = 86/433 (19%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           +++  +S+D+ G   GDEG  F++E     +    +S   N I A G +    + Q    
Sbjct: 48  KMKQLTSLDIGGNQIGDEGAKFISEM----KQLTSLSIYNNLIGAVGFEFISEMKQ---- 99

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNS 274
           L +L++  N IGDEGVK +C         E  QL+S+ +      DEG K I+E+ +   
Sbjct: 100 LTSLDICYNEIGDEGVKSIC---------EMKQLTSLSIYNNRIGDEGVKFISEMKQ--- 147

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK---------- 324
            L  L++NNN I   G    A+++ E   + SL +  N  GA+GA  +++          
Sbjct: 148 -LTSLDINNNRIGVQG----AKSICEMKQLTSLSIYNNQTGAVGAKFISEMKQLTSLDIS 202

Query: 325 ----GLEGNKSLRE------LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
               G+EG K + E      L++  N IG EG++     L S   +L  LDIG N I  +
Sbjct: 203 VNEIGVEGAKFISEMKQLTSLNICYNRIGAEGVK-----LISEMKQLTSLDIGGNEIGDE 257

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA    ++I   K L  +N+  N IGDEGA+ I++     + +T++    N I  +G   
Sbjct: 258 GA----KFISEMKQLTSLNICENQIGDEGAKSISEM----KQLTSLGAYNNEIGVEGTKL 309

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           I+ + +    +TSL+++ N IG +GAK +SE+ +      +L + + +IG  G + +++M
Sbjct: 310 ISEMKQ----LTSLNISKNQIGDEGAKLISEMKQLA----SLDIYYNEIGDEGVKLISEM 361

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            +  +    L++  N + DEGAK +++      + LTS+D+ FNEI D+G   I++  + 
Sbjct: 362 KQLKS----LNISKNQIGDEGAKLISEM-----KQLTSLDIHFNEIGDEGVKLISEMKQ- 411

Query: 555 NEDVAVTSLNLAN 567
                +TSL++ N
Sbjct: 412 -----LTSLSIYN 419



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 196/385 (50%), Gaps = 68/385 (17%)

Query: 220 LKTLNLSGNPIGDEGVKCLC--------DILVDNAG------VERL-QLSSVDLR----- 259
           LK+L++  N IG  G K +         DI+ +  G      + ++ QL+S+D+      
Sbjct: 4   LKSLDIGENQIGAVGAKFISEMKQLTSLDIIYNRIGAVGAKLISKMKQLTSLDIGGNQIG 63

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGAK I+E+ +    L  L + NN+I   GF  ++E       + SL +  N  G  G 
Sbjct: 64  DEGAKFISEMKQ----LTSLSIYNNLIGAVGFEFISEM----KQLTSLDICYNEIGDEGV 115

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            ++ +     K L  L ++ N IGDEG++ +     S   +L  LDI NN I  +GA  +
Sbjct: 116 KSICE----MKQLTSLSIYNNRIGDEGVKFI-----SEMKQLTSLDINNNRIGVQGAKSI 166

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E     K L  +++Y N  G  GA+ I++     + +T++D+  N I  +GA  I+ + 
Sbjct: 167 CEM----KQLTSLSIYNNQTGAVGAKFISEM----KQLTSLDISVNEIGVEGAKFISEMK 218

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           +    +TSL++ YN IGA+G K +SE+ +    + +L +G  +IG  GA+F+++M     
Sbjct: 219 Q----LTSLNICYNRIGAEGVKLISEMKQ----LTSLDIGGNEIGDEGAKFISEM----K 266

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
            ++ L++  N + DEGAK +++      + LTS+    NEI  +G   I++  +      
Sbjct: 267 QLTSLNICENQIGDEGAKSISEM-----KQLTSLGAYNNEIGVEGTKLISEMKQ------ 315

Query: 560 VTSLNLANNFLTKFGQSALTDAKDL 584
           +TSLN++ N +   G   +++ K L
Sbjct: 316 LTSLNISKNQIGDEGAKLISEMKQL 340



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 128/264 (48%), Gaps = 61/264 (23%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           +L  LDIG N I A G    A++I   K L  +++  N IG  GA K+   +KQ   +T+
Sbjct: 3   QLKSLDIGENQIGAVG----AKFISEMKQLTSLDIIYNRIGAVGA-KLISKMKQ---LTS 54

Query: 420 IDLGGNNIHSKGASAIARVLKDNSV--------------------ITSLDLAYNPIGADG 459
           +D+GGN I  +GA  I+ + +  S+                    +TSLD+ YN IG +G
Sbjct: 55  LDIGGNQIGDEGAKFISEMKQLTSLSIYNNLIGAVGFEFISEMKQLTSLDICYNEIGDEG 114

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
            K++ E+ +    + +L +   +IG  G +F+++M      ++ LD+  N +  +GAK +
Sbjct: 115 VKSICEMKQ----LTSLSIYNNRIGDEGVKFISEM----KQLTSLDINNNRIGVQGAKSI 166

Query: 520 AQ-----SFKVVN--------------EALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
            +     S  + N              + LTS+D++ NEI  +GA  I++  +      +
Sbjct: 167 CEMKQLTSLSIYNNQTGAVGAKFISEMKQLTSLDISVNEIGVEGAKFISEMKQ------L 220

Query: 561 TSLNLANNFLTKFGQSALTDAKDL 584
           TSLN+  N +   G   +++ K L
Sbjct: 221 TSLNICYNRIGAEGVKLISEMKQL 244


>gi|290987507|ref|XP_002676464.1| predicted protein [Naegleria gruberi]
 gi|284090066|gb|EFC43720.1| predicted protein [Naegleria gruberi]
          Length = 631

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 198/396 (50%), Gaps = 10/396 (2%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GDE    L + L  N T   V    N +   G      +L++N ++  L+L  N +G +
Sbjct: 86  LGDEAAKSLTKILSKNNTYTIVDLCGNRLRDTGCIELAPLLENNTSIVRLDLRSNDVGGK 145

Query: 234 GVKCLCDILVDNAGVERLQLSSVD------LRDEGAKAIAELLKNNSILRVLELNNNMID 287
           G K L + L+ N  +  L LS +       +  +GAK ++ELL+ N  L  L L +N + 
Sbjct: 146 GAKALFNALLFNQTLTSLDLSGLSGINRNHISTKGAKHLSELLQQNQTLCQLNLASNGMG 205

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
             G   L   L++N ++  L ++ N  G+ G   LAK L+   +L++L +  N IGD+G+
Sbjct: 206 SDGIRILCRGLVDNFSLTELDISSNNIGSAGCEFLAKVLDST-NLQKLIMERNQIGDKGV 264

Query: 348 RALMSGLSSR-KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             +   + +     L   D+  N IS +G   + E +K  K L  + +  N+ GD+GAE+
Sbjct: 265 SIMCDKMKNMLTPTLTYWDLTENKISHEGVLSICEMLKIDKCLKTLKIECNEFGDKGAEE 324

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
            A  L+ N+T+  + LG N I  +GA  I +V+  N  + +L L  N I   G K +   
Sbjct: 325 FAQLLEINKTLKKLFLGENAIGDEGAKEIGKVMALNKTLKTLFLNNNLIKDSGTKRIMIG 384

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
           L     +  L L + +IG      +A +L  N ++  L+L+ N L++ G + +A++ +  
Sbjct: 385 LTDGTKLKHLDLSFNRIGDRAGVEIARVLATNRSLKTLNLKQNELKESGEQ-IAEAMR-K 442

Query: 527 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
           N +LTS+D +FN+        I++ALK N+ +  +S
Sbjct: 443 NFSLTSMDFSFNDFSYKSFSFISEALKRNDKLLKSS 478



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 188/375 (50%), Gaps = 13/375 (3%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F  ++Q N +    +L  + +GDE  K L  IL  N     + L    LRD G   +A L
Sbjct: 66  FVDLIQKNCSGLLFSLKEHGLGDEAAKSLTKILSKNNTYTIVDLCGNRLRDTGCIELAPL 125

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG------NYGGALGANALA 323
           L+NN+ +  L+L +N +   G  +L  ALL N T+ SL L+G      N+    GA  L+
Sbjct: 126 LENNTSIVRLDLRSNDVGGKGAKALFNALLFNQTLTSLDLSGLSGINRNHISTKGAKHLS 185

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L+ N++L +L+L  N +G +GIR L  GL      L  LDI +N+I + G   +A+ +
Sbjct: 186 ELLQQNQTLCQLNLASNGMGSDGIRILCRGLVDN-FSLTELDISSNNIGSAGCEFLAKVL 244

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQ--NRTITTIDLGGNNIHSKGASAIARVLKD 441
            +  +L  + +  N IGD+G   + D +K     T+T  DL  N I  +G  +I  +LK 
Sbjct: 245 -DSTNLQKLIMERNQIGDKGVSIMCDKMKNMLTPTLTYWDLTENKISHEGVLSICEMLKI 303

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           +  + +L +  N  G  GA+  +++L+ +  +  L LG   IG  GA+ +  ++  N T+
Sbjct: 304 DKCLKTLKIECNEFGDKGAEEFAQLLEINKTLKKLFLGENAIGDEGAKEIGKVMALNKTL 363

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
             L L  N ++D G K +          L  +DL+FN I D     IA+ L  N   ++ 
Sbjct: 364 KTLFLNNNLIKDSGTKRIMIGL-TDGTKLKHLDLSFNRIGDRAGVEIARVLATNR--SLK 420

Query: 562 SLNLANNFLTKFGQS 576
           +LNL  N L + G+ 
Sbjct: 421 TLNLKQNELKESGEQ 435



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 30/223 (13%)

Query: 168 DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           D++      EG+  + E L  ++  + +    N     G + F  +L+ N  LK L L  
Sbjct: 283 DLTENKISHEGVLSICEMLKIDKCLKTLKIECNEFGDKGAEEFAQLLEINKTLKKLFLGE 342

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N IG                            DEGAK I +++  N  L+ L LNNN+I 
Sbjct: 343 NAIG----------------------------DEGAKEIGKVMALNKTLKTLFLNNNLIK 374

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
            SG   +   L + + ++ L L+ N  G      +A+ L  N+SL+ L+L  N + + G 
Sbjct: 375 DSGTKRIMIGLTDGTKLKHLDLSFNRIGDRAGVEIARVLATNRSLKTLNLKQNELKESGE 434

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +  ++    +   L  +D   N  S K    ++E +K    LL
Sbjct: 435 Q--IAEAMRKNFSLTSMDFSFNDFSYKSFSFISEALKRNDKLL 475



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 1/168 (0%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E   ++ E  K  +   ++ +    FGD+G    A+ L  N+T +++    N I  
Sbjct: 288 KISHEGVLSICEMLKIDKCLKTLKIECNEFGDKGAEEFAQLLEINKTLKKLFLGENAIGD 347

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K    V+  N  LKTL L+ N I D G K +   L D   ++ L LS   + D    
Sbjct: 348 EGAKEIGKVMALNKTLKTLFLNNNLIKDSGTKRIMIGLTDGTKLKHLDLSFNRIGDRAGV 407

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            IA +L  N  L+ L L  N +  SG   +AEA+ +N ++ S+  + N
Sbjct: 408 EIARVLATNRSLKTLNLKQNELKESG-EQIAEAMRKNFSLTSMDFSFN 454


>gi|320165823|gb|EFW42722.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 465

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/250 (40%), Positives = 140/250 (56%), Gaps = 4/250 (1%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L+   IGD G RA+   L   K  L  L++G N I + GA  +AE +K   +L  + L
Sbjct: 24  LDLNQEQIGDAGARAIAEALKVNK-TLTSLNLGWNQIGSDGAQEIAEALKVNTTLTKLYL 82

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N+I + GA  IA+ALK NRT+T + L    I   GA AIA  L+ N+ +T LDL  N 
Sbjct: 83  ESNEIANAGALAIAEALKVNRTLTELYLRDTRIGGAGAQAIAEALRVNTKLTLLDLEVNQ 142

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA+A +E LK +  ++ L L   QIG +GA  +A+ L  N  +  L L AN + D 
Sbjct: 143 IGDTGAQAFAEALKVNTTLSWLLLWQNQIGDAGALAIAEALEGNTMLEYLFLEANQITDV 202

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           GA+ +A++ K VN  L  + L  N+I D GA AIA ALK N    +TSL L  N +   G
Sbjct: 203 GAQAIAEAPK-VNTRLEILYLEVNQIGDTGAQAIADALKVN--TTLTSLTLQGNCIGNVG 259

Query: 575 QSALTDAKDL 584
             A+ +A+++
Sbjct: 260 VQAIDEARNV 269



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 145/286 (50%), Gaps = 29/286 (10%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           E L L+   + D GA+AIAE LK N  L  L L  N I   G   +AEAL  N+T+  L+
Sbjct: 22  ESLDLNQEQIGDAGARAIAEALKVNKTLTSLNLGWNQIGSDGAQEIAEALKVNTTLTKLY 81

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L  N     GA A+A+ L+ N++L EL+L    IG  G +A                   
Sbjct: 82  LESNEIANAGALAIAEALKVNRTLTELYLRDTRIGGAGAQA------------------- 122

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
                     +AE ++    L  ++L +N IGD GA+  A+ALK N T++ + L  N I 
Sbjct: 123 ----------IAEALRVNTKLTLLDLEVNQIGDTGAQAFAEALKVNTTLSWLLLWQNQIG 172

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA AIA  L+ N+++  L L  N I   GA+A++E  K +  +  L L   QIG +GA
Sbjct: 173 DAGALAIAEALEGNTMLEYLFLEANQITDVGAQAIAEAPKVNTRLEILYLEVNQIGDTGA 232

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
           + +AD L+ N T++ L L+ N + + G + + ++  V +    SID
Sbjct: 233 QAIADALKVNTTLTSLTLQGNCIGNVGVQAIDEARNVNDTIEVSID 278



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 149/312 (47%), Gaps = 36/312 (11%)

Query: 150 SKQTLNEFAK----ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           S Q++ E  +    ++ A  S+D++    GD G   +AE+L  N+T   ++   N I + 
Sbjct: 3   SDQSMTERQRVLYDQVNASESLDLNQEQIGDAGARAIAEALKVNKTLTSLNLGWNQIGSD 62

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G +     L+ N  L  L L  N I + G   + + L  N  +  L L    +   GA+A
Sbjct: 63  GAQEIAEALKVNTTLTKLYLESNEIANAGALAIAEALKVNRTLTELYLRDTRIGGAGAQA 122

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           IAE L+ N+ L +L+L  N I  +G  + AEAL  N+T+  L L  N  G  GA A+A+ 
Sbjct: 123 IAEALRVNTKLTLLDLEVNQIGDTGAQAFAEALKVNTTLSWLLLWQNQIGDAGALAIAEA 182

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           LEGN  L  L L  N I D G +A                             +AE  K 
Sbjct: 183 LEGNTMLEYLFLEANQITDVGAQA-----------------------------IAEAPKV 213

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI--ARVLKDNS 443
              L  + L +N IGD GA+ IADALK N T+T++ L GN I + G  AI  AR + D +
Sbjct: 214 NTRLEILYLEVNQIGDTGAQAIADALKVNTTLTSLTLQGNCIGNVGVQAIDEARNVND-T 272

Query: 444 VITSLDLAYNPI 455
           +  S+D   +P+
Sbjct: 273 IEVSIDGQMHPL 284



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/137 (40%), Positives = 83/137 (60%), Gaps = 1/137 (0%)

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           ++DL    I   GA AIA  LK N  +TSL+L +N IG+DGA+ ++E LK +  +  L L
Sbjct: 23  SLDLNQEQIGDAGARAIAEALKVNKTLTSLNLGWNQIGSDGAQEIAEALKVNTTLTKLYL 82

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
              +I  +GA  +A+ L+ N T++ L LR   +   GA+ +A++ + VN  LT +DL  N
Sbjct: 83  ESNEIANAGALAIAEALKVNRTLTELYLRDTRIGGAGAQAIAEALR-VNTKLTLLDLEVN 141

Query: 539 EIRDDGAFAIAQALKAN 555
           +I D GA A A+ALK N
Sbjct: 142 QIGDTGAQAFAEALKVN 158



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 8/203 (3%)

Query: 145 KLFRESKQTLN-------EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF 197
           KL+ ES +  N       E  K  R  + + +     G  G   +AE+L  N     +  
Sbjct: 79  KLYLESNEIANAGALAIAEALKVNRTLTELYLRDTRIGGAGAQAIAEALRVNTKLTLLDL 138

Query: 198 AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
             N I   G +AF   L+ N  L  L L  N IGD G   + + L  N  +E L L +  
Sbjct: 139 EVNQIGDTGAQAFAEALKVNTTLSWLLLWQNQIGDAGALAIAEALEGNTMLEYLFLEANQ 198

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           + D GA+AIAE  K N+ L +L L  N I  +G  ++A+AL  N+T+ SL L GN  G +
Sbjct: 199 ITDVGAQAIAEAPKVNTRLEILYLEVNQIGDTGAQAIADALKVNTTLTSLTLQGNCIGNV 258

Query: 318 GANALAKGLEGNKSLRELHLHGN 340
           G  A+ +    N ++ E+ + G 
Sbjct: 259 GVQAIDEARNVNDTI-EVSIDGQ 280


>gi|407849923|gb|EKG04494.1| hypothetical protein TCSYLVIO_004444 [Trypanosoma cruzi]
          Length = 738

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 205/401 (51%), Gaps = 23/401 (5%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F  ++ +N   K   L  +  G    + +  IL +N     L LS   LRDEGA +IA+L
Sbjct: 126 FMELISANCRGKFFCLKESGFGPMCAEAIAHILSNNRKYTILDLSGNRLRDEGACSIAKL 185

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALA 323
           ++ N  +  + L +N I + G  +LA ALLEN+T+ SL L      NGN+    GA A+ 
Sbjct: 186 IRINRTIVHVGLRSNDIGHIGGVALARALLENNTVVSLDLGAHSGINGNHIATEGAEAIG 245

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV--LDIGNNSISAKGAFHVAE 381
             L  NK L  L+L  N +G  G+  ++ GL    G  +V  LDI  N++   G   +A 
Sbjct: 246 VMLRANKVLSHLNLSSNGLGVSGVSFIVGGLD---GNCSVKHLDISVNNLGYAGIKALAP 302

Query: 382 YIKNCKSLLWINLYMNDIGDEGA----EKIADALKQNR-TITTIDLGGNNIHSKGASAIA 436
            ++    +  ++L  N +GD G     + IA+A++     +  ++L  N +  K A A+ 
Sbjct: 303 VLETT-CITHLSLQRNSMGDNGGMVLFKAIAEAIEDGEDKLEYLNLEVNELGEKTAKAMQ 361

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           RVL  ++ + +L L+YN  G   +K + E L  +  + +L L +C+I  +    V   L 
Sbjct: 362 RVLSSSTALKTLRLSYNSFGG-ASKYIMEGLAENKYLRSLFLSFCEIREADGAAVGAALT 420

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            N+T+  LDL  N L+D G+KC+A++ K  N+ L S++L+ N+I D G  AIA  L +N 
Sbjct: 421 ANSTLQHLDLSNNKLKDAGSKCIAEAMK-TNKGLISLNLSCNKIADGGGKAIALFLTSNR 479

Query: 557 DVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
              +  LNL  N ++      L D   L   M+ +++N+ F
Sbjct: 480 --TLRELNLRRNCMSNATGELLDD--QLRGNMTLEKMNVGF 516



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 169/363 (46%), Gaps = 16/363 (4%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R ++ +D+SG    DEG   +A+ +  N+T   V   +N I   G  A    L  N  + 
Sbjct: 162 RKYTILDLSGNRLRDEGACSIAKLIRINRTIVHVGLRSNDIGHIGGVALARALLENNTVV 221

Query: 222 TLNL------SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +L+L      +GN I  EG + +  +L  N  +  L LSS  L   G   I   L  N  
Sbjct: 222 SLDLGAHSGINGNHIATEGAEAIGVMLRANKVLSHLNLSSNGLGVSGVSFIVGGLDGNCS 281

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN----GNYGGALGANALAKGLE-GNK 330
           ++ L+++ N + Y+G  +LA  +LE + I  L L     G+ GG +   A+A+ +E G  
Sbjct: 282 VKHLDISVNNLGYAGIKALA-PVLETTCITHLSLQRNSMGDNGGMVLFKAIAEAIEDGED 340

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L  L+L  N +G++  +A+   LSS    L  L +  NS      + + E +   K L 
Sbjct: 341 KLEYLNLEVNELGEKTAKAMQRVLSSSTA-LKTLRLSYNSFGGASKY-IMEGLAENKYLR 398

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + L   +I +     +  AL  N T+  +DL  N +   G+  IA  +K N  + SL+L
Sbjct: 399 SLFLSFCEIREADGAAVGAALTANSTLQHLDLSNNKLKDAGSKCIAEAMKTNKGLISLNL 458

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGW-CQIGASGAEFVADMLRYNNTISILDLRAN 509
           + N I   G KA++  L  +  +  L L   C   A+G E + D LR N T+  +++  N
Sbjct: 459 SCNKIADGGGKAIALFLTSNRTLRELNLRRNCMSNATG-ELLDDQLRGNMTLEKMNVGFN 517

Query: 510 GLR 512
             R
Sbjct: 518 DFR 520



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 5/174 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A  ++ +S  +FG    + + E L  N+    +  +   I  A   A    L +N  L+ 
Sbjct: 369 ALKTLRLSYNSFGGASKYIM-EGLAENKYLRSLFLSFCEIREADGAAVGAALTANSTLQH 427

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N + D G KC+ + +  N G+  L LS   + D G KAIA  L +N  LR L L 
Sbjct: 428 LDLSNNKLKDAGSKCIAEAMKTNKGLISLNLSCNKIADGGGKAIALFLTSNRTLRELNLR 487

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGN---YGGALGANA-LAKGLEGNKSL 332
            N +  +    L + L  N T+  +++  N   Y   +G  A LA+  E NKSL
Sbjct: 488 RNCMSNATGELLDDQLRGNMTLEKMNVGFNDFRYKSLIGHRATLARNAEKNKSL 541


>gi|330842768|ref|XP_003293343.1| hypothetical protein DICPUDRAFT_158160 [Dictyostelium purpureum]
 gi|325076341|gb|EGC30135.1| hypothetical protein DICPUDRAFT_158160 [Dictyostelium purpureum]
          Length = 619

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 159/302 (52%), Gaps = 1/302 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L +  K  +  + ++      GD+G   +A+++ +N+    V    N +    IKA    
Sbjct: 264 LAKMLKTSKVLTKLEFGKNELGDDGGIAMADAIKFNKLICVVRLNWNKLGVKAIKALSDA 323

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+SN ++  L+LS N  GDEG++CL D L  N  +  L LS V     G KA+A+ L+ N
Sbjct: 324 LKSNTSVYQLDLSFNNFGDEGLQCLSDSLKVNKSIRTLDLSRVASGVVGHKALADSLRIN 383

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           S ++ L+L N  I   G   LA +L++N +I +L LN N        ALAK LE N +L 
Sbjct: 384 SFIQSLDLTNCRITNEGGIELANSLVDNKSISTLVLNNNTFSKDTVVALAKTLEKNSTLT 443

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L  NS+  +G+  L   LS+    L  +D+ NN + ++G   +++YI  C S+  + 
Sbjct: 444 SLSLVNNSLTIDGVEDLFKSLSTSNKTLIKIDLTNNLLGSQGGETISKYIPKC-SISELI 502

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N +  +GA  I +A+  N +I T+D+  N+I S     +  VLK+++ I  ++++ N
Sbjct: 503 LTNNQLETQGASSILNAVATNSSIQTLDISNNSIGSDVVEPLCSVLKESNSILKINVSTN 562

Query: 454 PI 455
            +
Sbjct: 563 KL 564



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 237/495 (47%), Gaps = 22/495 (4%)

Query: 103 FVLWKLVEKL----LMPK--------PSRPSKPTAE----GMNWSVGAGTNLLSGFTGKL 146
           FV + LV KL    ++PK         S+PS+P  E    G+     + T+    FT  +
Sbjct: 31  FVNYTLVCKLWTIEVLPKAWSEMTIATSQPSEPLIEYSQDGILARFPSVTSEPYNFTKLI 90

Query: 147 FRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
            R  K  ++E+  ++++ +++D+   +  +  +  LA++L  N++   ++   N +   G
Sbjct: 91  MRVGK--VSEYIDKIKSLTTIDLKNNSATNYVIDRLADALKTNKSVTYLNLYNNRLMQKG 148

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
                  L+ N ++  L+L  N +G  G   + D L  N  +  L LS   L   GA  I
Sbjct: 149 GTVIANALKKNQSITHLDLGLNLLGANGGTAIADALKVNNTLVNLDLSGNQLGLRGAGPI 208

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
            E LK N  ++ L L++N +       LA+ L +N     L LN N  GA G  ALAK L
Sbjct: 209 VEALKVNKSIKYLYLSSNQLRDECSLPLADILRQNMGFVELALNDNEIGAKGGIALAKML 268

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           + +K L +L    N +GD+G  A+   +   K  + V+ +  N +  K    +++ +K+ 
Sbjct: 269 KTSKVLTKLEFGKNELGDDGGIAMADAIKFNK-LICVVRLNWNKLGVKAIKALSDALKSN 327

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
            S+  ++L  N+ GDEG + ++D+LK N++I T+DL        G  A+A  L+ NS I 
Sbjct: 328 TSVYQLDLSFNNFGDEGLQCLSDSLKVNKSIRTLDLSRVASGVVGHKALADSLRINSFIQ 387

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           SLDL    I  +G   L+  L  + +I+TL L            +A  L  N+T++ L L
Sbjct: 388 SLDLTNCRITNEGGIELANSLVDNKSISTLVLNNNTFSKDTVVALAKTLEKNSTLTSLSL 447

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
             N L  +G + L +S    N+ L  IDL  N +   G   I++ +      +++ L L 
Sbjct: 448 VNNSLTIDGVEDLFKSLSTSNKTLIKIDLTNNLLGSQGGETISKYIPK---CSISELILT 504

Query: 567 NNFLTKFGQSALTDA 581
           NN L   G S++ +A
Sbjct: 505 NNQLETQGASSILNA 519



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 208/434 (47%), Gaps = 8/434 (1%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ +  +L ++    +    K+ ++ + +D+     G  G   +A++L  N T   +  +
Sbjct: 137 LNLYNNRLMQKGGTVIANALKKNQSITHLDLGLNLLGANGGTAIADALKVNNTLVNLDLS 196

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G       L+ N ++K L LS N + DE    L DIL  N G   L L+  ++
Sbjct: 197 GNQLGLRGAGPIVEALKVNKSIKYLYLSSNQLRDECSLPLADILRQNMGFVELALNDNEI 256

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
             +G  A+A++LK + +L  LE   N +   G  ++A+A+  N  I  + LN N  G   
Sbjct: 257 GAKGGIALAKMLKTSKVLTKLEFGKNELGDDGGIAMADAIKFNKLICVVRLNWNKLGVKA 316

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             AL+  L+ N S+ +L L  N+ GDEG++ L   L   K  +  LD+   +    G   
Sbjct: 317 IKALSDALKSNTSVYQLDLSFNNFGDEGLQCLSDSLKVNKS-IRTLDLSRVASGVVGHKA 375

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A+ ++    +  ++L    I +EG  ++A++L  N++I+T+ L  N        A+A+ 
Sbjct: 376 LADSLRINSFIQSLDLTNCRITNEGGIELANSLVDNKSISTLVLNNNTFSKDTVVALAKT 435

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ--IGASGAEFVADMLR 496
           L+ NS +TSL L  N +  DG + L + L    N   +K+      +G+ G E ++  + 
Sbjct: 436 LEKNSTLTSLSLVNNSLTIDGVEDLFKSLS-TSNKTLIKIDLTNNLLGSQGGETISKYIP 494

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
              +IS L L  N L  +GA  +  +    N ++ ++D++ N I  D    +   LK  E
Sbjct: 495 -KCSISELILTNNQLETQGASSILNAV-ATNSSIQTLDISNNSIGSDVVEPLCSVLK--E 550

Query: 557 DVAVTSLNLANNFL 570
             ++  +N++ N L
Sbjct: 551 SNSILKINVSTNKL 564



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 190/391 (48%), Gaps = 4/391 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     DE    LA+ L  N    E++   N I A G  A   +L+++  L  L    N
Sbjct: 223 LSSNQLRDECSLPLADILRQNMGFVELALNDNEIGAKGGIALAKMLKTSKVLTKLEFGKN 282

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            +GD+G   + D +  N  +  ++L+   L  +  KA+++ LK+N+ +  L+L+ N    
Sbjct: 283 ELGDDGGIAMADAIKFNKLICVVRLNWNKLGVKAIKALSDALKSNTSVYQLDLSFNNFGD 342

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G   L+++L  N +IR+L L+    G +G  ALA  L  N  ++ L L    I +EG  
Sbjct: 343 EGLQCLSDSLKVNKSIRTLDLSRVASGVVGHKALADSLRINSFIQSLDLTNCRITNEGGI 402

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            L + L   K  ++ L + NN+ S      +A+ ++   +L  ++L  N +  +G E + 
Sbjct: 403 ELANSLVDNKS-ISTLVLNNNTFSKDTVVALAKTLEKNSTLTSLSLVNNSLTIDGVEDLF 461

Query: 409 DALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            +L   N+T+  IDL  N + S+G   I++ +   S I+ L L  N +   GA ++   +
Sbjct: 462 KSLSTSNKTLIKIDLTNNLLGSQGGETISKYIPKCS-ISELILTNNQLETQGASSILNAV 520

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
             + +I TL +    IG+   E +  +L+ +N+I  +++  N L D     L ++   +N
Sbjct: 521 ATNSSIQTLDISNNSIGSDVVEPLCSVLKESNSILKINVSTNKLEDTVIDPLIRAIS-IN 579

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           ++L SI ++ N+        +  A++ N+ +
Sbjct: 580 QSLISIQISSNQFSKQSNNKLLYAIQQNKSI 610


>gi|320165451|gb|EFW42350.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 460

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 135/232 (58%), Gaps = 1/232 (0%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AEAL  N+T  SL L+ N  G  GA A+A+ L+ NK+L  L L+ N IG+ G +A+   
Sbjct: 40  IAEALKVNTTATSLDLSENQIGDAGALAIAEALKVNKTLFWLSLNENQIGEAGAQAIAEA 99

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L     +LA LD+G N I   GA  +AE +K  K+L  ++L  N IG  GA+ IAD LK 
Sbjct: 100 LKVNT-RLAYLDLGLNQIGVAGAQIIAEALKVNKTLSSLSLIDNQIGGAGAQAIADTLKV 158

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N T+T++ L  N I   GA AIA  LK N  ++ LDL  N IG  GA A++E LK +  +
Sbjct: 159 NETVTSLHLQENQIGDVGAHAIAEALKVNKTLSWLDLDINEIGDVGAHAIAEALKANTAV 218

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
             L L   QIG++GA+ +A+ L+ N  ++ LD+  N + + G +   ++  V
Sbjct: 219 TALHLEENQIGSTGAQEIAEALKVNTRLAFLDVHLNCIGNAGLQAFDEARHV 270



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 128/221 (57%), Gaps = 3/221 (1%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N I   GA  +AE +K  K+L W++L  N IG+ GA+ IA+ALK N  +  +DLG
Sbjct: 53  LDLSENQIGDAGALAIAEALKVNKTLFWLSLNENQIGEAGAQAIAEALKVNTRLAYLDLG 112

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I   GA  IA  LK N  ++SL L  N IG  GA+A+++ LK +  + +L L   QI
Sbjct: 113 LNQIGVAGAQIIAEALKVNKTLSSLSLIDNQIGGAGAQAIADTLKVNETVTSLHLQENQI 172

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G  GA  +A+ L+ N T+S LDL  N + D GA  +A++ K  N A+T++ L  N+I   
Sbjct: 173 GDVGAHAIAEALKVNKTLSWLDLDINEIGDVGAHAIAEALK-ANTAVTALHLEENQIGST 231

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           GA  IA+ALK N  +A   ++L  N +   G  A  +A+ +
Sbjct: 232 GAQEIAEALKVNTRLAFLDVHL--NCIGNAGLQAFDEARHV 270



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 117/199 (58%), Gaps = 5/199 (2%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +KN +  L +     +IGD  A+ IA+ALK N T T++DL  N I   GA AIA  LK N
Sbjct: 18  VKNARDYLEVRCV--EIGDTEAQIIAEALKVNTTATSLDLSENQIGDAGALAIAEALKVN 75

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  L L  N IG  GA+A++E LK +  +  L LG  QIG +GA+ +A+ L+ N T+S
Sbjct: 76  KTLFWLSLNENQIGEAGAQAIAEALKVNTRLAYLDLGLNQIGVAGAQIIAEALKVNKTLS 135

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +   GA+ +A + K VNE +TS+ L  N+I D GA AIA+ALK N+   ++ 
Sbjct: 136 SLSLIDNQIGGAGAQAIADTLK-VNETVTSLHLQENQIGDVGAHAIAEALKVNK--TLSW 192

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+L  N +   G  A+ +A
Sbjct: 193 LDLDINEIGDVGAHAIAEA 211



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 139/276 (50%), Gaps = 6/276 (2%)

Query: 150 SKQTLNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           S Q + E  +EL      A   +++     GD     +AE+L  N TA  +  + N I  
Sbjct: 3   SYQNMTERQRELYDKVKNARDYLEVRCVEIGDTEAQIIAEALKVNTTATSLDLSENQIGD 62

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG  A    L+ N  L  L+L+ N IG+ G + + + L  N  +  L L    +   GA+
Sbjct: 63  AGALAIAEALKVNKTLFWLSLNENQIGEAGAQAIAEALKVNTRLAYLDLGLNQIGVAGAQ 122

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            IAE LK N  L  L L +N I  +G  ++A+ L  N T+ SLHL  N  G +GA+A+A+
Sbjct: 123 IIAEALKVNKTLSSLSLIDNQIGGAGAQAIADTLKVNETVTSLHLQENQIGDVGAHAIAE 182

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L+ NK+L  L L  N IGD G  A+   L +     A L +  N I + GA  +AE +K
Sbjct: 183 ALKVNKTLSWLDLDINEIGDVGAHAIAEALKANTAVTA-LHLEENQIGSTGAQEIAEALK 241

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
               L ++++++N IG+ G +   +A   NR + T+
Sbjct: 242 VNTRLAFLDVHLNCIGNAGLQAFDEARHVNRILKTL 277



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 118/238 (49%), Gaps = 3/238 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           +S+D+S    GD G   +AE+L  N+T   +S   N I  AG +A    L+ N  L  L+
Sbjct: 51  TSLDLSENQIGDAGALAIAEALKVNKTLFWLSLNENQIGEAGAQAIAEALKVNTRLAYLD 110

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N IG  G + + + L  N  +  L L    +   GA+AIA+ LK N  +  L L  N
Sbjct: 111 LGLNQIGVAGAQIIAEALKVNKTLSSLSLIDNQIGGAGAQAIADTLKVNETVTSLHLQEN 170

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G  ++AEAL  N T+  L L+ N  G +GA+A+A+ L+ N ++  LHL  N IG 
Sbjct: 171 QIGDVGAHAIAEALKVNKTLSWLDLDINEIGDVGAHAIAEALKANTAVTALHLEENQIGS 230

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKG--AFHVAEYIKNCKSLLWINLYMNDIG 400
            G + +   L     +LA LD+  N I   G  AF  A ++      L I+  +N + 
Sbjct: 231 TGAQEIAEALKVNT-RLAFLDVHLNCIGNAGLQAFDEARHVNRILKTLLIDKQINPLA 287


>gi|401415564|ref|XP_003872277.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|322488501|emb|CBZ23747.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 739

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 193/368 (52%), Gaps = 17/368 (4%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N  G    + L  +L  N+    L LS   LRD GA+ IA+L+K N  L  +++ +N
Sbjct: 153 LPENGFGVCSAEALGAVLSRNSHYSVLDLSGNCLRDNGARFIAQLIKRNRTLVHIDVASN 212

Query: 285 MIDYSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLH 338
            I + G   +A ALLEN+T+ SL +      NGN+ G  GA AL + L  N+ L  L++ 
Sbjct: 213 DIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPGAEALGELLRSNEVLARLNVS 272

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G  G+  + S L  R G L  L++ +N++  +GA  +A  ++  +   W  L  N 
Sbjct: 273 SNGLGAGGVAFIGSAL-ERNGSLTRLNLSSNNLGHEGARVLASALEAARVTHW-ELQRNH 330

Query: 399 IGDEGAEKIADAL-----KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           + D+G     +AL       N  +  +DL  N +    A A+ +VL  ++ +T+L L+ N
Sbjct: 331 LDDKGGACFLNALAGAIRNGNDVVEYLDLDNNVLGEGSADAVGKVLSVSASLTTLRLSGN 390

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           P+GA G KA+S  L  + ++++L L  C I   GA  +  +L  N+T+  LD+  N ++D
Sbjct: 391 PLGA-GVKAISTGLNENHSLSSLHLSKCSIDHIGAAALGPVLCVNHTLRHLDMSNNRVKD 449

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA  LA+    VN+ LT+ +L+ N I   G   +A+A++ N    +  LNL  N + + 
Sbjct: 450 GGAVELAKGL-AVNKCLTTWNLSSNRIGHAGGVEMAKAVQKNR--TLRHLNLRRNLMLEA 506

Query: 574 GQSALTDA 581
              A++D+
Sbjct: 507 TGEAISDS 514



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 148/290 (51%), Gaps = 8/290 (2%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G + G  G   L E L  N+    ++ ++NG+ A G+      L+ N +L  LNLS N
Sbjct: 243 VNGNHIGTPGAEALGELLRSNEVLARLNVSSNGLGAGGVAFIGSALERNGSLTRLNLSSN 302

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA----KAIAELLKN-NSILRVLELNN 283
            +G EG + L   L + A V   +L    L D+G      A+A  ++N N ++  L+L+N
Sbjct: 303 NLGHEGARVLASAL-EAARVTHWELQRNHLDDKGGACFLNALAGAIRNGNDVVEYLDLDN 361

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N++      ++ + L  ++++ +L L+GN  GA G  A++ GL  N SL  LHL   SI 
Sbjct: 362 NVLGEGSADAVGKVLSVSASLTTLRLSGNPLGA-GVKAISTGLNENHSLSSLHLSKCSID 420

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             G  AL   L      L  LD+ NN +   GA  +A+ +   K L   NL  N IG  G
Sbjct: 421 HIGAAALGPVLCVNH-TLRHLDMSNNRVKDGGAVELAKGLAVNKCLTTWNLSSNRIGHAG 479

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             ++A A+++NRT+  ++L  N +      AI+   + N+ +  LD+AYN
Sbjct: 480 GVEMAKAVQKNRTLRHLNLRRNLMLEATGEAISDSFRTNNTLERLDVAYN 529


>gi|66815309|ref|XP_641671.1| hypothetical protein DDB_G0279513 [Dictyostelium discoideum AX4]
 gi|60469707|gb|EAL67695.1| hypothetical protein DDB_G0279513 [Dictyostelium discoideum AX4]
          Length = 617

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 173/338 (51%), Gaps = 39/338 (11%)

Query: 253 LSSVDLRDEGAK-----AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           L+++DLR+  +       +AE LK+N  L  L L NN +   G TS+A A+ +N +I  L
Sbjct: 105 LTTIDLRNNSSTNYVIDRLAEALKSNKTLTYLNLYNNRLMQKGGTSIANAMKKNQSITHL 164

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L  N  GA G NA+A  L+ N +L  L L  N +G                        
Sbjct: 165 DLGLNLLGANGGNAIADALKVNNTLVHLDLSSNQLG------------------------ 200

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
                 +GA  V E +K  KS+ ++ L  N + DE +  +AD L+ N     + L  N I
Sbjct: 201 -----LRGAGPVVEALKINKSIKYLILNSNQLRDECSLPLADILRSNIGFIELALNDNEI 255

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            SKG  A+A++LK + V+T L+   N +G DG  A+++VLK + NI  ++L W ++G   
Sbjct: 256 GSKGGIALAKMLKSSKVLTKLEFGKNELGDDGGLAMADVLKNNKNIKVVRLNWNKLGVKA 315

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
            + +++  + N+TI  LDL  N   DEG  CL++SFK  N+++ S+DL+       G  A
Sbjct: 316 IKALSESFKTNSTIIQLDLSFNNFGDEGLVCLSESFK-QNKSILSLDLSRVASGLVGHKA 374

Query: 548 IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
           +A +L+ N    + +L+L N  +T  G   L  AK LV
Sbjct: 375 LADSLRVNN--TIQTLDLTNCKITNEGGVEL--AKSLV 408



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 240/495 (48%), Gaps = 22/495 (4%)

Query: 98  FVSATFVLWKLVEKLLMPK--------PSRPSKPTAE----GMNWSVGAGTNLLSGFTGK 145
           FV+ T V  KL    ++P          S+P++P  E    G+     + T+    F   
Sbjct: 30  FVNYTLV-CKLWTTQILPTAWNEMTIATSQPAEPLIEYSEDGILSQFPSTTSEPYKFNKL 88

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           + R  K  ++E+  ++++ +++D+   +  +  +  LAE+L  N+T   ++   N +   
Sbjct: 89  VMRVGK--VSEYIDKIKSLTTIDLRNNSSTNYVIDRLAEALKSNKTLTYLNLYNNRLMQK 146

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G  +    ++ N ++  L+L  N +G  G   + D L  N  +  L LSS  L   GA  
Sbjct: 147 GGTSIANAMKKNQSITHLDLGLNLLGANGGNAIADALKVNNTLVHLDLSSNQLGLRGAGP 206

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + E LK N  ++ L LN+N +       LA+ L  N     L LN N  G+ G  ALAK 
Sbjct: 207 VVEALKINKSIKYLILNSNQLRDECSLPLADILRSNIGFIELALNDNEIGSKGGIALAKM 266

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ +K L +L    N +GD+G  A+   L + K  + V+ +  N +  K    ++E  K 
Sbjct: 267 LKSSKVLTKLEFGKNELGDDGGLAMADVLKNNKN-IKVVRLNWNKLGVKAIKALSESFKT 325

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             +++ ++L  N+ GDEG   ++++ KQN++I ++DL        G  A+A  L+ N+ I
Sbjct: 326 NSTIIQLDLSFNNFGDEGLVCLSESFKQNKSILSLDLSRVASGLVGHKALADSLRVNNTI 385

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            +LDL    I  +G   L++ L  + +I+TL L            +A  L  N+TI+ L 
Sbjct: 386 QTLDLTNCKITNEGGVELAKSLVDNKSISTLILNNNTFSKDTVSELAKTLESNSTITSLS 445

Query: 506 LRANGLRDEGAKCLAQSFKV-VNEALTSIDLAFNEIRDDGAFAIAQAL-KANEDVAVTSL 563
           L  N L  +G + L +S     N++L ++DL  N +  DG   IAQ L K+N    ++ L
Sbjct: 446 LVHNQLTIDGVEDLFKSLSTSTNKSLQTLDLTNNLLGSDGGNIIAQHLTKSN----LSEL 501

Query: 564 NLANNFLTKFGQSAL 578
            L NN L+  G S++
Sbjct: 502 ILTNNQLSSQGASSI 516



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 212/434 (48%), Gaps = 9/434 (2%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ +  +L ++   ++    K+ ++ + +D+     G  G   +A++L  N T   +  +
Sbjct: 136 LNLYNNRLMQKGGTSIANAMKKNQSITHLDLGLNLLGANGGNAIADALKVNNTLVHLDLS 195

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
           +N +   G       L+ N ++K L L+ N + DE    L DIL  N G   L L+  ++
Sbjct: 196 SNQLGLRGAGPVVEALKINKSIKYLILNSNQLRDECSLPLADILRSNIGFIELALNDNEI 255

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
             +G  A+A++LK++ +L  LE   N +   G  ++A+ L  N  I+ + LN N  G   
Sbjct: 256 GSKGGIALAKMLKSSKVLTKLEFGKNELGDDGGLAMADVLKNNKNIKVVRLNWNKLGVKA 315

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             AL++  + N ++ +L L  N+ GDEG+  L       K  L+ LD+   +    G   
Sbjct: 316 IKALSESFKTNSTIIQLDLSFNNFGDEGLVCLSESFKQNKSILS-LDLSRVASGLVGHKA 374

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A+ ++   ++  ++L    I +EG  ++A +L  N++I+T+ L  N       S +A+ 
Sbjct: 375 LADSLRVNNTIQTLDLTNCKITNEGGVELAKSLVDNKSISTLILNNNTFSKDTVSELAKT 434

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLR 496
           L+ NS ITSL L +N +  DG + L + L    N  + TL L    +G+ G   +A  L 
Sbjct: 435 LESNSTITSLSLVHNQLTIDGVEDLFKSLSTSTNKSLQTLDLTNNLLGSDGGNIIAQHLT 494

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            +N +S L L  N L  +GA  +       N  L ++D++ N I  D A ++  A+  ++
Sbjct: 495 KSN-LSELILTNNQLSSQGASSILNVLPQSN--LQTLDISNNSIEPDVATSLCSAISNSQ 551

Query: 557 DVAVTSLNLANNFL 570
              +  LN++ N L
Sbjct: 552 ---ILKLNISTNKL 562



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 171/356 (48%), Gaps = 8/356 (2%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L +  K  +  + ++      GD+G   +A+ L  N+  + V    N +    IKA    
Sbjct: 263 LAKMLKSSKVLTKLEFGKNELGDDGGLAMADVLKNNKNIKVVRLNWNKLGVKAIKALSES 322

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            ++N  +  L+LS N  GDEG+ CL +    N  +  L LS V     G KA+A+ L+ N
Sbjct: 323 FKTNSTIIQLDLSFNNFGDEGLVCLSESFKQNKSILSLDLSRVASGLVGHKALADSLRVN 382

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + ++ L+L N  I   G   LA++L++N +I +L LN N       + LAK LE N ++ 
Sbjct: 383 NTIQTLDLTNCKITNEGGVELAKSLVDNKSISTLILNNNTFSKDTVSELAKTLESNSTIT 442

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYI--KNCKSLL 390
            L L  N +  +G+  L   LS+   K L  LD+ NN + + G   +A+++   N   L+
Sbjct: 443 SLSLVHNQLTIDGVEDLFKSLSTSTNKSLQTLDLTNNLLGSDGGNIIAQHLTKSNLSELI 502

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
             N   N +  +GA  I + L Q+  + T+D+  N+I    A+++   +  NS I  L++
Sbjct: 503 LTN---NQLSSQGASSILNVLPQSN-LQTLDISNNSIEPDVATSLCSAIS-NSQILKLNI 557

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           + N +       L + ++ + ++ ++++   Q        +   ++ N +I   DL
Sbjct: 558 STNKLDDTVIPPLIQAIQTNQSLISIQISANQFSKESNNKLLYSIQQNKSIYYYDL 613


>gi|189502739|ref|YP_001958456.1| hypothetical protein Aasi_1436 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498180|gb|ACE06727.1| hypothetical protein Aasi_1436 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 815

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 207/396 (52%), Gaps = 27/396 (6%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+S    G +G   LA+ L   Q    V  + NGI A G   F   LQ    + T+
Sbjct: 403 IQSIDLSENEIGAQGAVKLAKYLQDTQV-HTVYLSFNGIGAQGAVEFTKNLQGT-RVHTV 460

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR--DEGAKAIAELLKN--NSILRVL 279
           +LS N IG +GV+ L   L      +  ++ +V+LR    GA+ + EL KN   + +  +
Sbjct: 461 DLSWNRIGAQGVEELIKHL------QATKVHTVNLRLNQIGAQGVEELAKNLQGTSVHTV 514

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L+ N I   G   L    L+ + + +++L+ N  GA GA  LAK L G  S+  + L G
Sbjct: 515 NLSENHIGDQGAEELFR-YLQGTRVHTVYLSSNQIGAQGAERLAKQLLGT-SVHTIDLSG 572

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK--SLLWINLYMN 397
           N IGD G       L  ++  +  +D+  N I  +GA    E+ KN +  S+  + L  N
Sbjct: 573 NHIGDRGAEGFAQHL--QRTSVHTVDLSENHIGDRGAI---EFAKNLQGTSVHTVYLNHN 627

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IG +GA ++A  L Q  ++  I+L  N I ++GA  +A+ L+   V T ++L  N IGA
Sbjct: 628 KIGAQGAIELAKHL-QGSSVQKINLSHNQIGAQGAEGLAKHLQGTQVHT-INLWANQIGA 685

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
            GA   ++ L+   N++T+ LG+ QIGA GAE +A  L+   ++  +DL +N + D+GA+
Sbjct: 686 QGAVEFAKNLQG-TNVHTVYLGYNQIGAQGAEGLAKNLQ-GTSVHTVDLTSNQIGDQGAE 743

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            LA+  +     + +++L+ N I   GA  +A++L+
Sbjct: 744 GLAKYLQ--GTQVHTVNLSSNNIGAQGAEELAKSLQ 777



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 164/316 (51%), Gaps = 13/316 (4%)

Query: 152 QTLNEFAKELRAFS--SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           Q + E AK L+  S  +V++S  + GD+G   L   L        V  ++N I A G + 
Sbjct: 497 QGVEELAKNLQGTSVHTVNLSENHIGDQGAEELFRYL-QGTRVHTVYLSSNQIGAQGAER 555

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
               L    ++ T++LSGN IGD G +     L     V  + LS   + D GA   A+ 
Sbjct: 556 LAKQLLGT-SVHTIDLSGNHIGDRGAEGFAQHL-QRTSVHTVDLSENHIGDRGAIEFAKN 613

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           L+  S+  V  LN+N I   G   LA+ L + S+++ ++L+ N  GA GA  LAK L+G 
Sbjct: 614 LQGTSVHTVY-LNHNKIGAQGAIELAKHL-QGSSVQKINLSHNQIGAQGAEGLAKHLQGT 671

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           + +  ++L  N IG +G       L      +  + +G N I A+GA  +A+ ++   S+
Sbjct: 672 Q-VHTINLWANQIGAQGAVEFAKNLQGT--NVHTVYLGYNQIGAQGAEGLAKNLQGT-SV 727

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             ++L  N IGD+GAE +A  L Q   + T++L  NNI ++GA  +A+ L+  SV T +D
Sbjct: 728 HTVDLTSNQIGDQGAEGLAKYL-QGTQVHTVNLSSNNIGAQGAEELAKSLQGTSVHT-VD 785

Query: 450 LAYNPIGADGAKALSE 465
           L +N IGAD  + L E
Sbjct: 786 LRWNDIGADIQRLLVE 801



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 125/227 (55%), Gaps = 16/227 (7%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           K+  +D+  N I A+GA  +A+Y+++ + +  + L  N IG +GA +    L+  R + T
Sbjct: 402 KIQSIDLSENEIGAQGAVKLAKYLQDTQ-VHTVYLSFNGIGAQGAVEFTKNLQGTR-VHT 459

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +DL  N I ++G   + + L+   V T ++L  N IGA G + L++ L+   +++T+ L 
Sbjct: 460 VDLSWNRIGAQGVEELIKHLQATKVHT-VNLRLNQIGAQGVEELAKNLQG-TSVHTVNLS 517

Query: 480 WCQIGASGAEFVADMLRY--NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
              IG  GAE   ++ RY     +  + L +N +  +GA+ LA+  +++  ++ +IDL+ 
Sbjct: 518 ENHIGDQGAE---ELFRYLQGTRVHTVYLSSNQIGAQGAERLAK--QLLGTSVHTIDLSG 572

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           N I D GA   AQ L   +  +V +++L+ N +   G  A+  AK+L
Sbjct: 573 NHIGDRGAEGFAQHL---QRTSVHTVDLSENHIGDRG--AIEFAKNL 614


>gi|407410494|gb|EKF32905.1| hypothetical protein MOQ_003233, partial [Trypanosoma cruzi
           marinkellei]
          Length = 774

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 204/401 (50%), Gaps = 23/401 (5%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F  ++ +N   K   L  +  G    + +  IL +N     L LS   LRDEGA +IA+L
Sbjct: 162 FMELISANCRGKFFCLKESGFGPMCAEAIAHILSNNRKYTILDLSGNRLRDEGACSIAKL 221

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALA 323
           +K N  +  + L +N I + G  +LA ALLEN+T+ SL L      NGN+    GA A+ 
Sbjct: 222 IKINRTIVHVGLRSNDIGHIGGVALARALLENNTVVSLDLGAHSGINGNHIATEGAEAIG 281

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV--LDIGNNSISAKGAFHVAE 381
             L  NK L  L+L  N +G  G+  ++ GL    G  +V  LDI  N++   G   +A 
Sbjct: 282 IMLRANKVLSHLNLSSNGLGVSGVSFIVGGLD---GNCSVKHLDISVNNLGYAGIKALAP 338

Query: 382 YIKNCKSLLWINLYMNDIGDEGA----EKIADALKQNR-TITTIDLGGNNIHSKGASAIA 436
            ++    +  ++L  N +GD G     + IA A++     +  ++L  N +  K A A+ 
Sbjct: 339 VLETT-CITHLSLQRNSMGDNGGMVLFQAIAGAIEDGEDKLEYLNLEVNELGEKTAKAMQ 397

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           RVL  ++ + +L L+YN  GA  +K + E L  +  + +L L +C+I  +    +   L 
Sbjct: 398 RVLSSSTALKTLRLSYNSFGA-ASKYIMEGLAENKYLRSLFLSFCEIREADGAAIGAALT 456

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            N+T+  LDL  N L+D G++ +A++ K  NE L S++L+ N+I D G  AIA  L +N 
Sbjct: 457 ANSTLQHLDLSNNKLKDAGSQFIAEAMK-TNEGLISLNLSCNKIGDGGGKAIALFLTSNR 515

Query: 557 DVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
              +  LNL  N ++      L D   L   M+ +++N+ F
Sbjct: 516 --TLRELNLRRNCMSNVTGELLDD--QLRVNMTLEKMNVGF 552



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 169/363 (46%), Gaps = 16/363 (4%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R ++ +D+SG    DEG   +A+ +  N+T   V   +N I   G  A    L  N  + 
Sbjct: 198 RKYTILDLSGNRLRDEGACSIAKLIKINRTIVHVGLRSNDIGHIGGVALARALLENNTVV 257

Query: 222 TLNL------SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +L+L      +GN I  EG + +  +L  N  +  L LSS  L   G   I   L  N  
Sbjct: 258 SLDLGAHSGINGNHIATEGAEAIGIMLRANKVLSHLNLSSNGLGVSGVSFIVGGLDGNCS 317

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN----GNYGGALGANALAKGLE-GNK 330
           ++ L+++ N + Y+G  +LA  +LE + I  L L     G+ GG +   A+A  +E G  
Sbjct: 318 VKHLDISVNNLGYAGIKALA-PVLETTCITHLSLQRNSMGDNGGMVLFQAIAGAIEDGED 376

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L  L+L  N +G++  +A+   LSS    L  L +  NS  A   + + E +   K L 
Sbjct: 377 KLEYLNLEVNELGEKTAKAMQRVLSSSTA-LKTLRLSYNSFGAASKY-IMEGLAENKYLR 434

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + L   +I +     I  AL  N T+  +DL  N +   G+  IA  +K N  + SL+L
Sbjct: 435 SLFLSFCEIREADGAAIGAALTANSTLQHLDLSNNKLKDAGSQFIAEAMKTNEGLISLNL 494

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGW-CQIGASGAEFVADMLRYNNTISILDLRAN 509
           + N IG  G KA++  L  +  +  L L   C    +G E + D LR N T+  +++  N
Sbjct: 495 SCNKIGDGGGKAIALFLTSNRTLRELNLRRNCMSNVTG-ELLDDQLRVNMTLEKMNVGFN 553

Query: 510 GLR 512
             R
Sbjct: 554 DFR 556



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 5/174 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A  ++ +S  +FG    + + E L  N+    +  +   I  A   A    L +N  L+ 
Sbjct: 405 ALKTLRLSYNSFGAASKYIM-EGLAENKYLRSLFLSFCEIREADGAAIGAALTANSTLQH 463

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N + D G + + + +  N G+  L LS   + D G KAIA  L +N  LR L L 
Sbjct: 464 LDLSNNKLKDAGSQFIAEAMKTNEGLISLNLSCNKIGDGGGKAIALFLTSNRTLRELNLR 523

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGN---YGGALG-ANALAKGLEGNKSL 332
            N +       L + L  N T+  +++  N   Y   +G    LA+  E NKSL
Sbjct: 524 RNCMSNVTGELLDDQLRVNMTLEKMNVGFNDFRYKSLIGHRTTLARNAEKNKSL 577


>gi|320164466|gb|EFW41365.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 675

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 134/244 (54%), Gaps = 2/244 (0%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L  N I   G  ++AEAL  N T+ +L L+GN  G   A  +A+ L+ N +L +L+L+
Sbjct: 25  LNLYQNQIGDPGAYTIAEALKVNKTLTALSLSGNQIGDAAARTIAEALKVNTTLIKLNLY 84

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IG+ G  A+   L   K  L  L +  N I   GA  +AE +K   +L  +NL  N 
Sbjct: 85  QNQIGNAGATAIAEALKVNK-TLTTLSLSGNQIGNVGAQVMAEVLK-VNTLTELNLRQNQ 142

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IG+ GA  IA+ALK N  +T +DL  N I   GA AIA   K N+ +T+L L  N IG  
Sbjct: 143 IGNAGATAIAEALKVNTRLTGLDLWENQIGDDGALAIAEAFKVNTTLTTLSLHQNQIGDA 202

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA+A++E LK +  +  L L   QIG +GA+ +A+ L+ N T+  L L  N L + G   
Sbjct: 203 GAQAIAEALKVNKTLKELFLWRNQIGDAGAQAIAEALKVNKTLKTLFLNENFLTNTGINA 262

Query: 519 LAQS 522
           L Q+
Sbjct: 263 LRQT 266



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 132/244 (54%), Gaps = 2/244 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL  N IGD G   + + L  N  +  L LS   + D  A+ IAE LK N+ L  L L 
Sbjct: 25  LNLYQNQIGDPGAYTIAEALKVNKTLTALSLSGNQIGDAAARTIAEALKVNTTLIKLNLY 84

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G T++AEAL  N T+ +L L+GN  G +GA  +A+ L+ N +L EL+L  N I
Sbjct: 85  QNQIGNAGATAIAEALKVNKTLTTLSLSGNQIGNVGAQVMAEVLKVN-TLTELNLRQNQI 143

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           G+ G  A+   L     +L  LD+  N I   GA  +AE  K   +L  ++L+ N IGD 
Sbjct: 144 GNAGATAIAEALKVNT-RLTGLDLWENQIGDDGALAIAEAFKVNTTLTTLSLHQNQIGDA 202

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N+T+  + L  N I   GA AIA  LK N  + +L L  N +   G  A
Sbjct: 203 GAQAIAEALKVNKTLKELFLWRNQIGDAGAQAIAEALKVNKTLKTLFLNENFLTNTGINA 262

Query: 463 LSEV 466
           L + 
Sbjct: 263 LRQT 266



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 148/312 (47%), Gaps = 35/312 (11%)

Query: 152 QTLNEFAKELR-----AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
           Q +N+  ++L      A   +++     GD G + +AE+L  N+T   +S + N I  A 
Sbjct: 5   QNMNQRQRKLYDQVKDASGELNLYQNQIGDPGAYTIAEALKVNKTLTALSLSGNQIGDAA 64

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            +     L+ N  L  LNL  N IG+ G   + + L  N  +  L LS   + + GA+ +
Sbjct: 65  ARTIAEALKVNTTLIKLNLYQNQIGNAGATAIAEALKVNKTLTTLSLSGNQIGNVGAQVM 124

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE+LK N+ L  L L  N I  +G T++AEAL  N+ +  L L  N  G  GA A+A+  
Sbjct: 125 AEVLKVNT-LTELNLRQNQIGNAGATAIAEALKVNTRLTGLDLWENQIGDDGALAIAEAF 183

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           + N +L  L LH N IGD G +A                             +AE +K  
Sbjct: 184 KVNTTLTTLSLHQNQIGDAGAQA-----------------------------IAEALKVN 214

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           K+L  + L+ N IGD GA+ IA+ALK N+T+ T+ L  N + + G +A+ +         
Sbjct: 215 KTLKELFLWRNQIGDAGAQAIAEALKVNKTLKTLFLNENFLTNTGINALRQTGNTTCNFK 274

Query: 447 SLDLAYNPIGAD 458
            LD    P  A+
Sbjct: 275 DLDQQRVPSSAE 286


>gi|320165994|gb|EFW42893.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 434

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 121/188 (64%), Gaps = 3/188 (1%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K   +L  ++L  N IG+ GA+ IA+ALK N+T+T++ LG N     GA AIA  LK N
Sbjct: 45  LKVNTTLTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVN 104

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +T L+L++N +G D AKA +E LK +  +  LKL   QIG +GA  +A+ L+ N T++
Sbjct: 105 TTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVT 164

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N + D GA+ +A++ K  N+ LT++DL+ N+I D GA AI +A+K      +T+
Sbjct: 165 ELALDGNQIGDVGAQAIAEALK-TNKTLTALDLSLNQIGDAGAQAITEAIKVG--TTLTT 221

Query: 563 LNLANNFL 570
           L+L+NN +
Sbjct: 222 LDLSNNCI 229



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 1/195 (0%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  LD+  N I   GA  +AE +K+ K+L  ++L  N  GD GA+ IA+ALK N T+T +
Sbjct: 51  LTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVNTTLTKL 110

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           +L  N +    A A A  LK N  +T L L    IG  GA+A++E LK +  +  L L  
Sbjct: 111 NLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVTELALDG 170

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            QIG  GA+ +A+ L+ N T++ LDL  N + D GA+ + ++ K V   LT++DL+ N I
Sbjct: 171 NQIGDVGAQAIAEALKTNKTLTALDLSLNQIGDAGAQAITEAIK-VGTTLTTLDLSNNCI 229

Query: 541 RDDGAFAIAQALKAN 555
               A  I +A K N
Sbjct: 230 DSAVAQLIIEANKLN 244



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 116/242 (47%), Gaps = 29/242 (11%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L  L+LS N IG+ G + + + L  N  +  L L      D GA+AIAE LK N
Sbjct: 45  LKVNTTLTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVN 104

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L  L L+ N +      + AEAL  N T+  L L+    G  GA A+A+ L+ NK++ 
Sbjct: 105 TTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVT 164

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L GN IGD G +A                             +AE +K  K+L  ++
Sbjct: 165 ELALDGNQIGDVGAQA-----------------------------IAEALKTNKTLTALD 195

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L +N IGD GA+ I +A+K   T+TT+DL  N I S  A  I    K N         +N
Sbjct: 196 LSLNQIGDAGAQAITEAIKVGTTLTTLDLSNNCIDSAVAQLIIEANKLNIADVYTYGQFN 255

Query: 454 PI 455
           P+
Sbjct: 256 PL 257



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 110/213 (51%), Gaps = 1/213 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GD     +A +L  N T  ++  + N I   G +A    L+SN  L +L+L  N
Sbjct: 28  LSDDEIGDAEAQAIAAALKVNTTLTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKN 87

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
             GD G + + + L  N  + +L LS   + D+ AKA AE LK N  L  L+L+   I  
Sbjct: 88  QTGDAGAQAIAEALKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGD 147

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++AEAL  N T+  L L+GN  G +GA A+A+ L+ NK+L  L L  N IGD G +
Sbjct: 148 AGARAIAEALKVNKTVTELALDGNQIGDVGAQAIAEALKTNKTLTALDLSLNQIGDAGAQ 207

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           A+   +      L  LD+ NN I +  A  + E
Sbjct: 208 AITEAIKV-GTTLTTLDLSNNCIDSAVAQLIIE 239



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 93/179 (51%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+S    G+ G   +AE+L  N+T   +S   N    AG +A    L+ N  L  L
Sbjct: 51  LTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVNTTLTKL 110

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLS N +GD+  K   + L  N  + RL+L  V + D GA+AIAE LK N  +  L L+ 
Sbjct: 111 NLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVTELALDG 170

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           N I   G  ++AEAL  N T+ +L L+ N  G  GA A+ + ++   +L  L L  N I
Sbjct: 171 NQIGDVGAQAIAEALKTNKTLTALDLSLNQIGDAGAQAITEAIKVGTTLTTLDLSNNCI 229



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 80/161 (49%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K  +  +S+ +     GD G   +AE+L  N T  +++ + N +     KAF 
Sbjct: 67  QAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVNTTLTKLNLSWNQVGDDAAKAFA 126

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L L    IGD G + + + L  N  V  L L    + D GA+AIAE LK
Sbjct: 127 EALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVTELALDGNQIGDVGAQAIAEALK 186

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N  L  L+L+ N I  +G  ++ EA+   +T+ +L L+ N
Sbjct: 187 TNKTLTALDLSLNQIGDAGAQAITEAIKVGTTLTTLDLSNN 227



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 35/147 (23%)

Query: 157 FAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           FA+ L+     + + +     GD G   +AE+L  N+T  E++   N I   G +A    
Sbjct: 125 FAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVTELALDGNQIGDVGAQAIAEA 184

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L  L+LS N IG                            D GA+AI E +K  
Sbjct: 185 LKTNKTLTALDLSLNQIG----------------------------DAGAQAITEAIKVG 216

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLE 300
           + L  L+L+NN ID    +++A+ ++E
Sbjct: 217 TTLTTLDLSNNCID----SAVAQLIIE 239


>gi|320165055|gb|EFW41954.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 426

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/218 (41%), Positives = 129/218 (59%), Gaps = 3/218 (1%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+ +N I    A  +AE +K   +L+ I+L  N IGD GA+ IA+AL+ N T+  + L 
Sbjct: 25  LDLDDNQIGVAEAQAIAEALKVNTTLIKISLQENQIGDAGAQAIAEALRANTTLKELLLH 84

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I   GA AIA  LK N+ +T L L  N IG  GA+A++E LK +  ++ + L   QI
Sbjct: 85  LNQIGDAGAQAIAEALKVNNTLTDLYLDENQIGDGGAQAIAEALKANATLSYVHLKHNQI 144

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G  GA  +A+ LR N+T+++L LR N + D GA  +A++ K VN+ L  I L  N+I D 
Sbjct: 145 GDGGAWAIAEALRVNSTVTVLSLRHNQIGDGGAWAIAEALK-VNKTLIRISLDGNQIGDA 203

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           GA AIA+ALK N    +T L L+ N    FG  A+ +A
Sbjct: 204 GAQAIAEALKVN--TTLTLLFLSRNCFGVFGSQAIDEA 239



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 1/221 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  N IG    + + + L  N  + ++ L    + D GA+AIAE L+ N+ L+ L L+
Sbjct: 25  LDLDDNQIGVAEAQAIAEALKVNTTLIKISLQENQIGDAGAQAIAEALRANTTLKELLLH 84

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  ++AEAL  N+T+  L+L+ N  G  GA A+A+ L+ N +L  +HL  N I
Sbjct: 85  LNQIGDAGAQAIAEALKVNNTLTDLYLDENQIGDGGAQAIAEALKANATLSYVHLKHNQI 144

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G  A+   L      + VL + +N I   GA+ +AE +K  K+L+ I+L  N IGD 
Sbjct: 145 GDGGAWAIAEALRV-NSTVTVLSLRHNQIGDGGAWAIAEALKVNKTLIRISLDGNQIGDA 203

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           GA+ IA+ALK N T+T + L  N     G+ AI    K  S
Sbjct: 204 GAQAIAEALKVNTTLTLLFLSRNCFGVFGSQAIDEACKGKS 244



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 134/271 (49%), Gaps = 32/271 (11%)

Query: 285 MIDYSGFTSLAEALLENSTIRS--LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           M+ Y   T     L +     S  L L+ N  G   A A+A+ L+ N +L ++ L  N I
Sbjct: 1   MLSYESMTERQRELYDQVKKASGQLDLDDNQIGVAEAQAIAEALKVNTTLIKISLQENQI 60

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A                             +AE ++   +L  + L++N IGD 
Sbjct: 61  GDAGAQA-----------------------------IAEALRANTTLKELLLHLNQIGDA 91

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N T+T + L  N I   GA AIA  LK N+ ++ + L +N IG  GA A
Sbjct: 92  GAQAIAEALKVNNTLTDLYLDENQIGDGGAQAIAEALKANATLSYVHLKHNQIGDGGAWA 151

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           ++E L+ +  +  L L   QIG  GA  +A+ L+ N T+  + L  N + D GA+ +A++
Sbjct: 152 IAEALRVNSTVTVLSLRHNQIGDGGAWAIAEALKVNKTLIRISLDGNQIGDAGAQAIAEA 211

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            K VN  LT + L+ N     G+ AI +A K
Sbjct: 212 LK-VNTTLTLLFLSRNCFGVFGSQAIDEACK 241



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 124/254 (48%), Gaps = 9/254 (3%)

Query: 150 SKQTLNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           S +++ E  +EL     +A   +D+     G      +AE+L  N T  ++S   N I  
Sbjct: 3   SYESMTERQRELYDQVKKASGQLDLDDNQIGVAEAQAIAEALKVNTTLIKISLQENQIGD 62

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG +A    L++N  LK L L  N IGD G + + + L  N  +  L L    + D GA+
Sbjct: 63  AGAQAIAEALRANTTLKELLLHLNQIGDAGAQAIAEALKVNNTLTDLYLDENQIGDGGAQ 122

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE LK N+ L  + L +N I   G  ++AEAL  NST+  L L  N  G  GA A+A+
Sbjct: 123 AIAEALKANATLSYVHLKHNQIGDGGAWAIAEALRVNSTVTVLSLRHNQIGDGGAWAIAE 182

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L+ NK+L  + L GN IGD G +A+   L      L +L +  N     G+  + E   
Sbjct: 183 ALKVNKTLIRISLDGNQIGDAGAQAIAEALKVNT-TLTLLFLSRNCFGVFGSQAIDEA-- 239

Query: 385 NCKSLLWINLYMND 398
            CK      L++ D
Sbjct: 240 -CKGKSGFQLFLRD 252


>gi|320168986|gb|EFW45885.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 281

 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/233 (37%), Positives = 137/233 (58%), Gaps = 7/233 (3%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A GL+ N +L  L+ + +++GD G +A+   L      L  L++  N+I   GA  +AE 
Sbjct: 36  ANGLKENCTLLMLNFYRSAVGDVGAQAIADALKVNS-TLTWLNLSENNIGDLGAQALAEA 94

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K   +L  ++L  N+IG +GA+ +ADALK N+T+T + L  N I + GA AIA  LK N
Sbjct: 95  LKVNTALTTLHLGRNNIGPQGAQALADALKLNKTLTALHLDSNRIETAGAQAIADALKVN 154

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +T +DL  N IGA   +AL+EVLK +  + T+ L   +IG +GAE +AD L+ N T++
Sbjct: 155 QSLTEIDLQSNRIGAGAGQALAEVLKVNQALATINLNINKIGEAGAEAIADALKVNRTVT 214

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            L L +N +   G +  A + K      T +D++ N+I DD   +IA AL++N
Sbjct: 215 TLHLWSNEITQPGTRAFAAALK------TKLDVSGNQIDDDTRQSIAAALQSN 261



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/224 (38%), Positives = 134/224 (59%), Gaps = 3/224 (1%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I  K A   A  +K   +LL +N Y + +GD GA+ IADALK N T+T ++L  NNI   
Sbjct: 27  IGPKRAQDAANGLKENCTLLMLNFYRSAVGDVGAQAIADALKVNSTLTWLNLSENNIGDL 86

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA A+A  LK N+ +T+L L  N IG  GA+AL++ LK +  +  L L   +I  +GA+ 
Sbjct: 87  GAQALAEALKVNTALTTLHLGRNNIGPQGAQALADALKLNKTLTALHLDSNRIETAGAQA 146

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           +AD L+ N +++ +DL++N +     + LA+  KV N+AL +I+L  N+I + GA AIA 
Sbjct: 147 IADALKVNQSLTEIDLQSNRIGAGAGQALAEVLKV-NQALATINLNINKIGEAGAEAIAD 205

Query: 551 ALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVN 594
           ALK N    VT+L+L +N +T+ G  A   A     ++S  +++
Sbjct: 206 ALKVNR--TVTTLHLWSNEITQPGTRAFAAALKTKLDVSGNQID 247



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 129/232 (55%), Gaps = 9/232 (3%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+AIA+ LK NS L  L L+ N I   G  +LAEAL  N+ + +LHL  N  G  GA
Sbjct: 57  DVGAQAIADALKVNSTLTWLNLSENNIGDLGAQALAEALKVNTALTTLHLGRNNIGPQGA 116

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            ALA  L+ NK+L  LHL  N I   G +A+   L   +  L  +D+ +N I A     +
Sbjct: 117 QALADALKLNKTLTALHLDSNRIETAGAQAIADALKVNQ-SLTEIDLQSNRIGAGAGQAL 175

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE +K  ++L  INL +N IG+ GAE IADALK NRT+TT+ L  N I   G  A A  L
Sbjct: 176 AEVLKVNQALATINLNINKIGEAGAEAIADALKVNRTVTTLHLWSNEITQPGTRAFAAAL 235

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           K     T LD++ N I  D  ++++  L+ +G+    +   C +  + A++V
Sbjct: 236 K-----TKLDVSGNQIDDDTRQSIAAALQSNGSKREFQ---CHVTLNEADWV 279



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 101/198 (51%), Gaps = 6/198 (3%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +A++L  N T   ++ + N I   G +A    L+ N AL TL+L  N IG +
Sbjct: 55  VGDVGAQAIADALKVNSTLTWLNLSENNIGDLGAQALAEALKVNTALTTLHLGRNNIGPQ 114

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + L D L  N  +  L L S  +   GA+AIA+ LK N  L  ++L +N I      +
Sbjct: 115 GAQALADALKLNKTLTALHLDSNRIETAGAQAIADALKVNQSLTEIDLQSNRIGAGAGQA 174

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LAE L  N  + +++LN N  G  GA A+A  L+ N+++  LHL  N I   G RA  + 
Sbjct: 175 LAEVLKVNQALATINLNINKIGEAGAEAIADALKVNRTVTTLHLWSNEITQPGTRAFAAA 234

Query: 354 LSSRKGKLAVLDIGNNSI 371
           L ++      LD+  N I
Sbjct: 235 LKTK------LDVSGNQI 246



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 120/260 (46%), Gaps = 34/260 (13%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           A  L  N T   ++F  + +   G +A    L+ N  L  LNLS N IG           
Sbjct: 36  ANGLKENCTLLMLNFYRSAVGDVGAQAIADALKVNSTLTWLNLSENNIG----------- 84

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
                            D GA+A+AE LK N+ L  L L  N I   G  +LA+AL  N 
Sbjct: 85  -----------------DLGAQALAEALKVNTALTTLHLGRNNIGPQGAQALADALKLNK 127

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           T+ +LHL+ N     GA A+A  L+ N+SL E+ L  N IG    +AL   L   +  LA
Sbjct: 128 TLTALHLDSNRIETAGAQAIADALKVNQSLTEIDLQSNRIGAGAGQALAEVLKVNQA-LA 186

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            +++  N I   GA  +A+ +K  +++  ++L+ N+I   G    A ALK     T +D+
Sbjct: 187 TINLNINKIGEAGAEAIADALKVNRTVTTLHLWSNEITQPGTRAFAAALK-----TKLDV 241

Query: 423 GGNNIHSKGASAIARVLKDN 442
            GN I      +IA  L+ N
Sbjct: 242 SGNQIDDDTRQSIAAALQSN 261



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 5/197 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +++S  N GD G   LAE+L  N     +    N I   G +A    L+ N  L  L
Sbjct: 73  LTWLNLSENNIGDLGAQALAEALKVNTALTTLHLGRNNIGPQGAQALADALKLNKTLTAL 132

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N I   G + + D L  N  +  + L S  +     +A+AE+LK N  L  + LN 
Sbjct: 133 HLDSNRIETAGAQAIADALKVNQSLTEIDLQSNRIGAGAGQALAEVLKVNQALATINLNI 192

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  ++A+AL  N T+ +LHL  N     G  A A  L+      +L + GN I 
Sbjct: 193 NKIGEAGAEAIADALKVNRTVTTLHLWSNEITQPGTRAFAAALK-----TKLDVSGNQID 247

Query: 344 DEGIRALMSGLSSRKGK 360
           D+  +++ + L S   K
Sbjct: 248 DDTRQSIAAALQSNGSK 264



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 5/160 (3%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           +  Q L +  K  +  +++ +        G   +A++L  NQ+  E+   +N I A   +
Sbjct: 114 QGAQALADALKLNKTLTALHLDSNRIETAGAQAIADALKVNQSLTEIDLQSNRIGAGAGQ 173

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   VL+ N AL T+NL+ N IG+ G + + D L  N  V  L L S ++   G +A A 
Sbjct: 174 ALAEVLKVNQALATINLNINKIGEAGAEAIADALKVNRTVTTLHLWSNEITQPGTRAFAA 233

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
            LK       L+++ N ID     S+A AL  N + R   
Sbjct: 234 ALKTK-----LDVSGNQIDDDTRQSIAAALQSNGSKREFQ 268


>gi|300691655|ref|YP_003752650.1| type III effector protein [Ralstonia solanacearum PSI07]
 gi|299078715|emb|CBJ51374.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
           solanacearum PSI07]
          Length = 608

 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 142/418 (33%), Positives = 207/418 (49%), Gaps = 72/418 (17%)

Query: 156 EFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E A+ L A    +S+ + G   GD      AE+L  +Q+ + +  +AN I   G +A  G
Sbjct: 202 EGAQRLAASTSLASLSLIGCEIGDRA----AEALAASQSIKSLDLSANRIGRDGARALAG 257

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
                  L +LNL  N IGDEG + L         +  L LSS  + D GA A+A+    
Sbjct: 258 A-----PLVSLNLYSNAIGDEGARALATSRT----LTSLNLSSNGIDDAGAGALAD---- 304

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N++L  L L  N I   G    A+AL  ++++  L L  N  G  GA ALA    G+KSL
Sbjct: 305 NTLLTQLNLQGNRIGRGG----AQALANSTSLTDLDLGNNRLGDRGARALA----GSKSL 356

Query: 333 RELHLHGNSIGDEGIRAL-----------------MSGLSSRKGK--LAVLDIGNNSISA 373
             L + GN IGD+G +AL                 + G+ +  G   L+VLD+    I +
Sbjct: 357 TSLSVRGNEIGDKGAKALARNATLKSLNLSYNLISLRGVRALGGSATLSVLDLCACDIDS 416

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            GA  +A       SL  + L  N IGD GA     AL +N T+T + L GN IH+ GA 
Sbjct: 417 SGASALARN----ASLASLYLGSNRIGDRGAR----ALAKNSTLTRLALSGNGIHTTGAQ 468

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           A+A     N  + SLDL  N I  DGA AL+     H  + +L L   +I ++GA+ +A 
Sbjct: 469 ALA----GNDSLISLDLGGNEIDDDGAAALAR----HPRLISLDLRGNRIRSAGAQQLA- 519

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
               + T++ LDL AN +  EGA+ L++S       LT+++++ N I D GA A+A++
Sbjct: 520 ---KSATLAELDLSANRIGAEGAEALSRST-----VLTTLNVSDNAIGDAGALALAKS 569



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 151/309 (48%), Gaps = 41/309 (13%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + +D+     GD G    A +L  +++   +S   N I   G KA    L  N  LK+
Sbjct: 331 SLTDLDLGNNRLGDRG----ARALAGSKSLTSLSVRGNEIGDKGAKA----LARNATLKS 382

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNLS N I   GV+ L      +A +  L L + D+   GA A+A     N+ L  L L 
Sbjct: 383 LNLSYNLISLRGVRALGG----SATLSVLDLCACDIDSSGASALAR----NASLASLYLG 434

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G    A AL +NST+  L L+GN     GA ALA    GN SL  L L GN I
Sbjct: 435 SNRIGDRG----ARALAKNSTLTRLALSGNGIHTTGAQALA----GNDSLISLDLGGNEI 486

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            D+G  AL     +R  +L  LD+  N I + GA  +A+      +L  ++L  N IG E
Sbjct: 487 DDDGAAAL-----ARHPRLISLDLRGNRIRSAGAQQLAK----SATLAELDLSANRIGAE 537

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GAE    AL ++  +TT+++  N I   GA A+A   K  S+I SLD   + IG  GA+A
Sbjct: 538 GAE----ALSRSTVLTTLNVSDNAIGDAGALALA---KSTSLI-SLDARRSGIGEVGARA 589

Query: 463 LSEVLKFHG 471
           L    +  G
Sbjct: 590 LEANTRLTG 598



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 20/126 (15%)

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG +GA+ L+          +L L  C+IG   AE +A     + +I  LDL AN +  +
Sbjct: 199 IGVEGAQRLAASTSLA----SLSLIGCEIGDRAAEALA----ASQSIKSLDLSANRIGRD 250

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           GA+ LA +       L S++L  N I D+GA A+A +        +TSLNL++N +   G
Sbjct: 251 GARALAGA------PLVSLNLYSNAIGDEGARALATSRT------LTSLNLSSNGIDDAG 298

Query: 575 QSALTD 580
             AL D
Sbjct: 299 AGALAD 304


>gi|320167613|gb|EFW44512.1| hypothetical protein CAOG_02537 [Capsaspora owczarzaki ATCC 30864]
          Length = 302

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/247 (38%), Positives = 142/247 (57%), Gaps = 2/247 (0%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D  A+AIA+  K N  + VL L+NN I  +G  +LAEAL  N T+  L+L+ N+ G  GA
Sbjct: 34  DAEAQAIAQAFKVNVTVTVLMLDNNRIGSAGAQALAEALKVNKTLTGLYLSDNHIGDAGA 93

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+A+ L+ NK L  L+L  N IGD G +A+ + L      L +L +G N I + GA  +
Sbjct: 94  LAIAEALKVNKRLTSLNLVENQIGDAGGQAIANALKVNT-TLEMLYLGRNPIGSTGAQAI 152

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A+ +K   +L  +  + N IGD GA+ IADAL+ N T+TT+ L  N   + GA+AIA  L
Sbjct: 153 ADSLKVNNTLTELYFFRNQIGDAGAQAIADALEVNSTLTTLILEKNQFGNAGATAIAEAL 212

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK-LGWCQIGASGAEFVADMLRYN 498
           + N+ +T L+L+ N I   GA+ ++E    +  + TLK +  C I  + + F  ++  Y 
Sbjct: 213 RVNTTLTELNLSQNAIADAGAQMIAEAFNINKTLTTLKYVDSCCIVPNVSAFSPELENYV 272

Query: 499 NTISILD 505
             IS L+
Sbjct: 273 TEISSLE 279



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 130/241 (53%), Gaps = 30/241 (12%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++A+A   N T+  L L+ N  G+ GA ALA+ L+ NK+L  L+L  N IGD        
Sbjct: 39  AIAQAFKVNVTVTVLMLDNNRIGSAGAQALAEALKVNKTLTGLYLSDNHIGD-------- 90

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
                                 GA  +AE +K  K L  +NL  N IGD G + IA+ALK
Sbjct: 91  ---------------------AGALAIAEALKVNKRLTSLNLVENQIGDAGGQAIANALK 129

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+  + LG N I S GA AIA  LK N+ +T L    N IG  GA+A+++ L+ +  
Sbjct: 130 VNTTLEMLYLGRNPIGSTGAQAIADSLKVNNTLTELYFFRNQIGDAGAQAIADALEVNST 189

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           + TL L   Q G +GA  +A+ LR N T++ L+L  N + D GA+ +A++F  +N+ LT+
Sbjct: 190 LTTLILEKNQFGNAGATAIAEALRVNTTLTELNLSQNAIADAGAQMIAEAFN-INKTLTT 248

Query: 533 I 533
           +
Sbjct: 249 L 249



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 123/217 (56%), Gaps = 3/217 (1%)

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+    I    A  +A+  K   ++  + L  N IG  GA+ +A+ALK N+T+T + L  
Sbjct: 26  DLCGKQIGDAEAQAIAQAFKVNVTVTVLMLDNNRIGSAGAQALAEALKVNKTLTGLYLSD 85

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N+I   GA AIA  LK N  +TSL+L  N IG  G +A++  LK +  +  L LG   IG
Sbjct: 86  NHIGDAGALAIAEALKVNKRLTSLNLVENQIGDAGGQAIANALKVNTTLEMLYLGRNPIG 145

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
           ++GA+ +AD L+ NNT++ L    N + D GA+ +A + + VN  LT++ L  N+  + G
Sbjct: 146 STGAQAIADSLKVNNTLTELYFFRNQIGDAGAQAIADALE-VNSTLTTLILEKNQFGNAG 204

Query: 545 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           A AIA+AL+ N    +T LNL+ N +   G   + +A
Sbjct: 205 ATAIAEALRVN--TTLTELNLSQNAIADAGAQMIAEA 239



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 106/191 (55%), Gaps = 3/191 (1%)

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           W +L    IGD  A+ IA A K N T+T + L  N I S GA A+A  LK N  +T L L
Sbjct: 24  WHDLCGKQIGDAEAQAIAQAFKVNVTVTVLMLDNNRIGSAGAQALAEALKVNKTLTGLYL 83

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           + N IG  GA A++E LK +  + +L L   QIG +G + +A+ L+ N T+ +L L  N 
Sbjct: 84  SDNHIGDAGALAIAEALKVNKRLTSLNLVENQIGDAGGQAIANALKVNTTLEMLYLGRNP 143

Query: 511 LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           +   GA+ +A S K VN  LT +    N+I D GA AIA AL+ N    +T+L L  N  
Sbjct: 144 IGSTGAQAIADSLK-VNNTLTELYFFRNQIGDAGAQAIADALEVNS--TLTTLILEKNQF 200

Query: 571 TKFGQSALTDA 581
              G +A+ +A
Sbjct: 201 GNAGATAIAEA 211



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 147/333 (44%), Gaps = 38/333 (11%)

Query: 150 SKQTLNEFAKELRAFSSV-----DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           S Q + E  +EL    ++     D+ G+  GD     +A++   N T   +    N I +
Sbjct: 3   SYQRMTERQRELHDKVNIAGGWHDLCGKQIGDAEAQAIAQAFKVNVTVTVLMLDNNRIGS 62

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG +A    L+ N  L  L LS N IG                            D GA 
Sbjct: 63  AGAQALAEALKVNKTLTGLYLSDNHIG----------------------------DAGAL 94

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE LK N  L  L L  N I  +G  ++A AL  N+T+  L+L  N  G+ GA A+A 
Sbjct: 95  AIAEALKVNKRLTSLNLVENQIGDAGGQAIANALKVNTTLEMLYLGRNPIGSTGAQAIAD 154

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L+ N +L EL+   N IGD G +A+   L      L  L +  N     GA  +AE ++
Sbjct: 155 SLKVNNTLTELYFFRNQIGDAGAQAIADALEV-NSTLTTLILEKNQFGNAGATAIAEALR 213

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
              +L  +NL  N I D GA+ IA+A   N+T+TT+    +       SA +  L +N V
Sbjct: 214 VNTTLTELNLSQNAIADAGAQMIAEAFNINKTLTTLKYVDSCCIVPNVSAFSPEL-ENYV 272

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
                L  N I A   KAL+   KF     TL+
Sbjct: 273 TEISSLEDNIISAREYKALN---KFSNKKRTLR 302


>gi|146093389|ref|XP_001466806.1| ribonuclease inhibitor-like protein [Leishmania infantum JPCM5]
 gi|134071169|emb|CAM69855.1| ribonuclease inhibitor-like protein [Leishmania infantum JPCM5]
          Length = 736

 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 191/368 (51%), Gaps = 17/368 (4%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N  G    + L  +L  N+    L LS   LRD+GA+ IA+L+K N  L  +++ +N
Sbjct: 150 LPENGFGVCSAEALAAVLSRNSHYSVLDLSGNCLRDDGARFIAQLIKRNRTLVHIDVASN 209

Query: 285 MIDYSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLH 338
            I + G   +A ALLEN+T+ SL +      NGN+ G  GA A+ + L  N+ L  L++ 
Sbjct: 210 DIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPGAEAIGEVLRCNEVLARLNVS 269

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G  G+  + S L  R G L  L++ +N++  +GA  +A  ++      W  L  N 
Sbjct: 270 SNGLGAGGVAFIASAL-ERNGSLTRLNLSSNNLGLEGARVLASALEAAHVTHW-ELQRNH 327

Query: 399 IGDEGAEKIADAL-----KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           + D+G     +AL       +  +  +DL  N +    A A  +VL  ++ +T+L L  N
Sbjct: 328 LDDKGGACFLNALAGAIRNGHDVVEYLDLDNNALGEGCADAAGKVLAVSASLTTLRLCGN 387

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           P+GA G KA+S  L  + ++N+L L  C I   GA  +  +L  N+T+  LD+  N ++D
Sbjct: 388 PLGA-GVKAISTGLNENHSLNSLYLSKCSIDHIGAAALGAVLCVNHTLRHLDMSNNRVKD 446

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA  LA+    VN+ LT+ +L+ N I   G   +A+A++ N    +  LNL  N + + 
Sbjct: 447 GGAVELAKGL-AVNKCLTTWNLSSNRIGHAGGLEMAKAVQKNR--TLRHLNLRRNLMLEA 503

Query: 574 GQSALTDA 581
              A++D+
Sbjct: 504 TGEAISDS 511



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 182/393 (46%), Gaps = 39/393 (9%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           NG      +A   VL  N     L+LSGN + D+G + +  ++  N  +  + ++S D+ 
Sbjct: 153 NGFGVCSAEALAAVLSRNSHYSVLDLSGNCLRDDGARFIAQLIKRNRTLVHIDVASNDIG 212

Query: 260 DEGAKAIAE-LLKNNSILRV-----LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
             G   IA  LL+NN+++ +       +N N I   G  ++ E L  N  +  L+++ N 
Sbjct: 213 HVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPGAEAIGEVLRCNEVLARLNVSSNG 272

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS----------------- 356
            GA G   +A  LE N SL  L+L  N++G EG R L S L +                 
Sbjct: 273 LGAGGVAFIASALERNGSLTRLNLSSNNLGLEGARVLASALEAAHVTHWELQRNHLDDKG 332

Query: 357 ------------RKGKLAV--LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
                       R G   V  LD+ NN++    A    + +    SL  + L  N +G  
Sbjct: 333 GACFLNALAGAIRNGHDVVEYLDLDNNALGEGCADAAGKVLAVSASLTTLRLCGNPLG-A 391

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           G + I+  L +N ++ ++ L   +I   GA+A+  VL  N  +  LD++ N +   GA  
Sbjct: 392 GVKAISTGLNENHSLNSLYLSKCSIDHIGAAALGAVLCVNHTLRHLDMSNNRVKDGGAVE 451

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           L++ L  +  + T  L   +IG +G   +A  ++ N T+  L+LR N + +   + ++ S
Sbjct: 452 LAKGLAVNKCLTTWNLSSNRIGHAGGLEMAKAVQKNRTLRHLNLRRNLMLEATGEAISDS 511

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           F+  N  L  +D+A+N+     A +I +AL+ N
Sbjct: 512 FR-SNNTLERLDVAYNDFSYACAMSIERALERN 543



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 151/305 (49%), Gaps = 8/305 (2%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G + G  G   + E L  N+    ++ ++NG+ A G+      L+ N +L  LNLS N
Sbjct: 240 VNGNHIGTPGAEAIGEVLRCNEVLARLNVSSNGLGAGGVAFIASALERNGSLTRLNLSSN 299

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA----KAIAELLKN-NSILRVLELNN 283
            +G EG + L   L + A V   +L    L D+G      A+A  ++N + ++  L+L+N
Sbjct: 300 NLGLEGARVLASAL-EAAHVTHWELQRNHLDDKGGACFLNALAGAIRNGHDVVEYLDLDN 358

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +      +  + L  ++++ +L L GN  GA G  A++ GL  N SL  L+L   SI 
Sbjct: 359 NALGEGCADAAGKVLAVSASLTTLRLCGNPLGA-GVKAISTGLNENHSLNSLYLSKCSID 417

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             G  AL + L      L  LD+ NN +   GA  +A+ +   K L   NL  N IG  G
Sbjct: 418 HIGAAALGAVLCVNH-TLRHLDMSNNRVKDGGAVELAKGLAVNKCLTTWNLSSNRIGHAG 476

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             ++A A+++NRT+  ++L  N +      AI+   + N+ +  LD+AYN      A ++
Sbjct: 477 GLEMAKAVQKNRTLRHLNLRRNLMLEATGEAISDSFRSNNTLERLDVAYNDFSYACAMSI 536

Query: 464 SEVLK 468
              L+
Sbjct: 537 ERALE 541


>gi|326433982|gb|EGD79552.1| hypothetical protein PTSG_12997 [Salpingoeca sp. ATCC 50818]
          Length = 2282

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/221 (40%), Positives = 130/221 (58%), Gaps = 3/221 (1%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           + D+G + +   GA  VAE +K+   L  + L+ N IGDEGA  +A+ LK N T+T +DL
Sbjct: 157 IADLGRDGLGDIGARAVAEALKDNTCLKGLALWDNSIGDEGAVALAEMLKHNTTLTGLDL 216

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N+I  +GA A+A +LK N+ +  L L  N IG +GA AL+E+LK +  +  L L    
Sbjct: 217 WRNSIGPEGAVALAEMLKHNTALEQLFLMSNRIGPEGAAALAEMLKHNTTLEELYLNNNS 276

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G  GA  +A+ML++N T++ LDL  N + D+GA  LA+  K  N  L  + L  N I D
Sbjct: 277 MGDEGAVALAEMLKHNTTMTWLDLNNNSIGDKGAVALAEMLK-HNTTLEELYLYNNRIGD 335

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
           +GA A+A+ LK N   A+  L L NN +T  G +AL  A D
Sbjct: 336 EGAVALAEMLKHN--TALEELYLDNNSITPVGGAALGAALD 374



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/235 (37%), Positives = 127/235 (54%), Gaps = 2/235 (0%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +GA A+A+ L+ N  L+ L L  NSIGDEG  AL   L      L  LD+  NSI  +
Sbjct: 166 GDIGARAVAEALKDNTCLKGLALWDNSIGDEGAVALAEMLK-HNTTLTGLDLWRNSIGPE 224

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K+  +L  + L  N IG EGA  +A+ LK N T+  + L  N++  +GA A
Sbjct: 225 GAVALAEMLKHNTALEQLFLMSNRIGPEGAAALAEMLKHNTTLEELYLNNNSMGDEGAVA 284

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A +LK N+ +T LDL  N IG  GA AL+E+LK +  +  L L   +IG  GA  +A+M
Sbjct: 285 LAEMLKHNTTMTWLDLNNNSIGDKGAVALAEMLKHNTTLEELYLYNNRIGDEGAVALAEM 344

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
           L++N  +  L L  N +   G   L  +    N  L+ +D+  N      AF  A
Sbjct: 345 LKHNTALEELYLDNNSITPVGGAALGAALD-ENRTLSRLDIEKNSTATARAFGAA 398



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 114/205 (55%), Gaps = 1/205 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GDEG   LAE L +N T   +    N I   G  A   +L+ N AL+ L L  N IG 
Sbjct: 192 SIGDEGAVALAEMLKHNTTLTGLDLWRNSIGPEGAVALAEMLKHNTALEQLFLMSNRIGP 251

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           EG   L ++L  N  +E L L++  + DEGA A+AE+LK+N+ +  L+LNNN I   G  
Sbjct: 252 EGAAALAEMLKHNTTLEELYLNNNSMGDEGAVALAEMLKHNTTMTWLDLNNNSIGDKGAV 311

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LAE L  N+T+  L+L  N  G  GA ALA+ L+ N +L EL+L  NSI   G  AL +
Sbjct: 312 ALAEMLKHNTTLEELYLYNNRIGDEGAVALAEMLKHNTALEELYLDNNSITPVGGAALGA 371

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAF 377
            L   +  L+ LDI  NS +   AF
Sbjct: 372 ALDENR-TLSRLDIEKNSTATARAF 395



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 128/259 (49%), Gaps = 29/259 (11%)

Query: 168 DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           D+     GD G   +AE+L  N   + ++   N I   G  A   +L+ N  L  L+L  
Sbjct: 159 DLGRDGLGDIGARAVAEALKDNTCLKGLALWDNSIGDEGAVALAEMLKHNTTLTGLDLWR 218

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N IG EG   L ++L  N  +E+L L S  +  EGA A+AE+LK+N+ L  L LNNN + 
Sbjct: 219 NSIGPEGAVALAEMLKHNTALEQLFLMSNRIGPEGAAALAEMLKHNTTLEELYLNNNSMG 278

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
             G  +LAE L  N+T+  L LN N  G  GA ALA+ L+ N +L EL+L+ N IGDEG 
Sbjct: 279 DEGAVALAEMLKHNTTMTWLDLNNNSIGDKGAVALAEMLKHNTTLEELYLYNNRIGDEGA 338

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            AL                             AE +K+  +L  + L  N I   G   +
Sbjct: 339 VAL-----------------------------AEMLKHNTALEELYLDNNSITPVGGAAL 369

Query: 408 ADALKQNRTITTIDLGGNN 426
             AL +NRT++ +D+  N+
Sbjct: 370 GAALDENRTLSRLDIEKNS 388



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 92/171 (53%), Gaps = 3/171 (1%)

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           A+  N      DLG + +   GA A+A  LKDN+ +  L L  N IG +GA AL+E+LK 
Sbjct: 148 AIANNTCGEIADLGRDGLGDIGARAVAEALKDNTCLKGLALWDNSIGDEGAVALAEMLKH 207

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +  +  L L    IG  GA  +A+ML++N  +  L L +N +  EGA  LA+  K  N  
Sbjct: 208 NTTLTGLDLWRNSIGPEGAVALAEMLKHNTALEQLFLMSNRIGPEGAAALAEMLK-HNTT 266

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           L  + L  N + D+GA A+A+ LK N    +T L+L NN +   G  AL +
Sbjct: 267 LEELYLNNNSMGDEGAVALAEMLKHN--TTMTWLDLNNNSIGDKGAVALAE 315



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 3/144 (2%)

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           R + +N+     DL  + +G  GA+A++E LK +  +  L L    IG  GA  +A+ML+
Sbjct: 147 RAIANNTCGEIADLGRDGLGDIGARAVAEALKDNTCLKGLALWDNSIGDEGAVALAEMLK 206

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           +N T++ LDL  N +  EGA  LA+  K  N AL  + L  N I  +GA A+A+ LK N 
Sbjct: 207 HNTTLTGLDLWRNSIGPEGAVALAEMLK-HNTALEQLFLMSNRIGPEGAAALAEMLKHN- 264

Query: 557 DVAVTSLNLANNFLTKFGQSALTD 580
              +  L L NN +   G  AL +
Sbjct: 265 -TTLEELYLNNNSMGDEGAVALAE 287



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 67/137 (48%)

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           +G  +  + ++ LC  L  +  V RL L + DL D+ A  +   +   + LRVL L++N 
Sbjct: 772 TGLTMHPDPLRVLCQRLHLSGVVTRLILVACDLDDKAAVVLGRHMHQLNHLRVLNLSHNA 831

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I   G  +L+E       I +L L+GN   A G   LA+ +  N+ L  + L  N + +E
Sbjct: 832 IGDVGANALSEPFFGQCCIATLGLDGNRITAAGVECLARAMVANELLSTISLVNNPVSEE 891

Query: 346 GIRALMSGLSSRKGKLA 362
           G+  +   +  ++  LA
Sbjct: 892 GVGPMAEAVVVKRRLLA 908



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 47/94 (50%)

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           K A  +  ++     L  +NL  N IGD GA  +++       I T+ L GN I + G  
Sbjct: 807 KAAVVLGRHMHQLNHLRVLNLSHNAIGDVGANALSEPFFGQCCIATLGLDGNRITAAGVE 866

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            +AR +  N +++++ L  NP+  +G   ++E +
Sbjct: 867 CLARAMVANELLSTISLVNNPVSEEGVGPMAEAV 900



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 55/109 (50%)

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +T + L   ++  K A  + R +   + +  L+L++N IG  GA ALSE       I TL
Sbjct: 794 VTRLILVACDLDDKAAVVLGRHMHQLNHLRVLNLSHNAIGDVGANALSEPFFGQCCIATL 853

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L   +I A+G E +A  +  N  +S + L  N + +EG   +A++  V
Sbjct: 854 GLDGNRITAAGVECLARAMVANELLSTISLVNNPVSEEGVGPMAEAVVV 902



 Score = 39.7 bits (91), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 37/80 (46%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L+ LNLS N IGD G   L +       +  L L    +   G + +A  +  N +L  +
Sbjct: 822 LRVLNLSHNAIGDVGANALSEPFFGQCCIATLGLDGNRITAAGVECLARAMVANELLSTI 881

Query: 280 ELNNNMIDYSGFTSLAEALL 299
            L NN +   G   +AEA++
Sbjct: 882 SLVNNPVSEEGVGPMAEAVV 901


>gi|389594235|ref|XP_003722364.1| ribonuclease inhibitor-like protein [Leishmania major strain
           Friedlin]
 gi|321438862|emb|CBZ12622.1| ribonuclease inhibitor-like protein [Leishmania major strain
           Friedlin]
          Length = 738

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 191/368 (51%), Gaps = 17/368 (4%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N  G    + L  +L  N+    L LS   LRD+GA+ IA L+K N  L  +++ +N
Sbjct: 153 LPENGFGVCSAEALAAVLSRNSHYSVLDLSGNRLRDDGARFIAHLIKRNRTLVHIDVASN 212

Query: 285 MIDYSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLH 338
            I + G   +A ALLEN+T+ SL +      NGN+ G  GA A+ + L  N+ L  L++ 
Sbjct: 213 DIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPGAEAIGEVLRSNEVLARLNVS 272

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G  G+  + S L  R   L  L++ +N++  +GA  +A  ++      W  L  N 
Sbjct: 273 SNGLGAGGVAFIASAL-ERNSSLTRLNLSSNNLGLEGARVLASALEAAHVTHW-ELQRNH 330

Query: 399 IGDEGA----EKIADALKQNRTITT-IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           + D+G       +A A++    +   +DL  N +    A A+ +VL  +  +T+L L+ N
Sbjct: 331 LDDKGGACFLNALAGAIRNGYDVVEYLDLDNNALGEGSAEAVGKVLAVSGSLTTLRLSGN 390

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           P+GA G KA+S  L  + ++++L L  C I   GA  +  +L  N+T+  LD+  N ++D
Sbjct: 391 PLGA-GVKAISTGLNENHSLSSLHLSMCSIDHIGAAALGAVLCVNHTLRHLDMSNNRVKD 449

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA  LA+    VN+ LTS +L+ N I   G   +A+A++ N    +  LNL  N + + 
Sbjct: 450 GGAVELAKGL-AVNKCLTSWNLSSNRIGHAGGLEMAKAVQKNR--TLRHLNLRRNLMLEA 506

Query: 574 GQSALTDA 581
              A++D+
Sbjct: 507 TGEAISDS 514



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 166/357 (46%), Gaps = 14/357 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           +S +D+SG    D+G  F+A  +  N+T   +  A+N I   G       L  N  + +L
Sbjct: 176 YSVLDLSGNRLRDDGARFIAHLIKRNRTLVHIDVASNDIGHVGGVLIARALLENNTVISL 235

Query: 224 NL------SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           ++      +GN IG  G + + ++L  N  + RL +SS  L   G   IA  L+ NS L 
Sbjct: 236 DIGARAGVNGNHIGTPGAEAIGEVLRSNEVLARLNVSSNGLGAGGVAFIASALERNSSLT 295

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY----GGALGANALAKGLE-GNKSL 332
            L L++N +   G   LA AL E + +    L  N+    GGA   NALA  +  G   +
Sbjct: 296 RLNLSSNNLGLEGARVLASAL-EAAHVTHWELQRNHLDDKGGACFLNALAGAIRNGYDVV 354

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L L  N++G+    A+   L+   G L  L +  N + A G   ++  +    SL  +
Sbjct: 355 EYLDLDNNALGEGSAEAVGKVLAV-SGSLTTLRLSGNPLGA-GVKAISTGLNENHSLSSL 412

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L M  I   GA  +   L  N T+  +D+  N +   GA  +A+ L  N  +TS +L+ 
Sbjct: 413 HLSMCSIDHIGAAALGAVLCVNHTLRHLDMSNNRVKDGGAVELAKGLAVNKCLTSWNLSS 472

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           N IG  G   +++ ++ +  +  L L    +  +  E ++D  R NNT+  LD+  N
Sbjct: 473 NRIGHAGGLEMAKAVQKNRTLRHLNLRRNLMLEATGEAISDSFRANNTLERLDVAYN 529


>gi|326430769|gb|EGD76339.1| hypothetical protein PTSG_11676 [Salpingoeca sp. ATCC 50818]
          Length = 445

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 181/362 (50%), Gaps = 9/362 (2%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +T+ +  K  +  + +D +  N GD  L  +AE+L  N +  +++ +   ++  G +   
Sbjct: 7   KTIQDLEKNDQGKAELDFTDSNLGDAKLQKVAEALHKNSSVRKINLSGTNMSDIGARYIS 66

Query: 212 GVLQSNIA---LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
             L   +    + T+    NPIG +G + L   L     +  ++L++  L D GA AIA 
Sbjct: 67  DALAHKLTPTNVTTIIFDKNPIGPDGGQYLATALKQCLSLNTVKLNNCALGDNGAIAIAN 126

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L NN  +  LEL NN+I      + + A   N  +  L L  N   + GA  LA+GL  
Sbjct: 127 SLVNNDHIVTLELGNNLIGDQAARAFSRAFERNDCLEGLSLWKNAILSAGAQYLAEGLTR 186

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN--C 386
           N++L+ L L GN IG +G  +    L     ++  L +G NS++ +G  ++A  +K+  C
Sbjct: 187 NRTLQWLGLGGNKIGPDGALSFAQQLGHM--RIHWLGLGGNSLTDQGIIYIASALKDDGC 244

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
             L  I L  N I D G EK+A AL  N  + ++ LGGN I ++G    + +L+ N+ + 
Sbjct: 245 -DLQSIGLGGNGITDHGVEKLARALWTNTRLESLGLGGNEISTEGCEFFSEMLRVNTTLK 303

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML-RYNNTISILD 505
            L L+ N +  DG +AL++ L  +  + TL +        GA ++AD+L R N  + +LD
Sbjct: 304 KLILSSNLVDDDGLRALADGLTVNNTLETLLVAANPFTDVGALYLADILCRSNTCLQVLD 363

Query: 506 LR 507
           + 
Sbjct: 364 IH 365



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 167/378 (44%), Gaps = 64/378 (16%)

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG----------- 311
           +K I +L KN+     L+  ++ +  +    +AEAL +NS++R ++L+G           
Sbjct: 6   SKTIQDLEKNDQGKAELDFTDSNLGDAKLQKVAEALHKNSSVRKINLSGTNMSDIGARYI 65

Query: 312 --------------------NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
                               N  G  G   LA  L+   SL  + L+  ++GD G  A+ 
Sbjct: 66  SDALAHKLTPTNVTTIIFDKNPIGPDGGQYLATALKQCLSLNTVKLNNCALGDNGAIAIA 125

Query: 352 SGLSSRKGKLAVLDIGN----------------------------NSISAKGAFHVAEYI 383
           + L +    +  L++GN                            N+I + GA ++AE +
Sbjct: 126 NSLVNND-HIVTLELGNNLIGDQAARAFSRAFERNDCLEGLSLWKNAILSAGAQYLAEGL 184

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
              ++L W+ L  N IG +GA   A  L   R I  + LGGN++  +G   IA  LKD+ 
Sbjct: 185 TRNRTLQWLGLGGNKIGPDGALSFAQQLGHMR-IHWLGLGGNSLTDQGIIYIASALKDDG 243

Query: 444 V-ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             + S+ L  N I   G + L+  L  +  + +L LG  +I   G EF ++MLR N T+ 
Sbjct: 244 CDLQSIGLGGNGITDHGVEKLARALWTNTRLESLGLGGNEISTEGCEFFSEMLRVNTTLK 303

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L +N + D+G + LA     VN  L ++ +A N   D GA  +A  L    +  +  
Sbjct: 304 KLILSSNLVDDDGLRALADGL-TVNNTLETLLVAANPFTDVGALYLADIL-CRSNTCLQV 361

Query: 563 LNLANNFLTKFGQSALTD 580
           L++ +  ++  G+  + D
Sbjct: 362 LDIHDADMSPAGEQQVVD 379



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 117/260 (45%), Gaps = 29/260 (11%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+ L  N S+R+++L G ++ D G R +   L+ +     V  I    I  K       
Sbjct: 37  VAEALHKNSSVRKINLSGTNMSDIGARYISDALAHKLTPTNVTTI----IFDK------- 85

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
                          N IG +G + +A ALKQ  ++ T+ L    +   GA AIA  L +
Sbjct: 86  ---------------NPIGPDGGQYLATALKQCLSLNTVKLNNCALGDNGAIAIANSLVN 130

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  I +L+L  N IG   A+A S   + +  +  L L    I ++GA+++A+ L  N T+
Sbjct: 131 NDHIVTLELGNNLIGDQAARAFSRAFERNDCLEGLSLWKNAILSAGAQYLAEGLTRNRTL 190

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
             L L  N +  +GA   AQ    +   +  + L  N + D G   IA ALK ++   + 
Sbjct: 191 QWLGLGGNKIGPDGALSFAQQLGHMR--IHWLGLGGNSLTDQGIIYIASALK-DDGCDLQ 247

Query: 562 SLNLANNFLTKFGQSALTDA 581
           S+ L  N +T  G   L  A
Sbjct: 248 SIGLGGNGITDHGVEKLARA 267



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 2/216 (0%)

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G  +LAE L  N+T + +    N I   G  +F   L  ++ +  L L GN + D+G+  
Sbjct: 176 GAQYLAEGLTRNRTLQWLGLGGNKIGPDGALSFAQQL-GHMRIHWLGLGGNSLTDQGIIY 234

Query: 238 LCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
           +   L D+   ++ + L    + D G + +A  L  N+ L  L L  N I   G    +E
Sbjct: 235 IASALKDDGCDLQSIGLGGNGITDHGVEKLARALWTNTRLESLGLGGNEISTEGCEFFSE 294

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
            L  N+T++ L L+ N     G  ALA GL  N +L  L +  N   D G   L   L  
Sbjct: 295 MLRVNTTLKKLILSSNLVDDDGLRALADGLTVNNTLETLLVAANPFTDVGALYLADILCR 354

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
               L VLDI +  +S  G   V + ++   SL ++
Sbjct: 355 SNTCLQVLDIHDADMSPAGEQQVVDQLRKDSSLHFL 390


>gi|320168153|gb|EFW45052.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 866

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 180/365 (49%), Gaps = 27/365 (7%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLS-GNP---------IGDEGVKCLCDILVDNAGVERL 251
           +       F   L   IA++ ++ S  NP         IG    KC  D  +D A   R 
Sbjct: 133 VVPGATTCFVHALSGEIAVQVVSCSVDNPPKRVRQVSRIGSARAKCWDDEGLDRA---RS 189

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
            L S      G +A AE +       V E    M+ Y   T   + L +     S  L  
Sbjct: 190 ALCSTCALHSG-RADAEFMNP-----VAEPCFQMLSYQNMTEKQQQLFDTVEDASQLLEV 243

Query: 312 NYG------GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            +       G   A A+A+ ++ N ++ EL L GN I D G RA+   + +    L V+D
Sbjct: 244 KHSLCKKQIGNADAKAVAEAIKVNTTMTELKLGGNLIADVGARAIAEAVRA-NCTLTVVD 302

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I   GA   AE +K   +L  ++L  N IGD GA+ IA+ALK N+T+TT+ L  N
Sbjct: 303 LTENRIGDAGARAFAETLKVNNTLTKLDLDENQIGDAGAQAIAEALKVNKTLTTLGLWQN 362

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I + GA AIA  LK N+ +T L L  N IG DGA+A++E L+ +  +  L L   QI  
Sbjct: 363 QIGAAGAQAIADALKVNTTLTDLALYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITC 422

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
           +GA+ +A+ L+ N T++ LDL +N + D GA+ +A++ K VNE LT + L  N +  DG 
Sbjct: 423 TGAQALAEALKANTTVTKLDLGSNQIGDAGARAIAEALK-VNETLTMLYLNNNFLTTDGI 481

Query: 546 FAIAQ 550
            A  Q
Sbjct: 482 AAFRQ 486



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 132/271 (48%), Gaps = 29/271 (10%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S     I  A  KA    ++ N  +  L L GN I D G + + + +  N  +  + L+ 
Sbjct: 246 SLCKKQIGNADAKAVAEAIKVNTTMTELKLGGNLIADVGARAIAEAVRANCTLTVVDLTE 305

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + D GA+A AE LK N+ L  L+L+ N I  +G  ++AEAL  N T+ +L L  N  G
Sbjct: 306 NRIGDAGARAFAETLKVNNTLTKLDLDENQIGDAGAQAIAEALKVNKTLTTLGLWQNQIG 365

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           A GA A+A  L+ N +L +L L+ N IGD+G +A                          
Sbjct: 366 AAGAQAIADALKVNTTLTDLALYQNKIGDDGAQA-------------------------- 399

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
              +AE ++   +L  + L+ N I   GA+ +A+ALK N T+T +DLG N I   GA AI
Sbjct: 400 ---IAEALEVNTTLTKLYLWENQITCTGAQALAEALKANTTVTKLDLGSNQIGDAGARAI 456

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           A  LK N  +T L L  N +  DG  A  + 
Sbjct: 457 AEALKVNETLTMLYLNNNFLTTDGIAAFRQT 487



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 132/282 (46%), Gaps = 32/282 (11%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +  +  G+     +AE++  N T  E+    N I   G +A    +++N  L  ++L+ N
Sbjct: 247 LCKKQIGNADAKAVAEAIKVNTTMTELKLGGNLIADVGARAIAEAVRANCTLTVVDLTEN 306

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G +   + L  N  + +L L    + D GA+AIAE LK N  L  L L  N I  
Sbjct: 307 RIGDAGARAFAETLKVNNTLTKLDLDENQIGDAGAQAIAEALKVNKTLTTLGLWQNQIGA 366

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++A+AL  N+T+  L L  N  G  GA A+A+ LE N +L +L+L  N I   G +
Sbjct: 367 AGAQAIADALKVNTTLTDLALYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITCTGAQ 426

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   L +    +  LD+G+N I                            GD GA  IA
Sbjct: 427 ALAEALKANT-TVTKLDLGSNQI----------------------------GDAGARAIA 457

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           +ALK N T+T + L  N + + G   IA   +  + I  LDL
Sbjct: 458 EALKVNETLTMLYLNNNFLTTDG---IAAFRQTGNAICDLDL 496



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 103/197 (52%), Gaps = 3/197 (1%)

Query: 157 FAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            A+ +RA    + VD++    GD G    AE+L  N T  ++    N I  AG +A    
Sbjct: 288 IAEAVRANCTLTVVDLTENRIGDAGARAFAETLKVNNTLTKLDLDENQIGDAGAQAIAEA 347

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L TL L  N IG  G + + D L  N  +  L L    + D+GA+AIAE L+ N
Sbjct: 348 LKVNKTLTTLGLWQNQIGAAGAQAIADALKVNTTLTDLALYQNKIGDDGAQAIAEALEVN 407

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L  L L  N I  +G  +LAEAL  N+T+  L L  N  G  GA A+A+ L+ N++L 
Sbjct: 408 TTLTKLYLWENQITCTGAQALAEALKANTTVTKLDLGSNQIGDAGARAIAEALKVNETLT 467

Query: 334 ELHLHGNSIGDEGIRAL 350
            L+L+ N +  +GI A 
Sbjct: 468 MLYLNNNFLTTDGIAAF 484


>gi|398019091|ref|XP_003862710.1| ribonuclease inhibitor-like protein [Leishmania donovani]
 gi|322500940|emb|CBZ36017.1| ribonuclease inhibitor-like protein [Leishmania donovani]
          Length = 736

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 188/357 (52%), Gaps = 17/357 (4%)

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L  +L  N+    L LS   LRD+GA+ IA+L+K N  L  +++ +N I + G   +A
Sbjct: 161 EALAAVLSRNSHYSVLDLSGNCLRDDGARFIAQLIKRNRTLVHIDVASNDIGHVGGVLIA 220

Query: 296 EALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
            ALLEN+T+ SL +      NGN+ G  GA A+ + L  N+ L  L++  N +G  G+  
Sbjct: 221 RALLENNTVISLDIGARAGVNGNHIGTPGAEAIGEVLRCNEVLARLNVSSNGLGAGGVAF 280

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           + S L  R G L  L++ +N++  +GA  +A  ++      W  L  N + D+G     +
Sbjct: 281 IASAL-ERNGSLTRLNLSSNNLGLEGARVLASALEAAHVTHW-ELQRNHLDDKGGACFLN 338

Query: 410 AL-----KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           AL       +  +  +DL  N +    A A  +VL  ++ +T+L L  NP+GA G KA+S
Sbjct: 339 ALAGAIRNGHDVVEYLDLDNNALGEGCADAAGKVLAVSASLTTLRLCGNPLGA-GVKAIS 397

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
             L  + ++N+L L  C I   GA  +  +L  N+T+  LD+  N ++D GA  LA+   
Sbjct: 398 TGLNENHSLNSLYLSKCSIDHIGAAALGAVLCVNHTLRHLDMSNNRVKDGGAVELAKGL- 456

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            VN+ LT+ +L+ N I   G   +A+A++ N    +  LNL  N + +    A++D+
Sbjct: 457 AVNKCLTTWNLSSNRIGHAGGLEMAKAVQKNR--TLRHLNLRRNLMLEATGEAISDS 511



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 188/396 (47%), Gaps = 29/396 (7%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           +S +D+SG    D+G  F+A+ +  N+T   +  A+N I   G     GVL +   L+  
Sbjct: 173 YSVLDLSGNCLRDDGARFIAQLIKRNRTLVHIDVASNDIGHVG-----GVLIARALLENN 227

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +    IG              AGV    + +      GA+AI E+L+ N +L  L +++
Sbjct: 228 TVISLDIGAR------------AGVNGNHIGT-----PGAEAIGEVLRCNEVLARLNVSS 270

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +   G   +A AL  N ++  L+L+ N  G  GA  LA  LE    +    L  N + 
Sbjct: 271 NGLGAGGVAFIASALERNGSLTRLNLSSNNLGLEGARVLASALEA-AHVTHWELQRNHLD 329

Query: 344 DEGIRALMSGLSS--RKGKLAV--LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           D+G    ++ L+   R G   V  LD+ NN++    A    + +    SL  + L  N +
Sbjct: 330 DKGGACFLNALAGAIRNGHDVVEYLDLDNNALGEGCADAAGKVLAVSASLTTLRLCGNPL 389

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G  G + I+  L +N ++ ++ L   +I   GA+A+  VL  N  +  LD++ N +   G
Sbjct: 390 G-AGVKAISTGLNENHSLNSLYLSKCSIDHIGAAALGAVLCVNHTLRHLDMSNNRVKDGG 448

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           A  L++ L  +  + T  L   +IG +G   +A  ++ N T+  L+LR N + +   + +
Sbjct: 449 AVELAKGLAVNKCLTTWNLSSNRIGHAGGLEMAKAVQKNRTLRHLNLRRNLMLEATGEAI 508

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           + SF+  N  L  +D+A+N+     A +I +AL+ N
Sbjct: 509 SDSFR-SNNTLERLDVAYNDFSYACAMSIERALERN 543



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 10/184 (5%)

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           AE +A  L +N   + +DL GN +   GA  IA+++K N  +  +D+A N IG  G   +
Sbjct: 160 AEALAAVLSRNSHYSVLDLSGNCLRDDGARFIAQLIKRNRTLVHIDVASNDIGHVGGVLI 219

Query: 464 SEVLKFHGNINTLKLGW------CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           +  L  +  + +L +G         IG  GAE + ++LR N  ++ L++ +NGL   G  
Sbjct: 220 ARALLENNTVISLDIGARAGVNGNHIGTPGAEAIGEVLRCNEVLARLNVSSNGLGAGGVA 279

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 577
            +A + +  N +LT ++L+ N +  +GA  +A AL+A     VT   L  N L   G + 
Sbjct: 280 FIASALE-RNGSLTRLNLSSNNLGLEGARVLASALEA---AHVTHWELQRNHLDDKGGAC 335

Query: 578 LTDA 581
             +A
Sbjct: 336 FLNA 339


>gi|17546075|ref|NP_519477.1| GALA protein 4 [Ralstonia solanacearum GMI1000]
 gi|17428371|emb|CAD15058.1| type III effector protein gala6 [Ralstonia solanacearum GMI1000]
          Length = 620

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 146/437 (33%), Positives = 225/437 (51%), Gaps = 78/437 (17%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++  S+ + G   GD      A++L  +++ + +  + N I   G +A  G       L 
Sbjct: 213 KSLVSLSLIGCGIGDRA----AQALVASRSIQCLDLSVNRIGRDGAQALAGA-----PLV 263

Query: 222 TLNLSGNPIGDEGVKCLC--------DIL---VDNAGVE---------RLQLSSVDLRDE 261
           +LNL  N IG+EG + L         D+    V NAG E         +L L+   +  +
Sbjct: 264 SLNLHNNEIGNEGARVLATSRTLTSLDVSNNGVGNAGAEAFAGNTVLKQLSLAGGMISGD 323

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+A+A+    N  L  L+L+NN +  +G    A+AL ++ +  SL L GN  GA GA A
Sbjct: 324 GAQALAD----NKSLTDLDLSNNRLGDAG----AQALADSESFVSLKLGGNEIGADGAEA 375

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           LA+    N  L+ L+L  N IG  G+ AL       + KL  LD+   +I + GA  +A 
Sbjct: 376 LAR----NVVLQSLNLSYNPIGFWGVNALG------RAKLRKLDLCACAIDSDGASALAR 425

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
                 SL  + L  N IGD+GA     AL +N T+T ++L GNNIH+ GA A+A    +
Sbjct: 426 NT----SLASLYLGSNRIGDDGAR----ALAKNSTLTLLNLSGNNIHAVGAQALA---SN 474

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           +S+IT LDL+ N IG DG  AL+     H  + +L L   QIG++GA+ +A     + T+
Sbjct: 475 DSLIT-LDLSRNGIGDDGTAALA----CHPRLTSLNLSRNQIGSTGAQQLAK----SATL 525

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + LDL  N +  EGA+ LA+S       LT++++++N I + GA A+A      E V++T
Sbjct: 526 AELDLSENRIGPEGAEALARS-----TVLTTLNVSYNAIGEAGARALA------ESVSLT 574

Query: 562 SLNLANNFLTKFGQSAL 578
           SL+   N + + G   L
Sbjct: 575 SLDARRNGIGEDGAKVL 591



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 194/397 (48%), Gaps = 64/397 (16%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+++     G+EG   LA S    +T   +  + NG+  AG +AF G    N  LK L+L
Sbjct: 264 SLNLHNNEIGNEGARVLATS----RTLTSLDVSNNGVGNAGAEAFAG----NTVLKQLSL 315

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           +G  I  +G + L D    N  +  L LS+  L D GA+A+A+    +     L+L  N 
Sbjct: 316 AGGMISGDGAQALAD----NKSLTDLDLSNNRLGDAGAQALAD----SESFVSLKLGGNE 367

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL-------------------AKGL 326
           I   G    AEAL  N  ++SL+L+ N  G  G NAL                   A  L
Sbjct: 368 IGADG----AEALARNVVLQSLNLSYNPIGFWGVNALGRAKLRKLDLCACAIDSDGASAL 423

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             N SL  L+L  N IGD+G RAL     ++   L +L++  N+I A GA    + + + 
Sbjct: 424 ARNTSLASLYLGSNRIGDDGARAL-----AKNSTLTLLNLSGNNIHAVGA----QALASN 474

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
            SL+ ++L  N IGD+G      AL  +  +T+++L  N I S GA  +A+    ++ + 
Sbjct: 475 DSLITLDLSRNGIGDDGTA----ALACHPRLTSLNLSRNQIGSTGAQQLAK----SATLA 526

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            LDL+ N IG +GA+AL+        + TL + +  IG +GA  +A+ +    +++ LD 
Sbjct: 527 ELDLSENRIGPEGAEALARSTV----LTTLNVSYNAIGEAGARALAESV----SLTSLDA 578

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           R NG+ ++GAK L  + ++         LA +  R D
Sbjct: 579 RRNGIGEDGAKVLEANTRITGTPQNPNFLAEDVPRPD 615



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 108/310 (34%), Positives = 154/310 (49%), Gaps = 42/310 (13%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++ + +D+S    GD G   LA+S    ++   +    N I A G +A    L  N+ L+
Sbjct: 332 KSLTDLDLSNNRLGDAGAQALADS----ESFVSLKLGGNEIGADGAEA----LARNVVLQ 383

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +LNLS NPIG  GV  L       A + +L L +  +  +GA A+A     N+ L  L L
Sbjct: 384 SLNLSYNPIGFWGVNAL-----GRAKLRKLDLCACAIDSDGASALAR----NTSLASLYL 434

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I   G    A AL +NST+  L+L+GN   A+GA ALA     N SL  L L  N 
Sbjct: 435 GSNRIGDDG----ARALAKNSTLTLLNLSGNNIHAVGAQALAS----NDSLITLDLSRNG 486

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD+G  AL         +L  L++  N I + GA  +A+      +L  ++L  N IG 
Sbjct: 487 IGDDGTAALAC-----HPRLTSLNLSRNQIGSTGAQQLAK----SATLAELDLSENRIGP 537

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGAE    AL ++  +TT+++  N I   GA    R L ++  +TSLD   N IG DGAK
Sbjct: 538 EGAE----ALARSTVLTTLNVSYNAIGEAGA----RALAESVSLTSLDARRNGIGEDGAK 589

Query: 462 ALSEVLKFHG 471
            L    +  G
Sbjct: 590 VLEANTRITG 599



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 154/328 (46%), Gaps = 72/328 (21%)

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           A L +  ++SL+LNG   G  GA  LA     +KSL  L L G  IGD   +AL++  S 
Sbjct: 184 AHLASMPLKSLNLNGIEIGVEGARTLAA----SKSLVSLSLIGCGIGDRAAQALVASRS- 238

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
               +  LD+  N I   GA  +A        L+ +NL+ N+IG+EGA  +A     +RT
Sbjct: 239 ----IQCLDLSVNRIGRDGAQALA-----GAPLVSLNLHNNEIGNEGARVLA----TSRT 285

Query: 417 ITTIDLGGNNIHSKGASAI--------------------ARVLKDNSVITSLDLAYNPIG 456
           +T++D+  N + + GA A                     A+ L DN  +T LDL+ N +G
Sbjct: 286 LTSLDVSNNGVGNAGAEAFAGNTVLKQLSLAGGMISGDGAQALADNKSLTDLDLSNNRLG 345

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD-------MLRYNNT--------- 500
             GA+AL++   F     +LKLG  +IGA GAE +A         L YN           
Sbjct: 346 DAGAQALADSESFV----SLKLGGNEIGADGAEALARNVVLQSLNLSYNPIGFWGVNALG 401

Query: 501 ---ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
              +  LDL A  +  +GA  LA+     N +L S+ L  N I DDGA A+A+      +
Sbjct: 402 RAKLRKLDLCACAIDSDGASALAR-----NTSLASLYLGSNRIGDDGARALAK------N 450

Query: 558 VAVTSLNLANNFLTKFGQSALTDAKDLV 585
             +T LNL+ N +   G  AL     L+
Sbjct: 451 STLTLLNLSGNNIHAVGAQALASNDSLI 478


>gi|440792441|gb|ELR13663.1| leucine rich repeat containing protein [Acanthamoeba castellanii str.
            Neff]
          Length = 1544

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 169/348 (48%), Gaps = 17/348 (4%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  +S+D+ G    D G   LA  L    T        N +   G +A    L  N ++ 
Sbjct: 742  RQLTSLDIRGNEIDDRGTVDLARFLATTDTLRYFDLRWNKVGVVGARAVAQALAHNTSVG 801

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQL-------SSVDLR-----DEGAKAIAEL 269
             +NL  N +G +GV  L D L+ N  V  L L       + ++ R     DE  K +  L
Sbjct: 802  IVNLRENRLGMDGVMTLADFLLTNRSVYSLDLRANISPPTEMNYRIGESGDEAIKYLGAL 861

Query: 270  LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
            LK NS +  L+L +N I   G  +LA AL   S++  LHL+ N     G  AL + L  N
Sbjct: 862  LKLNSTVTHLDLCSNSIGSEGAMALASALEFRSSLYILHLDFNKIDFAGVRALGRSLLVN 921

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL  L L  N + D+ + AL   L++    L  LD+  N +S KGA  +AE +K  ++L
Sbjct: 922  QSLLVLTLAHNFLEDDAVCALAKALAT-NATLTKLDLQKNHVSNKGASALAEALKTNQTL 980

Query: 390  LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
              + L  N +GD GA ++ADALK N  + +++L  N I S+G  A A +L  N+ +   +
Sbjct: 981  TELYLSYNGVGDAGAYRLADALKHNDGLLSLELENNKITSRGGKAFASMLARNTTLRFFN 1040

Query: 450  LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI-GASGAEFVADMLR 496
            L+ N I  +G  A+S  L  +   + L L   Q+ G  G +   D+LR
Sbjct: 1041 LSGNLITDEGLTAISRALMSNRASSLLDL---QVSGVDGRDECWDVLR 1085



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 187/390 (47%), Gaps = 52/390 (13%)

Query: 202  ITAAGIKAFDGVLQ-SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
             ++ GI     VL   ++ +K+L+L GN +GD G+  L D+L    G    QL+S+D+R 
Sbjct: 694  FSSKGIALLGEVLSVPSVVVKSLDLRGNRLGDGGIDRLADLLC--TGALGRQLTSLDIRG 751

Query: 261  E---------------------------------GAKAIAELLKNNSILRVLELNNNMID 287
                                              GA+A+A+ L +N+ + ++ L  N + 
Sbjct: 752  NEIDDRGTVDLARFLATTDTLRYFDLRWNKVGVVGARAVAQALAHNTSVGIVNLRENRLG 811

Query: 288  YSGFTSLAEALLENSTIRSLHLNGNYG---------GALGANA---LAKGLEGNKSLREL 335
              G  +LA+ LL N ++ SL L  N           G  G  A   L   L+ N ++  L
Sbjct: 812  MDGVMTLADFLLTNRSVYSLDLRANISPPTEMNYRIGESGDEAIKYLGALLKLNSTVTHL 871

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L  NSIG EG  AL S L  R   L +L +  N I   G   +   +   +SLL + L 
Sbjct: 872  DLCSNSIGSEGAMALASALEFRS-SLYILHLDFNKIDFAGVRALGRSLLVNQSLLVLTLA 930

Query: 396  MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             N + D+    +A AL  N T+T +DL  N++ +KGASA+A  LK N  +T L L+YN +
Sbjct: 931  HNFLEDDAVCALAKALATNATLTKLDLQKNHVSNKGASALAEALKTNQTLTELYLSYNGV 990

Query: 456  GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
            G  GA  L++ LK +  + +L+L   +I + G +  A ML  N T+   +L  N + DEG
Sbjct: 991  GDAGAYRLADALKHNDGLLSLELENNKITSRGGKAFASMLARNTTLRFFNLSGNLITDEG 1050

Query: 516  AKCLAQSFKVVNEALTSIDLAFNEI--RDD 543
               ++++  + N A + +DL  + +  RD+
Sbjct: 1051 LTAISRAL-MSNRASSLLDLQVSGVDGRDE 1079



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 154/320 (48%), Gaps = 22/320 (6%)

Query: 279  LELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALG----ANALAKGLEGNKSLR 333
            L L  +     G   L E L + +  ++SL L GN  G  G    A+ L  G  G + L 
Sbjct: 687  LTLRGHRFSSKGIALLGEVLSVPSVVVKSLDLRGNRLGDGGIDRLADLLCTGALG-RQLT 745

Query: 334  ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
             L + GN I D G   L   L++    L   D+  N +   GA  VA+ + +  S+  +N
Sbjct: 746  SLDIRGNEIDDRGTVDLARFLAT-TDTLRYFDLRWNKVGVVGARAVAQALAHNTSVGIVN 804

Query: 394  LYMNDIGDEGAEKIADALKQNRTITTIDLGGN---------NIHSKGASAI---ARVLKD 441
            L  N +G +G   +AD L  NR++ ++DL  N          I   G  AI     +LK 
Sbjct: 805  LRENRLGMDGVMTLADFLLTNRSVYSLDLRANISPPTEMNYRIGESGDEAIKYLGALLKL 864

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
            NS +T LDL  N IG++GA AL+  L+F  ++  L L + +I  +G   +   L  N ++
Sbjct: 865  NSTVTHLDLCSNSIGSEGAMALASALEFRSSLYILHLDFNKIDFAGVRALGRSLLVNQSL 924

Query: 502  SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
             +L L  N L D+    LA++    N  LT +DL  N + + GA A+A+ALK N+   +T
Sbjct: 925  LVLTLAHNFLEDDAVCALAKAL-ATNATLTKLDLQKNHVSNKGASALAEALKTNQ--TLT 981

Query: 562  SLNLANNFLTKFGQSALTDA 581
             L L+ N +   G   L DA
Sbjct: 982  ELYLSYNGVGDAGAYRLADA 1001



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 112/240 (46%), Gaps = 17/240 (7%)

Query: 121  SKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLF 180
            S PT   MN+ +G   +    + G L +     LN     L      D+   + G EG  
Sbjct: 838  SPPTE--MNYRIGESGDEAIKYLGALLK-----LNSTVTHL------DLCSNSIGSEGAM 884

Query: 181  FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
             LA +L +  +   +    N I  AG++A    L  N +L  L L+ N + D+ V  L  
Sbjct: 885  ALASALEFRSSLYILHLDFNKIDFAGVRALGRSLLVNQSLLVLTLAHNFLEDDAVCALAK 944

Query: 241  ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
             L  NA + +L L    + ++GA A+AE LK N  L  L L+ N +  +G   LA+AL  
Sbjct: 945  ALATNATLTKLDLQKNHVSNKGASALAEALKTNQTLTELYLSYNGVGDAGAYRLADALKH 1004

Query: 301  NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI----RALMSGLSS 356
            N  + SL L  N   + G  A A  L  N +LR  +L GN I DEG+    RALMS  +S
Sbjct: 1005 NDGLLSLELENNKITSRGGKAFASMLARNTTLRFFNLSGNLITDEGLTAISRALMSNRAS 1064



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 67/138 (48%), Gaps = 7/138 (5%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGI----KAFDGVLQSNIALK---TLNLSGNPIGDEG 234
            L+ +L  N     +  + N + AA I    +A D   Q+N  L    TL L GN + DEG
Sbjct: 1373 LSRALARNGNLTSLDLSWNRLDAATIAPLAEALDNRRQANAGLSLLTTLVLRGNRLQDEG 1432

Query: 235  VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            V  L   L++N  V  L L +  + DEG KA+ +L+  N +L  L L +N I   G  +L
Sbjct: 1433 VAVLARSLLNNCTVTTLNLDTNRITDEGIKAVEDLVAGNEVLAFLSLVSNGIKGEGLLAL 1492

Query: 295  AEALLENSTIRSLHLNGN 312
              AL  N +I  L L  N
Sbjct: 1493 GAALRHNRSIVKLSLERN 1510



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 73/187 (39%), Gaps = 36/187 (19%)

Query: 288  YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS-------LRELHLHGN 340
            Y    SL+ AL  N  + SL L+ N   A     LA+ L+  +        L  L L GN
Sbjct: 1367 YRFMRSLSRALARNGNLTSLDLSWNRLDAATIAPLAEALDNRRQANAGLSLLTTLVLRGN 1426

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             + DEG+  L   L                            + NC ++  +NL  N I 
Sbjct: 1427 RLQDEGVAVLARSL----------------------------LNNC-TVTTLNLDTNRIT 1457

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            DEG + + D +  N  +  + L  N I  +G  A+   L+ N  I  L L  NP+  +  
Sbjct: 1458 DEGIKAVEDLVAGNEVLAFLSLVSNGIKGEGLLALGAALRHNRSIVKLSLERNPLEREAV 1517

Query: 461  KALSEVL 467
             A  ++L
Sbjct: 1518 AAFWQLL 1524



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 8/110 (7%)

Query: 461  KALSEVLKFHGNINTLKLGWCQIGASGAEFVADML---RYNNT----ISILDLRANGLRD 513
            ++LS  L  +GN+ +L L W ++ A+    +A+ L   R  N     ++ L LR N L+D
Sbjct: 1371 RSLSRALARNGNLTSLDLSWNRLDAATIAPLAEALDNRRQANAGLSLLTTLVLRGNRLQD 1430

Query: 514  EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
            EG   LA+S  + N  +T+++L  N I D+G  A+   +  NE +A  SL
Sbjct: 1431 EGVAVLARSL-LNNCTVTTLNLDTNRITDEGIKAVEDLVAGNEVLAFLSL 1479



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 7/143 (4%)

Query: 392  INLYMNDIGDEGAEKIADALKQNRT-------ITTIDLGGNNIHSKGASAIARVLKDNSV 444
            ++L  N +       +A+AL   R        +TT+ L GN +  +G + +AR L +N  
Sbjct: 1386 LDLSWNRLDAATIAPLAEALDNRRQANAGLSLLTTLVLRGNRLQDEGVAVLARSLLNNCT 1445

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +T+L+L  N I  +G KA+ +++  +  +  L L    I   G   +   LR+N +I  L
Sbjct: 1446 VTTLNLDTNRITDEGIKAVEDLVAGNEVLAFLSLVSNGIKGEGLLALGAALRHNRSIVKL 1505

Query: 505  DLRANGLRDEGAKCLAQSFKVVN 527
             L  N L  E      Q    VN
Sbjct: 1506 SLERNPLEREAVAAFWQLLASVN 1528



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 55/117 (47%)

Query: 161  LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
            L   +++ + G    DEG+  LA SL  N T   ++   N IT  GIKA + ++  N  L
Sbjct: 1415 LSLLTTLVLRGNRLQDEGVAVLARSLLNNCTVTTLNLDTNRITDEGIKAVEDLVAGNEVL 1474

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
              L+L  N I  EG+  L   L  N  + +L L    L  E   A  +LL + ++ R
Sbjct: 1475 AFLSLVSNGIKGEGLLALGAALRHNRSIVKLSLERNPLEREAVAAFWQLLASVNLQR 1531



 Score = 42.7 bits (99), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 7/142 (4%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAE-------EVSFAANGITAAGIKAFDGVLQS 216
             +S+D+S        +  LAE+L   + A         +    N +   G+      L +
Sbjct: 1383 LTSLDLSWNRLDAATIAPLAEALDNRRQANAGLSLLTTLVLRGNRLQDEGVAVLARSLLN 1442

Query: 217  NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
            N  + TLNL  N I DEG+K + D++  N  +  L L S  ++ EG  A+   L++N  +
Sbjct: 1443 NCTVTTLNLDTNRITDEGIKAVEDLVAGNEVLAFLSLVSNGIKGEGLLALGAALRHNRSI 1502

Query: 277  RVLELNNNMIDYSGFTSLAEAL 298
              L L  N ++     +  + L
Sbjct: 1503 VKLSLERNPLEREAVAAFWQLL 1524



 Score = 42.4 bits (98), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 7/157 (4%)

Query: 207  IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD----NAGVERLQ---LSSVDLR 259
            +++    L  N  L +L+LS N +    +  L + L +    NAG+  L    L    L+
Sbjct: 1370 MRSLSRALARNGNLTSLDLSWNRLDAATIAPLAEALDNRRQANAGLSLLTTLVLRGNRLQ 1429

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
            DEG   +A  L NN  +  L L+ N I   G  ++ + +  N  +  L L  N     G 
Sbjct: 1430 DEGVAVLARSLLNNCTVTTLNLDTNRITDEGIKAVEDLVAGNEVLAFLSLVSNGIKGEGL 1489

Query: 320  NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
             AL   L  N+S+ +L L  N +  E + A    L+S
Sbjct: 1490 LALGAALRHNRSIVKLSLERNPLEREAVAAFWQLLAS 1526


>gi|156354309|ref|XP_001623340.1| predicted protein [Nematostella vectensis]
 gi|156210028|gb|EDO31240.1| predicted protein [Nematostella vectensis]
          Length = 389

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 192/386 (49%), Gaps = 6/386 (1%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           FGD     LAE L  N +  +V   +  +   GIK     L+ N  ++TL + G  +  E
Sbjct: 6   FGDSCAIKLAEILSDNTSLTDVRIKSEILGGTGIKRLANALKVNKTVRTLGIDGGNMTSE 65

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
             + + ++L  N  V  L LS   L D GA+ IA  L  N+ +  L + N+ I  +G  +
Sbjct: 66  AGRAIGEMLRHNTTVTSLFLSGGRLGDFGARGIAIGLAQNTTIAQLSIANSSICTAGIKA 125

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           + ++L  N T+  + +  +  G   A  LA+ L  N SL ++ +  N +G  GI+ L + 
Sbjct: 126 ITKSLKNNVTLSEICIESDGFGDSCAIKLAEILSDNTSLTDVRIDSNILGGTGIKRLANA 185

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L   K  +  L I   +++++    + E +++  ++  + L    +GD GA  IA  L Q
Sbjct: 186 LKVNK-TVRTLGIAGGNMTSEAGRAIGEMLRHNTTVTSLFLSGGRLGDSGARGIAIGLAQ 244

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-KFHGN 472
            RTI  + +  ++I + G  AI +V+++   +T LDL+ NP+G DG KA++ +L K    
Sbjct: 245 KRTIAQLSIANSSIGTAGIKAITKVIQN---VTHLDLSGNPVGYDGVKAIARLLVKSCCR 301

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           +  L L  C I   GA+ +A  L  N+ +  L +  N + DEG   LA+S    NE L  
Sbjct: 302 LKFLFLDRCNIDVFGAKELAIALSRNSCLEELSVACNDINDEGMCALAESV-ASNETLQV 360

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDV 558
           + +++N +  +G   I  A + ++ V
Sbjct: 361 LYISYNNVGQNGKKVIISACETSKSV 386



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 163/322 (50%), Gaps = 7/322 (2%)

Query: 144 GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
           G +  E+ + + E  +     +S+ +SG   GD G   +A  L  N T  ++S A + I 
Sbjct: 60  GNMTSEAGRAIGEMLRHNTTVTSLFLSGGRLGDFGARGIAIGLAQNTTIAQLSIANSSIC 119

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
            AGIKA    L++N+ L  + +  +  GD     L +IL DN  +  +++ S  L   G 
Sbjct: 120 TAGIKAITKSLKNNVTLSEICIESDGFGDSCAIKLAEILSDNTSLTDVRIDSNILGGTGI 179

Query: 264 KAIAELLKNNSILRVLEL-NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           K +A  LK N  +R L +   NM   +G  ++ E L  N+T+ SL L+G   G  GA  +
Sbjct: 180 KRLANALKVNKTVRTLGIAGGNMTSEAG-RAIGEMLRHNTTVTSLFLSGGRLGDSGARGI 238

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE- 381
           A GL   +++ +L +  +SIG  GI+A+   + +    +  LD+  N +   G   +A  
Sbjct: 239 AIGLAQKRTIAQLSIANSSIGTAGIKAITKVIQN----VTHLDLSGNPVGYDGVKAIARL 294

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K+C  L ++ L   +I   GA+++A AL +N  +  + +  N+I+ +G  A+A  +  
Sbjct: 295 LVKSCCRLKFLFLDRCNIDVFGAKELAIALSRNSCLEELSVACNDINDEGMCALAESVAS 354

Query: 442 NSVITSLDLAYNPIGADGAKAL 463
           N  +  L ++YN +G +G K +
Sbjct: 355 NETLQVLYISYNNVGQNGKKVI 376


>gi|156349338|ref|XP_001622017.1| hypothetical protein NEMVEDRAFT_v1g907 [Nematostella vectensis]
 gi|156208407|gb|EDO29917.1| predicted protein [Nematostella vectensis]
          Length = 408

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 212/401 (52%), Gaps = 16/401 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVL-QSNIALK 221
            + +D+S  N G+EG  ++ E+L + N    ++  + N I   G K     L   N  L 
Sbjct: 12  LTQLDISFNNIGEEGAKYIGEALAHENCKLTQLDISLNNIGEEGAKYIGEALGHENCKLT 71

Query: 222 TLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKN-NSILRVL 279
            L++S N IG+E  K + + L  +N  + +L +S  ++ DEGAK I E L + N  L  L
Sbjct: 72  QLDISLNNIGEEEAKYIGEALGHENCKLTQLDISYNNIGDEGAKYIGEALGHENCKLTQL 131

Query: 280 ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHL 337
           +++ N I   G   + EAL  +N  +  L ++    G  GA  + + L   N  L +L +
Sbjct: 132 DISYNNIGDEGAKYICEALRHKNCKLTQLDISFIGMGDEGAKYIGEALSHENCKLTQLDI 191

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK--NCKSLLWINLY 395
             N+IG  G + +   L+    KL  L+I  N I  +GA ++ E ++  NCK L  +++ 
Sbjct: 192 CLNNIGVGGAKYIGEALAHENCKLTKLNITGN-IGNEGAKYIGEALRHENCK-LTQLDIS 249

Query: 396 MNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYN 453
              +GDEGA+ I +AL  +N  +T +++G NNI  +GA  I   L  +N  +T LD+++N
Sbjct: 250 FIGMGDEGAKYIGEALGHENCKLTQLNIGNNNIGDEGAKYIGEALSHENCKLTRLDISFN 309

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWC-QIGASGAEFVADMLRYNNT-ISILDLRANGL 511
            IG  GAK + E L  H N    KL     IG  GA+++ + L + N  +++L++  N +
Sbjct: 310 -IGVGGAKYIGEALA-HENCKLTKLNITGNIGNEGAKYIGEALAHENCKLTMLNISDNNI 367

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
            DEGAK + ++    N  LT ++++ N I D+GA  I +AL
Sbjct: 368 GDEGAKYIGEALSHENCKLTQLNISNNNIGDEGAKYICEAL 408



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 209/405 (51%), Gaps = 42/405 (10%)

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKN- 272
             N  L  L++S N IG+EG K + + L  +N  + +L +S  ++ +EGAK I E L + 
Sbjct: 7   HENCKLTQLDISFNNIGEEGAKYIGEALAHENCKLTQLDISLNNIGEEGAKYIGEALGHE 66

Query: 273 NSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGL-EGNK 330
           N  L  L+++ N I       + EAL  EN  +  L ++ N  G  GA  + + L   N 
Sbjct: 67  NCKLTQLDISLNNIGEEEAKYIGEALGHENCKLTQLDISYNNIGDEGAKYIGEALGHENC 126

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKS 388
            L +L +  N+IGDEG + +   L  +  KL  LDI    +  +GA ++ E +  +NCK 
Sbjct: 127 KLTQLDISYNNIGDEGAKYICEALRHKNCKLTQLDISFIGMGDEGAKYIGEALSHENCK- 185

Query: 389 LLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVIT 446
           L  +++ +N+IG  GA+ I +AL  +N  +T +++ G NI ++GA  I   L+ +N  +T
Sbjct: 186 LTQLDICLNNIGVGGAKYIGEALAHENCKLTKLNITG-NIGNEGAKYIGEALRHENCKLT 244

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNT-ISI 503
            LD+++  +G +GAK + E L  H N  +  L +G   IG  GA+++ + L + N  ++ 
Sbjct: 245 QLDISFIGMGDEGAKYIGEALG-HENCKLTQLNIGNNNIGDEGAKYIGEALSHENCKLTR 303

Query: 504 LDLRAN---------------------------GLRDEGAKCLAQSFKVVNEALTSIDLA 536
           LD+  N                            + +EGAK + ++    N  LT ++++
Sbjct: 304 LDISFNIGVGGAKYIGEALAHENCKLTKLNITGNIGNEGAKYIGEALAHENCKLTMLNIS 363

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            N I D+GA  I +AL ++E+  +T LN++NN +   G   + +A
Sbjct: 364 DNNIGDEGAKYIGEAL-SHENCKLTQLNISNNNIGDEGAKYICEA 407



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 197/380 (51%), Gaps = 18/380 (4%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVL- 214
            A E    + +D+S  N G+EG  ++ E+LG+ N    ++  + N I     K     L 
Sbjct: 34  LAHENCKLTQLDISLNNIGEEGAKYIGEALGHENCKLTQLDISLNNIGEEEAKYIGEALG 93

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKN- 272
             N  L  L++S N IGDEG K + + L  +N  + +L +S  ++ DEGAK I E L++ 
Sbjct: 94  HENCKLTQLDISYNNIGDEGAKYIGEALGHENCKLTQLDISYNNIGDEGAKYICEALRHK 153

Query: 273 NSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGL-EGNK 330
           N  L  L+++   +   G   + EAL  EN  +  L +  N  G  GA  + + L   N 
Sbjct: 154 NCKLTQLDISFIGMGDEGAKYIGEALSHENCKLTQLDICLNNIGVGGAKYIGEALAHENC 213

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKS 388
            L +L++ GN IG+EG + +   L     KL  LDI    +  +GA ++ E +  +NCK 
Sbjct: 214 KLTKLNITGN-IGNEGAKYIGEALRHENCKLTQLDISFIGMGDEGAKYIGEALGHENCK- 271

Query: 389 LLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVL-KDNSVIT 446
           L  +N+  N+IGDEGA+ I +AL  +N  +T +D+   NI   GA  I   L  +N  +T
Sbjct: 272 LTQLNIGNNNIGDEGAKYIGEALSHENCKLTRLDI-SFNIGVGGAKYIGEALAHENCKLT 330

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNT-ISI 503
            L++  N IG +GAK + E L  H N  +  L +    IG  GA+++ + L + N  ++ 
Sbjct: 331 KLNITGN-IGNEGAKYIGEALA-HENCKLTMLNISDNNIGDEGAKYIGEALSHENCKLTQ 388

Query: 504 LDLRANGLRDEGAKCLAQSF 523
           L++  N + DEGAK + ++ 
Sbjct: 389 LNISNNNIGDEGAKYICEAL 408



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 177/358 (49%), Gaps = 42/358 (11%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
            E+K        E    + +D+S  N GDEG  ++ E+LG+                   
Sbjct: 83  EEAKYIGEALGHENCKLTQLDISYNNIGDEGAKYIGEALGH------------------- 123

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAI 266
                    N  L  L++S N IGDEG K +C+ L   N  + +L +S + + DEGAK I
Sbjct: 124 --------ENCKLTQLDISYNNIGDEGAKYICEALRHKNCKLTQLDISFIGMGDEGAKYI 175

Query: 267 AELLKN-NSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAK 324
            E L + N  L  L++  N I   G   + EAL  EN  +  L++ GN G   GA  + +
Sbjct: 176 GEALSHENCKLTQLDICLNNIGVGGAKYIGEALAHENCKLTKLNITGNIGNE-GAKYIGE 234

Query: 325 GL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
            L   N  L +L +    +GDEG + +   L     KL  L+IGNN+I  +GA ++ E +
Sbjct: 235 ALRHENCKLTQLDISFIGMGDEGAKYIGEALGHENCKLTQLNIGNNNIGDEGAKYIGEAL 294

Query: 384 --KNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVL- 439
             +NCK L  +++  N IG  GA+ I +AL  +N  +T +++ G NI ++GA  I   L 
Sbjct: 295 SHENCK-LTRLDISFN-IGVGGAKYIGEALAHENCKLTKLNITG-NIGNEGAKYIGEALA 351

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADML 495
            +N  +T L+++ N IG +GAK + E L  H N  +  L +    IG  GA+++ + L
Sbjct: 352 HENCKLTMLNISDNNIGDEGAKYIGEALS-HENCKLTQLNISNNNIGDEGAKYICEAL 408



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 95/165 (57%), Gaps = 7/165 (4%)

Query: 407 IADAL-KQNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYNPIGADGAKALS 464
           I +AL  +N  +T +D+  NNI  +GA  I   L  +N  +T LD++ N IG +GAK + 
Sbjct: 1   IGEALGHENCKLTQLDISFNNIGEEGAKYIGEALAHENCKLTQLDISLNNIGEEGAKYIG 60

Query: 465 EVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDEGAKCLAQ 521
           E L  H N  +  L +    IG   A+++ + L + N  ++ LD+  N + DEGAK + +
Sbjct: 61  EALG-HENCKLTQLDISLNNIGEEEAKYIGEALGHENCKLTQLDISYNNIGDEGAKYIGE 119

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
           +    N  LT +D+++N I D+GA  I +AL+ +++  +T L+++
Sbjct: 120 ALGHENCKLTQLDISYNNIGDEGAKYICEALR-HKNCKLTQLDIS 163


>gi|320164173|gb|EFW41072.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 295

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/282 (37%), Positives = 149/282 (52%), Gaps = 8/282 (2%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L    ID     ++AEAL  N T++ L L  N  G +GA A+A+ L  NK L  L+L 
Sbjct: 20  LYLGGRQIDADEVQAIAEALQVNQTLKELSLYHNQIGDVGALAIAQALSVNKKLTTLNLG 79

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IG  G +AL   +S+    LA L +  N I   GA  +A  +K   SL ++NL+ N 
Sbjct: 80  DNQIGSAGAQALSQAIST----LARLYLHENQIDNDGALAIANALKVSNSLTFLNLHQNQ 135

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IG+ GA+ +A+AL  N+ +T I L GN I   GA AI   LK N  +  L L  N IG  
Sbjct: 136 IGNAGAQALAEALSVNKALTDIHLSGNQIGDDGARAIGEALKVNKALAVLGLGSNQIGDA 195

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA+A+ E    +  +  L L   +IG +GA  +   L+ + T++ L L  N +   GA  
Sbjct: 196 GAQAIGEA---NPKLIVLSLRQNKIGDAGAHALGRALQASKTLTGLILEENFIGVAGALA 252

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           LA++ KV  + LT + L  N + D GA AI +A K N+ + V
Sbjct: 253 LAEAIKVT-KTLTRLVLISNPVGDVGAQAIDEARKVNKSLTV 293



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/284 (34%), Positives = 163/284 (57%), Gaps = 10/284 (3%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           ++++T  +L+L G    A    A+A+ L+ N++L+EL L+ N IGD G  A+   LS  K
Sbjct: 12  VKSATNGTLYLGGRQIDADEVQAIAEALQVNQTLKELSLYHNQIGDVGALAIAQALSVNK 71

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL  L++G+N I + GA  +++ I    +L  + L+ N I ++GA  IA+ALK + ++T
Sbjct: 72  -KLTTLNLGDNQIGSAGAQALSQAI---STLARLYLHENQIDNDGALAIANALKVSNSLT 127

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            ++L  N I + GA A+A  L  N  +T + L+ N IG DGA+A+ E LK +  +  L L
Sbjct: 128 FLNLHQNQIGNAGAQALAEALSVNKALTDIHLSGNQIGDDGARAIGEALKVNKALAVLGL 187

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
           G  QIG +GA+ + +    N  + +L LR N + D GA  L ++ +  ++ LT + L  N
Sbjct: 188 GSNQIGDAGAQAIGE---ANPKLIVLSLRQNKIGDAGAHALGRALQ-ASKTLTGLILEEN 243

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAK 582
            I   GA A+A+A+K  +   +T L L +N +   G  A+ +A+
Sbjct: 244 FIGVAGALALAEAIKVTK--TLTRLVLISNPVGDVGAQAIDEAR 285



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/275 (37%), Positives = 149/275 (54%), Gaps = 7/275 (2%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I A  ++A    LQ N  LK L+L  N IGD G   +   L  N  +  L L    +   
Sbjct: 27  IDADEVQAIAEALQVNQTLKELSLYHNQIGDVGALAIAQALSVNKKLTTLNLGDNQIGSA 86

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+A+++ +   S L  L L+ N ID  G  ++A AL  ++++  L+L+ N  G  GA A
Sbjct: 87  GAQALSQAI---STLARLYLHENQIDNDGALAIANALKVSNSLTFLNLHQNQIGNAGAQA 143

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           LA+ L  NK+L ++HL GN IGD+G RA+   L   K  LAVL +G+N I   GA  + E
Sbjct: 144 LAEALSVNKALTDIHLSGNQIGDDGARAIGEALKVNKA-LAVLGLGSNQIGDAGAQAIGE 202

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
              N K L+ ++L  N IGD GA  +  AL+ ++T+T + L  N I   GA A+A  +K 
Sbjct: 203 --ANPK-LIVLSLRQNKIGDAGAHALGRALQASKTLTGLILEENFIGVAGALALAEAIKV 259

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              +T L L  NP+G  GA+A+ E  K + ++  L
Sbjct: 260 TKTLTRLVLISNPVGDVGAQAIDEARKVNKSLTVL 294



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 28/202 (13%)

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           T+ LGG  I +    AIA  L+ N  +  L L +N IG  GA A+++ L  +  + TL L
Sbjct: 19  TLYLGGRQIDADEVQAIAEALQVNQTLKELSLYHNQIGDVGALAIAQALSVNKKLTTLNL 78

Query: 479 GWCQIGASGAE-------------------------FVADMLRYNNTISILDLRANGLRD 513
           G  QIG++GA+                          +A+ L+ +N+++ L+L  N + +
Sbjct: 79  GDNQIGSAGAQALSQAISTLARLYLHENQIDNDGALAIANALKVSNSLTFLNLHQNQIGN 138

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA+ LA++   VN+ALT I L+ N+I DDGA AI +ALK N+ +AV  L L +N +   
Sbjct: 139 AGAQALAEALS-VNKALTDIHLSGNQIGDDGARAIGEALKVNKALAV--LGLGSNQIGDA 195

Query: 574 GQSALTDAKDLVYEMSEKEVNI 595
           G  A+ +A   +  +S ++  I
Sbjct: 196 GAQAIGEANPKLIVLSLRQNKI 217



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 76/184 (41%), Gaps = 31/184 (16%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L E     +A + + +SG   GD+G   + E+L  N+                     
Sbjct: 142 QALAEALSVNKALTDIHLSGNQIGDDGARAIGEALKVNK--------------------- 180

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
                  AL  L L  N IGD G + + +    N  +  L L    + D GA A+   L+
Sbjct: 181 -------ALAVLGLGSNQIGDAGAQAIGEA---NPKLIVLSLRQNKIGDAGAHALGRALQ 230

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +  L  L L  N I  +G  +LAEA+    T+  L L  N  G +GA A+ +  + NKS
Sbjct: 231 ASKTLTGLILEENFIGVAGALALAEAIKVTKTLTRLVLISNPVGDVGAQAIDEARKVNKS 290

Query: 332 LREL 335
           L  L
Sbjct: 291 LTVL 294


>gi|320170755|gb|EFW47654.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 749

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 156/299 (52%), Gaps = 11/299 (3%)

Query: 202 ITAAGIKAFDGV-----LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
           +T +GI   D +     L+ N  L+ LNL  N IGD G + +   L +   +  L LS  
Sbjct: 24  LTYSGITDDDALVIANGLEENNNLQWLNLQNNQIGDIGAQAIGSALRNKPALVALNLSQN 83

Query: 257 DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
            + D GA  IAE L+ +++L  L ++ N I   G T++  AL + + +  L +     G 
Sbjct: 84  KIGDAGAVPIAEGLQTSTVLNELNMHTNQIGDEGATAIGCALRDKAHLSVLRI-----GD 138

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
           +GA A+A+GL  +  L +L +H N +GD G RA+ S L   K  L+VL +GNN IS  GA
Sbjct: 139 IGACAIAEGLRTSPGLTKLWMHANQVGDAGARAIGSALRD-KANLSVLHLGNNKISDIGA 197

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             +AE ++   +L  + ++ N IGD GA+ I  AL+    ++ + L  N I   GA AIA
Sbjct: 198 GAIAEGLQASTALNELGMHTNRIGDAGAQAIGSALRNKAYLSVLGLNNNKIGDTGACAIA 257

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
             L+ ++ +    +  N IG  GA+A+   L    +++ L L   QI +S  + ++  L
Sbjct: 258 EGLQASTALAEFGMDTNQIGDAGAQAIGSALCNKAHLSKLILSDNQISSSAVQLLSQNL 316



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 159/306 (51%), Gaps = 9/306 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           R+ L+   + D+ A  IA  L+ N+ L+ L L NN I   G  ++  AL     + +L+L
Sbjct: 21  RVILTYSGITDDDALVIANGLEENNNLQWLNLQNNQIGDIGAQAIGSALRNKPALVALNL 80

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N  G  GA  +A+GL+ +  L EL++H N IGDEG  A+   L   K  L+VL IG+ 
Sbjct: 81  SQNKIGDAGAVPIAEGLQTSTVLNELNMHTNQIGDEGATAIGCALRD-KAHLSVLRIGD- 138

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
                GA  +AE ++    L  + ++ N +GD GA  I  AL+    ++ + LG N I  
Sbjct: 139 ----IGACAIAEGLRTSPGLTKLWMHANQVGDAGARAIGSALRDKANLSVLHLGNNKISD 194

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA AIA  L+ ++ +  L +  N IG  GA+A+   L+    ++ L L   +IG +GA 
Sbjct: 195 IGAGAIAEGLQASTALNELGMHTNRIGDAGAQAIGSALRNKAYLSVLGLNNNKIGDTGAC 254

Query: 490 FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA-LTSIDLAFNEIRDDGAFAI 548
            +A+ L+ +  ++   +  N + D GA+ +  +    N+A L+ + L+ N+I       +
Sbjct: 255 AIAEGLQASTALAEFGMDTNQIGDAGAQAIGSAL--CNKAHLSKLILSDNQISSSAVQLL 312

Query: 549 AQALKA 554
           +Q L A
Sbjct: 313 SQNLPA 318



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 121/299 (40%), Gaps = 41/299 (13%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A  ++++S    GD G   +AE L  +    E++   N I   G  A    L+    L  
Sbjct: 74  ALVALNLSQNKIGDAGAVPIAEGLQTSTVLNELNMHTNQIGDEGATAIGCALRDKAHLSV 133

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L      IGD G   + + L  + G+ +L + +  + D GA+AI   L++ + L VL L 
Sbjct: 134 LR-----IGDIGACAIAEGLRTSPGLTKLWMHANQVGDAGARAIGSALRDKANLSVLHLG 188

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           NN I   G  ++AE L  ++ +  L ++ N  G  GA A+   L     L  L L+ N I
Sbjct: 189 NNKISDIGAGAIAEGLQASTALNELGMHTNRIGDAGAQAIGSALRNKAYLSVLGLNNNKI 248

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD                              GA  +AE ++   +L    +  N IGD 
Sbjct: 249 GD-----------------------------TGACAIAEGLQASTALAEFGMDTNQIGDA 279

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK-------DNSVITSLDLAYNP 454
           GA+ I  AL     ++ + L  N I S     +++ L        DN  I   D   +P
Sbjct: 280 GAQAIGSALCNKAHLSKLILSDNQISSSAVQLLSQNLPAKCEFSADNQRIRVQDANISP 338



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 8/187 (4%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  + I D+ A  IA+ L++N  +  ++L  N I   GA AI   L++   + +L+L+ N
Sbjct: 24  LTYSGITDDDALVIANGLEENNNLQWLNLQNNQIGDIGAQAIGSALRNKPALVALNLSQN 83

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA  ++E L+    +N L +   QIG  GA  +   LR    +S+L      + D
Sbjct: 84  KIGDAGAVPIAEGLQTSTVLNELNMHTNQIGDEGATAIGCALRDKAHLSVLR-----IGD 138

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA  +A+  +  +  LT + +  N++ D GA AI  AL+   +++V  L+L NN ++  
Sbjct: 139 IGACAIAEGLR-TSPGLTKLWMHANQVGDAGARAIGSALRDKANLSV--LHLGNNKISDI 195

Query: 574 GQSALTD 580
           G  A+ +
Sbjct: 196 GAGAIAE 202


>gi|320163012|gb|EFW39911.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 353

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 121/352 (34%), Positives = 178/352 (50%), Gaps = 40/352 (11%)

Query: 241 ILVDNAGV-ERL------------QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           +LVDN+ + ERL            +LS+  + D  A+AIAE LK N  +  +   N M D
Sbjct: 1   MLVDNSQLAERLRKLHDKIKNTSGELSASWIGDAEAQAIAETLKENKTVTTIYFENRMGD 60

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
            +G  ++AE L  N T+ +L+L+ N  G  GA A+A+ L  NK+L  L+L  N IGD G 
Sbjct: 61  -AGAQAIAEVLKVNKTLTALYLDRNQIGDAGAQAIAEALTVNKTLTTLYLDWNQIGDAGA 119

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
           +A+   L   K  L +L +  N I   GA+ +AE +K   +L  ++L  N IGD GA+ I
Sbjct: 120 QAIAEALKENK-TLTLLSLSENRIGDDGAWAIAEVLKVNTTLKKLHLNRNQIGDAGAQAI 178

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLK------DNSVITSLD------------ 449
           A+AL  N T++ I L GN     G   +  V K      ++ +  S+             
Sbjct: 179 AEALNVNTTLSMIGLDGNRFSLSGVLILKAVCKKRWLHLEDVLQQSMTPRQLGLYDHVKN 238

Query: 450 ------LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
                 L+ N IG   A A++E LK +  +  L L   QIG +GA+ +A+ L+ N T++ 
Sbjct: 239 GNGAVVLSGNQIGIAEALAIAEALKVNTTLTMLFLQVNQIGDAGAQAIAEALKENKTLAQ 298

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           LDL  N + D GA  +A++ K VN  L  + L  N I   G  A+  A KAN
Sbjct: 299 LDLHMNQIGDVGAHAIAEALK-VNTTLIQLLLDGNSISHSGVTALKAACKAN 349



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 169/338 (50%), Gaps = 12/338 (3%)

Query: 156 EFAKELRAF------SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           + A+ LR        +S ++S    GD     +AE+L  N+T   + F  N +  AG +A
Sbjct: 7   QLAERLRKLHDKIKNTSGELSASWIGDAEAQAIAETLKENKTVTTIYFE-NRMGDAGAQA 65

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
              VL+ N  L  L L  N IGD G + + + L  N  +  L L    + D GA+AIAE 
Sbjct: 66  IAEVLKVNKTLTALYLDRNQIGDAGAQAIAEALTVNKTLTTLYLDWNQIGDAGAQAIAEA 125

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           LK N  L +L L+ N I   G  ++AE L  N+T++ LHLN N  G  GA A+A+ L  N
Sbjct: 126 LKENKTLTLLSLSENRIGDDGAWAIAEVLKVNTTLKKLHLNRNQIGDAGAQAIAEALNVN 185

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +L  + L GN     G+  L +    +K  L + D+   S++ +    + +++KN    
Sbjct: 186 TTLSMIGLDGNRFSLSGVLILKA--VCKKRWLHLEDVLQQSMTPR-QLGLYDHVKNGNGA 242

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L  N IG   A  IA+ALK N T+T + L  N I   GA AIA  LK+N  +  LD
Sbjct: 243 --VVLSGNQIGIAEALAIAEALKVNTTLTMLFLQVNQIGDAGAQAIAEALKENKTLAQLD 300

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
           L  N IG  GA A++E LK +  +  L L    I  SG
Sbjct: 301 LHMNQIGDVGAHAIAEALKVNTTLIQLLLDGNSISHSG 338



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 142/310 (45%), Gaps = 64/310 (20%)

Query: 332 LRELH---------LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           LR+LH         L  + IGD   +A+   L   K    +     N +   GA  +AE 
Sbjct: 12  LRKLHDKIKNTSGELSASWIGDAEAQAIAETLKENKTVTTIY--FENRMGDAGAQAIAEV 69

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K  K+L  + L  N IGD GA+ IA+AL  N+T+TT+ L  N I   GA AIA  LK+N
Sbjct: 70  LKVNKTLTALYLDRNQIGDAGAQAIAEALTVNKTLTTLYLDWNQIGDAGAQAIAEALKEN 129

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +T L L+ N IG DGA A++EVLK +  +  L L   QIG +GA+ +A+ L  N T+S
Sbjct: 130 KTLTLLSLSENRIGDDGAWAIAEVLKVNTTLKKLHLNRNQIGDAGAQAIAEALNVNTTLS 189

Query: 503 ILDLRAN----------------------------------GLRDE-----GAKCLA--- 520
           ++ L  N                                  GL D      GA  L+   
Sbjct: 190 MIGLDGNRFSLSGVLILKAVCKKRWLHLEDVLQQSMTPRQLGLYDHVKNGNGAVVLSGNQ 249

Query: 521 ---------QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
                         VN  LT + L  N+I D GA AIA+ALK N+ +A   L+L  N + 
Sbjct: 250 IGIAEALAIAEALKVNTTLTMLFLQVNQIGDAGAQAIAEALKENKTLA--QLDLHMNQIG 307

Query: 572 KFGQSALTDA 581
             G  A+ +A
Sbjct: 308 DVGAHAIAEA 317



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 146/325 (44%), Gaps = 53/325 (16%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           F  ++     Q + E  K  +  +++ +     GD G   +AE+L  N+T   +    N 
Sbjct: 54  FENRMGDAGAQAIAEVLKVNKTLTALYLDRNQIGDAGAQAIAEALTVNKTLTTLYLDWNQ 113

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I  AG +A    L+ N  L  L+LS N IGD+G   + ++L  N  +++L L+   + D 
Sbjct: 114 IGDAGAQAIAEALKENKTLTLLSLSENRIGDDGAWAIAEVLKVNTTLKKLHLNRNQIGDA 173

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSG-----------FTSLAEALLENSTIRSLHL- 309
           GA+AIAE L  N+ L ++ L+ N    SG           +  L + L ++ T R L L 
Sbjct: 174 GAQAIAEALNVNTTLSMIGLDGNRFSLSGVLILKAVCKKRWLHLEDVLQQSMTPRQLGLY 233

Query: 310 ----NGNYGGALGANALA--------KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
               NGN    L  N +         + L+ N +L  L L  N IGD G +A        
Sbjct: 234 DHVKNGNGAVVLSGNQIGIAEALAIAEALKVNTTLTMLFLQVNQIGDAGAQA-------- 285

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
                                +AE +K  K+L  ++L+MN IGD GA  IA+ALK N T+
Sbjct: 286 ---------------------IAEALKENKTLAQLDLHMNQIGDVGAHAIAEALKVNTTL 324

Query: 418 TTIDLGGNNIHSKGASAIARVLKDN 442
             + L GN+I   G +A+    K N
Sbjct: 325 IQLLLDGNSISHSGVTALKAACKAN 349



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 80/183 (43%), Gaps = 24/183 (13%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI---KA--------FDGVLQSNIALKT 222
            GD G   +AE+L  N T   +    N  + +G+   KA         + VLQ ++  + 
Sbjct: 170 IGDAGAQAIAEALNVNTTLSMIGLDGNRFSLSGVLILKAVCKKRWLHLEDVLQQSMTPRQ 229

Query: 223 LN-------------LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           L              LSGN IG      + + L  N  +  L L    + D GA+AIAE 
Sbjct: 230 LGLYDHVKNGNGAVVLSGNQIGIAEALAIAEALKVNTTLTMLFLQVNQIGDAGAQAIAEA 289

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           LK N  L  L+L+ N I   G  ++AEAL  N+T+  L L+GN     G  AL    + N
Sbjct: 290 LKENKTLAQLDLHMNQIGDVGAHAIAEALKVNTTLIQLLLDGNSISHSGVTALKAACKAN 349

Query: 330 KSL 332
             L
Sbjct: 350 CQL 352


>gi|320164804|gb|EFW41703.1| hypothetical protein CAOG_06835 [Capsaspora owczarzaki ATCC 30864]
          Length = 1217

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 137/239 (57%), Gaps = 6/239 (2%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L LS   IGD   + + + L  N  + +L L S  + D GAKAIAE LK N+ L  L L+
Sbjct: 26  LLLSWCKIGDVEAQAIAEALEVNTTLIKLNLLSGQIGDAGAKAIAEALKVNTTLTQLHLS 85

Query: 283 -----NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
                NN I   G  +LAEAL  N+T+  L L+GN  G +GA A+A+ LE N +L +L L
Sbjct: 86  TIQLFNNQIGDVGAQALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEVNTTLTKLIL 145

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             N +GD G  ++   L  +   L  L + +N I   GA  ++E ++   +L  +NL++N
Sbjct: 146 SDNQVGDAGALSISKAL-QKNTILQNLSLASNQIGDAGALSISEALQKNTTLQILNLWLN 204

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
            IGD GA  +++AL++N T+  ++L  N I + GA +I+  L+ N+ + +L+L +N IG
Sbjct: 205 QIGDAGALSLSEALQKNTTLQNLNLWLNQIGNAGALSISEALQKNTTLQNLNLEFNQIG 263



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/247 (36%), Positives = 139/247 (56%), Gaps = 7/247 (2%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V NA  E L LS   + D  A+AIAE L+ N+ L  L L +  I  +G  ++AEAL  N+
Sbjct: 19  VKNASGELL-LSWCKIGDVEAQAIAEALEVNTTLIKLNLLSGQIGDAGAKAIAEALKVNT 77

Query: 303 TIRSLHLN-----GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           T+  LHL+      N  G +GA ALA+ LE N +L +L LHGN IG+ G +A+   L   
Sbjct: 78  TLTQLHLSTIQLFNNQIGDVGAQALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEV- 136

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
              L  L + +N +   GA  +++ ++    L  ++L  N IGD GA  I++AL++N T+
Sbjct: 137 NTTLTKLILSDNQVGDAGALSISKALQKNTILQNLSLASNQIGDAGALSISEALQKNTTL 196

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
             ++L  N I   GA +++  L+ N+ + +L+L  N IG  GA ++SE L+ +  +  L 
Sbjct: 197 QILNLWLNQIGDAGALSLSEALQKNTTLQNLNLWLNQIGNAGALSISEALQKNTTLQNLN 256

Query: 478 LGWCQIG 484
           L + QIG
Sbjct: 257 LEFNQIG 263



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 135/230 (58%), Gaps = 5/230 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL----SSRKGKLAVLDIGNNS 370
           G + A A+A+ LE N +L +L+L    IGD G +A+   L    +  +  L+ + + NN 
Sbjct: 34  GDVEAQAIAEALEVNTTLIKLNLLSGQIGDAGAKAIAEALKVNTTLTQLHLSTIQLFNNQ 93

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I   GA  +AE ++   +L  ++L+ N IG+ GA+ IA+AL+ N T+T + L  N +   
Sbjct: 94  IGDVGAQALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEVNTTLTKLILSDNQVGDA 153

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA +I++ L+ N+++ +L LA N IG  GA ++SE L+ +  +  L L   QIG +GA  
Sbjct: 154 GALSISKALQKNTILQNLSLASNQIGDAGALSISEALQKNTTLQILNLWLNQIGDAGALS 213

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
           +++ L+ N T+  L+L  N + + GA  ++++ +  N  L +++L FN+I
Sbjct: 214 LSEALQKNTTLQNLNLWLNQIGNAGALSISEALQ-KNTTLQNLNLEFNQI 262



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 131/264 (49%), Gaps = 34/264 (12%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GD     +AE+L  N T                            L  LNL   
Sbjct: 28  LSWCKIGDVEAQAIAEALEVNTT----------------------------LIKLNLLSG 59

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNSILRVLELNN 283
            IGD G K + + L  N  + +L LS++ L      D GA+A+AE L+ N+ L  L+L+ 
Sbjct: 60  QIGDAGAKAIAEALKVNTTLTQLHLSTIQLFNNQIGDVGAQALAEALEVNTTLTQLDLHG 119

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  ++AEAL  N+T+  L L+ N  G  GA +++K L+ N  L+ L L  N IG
Sbjct: 120 NQIGEVGAQAIAEALEVNTTLTKLILSDNQVGDAGALSISKALQKNTILQNLSLASNQIG 179

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G  ++   L  +   L +L++  N I   GA  ++E ++   +L  +NL++N IG+ G
Sbjct: 180 DAGALSISEAL-QKNTTLQILNLWLNQIGDAGALSLSEALQKNTTLQNLNLWLNQIGNAG 238

Query: 404 AEKIADALKQNRTITTIDLGGNNI 427
           A  I++AL++N T+  ++L  N I
Sbjct: 239 ALSISEALQKNTTLQNLNLEFNQI 262



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 99/180 (55%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S++ +     GD G   LAE+L  N T  ++    N I   G +A    L+ N  L  L
Sbjct: 84  LSTIQLFNNQIGDVGAQALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEVNTTLTKL 143

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            LS N +GD G   +   L  N  ++ L L+S  + D GA +I+E L+ N+ L++L L  
Sbjct: 144 ILSDNQVGDAGALSISKALQKNTILQNLSLASNQIGDAGALSISEALQKNTTLQILNLWL 203

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  SL+EAL +N+T+++L+L  N  G  GA ++++ L+ N +L+ L+L  N IG
Sbjct: 204 NQIGDAGALSLSEALQKNTTLQNLNLWLNQIGNAGALSISEALQKNTTLQNLNLEFNQIG 263



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 12/205 (5%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY-----N 453
           IGD  A+ IA+AL+ N T+  ++L    I   GA AIA  LK N+ +T L L+      N
Sbjct: 33  IGDVEAQAIAEALEVNTTLIKLNLLSGQIGDAGAKAIAEALKVNTTLTQLHLSTIQLFNN 92

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+AL+E L+ +  +  L L   QIG  GA+ +A+ L  N T++ L L  N + D
Sbjct: 93  QIGDVGAQALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEVNTTLTKLILSDNQVGD 152

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA  ++++ +  N  L ++ LA N+I D GA +I++AL+ N     T+L + N +L + 
Sbjct: 153 AGALSISKALQ-KNTILQNLSLASNQIGDAGALSISEALQKN-----TTLQILNLWLNQI 206

Query: 574 GQS-ALTDAKDLVYEMSEKEVNIFF 597
           G + AL+ ++ L    + + +N++ 
Sbjct: 207 GDAGALSLSEALQKNTTLQNLNLWL 231



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 1/211 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+ G   G+ G   +AE+L  N T  ++  + N +  AG  +    LQ N  L+ L
Sbjct: 112 LTQLDLHGNQIGEVGAQAIAEALEVNTTLTKLILSDNQVGDAGALSISKALQKNTILQNL 171

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+ N IGD G   + + L  N  ++ L L    + D GA +++E L+ N+ L+ L L  
Sbjct: 172 SLASNQIGDAGALSISEALQKNTTLQILNLWLNQIGDAGALSLSEALQKNTTLQNLNLWL 231

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  S++EAL +N+T+++L+L  N  G +    L   + G+ S+ +  L    I 
Sbjct: 232 NQIGNAGALSISEALQKNTTLQNLNLEFNQIGYVEETVLRHIVLGDPSVGKTSL-VRGIA 290

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           D  +R   S + S       +DI    + AK
Sbjct: 291 DGYVRQAFSNMFSIANSTDGIDISTVILRAK 321



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 6/110 (5%)

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV----VNEALT 531
           L L WC+IG   A+ +A+ L  N T+  L+L +  + D GAK +A++ KV        L+
Sbjct: 26  LLLSWCKIGDVEAQAIAEALEVNTTLIKLNLLSGQIGDAGAKAIAEALKVNTTLTQLHLS 85

Query: 532 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           +I L  N+I D GA A+A+AL+ N    +T L+L  N + + G  A+ +A
Sbjct: 86  TIQLFNNQIGDVGAQALAEALEVN--TTLTQLDLHGNQIGEVGAQAIAEA 133


>gi|320170781|gb|EFW47680.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 452

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 149/278 (53%), Gaps = 16/278 (5%)

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           + + + +KNN+  R LEL+ +  D +   ++AEAL  N T+  + L  N  G +GA A+A
Sbjct: 12  RQLYDQVKNNTTGR-LELDGSQTDDADMQAIAEALKVNETVTHISLRNNRVGPVGAQAIA 70

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS---AKGAFHVA 380
           + L+  K++  L+L+ N++ D G++A+   L             N+S++   A GA  + 
Sbjct: 71  QVLKVTKTIAVLNLNSNTVQDAGVQAIAEALKV-----------NDSLTELFAAGAHAIG 119

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           E +K   +LLW+ L  N IGD GA+ IA+AL  N  +  + L  N I + GA AIA  LK
Sbjct: 120 EALKVNNTLLWLGLDANQIGDAGAQAIAEALHANTRLKVLVLFANQIGNAGAQAIAEALK 179

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            NS +  L L  N IG  GA+A++E LK +  +  L+L + QIG  G   +A+ L+ N  
Sbjct: 180 VNSTLKKLYLEMNQIGDAGAQAVAEGLKMNQKLARLRLDYNQIGTVGVRALAEALKVNTK 239

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
           +  L L  N +   G + +  + + VN  L+ +D  + 
Sbjct: 240 LQGLWLTFNCIDYAGTRAI-HAVRQVNPNLSQLDTNYQ 276



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 9/227 (3%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +   L L G+   D  ++A+   L   +  +  + + NN +   GA  +A+ +K  K+
Sbjct: 20  NNTTGRLELDGSQTDDADMQAIAEALKVNE-TVTHISLRNNRVGPVGAQAIAQVLKVTKT 78

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           +  +NL  N + D G + IA+ALK N ++T        + + GA AI   LK N+ +  L
Sbjct: 79  IAVLNLNSNTVQDAGVQAIAEALKVNDSLT-------ELFAAGAHAIGEALKVNNTLLWL 131

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L  N IG  GA+A++E L  +  +  L L   QIG +GA+ +A+ L+ N+T+  L L  
Sbjct: 132 GLDANQIGDAGAQAIAEALHANTRLKVLVLFANQIGNAGAQAIAEALKVNSTLKKLYLEM 191

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           N + D GA+ +A+  K+ N+ L  + L +N+I   G  A+A+ALK N
Sbjct: 192 NQIGDAGAQAVAEGLKM-NQKLARLRLDYNQIGTVGVRALAEALKVN 237



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 36/287 (12%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++ G    D  +  +AE+L  N+T   +S   N +   G +A   VL+    +  LNL+
Sbjct: 26  LELDGSQTDDADMQAIAEALKVNETVTHISLRNNRVGPVGAQAIAQVLKVTKTIAVLNLN 85

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N + D GV+ + + L       ++  S  +L   GA AI E LK N+ L  L L+ N I
Sbjct: 86  SNTVQDAGVQAIAEAL-------KVNDSLTELFAAGAHAIGEALKVNNTLLWLGLDANQI 138

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             +G  ++AEAL  N+ ++ L L  N  G  GA A+A+ L+ N +L++L+L  N IGD G
Sbjct: 139 GDAGAQAIAEALHANTRLKVLVLFANQIGNAGAQAIAEALKVNSTLKKLYLEMNQIGDAG 198

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            +A                             VAE +K  + L  + L  N IG  G   
Sbjct: 199 AQA-----------------------------VAEGLKMNQKLARLRLDYNQIGTVGVRA 229

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +A+ALK N  +  + L  N I   G  AI  V + N  ++ LD  Y 
Sbjct: 230 LAEALKVNTKLQGLWLTFNCIDYAGTRAIHAVRQVNPNLSQLDTNYQ 276



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 10/203 (4%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +K  +++  I+L  N +G  GA+ IA  LK  +TI  ++L  N +   G  AIA  
Sbjct: 41  IAEALKVNETVTHISLRNNRVGPVGAQAIAQVLKVTKTIAVLNLNSNTVQDAGVQAIAEA 100

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK N  +T L        A GA A+ E LK +  +  L L   QIG +GA+ +A+ L  N
Sbjct: 101 LKVNDSLTEL-------FAAGAHAIGEALKVNNTLLWLGLDANQIGDAGAQAIAEALHAN 153

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
             + +L L AN + + GA+ +A++ KV N  L  + L  N+I D GA A+A+ LK N+ +
Sbjct: 154 TRLKVLVLFANQIGNAGAQAIAEALKV-NSTLKKLYLEMNQIGDAGAQAVAEGLKMNQKL 212

Query: 559 AVTSLNLANNFLTKFGQSALTDA 581
           A   L L  N +   G  AL +A
Sbjct: 213 A--RLRLDYNQIGTVGVRALAEA 233



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 99/199 (49%), Gaps = 7/199 (3%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + +  K  +  + ++++     D G+  +AE+L  N +  E       + AAG  A  
Sbjct: 67  QAIAQVLKVTKTIAVLNLNSNTVQDAGVQAIAEALKVNDSLTE-------LFAAGAHAIG 119

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L L  N IGD G + + + L  N  ++ L L +  + + GA+AIAE LK
Sbjct: 120 EALKVNNTLLWLGLDANQIGDAGAQAIAEALHANTRLKVLVLFANQIGNAGAQAIAEALK 179

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS L+ L L  N I  +G  ++AE L  N  +  L L+ N  G +G  ALA+ L+ N  
Sbjct: 180 VNSTLKKLYLEMNQIGDAGAQAVAEGLKMNQKLARLRLDYNQIGTVGVRALAEALKVNTK 239

Query: 332 LRELHLHGNSIGDEGIRAL 350
           L+ L L  N I   G RA+
Sbjct: 240 LQGLWLTFNCIDYAGTRAI 258



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 3/84 (3%)

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
           NNT   L+L  +   D   + +A++ KV NE +T I L  N +   GA AIAQ LK  + 
Sbjct: 20  NNTTGRLELDGSQTDDADMQAIAEALKV-NETVTHISLRNNRVGPVGAQAIAQVLKVTKT 78

Query: 558 VAVTSLNLANNFLTKFGQSALTDA 581
           +AV  LNL +N +   G  A+ +A
Sbjct: 79  IAV--LNLNSNTVQDAGVQAIAEA 100


>gi|189502473|ref|YP_001958190.1| hypothetical protein Aasi_1120 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497914|gb|ACE06461.1| hypothetical protein Aasi_1120 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 781

 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 208/409 (50%), Gaps = 17/409 (4%)

Query: 150 SKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           S Q   EF K L+      V++S    G +G    A+ L   +    V+ + N I   G 
Sbjct: 304 SDQGAEEFGKHLQGTNVHMVNLSNNQIGAQGAEGFAKHLKRTKV-HAVNLSFNNIGNQGA 362

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           + F   L+    + T+NLSGN IG++G +     L +   V  + LS  ++ D+GA+   
Sbjct: 363 EEFGKHLKE-TRVHTVNLSGNEIGNQGAEEFGKHLQETQ-VHTVDLSGNEIDDQGAEGFT 420

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           + L+   + + + L+ N I   G    A+ L E + + +++L+ N     GA   AK L+
Sbjct: 421 KHLQGTQV-QAVNLSFNNISDQGAEGFAKHLKE-TKVHTVNLSYNQISDQGAEGFAKHLQ 478

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
               +  + L GN IGD+GI      L      +  L +  N I  +GA    +++K  +
Sbjct: 479 -ETQVHTVDLSGNQIGDQGIEEFGKHLQGTN--VHTLVLSENQIDDQGAEEFGKHLKETR 535

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            +  ++L  N IGD+GAE  A  LK+ + + T++L GN I ++GA  +A+ L+   V T 
Sbjct: 536 -VHTVDLSKNYIGDQGAEGFAKYLKETQ-VHTVNLSGNQIGAEGAVGLAKNLQGTQVHT- 592

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           ++L+ N IGA GA+ L++ L+    ++TL L   +IGA  AE +A  L+    +  L L 
Sbjct: 593 VNLSGNVIGAQGAEGLAKHLQG-TKVHTLHLAGNRIGAQCAEALAKHLQ-GTKVHTLHLS 650

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            N +  +GA+  A+  +     + ++DL++N+I D GA A+A+ L+  +
Sbjct: 651 MNQIGAQGAEGFAKHLQ--GTQVHTVDLSYNQIGDQGAEALAKHLQGTQ 697



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 198/394 (50%), Gaps = 17/394 (4%)

Query: 152 QTLNEFAKELR--AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           Q   EF K L+     +VD+SG    D+G     + L   Q  + V+ + N I+  G + 
Sbjct: 387 QGAEEFGKHLQETQVHTVDLSGNEIDDQGAEGFTKHLQGTQV-QAVNLSFNNISDQGAEG 445

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F   L+    + T+NLS N I D+G +     L +   V  + LS   + D+G +   + 
Sbjct: 446 FAKHLKE-TKVHTVNLSYNQISDQGAEGFAKHLQETQ-VHTVDLSGNQIGDQGIEEFGKH 503

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           L+  ++   L L+ N ID  G     + L E + + ++ L+ NY G  GA   AK L+  
Sbjct: 504 LQGTNV-HTLVLSENQIDDQGAEEFGKHLKE-TRVHTVDLSKNYIGDQGAEGFAKYLK-E 560

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             +  ++L GN IG EG   L   L   +  +  +++  N I A+GA  +A++++  K +
Sbjct: 561 TQVHTVNLSGNQIGAEGAVGLAKNLQGTQ--VHTVNLSGNVIGAQGAEGLAKHLQGTK-V 617

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             ++L  N IG + AE +A  L Q   + T+ L  N I ++GA   A+ L+   V T +D
Sbjct: 618 HTLHLAGNRIGAQCAEALAKHL-QGTKVHTLHLSMNQIGAQGAEGFAKHLQGTQVHT-VD 675

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L+YN IG  GA+AL++ L+    ++T+ L    IGA GAE  A  L+    +  ++L  N
Sbjct: 676 LSYNQIGDQGAEALAKHLQG-TQMHTVILAGNHIGAQGAEEFAKHLQ-GTQVYTVNLSEN 733

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
            +  +GA+  A+  K  N  + +++L+FN I  D
Sbjct: 734 HIDGQGAEGFAKHLKGTN--VHTVNLSFNSIGAD 765



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 162/319 (50%), Gaps = 15/319 (4%)

Query: 150 SKQTLNEFAKELR--AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAG 206
           S Q    FAK L+     +VD+SG   GD+G+    + L G N     +  + N I   G
Sbjct: 466 SDQGAEGFAKHLQETQVHTVDLSGNQIGDQGIEEFGKHLQGTN--VHTLVLSENQIDDQG 523

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            + F   L+    + T++LS N IGD+G +     L +   V  + LS   +  EGA  +
Sbjct: 524 AEEFGKHLKE-TRVHTVDLSKNYIGDQGAEGFAKYLKETQ-VHTVNLSGNQIGAEGAVGL 581

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           A+ L+   +   + L+ N+I   G   LA+ L + + + +LHL GN  GA  A ALAK L
Sbjct: 582 AKNLQGTQV-HTVNLSGNVIGAQGAEGLAKHL-QGTKVHTLHLAGNRIGAQCAEALAKHL 639

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           +G K +  LHL  N IG +G       L     ++  +D+  N I  +GA  +A++++  
Sbjct: 640 QGTK-VHTLHLSMNQIGAQGAEGFAKHLQGT--QVHTVDLSYNQIGDQGAEALAKHLQGT 696

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           +    I L  N IG +GAE+ A  L Q   + T++L  N+I  +GA   A+ LK  +V T
Sbjct: 697 QMHTVI-LAGNHIGAQGAEEFAKHL-QGTQVYTVNLSENHIDGQGAEGFAKHLKGTNVHT 754

Query: 447 SLDLAYNPIGADGAKALSE 465
            ++L++N IGAD  K L +
Sbjct: 755 -VNLSFNSIGADIQKLLKD 772



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 37/260 (14%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L+ N I D+G       L      + ++++ NN I A+GA   A+++K  K +  +NL  
Sbjct: 298 LNENQISDQGAEEFGKHLQGTN--VHMVNLSNNQIGAQGAEGFAKHLKRTK-VHAVNLSF 354

Query: 397 NDIGDEGAEKIADALKQNRTIT--------------------------TIDLGGNNIHSK 430
           N+IG++GAE+    LK+ R  T                          T+DL GN I  +
Sbjct: 355 NNIGNQGAEEFGKHLKETRVHTVNLSGNEIGNQGAEEFGKHLQETQVHTVDLSGNEIDDQ 414

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA    + L+   V  +++L++N I   GA+  ++ LK    ++T+ L + QI   GAE 
Sbjct: 415 GAEGFTKHLQGTQV-QAVNLSFNNISDQGAEGFAKHLK-ETKVHTVNLSYNQISDQGAEG 472

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
            A  L+    +  +DL  N + D+G +   +  +  N  + ++ L+ N+I D GA    +
Sbjct: 473 FAKHLQ-ETQVHTVDLSGNQIGDQGIEEFGKHLQGTN--VHTLVLSENQIDDQGAEEFGK 529

Query: 551 ALKANEDVAVTSLNLANNFL 570
            LK   +  V +++L+ N++
Sbjct: 530 HLK---ETRVHTVDLSKNYI 546



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 33/188 (17%)

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSV--------------------------IT 446
           Q   + T+DL  N I  +GA    + L+  +V                          + 
Sbjct: 289 QGTNVHTVDLNENQISDQGAEEFGKHLQGTNVHMVNLSNNQIGAQGAEGFAKHLKRTKVH 348

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           +++L++N IG  GA+   + LK    ++T+ L   +IG  GAE     L+    +  +DL
Sbjct: 349 AVNLSFNNIGNQGAEEFGKHLK-ETRVHTVNLSGNEIGNQGAEEFGKHLQ-ETQVHTVDL 406

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
             N + D+GA+   +  +     + +++L+FN I D GA   A+ LK   +  V ++NL+
Sbjct: 407 SGNEIDDQGAEGFTKHLQ--GTQVQAVNLSFNNISDQGAEGFAKHLK---ETKVHTVNLS 461

Query: 567 NNFLTKFG 574
            N ++  G
Sbjct: 462 YNQISDQG 469


>gi|59891397|tpg|DAA05659.1| TPA_inf: caterpillar 16.2 [Mus musculus]
          Length = 1205

 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 110/321 (34%), Positives = 156/321 (48%), Gaps = 34/321 (10%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
           S+  L     +L    S+ +    F D  +  L   L G +    ++S A N I   G K
Sbjct: 652 SQHVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAK 711

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L  N +L TL+L  N IG  G K L D L  N  +  L L S  ++D+G   +AE
Sbjct: 712 ALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAE 771

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L +N  + +L+L  N+I   G   +A+AL +N ++++L  + N  G  GA ALA+ L+ 
Sbjct: 772 ALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKV 831

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N+ L  L L  NSI D G+  LM  L S           N ++S+               
Sbjct: 832 NQILENLDLQSNSISDMGVTVLMRALCS-----------NQTLSS--------------- 865

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              +NL  N IGDEGA  +A ALK N T+  + L GN++ + GA A+A  LK NS +  L
Sbjct: 866 ---LNLQENAIGDEGASSVAGALKVNTTLIALYLRGNDVGAAGAKALANALKLNSSLRRL 922

Query: 449 DLAYNPIGADG----AKALSE 465
           +L  N +G DG    A ALSE
Sbjct: 923 NLQENSLGMDGAIFVASALSE 943



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/280 (35%), Positives = 142/280 (50%), Gaps = 29/280 (10%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           ++ ++L+ N IG++G K L   L+ N  +  L L S  +   GAKA+A+ LK N  L  L
Sbjct: 695 IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSL 754

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L +N+I   G   +AEAL+ N TI  L L  N  G +GA  +A  L+ N+SL+ L    
Sbjct: 755 SLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSS 814

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N+IGD G  AL   L   +  L  LD+ +NSIS  G   +   + + ++L  +NL  N I
Sbjct: 815 NTIGDRGAIALAEALKVNQ-ILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLQENAI 873

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           GDEGA  +A ALK N T+  + L GN++ + GA A+A  LK NS +  L+L  N +G DG
Sbjct: 874 GDEGASSVAGALKVNTTLIALYLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDG 933

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           A                             FVA  L  N+
Sbjct: 934 A----------------------------IFVASALSENH 945



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 4/271 (1%)

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           M   S  T+LA  LL+ S I S     ++   L  + L   L      + L L  N   D
Sbjct: 622 MTSPSHRTALAY-LLQMSDICSP--EADFSLCLSQHVLQSLLPQLLYCQSLRLDNNQFQD 678

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
             +  L S LS +  ++  + +  N I  KGA  +A  +   +SL+ ++L  N IG  GA
Sbjct: 679 PVMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGA 738

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + +ADALK NRT+T++ L  N I   G   +A  L  N  I+ L L  N IG  GA+ ++
Sbjct: 739 KALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMA 798

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           + LK + ++  L      IG  GA  +A+ L+ N  +  LDL++N + D G   L ++  
Sbjct: 799 DALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRAL- 857

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             N+ L+S++L  N I D+GA ++A ALK N
Sbjct: 858 CSNQTLSSLNLQENAIGDEGASSVAGALKVN 888



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 138/281 (49%), Gaps = 30/281 (10%)

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           +R + L  N I   G  +LA +LL N ++ +L L  N  G  GA ALA  L+ N++L  L
Sbjct: 695 IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSL 754

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N I D+G+  +   L S +  +++L +  N I   GA  +A+ +K  +SL  +   
Sbjct: 755 SLQSNVIKDDGVMCVAEALVSNQ-TISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFS 813

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IGD GA  +A+ALK N+ +  +DL  N+I   G + + R L  N  ++SL+L  N I
Sbjct: 814 SNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLQENAI 873

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G +GA +                            VA  L+ N T+  L LR N +   G
Sbjct: 874 GDEGASS----------------------------VAGALKVNTTLIALYLRGNDVGAAG 905

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           AK LA + K +N +L  ++L  N +  DGA  +A AL  N 
Sbjct: 906 AKALANALK-LNSSLRRLNLQENSLGMDGAIFVASALSENH 945



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 1/249 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + ++    G++G   LA SL  N++   +   +N I   G KA    L+ N  L +L+L 
Sbjct: 698 ISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQ 757

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I D+GV C+ + LV N  +  LQL    +   GA+ +A+ LK N  L+ L  ++N I
Sbjct: 758 SNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTI 817

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  +LAEAL  N  + +L L  N    +G   L + L  N++L  L+L  N+IGDEG
Sbjct: 818 GDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLQENAIGDEG 877

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             ++   L      +A+   GN+ + A GA  +A  +K   SL  +NL  N +G +GA  
Sbjct: 878 ASSVAGALKVNTTLIALYLRGND-VGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIF 936

Query: 407 IADALKQNR 415
           +A AL +N 
Sbjct: 937 VASALSENH 945



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 141/266 (53%), Gaps = 8/266 (3%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           +R++ L  N IG++G +AL   L   +  L  LD+ +NSI   GA  +A+ +K  ++L  
Sbjct: 695 IRKISLAENQIGNKGAKALARSLLVNR-SLITLDLRSNSIGPPGAKALADALKINRTLTS 753

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N I D+G   +A+AL  N+TI+ + L  N I   GA  +A  LK N  + +L  +
Sbjct: 754 LSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFS 813

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA AL+E LK +  +  L L    I   G   +   L  N T+S L+L+ N +
Sbjct: 814 SNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLQENAI 873

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL- 570
            DEGA  +A + K VN  L ++ L  N++   GA A+A ALK N   ++  LNL  N L 
Sbjct: 874 GDEGASSVAGALK-VNTTLIALYLRGNDVGAAGAKALANALKLNS--SLRRLNLQENSLG 930

Query: 571 ---TKFGQSALTDAKDLVYEMSEKEV 593
                F  SAL++     ++ ++K +
Sbjct: 931 MDGAIFVASALSENHGSPHDPTQKNI 956



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 100/198 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  +S+ +      D+G+  +AE+L  NQT   +    N I   G +     L+ N +LK
Sbjct: 749 RTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLK 808

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L  S N IGD G   L + L  N  +E L L S  + D G   +   L +N  L  L L
Sbjct: 809 ALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 868

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G +S+A AL  N+T+ +L+L GN  GA GA ALA  L+ N SLR L+L  NS
Sbjct: 869 QENAIGDEGASSVAGALKVNTTLIALYLRGNDVGAAGAKALANALKLNSSLRRLNLQENS 928

Query: 342 IGDEGIRALMSGLSSRKG 359
           +G +G   + S LS   G
Sbjct: 929 LGMDGAIFVASALSENHG 946


>gi|320169739|gb|EFW46638.1| hypothetical protein CAOG_04596 [Capsaspora owczarzaki ATCC 30864]
          Length = 604

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/180 (44%), Positives = 113/180 (62%), Gaps = 1/180 (0%)

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +AE +K  K+L  +NL +N IGD G   IADALK N T+TT+ LG N I   GA AI
Sbjct: 36  ALAIAEGLKVNKTLTTLNLSVNQIGDAGTIAIADALKVNTTLTTVYLGENQIGDAGAQAI 95

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           A  LK N+ +T L L  N IG  GA+A+++ LK +  + T+ L   QIG  GA  +A+  
Sbjct: 96  AEALKMNTTLTELGLHQNQIGDAGAQAIADALKVNKTVTTIYLYTNQIGDDGALAIAEAF 155

Query: 496 RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           + N T++ L L+ N + D GA+ +A++ KV  + LT++ L  N+I D GA A+A+ALKAN
Sbjct: 156 KVNTTLTTLSLQQNQIGDVGAQAIAEALKVT-KTLTTLFLWQNQIGDAGAQALAEALKAN 214



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/190 (42%), Positives = 109/190 (57%), Gaps = 1/190 (0%)

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L G   G   A A+A+GL+ NK+L  L+L  N IGD G  A+   L      L  + +G 
Sbjct: 26  LKGKQIGDAKALAIAEGLKVNKTLTTLNLSVNQIGDAGTIAIADALKVNT-TLTTVYLGE 84

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA  +AE +K   +L  + L+ N IGD GA+ IADALK N+T+TTI L  N I 
Sbjct: 85  NQIGDAGAQAIAEALKMNTTLTELGLHQNQIGDAGAQAIADALKVNKTVTTIYLYTNQIG 144

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA AIA   K N+ +T+L L  N IG  GA+A++E LK    + TL L   QIG +GA
Sbjct: 145 DDGALAIAEAFKVNTTLTTLSLQQNQIGDVGAQAIAEALKVTKTLTTLFLWQNQIGDAGA 204

Query: 489 EFVADMLRYN 498
           + +A+ L+ N
Sbjct: 205 QALAEALKAN 214



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 114/215 (53%), Gaps = 29/215 (13%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D  A AIAE LK N  L  L L+ N I  +G  ++A+AL  N+T+ +++L  N  G  GA
Sbjct: 33  DAKALAIAEGLKVNKTLTTLNLSVNQIGDAGTIAIADALKVNTTLTTVYLGENQIGDAGA 92

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+A+ L+ N +L EL LH N IGD G +A                             +
Sbjct: 93  QAIAEALKMNTTLTELGLHQNQIGDAGAQA-----------------------------I 123

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A+ +K  K++  I LY N IGD+GA  IA+A K N T+TT+ L  N I   GA AIA  L
Sbjct: 124 ADALKVNKTVTTIYLYTNQIGDDGALAIAEAFKVNTTLTTLSLQQNQIGDVGAQAIAEAL 183

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           K    +T+L L  N IG  GA+AL+E LK +G  +
Sbjct: 184 KVTKTLTTLFLWQNQIGDAGAQALAEALKANGQYH 218



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 112/183 (61%), Gaps = 3/183 (1%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD  A  IA+ LK N+T+TT++L  N I   G  AIA  LK N+ +T++ L  N IG  
Sbjct: 31  IGDAKALAIAEGLKVNKTLTTLNLSVNQIGDAGTIAIADALKVNTTLTTVYLGENQIGDA 90

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA+A++E LK +  +  L L   QIG +GA+ +AD L+ N T++ + L  N + D+GA  
Sbjct: 91  GAQAIAEALKMNTTLTELGLHQNQIGDAGAQAIADALKVNKTVTTIYLYTNQIGDDGALA 150

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           +A++FKV N  LT++ L  N+I D GA AIA+ALK  +   +T+L L  N +   G  AL
Sbjct: 151 IAEAFKV-NTTLTTLSLQQNQIGDVGAQAIAEALKVTK--TLTTLFLWQNQIGDAGAQAL 207

Query: 579 TDA 581
            +A
Sbjct: 208 AEA 210



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 112/212 (52%), Gaps = 6/212 (2%)

Query: 314 GGALGANALAKGLE-GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
           G AL A  LAK     N S     L G  IGD    A+  GL   K  L  L++  N I 
Sbjct: 6   GSALDATRLAKWFYYPNVSF----LKGKQIGDAKALAIAEGLKVNK-TLTTLNLSVNQIG 60

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             G   +A+ +K   +L  + L  N IGD GA+ IA+ALK N T+T + L  N I   GA
Sbjct: 61  DAGTIAIADALKVNTTLTTVYLGENQIGDAGAQAIAEALKMNTTLTELGLHQNQIGDAGA 120

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            AIA  LK N  +T++ L  N IG DGA A++E  K +  + TL L   QIG  GA+ +A
Sbjct: 121 QAIADALKVNKTVTTIYLYTNQIGDDGALAIAEAFKVNTTLTTLSLQQNQIGDVGAQAIA 180

Query: 493 DMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           + L+   T++ L L  N + D GA+ LA++ K
Sbjct: 181 EALKVTKTLTTLFLWQNQIGDAGAQALAEALK 212



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 96/160 (60%), Gaps = 3/160 (1%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L G  I    A AIA  LK N  +T+L+L+ N IG  G  A+++ LK +  + T+ LG  
Sbjct: 26  LKGKQIGDAKALAIAEGLKVNKTLTTLNLSVNQIGDAGTIAIADALKVNTTLTTVYLGEN 85

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           QIG +GA+ +A+ L+ N T++ L L  N + D GA+ +A + KV N+ +T+I L  N+I 
Sbjct: 86  QIGDAGAQAIAEALKMNTTLTELGLHQNQIGDAGAQAIADALKV-NKTVTTIYLYTNQIG 144

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           DDGA AIA+A K N    +T+L+L  N +   G  A+ +A
Sbjct: 145 DDGALAIAEAFKVN--TTLTTLSLQQNQIGDVGAQAIAEA 182



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 96/188 (51%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G+  GD     +AE L  N+T   ++ + N I  AG  A    L+ N  L T+ L  N
Sbjct: 26  LKGKQIGDAKALAIAEGLKVNKTLTTLNLSVNQIGDAGTIAIADALKVNTTLTTVYLGEN 85

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + + L  N  +  L L    + D GA+AIA+ LK N  +  + L  N I  
Sbjct: 86  QIGDAGAQAIAEALKMNTTLTELGLHQNQIGDAGAQAIADALKVNKTVTTIYLYTNQIGD 145

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++AEA   N+T+ +L L  N  G +GA A+A+ L+  K+L  L L  N IGD G +
Sbjct: 146 DGALAIAEAFKVNTTLTTLSLQQNQIGDVGAQAIAEALKVTKTLTTLFLWQNQIGDAGAQ 205

Query: 349 ALMSGLSS 356
           AL   L +
Sbjct: 206 ALAEALKA 213



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 101/201 (50%), Gaps = 29/201 (14%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L TLNLS N IGD G   + D L  N  +  + L    + D GA+AIAE LK N
Sbjct: 43  LKVNKTLTTLNLSVNQIGDAGTIAIADALKVNTTLTTVYLGENQIGDAGAQAIAEALKMN 102

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L  L L+ N I  +G  ++A+AL  N T+ +++L  N  G  GA A+A+  + N +L 
Sbjct: 103 TTLTELGLHQNQIGDAGAQAIADALKVNKTVTTIYLYTNQIGDDGALAIAEAFKVNTTLT 162

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L  N IGD G +A                             +AE +K  K+L  + 
Sbjct: 163 TLSLQQNQIGDVGAQA-----------------------------IAEALKVTKTLTTLF 193

Query: 394 LYMNDIGDEGAEKIADALKQN 414
           L+ N IGD GA+ +A+ALK N
Sbjct: 194 LWQNQIGDAGAQALAEALKAN 214



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 84/168 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +++++S    GD G   +A++L  N T   V    N I  AG +A    L+ N  L 
Sbjct: 47  KTLTTLNLSVNQIGDAGTIAIADALKVNTTLTTVYLGENQIGDAGAQAIAEALKMNTTLT 106

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IGD G + + D L  N  V  + L +  + D+GA AIAE  K N+ L  L L
Sbjct: 107 ELGLHQNQIGDAGAQAIADALKVNKTVTTIYLYTNQIGDDGALAIAEAFKVNTTLTTLSL 166

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
             N I   G  ++AEAL    T+ +L L  N  G  GA ALA+ L+ N
Sbjct: 167 QQNQIGDVGAQAIAEALKVTKTLTTLFLWQNQIGDAGAQALAEALKAN 214


>gi|219109652|ref|XP_002176580.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411115|gb|EEC51043.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 692

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 177/347 (51%), Gaps = 13/347 (3%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRS 306
           ++ L+L +  L    +  +A +L     LR L+L++N ++  G  +L  AL  E   +R 
Sbjct: 67  LQALRLPNNGLTSRSSVNLANILSTTQTLRELDLSDNQVESQGLLALLPALTHETCALRR 126

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L  N  GA GA  +A  L  N+SLREL +  N++G +    ++S    R   L  LD+
Sbjct: 127 LDLYNNKLGATGATQIAAILRDNRSLRELRIGKNNLGRKKSLKVISTALQRNATLRTLDL 186

Query: 367 GNNSISAKGAFHVAEYIK---NCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDL 422
            +N I   GA  +A  +    +   L  ++L  N I  EG   +  AL + NRT+  ++L
Sbjct: 187 SHNQIDDGGAILLAPVLDPEVSQSRLRRLDLTYNKIWPEGVRNLTGALLEGNRTLRCLNL 246

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL------SEVLKFHGNINTL 476
             N++  +GA ++A +LK +  +  L L+ N +G  G K L      S++L   G +  L
Sbjct: 247 SMNHVGPEGAESLAVLLKFSFTLQELLLSRNALGDHGVKLLCQGLDESKLLSGTG-LQRL 305

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L W +I   GA+ +A ML  N  +  L+L +N +  +GAK LA +    N+ALT ++L 
Sbjct: 306 DLDWNEIHDDGAKELATMLLDNAILESLNLASNAIGSDGAKALANALH-SNQALTFLNLM 364

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            N+IRD GAF++A+ L        T L   NN LT  G+  L  A D
Sbjct: 365 GNQIRDPGAFSLAENLCRPSCRVETLLWEKNNCLTPLGEERLIAAFD 411



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 218/473 (46%), Gaps = 59/473 (12%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA---EEVSFAANGITAAGIKAFDG-VLQSNIA 219
             ++D+S     D G   LA  L    +      +    N I   G++   G +L+ N  
Sbjct: 181 LRTLDLSHNQIDDGGAILLAPVLDPEVSQSRLRRLDLTYNKIWPEGVRNLTGALLEGNRT 240

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI---- 275
           L+ LNLS N +G EG + L  +L  +  ++ L LS   L D G K + + L  + +    
Sbjct: 241 LRCLNLSMNHVGPEGAESLAVLLKFSFTLQELLLSRNALGDHGVKLLCQGLDESKLLSGT 300

Query: 276 -LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L+ L+L+ N I   G   LA  LL+N+ + SL+L  N  G+ GA ALA  L  N++L  
Sbjct: 301 GLQRLDLDWNEIHDDGAKELATMLLDNAILESLNLASNAIGSDGAKALANALHSNQALTF 360

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKL-AVLDIGNNSISAKG------AF---------- 377
           L+L GN I D G  +L   L     ++  +L   NN ++  G      AF          
Sbjct: 361 LNLMGNQIRDPGAFSLAENLCRPSCRVETLLWEKNNCLTPLGEERLIAAFDFRKNRRTWL 420

Query: 378 -HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
             +   I+ C+S+ + NL    + DE    +A  L Q R  ++T  LGG+ +  +    +
Sbjct: 421 GQILREIETCQSVNF-NLLSCKLSDEEIMALAKHLAQYRPRVSTAYLGGHGVTVRSMKVL 479

Query: 436 AR-VLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           A+ VL +N V +  L L +  +G +GA AL+E L  + N+ TL L  C I   GA+ +A 
Sbjct: 480 AKDVLANNHVNLQRLHLQHTRVGDEGAGALAEALLSNSNLRTLTLFDCSISPEGAKLLAH 539

Query: 494 MLRYNNTISILDLRANGLRDEGAKCL--------AQSFKVVNEA---------------- 529
            L  N +++ L+L  N + + GA+ L          S  V+N                  
Sbjct: 540 TLAQNKSLTQLNLHKNAIGNRGAQELFTALVDPPHPSLVVLNLEQNEISDGALLQFQSFG 599

Query: 530 -LTSIDLAFNEIRDDGAFAIAQAL---KANEDVAVTSLNLANNFLTKFGQSAL 578
            L  +++A N   D  A  +A+A     AN  + ++ L ++NNF++K G  AL
Sbjct: 600 RLQQLNIASNNFTDRAALDLAKACFNSLANGTLQLSWLTVSNNFISKKGLKAL 652


>gi|290979790|ref|XP_002672616.1| predicted protein [Naegleria gruberi]
 gi|284086194|gb|EFC39872.1| predicted protein [Naegleria gruberi]
          Length = 559

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 231/484 (47%), Gaps = 108/484 (22%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F  E++  +S+ ++    GDEG+ F++E     +    +    N I   G  +   + Q
Sbjct: 117 KFISEMKQLTSLGIAENRIGDEGVKFISEM----KQLTLLDICCNEIGVEGATSISEMKQ 172

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDI-------LVDN--------AGVERLQLSSVDLRD 260
               L +LN+SGN IGDEG K + ++       + DN        +  E  QL+S+ + D
Sbjct: 173 ----LTSLNISGNRIGDEGAKLISEMKQLTLLNIADNRICVEGAKSISEMKQLTSLSISD 228

Query: 261 E-----GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
                 GAK I+E+ +    L +L ++NN I   G    A+ + E   + SL ++ N   
Sbjct: 229 NEIGVVGAKLISEMNQ----LTLLNISNNEIGDEG----AKFISEMKQLISLDISNNLID 280

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA ++++     K L  L ++ N IGDEG++ +     S+  +L  LDI  N I   G
Sbjct: 281 IEGAKSISEM----KQLTSLEIYYNEIGDEGVKFI-----SKMEQLTSLDISGNQIGVGG 331

Query: 376 AFHVAEY--------------------IKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           A  ++E                     I   K L  +N+Y N IGDEG + I++      
Sbjct: 332 AKSISEMKQLTFLQIFSNRIGDEGANSISEMKQLTSLNIYYNQIGDEGVKFISEM----E 387

Query: 416 TITTIDLGGNNIHSKGASAIA--------------------RVLKDNSVITSLDLAYNPI 455
            +T++D+GGN I   GA +I+                    + + +   +TSL+++ N I
Sbjct: 388 QLTSLDIGGNQIGVGGAKSISEMKQLTFLQIFSNRIGDEGVKFISEMKQLTSLNISGNRI 447

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G +GAK++SE+ +    +  L +   +IG  G +F+++M      +++L + +N + DEG
Sbjct: 448 GDEGAKSISEMKQ----LTLLYISSNEIGDEGVKFISEM----KQLTLLQIYSNRIGDEG 499

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
            K +++      + LTS++++ N I D+G  +I++  +      +TSLN++NN +   G 
Sbjct: 500 VKSISEM-----KQLTSLNISGNRIGDEGVKSISEMKQ------LTSLNISNNRIGDEGV 548

Query: 576 SALT 579
             LT
Sbjct: 549 KLLT 552



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 143/264 (54%), Gaps = 36/264 (13%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           AK +   K L  L +  N IGDEG++ +     S   +L +LDI  N I  +GA  ++E 
Sbjct: 116 AKFISEMKQLTSLGIAENRIGDEGVKFI-----SEMKQLTLLDICCNEIGVEGATSISEM 170

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
               K L  +N+  N IGDEGA+ I++     + +T +++  N I  +GA +I+ + +  
Sbjct: 171 ----KQLTSLNISGNRIGDEGAKLISEM----KQLTLLNIADNRICVEGAKSISEMKQ-- 220

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +TSL ++ N IG  GAK +SE+      +  L +   +IG  GA+F+++M +    IS
Sbjct: 221 --LTSLSISDNEIGVVGAKLISEM----NQLTLLNISNNEIGDEGAKFISEMKQL---IS 271

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            LD+  N +  EGAK +++      + LTS+++ +NEI D+G   I++  +      +TS
Sbjct: 272 -LDISNNLIDIEGAKSISEM-----KQLTSLEIYYNEIGDEGVKFISKMEQ------LTS 319

Query: 563 LNLANNFLTKFGQSALTDAKDLVY 586
           L+++ N +   G  ++++ K L +
Sbjct: 320 LDISGNQIGVGGAKSISEMKQLTF 343



 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 28/134 (20%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAE----SLGY---NQTAEE-------------V 195
           +F  E++  +S+++SG   GDEG   ++E    +L Y   N+  +E             +
Sbjct: 429 KFISEMKQLTSLNISGNRIGDEGAKSISEMKQLTLLYISSNEIGDEGVKFISEMKQLTLL 488

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
              +N I   G+K+   + Q    L +LN+SGN IGDEGVK + ++      +  L +S+
Sbjct: 489 QIYSNRIGDEGVKSISEMKQ----LTSLNISGNRIGDEGVKSISEM----KQLTSLNISN 540

Query: 256 VDLRDEGAKAIAEL 269
             + DEG K +  L
Sbjct: 541 NRIGDEGVKLLTSL 554


>gi|320170893|gb|EFW47792.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 401

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/192 (42%), Positives = 115/192 (59%), Gaps = 3/192 (1%)

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +LY  ++GD GA  IA+ALK N T+T + L  N I   GA A+A  LK N  +T LD+  
Sbjct: 26  SLYGEEVGDAGAPAIAEALKVNTTMTWLALWQNQIGEVGARALAETLKVNETVTKLDIWR 85

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA A++E LK +  +N + LG  QI   GA  +A+ L+ N T++ LDL  N + 
Sbjct: 86  NQIGDAGASAIAEALKVNTTVNMVDLGGNQISDIGASAIAEALKVNKTVTKLDLDENQIG 145

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
             GA+ LA++FK VN  +T +DL  N I D GA AIA+ +K N+ +A   LNL+ N +  
Sbjct: 146 SAGAQALAEAFK-VNTTVTQVDLGENLIGDAGAQAIAELIKVNKTLA--WLNLSWNCIGD 202

Query: 573 FGQSALTDAKDL 584
            G  A+ DA++ 
Sbjct: 203 VGIQAIADAREF 214



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 1/190 (0%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            +  L+G  +GD G  A+   L      +  L +  N I   GA  +AE +K  +++  +
Sbjct: 23  HDFSLYGEEVGDAGAPAIAEALKVNT-TMTWLALWQNQIGEVGARALAETLKVNETVTKL 81

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +++ N IGD GA  IA+ALK N T+  +DLGGN I   GASAIA  LK N  +T LDL  
Sbjct: 82  DIWRNQIGDAGASAIAEALKVNTTVNMVDLGGNQISDIGASAIAEALKVNKTVTKLDLDE 141

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG+ GA+AL+E  K +  +  + LG   IG +GA+ +A++++ N T++ L+L  N + 
Sbjct: 142 NQIGSAGAQALAEAFKVNTTVTQVDLGENLIGDAGAQAIAELIKVNKTLAWLNLSWNCIG 201

Query: 513 DEGAKCLAQS 522
           D G + +A +
Sbjct: 202 DVGIQAIADA 211



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 107/177 (60%), Gaps = 1/177 (0%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K   ++ W+ L+ N IG+ GA  +A+ LK N T+T +D+  N I   GASA
Sbjct: 36  GAPAIAEALKVNTTMTWLALWQNQIGEVGARALAETLKVNETVTKLDIWRNQIGDAGASA 95

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N+ +  +DL  N I   GA A++E LK +  +  L L   QIG++GA+ +A+ 
Sbjct: 96  IAEALKVNTTVNMVDLGGNQISDIGASAIAEALKVNKTVTKLDLDENQIGSAGAQALAEA 155

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
            + N T++ +DL  N + D GA+ +A+  K VN+ L  ++L++N I D G  AIA A
Sbjct: 156 FKVNTTVTQVDLGENLIGDAGAQAIAELIK-VNKTLAWLNLSWNCIGDVGIQAIADA 211



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 117/222 (52%), Gaps = 3/222 (1%)

Query: 285 MIDYSGFTSLAEALLE--NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           M+ Y   T     L +   +T     L G   G  GA A+A+ L+ N ++  L L  N I
Sbjct: 1   MLSYQNITPSPRELNDKVTNTPHDFSLYGEEVGDAGAPAIAEALKVNTTMTWLALWQNQI 60

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           G+ G RAL   L   +  +  LDI  N I   GA  +AE +K   ++  ++L  N I D 
Sbjct: 61  GEVGARALAETLKVNE-TVTKLDIWRNQIGDAGASAIAEALKVNTTVNMVDLGGNQISDI 119

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  IA+ALK N+T+T +DL  N I S GA A+A   K N+ +T +DL  N IG  GA+A
Sbjct: 120 GASAIAEALKVNKTVTKLDLDENQIGSAGAQALAEAFKVNTTVTQVDLGENLIGDAGAQA 179

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           ++E++K +  +  L L W  IG  G + +AD   ++ + + L
Sbjct: 180 IAELIKVNKTLAWLNLSWNCIGDVGIQAIADAREFHPSPTAL 221



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 114/190 (60%), Gaps = 1/190 (0%)

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++AEAL  N+T+  L L  N  G +GA ALA+ L+ N+++ +L +  N IGD G  
Sbjct: 35  AGAPAIAEALKVNTTMTWLALWQNQIGEVGARALAETLKVNETVTKLDIWRNQIGDAGAS 94

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+   L      + ++D+G N IS  GA  +AE +K  K++  ++L  N IG  GA+ +A
Sbjct: 95  AIAEALKVNT-TVNMVDLGGNQISDIGASAIAEALKVNKTVTKLDLDENQIGSAGAQALA 153

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A K N T+T +DLG N I   GA AIA ++K N  +  L+L++N IG  G +A+++  +
Sbjct: 154 EAFKVNTTVTQVDLGENLIGDAGAQAIAELIKVNKTLAWLNLSWNCIGDVGIQAIADARE 213

Query: 469 FHGNINTLKL 478
           FH +   L++
Sbjct: 214 FHPSPTALRI 223



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 29/220 (13%)

Query: 191 TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER 250
           T  + S     +  AG  A    L+ N  +  L L  N IG+ G + L + L  N  V +
Sbjct: 21  TPHDFSLYGEEVGDAGAPAIAEALKVNTTMTWLALWQNQIGEVGARALAETLKVNETVTK 80

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L +    + D GA AIAE LK N+ + +++L  N I   G +++AEAL  N T+  L L+
Sbjct: 81  LDIWRNQIGDAGASAIAEALKVNTTVNMVDLGGNQISDIGASAIAEALKVNKTVTKLDLD 140

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G+ GA ALA+  + N ++ ++ L  N IGD G +A                     
Sbjct: 141 ENQIGSAGAQALAEAFKVNTTVTQVDLGENLIGDAGAQA--------------------- 179

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
                   +AE IK  K+L W+NL  N IGD G + IADA
Sbjct: 180 --------IAELIKVNKTLAWLNLSWNCIGDVGIQAIADA 211



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 95/182 (52%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G   GD G   +AE+L  N T   ++   N I   G +A    L+ N  +  L++  N
Sbjct: 27  LYGEEVGDAGAPAIAEALKVNTTMTWLALWQNQIGEVGARALAETLKVNETVTKLDIWRN 86

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G   + + L  N  V  + L    + D GA AIAE LK N  +  L+L+ N I  
Sbjct: 87  QIGDAGASAIAEALKVNTTVNMVDLGGNQISDIGASAIAEALKVNKTVTKLDLDENQIGS 146

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  +LAEA   N+T+  + L  N  G  GA A+A+ ++ NK+L  L+L  N IGD GI+
Sbjct: 147 AGAQALAEAFKVNTTVTQVDLGENLIGDAGAQAIAELIKVNKTLAWLNLSWNCIGDVGIQ 206

Query: 349 AL 350
           A+
Sbjct: 207 AI 208



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 68/146 (46%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E  K     + +D+     GD G   +AE+L  N T   V    N I+  G  A  
Sbjct: 66  RALAETLKVNETVTKLDIWRNQIGDAGASAIAEALKVNTTVNMVDLGGNQISDIGASAIA 125

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  +  L+L  N IG  G + L +    N  V ++ L    + D GA+AIAEL+K
Sbjct: 126 EALKVNKTVTKLDLDENQIGSAGAQALAEAFKVNTTVTQVDLGENLIGDAGAQAIAELIK 185

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEA 297
            N  L  L L+ N I   G  ++A+A
Sbjct: 186 VNKTLAWLNLSWNCIGDVGIQAIADA 211


>gi|334327902|ref|XP_001371709.2| PREDICTED: NACHT, LRR and PYD domains-containing protein 3
           [Monodelphis domestica]
          Length = 1011

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 170/337 (50%), Gaps = 11/337 (3%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQL 253
           ++ +   +TA+  +    +L++N  L  L+LS N +GDEG+K LC++L + N  ++ L L
Sbjct: 640 IALSKCQLTASCCQHLSSLLKNNKNLTYLDLSMNFLGDEGIKALCEVLRNQNCNIQELNL 699

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGN 312
           S     D   K ++  L  +  + +L+L+ N +   G   L EAL   +  ++ L L+  
Sbjct: 700 SRCRFSDACCKNLSSALMAHGNINILDLSENTLADVGMNLLCEALGSSDCNLQELKLSQC 759

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
           +        L+  ++ N+SL  L + GN + D GIR L   L      L  L +    I+
Sbjct: 760 HFTDACCQDLSTCIK-NQSLIHLDVSGNFLQDSGIRLLCEALRHPTCNLQKLLLSLCHIT 818

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKG 431
                 V+  +KN +SL+ ++L  N++ + G + + +AL+ QN  + T++L    + +  
Sbjct: 819 DSSCQDVSFALKNNRSLIHLDLGCNNLYNHGVKLLCEALENQNCNLQTLELWNCQLSAAC 878

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT----LKLGWCQIGASG 487
               + VLK N  +T L+L  NP+  +G K L E L   GN N     LKL  C + A G
Sbjct: 879 CHEFSSVLKKNQSLTHLNLGANPLRNNGVKVLCEAL---GNQNCKLQKLKLCKCLLSAVG 935

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
             +++  L+ N  ++ L L  NGL D+G K L ++ K
Sbjct: 936 CRYLSTALKSNQNLTHLKLTGNGLGDDGVKLLFEALK 972



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 154/321 (47%), Gaps = 5/321 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAF 210
           Q L+   K  +  + +D+S    GDEG+  L E L   N   +E++ +    + A  K  
Sbjct: 653 QHLSSLLKNNKNLTYLDLSMNFLGDEGIKALCEVLRNQNCNIQELNLSRCRFSDACCKNL 712

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAEL 269
              L ++  +  L+LS N + D G+  LC+ L   +  ++ L+LS     D   + ++  
Sbjct: 713 SSALMAHGNINILDLSENTLADVGMNLLCEALGSSDCNLQELKLSQCHFTDACCQDLSTC 772

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEG 328
           +KN S++  L+++ N +  SG   L EAL   +  ++ L L+  +        ++  L+ 
Sbjct: 773 IKNQSLIH-LDVSGNFLQDSGIRLLCEALRHPTCNLQKLLLSLCHITDSSCQDVSFALKN 831

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N+SL  L L  N++ + G++ L   L ++   L  L++ N  +SA      +  +K  +S
Sbjct: 832 NRSLIHLDLGCNNLYNHGVKLLCEALENQNCNLQTLELWNCQLSAACCHEFSSVLKKNQS 891

Query: 389 LLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           L  +NL  N + + G + + +AL  QN  +  + L    + + G   ++  LK N  +T 
Sbjct: 892 LTHLNLGANPLRNNGVKVLCEALGNQNCKLQKLKLCKCLLSAVGCRYLSTALKSNQNLTH 951

Query: 448 LDLAYNPIGADGAKALSEVLK 468
           L L  N +G DG K L E LK
Sbjct: 952 LKLTGNGLGDDGVKLLFEALK 972



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 158/349 (45%), Gaps = 8/349 (2%)

Query: 238 LCDILVDNAGVERLQ--LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
            C     N G  RL   LS   L     + ++ LLKNN  L  L+L+ N +   G  +L 
Sbjct: 625 FCIKFCHNLGKIRLNIALSKCQLTASCCQHLSSLLKNNKNLTYLDLSMNFLGDEGIKALC 684

Query: 296 EALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           E L  +N  I+ L+L+           L+  L  + ++  L L  N++ D G+  L   L
Sbjct: 685 EVLRNQNCNIQELNLSRCRFSDACCKNLSSALMAHGNINILDLSENTLADVGMNLLCEAL 744

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
            S    L  L +     +      ++  IKN +SL+ +++  N + D G   + +AL+  
Sbjct: 745 GSSDCNLQELKLSQCHFTDACCQDLSTCIKN-QSLIHLDVSGNFLQDSGIRLLCEALRHP 803

Query: 415 RT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-N 472
              +  + L   +I       ++  LK+N  +  LDL  N +   G K L E L+    N
Sbjct: 804 TCNLQKLLLSLCHITDSSCQDVSFALKNNRSLIHLDLGCNNLYNHGVKLLCEALENQNCN 863

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           + TL+L  CQ+ A+     + +L+ N +++ L+L AN LR+ G K L ++    N  L  
Sbjct: 864 LQTLELWNCQLSAACCHEFSSVLKKNQSLTHLNLGANPLRNNGVKVLCEALGNQNCKLQK 923

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           + L    +   G   ++ ALK+N++  +T L L  N L   G   L +A
Sbjct: 924 LKLCKCLLSAVGCRYLSTALKSNQN--LTHLKLTGNGLGDDGVKLLFEA 970



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 3/220 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+SG    D G+  L E+L +     +++  +   IT +  +     L++N +L  L+L
Sbjct: 781  LDVSGNFLQDSGIRLLCEALRHPTCNLQKLLLSLCHITDSSCQDVSFALKNNRSLIHLDL 840

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
              N + + GVK LC+ L + N  ++ L+L +  L        + +LK N  L  L L  N
Sbjct: 841  GCNNLYNHGVKLLCEALENQNCNLQTLELWNCQLSAACCHEFSSVLKKNQSLTHLNLGAN 900

Query: 285  MIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             +  +G   L EAL  +N  ++ L L      A+G   L+  L+ N++L  L L GN +G
Sbjct: 901  PLRNNGVKVLCEALGNQNCKLQKLKLCKCLLSAVGCRYLSTALKSNQNLTHLKLTGNGLG 960

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
            D+G++ L   L +   KL  L    N  +    + +A Y 
Sbjct: 961  DDGVKLLFEALKNSDCKLQKLTHNKNEANEMTLYLLAAYF 1000


>gi|261326990|emb|CBH09965.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 759

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 184/357 (51%), Gaps = 15/357 (4%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F  ++ +N   K   L  + +G    + +  IL  N     L LS   L DEGA  IA+L
Sbjct: 131 FMELISANCKGKFFCLRESGLGPMSAEAIAHILSSNNKYTILDLSGNRLLDEGACFIAKL 190

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH------LNGNYGGALGANALA 323
           +  N  L  + L +N I + G  +LA+ALLEN+TI SL       +NGN+    GA A+ 
Sbjct: 191 ISVNRTLVHVGLRSNDIGHIGGEALADALLENNTIISLDVGAHSGINGNHIATEGAKAIG 250

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L +L+L  N +G  GI  + SGL   +  L  LDI  N++  +GA  +A+ +
Sbjct: 251 NVLKSNKVLAKLNLGCNGLGHAGISHIASGLDGNES-LTHLDISVNNLGYEGAKIIADVL 309

Query: 384 KNCKSLLWINLYMNDIGDEGA----EKIADALKQNR-TITTIDLGGNNIHSKGASAIARV 438
           ++   +  ++L  N++ D G       IA A++     I  +++  N++ +  A AI +V
Sbjct: 310 ES-SCITHLSLQRNNLTDSGGMVIFRAIAAAVENGEDRIEFLNIESNDLSTNSAKAIQKV 368

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  +S +  L ++ N  G+  +K + E L  +  + +L +  C+I  +  +     L  N
Sbjct: 369 LTVSSALKQLRISLNCFGS-ASKFILEGLAENKGLKSLHMASCEIRETDGQPFVTGLSTN 427

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            T+  LDL  N LRD    C+A++ K  N+ L S+DL+ N I D+G  AIA  LK+N
Sbjct: 428 ATLQHLDLSRNKLRDAATICIAEALK-TNKGLVSLDLSCNNIMDEGGSAIAMFLKSN 483



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 165/368 (44%), Gaps = 19/368 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           ++ +D+SG    DEG  F+A+ +  N+T   V   +N I   G +A    L  N  + +L
Sbjct: 169 YTILDLSGNRLLDEGACFIAKLISVNRTLVHVGLRSNDIGHIGGEALADALLENNTIISL 228

Query: 224 N------LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           +      ++GN I  EG K + ++L  N  + +L L    L   G   IA  L  N  L 
Sbjct: 229 DVGAHSGINGNHIATEGAKAIGNVLKSNKVLAKLNLGCNGLGHAGISHIASGLDGNESLT 288

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN----YGGALGANALAKGLE-GNKSL 332
            L+++ N + Y G   +A+ +LE+S I  L L  N     GG +   A+A  +E G   +
Sbjct: 289 HLDISVNNLGYEGAKIIAD-VLESSCITHLSLQRNNLTDSGGMVIFRAIAAAVENGEDRI 347

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L++  N +     +A+   L+     L  L I  N   +   F + E +   K L  +
Sbjct: 348 EFLNIESNDLSTNSAKAIQKVLTVSSA-LKQLRISLNCFGSASKF-ILEGLAENKGLKSL 405

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++   +I +   +     L  N T+  +DL  N +       IA  LK N  + SLDL+ 
Sbjct: 406 HMASCEIRETDGQPFVTGLSTNATLQHLDLSRNKLRDAATICIAEALKTNKGLVSLDLSC 465

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGW-CQIGASGAEFVADMLRYNNTISILDLRANGL 511
           N I  +G  A++  LK +  +  L+    C    +G + + + LR N ++  +D+  N  
Sbjct: 466 NNIMDEGGSAIAMFLKSNSTLRELRFRRNCMSNVTG-DLLDEQLRSNTSLENMDITYNDF 524

Query: 512 RDEGAKCL 519
           R    KCL
Sbjct: 525 R---YKCL 529



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 129/316 (40%), Gaps = 96/316 (30%)

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           S   K  +LD+  N +  +GA  +A+ I   ++L+ + L  NDIG  G E +ADAL +N 
Sbjct: 164 SSNNKYTILDLSGNRLLDEGACFIAKLISVNRTLVHVGLRSNDIGHIGGEALADALLENN 223

Query: 416 TITTIDLG------GNNIHSKGASAIARVLKDNSVI------------------------ 445
           TI ++D+G      GN+I ++GA AI  VLK N V+                        
Sbjct: 224 TIISLDVGAHSGINGNHIATEGAKAIGNVLKSNKVLAKLNLGCNGLGHAGISHIASGLDG 283

Query: 446 ----TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV-----ADMLR 496
               T LD++ N +G +GAK +++VL+    I  L L    +  SG   +     A +  
Sbjct: 284 NESLTHLDISVNNLGYEGAKIIADVLE-SSCITHLSLQRNNLTDSGGMVIFRAIAAAVEN 342

Query: 497 YNNTISILDLRANGLRDEGAK--------------------CLAQSFKVVNEALTS---- 532
             + I  L++ +N L    AK                    C   + K + E L      
Sbjct: 343 GEDRIEFLNIESNDLSTNSAKAIQKVLTVSSALKQLRISLNCFGSASKFILEGLAENKGL 402

Query: 533 ------------------------------IDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
                                         +DL+ N++RD     IA+ALK N+   + S
Sbjct: 403 KSLHMASCEIRETDGQPFVTGLSTNATLQHLDLSRNKLRDAATICIAEALKTNK--GLVS 460

Query: 563 LNLANNFLTKFGQSAL 578
           L+L+ N +   G SA+
Sbjct: 461 LDLSCNNIMDEGGSAI 476



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 5/174 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + +S   FG    F L E L  N+  + +  A+  I     + F   L +N  L+ 
Sbjct: 374 ALKQLRISLNCFGSASKFIL-EGLAENKGLKSLHMASCEIRETDGQPFVTGLSTNATLQH 432

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N + D    C+ + L  N G+  L LS  ++ DEG  AIA  LK+NS LR L   
Sbjct: 433 LDLSRNKLRDAATICIAEALKTNKGLVSLDLSCNNIMDEGGSAIAMFLKSNSTLRELRFR 492

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGN---YGGALGANA-LAKGLEGNKSL 332
            N +       L E L  N+++ ++ +  N   Y   LG  A LA+  E NK L
Sbjct: 493 RNCMSNVTGDLLDEQLRSNTSLENMDITYNDFRYKCLLGIRATLARNAETNKGL 546


>gi|320165118|gb|EFW42017.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 263

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/210 (39%), Positives = 124/210 (59%), Gaps = 3/210 (1%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +K   SL  ++L  N IGD GA+ IA+ALK N T+T + LG N I   GA AIA  
Sbjct: 34  IAEALKANTSLRALDLRENQIGDAGAQAIAEALKLNTTLTELGLGQNQIGDAGAHAIAET 93

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK N+++  L L  N IG  GA+A++E L+ +  +  L  G   +G  GA+ +A+  + N
Sbjct: 94  LKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTLTELGFGCNHVGDPGAKAIAEAFKVN 153

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            T++ L L  N + D GA+ +A++ K VN AL  + L  N+I D GA AIA+ LK N+  
Sbjct: 154 TTMTGLGLSENAIGDAGAQAVAEALK-VNTALNWLFLHQNQIGDAGARAIAEVLKVNKK- 211

Query: 559 AVTSLNLANNFLTKFGQSALTDAKDLVYEM 588
            +  L L+NNF+T  G +AL    + + ++
Sbjct: 212 -LRYLYLSNNFITNVGITALRQTGNTICQL 240



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 121/221 (54%), Gaps = 5/221 (2%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           A+A+ L+ N SLR L L  N IGD G +A+   L      L  L +G N I   GA  +A
Sbjct: 33  AIAEALKANTSLRALDLRENQIGDAGAQAIAEALKLNT-TLTELGLGQNQIGDAGAHAIA 91

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           E +K+   L  ++L  N IGD GA+ IA+AL+ N T+T +  G N++   GA AIA   K
Sbjct: 92  ETLKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTLTELGFGCNHVGDPGAKAIAEAFK 151

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ +T L L+ N IG  GA+A++E LK +  +N L L   QIG +GA  +A++L+ N  
Sbjct: 152 VNTTMTGLGLSENAIGDAGAQAVAEALKVNTALNWLFLHQNQIGDAGARAIAEVLKVNKK 211

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           +  L L  N + + G   L Q+   +      +D+A +  R
Sbjct: 212 LRYLYLSNNFITNVGITALRQTGNTI----CQLDVALSAAR 248



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 102/199 (51%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K   +  ++D+     GD G   +AE+L  N T  E+    N I  AG  A  
Sbjct: 32  QAIAEALKANTSLRALDLRENQIGDAGAQAIAEALKLNTTLTELGLGQNQIGDAGAHAIA 91

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+SN  L  L+L  N IGD G + + + L  N  +  L      + D GAKAIAE  K
Sbjct: 92  ETLKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTLTELGFGCNHVGDPGAKAIAEAFK 151

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ +  L L+ N I  +G  ++AEAL  N+ +  L L+ N  G  GA A+A+ L+ NK 
Sbjct: 152 VNTTMTGLGLSENAIGDAGAQAVAEALKVNTALNWLFLHQNQIGDAGARAIAEVLKVNKK 211

Query: 332 LRELHLHGNSIGDEGIRAL 350
           LR L+L  N I + GI AL
Sbjct: 212 LRYLYLSNNFITNVGITAL 230



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 1/219 (0%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           + K   A   +++  +N  ++ +  +AE+L  N +   +    N I  AG +A    L+ 
Sbjct: 9   YDKVKHASGKLELIRQNIREDDVQAIAEALKANTSLRALDLRENQIGDAGAQAIAEALKL 68

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L  L L  N IGD G   + + L  N  + +L L    + D GA+AIAE L+ N+ L
Sbjct: 69  NTTLTELGLGQNQIGDAGAHAIAETLKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTL 128

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L    N +   G  ++AEA   N+T+  L L+ N  G  GA A+A+ L+ N +L  L 
Sbjct: 129 TELGFGCNHVGDPGAKAIAEAFKVNTTMTGLGLSENAIGDAGAQAVAEALKVNTALNWLF 188

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           LH N IGD G RA+   L   K KL  L + NN I+  G
Sbjct: 189 LHQNQIGDAGARAIAEVLKVNK-KLRYLYLSNNFITNVG 226


>gi|72386927|ref|XP_843888.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62359016|gb|AAX79465.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70800420|gb|AAZ10329.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 759

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 184/357 (51%), Gaps = 15/357 (4%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F  ++ +N   K   L  + +G    + +  IL  N     L LS   L DEGA  IA+L
Sbjct: 131 FMELISANCKGKFFCLRESGLGPMSAEAIAHILSSNNKYTILDLSGNRLLDEGACFIAKL 190

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH------LNGNYGGALGANALA 323
           +  N  L  + L +N I + G  +LA+ALLEN+TI SL       +NGN+    GA A+ 
Sbjct: 191 ISVNRTLVHVGLRSNDIGHIGGEALADALLENNTIISLDVGAHSGINGNHIATEGAKAIG 250

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L +L+L  N +G  GI  + SGL   +  L  LDI  N++  +GA  +A+ +
Sbjct: 251 NVLKSNKVLAKLNLGCNGLGHAGISHIASGLDGNES-LTHLDISVNNLGYEGAKIIADVL 309

Query: 384 KNCKSLLWINLYMNDIGDEGA----EKIADALKQNR-TITTIDLGGNNIHSKGASAIARV 438
           ++   +  ++L  N++ D G       IA A++     I  +++  N++ +  A AI +V
Sbjct: 310 ES-SCITHLSLQRNNLTDSGGMVIFRAIAAAVENGEDRIEFLNIESNDLSTNSAKAIQKV 368

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  +S +  L ++ N  G+  +K + E L  +  + +L +  C+I  +  +     L  N
Sbjct: 369 LTVSSALKQLRISLNCFGS-ASKFILEGLAENKGLKSLHMASCEIRETDGQPFVTGLSTN 427

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            T+  LDL  N LRD    C+A++ K  N+ L S+DL+ N I D+G  AIA  LK+N
Sbjct: 428 ATLQHLDLSRNKLRDAATICIAEALK-TNKGLVSLDLSCNNIMDEGGSAIAMFLKSN 483



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 166/368 (45%), Gaps = 19/368 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           ++ +D+SG    DEG  F+A+ +  N+T   V   +N I   G +A    L  N  + +L
Sbjct: 169 YTILDLSGNRLLDEGACFIAKLISVNRTLVHVGLRSNDIGHIGGEALADALLENNTIISL 228

Query: 224 N------LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           +      ++GN I  EG K + ++L  N  + +L L    L   G   IA  L  N  L 
Sbjct: 229 DVGAHSGINGNHIATEGAKAIGNVLKSNKVLAKLNLGCNGLGHAGISHIASGLDGNESLT 288

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN----YGGALGANALAKGLE-GNKSL 332
            L+++ N + Y G   +A+ +LE+S I  L L  N     GG +   A+A  +E G   +
Sbjct: 289 HLDISVNNLGYEGAKIIAD-VLESSCITHLSLQRNNLTDSGGMVIFRAIAAAVENGEDRI 347

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L++  N +     +A+   L+     L  L I  N   +   F + E +   K L  +
Sbjct: 348 EFLNIESNDLSTNSAKAIQKVLTVSSA-LKQLRISLNCFGSASKF-ILEGLAENKGLKSL 405

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++   +I +   +     L  N T+  +DL  N +       IA  LK N  + SLDL+ 
Sbjct: 406 HMASCEIRETDGQPFVTGLSTNATLQHLDLSRNKLRDAATICIAEALKTNKGLVSLDLSC 465

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGW-CQIGASGAEFVADMLRYNNTISILDLRANGL 511
           N I  +G  A++  LK +  +  L+L   C    +G + + + LR N ++  +D+  N  
Sbjct: 466 NNIMDEGGSAIAMFLKSNSTLRELRLRRNCMSNVTG-DLLDEQLRSNTSLENMDITYNDF 524

Query: 512 RDEGAKCL 519
           R    KCL
Sbjct: 525 R---YKCL 529



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 129/316 (40%), Gaps = 96/316 (30%)

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           S   K  +LD+  N +  +GA  +A+ I   ++L+ + L  NDIG  G E +ADAL +N 
Sbjct: 164 SSNNKYTILDLSGNRLLDEGACFIAKLISVNRTLVHVGLRSNDIGHIGGEALADALLENN 223

Query: 416 TITTIDLG------GNNIHSKGASAIARVLKDNSVI------------------------ 445
           TI ++D+G      GN+I ++GA AI  VLK N V+                        
Sbjct: 224 TIISLDVGAHSGINGNHIATEGAKAIGNVLKSNKVLAKLNLGCNGLGHAGISHIASGLDG 283

Query: 446 ----TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV-----ADMLR 496
               T LD++ N +G +GAK +++VL+    I  L L    +  SG   +     A +  
Sbjct: 284 NESLTHLDISVNNLGYEGAKIIADVLE-SSCITHLSLQRNNLTDSGGMVIFRAIAAAVEN 342

Query: 497 YNNTISILDLRANGLRDEGAK--------------------CLAQSFKVVNEALTS---- 532
             + I  L++ +N L    AK                    C   + K + E L      
Sbjct: 343 GEDRIEFLNIESNDLSTNSAKAIQKVLTVSSALKQLRISLNCFGSASKFILEGLAENKGL 402

Query: 533 ------------------------------IDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
                                         +DL+ N++RD     IA+ALK N+   + S
Sbjct: 403 KSLHMASCEIRETDGQPFVTGLSTNATLQHLDLSRNKLRDAATICIAEALKTNK--GLVS 460

Query: 563 LNLANNFLTKFGQSAL 578
           L+L+ N +   G SA+
Sbjct: 461 LDLSCNNIMDEGGSAI 476



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 5/174 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + +S   FG    F L E L  N+  + +  A+  I     + F   L +N  L+ 
Sbjct: 374 ALKQLRISLNCFGSASKFIL-EGLAENKGLKSLHMASCEIRETDGQPFVTGLSTNATLQH 432

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N + D    C+ + L  N G+  L LS  ++ DEG  AIA  LK+NS LR L L 
Sbjct: 433 LDLSRNKLRDAATICIAEALKTNKGLVSLDLSCNNIMDEGGSAIAMFLKSNSTLRELRLR 492

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGN---YGGALGANA-LAKGLEGNKSL 332
            N +       L E L  N+++ ++ +  N   Y   LG  A LA+  E NK L
Sbjct: 493 RNCMSNVTGDLLDEQLRSNTSLENMDITYNDFRYKCLLGIRATLARNAETNKGL 546



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 85/190 (44%), Gaps = 30/190 (15%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG------------DEGVKCL-- 238
           E ++  +N ++    KA   VL  + ALK L +S N  G            ++G+K L  
Sbjct: 348 EFLNIESNDLSTNSAKAIQKVLTVSSALKQLRISLNCFGSASKFILEGLAENKGLKSLHM 407

Query: 239 --CDI-----------LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             C+I           L  NA ++ L LS   LRD     IAE LK N  L  L+L+ N 
Sbjct: 408 ASCEIRETDGQPFVTGLSTNATLQHLDLSRNKLRDAATICIAEALKTNKGLVSLDLSCNN 467

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I   G +++A  L  NST+R L L  N    +  + L + L  N SL  + +  N    +
Sbjct: 468 IMDEGGSAIAMFLKSNSTLRELRLRRNCMSNVTGDLLDEQLRSNTSLENMDITYNDFRYK 527

Query: 346 ---GIRALMS 352
              GIRA ++
Sbjct: 528 CLLGIRATLA 537


>gi|320164729|gb|EFW41628.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 255

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/250 (40%), Positives = 141/250 (56%), Gaps = 6/250 (2%)

Query: 257 DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
           ++ D GA+AIAE LK N+ +  L L  N I  +G  ++AE L  N+T+  L L  N    
Sbjct: 9   EIGDAGARAIAEALKVNATVTTLALGKNQIGDAGARTIAETLKVNTTLTQLFLQRNQIRE 68

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            G NA+A+ L+ N S+  L L  N IGD G RA+   L +    L  L++  N I    A
Sbjct: 69  GGMNAIAEALKVNASVTALGLGDNQIGDAGARAIAETLRANT-TLTWLNLCQNQIGDAAA 127

Query: 377 FHVAEYIKNCKSLLWINLYMNDI--GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
             +AE +K   +L    LY+ DI  G+ GA+ IA+ALK N T+TT+DL  N I   GA A
Sbjct: 128 QAIAEALKVNTTL--TKLYLLDIQIGEAGAKAIAEALKVNATVTTLDLDKNQIGDAGAQA 185

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N+ +T L L  N IG  GA+A++E LK +  +  L L   +IG  GA+ +A+ 
Sbjct: 186 IAEALKVNTTVTRLYLWLNLIGDAGAQAIAEALKVNTTLTVLNLS-KKIGDIGAQAIAEA 244

Query: 495 LRYNNTISIL 504
           L+ N T++ L
Sbjct: 245 LKVNTTLTWL 254



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 128/230 (55%), Gaps = 2/230 (0%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E  L    IGD G RA+   L      +  L +G N I   GA  +AE +K   +L  + 
Sbjct: 2   EDSLPEEEIGDAGARAIAEALKVN-ATVTTLALGKNQIGDAGARTIAETLKVNTTLTQLF 60

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N I + G   IA+ALK N ++T + LG N I   GA AIA  L+ N+ +T L+L  N
Sbjct: 61  LQRNQIREGGMNAIAEALKVNASVTALGLGDNQIGDAGARAIAETLRANTTLTWLNLCQN 120

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG   A+A++E LK +  +  L L   QIG +GA+ +A+ L+ N T++ LDL  N + D
Sbjct: 121 QIGDAAAQAIAEALKVNTTLTKLYLLDIQIGEAGAKAIAEALKVNATVTTLDLDKNQIGD 180

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
            GA+ +A++ K VN  +T + L  N I D GA AIA+ALK N  + V +L
Sbjct: 181 AGAQAIAEALK-VNTTVTRLYLWLNLIGDAGAQAIAEALKVNTTLTVLNL 229



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/241 (39%), Positives = 135/241 (56%), Gaps = 3/241 (1%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A+A+ L+ N ++  L L  N IGD G R +   L      L  L +  N I   
Sbjct: 11  GDAGARAIAEALKVNATVTTLALGKNQIGDAGARTIAETLKVNT-TLTQLFLQRNQIREG 69

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   +AE +K   S+  + L  N IGD GA  IA+ L+ N T+T ++L  N I    A A
Sbjct: 70  GMNAIAEALKVNASVTALGLGDNQIGDAGARAIAETLRANTTLTWLNLCQNQIGDAAAQA 129

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N+ +T L L    IG  GAKA++E LK +  + TL L   QIG +GA+ +A+ 
Sbjct: 130 IAEALKVNTTLTKLYLLDIQIGEAGAKAIAEALKVNATVTTLDLDKNQIGDAGAQAIAEA 189

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L+ N T++ L L  N + D GA+ +A++ KV N  LT ++L+  +I D GA AIA+ALK 
Sbjct: 190 LKVNTTVTRLYLWLNLIGDAGAQAIAEALKV-NTTLTVLNLS-KKIGDIGAQAIAEALKV 247

Query: 555 N 555
           N
Sbjct: 248 N 248



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 100/275 (36%), Positives = 139/275 (50%), Gaps = 34/275 (12%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG +A    L+ N  + TL L  N IG                            D GA+
Sbjct: 13  AGARAIAEALKVNATVTTLALGKNQIG----------------------------DAGAR 44

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            IAE LK N+ L  L L  N I   G  ++AEAL  N+++ +L L  N  G  GA A+A+
Sbjct: 45  TIAETLKVNTTLTQLFLQRNQIREGGMNAIAEALKVNASVTALGLGDNQIGDAGARAIAE 104

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGL--SSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            L  N +L  L+L  N IGD   +A+   L  ++   KL +LDI    I   GA  +AE 
Sbjct: 105 TLRANTTLTWLNLCQNQIGDAAAQAIAEALKVNTTLTKLYLLDI---QIGEAGAKAIAEA 161

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K   ++  ++L  N IGD GA+ IA+ALK N T+T + L  N I   GA AIA  LK N
Sbjct: 162 LKVNATVTTLDLDKNQIGDAGAQAIAEALKVNTTVTRLYLWLNLIGDAGAQAIAEALKVN 221

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           + +T L+L+   IG  GA+A++E LK +  +  LK
Sbjct: 222 TTLTVLNLS-KKIGDIGAQAIAEALKVNTTLTWLK 255



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 111/212 (52%), Gaps = 31/212 (14%)

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           +IGD GA  IA+ALK N T+TT+ LG N I   GA  IA  LK N+ +T L L  N I  
Sbjct: 9   EIGDAGARAIAEALKVNATVTTLALGKNQIGDAGARTIAETLKVNTTLTQLFLQRNQIRE 68

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE--- 514
            G  A++E LK + ++  L LG  QIG +GA  +A+ LR N T++ L+L  N + D    
Sbjct: 69  GGMNAIAEALKVNASVTALGLGDNQIGDAGARAIAETLRANTTLTWLNLCQNQIGDAAAQ 128

Query: 515 -------------------------GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
                                    GAK +A++ K VN  +T++DL  N+I D GA AIA
Sbjct: 129 AIAEALKVNTTLTKLYLLDIQIGEAGAKAIAEALK-VNATVTTLDLDKNQIGDAGAQAIA 187

Query: 550 QALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           +ALK N    VT L L  N +   G  A+ +A
Sbjct: 188 EALKVN--TTVTRLYLWLNLIGDAGAQAIAEA 217



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 133/275 (48%), Gaps = 30/275 (10%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE+L  N T   ++   N I  AG +     L+ N  L  L L  N I + 
Sbjct: 10  IGDAGARAIAEALKVNATVTTLALGKNQIGDAGARTIAETLKVNTTLTQLFLQRNQIREG 69

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G+  + + L  NA V  L L    + D GA+AIAE L+ N+ L  L L  N I  +   +
Sbjct: 70  GMNAIAEALKVNASVTALGLGDNQIGDAGARAIAETLRANTTLTWLNLCQNQIGDAAAQA 129

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AEAL  N+T+  L+L     G  GA A+A+ L+ N ++  L L  N IGD G +A    
Sbjct: 130 IAEALKVNTTLTKLYLLDIQIGEAGAKAIAEALKVNATVTTLDLDKNQIGDAGAQA---- 185

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
                                    +AE +K   ++  + L++N IGD GA+ IA+ALK 
Sbjct: 186 -------------------------IAEALKVNTTVTRLYLWLNLIGDAGAQAIAEALKV 220

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           N T+T ++L    I   GA AIA  LK N+ +T L
Sbjct: 221 NTTLTVLNL-SKKIGDIGAQAIAEALKVNTTLTWL 254



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 122/249 (48%), Gaps = 31/249 (12%)

Query: 171 GRN-FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP 229
           G+N  GD G   +AE+L  N T  ++    N I   G+ A    L+ N ++  L L  N 
Sbjct: 34  GKNQIGDAGARTIAETLKVNTTLTQLFLQRNQIREGGMNAIAEALKVNASVTALGLGDNQ 93

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IGD G + + + L  N  +  L L    + D  A+AIAE LK N+ L  L L +  I  +
Sbjct: 94  IGDAGARAIAETLRANTTLTWLNLCQNQIGDAAAQAIAEALKVNTTLTKLYLLDIQIGEA 153

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++AEAL  N+T+ +L L+ N  G  GA A+A+ L+ N ++  L+L  N IGD G +A
Sbjct: 154 GAKAIAEALKVNATVTTLDLDKNQIGDAGAQAIAEALKVNTTVTRLYLWLNLIGDAGAQA 213

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
                                        +AE +K   +L  +NL    IGD GA+ IA+
Sbjct: 214 -----------------------------IAEALKVNTTLTVLNLS-KKIGDIGAQAIAE 243

Query: 410 ALKQNRTIT 418
           ALK N T+T
Sbjct: 244 ALKVNTTLT 252



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G+ G   +AE+L  N T   +    N I  AG +A    L+ N  +  L L  N IGD 
Sbjct: 150 IGEAGAKAIAEALKVNATVTTLDLDKNQIGDAGAQAIAEALKVNTTVTRLYLWLNLIGDA 209

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           G + + + L  N  +  L LS   + D GA+AIAE LK N+ L  L+
Sbjct: 210 GAQAIAEALKVNTTLTVLNLSK-KIGDIGAQAIAEALKVNTTLTWLK 255


>gi|320170054|gb|EFW46953.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 755

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 158/281 (56%), Gaps = 4/281 (1%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           + A  IAE LK N  L+ LEL++N I  +G  ++  AL   ST+ +L LN N    +GA 
Sbjct: 30  DDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRNKSTLIALSLNENKISDIGAF 89

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           A+A+GL+ + +L +L +  N IGD G RA+ S L + K  LA L +  N I   GA  +A
Sbjct: 90  AVAEGLQASTALTQLGMSVNQIGDAGARAIGSVLRN-KANLARLYLSQNKIGDAGARAIA 148

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           E ++   +L  + ++ N IGD+GA+ I  AL+    ++ + L  N I   GA AIA  LK
Sbjct: 149 EGLQTSTALTDLRMFENQIGDDGAQAIGAALRTKANLSLLYLSQNKIGDAGARAIAEGLK 208

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
             +V+T   +  N IG  GA+A+   L+   N+++L L   +IG  GA  +A+ ++  + 
Sbjct: 209 TLTVLTDFRMFENQIGDAGAQAIGAALRNKTNLSSLYLSENKIGDIGACAIAEGVQAASA 268

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEA-LTSIDLAFNEI 540
           ++ L +  N + D GA+ +  + +  N+A L+ ++L  N+I
Sbjct: 269 LTELGMSTNQIGDAGAQAIGAALR--NKANLSKLNLWDNQI 307



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 139/257 (54%), Gaps = 4/257 (1%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+GL+ N +L+ L L  N IGD G +A+ S L + K  L  L +  N IS  GAF VAE
Sbjct: 35  IAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRN-KSTLIALSLNENKISDIGAFAVAE 93

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            ++   +L  + + +N IGD GA  I   L+    +  + L  N I   GA AIA  L+ 
Sbjct: 94  GLQASTALTQLGMSVNQIGDAGARAIGSVLRNKANLARLYLSQNKIGDAGARAIAEGLQT 153

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           ++ +T L +  N IG DGA+A+   L+   N++ L L   +IG +GA  +A+ L+    +
Sbjct: 154 STALTDLRMFENQIGDDGAQAIGAALRTKANLSLLYLSQNKIGDAGARAIAEGLKTLTVL 213

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           +   +  N + D GA+ +  + +     L+S+ L+ N+I D GA AIA+ ++A    A+T
Sbjct: 214 TDFRMFENQIGDAGAQAIGAALRNKTN-LSSLYLSENKIGDIGACAIAEGVQAAS--ALT 270

Query: 562 SLNLANNFLTKFGQSAL 578
            L ++ N +   G  A+
Sbjct: 271 ELGMSTNQIGDAGAQAI 287



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 1/271 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S    GD G   +  +L    T   +S   N I+  G  A    LQ++ AL  L +S
Sbjct: 48  LELSDNQIGDAGAQAIGSALRNKSTLIALSLNENKISDIGAFAVAEGLQASTALTQLGMS 107

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD G + +  +L + A + RL LS   + D GA+AIAE L+ ++ L  L +  N I
Sbjct: 108 VNQIGDAGARAIGSVLRNKANLARLYLSQNKIGDAGARAIAEGLQTSTALTDLRMFENQI 167

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  ++  AL   + +  L+L+ N  G  GA A+A+GL+    L +  +  N IGD G
Sbjct: 168 GDDGAQAIGAALRTKANLSLLYLSQNKIGDAGARAIAEGLKTLTVLTDFRMFENQIGDAG 227

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            +A+ + L + K  L+ L +  N I   GA  +AE ++   +L  + +  N IGD GA+ 
Sbjct: 228 AQAIGAALRN-KTNLSSLYLSENKIGDIGACAIAEGVQAASALTELGMSTNQIGDAGAQA 286

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           I  AL+    ++ ++L  N I S     +++
Sbjct: 287 IGAALRNKANLSKLNLWDNQISSSAVQLLSK 317



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 155/337 (45%), Gaps = 31/337 (9%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  ++ ++ S V  SG    D     +AE L  N   + +  + N I  AG +A    L+
Sbjct: 11  ELFEKAKSSSRVIRSGITHDDA--LVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALR 68

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +   L  L+L+ N I D G   + + L  +  + +L +S   + D GA+AI  +L+N + 
Sbjct: 69  NKSTLIALSLNENKISDIGAFAVAEGLQASTALTQLGMSVNQIGDAGARAIGSVLRNKAN 128

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L L+ N I  +G  ++AE L  ++ +  L +  N  G  GA A+   L    +L  L
Sbjct: 129 LARLYLSQNKIGDAGARAIAEGLQTSTALTDLRMFENQIGDDGAQAIGAALRTKANLSLL 188

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L  N IGD G RA                             +AE +K    L    ++
Sbjct: 189 YLSQNKIGDAGARA-----------------------------IAEGLKTLTVLTDFRMF 219

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IGD GA+ I  AL+    ++++ L  N I   GA AIA  ++  S +T L ++ N I
Sbjct: 220 ENQIGDAGAQAIGAALRNKTNLSSLYLSENKIGDIGACAIAEGVQAASALTELGMSTNQI 279

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
           G  GA+A+   L+   N++ L L   QI +S  + ++
Sbjct: 280 GDAGAQAIGAALRNKANLSKLNLWDNQISSSAVQLLS 316



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 121/232 (52%), Gaps = 3/232 (1%)

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
           G L  L++ +N I   GA  +   ++N  +L+ ++L  N I D GA  +A+ L+ +  +T
Sbjct: 43  GNLQYLELSDNQIGDAGAQAIGSALRNKSTLIALSLNENKISDIGAFAVAEGLQASTALT 102

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            + +  N I   GA AI  VL++ + +  L L+ N IG  GA+A++E L+    +  L++
Sbjct: 103 QLGMSVNQIGDAGARAIGSVLRNKANLARLYLSQNKIGDAGARAIAEGLQTSTALTDLRM 162

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
              QIG  GA+ +   LR    +S+L L  N + D GA+ +A+  K +   LT   +  N
Sbjct: 163 FENQIGDDGAQAIGAALRTKANLSLLYLSQNKIGDAGARAIAEGLKTLT-VLTDFRMFEN 221

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
           +I D GA AI  AL+   +  ++SL L+ N +   G  A+ +       ++E
Sbjct: 222 QIGDAGAQAIGAALRNKTN--LSSLYLSENKIGDIGACAIAEGVQAASALTE 271



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 102/183 (55%), Gaps = 1/183 (0%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I+   A  +AE +K   +L ++ L  N IGD GA+ I  AL+   T+  + L  N I   
Sbjct: 27  ITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRNKSTLIALSLNENKISDI 86

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA A+A  L+ ++ +T L ++ N IG  GA+A+  VL+   N+  L L   +IG +GA  
Sbjct: 87  GAFAVAEGLQASTALTQLGMSVNQIGDAGARAIGSVLRNKANLARLYLSQNKIGDAGARA 146

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           +A+ L+ +  ++ L +  N + D+GA+ +  + +     L+ + L+ N+I D GA AIA+
Sbjct: 147 IAEGLQTSTALTDLRMFENQIGDDGAQAIGAALR-TKANLSLLYLSQNKIGDAGARAIAE 205

Query: 551 ALK 553
            LK
Sbjct: 206 GLK 208



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 61/130 (46%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GD G   +AE L       +     N I  AG +A    L++   L +L LS N
Sbjct: 190 LSQNKIGDAGARAIAEGLKTLTVLTDFRMFENQIGDAGAQAIGAALRNKTNLSSLYLSEN 249

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G   + + +   + +  L +S+  + D GA+AI   L+N + L  L L +N I  
Sbjct: 250 KIGDIGACAIAEGVQAASALTELGMSTNQIGDAGAQAIGAALRNKANLSKLNLWDNQISS 309

Query: 289 SGFTSLAEAL 298
           S    L++++
Sbjct: 310 SAVQLLSKSV 319


>gi|290997932|ref|XP_002681535.1| predicted protein [Naegleria gruberi]
 gi|284095159|gb|EFC48791.1| predicted protein [Naegleria gruberi]
          Length = 448

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 219/434 (50%), Gaps = 84/434 (19%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAE-------SLGYNQTAEE-------------V 195
           +F  E++  +S+D+ G   GDEG  +++E       ++  N+  +E             +
Sbjct: 44  KFISEMKQLTSLDIGGNEIGDEGSKYISEMKQLTSLNIDNNRIGDEGAKSISEMKQLTSL 103

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S   N I   G K+   + Q    L +L++SGN IGD+GVK + ++      ++ L +  
Sbjct: 104 SINNNEIGVEGAKSISEMKQ----LTSLDISGNGIGDKGVKFISEM----KQLKLLDIGG 155

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            ++ DEG+K I+E+ +    L  L +  N I   G  S++E       + SL +  N  G
Sbjct: 156 NEIGDEGSKYISEMKQ----LTSLNIGENRIGDEGVKSISEM----KQLTSLSIYNNRIG 207

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA ++++     K L  L + GN IGD+G++++     S   +L  LDI  N I  +G
Sbjct: 208 DEGAKSISE----MKQLTSLDISGNGIGDKGVKSI-----SEMKQLTSLDISGNGIGDEG 258

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  ++E     K L  +++  N+IGDEG++ I++     + +T++++  N I  +G  +I
Sbjct: 259 AKFISE----MKQLKLLDIGGNEIGDEGSKYISEM----KQLTSLNIYNNEIGVEGVKSI 310

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           + + +    +TSL +  N IG +G K++SE+ +      +L + + +IG  G +F+++M 
Sbjct: 311 SEMKQ----LTSLYIYNNQIGVEGVKSISEMKQLK----SLNICYNEIGDKGVKFISEMK 362

Query: 496 RYNNTISILDLRANGLRDEGAKCL-----------------AQSFKVVNE--ALTSIDLA 536
           +    IS L++  NG+ DEG K +                 A+  K ++E   LTS+D+ 
Sbjct: 363 QL---IS-LNIGGNGIGDEGVKSISEMKQLTSLNISKNRIGAEGSKFISEMKQLTSLDIC 418

Query: 537 FNEIRDDGAFAIAQ 550
           +NEI  +G  +I++
Sbjct: 419 YNEIGGEGVKSISE 432



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 205/426 (48%), Gaps = 100/426 (23%)

Query: 220 LKTLNLSGNPIGDEGVKCLC--------DILVDNAGV-------ERLQLSSVD-----LR 259
           LK L++  N IGDEG K +         DI     G        E  QL+S+D     + 
Sbjct: 4   LKLLDIGENQIGDEGAKSISEMKQLTSLDICYSRIGAEGAKFISEMKQLTSLDIGGNEIG 63

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEG+K I+E+ +    L  L ++NN I   G  S++E       + SL +N N  G  GA
Sbjct: 64  DEGSKYISEMKQ----LTSLNIDNNRIGDEGAKSISEM----KQLTSLSINNNEIGVEGA 115

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            ++++     K L  L + GN IGD+G++ +     S   +L +LDIG N I  +G+ ++
Sbjct: 116 KSISE----MKQLTSLDISGNGIGDKGVKFI-----SEMKQLKLLDIGGNEIGDEGSKYI 166

Query: 380 AEY--------------------IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           +E                     I   K L  +++Y N IGDEGA+ I++     + +T+
Sbjct: 167 SEMKQLTSLNIGENRIGDEGVKSISEMKQLTSLSIYNNRIGDEGAKSISEM----KQLTS 222

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +D+ GN I  KG  +I+ + +    +TSLD++ N IG +GAK +SE+ +       L +G
Sbjct: 223 LDISGNGIGDKGVKSISEMKQ----LTSLDISGNGIGDEGAKFISEMKQLK----LLDIG 274

Query: 480 WCQIGASGAEFVADMLR------YNNTISILDLRA--------------NGLRDEGAKCL 519
             +IG  G++++++M +      YNN I +  +++              N +  EG K +
Sbjct: 275 GNEIGDEGSKYISEMKQLTSLNIYNNEIGVEGVKSISEMKQLTSLYIYNNQIGVEGVKSI 334

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
           ++      + L S+++ +NEI D G   I++  +      + SLN+  N +   G  +++
Sbjct: 335 SEM-----KQLKSLNICYNEIGDKGVKFISEMKQ------LISLNIGGNGIGDEGVKSIS 383

Query: 580 DAKDLV 585
           + K L 
Sbjct: 384 EMKQLT 389



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 170/336 (50%), Gaps = 67/336 (19%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAE-------SLGYNQTAEE-------------V 195
           +F  E++    +D+ G   GDEG  +++E       ++G N+  +E             +
Sbjct: 140 KFISEMKQLKLLDIGGNEIGDEGSKYISEMKQLTSLNIGENRIGDEGVKSISEMKQLTSL 199

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S   N I   G K+   + Q    L +L++SGN IGD+GVK +          E  QL+S
Sbjct: 200 SIYNNRIGDEGAKSISEMKQ----LTSLDISGNGIGDKGVKSIS---------EMKQLTS 246

Query: 256 VDLR-----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           +D+      DEGAK I+E+ +    L++L++  N I   G   ++E       + SL++ 
Sbjct: 247 LDISGNGIGDEGAKFISEMKQ----LKLLDIGGNEIGDEGSKYISEM----KQLTSLNIY 298

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G  G  ++++     K L  L+++ N IG EG++++     S   +L  L+I  N 
Sbjct: 299 NNEIGVEGVKSISE----MKQLTSLYIYNNQIGVEGVKSI-----SEMKQLKSLNICYNE 349

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I  KG   ++E     K L+ +N+  N IGDEG + I++     + +T++++  N I ++
Sbjct: 350 IGDKGVKFISE----MKQLISLNIGGNGIGDEGVKSISEM----KQLTSLNISKNRIGAE 401

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           G+  I+ + +    +TSLD+ YN IG +G K++SE+
Sbjct: 402 GSKFISEMKQ----LTSLDICYNEIGGEGVKSISEM 433



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 127/226 (56%), Gaps = 31/226 (13%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           +L +LDIG N I  +GA  ++E     K L  +++  + IG EGA+ I++     + +T+
Sbjct: 3   QLKLLDIGENQIGDEGAKSISE----MKQLTSLDICYSRIGAEGAKFISEM----KQLTS 54

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +D+GGN I  +G+  I+ + +    +TSL++  N IG +GAK++SE+ +      +L + 
Sbjct: 55  LDIGGNEIGDEGSKYISEMKQ----LTSLNIDNNRIGDEGAKSISEMKQL----TSLSIN 106

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
             +IG  GA+ +++M +    ++ LD+  NG+ D+G K +++      + L  +D+  NE
Sbjct: 107 NNEIGVEGAKSISEMKQ----LTSLDISGNGIGDKGVKFISEM-----KQLKLLDIGGNE 157

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
           I D+G+  I++  +      +TSLN+  N +   G  ++++ K L 
Sbjct: 158 IGDEGSKYISEMKQ------LTSLNIGENRIGDEGVKSISEMKQLT 197



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 99/170 (58%), Gaps = 23/170 (13%)

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           + +  +D+G N I  +GA +I+ + +    +TSLD+ Y+ IGA+GAK +SE+ +      
Sbjct: 2   KQLKLLDIGENQIGDEGAKSISEMKQ----LTSLDICYSRIGAEGAKFISEMKQL----T 53

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
           +L +G  +IG  G++++++M +    ++ L++  N + DEGAK +++      + LTS+ 
Sbjct: 54  SLDIGGNEIGDEGSKYISEMKQ----LTSLNIDNNRIGDEGAKSISEM-----KQLTSLS 104

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           +  NEI  +GA +I++  +      +TSL+++ N +   G   +++ K L
Sbjct: 105 INNNEIGVEGAKSISEMKQ------LTSLDISGNGIGDKGVKFISEMKQL 148


>gi|320163559|gb|EFW40458.1| NOD3 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 416

 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 127/228 (55%), Gaps = 11/228 (4%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L    L D  A+A+AE LK N++          I  +G  ++AEAL  N T++ L+L 
Sbjct: 19  LSLQREQLGDAEAQAVAEALKENTV----------IGDAGAKAIAEALRLNKTLQHLYLQ 68

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G  GA A+A+ L  N +L  L+L+ N +GD G +A+   L+   G LA L +G N 
Sbjct: 69  QNQIGDDGALAIAQTLRVNTTLHTLYLNDNQLGDGGAQAIAEALTV-NGTLATLSLGENQ 127

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I   GA   A+ +K  K+L  ++L  N IGD GA+ IA+ALK N T+T      N +   
Sbjct: 128 IGDAGARATADALKVNKALTELHLSGNQIGDAGAQAIAEALKLNTTLTQFYFYKNQVGDA 187

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           GA AIA  LK NS +T ++L  N IG  GA+A++E LK +  +  LKL
Sbjct: 188 GAQAIAEALKVNSSLTEVNLDTNQIGDAGAQAIAEALKVNTTLTALKL 235



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 120/234 (51%), Gaps = 29/234 (12%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IGD G K + + L  N  ++ L L    + D+GA AIA+ L+ N+ L  L LN+N +   
Sbjct: 44  IGDAGAKAIAEALRLNKTLQHLYLQQNQIGDDGALAIAQTLRVNTTLHTLYLNDNQLGDG 103

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++AEAL  N T+ +L L  N  G  GA A A  L+ NK+L ELHL GN IGD G +A
Sbjct: 104 GAQAIAEALTVNGTLATLSLGENQIGDAGARATADALKVNKALTELHLSGNQIGDAGAQA 163

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
                                        +AE +K   +L     Y N +GD GA+ IA+
Sbjct: 164 -----------------------------IAEALKLNTTLTQFYFYKNQVGDAGAQAIAE 194

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           ALK N ++T ++L  N I   GA AIA  LK N+ +T+L L  N I   G +A+
Sbjct: 195 ALKVNSSLTEVNLDTNQIGDAGAQAIAEALKVNTTLTALKLNNNCISDVGVQAI 248



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/251 (35%), Positives = 133/251 (52%), Gaps = 14/251 (5%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L L    +GD   +A+   L             N  I   GA  +AE ++  K+L  +
Sbjct: 17  RYLSLQREQLGDAEAQAVAEALKE-----------NTVIGDAGAKAIAEALRLNKTLQHL 65

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L  N IGD+GA  IA  L+ N T+ T+ L  N +   GA AIA  L  N  + +L L  
Sbjct: 66  YLQQNQIGDDGALAIAQTLRVNTTLHTLYLNDNQLGDGGAQAIAEALTVNGTLATLSLGE 125

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+A ++ LK +  +  L L   QIG +GA+ +A+ L+ N T++      N + 
Sbjct: 126 NQIGDAGARATADALKVNKALTELHLSGNQIGDAGAQAIAEALKLNTTLTQFYFYKNQVG 185

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           D GA+ +A++ KV N +LT ++L  N+I D GA AIA+ALK N    +T+L L NN ++ 
Sbjct: 186 DAGAQAIAEALKV-NSSLTEVNLDTNQIGDAGAQAIAEALKVN--TTLTALKLNNNCISD 242

Query: 573 FGQSALTDAKD 583
            G  A+  A++
Sbjct: 243 VGVQAIDGARN 253



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 138/272 (50%), Gaps = 40/272 (14%)

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           R L L    +  +   ++AEAL EN+ I          G  GA A+A+ L  NK+L+ L+
Sbjct: 17  RYLSLQREQLGDAEAQAVAEALKENTVI----------GDAGAKAIAEALRLNKTLQHLY 66

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N IGD+G                             A  +A+ ++   +L  + L  
Sbjct: 67  LQQNQIGDDG-----------------------------ALAIAQTLRVNTTLHTLYLND 97

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N +GD GA+ IA+AL  N T+ T+ LG N I   GA A A  LK N  +T L L+ N IG
Sbjct: 98  NQLGDGGAQAIAEALTVNGTLATLSLGENQIGDAGARATADALKVNKALTELHLSGNQIG 157

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             GA+A++E LK +  +        Q+G +GA+ +A+ L+ N++++ ++L  N + D GA
Sbjct: 158 DAGAQAIAEALKLNTTLTQFYFYKNQVGDAGAQAIAEALKVNSSLTEVNLDTNQIGDAGA 217

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           + +A++ K VN  LT++ L  N I D G  AI
Sbjct: 218 QAIAEALK-VNTTLTALKLNNNCISDVGVQAI 248



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 102/202 (50%), Gaps = 1/202 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE+L  N+T + +    N I   G  A    L+ N  L TL L+ N +GD 
Sbjct: 44  IGDAGAKAIAEALRLNKTLQHLYLQQNQIGDDGALAIAQTLRVNTTLHTLYLNDNQLGDG 103

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  +  L L    + D GA+A A+ LK N  L  L L+ N I  +G  +
Sbjct: 104 GAQAIAEALTVNGTLATLSLGENQIGDAGARATADALKVNKALTELHLSGNQIGDAGAQA 163

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AEAL  N+T+   +   N  G  GA A+A+ L+ N SL E++L  N IGD G +A+   
Sbjct: 164 IAEALKLNTTLTQFYFYKNQVGDAGAQAIAEALKVNSSLTEVNLDTNQIGDAGAQAIAEA 223

Query: 354 LSSRKGKLAVLDIGNNSISAKG 375
           L      L  L + NN IS  G
Sbjct: 224 LKVNT-TLTALKLNNNCISDVG 244



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 96/189 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +    + +     GD+G   +A++L  N T   +    N +   G +A    L  N  L 
Sbjct: 60  KTLQHLYLQQNQIGDDGALAIAQTLRVNTTLHTLYLNDNQLGDGGAQAIAEALTVNGTLA 119

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL+L  N IGD G +   D L  N  +  L LS   + D GA+AIAE LK N+ L     
Sbjct: 120 TLSLGENQIGDAGARATADALKVNKALTELHLSGNQIGDAGAQAIAEALKLNTTLTQFYF 179

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N +  +G  ++AEAL  NS++  ++L+ N  G  GA A+A+ L+ N +L  L L+ N 
Sbjct: 180 YKNQVGDAGAQAIAEALKVNSSLTEVNLDTNQIGDAGAQAIAEALKVNTTLTALKLNNNC 239

Query: 342 IGDEGIRAL 350
           I D G++A+
Sbjct: 240 ISDVGVQAI 248


>gi|83747318|ref|ZP_00944359.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
 gi|207739111|ref|YP_002257504.1| type III effector protein gala2 [Ralstonia solanacearum IPO1609]
 gi|83726018|gb|EAP73155.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
 gi|206592484|emb|CAQ59390.1| type III effector protein gala2 [Ralstonia solanacearum IPO1609]
          Length = 978

 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 138/441 (31%), Positives = 214/441 (48%), Gaps = 66/441 (14%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           LSG TG    E+   L   A+      S+D+SG   GD  +  LA S         ++ +
Sbjct: 581 LSGCTGSAVSEAG--LAVLAR--LPLESLDLSGTRIGDREVQALASSTSLT----SLNLS 632

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I  AG +A    L  N  L  LN+S NPIGD GV+ L D    +  +  L+L  + +
Sbjct: 633 GNRIGNAGAQA----LGRNTVLTALNVSANPIGDAGVQALAD----SRSLTSLELRGIGI 684

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            + G  A+A    +N++LR L++++N +       LA     N T+ SL  N     A G
Sbjct: 685 GEAGIAALA----SNTVLRSLDISSNDLSEQSAAELAR----NQTLASLKAN-----ACG 731

Query: 319 -ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
             N++A+ L   +SLR L +  NSIGD G+ A+     +R   L  L++ +N I+ +G  
Sbjct: 732 LTNSMAQQLARIRSLRTLEVGSNSIGDTGVLAI-----ARNASLRTLNLSHNPITLQGL- 785

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
                ++  ++L  +++     GD GA      L +NR +T++ LG N I S GA  +A 
Sbjct: 786 ---RPLELSRTLTSLDVSGIGCGDRGALL----LSKNRALTSLKLGFNGIGSAGAQGLAA 838

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
               N  + SLDL  N I  D AKAL+      G + +L +  C++    A  +A+ L  
Sbjct: 839 ----NRTLISLDLRGNTIDVDAAKALANT----GCLTSLNVSDCKLDDEAASALAESL-- 888

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
             T++ LD+  N L  + A+ LA      N  LTS++++ N I  DGA A+A      E 
Sbjct: 889 --TLTSLDVSVNRLSGQAARALAG-----NATLTSLNISHNHIGPDGAQALA------ES 935

Query: 558 VAVTSLNLANNFLTKFGQSAL 578
            ++TSL+   N + + G  AL
Sbjct: 936 PSLTSLDARANGIGEAGARAL 956



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 125/296 (42%), Gaps = 79/296 (26%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSGNPIGDEGV 235
           EG F L +      T   +  +A      G K+F+ +   + + L++LN++G  IGD+G 
Sbjct: 114 EGNFTLQDLKALPATLRHLDLSA---CTGGAKSFEAIAYLAGLPLESLNVAGADIGDDG- 169

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
                                          A LL  N  LR L    N  +     + A
Sbjct: 170 -------------------------------ARLLAANPSLRAL----NAANGGIGAAGA 194

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
            AL E+  + SL L  N  G  GA ALA     ++SL  L +    + D G RAL     
Sbjct: 195 RALAESPVLASLDLTRNGIGDEGARALAD----SRSLTNLAVLNCLVTDVGARALAG--- 247

Query: 356 SRKGKLAVLDIGN------------------NSISAKGAFHVAEYIKNCKSLLWINLYMN 397
              G L  LD+GN                  N I+A+GA+ +A+     +SL  +++  N
Sbjct: 248 --NGTLTALDLGNLITETGNELEQAGYDRTANEITARGAWALAQN----RSLTSLSIQGN 301

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             GD G +    AL +NRT+T++++   ++    A+ +AR    N V+TSL + +N
Sbjct: 302 LCGDGGVQ----ALAKNRTLTSLNVAYTDMTPASATELAR----NPVLTSLSVRWN 349



 Score = 42.0 bits (97), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 83/193 (43%), Gaps = 42/193 (21%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S++++G + GD+G   LA        A     A N        A    L  +  L +L
Sbjct: 155 LESLNVAGADIGDDGARLLA--------ANPSLRALNAANGGIGAAGARALAESPVLASL 206

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+ N IGDEG + L D    +  +  L + +  + D GA+A+A     N  L  L+L N
Sbjct: 207 DLTRNGIGDEGARALAD----SRSLTNLAVLNCLVTDVGARALA----GNGTLTALDLGN 258

Query: 284 ------NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
                 N ++ +G+   A  +                 A GA ALA+    N+SL  L +
Sbjct: 259 LITETGNELEQAGYDRTANEIT----------------ARGAWALAQ----NRSLTSLSI 298

Query: 338 HGNSIGDEGIRAL 350
            GN  GD G++AL
Sbjct: 299 QGNLCGDGGVQAL 311



 Score = 42.0 bits (97), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 119/269 (44%), Gaps = 50/269 (18%)

Query: 330 KSLRELHLHGN--SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
           ++L ELH + N  S+  EG   L   L +    L  LD+   +  AK +F    Y+    
Sbjct: 97  RALGELHHYPNLTSLQLEGNFTLQD-LKALPATLRHLDLSACTGGAK-SFEAIAYLAGLP 154

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            L  +N+   DIGD+GA  +A     N ++  +    N  +    +A AR L ++ V+ S
Sbjct: 155 -LESLNVAGADIGDDGARLLA----ANPSLRAL----NAANGGIGAAGARALAESPVLAS 205

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL- 506
           LDL  N IG +GA+AL++      N+  L    C +   GA  +A     N T++ LDL 
Sbjct: 206 LDLTRNGIGDEGARALADSRSLT-NLAVLN---CLVTDVGARALAG----NGTLTALDLG 257

Query: 507 -----------------RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
                             AN +   GA  LAQ     N +LTS+ +  N   D G  A+A
Sbjct: 258 NLITETGNELEQAGYDRTANEITARGAWALAQ-----NRSLTSLSIQGNLCGDGGVQALA 312

Query: 550 QALKANEDVAVTSLNLANNFLTKFGQSAL 578
           +      +  +TSLN+A   +T    + L
Sbjct: 313 K------NRTLTSLNVAYTDMTPASATEL 335


>gi|342180279|emb|CCC89756.1| ribonuclease inhibitor-like protein [Trypanosoma congolense IL3000]
          Length = 742

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 181/365 (49%), Gaps = 15/365 (4%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F  ++ SN       L  + +G    + +  IL  N     L LS   L DEGA  IA+L
Sbjct: 126 FMELISSNCKGTFFCLRESGLGPMSAEAIAHILSSNTKYIVLDLSGNRLLDEGACLIAKL 185

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALA 323
           ++ N  L  + L +N I + G  +LA ALL+N+TI SL L      NGN+    GA A+ 
Sbjct: 186 IRINKTLVHVGLRSNDIGHVGGEALANALLQNNTIVSLDLGAHSGINGNHIATEGAKAIG 245

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L  NK L  L+L  N +G  GI  +  GL      L  LDI  N++   GA  +A+ +
Sbjct: 246 NVLRANKVLSHLNLSCNGLGHGGISFIAEGLDG-NCSLTHLDISVNNLGYMGAKVIADAL 304

Query: 384 KNCKSLLWINLYMNDIGDEGA----EKIADALKQNR-TITTIDLGGNNIHSKGASAIARV 438
           +NC ++  ++L  N++ D G     E I  A++     I  +++  N++  K A AI R+
Sbjct: 305 ENC-NITHLSLQRNNLTDSGGAVLFEAITAAVENGEDRIEYLNVESNDLGVKSAKAIQRM 363

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  +S +  L ++ N  G   +K + E L  +  + +L +  C I  +  +     L  N
Sbjct: 364 LGASSSMKQLRVSLNCFGP-SSKYIIEGLADNKGLQSLYMASCGIRETDGQPFTTGLAVN 422

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           +T+  LDL  N LRD    C+A++ K  N+ L ++DL+ N I D+G  AIA  LK N  +
Sbjct: 423 STLQHLDLSHNRLRDAATTCIAEAMK-SNKGLINLDLSCNNIMDEGGAAIAMFLKCNTSL 481

Query: 559 AVTSL 563
            V  L
Sbjct: 482 RVLKL 486



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 172/370 (46%), Gaps = 29/370 (7%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL- 225
           +D+SG    DEG   +A+ +  N+T   V   +N I   G +A    L  N  + +L+L 
Sbjct: 167 LDLSGNRLLDEGACLIAKLIRINKTLVHVGLRSNDIGHVGGEALANALLQNNTIVSLDLG 226

Query: 226 -----SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
                +GN I  EG K + ++L  N  +  L LS   L   G   IAE L  N  L  L+
Sbjct: 227 AHSGINGNHIATEGAKAIGNVLRANKVLSHLNLSCNGLGHGGISFIAEGLDGNCSLTHLD 286

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGN----YGGALGANALAKGLE-GNKSLREL 335
           ++ N + Y G   +A+A LEN  I  L L  N     GGA+   A+   +E G   +  L
Sbjct: 287 ISVNNLGYMGAKVIADA-LENCNITHLSLQRNNLTDSGGAVLFEAITAAVENGEDRIEYL 345

Query: 336 HLHGNSIGDEGIRAL--MSGLSSRKGKLAVLDIGNNSISAKG--AFHVAEYIKNCKSLLW 391
           ++  N +G +  +A+  M G SS   +L V      S++  G  + ++ E + + K L  
Sbjct: 346 NVESNDLGVKSAKAIQRMLGASSSMKQLRV------SLNCFGPSSKYIIEGLADNKGLQ- 398

Query: 392 INLYMNDIG--DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
            +LYM   G  +   +     L  N T+  +DL  N +     + IA  +K N  + +LD
Sbjct: 399 -SLYMASCGIRETDGQPFTTGLAVNSTLQHLDLSHNRLRDAATTCIAEAMKSNKGLINLD 457

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L+ N I  +G  A++  LK + ++  LKL    + +   + + + LR N TI  +D+  N
Sbjct: 458 LSCNNIMDEGGAAIAMFLKCNTSLRVLKLRRNCMSSVTGDLLDEQLRCNKTIEKMDVTYN 517

Query: 510 GLRDEGAKCL 519
             R    KCL
Sbjct: 518 DFR---YKCL 524



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 163/364 (44%), Gaps = 22/364 (6%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA------NGITAAGIKAFDGVLQ 215
           +    V +   + G  G   LA +L  N T   +   A      N I   G KA   VL+
Sbjct: 190 KTLVHVGLRSNDIGHVGGEALANALLQNNTIVSLDLGAHSGINGNHIATEGAKAIGNVLR 249

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +N  L  LNLS N +G  G+  + + L  N  +  L +S  +L   GAK IA+ L+N +I
Sbjct: 250 ANKVLSHLNLSCNGLGHGGISFIAEGLDGNCSLTHLDISVNNLGYMGAKVIADALENCNI 309

Query: 276 LRVLELNNNMIDYSGFTSLAEAL---LENSTIRSLHLN--GNYGGALGANALAKGLEGNK 330
             +    NN+ D SG   L EA+   +EN   R  +LN   N  G   A A+ + L  + 
Sbjct: 310 THLSLQRNNLTD-SGGAVLFEAITAAVENGEDRIEYLNVESNDLGVKSAKAIQRMLGASS 368

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           S+++L +  N  G    + ++ GL+  KG L  L + +  I           +    +L 
Sbjct: 369 SMKQLRVSLNCFGPSS-KYIIEGLADNKG-LQSLYMASCGIRETDGQPFTTGLAVNSTLQ 426

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L  N + D     IA+A+K N+ +  +DL  NNI  +G +AIA  LK N+ +  L L
Sbjct: 427 HLDLSHNRLRDAATTCIAEAMKSNKGLINLDLSCNNIMDEGGAAIAMFLKCNTSLRVLKL 486

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGW------CQIGASGAEFVADMLRYNNTISIL 504
             N + +     L E L+ +  I  + + +      C IG      +A     N  +++ 
Sbjct: 487 RRNCMSSVTGDLLDEQLRCNKTIEKMDVTYNDFRYKCLIGIRAT--LAKNAEANKALAVP 544

Query: 505 DLRA 508
            LRA
Sbjct: 545 KLRA 548



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 14/186 (7%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
           ++ E L  N+  + +  A+ GI     + F   L  N  L+ L+LS N + D    C+ +
Sbjct: 386 YIIEGLADNKGLQSLYMASCGIRETDGQPFTTGLAVNSTLQHLDLSHNRLRDAATTCIAE 445

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            +  N G+  L LS  ++ DEG  AIA  LK N+ LRVL+L  N +       L E L  
Sbjct: 446 AMKSNKGLINLDLSCNNIMDEGGAAIAMFLKCNTSLRVLKLRRNCMSSVTGDLLDEQLRC 505

Query: 301 NSTIRSLHLNGN---YGGALGANA-LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           N TI  + +  N   Y   +G  A LAK  E NK+L              +RA + GLS 
Sbjct: 506 NKTIEKMDVTYNDFRYKCLIGIRATLAKNAEANKAL----------AVPKLRAEVEGLSF 555

Query: 357 RKGKLA 362
           ++ +LA
Sbjct: 556 KEKELA 561



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 38/203 (18%)

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           NCK   +  L  + +G   AE IA  L  N     +DL GN +  +GA  IA++++ N  
Sbjct: 133 NCKGTFFC-LRESGLGPMSAEAIAHILSSNTKYIVLDLSGNRLLDEGACLIAKLIRINKT 191

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  + L  N IG  G +AL                            A+ L  NNTI  L
Sbjct: 192 LVHVGLRSNDIGHVGGEAL----------------------------ANALLQNNTIVSL 223

Query: 505 DLRA------NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           DL A      N +  EGAK +    +  N+ L+ ++L+ N +   G   IA+ L  N   
Sbjct: 224 DLGAHSGINGNHIATEGAKAIGNVLR-ANKVLSHLNLSCNGLGHGGISFIAEGLDGN--C 280

Query: 559 AVTSLNLANNFLTKFGQSALTDA 581
           ++T L+++ N L   G   + DA
Sbjct: 281 SLTHLDISVNNLGYMGAKVIADA 303


>gi|395861105|ref|XP_003802834.1| PREDICTED: ribonuclease inhibitor [Otolemur garnettii]
          Length = 487

 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 192/396 (48%), Gaps = 8/396 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +D+     GD G+  + ++L G   T +++S     +T AG      +L+S  +L+
Sbjct: 83  ALTELDLRTNELGDAGVRLVLQALQGPTCTIQKLSLQNCCLTEAGCGVLPSMLRSVPSLR 142

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+GD G+K LC+ L++    +E+LQL   +L     + +A +L+     + L 
Sbjct: 143 ELHLSDNPLGDAGLKLLCEGLLNPQCHLEKLQLEYCNLTAASCEFLASVLRAKPDFKELI 202

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN +  +G  +L + L +++  + +L L      A     L   +    SL+ L L  
Sbjct: 203 VSNNDLSEAGVRTLCQGLKDSACPLEALKLENCGVTAANCRDLCSAVASKTSLQALDLGS 262

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L +    I+A+G   +   + + +SL  ++L  N++
Sbjct: 263 NRLGDAGLTELCQGLLRPSFRLRTLWLWECGITAEGCHELCRMLCSLESLRELSLAGNEL 322

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GD GA+ + ++ L     + ++ +   ++ +      + VL  N  +  L ++ NP+G  
Sbjct: 323 GDAGAQLLCESLLAPGCRLESLWVKTCSLTAACCPLFSSVLAQNKCLLELQMSSNPLGDV 382

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G +   L LG C +   G   +A  L  N+++  LDL  N + DEG +
Sbjct: 383 GVQTLCQGLGQPGTVLRVLWLGDCDVSDVGCSSLASTLLANHSLRELDLSNNRMGDEGVR 442

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDDGAFAIAQ 550
            L  S +      E L   D+ ++E  D+   A+ +
Sbjct: 443 QLMGSLRQPGCALEQLVLYDIYWSEEMDNQLRALEE 478



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 177/412 (42%), Gaps = 9/412 (2%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           L +  S+D+      D       E L   Q  + V     G+T    +     L++N AL
Sbjct: 28  LSSTMSLDIQCEQLSDT---RWTELLPLIQQCQVVRLDDCGLTEVRCQDMSSALRANPAL 84

Query: 221 KTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L+L  N +GD GV+ +   L      +++L L +  L + G   +  +L++   LR L
Sbjct: 85  TELDLRTNELGDAGVRLVLQALQGPTCTIQKLSLQNCCLTEAGCGVLPSMLRSVPSLREL 144

Query: 280 ELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L++N +  +G   L E LL     +  L L      A     LA  L      +EL + 
Sbjct: 145 HLSDNPLGDAGLKLLCEGLLNPQCHLEKLQLEYCNLTAASCEFLASVLRAKPDFKELIVS 204

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N + + G+R L  GL      L  L + N  ++A     +   + +  SL  ++L  N 
Sbjct: 205 NNDLSEAGVRTLCQGLKDSACPLEALKLENCGVTAANCRDLCSAVASKTSLQALDLGSNR 264

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           +GD G  ++    L+ +  + T+ L    I ++G   + R+L     +  L LA N +G 
Sbjct: 265 LGDAGLTELCQGLLRPSFRLRTLWLWECGITAEGCHELCRMLCSLESLRELSLAGNELGD 324

Query: 458 DGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            GA+ L E L   G  + +L +  C + A+     + +L  N  +  L + +N L D G 
Sbjct: 325 AGAQLLCESLLAPGCRLESLWVKTCSLTAACCPLFSSVLAQNKCLLELQMSSNPLGDVGV 384

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           + L Q        L  + L   ++ D G  ++A  L AN   ++  L+L+NN
Sbjct: 385 QTLCQGLGQPGTVLRVLWLGDCDVSDVGCSSLASTLLANH--SLRELDLSNN 434



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 6/263 (2%)

Query: 157 FAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDG 212
            A  LRA   F  + +S  +  + G+  L + L  +    E +     G+TAA  +    
Sbjct: 188 LASVLRAKPDFKELIVSNNDLSEAGVRTLCQGLKDSACPLEALKLENCGVTAANCRDLCS 247

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            + S  +L+ L+L  N +GD G+  LC  +L  +  +  L L    +  EG   +  +L 
Sbjct: 248 AVASKTSLQALDLGSNRLGDAGLTELCQGLLRPSFRLRTLWLWECGITAEGCHELCRMLC 307

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +   LR L L  N +  +G   L E+LL     + SL +      A      +  L  NK
Sbjct: 308 SLESLRELSLAGNELGDAGAQLLCESLLAPGCRLESLWVKTCSLTAACCPLFSSVLAQNK 367

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L EL +  N +GD G++ L  GL      L VL +G+  +S  G   +A  +    SL 
Sbjct: 368 CLLELQMSSNPLGDVGVQTLCQGLGQPGTVLRVLWLGDCDVSDVGCSSLASTLLANHSLR 427

Query: 391 WINLYMNDIGDEGAEKIADALKQ 413
            ++L  N +GDEG  ++  +L+Q
Sbjct: 428 ELDLSNNRMGDEGVRQLMGSLRQ 450


>gi|46446604|ref|YP_007969.1| hypothetical protein pc0970 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46400245|emb|CAF23694.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1605

 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 139/293 (47%), Gaps = 30/293 (10%)

Query: 268  ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
            +L +N+S L  L  +  +I       +A  L  N+ +  L LN N     G  ALA  L 
Sbjct: 1336 QLYRNDSWLNSLSFSYRIISDKKAEVIANGLAFNTALSFLRLNSNQITDRGVEALAHALA 1395

Query: 328  GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
             N ++++  L  N I DEG +A+   L+S           NN+                 
Sbjct: 1396 YNTAIKQFWLDRNQISDEGAKAISKALTS-----------NNTFET-------------- 1430

Query: 388  SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
                I+L  N I DEGAE IA AL  N T+  + L GN I  KGA AI + L  N+V+  
Sbjct: 1431 ----ISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAYNTVLKK 1486

Query: 448  LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            L L+YN I  +GAKA+++ L  +  + TL L + QI   G E +A  L  N  +  L L 
Sbjct: 1487 LALSYNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGMEALAQALASNTALRELSLN 1546

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
             N + DEG + LAQ+    N  L  + L  N+I D G  A+A+ L +++   V
Sbjct: 1547 GNQISDEGMEALAQAL-ASNTTLRELSLNGNQISDRGMEALARTLASHKYFRV 1598



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 104/186 (55%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
               DEG   ++++L  N T E +S   N I+  G +A    L SN  L+ L L+GN I D
Sbjct: 1409 QISDEGAKAISKALTSNNTFETISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISD 1468

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            +G K +   L  N  +++L LS   + DEGAKAIA+ L +N+ L  L L  N I   G  
Sbjct: 1469 KGAKAIFKALAYNTVLKKLALSYNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGME 1528

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA+AL  N+ +R L LNGN     G  ALA+ L  N +LREL L+GN I D G+ AL  
Sbjct: 1529 ALAQALASNTALRELSLNGNQISDEGMEALAQALASNTTLRELSLNGNQISDRGMEALAR 1588

Query: 353  GLSSRK 358
             L+S K
Sbjct: 1589 TLASHK 1594



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 126/276 (45%), Gaps = 29/276 (10%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             +S+  S R   D+    +A  L +N     +   +N IT  G++A    L  N A+K  
Sbjct: 1344 LNSLSFSYRIISDKKAEVIANGLAFNTALSFLRLNSNQITDRGVEALAHALAYNTAIKQF 1403

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
             L  N I DEG K +   L  N   E + L    + DEGA+AIA+ L +N+ LR L LN 
Sbjct: 1404 WLDRNQISDEGAKAISKALTSNNTFETISLEYNQISDEGAEAIAQALASNTTLRELFLNG 1463

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            N I   G  ++ +AL  N+ ++ L L+ N     GA A+A+ L  N +L  L L  N I 
Sbjct: 1464 NQISDKGAKAIFKALAYNTVLKKLALSYNQISDEGAKAIAQALASNNTLETLSLEYNQIS 1523

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            DEG+ AL   L+S                                L  ++L  N I DEG
Sbjct: 1524 DEGMEALAQALASNTA-----------------------------LRELSLNGNQISDEG 1554

Query: 404  AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
             E +A AL  N T+  + L GN I  +G  A+AR L
Sbjct: 1555 MEALAQALASNTTLRELSLNGNQISDRGMEALARTL 1590



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 132/251 (52%), Gaps = 1/251 (0%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            L +L+ S   I D+  + + + L  N  +  L+L+S  + D G +A+A  L  N+ ++  
Sbjct: 1344 LNSLSFSYRIISDKKAEVIANGLAFNTALSFLRLNSNQITDRGVEALAHALAYNTAIKQF 1403

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L+ N I   G  ++++AL  N+T  ++ L  N     GA A+A+ L  N +LREL L+G
Sbjct: 1404 WLDRNQISDEGAKAISKALTSNNTFETISLEYNQISDEGAEAIAQALASNTTLRELFLNG 1463

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N I D+G +A+   L+     L  L +  N IS +GA  +A+ + +  +L  ++L  N I
Sbjct: 1464 NQISDKGAKAIFKALAY-NTVLKKLALSYNQISDEGAKAIAQALASNNTLETLSLEYNQI 1522

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             DEG E +A AL  N  +  + L GN I  +G  A+A+ L  N+ +  L L  N I   G
Sbjct: 1523 SDEGMEALAQALASNTALRELSLNGNQISDEGMEALAQALASNTTLRELSLNGNQISDRG 1582

Query: 460  AKALSEVLKFH 470
             +AL+  L  H
Sbjct: 1583 MEALARTLASH 1593



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 112/213 (52%), Gaps = 1/213 (0%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A S + ++     D G+  LA +L YN   ++     N I+  G KA    L SN   +T
Sbjct: 1371 ALSFLRLNSNQITDRGVEALAHALAYNTAIKQFWLDRNQISDEGAKAISKALTSNNTFET 1430

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            ++L  N I DEG + +   L  N  +  L L+   + D+GAKAI + L  N++L+ L L+
Sbjct: 1431 ISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAYNTVLKKLALS 1490

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
             N I   G  ++A+AL  N+T+ +L L  N     G  ALA+ L  N +LREL L+GN I
Sbjct: 1491 YNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGMEALAQALASNTALRELSLNGNQI 1550

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             DEG+ AL   L+S    L  L +  N IS +G
Sbjct: 1551 SDEGMEALAQALAS-NTTLRELSLNGNQISDRG 1582



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 140/298 (46%), Gaps = 34/298 (11%)

Query: 268  ELLKNNSILRVL-ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
            E +K   I ++L E+  + ID      L +    +S + SL  +        A  +A GL
Sbjct: 1310 ETVKKERISKILREIKTSEIDR---IELFQLYRNDSWLNSLSFSYRIISDKKAEVIANGL 1366

Query: 327  EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
              N +L  L L+ N I D G+ AL   L+     +    +  N IS +GA  +++ + + 
Sbjct: 1367 AFNTALSFLRLNSNQITDRGVEALAHALAYNTA-IKQFWLDRNQISDEGAKAISKALTSN 1425

Query: 387  KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
             +   I+L  N I DEGAE IA AL  N T+  + L GN I  KGA AI + L  N+V+ 
Sbjct: 1426 NTFETISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAYNTVLK 1485

Query: 447  SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             L L+YN I  +GAKA                            +A  L  NNT+  L L
Sbjct: 1486 KLALSYNQISDEGAKA----------------------------IAQALASNNTLETLSL 1517

Query: 507  RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
              N + DEG + LAQ+    N AL  + L  N+I D+G  A+AQAL +N  +   SLN
Sbjct: 1518 EYNQISDEGMEALAQAL-ASNTALRELSLNGNQISDEGMEALAQALASNTTLRELSLN 1574



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 126/258 (48%), Gaps = 1/258 (0%)

Query: 238  LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
            L  +  +++ +  L  S   + D+ A+ IA  L  N+ L  L LN+N I   G  +LA A
Sbjct: 1334 LFQLYRNDSWLNSLSFSYRIISDKKAEVIANGLAFNTALSFLRLNSNQITDRGVEALAHA 1393

Query: 298  LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            L  N+ I+   L+ N     GA A++K L  N +   + L  N I DEG  A+   L+S 
Sbjct: 1394 LAYNTAIKQFWLDRNQISDEGAKAISKALTSNNTFETISLEYNQISDEGAEAIAQALAS- 1452

Query: 358  KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
               L  L +  N IS KGA  + + +     L  + L  N I DEGA+ IA AL  N T+
Sbjct: 1453 NTTLRELFLNGNQISDKGAKAIFKALAYNTVLKKLALSYNQISDEGAKAIAQALASNNTL 1512

Query: 418  TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
             T+ L  N I  +G  A+A+ L  N+ +  L L  N I  +G +AL++ L  +  +  L 
Sbjct: 1513 ETLSLEYNQISDEGMEALAQALASNTALRELSLNGNQISDEGMEALAQALASNTTLRELS 1572

Query: 478  LGWCQIGASGAEFVADML 495
            L   QI   G E +A  L
Sbjct: 1573 LNGNQISDRGMEALARTL 1590



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 88/170 (51%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +      DEG   +A++L  N T  E+    N I+  G KA    L  N  LK L
Sbjct: 1428 FETISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAYNTVLKKL 1487

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
             LS N I DEG K +   L  N  +E L L    + DEG +A+A+ L +N+ LR L LN 
Sbjct: 1488 ALSYNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGMEALAQALASNTALRELSLNG 1547

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
            N I   G  +LA+AL  N+T+R L LNGN     G  ALA+ L  +K  R
Sbjct: 1548 NQISDEGMEALAQALASNTTLRELSLNGNQISDRGMEALARTLASHKYFR 1597



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 110/211 (52%), Gaps = 3/211 (1%)

Query: 371  ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
            IS K A  +A  +    +L ++ L  N I D G E +A AL  N  I    L  N I  +
Sbjct: 1354 ISDKKAEVIANGLAFNTALSFLRLNSNQITDRGVEALAHALAYNTAIKQFWLDRNQISDE 1413

Query: 431  GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
            GA AI++ L  N+   ++ L YN I  +GA+A+++ L  +  +  L L   QI   GA+ 
Sbjct: 1414 GAKAISKALTSNNTFETISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKA 1473

Query: 491  VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
            +   L YN  +  L L  N + DEGAK +AQ+    N  L ++ L +N+I D+G  A+AQ
Sbjct: 1474 IFKALAYNTVLKKLALSYNQISDEGAKAIAQAL-ASNNTLETLSLEYNQISDEGMEALAQ 1532

Query: 551  ALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            AL +N   A+  L+L  N ++  G  AL  A
Sbjct: 1533 ALASN--TALRELSLNGNQISDEGMEALAQA 1561



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)

Query: 392  INLYMND------------IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
              LY ND            I D+ AE IA+ L  N  ++ + L  N I  +G  A+A  L
Sbjct: 1335 FQLYRNDSWLNSLSFSYRIISDKKAEVIANGLAFNTALSFLRLNSNQITDRGVEALAHAL 1394

Query: 440  KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
              N+ I    L  N I  +GAKA+S+ L  +    T+ L + QI   GAE +A  L  N 
Sbjct: 1395 AYNTAIKQFWLDRNQISDEGAKAISKALTSNNTFETISLEYNQISDEGAEAIAQALASNT 1454

Query: 500  TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
            T+  L L  N + D+GAK + ++    N  L  + L++N+I D+GA AIAQAL +N    
Sbjct: 1455 TLRELFLNGNQISDKGAKAIFKAL-AYNTVLKKLALSYNQISDEGAKAIAQALASNN--T 1511

Query: 560  VTSLNLANNFLTKFGQSALTDA 581
            + +L+L  N ++  G  AL  A
Sbjct: 1512 LETLSLEYNQISDEGMEALAQA 1533



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 59/110 (53%)

Query: 169  MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
            +S     DEG   +A++L  N T E +S   N I+  G++A    L SN AL+ L+L+GN
Sbjct: 1489 LSYNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGMEALAQALASNTALRELSLNGN 1548

Query: 229  PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             I DEG++ L   L  N  +  L L+   + D G +A+A  L ++   RV
Sbjct: 1549 QISDEGMEALAQALASNTTLRELSLNGNQISDRGMEALARTLASHKYFRV 1598


>gi|403371680|gb|EJY85722.1| hypothetical protein OXYTRI_16292 [Oxytricha trifallax]
          Length = 688

 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 177/349 (50%), Gaps = 12/349 (3%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +G +  K L DI++ +  +  + LS   + DEGAK  AELL   + L  L+L++N I  +
Sbjct: 63  LGIQMCKVLSDIVLKSDRIVEINLSRNKVGDEGAKIFAELLIKTNRLVKLDLSSNEISRN 122

Query: 290 GFTSLAEALLENSTIRSLH------LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           G   ++EAL+ N+++  L       L+ N+ G  G+ +LAK L+ NK L  L + GN +G
Sbjct: 123 GAKIISEALVLNNSLYHLSFFSYEGLHSNFIGEEGSKSLAKMLQQNKILSMLDVGGNKLG 182

Query: 344 DEGIRAL-MSGLSSRKGKLAVLDIGNNSISAKGA-FHVAEYIKNCKSLLWINLYMNDIGD 401
           + G+  L M+   S +  L  L+I NN I+ +G  + +   IK+   L+ +++  + IG 
Sbjct: 183 NNGLSYLSMTIQESSQSSLIYLNISNNDITQEGCQYFLKSLIKS--HLIELDMSKSLIGL 240

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +GA++  + LK N  +  + L    I  +G   I   LK N  +T L+L+ N        
Sbjct: 241 KGAQQFGEVLKLNHFLQKLSLSQCEIGPRGLQDIMNGLKRNKSLTHLNLSRNDFQFSLPN 300

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           +LS +   +  +  L L +C++G+     + D L  N  I  L LR N + D   + L+ 
Sbjct: 301 SLSSMFMINSTLQVLDLSFCRLGSQMMLGITDGLFLNKQIKKLLLRDNQIEDHPIEILSH 360

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
                   +T +DL+ N I D G  A+AQ L  N   ++  LNL  N+L
Sbjct: 361 ILLNPQCTITHLDLSQNFITDFGGVALAQCLSFN--TSLQYLNLKLNYL 407



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 142/308 (46%), Gaps = 66/308 (21%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E++L  N +GDEG + + + L  +  +L  LD+ +N IS  GA  ++E +    SL  ++
Sbjct: 83  EINLSRNKVGDEGAK-IFAELLIKTNRLVKLDLSSNEISRNGAKIISEALVLNNSLYHLS 141

Query: 394 ------LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV--- 444
                 L+ N IG+EG++ +A  L+QN+ ++ +D+GGN + + G S ++  ++++S    
Sbjct: 142 FFSYEGLHSNFIGEEGSKSLAKMLQQNKILSMLDVGGNKLGNNGLSYLSMTIQESSQSSL 201

Query: 445 --------------------------ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
                                     +  LD++ + IG  GA+   EVLK +  +  L L
Sbjct: 202 IYLNISNNDITQEGCQYFLKSLIKSHLIELDMSKSLIGLKGAQQFGEVLKLNHFLQKLSL 261

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF- 537
             C+IG  G + + + L+ N +++ L+L  N  +      L+  F ++N  L  +DL+F 
Sbjct: 262 SQCEIGPRGLQDIMNGLKRNKSLTHLNLSRNDFQFSLPNSLSSMF-MINSTLQVLDLSFC 320

Query: 538 ---------------------------NEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
                                      N+I +D    I   +  N    +T L+L+ NF+
Sbjct: 321 RLGSQMMLGITDGLFLNKQIKKLLLRDNQI-EDHPIEILSHILLNPQCTITHLDLSQNFI 379

Query: 571 TKFGQSAL 578
           T FG  AL
Sbjct: 380 TDFGGVAL 387



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 156/310 (50%), Gaps = 9/310 (2%)

Query: 138 LLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV-- 195
           L S F G+   E  ++L +  ++ +  S +D+ G   G+ GL +L+ ++  +  +  +  
Sbjct: 148 LHSNFIGE---EGSKSLAKMLQQNKILSMLDVGGNKLGNNGLSYLSMTIQESSQSSLIYL 204

Query: 196 SFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           + + N IT  G + F   +++S++    L++S + IG +G +   ++L  N  +++L LS
Sbjct: 205 NISNNDITQEGCQYFLKSLIKSHLI--ELDMSKSLIGLKGAQQFGEVLKLNHFLQKLSLS 262

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
             ++   G + I   LK N  L  L L+ N   +S   SL+   + NST++ L L+    
Sbjct: 263 QCEIGPRGLQDIMNGLKRNKSLTHLNLSRNDFQFSLPNSLSSMFMINSTLQVLDLSFCRL 322

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G+     +  GL  NK +++L L  N I D  I  L   L + +  +  LD+  N I+  
Sbjct: 323 GSQMMLGITDGLFLNKQIKKLLLRDNQIEDHPIEILSHILLNPQCTITHLDLSQNFITDF 382

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGAS 433
           G   +A+ +    SL ++NL +N + DE A+++  +++ QN+ I  ++L  N I  +   
Sbjct: 383 GGVALAQCLSFNTSLQYLNLKLNYLQDETAQQMLQSIRGQNKHIKKMNLKNNFISLRFIG 442

Query: 434 AIARVLKDNS 443
            I  +LK N 
Sbjct: 443 MIEELLKQNQ 452



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 94/176 (53%), Gaps = 10/176 (5%)

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           +K  D    NR +  I++       K  S I  VLK + ++  ++L+ N +G +GAK  +
Sbjct: 44  KKYCDQESFNRKVKFIEMSLGIQMCKVLSDI--VLKSDRIV-EINLSRNKVGDEGAKIFA 100

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD------LRANGLRDEGAKC 518
           E+L     +  L L   +I  +GA+ +++ L  NN++  L       L +N + +EG+K 
Sbjct: 101 ELLIKTNRLVKLDLSSNEISRNGAKIISEALVLNNSLYHLSFFSYEGLHSNFIGEEGSKS 160

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           LA+  +  N+ L+ +D+  N++ ++G   ++  ++ +   ++  LN++NN +T+ G
Sbjct: 161 LAKMLQQ-NKILSMLDVGGNKLGNNGLSYLSMTIQESSQSSLIYLNISNNDITQEG 215


>gi|188501467|gb|ACD54599.1| unknown [Adineta vaga]
          Length = 264

 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 140/250 (56%), Gaps = 9/250 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           RA SS+ +  + F D+ +  +   L  N   EE++  ++ IT+ G+      L  N  LK
Sbjct: 4   RALSSIKLCDQAFLDDDMVIIGIELAVNDNCEELTLRSSDITSIGVTHLGLGLTINCTLK 63

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L+LSGNP+   GV  L  +L  N+ + +L L+SV++ DEG + +A +L  N  L  L +
Sbjct: 64  SLDLSGNPLSATGVANLARVLHHNSTLLKLHLNSVNMGDEGVQTLASMLYKNHTLDFLAI 123

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLN----GNYGGALGANALAKGLEGNKSLRELHL 337
           +NN +  +G  +L EAL  N++++ LHL+    GN GGAL    + + L  N++LR++++
Sbjct: 124 SNNQLTATGLRALCEALETNTSLKFLHLSENNLGNEGGAL----VGRLLLNNETLRKIYM 179

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           +   IGD G+  +++ L  +   L  L +GNN I+ +    +AE I+  ++L    L+ N
Sbjct: 180 NSMGIGDSGLAIMLNAL-KKNETLQKLTVGNNFITDRSVQSIAEMIQANQTLKIFELWKN 238

Query: 398 DIGDEGAEKI 407
            + D   E++
Sbjct: 239 SLSDTAEERL 248



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 5/250 (2%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           AL ++ L      D+ +  +   L  N   E L L S D+   G   +   L  N  L+ 
Sbjct: 5   ALSSIKLCDQAFLDDDMVIIGIELAVNDNCEELTLRSSDITSIGVTHLGLGLTINCTLKS 64

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+ N +  +G  +LA  L  NST+  LHLN    G  G   LA  L  N +L  L + 
Sbjct: 65  LDLSGNPLSATGVANLARVLHHNSTLLKLHLNSVNMGDEGVQTLASMLYKNHTLDFLAIS 124

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +   G+RAL   L +    L  L +  N++  +G   V   + N ++L  I  YMN 
Sbjct: 125 NNQLTATGLRALCEALETNTS-LKFLHLSENNLGNEGGALVGRLLLNNETLRKI--YMNS 181

Query: 399 --IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
             IGD G   + +ALK+N T+  + +G N I  +   +IA +++ N  +   +L  N + 
Sbjct: 182 MGIGDSGLAIMLNALKKNETLQKLTVGNNFITDRSVQSIAEMIQANQTLKIFELWKNSLS 241

Query: 457 ADGAKALSEV 466
               + L ++
Sbjct: 242 DTAEERLRKI 251



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 2/214 (0%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +  EL L  + I   G+  L  GL+     L  LD+  N +SA G  ++A  + +  +
Sbjct: 31  NDNCEELTLRSSDITSIGVTHLGLGLTI-NCTLKSLDLSGNPLSATGVANLARVLHHNST 89

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           LL ++L   ++GDEG + +A  L +N T+  + +  N + + G  A+   L+ N+ +  L
Sbjct: 90  LLKLHLNSVNMGDEGVQTLASMLYKNHTLDFLAISNNQLTATGLRALCEALETNTSLKFL 149

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L+ N +G +G   +  +L  +  +  + +    IG SG   + + L+ N T+  L +  
Sbjct: 150 HLSENNLGNEGGALVGRLLLNNETLRKIYMNSMGIGDSGLAIMLNALKKNETLQKLTVGN 209

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           N + D   + +A+  +  N+ L   +L  N + D
Sbjct: 210 NFITDRSVQSIAEMIQ-ANQTLKIFELWKNSLSD 242



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 1/156 (0%)

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D+    I   L  N     + L  ++I S G + +   L  N  + SLDL+ NP+ A G 
Sbjct: 18  DDDMVIIGIELAVNDNCEELTLRSSDITSIGVTHLGLGLTINCTLKSLDLSGNPLSATGV 77

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
             L+ VL  +  +  L L    +G  G + +A ML  N+T+  L +  N L   G + L 
Sbjct: 78  ANLARVLHHNSTLLKLHLNSVNMGDEGVQTLASMLYKNHTLDFLAISNNQLTATGLRALC 137

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           ++ +  N +L  + L+ N + ++G   + + L  NE
Sbjct: 138 EALE-TNTSLKFLHLSENNLGNEGGALVGRLLLNNE 172


>gi|300691489|ref|YP_003752484.1| type III effector protein [Ralstonia solanacearum PSI07]
 gi|299078549|emb|CBJ51205.2| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
           solanacearum PSI07]
          Length = 533

 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 139/425 (32%), Positives = 206/425 (48%), Gaps = 77/425 (18%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           F D  L  L  SL    T  ++S     ITAAGI        S++ L  LN+    IG E
Sbjct: 129 FTDNDLRGLPASL----TELDLSRCRGPITAAGIAHL-----SHLPLVRLNVRDQRIGVE 179

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G +    +L ++  +  L +S+  +  EGA+A+A+    N+ L  L +++N I   G  +
Sbjct: 180 GAR----LLANHPTLTSLDVSNGRIGPEGARALAD----NTRLTTLSVSHNRIGAEGAKA 231

Query: 294 LAE--------------------ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           LA                     AL  N+ + +L++N N  G  GA ALA G    ++L 
Sbjct: 232 LAASETLTSLDISENGIGDEGACALATNTKLTTLNVNRNRIGVEGAKALAAG----EALT 287

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L + GN IGDEG+RAL +       +L  L++    + A G   +A      K+L  + 
Sbjct: 288 SLDIGGNDIGDEGVRALAA-----NARLTTLNVERTRVGADGVGALAA----SKTLTSLR 338

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +  N+IGD GA     AL  N ++TT+ +  N I   GA A+A     N+ +T+L+L YN
Sbjct: 339 IDSNNIGDAGAR----ALATNTSLTTLHIESNGISPAGAQALA----ANTTLTTLNLGYN 390

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A S       N   + L   + G S A   A +L  + T++ LD   N +RD
Sbjct: 391 GIGDAGAQAWS------ANTTLISLSVRRNGLSDAG--ATILAASKTMTTLDAGDNTIRD 442

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA+ LA      N  LT++D+  NEI + G    A+AL AN  +A  SL+L NN +T+ 
Sbjct: 443 AGARALA-----ANRTLTTLDVRSNEIENAG----ARALAANTWLA--SLDLRNNRVTEA 491

Query: 574 GQSAL 578
           G  AL
Sbjct: 492 GVRAL 496



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 147/311 (47%), Gaps = 44/311 (14%)

Query: 156 EFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L A    +S+D+S    GDEG    A +L  N     ++   N I   G KA   
Sbjct: 227 EGAKALAASETLTSLDISENGIGDEG----ACALATNTKLTTLNVNRNRIGVEGAKA--- 279

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L +  AL +L++ GN IGDEGV+ L       A   RL   +V+    GA  +  L  +
Sbjct: 280 -LAAGEALTSLDIGGNDIGDEGVRAL-------AANARLTTLNVERTRVGADGVGALAAS 331

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            + L  L +++N I  +G    A AL  N+++ +LH+  N     GA ALA     N +L
Sbjct: 332 KT-LTSLRIDSNNIGDAG----ARALATNTSLTTLHIESNGISPAGAQALA----ANTTL 382

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L+L  N IGD G +A      S    L  L +  N +S  GA  +A      K++  +
Sbjct: 383 TTLNLGYNGIGDAGAQAW-----SANTTLISLSVRRNGLSDAGATILAA----SKTMTTL 433

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +   N I D GA     AL  NRT+TT+D+  N I + G    AR L  N+ + SLDL  
Sbjct: 434 DAGDNTIRDAGAR----ALAANRTLTTLDVRSNEIENAG----ARALAANTWLASLDLRN 485

Query: 453 NPIGADGAKAL 463
           N +   G +AL
Sbjct: 486 NRVTEAGVRAL 496



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 111/217 (51%), Gaps = 36/217 (16%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I+A G  H++        L+ +N+    IG EGA  +A+    + T+T++D+    I  +
Sbjct: 153 ITAAGIAHLSHL-----PLVRLNVRDQRIGVEGARLLAN----HPTLTSLDVSNGRIGPE 203

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKAL--SEVLKFHGNINTLKLGWCQIGASGA 488
           GA    R L DN+ +T+L +++N IGA+GAKAL  SE L       +L +    IG  GA
Sbjct: 204 GA----RALADNTRLTTLSVSHNRIGAEGAKALAASETL------TSLDISENGIGDEGA 253

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
             +A     N  ++ L++  N +  EGAK LA       EALTS+D+  N+I D+G  A+
Sbjct: 254 CALA----TNTKLTTLNVNRNRIGVEGAKALA-----AGEALTSLDIGGNDIGDEGVRAL 304

Query: 549 AQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
           A       +  +T+LN+    +   G  AL  +K L 
Sbjct: 305 AA------NARLTTLNVERTRVGADGVGALAASKTLT 335



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 133/301 (44%), Gaps = 68/301 (22%)

Query: 156 EFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L    A +S+D+ G + GDEG+  LA                             
Sbjct: 275 EGAKALAAGEALTSLDIGGNDIGDEGVRALA----------------------------- 305

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
              +N  L TLN+    +G +GV  L      +  +  L++ S ++ D GA+A+A     
Sbjct: 306 ---ANARLTTLNVERTRVGADGVGALA----ASKTLTSLRIDSNNIGDAGARALA----T 354

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L + +N I  +G    A+AL  N+T+ +L+L  N  G  GA A +     N +L
Sbjct: 355 NTSLTTLHIESNGISPAG----AQALAANTTLTTLNLGYNGIGDAGAQAWS----ANTTL 406

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L +  N + D G   L +  +     +  LD G+N+I   GA  +A      ++L  +
Sbjct: 407 ISLSVRRNGLSDAGATILAASKT-----MTTLDAGDNTIRDAGARALAAN----RTLTTL 457

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++  N+I + GA     AL  N  + ++DL  N +   G     R L  N  ++SL +++
Sbjct: 458 DVRSNEIENAGAR----ALAANTWLASLDLRNNRVTEAG----VRALLANRTLSSLGVSF 509

Query: 453 N 453
           N
Sbjct: 510 N 510


>gi|351713421|gb|EHB16340.1| Ribonuclease inhibitor [Heterocephalus glaber]
          Length = 456

 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 189/396 (47%), Gaps = 6/396 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + + +     GD G+  + + L       + +S    G+T  G +    VL+    L+
Sbjct: 52  ALAELSLRTNALGDAGVCLVLQGLQSPTCKVQSLSLQNCGLTETGCRVLASVLRCTPTLR 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+GD G++ L + L+D  + +E+L+L S +L     + +A +L+     + L 
Sbjct: 112 ELHLSDNPLGDPGLRLLSEGLLDPQSCLEKLELESCNLSAASCEPLAAMLRAKPNFKELV 171

Query: 281 LNNNMIDYSGFTSLAEALLENSTI-RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I  +G   L   L E++ +  +L L+     +     L   +    SL+EL L G
Sbjct: 172 VSNNCIQEAGIRMLCGGLKESTCLLETLRLDNCGVTSANCKDLCDVVAAKPSLQELDLGG 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI AL  GL     +L  L +    I+A+G   + + ++  +SL  ++L +N++
Sbjct: 232 NRLGDAGIAALCPGLLHTSCRLRKLWLWECDITAEGCRDLGQVLRAKQSLKALSLMLNEL 291

Query: 400 GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +AL++    +  + +   +  +        +L  N  +T L L  N +G  
Sbjct: 292 GDEGARLLCEALQEPSCQLECLWVRVCSFTATCCPHFRALLAQNKFLTELQLGENRLGDA 351

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++   L +G C +  +    +A +L  + ++  LDL  NGL D G  
Sbjct: 352 GVQELCQGLSQPGSVLRVLGIGDCDLSDNCCSNLASVLLASCSLRELDLSNNGLGDPGVL 411

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L +S +     L  + L F+    DG     QAL+
Sbjct: 412 RLVESLRQPGCVLECL-LLFDVYLSDGVNDQLQALE 446



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 170/398 (42%), Gaps = 12/398 (3%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL- 242
           E L   Q  + V     G+T    K     L++N AL  L+L  N +GD GV   C +L 
Sbjct: 17  ELLPLIQQHQVVRLEDCGLTEGRCKDIGSALRANSALAELSLRTNALGDAGV---CLVLQ 73

Query: 243 ---VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
                   V+ L L +  L + G + +A +L+    LR L L++N +   G   L+E LL
Sbjct: 74  GLQSPTCKVQSLSLQNCGLTETGCRVLASVLRCTPTLRELHLSDNPLGDPGLRLLSEGLL 133

Query: 300 E-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           +  S +  L L      A     LA  L    + +EL +  N I + GIR L  GL    
Sbjct: 134 DPQSCLEKLELESCNLSAASCEPLAAMLRAKPNFKELVVSNNCIQEAGIRMLCGGLKEST 193

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-I 417
             L  L + N  +++     + + +    SL  ++L  N +GD G   +   L      +
Sbjct: 194 CLLETLRLDNCGVTSANCKDLCDVVAAKPSLQELDLGGNRLGDAGIAALCPGLLHTSCRL 253

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTL 476
             + L   +I ++G   + +VL+    + +L L  N +G +GA+ L E L+     +  L
Sbjct: 254 RKLWLWECDITAEGCRDLGQVLRAKQSLKALSLMLNELGDEGARLLCEALQEPSCQLECL 313

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            +  C   A+       +L  N  ++ L L  N L D G + L Q        L  + + 
Sbjct: 314 WVRVCSFTATCCPHFRALLAQNKFLTELQLGENRLGDAGVQELCQGLSQPGSVLRVLGIG 373

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
             ++ D+    +A  L A+   ++  L+L+NN L   G
Sbjct: 374 DCDLSDNCCSNLASVLLAS--CSLRELDLSNNGLGDPG 409



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 31/233 (13%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +   +D+ G   GD G+  L   L +      ++      ITA G +    VL++  +LK
Sbjct: 223 SLQELDLGGNRLGDAGIAALCPGLLHTSCRLRKLWLWECDITAEGCRDLGQVLRAKQSLK 282

Query: 222 TLNLSGNPIGDEGVKCLCD-----------------------------ILVDNAGVERLQ 252
            L+L  N +GDEG + LC+                             +L  N  +  LQ
Sbjct: 283 ALSLMLNELGDEGARLLCEALQEPSCQLECLWVRVCSFTATCCPHFRALLAQNKFLTELQ 342

Query: 253 LSSVDLRDEGAKAIAE-LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           L    L D G + + + L +  S+LRVL + +  +  +  ++LA  LL + ++R L L+ 
Sbjct: 343 LGENRLGDAGVQELCQGLSQPGSVLRVLGIGDCDLSDNCCSNLASVLLASCSLRELDLSN 402

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           N  G  G   L + L     + E  L  +    +G+   +  L   K  L ++
Sbjct: 403 NGLGDPGVLRLVESLRQPGCVLECLLLFDVYLSDGVNDQLQALEEEKPTLRII 455


>gi|290970571|ref|XP_002668179.1| predicted protein [Naegleria gruberi]
 gi|284081412|gb|EFC35435.1| predicted protein [Naegleria gruberi]
          Length = 592

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 226/434 (52%), Gaps = 70/434 (16%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F   ++  +SVD+SG   G EG    A+S+   +    ++ + N I   G K+  G+  
Sbjct: 127 KFISGMKQLTSVDISGNRIGIEG----AKSISEMKQLTSLNISNNIIGVEGAKSISGMKH 182

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD-----EGAKAIAELL 270
               L +L++SGN IGDEGVK +          E  QL S+D+       EGAK I+E+ 
Sbjct: 183 ----LTSLDISGNRIGDEGVKSIS---------EMEQLISLDISTNVIGGEGAKFISEMK 229

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +    L  L++  N I   G    A+ + E   + SL+++ N     G+  +++     K
Sbjct: 230 Q----LTSLDIFYNRIGGEG----AKLISEMKQLTSLNISTNEIDVEGSKLISE----MK 277

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L  L++ GN IG EG++++ SG+     +L  L+I  N I  +GA  ++E     K L 
Sbjct: 278 QLTSLNISGNLIGVEGVKSI-SGMK----QLTSLNISGNLIGDEGAKLISEM----KQLT 328

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +++Y N IGDEG + I++ +KQ   +T+ D+  N I+ +GA +I+ + +    +TSL +
Sbjct: 329 SLDIYNNRIGDEGVKSISE-MKQ---LTSFDISNNLIYDEGAKSISGMKQ----LTSLTI 380

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           + N IG +G K +SE+ +    + +L +   +I   GA+F++ M +  +    L +  NG
Sbjct: 381 SNNRIGGEGVKFISEIKQ----LTSLNISKNEIDGEGAKFISGMKQLTS----LTIYKNG 432

Query: 511 LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           + DEG K +++      + LTS+D++ N I D+G  +I++  +      + SL+++ N +
Sbjct: 433 IGDEGVKSISEM-----KQLTSLDISNNRIGDEGVKSISEMEQ------LISLDISTNVI 481

Query: 571 TKFGQSALTDAKDL 584
              G   +++ K L
Sbjct: 482 GGEGAKFISEMKQL 495



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 204/413 (49%), Gaps = 80/413 (19%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F  E++  +S+D+     G EG   ++E     +    ++ + N I   G K    + Q
Sbjct: 223 KFISEMKQLTSLDIFYNRIGGEGAKLISEM----KQLTSLNISTNEIDVEGSKLISEMKQ 278

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELL 270
               L +LN+SGN IG EGVK +       +G++  QL+S+++      DEGAK I+E+ 
Sbjct: 279 ----LTSLNISGNLIGVEGVKSI-------SGMK--QLTSLNISGNLIGDEGAKLISEMK 325

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +    L  L++ NN I   G  S++E       + S  ++ N    L  +  AK + G K
Sbjct: 326 Q----LTSLDIYNNRIGDEGVKSISEM----KQLTSFDISNN----LIYDEGAKSISGMK 373

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L  L +  N IG EG++ +     S   +L  L+I  N I  +GA    ++I   K L 
Sbjct: 374 QLTSLTISNNRIGGEGVKFI-----SEIKQLTSLNISKNEIDGEGA----KFISGMKQLT 424

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + +Y N IGDEG + I++ +KQ   +T++D+  N I  +G  +I+ + +    + SLD+
Sbjct: 425 SLTIYKNGIGDEGVKSISE-MKQ---LTSLDISNNRIGDEGVKSISEMEQ----LISLDI 476

Query: 451 AYNPIGADGAKALSEV-----LKFHGN---------------INTLKLGWCQIGASGAEF 490
           + N IG +GAK +SE+     L   GN               + +L +   QIG  GA+F
Sbjct: 477 STNVIGGEGAKFISEMKQLTSLDISGNLIYDEGVKSISEMKQLTSLNISGNQIGVEGAKF 536

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           +++M +  +    LD+  N + D GAK +++      + LTS+D+  N I D+
Sbjct: 537 ISEMKQLTS----LDISKNEIGDAGAKFISEM-----KQLTSLDVYANRISDE 580


>gi|123448264|ref|XP_001312864.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121894726|gb|EAX99934.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 729

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 174/324 (53%), Gaps = 11/324 (3%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +S  ++ D+GA A + LL++ S +  +++++N I   G + + +AL EN ++  L +  +
Sbjct: 101 ISGNNIGDKGAAAFSTLLQSTSRIISVDISSNSIGDLGCSLIFKALKENKSVIQLKIGSS 160

Query: 313 YG------GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
            G      G      +A+    NK L E+ L    I  + I+A+  GL   K  + V+++
Sbjct: 161 SGVARNTLGVKSIQQMAEMFSENKVLSEIDLSMTEITADTIQAISKGLKENKT-IQVINL 219

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
            NN++  KGA ++   + N + +  +N   N IGD  +++ A+  + N+++ T+++ GN+
Sbjct: 220 QNNNMQTKGASYLLRALVNSQ-IRELNFSNNHIGDVASKEFANFFQTNKSLNTLNISGNS 278

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
             +K   AIA  L  N+ I  L+L+ N IG  G  AL  V   +  ++ L + +C+I A+
Sbjct: 279 FTAKFTGAIAEALGANTSIRELNLSKNNIGGQGIAALGPVFTTNETLHHLNVSFCKIDAA 338

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
           G E  A  L+ N T+  L+L  N LRD GA  LA   K V+ +L  IDL   EI D G+ 
Sbjct: 339 GFETFAINLKQNKTLQCLNLGHNPLRDAGATKLADIIK-VHPSLRDIDLELCEINDSGSD 397

Query: 547 AIAQALKANEDVAVTSLNLANNFL 570
            + +AL  ++   V ++++ NN +
Sbjct: 398 NLFKALTQSK--IVDTVSIKNNLI 419



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 201/427 (47%), Gaps = 29/427 (6%)

Query: 142 FTGKLFR-----ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS 196
           FT KLF+     +SK+T  +           +M   + G      +A+++      + V 
Sbjct: 50  FTEKLFQRFVNNQSKKTFKKI---------FEMESCSLGPLAACAVADTVYKYNNIKVVC 100

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL--- 253
            + N I   G  AF  +LQS   + ++++S N IGD G   +   L +N  V +L++   
Sbjct: 101 ISGNNIGDKGAAAFSTLLQSTSRIISVDISSNSIGDLGCSLIFKALKENKSVIQLKIGSS 160

Query: 254 SSVDLRDEGAKAI---AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           S V     G K+I   AE+   N +L  ++L+   I      ++++ L EN TI+ ++L 
Sbjct: 161 SGVARNTLGVKSIQQMAEMFSENKVLSEIDLSMTEITADTIQAISKGLKENKTIQVINLQ 220

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N     GA+ L + L  N  +REL+   N IGD   +   +   + K  L  L+I  NS
Sbjct: 221 NNNMQTKGASYLLRAL-VNSQIRELNFSNNHIGDVASKEFANFFQTNKS-LNTLNISGNS 278

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
            +AK    +AE +    S+  +NL  N+IG +G   +      N T+  +++    I + 
Sbjct: 279 FTAKFTGAIAEALGANTSIRELNLSKNNIGGQGIAALGPVFTTNETLHHLNVSFCKIDAA 338

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G    A  LK N  +  L+L +NP+   GA  L++++K H ++  + L  C+I  SG++ 
Sbjct: 339 GFETFAINLKQNKTLQCLNLGHNPLRDAGATKLADIIKVHPSLRDIDLELCEINDSGSDN 398

Query: 491 VADMLRYNNTISILDLRANGLRD--EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           +   L  +  +  + ++ N +++      C+ ++  ++N     +++ FN+I       I
Sbjct: 399 LFKALTQSKIVDTVSIKNNLIKNGIPIQTCVNENTHILN-----LNIEFNDIDFKLFTEI 453

Query: 549 AQALKAN 555
            + +K+N
Sbjct: 454 QRQVKSN 460



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 114/225 (50%), Gaps = 11/225 (4%)

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           S+K    + ++ + S+    A  VA+ +    ++  + +  N+IGD+GA   +  L+   
Sbjct: 63  SKKTFKKIFEMESCSLGPLAACAVADTVYKYNNIKVVCISGNNIGDKGAAAFSTLLQSTS 122

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL------AYNPIGADGAKALSEVLKF 469
            I ++D+  N+I   G S I + LK+N  +  L +      A N +G    + ++E+   
Sbjct: 123 RIISVDISSNSIGDLGCSLIFKALKENKSVIQLKIGSSSGVARNTLGVKSIQQMAEMFSE 182

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +  ++ + L   +I A   + ++  L+ N TI +++L+ N ++ +GA  L ++  +VN  
Sbjct: 183 NKVLSEIDLSMTEITADTIQAISKGLKENKTIQVINLQNNNMQTKGASYLLRA--LVNSQ 240

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA-NNFLTKF 573
           +  ++ + N I D  +   A   + N+  ++ +LN++ N+F  KF
Sbjct: 241 IRELNFSNNHIGDVASKEFANFFQTNK--SLNTLNISGNSFTAKF 283


>gi|312796130|ref|YP_004029052.1| hypothetical protein RBRH_03696 [Burkholderia rhizoxinica HKI 454]
 gi|312167905|emb|CBW74908.1| unnamed protein product [Burkholderia rhizoxinica HKI 454]
          Length = 608

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 189/393 (48%), Gaps = 38/393 (9%)

Query: 191 TAEEVSFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGV 248
           T   +  + N I+A   K+  D +   N  L +LNL+   I   G + L   L   N  +
Sbjct: 171 TITSLDLSNNPISAKSAKSLADALCDPNCQLTSLNLNHCGISRRGAQHLGRALTHPNCKL 230

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENST-IRS 306
             L L +    DEGA  + + L N    L  L+L  N +  +    L+  L +++  + S
Sbjct: 231 TSLSLYANRTGDEGAAPVIQALANEHCKLESLDLGRNSLQEASAEQLSRVLGDSACKLVS 290

Query: 307 LHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           L+L+ N+    G   LA+ L   +  L  L L  N + D  I +L + L+   G L  LD
Sbjct: 291 LNLSSNHINDEGVAHLARMLSNQRCGLTMLSLRDNGVSDRSIASLCAALTHPGGSLTALD 350

Query: 366 IGNNSISAKGAFHVAEYIKN--CKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDL 422
           +GNN IS  GA HV + + N  CK L  ++L  N+I D G   IA AL      +T++D+
Sbjct: 351 LGNNRISEAGAEHVGQALANSHCK-LAGLSLRQNNIADGGVRHIARALTNPHCKLTSLDV 409

Query: 423 GGNNIHSKGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           G N I ++GA  + R L +    +TSLDL  N IGADG K +++ L  H N   + LG  
Sbjct: 410 GSNGISAQGAEHLGRALGNAGCQLTSLDLQGNQIGADGTKHVADPLS-HPNCKLVSLG-- 466

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
                                   L +N + +EGA  +A++ +  N  + S++LAFN I 
Sbjct: 467 ------------------------LGSNNIGNEGAAHMARAIRDANCKVVSLNLAFNAID 502

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
             G   +++AL A+ +  VTSL+L++N +   G
Sbjct: 503 HRGVEQVSRAL-AHPNCKVTSLDLSSNAIGAQG 534



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 160/327 (48%), Gaps = 11/327 (3%)

Query: 264 KAIAELLKN-NSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA 321
           + +A+LL++ +  +  L+L+NN I      SLA+AL + N  + SL+LN       GA  
Sbjct: 159 QQLADLLRSPDCTITSLDLSNNPISAKSAKSLADALCDPNCQLTSLNLNHCGISRRGAQH 218

Query: 322 LAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           L + L   N  L  L L+ N  GDEG   ++  L++   KL  LD+G NS+    A  ++
Sbjct: 219 LGRALTHPNCKLTSLSLYANRTGDEGAAPVIQALANEHCKLESLDLGRNSLQEASAEQLS 278

Query: 381 EYIKN--CKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKG-ASAIA 436
             + +  CK L+ +NL  N I DEG   +A  L   R  +T + L  N +  +  AS  A
Sbjct: 279 RVLGDSACK-LVSLNLSSNHINDEGVAHLARMLSNQRCGLTMLSLRDNGVSDRSIASLCA 337

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADML 495
            +      +T+LDL  N I   GA+ + + L   H  +  L L    I   G   +A  L
Sbjct: 338 ALTHPGGSLTALDLGNNRISEAGAEHVGQALANSHCKLAGLSLRQNNIADGGVRHIARAL 397

Query: 496 RYNNT-ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
              +  ++ LD+ +NG+  +GA+ L ++       LTS+DL  N+I  DG   +A  L +
Sbjct: 398 TNPHCKLTSLDVGSNGISAQGAEHLGRALGNAGCQLTSLDLQGNQIGADGTKHVADPL-S 456

Query: 555 NEDVAVTSLNLANNFLTKFGQSALTDA 581
           + +  + SL L +N +   G + +  A
Sbjct: 457 HPNCKLVSLGLGSNNIGNEGAAHMARA 483


>gi|156372508|ref|XP_001629079.1| predicted protein [Nematostella vectensis]
 gi|156216071|gb|EDO37016.1| predicted protein [Nematostella vectensis]
          Length = 295

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 158/291 (54%), Gaps = 12/291 (4%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILR 277
           L  LN+S N IGDEG K + + L  +N  + +L +S  ++ DEGAK I E L   N  L 
Sbjct: 1   LTKLNISDNNIGDEGAKYIGEALGHENCKLTKLNISDNNIGDEGAKYIGEALGHENCKLT 60

Query: 278 VLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEG-NKSLREL 335
            L ++NN I   G   + EAL  EN  +  L+++ N  G  GA  + + L   N  L  L
Sbjct: 61  KLNISNNNIGDEGAKYIGEALAHENCKLTKLNISNNNIGDEGAKYIGEALANENCKLTHL 120

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKSLLWIN 393
           ++  N+IGDEG + +   L     KL  LDI    I  +GA ++ E +  +NCK L  +N
Sbjct: 121 NMRRNNIGDEGAKYICEELRHENCKLTQLDIKYTYIGDEGAKYIGEALGHENCK-LTKLN 179

Query: 394 LYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLA 451
           +  N+IGDEGA+ I +AL  +N  +T +++  NNI  +GA  I   L+ +N  +T LD+ 
Sbjct: 180 ISNNNIGDEGAKYIGEALANENCKLTHLNMRRNNIGDEGAKYICEELRHENCKLTQLDIK 239

Query: 452 YNPIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNT 500
           Y  IG +GAK + E L  H N  +  L +    IG  GA+++ + LR+ N 
Sbjct: 240 YTYIGDEGAKYIGEALG-HENCKLTQLDISRTYIGDEGAKYICEALRHENC 289



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 168/322 (52%), Gaps = 36/322 (11%)

Query: 250 RLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           +L +S  ++ DEGAK I E L   N  L  L +++N I   G   + EAL          
Sbjct: 3   KLNISDNNIGDEGAKYIGEALGHENCKLTKLNISDNNIGDEGAKYIGEAL---------- 52

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
                           G E N  L +L++  N+IGDEG + +   L+    KL  L+I N
Sbjct: 53  ----------------GHE-NCKLTKLNISNNNIGDEGAKYIGEALAHENCKLTKLNISN 95

Query: 369 NSISAKGAFHVAEYI--KNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGN 425
           N+I  +GA ++ E +  +NCK L  +N+  N+IGDEGA+ I + L+ +N  +T +D+   
Sbjct: 96  NNIGDEGAKYIGEALANENCK-LTHLNMRRNNIGDEGAKYICEELRHENCKLTQLDIKYT 154

Query: 426 NIHSKGASAIARVL-KDNSVITSLDLAYNPIGADGAKALSEVL-KFHGNINTLKLGWCQI 483
            I  +GA  I   L  +N  +T L+++ N IG +GAK + E L   +  +  L +    I
Sbjct: 155 YIGDEGAKYIGEALGHENCKLTKLNISNNNIGDEGAKYIGEALANENCKLTHLNMRRNNI 214

Query: 484 GASGAEFVADMLRYNNT-ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           G  GA+++ + LR+ N  ++ LD++   + DEGAK + ++    N  LT +D++   I D
Sbjct: 215 GDEGAKYICEELRHENCKLTQLDIKYTYIGDEGAKYIGEALGHENCKLTQLDISRTYIGD 274

Query: 543 DGAFAIAQALKANEDVAVTSLN 564
           +GA  I +AL+ +E+  + S N
Sbjct: 275 EGAKYICEALR-HENCNLLSCN 295



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 158/322 (49%), Gaps = 39/322 (12%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVL-QSNIALK 221
            + +++S  N GDEG  ++ E+LG+ N    +++ + N I   G K     L   N  L 
Sbjct: 1   LTKLNISDNNIGDEGAKYIGEALGHENCKLTKLNISDNNIGDEGAKYIGEALGHENCKLT 60

Query: 222 TLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKN-NSILRVL 279
            LN+S N IGDEG K + + L  +N  + +L +S+ ++ DEGAK I E L N N  L  L
Sbjct: 61  KLNISNNNIGDEGAKYIGEALAHENCKLTKLNISNNNIGDEGAKYIGEALANENCKLTHL 120

Query: 280 ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +  N I   G   + E L  EN  +  L +   Y                         
Sbjct: 121 NMRRNNIGDEGAKYICEELRHENCKLTQLDIKYTY------------------------- 155

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKSLLWINLYM 396
              IGDEG + +   L     KL  L+I NN+I  +GA ++ E +  +NCK L  +N+  
Sbjct: 156 ---IGDEGAKYIGEALGHENCKLTKLNISNNNIGDEGAKYIGEALANENCK-LTHLNMRR 211

Query: 397 NDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYNP 454
           N+IGDEGA+ I + L+ +N  +T +D+    I  +GA  I   L  +N  +T LD++   
Sbjct: 212 NNIGDEGAKYICEELRHENCKLTQLDIKYTYIGDEGAKYIGEALGHENCKLTQLDISRTY 271

Query: 455 IGADGAKALSEVLKFHGNINTL 476
           IG +GAK + E L+ H N N L
Sbjct: 272 IGDEGAKYICEALR-HENCNLL 292



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 110/261 (42%), Gaps = 59/261 (22%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
            A E    + +++S  N GDEG  ++ E+L                              
Sbjct: 81  LAHENCKLTKLNISNNNIGDEGAKYIGEALA---------------------------NE 113

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELL-KNNS 274
           N  L  LN+  N IGDEG K +C+ L  +N  + +L +    + DEGAK I E L   N 
Sbjct: 114 NCKLTHLNMRRNNIGDEGAKYICEELRHENCKLTQLDIKYTYIGDEGAKYIGEALGHENC 173

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L ++NN I   G   + EAL  N   +  HLN                        
Sbjct: 174 KLTKLNISNNNIGDEGAKYIGEALA-NENCKLTHLN------------------------ 208

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKSLLWI 392
             +  N+IGDEG + +   L     KL  LDI    I  +GA ++ E +  +NCK L  +
Sbjct: 209 --MRRNNIGDEGAKYICEELRHENCKLTQLDIKYTYIGDEGAKYIGEALGHENCK-LTQL 265

Query: 393 NLYMNDIGDEGAEKIADALKQ 413
           ++    IGDEGA+ I +AL+ 
Sbjct: 266 DISRTYIGDEGAKYICEALRH 286



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 4/153 (2%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIK 208
           +K    E   E    + +D+     GDEG  ++ E+LG+ N    +++ + N I   G K
Sbjct: 132 AKYICEELRHENCKLTQLDIKYTYIGDEGAKYIGEALGHENCKLTKLNISNNNIGDEGAK 191

Query: 209 AF-DGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAI 266
              + +   N  L  LN+  N IGDEG K +C+ L  +N  + +L +    + DEGAK I
Sbjct: 192 YIGEALANENCKLTHLNMRRNNIGDEGAKYICEELRHENCKLTQLDIKYTYIGDEGAKYI 251

Query: 267 AELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            E L   N  L  L+++   I   G   + EAL
Sbjct: 252 GEALGHENCKLTQLDISRTYIGDEGAKYICEAL 284



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 2/100 (2%)

Query: 483 IGASGAEFVADMLRYNNT-ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           IG  GA+++ + L + N  ++ L++  N + DEGAK + ++    N  LT ++++ N I 
Sbjct: 11  IGDEGAKYIGEALGHENCKLTKLNISDNNIGDEGAKYIGEALGHENCKLTKLNISNNNIG 70

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           D+GA  I +AL A+E+  +T LN++NN +   G   + +A
Sbjct: 71  DEGAKYIGEAL-AHENCKLTKLNISNNNIGDEGAKYIGEA 109


>gi|344174745|emb|CCA86555.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
           syzygii R24]
          Length = 468

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 184/365 (50%), Gaps = 52/365 (14%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L ++  L +L++S   IG EG + L D    N  +  L +S   +  EGAKA+A     +
Sbjct: 119 LANHPTLTSLDVSNGRIGPEGARALAD----NTKLTTLSVSHNRIGAEGAKALAA----S 170

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L+++ N I   G  +LA     N+ + +L++N N  G  GA ALA G    ++L 
Sbjct: 171 KTLTSLDISENGIGNEGACALAT----NAKLTTLNVNRNQIGVEGAKALAAG----EALT 222

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L + GN IGDEG+RAL +       +L  L++    + A G   +A      K+L  + 
Sbjct: 223 SLDIGGNDIGDEGVRALAA-----NARLTTLNVERTRVGADGVGALAA----SKTLTSLR 273

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +  N IGD GA     AL  N ++TT+ +  N I   GA A+A     N+ +T+L+L YN
Sbjct: 274 IDSNTIGDAGAR----ALATNTSLTTLHIESNGISPAGAQALA----ANTTLTTLNLGYN 325

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A      +  N   + L   + G S A   A  L  + T++ LD   N +RD
Sbjct: 326 GIGDAGAQA------WSANTTLISLSVRRSGLSDAG--ATTLAASKTLTTLDAGDNTIRD 377

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA+ LA      N  LT++D+  NEI + G    A+AL AN  +A  SL+L NN +TK 
Sbjct: 378 AGARALA-----ANRTLTTLDVRSNEIENAG----ARALAANTRLA--SLDLRNNRVTKA 426

Query: 574 GQSAL 578
           G  AL
Sbjct: 427 GVRAL 431



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 32/215 (14%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I+A G  H++        L+ +N+    IG EGA ++A+    + T+T++D+    I  +
Sbjct: 88  ITAAGIAHLSRL-----PLVRLNVRDKRIGAEGARRLAN----HPTLTSLDVSNGRIGPE 138

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA    R L DN+ +T+L +++N IGA+GAKAL+        + +L +    IG  GA  
Sbjct: 139 GA----RALADNTKLTTLSVSHNRIGAEGAKALAA----SKTLTSLDISENGIGNEGACA 190

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           +A     N  ++ L++  N +  EGAK LA       EALTS+D+  N+I D+G  A+A 
Sbjct: 191 LA----TNAKLTTLNVNRNQIGVEGAKALA-----AGEALTSLDIGGNDIGDEGVRALAA 241

Query: 551 ALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
                 +  +T+LN+    +   G  AL  +K L 
Sbjct: 242 ------NARLTTLNVERTRVGADGVGALAASKTLT 270



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 132/301 (43%), Gaps = 68/301 (22%)

Query: 156 EFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L    A +S+D+ G + GDEG+  LA                             
Sbjct: 210 EGAKALAAGEALTSLDIGGNDIGDEGVRALA----------------------------- 240

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
              +N  L TLN+    +G +GV  L      +  +  L++ S  + D GA+A+A     
Sbjct: 241 ---ANARLTTLNVERTRVGADGVGALA----ASKTLTSLRIDSNTIGDAGARALA----T 289

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L + +N I  +G    A+AL  N+T+ +L+L  N  G  GA A +     N +L
Sbjct: 290 NTSLTTLHIESNGISPAG----AQALAANTTLTTLNLGYNGIGDAGAQAWS----ANTTL 341

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L +  + + D G   L +  +     L  LD G+N+I   GA  +A      ++L  +
Sbjct: 342 ISLSVRRSGLSDAGATTLAASKT-----LTTLDAGDNTIRDAGARALAAN----RTLTTL 392

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++  N+I + GA     AL  N  + ++DL  N +   G     R L  N  ++SL +++
Sbjct: 393 DVRSNEIENAGAR----ALAANTRLASLDLRNNRVTKAG----VRALLANRTLSSLGVSF 444

Query: 453 N 453
           N
Sbjct: 445 N 445


>gi|386333663|ref|YP_006029833.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
 gi|334196112|gb|AEG69297.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
          Length = 629

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 137/416 (32%), Positives = 198/416 (47%), Gaps = 85/416 (20%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +S+++     GDEG   LA S     T + ++ + NGI  AG+  F      N  L  L
Sbjct: 264 LASLNLHNNGIGDEGALALATS----GTLKSLNASNNGIGDAGVLGF----ADNAVLTQL 315

Query: 224 NLSGNPIGDEGVKCL-CDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL+GN IG  G + L C     N  +  L LS+  L D GA+ +A     N  L  L L 
Sbjct: 316 NLAGNMIGPAGARALRC-----NTSLTELDLSTNRLGDAGAQVLAA----NRSLTSLNLR 366

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G     EAL  N+T++SL+L+ N  G  GA AL     G+ +LREL L   +I
Sbjct: 367 HNEIGDDG----TEALARNTTLKSLNLSYNPIGFWGAGALG----GSTTLRELDLRCCAI 418

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
              G  AL     +R   LA L +G+N I                            GD 
Sbjct: 419 DPYGASAL-----ARNTSLASLHLGSNRI----------------------------GDS 445

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  IA     +RT+T +DL  NNIH  GA A+A     N  +TSL+L  N +  DGA A
Sbjct: 446 GARAIA----TSRTLTLLDLSRNNIHDAGAQALA----GNGSLTSLNLYGNEVDDDGAAA 497

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           L+     H  + +L LG  +IG +GA+ +A     + T++ LDL  N +  EGA  L+  
Sbjct: 498 LAH----HPRLTSLNLGRNRIGPNGAQHLA----KSATLTELDLSENRIGPEGADALS-- 547

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
              ++  LT+++++ N I + GA A A+     +  ++TSL+  NN + + G   L
Sbjct: 548 ---LSTVLTTLNVSDNAIGEKGARAFAE-----KSTSLTSLDARNNGMGEAGAKML 595



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 131/414 (31%), Positives = 198/414 (47%), Gaps = 74/414 (17%)

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCL--CDILVDNAGVERLQLSSVDLRD 260
           T +G+      L +   LK+L+L+G  I  EG + L  C  L        L L+   + D
Sbjct: 176 TGSGVSNAGLALLATRPLKSLSLNGIEIDAEGARLLATCTSLTS------LSLTGCSIGD 229

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
             A A+A   ++ SI   L+L+ NMI   G  +LA A L      SL+L+ N  G  GA 
Sbjct: 230 RAATALA---RSRSIA-SLDLSVNMIGPDGARALAGAPLA-----SLNLHNNGIGDEGAL 280

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ALA     + +L+ L+   N IGD G+        +    L  L++  N I   G    A
Sbjct: 281 ALAT----SGTLKSLNASNNGIGDAGVLGF-----ADNAVLTQLNLAGNMIGPAG----A 327

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             ++   SL  ++L  N +GD GA+ +A     NR++T+++L  N I   G  A+AR   
Sbjct: 328 RALRCNTSLTELDLSTNRLGDAGAQVLA----ANRSLTSLNLRHNEIGDDGTEALAR--- 380

Query: 441 DNSVITSLDLAYNPIGADGAKAL--------------------SEVLKFHGNINTLKLGW 480
            N+ + SL+L+YNPIG  GA AL                    +  L  + ++ +L LG 
Sbjct: 381 -NTTLKSLNLSYNPIGFWGAGALGGSTTLRELDLRCCAIDPYGASALARNTSLASLHLGS 439

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            +IG SGA  +A     + T+++LDL  N + D GA+ LA      N +LTS++L  NE+
Sbjct: 440 NRIGDSGARAIA----TSRTLTLLDLSRNNIHDAGAQALAG-----NGSLTSLNLYGNEV 490

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV-YEMSEKEV 593
            DDGA A+A   +      +TSLNL  N +   G   L  +  L   ++SE  +
Sbjct: 491 DDDGAAALAHHPR------LTSLNLGRNRIGPNGAQHLAKSATLTELDLSENRI 538



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 160/348 (45%), Gaps = 72/348 (20%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S++ S    GD G+   A+    N    +++ A N I  AG +A    L+ N +L  L
Sbjct: 288 LKSLNASNNGIGDAGVLGFAD----NAVLTQLNLAGNMIGPAGARA----LRCNTSLTEL 339

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N +GD G +    +L  N  +  L L   ++ D+G +A+A     N+ L+ L L+ 
Sbjct: 340 DLSTNRLGDAGAQ----VLAANRSLTSLNLRHNEIGDDGTEALAR----NTTLKSLNLSY 391

Query: 284 NMIDYSGFTSL--------------------AEALLENSTIRSLHLNGNYGGALGANALA 323
           N I + G  +L                    A AL  N+++ SLHL  N  G  GA A+A
Sbjct: 392 NPIGFWGAGALGGSTTLRELDLRCCAIDPYGASALARNTSLASLHLGSNRIGDSGARAIA 451

Query: 324 --------------------KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
                               + L GN SL  L+L+GN + D+G  AL     +   +L  
Sbjct: 452 TSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAAL-----AHHPRLTS 506

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L++G N I   GA H+A+      +L  ++L  N IG EGA    DAL  +  +TT+++ 
Sbjct: 507 LNLGRNRIGPNGAQHLAK----SATLTELDLSENRIGPEGA----DALSLSTVLTTLNVS 558

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
            N I  KGA A A   + ++ +TSLD   N +G  GAK L    +  G
Sbjct: 559 DNAIGEKGARAFA---EKSTSLTSLDARNNGMGEAGAKMLEANTRLTG 603


>gi|188501447|gb|ACD54580.1| unknown [Adineta vaga]
          Length = 264

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 140/250 (56%), Gaps = 9/250 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           RA SS+ +  + F D+ +  +   L  N   EE++  ++ IT+ G+      L  N  LK
Sbjct: 4   RALSSIKLCDQAFLDDDMVIIGIELAVNNNCEELTLRSSDITSIGVTHLGLGLTINCTLK 63

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L+LSGNP+   GV  L  +L  N+ + +L L+SV++ DEG + +A +L  N  L  L +
Sbjct: 64  SLDLSGNPLSATGVANLARVLHHNSTLLKLHLNSVNMGDEGVQTLASMLHKNHTLDFLAI 123

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLN----GNYGGALGANALAKGLEGNKSLRELHL 337
           +NN +  +G  +L EAL  N++++ LHL+    GN GGAL    + + +  N++LR++++
Sbjct: 124 SNNQLTATGLRALCEALETNTSLKFLHLSENNLGNEGGAL----VGRLVLNNETLRKIYM 179

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           +   IGD G+  +++ L  +   L  L +GNN I+ +    +AE I+  ++L    L+ N
Sbjct: 180 NSMGIGDSGLAIMLNAL-KKNETLQKLTVGNNFITDRSVQSIAEMIQANQTLEIFELWKN 238

Query: 398 DIGDEGAEKI 407
            + D   E++
Sbjct: 239 SLSDTAEERL 248



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 5/250 (2%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           AL ++ L      D+ +  +   L  N   E L L S D+   G   +   L  N  L+ 
Sbjct: 5   ALSSIKLCDQAFLDDDMVIIGIELAVNNNCEELTLRSSDITSIGVTHLGLGLTINCTLKS 64

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+ N +  +G  +LA  L  NST+  LHLN    G  G   LA  L  N +L  L + 
Sbjct: 65  LDLSGNPLSATGVANLARVLHHNSTLLKLHLNSVNMGDEGVQTLASMLHKNHTLDFLAIS 124

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +   G+RAL   L +    L  L +  N++  +G   V   + N ++L  I  YMN 
Sbjct: 125 NNQLTATGLRALCEALETNTS-LKFLHLSENNLGNEGGALVGRLVLNNETLRKI--YMNS 181

Query: 399 --IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
             IGD G   + +ALK+N T+  + +G N I  +   +IA +++ N  +   +L  N + 
Sbjct: 182 MGIGDSGLAIMLNALKKNETLQKLTVGNNFITDRSVQSIAEMIQANQTLEIFELWKNSLS 241

Query: 457 ADGAKALSEV 466
               + L ++
Sbjct: 242 DTAEERLRKI 251



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 2/214 (0%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +  EL L  + I   G+  L  GL+     L  LD+  N +SA G  ++A  + +  +
Sbjct: 31  NNNCEELTLRSSDITSIGVTHLGLGLTI-NCTLKSLDLSGNPLSATGVANLARVLHHNST 89

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           LL ++L   ++GDEG + +A  L +N T+  + +  N + + G  A+   L+ N+ +  L
Sbjct: 90  LLKLHLNSVNMGDEGVQTLASMLHKNHTLDFLAISNNQLTATGLRALCEALETNTSLKFL 149

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L+ N +G +G   +  ++  +  +  + +    IG SG   + + L+ N T+  L +  
Sbjct: 150 HLSENNLGNEGGALVGRLVLNNETLRKIYMNSMGIGDSGLAIMLNALKKNETLQKLTVGN 209

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           N + D   + +A+  +  N+ L   +L  N + D
Sbjct: 210 NFITDRSVQSIAEMIQ-ANQTLEIFELWKNSLSD 242



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 1/156 (0%)

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D+    I   L  N     + L  ++I S G + +   L  N  + SLDL+ NP+ A G 
Sbjct: 18  DDDMVIIGIELAVNNNCEELTLRSSDITSIGVTHLGLGLTINCTLKSLDLSGNPLSATGV 77

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
             L+ VL  +  +  L L    +G  G + +A ML  N+T+  L +  N L   G + L 
Sbjct: 78  ANLARVLHHNSTLLKLHLNSVNMGDEGVQTLASMLHKNHTLDFLAISNNQLTATGLRALC 137

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           ++ +  N +L  + L+ N + ++G   + + +  NE
Sbjct: 138 EALE-TNTSLKFLHLSENNLGNEGGALVGRLVLNNE 172


>gi|154341352|ref|XP_001566629.1| ribonuclease inhibitor-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063952|emb|CAM40143.1| ribonuclease inhibitor-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 735

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 177/342 (51%), Gaps = 17/342 (4%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL- 309
           L LS   LRD+GA+ IA+L+K N  L  +++ +N I + G   LA ALLEN T+ SL + 
Sbjct: 175 LDLSGNRLRDDGARFIAQLIKRNRTLVHIDVASNDIGHVGGVLLARALLENDTVISLDIG 234

Query: 310 -----NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
                NGN+ G  GA A  + L  NK L  L++  N +G  G+  + S L   +  L  L
Sbjct: 235 ARAGTNGNHIGTPGAEAFGEVLRRNKVLARLNVSSNGLGAVGVAFIASALEHSRS-LTCL 293

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-----KQNRTITT 419
           ++ +N++   GA  +A  ++      W  L  N +GD+G   + DAL       +  +  
Sbjct: 294 NLSSNNLGFDGARVLASRLEVAHVTRW-ELPRNYLGDKGGACLLDALAGAIRNGHDVVEY 352

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +DL  N +  + A A+ +VL  ++ + +L L  N +GA G KA+S  L  + ++ +L L 
Sbjct: 353 LDLDDNTLGERSAEAVGKVLSASATLVTLRLNGNLLGA-GVKAISTGLNENHSLKSLFLR 411

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
            C I   GA  +   L  N T+  LD+  N ++D GA  LA+    VN+ LT  +++ N 
Sbjct: 412 KCSIDQIGAAALGATLYVNYTLGQLDVSNNRVKDGGAVELAKGL-AVNKCLTMCNVSSNR 470

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           I   G   +A+A++ N    +  LNL +N + +    A++D+
Sbjct: 471 IGHVGGLEMAKAIQKNR--TLRHLNLRHNLMLEATGEAISDS 510



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 200/433 (46%), Gaps = 46/433 (10%)

Query: 170 SGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP 229
           +G + G  G     E L  N+    ++ ++NG+ A G+      L+ + +L  LNLS N 
Sbjct: 240 NGNHIGTPGAEAFGEVLRRNKVLARLNVSSNGLGAVGVAFIASALEHSRSLTCLNLSSNN 299

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA----KAIAELLKN-NSILRVLELNNN 284
           +G +G + L   L + A V R +L    L D+G      A+A  ++N + ++  L+L++N
Sbjct: 300 LGFDGARVLASRL-EVAHVTRWELPRNYLGDKGGACLLDALAGAIRNGHDVVEYLDLDDN 358

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +      ++ + L  ++T+ +L LNGN  GA G  A++ GL  N SL+ L L   SI  
Sbjct: 359 TLGERSAEAVGKVLSASATLVTLRLNGNLLGA-GVKAISTGLNENHSLKSLFLRKCSIDQ 417

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G  AL + L      L  LD+ NN +   GA  +A+ +   K L   N+  N IG  G 
Sbjct: 418 IGAAALGATLYV-NYTLGQLDVSNNRVKDGGAVELAKGLAVNKCLTMCNVSSNRIGHVGG 476

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            ++A A+++NRT+  ++L  N +      AI+   + N  +  LD++YN      A ++ 
Sbjct: 477 LEMAKAIQKNRTLRHLNLRHNLMLEATGEAISDSFRINKTLERLDVSYNDFSYACAMSIE 536

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
             L+ +              AS           N T+ +  L+AN         LA   K
Sbjct: 537 RALERN-------------KAS-----------NKTLLVPRLQAN------IDALAPKEK 566

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF--LTKFGQ--SALTD 580
            +N A+  I+L    +RD G     + ++  E+  V +  L      L +  +  SAL+D
Sbjct: 567 ELNRAVEDIELEKRMVRDRG----EELMRRGEEARVVAEKLRREITDLERVFEKASALSD 622

Query: 581 AKDLVYEMSEKEV 593
           A + ++ ++E  V
Sbjct: 623 AAENLFRLTEDRV 635



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 10/174 (5%)

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           NR  + +DL GN +   GA  IA+++K N  +  +D+A N IG  G   L+  L  +  +
Sbjct: 169 NRHYSVLDLSGNRLRDDGARFIAQLIKRNRTLVHIDVASNDIGHVGGVLLARALLENDTV 228

Query: 474 NTLKLGW------CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
            +L +G         IG  GAE   ++LR N  ++ L++ +NGL   G   +A + +  +
Sbjct: 229 ISLDIGARAGTNGNHIGTPGAEAFGEVLRRNKVLARLNVSSNGLGAVGVAFIASALE-HS 287

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            +LT ++L+ N +  DGA  +A  L   E   VT   L  N+L   G + L DA
Sbjct: 288 RSLTCLNLSSNNLGFDGARVLASRL---EVAHVTRWELPRNYLGDKGGACLLDA 338


>gi|330840905|ref|XP_003292448.1| hypothetical protein DICPUDRAFT_50441 [Dictyostelium purpureum]
 gi|325077316|gb|EGC31037.1| hypothetical protein DICPUDRAFT_50441 [Dictyostelium purpureum]
          Length = 1029

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 158/335 (47%), Gaps = 30/335 (8%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TLNL G   G + +K   +IL  N  +  L LSS  L +   + +AE +K N+ ++ L +
Sbjct: 486 TLNLEGINFGKKALKPFLNILTRNQDLTFLDLSSSQLSESNGELLAEFIKKNNTIQTLNI 545

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +NN + Y     +A+AL  N +I SL L+      L    LAK L  N  +++L++    
Sbjct: 546 SNNDL-YEKTIDIADALQSNKSITSLSLSNTKSSNLIGKVLAKSLCVNHYIKKLNISHTK 604

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I   GI  L  GL   K  L  L + +                             D+ D
Sbjct: 605 ISHSGIIELAQGLKENKIHLENLILDDT----------------------------DLQD 636

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +GA +I DALK N+ + T+ L  N+I+S GA +I + LK NS +  L L YN IGA G +
Sbjct: 637 KGASEIGDALKTNQYLQTLHLNFNSINSSGAKSIGKALKYNSSLKVLQLGYNEIGAKGLE 696

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           ++S+ LK +  +  L +    I   G   + + L+ N  +  ++ R N L  +G+  L +
Sbjct: 697 SISKSLKVNKTLIELSVKNNLIPEKGGLALTEALKVNQKLESINFRGNFLGIKGSAALTK 756

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
                N+ LT +DL+ N +       + Q LK N+
Sbjct: 757 -LLTSNQTLTFMDLSHNNLEKSITHKVHQLLKKNQ 790



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 2/214 (0%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
           LA+SL  N   ++++ +   I+ +GI     G+ ++ I L+ L L    + D+G   + D
Sbjct: 585 LAKSLCVNHYIKKLNISHTKISHSGIIELAQGLKENKIHLENLILDDTDLQDKGASEIGD 644

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L  N  ++ L L+   +   GAK+I + LK NS L+VL+L  N I   G  S++++L  
Sbjct: 645 ALKTNQYLQTLHLNFNSINSSGAKSIGKALKYNSSLKVLQLGYNEIGAKGLESISKSLKV 704

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N T+  L +  N     G  AL + L+ N+ L  ++  GN +G +G  AL   L+S +  
Sbjct: 705 NKTLIELSVKNNLIPEKGGLALTEALKVNQKLESINFRGNFLGIKGSAALTKLLTSNQ-T 763

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L  +D+ +N++       V + +K  +    INL
Sbjct: 764 LTFMDLSHNNLEKSITHKVHQLLKKNQITNTINL 797



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 5/130 (3%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL-HGNSIGD-EGIRALMSGLSS 356
           L+ S ++++HL  N    L +  +++ L+   S+  L+L H  SI + E   AL   L +
Sbjct: 176 LKYSCLQTVHLRLNSSQELIS--ISEALKQRHSITHLNLSHNKSIKELESWIALGLALKA 233

Query: 357 RKGKLAVLDIGNNSISAKG-AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
               L  L++ +NS+   G +  +++ IK  +S+ WINL  N++  +    I + L+ N+
Sbjct: 234 PNQTLNQLNLSHNSLGTDGLSLIISDIIKTNRSINWINLSHNNLDQDENHSILETLQYNQ 293

Query: 416 TITTIDLGGN 425
           TIT +DL  N
Sbjct: 294 TITYLDLSNN 303



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 59/256 (23%)

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           YI     +L +NL   + G +  +   + L +N+ +T +DL  + +       +A  +K 
Sbjct: 477 YIAPHNPILTLNLEGINFGKKALKPFLNILTRNQDLTFLDLSSSQLSESNGELLAEFIKK 536

Query: 442 NSVITSLDLAYNPIG------ADG---------------------AKALSEVLKFHGNIN 474
           N+ I +L+++ N +       AD                       K L++ L  +  I 
Sbjct: 537 NNTIQTLNISNNDLYEKTIDIADALQSNKSITSLSLSNTKSSNLIGKVLAKSLCVNHYIK 596

Query: 475 TLKLGWCQIGAS-----------------------------GAEFVADMLRYNNTISILD 505
            L +   +I  S                             GA  + D L+ N  +  L 
Sbjct: 597 KLNISHTKISHSGIIELAQGLKENKIHLENLILDDTDLQDKGASEIGDALKTNQYLQTLH 656

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           L  N +   GAK + ++ K  N +L  + L +NEI   G  +I+++LK N+   +  L++
Sbjct: 657 LNFNSINSSGAKSIGKALK-YNSSLKVLQLGYNEIGAKGLESISKSLKVNK--TLIELSV 713

Query: 566 ANNFLTKFGQSALTDA 581
            NN + + G  ALT+A
Sbjct: 714 KNNLIPEKGGLALTEA 729



 Score = 47.4 bits (111), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 52/108 (48%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G +GL  +++SL  N+T  E+S   N I   G  A    L+ N  L+++N  GN +G +
Sbjct: 690 IGAKGLESISKSLKVNKTLIELSVKNNLIPEKGGLALTEALKVNQKLESINFRGNFLGIK 749

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           G   L  +L  N  +  + LS  +L       + +LLK N I   + L
Sbjct: 750 GSAALTKLLTSNQTLTFMDLSHNNLEKSITHKVHQLLKKNQITNTINL 797



 Score = 43.1 bits (100), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 97/418 (23%), Positives = 166/418 (39%), Gaps = 88/418 (21%)

Query: 245 NAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           N  + +L LS   L  +G +  I++++K N  +  + L++N +D     S+ E L  N T
Sbjct: 235 NQTLNQLNLSHNSLGTDGLSLIISDIIKTNRSINWINLSHNNLDQDENHSILETLQYNQT 294

Query: 304 IRSLHLNGN-YGGALGANA-LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS---SRK 358
           I  L L+ N Y  +L  +  L   +E ++SL  L+   NS      R  +SGL    S  
Sbjct: 295 ITYLDLSNNEYQLSLDVSPRLCSYIERSQSLTHLNFSHNS-----NRHPLSGLPRALSIN 349

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL---YMNDIGDEGAEKIADA----- 410
             L  +DI   +I    +  + + +   K L  INL    ++++ +     I +A     
Sbjct: 350 QSLRQIDISCMTILPSESIDLLKVLIGSKFLTSINLQQVLLSNVNESFGVCIVNALAKRY 409

Query: 411 ----LKQNRTITTID----------------LGGNNIHSKGAS----AIARVLKDNSVIT 446
               L+    I+ ID                +  N IHS   S      +     +S  +
Sbjct: 410 NDYDLEDESCISFIDSTNSSSNNLNPSQTTVIVSNGIHSTNTSDNMITFSPSCSFSSSKS 469

Query: 447 SLD------LAYNPI----------GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           S+D        +NPI          G    K    +L  + ++  L L   Q+  S  E 
Sbjct: 470 SVDDDEFYIAPHNPILTLNLEGINFGKKALKPFLNILTRNQDLTFLDLSSSQLSESNGEL 529

Query: 491 VADMLRYNNTISILDLRANGLRDEG---------------------------AKCLAQSF 523
           +A+ ++ NNTI  L++  N L ++                             K LA+S 
Sbjct: 530 LAEFIKKNNTIQTLNISNNDLYEKTIDIADALQSNKSITSLSLSNTKSSNLIGKVLAKSL 589

Query: 524 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             VN  +  ++++  +I   G   +AQ LK N+ + + +L L +  L   G S + DA
Sbjct: 590 -CVNHYIKKLNISHTKISHSGIIELAQGLKENK-IHLENLILDDTDLQDKGASEIGDA 645


>gi|320167080|gb|EFW43979.1| hypothetical protein CAOG_02004 [Capsaspora owczarzaki ATCC 30864]
          Length = 285

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 125/207 (60%), Gaps = 3/207 (1%)

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           Y +  K+  W++L+ ++ G  GA  +A+ALK N  +T +DL  N I  +GA AIA  LK 
Sbjct: 11  YHQVTKASGWLSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDQGAQAIAEALKV 70

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ +  LDL  N IG  GA+A +E LK + ++  L L   +IG +GA+ +A  +  N T+
Sbjct: 71  NTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTL 130

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N + D GA+ +A++ + VN  +  +DL  N+I D GA AIA+ALK N+   +T
Sbjct: 131 TKLHLYQNQIGDAGAQAIAEALR-VNTTVNQLDLWANQIGDIGAQAIAEALKVNK--TLT 187

Query: 562 SLNLANNFLTKFGQSALTDAKDLVYEM 588
           S+ L +NFLT+ G +AL +  +   E+
Sbjct: 188 SIRLEDNFLTEAGITALRETGNTSCEL 214



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 107/185 (57%), Gaps = 1/185 (0%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +  +     GA  VAE +K   ++  ++LY N IGD+GA+ IA+ALK N T+  +DL 
Sbjct: 21  LSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDQGAQAIAEALKVNTTVAVLDLR 80

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I   GA A A  LK N  +  L L  N IG  GA+A++  +  +  +  L L   QI
Sbjct: 81  ENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQI 140

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G +GA+ +A+ LR N T++ LDL AN + D GA+ +A++ K VN+ LTSI L  N + + 
Sbjct: 141 GDAGAQAIAEALRVNTTVNQLDLWANQIGDIGAQAIAEALK-VNKTLTSIRLEDNFLTEA 199

Query: 544 GAFAI 548
           G  A+
Sbjct: 200 GITAL 204



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 29/216 (13%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L  +  G  GA A+A+ L+ N ++  L L+ N IGD+G +A                 
Sbjct: 21  LSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDQGAQA----------------- 63

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
                       +AE +K   ++  ++L  N IGD GAE  A+ALK N+++  + L  N 
Sbjct: 64  ------------IAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNR 111

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I   GA AIAR +  N+ +T L L  N IG  GA+A++E L+ +  +N L L   QIG  
Sbjct: 112 IGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDI 171

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           GA+ +A+ L+ N T++ + L  N L + G   L ++
Sbjct: 172 GAQAIAEALKVNKTLTSIRLEDNFLTEAGITALRET 207



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 29/213 (13%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  +  G  G   + + L  N  V  L L    + D+GA+AIAE LK N+ + VL+L 
Sbjct: 21  LSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDQGAQAIAEALKVNTTVAVLDLR 80

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  + AEAL  N ++  L+L  N  G  GA A+A+ +  N +L +LHL+ N I
Sbjct: 81  ENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQI 140

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A                             +AE ++   ++  ++L+ N IGD 
Sbjct: 141 GDAGAQA-----------------------------IAEALRVNTTVNQLDLWANQIGDI 171

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           GA+ IA+ALK N+T+T+I L  N +   G +A+
Sbjct: 172 GAQAIAEALKVNKTLTSIRLEDNFLTEAGITAL 204



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 87/176 (49%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           G  G   +AE+L  N     +    N I   G +A    L+ N  +  L+L  N IGD G
Sbjct: 29  GCAGAMAVAEALKVNTAVTGLDLYQNQIGDQGAQAIAEALKVNTTVAVLDLRENQIGDAG 88

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            +   + L  N  V  L L    + D GA+AIA  +  N+ L  L L  N I  +G  ++
Sbjct: 89  AEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAI 148

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           AEAL  N+T+  L L  N  G +GA A+A+ L+ NK+L  + L  N + + GI AL
Sbjct: 149 AEALRVNTTVNQLDLWANQIGDIGAQAIAEALKVNKTLTSIRLEDNFLTEAGITAL 204



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 81/154 (52%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG  A    L+ N A+  L+L  N IGD+G + + + L  N  V  L L    + D GA+
Sbjct: 31  AGAMAVAEALKVNTAVTGLDLYQNQIGDQGAQAIAEALKVNTTVAVLDLRENQIGDAGAE 90

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A AE LK N  +  L L  N I  +G  ++A A++ N+T+  LHL  N  G  GA A+A+
Sbjct: 91  AFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAE 150

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
            L  N ++ +L L  N IGD G +A+   L   K
Sbjct: 151 ALRVNTTVNQLDLWANQIGDIGAQAIAEALKVNK 184



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 90/183 (49%), Gaps = 10/183 (5%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A + +D+     GD+G   +AE+L  N T   +    N I  AG +AF   L+ N ++  
Sbjct: 45  AVTGLDLYQNQIGDQGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVE 104

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L  N IGD G + +   +V N  + +L L    + D GA+AIAE L+ N+ +  L+L 
Sbjct: 105 LYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLW 164

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK----------GLEGNKSL 332
            N I   G  ++AEAL  N T+ S+ L  N+    G  AL +           LEG   L
Sbjct: 165 ANQIGDIGAQAIAEALKVNKTLTSIRLEDNFLTEAGITALRETGNTSCELNFSLEGCMVL 224

Query: 333 REL 335
           +EL
Sbjct: 225 QEL 227



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 75/155 (48%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           +  ++  +  Q + E  K     + +D+     GD G    AE+L  N++  E+    N 
Sbjct: 52  YQNQIGDQGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNR 111

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I  AG +A    +  N  L  L+L  N IGD G + + + L  N  V +L L +  + D 
Sbjct: 112 IGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDI 171

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
           GA+AIAE LK N  L  + L +N +  +G T+L E
Sbjct: 172 GAQAIAEALKVNKTLTSIRLEDNFLTEAGITALRE 206


>gi|344170515|emb|CCA82933.1| leucine-rich-repeat type III effector protein (GALA5) [blood
           disease bacterium R229]
          Length = 533

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 138/425 (32%), Positives = 204/425 (48%), Gaps = 77/425 (18%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           F D  L  L  SL    T  ++S     ITAAGI        S++ L  LN+    IG E
Sbjct: 129 FTDNDLRGLPASL----TELDLSRCRGPITAAGIAHL-----SHLPLVRLNVRDQRIGVE 179

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G +    +L ++  +  L +S+  +  EGA+A+A     N+ L  L +++N I   G  +
Sbjct: 180 GAR----LLANHPTLTSLDVSNGRIGPEGARALA----GNTRLTTLSVSHNRIGAEGAKA 231

Query: 294 LAE--------------------ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           LA                     AL  N+ + +L++N N  G  GA ALA G    ++L 
Sbjct: 232 LAASETLTSLDISENGIGDEGACALATNTKLTALNVNRNRIGVEGAKALAAG----EALT 287

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L + GN IGDEG+RAL +       +L  L++    + A G   +A      K+L  + 
Sbjct: 288 SLDIGGNDIGDEGVRALAA-----NARLTTLNVERTRVGADGVGALAA----SKTLTSLR 338

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           +  N+IGD GA     AL  N ++TT+ +  N I   GA A+A     N+ +T+L+L YN
Sbjct: 339 IDSNNIGDAGAR----ALATNTSLTTLHIESNGISPAGAQALA----ANTTLTTLNLGYN 390

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A      +  N   + L   + G S A   A  L  + T++ LD   N +RD
Sbjct: 391 GIGDAGAQA------WSANTTLISLSVRRNGLSDAG--ATTLAASKTLTTLDAGDNTIRD 442

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA+ LA      N  LT++D+  NEI + G    A+AL AN  +A  SL+L NN +T+ 
Sbjct: 443 AGARALA-----ANRTLTTLDVRSNEIENAG----ARALAANTGLA--SLDLRNNRVTEA 491

Query: 574 GQSAL 578
           G  AL
Sbjct: 492 GVRAL 496



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 147/311 (47%), Gaps = 44/311 (14%)

Query: 156 EFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L A    +S+D+S    GDEG    A +L  N     ++   N I   G KA   
Sbjct: 227 EGAKALAASETLTSLDISENGIGDEG----ACALATNTKLTALNVNRNRIGVEGAKA--- 279

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L +  AL +L++ GN IGDEGV+ L       A   RL   +V+    GA  +  L  +
Sbjct: 280 -LAAGEALTSLDIGGNDIGDEGVRAL-------AANARLTTLNVERTRVGADGVGALAAS 331

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            + L  L +++N I  +G    A AL  N+++ +LH+  N     GA ALA     N +L
Sbjct: 332 KT-LTSLRIDSNNIGDAG----ARALATNTSLTTLHIESNGISPAGAQALA----ANTTL 382

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L+L  N IGD G +A      S    L  L +  N +S  GA  +A      K+L  +
Sbjct: 383 TTLNLGYNGIGDAGAQAW-----SANTTLISLSVRRNGLSDAGATTLAA----SKTLTTL 433

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +   N I D GA     AL  NRT+TT+D+  N I + G    AR L  N+ + SLDL  
Sbjct: 434 DAGDNTIRDAGAR----ALAANRTLTTLDVRSNEIENAG----ARALAANTGLASLDLRN 485

Query: 453 NPIGADGAKAL 463
           N +   G +AL
Sbjct: 486 NRVTEAGVRAL 496



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 36/217 (16%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I+A G  H++        L+ +N+    IG EGA  +A+    + T+T++D+    I  +
Sbjct: 153 ITAAGIAHLSHL-----PLVRLNVRDQRIGVEGARLLAN----HPTLTSLDVSNGRIGPE 203

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKAL--SEVLKFHGNINTLKLGWCQIGASGA 488
           GA    R L  N+ +T+L +++N IGA+GAKAL  SE L       +L +    IG  GA
Sbjct: 204 GA----RALAGNTRLTTLSVSHNRIGAEGAKALAASETL------TSLDISENGIGDEGA 253

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
             +A     N  ++ L++  N +  EGAK LA       EALTS+D+  N+I D+G  A+
Sbjct: 254 CALA----TNTKLTALNVNRNRIGVEGAKALA-----AGEALTSLDIGGNDIGDEGVRAL 304

Query: 549 AQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
           A       +  +T+LN+    +   G  AL  +K L 
Sbjct: 305 AA------NARLTTLNVERTRVGADGVGALAASKTLT 335



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 68/301 (22%)

Query: 156 EFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L    A +S+D+ G + GDEG+  LA                             
Sbjct: 275 EGAKALAAGEALTSLDIGGNDIGDEGVRALA----------------------------- 305

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
              +N  L TLN+    +G +GV  L      +  +  L++ S ++ D GA+A+A     
Sbjct: 306 ---ANARLTTLNVERTRVGADGVGALA----ASKTLTSLRIDSNNIGDAGARALA----T 354

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L + +N I  +G    A+AL  N+T+ +L+L  N  G  GA A +     N +L
Sbjct: 355 NTSLTTLHIESNGISPAG----AQALAANTTLTTLNLGYNGIGDAGAQAWS----ANTTL 406

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L +  N + D G   L +  +     L  LD G+N+I   GA  +A      ++L  +
Sbjct: 407 ISLSVRRNGLSDAGATTLAASKT-----LTTLDAGDNTIRDAGARALAAN----RTLTTL 457

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++  N+I + GA     AL  N  + ++DL  N +   G     R L  N  ++SL +++
Sbjct: 458 DVRSNEIENAGAR----ALAANTGLASLDLRNNRVTEAG----VRALLANRTLSSLGVSF 509

Query: 453 N 453
           N
Sbjct: 510 N 510


>gi|320168146|gb|EFW45045.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 645

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 147/268 (54%), Gaps = 5/268 (1%)

Query: 285 MIDYSGFTSLAEALLE--NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           M+ Y   T   + L +      + L L     G   A A+A+ ++ N ++ EL L GN I
Sbjct: 1   MLSYQNMTEKQQKLFDMVEDASQLLDLCKKQIGNADAKAVAEAIKVNTTMTELKLGGNLI 60

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            D G RA+   + +    L V+D+  N I   GA   AE +K   +L  ++L  N IGD 
Sbjct: 61  ADVGARAIAEAVRA-NCTLTVVDLAENRIGDAGARAFAETLKVNNTLTKLDLNENQIGDA 119

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N+T+T + L  N I + GA AIA  LK N+ +T L L  NPIG DGA+A
Sbjct: 120 GAQAIAEALKVNKTLTVLYLWHNQIGAAGAQAIADALKVNTTLTELYLYKNPIGDDGAQA 179

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           ++E L+ +  +  L L   QI  +GA+ +A+ L+ N T++ L L  N + D GA+ +A++
Sbjct: 180 IAEALEVNTTLTKLYLWENQITCTGAQALAEALKANTTLTELTLGENQIGDAGARAIAEA 239

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
            K VNE LT + L  N +  DG  A  Q
Sbjct: 240 LK-VNETLTML-LNNNFLTTDGIAAFRQ 265



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 146/302 (48%), Gaps = 35/302 (11%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E +Q L +  ++  A   +D+  +  G+     +AE++  N T  E+    N I   G +
Sbjct: 9   EKQQKLFDMVED--ASQLLDLCKKQIGNADAKAVAEAIKVNTTMTELKLGGNLIADVGAR 66

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    +++N  L  ++L+ N IGD G +   + L  N  + +L L+   + D GA+AIAE
Sbjct: 67  AIAEAVRANCTLTVVDLAENRIGDAGARAFAETLKVNNTLTKLDLNENQIGDAGAQAIAE 126

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N  L VL L +N I  +G  ++A+AL  N+T+  L+L  N  G  GA A+A+ LE 
Sbjct: 127 ALKVNKTLTVLYLWHNQIGAAGAQAIADALKVNTTLTELYLYKNPIGDDGAQAIAEALEV 186

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L +L+L                               N I+  GA  +AE +K   +
Sbjct: 187 NTTLTKLYLW-----------------------------ENQITCTGAQALAEALKANTT 217

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  + L  N IGD GA  IA+ALK N T+T + L  N + + G   IA   +  + I  L
Sbjct: 218 LTELTLGENQIGDAGARAIAEALKVNETLTML-LNNNFLTTDG---IAAFRQTGNAICDL 273

Query: 449 DL 450
           DL
Sbjct: 274 DL 275


>gi|340052758|emb|CCC47042.1| putative ribonuclease inhibitor-like protein [Trypanosoma vivax
           Y486]
          Length = 735

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 183/354 (51%), Gaps = 19/354 (5%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +G    + +  IL  N     L LS   L D GA  IA+L+  N  L  + L +N I + 
Sbjct: 144 LGPTCAEVIAHILSSNTKYIILDLSGNRLLDAGACFIAKLISVNRTLVHIGLRSNDIGHV 203

Query: 290 GFTSLAEALLENSTIRSLH------LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           G  +LA ALL+N+T+ SL       +NGN+    GA A+   L  NK L  L+L  N +G
Sbjct: 204 GGEALANALLQNNTVVSLDVGAHSGINGNHIATEGAKAIGNVLRTNKVLSNLNLSSNGLG 263

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             GI  + +GL      L  LDI  N +   G   +++ ++N  S+  ++L  N+I D G
Sbjct: 264 VPGITHIAAGLDGNYS-LTHLDISVNGLGYAGVKIISQVLEN-SSITHLSLQRNNITDNG 321

Query: 404 A----EKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
                + IA A++     I  +++  N ++ K A A+ +VL  +S + +L ++ N  G+ 
Sbjct: 322 GMVLFQAIATAIENGEDRIEFLNVESNELNEKTAKALQKVLSTSSALKNLRVSSNGFGS- 380

Query: 459 GAKALSEVLKFHGNINTLKLGWCQI-GASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
            +K + E L  +  +N+L + +C+I    GA F    L  N+T+  LDL  N LRD G  
Sbjct: 381 SSKFIMEGLVENKGLNSLHMSFCEIRDTDGAPF-GTALSANSTLQHLDLSNNKLRDAGTI 439

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
           C+A++ K  N  L +++LA N+I D+G  AIA  L++N    +  LNL  N ++
Sbjct: 440 CIAEAMK-TNAGLVTLNLACNKITDEGGKAIAMFLRSNN--TLRDLNLRRNCMS 490



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 172/364 (47%), Gaps = 17/364 (4%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN-- 224
           +D+SG    D G  F+A+ +  N+T   +   +N I   G +A    L  N  + +L+  
Sbjct: 165 LDLSGNRLLDAGACFIAKLISVNRTLVHIGLRSNDIGHVGGEALANALLQNNTVVSLDVG 224

Query: 225 ----LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
               ++GN I  EG K + ++L  N  +  L LSS  L   G   IA  L  N  L  L+
Sbjct: 225 AHSGINGNHIATEGAKAIGNVLRTNKVLSNLNLSSNGLGVPGITHIAAGLDGNYSLTHLD 284

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY----GGALGANALAKGLE-GNKSLREL 335
           ++ N + Y+G   +++ +LENS+I  L L  N     GG +   A+A  +E G   +  L
Sbjct: 285 ISVNGLGYAGVKIISQ-VLENSSITHLSLQRNNITDNGGMVLFQAIATAIENGEDRIEFL 343

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           ++  N + ++  +AL   LS+    L  L + +N   +   F +   ++N K L  +++ 
Sbjct: 344 NVESNELNEKTAKALQKVLSTSSA-LKNLRVSSNGFGSSSKFIMEGLVEN-KGLNSLHMS 401

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
             +I D        AL  N T+  +DL  N +   G   IA  +K N+ + +L+LA N I
Sbjct: 402 FCEIRDTDGAPFGTALSANSTLQHLDLSNNKLRDAGTICIAEAMKTNAGLVTLNLACNKI 461

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
             +G KA++  L+ +  +  L L    +  S  E + + LR N T+  +D+  N   D  
Sbjct: 462 TDEGGKAIAMFLRSNNTLRDLNLRRNCMSHSTGELLDEQLRSNTTLEKMDVTYN---DFP 518

Query: 516 AKCL 519
            KCL
Sbjct: 519 YKCL 522



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 132/248 (53%), Gaps = 16/248 (6%)

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           +++ + S   K  +LD+  N +   GA  +A+ I   ++L+ I L  NDIG  G E +A+
Sbjct: 151 VIAHILSSNTKYIILDLSGNRLLDAGACFIAKLISVNRTLVHIGLRSNDIGHVGGEALAN 210

Query: 410 ALKQNRTITTIDLG------GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           AL QN T+ ++D+G      GN+I ++GA AI  VL+ N V+++L+L+ N +G  G   +
Sbjct: 211 ALLQNNTVVSLDVGAHSGINGNHIATEGAKAIGNVLRTNKVLSNLNLSSNGLGVPGITHI 270

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
           +  L  + ++  L +    +G +G + ++ +L  N++I+ L L+ N + D G   L Q+ 
Sbjct: 271 AAGLDGNYSLTHLDISVNGLGYAGVKIISQVLE-NSSITHLSLQRNNITDNGGMVLFQAI 329

Query: 524 KVVNE----ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL---TKFGQS 576
               E     +  +++  NE+ +  A A+ + L  +   A+ +L +++N     +KF   
Sbjct: 330 ATAIENGEDRIEFLNVESNELNEKTAKALQKVLSTSS--ALKNLRVSSNGFGSSSKFIME 387

Query: 577 ALTDAKDL 584
            L + K L
Sbjct: 388 GLVENKGL 395



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 136/297 (45%), Gaps = 36/297 (12%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  S++++S    G  G+  +A  L  N +   +  + NG+  AG+K    VL+ N ++ 
Sbjct: 250 KVLSNLNLSSNGLGVPGITHIAAGLDGNYSLTHLDISVNGLGYAGVKIISQVLE-NSSIT 308

Query: 222 TLNLSGNPIGDEGVKCLCDIL---VDNAG--VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
            L+L  N I D G   L   +   ++N    +E L + S +L ++ AKA+ ++L  +S L
Sbjct: 309 HLSLQRNNITDNGGMVLFQAIATAIENGEDRIEFLNVESNELNEKTAKALQKVLSTSSAL 368

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           + L +++N     GF S ++ ++E                        GL  NK L  LH
Sbjct: 369 KNLRVSSN-----GFGSSSKFIME------------------------GLVENKGLNSLH 399

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           +    I D       + LS+    L  LD+ NN +   G   +AE +K    L+ +NL  
Sbjct: 400 MSFCEIRDTDGAPFGTALSA-NSTLQHLDLSNNKLRDAGTICIAEAMKTNAGLVTLNLAC 458

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           N I DEG + IA  L+ N T+  ++L  N +       +   L+ N+ +  +D+ YN
Sbjct: 459 NKITDEGGKAIAMFLRSNNTLRDLNLRRNCMSHSTGELLDEQLRSNTTLEKMDVTYN 515



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 11/203 (5%)

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           NCK   +  L  + +G   AE IA  L  N     +DL GN +   GA  IA+++  N  
Sbjct: 131 NCKGTFFC-LKESGLGPTCAEVIAHILSSNTKYIILDLSGNRLLDAGACFIAKLISVNRT 189

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC------QIGASGAEFVADMLRYN 498
           +  + L  N IG  G +AL+  L  +  + +L +G         I   GA+ + ++LR N
Sbjct: 190 LVHIGLRSNDIGHVGGEALANALLQNNTVVSLDVGAHSGINGNHIATEGAKAIGNVLRTN 249

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
             +S L+L +NGL   G   +A      N +LT +D++ N +   G   I+Q L   E+ 
Sbjct: 250 KVLSNLNLSSNGLGVPGITHIAAGLD-GNYSLTHLDISVNGLGYAGVKIISQVL---ENS 305

Query: 559 AVTSLNLANNFLTKFGQSALTDA 581
           ++T L+L  N +T  G   L  A
Sbjct: 306 SITHLSLQRNNITDNGGMVLFQA 328



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 5/174 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A  ++ +S   FG    F + E L  N+    +  +   I       F   L +N  L+ 
Sbjct: 367 ALKNLRVSSNGFGSSSKFIM-EGLVENKGLNSLHMSFCEIRDTDGAPFGTALSANSTLQH 425

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N + D G  C+ + +  NAG+  L L+   + DEG KAIA  L++N+ LR L L 
Sbjct: 426 LDLSNNKLRDAGTICIAEAMKTNAGLVTLNLACNKITDEGGKAIAMFLRSNNTLRDLNLR 485

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGN---YGGALG-ANALAKGLEGNKSL 332
            N + +S    L E L  N+T+  + +  N   Y   +G    LA+  E NKSL
Sbjct: 486 RNCMSHSTGELLDEQLRSNTTLEKMDVTYNDFPYKCLIGNRTTLARNAEKNKSL 539


>gi|421898414|ref|ZP_16328780.1| lrr-gala family type III effector protein (gala 2) [Ralstonia
            solanacearum MolK2]
 gi|206589620|emb|CAQ36581.1| lrr-gala family type III effector protein (gala 2) [Ralstonia
            solanacearum MolK2]
          Length = 1051

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 212/441 (48%), Gaps = 66/441 (14%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            LSG TG    E+   L   A+      S+D+SG   GD  +  LA S         ++ +
Sbjct: 654  LSGCTGSAVSEAG--LAVLAR--LPLESLDLSGTRIGDREVQALASSTSLT----SLNLS 705

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N I  AG +A    L  N  L  LN+S NPIGD GV+ L D    +  +  L+L  + +
Sbjct: 706  GNRIGNAGARA----LGRNTVLTALNVSANPIGDAGVQALAD----SQSLTSLELRGIGI 757

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
             + G  A+A    +N++LR L++++N +       LA     N T+ SL  N     A G
Sbjct: 758  GEAGIAALA----SNTVLRSLDISSNDLSEQSAAELAR----NQTLASLKAN-----ACG 804

Query: 319  -ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
              N +A+ L   +SLR L +  NSIGD G+ A+     +R   L  L++ +N I+ +G  
Sbjct: 805  LTNGMAQQLARIRSLRTLEVGSNSIGDTGVLAI-----ARNASLRTLNLSHNPITLQGL- 858

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
                 ++  ++L  +++     GD GA      L +NR +T++ LG N I S GA  +A 
Sbjct: 859  ---RPLELSRTLTSLDVSGIGCGDRGALL----LSKNRALTSLKLGFNGIGSAGAQGLAA 911

Query: 438  VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
                N  + SLDL  N I  D AKAL+      G + +L +  C++    A  +A+ L  
Sbjct: 912  ----NRTLISLDLRGNTIDVDAAKALANT----GCLTSLNVSDCKLDDEAASALAESL-- 961

Query: 498  NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
              T++ LD+  N L  + A+ LA      N  LTS++++ N I  DGA A+A      E 
Sbjct: 962  --TLTSLDVSVNRLSGQAARALAG-----NATLTSLNISHNHIGPDGAQALA------ES 1008

Query: 558  VAVTSLNLANNFLTKFGQSAL 578
             ++T L+   N + + G  AL
Sbjct: 1009 PSLTFLDARANGIGEAGARAL 1029



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 126/296 (42%), Gaps = 79/296 (26%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSGNPIGDEGV 235
           EG F L +      T   +  +A      G K+F+ +   + + L++LN++G  IGD+G 
Sbjct: 114 EGNFTLQDLKALPATLRHLDLSA---CTGGAKSFEAIAYLAGLPLESLNVAGADIGDDG- 169

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
                                          A LL  N  LR L    N  +     + A
Sbjct: 170 -------------------------------ARLLAANPSLRAL----NAANGGIGAAGA 194

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
            AL E+  + SL L  N  G  GA ALA    G++SL  L +    + D G RAL     
Sbjct: 195 RALAESPVLASLDLTRNGIGDEGARALA----GSRSLTSLAVLNCLVTDVGARALAG--- 247

Query: 356 SRKGKLAVLDIGN------------------NSISAKGAFHVAEYIKNCKSLLWINLYMN 397
              G L  LD+GN                  N I+A+GA+ +A+     +SL  +++  N
Sbjct: 248 --NGTLTALDLGNLITETGNELEQAGYDRTANEITARGAWALAQN----RSLTSLSIQGN 301

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             GD G +    AL +NRT+T++++   ++    A+ +AR    N V+TSL + +N
Sbjct: 302 LCGDGGVQ----ALARNRTLTSLNVAYTDMTPASATELAR----NPVLTSLSVRWN 349



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 120/269 (44%), Gaps = 50/269 (18%)

Query: 330 KSLRELHLHGN--SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
           ++L ELH + N  S+  EG   L   L +    L  LD+   +  AK +F    Y+    
Sbjct: 97  RALGELHHYPNLTSLQLEGNFTLQD-LKALPATLRHLDLSACTGGAK-SFEAIAYLAGLP 154

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            L  +N+   DIGD+GA  +A     N ++  +    N  +    +A AR L ++ V+ S
Sbjct: 155 -LESLNVAGADIGDDGARLLA----ANPSLRAL----NAANGGIGAAGARALAESPVLAS 205

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL- 506
           LDL  N IG +GA+AL+       ++ +L +  C +   GA  +A     N T++ LDL 
Sbjct: 206 LDLTRNGIGDEGARALAGSR----SLTSLAVLNCLVTDVGARALAG----NGTLTALDLG 257

Query: 507 -----------------RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
                             AN +   GA  LAQ     N +LTS+ +  N   D G  A+A
Sbjct: 258 NLITETGNELEQAGYDRTANEITARGAWALAQ-----NRSLTSLSIQGNLCGDGGVQALA 312

Query: 550 QALKANEDVAVTSLNLANNFLTKFGQSAL 578
           +      +  +TSLN+A   +T    + L
Sbjct: 313 R------NRTLTSLNVAYTDMTPASATEL 335



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 61/291 (20%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S++++G + GD+G   LA        A     A N        A    L  +  L +L
Sbjct: 155 LESLNVAGADIGDDGARLLA--------ANPSLRALNAANGGIGAAGARALAESPVLASL 206

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+ N IGDEG + L      +  +  L + +  + D GA+A+A     N  L  L+L N
Sbjct: 207 DLTRNGIGDEGARALAG----SRSLTSLAVLNCLVTDVGARALA----GNGTLTALDLGN 258

Query: 284 ------NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
                 N ++ +G+   A  +                 A GA ALA+    N+SL  L +
Sbjct: 259 LITETGNELEQAGYDRTANEIT----------------ARGAWALAQ----NRSLTSLSI 298

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYM 396
            GN  GD G++AL     +R   L  L++    ++   A  +A   +    S+ W     
Sbjct: 299 QGNLCGDGGVQAL-----ARNRTLTSLNVAYTDMTPASATELARNPVLTSLSVRW----N 349

Query: 397 NDIGDEGAEKIADALKQNRTITTID-----LGGNNIHSKGASAIARVLKDN 442
             +GD G  ++A    ++ ++T +D     +G     +  A+A  RVL D+
Sbjct: 350 YGLGDAGVVELA----KSPSLTLLDARSTGMGERATLALSANARIRVLHDS 396


>gi|294718617|gb|ADF32021.1| leucine rich repeat containing protein 2 [Azumapecten farreri]
          Length = 425

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 151/300 (50%), Gaps = 7/300 (2%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+   + D   + LC  L +N  V  L L   DL + GAK IA+LL+    L+ L L  N
Sbjct: 56  LTEKRLVDSDAEALCKTLSNNTYVHGLDLRYNDLTNVGAKHIAKLLEETVTLKYLNLMCN 115

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I+  G  ++A+AL +N ++R L LNGN  G  G    A+ L+ NK L  L L    +  
Sbjct: 116 EIESEGAEAIAKALHKNESLRVLRLNGNKIGNRGGMCFAQMLQINKVLEALDLGDTDMTI 175

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           E + AL + L  R   L  L++      S   +   H A+ +K   SL  ++L   D+ D
Sbjct: 176 EAVIALPTVL-HRNSTLKALNVNRPLLFSCQEETTVHFAKMLKTNTSLEELHLQKYDMRD 234

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA ++A+ L  N + T +DL  N I   G   +A+VLK+N+ I  LDL +N +  DGA 
Sbjct: 235 FGATRLAENLMDNMSFTYLDLSCNRITRDGTKELAKVLKNNTSIKILDLGFNRLEDDGAM 294

Query: 462 ALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
            L+E L  ++  + TL +    IG  G    AD ++ N T++ + +  N L  E   C+A
Sbjct: 295 HLAEALATYNTTLETLVVASNNIGNKGLCASADAMKTNTTLTSIFIWGNML--EEPACIA 352



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 153/328 (46%), Gaps = 35/328 (10%)

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
           AG  +L L+   L D  A+A+ + L NN+ +  L+L  N +   G   +A+ L E  T++
Sbjct: 50  AGNNKL-LTEKRLVDSDAEALCKTLSNNTYVHGLDLRYNDLTNVGAKHIAKLLEETVTLK 108

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L+L  N   + GA A+AK L  N+SLR L L+GN IG+ G       L   K  L  LD
Sbjct: 109 YLNLMCNEIESEGAEAIAKALHKNESLRVLRLNGNKIGNRGGMCFAQMLQINK-VLEALD 167

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINL---YMNDIGDEGAEKIADALKQNRTITTIDL 422
           +G+  ++ +    +   +    +L  +N+    +    +E     A  LK N ++  + L
Sbjct: 168 LGDTDMTIEAVIALPTVLHRNSTLKALNVNRPLLFSCQEETTVHFAKMLKTNTSLEELHL 227

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
              ++   GA+ +A  L DN   T LDL+ N I  DG K L++VLK              
Sbjct: 228 QKYDMRDFGATRLAENLMDNMSFTYLDLSCNRITRDGTKELAKVLK-------------- 273

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
                          N +I ILDL  N L D+GA  LA++    N  L ++ +A N I +
Sbjct: 274 --------------NNTSIKILDLGFNRLEDDGAMHLAEALATYNTTLETLVVASNNIGN 319

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFL 570
            G  A A A+K N    +TS+ +  N L
Sbjct: 320 KGLCASADAMKTN--TTLTSIFIWGNML 345



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 147/314 (46%), Gaps = 8/314 (2%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           FT    +E +  + EF + +  + + +   ++ +   D     L ++L  N     +   
Sbjct: 26  FTLMFDKEKEDAVFEFKESMDLYLAGNNKLLTEKRLVDSDAEALCKTLSNNTYVHGLDLR 85

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +T  G K    +L+  + LK LNL  N I  EG + +   L  N  +  L+L+   +
Sbjct: 86  YNDLTNVGAKHIAKLLEETVTLKYLNLMCNEIESEGAEAIAKALHKNESLRVLRLNGNKI 145

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            + G    A++L+ N +L  L+L +  +      +L   L  NST+++L++N     +  
Sbjct: 146 GNRGGMCFAQMLQINKVLEALDLGDTDMTIEAVIALPTVLHRNSTLKALNVNRPLLFSCQ 205

Query: 319 ANA---LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
                  AK L+ N SL ELHL    + D G   L   L         LD+  N I+  G
Sbjct: 206 EETTVHFAKMLKTNTSLEELHLQKYDMRDFGATRLAENLMDNMS-FTYLDLSCNRITRDG 264

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASA 434
              +A+ +KN  S+  ++L  N + D+GA  +A+AL   N T+ T+ +  NNI +KG  A
Sbjct: 265 TKELAKVLKNNTSIKILDLGFNRLEDDGAMHLAEALATYNTTLETLVVASNNIGNKGLCA 324

Query: 435 IARVLKDNSVITSL 448
            A  +K N+ +TS+
Sbjct: 325 SADAMKTNTTLTSI 338



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 118/223 (52%), Gaps = 10/223 (4%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N ++  GA H+A+ ++   +L ++NL  N+I  EGAE IA AL +N ++  + L 
Sbjct: 82  LDLRYNDLTNVGAKHIAKLLEETVTLKYLNLMCNEIESEGAEAIAKALHKNESLRVLRLN 141

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-----NINTLKL 478
           GN I ++G    A++L+ N V+ +LDL    +  +   AL  VL  +      N+N   L
Sbjct: 142 GNKIGNRGGMCFAQMLQINKVLEALDLGDTDMTIEAVIALPTVLHRNSTLKALNVNRPLL 201

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
             CQ   +   F A ML+ N ++  L L+   +RD GA  LA++  + N + T +DL+ N
Sbjct: 202 FSCQ-EETTVHF-AKMLKTNTSLEELHLQKYDMRDFGATRLAENL-MDNMSFTYLDLSCN 258

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            I  DG   +A+ LK N  + +  L+L  N L   G   L +A
Sbjct: 259 RITRDGTKELAKVLKNNTSIKI--LDLGFNRLEDDGAMHLAEA 299



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 128/306 (41%), Gaps = 63/306 (20%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+   +  + G   +A+ L    T + ++   N I + G +A    L  N +L+ L L+
Sbjct: 82  LDLRYNDLTNVGAKHIAKLLEETVTLKYLNLMCNEIESEGAEAIAKALHKNESLRVLRLN 141

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN--- 283
           GN IG+ G  C   +L  N  +E L L   D+  E   A+  +L  NS L+ L +N    
Sbjct: 142 GNKIGNRGGMCFAQMLQINKVLEALDLGDTDMTIEAVIALPTVLHRNSTLKALNVNRPLL 201

Query: 284 -----------------------------NMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
                                        +M D+ G T LAE L++N +   L L+ N  
Sbjct: 202 FSCQEETTVHFAKMLKTNTSLEELHLQKYDMRDF-GATRLAENLMDNMSFTYLDLSCNRI 260

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
              G   LAK L+ N S++                             +LD+G N +   
Sbjct: 261 TRDGTKELAKVLKNNTSIK-----------------------------ILDLGFNRLEDD 291

Query: 375 GAFHVAEYIKNCKSLL-WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           GA H+AE +    + L  + +  N+IG++G    ADA+K N T+T+I + GN +      
Sbjct: 292 GAMHLAEALATYNTTLETLVVASNNIGNKGLCASADAMKTNTTLTSIFIWGNMLEEPACI 351

Query: 434 AIARVL 439
           A A +L
Sbjct: 352 AFASLL 357



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 34/231 (14%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G   G+ G    A+ L  N+  E +      +T   + A   VL  N  LK LN++  
Sbjct: 140 LNGNKIGNRGGMCFAQMLQINKVLEALDLGDTDMTIEAVIALPTVLHRNSTLKALNVN-R 198

Query: 229 PI----GDEGVKCLCDILVDNAGVERLQLSSVDLRD------------------------ 260
           P+     +E       +L  N  +E L L   D+RD                        
Sbjct: 199 PLLFSCQEETTVHFAKMLKTNTSLEELHLQKYDMRDFGATRLAENLMDNMSFTYLDLSCN 258

Query: 261 ----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGG 315
               +G K +A++LKNN+ +++L+L  N ++  G   LAEAL   N+T+ +L +  N  G
Sbjct: 259 RITRDGTKELAKVLKNNTSIKILDLGFNRLEDDGAMHLAEALATYNTTLETLVVASNNIG 318

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
             G  A A  ++ N +L  + + GN + +    A  S L S + K    DI
Sbjct: 319 NKGLCASADAMKTNTTLTSIFIWGNMLEEPACIAFASLLDSGRLKPENTDI 369


>gi|300704275|ref|YP_003745878.1| leucine-rich-repeat type III effector protein (gala6) [Ralstonia
           solanacearum CFBP2957]
 gi|299071939|emb|CBJ43268.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
           solanacearum CFBP2957]
          Length = 519

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 137/436 (31%), Positives = 212/436 (48%), Gaps = 76/436 (17%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + +S+ ++G + GD     LA+S    ++   +  + N I   G +A      ++  L +
Sbjct: 106 SLTSLSLTGCSIGDRAATALAQS----RSIASLDLSVNMIGPDGARAL-----ASAPLVS 156

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL  N IGDEG   L      +  ++ L  S+  + D G    A+    N++L  L L 
Sbjct: 157 LNLHNNGIGDEGALALAT----SGTLKSLNASNNGIGDAGVLGFAD----NTVLTQLNLA 208

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            NMI  +G    A AL  N+++  L L+ N  G  GA ALA    G++SL  L++  N I
Sbjct: 209 GNMIGPAG----ARALRRNTSLTELDLSTNRLGDAGAQALA----GSRSLTSLNVRSNEI 260

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV--------------------AEY 382
           GD+G  AL     +R   L  L++  N I   GA  +                    A  
Sbjct: 261 GDDGTEAL-----ARNTTLKSLNLSYNPIGFWGAGALGGSTTLRELDLRCCAIDPYGASA 315

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +    SL  ++L  N IGD+GA     AL  +RT+T +DL  NNIH  GA A+A     N
Sbjct: 316 LARNTSLASLHLGSNRIGDDGAR----ALATSRTLTLLDLSRNNIHDAGAQALA----GN 367

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +TSL+L  N +  DGA AL++    H  + +L LG  +IG +GA+ +A     + T++
Sbjct: 368 GSLTSLNLYGNEVDDDGAAALAQ----HPRLTSLNLGRNRIGPNGAQHLA----KSATLT 419

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            LDL  N L  EGA+ L+ S       LT+++++ N I + GA A A+     +  ++TS
Sbjct: 420 ELDLSENRLGPEGAEALSLS-----TVLTTLNVSDNAIGEAGARAFAE-----KSTSLTS 469

Query: 563 LNLANNFLTKFGQSAL 578
           L+  NN + + G + L
Sbjct: 470 LDARNNRMGEAGANLL 485



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 160/366 (43%), Gaps = 88/366 (24%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+++     GDEG   LA S     T + ++ + NGI  AG+  F      N  L  LNL
Sbjct: 156 SLNLHNNGIGDEGALALATS----GTLKSLNASNNGIGDAGVLGF----ADNTVLTQLNL 207

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA------------------ 267
           +GN IG  G + L      N  +  L LS+  L D GA+A+A                  
Sbjct: 208 AGNMIGPAGARAL----RRNTSLTELDLSTNRLGDAGAQALAGSRSLTSLNVRSNEIGDD 263

Query: 268 --ELLKNNSILRVLELNNNMIDYSGFTSL--------------------AEALLENSTIR 305
             E L  N+ L+ L L+ N I + G  +L                    A AL  N+++ 
Sbjct: 264 GTEALARNTTLKSLNLSYNPIGFWGAGALGGSTTLRELDLRCCAIDPYGASALARNTSLA 323

Query: 306 SLHLNGNYGGALGANALA--------------------KGLEGNKSLRELHLHGNSIGDE 345
           SLHL  N  G  GA ALA                    + L GN SL  L+L+GN + D+
Sbjct: 324 SLHLGSNRIGDDGARALATSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDD 383

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL     ++  +L  L++G N I   GA H+A+      +L  ++L  N +G EGAE
Sbjct: 384 GAAAL-----AQHPRLTSLNLGRNRIGPNGAQHLAK----SATLTELDLSENRLGPEGAE 434

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
               AL  +  +TT+++  N I   GA A A   + ++ +TSLD   N +G  GA  L  
Sbjct: 435 ----ALSLSTVLTTLNVSDNAIGEAGARAFA---EKSTSLTSLDARNNRMGEAGANLLEA 487

Query: 466 VLKFHG 471
             +  G
Sbjct: 488 NTRLTG 493



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 149/368 (40%), Gaps = 124/368 (33%)

Query: 330 KSLRELHLHGNSIGDEGIRAL----------MSGLS---------SRKGKLAVLDIGNNS 370
           + L+ L L+G  I  EG R L          ++G S         ++   +A LD+  N 
Sbjct: 81  RPLKSLSLNGIEIDAEGARLLATCASLTSLSLTGCSIGDRAATALAQSRSIASLDLSVNM 140

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD--------------------- 409
           I   GA  +A        L+ +NL+ N IGDEGA  +A                      
Sbjct: 141 IGPDGARALAS-----APLVSLNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLG 195

Query: 410 -----------------------ALKQNRTITTIDLGGNNIHSKGASAIA---------- 436
                                  AL++N ++T +DL  N +   GA A+A          
Sbjct: 196 FADNTVLTQLNLAGNMIGPAGARALRRNTSLTELDLSTNRLGDAGAQALAGSRSLTSLNV 255

Query: 437 ----------RVLKDNSVITSLDLAYNPIGADGAKAL--------------------SEV 466
                       L  N+ + SL+L+YNPIG  GA AL                    +  
Sbjct: 256 RSNEIGDDGTEALARNTTLKSLNLSYNPIGFWGAGALGGSTTLRELDLRCCAIDPYGASA 315

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
           L  + ++ +L LG  +IG  GA  +A     + T+++LDL  N + D GA+ LA      
Sbjct: 316 LARNTSLASLHLGSNRIGDDGARALA----TSRTLTLLDLSRNNIHDAGAQALAG----- 366

Query: 527 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV- 585
           N +LTS++L  NE+ DDGA A+AQ  +      +TSLNL  N +   G   L  +  L  
Sbjct: 367 NGSLTSLNLYGNEVDDDGAAALAQHPR------LTSLNLGRNRIGPNGAQHLAKSATLTE 420

Query: 586 YEMSEKEV 593
            ++SE  +
Sbjct: 421 LDLSENRL 428


>gi|292626195|ref|XP_695332.4| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 [Danio
            rerio]
          Length = 1314

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 198/415 (47%), Gaps = 15/415 (3%)

Query: 175  GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
             DE L  L+  +   QT +        +T     A   VL+S+  LK LN+S N + D G
Sbjct: 777  SDECLIRLSAVI---QTCKRALLNDCNLTEKSCSALTSVLRSDTNLKVLNMSNNNLQDSG 833

Query: 235  VKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKN--NSILRVLELNNNMIDYSGF 291
            ++ LC  + D    +E L+LS  DL +E   A+A +L +  NS L+ L+L+NN +  SG 
Sbjct: 834  LRLLCSGMKDIKCELEVLRLSKCDLTEESCSALASVLSSGFNS-LKDLDLSNNNLQNSGV 892

Query: 292  TSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRA 349
              L++ L + N T+  L L+       G  ALA  L  N S L EL L GN  G  G++ 
Sbjct: 893  KLLSDGLKDSNCTLEKLGLSDCNISEEGYKALASALRSNPSHLIELDLRGNDPGQSGVKE 952

Query: 350  LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN-CKSLLWINLYMNDIGDEGAEKIA 408
            L   L     KL  L + N ++  +    +A  +++   SL  ++L  N++ D G ++++
Sbjct: 953  LAELLQDPHCKLKTLRLRNCALREESCSALASVLRSESSSLKDLDLSNNNLQDSGVKRLS 1012

Query: 409  DALKQNRTITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYNPIGADGAKALSEVL 467
            D LK ++ +  + L   +I  +G  A+   L+ N S +  L+L  N  G  G K L+ +L
Sbjct: 1013 DGLKDSK-LEKLSLSDCSISEEGCKALTSALRSNPSHLIELNLGGNDPGQSGVKELTNLL 1071

Query: 468  K-FHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDEGAKCLAQSFKV 525
            +  H  + TL+L  C++       V   L+ N + +  L+L  N L D G K L+     
Sbjct: 1072 QDPHCTLKTLRLSSCEMTDEACSAVTSALKSNPSHLRELNLSYNKLGDSGVKNLSYLLMK 1131

Query: 526  VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
                L  + L    I ++    +  ALK+N    +  LNL+ N L   G   L+D
Sbjct: 1132 PQFKLEKLHLCNCSITEEQCVILTSALKSNPS-HLRELNLSCNELADSGVKNLSD 1185



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 202/426 (47%), Gaps = 14/426 (3%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEV-SFAANGITAAGIKAFDGVLQSNI-ALKTLN 224
            ++MS  N  D GL  L   +   +   EV   +   +T     A   VL S   +LK L+
Sbjct: 822  LNMSNNNLQDSGLRLLCSGMKDIKCELEVLRLSKCDLTEESCSALASVLSSGFNSLKDLD 881

Query: 225  LSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELN 282
            LS N + + GVK L D L D N  +E+L LS  ++ +EG KA+A  L++N S L  L+L 
Sbjct: 882  LSNNNLQNSGVKLLSDGLKDSNCTLEKLGLSDCNISEEGYKALASALRSNPSHLIELDLR 941

Query: 283  NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEG-NKSLRELHLHGN 340
             N    SG   LAE L + +  +++L L          +ALA  L   + SL++L L  N
Sbjct: 942  GNDPGQSGVKELAELLQDPHCKLKTLRLRNCALREESCSALASVLRSESSSLKDLDLSNN 1001

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDI 399
            ++ D G++ L  GL  +  KL  L + + SIS +G   +   ++ N   L+ +NL  ND 
Sbjct: 1002 NLQDSGVKRLSDGL--KDSKLEKLSLSDCSISEEGCKALTSALRSNPSHLIELNLGGNDP 1059

Query: 400  GDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYNPIGA 457
            G  G +++ + L+  + T+ T+ L    +  +  SA+   LK N S +  L+L+YN +G 
Sbjct: 1060 GQSGVKELTNLLQDPHCTLKTLRLSSCEMTDEACSAVTSALKSNPSHLRELNLSYNKLGD 1119

Query: 458  DGAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDEG 515
             G K LS +L K    +  L L  C I       +   L+ N + +  L+L  N L D G
Sbjct: 1120 SGVKNLSYLLMKPQFKLEKLHLCNCSITEEQCVILTSALKSNPSHLRELNLSCNELADSG 1179

Query: 516  AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
             K L+         L  + L    I +     +  ALK+N    +  LNL+ N +   G 
Sbjct: 1180 VKNLSDLLMKPQFRLEKLHLYKCSITEKQCKILTSALKSNPS-HLRELNLSENQIRNTGV 1238

Query: 576  SALTDA 581
            + L D 
Sbjct: 1239 NLLCDV 1244



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 160/324 (49%), Gaps = 23/324 (7%)

Query: 151  KQTLNEFAKELRAFSS----VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
            +++ +  A  LR+ SS    +D+S  N  D G+  L++ L  +   E++S +   I+  G
Sbjct: 976  EESCSALASVLRSESSSLKDLDLSNNNLQDSGVKRLSDGLK-DSKLEKLSLSDCSISEEG 1034

Query: 207  IKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
             KA    L+SN + L  LNL GN  G  GVK L ++L D +  ++ L+LSS ++ DE   
Sbjct: 1035 CKALTSALRSNPSHLIELNLGGNDPGQSGVKELTNLLQDPHCTLKTLRLSSCEMTDEACS 1094

Query: 265  AIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENS-TIRSLHLNGNYGGALGANAL 322
            A+   LK+N S LR L L+ N +  SG  +L+  L++    +  LHL            L
Sbjct: 1095 AVTSALKSNPSHLRELNLSYNKLGDSGVKNLSYLLMKPQFKLEKLHLCNCSITEEQCVIL 1154

Query: 323  AKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
               L+ N S LREL+L  N + D G++ L   L   + +L  L +   SI+ K    +  
Sbjct: 1155 TSALKSNPSHLRELNLSCNELADSGVKNLSDLLMKPQFRLEKLHLYKCSITEKQCKILTS 1214

Query: 382  YIK-NCKSLLWINLYMNDIGDEGAEKIADALKQN----RTITTIDLGGNNIHSKGASAIA 436
             +K N   L  +NL  N I + G   + D LK +    +T+  +  G +++     S++ 
Sbjct: 1215 ALKSNPSHLRELNLSENQIRNTGVNLLCDVLKDSHCKLKTLRLLCCGISDV-----SSLT 1269

Query: 437  RVLKDNSVITSL---DLAYNPIGA 457
            + LK+   +  L   +L+YN I A
Sbjct: 1270 QCLKNTKALQFLKEVNLSYNSIEA 1293


>gi|320165044|gb|EFW41943.1| NOD3 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 214

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 116/193 (60%), Gaps = 1/193 (0%)

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           +N I   GA  +AE +K   +L  I L+ N IGD GA  ++ ALK N+T+  IDL GN I
Sbjct: 6   DNQIGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQI 65

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
              GA AIA  LK N+ + +L L  N +G  GA A++E+LK +  + +L L   QIG +G
Sbjct: 66  GDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAG 125

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
           A  +A+ L+ N T++ L+L  N + D GA+ +A++ K VN  L  + L  NEI + GA A
Sbjct: 126 ALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEALK-VNTTLPCLVLNENEIGNAGAQA 184

Query: 548 IAQALKANEDVAV 560
           IA+ALK N  + V
Sbjct: 185 IAEALKVNTTLIV 197



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 109/189 (57%), Gaps = 1/189 (0%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           LH N IG++G RA+   L      L  + +  N I   GA  ++  +K  K+L+ I+L  
Sbjct: 4   LHDNQIGEDGARAIAETLKVNT-TLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNG 62

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IGD GA+ IA+ LK N T+  + L  N +   GA+AIA +LK N ++TSL L  N IG
Sbjct: 63  NQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIG 122

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             GA A++E LK +  +  L L   QIG +GA+ +A+ L+ N T+  L L  N + + GA
Sbjct: 123 NAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLNENEIGNAGA 182

Query: 517 KCLAQSFKV 525
           + +A++ KV
Sbjct: 183 QAIAEALKV 191



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 114/224 (50%), Gaps = 29/224 (12%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N IG++                            GA+AIAE LK N+ L  ++L  N
Sbjct: 4   LHDNQIGED----------------------------GARAIAETLKVNTTLTKIKLWKN 35

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  +L+ AL  N T+  + LNGN  G  GA A+A+ L+ N +L  L LH N +GD
Sbjct: 36  QIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLANLGLHNNKLGD 95

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G  A+   L   K  L  L + NN I   GA  +AE +K  K+L W+NL  N IGD GA
Sbjct: 96  AGATAIAEMLKVNK-MLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGA 154

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           + IA+ALK N T+  + L  N I + GA AIA  LK N+ +  L
Sbjct: 155 QAIAEALKVNTTLPCLVLNENEIGNAGAQAIAEALKVNTTLIVL 198



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 116/201 (57%), Gaps = 3/201 (1%)

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           + SLH   N  G  GA A+A+ L+ N +L ++ L  N IGD G  AL + L   K  L  
Sbjct: 1   MHSLH--DNQIGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNK-TLIK 57

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +D+  N I   GA  +AE +K   +L  + L+ N +GD GA  IA+ LK N+ +T++ L 
Sbjct: 58  IDLNGNQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLD 117

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I + GA AIA  LK N  +T L+L+ N IG  GA+A++E LK +  +  L L   +I
Sbjct: 118 NNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLNENEI 177

Query: 484 GASGAEFVADMLRYNNTISIL 504
           G +GA+ +A+ L+ N T+ +L
Sbjct: 178 GNAGAQAIAEALKVNTTLIVL 198



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/190 (40%), Positives = 111/190 (58%), Gaps = 1/190 (0%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L++N I   G  ++AE L  N+T+  + L  N  G  GA+AL+  L+ NK+L ++ L+GN
Sbjct: 4   LHDNQIGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGN 63

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD G +A+   L      LA L + NN +   GA  +AE +K  K L  ++L  N IG
Sbjct: 64  QIGDAGAQAIAETLKVNT-TLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIG 122

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           + GA  IA+ALK N+T+T ++L  N I   GA AIA  LK N+ +  L L  N IG  GA
Sbjct: 123 NAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLNENEIGNAGA 182

Query: 461 KALSEVLKFH 470
           +A++E LK +
Sbjct: 183 QAIAEALKVN 192



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 110/188 (58%), Gaps = 3/188 (1%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L+ N IG++GA  IA+ LK N T+T I L  N I   GA A++  LK N  +  +DL  N
Sbjct: 4   LHDNQIGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGN 63

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A++E LK +  +  L L   ++G +GA  +A+ML+ N  ++ L L  N + +
Sbjct: 64  QIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGN 123

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA  +A++ K VN+ LT ++L+ N+I D GA AIA+ALK N  +    LN   N +   
Sbjct: 124 AGALAIAEALK-VNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLN--ENEIGNA 180

Query: 574 GQSALTDA 581
           G  A+ +A
Sbjct: 181 GAQAIAEA 188



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 101/181 (55%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G++G   +AE+L  N T  ++    N I  AG  A    L+ N  L  ++L+GN IGD 
Sbjct: 9   IGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDA 68

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  +  L L +  L D GA AIAE+LK N +L  L L+NN I  +G  +
Sbjct: 69  GAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALA 128

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +AEAL  N T+  L+L+ N  G  GA A+A+ L+ N +L  L L+ N IG+ G +A+   
Sbjct: 129 IAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLNENEIGNAGAQAIAEA 188

Query: 354 L 354
           L
Sbjct: 189 L 189



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 111/228 (48%), Gaps = 29/228 (12%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S   N I   G +A    L+ N  L  + L  N IGD G   L   L  N  + ++ L+ 
Sbjct: 3   SLHDNQIGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNG 62

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + D GA+AIAE LK N+ L  L L+NN +  +G T++AE L  N  + SL L+ N  G
Sbjct: 63  NQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIG 122

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA A+A+ L+ NK+L  L+L  N IGD G +A                          
Sbjct: 123 NAGALAIAEALKVNKTLTWLNLSENQIGDAGAQA-------------------------- 156

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
              +AE +K   +L  + L  N+IG+ GA+ IA+ALK N T+  +  G
Sbjct: 157 ---IAEALKVNTTLPCLVLNENEIGNAGAQAIAEALKVNTTLIVLLYG 201



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 86/169 (50%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + +     GD G   L+ +L  N+T  ++    N I  AG +A    L+ N  L  L
Sbjct: 27  LTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLANL 86

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N +GD G   + ++L  N  +  L L +  + + GA AIAE LK N  L  L L+ 
Sbjct: 87  GLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSE 146

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N I  +G  ++AEAL  N+T+  L LN N  G  GA A+A+ L+ N +L
Sbjct: 147 NQIGDAGAQAIAEALKVNTTLPCLVLNENEIGNAGAQAIAEALKVNTTL 195



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 63/128 (49%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     +++ +     GD G   +AE L  N+    +S   N I  AG  A  
Sbjct: 71  QAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIA 130

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  LNLS N IGD G + + + L  N  +  L L+  ++ + GA+AIAE LK
Sbjct: 131 EALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLNENEIGNAGAQAIAEALK 190

Query: 272 NNSILRVL 279
            N+ L VL
Sbjct: 191 VNTTLIVL 198


>gi|406942580|gb|EKD74779.1| NLR family, CARD protein [uncultured bacterium]
          Length = 318

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 143/266 (53%), Gaps = 4/266 (1%)

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N  +R+L+L            LA  L GN ++  L+L GN I D G + L   L   +  
Sbjct: 14  NMNVRNLNLANKRLNDADLKDLAAALNGNSTIETLNLTGNRISDAGAKDLAEALKVNR-T 72

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  L + +N +S  GA  +AE  +   +L+ INL  N I D GA+ +A ALK+NRTI T+
Sbjct: 73  LRTLILLDNIVSDAGAKDLAEAFEVNSTLITINLLGNRISDGGAKDLAAALKKNRTIETL 132

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L  N I   GA  +A  LK NS +T+LDL  N I   G K L+E LK +  +  L L  
Sbjct: 133 VLKENKISDLGAKDLAEALKVNSSLTTLDLENNEISDVGVKELAEALKVNRTLKKLNLSS 192

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            ++  +G + +A+ L+ N++++ L+L  N + + G + LAQ+ + VN  L  ++LA+ EI
Sbjct: 193 IRVSDAGVKELAEALKVNSSLTTLELNLNVIGNVGVQALAQALR-VNRMLKVLNLAYAEI 251

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLA 566
            D    A   AL+ N    VT +N++
Sbjct: 252 DDVDVQAFIDALEENH--IVTEINVS 275



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 136/280 (48%), Gaps = 29/280 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     ++ A   +  A +K     L  N  ++TLNL+GN I                  
Sbjct: 14  NMNVRNLNLANKRLNDADLKDLAAALNGNSTIETLNLTGNRIS----------------- 56

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
                      D GAK +AE LK N  LR L L +N++  +G   LAEA   NST+ +++
Sbjct: 57  -----------DAGAKDLAEALKVNRTLRTLILLDNIVSDAGAKDLAEAFEVNSTLITIN 105

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L GN     GA  LA  L+ N+++  L L  N I D G + L   L      L  LD+ N
Sbjct: 106 LLGNRISDGGAKDLAAALKKNRTIETLVLKENKISDLGAKDLAEALKV-NSSLTTLDLEN 164

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N IS  G   +AE +K  ++L  +NL    + D G +++A+ALK N ++TT++L  N I 
Sbjct: 165 NEISDVGVKELAEALKVNRTLKKLNLSSIRVSDAGVKELAEALKVNSSLTTLELNLNVIG 224

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           + G  A+A+ L+ N ++  L+LAY  I     +A  + L+
Sbjct: 225 NVGVQALAQALRVNRMLKVLNLAYAEIDDVDVQAFIDALE 264



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 121/260 (46%), Gaps = 29/260 (11%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             +++++G    D G   LAE+L  N+T   +    N ++ AG K      + N  L T+
Sbjct: 45  IETLNLTGNRISDAGAKDLAEALKVNRTLRTLILLDNIVSDAGAKDLAEAFEVNSTLITI 104

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NL GN I D G K L   L  N  +E L L    + D GAK +AE LK NS L  L+L N
Sbjct: 105 NLLGNRISDGGAKDLAAALKKNRTIETLVLKENKISDLGAKDLAEALKVNSSLTTLDLEN 164

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G   LAEAL  N T++ L+L+       G   LA+ L+ N SL  L L+ N IG
Sbjct: 165 NEISDVGVKELAEALKVNRTLKKLNLSSIRVSDAGVKELAEALKVNSSLTTLELNLNVIG 224

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G++AL                             A+ ++  + L  +NL   +I D  
Sbjct: 225 NVGVQAL-----------------------------AQALRVNRMLKVLNLAYAEIDDVD 255

Query: 404 AEKIADALKQNRTITTIDLG 423
            +   DAL++N  +T I++ 
Sbjct: 256 VQAFIDALEENHIVTEINVS 275



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K+ R   ++ +      D G   LAE+L  N +   +    N I+  G+K     L+ N 
Sbjct: 124 KKNRTIETLVLKENKISDLGAKDLAEALKVNSSLTTLDLENNEISDVGVKELAEALKVNR 183

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            LK LNLS   + D GVK L + L  N+ +  L+L+   + + G +A+A+ L+ N +L+V
Sbjct: 184 TLKKLNLSSIRVSDAGVKELAEALKVNSSLTTLELNLNVIGNVGVQALAQALRVNRMLKV 243

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           L L    ID     +  +AL EN  +  +++
Sbjct: 244 LNLAYAEIDDVDVQAFIDALEENHIVTEINV 274



 Score = 42.4 bits (98), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 48/104 (46%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E  K  R    +++S     D G+  LAE+L  N +   +    N I   G++A  
Sbjct: 173 KELAEALKVNRTLKKLNLSSIRVSDAGVKELAEALKVNSSLTTLELNLNVIGNVGVQALA 232

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
             L+ N  LK LNL+   I D  V+   D L +N  V  + +S+
Sbjct: 233 QALRVNRMLKVLNLAYAEIDDVDVQAFIDALEENHIVTEINVST 276


>gi|326428524|gb|EGD74094.1| hypothetical protein PTSG_05787 [Salpingoeca sp. ATCC 50818]
          Length = 238

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/196 (42%), Positives = 119/196 (60%), Gaps = 2/196 (1%)

Query: 311 GNYG-GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           GN G G +GA A+A+ ++ N  L+EL L  NSIG EG  AL   L      L  LD+  N
Sbjct: 44  GNSGLGDIGARAVAEAVKDNTCLKELDLWDNSIGPEGAVALAEMLKHNTA-LTWLDLEGN 102

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
           SI  +GA  +AE +K+  +L  + L  N IGD+GA  +A+ LK N T+T ++L  N+I  
Sbjct: 103 SIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKHNTTLTGLNLWNNSIGP 162

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           +GA A+A +LK N+ +T LDL YN IG +GA AL+E+LK +  +  L L    IG  GA 
Sbjct: 163 EGAVALAEMLKHNTALTWLDLQYNSIGPEGAVALAEMLKHNTTMTLLGLYNNSIGDEGAV 222

Query: 490 FVADMLRYNNTISILD 505
            +A+ML +N T+  L+
Sbjct: 223 ALAEMLEHNTTLETLE 238



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 115/187 (61%), Gaps = 2/187 (1%)

Query: 339 GNS-IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           GNS +GD G RA+   +      L  LD+ +NSI  +GA  +AE +K+  +L W++L  N
Sbjct: 44  GNSGLGDIGARAVAEAVKDNTC-LKELDLWDNSIGPEGAVALAEMLKHNTALTWLDLEGN 102

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IG++GA  +A+ LK N  +  + L  N+I  KGA A+A +LK N+ +T L+L  N IG 
Sbjct: 103 SIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKHNTTLTGLNLWNNSIGP 162

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           +GA AL+E+LK +  +  L L +  IG  GA  +A+ML++N T+++L L  N + DEGA 
Sbjct: 163 EGAVALAEMLKHNTALTWLDLQYNSIGPEGAVALAEMLKHNTTMTLLGLYNNSIGDEGAV 222

Query: 518 CLAQSFK 524
            LA+  +
Sbjct: 223 ALAEMLE 229



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 6/211 (2%)

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           E IRA+ +     +     +++GN+ +   GA  VAE +K+   L  ++L+ N IG EGA
Sbjct: 27  EEIRAIANNTCGER-----INLGNSGLGDIGARAVAEAVKDNTCLKELDLWDNSIGPEGA 81

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             +A+ LK N  +T +DL GN+I ++GA A+A +LK N+ +  L L  N IG  GA AL+
Sbjct: 82  VALAEMLKHNTALTWLDLEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALA 141

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           E+LK +  +  L L    IG  GA  +A+ML++N  ++ LDL+ N +  EGA  LA+  K
Sbjct: 142 EMLKHNTTLTGLNLWNNSIGPEGAVALAEMLKHNTALTWLDLQYNSIGPEGAVALAEMLK 201

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             N  +T + L  N I D+GA A+A+ L+ N
Sbjct: 202 -HNTTMTLLGLYNNSIGDEGAVALAEMLEHN 231



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 123/216 (56%), Gaps = 1/216 (0%)

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G+K     + +N   + +NL  + +GD G + + + + DN  ++ L L    +  EGA A
Sbjct: 24  GVKEEIRAIANNTCGERINLGNSGLGDIGARAVAEAVKDNTCLKELDLWDNSIGPEGAVA 83

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +AE+LK+N+ L  L+L  N I   G  +LAE L  N+ ++ L+LN N  G  GA ALA+ 
Sbjct: 84  LAEMLKHNTALTWLDLEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEM 143

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N +L  L+L  NSIG EG  AL   L      L  LD+  NSI  +GA  +AE +K+
Sbjct: 144 LKHNTTLTGLNLWNNSIGPEGAVALAEMLKHNTA-LTWLDLQYNSIGPEGAVALAEMLKH 202

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             ++  + LY N IGDEGA  +A+ L+ N T+ T++
Sbjct: 203 NTTMTLLGLYNNSIGDEGAVALAEMLEHNTTLETLE 238



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 113/189 (59%), Gaps = 3/189 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           INL  + +GD GA  +A+A+K N  +  +DL  N+I  +GA A+A +LK N+ +T LDL 
Sbjct: 41  INLGNSGLGDIGARAVAEAVKDNTCLKELDLWDNSIGPEGAVALAEMLKHNTALTWLDLE 100

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA AL+E+LK +  +  L L    IG  GA  +A+ML++N T++ L+L  N +
Sbjct: 101 GNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKHNTTLTGLNLWNNSI 160

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
             EGA  LA+  K  N ALT +DL +N I  +GA A+A+ LK N    +T L L NN + 
Sbjct: 161 GPEGAVALAEMLKH-NTALTWLDLQYNSIGPEGAVALAEMLKHN--TTMTLLGLYNNSIG 217

Query: 572 KFGQSALTD 580
             G  AL +
Sbjct: 218 DEGAVALAE 226



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 6/198 (3%)

Query: 159 KELRAFSS------VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           +E+RA ++      +++     GD G   +AE++  N   +E+    N I   G  A   
Sbjct: 27  EEIRAIANNTCGERINLGNSGLGDIGARAVAEAVKDNTCLKELDLWDNSIGPEGAVALAE 86

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L+ N AL  L+L GN IG++G   L ++L  N  ++ L L++  + D+GA A+AE+LK+
Sbjct: 87  MLKHNTALTWLDLEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKH 146

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L L NN I   G  +LAE L  N+ +  L L  N  G  GA ALA+ L+ N ++
Sbjct: 147 NTTLTGLNLWNNSIGPEGAVALAEMLKHNTALTWLDLQYNSIGPEGAVALAEMLKHNTTM 206

Query: 333 RELHLHGNSIGDEGIRAL 350
             L L+ NSIGDEG  AL
Sbjct: 207 TLLGLYNNSIGDEGAVAL 224



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 3/179 (1%)

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +G ++   A+  N     I+LG + +   GA A+A  +KDN+ +  LDL  N IG +GA 
Sbjct: 23  DGVKEEIRAIANNTCGERINLGNSGLGDIGARAVAEAVKDNTCLKELDLWDNSIGPEGAV 82

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           AL+E+LK +  +  L L    IG  GA  +A+ML++N  +  L L  N + D+GA  LA+
Sbjct: 83  ALAEMLKHNTALTWLDLEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAE 142

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
             K  N  LT ++L  N I  +GA A+A+ LK N   A+T L+L  N +   G  AL +
Sbjct: 143 MLK-HNTTLTGLNLWNNSIGPEGAVALAEMLKHN--TALTWLDLQYNSIGPEGAVALAE 198



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 92/180 (51%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  K+      +D+   + G EG   LAE L +N     +    N I   G  A   +L+
Sbjct: 58  EAVKDNTCLKELDLWDNSIGPEGAVALAEMLKHNTALTWLDLEGNSIGNQGAVALAEMLK 117

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N ALK L L+ N IGD+G   L ++L  N  +  L L +  +  EGA A+AE+LK+N+ 
Sbjct: 118 HNTALKELYLNNNSIGDKGAVALAEMLKHNTTLTGLNLWNNSIGPEGAVALAEMLKHNTA 177

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L+L  N I   G  +LAE L  N+T+  L L  N  G  GA ALA+ LE N +L  L
Sbjct: 178 LTWLDLQYNSIGPEGAVALAEMLKHNTTMTLLGLYNNSIGDEGAVALAEMLEHNTTLETL 237



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 82/159 (51%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E    L E  K   A + +D+ G + G++G   LAE L +N   +E+    N I   G  
Sbjct: 79  EGAVALAEMLKHNTALTWLDLEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAV 138

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   +L+ N  L  LNL  N IG EG   L ++L  N  +  L L    +  EGA A+AE
Sbjct: 139 ALAEMLKHNTTLTGLNLWNNSIGPEGAVALAEMLKHNTALTWLDLQYNSIGPEGAVALAE 198

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           +LK+N+ + +L L NN I   G  +LAE L  N+T+ +L
Sbjct: 199 MLKHNTTMTLLGLYNNSIGDEGAVALAEMLEHNTTLETL 237



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 66/127 (51%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K   A   + ++  + GD+G   LAE L +N T   ++   N I   G  A   +
Sbjct: 112 LAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKHNTTLTGLNLWNNSIGPEGAVALAEM 171

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N AL  L+L  N IG EG   L ++L  N  +  L L +  + DEGA A+AE+L++N
Sbjct: 172 LKHNTALTWLDLQYNSIGPEGAVALAEMLKHNTTMTLLGLYNNSIGDEGAVALAEMLEHN 231

Query: 274 SILRVLE 280
           + L  LE
Sbjct: 232 TTLETLE 238


>gi|320170904|gb|EFW47803.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 469

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/298 (37%), Positives = 161/298 (54%), Gaps = 6/298 (2%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N +D  G  +LA AL  N T+  L LNGN  G  GA A A+ L+ N +L EL LH N
Sbjct: 7   LGTNQMDDGGVRALAFALNMNHTLTGLSLNGNQIGDAGAEAAAEALKMNTTLTELSLHCN 66

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            I   G  A+   L   K  L VL++  N +   GA  +AE +K    L  + L  N IG
Sbjct: 67  QIRHAGASAIAEALKVNK-SLKVLNLEMNQLFDDGAEAIAEALKVNTGLTKLCLGKNMIG 125

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           + GA+KIA+ALK + T+  +DL   N  +  A AIA  LK N+ +  L+L  N IG  GA
Sbjct: 126 NAGAQKIAEALKVS-TLLILDLQ-QNQIAARAQAIAEALKVNTKLKELNLHQNQIGVVGA 183

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
           +A++E LK +  + +L L   QIG +G + +A+ L+ N  +++L L  N + D GA+ +A
Sbjct: 184 QAIAEALKANTTLTSLFLARNQIGDAGTQAIAEALKVNTRLTVLHLNENEIGDAGAQAIA 243

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           ++   VN  L  + L+ N+I D GA AIA   K N  +    + L  N++ K    A+
Sbjct: 244 EAL-TVNTKLGDLFLSANQIGDAGAQAIADTFKLNPRLEY--ITLTKNYIDKVCAHAI 298



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 111/296 (37%), Positives = 156/296 (52%), Gaps = 4/296 (1%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L +  + D G +A+A  L  N  L  L LN N I  +G  + AEAL  N+T+  L L+ N
Sbjct: 7   LGTNQMDDGGVRALAFALNMNHTLTGLSLNGNQIGDAGAEAAAEALKMNTTLTELSLHCN 66

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                GA+A+A+ L+ NKSL+ L+L  N + D+G  A+   L    G L  L +G N I 
Sbjct: 67  QIRHAGASAIAEALKVNKSLKVLNLEMNQLFDDGAEAIAEALKVNTG-LTKLCLGKNMIG 125

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             GA  +AE +K   +LL ++L  N I          ALK N  +  ++L  N I   GA
Sbjct: 126 NAGAQKIAEALK-VSTLLILDLQQNQIAARAQAIAE-ALKVNTKLKELNLHQNQIGVVGA 183

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            AIA  LK N+ +TSL LA N IG  G +A++E LK +  +  L L   +IG +GA+ +A
Sbjct: 184 QAIAEALKANTTLTSLFLARNQIGDAGTQAIAEALKVNTRLTVLHLNENEIGDAGAQAIA 243

Query: 493 DMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           + L  N  +  L L AN + D GA+ +A +FK +N  L  I L  N I    A AI
Sbjct: 244 EALTVNTKLGDLFLSANQIGDAGAQAIADTFK-LNPRLEYITLTKNYIDKVCAHAI 298



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/286 (36%), Positives = 154/286 (53%), Gaps = 3/286 (1%)

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N + D GV+ L   L  N  +  L L+   + D GA+A AE LK N+ L  L L+ 
Sbjct: 6   SLGTNQMDDGGVRALAFALNMNHTLTGLSLNGNQIGDAGAEAAAEALKMNTTLTELSLHC 65

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I ++G +++AEAL  N +++ L+L  N     GA A+A+ L+ N  L +L L  N IG
Sbjct: 66  NQIRHAGASAIAEALKVNKSLKVLNLEMNQLFDDGAEAIAEALKVNTGLTKLCLGKNMIG 125

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G + +   L  +   L +LD+  N I+A+          N K L  +NL+ N IG  G
Sbjct: 126 NAGAQKIAEAL--KVSTLLILDLQQNQIAARAQAIAEALKVNTK-LKELNLHQNQIGVVG 182

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+ IA+ALK N T+T++ L  N I   G  AIA  LK N+ +T L L  N IG  GA+A+
Sbjct: 183 AQAIAEALKANTTLTSLFLARNQIGDAGTQAIAEALKVNTRLTVLHLNENEIGDAGAQAI 242

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           +E L  +  +  L L   QIG +GA+ +AD  + N  +  + L  N
Sbjct: 243 AEALTVNTKLGDLFLSANQIGDAGAQAIADTFKLNPRLEYITLTKN 288



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 142/274 (51%), Gaps = 3/274 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
              + + ++G   GD G    AE+L  N T  E+S   N I  AG  A    L+ N +LK
Sbjct: 28  HTLTGLSLNGNQIGDAGAEAAAEALKMNTTLTELSLHCNQIRHAGASAIAEALKVNKSLK 87

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N + D+G + + + L  N G+ +L L    + + GA+ IAE LK +++L +L+L
Sbjct: 88  VLNLEMNQLFDDGAEAIAEALKVNTGLTKLCLGKNMIGNAGAQKIAEALKVSTLL-ILDL 146

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I  +   ++AEAL  N+ ++ L+L+ N  G +GA A+A+ L+ N +L  L L  N 
Sbjct: 147 QQNQI-AARAQAIAEALKVNTKLKELNLHQNQIGVVGAQAIAEALKANTTLTSLFLARNQ 205

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD G +A+   L     +L VL +  N I   GA  +AE +     L  + L  N IGD
Sbjct: 206 IGDAGTQAIAEALKVNT-RLTVLHLNENEIGDAGAQAIAEALTVNTKLGDLFLSANQIGD 264

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
            GA+ IAD  K N  +  I L  N I    A AI
Sbjct: 265 AGAQAIADTFKLNPRLEYITLTKNYIDKVCAHAI 298



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/288 (36%), Positives = 143/288 (49%), Gaps = 3/288 (1%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G+  LA +L  N T   +S   N I  AG +A    L+ N  L  L+L  N I   G 
Sbjct: 14  DGGVRALAFALNMNHTLTGLSLNGNQIGDAGAEAAAEALKMNTTLTELSLHCNQIRHAGA 73

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
             + + L  N  ++ L L    L D+GA+AIAE LK N+ L  L L  NMI  +G   +A
Sbjct: 74  SAIAEALKVNKSLKVLNLEMNQLFDDGAEAIAEALKVNTGLTKLCLGKNMIGNAGAQKIA 133

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           EA L+ ST+  L L  N   A  A A+A+ L+ N  L+EL+LH N IG  G +A+   L 
Sbjct: 134 EA-LKVSTLLILDLQQNQ-IAARAQAIAEALKVNTKLKELNLHQNQIGVVGAQAIAEALK 191

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           +    L  L +  N I   G   +AE +K    L  ++L  N+IGD GA+ IA+AL  N 
Sbjct: 192 ANT-TLTSLFLARNQIGDAGTQAIAEALKVNTRLTVLHLNENEIGDAGAQAIAEALTVNT 250

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            +  + L  N I   GA AIA   K N  +  + L  N I    A A+
Sbjct: 251 KLGDLFLSANQIGDAGAQAIADTFKLNPRLEYITLTKNYIDKVCAHAI 298



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 113/231 (48%), Gaps = 32/231 (13%)

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N + D G   +A AL  N T+T + L GN I   GA A A  LK N+ +T L L  
Sbjct: 6   SLGTNQMDDGGVRALAFALNMNHTLTGLSLNGNQIGDAGAEAAAEALKMNTTLTELSLHC 65

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N I   GA A++E LK + ++  L L   Q+   GAE +A+ L+ N  ++ L L  N + 
Sbjct: 66  NQIRHAGASAIAEALKVNKSLKVLNLEMNQLFDDGAEAIAEALKVNTGLTKLCLGKNMIG 125

Query: 513 DEGAKCLAQSFKV-------------------------VNEALTSIDLAFNEIRDDGAFA 547
           + GA+ +A++ KV                         VN  L  ++L  N+I   GA A
Sbjct: 126 NAGAQKIAEALKVSTLLILDLQQNQIAARAQAIAEALKVNTKLKELNLHQNQIGVVGAQA 185

Query: 548 IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL-----VYEMSEKEV 593
           IA+ALKAN    +TSL LA N +   G  A+ +A  +     V  ++E E+
Sbjct: 186 IAEALKAN--TTLTSLFLARNQIGDAGTQAIAEALKVNTRLTVLHLNENEI 234



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 83/177 (46%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  LK LNL  N IG  G + + + L  N  +  L L+   + D G +AIAE LK N
Sbjct: 162 LKVNTKLKELNLHQNQIGVVGAQAIAEALKANTTLTSLFLARNQIGDAGTQAIAEALKVN 221

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L VL LN N I  +G  ++AEAL  N+ +  L L+ N  G  GA A+A   + N  L 
Sbjct: 222 TRLTVLHLNENEIGDAGAQAIAEALTVNTKLGDLFLSANQIGDAGAQAIADTFKLNPRLE 281

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            + L  N I      A+ +   S +G      I    IS       A+ ++    LL
Sbjct: 282 YITLTKNYIDKVCAHAIHACTYSGRGAYTYPQISPLVISTLPQLVTADDLETVFCLL 338


>gi|421897032|ref|ZP_16327415.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
 gi|206588197|emb|CAQ18765.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
          Length = 625

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 167/571 (29%), Positives = 259/571 (45%), Gaps = 105/571 (18%)

Query: 33  APLSFALPFSGTRRCFRLKRLVVKAAARPEGGRRQRRVYRQ--SQSDNALTTAPVKQIAS 90
           APL   LP          +R+ V A ARP   R  R V R+  + S   +T   ++  A 
Sbjct: 81  APLQQTLPTE------LWQRIGVSAGARPR--RAMREVNRELRNASRAVVTHLTIRDPAM 132

Query: 91  FVVPAGVFVSATFVLWK--LVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFR 148
           F    G + + T V +K  L  + L   P     P  E ++ S   G  + +     L  
Sbjct: 133 FAH-LGKYPALTSVRFKGELTLEALKALP-----PGVEHLDISRCTGRGVSNAGLAHLAT 186

Query: 149 ESKQTLNEFAKELRA-----------FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF 197
              ++L+    E+ A            +S+ ++G + GD     LA+S    ++   +  
Sbjct: 187 RPLKSLSLNGIEIDAEGARLLATCASLTSLSLTGCSIGDRAATALAQS----RSIASLDL 242

Query: 198 AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
           + N I   G +A      ++  L +LNL  N IGDEG   L      +  ++ L  S+  
Sbjct: 243 SVNMIGPDGARAL-----ASAPLLSLNLHNNGIGDEGALALAT----SGTLKSLNASNNG 293

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           + D G    A+    N++L  L L  NMI  +G    A AL  N+++  L L+ N  G  
Sbjct: 294 IGDAGVLGFAD----NTVLTQLNLAGNMIGPAG----ARALRRNTSLTELDLSTNRLGDA 345

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA- 376
           GA  LA    G++SL  L+L  N IGD+G  AL     +R   L  L++  N I   GA 
Sbjct: 346 GAQVLA----GSRSLTSLNLRHNEIGDDGTEAL-----ARNTTLKSLNLSYNPIGFWGAG 396

Query: 377 -------------------FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
                               + A  +    SL  ++L  N IGD+GA     AL  +RT+
Sbjct: 397 ALGGSTTLRELDLRCCAIDPYGASALARNTSLASLHLGSNRIGDDGAR----ALATSRTL 452

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           T +DL  NNIH  GA A+A     N  +TSL+L  N +  DGA AL++    H  + +L 
Sbjct: 453 TLLDLSRNNIHDAGAQALA----GNGSLTSLNLYGNEVDDDGAAALAQ----HPRLTSLN 504

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           LG  +IG +GA+ +A     + T++ LDL  N +  EGA+ L+     ++  LT+++++ 
Sbjct: 505 LGRNRIGPNGAQHLA----KSATLTELDLSENRIGPEGAEALS-----LSTVLTTLNVSG 555

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           N I + GA A A+     +  ++TSL+  NN
Sbjct: 556 NAIGEKGARAFAE-----KSTSLTSLDARNN 581


>gi|417515989|gb|JAA53796.1| NACHT, LRR and PYD domains-containing protein 12-like protein [Sus
            scrofa]
          Length = 1050

 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 180/397 (45%), Gaps = 9/397 (2%)

Query: 192  AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVER 250
             +E+      +T++  +    V ++N  L  L    N + D G+K LC+ L   N  ++ 
Sbjct: 618  VKELKLIFCHLTSSYGRDLSLVFETNQYLTDLEFVKNTLEDSGMKLLCEGLKQPNCILQT 677

Query: 251  LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHL 309
            L+L    +      A+A +L  N  L  LE +   ++ S    L E L + N  ++ L L
Sbjct: 678  LRLYRCLIPSASCGALAAVLSTNQWLTELEFSETKLEASALKLLCEGLKDPNCKVQKLKL 737

Query: 310  NGNY---GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
              ++           LA  L  N +L EL L  N +GD G++ L  GL     K+  LD+
Sbjct: 738  CASFLPGSSEAVCKYLASVLICNPNLTELDLSENPLGDTGVKHLCEGLRHSNCKVEKLDL 797

Query: 367  GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGN 425
               S++      ++ +++  ++L  + ++ N +GD G + + + L     TI  + L   
Sbjct: 798  STCSLTDASCVELSSFLQVSQTLKELFVFANALGDTGVQHLCEGLHHPSGTIQNLVLSEC 857

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIG 484
            ++ +    ++A+VL     +T L L  N I   G K L E LK     +  L L  C + 
Sbjct: 858  SLSAACCESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQPDCQLKDLSLWTCHLT 917

Query: 485  ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
                + + D L  N  + +LDL  N L DEG + L +  K  +  L ++ LA   + D  
Sbjct: 918  GECCQDLCDALYTNEHLRVLDLSDNALGDEGMQVLCEGLKHPSCKLQTLWLAECHLTDAC 977

Query: 545  AFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
              A+A  LK NE+  +T L+L+ N L  FG   L DA
Sbjct: 978  CGALASVLKRNEN--LTLLDLSGNDLKDFGVQMLCDA 1012



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 169/373 (45%), Gaps = 18/373 (4%)

Query: 176  DEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
            D G+  L E L   N   + +      I +A   A   VL +N  L  L  S   +    
Sbjct: 658  DSGMKLLCEGLKQPNCILQTLRLYRCLIPSASCGALAAVLSTNQWLTELEFSETKLEASA 717

Query: 235  VKCLCDILVD-NAGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
            +K LC+ L D N  V++L+L +  L    +   K +A +L  N  L  L+L+ N +  +G
Sbjct: 718  LKLLCEGLKDPNCKVQKLKLCASFLPGSSEAVCKYLASVLICNPNLTELDLSENPLGDTG 777

Query: 291  FTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
               L E L   N  +  L L+           L+  L+ +++L+EL +  N++GD G++ 
Sbjct: 778  VKHLCEGLRHSNCKVEKLDLSTCSLTDASCVELSSFLQVSQTLKELFVFANALGDTGVQH 837

Query: 350  LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
            L  GL    G +  L +   S+SA     +A+ + + +SL  + L  N I D G + + +
Sbjct: 838  LCEGLHHPSGTIQNLVLSECSLSAACCESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCE 897

Query: 410  ALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             LKQ +  +  + L   ++  +    +   L  N  +  LDL+ N +G +G + L E LK
Sbjct: 898  GLKQPDCQLKDLSLWTCHLTGECCQDLCDALYTNEHLRVLDLSDNALGDEGMQVLCEGLK 957

Query: 469  FHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA----------K 517
                 + TL L  C +  +    +A +L+ N  +++LDL  N L+D G           K
Sbjct: 958  HPSCKLQTLWLAECHLTDACCGALASVLKRNENLTLLDLSGNDLKDFGVQMLCDALIDPK 1017

Query: 518  CLAQSFKVVNEAL 530
            C  Q+F +  + L
Sbjct: 1018 CRLQTFYIDTDHL 1030



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 14/281 (4%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +D+S    GD G+  L E L + N   E++  +   +T A        LQ +  LK 
Sbjct: 763  LTELDLSENPLGDTGVKHLCEGLRHSNCKVEKLDLSTCSLTDASCVELSSFLQVSQTLKE 822

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L +  N +GD GV+ LC+ L   +G ++ L LS   L     +++A++L +   L  L L
Sbjct: 823  LFVFANALGDTGVQHLCEGLHHPSGTIQNLVLSECSLSAACCESLAQVLSSTRSLTRLLL 882

Query: 282  NNNMIDYSGFTSLAEAL------LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
             NN I+  G   L E L      L++ ++ + HL G          L   L  N+ LR L
Sbjct: 883  INNKIEDLGLKLLCEGLKQPDCQLKDLSLWTCHLTGE-----CCQDLCDALYTNEHLRVL 937

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L  N++GDEG++ L  GL     KL  L +    ++      +A  +K  ++L  ++L 
Sbjct: 938  DLSDNALGDEGMQVLCEGLKHPSCKLQTLWLAECHLTDACCGALASVLKRNENLTLLDLS 997

Query: 396  MNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
             ND+ D G + + DAL   +  + T  +  +++H +    I
Sbjct: 998  GNDLKDFGVQMLCDALIDPKCRLQTFYIDTDHLHEETFRKI 1038



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 13/228 (5%)

Query: 147  FRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQ-TAEEVSFAANGITAA 205
            F +  QTL    KEL  F++        GD G+  L E L +   T + +  +   ++AA
Sbjct: 813  FLQVSQTL----KELFVFANA------LGDTGVQHLCEGLHHPSGTIQNLVLSECSLSAA 862

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
              ++   VL S  +L  L L  N I D G+K LC+ L   +  ++ L L +  L  E  +
Sbjct: 863  CCESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQPDCQLKDLSLWTCHLTGECCQ 922

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALA 323
             + + L  N  LRVL+L++N +   G   L E L   S  +++L L   +       ALA
Sbjct: 923  DLCDALYTNEHLRVLDLSDNALGDEGMQVLCEGLKHPSCKLQTLWLAECHLTDACCGALA 982

Query: 324  KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
              L+ N++L  L L GN + D G++ L   L   K +L    I  + +
Sbjct: 983  SVLKRNENLTLLDLSGNDLKDFGVQMLCDALIDPKCRLQTFYIDTDHL 1030


>gi|398303848|ref|NP_001257691.1| ribonuclease inhibitor isoform a [Rattus norvegicus]
 gi|149061561|gb|EDM11984.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_b [Rattus
           norvegicus]
          Length = 492

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 192/397 (48%), Gaps = 10/397 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S     +T AG      VL+S   L
Sbjct: 88  ALTELSLRTNELGDAGVGLVLQGL-QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTL 146

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GDEG+K LC+ L D    +E+LQL   +L     + +A +L+     + L
Sbjct: 147 RELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKEL 206

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN    +G  +L + L +++  + SL L      +     L   +    SL+EL L 
Sbjct: 207 VLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQELDLG 266

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL SGL     +L  L + +  ++A+G   +   ++  +SL  ++L  N+
Sbjct: 267 SNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNE 326

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA+ + ++ L+    + ++ +   ++ +        VL  N  +  L ++ NP+G 
Sbjct: 327 LKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGD 386

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            G   L + L +   +   L LG C +  SG   +A +L  N ++  LDL  N + D G 
Sbjct: 387 SGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMGDTGV 446

Query: 517 KCLAQSFKVVNEALTSI---DLAFNEIRDDGAFAIAQ 550
             L +S K  + AL  +   D+ + +  +D   A+ +
Sbjct: 447 LQLLESLKQPSCALQQLVLYDIYWTDEVEDQLRALEE 483



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 147/320 (45%), Gaps = 4/320 (1%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            L +  + L     + ++    GDEGL  L E L   Q   E++      +TA   +   
Sbjct: 135 VLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLA 194

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
            VL+     K L LS N   + G+  LC  L D+A  +E L+L +  +     K + +++
Sbjct: 195 SVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVV 254

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGN 329
            + + L+ L+L +N +  +G  +L   LL  S  +R+L L      A G   L + L   
Sbjct: 255 ASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAK 314

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +SL+EL L GN + DEG + L   L     +L  L +   S++A    H    +   +SL
Sbjct: 315 QSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSL 374

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             + +  N +GD G  ++  AL    T+   + LG  ++   G S++A VL  N  +  L
Sbjct: 375 FELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLREL 434

Query: 449 DLAYNPIGADGAKALSEVLK 468
           DL+ N +G  G   L E LK
Sbjct: 435 DLSNNCMGDTGVLQLLESLK 454



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 174/396 (43%), Gaps = 6/396 (1%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
            E L   Q  + V     G+T    K     +Q+N AL  L+L  N +GD GV  +   L
Sbjct: 52  TELLPLIQQYQVVRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGL 111

Query: 243 VD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
            +    +++L L +  L + G   + ++L++ S LR L LN+N +   G   L E L + 
Sbjct: 112 QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDP 171

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL L  N   + GI  L  GL     +
Sbjct: 172 QCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQ 231

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITT 419
           L  L + N  I++     + + + +  SL  ++L  N +G+ G   +   L   +  + T
Sbjct: 232 LESLKLENCGITSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRT 291

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + L   ++ ++G   + RVL+    +  L LA N +  +GA+ L E L   G  + +L +
Sbjct: 292 LWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWV 351

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
             C + A+       +L  N ++  L + +N L D G   L ++    +  L  + L   
Sbjct: 352 KTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDC 411

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           ++ D G  ++A  L AN   ++  L+L+NN +   G
Sbjct: 412 DVTDSGCSSLATVLLANR--SLRELDLSNNCMGDTG 445



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 6/185 (3%)

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +C   + +++    + D    ++   ++Q + +   D G   +  K    I   ++ N  
Sbjct: 32  HCAPTMSLDIQCEQLSDARWTELLPLIQQYQVVRLDDCGLTEVRCKD---IRSAIQANPA 88

Query: 445 ITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           +T L L  N +G  G   + + L+     I  L L  C +  +G   + D+LR  +T+  
Sbjct: 89  LTELSLRTNELGDAGVGLVLQGLQNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRE 148

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           L L  N L DEG K L +  +     L  + L +  +       +A  L+   D     L
Sbjct: 149 LHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLASVLRVKPDFK--EL 206

Query: 564 NLANN 568
            L+NN
Sbjct: 207 VLSNN 211


>gi|57671|emb|CAA44388.1| ribonuclease inhibitor [Rattus norvegicus]
          Length = 456

 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 192/397 (48%), Gaps = 10/397 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S     +T AG      VL+S   L
Sbjct: 52  ALTELSLRTNELGDAGVGLVLQGL-QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GDEG+K LC+ L D    +E+LQL   +L     + +A +L+     + L
Sbjct: 111 RELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN    +G  +L + L +++  + SL L      +     L   +    SL+EL L 
Sbjct: 171 VLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQELDLG 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL SGL     +L  L + +  ++A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNE 290

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA+ + ++ L+    + ++ +   ++ +        VL  NS +  L ++ NP+G 
Sbjct: 291 LKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNSSLFELQMSSNPLGD 350

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            G   L + L +   +   L LG C +  SG   +A +L  N ++  LDL  N + D G 
Sbjct: 351 SGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMGDNGV 410

Query: 517 KCLAQSFK---VVNEALTSIDLAFNEIRDDGAFAIAQ 550
             L +S K    + + L   D+ + +  +D   A+ +
Sbjct: 411 LQLLESLKQPSCILQQLVLYDIYWTDEVEDQLRALEE 447



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 174/392 (44%), Gaps = 6/392 (1%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
            E L   Q  + V     G+T    K     +Q+N AL  L+L  N +GD GV  +   L
Sbjct: 16  TELLPLIQQYQVVRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGL 75

Query: 243 VD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
            +    +++L L +  L + G   + ++L++ S LR L LN+N +   G   L E L + 
Sbjct: 76  QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL L  N   + GI  L  GL     +
Sbjct: 136 QCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQ 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITT 419
           L  L + N  I++     + + + +  SL  ++L  N +G+ G   +   L   +  + T
Sbjct: 196 LESLKLENCGITSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRT 255

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + L   ++ ++G   + RVL+    +  L LA N +  +GA+ L E L   G  + +L +
Sbjct: 256 LWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWV 315

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
             C + A+       +L  N+++  L + +N L D G   L ++    +  L  + L   
Sbjct: 316 KTCSLTAASCPHFCSVLTKNSSLFELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDC 375

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           ++ D G  ++A  L AN   ++  L+L+NN +
Sbjct: 376 DVTDSGCSSLATVLLANR--SLRELDLSNNCM 405



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 144/351 (41%), Gaps = 40/351 (11%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            L +  + L     + ++    GDEGL  L E L   Q   E++      +TA   +   
Sbjct: 99  VLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLA 158

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
            VL+     K L LS N   + G+  LC  L D+A  +E L+L +  +     K + +++
Sbjct: 159 SVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVV 218

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGN 329
            + + L+ L+L +N +  +G  +L   LL  S  +R+L L      A G   L + L   
Sbjct: 219 ASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAK 278

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI-KN--- 385
           +SL+EL L GN + DEG + L   L     +L  L +   S++A    H    + KN   
Sbjct: 279 QSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNSSL 338

Query: 386 ------------------CKSL---------LWINLYMNDIGDEGAEKIADALKQNRTIT 418
                             CK+L         LW+     D+ D G   +A  L  NR++ 
Sbjct: 339 FELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLG--DCDVTDSGCSSLATVLLANRSLR 396

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITS----LDLAYNPIGADGAKALSE 465
            +DL  N +   G   +   LK  S I       D+ +     D  +AL E
Sbjct: 397 ELDLSNNCMGDNGVLQLLESLKQPSCILQQLVLYDIYWTDEVEDQLRALEE 447



 Score = 42.7 bits (99), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 14/177 (7%)

Query: 401 DEGAEKIADA--------LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           D   E+++DA        ++Q + +   D G   +  K    I   ++ N  +T L L  
Sbjct: 4   DIQCEQLSDARWTELLPLIQQYQVVRLDDCGLTEVRCKD---IRSAIQANPALTELSLRT 60

Query: 453 NPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           N +G  G   + + L+     I  L L  C +  +G   + D+LR  +T+  L L  N L
Sbjct: 61  NELGDAGVGLVLQGLQNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPL 120

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            DEG K L +  +     L  + L +  +       +A  L+   D     L L+NN
Sbjct: 121 GDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLASVLRVKPDFK--ELVLSNN 175


>gi|32966215|gb|AAP92144.1| leucine-rich repeat protein N5C [synthetic construct]
          Length = 358

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 141/274 (51%), Gaps = 3/274 (1%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERL 251
           E +    N +T AG+K    VL+SN +L+ LNLS N +GD GV+ L   L+D    +E+L
Sbjct: 42  ERLWLENNDLTEAGLKDLASVLRSNPSLRELNLSHNKLGDAGVRLLLQGLLDPGTRLEKL 101

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLN 310
            L+  DL + G K +A +L++N  LR L L+ N +  +G   L + LL+  T +  L+L 
Sbjct: 102 DLNDTDLTEAGVKDLASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLE 161

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N     G   LA  L  N SLREL+L  N +GD G+R L+ GL     +L  L + N  
Sbjct: 162 DNDLTEAGLKDLASVLRSNPSLRELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTD 221

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHS 429
           ++  G   +A  +++  SL  ++L  N +GD G   +   L    T +  + L   ++  
Sbjct: 222 LTEAGVEDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTDLTE 281

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            G   +A VL+ N  +  L L+ N +G  G + L
Sbjct: 282 AGMKDLASVLRSNPSLRELSLSTNKLGDAGVRLL 315



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 134/264 (50%), Gaps = 6/264 (2%)

Query: 154 LNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKA 209
           L + A  LR+  S+   ++S    GD G+  L + L    T  E++      +T AG+K 
Sbjct: 56  LKDLASVLRSNPSLRELNLSHNKLGDAGVRLLLQGLLDPGTRLEKLDLNDTDLTEAGVKD 115

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAE 268
              VL+SN +L+ L+LS N +GD GV+ L   L+D    +E+L L   DL + G K +A 
Sbjct: 116 LASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLEDNDLTEAGLKDLAS 175

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLE 327
           +L++N  LR L L++N +  +G   L + LL+  T +  L L        G   LA  L 
Sbjct: 176 VLRSNPSLRELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTDLTEAGVEDLASVLR 235

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            N SLREL L  N +GD G+R L+ GL     +L  L + N  ++  G   +A  +++  
Sbjct: 236 SNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTDLTEAGMKDLASVLRSNP 295

Query: 388 SLLWINLYMNDIGDEGAEKIADAL 411
           SL  ++L  N +GD G   +   L
Sbjct: 296 SLRELSLSTNKLGDAGVRLLLQGL 319



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 6/210 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +   + +S    GD G+  L + L    T  E++    N +T AG+K    VL+SN +L+
Sbjct: 125 SLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLEDNDLTEAGLKDLASVLRSNPSLR 184

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            LNLS N +GD GV+ L   L+D    +E LQL + DL + G + +A +L++N  LR L 
Sbjct: 185 ELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTDLTEAGVEDLASVLRSNPSLRELS 244

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           L+NN +  +G   L + LL+  T +  L+L        G   LA  L  N SLREL L  
Sbjct: 245 LSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTDLTEAGMKDLASVLRSNPSLRELSLST 304

Query: 340 NSIGDEGIRALMSGL---SSRKGKLAVLDI 366
           N +GD G+R L+ GL    +R  +L + DI
Sbjct: 305 NKLGDAGVRLLLQGLLDPGTRLEQLVLYDI 334



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 124/259 (47%), Gaps = 4/259 (1%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   LA  L  N SLREL+L  N +GD G+R L+ GL     +L  LD+ +  ++  G  
Sbjct: 55  GLKDLASVLRSNPSLRELNLSHNKLGDAGVRLLLQGLLDPGTRLEKLDLNDTDLTEAGVK 114

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIA 436
            +A  +++  SL  ++L  N +GD G   +   L    T +  + L  N++   G   +A
Sbjct: 115 DLASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLEDNDLTEAGLKDLA 174

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADML 495
            VL+ N  +  L+L+ N +G  G + L + L   G  +  L+L    +  +G E +A +L
Sbjct: 175 SVLRSNPSLRELNLSDNKLGDAGVRLLLQGLLDPGTRLEELQLRNTDLTEAGVEDLASVL 234

Query: 496 RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           R N ++  L L  N L D G + L Q        L  + L   ++ + G   +A  L++N
Sbjct: 235 RSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTDLTEAGMKDLASVLRSN 294

Query: 556 EDVAVTSLNLANNFLTKFG 574
              ++  L+L+ N L   G
Sbjct: 295 P--SLRELSLSTNKLGDAG 311



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 4/242 (1%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L +    + D     L+  L     +L  L + NN ++  G   +A  +++  SL  +NL
Sbjct: 15  LDIQSEELSDARWAELLPLLQQPYARLERLWLENNDLTEAGLKDLASVLRSNPSLRELNL 74

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +GD G   +   L    T +  +DL   ++   G   +A VL+ N  +  L L+ N
Sbjct: 75  SHNKLGDAGVRLLLQGLLDPGTRLEKLDLNDTDLTEAGVKDLASVLRSNPSLRELSLSTN 134

Query: 454 PIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            +G  G + L + L   G  +  L L    +  +G + +A +LR N ++  L+L  N L 
Sbjct: 135 KLGDAGVRLLLQGLLDPGTRLEKLYLEDNDLTEAGLKDLASVLRSNPSLRELNLSDNKLG 194

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           D G + L Q        L  + L   ++ + G   +A  L++N   ++  L+L+NN L  
Sbjct: 195 DAGVRLLLQGLLDPGTRLEELQLRNTDLTEAGVEDLASVLRSNP--SLRELSLSNNKLGD 252

Query: 573 FG 574
            G
Sbjct: 253 AG 254


>gi|326435101|gb|EGD80671.1| hypothetical protein PTSG_11700 [Salpingoeca sp. ATCC 50818]
          Length = 1594

 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 96/269 (35%), Positives = 138/269 (51%), Gaps = 29/269 (10%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           + +N   + ++L  V L D G +A+AE LK+N+ L+ L L+NN I  +G  +L E L  N
Sbjct: 69  IANNTCRDSVRLRKVGLGDSGGRAVAEALKDNTCLKDLRLHNNSIGDAGAVALTEMLKHN 128

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           +T+  L LNGN  G  GA ALA+ L+ N +L  L LH NSIGD G  AL           
Sbjct: 129 TTLEQLFLNGNSIGPGGAVALAEMLKLNTTLTLLSLHHNSIGDAGAVAL----------- 177

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
                             AE +K+  ++  +NL  N IGD     +A+ LK N T+ T+ 
Sbjct: 178 ------------------AEMLKHNTTITVLNLSANSIGDAAVVALAEVLKHNTTLKTLY 219

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N+I  +GA A+A +LK N+ +T+LDL  N I  DGA AL+E L+ +  +  L L   
Sbjct: 220 LSINHISDEGAVALAEMLKHNTTLTTLDLQSNGISDDGAVALAEKLQHNTTLKALTLFSN 279

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANG 510
            I   G   +   L  N T+  L ++ N 
Sbjct: 280 SITPVGGAALGAALDQNRTLETLCMKKNS 308



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 136/251 (54%), Gaps = 15/251 (5%)

Query: 345 EGIRALMSGLSSRK-GKLAVLDIGNNS-----------ISAKGAFHVAEYIKNCKSLLWI 392
           E + AL++   S+K  K  +  I NN+           +   G   VAE +K+   L  +
Sbjct: 47  ESMEALLAKTKSKKWDKDCIRAIANNTCRDSVRLRKVGLGDSGGRAVAEALKDNTCLKDL 106

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L+ N IGD GA  + + LK N T+  + L GN+I   GA A+A +LK N+ +T L L +
Sbjct: 107 RLHNNSIGDAGAVALTEMLKHNTTLEQLFLNGNSIGPGGAVALAEMLKLNTTLTLLSLHH 166

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA AL+E+LK +  I  L L    IG +    +A++L++N T+  L L  N + 
Sbjct: 167 NSIGDAGAVALAEMLKHNTTITVLNLSANSIGDAAVVALAEVLKHNTTLKTLYLSINHIS 226

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           DEGA  LA+  K  N  LT++DL  N I DDGA A+A+ L+ N    + +L L +N +T 
Sbjct: 227 DEGAVALAEMLKH-NTTLTTLDLQSNGISDDGAVALAEKLQHN--TTLKALTLFSNSITP 283

Query: 573 FGQSALTDAKD 583
            G +AL  A D
Sbjct: 284 VGGAALGAALD 294



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 1/242 (0%)

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           ++  N   + V     G+  +G +A    L+ N  LK L L  N IGD G   L ++L  
Sbjct: 68  AIANNTCRDSVRLRKVGLGDSGGRAVAEALKDNTCLKDLRLHNNSIGDAGAVALTEMLKH 127

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  +E+L L+   +   GA A+AE+LK N+ L +L L++N I  +G  +LAE L  N+TI
Sbjct: 128 NTTLEQLFLNGNSIGPGGAVALAEMLKLNTTLTLLSLHHNSIGDAGAVALAEMLKHNTTI 187

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
             L+L+ N  G     ALA+ L+ N +L+ L+L  N I DEG  AL   L      L  L
Sbjct: 188 TVLNLSANSIGDAAVVALAEVLKHNTTLKTLYLSINHISDEGAVALAEML-KHNTTLTTL 246

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+ +N IS  GA  +AE +++  +L  + L+ N I   G   +  AL QNRT+ T+ +  
Sbjct: 247 DLQSNGISDDGAVALAEKLQHNTTLKALTLFSNSITPVGGAALGAALDQNRTLETLCMKK 306

Query: 425 NN 426
           N+
Sbjct: 307 NS 308



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 124/241 (51%), Gaps = 30/241 (12%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G  A+A+ L+ N  L++L LH NSIGD                              
Sbjct: 86  GDSGGRAVAEALKDNTCLKDLRLHNNSIGD-----------------------------A 116

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  + E +K+  +L  + L  N IG  GA  +A+ LK N T+T + L  N+I   GA A
Sbjct: 117 GAVALTEMLKHNTTLEQLFLNGNSIGPGGAVALAEMLKLNTTLTLLSLHHNSIGDAGAVA 176

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A +LK N+ IT L+L+ N IG     AL+EVLK +  + TL L    I   GA  +A+M
Sbjct: 177 LAEMLKHNTTITVLNLSANSIGDAAVVALAEVLKHNTTLKTLYLSINHISDEGAVALAEM 236

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L++N T++ LDL++NG+ D+GA  LA+  +  N  L ++ L  N I   G  A+  AL  
Sbjct: 237 LKHNTTLTTLDLQSNGISDDGAVALAEKLQ-HNTTLKALTLFSNSITPVGGAALGAALDQ 295

Query: 555 N 555
           N
Sbjct: 296 N 296



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 98/188 (52%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K       + ++G + G  G   LAE L  N T   +S   N I  AG  A   +
Sbjct: 121 LTEMLKHNTTLEQLFLNGNSIGPGGAVALAEMLKLNTTLTLLSLHHNSIGDAGAVALAEM 180

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  +  LNLS N IGD  V  L ++L  N  ++ L LS   + DEGA A+AE+LK+N
Sbjct: 181 LKHNTTITVLNLSANSIGDAAVVALAEVLKHNTTLKTLYLSINHISDEGAVALAEMLKHN 240

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L  L+L +N I   G  +LAE L  N+T+++L L  N    +G  AL   L+ N++L 
Sbjct: 241 TTLTTLDLQSNGISDDGAVALAEKLQHNTTLKALTLFSNSITPVGGAALGAALDQNRTLE 300

Query: 334 ELHLHGNS 341
            L +  NS
Sbjct: 301 TLCMKKNS 308



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 1/205 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GD G   L E L +N T E++    N I   G  A   +L+ N  L  L+L  N IGD
Sbjct: 112 SIGDAGAVALTEMLKHNTTLEQLFLNGNSIGPGGAVALAEMLKLNTTLTLLSLHHNSIGD 171

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G   L ++L  N  +  L LS+  + D    A+AE+LK+N+ L+ L L+ N I   G  
Sbjct: 172 AGAVALAEMLKHNTTITVLNLSANSIGDAAVVALAEVLKHNTTLKTLYLSINHISDEGAV 231

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LAE L  N+T+ +L L  N     GA ALA+ L+ N +L+ L L  NSI   G  AL +
Sbjct: 232 ALAEMLKHNTTLTTLDLQSNGISDDGAVALAEKLQHNTTLKALTLFSNSITPVGGAALGA 291

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAF 377
            L   +  L  L +  NS +   AF
Sbjct: 292 ALDQNR-TLETLCMKKNSTTTARAF 315


>gi|410684076|ref|YP_006060083.1| leucine-rich-repeat type III effector protein (GALA1-like)
           [Ralstonia solanacearum CMR15]
 gi|299068565|emb|CBJ39793.1| leucine-rich-repeat type III effector protein (GALA1-like)
           [Ralstonia solanacearum CMR15]
          Length = 555

 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 134/436 (30%), Positives = 207/436 (47%), Gaps = 78/436 (17%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A  S+ + GR F DE L  L  SL     A ++S     ITAAGI        S + L  
Sbjct: 134 ALESLTLEGR-FTDEDLATLPASL----KALDLSRCGRQITAAGIAHL-----SELPLAE 183

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+  N IGDEG +    +L  +  +  L ++S  + D GA+A+A     N+ L  L+++
Sbjct: 184 LNVRNNWIGDEGAR----LLAAHPTLTTLNVASNGIGDAGAQALAA----NTRLESLDIS 235

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA------------------- 323
            N I   G     +AL +N+T+++L+++ N  G  GA ALA                   
Sbjct: 236 FNEIGSDGV----QALADNATLKTLNISSNDIGDAGALALAVNTTLTELNTSCNRISDAG 291

Query: 324 -KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            + L  + SL  L +  N  GD G++A+ +    R+     LDI  N +S  G   VA  
Sbjct: 292 AQALANSDSLTSLDISDNGFGDAGVQAIAANTRLRR-----LDISRNRLSEAGVLAVAAN 346

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                +L  + +   +IG  GA+    AL  N  + ++D G N I ++GA A+AR    +
Sbjct: 347 ----TTLTKLCIADCEIGTAGAQ----ALAANTRLVSLDAGHNGIGTEGAQALAR----H 394

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +  L+L  NPIG  GA A ++    +  + +L L  C++  SG   +A     N T+ 
Sbjct: 395 ATLKQLNLEKNPIGDAGAVAFAD----NATLRSLNLKGCKVTDSGLRVLA----TNATLR 446

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L++  N +  EGAK  A      N  LTS+D++ N I D+GA A+A       +  +  
Sbjct: 447 TLNVSDNRITAEGAKATA-----ANSTLTSLDVSHNGIEDEGALALAA------NTVLNV 495

Query: 563 LNLANNFLTKFGQSAL 578
           LN+  N LT  G +AL
Sbjct: 496 LNICYNALTVKGVTAL 511



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 176/386 (45%), Gaps = 78/386 (20%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            ++++++    GD G    A++L  N   E +  + N I + G++A    L  N  LKTL
Sbjct: 205 LTTLNVASNGIGDAG----AQALAANTRLESLDISFNEIGSDGVQA----LADNATLKTL 256

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           N+S N IGD G       L  N  +  L  S   + D GA+A+A    N+  L  L++++
Sbjct: 257 NISSNDIGDAGALA----LAVNTTLTELNTSCNRISDAGAQALA----NSDSLTSLDISD 308

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N    +G     +A+  N+ +R L ++ N     G  A+A     N +L +L +    IG
Sbjct: 309 NGFGDAGV----QAIAANTRLRRLDISRNRLSEAGVLAVA----ANTTLTKLCIADCEIG 360

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             G +AL +       +L  LD G+N I  +GA  +A +     +L  +NL  N IGD G
Sbjct: 361 TAGAQALAA-----NTRLVSLDAGHNGIGTEGAQALARH----ATLKQLNLEKNPIGDAG 411

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A   AD    N T+ +++L G  +   G     RVL  N+ + +L+++ N I A+GAKA 
Sbjct: 412 AVAFAD----NATLRSLNLKGCKVTDSG----LRVLATNATLRTLNVSDNRITAEGAKAT 463

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
           +                                 N+T++ LD+  NG+ DEGA  LA   
Sbjct: 464 A--------------------------------ANSTLTSLDVSHNGIEDEGALALA--- 488

Query: 524 KVVNEALTSIDLAFNEIRDDGAFAIA 549
              N  L  +++ +N +   G  A+A
Sbjct: 489 --ANTVLNVLNICYNALTVKGVTALA 512



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 115/227 (50%), Gaps = 40/227 (17%)

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLS----SRKGKLAVLDIGNNSISAKGAFHVAEY 382
           EG  +L  L L G    DE +  L + L     SR G+          I+A G  H++E 
Sbjct: 130 EGYAALESLTLEGR-FTDEDLATLPASLKALDLSRCGR---------QITAAGIAHLSEL 179

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                 L  +N+  N IGDEGA  +A     + T+TT+++  N I   GA A+A     N
Sbjct: 180 -----PLAELNVRNNWIGDEGARLLA----AHPTLTTLNVASNGIGDAGAQALAA----N 226

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + + SLD+++N IG+DG +AL++    +  + TL +    IG +GA  +A     N T++
Sbjct: 227 TRLESLDISFNEIGSDGVQALAD----NATLKTLNISSNDIGDAGALALA----VNTTLT 278

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
            L+   N + D GA+ LA S     ++LTS+D++ N   D G  AIA
Sbjct: 279 ELNTSCNRISDAGAQALANS-----DSLTSLDISDNGFGDAGVQAIA 320


>gi|320167871|gb|EFW44770.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 215

 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 125/207 (60%), Gaps = 3/207 (1%)

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           Y +  K+  W++L+ ++ G  GA  +A+ALK N  +T +DL  N I  +GA AIA  LK 
Sbjct: 11  YHQVTKASGWLSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKV 70

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ +  LDL  N IG  GA+A +E LK + ++  L L   +IG +GA+ +A  +  N T+
Sbjct: 71  NTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTL 130

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N + D GA+ +A++ + VN  +  +DL  N+I D GA AIA+ALK N+   +T
Sbjct: 131 TKLHLYQNQIGDAGAQAIAEALR-VNTTVNQLDLWANQIGDIGAQAIAEALKVNK--TLT 187

Query: 562 SLNLANNFLTKFGQSALTDAKDLVYEM 588
           S+ L +NFLT+ G +AL +  +   E+
Sbjct: 188 SIRLEDNFLTEAGITALRETGNTSCEL 214



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 104/174 (59%), Gaps = 1/174 (0%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  VAE +K   ++  ++LY N IGDEGA+ IA+ALK N T+  +DL  N I   GA A
Sbjct: 32  GAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAEA 91

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            A  LK N  +  L L  N IG  GA+A++  +  +  +  L L   QIG +GA+ +A+ 
Sbjct: 92  FAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEA 151

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           LR N T++ LDL AN + D GA+ +A++ K VN+ LTSI L  N + + G  A+
Sbjct: 152 LRVNTTVNQLDLWANQIGDIGAQAIAEALK-VNKTLTSIRLEDNFLTEAGITAL 204



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 29/216 (13%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L  +  G  GA A+A+ L+ N ++  L L+ N IGDEG +A                 
Sbjct: 21  LSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDEGAQA----------------- 63

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
                       +AE +K   ++  ++L  N IGD GAE  A+ALK N+++  + L  N 
Sbjct: 64  ------------IAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNR 111

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I   GA AIAR +  N+ +T L L  N IG  GA+A++E L+ +  +N L L   QIG  
Sbjct: 112 IGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDI 171

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           GA+ +A+ L+ N T++ + L  N L + G   L ++
Sbjct: 172 GAQAIAEALKVNKTLTSIRLEDNFLTEAGITALRET 207



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 109/213 (51%), Gaps = 29/213 (13%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  +  G  G   + + L  N  V  L L    + DEGA+AIAE LK N+ + VL+L 
Sbjct: 21  LSLWQSEAGCAGAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLR 80

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  + AEAL  N ++  L+L  N  G  GA A+A+ +  N +L +LHL+ N I
Sbjct: 81  ENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQI 140

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A                             +AE ++   ++  ++L+ N IGD 
Sbjct: 141 GDAGAQA-----------------------------IAEALRVNTTVNQLDLWANQIGDI 171

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           GA+ IA+ALK N+T+T+I L  N +   G +A+
Sbjct: 172 GAQAIAEALKVNKTLTSIRLEDNFLTEAGITAL 204



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 81/154 (52%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG  A    L+ N A+  L+L  N IGDEG + + + L  N  V  L L    + D GA+
Sbjct: 31  AGAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAE 90

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A AE LK N  +  L L  N I  +G  ++A A++ N+T+  LHL  N  G  GA A+A+
Sbjct: 91  AFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAE 150

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
            L  N ++ +L L  N IGD G +A+   L   K
Sbjct: 151 ALRVNTTVNQLDLWANQIGDIGAQAIAEALKVNK 184



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 87/176 (49%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           G  G   +AE+L  N     +    N I   G +A    L+ N  +  L+L  N IGD G
Sbjct: 29  GCAGAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAG 88

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            +   + L  N  V  L L    + D GA+AIA  +  N+ L  L L  N I  +G  ++
Sbjct: 89  AEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAI 148

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           AEAL  N+T+  L L  N  G +GA A+A+ L+ NK+L  + L  N + + GI AL
Sbjct: 149 AEALRVNTTVNQLDLWANQIGDIGAQAIAEALKVNKTLTSIRLEDNFLTEAGITAL 204



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A + +D+     GDEG   +AE+L  N T   +    N I  AG +AF   L+ N ++  
Sbjct: 45  AVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVE 104

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L  N IGD G + +   +V N  + +L L    + D GA+AIAE L+ N+ +  L+L 
Sbjct: 105 LYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLW 164

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            N I   G  ++AEAL  N T+ S+ L  N+    G  AL
Sbjct: 165 ANQIGDIGAQAIAEALKVNKTLTSIRLEDNFLTEAGITAL 204



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 75/155 (48%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           +  ++  E  Q + E  K     + +D+     GD G    AE+L  N++  E+    N 
Sbjct: 52  YQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNR 111

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I  AG +A    +  N  L  L+L  N IGD G + + + L  N  V +L L +  + D 
Sbjct: 112 IGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDI 171

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
           GA+AIAE LK N  L  + L +N +  +G T+L E
Sbjct: 172 GAQAIAEALKVNKTLTSIRLEDNFLTEAGITALRE 206


>gi|167536250|ref|XP_001749797.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771724|gb|EDQ85386.1| predicted protein [Monosiga brevicollis MX1]
          Length = 445

 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 196/430 (45%), Gaps = 53/430 (12%)

Query: 144 GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
           G  F    QTL +  +     + +D S R  GD+ L  +AES+  N+    +    + + 
Sbjct: 2   GASFSTYDQTLRDIEENKGKHAELDYSNRALGDKRLQRMAESIHNNRRCFNLDSDPSCLD 61

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG---VERLQLSSVDLRD 260
            +              L  L+LS   I   GV+ LCD+L +  G   VE L L++  L  
Sbjct: 62  RS-------------TLCRLDLSNTNITGAGVRFLCDVLANGNGLLNVEALVLNNNALGP 108

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           +G + +   +K N  L+ ++LNN  +   G  ++A+ L EN ++ ++ + GN      A 
Sbjct: 109 DGGRFLGRAIKMNGSLKHIKLNNCALGDEGALAIAQGLQENLSVLTIEMAGNLLSDRTAQ 168

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           A+   L  N+ L  L L  NSI   G + L  GLS     L  L +G+N+I + G  H  
Sbjct: 169 AMGNMLAHNQHLEGLSLFQNSILAAGAKYLCDGLS-MNASLRWLSLGSNNIGSDGMLHFK 227

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVL 439
             + +  +L W+ L  N IGD G + +A+AL  ++  + ++ LGGNNI   G   I + L
Sbjct: 228 HALPHL-NLQWLALGGNSIGDAGLQHLAEALADEHCPLQSLGLGGNNISDIGMKDICKAL 286

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
             N+ + +L L  N                            +IG  G E +A ML  N 
Sbjct: 287 WSNTGLEALGLGGN----------------------------RIGVEGCEELAQMLTSNR 318

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK-----A 554
           ++  L L +N + DEG   +A+     NE L ++ +A N    DGA+ +AQ L+     A
Sbjct: 319 SLRRLVLSSNQIDDEGLMVIAEGL-CKNEHLHTLLIAANPFTMDGAWYLAQRLEKSKSFA 377

Query: 555 NEDVAVTSLN 564
           N D+ V  ++
Sbjct: 378 NHDLRVLDIH 387



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 18/288 (6%)

Query: 61  PEGGRRQRRVYRQSQS--DNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMPKPS 118
           P+GGR   R  + + S     L    +    +  +  G+  + + +  ++   LL     
Sbjct: 108 PDGGRFLGRAIKMNGSLKHIKLNNCALGDEGALAIAQGLQENLSVLTIEMAGNLL----- 162

Query: 119 RPSKPTAEGMNWSVGAGTNL--LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGD 176
             S  TA+ M   +    +L  LS F   +     + L +      +   + +   N G 
Sbjct: 163 --SDRTAQAMGNMLAHNQHLEGLSLFQNSILAAGAKYLCDGLSMNASLRWLSLGSNNIGS 220

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIGDEGV 235
           +G+     +L +    + ++   N I  AG++   + +   +  L++L L GN I D G+
Sbjct: 221 DGMLHFKHALPH-LNLQWLALGGNSIGDAGLQHLAEALADEHCPLQSLGLGGNNISDIGM 279

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K +C  L  N G+E L L    +  EG + +A++L +N  LR L L++N ID  G   +A
Sbjct: 280 KDICKALWSNTGLEALGLGGNRIGVEGCEELAQMLTSNRSLRRLVLSSNQIDDEGLMVIA 339

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS-----LRELHLH 338
           E L +N  + +L +  N     GA  LA+ LE +KS     LR L +H
Sbjct: 340 EGLCKNEHLHTLLIAANPFTMDGAWYLAQRLEKSKSFANHDLRVLDIH 387


>gi|156354305|ref|XP_001623338.1| predicted protein [Nematostella vectensis]
 gi|156210026|gb|EDO31238.1| predicted protein [Nematostella vectensis]
          Length = 376

 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 184/372 (49%), Gaps = 9/372 (2%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E   +  + + V +     G  G+  LA +L  N+T   +      +T+   +A   +
Sbjct: 9   LAEILSDNTSLTDVRIDRTILGSTGVTSLANALKVNKTVRTLGIDGGNMTSEAGRAIGEM 68

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  + +L L G  +GD G + +   L  N  + +L ++   +   G KAI ++++N 
Sbjct: 69  LRHNTTVTSLFLRGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIKAITKVIQN- 127

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSL 332
             +  L L++N + Y G  ++A  L+++ S ++ L L+       GA  LA  L  N  L
Sbjct: 128 --VTRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDEFGAKELAIALSRNSCL 185

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            EL +  N I DEG+ AL   ++S +  L VL I  N++       + E +++  ++  +
Sbjct: 186 EELSVACNDINDEGMCALAESVASNE-TLQVLYITYNNVGQNAGRAIGEMLRHNTTVTSL 244

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L    +GD GA  IA  L Q RTI  + +  ++I + G  AI +V+++   +T L+L+ 
Sbjct: 245 FLSGGRLGDSGARGIALGLAQKRTIAQLSIANSSIGTAGIKAITKVIQN---VTRLNLSG 301

Query: 453 NPIGADGAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           NP+G  G KA++ +L K    +  L L  C I   GA+ +A  L  N+ +  L +  N +
Sbjct: 302 NPVGYGGVKAIARLLVKSCCRLKFLFLDHCNIDVFGAKELAIALSRNSCLEELSVACNDI 361

Query: 512 RDEGAKCLAQSF 523
            DEG   LA+S 
Sbjct: 362 NDEGMCALAESV 373



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 160/329 (48%), Gaps = 37/329 (11%)

Query: 144 GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
           G +  E+ + + E  +     +S+ + G   GD G   +A  L  N T  ++S A + I 
Sbjct: 55  GNMTSEAGRAIGEMLRHNTTVTSLFLRGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIG 114

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD------------------- 244
            AGIKA   V+Q+   +  LNLS NP+G +GVK +  +LV                    
Sbjct: 115 TAGIKAITKVIQN---VTRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDEFG 171

Query: 245 ----------NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
                     N+ +E L ++  D+ DEG  A+AE + +N  L+VL +  N +  +   ++
Sbjct: 172 AKELAIALSRNSCLEELSVACNDINDEGMCALAESVASNETLQVLYITYNNVGQNAGRAI 231

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
            E L  N+T+ SL L+G   G  GA  +A GL   +++ +L +  +SIG  GI+A+   +
Sbjct: 232 GEMLRHNTTVTSLFLSGGRLGDSGARGIALGLAQKRTIAQLSIANSSIGTAGIKAITKVI 291

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
            +    +  L++  N +   G   +A   +K+C  L ++ L   +I   GA+++A AL +
Sbjct: 292 QN----VTRLNLSGNPVGYGGVKAIARLLVKSCCRLKFLFLDHCNIDVFGAKELAIALSR 347

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDN 442
           N  +  + +  N+I+ +G  A+A  +  N
Sbjct: 348 NSCLEELSVACNDINDEGMCALAESVASN 376



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 166/324 (51%), Gaps = 11/324 (3%)

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN-NMIDYS 289
           GD     L +IL DN  +  +++    L   G  ++A  LK N  +R L ++  NM   +
Sbjct: 2   GDSCAIKLAEILSDNTSLTDVRIDRTILGSTGVTSLANALKVNKTVRTLGIDGGNMTSEA 61

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++ E L  N+T+ SL L G   G  GA  +A GL  N ++ +L +  +SIG  GI+A
Sbjct: 62  G-RAIGEMLRHNTTVTSLFLRGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIKA 120

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYMNDIGDEGAEKIA 408
           +   + +    +  L++ +N +   G   +A   +K+C  L ++ L   +I + GA+++A
Sbjct: 121 ITKVIQN----VTRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDEFGAKELA 176

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            AL +N  +  + +  N+I+ +G  A+A  +  N  +  L + YN +G +  +A+ E+L+
Sbjct: 177 IALSRNSCLEELSVACNDINDEGMCALAESVASNETLQVLYITYNNVGQNAGRAIGEMLR 236

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
            +  + +L L   ++G SGA  +A  L    TI+ L +  + +   G K + +    V +
Sbjct: 237 HNTTVTSLFLSGGRLGDSGARGIALGLAQKRTIAQLSIANSSIGTAGIKAITK----VIQ 292

Query: 529 ALTSIDLAFNEIRDDGAFAIAQAL 552
            +T ++L+ N +   G  AIA+ L
Sbjct: 293 NVTRLNLSGNPVGYGGVKAIARLL 316



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 172/372 (46%), Gaps = 36/372 (9%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L  N +L  + +    +G  GV  L + L  N  V  L +   ++  E  +AI E+L++
Sbjct: 12  ILSDNTSLTDVRIDRTILGSTGVTSLANALKVNKTVRTLGIDGGNMTSEAGRAIGEMLRH 71

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ +  L L    +  SG   +A  L +N+TI  L +  +  G  G  A+ K ++   ++
Sbjct: 72  NTTVTSLFLRGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIKAITKVIQ---NV 128

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L+L  N +G +G++A+   L     +L  L + + +I   GA  +A  +     L  +
Sbjct: 129 TRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDEFGAKELAIALSRNSCLEEL 188

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS----- 447
           ++  NDI DEG   +A+++  N T+  + +  NN+      AI  +L+ N+ +TS     
Sbjct: 189 SVACNDINDEGMCALAESVASNETLQVLYITYNNVGQNAGRAIGEMLRHNTTVTSLFLSG 248

Query: 448 -----------------------LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
                                  L +A + IG  G KA+++V++   N+  L L    +G
Sbjct: 249 GRLGDSGARGIALGLAQKRTIAQLSIANSSIGTAGIKAITKVIQ---NVTRLNLSGNPVG 305

Query: 485 ASGAEFVADML-RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             G + +A +L +    +  L L    +   GAK LA +    N  L  + +A N+I D+
Sbjct: 306 YGGVKAIARLLVKSCCRLKFLFLDHCNIDVFGAKELAIALS-RNSCLEELSVACNDINDE 364

Query: 544 GAFAIAQALKAN 555
           G  A+A+++ +N
Sbjct: 365 GMCALAESVASN 376



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 33/214 (15%)

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +AE + +  SL  + +    +G  G   +A+ALK N+T+ T+ + G N+ S+   AI
Sbjct: 6   AIKLAEILSDNTSLTDVRIDRTILGSTGVTSLANALKVNKTVRTLGIDGGNMTSEAGRAI 65

Query: 436 ARVLKDNSVITS----------------------------LDLAYNPIGADGAKALSEVL 467
             +L+ N+ +TS                            L +A++ IG  G KA+++V+
Sbjct: 66  GEMLRHNTTVTSLFLRGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIKAITKVI 125

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADML-RYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
           +   N+  L L    +G  G + +A +L +  + +  L L    + + GAK LA +    
Sbjct: 126 Q---NVTRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDEFGAKELAIALS-R 181

Query: 527 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           N  L  + +A N+I D+G  A+A+++ +NE + V
Sbjct: 182 NSCLEELSVACNDINDEGMCALAESVASNETLQV 215


>gi|323363004|ref|NP_620805.2| ribonuclease inhibitor isoform b [Rattus norvegicus]
 gi|398303850|ref|NP_001257692.1| ribonuclease inhibitor isoform b [Rattus norvegicus]
 gi|47682903|gb|AAH70501.1| Ribonuclease/angiogenin inhibitor 1 [Rattus norvegicus]
 gi|149061559|gb|EDM11982.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Rattus
           norvegicus]
 gi|149061560|gb|EDM11983.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Rattus
           norvegicus]
 gi|308387037|dbj|BAJ22804.1| ribonuclease inhibitor [Rattus norvegicus]
          Length = 456

 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 183/377 (48%), Gaps = 7/377 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S     +T AG      VL+S   L
Sbjct: 52  ALTELSLRTNELGDAGVGLVLQGL-QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GDEG+K LC+ L D    +E+LQL   +L     + +A +L+     + L
Sbjct: 111 RELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN    +G  +L + L +++  + SL L      +     L   +    SL+EL L 
Sbjct: 171 VLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQELDLG 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL SGL     +L  L + +  ++A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNE 290

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA+ + ++ L+    + ++ +   ++ +        VL  N  +  L ++ NP+G 
Sbjct: 291 LKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGD 350

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            G   L + L +   +   L LG C +  SG   +A +L  N ++  LDL  N + D G 
Sbjct: 351 SGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMGDTGV 410

Query: 517 KCLAQSFKVVNEALTSI 533
             L +S K  + AL  +
Sbjct: 411 LQLLESLKQPSCALQQL 427



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 147/320 (45%), Gaps = 4/320 (1%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            L +  + L     + ++    GDEGL  L E L   Q   E++      +TA   +   
Sbjct: 99  VLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLA 158

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
            VL+     K L LS N   + G+  LC  L D+A  +E L+L +  +     K + +++
Sbjct: 159 SVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVV 218

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGN 329
            + + L+ L+L +N +  +G  +L   LL  S  +R+L L      A G   L + L   
Sbjct: 219 ASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAK 278

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +SL+EL L GN + DEG + L   L     +L  L +   S++A    H    +   +SL
Sbjct: 279 QSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSL 338

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             + +  N +GD G  ++  AL    T+   + LG  ++   G S++A VL  N  +  L
Sbjct: 339 FELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLREL 398

Query: 449 DLAYNPIGADGAKALSEVLK 468
           DL+ N +G  G   L E LK
Sbjct: 399 DLSNNCMGDTGVLQLLESLK 418



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 174/396 (43%), Gaps = 6/396 (1%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
            E L   Q  + V     G+T    K     +Q+N AL  L+L  N +GD GV  +   L
Sbjct: 16  TELLPLIQQYQVVRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGL 75

Query: 243 VD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
            +    +++L L +  L + G   + ++L++ S LR L LN+N +   G   L E L + 
Sbjct: 76  QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL L  N   + GI  L  GL     +
Sbjct: 136 QCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQ 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITT 419
           L  L + N  I++     + + + +  SL  ++L  N +G+ G   +   L   +  + T
Sbjct: 196 LESLKLENCGITSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRT 255

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + L   ++ ++G   + RVL+    +  L LA N +  +GA+ L E L   G  + +L +
Sbjct: 256 LWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWV 315

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
             C + A+       +L  N ++  L + +N L D G   L ++    +  L  + L   
Sbjct: 316 KTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDC 375

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           ++ D G  ++A  L AN   ++  L+L+NN +   G
Sbjct: 376 DVTDSGCSSLATVLLANR--SLRELDLSNNCMGDTG 409



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 14/177 (7%)

Query: 401 DEGAEKIADA--------LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           D   E+++DA        ++Q + +   D G   +  K    I   ++ N  +T L L  
Sbjct: 4   DIQCEQLSDARWTELLPLIQQYQVVRLDDCGLTEVRCKD---IRSAIQANPALTELSLRT 60

Query: 453 NPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           N +G  G   + + L+     I  L L  C +  +G   + D+LR  +T+  L L  N L
Sbjct: 61  NELGDAGVGLVLQGLQNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPL 120

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            DEG K L +  +     L  + L +  +       +A  L+   D     L L+NN
Sbjct: 121 GDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLASVLRVKPDFK--ELVLSNN 175


>gi|320164844|gb|EFW41743.1| hypothetical protein CAOG_06875 [Capsaspora owczarzaki ATCC 30864]
          Length = 217

 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 111/198 (56%), Gaps = 2/198 (1%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L+   IGD+  +A+   L      +  L +  N I A GA  +A+ +K   +L W+N
Sbjct: 19  ELSLNHELIGDDEAKAIAEALKVNT-TVTTLKMDENQIGAVGAHAIADALKVNTTLTWLN 77

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IG+ GA+ IA  LK N T+T + LG N I   GA AIA  L+ N+ +TSLDL  +
Sbjct: 78  LQENQIGNAGAQAIAATLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNTTLTSLDLGES 137

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           PIG  G  A++E LK +  +    L   QI  +GA+ +A  L+ N T++ L L  N   D
Sbjct: 138 PIGVAGVNAIAEALKVNTTLKKFGLWRSQIDDAGAQAIAATLKVNKTLTTLFLEENQFSD 197

Query: 514 EGAKCLAQSFKVVNEALT 531
            GA+ +A++ K VN ALT
Sbjct: 198 AGAQAIAEALK-VNTALT 214



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 107/182 (58%), Gaps = 1/182 (0%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +K   ++  + +  N IG  GA  IADALK N T+T ++L  N I + GA AIA  
Sbjct: 35  IAEALKVNTTVTTLKMDENQIGAVGAHAIADALKVNTTLTWLNLQENQIGNAGAQAIAAT 94

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK N+ +T L L  N IG  GA+A++E L+ +  + +L LG   IG +G   +A+ L+ N
Sbjct: 95  LKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNTTLTSLDLGESPIGVAGVNAIAEALKVN 154

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            T+    L  + + D GA+ +A + KV N+ LT++ L  N+  D GA AIA+ALK N  +
Sbjct: 155 TTLKKFGLWRSQIDDAGAQAIAATLKV-NKTLTTLFLEENQFSDAGAQAIAEALKVNTAL 213

Query: 559 AV 560
            V
Sbjct: 214 TV 215



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 114/202 (56%), Gaps = 4/202 (1%)

Query: 381 EYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +   N K   W ++L    IGD+ A+ IA+ALK N T+TT+ +  N I + GA AIA  L
Sbjct: 8   DLTHNVKFASWELSLNHELIGDDEAKAIAEALKVNTTVTTLKMDENQIGAVGAHAIADAL 67

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           K N+ +T L+L  N IG  GA+A++  LK +  +  L LG  QIG  GA+ +A+ LR N 
Sbjct: 68  KVNTTLTWLNLQENQIGNAGAQAIAATLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNT 127

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
           T++ LDL  + +   G   +A++ KV N  L    L  ++I D GA AIA  LK N+   
Sbjct: 128 TLTSLDLGESPIGVAGVNAIAEALKV-NTTLKKFGLWRSQIDDAGAQAIAATLKVNK--T 184

Query: 560 VTSLNLANNFLTKFGQSALTDA 581
           +T+L L  N  +  G  A+ +A
Sbjct: 185 LTTLFLEENQFSDAGAQAIAEA 206



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 117/226 (51%), Gaps = 29/226 (12%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L LN+ +I      ++AEAL  N+T+ +L ++ N  GA+GA+A+A  L+ N +L  L+L 
Sbjct: 20  LSLNHELIGDDEAKAIAEALKVNTTVTTLKMDENQIGAVGAHAIADALKVNTTLTWLNLQ 79

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IG+ G +A                             +A  +K   +L  ++L  N 
Sbjct: 80  ENQIGNAGAQA-----------------------------IAATLKVNTTLTELSLGQNQ 110

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IG  GA+ IA+ L+ N T+T++DLG + I   G +AIA  LK N+ +    L  + I   
Sbjct: 111 IGQVGAQAIAEGLRVNTTLTSLDLGESPIGVAGVNAIAEALKVNTTLKKFGLWRSQIDDA 170

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           GA+A++  LK +  + TL L   Q   +GA+ +A+ L+ N  +++L
Sbjct: 171 GAQAIAATLKVNKTLTTLFLEENQFSDAGAQAIAEALKVNTALTVL 216



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 107/226 (47%), Gaps = 29/226 (12%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L+   IGD+  K + + L  N  V  L++    +   GA AIA+ LK N+ L  L L 
Sbjct: 20  LSLNHELIGDDEAKAIAEALKVNTTVTTLKMDENQIGAVGAHAIADALKVNTTLTWLNLQ 79

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  ++A  L  N+T+  L L  N  G +GA A+A+GL  N +L  L L  + I
Sbjct: 80  ENQIGNAGAQAIAATLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNTTLTSLDLGESPI 139

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           G  G+ A                             +AE +K   +L    L+ + I D 
Sbjct: 140 GVAGVNA-----------------------------IAEALKVNTTLKKFGLWRSQIDDA 170

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           GA+ IA  LK N+T+TT+ L  N     GA AIA  LK N+ +T L
Sbjct: 171 GAQAIAATLKVNKTLTTLFLEENQFSDAGAQAIAEALKVNTALTVL 216



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 3/205 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRN--FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           Q L +    ++ F+S ++S  +   GD+    +AE+L  N T   +    N I A G  A
Sbjct: 4   QILRDLTHNVK-FASWELSLNHELIGDDEAKAIAEALKVNTTVTTLKMDENQIGAVGAHA 62

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
               L+ N  L  LNL  N IG+ G + +   L  N  +  L L    +   GA+AIAE 
Sbjct: 63  IADALKVNTTLTWLNLQENQIGNAGAQAIAATLKVNTTLTELSLGQNQIGQVGAQAIAEG 122

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           L+ N+ L  L+L  + I  +G  ++AEAL  N+T++   L  +     GA A+A  L+ N
Sbjct: 123 LRVNTTLTSLDLGESPIGVAGVNAIAEALKVNTTLKKFGLWRSQIDDAGAQAIAATLKVN 182

Query: 330 KSLRELHLHGNSIGDEGIRALMSGL 354
           K+L  L L  N   D G +A+   L
Sbjct: 183 KTLTTLFLEENQFSDAGAQAIAEAL 207



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 88/177 (49%), Gaps = 1/177 (0%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           KA    L+ N  + TL +  N IG  G   + D L  N  +  L L    + + GA+AIA
Sbjct: 33  KAIAEALKVNTTVTTLKMDENQIGAVGAHAIADALKVNTTLTWLNLQENQIGNAGAQAIA 92

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             LK N+ L  L L  N I   G  ++AE L  N+T+ SL L  +  G  G NA+A+ L+
Sbjct: 93  ATLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNTTLTSLDLGESPIGVAGVNAIAEALK 152

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            N +L++  L  + I D G +A+ + L   K  L  L +  N  S  GA  +AE +K
Sbjct: 153 VNTTLKKFGLWRSQIDDAGAQAIAATLKVNK-TLTTLFLEENQFSDAGAQAIAEALK 208



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 81/172 (47%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++ M     G  G   +A++L  N T   ++   N I  AG +A    L+ N  L  L
Sbjct: 45  VTTLKMDENQIGAVGAHAIADALKVNTTLTWLNLQENQIGNAGAQAIAATLKVNTTLTEL 104

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N IG  G + + + L  N  +  L L    +   G  AIAE LK N+ L+   L  
Sbjct: 105 SLGQNQIGQVGAQAIAEGLRVNTTLTSLDLGESPIGVAGVNAIAEALKVNTTLKKFGLWR 164

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + ID +G  ++A  L  N T+ +L L  N     GA A+A+ L+ N +L  L
Sbjct: 165 SQIDDAGAQAIAATLKVNKTLTTLFLEENQFSDAGAQAIAEALKVNTALTVL 216


>gi|444519156|gb|ELV12618.1| Ribonuclease inhibitor [Tupaia chinensis]
          Length = 455

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 10/420 (2%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+   +  D       E L   Q    V     G+T A  K     LQ+N  L  L+L
Sbjct: 2   SLDIQCEHLSD---TRWTELLPLIQQYSVVRLDDCGLTEAHCKDICPALQANSGLTELSL 58

Query: 226 SGNPIGDEGVK-CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV   L  +      V++L L +  L + G   +   L+    LR L LN+N
Sbjct: 59  RTNELGDAGVHLVLQGLQSPTCKVQKLSLQNCCLTEAGCAVLPAALRRMPTLRELHLNDN 118

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E LL+    +  L L      A    ALA  L      +EL +  N IG
Sbjct: 119 PLGDAGLRLLCEGLLDPQCHLEKLQLEYCNLTAASCEALAAVLWAKPGFKELMVSNNGIG 178

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L  L + N  ++      +   +    SL  ++L  ND+GD G
Sbjct: 179 EAGVRVLCQGLRDSACQLETLKLENCGVTPANCKDLCGIVAE-ASLQEVDLGSNDLGDAG 237

Query: 404 -AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            AE     L+ +  + T+ L    I ++G   + +VL+    +  L LA N +G +GA+ 
Sbjct: 238 IAELCPGLLRPSSRVKTLWLWECGITAEGCRHLCQVLRAKGSLKELSLAGNELGDEGARL 297

Query: 463 LSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           L E +L     + +L +  C + A+     + +L  N ++  L + +N L D G + L Q
Sbjct: 298 LCESLLDPACQLQSLWVKSCCLTATCCPHFSSVLAQNKSLQELQISSNKLGDAGVQQLCQ 357

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
                +  L  + L   E+ DDG   +A  L A+   ++  L+L+NN +   G   L ++
Sbjct: 358 GLSQPSSTLRVLWLGDCEVSDDGCSTLASVLLASR--SLRELDLSNNCMGDLGIQQLIES 415



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 180/387 (46%), Gaps = 9/387 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + + +     GD G+  + + L       +++S     +T AG       L+    L+ 
Sbjct: 53  LTELSLRTNELGDAGVHLVLQGLQSPTCKVQKLSLQNCCLTEAGCAVLPAALRRMPTLRE 112

Query: 223 LNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+L+ NP+GD G++ LC+ L+D    +E+LQL   +L     +A+A +L      + L +
Sbjct: 113 LHLNDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCNLTAASCEALAAVLWAKPGFKELMV 172

Query: 282 NNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           +NN I  +G   L + L +++  + +L L  N G          G+    SL+E+ L  N
Sbjct: 173 SNNGIGEAGVRVLCQGLRDSACQLETLKLE-NCGVTPANCKDLCGIVAEASLQEVDLGSN 231

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD GI  L  GL     ++  L +    I+A+G  H+ + ++   SL  ++L  N++G
Sbjct: 232 DLGDAGIAELCPGLLRPSSRVKTLWLWECGITAEGCRHLCQVLRAKGSLKELSLAGNELG 291

Query: 401 DEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           DEGA  + ++L      + ++ +    + +      + VL  N  +  L ++ N +G  G
Sbjct: 292 DEGARLLCESLLDPACQLQSLWVKSCCLTATCCPHFSSVLAQNKSLQELQISSNKLGDAG 351

Query: 460 AKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
            + L + L +    +  L LG C++   G   +A +L  + ++  LDL  N + D G + 
Sbjct: 352 VQQLCQGLSQPSSTLRVLWLGDCEVSDDGCSTLASVLLASRSLRELDLSNNCMGDLGIQQ 411

Query: 519 LAQSFK---VVNEALTSIDLAFNEIRD 542
           L +S +      E L   D+ + E  D
Sbjct: 412 LIESLRQPGCALEQLVLYDIYWTEEMD 438



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 79/188 (42%), Gaps = 14/188 (7%)

Query: 113 LMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGR 172
           L P   RPS        W  G         T +  R   Q L        +   + ++G 
Sbjct: 241 LCPGLLRPSSRVKTLWLWECG--------ITAEGCRHLCQVLRAKG----SLKELSLAGN 288

Query: 173 NFGDEGLFFLAES-LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
             GDEG   L ES L      + +   +  +TA     F  VL  N +L+ L +S N +G
Sbjct: 289 ELGDEGARLLCESLLDPACQLQSLWVKSCCLTATCCPHFSSVLAQNKSLQELQISSNKLG 348

Query: 232 DEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           D GV+ LC  L   +   R L L   ++ D+G   +A +L  +  LR L+L+NN +   G
Sbjct: 349 DAGVQQLCQGLSQPSSTLRVLWLGDCEVSDDGCSTLASVLLASRSLRELDLSNNCMGDLG 408

Query: 291 FTSLAEAL 298
              L E+L
Sbjct: 409 IQQLIESL 416


>gi|428182042|gb|EKX50904.1| hypothetical protein GUITHDRAFT_103488 [Guillardia theta CCMP2712]
          Length = 591

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 192/408 (47%), Gaps = 25/408 (6%)

Query: 187 GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
           G+N   + +    N I   G+K    +L S + L+TLNL+ N IG  G K L +IL + +
Sbjct: 87  GWN-LVKSLDLEGNYIGTTGVKDLSCLLSSCVFLETLNLNENAIGSGGAKILAEILPNLS 145

Query: 247 GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
            +  L++ S  + DEG   +   L   + L +L+L +N +   G   L+  L ENS++  
Sbjct: 146 RLVELRMQSNYIHDEGLIVLTSALDRCNNLTLLDLADNDLGPVGMEFLSSKLAENSSLTH 205

Query: 307 LHLNGNYGGALGANALAKGL--EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           L L+ N  G  GA  LA  L      S++ L L GN I  EG       L++    L  L
Sbjct: 206 LDLSNNAIGDEGATRLAANLFVSTKLSIKALSLRGNGITSEGAAR----LAAALPPLGQL 261

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+G NSI A+GA  +A  I+   ++  ++L  N +G+EG   I   L Q   +  +DL  
Sbjct: 262 DLGKNSIGAEGAGLIASSIRMWPAISSLDLSANLLGEEGLSLIVSVLPQCSQLQELDLSC 321

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N+     AS +A V+   + ++ + L+   IG++G   L+  L  +  +  L+L   QIG
Sbjct: 322 NSFGDHTASLLASVIPHCACLSKVSLSNTLIGSEGTGFLASSLPHYSVLRELRLNDNQIG 381

Query: 485 ASGAEFVADMLRYNNTISILDLRA-------NGLRDEG----AKCLAQSFKVVNEALTSI 533
             G   +A  L     +  LDL         N + DEG    +  LA   +     L S+
Sbjct: 382 CEGIYLLASTLPQCGRLVSLDLSKNQIALGWNDISDEGIGFLSAVLASCLR-----LKSL 436

Query: 534 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            L  N I ++G   +A +L +  +  + +LNL++N L   G   L D 
Sbjct: 437 SLECNHIEEEGCSLLAVSLPSCSN--LNTLNLSSNDLESNGVIVLADV 482



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 176/393 (44%), Gaps = 20/393 (5%)

Query: 141 GFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQ--TAEEVSFA 198
           G  G  F  SK   N       + + +D+S    GDEG   LA +L  +   + + +S  
Sbjct: 186 GPVGMEFLSSKLAENS------SLTHLDLSNNAIGDEGATRLAANLFVSTKLSIKALSLR 239

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            NGIT+ G         +   L  L+L  N IG EG   +   +     +  L LS+  L
Sbjct: 240 GNGITSEGAARLA---AALPPLGQLDLGKNSIGAEGAGLIASSIRMWPAISSLDLSANLL 296

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            +EG   I  +L   S L+ L+L+ N       + LA  +   + +  + L+    G+ G
Sbjct: 297 GEEGLSLIVSVLPQCSQLQELDLSCNSFGDHTASLLASVIPHCACLSKVSLSNTLIGSEG 356

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI-------GNNSI 371
              LA  L     LREL L+ N IG EGI  L S L  + G+L  LD+       G N I
Sbjct: 357 TGFLASSLPHYSVLRELRLNDNQIGCEGIYLLASTLP-QCGRLVSLDLSKNQIALGWNDI 415

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           S +G   ++  + +C  L  ++L  N I +EG   +A +L     + T++L  N++ S G
Sbjct: 416 SDEGIGFLSAVLASCLRLKSLSLECNHIEEEGCSLLAVSLPSCSNLNTLNLSSNDLESNG 475

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
              +A VL     +T L L+   IG+ GA  L+  L     ++ L L   +IG +GA   
Sbjct: 476 VIVLADVLSKCESLTHLSLSNCKIGSKGATGLAHTLP-RCKVSFLDLQENKIGVAGAATF 534

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           A +L   + +S   +  N L DEG   L  + K
Sbjct: 535 ASVLPRCSHLSHFRVGRNNLGDEGESFLLGAVK 567



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 149/331 (45%), Gaps = 23/331 (6%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+   + G EG   +A S+        +  +AN +   G+     VL     L+ L+LS
Sbjct: 261 LDLGKNSIGAEGAGLIASSIRMWPAISSLDLSANLLGEEGLSLIVSVLPQCSQLQELDLS 320

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N  GD     L  ++   A + ++ LS+  +  EG   +A  L + S+LR L LN+N I
Sbjct: 321 CNSFGDHTASLLASVIPHCACLSKVSLSNTLIGSEGTGFLASSLPHYSVLRELRLNDNQI 380

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   LA  L +   + SL L+ N                     ++ L  N I DEG
Sbjct: 381 GCEGIYLLASTLPQCGRLVSLDLSKN---------------------QIALGWNDISDEG 419

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           I  L + L+S   +L  L +  N I  +G   +A  + +C +L  +NL  ND+   G   
Sbjct: 420 IGFLSAVLASCL-RLKSLSLECNHIEEEGCSLLAVSLPSCSNLNTLNLSSNDLESNGVIV 478

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           +AD L +  ++T + L    I SKGA+ +A  L    V + LDL  N IG  GA   + V
Sbjct: 479 LADVLSKCESLTHLSLSNCKIGSKGATGLAHTLPRCKV-SFLDLQENKIGVAGAATFASV 537

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           L    +++  ++G   +G  G  F+   ++Y
Sbjct: 538 LPRCSHLSHFRVGRNNLGDEGESFLLGAVKY 568



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 175/410 (42%), Gaps = 15/410 (3%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E    L     + M      DEGL  L  +L        +  A N +   G++   
Sbjct: 135 KILAEILPNLSRLVELRMQSNYIHDEGLIVLTSALDRCNNLTLLDLADNDLGPVGMEFLS 194

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG--AKAIAEL 269
             L  N +L  L+LS N IGDEG   L   L  +    +L + ++ LR  G  ++  A L
Sbjct: 195 SKLAENSSLTHLDLSNNAIGDEGATRLAANLFVST---KLSIKALSLRGNGITSEGAARL 251

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
                 L  L+L  N I   G   +A ++     I SL L+ N  G  G + +   L   
Sbjct: 252 AAALPPLGQLDLGKNSIGAEGAGLIASSIRMWPAISSLDLSANLLGEEGLSLIVSVLPQC 311

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             L+EL L  NS GD    +L++ +      L+ + + N  I ++G   +A  + +   L
Sbjct: 312 SQLQELDLSCNSFGDH-TASLLASVIPHCACLSKVSLSNTLIGSEGTGFLASSLPHYSVL 370

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDL-------GGNNIHSKGASAIARVLKDN 442
             + L  N IG EG   +A  L Q   + ++DL       G N+I  +G   ++ VL   
Sbjct: 371 RELRLNDNQIGCEGIYLLASTLPQCGRLVSLDLSKNQIALGWNDISDEGIGFLSAVLASC 430

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             + SL L  N I  +G   L+  L    N+NTL L    + ++G   +AD+L    +++
Sbjct: 431 LRLKSLSLECNHIEEEGCSLLAVSLPSCSNLNTLNLSSNDLESNGVIVLADVLSKCESLT 490

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
            L L    +  +GA  LA +       ++ +DL  N+I   GA   A  L
Sbjct: 491 HLSLSNCKIGSKGATGLAHTLPRCK--VSFLDLQENKIGVAGAATFASVL 538



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 126/277 (45%), Gaps = 31/277 (11%)

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           G +G   ++ L L GN IG  G++ L   LSS    L  L++  N+I + GA  +AE + 
Sbjct: 84  GRDGWNLVKSLDLEGNYIGTTGVKDLSCLLSSCV-FLETLNLNENAIGSGGAKILAEILP 142

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           N   L+ + +  N I DEG   +  AL +   +T +DL  N++   G   ++  L +NS 
Sbjct: 143 NLSRLVELRMQSNYIHDEGLIVLTSALDRCNNLTLLDLADNDLGPVGMEFLSSKLAENSS 202

Query: 445 ITSLDLAYNPIGADGAKALS-----------EVLKFHGNINT----------------LK 477
           +T LDL+ N IG +GA  L+           + L   GN  T                L 
Sbjct: 203 LTHLDLSNNAIGDEGATRLAANLFVSTKLSIKALSLRGNGITSEGAARLAAALPPLGQLD 262

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           LG   IGA GA  +A  +R    IS LDL AN L +EG   +       ++ L  +DL+ 
Sbjct: 263 LGKNSIGAEGAGLIASSIRMWPAISSLDLSANLLGEEGLSLIVSVLPQCSQ-LQELDLSC 321

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           N   D  A  +A  +       ++ ++L+N  +   G
Sbjct: 322 NSFGDHTASLLASVIP--HCACLSKVSLSNTLIGSEG 356


>gi|77416905|sp|P29315.2|RINI_RAT RecName: Full=Ribonuclease inhibitor; AltName:
           Full=Ribonuclease/angiogenin inhibitor 1
          Length = 456

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 191/397 (48%), Gaps = 10/397 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S     +T AG      VL+S   L
Sbjct: 52  ALTELSLRTNELGDAGVGLVLQGL-QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GDEG+K LC+ L D    +E+LQL   +L     + +A +L+     + L
Sbjct: 111 RELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN    +G  +L + L +++  + SL L      +     L   +    SL+EL L 
Sbjct: 171 VLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQELDLG 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL SGL     +L  L + +  ++A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNE 290

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA+ + ++ L+    + ++ +   ++ +        VL  N  +  L ++ NP+G 
Sbjct: 291 LKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGD 350

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            G   L + L +   +   L LG C +  SG   +A +L  N ++  LDL  N + D G 
Sbjct: 351 SGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMGDNGV 410

Query: 517 KCLAQSFK---VVNEALTSIDLAFNEIRDDGAFAIAQ 550
             L +S K    + + L   D+ + +  +D   A+ +
Sbjct: 411 LQLLESLKQPSCILQQLVLYDIYWTDEVEDQLRALEE 447



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 148/320 (46%), Gaps = 4/320 (1%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFD 211
            L +  + L     + ++    GDEGL  L E L   Q   E++      +TA   +   
Sbjct: 99  VLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLA 158

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
            VL+     K L LS N   + G+  LC  L D+A  +E L+L +  +     K + +++
Sbjct: 159 SVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVV 218

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGN 329
            + + L+ L+L +N +  +G  +L   LL  S  +R+L L      A G   L + L   
Sbjct: 219 ASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAK 278

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +SL+EL L GN + DEG + L   L     +L  L +   S++A    H    +   +SL
Sbjct: 279 QSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSL 338

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             + +  N +GD G  ++  AL    T+   + LG  ++   G S++A VL  N  +  L
Sbjct: 339 FELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLREL 398

Query: 449 DLAYNPIGADGAKALSEVLK 468
           DL+ N +G +G   L E LK
Sbjct: 399 DLSNNCMGDNGVLQLLESLK 418



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 173/392 (44%), Gaps = 6/392 (1%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
            E L   Q  + V     G+T    K     +Q+N AL  L+L  N +GD GV  +   L
Sbjct: 16  TELLPLIQQYQVVRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGL 75

Query: 243 VD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
            +    +++L L +  L + G   + ++L++ S LR L LN+N +   G   L E L + 
Sbjct: 76  QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL L  N   + GI  L  GL     +
Sbjct: 136 QCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQ 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITT 419
           L  L + N  I++     + + + +  SL  ++L  N +G+ G   +   L   +  + T
Sbjct: 196 LESLKLENCGITSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRT 255

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + L   ++ ++G   + RVL+    +  L LA N +  +GA+ L E L   G  + +L +
Sbjct: 256 LWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWV 315

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
             C + A+       +L  N ++  L + +N L D G   L ++    +  L  + L   
Sbjct: 316 KTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDC 375

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           ++ D G  ++A  L AN   ++  L+L+NN +
Sbjct: 376 DVTDSGCSSLATVLLANR--SLRELDLSNNCM 405



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 5/154 (3%)

Query: 156 EFAKELRAFSSV---DMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFD 211
           +  + LRA  S+    ++G    DEG   L ESL       E +      +TAA    F 
Sbjct: 270 DLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFC 329

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELL 270
            VL  N +L  L +S NP+GD GV  LC  L     V R L L   D+ D G  ++A +L
Sbjct: 330 SVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVL 389

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
             N  LR L+L+NN +  +G   L E+L + S I
Sbjct: 390 LANRSLRELDLSNNCMGDNGVLQLLESLKQPSCI 423



 Score = 42.7 bits (99), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 14/177 (7%)

Query: 401 DEGAEKIADA--------LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           D   E+++DA        ++Q + +   D G   +  K    I   ++ N  +T L L  
Sbjct: 4   DIQCEQLSDARWTELLPLIQQYQVVRLDDCGLTEVRCKD---IRSAIQANPALTELSLRT 60

Query: 453 NPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           N +G  G   + + L+     I  L L  C +  +G   + D+LR  +T+  L L  N L
Sbjct: 61  NELGDAGVGLVLQGLQNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPL 120

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            DEG K L +  +     L  + L +  +       +A  L+   D     L L+NN
Sbjct: 121 GDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLASVLRVKPDFK--ELVLSNN 175


>gi|51850103|dbj|BAD42392.1| leucine-rich repeat protein [Ralstonia solanacearum]
          Length = 621

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 125/381 (32%), Positives = 191/381 (50%), Gaps = 65/381 (17%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+++     GD+G    A +L  +QT   +    NGI  AG  AF     +N  L+ LNL
Sbjct: 264 SLNLYSNEIGDDG----ARALATSQTLTSLELRRNGIGNAGAGAF----ANNTVLRKLNL 315

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           + N I   G +    +L  N  +  L L    L D+GA+A+A    N S+L  L++++N 
Sbjct: 316 ANNMIDKRGAR----VLAGNTSLTELDLGGNRLGDKGARALA---GNRSLLS-LKVDHNE 367

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGA-------------------LGANAL-AKG 325
           I   G     +AL +++T+RSL L+ N+ G                     G N+  A  
Sbjct: 368 ISDEGV----QALAQHATLRSLDLSFNFVGLQGAGALGGNTRLSELNLSLCGINSYSASA 423

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L  NKSL  L+L+GN IGD+G RAL     ++   L +LD+  N+I   GA    E +  
Sbjct: 424 LARNKSLASLYLNGNRIGDDGARAL-----AKNSTLTLLDLSRNNIQNAGA----EALGG 474

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            ++L+ + L  N I D+GA     AL ++  +TT+DL  N I S+GA    R L  ++ +
Sbjct: 475 NQALISLKLAGNGIDDDGAA----ALARHPRLTTLDLSQNRIGSEGA----RHLAQSATL 526

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
             LDL+ N IG +GAKALS        + TLK+    IG  GA  +AD    + +++ LD
Sbjct: 527 AELDLSENRIGPEGAKALS----LSTVLTTLKVIDNAIGEDGARALAD----STSLTSLD 578

Query: 506 LRANGLRDEGAKCLAQSFKVV 526
            R NG+ + GA+ L  + ++ 
Sbjct: 579 ARRNGIGEAGAQVLEANTRIT 599



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 210/459 (45%), Gaps = 101/459 (22%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S++++G   G EG    A +L  +++   +S    GI     +A    L ++ ++++L
Sbjct: 191 LKSLNLNGIEIGVEG----ARTLATSKSLVSLSLIGCGIGDRAAQA----LAASRSIRSL 242

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N IG +G + L D     A +  L L S ++ D+GA+A+A     +  L  LEL  
Sbjct: 243 DLSVNMIGCDGAQALAD-----APLVSLNLYSNEIGDDGARALA----TSQTLTSLELRR 293

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G    A A   N+ +R L+L  N     GA  LA    GN SL EL L GN +G
Sbjct: 294 NGIGNAG----AGAFANNTVLRKLNLANNMIDKRGARVLA----GNTSLTELDLGGNRLG 345

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY--------------------- 382
           D+G RAL    S     L  L + +N IS +G   +A++                     
Sbjct: 346 DKGARALAGNRS-----LLSLKVDHNEISDEGVQALAQHATLRSLDLSFNFVGLQGAGAL 400

Query: 383 -----------------------IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
                                  +   KSL  + L  N IGD+GA     AL +N T+T 
Sbjct: 401 GGNTRLSELNLSLCGINSYSASALARNKSLASLYLNGNRIGDDGAR----ALAKNSTLTL 456

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +DL  NNI + GA A    L  N  + SL LA N I  DGA AL+     H  + TL L 
Sbjct: 457 LDLSRNNIQNAGAEA----LGGNQALISLKLAGNGIDDDGAAALAR----HPRLTTLDLS 508

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
             +IG+ GA  +A     + T++ LDL  N +  EGAK L+     ++  LT++ +  N 
Sbjct: 509 QNRIGSEGARHLAQ----SATLAELDLSENRIGPEGAKALS-----LSTVLTTLKVIDNA 559

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           I +DGA A+A      +  ++TSL+   N + + G   L
Sbjct: 560 IGEDGARALA------DSTSLTSLDARRNGIGEAGAQVL 592


>gi|354495357|ref|XP_003509797.1| PREDICTED: ribonuclease inhibitor-like [Cricetulus griseus]
 gi|344249425|gb|EGW05529.1| Ribonuclease inhibitor [Cricetulus griseus]
          Length = 456

 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 193/397 (48%), Gaps = 10/397 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
             + + +     GD G+  + + L  N T   +++S     +T AG +    VL+S   L
Sbjct: 52  TLTELSLCTNELGDPGVCLVLQGL-QNPTCKIQKLSLQNCSLTEAGCRVLPDVLRSLPTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+LS NP+GD G+K LC+ L+D    +E+LQL   +L     + +A + +     + +
Sbjct: 111 RELHLSDNPLGDAGLKLLCEGLLDPQCRLEKLQLEYCNLTATSCEPLASVFRVKPNFKEI 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN +  +G   L + L +++  + SL L      +     L   +    SL++L L 
Sbjct: 171 VLSNNDLHEAGVQMLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQQLDLG 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL SGL     ++  L +    I+A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNAGIAALCSGLLLPSCRIRTLWLWECDITAEGCKDLCRVLRTKQSLKELSLAGNE 290

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA+ + ++ L+    + ++ +   ++ +   S I  VL  N  +  L ++ NP+G 
Sbjct: 291 LRDEGAQLLCESLLEPGCQLESLWIKTCSLTAACCSHICSVLTKNRSLLELQMSSNPLGD 350

Query: 458 DGAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            G   L + L +    +  L LG C +  +G   +A +L +N ++  LDL  N + D G 
Sbjct: 351 LGVLELCKALGQPDTVLRVLWLGDCDVTDNGCSSLATVLLHNRSLRELDLSNNCMGDSGV 410

Query: 517 KCLAQSFKVVNEALTSI---DLAFNEIRDDGAFAIAQ 550
             L +S +  + AL  +   D+ + E  +D   A+ +
Sbjct: 411 LRLVESVRQPSCALQQLVLYDIYWTEEVEDQLRALEE 447



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 151/321 (47%), Gaps = 4/321 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAF 210
           + L +  + L     + +S    GD GL  L E L   Q   E++      +TA   +  
Sbjct: 98  RVLPDVLRSLPTLRELHLSDNPLGDAGLKLLCEGLLDPQCRLEKLQLEYCNLTATSCEPL 157

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAEL 269
             V +     K + LS N + + GV+ LC  L D+A  +E L+L +  +     K + ++
Sbjct: 158 ASVFRVKPNFKEIVLSNNDLHEAGVQMLCQGLKDSACQLESLKLENCGITSANCKDLCDV 217

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEG 328
           + + + L+ L+L +N +  +G  +L   LL  S  IR+L L      A G   L + L  
Sbjct: 218 VASKASLQQLDLGSNKLGNAGIAALCSGLLLPSCRIRTLWLWECDITAEGCKDLCRVLRT 277

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            +SL+EL L GN + DEG + L   L     +L  L I   S++A    H+   +   +S
Sbjct: 278 KQSLKELSLAGNELRDEGAQLLCESLLEPGCQLESLWIKTCSLTAACCSHICSVLTKNRS 337

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITS 447
           LL + +  N +GD G  ++  AL Q  T+   + LG  ++   G S++A VL  N  +  
Sbjct: 338 LLELQMSSNPLGDLGVLELCKALGQPDTVLRVLWLGDCDVTDNGCSSLATVLLHNRSLRE 397

Query: 448 LDLAYNPIGADGAKALSEVLK 468
           LDL+ N +G  G   L E ++
Sbjct: 398 LDLSNNCMGDSGVLRLVESVR 418



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 183/416 (43%), Gaps = 15/416 (3%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+      D       E L   Q  + V     G+T    K     +QSN  L  L+L
Sbjct: 2   SLDIQCEQLSD---ARWTELLPLIQQYQVVRLDDCGLTEVRCKDISSAIQSNPTLTELSL 58

Query: 226 SGNPIGDEGVKCLCDILV----DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
             N +GD GV   C +L         +++L L +  L + G + + ++L++   LR L L
Sbjct: 59  CTNELGDPGV---CLVLQGLQNPTCKIQKLSLQNCSLTEAGCRVLPDVLRSLPTLRELHL 115

Query: 282 NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           ++N +  +G   L E LL+    +  L L      A     LA       + +E+ L  N
Sbjct: 116 SDNPLGDAGLKLLCEGLLDPQCRLEKLQLEYCNLTATSCEPLASVFRVKPNFKEIVLSNN 175

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            + + G++ L  GL     +L  L + N  I++     + + + +  SL  ++L  N +G
Sbjct: 176 DLHEAGVQMLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQQLDLGSNKLG 235

Query: 401 DEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           + G   +    L  +  I T+ L   +I ++G   + RVL+    +  L LA N +  +G
Sbjct: 236 NAGIAALCSGLLLPSCRIRTLWLWECDITAEGCKDLCRVLRTKQSLKELSLAGNELRDEG 295

Query: 460 AKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           A+ L E L   G  + +L +  C + A+    +  +L  N ++  L + +N L D G   
Sbjct: 296 AQLLCESLLEPGCQLESLWIKTCSLTAACCSHICSVLTKNRSLLELQMSSNPLGDLGVLE 355

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           L ++    +  L  + L   ++ D+G  ++A  L  N   ++  L+L+NN +   G
Sbjct: 356 LCKALGQPDTVLRVLWLGDCDVTDNGCSSLATVLLHNR--SLRELDLSNNCMGDSG 409


>gi|320165463|gb|EFW42362.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 285

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/190 (41%), Positives = 113/190 (59%), Gaps = 1/190 (0%)

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA  +AE +K    L  + L MNDIGD GA+ IA+ LK N T+T++DL  N+I 
Sbjct: 48  NQIREVGARAIAETLKVNTRLTVLTLRMNDIGDVGAQAIAELLKTNTTLTSLDLRENHIC 107

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA AIA  LK N+ +T L   +N IG  GA+A+S  LK +  + +L L   +IG + A
Sbjct: 108 DAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQAISAALKVNTTLTSLDLSVNRIGDAEA 167

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           + +A+ L+ N T+  L+L  N + D GA  +A++ K VN  L ++ LA NEI +    +I
Sbjct: 168 QAIAEALKVNTTLIWLNLSFNQIGDTGALAIAEALK-VNTKLITLRLAHNEIGNAAVPSI 226

Query: 549 AQALKANEDV 558
            QALK N+ +
Sbjct: 227 VQALKMNKKI 236



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 107/201 (53%), Gaps = 1/201 (0%)

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  V  + L    +R+ GA+AIAE LK N+ L VL L  N I   G  ++AE L  N+T+
Sbjct: 37  NTTVTMINLLFNQIREVGARAIAETLKVNTRLTVLTLRMNDIGDVGAQAIAELLKTNTTL 96

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            SL L  N+    GA A+A+ L+ N +L  L    N IGD G +A+ + L      L  L
Sbjct: 97  TSLDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQAISAALKVNT-TLTSL 155

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+  N I    A  +AE +K   +L+W+NL  N IGD GA  IA+ALK N  + T+ L  
Sbjct: 156 DLSVNRIGDAEAQAIAEALKVNTTLIWLNLSFNQIGDTGALAIAEALKVNTKLITLRLAH 215

Query: 425 NNIHSKGASAIARVLKDNSVI 445
           N I +    +I + LK N  I
Sbjct: 216 NEIGNAAVPSIVQALKMNKKI 236



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 110/199 (55%), Gaps = 31/199 (15%)

Query: 398 DIGDEGAEKIADALKQNRTITTID----------------------------LGGNNIHS 429
           +IGD  A  +A+ALK N T+T I+                            L  N+I  
Sbjct: 21  EIGDAEALAVAEALKVNTTVTMINLLFNQIREVGARAIAETLKVNTRLTVLTLRMNDIGD 80

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA AIA +LK N+ +TSLDL  N I   GA+A++E LK + N+  L  GW  IG +GA+
Sbjct: 81  VGAQAIAELLKTNTTLTSLDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQ 140

Query: 490 FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
            ++  L+ N T++ LDL  N + D  A+ +A++ K VN  L  ++L+FN+I D GA AIA
Sbjct: 141 AISAALKVNTTLTSLDLSVNRIGDAEAQAIAEALK-VNTTLIWLNLSFNQIGDTGALAIA 199

Query: 550 QALKANEDVAVTSLNLANN 568
           +ALK N    + +L LA+N
Sbjct: 200 EALKVN--TKLITLRLAHN 216



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 112/247 (45%), Gaps = 29/247 (11%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD     +AE+L  N T   ++   N I   G +A    L+ N  L  L L  N IGD 
Sbjct: 22  IGDAEALAVAEALKVNTTVTMINLLFNQIREVGARAIAETLKVNTRLTVLTLRMNDIGDV 81

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + ++L  N  +  L L    + D GA+AIAE LK N+ L +L    N I  +G  +
Sbjct: 82  GAQAIAELLKTNTTLTSLDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQA 141

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           ++ AL  N+T+ SL L+ N  G   A A+A+ L+ N +L  L+L  N IGD         
Sbjct: 142 ISAALKVNTTLTSLDLSVNRIGDAEAQAIAEALKVNTTLIWLNLSFNQIGD--------- 192

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
                                GA  +AE +K    L+ + L  N+IG+     I  ALK 
Sbjct: 193 --------------------TGALAIAEALKVNTKLITLRLAHNEIGNAAVPSIVQALKM 232

Query: 414 NRTITTI 420
           N+ I  I
Sbjct: 233 NKKIRNI 239



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 78/156 (50%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     +S+D+   +  D G   +AE+L  N     ++F  N I  AG +A  
Sbjct: 84  QAIAELLKTNTTLTSLDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQAIS 143

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L +L+LS N IGD   + + + L  N  +  L LS   + D GA AIAE LK
Sbjct: 144 AALKVNTTLTSLDLSVNRIGDAEAQAIAEALKVNTTLIWLNLSFNQIGDTGALAIAEALK 203

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            N+ L  L L +N I  +   S+ +AL  N  IR++
Sbjct: 204 VNTKLITLRLAHNEIGNAAVPSIVQALKMNKKIRNI 239



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 79/163 (48%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GD G   +AE L  N T   +    N I  AG +A    L+ N  L  L    N IGD
Sbjct: 77  DIGDVGAQAIAELLKTNTTLTSLDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGD 136

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + +   L  N  +  L LS   + D  A+AIAE LK N+ L  L L+ N I  +G  
Sbjct: 137 AGAQAISAALKVNTTLTSLDLSVNRIGDAEAQAIAEALKVNTTLIWLNLSFNQIGDTGAL 196

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           ++AEAL  N+ + +L L  N  G     ++ + L+ NK +R +
Sbjct: 197 AIAEALKVNTKLITLRLAHNEIGNAAVPSIVQALKMNKKIRNI 239


>gi|320170242|gb|EFW47141.1| hypothetical protein CAOG_05085 [Capsaspora owczarzaki ATCC 30864]
          Length = 420

 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 134/251 (53%), Gaps = 18/251 (7%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E  L    IGD G +A+   L              N+        +AE +K   +L  + 
Sbjct: 2   EERLPEEEIGDAGAKAIAEALKV------------NATVTTLERTIAETLKVNTALTEL- 48

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             +N I + G   IA+ALK N ++T + LG N I   GA AIA  LK N+ +T L L  N
Sbjct: 49  --LNQIREGGMNAIAEALKVNTSVTALGLGINQIGDAGAQAIAETLKVNTTVTRLYLDQN 106

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A++E LK +  ++ L LG  +I  +GA  +A+ L+ N T++ LDL  N + +
Sbjct: 107 QIGEAGAQAIAETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGN 166

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            G   +A++ KV N +LT  +L  N+I D+GA AIA+ALK N   +V  LNLA N + K 
Sbjct: 167 LGMMAIAEALKV-NTSLTEHNLNVNQIGDEGAKAIAEALKVN--TSVKKLNLAFNCIGKV 223

Query: 574 GQSALTDAKDL 584
              A+ DA+ L
Sbjct: 224 AAQAIQDARPL 234



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 136/257 (52%), Gaps = 20/257 (7%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L    IGD G K + + L  NA V  L+           + IAE LK N+ L  L    N
Sbjct: 5   LPEEEIGDAGAKAIAEALKVNATVTTLE-----------RTIAETLKVNTALTELL---N 50

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G  ++AEAL  N+++ +L L  N  G  GA A+A+ L+ N ++  L+L  N IG+
Sbjct: 51  QIREGGMNAIAEALKVNTSVTALGLGINQIGDAGAQAIAETLKVNTTVTRLYLDQNQIGE 110

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G +A+   L   K  L+ L +G+N IS  GA  +AE +K   +L  ++L  N IG+ G 
Sbjct: 111 AGAQAIAETLKVNK-TLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGM 169

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             IA+ALK N ++T  +L  N I  +GA AIA  LK N+ +  L+LA+N IG   A+A+ 
Sbjct: 170 MAIAEALKVNTSLTEHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQAIQ 229

Query: 465 EV-----LKFHGNINTL 476
           +      LK +  IN L
Sbjct: 230 DARPLTELKLNYQINPL 246



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 136/276 (49%), Gaps = 22/276 (7%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A+A+ L+ N ++  L            R +   L        +L    N I   
Sbjct: 11  GDAGAKAIAEALKVNATVTTLE-----------RTIAETLKVNTALTELL----NQIREG 55

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   +AE +K   S+  + L +N IGD GA+ IA+ LK N T+T + L  N I   GA A
Sbjct: 56  GMNAIAEALKVNTSVTALGLGINQIGDAGAQAIAETLKVNTTVTRLYLDQNQIGEAGAQA 115

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N  ++ L L  N I   GA  ++E LK +  +  L LG  QIG  G   +A+ 
Sbjct: 116 IAETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEA 175

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L+ N +++  +L  N + DEGAK +A++ K VN ++  ++LAFN I   G  A AQA++ 
Sbjct: 176 LKVNTSLTEHNLNVNQIGDEGAKAIAEALK-VNTSVKKLNLAFNCI---GKVA-AQAIQD 230

Query: 555 NEDVAVTSLNLANNFLTKFGQSALTDAKDL--VYEM 588
              +    LN   N L    +  L  A+DL  V+ M
Sbjct: 231 ARPLTELKLNYQINPLAFALRPRLATAEDLQIVFRM 266



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 115/241 (47%), Gaps = 36/241 (14%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +AE+L  N    E+    N I   G+ A    L+ N ++  L L  N IGD G + + + 
Sbjct: 35  IAETLKVNTALTEL---LNQIREGGMNAIAEALKVNTSVTALGLGINQIGDAGAQAIAET 91

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  V RL L    + + GA+AIAE LK N  L  L L +N I  +G T +AEAL  N
Sbjct: 92  LKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDNRISDAGATPIAEALKVN 151

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           +T+ +L L  N  G LG  A+A+ L+ N SL E +L+ N IGDEG +A            
Sbjct: 152 TTLTALDLGKNQIGNLGMMAIAEALKVNTSLTEHNLNVNQIGDEGAKA------------ 199

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
                            +AE +K   S+  +NL  N IG   A+ I DA    R +T + 
Sbjct: 200 -----------------IAEALKVNTSVKKLNLAFNCIGKVAAQAIQDA----RPLTELK 238

Query: 422 L 422
           L
Sbjct: 239 L 239



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 90/173 (52%)

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G+  +AE+L  N +   +    N I  AG +A    L+ N  +  L L  N IG+ G + 
Sbjct: 56  GMNAIAEALKVNTSVTALGLGINQIGDAGAQAIAETLKVNTTVTRLYLDQNQIGEAGAQA 115

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           + + L  N  +  L L    + D GA  IAE LK N+ L  L+L  N I   G  ++AEA
Sbjct: 116 IAETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEA 175

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           L  N+++   +LN N  G  GA A+A+ L+ N S+++L+L  N IG    +A+
Sbjct: 176 LKVNTSLTEHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQAI 228



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 88/188 (46%), Gaps = 7/188 (3%)

Query: 154 LNEFAKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           +N  A+ L+  +SV   G      GD G   +AE+L  N T   +    N I  AG +A 
Sbjct: 57  MNAIAEALKVNTSVTALGLGINQIGDAGAQAIAETLKVNTTVTRLYLDQNQIGEAGAQAI 116

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
              L+ N  L  L L  N I D G   + + L  N  +  L L    + + G  AIAE L
Sbjct: 117 AETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEAL 176

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           K N+ L    LN N I   G  ++AEAL  N++++ L+L  N  G + A A    ++  +
Sbjct: 177 KVNTSLTEHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQA----IQDAR 232

Query: 331 SLRELHLH 338
            L EL L+
Sbjct: 233 PLTELKLN 240



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 4/159 (2%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + + +     G+ G   +AE+L  N+T  E+    N I+ AG     
Sbjct: 86  QAIAETLKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDNRISDAGATPIA 145

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L+L  N IG+ G+  + + L  N  +    L+   + DEGAKAIAE LK
Sbjct: 146 EALKVNTTLTALDLGKNQIGNLGMMAIAEALKVNTSLTEHNLNVNQIGDEGAKAIAEALK 205

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
            N+ ++ L L  N I        A+A+ +   +  L LN
Sbjct: 206 VNTSVKKLNLAFNCIGKVA----AQAIQDARPLTELKLN 240


>gi|281207706|gb|EFA81886.1| deliriumA [Polysphondylium pallidum PN500]
          Length = 617

 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 165/316 (52%), Gaps = 3/316 (0%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L  N  + TL LS N IG++   C+   LV+N  +  L LS   + +EGA+ I++ L  
Sbjct: 268 ILIDNKLITTLELSQNGIGNKAATCIGTCLVNNTTITHLNLSFNSIGNEGAEEISKALGT 327

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N  L  L+L+ N I   G  +L+ A+    T+  L+L+ N  G  G + +A  +  N  L
Sbjct: 328 NKTLTHLDLSQNCIGLKGSKALSTAIQTTKTLHILNLSKNRFGTKGIDVIADSIGKNTCL 387

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             +    N I ++  + ++  +      L  L+  + S+ +    +++E I+  ++L  I
Sbjct: 388 LNIDFSRNEISEKNAK-IIGDVIKNHPTLQSLNFCDTSLKSDSMKYISEGIQASQTLNSI 446

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N+ G +G++ +A AL+ + ++  +DL GN+I  KGA  IA  L DN  +T+L LA+
Sbjct: 447 DLSRNEFGYKGSKSLAVALQHSNSLAFLDLCGNDIGDKGAIPIAEALADNKSLTNLSLAF 506

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGW-CQIGASGAEFVADMLRYNNTIS-ILDLRANG 510
           N IG   A+ L   +K + ++ +L +    +IG  GA  +++ L YN  ++  + L  N 
Sbjct: 507 NNIGTQAAQQLGAAIKVNNSLVSLDISINAEIGPIGATSISEGLCYNKRLTQQIILTHNN 566

Query: 511 LRDEGAKCLAQSFKVV 526
           +  +G + +  + + V
Sbjct: 567 INQQGVQTMKDTLEQV 582



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 153/288 (53%), Gaps = 6/288 (2%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L   + D + F  +   L++N  I +L L+ N  G   A  +   L  N ++  L+L  N
Sbjct: 254 LTPTLFDVTSFVKMI--LIDNKLITTLELSQNGIGNKAATCIGTCLVNNTTITHLNLSFN 311

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           SIG+EG   +   L + K  L  LD+  N I  KG+  ++  I+  K+L  +NL  N  G
Sbjct: 312 SIGNEGAEEISKALGTNK-TLTHLDLSQNCIGLKGSKALSTAIQTTKTLHILNLSKNRFG 370

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            +G + IAD++ +N  +  ID   N I  K A  I  V+K++  + SL+     + +D  
Sbjct: 371 TKGIDVIADSIGKNTCLLNIDFSRNEISEKNAKIIGDVIKNHPTLQSLNFCDTSLKSDSM 430

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
           K +SE ++    +N++ L   + G  G++ +A  L+++N+++ LDL  N + D+GA  +A
Sbjct: 431 KYISEGIQASQTLNSIDLSRNEFGYKGSKSLAVALQHSNSLAFLDLCGNDIGDKGAIPIA 490

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           ++    N++LT++ LAFN I    A  +  A+K N   ++ SL+++ N
Sbjct: 491 EAL-ADNKSLTNLSLAFNNIGTQAAQQLGAAIKVNN--SLVSLDISIN 535



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 148/294 (50%), Gaps = 3/294 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +++S  + G+EG   ++++LG N+T   +  + N I   G KA    +Q+   L  
Sbjct: 302 TITHLNLSFNSIGNEGAEEISKALGTNKTLTHLDLSQNCIGLKGSKALSTAIQTTKTLHI 361

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNLS N  G +G+  + D +  N  +  +  S  ++ ++ AK I +++KN+  L+ L   
Sbjct: 362 LNLSKNRFGTKGIDVIADSIGKNTCLLNIDFSRNEISEKNAKIIGDVIKNHPTLQSLNFC 421

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +  +       ++E +  + T+ S+ L+ N  G  G+ +LA  L+ + SL  L L GN I
Sbjct: 422 DTSLKSDSMKYISEGIQASQTLNSIDLSRNEFGYKGSKSLAVALQHSNSLAFLDLCGNDI 481

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN-DIGD 401
           GD+G   +   L+  K  L  L +  N+I  + A  +   IK   SL+ +++ +N +IG 
Sbjct: 482 GDKGAIPIAEALADNKS-LTNLSLAFNNIGTQAAQQLGAAIKVNNSLVSLDISINAEIGP 540

Query: 402 EGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            GA  I++ L  N+ +T  I L  NNI+ +G   +   L+   V+T     Y P
Sbjct: 541 IGATSISEGLCYNKRLTQQIILTHNNINQQGVQTMKDTLEQVFVVTFDSYIYPP 594



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 159/318 (50%), Gaps = 3/318 (0%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
           F+   L  N+    +  + NGI           L +N  +  LNLS N IG+EG + +  
Sbjct: 264 FVKMILIDNKLITTLELSQNGIGNKAATCIGTCLVNNTTITHLNLSFNSIGNEGAEEISK 323

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L  N  +  L LS   +  +G+KA++  ++    L +L L+ N     G   +A+++ +
Sbjct: 324 ALGTNKTLTHLDLSQNCIGLKGSKALSTAIQTTKTLHILNLSKNRFGTKGIDVIADSIGK 383

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N+ + ++  + N      A  +   ++ + +L+ L+    S+  + ++ +  G+ + +  
Sbjct: 384 NTCLLNIDFSRNEISEKNAKIIGDVIKNHPTLQSLNFCDTSLKSDSMKYISEGIQASQ-T 442

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  +D+  N    KG+  +A  +++  SL +++L  NDIGD+GA  IA+AL  N+++T +
Sbjct: 443 LNSIDLSRNEFGYKGSKSLAVALQHSNSLAFLDLCGNDIGDKGAIPIAEALADNKSLTNL 502

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYN-PIGADGAKALSEVLKFHGNI-NTLKL 478
            L  NNI ++ A  +   +K N+ + SLD++ N  IG  GA ++SE L ++  +   + L
Sbjct: 503 SLAFNNIGTQAAQQLGAAIKVNNSLVSLDISINAEIGPIGATSISEGLCYNKRLTQQIIL 562

Query: 479 GWCQIGASGAEFVADMLR 496
               I   G + + D L 
Sbjct: 563 THNNINQQGVQTMKDTLE 580



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 113/222 (50%), Gaps = 13/222 (5%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +    +++S   FG +G+  +A+S+G N     + F+ N I+    K    V++++  L+
Sbjct: 357 KTLHILNLSKNRFGTKGIDVIADSIGKNTCLLNIDFSRNEISEKNAKIIGDVIKNHPTLQ 416

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQ-LSSVDL-RDE----GAKAIAELLKNNSI 275
           +LN     +  + +K + +      G++  Q L+S+DL R+E    G+K++A  L++++ 
Sbjct: 417 SLNFCDTSLKSDSMKYISE------GIQASQTLNSIDLSRNEFGYKGSKSLAVALQHSNS 470

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L+L  N I   G   +AEAL +N ++ +L L  N  G   A  L   ++ N SL  L
Sbjct: 471 LAFLDLCGNDIGDKGAIPIAEALADNKSLTNLSLAFNNIGTQAAQQLGAAIKVNNSLVSL 530

Query: 336 HLHGNS-IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            +  N+ IG  G  ++  GL   K     + + +N+I+ +G 
Sbjct: 531 DISINAEIGPIGATSISEGLCYNKRLTQQIILTHNNINQQGV 572



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 30/227 (13%)

Query: 131 SVGAGTNLLS-GFT-GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGY 188
           S+G  T LL+  F+  ++  ++ + + +  K      S++    +   + + +++E +  
Sbjct: 380 SIGKNTCLLNIDFSRNEISEKNAKIIGDVIKNHPTLQSLNFCDTSLKSDSMKYISEGIQA 439

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           +QT   +  + N     G K+    LQ + +L  L+L GN IGD+G   + + L DN  +
Sbjct: 440 SQTLNSIDLSRNEFGYKGSKSLAVALQHSNSLAFLDLCGNDIGDKGAIPIAEALADNKSL 499

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
             L L+  ++  + A+ +   +K N+ L  L+++ N          AE            
Sbjct: 500 TNLSLAFNNIGTQAAQQLGAAIKVNNSLVSLDISIN----------AEI----------- 538

Query: 309 LNGNYGGALGANALAKGLEGNKSL-RELHLHGNSIGDEGIRALMSGL 354
                 G +GA ++++GL  NK L +++ L  N+I  +G++ +   L
Sbjct: 539 ------GPIGATSISEGLCYNKRLTQQIILTHNNINQQGVQTMKDTL 579


>gi|74203197|dbj|BAE26275.1| unnamed protein product [Mus musculus]
          Length = 456

 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S    G+T AG     G+L+S   L
Sbjct: 52  ALTELSLRTNELGDGGVGLVLQGL-QNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GD G+K LC+ L D    +E+LQL   +L     + +A +L+  +  + L
Sbjct: 111 RELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN +   G   L + L +++  + SL L      A     L   +    SL+EL L 
Sbjct: 171 VLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLS 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL  GL     KL  L +    I+A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNE 290

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA  + ++ L+    + ++ +   ++ +        VL  N  +  L ++ NP+G 
Sbjct: 291 LKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKNRSLLELQMSSNPLGD 350

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
           +G + L + L     +   L LG C +  SG   +A++L  N ++  LDL  N +   G 
Sbjct: 351 EGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNCMGGPGV 410

Query: 517 KCLAQSFK 524
             L +S K
Sbjct: 411 LQLLESLK 418



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 4/314 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + ++    GD GL  L E L   Q   E++      +TA   +    VL+  
Sbjct: 105 RSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVK 164

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              K L LS N + + GV+ LC  L D+A  +E L+L +  +     K + +++ + + L
Sbjct: 165 ADFKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASL 224

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L++N +  +G  +L   LL  S  +R+L L      A G   L + L   +SL+EL
Sbjct: 225 QELDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKEL 284

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N + DEG R L   L     +L  L I   S++A    +    +   +SLL + + 
Sbjct: 285 SLASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKNRSLLELQMS 344

Query: 396 MNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GDEG +++  AL Q  T+   + LG  ++ + G S++A VL  N  +  LDL+ N 
Sbjct: 345 SNPLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNC 404

Query: 455 IGADGAKALSEVLK 468
           +G  G   L E LK
Sbjct: 405 MGGPGVLQLLESLK 418



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 183/409 (44%), Gaps = 9/409 (2%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+      D       E L   Q  E V     G+T    K     +Q+N AL  L+L
Sbjct: 2   SLDIQCEQLSD---ARWTELLPLIQQYEVVRLDDCGLTEVRCKDISSAVQANPALTELSL 58

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV  +   L +    +++L L +  L + G   +  +L++ S LR L LN+N
Sbjct: 59  RTNELGDGGVGLVLQGLQNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTLRELHLNDN 118

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E L +    +  L L      A     LA  L      +EL L  N + 
Sbjct: 119 PMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKELVLSNNDLH 178

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L  L + N  I+A     + + + +  SL  ++L  N +G+ G
Sbjct: 179 EPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLSSNKLGNAG 238

Query: 404 AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              +   L   +  + T+ L   +I ++G   + RVL+    +  L LA N +  +GA+ 
Sbjct: 239 IAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNELKDEGARL 298

Query: 463 LSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           L E L   G  + +L +  C + A+   +   +L  N ++  L + +N L DEG + L +
Sbjct: 299 LCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKNRSLLELQMSSNPLGDEGVQELCK 358

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           +    +  L  + L   ++ + G  ++A  L AN   ++  L+L+NN +
Sbjct: 359 ALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANR--SLRELDLSNNCM 405



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 3/253 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           F  + +S  +  + G+  L + L  +    E +     GITAA  K    V+ S  +L+ 
Sbjct: 167 FKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQE 226

Query: 223 LNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+LS N +G+ G+  LC  +L+ +  +  L L   D+  EG K +  +L+    L+ L L
Sbjct: 227 LDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSL 286

Query: 282 NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            +N +   G   L E+LLE    + SL +      A         L  N+SL EL +  N
Sbjct: 287 ASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKNRSLLELQMSSN 346

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GDEG++ L   LS     L  L +G+  ++  G   +A  +   +SL  ++L  N +G
Sbjct: 347 PLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNCMG 406

Query: 401 DEGAEKIADALKQ 413
             G  ++ ++LKQ
Sbjct: 407 GPGVLQLLESLKQ 419


>gi|440906587|gb|ELR56835.1| Ribonuclease inhibitor, partial [Bos grunniens mutus]
          Length = 460

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 186/397 (46%), Gaps = 8/397 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + + L       +++S     +T AG  A  GVL+S   L+
Sbjct: 56  SLTELSLRTNELGDGGVLLVLQGLQSPTCKIQKLSLQNCCLTEAGCGALPGVLRSLPTLR 115

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+GD G++ LC+ L+D    +E+LQL    L     + +A +L+    L+ L 
Sbjct: 116 ELHLSDNPLGDAGLRLLCEGLLDPQCRLEKLQLEYCSLTAASCEPLAAVLRATRDLKELV 175

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I  +G  +L   L E++  + +L L      A     L   +    SL++L L  
Sbjct: 176 VSNNDIGEAGVQALCRGLAESACQLETLKLENCGLTAANCKDLCGIVASQASLKDLDLGS 235

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL S   +L  L +    ++  G   +   ++  ++L  ++L  N +
Sbjct: 236 NRLGDAGLAELCPGLLSPSSQLRTLWLWECDLTVSGCRDLCRVLQAKEALKELSLAGNSL 295

Query: 400 GDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA+ + ++L Q    + ++ +      +      + VL  N  +  L L+ NP+G  
Sbjct: 296 GDEGAQLLCESLLQPGCQLESLWVKSCGFTAACCQHFSSVLTQNKHLLELQLSSNPLGDA 355

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G   L + L   G +   L +G C++  S    +A +L  + ++  LDL  NGL D G  
Sbjct: 356 GVHVLCQALGQPGTVLRVLWVGDCELTNSSCGGLASLLLASPSLRELDLSNNGLGDPGVL 415

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDDGAFAIAQA 551
            L  S +      E L   D+ + E  D+   A+ ++
Sbjct: 416 QLLGSLEQPACSLEQLVLYDIYWTEAVDERLRAVEES 452



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 178/400 (44%), Gaps = 16/400 (4%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           E L   Q  E V     G+T    K     LQ+N +L  L+L  N +GD GV     +LV
Sbjct: 21  ELLPLIQQYEVVRLDDCGLTEVRCKDIGSALQANASLTELSLRTNELGDGGV-----LLV 75

Query: 244 ------DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
                     +++L L +  L + G  A+  +L++   LR L L++N +  +G   L E 
Sbjct: 76  LQGLQSPTCKIQKLSLQNCCLTEAGCGALPGVLRSLPTLRELHLSDNPLGDAGLRLLCEG 135

Query: 298 LLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           LL+    +  L L      A     LA  L   + L+EL +  N IG+ G++AL  GL+ 
Sbjct: 136 LLDPQCRLEKLQLEYCSLTAASCEPLAAVLRATRDLKELVVSNNDIGEAGVQALCRGLAE 195

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNR 415
              +L  L + N  ++A     +   + +  SL  ++L  N +GD G AE     L  + 
Sbjct: 196 SACQLETLKLENCGLTAANCKDLCGIVASQASLKDLDLGSNRLGDAGLAELCPGLLSPSS 255

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NIN 474
            + T+ L   ++   G   + RVL+    +  L LA N +G +GA+ L E L   G  + 
Sbjct: 256 QLRTLWLWECDLTVSGCRDLCRVLQAKEALKELSLAGNSLGDEGAQLLCESLLQPGCQLE 315

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
           +L +  C   A+  +  + +L  N  +  L L +N L D G   L Q+       L  + 
Sbjct: 316 SLWVKSCGFTAACCQHFSSVLTQNKHLLELQLSSNPLGDAGVHVLCQALGQPGTVLRVLW 375

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           +   E+ +     +A  L A+   ++  L+L+NN L   G
Sbjct: 376 VGDCELTNSSCGGLASLLLASP--SLRELDLSNNGLGDPG 413



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 10/320 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + +S    GD GL  L E L   Q   E++      +TAA  +    VL++ 
Sbjct: 109 RSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCRLEKLQLEYCSLTAASCEPLAAVLRAT 168

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
             LK L +S N IG+ GV+ LC  L ++A  +E L+L +  L     K +  ++ + + L
Sbjct: 169 RDLKELVVSNNDIGEAGVQALCRGLAESACQLETLKLENCGLTAANCKDLCGIVASQASL 228

Query: 277 RVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L +N +  +G   L   LL  +S +R+L L        G   L + L+  ++L+EL
Sbjct: 229 KDLDLGSNRLGDAGLAELCPGLLSPSSQLRTLWLWECDLTVSGCRDLCRVLQAKEALKEL 288

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GNS+GDEG + L   L     +L  L + +   +A    H +  +   K LL + L 
Sbjct: 289 SLAGNSLGDEGAQLLCESLLQPGCQLESLWVKSCGFTAACCQHFSSVLTQNKHLLELQLS 348

Query: 396 MNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GD G   +  AL Q  T+   + +G   + +     +A +L  +  +  LDL+ N 
Sbjct: 349 SNPLGDAGVHVLCQALGQPGTVLRVLWVGDCELTNSSCGGLASLLLASPSLRELDLSNNG 408

Query: 455 IGADGAKALSEVLKFHGNIN 474
           +G  G      VL+  G++ 
Sbjct: 409 LGDPG------VLQLLGSLE 422


>gi|291277984|gb|ADD91459.1| leucine rich repeat containing protein [Adineta vaga]
          Length = 316

 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 112/181 (61%), Gaps = 3/181 (1%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           +L  I+L  ++IGD+GA+ I DAL+ N T+T +DLG N I  +GA  I   L+ N+ +++
Sbjct: 135 TLTTIDLGCDEIGDQGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLST 194

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L+L  N +G  GA+ + + L+ +  ++TL L   Q+G  GA+ + D LR N T++ LDL 
Sbjct: 195 LNLRSNQVGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDLG 254

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
            N + D+GA+ +  + + +N  L +++LA NEI D GA  I  AL+ N    +T+L+L  
Sbjct: 255 YNEIGDQGAQLIGDALR-INTTLRTLNLANNEIDDQGAEHIGDALRIN--TTLTTLDLGY 311

Query: 568 N 568
           N
Sbjct: 312 N 312



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 111/182 (60%), Gaps = 1/182 (0%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  +D+G + I  +GA  + + ++   +L  ++L  N+IG +GA+ I DAL+ N T++T+
Sbjct: 136 LTTIDLGCDEIGDQGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLSTL 195

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           +L  N +  +GA  I   L+ N+ +++L+L  N +G  GA+ + + L+ +  +  L LG+
Sbjct: 196 NLRSNQVGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDLGY 255

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            +IG  GA+ + D LR N T+  L+L  N + D+GA+ +  + + +N  LT++DL +NEI
Sbjct: 256 NEIGDQGAQLIGDALRINTTLRTLNLANNEIDDQGAEHIGDALR-INTTLTTLDLGYNEI 314

Query: 541 RD 542
            D
Sbjct: 315 GD 316



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 100/174 (57%), Gaps = 1/174 (0%)

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           + IGD+G + +   L      L  LD+G N I  +GA H+ + ++   +L  +NL  N +
Sbjct: 144 DEIGDQGAQLIGDALRINT-TLTALDLGYNEIGHQGAQHIGDALRTNTTLSTLNLRSNQV 202

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G +GA+ I DAL+ N T++T++L  N +  +GA  I   L+ N+ +T+LDL YN IG  G
Sbjct: 203 GHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDLGYNEIGDQG 262

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           A+ + + L+ +  + TL L   +I   GAE + D LR N T++ LDL  N + D
Sbjct: 263 AQLIGDALRINTTLRTLNLANNEIDDQGAEHIGDALRINTTLTTLDLGYNEIGD 316



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 97/184 (52%), Gaps = 1/184 (0%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           + L T++L  + IGD+G + + D L  N  +  L L   ++  +GA+ I + L+ N+ L 
Sbjct: 134 LTLTTIDLGCDEIGDQGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLS 193

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            L L +N + + G   + +AL  N+T+ +L+L  N  G  GA  +   L  N +L  L L
Sbjct: 194 TLNLRSNQVGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDL 253

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             N IGD+G + +   L      L  L++ NN I  +GA H+ + ++   +L  ++L  N
Sbjct: 254 GYNEIGDQGAQLIGDALRINT-TLRTLNLANNEIDDQGAEHIGDALRINTTLTTLDLGYN 312

Query: 398 DIGD 401
           +IGD
Sbjct: 313 EIGD 316



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 88/182 (48%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             +++D+     GD+G   + ++L  N T   +    N I   G +     L++N  L T
Sbjct: 135 TLTTIDLGCDEIGDQGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLST 194

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL  N +G +G + + D L  N  +  L L S  +  +GA+ I + L+ N+ L  L+L 
Sbjct: 195 LNLRSNQVGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDLG 254

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G   + +AL  N+T+R+L+L  N     GA  +   L  N +L  L L  N I
Sbjct: 255 YNEIGDQGAQLIGDALRINTTLRTLNLANNEIDDQGAEHIGDALRINTTLTTLDLGYNEI 314

Query: 343 GD 344
           GD
Sbjct: 315 GD 316


>gi|285402659|ref|NP_001165572.1| ribonuclease inhibitor isoform b [Mus musculus]
          Length = 492

 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S    G+T AG     G+L+S   L
Sbjct: 88  ALTELSLRTNELGDGGVGLVLQGL-QNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTL 146

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GD G+K LC+ L D    +E+LQL   +L     + +A +L+  +  + L
Sbjct: 147 RELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKEL 206

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN +   G   L + L +++  + SL L      A     L   +    SL+EL L 
Sbjct: 207 VLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLS 266

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL  GL     KL  L +    I+A+G   +   ++  +SL  ++L  N+
Sbjct: 267 SNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNE 326

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA  + ++ L+    + ++ +   ++ +        VL  +  +  L ++ NP+G 
Sbjct: 327 LKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGD 386

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
           +G + L + L     +   L LG C +  SG   +A++L  N ++  LDL  N +   G 
Sbjct: 387 EGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNCMGGPGV 446

Query: 517 KCLAQSFK 524
             L +S K
Sbjct: 447 LQLLESLK 454



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 4/314 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + ++    GD GL  L E L   Q   E++      +TA   +    VL+  
Sbjct: 141 RSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVK 200

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              K L LS N + + GV+ LC  L D+A  +E L+L +  +     K + +++ + + L
Sbjct: 201 ADFKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASL 260

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L++N +  +G  +L   LL  S  +R+L L      A G   L + L   +SL+EL
Sbjct: 261 QELDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKEL 320

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N + DEG R L   L     +L  L I   S++A    +    +   +SLL + + 
Sbjct: 321 SLASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMS 380

Query: 396 MNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GDEG +++  AL Q  T+   + LG  ++ + G S++A VL  N  +  LDL+ N 
Sbjct: 381 SNPLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNC 440

Query: 455 IGADGAKALSEVLK 468
           +G  G   L E LK
Sbjct: 441 MGGPGVLQLLESLK 454



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 183/409 (44%), Gaps = 9/409 (2%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+      D       E L   Q  E V     G+T    K     +Q+N AL  L+L
Sbjct: 38  SLDIQCEQLSDA---RWTELLPLIQQYEVVRLDDCGLTEVRCKDISSAVQANPALTELSL 94

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV  +   L +    +++L L +  L + G   +  +L++ S LR L LN+N
Sbjct: 95  RTNELGDGGVGLVLQGLQNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTLRELHLNDN 154

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E L +    +  L L      A     LA  L      +EL L  N + 
Sbjct: 155 PMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKELVLSNNDLH 214

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L  L + N  I+A     + + + +  SL  ++L  N +G+ G
Sbjct: 215 EPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLSSNKLGNAG 274

Query: 404 AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              +   L   +  + T+ L   +I ++G   + RVL+    +  L LA N +  +GA+ 
Sbjct: 275 IAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNELKDEGARL 334

Query: 463 LSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           L E L   G  + +L +  C + A+   +   +L  + ++  L + +N L DEG + L +
Sbjct: 335 LCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGDEGVQELCK 394

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           +    +  L  + L   ++ + G  ++A  L AN   ++  L+L+NN +
Sbjct: 395 ALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANR--SLRELDLSNNCM 441



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 3/253 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           F  + +S  +  + G+  L + L  +    E +     GITAA  K    V+ S  +L+ 
Sbjct: 203 FKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQE 262

Query: 223 LNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+LS N +G+ G+  LC  +L+ +  +  L L   D+  EG K +  +L+    L+ L L
Sbjct: 263 LDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSL 322

Query: 282 NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            +N +   G   L E+LLE    + SL +      A         L  ++SL EL +  N
Sbjct: 323 ASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSN 382

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GDEG++ L   LS     L  L +G+  ++  G   +A  +   +SL  ++L  N +G
Sbjct: 383 PLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNCMG 442

Query: 401 DEGAEKIADALKQ 413
             G  ++ ++LKQ
Sbjct: 443 GPGVLQLLESLKQ 455


>gi|320168103|gb|EFW45002.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 682

 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/222 (40%), Positives = 129/222 (58%), Gaps = 3/222 (1%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N ++ EL L GN I D G RA+   + +    L V+D+  N I   GA   AE +K   +
Sbjct: 47  NTTMTELKLGGNLIADVGARAIAEAVRA-NCTLTVVDLAENRIGDAGARAFAETLKVNNT 105

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  ++L  N IGD GA+ IA+ALK N+T+T + L  N I + GA AIA  LK N+ +T L
Sbjct: 106 LTKLDLNENQIGDAGAQAIAEALKVNKTLTRLGLWHNQIGAAGAQAIADALKVNTTLTEL 165

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L  N IG DGA+A++E L+ +  +  L L   QI  +GA+ +AD L+ N T++ L+L  
Sbjct: 166 YLYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITCTGAQALADALKANTTVTKLELGE 225

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           N + D GA+ +A++ K VNE LT + L  N +  DG  A  Q
Sbjct: 226 NQIGDAGARAIAEALK-VNETLTML-LNNNFLTTDGIAAFRQ 265



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 144/302 (47%), Gaps = 35/302 (11%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E +Q L +  K+  A   +D+  +  G+     +AE++  N T  E+    N I   G +
Sbjct: 9   EKQQKLFDTVKD--ASQQLDLCKKQIGNAEAKAIAEAIKVNTTMTELKLGGNLIADVGAR 66

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    +++N  L  ++L+ N IGD G +   + L  N  + +L L+   + D GA+AIAE
Sbjct: 67  AIAEAVRANCTLTVVDLAENRIGDAGARAFAETLKVNNTLTKLDLNENQIGDAGAQAIAE 126

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N  L  L L +N I  +G  ++A+AL  N+T+  L+L  N  G  GA A+A+ LE 
Sbjct: 127 ALKVNKTLTRLGLWHNQIGAAGAQAIADALKVNTTLTELYLYQNKIGDDGAQAIAEALEV 186

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L +L+L  N I   G +AL   L +    +  L++G N                   
Sbjct: 187 NTTLTKLYLWENQITCTGAQALADALKANT-TVTKLELGENQ------------------ 227

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
                     IGD GA  IA+ALK N T+T + L  N + + G   IA   +  + I  L
Sbjct: 228 ----------IGDAGARAIAEALKVNETLTML-LNNNFLTTDG---IAAFRQTGNAICDL 273

Query: 449 DL 450
           DL
Sbjct: 274 DL 275


>gi|320162653|gb|EFW39552.1| hypothetical protein CAOG_00077 [Capsaspora owczarzaki ATCC 30864]
          Length = 398

 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 136/278 (48%), Gaps = 30/278 (10%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V N  +  L L    + D GA+ IAE LK N  +  L L  N I + G  ++AEA+  N+
Sbjct: 12  VKNNAIGLLSLWREQIGDAGAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNT 71

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           T+  L LN N+ G LGA A+A+ L  NK L++L L  N IGD G RA             
Sbjct: 72  TLTQLSLNANHTGDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRA------------- 118

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
                           +AE +K  K+L  ++L  N IG++GA+ +A+AL+ N T+T +DL
Sbjct: 119 ----------------IAEALKVNKTLTSLSLERNQIGNDGAQSLAEALRVNTTVTRLDL 162

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I   GA A+A  LK+N+ +T L+L +N IG  G +A+ +    +  +   +    Q
Sbjct: 163 EQNQIGDAGARALAEALKENTTLTLLELNHNAIGDAGMEAVYDAWDVNATVEDTRFENPQ 222

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEG-AKCL 519
           I       +       ++ ++  L   GL  E  + CL
Sbjct: 223 ISPLALAMIPRFTTAEDSQTVFGLLTRGLELENQSACL 260



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 116/193 (60%), Gaps = 3/193 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L+   IGD GAE IA+ALK+N+ +  + LG N I   G  AIA  ++ N+ +T L L 
Sbjct: 20  LSLWREQIGDAGAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNTTLTQLSLN 79

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N  G  GA+A++E L  +  +  L LG  QIG +G   +A+ L+ N T++ L L  N +
Sbjct: 80  ANHTGDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTSLSLERNQI 139

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            ++GA+ LA++ +V N  +T +DL  N+I D GA A+A+ALK  E+  +T L L +N + 
Sbjct: 140 GNDGAQSLAEALRV-NTTVTRLDLEQNQIGDAGARALAEALK--ENTTLTLLELNHNAIG 196

Query: 572 KFGQSALTDAKDL 584
             G  A+ DA D+
Sbjct: 197 DAGMEAVYDAWDV 209



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 1/197 (0%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N ++  L L    IGD G   +   L   + K+  L +G N I   G   +AE I+   +
Sbjct: 14  NNAIGLLSLWREQIGDAGAETIAEALKENQ-KVVKLILGENRIGHVGTLAIAEAIRVNTT 72

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  ++L  N  GD GA  IA+AL  N+ +  + LG N I   G  AIA  LK N  +TSL
Sbjct: 73  LTQLSLNANHTGDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTSL 132

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L  N IG DGA++L+E L+ +  +  L L   QIG +GA  +A+ L+ N T+++L+L  
Sbjct: 133 SLERNQIGNDGAQSLAEALRVNTTVTRLDLEQNQIGDAGARALAEALKENTTLTLLELNH 192

Query: 509 NGLRDEGAKCLAQSFKV 525
           N + D G + +  ++ V
Sbjct: 193 NAIGDAGMEAVYDAWDV 209



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 106/201 (52%), Gaps = 1/201 (0%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           + +L +    I   GA  +AE +K  + ++ + L  N IG  G   IA+A++ N T+T +
Sbjct: 17  IGLLSLWREQIGDAGAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNTTLTQL 76

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L  N+    GA AIA  L  N  +  L L  N IG  G +A++E LK +  + +L L  
Sbjct: 77  SLNANHTGDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTSLSLER 136

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            QIG  GA+ +A+ LR N T++ LDL  N + D GA+ LA++ K  N  LT ++L  N I
Sbjct: 137 NQIGNDGAQSLAEALRVNTTVTRLDLEQNQIGDAGARALAEALK-ENTTLTLLELNHNAI 195

Query: 541 RDDGAFAIAQALKANEDVAVT 561
            D G  A+  A   N  V  T
Sbjct: 196 GDAGMEAVYDAWDVNATVEDT 216



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 93/178 (52%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             GD G   +AE+L  NQ   ++    N I   G  A    ++ N  L  L+L+ N  GD
Sbjct: 26  QIGDAGAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNTTLTQLSLNANHTGD 85

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + + + LV N  +++L L    + D G +AIAE LK N  L  L L  N I   G  
Sbjct: 86  LGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTSLSLERNQIGNDGAQ 145

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           SLAEAL  N+T+  L L  N  G  GA ALA+ L+ N +L  L L+ N+IGD G+ A+
Sbjct: 146 SLAEALRVNTTVTRLDLEQNQIGDAGARALAEALKENTTLTLLELNHNAIGDAGMEAV 203



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 102/201 (50%), Gaps = 1/201 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N A+  L+L    IGD G + + + L +N  V +L L    +   G  AIAE ++ N+ L
Sbjct: 14  NNAIGLLSLWREQIGDAGAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNTTL 73

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L LN N     G  ++AEAL+ N  ++ L L  N  G  G  A+A+ L+ NK+L  L 
Sbjct: 74  TQLSLNANHTGDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTSLS 133

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N IG++G ++L   L      +  LD+  N I   GA  +AE +K   +L  + L  
Sbjct: 134 LERNQIGNDGAQSLAEALRV-NTTVTRLDLEQNQIGDAGARALAEALKENTTLTLLELNH 192

Query: 397 NDIGDEGAEKIADALKQNRTI 417
           N IGD G E + DA   N T+
Sbjct: 193 NAIGDAGMEAVYDAWDVNATV 213



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 98/205 (47%)

Query: 138 LLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF 197
           LLS +  ++     +T+ E  KE +    + +     G  G   +AE++  N T  ++S 
Sbjct: 19  LLSLWREQIGDAGAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNTTLTQLSL 78

Query: 198 AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
            AN     G +A    L  N  L+ L L  N IGD G + + + L  N  +  L L    
Sbjct: 79  NANHTGDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTSLSLERNQ 138

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           + ++GA+++AE L+ N+ +  L+L  N I  +G  +LAEAL EN+T+  L LN N  G  
Sbjct: 139 IGNDGAQSLAEALRVNTTVTRLDLEQNQIGDAGARALAEALKENTTLTLLELNHNAIGDA 198

Query: 318 GANALAKGLEGNKSLRELHLHGNSI 342
           G  A+    + N ++ +       I
Sbjct: 199 GMEAVYDAWDVNATVEDTRFENPQI 223


>gi|207743293|ref|YP_002259685.1| type III effector gala6 protein [Ralstonia solanacearum IPO1609]
 gi|206594690|emb|CAQ61617.1| type III effector gala6 protein [Ralstonia solanacearum IPO1609]
          Length = 625

 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 206/435 (47%), Gaps = 74/435 (17%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + +S+ ++G + GD     LA+S    ++   +  + N I   G +A  G       L +
Sbjct: 212 SLTSLSLTGCSIGDRAATALAQS----RSIASLDLSVNMIGPDGARALAGA-----PLVS 262

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL  N IGDEG   L      +  ++ L  S+  + D G    A+    N++L  L L 
Sbjct: 263 LNLHNNGIGDEGALALAT----SGTLKSLNASNNGIGDAGVLGFAD----NTVLTQLNLA 314

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            NMI  +G    A AL  N+++  L L+ N  G  GA  LA    G++SL  L++  N I
Sbjct: 315 GNMIGPAG----ARALRRNTSLTELDLSTNRLGDAGAQVLA----GSRSLTSLNVRNNEI 366

Query: 343 GDEGIRALMSGLSSRK-------------------GKLAVLDIGNNSISAKGAFHVAEYI 383
           GD+G  AL    + +                      L+ LD+   +I   GA  +A   
Sbjct: 367 GDDGTEALARNTTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASALARNT 426

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
               S+  ++L  N IGD GA  IA      RT+T +DL  NNIH  G    A+VL  N 
Sbjct: 427 ----SVASLHLGSNRIGDSGARAIATI----RTLTLLDLSRNNIHDAG----AQVLAGND 474

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            + SL+L  N IG DG  AL++    H  + +L L   +IG +GA+ +A     + T++ 
Sbjct: 475 SLMSLNLDDNEIGDDGTAALAQ----HPRLTSLNLASNRIGPTGAQHLA----KSATLTE 526

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           LDL  N +  EGA+ L+     ++  LT+++++ N I + GA A A+     +  ++TSL
Sbjct: 527 LDLSENRIGPEGAEALS-----LSTVLTTLNVSGNAIGEAGARAFAE-----KSTSLTSL 576

Query: 564 NLANNFLTKFGQSAL 578
           +  NN + + G   L
Sbjct: 577 DARNNRMGEAGAKML 591



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 197/412 (47%), Gaps = 70/412 (16%)

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
           T +G+      L +   LK+L+L+G  I  EG + L       A +  L L+   + D  
Sbjct: 172 TGSGVSNAGLALLATRPLKSLSLNGIEIDAEGARLLATC----ASLTSLSLTGCSIGDRA 227

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A A+A+    +  +  L+L+ NMI   G  +LA A L      SL+L+ N  G  GA AL
Sbjct: 228 ATALAQ----SRSIASLDLSVNMIGPDGARALAGAPLV-----SLNLHNNGIGDEGALAL 278

Query: 323 AK--------------------GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           A                     G   N  L +L+L GN IG  G RAL      R   L 
Sbjct: 279 ATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMIGPAGARALR-----RNTSLT 333

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            LD+  N +   G    A+ +   +SL  +N+  N+IGD+G E    AL +N T+ +++L
Sbjct: 334 ELDLSTNRLGDAG----AQVLAGSRSLTSLNVRNNEIGDDGTE----ALARNTTLKSLNL 385

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I  +GA A+      N+ ++ LDL    I   GA AL+     + ++ +L LG  +
Sbjct: 386 SYNRIGLQGAGAL----GGNTTLSELDLRACAIDPYGASALAR----NTSVASLHLGSNR 437

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           IG SGA  +A +     T+++LDL  N + D GA+ LA      N++L S++L  NEI D
Sbjct: 438 IGDSGARAIATI----RTLTLLDLSRNNIHDAGAQVLAG-----NDSLMSLNLDDNEIGD 488

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV-YEMSEKEV 593
           DG  A+AQ  +      +TSLNLA+N +   G   L  +  L   ++SE  +
Sbjct: 489 DGTAALAQHPR------LTSLNLASNRIGPTGAQHLAKSATLTELDLSENRI 534



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 161/366 (43%), Gaps = 88/366 (24%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+++     GDEG   LA S     T + ++ + NGI  AG+  F      N  L  LNL
Sbjct: 262 SLNLHNNGIGDEGALALATS----GTLKSLNASNNGIGDAGVLGF----ADNTVLTQLNL 313

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA------------------ 267
           +GN IG  G + L      N  +  L LS+  L D GA+ +A                  
Sbjct: 314 AGNMIGPAGARAL----RRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNVRNNEIGDD 369

Query: 268 --ELLKNNSILRVLELNNNMIDYSGF------TSLAE--------------ALLENSTIR 305
             E L  N+ L+ L L+ N I   G       T+L+E              AL  N+++ 
Sbjct: 370 GTEALARNTTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASALARNTSVA 429

Query: 306 SLHLNGNYGGALGANALA--------------------KGLEGNKSLRELHLHGNSIGDE 345
           SLHL  N  G  GA A+A                    + L GN SL  L+L  N IGD+
Sbjct: 430 SLHLGSNRIGDSGARAIATIRTLTLLDLSRNNIHDAGAQVLAGNDSLMSLNLDDNEIGDD 489

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL     ++  +L  L++ +N I   GA H+A+      +L  ++L  N IG EGAE
Sbjct: 490 GTAAL-----AQHPRLTSLNLASNRIGPTGAQHLAK----SATLTELDLSENRIGPEGAE 540

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
               AL  +  +TT+++ GN I   GA A A   + ++ +TSLD   N +G  GAK L  
Sbjct: 541 ----ALSLSTVLTTLNVSGNAIGEAGARAFA---EKSTSLTSLDARNNRMGEAGAKMLEA 593

Query: 466 VLKFHG 471
             +  G
Sbjct: 594 NTRLTG 599


>gi|301104398|ref|XP_002901284.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262101218|gb|EEY59270.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1160

 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 127/235 (54%), Gaps = 3/235 (1%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           L+L    L D   + + ++L +  S LR L+L  N +  +G T LAEAL  N+++ SL+L
Sbjct: 103 LKLGGFSLGDACTRVLGDVLAHGASRLRTLDLGFNRLTDTGATHLAEALETNTSLESLYL 162

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           +GN  G  GA ALA+ L  N  LR LHL GN+IG+EG R L  G++     L  L +G N
Sbjct: 163 SGNEIGPAGARALAQALIKNTHLRSLHLSGNNIGEEGARVLADGIAGNT-SLRALYMGTN 221

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIH 428
            I A G   +A  + + KSL  + L  N +G  G   +A A       ++T++LG N + 
Sbjct: 222 GIGATGMQSLATALTHNKSLEELTLGQNKVGSAGVRHLAAAFATGHVALSTLELGKNGVD 281

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            +GA A+AR L   + + +L + +NP+G  GA A   +L  +  +  L L +  +
Sbjct: 282 QEGAIALARSLCGANRLQNLYMDHNPLGDVGASAFGALLAQNTELRVLDLSYTHM 336



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 130/246 (52%), Gaps = 3/246 (1%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L L G  +GD   + L D+L   A   R L L    L D GA  +AE L+ N+ L  L L
Sbjct: 103 LKLGGFSLGDACTRVLGDVLAHGASRLRTLDLGFNRLTDTGATHLAEALETNTSLESLYL 162

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N I  +G  +LA+AL++N+ +RSLHL+GN  G  GA  LA G+ GN SLR L++  N 
Sbjct: 163 SGNEIGPAGARALAQALIKNTHLRSLHLSGNNIGEEGARVLADGIAGNTSLRALYMGTNG 222

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYMNDIG 400
           IG  G+++L + L+  K  L  L +G N + + G  H+A  +     +L  + L  N + 
Sbjct: 223 IGATGMQSLATALTHNK-SLEELTLGQNKVGSAGVRHLAAAFATGHVALSTLELGKNGVD 281

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            EGA  +A +L     +  + +  N +   GASA   +L  N+ +  LDL+Y  +   G 
Sbjct: 282 QEGAIALARSLCGANRLQNLYMDHNPLGDVGASAFGALLAQNTELRVLDLSYTHMSLLGL 341

Query: 461 KALSEV 466
           + LS V
Sbjct: 342 RELSVV 347



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 110/205 (53%), Gaps = 4/205 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L+TL+L  N + D G   L + L  N  +E L LS  ++   GA+A+A+ L  N+ LR L
Sbjct: 129 LRTLDLGFNRLTDTGATHLAEALETNTSLESLYLSGNEIGPAGARALAQALIKNTHLRSL 188

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L+ N I   G   LA+ +  N+++R+L++  N  GA G  +LA  L  NKSL EL L  
Sbjct: 189 HLSGNNIGEEGARVLADGIAGNTSLRALYMGTNGIGATGMQSLATALTHNKSLEELTLGQ 248

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM--N 397
           N +G  G+R L +  ++    L+ L++G N +  +GA  +A  +  C +    NLYM  N
Sbjct: 249 NKVGSAGVRHLAAAFATGHVALSTLELGKNGVDQEGAIALARSL--CGANRLQNLYMDHN 306

Query: 398 DIGDEGAEKIADALKQNRTITTIDL 422
            +GD GA      L QN  +  +DL
Sbjct: 307 PLGDVGASAFGALLAQNTELRVLDL 331



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 4/241 (1%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L G S+GD   R L   L+    +L  LD+G N ++  GA H+AE ++   SL  + L
Sbjct: 103 LKLGGFSLGDACTRVLGDVLAHGASRLRTLDLGFNRLTDTGATHLAEALETNTSLESLYL 162

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N+IG  GA  +A AL +N  + ++ L GNNI  +GA  +A  +  N+ + +L +  N 
Sbjct: 163 SGNEIGPAGARALAQALIKNTHLRSLHLSGNNIGEEGARVLADGIAGNTSLRALYMGTNG 222

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRD 513
           IGA G ++L+  L  + ++  L LG  ++G++G   +A      +  +S L+L  NG+  
Sbjct: 223 IGATGMQSLATALTHNKSLEELTLGQNKVGSAGVRHLAAAFATGHVALSTLELGKNGVDQ 282

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
           EGA  LA+S    N  L ++ +  N + D GA A    L  N ++ V  L+L+   ++  
Sbjct: 283 EGAIALARSLCGANR-LQNLYMDHNPLGDVGASAFGALLAQNTELRV--LDLSYTHMSLL 339

Query: 574 G 574
           G
Sbjct: 340 G 340



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 1/137 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS-NIALKTLNLSG 227
           M     G  G+  LA +L +N++ EE++   N + +AG++       + ++AL TL L  
Sbjct: 218 MGTNGIGATGMQSLATALTHNKSLEELTLGQNKVGSAGVRHLAAAFATGHVALSTLELGK 277

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N +  EG   L   L     ++ L +    L D GA A   LL  N+ LRVL+L+   + 
Sbjct: 278 NGVDQEGAIALARSLCGANRLQNLYMDHNPLGDVGASAFGALLAQNTELRVLDLSYTHMS 337

Query: 288 YSGFTSLAEALLENSTI 304
             G   L+   L  S +
Sbjct: 338 LLGLRELSVVGLARSRV 354


>gi|83748568|ref|ZP_00945588.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
 gi|83724776|gb|EAP71934.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
          Length = 629

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 206/435 (47%), Gaps = 74/435 (17%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + +S+ ++G + GD     LA+S    ++   +  + N I   G +A  G       L +
Sbjct: 216 SLTSLSLTGCSIGDRAATALAQS----RSIASLDLSVNMIGPDGARALAGA-----PLVS 266

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL  N IGDEG   L      +  ++ L  S+  + D G    A+    N++L  L L 
Sbjct: 267 LNLHNNGIGDEGALALAT----SGTLKSLNASNNGIGDAGVLGFAD----NTVLTQLNLA 318

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            NMI  +G    A AL  N+++  L L+ N  G  GA  LA    G++SL  L++  N I
Sbjct: 319 GNMIGPAG----ARALRRNTSLTELDLSTNRLGDAGAQVLA----GSRSLTSLNVRNNEI 370

Query: 343 GDEGIRALMSGLSSRK-------------------GKLAVLDIGNNSISAKGAFHVAEYI 383
           GD+G  AL    + +                      L+ LD+   +I   GA  +A   
Sbjct: 371 GDDGTEALARNTTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASALARNT 430

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
               S+  ++L  N IGD GA  IA      RT+T +DL  NNIH  G    A+VL  N 
Sbjct: 431 ----SVASLHLGSNRIGDSGARAIATI----RTLTLLDLSRNNIHDAG----AQVLAGND 478

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            + SL+L  N IG DG  AL++    H  + +L L   +IG +GA+ +A     + T++ 
Sbjct: 479 SLMSLNLDDNEIGDDGTAALAQ----HPRLTSLNLASNRIGPTGAQHLA----KSATLTE 530

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           LDL  N +  EGA+ L+     ++  LT+++++ N I + GA A A+     +  ++TSL
Sbjct: 531 LDLSENRIGPEGAEALS-----LSTVLTTLNVSGNAIGEAGARAFAE-----KSTSLTSL 580

Query: 564 NLANNFLTKFGQSAL 578
           +  NN + + G   L
Sbjct: 581 DARNNRMGEAGAKML 595



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 197/412 (47%), Gaps = 70/412 (16%)

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
           T +G+      L +   LK+L+L+G  I  EG + L       A +  L L+   + D  
Sbjct: 176 TGSGVSNAGLALLATRPLKSLSLNGIEIDAEGARLLATC----ASLTSLSLTGCSIGDRA 231

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A A+A+    +  +  L+L+ NMI   G  +LA A L      SL+L+ N  G  GA AL
Sbjct: 232 ATALAQ----SRSIASLDLSVNMIGPDGARALAGAPLV-----SLNLHNNGIGDEGALAL 282

Query: 323 AK--------------------GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           A                     G   N  L +L+L GN IG  G RAL      R   L 
Sbjct: 283 ATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMIGPAGARALR-----RNTSLT 337

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            LD+  N +   G    A+ +   +SL  +N+  N+IGD+G E    AL +N T+ +++L
Sbjct: 338 ELDLSTNRLGDAG----AQVLAGSRSLTSLNVRNNEIGDDGTE----ALARNTTLKSLNL 389

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I  +GA A+      N+ ++ LDL    I   GA AL+     + ++ +L LG  +
Sbjct: 390 SYNRIGLQGAGAL----GGNTTLSELDLRACAIDPYGASALAR----NTSVASLHLGSNR 441

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           IG SGA  +A +     T+++LDL  N + D GA+ LA      N++L S++L  NEI D
Sbjct: 442 IGDSGARAIATI----RTLTLLDLSRNNIHDAGAQVLAG-----NDSLMSLNLDDNEIGD 492

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV-YEMSEKEV 593
           DG  A+AQ  +      +TSLNLA+N +   G   L  +  L   ++SE  +
Sbjct: 493 DGTAALAQHPR------LTSLNLASNRIGPTGAQHLAKSATLTELDLSENRI 538



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 161/366 (43%), Gaps = 88/366 (24%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+++     GDEG   LA S     T + ++ + NGI  AG+  F      N  L  LNL
Sbjct: 266 SLNLHNNGIGDEGALALATS----GTLKSLNASNNGIGDAGVLGF----ADNTVLTQLNL 317

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA------------------ 267
           +GN IG  G + L      N  +  L LS+  L D GA+ +A                  
Sbjct: 318 AGNMIGPAGARAL----RRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNVRNNEIGDD 373

Query: 268 --ELLKNNSILRVLELNNNMIDYSGF------TSLAE--------------ALLENSTIR 305
             E L  N+ L+ L L+ N I   G       T+L+E              AL  N+++ 
Sbjct: 374 GTEALARNTTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASALARNTSVA 433

Query: 306 SLHLNGNYGGALGANALA--------------------KGLEGNKSLRELHLHGNSIGDE 345
           SLHL  N  G  GA A+A                    + L GN SL  L+L  N IGD+
Sbjct: 434 SLHLGSNRIGDSGARAIATIRTLTLLDLSRNNIHDAGAQVLAGNDSLMSLNLDDNEIGDD 493

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL     ++  +L  L++ +N I   GA H+A+      +L  ++L  N IG EGAE
Sbjct: 494 GTAAL-----AQHPRLTSLNLASNRIGPTGAQHLAK----SATLTELDLSENRIGPEGAE 544

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
               AL  +  +TT+++ GN I   GA A A   + ++ +TSLD   N +G  GAK L  
Sbjct: 545 ----ALSLSTVLTTLNVSGNAIGEAGARAFA---EKSTSLTSLDARNNRMGEAGAKMLEA 597

Query: 466 VLKFHG 471
             +  G
Sbjct: 598 NTRLTG 603


>gi|308801903|ref|XP_003078265.1| unnamed protein product [Ostreococcus tauri]
 gi|116056716|emb|CAL53005.1| unnamed protein product [Ostreococcus tauri]
          Length = 481

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 175/338 (51%), Gaps = 16/338 (4%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS-----ILRVLELNNN 284
           + ++G + + ++L     ++RL L  V++ D+GA ++AE +K ++      LR L+L +N
Sbjct: 102 VSNDGARAVAEVLAQGWDLKRLALRKVNVSDDGAVSLAEAIKTSADNGTCQLRWLDLGSN 161

Query: 285 MIDYSGFTSLAEALLENSTIR--SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +   G  ++ EAL E+  +R   L L GN   + G  AL KG   + +LR + L  N  
Sbjct: 162 DVRSRGAIAIGEAL-EHPEVRITRLTLRGNGICSEGMEALGKGAGTSATLRRIDLAHNGF 220

Query: 343 GDEGIRALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           GD G+ A    LS      L V+ +G NSI   G   + + +    ++  ++L  N +G 
Sbjct: 221 GDRGVIAFADALSRGAAPNLRVVLLGFNSIGPDGVRALMQALVGT-NVEHLDLGCNVVGA 279

Query: 402 EGAEKIADALKQNRTITTIDLGGNNI----HSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           EG + IAD +   R + +++L  NNI       G  A+++ L+ N+ +  L+L  N + A
Sbjct: 280 EGTKAIADMINSTR-LKSVNLACNNIGLRGDRSGLKALSKALETNTTLEILNLRGNALHA 338

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           D AK +++ L     +  L +G+ ++   GA  +A+ L  N T+  LDL+ N + DEGA 
Sbjct: 339 DCAKDIADFLLEETALIQLNVGYNELYDEGAWEIAEALEENGTVVGLDLQRNEITDEGAG 398

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            +A++   VNE +  IDL  N I  DG   +A +   N
Sbjct: 399 YIAKTLS-VNEVIQEIDLRSNMIGPDGVEKLASSSPRN 435



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 167/331 (50%), Gaps = 19/331 (5%)

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL---VDNAGVE--RLQLSSVDLRD 260
           G +A   VL     LK L L    + D+G   L + +    DN   +   L L S D+R 
Sbjct: 106 GARAVAEVLAQGWDLKRLALRKVNVSDDGAVSLAEAIKTSADNGTCQLRWLDLGSNDVRS 165

Query: 261 EGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG- 318
            GA AI E L++  + +  L L  N I   G  +L +    ++T+R + L  N  G  G 
Sbjct: 166 RGAIAIGEALEHPEVRITRLTLRGNGICSEGMEALGKGAGTSATLRRIDLAHNGFGDRGV 225

Query: 319 ---ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
              A+AL++G   N  LR + L  NSIG +G+RALM  L      +  LD+G N + A+G
Sbjct: 226 IAFADALSRGAAPN--LRVVLLGFNSIGPDGVRALMQALVGTN--VEHLDLGCNVVGAEG 281

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIG----DEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
              +A+ I N   L  +NL  N+IG      G + ++ AL+ N T+  ++L GN +H+  
Sbjct: 282 TKAIADMI-NSTRLKSVNLACNNIGLRGDRSGLKALSKALETNTTLEILNLRGNALHADC 340

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A  IA  L + + +  L++ YN +  +GA  ++E L+ +G +  L L   +I   GA ++
Sbjct: 341 AKDIADFLLEETALIQLNVGYNELYDEGAWEIAEALEENGTVVGLDLQRNEITDEGAGYI 400

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           A  L  N  I  +DLR+N +  +G + LA S
Sbjct: 401 AKTLSVNEVIQEIDLRSNMIGPDGVEKLASS 431



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 154/303 (50%), Gaps = 13/303 (4%)

Query: 173 NFGDEGLFFLAESL---GYNQTAE--EVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLS 226
           N  D+G   LAE++     N T +   +   +N + + G  A    L+   + +  L L 
Sbjct: 129 NVSDDGAVSLAEAIKTSADNGTCQLRWLDLGSNDVRSRGAIAIGEALEHPEVRITRLTLR 188

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI--LRVLELNNN 284
           GN I  EG++ L      +A + R+ L+     D G  A A+ L   +   LRV+ L  N
Sbjct: 189 GNGICSEGMEALGKGAGTSATLRRIDLAHNGFGDRGVIAFADALSRGAAPNLRVVLLGFN 248

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G  +L +AL+  + +  L L  N  GA G  A+A  +   + L+ ++L  N+IG 
Sbjct: 249 SIGPDGVRALMQALV-GTNVEHLDLGCNVVGAEGTKAIADMINSTR-LKSVNLACNNIGL 306

Query: 345 EGIRALMSGLS---SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            G R+ +  LS        L +L++  N++ A  A  +A+++    +L+ +N+  N++ D
Sbjct: 307 RGDRSGLKALSKALETNTTLEILNLRGNALHADCAKDIADFLLEETALIQLNVGYNELYD 366

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA +IA+AL++N T+  +DL  N I  +GA  IA+ L  N VI  +DL  N IG DG +
Sbjct: 367 EGAWEIAEALEENGTVVGLDLQRNEITDEGAGYIAKTLSVNEVIQEIDLRSNMIGPDGVE 426

Query: 462 ALS 464
            L+
Sbjct: 427 KLA 429



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 161/332 (48%), Gaps = 46/332 (13%)

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL---LENST--IRSLHL 309
           S+ + ++GA+A+AE+L     L+ L L    +   G  SLAEA+    +N T  +R L L
Sbjct: 99  SLRVSNDGARAVAEVLAQGWDLKRLALRKVNVSDDGAVSLAEAIKTSADNGTCQLRWLDL 158

Query: 310 NGNYGGALGANALAKGLEGNK-SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
             N   + GA A+ + LE  +  +  L L GN I  EG+ AL                  
Sbjct: 159 GSNDVRSRGAIAIGEALEHPEVRITRLTLRGNGICSEGMEAL------------------ 200

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN--RTITTIDLGGNN 426
                KGA   A       +L  I+L  N  GD G    ADAL +     +  + LG N+
Sbjct: 201 ----GKGAGTSA-------TLRRIDLAHNGFGDRGVIAFADALSRGAAPNLRVVLLGFNS 249

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG-- 484
           I   G  A+ + L   +V   LDL  N +GA+G KA+++++     + ++ L    IG  
Sbjct: 250 IGPDGVRALMQALVGTNV-EHLDLGCNVVGAEGTKAIADMIN-STRLKSVNLACNNIGLR 307

Query: 485 --ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
              SG + ++  L  N T+ IL+LR N L  + AK +A  F +   AL  +++ +NE+ D
Sbjct: 308 GDRSGLKALSKALETNTTLEILNLRGNALHADCAKDIAD-FLLEETALIQLNVGYNELYD 366

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           +GA+ IA+AL+  E+  V  L+L  N +T  G
Sbjct: 367 EGAWEIAEALE--ENGTVVGLDLQRNEITDEG 396



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 128/257 (49%), Gaps = 9/257 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA--LK 221
            + + + G     EG+  L +  G + T   +  A NG    G+ AF   L    A  L+
Sbjct: 182 ITRLTLRGNGICSEGMEALGKGAGTSATLRRIDLAHNGFGDRGVIAFADALSRGAAPNLR 241

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            + L  N IG +GV+ L   LV    VE L L    +  EG KAIA+++ N++ L+ + L
Sbjct: 242 VVLLGFNSIGPDGVRALMQALV-GTNVEHLDLGCNVVGAEGTKAIADMI-NSTRLKSVNL 299

Query: 282 NNNMI----DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             N I    D SG  +L++AL  N+T+  L+L GN   A  A  +A  L    +L +L++
Sbjct: 300 ACNNIGLRGDRSGLKALSKALETNTTLEILNLRGNALHADCAKDIADFLLEETALIQLNV 359

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             N + DEG   +   L    G +  LD+  N I+ +GA ++A+ +   + +  I+L  N
Sbjct: 360 GYNELYDEGAWEIAEALEE-NGTVVGLDLQRNEITDEGAGYIAKTLSVNEVIQEIDLRSN 418

Query: 398 DIGDEGAEKIADALKQN 414
            IG +G EK+A +  +N
Sbjct: 419 MIGPDGVEKLASSSPRN 435



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 4/143 (2%)

Query: 164 FSSVDMSGRNFG----DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
             SV+++  N G      GL  L+++L  N T E ++   N + A   K     L    A
Sbjct: 294 LKSVNLACNNIGLRGDRSGLKALSKALETNTTLEILNLRGNALHADCAKDIADFLLEETA 353

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  LN+  N + DEG   + + L +N  V  L L   ++ DEGA  IA+ L  N +++ +
Sbjct: 354 LIQLNVGYNELYDEGAWEIAEALEENGTVVGLDLQRNEITDEGAGYIAKTLSVNEVIQEI 413

Query: 280 ELNNNMIDYSGFTSLAEALLENS 302
           +L +NMI   G   LA +   N+
Sbjct: 414 DLRSNMIGPDGVEKLASSSPRNT 436


>gi|156392783|ref|XP_001636227.1| predicted protein [Nematostella vectensis]
 gi|156223328|gb|EDO44164.1| predicted protein [Nematostella vectensis]
          Length = 375

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 177/356 (49%), Gaps = 33/356 (9%)

Query: 141 GFTGK-LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
           G  G+ +  E+ + L E  +     + + +   N GD G   +A  L  N T +++    
Sbjct: 23  GIIGRNMTPEAGRALGEMLRHNTTITCLSLFHGNIGDSGALSIASGLSKNTTLDKIEIEN 82

Query: 200 NGITAAGIKAFDGVLQ-SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
           + I A G+ A    +Q +N  L T+++S N +GD     L  +LVDN  +  + +    L
Sbjct: 83  SCIGATGVSALAEFIQNNNSTLSTIDISVNSLGDACASELAKVLVDNTSLNVVYIGGKYL 142

Query: 259 RDEGAKAIAELLKNNSILRVLELNN-NMIDYSGFTSLAEALLENSTIRSLHL-NGNYGGA 316
            D G  +IAE LK N+ +R L +   NM   +G  +L E L  N+TI  L L NGN G +
Sbjct: 143 GDAGVASIAEALKVNTTVRKLGIKGRNMTPEAGR-ALGEMLKHNTTITCLSLVNGNIGDS 201

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM------------------SGLSSRK 358
            GA ++A GL  N +L ++ +  + IG  G+ AL                   +G++S  
Sbjct: 202 -GALSIASGLSQNTTLEKIQIVNSCIGATGVSALAKVIQNATHLDLSRNIIGDAGVASIA 260

Query: 359 GKLAV------LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
             L V      L I  ++++ +    + E +K+  ++  ++L   +IGD GA  IA  L 
Sbjct: 261 EALMVNTTVRALGIRGDNMTPEAGQALGEMLKHNTTITCLSLVNGNIGDSGALSIASGLS 320

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           QN T+  I +  + I + G SA+ +V+++    T LDL+ N IG  GAKA+S+V++
Sbjct: 321 QNTTLDKIQIDNSCIGATGVSALTKVIQN---ATHLDLSKNIIGTKGAKAISKVIE 373



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 189/380 (49%), Gaps = 19/380 (5%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG+ +    L+ N  ++TL + G  +  E  + L ++L  N  +  L L   ++ D GA 
Sbjct: 4   AGVASIAEALKVNTTVRTLGIIGRNMTPEAGRALGEMLRHNTTITCLSLFHGNIGDSGAL 63

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALA 323
           +IA  L  N+ L  +E+ N+ I  +G ++LAE +   NST+ ++ ++ N  G   A+ LA
Sbjct: 64  SIASGLSKNTTLDKIEIENSCIGATGVSALAEFIQNNNSTLSTIDISVNSLGDACASELA 123

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGL----SSRKGKLAVLDIGNNSISAKGAFHV 379
           K L  N SL  +++ G  +GD G+ ++   L    + RK     L I   +++ +    +
Sbjct: 124 KVLVDNTSLNVVYIGGKYLGDAGVASIAEALKVNTTVRK-----LGIKGRNMTPEAGRAL 178

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E +K+  ++  ++L   +IGD GA  IA  L QN T+  I +  + I + G SA+A+V+
Sbjct: 179 GEMLKHNTTITCLSLVNGNIGDSGALSIASGLSQNTTLEKIQIVNSCIGATGVSALAKVI 238

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           ++    T LDL+ N IG  G  +++E L  +  +  L +    +     + + +ML++N 
Sbjct: 239 QN---ATHLDLSRNIIGDAGVASIAEALMVNTTVRALGIRGDNMTPEAGQALGEMLKHNT 295

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
           TI+ L L    + D GA  +A      N  L  I +  + I   G  A+ + ++      
Sbjct: 296 TITCLSLVNGNIGDSGALSIASGLS-QNTTLDKIQIDNSCIGATGVSALTKVIQ-----N 349

Query: 560 VTSLNLANNFLTKFGQSALT 579
            T L+L+ N +   G  A++
Sbjct: 350 ATHLDLSKNIIGTKGAKAIS 369



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 169/351 (48%), Gaps = 8/351 (2%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +GD GV  + + L  N  V  L +   ++  E  +A+ E+L++N+ +  L L +  I  S
Sbjct: 1   LGDAGVASIAEALKVNTTVRTLGIIGRNMTPEAGRALGEMLRHNTTITCLSLFHGNIGDS 60

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIR 348
           G  S+A  L +N+T+  + +  +  GA G +ALA+ ++ N S L  + +  NS+GD    
Sbjct: 61  GALSIASGLSKNTTLDKIEIENSCIGATGVSALAEFIQNNNSTLSTIDISVNSLGDACAS 120

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            L   L      L V+ IG   +   G   +AE +K   ++  + +   ++  E    + 
Sbjct: 121 ELAKVLVDNT-SLNVVYIGGKYLGDAGVASIAEALKVNTTVRKLGIKGRNMTPEAGRALG 179

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           + LK N TIT + L   NI   GA +IA  L  N+ +  + +  + IGA G  AL++V++
Sbjct: 180 EMLKHNTTITCLSLVNGNIGDSGALSIASGLSQNTTLEKIQIVNSCIGATGVSALAKVIQ 239

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
              N   L L    IG +G   +A+ L  N T+  L +R + +  E  + L +  K  N 
Sbjct: 240 ---NATHLDLSRNIIGDAGVASIAEALMVNTTVRALGIRGDNMTPEAGQALGEMLK-HNT 295

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
            +T + L    I D GA +IA  L  N    +  + + N+ +   G SALT
Sbjct: 296 TITCLSLVNGNIGDSGALSIASGLSQN--TTLDKIQIDNSCIGATGVSALT 344


>gi|66814688|ref|XP_641523.1| hypothetical protein DDB_G0279741 [Dictyostelium discoideum AX4]
 gi|60469560|gb|EAL67550.1| hypothetical protein DDB_G0279741 [Dictyostelium discoideum AX4]
          Length = 1084

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 158/346 (45%), Gaps = 30/346 (8%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNL G   G + +K   +IL  N  +  L LSS  L +     +A+ +K N+ ++ L ++
Sbjct: 482 LNLDGINFGKKALKSFLNILARNQDLTELDLSSNQLCESNGTYLADFIKRNNSIQTLSIS 541

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           NN   Y     +AE+L  N +I S +L+      L    LAK L  N +L++L L    +
Sbjct: 542 NNDF-YEKAVDIAESLQYNKSITSFNLSHTKCSNLIGRVLAKSLCINHTLKKLILSHTKM 600

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
              GI     GL   K +L  L                            NL   D+ D+
Sbjct: 601 SCAGIVEFAQGLKENKIQLESL----------------------------NLDDTDLQDK 632

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA +I +A++ N  +T + L  N+I S GA +I + LK NS +  L L YN IG  G  +
Sbjct: 633 GATEIGEAIRSNTHLTHLYLNSNSILSSGAKSIGKALKHNSTLKVLHLGYNEIGVKGLDS 692

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           +S+ LK +  +  L +    I   G   + D L+ N  +  ++LR N L  +G   +++ 
Sbjct: 693 ISKSLKTNKTLIELSVKNNLIPEKGGIVLTDSLKSNQKLETINLRGNFLGIKGGAAISK- 751

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
               N+ LT++DL+ N +  D    I Q LK N+    T+L    N
Sbjct: 752 LLTTNQTLTNMDLSHNNLDKDVIHKIHQLLKKNQITNSTNLTAQTN 797



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 140/276 (50%), Gaps = 3/276 (1%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L +F K   +  ++ +S  +F ++ +  +AESL YN++    + +    +    +     
Sbjct: 525 LADFIKRNNSIQTLSISNNDFYEKAVD-IAESLQYNKSITSFNLSHTKCSNLIGRVLAKS 583

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA-GVERLQLSSVDLRDEGAKAIAELLKN 272
           L  N  LK L LS   +   G+      L +N   +E L L   DL+D+GA  I E +++
Sbjct: 584 LCINHTLKKLILSHTKMSCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRS 643

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  L LN+N I  SG  S+ +AL  NST++ LHL  N  G  G ++++K L+ NK+L
Sbjct: 644 NTHLTHLYLNSNSILSSGAKSIGKALKHNSTLKVLHLGYNEIGVKGLDSISKSLKTNKTL 703

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            EL +  N I ++G   L   L S + KL  +++  N +  KG   +++ +   ++L  +
Sbjct: 704 IELSVKNNLIPEKGGIVLTDSLKSNQ-KLETINLRGNFLGIKGGAAISKLLTTNQTLTNM 762

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           +L  N++  +   KI   LK+N+   + +L     H
Sbjct: 763 DLSHNNLDKDVIHKIHQLLKKNQITNSTNLTAQTNH 798



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 49/259 (18%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL-HGNSIGD-EGIRALMSGLSS 356
           L+  +++++HL  N    L +  +++ L+   S+  L+L H  SI + E   AL   L +
Sbjct: 172 LKYGSLQTVHLRLNTPQELVS--ISEALKQRHSIVHLNLSHNKSIKELESWIALGLALKA 229

Query: 357 RKGKLAVLDIGNNSISAKG-AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
               L+ L++ +NS+  +G +  +++ IK  +S+ W+NL  N++  +    I DAL  N+
Sbjct: 230 PNQTLSQLNLSHNSLGTEGLSLIISDIIKTNRSITWLNLSHNNLDQDDDHSIMDALLYNQ 289

Query: 416 TITTIDLGGN-----------------------------NIHSKGASAIARVLKDNSVIT 446
           TI T+DL  N                             N +    S I+R L+ N  + 
Sbjct: 290 TIQTLDLSNNEYQLTLDISNRLNSFIENCQSITHLNFSRNSNRHPISGISRALQINQSLR 349

Query: 447 SLDLAYNPIGADGAKALSEVL---KFHGNINTLKLGWCQIGASGAEFVADML--RYNNTI 501
            +DL++  I    +  L + L   +F  +IN  +     +G +    + + L  RYN+  
Sbjct: 350 HIDLSFMSIAPQESTELIKTLIGSRFLTSINLQQTLLSTVGETFGISIVNSLAKRYND-- 407

Query: 502 SILDLRANGLRDEGAKCLA 520
              DL      DE   CL+
Sbjct: 408 --YDL------DEEDGCLS 418



 Score = 43.1 bits (100), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 156/365 (42%), Gaps = 60/365 (16%)

Query: 245 NAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           N  + +L LS   L  EG +  I++++K N  +  L L++N +D     S+ +ALL N T
Sbjct: 231 NQTLSQLNLSHNSLGTEGLSLIISDIIKTNRSITWLNLSHNNLDQDDDHSIMDALLYNQT 290

Query: 304 IRSLHLNGN-YGGALG-ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR---K 358
           I++L L+ N Y   L  +N L   +E  +S+  L+   NS      R  +SG+S      
Sbjct: 291 IQTLDLSNNEYQLTLDISNRLNSFIENCQSITHLNFSRNS-----NRHPISGISRALQIN 345

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL---YMNDIGDEGAEKIADAL---- 411
             L  +D+   SI+ + +  + + +   + L  INL    ++ +G+     I ++L    
Sbjct: 346 QSLRHIDLSFMSIAPQESTELIKTLIGSRFLTSINLQQTLLSTVGETFGISIVNSLAKRY 405

Query: 412 ------KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD---------------- 449
                 +++  ++ +D   +   +   +     L  NS  TS +                
Sbjct: 406 NDYDLDEEDGCLSFVDSKSSTTTTTNTNTTTIPLDPNSQNTSANSICFTPSCSFSSSKSS 465

Query: 450 --------LAYNPI----------GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
                     +NPI          G    K+   +L  + ++  L L   Q+  S   ++
Sbjct: 466 LEDDEFYIAPHNPILNLNLDGINFGKKALKSFLNILARNQDLTELDLSSNQLCESNGTYL 525

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
           AD ++ NN+I  L +  N    E A  +A+S +  N+++TS +L+  +  +     +A++
Sbjct: 526 ADFIKRNNSIQTLSISNNDFY-EKAVDIAESLQ-YNKSITSFNLSHTKCSNLIGRVLAKS 583

Query: 552 LKANE 556
           L  N 
Sbjct: 584 LCINH 588



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 4/141 (2%)

Query: 217 NIALKTLNLSGNPIGDEGVK-CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           N  L  LNLS N +G EG+   + DI+  N  +  L LS  +L  +   +I + L  N  
Sbjct: 231 NQTLSQLNLSHNSLGTEGLSLIISDIIKTNRSITWLNLSHNNLDQDDDHSIMDALLYNQT 290

Query: 276 LRVLELNNNMIDYS-GFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           ++ L+L+NN    +   ++   + +EN  +I  L+ + N       + +++ L+ N+SLR
Sbjct: 291 IQTLDLSNNEYQLTLDISNRLNSFIENCQSITHLNFSRN-SNRHPISGISRALQINQSLR 349

Query: 334 ELHLHGNSIGDEGIRALMSGL 354
            + L   SI  +    L+  L
Sbjct: 350 HIDLSFMSIAPQESTELIKTL 370


>gi|348672500|gb|EGZ12320.1| hypothetical protein PHYSODRAFT_514884 [Phytophthora sojae]
          Length = 684

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 162/338 (47%), Gaps = 12/338 (3%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           T NE  K+ R   +V++SGR        FL + + ++     V+  +  I  A  +A   
Sbjct: 280 TANE--KDHRDLVTVNLSGRPLELYEAAFLGKKMLHHLHLGRVALNSCMIDGAAARALAD 337

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            ++++  L TL L  NP+G  G + L + L  ++ +  L LS   L D+G  A  E L  
Sbjct: 338 GVRNHATLHTLELENNPLGPTGGQALAECLAVSSALTYLNLSWTQLGDDGVMAFREALTR 397

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N  +  L+L  N +   G  ++AE L   +T+R LHL  N     GA ALA  LE N+SL
Sbjct: 398 NKSIERLDLRGNELRVRGVVAIAEGLRRTATLRELHLRWNTVSPAGAEALAVALEVNQSL 457

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS---------ISAKGAFHVAEYI 383
             L +  +++G  G  A  S L+  K    +   G +S         IS++ A  +AE +
Sbjct: 458 HLLDIEHHTMGARGAAAFASMLARNKHLEHLNMCGTDSDDALDAGPGISSEQAQRIAEAL 517

Query: 384 KNC-KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
            N  +SL  +++  N I  + A +  + LK N+T+  +DL  + + +K A      L  N
Sbjct: 518 ANSNRSLRILHVGANRIDTDAAARFGELLKFNKTLVALDLSRSGLDAKKAPRFFACLSVN 577

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           + +  L+LAYN IG +G  A    L+ +  +  L L +
Sbjct: 578 TTLERLNLAYNRIGNEGLVACMRALETNRTLRELSLAY 615



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 16/252 (6%)

Query: 328 GNKSLRELHL-----HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           G K L  LHL     +   I     RAL  G+ +    L  L++ NN +   G   +AE 
Sbjct: 308 GKKMLHHLHLGRVALNSCMIDGAAARALADGVRN-HATLHTLELENNPLGPTGGQALAEC 366

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +    +L ++NL    +GD+G     +AL +N++I  +DL GN +  +G  AIA  L+  
Sbjct: 367 LAVSSALTYLNLSWTQLGDDGVMAFREALTRNKSIERLDLRGNELRVRGVVAIAEGLRRT 426

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +  L L +N +   GA+AL+  L+ + +++ L +    +GA GA   A ML  N  + 
Sbjct: 427 ATLRELHLRWNTVSPAGAEALAVALEVNQSLHLLDIEHHTMGARGAAAFASMLARNKHLE 486

Query: 503 ILDLRAN----------GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
            L++             G+  E A+ +A++    N +L  + +  N I  D A    + L
Sbjct: 487 HLNMCGTDSDDALDAGPGISSEQAQRIAEALANSNRSLRILHVGANRIDTDAAARFGELL 546

Query: 553 KANEDVAVTSLN 564
           K N+ +    L+
Sbjct: 547 KFNKTLVALDLS 558



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 189/443 (42%), Gaps = 53/443 (11%)

Query: 167 VDMSGRN--FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           +D++ R+   G +G   L  +L  N+T     F+ N +    +      L+ N AL+ L 
Sbjct: 3   IDLNLRDNRLGAQGAEELGRALRENETLTRCDFSWNQMGPHAVLGLLSALRDNFALRELC 62

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD-----LRDEGAKAIAELLKNNSILRVL 279
           + G  + ++G   L ++  D+A    + L  V+      R  GA+A+  + K  +   + 
Sbjct: 63  VYGRDLAEDGTHYLANLDYDSAKRIVVALRHVNESFAVARLTGARAMLPIDKMKTSRWIH 122

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG-GALGANALAKGLEGNKSLRELHLH 338
             +  +++  G   +A  +  NS + SL L+ N G G      L   +    +LR++ L 
Sbjct: 123 LADRELVELDGLV-IAGLIPRNSMLLSLDLHDNPGLGRAAVLGLLSVIRRCPTLRDVDLS 181

Query: 339 --------GNSIGDEGIRALMSGLSSRKGKLAVLDI----GNN---SISAKGAFHVAEYI 383
                   G S+G+  +  L S L + K    V  +    GN     +    AF VA   
Sbjct: 182 NTGLFPDAGESLGE--LVVLNSTLETIKLHETVFAVQQLRGNRRAGEVPDMMAFTVAS-- 237

Query: 384 KNCKSLL--WI---NLYMNDIGDEGAE-KIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
              K  L  W+    L +N I  E  E ++       +    + +  N            
Sbjct: 238 ---KHFLDFWVLAKCLAVNRITQELNELRLPATSSSAKAAAIVGVTANE----------- 283

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
             KD+  + +++L+  P+    A  L + +  H ++  + L  C I  + A  +AD +R 
Sbjct: 284 --KDHRDLVTVNLSGRPLELYEAAFLGKKMLHHLHLGRVALNSCMIDGAAARALADGVRN 341

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
           + T+  L+L  N L   G + LA+    V+ ALT ++L++ ++ DDG  A  +AL  N+ 
Sbjct: 342 HATLHTLELENNPLGPTGGQALAECL-AVSSALTYLNLSWTQLGDDGVMAFREALTRNK- 399

Query: 558 VAVTSLNLANNFLTKFGQSALTD 580
            ++  L+L  N L   G  A+ +
Sbjct: 400 -SIERLDLRGNELRVRGVVAIAE 421



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 39/78 (50%)

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L+ +NL  N +G +GAE++  AL++N T+T  D   N +       +   L+DN  +  L
Sbjct: 2   LIDLNLRDNRLGAQGAEELGRALRENETLTRCDFSWNQMGPHAVLGLLSALRDNFALREL 61

Query: 449 DLAYNPIGADGAKALSEV 466
            +    +  DG   L+ +
Sbjct: 62  CVYGRDLAEDGTHYLANL 79


>gi|405978624|gb|EKC43001.1| Leucine-rich repeat-containing protein 34 [Crassostrea gigas]
          Length = 425

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 156/300 (52%), Gaps = 5/300 (1%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+   + D+ +  L   L +N  V  L L   ++ DEGAK IA+L++ ++ +R + L +N
Sbjct: 56  LTDKRLVDQDMLVLYKTLQNNLYVTSLDLRFNNITDEGAKHIAKLIEESASIRDINLMSN 115

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G   LA AL  N ++++L L GN  G  G  ALA+ L+ N +L  L +    +  
Sbjct: 116 DIGPEGGEILARALQTNESLKALRLTGNKIGNRGGMALAQMLQVNTTLEALDVADCDLTI 175

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSI---SAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           E + AL + L   K  L  L++    +     +   H A+ +K   S+  I+L   D+ D
Sbjct: 176 ESVIALSTVLHQNK-TLKALNVNRPLLFTQQEETTVHYAKMLKVNTSIEEIHLQKYDMRD 234

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA ++A+ L QN T+  ++L  N I   GA  I++VLK+N+ I  LDL YN +  DGA 
Sbjct: 235 FGATRLAENLMQNNTLKCLNLSCNRITRDGALEISKVLKENTAIEVLDLGYNRLEDDGAC 294

Query: 462 ALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
            ++E LK ++ N+ TL + +  IG  G   +AD L+ N ++  + +  N L +      A
Sbjct: 295 HIAEALKTYNTNLQTLVVSFNNIGNKGLCALADALKVNTSLKQIFIWGNKLEEPATIAFA 354



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 148/306 (48%), Gaps = 6/306 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           +S+D+   N  DEG   +A+ +  + +  +++  +N I   G +     LQ+N +LK L 
Sbjct: 80  TSLDLRFNNITDEGAKHIAKLIEESASIRDINLMSNDIGPEGGEILARALQTNESLKALR 139

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+GN IG+ G   L  +L  N  +E L ++  DL  E   A++ +L  N  L+ L +N  
Sbjct: 140 LTGNKIGNRGGMALAQMLQVNTTLEALDVADCDLTIESVIALSTVLHQNKTLKALNVNRP 199

Query: 285 MI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++           A+ L  N++I  +HL        GA  LA+ L  N +L+ L+L  N 
Sbjct: 200 LLFTQQEETTVHYAKMLKVNTSIEEIHLQKYDMRDFGATRLAENLMQNNTLKCLNLSCNR 259

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMNDIG 400
           I  +G   + S +      + VLD+G N +   GA H+AE +K   + L  + +  N+IG
Sbjct: 260 ITRDGALEI-SKVLKENTAIEVLDLGYNRLEDDGACHIAEALKTYNTNLQTLVVSFNNIG 318

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           ++G   +ADALK N ++  I + GN +      A A +L +N  I   D        DG 
Sbjct: 319 NKGLCALADALKVNTSLKQIFIWGNKLEEPATIAFASLL-ENGRIEPQDTDIRSYVVDGV 377

Query: 461 KALSEV 466
             L E+
Sbjct: 378 TKLCEL 383



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N+I+ +GA H+A+ I+   S+  INL  NDIG EG E +A AL+ N ++  + L 
Sbjct: 82  LDLRFNNITDEGAKHIAKLIEESASIRDINLMSNDIGPEGGEILARALQTNESLKALRLT 141

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I ++G  A+A++L+ N+ + +LD+A   +  +   ALS VL  +  +  L +    +
Sbjct: 142 GNKIGNRGGMALAQMLQVNTTLEALDVADCDLTIESVIALSTVLHQNKTLKALNVNRPLL 201

Query: 484 GASGAE---FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
                E     A ML+ N +I  + L+   +RD GA  LA++  + N  L  ++L+ N I
Sbjct: 202 FTQQEETTVHYAKMLKVNTSIEEIHLQKYDMRDFGATRLAENL-MQNNTLKCLNLSCNRI 260

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             DGA  I++ LK  E+ A+  L+L  N L   G   + +A
Sbjct: 261 TRDGALEISKVLK--ENTAIEVLDLGYNRLEDDGACHIAEA 299



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 144/306 (47%), Gaps = 32/306 (10%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+   L D+    + + L+NN  +  L+L  N I   G   +A+ + E+++IR ++L  N
Sbjct: 56  LTDKRLVDQDMLVLYKTLQNNLYVTSLDLRFNNITDEGAKHIAKLIEESASIRDINLMSN 115

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G  G   LA+ L+ N+SL+ L L GN IG+ G  AL   L      L  LD+ +  ++
Sbjct: 116 DIGPEGGEILARALQTNESLKALRLTGNKIGNRGGMALAQMLQVNT-TLEALDVADCDLT 174

Query: 373 AKGAFHVAEYIKNCKSLLWINL---YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +    ++  +   K+L  +N+    +    +E     A  LK N +I  I L   ++  
Sbjct: 175 IESVIALSTVLHQNKTLKALNVNRPLLFTQQEETTVHYAKMLKVNTSIEEIHLQKYDMRD 234

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA+ +A  L  N+ +  L+L+ N I  DGA  +S+VLK                     
Sbjct: 235 FGATRLAENLMQNNTLKCLNLSCNRITRDGALEISKVLK--------------------- 273

Query: 490 FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
                   N  I +LDL  N L D+GA  +A++ K  N  L ++ ++FN I + G  A+A
Sbjct: 274 -------ENTAIEVLDLGYNRLEDDGACHIAEALKTYNTNLQTLVVSFNNIGNKGLCALA 326

Query: 550 QALKAN 555
            ALK N
Sbjct: 327 DALKVN 332



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 164/330 (49%), Gaps = 8/330 (2%)

Query: 146 LFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           L +E ++T+ EF + +  + + +   ++ +   D+ +  L ++L  N     +    N I
Sbjct: 30  LEKEKEETVFEFKENMHLYLAGNNQLLTDKRLVDQDMLVLYKTLQNNLYVTSLDLRFNNI 89

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
           T  G K    +++ + +++ +NL  N IG EG + L   L  N  ++ L+L+   + + G
Sbjct: 90  TDEGAKHIAKLIEESASIRDINLMSNDIGPEGGEILARALQTNESLKALRLTGNKIGNRG 149

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA- 321
             A+A++L+ N+ L  L++ +  +      +L+  L +N T+++L++N            
Sbjct: 150 GMALAQMLQVNTTLEALDVADCDLTIESVIALSTVLHQNKTLKALNVNRPLLFTQQEETT 209

Query: 322 --LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
              AK L+ N S+ E+HL    + D G   L   L  +   L  L++  N I+  GA  +
Sbjct: 210 VHYAKMLKVNTSIEEIHLQKYDMRDFGATRLAENLM-QNNTLKCLNLSCNRITRDGALEI 268

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARV 438
           ++ +K   ++  ++L  N + D+GA  IA+ALK  N  + T+ +  NNI +KG  A+A  
Sbjct: 269 SKVLKENTAIEVLDLGYNRLEDDGACHIAEALKTYNTNLQTLVVSFNNIGNKGLCALADA 328

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           LK N+ +  + +  N +      A + +L+
Sbjct: 329 LKVNTSLKQIFIWGNKLEEPATIAFASLLE 358


>gi|260804601|ref|XP_002597176.1| hypothetical protein BRAFLDRAFT_66304 [Branchiostoma floridae]
 gi|229282439|gb|EEN53188.1| hypothetical protein BRAFLDRAFT_66304 [Branchiostoma floridae]
          Length = 596

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 131/251 (52%), Gaps = 1/251 (0%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           I  + LN+    +G  G KC+   L  N  +ERL L    +  EGA+ +A++LK N  + 
Sbjct: 61  ITERELNMDHYGLGPTGTKCIATALTINTFIERLSLEDNWMTGEGAEYMADMLKENPSIT 120

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            + L NN +   G  ++ + L+EN ++R ++L  N      A   A  ++ N+ + EL+L
Sbjct: 121 DINLANNRLGTEGAEAMGDMLVENGSLRRVNLAENKFSDRDAMFFAGAMQNNRHMEELNL 180

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            GN   + G   + +G+ + +  +  L++  N +  KG F +   I++  +L W+++  N
Sbjct: 181 SGNEFSEVGGGFMGAGIGANE-TITALNLSWNHLRQKGVFALCRGIRSNNTLQWLDVSWN 239

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
              DEGA  +A  LK N  +T IDL  N I SKGA  +A+ L  N  + +L L  NPI  
Sbjct: 240 GFDDEGASGLATVLKYNEVLTYIDLTNNRITSKGAMKMAKALFINKTLQTLRLGKNPIDM 299

Query: 458 DGAKALSEVLK 468
           DG+  L + ++
Sbjct: 300 DGSLQLLKAIR 310



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 141/296 (47%), Gaps = 30/296 (10%)

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           R L +++  +  +G   +A AL  N+ I  L L  N+    GA  +A  L+ N S+ +++
Sbjct: 64  RELNMDHYGLGPTGTKCIATALTINTFIERLSLEDNWMTGEGAEYMADMLKENPSITDIN 123

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N +G EG  A M  +    G L  +++  N  S + A   A  ++N + +  +NL  
Sbjct: 124 LANNRLGTEGAEA-MGDMLVENGSLRRVNLAENKFSDRDAMFFAGAMQNNRHMEELNLSG 182

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N+  + G   +   +  N TIT ++L  N++  KG  A+ R ++ N+ +  LD+++N   
Sbjct: 183 NEFSEVGGGFMGAGIGANETITALNLSWNHLRQKGVFALCRGIRSNNTLQWLDVSWNGFD 242

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            +GA  L+ VLK                            YN  ++ +DL  N +  +GA
Sbjct: 243 DEGASGLATVLK----------------------------YNEVLTYIDLTNNRITSKGA 274

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
             +A++   +N+ L ++ L  N I  DG+  + +A++ NE   +  L+L +  L++
Sbjct: 275 MKMAKAL-FINKTLQTLRLGKNPIDMDGSLQLLKAIRGNEQSGMHVLDLTDVLLSQ 329



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 1/248 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++M     G  G   +A +L  N   E +S   N +T  G +    +L+ N ++  +NL+
Sbjct: 66  LNMDHYGLGPTGTKCIATALTINTFIERLSLEDNWMTGEGAEYMADMLKENPSITDINLA 125

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N +G EG + + D+LV+N  + R+ L+     D  A   A  ++NN  +  L L+ N  
Sbjct: 126 NNRLGTEGAEAMGDMLVENGSLRRVNLAENKFSDRDAMFFAGAMQNNRHMEELNLSGNEF 185

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   +   +  N TI +L+L+ N+    G  AL +G+  N +L+ L +  N   DEG
Sbjct: 186 SEVGGGFMGAGIGANETITALNLSWNHLRQKGVFALCRGIRSNNTLQWLDVSWNGFDDEG 245

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
              L + L   +  L  +D+ NN I++KGA  +A+ +   K+L  + L  N I  +G+ +
Sbjct: 246 ASGLATVLKYNE-VLTYIDLTNNRITSKGAMKMAKALFINKTLQTLRLGKNPIDMDGSLQ 304

Query: 407 IADALKQN 414
           +  A++ N
Sbjct: 305 LLKAIRGN 312



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 13/216 (6%)

Query: 129 NWSVGAGTNLLSGF-------------TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFG 175
           NW  G G   ++                 +L  E  + + +   E  +   V+++   F 
Sbjct: 99  NWMTGEGAEYMADMLKENPSITDINLANNRLGTEGAEAMGDMLVENGSLRRVNLAENKFS 158

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D    F A ++  N+  EE++ + N  +  G       + +N  +  LNLS N +  +GV
Sbjct: 159 DRDAMFFAGAMQNNRHMEELNLSGNEFSEVGGGFMGAGIGANETITALNLSWNHLRQKGV 218

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
             LC  +  N  ++ L +S     DEGA  +A +LK N +L  ++L NN I   G   +A
Sbjct: 219 FALCRGIRSNNTLQWLDVSWNGFDDEGASGLATVLKYNEVLTYIDLTNNRITSKGAMKMA 278

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           +AL  N T+++L L  N     G+  L K + GN+ 
Sbjct: 279 KALFINKTLQTLRLGKNPIDMDGSLQLLKAIRGNEQ 314


>gi|428167726|gb|EKX36680.1| hypothetical protein GUITHDRAFT_155158 [Guillardia theta CCMP2712]
          Length = 350

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 140/282 (49%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           T++L+   IG  G   L D+L  N+ V+ L L    L   GA  IA +L  N+ L+ L+L
Sbjct: 15  TVDLNSERIGPLGAGQLGDLLAHNSTVDGLDLRDTILGAVGATHIARMLHTNTTLQTLDL 74

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N I+  G T+LAEA+  N+T+  L L  N   + GA  +A  L  N SL+ L    N 
Sbjct: 75  ASNAIEDRGATALAEAIKVNNTLVKLELQRNGISSEGARYIADALRQNTSLQYLGFAFNG 134

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            GD G   L   L+ +   L  LD+G N +   GA  +A  +     L  + L  N I D
Sbjct: 135 FGDAGATHLAEVLAGQNTTLKQLDLGFNGVCTDGARALACGLTKNHWLETLELGYNGITD 194

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA ++A A++ N  +T++ +  N I   GA+ +A  L+DN  +  + L+ N IG  GAK
Sbjct: 195 AGALELARAMRTNTVLTSLGVPSNGISDAGAAELANALRDNCTLVQVGLSSNSIGNKGAK 254

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            L++VL  +  + TL L    +   G   VA      NT  I
Sbjct: 255 ELADVLNMNYALETLYLEENDVDEDGEGAVALRKVVKNTFKI 296



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 146/273 (53%), Gaps = 3/273 (1%)

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            ++LN+  I   G   L + L  NST+  L L     GA+GA  +A+ L  N +L+ L L
Sbjct: 15  TVDLNSERIGPLGAGQLGDLLAHNSTVDGLDLRDTILGAVGATHIARMLHTNTTLQTLDL 74

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             N+I D G  AL   +      L  L++  N IS++GA ++A+ ++   SL ++    N
Sbjct: 75  ASNAIEDRGATALAEAIKVNN-TLVKLELQRNGISSEGARYIADALRQNTSLQYLGFAFN 133

Query: 398 DIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
             GD GA  +A+ L  QN T+  +DLG N + + GA A+A  L  N  + +L+L YN I 
Sbjct: 134 GFGDAGATHLAEVLAGQNTTLKQLDLGFNGVCTDGARALACGLTKNHWLETLELGYNGIT 193

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             GA  L+  ++ +  + +L +    I  +GA  +A+ LR N T+  + L +N + ++GA
Sbjct: 194 DAGALELARAMRTNTVLTSLGVPSNGISDAGAAELANALRDNCTLVQVGLSSNSIGNKGA 253

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
           K LA    + N AL ++ L  N++ +DG  A+A
Sbjct: 254 KELADVLNM-NYALETLYLEENDVDEDGEGAVA 285



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 153/330 (46%), Gaps = 40/330 (12%)

Query: 157 FAKELRAFS---SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           + + LR F    +VD++    G  G   L + L +N T + +      + A G      +
Sbjct: 3   WVENLRRFGLQGTVDLNSERIGPLGAGQLGDLLAHNSTVDGLDLRDTILGAVGATHIARM 62

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L +N  L+TL+L+ N I D G   L + +  N  + +L+L    +  EGA+ IA+ L+ N
Sbjct: 63  LHTNTTLQTLDLASNAIEDRGATALAEAIKVNNTLVKLELQRNGISSEGARYIADALRQN 122

Query: 274 SILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           + L+ L    N    +G T LAE L  +N+T++ L L  N     GA ALA GL  N  L
Sbjct: 123 TSLQYLGFAFNGFGDAGATHLAEVLAGQNTTLKQLDLGFNGVCTDGARALACGLTKNHWL 182

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
                                          L++G N I+  GA  +A  ++    L  +
Sbjct: 183 E-----------------------------TLELGYNGITDAGALELARAMRTNTVLTSL 213

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            +  N I D GA ++A+AL+ N T+  + L  N+I +KGA  +A VL  N  + +L L  
Sbjct: 214 GVPSNGISDAGAAELANALRDNCTLVQVGLSSNSIGNKGAKELADVLNMNYALETLYLEE 273

Query: 453 NPIGAD--GAKALSEVLKFHGNINTLKLGW 480
           N +  D  GA AL +V+K     NT K+ W
Sbjct: 274 NDVDEDGEGAVALRKVVK-----NTFKIKW 298



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 98/190 (51%), Gaps = 2/190 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L    IG  GA ++ D L  N T+  +DL    + + GA+ IAR+L  N+ + +LDLA
Sbjct: 16  VDLNSERIGPLGAGQLGDLLAHNSTVDGLDLRDTILGAVGATHIARMLHTNTTLQTLDLA 75

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I   GA AL+E +K +  +  L+L    I + GA ++AD LR N ++  L    NG 
Sbjct: 76  SNAIEDRGATALAEAIKVNNTLVKLELQRNGISSEGARYIADALRQNTSLQYLGFAFNGF 135

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            D GA  LA+     N  L  +DL FN +  DGA A+A  L  N    + +L L  N +T
Sbjct: 136 GDAGATHLAEVLAGQNTTLKQLDLGFNGVCTDGARALACGLTKNH--WLETLELGYNGIT 193

Query: 572 KFGQSALTDA 581
             G   L  A
Sbjct: 194 DAGALELARA 203



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 123/226 (54%), Gaps = 4/226 (1%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R G    +D+ +  I   GA  + + + +  ++  ++L    +G  GA  IA  L  N T
Sbjct: 9   RFGLQGTVDLNSERIGPLGAGQLGDLLAHNSTVDGLDLRDTILGAVGATHIARMLHTNTT 68

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           + T+DL  N I  +GA+A+A  +K N+ +  L+L  N I ++GA+ +++ L+ + ++  L
Sbjct: 69  LQTLDLASNAIEDRGATALAEAIKVNNTLVKLELQRNGISSEGARYIADALRQNTSLQYL 128

Query: 477 KLGWCQIGASGAEFVADMLR-YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
              +   G +GA  +A++L   N T+  LDL  NG+  +GA+ LA      N  L +++L
Sbjct: 129 GFAFNGFGDAGATHLAEVLAGQNTTLKQLDLGFNGVCTDGARALACGL-TKNHWLETLEL 187

Query: 536 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            +N I D GA  +A+A++ N    +TSL + +N ++  G + L +A
Sbjct: 188 GYNGITDAGALELARAMRTN--TVLTSLGVPSNGISDAGAAELANA 231



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 3/117 (2%)

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           E L+  G   T+ L   +IG  GA  + D+L +N+T+  LDLR   L   GA  +A+   
Sbjct: 5   ENLRRFGLQGTVDLNSERIGPLGAGQLGDLLAHNSTVDGLDLRDTILGAVGATHIARMLH 64

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             N  L ++DLA N I D GA A+A+A+K N    +  L L  N ++  G   + DA
Sbjct: 65  -TNTTLQTLDLASNAIEDRGATALAEAIKVNN--TLVKLELQRNGISSEGARYIADA 118


>gi|260841272|ref|XP_002613852.1| hypothetical protein BRAFLDRAFT_277514 [Branchiostoma floridae]
 gi|229299242|gb|EEN69861.1| hypothetical protein BRAFLDRAFT_277514 [Branchiostoma floridae]
          Length = 410

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 163/324 (50%), Gaps = 14/324 (4%)

Query: 208 KAFDGVLQSNIALKTLNLSGN-------PIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
           KA +  L       TL+L+GN        + D  +  LC  L ++  V RL L   ++ D
Sbjct: 32  KAHEDYLSEPSDEMTLDLAGNNKLLTDTRLEDRDMVPLCQTLANSTYVSRLDLRYNNITD 91

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           EGAK + +L++ +  LR L +  N I   G   +A  L  N T+  L +NGN  G  G  
Sbjct: 92  EGAKHLGKLIEVSVSLRFLNVMCNDIGPDGAEHIARGLHTNETLTELKVNGNKIGNKGGM 151

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI---SAKGAF 377
             A  L+ N  + +L L    +G E + AL + L   K  L  L++    +     +   
Sbjct: 152 MFASALQINTGVEQLDLGDADLGTESVIALATILHYNKF-LKALNVNRPLLFTHQEETTV 210

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           H+A  +K   +L  I+L   D+ D GAE++ + L++N  ++ +DL  N +   GA  +++
Sbjct: 211 HMANMLKVNTTLREIHLQKYDMRDFGAERLVETLQENIALSYLDLSCNRVTRDGAKHLSK 270

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLR 496
           +LK N+ +  LDL +N I  DGA  LSE LK F+ N++TL L    I  +G   VAD ++
Sbjct: 271 LLKKNTPLQVLDLGFNRIEDDGAIYLSEALKHFNTNLHTLVLTHNCIRGNGLVAVADAMK 330

Query: 497 YNNTISILDLRANGLRDEGAKCLA 520
            N+T+  + +  N L  E + C+A
Sbjct: 331 TNSTLYSVFIWGNEL--EESACVA 352



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 121/221 (54%), Gaps = 6/221 (2%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N+I+ +GA H+ + I+   SL ++N+  NDIG +GAE IA  L  N T+T + + 
Sbjct: 82  LDLRYNNITDEGAKHLGKLIEVSVSLRFLNVMCNDIGPDGAEHIARGLHTNETLTELKVN 141

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I +KG    A  L+ N+ +  LDL    +G +   AL+ +L ++  +  L +    +
Sbjct: 142 GNKIGNKGGMMFASALQINTGVEQLDLGDADLGTESVIALATILHYNKFLKALNVNRPLL 201

Query: 484 GASGAE---FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
                E    +A+ML+ N T+  + L+   +RD GA+ L ++ +  N AL+ +DL+ N +
Sbjct: 202 FTHQEETTVHMANMLKVNTTLREIHLQKYDMRDFGAERLVETLQ-ENIALSYLDLSCNRV 260

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             DGA  +++ LK N  + V  L+L  N +   G   L++A
Sbjct: 261 TRDGAKHLSKLLKKNTPLQV--LDLGFNRIEDDGAIYLSEA 299



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 140/306 (45%), Gaps = 6/306 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S +D+   N  DEG   L + +  + +   ++   N I   G +     L +N  L  L 
Sbjct: 80  SRLDLRYNNITDEGAKHLGKLIEVSVSLRFLNVMCNDIGPDGAEHIARGLHTNETLTELK 139

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           ++GN IG++G       L  N GVE+L L   DL  E   A+A +L  N  L+ L +N  
Sbjct: 140 VNGNKIGNKGGMMFASALQINTGVEQLDLGDADLGTESVIALATILHYNKFLKALNVNRP 199

Query: 285 MI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++          +A  L  N+T+R +HL        GA  L + L+ N +L  L L  N 
Sbjct: 200 LLFTHQEETTVHMANMLKVNTTLREIHLQKYDMRDFGAERLVETLQENIALSYLDLSCNR 259

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMNDIG 400
           +  +G + L S L  +   L VLD+G N I   GA +++E +K+  + L  + L  N I 
Sbjct: 260 VTRDGAKHL-SKLLKKNTPLQVLDLGFNRIEDDGAIYLSEALKHFNTNLHTLVLTHNCIR 318

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             G   +ADA+K N T+ ++ + GN +      A   +++   + T       P   DG 
Sbjct: 319 GNGLVAVADAMKTNSTLYSVFIWGNELEESACVAFNDLIESARLDTE-QTDVQPYVVDGR 377

Query: 461 KALSEV 466
             LSE+
Sbjct: 378 VYLSEL 383


>gi|431910090|gb|ELK13163.1| Ribonuclease inhibitor [Pteropus alecto]
          Length = 456

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 188/397 (47%), Gaps = 10/397 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIALK 221
            + +++     GD G+  L + L ++ T   +++S    G+T AG     G L+S   L+
Sbjct: 53  LTELNLCNNELGDAGMRLLLQGL-HSPTCKIQKLSVQNCGLTEAGCGVLPGALRSVPTLR 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L LS NP+GD G++ LCD L+D    +ERLQ+   +L     + +A +L+     + L 
Sbjct: 112 ELYLSNNPLGDAGLRLLCDGLLDPQCHIERLQVEYCNLTAASCEPLAAVLRAKREFKELM 171

Query: 281 LNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN +  +G  +L   L ++ S + SL L G          L   +    SL  L L  
Sbjct: 172 VSNNDLGDAGVRALCRGLADSASPLESLRLEGCNLTLASCQDLGSIVASKASLCTLELGD 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL S   +L  L +    I+A G   +   +K   SL  +++  N +
Sbjct: 232 NKLGDAGIAKLCPGLLSPSSQLRTLWLWECDITASGCRDLCRVLKAKGSLKELSVAGNAV 291

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA+ + ++ L  +  + ++        +      + +L  N+ +  L L+ N +G  
Sbjct: 292 GDEGAQLLCESLLAPSCHLESLWAKSCGFTAACCQHFSAMLARNTRLLELQLSGNSLGDA 351

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G +   L LG C++  +G   +A +L  N+++  LDL  N + D G  
Sbjct: 352 GVQQLCQGLGQPGAVLRVLCLGDCEVTNNGCSSLASLLLANHSLCELDLSNNCMSDVGVL 411

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDDGAFAIAQA 551
            LA+S +    + E L   D  + E  D+   A+ ++
Sbjct: 412 QLAESLQQPGCMLEKLVLFDTYWMEDTDNRLRALEES 448



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 180/414 (43%), Gaps = 6/414 (1%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL- 242
           E L   Q  + V     GIT    K     L  N  L  LNL  N +GD G++ L   L 
Sbjct: 17  ELLPLIQQHQVVRLIDCGITEGRCKDISSALGDNPTLTELNLCNNELGDAGMRLLLQGLH 76

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-N 301
                +++L + +  L + G   +   L++   LR L L+NN +  +G   L + LL+  
Sbjct: 77  SPTCKIQKLSVQNCGLTEAGCGVLPGALRSVPTLRELYLSNNPLGDAGLRLLCDGLLDPQ 136

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             I  L +      A     LA  L   +  +EL +  N +GD G+RAL  GL+     L
Sbjct: 137 CHIERLQVEYCNLTAASCEPLAAVLRAKREFKELMVSNNDLGDAGVRALCRGLADSASPL 196

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITTI 420
             L +   +++      +   + +  SL  + L  N +GD G  K+    L  +  + T+
Sbjct: 197 ESLRLEGCNLTLASCQDLGSIVASKASLCTLELGDNKLGDAGIAKLCPGLLSPSSQLRTL 256

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLG 479
            L   +I + G   + RVLK    +  L +A N +G +GA+ L E +L    ++ +L   
Sbjct: 257 WLWECDITASGCRDLCRVLKAKGSLKELSVAGNAVGDEGAQLLCESLLAPSCHLESLWAK 316

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
            C   A+  +  + ML  N  +  L L  N L D G + L Q        L  + L   E
Sbjct: 317 SCGFTAACCQHFSAMLARNTRLLELQLSGNSLGDAGVQQLCQGLGQPGAVLRVLCLGDCE 376

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEV 593
           + ++G  ++A  L AN   ++  L+L+NN ++  G   L ++      M EK V
Sbjct: 377 VTNNGCSSLASLLLANH--SLCELDLSNNCMSDVGVLQLAESLQQPGCMLEKLV 428



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 122/271 (45%), Gaps = 11/271 (4%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIK 208
           S + L    +  R F  + +S  + GD G+  L   L  + +  E +      +T A  +
Sbjct: 153 SCEPLAAVLRAKREFKELMVSNNDLGDAGVRALCRGLADSASPLESLRLEGCNLTLASCQ 212

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIA 267
               ++ S  +L TL L  N +GD G+  LC  +L  ++ +  L L   D+   G + + 
Sbjct: 213 DLGSIVASKASLCTLELGDNKLGDAGIAKLCPGLLSPSSQLRTLWLWECDITASGCRDLC 272

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA-----L 322
            +LK    L+ L +  N +   G   L E+LL  S     HL   +  + G  A      
Sbjct: 273 RVLKAKGSLKELSVAGNAVGDEGAQLLCESLLAPSC----HLESLWAKSCGFTAACCQHF 328

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           +  L  N  L EL L GNS+GD G++ L  GL      L VL +G+  ++  G   +A  
Sbjct: 329 SAMLARNTRLLELQLSGNSLGDAGVQQLCQGLGQPGAVLRVLCLGDCEVTNNGCSSLASL 388

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           +    SL  ++L  N + D G  ++A++L+Q
Sbjct: 389 LLANHSLCELDLSNNCMSDVGVLQLAESLQQ 419


>gi|320169160|gb|EFW46059.1| hypothetical protein CAOG_04027 [Capsaspora owczarzaki ATCC 30864]
          Length = 437

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 114/204 (55%), Gaps = 13/204 (6%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L  N IGD G + IA+AL  N T+T + L  N I   GA A+A  LK +  +  LDL 
Sbjct: 53  VQLDQNQIGDTGLQAIAEALTVNTTVTHLGLQLNQIGDAGAQALAEALKVSKTLIWLDLN 112

Query: 452 YNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
            N IG  GA A++E LK +   +  L LGW QIG +GA+ +A+ LR   T++ LDLR N 
Sbjct: 113 KNQIGDVGAGAIAEALKVNTTTLTELFLGWNQIGDAGAQAIAEALRVTTTLTFLDLRRNQ 172

Query: 511 LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK------------ANEDV 558
           + D GA+ +A++ KV    LT + ++ N+I D GA AIA+ALK            A    
Sbjct: 173 IGDAGAQAIAEALKVNTTTLTELFMSANQIGDTGAQAIAEALKIGDVGAQAFAKVAQVRP 232

Query: 559 AVTSLNLANNFLTKFGQSALTDAK 582
            +T ++L  N++   G  A+ +A+
Sbjct: 233 MMTCIDLQGNYIGDAGTRAIEEAR 256



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 136/277 (49%), Gaps = 22/277 (7%)

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A+ IA  LK ++ +  ++L+ N I  +G  ++AEAL  N+T+  L L  N  G  GA AL
Sbjct: 37  AQVIAAALKVHATIEDVQLDQNQIGDTGLQAIAEALTVNTTVTHLGLQLNQIGDAGAQAL 96

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L+ +K+L  L L+ N IGD G  A+   L      L  L +G N I   GA  +AE 
Sbjct: 97  AEALKVSKTLIWLDLNKNQIGDVGAGAIAEALKVNTTTLTELFLGWNQIGDAGAQAIAEA 156

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKD 441
           ++   +L +++L  N IGD GA+ IA+ALK N  T+T + +  N I   GA AIA  LK 
Sbjct: 157 LRVTTTLTFLDLRRNQIGDAGAQAIAEALKVNTTTLTELFMSANQIGDTGAQAIAEALK- 215

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
                        IG  GA+A ++V +    +  + L    IG +G   + +  R+ N  
Sbjct: 216 -------------IGDVGAQAFAKVAQVRPMMTCIDLQGNYIGDAGTRAIEEA-RFANES 261

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
           S +D       D     LA S +  +   T I   F+
Sbjct: 262 SAIDF------DNQISPLAFSLQPRSSTTTDIQTVFH 292



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 130/257 (50%), Gaps = 44/257 (17%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A  +A  L+ + ++ ++ L  N IGD G++A+   L+            N +++  G   
Sbjct: 37  AQVIAAALKVHATIEDVQLDQNQIGDTGLQAIAEALTV-----------NTTVTHLG--- 82

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
                          L +N IGD GA+ +A+ALK ++T+  +DL  N I   GA AIA  
Sbjct: 83  ---------------LQLNQIGDAGAQALAEALKVSKTLIWLDLNKNQIGDVGAGAIAEA 127

Query: 439 LKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           LK N+  +T L L +N IG  GA+A++E L+    +  L L   QIG +GA+ +A+ L+ 
Sbjct: 128 LKVNTTTLTELFLGWNQIGDAGAQAIAEALRVTTTLTFLDLRRNQIGDAGAQAIAEALKV 187

Query: 498 NNT-ISILDLRANGLRDEGAKCLAQSFKV-------------VNEALTSIDLAFNEIRDD 543
           N T ++ L + AN + D GA+ +A++ K+             V   +T IDL  N I D 
Sbjct: 188 NTTTLTELFMSANQIGDTGAQAIAEALKIGDVGAQAFAKVAQVRPMMTCIDLQGNYIGDA 247

Query: 544 GAFAIAQALKANEDVAV 560
           G  AI +A  ANE  A+
Sbjct: 248 GTRAIEEARFANESSAI 264



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 124/265 (46%), Gaps = 24/265 (9%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           E +  ++ A+++  A   + AA +K        +  ++ + L  N IGD G++ + + L 
Sbjct: 21  EEITIDKVADKLDVAEAQVIAAALKV-------HATIEDVQLDQNQIGDTGLQAIAEALT 73

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN-S 302
            N  V  L L    + D GA+A+AE LK +  L  L+LN N I   G  ++AEAL  N +
Sbjct: 74  VNTTVTHLGLQLNQIGDAGAQALAEALKVSKTLIWLDLNKNQIGDVGAGAIAEALKVNTT 133

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           T+  L L  N  G  GA A+A+ L    +L  L L  N IGD G +A+   L      L 
Sbjct: 134 TLTELFLGWNQIGDAGAQAIAEALRVTTTLTFLDLRRNQIGDAGAQAIAEALKVNTTTLT 193

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            L +  N I   GA  +AE +K              IGD GA+  A   +    +T IDL
Sbjct: 194 ELFMSANQIGDTGAQAIAEALK--------------IGDVGAQAFAKVAQVRPMMTCIDL 239

Query: 423 GGNNIHSKGASAI--ARVLKDNSVI 445
            GN I   G  AI  AR   ++S I
Sbjct: 240 QGNYIGDAGTRAIEEARFANESSAI 264



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 88/163 (53%), Gaps = 2/163 (1%)

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           TID   + +    A  IA  LK ++ I  + L  N IG  G +A++E L  +  +  L L
Sbjct: 24  TIDKVADKLDVAEAQVIAAALKVHATIEDVQLDQNQIGDTGLQAIAEALTVNTTVTHLGL 83

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
              QIG +GA+ +A+ L+ + T+  LDL  N + D GA  +A++ KV    LT + L +N
Sbjct: 84  QLNQIGDAGAQALAEALKVSKTLIWLDLNKNQIGDVGAGAIAEALKVNTTTLTELFLGWN 143

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           +I D GA AIA+AL+      +T L+L  N +   G  A+ +A
Sbjct: 144 QIGDAGAQAIAEALRVT--TTLTFLDLRRNQIGDAGAQAIAEA 184



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 34/246 (13%)

Query: 139 LSGFTGKLFRESKQ---TLNEFAKELRA---------------FSSVDMSGRNFGDEGLF 180
           ++G   KL+R+ K    T+++ A +L                    V +     GD GL 
Sbjct: 7   MTGKQRKLYRQVKNEEITIDKVADKLDVAEAQVIAAALKVHATIEDVQLDQNQIGDTGLQ 66

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            +AE+L  N T   +    N I  AG +A    L+ +  L  L+L+ N IGD G   + +
Sbjct: 67  AIAEALTVNTTVTHLGLQLNQIGDAGAQALAEALKVSKTLIWLDLNKNQIGDVGAGAIAE 126

Query: 241 IL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
            L V+   +  L L    + D GA+AIAE L+  + L  L+L  N I  +G  ++AEAL 
Sbjct: 127 ALKVNTTTLTELFLGWNQIGDAGAQAIAEALRVTTTLTFLDLRRNQIGDAGAQAIAEALK 186

Query: 300 EN-STIRSLHLNGNYGGALGANALAKGLE----GNKSLRE----------LHLHGNSIGD 344
            N +T+  L ++ N  G  GA A+A+ L+    G ++  +          + L GN IGD
Sbjct: 187 VNTTTLTELFMSANQIGDTGAQAIAEALKIGDVGAQAFAKVAQVRPMMTCIDLQGNYIGD 246

Query: 345 EGIRAL 350
            G RA+
Sbjct: 247 AGTRAI 252


>gi|320169065|gb|EFW45964.1| connexin 32 [Capsaspora owczarzaki ATCC 30864]
          Length = 587

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 121/207 (58%), Gaps = 7/207 (3%)

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           Y K  K+   +NL  +++GD  A+ IA+ALK N T+    L  N I   GA AI   LK 
Sbjct: 14  YDKVKKASGVLNLQKSEVGDAEAQAIAEALKVNTTV----LQNNQIGDAGAQAIVESLKV 69

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ +T L L  N IG  GA+A++E LK +  +  L LG  QIG +GA+ + + L+ N T+
Sbjct: 70  NTTLTELGLQNNQIGDAGAQAIAETLKVNTTLAELALGGNQIGDAGAQAMTEALKVNTTL 129

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           ++L L  N + D GA+ +A++ KV N  +T + L+ N++ D G  AI  ALK N+   +T
Sbjct: 130 TVLYLDVNQIGDAGAQAIAEALKV-NAKVTKLYLSHNQMTDVGGQAIVGALKVNK--TLT 186

Query: 562 SLNLANNFLTKFGQSALTDAKDLVYEM 588
           SL L  NFLT  G +AL +  + V ++
Sbjct: 187 SLELKKNFLTNTGITALNETGNTVCKL 213



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 6/200 (3%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L+L  + +GD   +A+   L     K+    + NN I   GA  + E +K   +L  + L
Sbjct: 24  LNLQKSEVGDAEAQAIAEAL-----KVNTTVLQNNQIGDAGAQAIVESLKVNTTLTELGL 78

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N IGD GA+ IA+ LK N T+  + LGGN I   GA A+   LK N+ +T L L  N 
Sbjct: 79  QNNQIGDAGAQAIAETLKVNTTLAELALGGNQIGDAGAQAMTEALKVNTTLTVLYLDVNQ 138

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA+A++E LK +  +  L L   Q+   G + +   L+ N T++ L+L+ N L + 
Sbjct: 139 IGDAGAQAIAEALKVNAKVTKLYLSHNQMTDVGGQAIVGALKVNKTLTSLELKKNFLTNT 198

Query: 515 GAKCLAQSFKVVNEALTSID 534
           G   L ++   V + L S+D
Sbjct: 199 GITALNETGNTVCK-LESLD 217



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 113/221 (51%), Gaps = 7/221 (3%)

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           L D +   +GV  LQ S V   D  A+AIAE LK N+ +    L NN I  +G  ++ E+
Sbjct: 13  LYDKVKKASGVLNLQKSEVG--DAEAQAIAEALKVNTTV----LQNNQIGDAGAQAIVES 66

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           L  N+T+  L L  N  G  GA A+A+ L+ N +L EL L GN IGD G +A+   L   
Sbjct: 67  LKVNTTLTELGLQNNQIGDAGAQAIAETLKVNTTLAELALGGNQIGDAGAQAMTEALKVN 126

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
              L VL +  N I   GA  +AE +K    +  + L  N + D G + I  ALK N+T+
Sbjct: 127 T-TLTVLYLDVNQIGDAGAQAIAEALKVNAKVTKLYLSHNQMTDVGGQAIVGALKVNKTL 185

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           T+++L  N + + G +A+         + SLD    P  AD
Sbjct: 186 TSLELKKNFLTNTGITALNETGNTVCKLESLDNQRAPSPAD 226



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 9/206 (4%)

Query: 150 SKQTLNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           S +++N+  ++L     +A   +++     GD     +AE+L  N T        N I  
Sbjct: 2   SYESMNQKQRKLYDKVKKASGVLNLQKSEVGDAEAQAIAEALKVNTTV----LQNNQIGD 57

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG +A    L+ N  L  L L  N IGD G + + + L  N  +  L L    + D GA+
Sbjct: 58  AGAQAIVESLKVNTTLTELGLQNNQIGDAGAQAIAETLKVNTTLAELALGGNQIGDAGAQ 117

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+ E LK N+ L VL L+ N I  +G  ++AEAL  N+ +  L+L+ N    +G  A+  
Sbjct: 118 AMTEALKVNTTLTVLYLDVNQIGDAGAQAIAEALKVNAKVTKLYLSHNQMTDVGGQAIVG 177

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRAL 350
            L+ NK+L  L L  N + + GI AL
Sbjct: 178 ALKVNKTLTSLELKKNFLTNTGITAL 203



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 69/145 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + + +     GD G   +AE+L  N T  E++   N I  AG +A  
Sbjct: 61  QAIVESLKVNTTLTELGLQNNQIGDAGAQAIAETLKVNTTLAELALGGNQIGDAGAQAMT 120

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L L  N IGD G + + + L  NA V +L LS   + D G +AI   LK
Sbjct: 121 EALKVNTTLTVLYLDVNQIGDAGAQAIAEALKVNAKVTKLYLSHNQMTDVGGQAIVGALK 180

Query: 272 NNSILRVLELNNNMIDYSGFTSLAE 296
            N  L  LEL  N +  +G T+L E
Sbjct: 181 VNKTLTSLELKKNFLTNTGITALNE 205



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 10/132 (7%)

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           ++Y  +     K   +V K  G +N   L   ++G + A+ +A+ L+ N T+    L+ N
Sbjct: 1   MSYESMNQKQRKLYDKVKKASGVLN---LQKSEVGDAEAQAIAEALKVNTTV----LQNN 53

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
            + D GA+ + +S KV N  LT + L  N+I D GA AIA+ LK N  +A   L L  N 
Sbjct: 54  QIGDAGAQAIVESLKV-NTTLTELGLQNNQIGDAGAQAIAETLKVNTTLA--ELALGGNQ 110

Query: 570 LTKFGQSALTDA 581
           +   G  A+T+A
Sbjct: 111 IGDAGAQAMTEA 122


>gi|405944805|pdb|3TSR|E Chain E, X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed
           With Mouse Ribonuclease 1
 gi|405944806|pdb|3TSR|F Chain F, X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed
           With Mouse Ribonuclease 1
 gi|405944807|pdb|3TSR|G Chain G, X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed
           With Mouse Ribonuclease 1
 gi|405944808|pdb|3TSR|H Chain H, X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed
           With Mouse Ribonuclease 1
          Length = 457

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S    G+T AG     G+L+S   L
Sbjct: 53  ALTELSLRTNELGDGGVGLVLQGL-QNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTL 111

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GD G+K LC+ L D    +E+LQL   +L     + +A +L+  +  + L
Sbjct: 112 RELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKEL 171

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN +   G   L + L +++  + SL L      A     L   +    SL+EL L 
Sbjct: 172 VLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLS 231

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL  GL     KL  L +    I+A+G   +   ++  +SL  ++L  N+
Sbjct: 232 SNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNE 291

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA  + ++ L+    + ++ +   ++ +        VL  +  +  L ++ NP+G 
Sbjct: 292 LKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGD 351

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
           +G + L + L     +   L LG C +  SG   +A++L  N ++  LDL  N +   G 
Sbjct: 352 EGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNCMGGPGV 411

Query: 517 KCLAQSFK 524
             L +S K
Sbjct: 412 LQLLESLK 419



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 4/314 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + ++    GD GL  L E L   Q   E++      +TA   +    VL+  
Sbjct: 106 RSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVK 165

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              K L LS N + + GV+ LC  L D+A  +E L+L +  +     K + +++ + + L
Sbjct: 166 ADFKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASL 225

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L++N +  +G  +L   LL  S  +R+L L      A G   L + L   +SL+EL
Sbjct: 226 QELDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKEL 285

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N + DEG R L   L     +L  L I   S++A    +    +   +SLL + + 
Sbjct: 286 SLASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMS 345

Query: 396 MNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GDEG +++  AL Q  T+   + LG  ++ + G S++A VL  N  +  LDL+ N 
Sbjct: 346 SNPLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNC 405

Query: 455 IGADGAKALSEVLK 468
           +G  G   L E LK
Sbjct: 406 MGGPGVLQLLESLK 419



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 183/409 (44%), Gaps = 9/409 (2%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+      D       E L   Q  E V     G+T    K     +Q+N AL  L+L
Sbjct: 3   SLDIQCEQLSD---ARWTELLPLIQQYEVVRLDDCGLTEVRCKDISSAVQANPALTELSL 59

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV  +   L +    +++L L +  L + G   +  +L++ S LR L LN+N
Sbjct: 60  RTNELGDGGVGLVLQGLQNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTLRELHLNDN 119

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E L +    +  L L      A     LA  L      +EL L  N + 
Sbjct: 120 PMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKELVLSNNDLH 179

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L  L + N  I+A     + + + +  SL  ++L  N +G+ G
Sbjct: 180 EPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLSSNKLGNAG 239

Query: 404 AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              +   L   +  + T+ L   +I ++G   + RVL+    +  L LA N +  +GA+ 
Sbjct: 240 IAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNELKDEGARL 299

Query: 463 LSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           L E L   G  + +L +  C + A+   +   +L  + ++  L + +N L DEG + L +
Sbjct: 300 LCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGDEGVQELCK 359

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           +    +  L  + L   ++ + G  ++A  L AN   ++  L+L+NN +
Sbjct: 360 ALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANR--SLRELDLSNNCM 406



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 3/253 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           F  + +S  +  + G+  L + L  +    E +     GITAA  K    V+ S  +L+ 
Sbjct: 168 FKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQE 227

Query: 223 LNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+LS N +G+ G+  LC  +L+ +  +  L L   D+  EG K +  +L+    L+ L L
Sbjct: 228 LDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSL 287

Query: 282 NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            +N +   G   L E+LLE    + SL +      A         L  ++SL EL +  N
Sbjct: 288 ASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSN 347

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GDEG++ L   LS     L  L +G+  ++  G   +A  +   +SL  ++L  N +G
Sbjct: 348 PLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNCMG 407

Query: 401 DEGAEKIADALKQ 413
             G  ++ ++LKQ
Sbjct: 408 GPGVLQLLESLKQ 420


>gi|111226718|ref|XP_001134580.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
 gi|90970733|gb|EAS66896.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
          Length = 624

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 175/343 (51%), Gaps = 32/343 (9%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEG 262
           A  ++  + + +S   L  LNL  N IGD G K L   L ++ + ++ L LS  DL    
Sbjct: 174 AMNLEYIEVIKKSMKQLTHLNLFSNKIGDIGFKNLAMALEESGSKLKFLGLSYCDLTKAS 233

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            K + EL K N  L+ + L+ N+            L+E  TI                 +
Sbjct: 234 GKPLCELFKKNQSLQEIILSYNL------------LMEEGTIE----------------M 265

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           AKGL  + SL +L L  N IGD G + +   LS  K  +  LD+  NSI +KG+ ++ +Y
Sbjct: 266 AKGLPYSCSLIKLSLSNNEIGDLGAKEIGEALSQNK-TITELDLRCNSIGSKGSNYICQY 324

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+ +SL+ I+L+ N +G++GA  I  AL+ N+ I +I+L  N+I  +G   I   L  +
Sbjct: 325 LKDNRSLVEIDLWGNSLGNDGANGIGKALETNQYIKSINLTRNSIQEQGIKFITNALSLS 384

Query: 443 -SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
              I ++DL+ N +  +G K +S  L F+ +I  + L   +I ++G++ +   L  NNTI
Sbjct: 385 LCSIVTIDLSSNSLTLEGTKEISRALSFNRSIENINLSSNKIDSNGSKILCKSLLKNNTI 444

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
             L+L  N + ++G     +  K  ++ L  ++L+ N+I + G
Sbjct: 445 KSLNLSMNDIGEQGCIYFYRVLK-KSKNLEHLNLSLNKIGNKG 486



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 157/304 (51%), Gaps = 5/304 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF---AANGITAAGIKAFDGVLQ 215
           K ++  + +++     GD G   LA +L   ++  ++ F   +   +T A  K    + +
Sbjct: 185 KSMKQLTHLNLFSNKIGDIGFKNLAMAL--EESGSKLKFLGLSYCDLTKASGKPLCELFK 242

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N +L+ + LS N + +EG   +   L  +  + +L LS+ ++ D GAK I E L  N  
Sbjct: 243 KNQSLQEIILSYNLLMEEGTIEMAKGLPYSCSLIKLSLSNNEIGDLGAKEIGEALSQNKT 302

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           +  L+L  N I   G   + + L +N ++  + L GN  G  GAN + K LE N+ ++ +
Sbjct: 303 ITELDLRCNSIGSKGSNYICQYLKDNRSLVEIDLWGNSLGNDGANGIGKALETNQYIKSI 362

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L  NSI ++GI+ + + LS     +  +D+ +NS++ +G   ++  +   +S+  INL 
Sbjct: 363 NLTRNSIQEQGIKFITNALSLSLCSIVTIDLSSNSLTLEGTKEISRALSFNRSIENINLS 422

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N I   G++ +  +L +N TI +++L  N+I  +G     RVLK +  +  L+L+ N I
Sbjct: 423 SNKIDSNGSKILCKSLLKNNTIKSLNLSMNDIGEQGCIYFYRVLKKSKNLEHLNLSLNKI 482

Query: 456 GADG 459
           G  G
Sbjct: 483 GNKG 486



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 2/252 (0%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K L  L+L  N IGD G + L   L     KL  L +    ++      + E  K  +SL
Sbjct: 188 KQLTHLNLFSNKIGDIGFKNLAMALEESGSKLKFLGLSYCDLTKASGKPLCELFKKNQSL 247

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             I L  N + +EG  ++A  L  + ++  + L  N I   GA  I   L  N  IT LD
Sbjct: 248 QEIILSYNLLMEEGTIEMAKGLPYSCSLIKLSLSNNEIGDLGAKEIGEALSQNKTITELD 307

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L  N IG+ G+  + + LK + ++  + L    +G  GA  +   L  N  I  ++L  N
Sbjct: 308 LRCNSIGSKGSNYICQYLKDNRSLVEIDLWGNSLGNDGANGIGKALETNQYIKSINLTRN 367

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
            ++++G K +  +  +   ++ +IDL+ N +  +G   I++AL  N   ++ ++NL++N 
Sbjct: 368 SIQEQGIKFITNALSLSLCSIVTIDLSSNSLTLEGTKEISRALSFNR--SIENINLSSNK 425

Query: 570 LTKFGQSALTDA 581
           +   G   L  +
Sbjct: 426 IDSNGSKILCKS 437



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 2/259 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L + S + L E  K+ ++   + +S     +EG   +A+ L Y+ +  ++S + N I   
Sbjct: 229 LTKASGKPLCELFKKNQSLQEIILSYNLLMEEGTIEMAKGLPYSCSLIKLSLSNNEIGDL 288

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G K     L  N  +  L+L  N IG +G   +C  L DN  +  + L    L ++GA  
Sbjct: 289 GAKEIGEALSQNKTITELDLRCNSIGSKGSNYICQYLKDNRSLVEIDLWGNSLGNDGANG 348

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAK 324
           I + L+ N  ++ + L  N I   G   +  AL L   +I ++ L+ N     G   +++
Sbjct: 349 IGKALETNQYIKSINLTRNSIQEQGIKFITNALSLSLCSIVTIDLSSNSLTLEGTKEISR 408

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N+S+  ++L  N I   G + L   L  +   +  L++  N I  +G  +    +K
Sbjct: 409 ALSFNRSIENINLSSNKIDSNGSKILCKSL-LKNNTIKSLNLSMNDIGEQGCIYFYRVLK 467

Query: 385 NCKSLLWINLYMNDIGDEG 403
             K+L  +NL +N IG++G
Sbjct: 468 KSKNLEHLNLSLNKIGNKG 486



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 105/192 (54%), Gaps = 1/192 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  + +D+   + G +G  ++ + L  N++  E+    N +   G       L++N  +K
Sbjct: 301 KTITELDLRCNSIGSKGSNYICQYLKDNRSLVEIDLWGNSLGNDGANGIGKALETNQYIK 360

Query: 222 TLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           ++NL+ N I ++G+K + + L +    +  + LSS  L  EG K I+  L  N  +  + 
Sbjct: 361 SINLTRNSIQEQGIKFITNALSLSLCSIVTIDLSSNSLTLEGTKEISRALSFNRSIENIN 420

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L++N ID +G   L ++LL+N+TI+SL+L+ N  G  G     + L+ +K+L  L+L  N
Sbjct: 421 LSSNKIDSNGSKILCKSLLKNNTIKSLNLSMNDIGEQGCIYFYRVLKKSKNLEHLNLSLN 480

Query: 341 SIGDEGIRALMS 352
            IG++G+  L+S
Sbjct: 481 KIGNKGLINLLS 492


>gi|31981748|ref|NP_660117.2| ribonuclease inhibitor isoform a [Mus musculus]
 gi|285402638|ref|NP_001165571.1| ribonuclease inhibitor isoform a [Mus musculus]
 gi|78099143|sp|Q91VI7.1|RINI_MOUSE RecName: Full=Ribonuclease inhibitor; AltName:
           Full=Ribonuclease/angiogenin inhibitor 1
 gi|16307569|gb|AAH10331.1| Ribonuclease/angiogenin inhibitor 1 [Mus musculus]
 gi|74151027|dbj|BAE27643.1| unnamed protein product [Mus musculus]
 gi|74194220|dbj|BAE24659.1| unnamed protein product [Mus musculus]
 gi|74228742|dbj|BAE21862.1| unnamed protein product [Mus musculus]
 gi|148686056|gb|EDL18003.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Mus musculus]
 gi|148686057|gb|EDL18004.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Mus musculus]
 gi|148686058|gb|EDL18005.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Mus musculus]
          Length = 456

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G+  + + L  N T   +++S    G+T AG     G+L+S   L
Sbjct: 52  ALTELSLRTNELGDGGVGLVLQGL-QNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GD G+K LC+ L D    +E+LQL   +L     + +A +L+  +  + L
Sbjct: 111 RELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN +   G   L + L +++  + SL L      A     L   +    SL+EL L 
Sbjct: 171 VLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLS 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL  GL     KL  L +    I+A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNE 290

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA  + ++ L+    + ++ +   ++ +        VL  +  +  L ++ NP+G 
Sbjct: 291 LKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGD 350

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
           +G + L + L     +   L LG C +  SG   +A++L  N ++  LDL  N +   G 
Sbjct: 351 EGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNCMGGPGV 410

Query: 517 KCLAQSFK 524
             L +S K
Sbjct: 411 LQLLESLK 418



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 4/314 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + ++    GD GL  L E L   Q   E++      +TA   +    VL+  
Sbjct: 105 RSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVK 164

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              K L LS N + + GV+ LC  L D+A  +E L+L +  +     K + +++ + + L
Sbjct: 165 ADFKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASL 224

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L++N +  +G  +L   LL  S  +R+L L      A G   L + L   +SL+EL
Sbjct: 225 QELDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKEL 284

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N + DEG R L   L     +L  L I   S++A    +    +   +SLL + + 
Sbjct: 285 SLASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMS 344

Query: 396 MNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GDEG +++  AL Q  T+   + LG  ++ + G S++A VL  N  +  LDL+ N 
Sbjct: 345 SNPLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNC 404

Query: 455 IGADGAKALSEVLK 468
           +G  G   L E LK
Sbjct: 405 MGGPGVLQLLESLK 418



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 183/409 (44%), Gaps = 9/409 (2%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+      D       E L   Q  E V     G+T    K     +Q+N AL  L+L
Sbjct: 2   SLDIQCEQLSD---ARWTELLPLIQQYEVVRLDDCGLTEVRCKDISSAVQANPALTELSL 58

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV  +   L +    +++L L +  L + G   +  +L++ S LR L LN+N
Sbjct: 59  RTNELGDGGVGLVLQGLQNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTLRELHLNDN 118

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E L +    +  L L      A     LA  L      +EL L  N + 
Sbjct: 119 PMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKELVLSNNDLH 178

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L  L + N  I+A     + + + +  SL  ++L  N +G+ G
Sbjct: 179 EPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLSSNKLGNAG 238

Query: 404 AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              +   L   +  + T+ L   +I ++G   + RVL+    +  L LA N +  +GA+ 
Sbjct: 239 IAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNELKDEGARL 298

Query: 463 LSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           L E L   G  + +L +  C + A+   +   +L  + ++  L + +N L DEG + L +
Sbjct: 299 LCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGDEGVQELCK 358

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           +    +  L  + L   ++ + G  ++A  L AN   ++  L+L+NN +
Sbjct: 359 ALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANR--SLRELDLSNNCM 405



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 3/253 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           F  + +S  +  + G+  L + L  +    E +     GITAA  K    V+ S  +L+ 
Sbjct: 167 FKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQE 226

Query: 223 LNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+LS N +G+ G+  LC  +L+ +  +  L L   D+  EG K +  +L+    L+ L L
Sbjct: 227 LDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAEGCKDLCRVLRAKQSLKELSL 286

Query: 282 NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            +N +   G   L E+LLE    + SL +      A         L  ++SL EL +  N
Sbjct: 287 ASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSN 346

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GDEG++ L   LS     L  L +G+  ++  G   +A  +   +SL  ++L  N +G
Sbjct: 347 PLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNCMG 406

Query: 401 DEGAEKIADALKQ 413
             G  ++ ++LKQ
Sbjct: 407 GPGVLQLLESLKQ 419


>gi|449274817|gb|EMC83895.1| Putative protein C14orf166B [Columba livia]
          Length = 510

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 179/362 (49%), Gaps = 32/362 (8%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N+    +NL+ + +G +GVK +   LV N     L+L    +  EGA  +AE+L+ NS 
Sbjct: 94  QNLDKPYINLNHHGLGPKGVKAIAIALVSNTTTTHLELEDNCILAEGAICLAEMLRENSS 153

Query: 276 LRVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L+VL ++NN +D +G  ++   LL+N S + +L L+GN  G   A   A+ L  N  +++
Sbjct: 154 LQVLNISNNHLDTAGAEAITSLLLDNVSCLHTLQLSGNNFGEEAALYFAEALMSNYQVKK 213

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N   ++G + L   L+S   KL  LD+  N +  KGA  ++  ++   +L  +NL
Sbjct: 214 LDLSHNEFHEKGGQLLGQMLASNT-KLEFLDLSWNHLKRKGAVGLSVGLRVNDALKILNL 272

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N IG+EGA  + +ALK N  +  +D+  N I+++GA  + R L+ N  +  L +A NP
Sbjct: 273 SWNGIGNEGALALGEALKLNNVLVHLDISNNKINNEGAKRLCRGLEVNGNLKILKMANNP 332

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASG--------AEFVADMLRYNNTISILD- 505
           +  +GA AL  V+    N  ++     +I  SG          FV ++L   N I +LD 
Sbjct: 333 LTVEGATAL--VVSVRKNAKSM---MEEINISGFNLQIPTIKYFVENVLVNENFIKLLDG 387

Query: 506 -----LRANGLRDEGAKCLAQ-------SFKVVNEALTSIDLA----FNEIRDDGAFAIA 549
                   + + DE   C+++         K++   L + +L     F +I  DG   I 
Sbjct: 388 VYKMHPELDVIYDEVESCISKIPKQHPNPMKLIQNYLKAHNLQLWDFFRKIDKDGNMKIP 447

Query: 550 QA 551
            A
Sbjct: 448 VA 449



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 14/302 (4%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N +   L L  N I  EG   L   L      L VL+I
Sbjct: 101 INLNHHGLGPKGVKAIAIALVSNTTTTHLELEDNCILAEGAICLAEMLRENSS-LQVLNI 159

Query: 367 GNNSISAKGAFHVAEYI-KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +   GA  +   +  N   L  + L  N+ G+E A   A+AL  N  +  +DL  N
Sbjct: 160 SNNHLDTAGAEAITSLLLDNVSCLHTLQLSGNNFGEEAALYFAEALMSNYQVKKLDLSHN 219

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
             H KG   + ++L  N+ +  LDL++N +   GA  LS  L+ +  +  L L W  IG 
Sbjct: 220 EFHEKGGQLLGQMLASNTKLEFLDLSWNHLKRKGAVGLSVGLRVNDALKILNLSWNGIGN 279

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + + L+ NN +  LD+  N + +EGAK L +  + VN  L  + +A N +  +GA
Sbjct: 280 EGALALGEALKLNNVLVHLDISNNKINNEGAKRLCRGLE-VNGNLKILKMANNPLTVEGA 338

Query: 546 FAIAQALKAN-----EDVAVTSLNLANNFLTKFGQSALTDAK-----DLVYEMSEKEVNI 595
            A+  +++ N     E++ ++  NL    +  F ++ L +       D VY+M   E+++
Sbjct: 339 TALVVSVRKNAKSMMEEINISGFNLQIPTIKYFVENVLVNENFIKLLDGVYKM-HPELDV 397

Query: 596 FF 597
            +
Sbjct: 398 IY 399



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 132/262 (50%), Gaps = 10/262 (3%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            + N     + L+   L  +G KAIA  L +N+    LEL +N I   G   LAE L EN
Sbjct: 92  FIQNLDKPYINLNHHGLGPKGVKAIAIALVSNTTTTHLELEDNCILAEGAICLAEMLREN 151

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEG----IRALMSGLSS 356
           S+++ L+++ N+    GA A+   L  N S L  L L GN+ G+E       ALMS    
Sbjct: 152 SSLQVLNISNNHLDTAGAEAITSLLLDNVSCLHTLQLSGNNFGEEAALYFAEALMSNYQV 211

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           +K     LD+ +N    KG   + + + +   L +++L  N +  +GA  ++  L+ N  
Sbjct: 212 KK-----LDLSHNEFHEKGGQLLGQMLASNTKLEFLDLSWNHLKRKGAVGLSVGLRVNDA 266

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  ++L  N I ++GA A+   LK N+V+  LD++ N I  +GAK L   L+ +GN+  L
Sbjct: 267 LKILNLSWNGIGNEGALALGEALKLNNVLVHLDISNNKINNEGAKRLCRGLEVNGNLKIL 326

Query: 477 KLGWCQIGASGAEFVADMLRYN 498
           K+    +   GA  +   +R N
Sbjct: 327 KMANNPLTVEGATALVVSVRKN 348



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 114/216 (52%), Gaps = 3/216 (1%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGV 235
           EG   LAE L  N + + ++ + N +  AG +A   +L  N++ L TL LSGN  G+E  
Sbjct: 139 EGAICLAEMLRENSSLQVLNISNNHLDTAGAEAITSLLLDNVSCLHTLQLSGNNFGEEAA 198

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
               + L+ N  V++L LS  +  ++G + + ++L +N+ L  L+L+ N +   G   L+
Sbjct: 199 LYFAEALMSNYQVKKLDLSHNEFHEKGGQLLGQMLASNTKLEFLDLSWNHLKRKGAVGLS 258

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
             L  N  ++ L+L+ N  G  GA AL + L+ N  L  L +  N I +EG + L  GL 
Sbjct: 259 VGLRVNDALKILNLSWNGIGNEGALALGEALKLNNVLVHLDISNNKINNEGAKRLCRGLE 318

Query: 356 SRKGKLAVLDIGNNSISAKGAFH-VAEYIKNCKSLL 390
              G L +L + NN ++ +GA   V    KN KS++
Sbjct: 319 VN-GNLKILKMANNPLTVEGATALVVSVRKNAKSMM 353



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 141/290 (48%), Gaps = 5/290 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++++    G +G+  +A +L  N T   +    N I A G      +L+ N +L+ LN+S
Sbjct: 101 INLNHHGLGPKGVKAIAIALVSNTTTTHLELEDNCILAEGAICLAEMLRENSSLQVLNIS 160

Query: 227 GNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N +   G + +  +L+DN   +  LQLS  +  +E A   AE L +N  ++ L+L++N 
Sbjct: 161 NNHLDTAGAEAITSLLLDNVSCLHTLQLSGNNFGEEAALYFAEALMSNYQVKKLDLSHNE 220

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G   L + L  N+ +  L L+ N+    GA  L+ GL  N +L+ L+L  N IG+E
Sbjct: 221 FHEKGGQLLGQMLASNTKLEFLDLSWNHLKRKGAVGLSVGLRVNDALKILNLSWNGIGNE 280

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL   L      L  LDI NN I+ +GA  +   ++   +L  + +  N +  EGA 
Sbjct: 281 GALALGEAL-KLNNVLVHLDISNNKINNEGAKRLCRGLEVNGNLKILKMANNPLTVEGAT 339

Query: 406 KIADALKQN--RTITTIDLGGNNIHSKGASA-IARVLKDNSVITSLDLAY 452
            +  ++++N    +  I++ G N+        +  VL + + I  LD  Y
Sbjct: 340 ALVVSVRKNAKSMMEEINISGFNLQIPTIKYFVENVLVNENFIKLLDGVY 389



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 30/203 (14%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
              ++ +SG NFG+E   + AE+                            L SN  +K 
Sbjct: 182 CLHTLQLSGNNFGEEAALYFAEA----------------------------LMSNYQVKK 213

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N   ++G + L  +L  N  +E L LS   L+ +GA  ++  L+ N  L++L L+
Sbjct: 214 LDLSHNEFHEKGGQLLGQMLASNTKLEFLDLSWNHLKRKGAVGLSVGLRVNDALKILNLS 273

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G  +L EAL  N+ +  L ++ N     GA  L +GLE N +L+ L +  N +
Sbjct: 274 WNGIGNEGALALGEALKLNNVLVHLDISNNKINNEGAKRLCRGLEVNGNLKILKMANNPL 333

Query: 343 GDEGIRALMSGLSSRKGKLAVLD 365
             EG  AL+  +S RK   ++++
Sbjct: 334 TVEGATALV--VSVRKNAKSMME 354


>gi|156354969|ref|XP_001623451.1| predicted protein [Nematostella vectensis]
 gi|156210151|gb|EDO31351.1| predicted protein [Nematostella vectensis]
          Length = 1189

 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 161/318 (50%), Gaps = 35/318 (11%)

Query: 236  KCLCDILVDNAGVE--RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
            K + ++L  N  +   RL+ +S +   E   ++ + LKNNS L  + ++ N +  +  + 
Sbjct: 824  KAMANVLTRNKSLRYLRLRWNSDEHEYEMGTSVVKSLKNNSTLSAIHIDFNSLGDACASE 883

Query: 294  LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
            LAE L++N+++  ++++G Y G  G  ++AK L+ N ++R L + G ++  E  RAL   
Sbjct: 884  LAEVLVDNTSLNDIYISGEYLGDAGVASIAKALKVNTTVRALGIIGGNMTPEAGRAL--- 940

Query: 354  LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
                                       E +K+  ++  ++L+  +IGD GA  IA  L Q
Sbjct: 941  --------------------------GEMLKHNTTITCLSLFCGNIGDSGALCIASGLSQ 974

Query: 414  NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
            N T+  I +  + I + G SA+A+V+++   +T LDL+ N IG  GAK + +V++    +
Sbjct: 975  NTTLEKIRIENSCIGATGVSALAKVIQN---VTYLDLSMNIIGTKGAKPIVKVIENSCKL 1031

Query: 474  NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
              L++  C I   G   +A  L  N  +  L +   G+ DEG   LA+S    N++L  +
Sbjct: 1032 KYLRIDHCNIDVFGVRDIAQALSKNTNLEELSVACAGIDDEGMCELARSV-AKNKSLQVL 1090

Query: 534  DLAFNEIRDDGAFAIAQA 551
             + +N+I + G  AI +A
Sbjct: 1091 TITYNKISEKGKRAIIEA 1108



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 8/265 (3%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            L++N  L  +++  N +GD     L ++LVDN  +  + +S   L D G  +IA+ LK N
Sbjct: 860  LKNNSTLSAIHIDFNSLGDACASELAEVLVDNTSLNDIYISGEYLGDAGVASIAKALKVN 919

Query: 274  SILRVLE-LNNNMIDYSGFTSLAEALLENSTIRSLHL-NGNYGGALGANALAKGLEGNKS 331
            + +R L  +  NM   +G  +L E L  N+TI  L L  GN G + GA  +A GL  N +
Sbjct: 920  TTVRALGIIGGNMTPEAG-RALGEMLKHNTTITCLSLFCGNIGDS-GALCIASGLSQNTT 977

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L ++ +  + IG  G+ AL   + +    +  LD+  N I  KGA  + + I+N   L +
Sbjct: 978  LEKIRIENSCIGATGVSALAKVIQN----VTYLDLSMNIIGTKGAKPIVKVIENSCKLKY 1033

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
            + +   +I   G   IA AL +N  +  + +    I  +G   +AR +  N  +  L + 
Sbjct: 1034 LRIDHCNIDVFGVRDIAQALSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTIT 1093

Query: 452  YNPIGADGAKALSEVLKFHGNINTL 476
            YN I   G +A+ E      ++N L
Sbjct: 1094 YNKISEKGKRAIIEACAKSQSLNHL 1118



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 4/227 (1%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + + + +SG   GD G+  +A++L  N T   +      +T    +A   +L+ N  +  
Sbjct: 893  SLNDIYISGEYLGDAGVASIAKALKVNTTVRALGIIGGNMTPEAGRALGEMLKHNTTITC 952

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L+L    IGD G  C+   L  N  +E++++ +  +   G  A+A++++N   +  L+L+
Sbjct: 953  LSLFCGNIGDSGALCIASGLSQNTTLEKIRIENSCIGATGVSALAKVIQN---VTYLDLS 1009

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
             N+I   G   + + +  +  ++ L ++       G   +A+ L  N +L EL +    I
Sbjct: 1010 MNIIGTKGAKPIVKVIENSCKLKYLRIDHCNIDVFGVRDIAQALSKNTNLEELSVACAGI 1069

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             DEG+  L   ++  K  L VL I  N IS KG   + E     +SL
Sbjct: 1070 DDEGMCELARSVAKNKS-LQVLTITYNKISEKGKRAIIEACAKSQSL 1115



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 130/282 (46%), Gaps = 11/282 (3%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
              S++ +   + GD     LAE L  N +  ++  +   +  AG+ +    L+ N  ++ 
Sbjct: 865  TLSAIHIDFNSLGDACASELAEVLVDNTSLNDIYISGEYLGDAGVASIAKALKVNTTVRA 924

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L + G  +  E  + L ++L  N  +  L L   ++ D GA  IA  L  N+ L  + + 
Sbjct: 925  LGIIGGNMTPEAGRALGEMLKHNTTITCLSLFCGNIGDSGALCIASGLSQNTTLEKIRIE 984

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N+ I  +G ++LA+ +++N T   L L+ N  G  GA  + K +E +  L+ L +   +I
Sbjct: 985  NSCIGATGVSALAK-VIQNVTY--LDLSMNIIGTKGAKPIVKVIENSCKLKYLRIDHCNI 1041

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
               G+R +   L S+   L  L +    I  +G   +A  +   KSL  + +  N I ++
Sbjct: 1042 DVFGVRDIAQAL-SKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYNKISEK 1100

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            G   I +A  +++++       N++  +    +   LK +SV
Sbjct: 1101 GKRAIIEACAKSQSL-------NHLFHENDPILNTCLKPHSV 1135



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 123/268 (45%), Gaps = 44/268 (16%)

Query: 294  LAEALLENSTIRSLHL--------NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            L E L  +S+++ L +        +GN+  A+ AN L +    NKSLR L L  NS   E
Sbjct: 795  LTEVLAASSSVQKLGIFFGSSPFHDGNFEKAM-ANVLTR----NKSLRYLRLRWNSDEHE 849

Query: 346  GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
                               ++G +         V + +KN  +L  I++  N +GD  A 
Sbjct: 850  ------------------YEMGTS---------VVKSLKNNSTLSAIHIDFNSLGDACAS 882

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            ++A+ L  N ++  I + G  +   G ++IA+ LK N+ + +L +    +  +  +AL E
Sbjct: 883  ELAEVLVDNTSLNDIYISGEYLGDAGVASIAKALKVNTTVRALGIIGGNMTPEAGRALGE 942

Query: 466  VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            +LK +  I  L L    IG SGA  +A  L  N T+  + +  + +   G   LA+    
Sbjct: 943  MLKHNTTITCLSLFCGNIGDSGALCIASGLSQNTTLEKIRIENSCIGATGVSALAK---- 998

Query: 526  VNEALTSIDLAFNEIRDDGAFAIAQALK 553
            V + +T +DL+ N I   GA  I + ++
Sbjct: 999  VIQNVTYLDLSMNIIGTKGAKPIVKVIE 1026



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 3/215 (1%)

Query: 144  GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
            G +  E+ + L E  K     + + +   N GD G   +A  L  N T E++    + I 
Sbjct: 930  GNMTPEAGRALGEMLKHNTTITCLSLFCGNIGDSGALCIASGLSQNTTLEKIRIENSCIG 989

Query: 204  AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
            A G+ A   V+Q+   +  L+LS N IG +G K +  ++ ++  ++ L++   ++   G 
Sbjct: 990  ATGVSALAKVIQN---VTYLDLSMNIIGTKGAKPIVKVIENSCKLKYLRIDHCNIDVFGV 1046

Query: 264  KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
            + IA+ L  N+ L  L +    ID  G   LA ++ +N +++ L +  N     G  A+ 
Sbjct: 1047 RDIAQALSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYNKISEKGKRAII 1106

Query: 324  KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
            +    ++SL  L    + I +  ++     L SR+
Sbjct: 1107 EACAKSQSLNHLFHENDPILNTCLKPHSVCLHSRE 1141


>gi|78369510|ref|NP_001030396.1| ribonuclease inhibitor [Bos taurus]
 gi|74268096|gb|AAI02769.1| Ribonuclease/angiogenin inhibitor 1 [Bos taurus]
          Length = 456

 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 185/397 (46%), Gaps = 8/397 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + + L       +++S     +T AG     GVL+S   L+
Sbjct: 52  SLTELSLRTNELGDGGVLLVLQGLQSPTCKIQKLSLQNCCLTEAGCGVLPGVLRSLPTLR 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+GD G++ LC+ L+D    +E+LQL    L     + +A +L+    L+ L 
Sbjct: 112 ELHLSDNPLGDAGLRLLCEGLLDPRCRLEKLQLEYCSLTAASCEPLAAVLRATRDLKELV 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I  +G  +L   L E++  + +L L      A     L   +    SL++L L  
Sbjct: 172 VSNNDIGEAGVQALCRGLAESACQLETLKLENCGLTAANCKDLCGIVASQASLKDLDLGS 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL S   +L  L +    ++  G   +   ++  ++L  ++L  N +
Sbjct: 232 NRLGDAGLAELCPGLLSPSSQLRTLWLWECDLTVSGCRELCRVLQAKEALKELSLAGNSL 291

Query: 400 GDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA+ + ++L Q    + ++ +      +      + +L  N  +  L L+ NP+G  
Sbjct: 292 GDEGAQLLCESLLQPGCQLESLWVKSCGFTAACCQHFSSMLTQNKHLLELQLSSNPLGDA 351

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G   L + L   G +   L +G C++  S    +A +L  + ++  LDL  NGL D G  
Sbjct: 352 GVHVLCQALGQPGTVLRVLWVGDCELTNSSCGGLASLLLASPSLRELDLSNNGLGDPGVL 411

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDDGAFAIAQA 551
            L  S +      E L   D+ + E  D+   A+ ++
Sbjct: 412 QLLGSLEQPACSLEQLVLYDIYWTEAVDERLRAVEES 448



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 177/400 (44%), Gaps = 16/400 (4%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           E L   Q  E V     G+T    K     LQ+N +L  L+L  N +GD GV     +LV
Sbjct: 17  ELLPLIQQYEVVRLDDCGLTEVRCKDIGSALQANASLTELSLRTNELGDGGV-----LLV 71

Query: 244 ------DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
                     +++L L +  L + G   +  +L++   LR L L++N +  +G   L E 
Sbjct: 72  LQGLQSPTCKIQKLSLQNCCLTEAGCGVLPGVLRSLPTLRELHLSDNPLGDAGLRLLCEG 131

Query: 298 LLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           LL+    +  L L      A     LA  L   + L+EL +  N IG+ G++AL  GL+ 
Sbjct: 132 LLDPRCRLEKLQLEYCSLTAASCEPLAAVLRATRDLKELVVSNNDIGEAGVQALCRGLAE 191

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNR 415
              +L  L + N  ++A     +   + +  SL  ++L  N +GD G AE     L  + 
Sbjct: 192 SACQLETLKLENCGLTAANCKDLCGIVASQASLKDLDLGSNRLGDAGLAELCPGLLSPSS 251

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NIN 474
            + T+ L   ++   G   + RVL+    +  L LA N +G +GA+ L E L   G  + 
Sbjct: 252 QLRTLWLWECDLTVSGCRELCRVLQAKEALKELSLAGNSLGDEGAQLLCESLLQPGCQLE 311

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
           +L +  C   A+  +  + ML  N  +  L L +N L D G   L Q+       L  + 
Sbjct: 312 SLWVKSCGFTAACCQHFSSMLTQNKHLLELQLSSNPLGDAGVHVLCQALGQPGTVLRVLW 371

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           +   E+ +     +A  L A+   ++  L+L+NN L   G
Sbjct: 372 VGDCELTNSSCGGLASLLLASP--SLRELDLSNNGLGDPG 409



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 150/320 (46%), Gaps = 10/320 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + +S    GD GL  L E L   +   E++      +TAA  +    VL++ 
Sbjct: 105 RSLPTLRELHLSDNPLGDAGLRLLCEGLLDPRCRLEKLQLEYCSLTAASCEPLAAVLRAT 164

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
             LK L +S N IG+ GV+ LC  L ++A  +E L+L +  L     K +  ++ + + L
Sbjct: 165 RDLKELVVSNNDIGEAGVQALCRGLAESACQLETLKLENCGLTAANCKDLCGIVASQASL 224

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L +N +  +G   L   LL  S+ +R+L L        G   L + L+  ++L+EL
Sbjct: 225 KDLDLGSNRLGDAGLAELCPGLLSPSSQLRTLWLWECDLTVSGCRELCRVLQAKEALKEL 284

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GNS+GDEG + L   L     +L  L + +   +A    H +  +   K LL + L 
Sbjct: 285 SLAGNSLGDEGAQLLCESLLQPGCQLESLWVKSCGFTAACCQHFSSMLTQNKHLLELQLS 344

Query: 396 MNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GD G   +  AL Q  T+   + +G   + +     +A +L  +  +  LDL+ N 
Sbjct: 345 SNPLGDAGVHVLCQALGQPGTVLRVLWVGDCELTNSSCGGLASLLLASPSLRELDLSNNG 404

Query: 455 IGADGAKALSEVLKFHGNIN 474
           +G  G      VL+  G++ 
Sbjct: 405 LGDPG------VLQLLGSLE 418


>gi|428177637|gb|EKX46516.1| hypothetical protein GUITHDRAFT_107721 [Guillardia theta CCMP2712]
          Length = 604

 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 165/373 (44%), Gaps = 35/373 (9%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +S  A   +A  + A    L+  + L  ++L  N IG +G+K L D        + L+ 
Sbjct: 44  RISIVAQSYSANLLPALVNALEGGLHLVHMDLRSNNIGAQGMKLLLDSFCKTPRAKELKY 103

Query: 254 SSVD---LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
            S+D   + DEGA  + +LL+   ++  L + NN I Y                      
Sbjct: 104 LSLDHNNISDEGALLLGDLLRTCPLIETLNVANNGIGYH--------------------- 142

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                  GA  LA+ L   K L    + GN  GDEGIR + + L   K +L  L +  N 
Sbjct: 143 -------GAAGLAQSLPHCKYLSGFDIGGNGFGDEGIREMSTFLGQCK-RLKQLSLRFNE 194

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I   GA ++AE++  C SL  + +  N +   G   I+  L +   ++ +DL G  I ++
Sbjct: 195 IHVDGAENLAEHLPRCDSLTHLQICRNKLECSGIRHISSCLPRCNQLSFLDLSGTCICNE 254

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA+ +A  +     +  LDL  N IG +GA  LS   K    +  L L    +G  G E 
Sbjct: 255 GAAILAECIVLCKKLQHLDLRDNKIGVEGASRLSSSFKHCNLLEFLDLSKNGLGDQGVEG 314

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           ++  L +   +  L L  NG  D GA  L +    V  +L  + LA N+I D GA A++ 
Sbjct: 315 LSSGLTWCERLVHLALGMNGFGDRGATSLGRQ---VRSSLQHLFLANNKISDRGAEALSS 371

Query: 551 ALKANEDVAVTSL 563
           +L    ++A+  L
Sbjct: 372 SLCGCPELAIVDL 384



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 145/567 (25%), Positives = 237/567 (41%), Gaps = 63/567 (11%)

Query: 41  FSGTRRCFRLKRLVVKAAARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFVVPAGVFVS 100
            +G R C+RL RL+  A           +V   SQ+     TA V  ++ F     + V+
Sbjct: 1   MAGLRTCWRLYRLLPSAP----------KVLLFSQTGRDCPTATVSCLSRFGGRISI-VA 49

Query: 101 ATF---VLWKLVEKL-----LMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQ 152
            ++   +L  LV  L     L+    R +   A+GM                      K 
Sbjct: 50  QSYSANLLPALVNALEGGLHLVHMDLRSNNIGAQGM----------------------KL 87

Query: 153 TLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
            L+ F K  RA     + +   N  DEG   L + L      E ++ A NGI   G    
Sbjct: 88  LLDSFCKTPRAKELKYLSLDHNNISDEGALLLGDLLRTCPLIETLNVANNGIGYHGAAGL 147

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
              L     L   ++ GN  GDEG++ +   L     +++L L   ++  +GA+ +AE L
Sbjct: 148 AQSLPHCKYLSGFDIGGNGFGDEGIREMSTFLGQCKRLKQLSLRFNEIHVDGAENLAEHL 207

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
                L  L++  N ++ SG   ++  L   + +  L L+G      GA  LA+ +   K
Sbjct: 208 PRCDSLTHLQICRNKLECSGIRHISSCLPRCNQLSFLDLSGTCICNEGAAILAECIVLCK 267

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L+ L L  N IG EG   L S        L  LD+  N +  +G   ++  +  C+ L+
Sbjct: 268 KLQHLDLRDNKIGVEGASRLSSSF-KHCNLLEFLDLSKNGLGDQGVEGLSSGLTWCERLV 326

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + L MN  GD GA  +   ++   ++  + L  N I  +GA A++  L     +  +DL
Sbjct: 327 HLALGMNGFGDRGATSLGRQVRS--SLQHLFLANNKISDRGAEALSSSLCGCPELAIVDL 384

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI--LDLRA 508
            +N IGA G   L E       ++ +KL      A     VA + R +++ S+  L LR 
Sbjct: 385 RWNKIGASGGALLGE------RLSRVKL------ALAVNLVAGLARTSSSSSVRHLGLRH 432

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           N + D G    +     +  +L  IDL+ N I + GA A+A+ L       +  ++L  N
Sbjct: 433 NLVEDAGLIGFSPMLSSL-RSLAIIDLSCNRIGNQGALALAEVLPKLRQ--IVRVDLREN 489

Query: 569 FLTKFGQSALTDAKDLVYEMSEKEVNI 595
            +  FG  AL ++      +S  ++ I
Sbjct: 490 GIGDFGAMALAESLPCCPALSSLDIRI 516



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 152/393 (38%), Gaps = 77/393 (19%)

Query: 162 RAFSSVDMSGRNFGDEGL-----FF-----------------------LAESLGYNQTAE 193
           +  S  D+ G  FGDEG+     F                        LAE L    +  
Sbjct: 155 KYLSGFDIGGNGFGDEGIREMSTFLGQCKRLKQLSLRFNEIHVDGAENLAEHLPRCDSLT 214

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +    N +  +GI+     L     L  L+LSG  I +EG   L + +V    ++ L L
Sbjct: 215 HLQICRNKLECSGIRHISSCLPRCNQLSFLDLSGTCICNEGAAILAECIVLCKKLQHLDL 274

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               +  EGA  ++   K+ ++L  L+L+ N +   G   L+  L     +  L L  N 
Sbjct: 275 RDNKIGVEGASRLSSSFKHCNLLEFLDLSKNGLGDQGVEGLSSGLTWCERLVHLALGMNG 334

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G  GA +L  G +   SL+ L L  N I D G  AL S L     +LA++D+  N I A
Sbjct: 335 FGDRGATSL--GRQVRSSLQHLFLANNKISDRGAEALSSSLCGCP-ELAIVDLRWNKIGA 391

Query: 374 KGAFHVAEYIKNCK---------------------------------------------- 387
            G   + E +   K                                              
Sbjct: 392 SGGALLGERLSRVKLALAVNLVAGLARTSSSSSVRHLGLRHNLVEDAGLIGFSPMLSSLR 451

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           SL  I+L  N IG++GA  +A+ L + R I  +DL  N I   GA A+A  L     ++S
Sbjct: 452 SLAIIDLSCNRIGNQGALALAEVLPKLRQIVRVDLRENGIGDFGAMALAESLPCCPALSS 511

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           LD+  N  GA GA++L    +   ++     GW
Sbjct: 512 LDIRINCFGAAGARSLRMAEERKKSVTISMEGW 544



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 126/294 (42%), Gaps = 47/294 (15%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E    L+   K       +D+S    GD+G+  L+  L + +    ++   NG   
Sbjct: 278 KIGVEGASRLSSSFKHCNLLEFLDLSKNGLGDQGVEGLSSGLTWCERLVHLALGMNGFGD 337

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G  +    ++S  +L+ L L+ N I                             D GA+
Sbjct: 338 RGATSLGRQVRS--SLQHLFLANNKIS----------------------------DRGAE 367

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A++  L     L +++L  N I  SG   L E L   S ++          AL  N +A 
Sbjct: 368 ALSSSLCGCPELAIVDLRWNKIGASGGALLGERL---SRVKL---------ALAVNLVA- 414

Query: 325 GL---EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           GL     + S+R L L  N + D G+      LSS +  LA++D+  N I  +GA  +AE
Sbjct: 415 GLARTSSSSSVRHLGLRHNLVEDAGLIGFSPMLSSLR-SLAIIDLSCNRIGNQGALALAE 473

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
            +   + ++ ++L  N IGD GA  +A++L     ++++D+  N   + GA ++
Sbjct: 474 VLPKLRQIVRVDLRENGIGDFGAMALAESLPCCPALSSLDIRINCFGAAGARSL 527


>gi|320167551|gb|EFW44450.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 438

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 9/229 (3%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSR-------KGKL-AVLDIGNNSISAKGAFHVAEYIKNC 386
           L L  N IGD   +A+   L          +G L +++ +G N I   GA  +AE +K  
Sbjct: 27  LDLRHNEIGDAEAQAIAEALKVNTETNTILQGTLRSLMILGKNRIGDAGAQAIAEALKVN 86

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           KS++ + +  N IGD GA+ IA+ LK N T+T +D+  N I   GA AI   +K N  +T
Sbjct: 87  KSVITLYVEGNQIGDAGAQAIAETLKVNTTLTVLDVSDNQIGDAGAQAIFEAIKVNPTVT 146

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            +DL  N IG   A+ ++E LK +  +  L++   QIG +GA+ +AD L+ N +++ L L
Sbjct: 147 FIDLHTNEIGDAAAQVIAEALKLNKTVAKLRMDLNQIGDAGAQAIADALKANTSLTALSL 206

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             N +   GA  +A++ + VN+ LTS+ L +N I + G  AI +A K +
Sbjct: 207 GRNQIGTAGALAIAEALQ-VNKTLTSLYLQYNCIGNVGVEAIDEARKVH 254



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 146/289 (50%), Gaps = 42/289 (14%)

Query: 279 LELNNNMIDYSGFTSLAEALLENS--------TIRSLHLNG-NYGGALGANALAKGLEGN 329
           L+L +N I  +   ++AEAL  N+        T+RSL + G N  G  GA A+A+ L+ N
Sbjct: 27  LDLRHNEIGDAEAQAIAEALKVNTETNTILQGTLRSLMILGKNRIGDAGAQAIAEALKVN 86

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           KS+  L++ GN IGD G +A                             +AE +K   +L
Sbjct: 87  KSVITLYVEGNQIGDAGAQA-----------------------------IAETLKVNTTL 117

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             +++  N IGD GA+ I +A+K N T+T IDL  N I    A  IA  LK N  +  L 
Sbjct: 118 TVLDVSDNQIGDAGAQAIFEAIKVNPTVTFIDLHTNEIGDAAAQVIAEALKLNKTVAKLR 177

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           +  N IG  GA+A+++ LK + ++  L LG  QIG +GA  +A+ L+ N T++ L L+ N
Sbjct: 178 MDLNQIGDAGAQAIADALKANTSLTALSLGRNQIGTAGALAIAEALQVNKTLTSLYLQYN 237

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + + G + + ++ KV   +  SI    N +    AF++   L   ED+
Sbjct: 238 CIGNVGVEAIDEARKVHGTSEVSISDQINPL----AFSLLPRLATAEDL 282



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 114/200 (57%), Gaps = 12/200 (6%)

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTI---------DLGGNNIHSKGASAIARVLKD 441
           W++L  N+IGD  A+ IA+ALK N    TI          LG N I   GA AIA  LK 
Sbjct: 26  WLDLRHNEIGDAEAQAIAEALKVNTETNTILQGTLRSLMILGKNRIGDAGAQAIAEALKV 85

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  + +L +  N IG  GA+A++E LK +  +  L +   QIG +GA+ + + ++ N T+
Sbjct: 86  NKSVITLYVEGNQIGDAGAQAIAETLKVNTTLTVLDVSDNQIGDAGAQAIFEAIKVNPTV 145

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + +DL  N + D  A+ +A++ K +N+ +  + +  N+I D GA AIA ALKAN   ++T
Sbjct: 146 TFIDLHTNEIGDAAAQVIAEALK-LNKTVAKLRMDLNQIGDAGAQAIADALKAN--TSLT 202

Query: 562 SLNLANNFLTKFGQSALTDA 581
           +L+L  N +   G  A+ +A
Sbjct: 203 ALSLGRNQIGTAGALAIAEA 222



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 130/268 (48%), Gaps = 20/268 (7%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+++ L + AKE      +D+     GD     +AE+L  N     +             
Sbjct: 9   ENQRRLYDEAKEANRSGWLDLRHNEIGDAEAQAIAEALKVNTETNTI------------- 55

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
              G L+S      + L  N IGD G + + + L  N  V  L +    + D GA+AIAE
Sbjct: 56  -LQGTLRS-----LMILGKNRIGDAGAQAIAEALKVNKSVITLYVEGNQIGDAGAQAIAE 109

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N+ L VL++++N I  +G  ++ EA+  N T+  + L+ N  G   A  +A+ L+ 
Sbjct: 110 TLKVNTTLTVLDVSDNQIGDAGAQAIFEAIKVNPTVTFIDLHTNEIGDAAAQVIAEALKL 169

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           NK++ +L +  N IGD G +A+   L +    L  L +G N I   GA  +AE ++  K+
Sbjct: 170 NKTVAKLRMDLNQIGDAGAQAIADALKANTS-LTALSLGRNQIGTAGALAIAEALQVNKT 228

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRT 416
           L  + L  N IG+ G E I +A K + T
Sbjct: 229 LTSLYLQYNCIGNVGVEAIDEARKVHGT 256


>gi|145344361|ref|XP_001416703.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576929|gb|ABO94996.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 466

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 169/328 (51%), Gaps = 19/328 (5%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA--GVERLQ---LSSV 256
           I+  G +A   VL     LK L L    I D+G   L + +  +A  G  +L+   L S 
Sbjct: 105 ISNEGARAVAEVLAQGWDLKRLALRKVNISDDGAVSLAEAIKASAESGTSKLRWLDLGSN 164

Query: 257 DLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
           D+R  GA AI E L++  + +  L L  N I   G  +L + +  +ST+R + L  N  G
Sbjct: 165 DVRSRGAVAIGEALEHPGVNITRLTLRGNGICSEGMDALGKGISMSSTLRRIDLAHNGFG 224

Query: 316 ALGA----NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
             GA    +AL++G   N  LR L L  NSIG +G+RALM  L      +  LD+G N I
Sbjct: 225 DRGAIAFADALSRGTAPN--LRVLLLGFNSIGPDGMRALMQALMHTD--VEHLDVGCNVI 280

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK----IADALKQNRTITTIDLGGNNI 427
            A GA  +AE I N   L  +NL  N+IG  G       +A AL++N+T+  ++L GN +
Sbjct: 281 GASGAKAIAEMI-NSTRLKSLNLACNNIGLRGERSGLTALAKALEKNKTLEILNLRGNAL 339

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
           H+  A  IA VL + + +  L++ YN +  +GA  ++E L+ +  +  L     ++  +G
Sbjct: 340 HTNCAQDIADVLLEETALIQLNVGYNELYDNGAWEIAEALEENTTLLGLDFQRNEVTDAG 399

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEG 515
           A  +A  L  N+ I  +DLR+N +  EG
Sbjct: 400 ASNIAKTLAVNSIIQEIDLRSNMISSEG 427



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 166/326 (50%), Gaps = 14/326 (4%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-----NNSILRVLELNNN 284
           I +EG + + ++L     ++RL L  V++ D+GA ++AE +K       S LR L+L +N
Sbjct: 105 ISNEGARAVAEVLAQGWDLKRLALRKVNISDDGAVSLAEAIKASAESGTSKLRWLDLGSN 164

Query: 285 MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +   G  ++ EAL      I  L L GN   + G +AL KG+  + +LR + L  N  G
Sbjct: 165 DVRSRGAVAIGEALEHPGVNITRLTLRGNGICSEGMDALGKGISMSSTLRRIDLAHNGFG 224

Query: 344 DEGIRALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           D G  A    LS      L VL +G NSI   G   + + + +   +  +++  N IG  
Sbjct: 225 DRGAIAFADALSRGTAPNLRVLLLGFNSIGPDGMRALMQALMHT-DVEHLDVGCNVIGAS 283

Query: 403 GAEKIADALKQNRTITTIDLGGNNI----HSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GA+ IA+ +   R + +++L  NNI       G +A+A+ L+ N  +  L+L  N +  +
Sbjct: 284 GAKAIAEMINSTR-LKSLNLACNNIGLRGERSGLTALAKALEKNKTLEILNLRGNALHTN 342

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
            A+ +++VL     +  L +G+ ++  +GA  +A+ L  N T+  LD + N + D GA  
Sbjct: 343 CAQDIADVLLEETALIQLNVGYNELYDNGAWEIAEALEENTTLLGLDFQRNEVTDAGASN 402

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDG 544
           +A++   VN  +  IDL  N I  +G
Sbjct: 403 IAKTL-AVNSIIQEIDLRSNMISSEG 427



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 155/304 (50%), Gaps = 17/304 (5%)

Query: 173 NFGDEGLFFLAESLGYNQTAEE-------VSFAANGITAAGIKAFDGVLQ-SNIALKTLN 224
           N  D+G   LAE++    +AE        +   +N + + G  A    L+   + +  L 
Sbjct: 132 NISDDGAVSLAEAI--KASAESGTSKLRWLDLGSNDVRSRGAVAIGEALEHPGVNITRLT 189

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI--LRVLELN 282
           L GN I  EG+  L   +  ++ + R+ L+     D GA A A+ L   +   LRVL L 
Sbjct: 190 LRGNGICSEGMDALGKGISMSSTLRRIDLAHNGFGDRGAIAFADALSRGTAPNLRVLLLG 249

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G  +L +AL+ ++ +  L +  N  GA GA A+A+ +   + L+ L+L  N+I
Sbjct: 250 FNSIGPDGMRALMQALM-HTDVEHLDVGCNVIGASGAKAIAEMINSTR-LKSLNLACNNI 307

Query: 343 GDEGIRALMSGLS---SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           G  G R+ ++ L+    +   L +L++  N++    A  +A+ +    +L+ +N+  N++
Sbjct: 308 GLRGERSGLTALAKALEKNKTLEILNLRGNALHTNCAQDIADVLLEETALIQLNVGYNEL 367

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            D GA +IA+AL++N T+  +D   N +   GAS IA+ L  NS+I  +DL  N I ++G
Sbjct: 368 YDNGAWEIAEALEENTTLLGLDFQRNEVTDAGASNIAKTLAVNSIIQEIDLRSNMISSEG 427

Query: 460 AKAL 463
              L
Sbjct: 428 VAKL 431



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 169/352 (48%), Gaps = 46/352 (13%)

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN-----STIRSLHL 309
           S+ + +EGA+A+AE+L     L+ L L    I   G  SLAEA+  +     S +R L L
Sbjct: 102 SLRISNEGARAVAEVLAQGWDLKRLALRKVNISDDGAVSLAEAIKASAESGTSKLRWLDL 161

Query: 310 NGNYGGALGANALAKGLEG-NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
             N   + GA A+ + LE    ++  L L GN I  EG+ AL  G+S     L  +D+ +
Sbjct: 162 GSNDVRSRGAVAIGEALEHPGVNITRLTLRGNGICSEGMDALGKGISM-SSTLRRIDLAH 220

Query: 369 NSISAKGAFHVAEYIK-----NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           N    +GA   A+ +      N + LL   L  N IG +G   +  AL     +  +D+G
Sbjct: 221 NGFGDRGAIAFADALSRGTAPNLRVLL---LGFNSIGPDGMRALMQALMHT-DVEHLDVG 276

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I + GA AIA ++ +++ + SL+LA N IG  G +                      
Sbjct: 277 CNVIGASGAKAIAEMI-NSTRLKSLNLACNNIGLRGER---------------------- 313

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             SG   +A  L  N T+ IL+LR N L    A+ +A    +   AL  +++ +NE+ D+
Sbjct: 314 --SGLTALAKALEKNKTLEILNLRGNALHTNCAQDIADVL-LEETALIQLNVGYNELYDN 370

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 595
           GA+ IA+AL+  E+  +  L+   N +T  G S +  AK L      +E+++
Sbjct: 371 GAWEIAEALE--ENTTLLGLDFQRNEVTDAGASNI--AKTLAVNSIIQEIDL 418



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 127/278 (45%), Gaps = 37/278 (13%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA--LK 221
            + + + G     EG+  L + +  + T   +  A NG    G  AF   L    A  L+
Sbjct: 185 ITRLTLRGNGICSEGMDALGKGISMSSTLRRIDLAHNGFGDRGAIAFADALSRGTAPNLR 244

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IG +G++ L   L+ +  VE L +    +   GAKAIAE++ N++ L+ L L
Sbjct: 245 VLLLGFNSIGPDGMRALMQALM-HTDVEHLDVGCNVIGASGAKAIAEMI-NSTRLKSLNL 302

Query: 282 NNNMI----DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             N I    + SG T+LA+AL +N T+  L+L GN                        L
Sbjct: 303 ACNNIGLRGERSGLTALAKALEKNKTLEILNLRGNA-----------------------L 339

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           H N   D      ++ +   +  L  L++G N +   GA+ +AE ++   +LL ++   N
Sbjct: 340 HTNCAQD------IADVLLEETALIQLNVGYNELYDNGAWEIAEALEENTTLLGLDFQRN 393

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           ++ D GA  IA  L  N  I  IDL  N I S+G + +
Sbjct: 394 EVTDAGASNIAKTLAVNSIIQEIDLRSNMISSEGVAKL 431



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 4/144 (2%)

Query: 164 FSSVDMSGRNFG----DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
             S++++  N G      GL  LA++L  N+T E ++   N +     +    VL    A
Sbjct: 297 LKSLNLACNNIGLRGERSGLTALAKALEKNKTLEILNLRGNALHTNCAQDIADVLLEETA 356

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  LN+  N + D G   + + L +N  +  L     ++ D GA  IA+ L  NSI++ +
Sbjct: 357 LIQLNVGYNELYDNGAWEIAEALEENTTLLGLDFQRNEVTDAGASNIAKTLAVNSIIQEI 416

Query: 280 ELNNNMIDYSGFTSLAEALLENST 303
           +L +NMI   G   L    L+ +T
Sbjct: 417 DLRSNMISSEGVAKLQPYGLKTNT 440


>gi|146164017|ref|XP_001012847.2| hypothetical protein TTHERM_00093930 [Tetrahymena thermophila]
 gi|146145876|gb|EAR92602.2| hypothetical protein TTHERM_00093930 [Tetrahymena thermophila
           SB210]
          Length = 1124

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 225/436 (51%), Gaps = 24/436 (5%)

Query: 167 VDMSGRNFGDEGLFFLAESLG--YNQTAEEVSFAANGITAAGIKAFDGVLQS--NIALKT 222
           +D +  + GD+G F +A++    Y  T   ++   N + + G+KA    L++  +I   T
Sbjct: 272 IDFNNCSIGDDGCFEIAKNFKSFYGVTHLALNLKNNQLGSVGLKAIIDSLKNFKDIISLT 331

Query: 223 LNLSGNPIGDEGVKCLCDILVD--NAGVERLQLSSVDLRDEGAKAIAELLKNNSILR--V 278
           LN  GN +    +K L + L D  N     L LS  ++   G++ I+ +LKN   L+   
Sbjct: 332 LNFEGNQLSIPNLKNLTESLSDYKNCTDFNLNLSKSNIEFFGSEHISTILKNFKKLQNLH 391

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGALGANALAKGLEGNKSLR--E 334
           L+L+NN I     + +A  L E  +I+ L+L+   N  G  G   +++ LE  K L   E
Sbjct: 392 LDLSNNKICDKALSYIASGLSECESIKILNLDLSSNMFGLEGIAQVSECLEVLKDLVNVE 451

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           + L  N   D+    +   +      + + LD+ +NSI ++G  ++A+ I+  K+L+ +N
Sbjct: 452 VKLRQNQFNDDQANTIAKSIEKNLNIIQLRLDLRSNSIYSEGVAYIAKAIEKYKNLIDLN 511

Query: 394 LYM--NDIGDEGAEKIADALKQNRTITTIDLGGNN--IHSKGASAIARVLKDNSVIT--S 447
           L    N+IG +GA +I +AL++ + I+ + L  N   I   G   I   ++D   IT  S
Sbjct: 512 LDFCENNIGLDGAIEIGNALQKQKNISKLGLFFNQTQIGMNGVKKIVGEIQDYKHITDLS 571

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGW--CQIGASGAEFVADMLR-YNNTISI- 503
           LD   N IG +GA  +S  L+ + N+  L+L     QIG +G   +A+ ++ Y N   + 
Sbjct: 572 LDFGNNSIGVEGAYCISNTLQEYKNLTKLRLYLKKNQIGVNGVNSLANAIQDYQNLTHLT 631

Query: 504 LDLRANGLRDEGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
           L LR N +  +G K ++++  K  N    S+DL+ N+I D+G   ++ AL  N++++   
Sbjct: 632 LFLRKNQIGIDGTKSISKAIEKYENIQELSLDLSDNQIGDEGTIILSTALAKNQNISYLL 691

Query: 563 LNLANNFLTKFGQSAL 578
           +N + N +T+ G +AL
Sbjct: 692 INFSQNQITQDGANAL 707



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 197/376 (52%), Gaps = 24/376 (6%)

Query: 218 IALKTLNLSGNPIGDEGV----KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKN 272
           I +  L+LS N  G EG+    +CL ++L D   VE ++L      D+ A  IA+ + KN
Sbjct: 417 IKILNLDLSSNMFGLEGIAQVSECL-EVLKDLVNVE-VKLRQNQFNDDQANTIAKSIEKN 474

Query: 273 NSILRV-LELNNNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGALGANALAKGLEGN 329
            +I+++ L+L +N I   G   +A+A+ +   +  L+L+   N  G  GA  +   L+  
Sbjct: 475 LNIIQLRLDLRSNSIYSEGVAYIAKAIEKYKNLIDLNLDFCENNIGLDGAIEIGNALQKQ 534

Query: 330 KSLRELHLHGNS--IGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNC 386
           K++ +L L  N   IG  G++ ++  +   K    + LD GNNSI  +GA+ ++  ++  
Sbjct: 535 KNISKLGLFFNQTQIGMNGVKKIVGEIQDYKHITDLSLDFGNNSIGVEGAYCISNTLQEY 594

Query: 387 KSLLWINLYM--NDIGDEGAEKIADALK--QNRTITTIDLGGNNIHSKGASAIARVLK-- 440
           K+L  + LY+  N IG  G   +A+A++  QN T  T+ L  N I   G  +I++ ++  
Sbjct: 595 KNLTKLRLYLKKNQIGVNGVNSLANAIQDYQNLTHLTLFLRKNQIGIDGTKSISKAIEKY 654

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ--IGASGAEFVADMLRYN 498
           +N    SLDL+ N IG +G   LS  L  + NI+ L + + Q  I   GA  +A  L   
Sbjct: 655 ENIQELSLDLSDNQIGDEGTIILSTALAKNQNISYLLINFSQNQITQDGANALATSLENL 714

Query: 499 NTISILDLRANG--LRDEGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             IS L L  NG  L  +G+  ++Q+  K+ N +   +DL+ N++   GA  IA A++ N
Sbjct: 715 LKISKLKLILNGNTLGCQGSVSISQALEKLQNISKLYLDLSENQVYIGGAMGIANAIQNN 774

Query: 556 EDVAVTSLNLANNFLT 571
           + +   SL+   NF+T
Sbjct: 775 KQIKSLSLSFQQNFIT 790



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 212/430 (49%), Gaps = 31/430 (7%)

Query: 167 VDMSGRNFGDEGLFFLAESL-GYNQTAE-EVSFAANGITAAGIKAFDGVLQS--NIALKT 222
           +D+   +   EG+ ++A+++  Y    +  + F  N I   G       LQ   NI+   
Sbjct: 482 LDLRSNSIYSEGVAYIAKAIEKYKNLIDLNLDFCENNIGLDGAIEIGNALQKQKNISKLG 541

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQL----SSVDLRDEGAKAIAELL---KNNSI 275
           L  +   IG  GVK +   + D   +  L L    +S+ +  EGA  I+  L   KN + 
Sbjct: 542 LFFNQTQIGMNGVKKIVGEIQDYKHITDLSLDFGNNSIGV--EGAYCISNTLQEYKNLTK 599

Query: 276 LRVLELNNNMIDYSGFTSLAEAL--LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           LR L L  N I  +G  SLA A+   +N T  +L L  N  G  G  +++K +E  ++++
Sbjct: 600 LR-LYLKKNQIGVNGVNSLANAIQDYQNLTHLTLFLRKNQIGIDGTKSISKAIEKYENIQ 658

Query: 334 ELHLH--GNSIGDEGIRALMSGLSSRKG-KLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           EL L    N IGDEG   L + L+  +     +++   N I+  GA  +A  ++N   + 
Sbjct: 659 ELSLDLSDNQIGDEGTIILSTALAKNQNISYLLINFSQNQITQDGANALATSLENLLKIS 718

Query: 391 WINLYMN--DIGDEGAEKIADALK--QNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
            + L +N   +G +G+  I+ AL+  QN +   +DL  N ++  GA  IA  +++N  I 
Sbjct: 719 KLKLILNGNTLGCQGSVSISQALEKLQNISKLYLDLSENQVYIGGAMGIANAIQNNKQIK 778

Query: 447 SLDLAY--NPIGADGAKALSEVLKFHGNINTLKLGWC--QIGASGAEFVADMLRYNN--- 499
           SL L++  N I  D AK++ +++  +  I  L+L +   QIG S  + +A  L  +N   
Sbjct: 779 SLSLSFQQNFITGDEAKSVIDIISSYQKIKILELNFNNNQIGLSCVQSIASTLNTHNSNF 838

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALT-SIDLAFNEIRDDGAFAIAQALKANEDV 558
           T   L L+ + +  EGAK +AQ  K     +  ++ L+ N I  +G  AIA+A+   +++
Sbjct: 839 TKLSLYLKESQIGQEGAKSIAQGLKRCKFLIQLALQLSKNNIGLEGTQAIAKAISNYQNI 898

Query: 559 AVTSLNLANN 568
              +L LA+N
Sbjct: 899 TQLTLLLADN 908



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 186/395 (47%), Gaps = 24/395 (6%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGYNQTAEE--VSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S+D+S    GDEG   L+ +L  NQ      ++F+ N IT  G  A    L++ + +  L
Sbjct: 661  SLDLSDNQIGDEGTIILSTALAKNQNISYLLINFSQNQITQDGANALATSLENLLKISKL 720

Query: 224  N--LSGNPIGDEGVKCLCDIL--VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
               L+GN +G +G   +   L  + N     L LS   +   GA  IA  ++NN  ++ L
Sbjct: 721  KLILNGNTLGCQGSVSISQALEKLQNISKLYLDLSENQVYIGGAMGIANAIQNNKQIKSL 780

Query: 280  EL--NNNMIDYSGFTSLAEALLENSTIRSLHL--NGNYGGALGANALAKGL---EGNKSL 332
             L    N I      S+ + +     I+ L L  N N  G     ++A  L     N + 
Sbjct: 781  SLSFQQNFITGDEAKSVIDIISSYQKIKILELNFNNNQIGLSCVQSIASTLNTHNSNFTK 840

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSLLW 391
              L+L  + IG EG +++  GL   K  + + L +  N+I  +G   +A+ I N +++  
Sbjct: 841  LSLYLKESQIGQEGAKSIAQGLKRCKFLIQLALQLSKNNIGLEGTQAIAKAISNYQNITQ 900

Query: 392  INLYM--NDIGDEGAEKIADALK--QNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT- 446
            + L +  N I  +GA+ IA+A++  QN     +DL  N I   G ++I+  ++    I  
Sbjct: 901  LTLLLADNQIIGQGAKFIAEAIENYQNIKQLNLDLSINQIEISGFTSISHSIQKLQKIQK 960

Query: 447  -SLDLAYNPIGADGAKALSEVLKFHGNIN--TLKLGWCQIGASGAEFVADMLRYNNTIS- 502
             SL+L+ NPI   G   +S++++   NI+   L LG CQI  +  + + + L     IS 
Sbjct: 961  LSLNLSSNPIDKYGCNTISKIIRRCQNISKLNLSLGSCQINDAIFDPILNCLESKQNISS 1020

Query: 503  -ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
              L+L  N +  +G K +++  K+ +     ID+ 
Sbjct: 1021 LTLNLPINQISFDGVKKISKLQKIKSLTQLKIDVT 1055


>gi|14577933|gb|AAK68859.1|AF071546_1 ribonuclease/angiogenesis inhibitor [Mus musculus]
          Length = 456

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 177/368 (48%), Gaps = 7/368 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           A + + +     GD G   + + L  N T   +++S    G+T AG     G+L+S   L
Sbjct: 52  ALTELSLRTNELGDGGAGLVLQGL-QNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L+L+ NP+GD G+K LC+ L D    +E+LQL   +L     + +A +L+  +  + L
Sbjct: 111 RELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+NN +   G   L + L +++  + SL L      A     L   +    SL+EL L 
Sbjct: 171 VLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLS 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ GI AL  GL     KL  L +    I+A+G   +   ++  +SL  ++L  N+
Sbjct: 231 SNKLGNAGIAALCPGLLLPSCKLGTLWLWECDITAEGCKDLCRVLRANQSLKELSLASNE 290

Query: 399 IGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + DEGA  + ++L +    + ++ +   ++ +        VL  +  +  L ++ NP+G 
Sbjct: 291 LKDEGARLLCESLLEPXCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGD 350

Query: 458 DGAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
           +G + L + L     +   L LG C +  SG   +A++L  N ++  LDL  N +   G 
Sbjct: 351 EGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNCMGGPGV 410

Query: 517 KCLAQSFK 524
             L +S K
Sbjct: 411 LQLLESLK 418



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 4/314 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + ++    GD GL  L E L   Q   E++      +TA   +    VL+  
Sbjct: 105 RSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVK 164

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              K L LS N + + GV+ LC  L D+A  +E L+L +  +     K + +++ + + L
Sbjct: 165 ADFKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASL 224

Query: 277 RVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+L++N +  +G  +L   LL  S  + +L L      A G   L + L  N+SL+EL
Sbjct: 225 QELDLSSNKLGNAGIAALCPGLLLPSCKLGTLWLWECDITAEGCKDLCRVLRANQSLKEL 284

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N + DEG R L   L     +L  L I   S++A    +    +   +SLL + + 
Sbjct: 285 SLASNELKDEGARLLCESLLEPXCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMS 344

Query: 396 MNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GDEG +++  AL Q  T+   + LG  ++ + G S++A VL  N  +  LDL+ N 
Sbjct: 345 SNPLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNC 404

Query: 455 IGADGAKALSEVLK 468
           +G  G   L E LK
Sbjct: 405 MGGPGVLQLLESLK 418



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 185/409 (45%), Gaps = 9/409 (2%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+     GD       E L   Q  E V     G+T    K     +Q+N AL  L+L
Sbjct: 2   SLDIQCEQLGD---ARWTELLPLIQQYEVVRLDDCGLTEVRCKDISSAVQANPALTELSL 58

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD G   +   L +    +++L L +  L + G   +  +L++ S LR L LN+N
Sbjct: 59  RTNELGDGGAGLVLQGLQNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTLRELHLNDN 118

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E L +    +  L L      A     LA  L      +EL L  N + 
Sbjct: 119 PMGDAGLKLLCEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKELVLSNNDLH 178

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L  L + N  I+A     + + + +  SL  ++L  N +G+ G
Sbjct: 179 EPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLSSNKLGNAG 238

Query: 404 AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              +   L   +  + T+ L   +I ++G   + RVL+ N  +  L LA N +  +GA+ 
Sbjct: 239 IAALCPGLLLPSCKLGTLWLWECDITAEGCKDLCRVLRANQSLKELSLASNELKDEGARL 298

Query: 463 LSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           L E +L+    + +L +  C + A+   +   +L  + ++  L + +N L DEG + L +
Sbjct: 299 LCESLLEPXCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGDEGVQELCK 358

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           +    +  L  + L   ++ + G  ++A  L AN   ++  L+L+NN +
Sbjct: 359 ALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANR--SLRELDLSNNCM 405



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 121/253 (47%), Gaps = 3/253 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           F  + +S  +  + G+  L + L  +    E +     GITAA  K    V+ S  +L+ 
Sbjct: 167 FKELVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQE 226

Query: 223 LNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+LS N +G+ G+  LC  +L+ +  +  L L   D+  EG K +  +L+ N  L+ L L
Sbjct: 227 LDLSSNKLGNAGIAALCPGLLLPSCKLGTLWLWECDITAEGCKDLCRVLRANQSLKELSL 286

Query: 282 NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            +N +   G   L E+LLE    + SL +      A         L  ++SL EL +  N
Sbjct: 287 ASNELKDEGARLLCESLLEPXCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSN 346

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GDEG++ L   LS     L  L +G+  ++  G   +A  +   +SL  ++L  N +G
Sbjct: 347 PLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNCMG 406

Query: 401 DEGAEKIADALKQ 413
             G  ++ ++LKQ
Sbjct: 407 GPGVLQLLESLKQ 419


>gi|156355179|ref|XP_001623550.1| predicted protein [Nematostella vectensis]
 gi|156210262|gb|EDO31450.1| predicted protein [Nematostella vectensis]
          Length = 348

 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 176/342 (51%), Gaps = 13/342 (3%)

Query: 217 NIALKTLNL-SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           N +LK L +   N +  E      ++L  N  ++ L L   ++  EGA AIA  LK  S+
Sbjct: 9   NPSLKALRIRCPNEVSSEDAAAFAEMLSHNQVLKELCLEG-NIEVEGAIAIASALKTKSV 67

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           LR L L +N I   G  ++A AL  NST+ +L L  N  G  GA A+A  L+ N +L  L
Sbjct: 68  LRKLSLYSNNIGDKGAIAIASALKTNSTLENLDLRCNNIGDEGAIAMANALKTNSTLENL 127

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           +L  N+IGDE + +++  L +        LD+ + + SA     +A+ +   K++  + +
Sbjct: 128 NLQENNIGDEVLSSIIKTLKTNTSITTFNLDLQSKTSSA----DLADLLSENKTIEHLRI 183

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDL-GGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           Y  D+    A  IA    +N ++  + +   N + S+ A+A A +L  N V+  L L  N
Sbjct: 184 Y--DLHGSIA-AIASTQMKNPSLKALRIRCPNEVSSEDAAAFAEMLSHNQVLRKLRLEGN 240

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            I  +GA A++  LK    +  L L    IG  GA  +A  L+ N+T+  LDLR N + D
Sbjct: 241 -IEVEGAIAIASALKTKSVLRKLSLYSNNIGDKGAIAIASALKTNSTLEKLDLRCNNIGD 299

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           EGA  +A + K  N  L +++L  N I D+G  ++A ALK N
Sbjct: 300 EGAIAMANALKT-NSTLENLNLQGNNIGDEGTISMANALKTN 340



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 113/328 (34%), Positives = 161/328 (49%), Gaps = 15/328 (4%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L +NQ  +E+    N I   G  A    L++   L+ L+L  N IGD+G   +   L
Sbjct: 32  AEMLSHNQVLKELCLEGN-IEVEGAIAIASALKTKSVLRKLSLYSNNIGDKGAIAIASAL 90

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
             N+ +E L L   ++ DEGA A+A  LK NS L  L L  N I     +S+ + L  N+
Sbjct: 91  KTNSTLENLDLRCNNIGDEGAIAMANALKTNSTLENLNLQENNIGDEVLSSIIKTLKTNT 150

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELH---LHGNSIGDEGIRALMSGLSSRKG 359
           +I + +L+        +  LA  L  NK++  L    LHG SI      A ++    +  
Sbjct: 151 SITTFNLD--LQSKTSSADLADLLSENKTIEHLRIYDLHG-SI------AAIASTQMKNP 201

Query: 360 KLAVLDI-GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            L  L I   N +S++ A   AE + + + L  + L  N I  EGA  IA ALK    + 
Sbjct: 202 SLKALRIRCPNEVSSEDAAAFAEMLSHNQVLRKLRLEGN-IEVEGAIAIASALKTKSVLR 260

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            + L  NNI  KGA AIA  LK NS +  LDL  N IG +GA A++  LK +  +  L L
Sbjct: 261 KLSLYSNNIGDKGAIAIASALKTNSTLEKLDLRCNNIGDEGAIAMANALKTNSTLENLNL 320

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDL 506
               IG  G   +A+ L+ N+T+  LDL
Sbjct: 321 QGNNIGDEGTISMANALKTNSTLRSLDL 348



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 164/345 (47%), Gaps = 37/345 (10%)

Query: 265 AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           AIA     N  L+ L +   N +      + AE L  N  ++ L L GN     GA A+A
Sbjct: 1   AIASTQMKNPSLKALRIRCPNEVSSEDAAAFAEMLSHNQVLKELCLEGNIE-VEGAIAIA 59

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+    LR+L L+ N+IGD+G  A+ S L +    L  LD+  N+I  +GA  +A  +
Sbjct: 60  SALKTKSVLRKLSLYSNNIGDKGAIAIASALKTN-STLENLDLRCNNIGDEGAIAMANAL 118

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA-IARVLKDN 442
           K   +L  +NL  N+IGDE    I   LK N +ITT +L   ++ SK +SA +A +L +N
Sbjct: 119 KTNSTLENLNLQENNIGDEVLSSIIKTLKTNTSITTFNL---DLQSKTSSADLADLLSEN 175

Query: 443 SVITSLDL--------------------------AYNPIGADGAKALSEVLKFHGNINTL 476
             I  L +                            N + ++ A A +E+L  +  +  L
Sbjct: 176 KTIEHLRIYDLHGSIAAIASTQMKNPSLKALRIRCPNEVSSEDAAAFAEMLSHNQVLRKL 235

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
           +L    I   GA  +A  L+  + +  L L +N + D+GA  +A + K  N  L  +DL 
Sbjct: 236 RLEG-NIEVEGAIAIASALKTKSVLRKLSLYSNNIGDKGAIAIASALKT-NSTLEKLDLR 293

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            N I D+GA A+A ALK N    + +LNL  N +   G  ++ +A
Sbjct: 294 CNNIGDEGAIAMANALKTNS--TLENLNLQGNNIGDEGTISMANA 336


>gi|253723219|pdb|2BNH|A Chain A, Porcine Ribonuclease Inhibitor
 gi|313507173|pdb|1DFJ|I Chain I, Ribonuclease Inhibitor Complexed With Ribonuclease A
          Length = 457

 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 176/374 (47%), Gaps = 8/374 (2%)

Query: 150 SKQTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAA 205
           +++   +    LRA    + + +     GD G+  + + L       +++S     +T A
Sbjct: 37  TEEHCKDIGSALRANPSLTELCLRTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCSLTEA 96

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
           G       L+S   L+ L+LS NP+GD G++ LC+ L+D    +E+LQL    L     +
Sbjct: 97  GCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCE 156

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALA 323
            +A +L+    L+ L ++NN I  +G   L + L +++  + +L L            L 
Sbjct: 157 PLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLC 216

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             +    SLREL L  N +GD GI  L  GL S   +L  L +    I+A G   +   +
Sbjct: 217 GIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVL 276

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +  ++L  ++L  N +GDEGA  + ++L Q    + ++ +   ++ +     ++ +L  N
Sbjct: 277 QAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQN 336

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +  L L+ N +G  G + L + L   G  +  L LG C++  SG   +A +L  N ++
Sbjct: 337 KHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSL 396

Query: 502 SILDLRANGLRDEG 515
             LDL  N + D G
Sbjct: 397 RELDLSNNCVGDPG 410



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 156/319 (48%), Gaps = 10/319 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + +S    GD GL  L E L   Q   E++      +TAA  +    VL++ 
Sbjct: 106 RSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCEPLASVLRAT 165

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
            ALK L +S N IG+ G + L   L D+A  +E L+L +  L     K +  ++ + + L
Sbjct: 166 RALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLCGIVASQASL 225

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L+L +N +  +G   L   LL   S +++L L      A G   L + L+  ++L+EL
Sbjct: 226 RELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVLQAKETLKEL 285

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GN +GDEG R L   L     +L  L + + S++A    HV+  +   K LL + L 
Sbjct: 286 SLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQNKHLLELQLS 345

Query: 396 MNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GD G +++  AL Q   T+  + LG   + + G S++A +L  N  +  LDL+ N 
Sbjct: 346 SNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSLRELDLSNNC 405

Query: 455 IGADGAKALSEVLKFHGNI 473
           +G  G      VL+  G++
Sbjct: 406 VGDPG------VLQLLGSL 418



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 177/395 (44%), Gaps = 6/395 (1%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDIL 242
           E L   Q  E V     G+T    K     L++N +L  L L  N +GD GV   L  + 
Sbjct: 18  ELLPLLQQYEVVRLDDCGLTEEHCKDIGSALRANPSLTELCLRTNELGDAGVHLVLQGLQ 77

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-N 301
                +++L L +  L + G   +   L++   LR L L++N +  +G   L E LL+  
Sbjct: 78  SPTCKIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQ 137

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +  L L      A     LA  L   ++L+EL +  N IG+ G R L  GL+    +L
Sbjct: 138 CHLEKLQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQL 197

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITTI 420
             L + N  ++      +   + +  SL  ++L  N +GD G AE     L     + T+
Sbjct: 198 ETLRLENCGLTPANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTL 257

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLG 479
            L   +I + G   + RVL+    +  L LA N +G +GA+ L E L   G  + +L + 
Sbjct: 258 WLWECDITASGCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVK 317

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
            C + A+  + V+ ML  N  +  L L +N L D G + L Q+       L  + L   E
Sbjct: 318 SCSLTAACCQHVSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCE 377

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           + + G  ++A  L AN   ++  L+L+NN +   G
Sbjct: 378 VTNSGCSSLASLLLANR--SLRELDLSNNCVGDPG 410



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 3/272 (1%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGIT 203
           +L   S + L    +  RA   + +S  + G+ G   L + L  +    E +     G+T
Sbjct: 149 RLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLT 208

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEG 262
            A  K   G++ S  +L+ L+L  N +GD G+  LC  L+  A  ++ L L   D+   G
Sbjct: 209 PANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASG 268

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA 321
            + +  +L+    L+ L L  N +   G   L E+LL+    + SL +      A     
Sbjct: 269 CRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQH 328

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  L  NK L EL L  N +GD GI+ L   LS     L VL +G+  ++  G   +A 
Sbjct: 329 VSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLAS 388

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
            +   +SL  ++L  N +GD G  ++  +L+Q
Sbjct: 389 LLLANRSLRELDLSNNCVGDPGVLQLLGSLEQ 420


>gi|132574|sp|P10775.1|RINI_PIG RecName: Full=Ribonuclease inhibitor; AltName:
           Full=Ribonuclease/angiogenin inhibitor 1
          Length = 456

 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 176/374 (47%), Gaps = 8/374 (2%)

Query: 150 SKQTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAA 205
           +++   +    LRA    + + +     GD G+  + + L       +++S     +T A
Sbjct: 36  TEEHCKDIGSALRANPSLTELCLRTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCSLTEA 95

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
           G       L+S   L+ L+LS NP+GD G++ LC+ L+D    +E+LQL    L     +
Sbjct: 96  GCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCE 155

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALA 323
            +A +L+    L+ L ++NN I  +G   L + L +++  + +L L            L 
Sbjct: 156 PLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLC 215

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             +    SLREL L  N +GD GI  L  GL S   +L  L +    I+A G   +   +
Sbjct: 216 GIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVL 275

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +  ++L  ++L  N +GDEGA  + ++L Q    + ++ +   ++ +     ++ +L  N
Sbjct: 276 QAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQN 335

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +  L L+ N +G  G + L + L   G  +  L LG C++  SG   +A +L  N ++
Sbjct: 336 KHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSL 395

Query: 502 SILDLRANGLRDEG 515
             LDL  N + D G
Sbjct: 396 RELDLSNNCVGDPG 409



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 156/319 (48%), Gaps = 10/319 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + +S    GD GL  L E L   Q   E++      +TAA  +    VL++ 
Sbjct: 105 RSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCEPLASVLRAT 164

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
            ALK L +S N IG+ G + L   L D+A  +E L+L +  L     K +  ++ + + L
Sbjct: 165 RALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLCGIVASQASL 224

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L+L +N +  +G   L   LL   S +++L L      A G   L + L+  ++L+EL
Sbjct: 225 RELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVLQAKETLKEL 284

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GN +GDEG R L   L     +L  L + + S++A    HV+  +   K LL + L 
Sbjct: 285 SLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQNKHLLELQLS 344

Query: 396 MNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GD G +++  AL Q   T+  + LG   + + G S++A +L  N  +  LDL+ N 
Sbjct: 345 SNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSLRELDLSNNC 404

Query: 455 IGADGAKALSEVLKFHGNI 473
           +G  G      VL+  G++
Sbjct: 405 VGDPG------VLQLLGSL 417



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 177/395 (44%), Gaps = 6/395 (1%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDIL 242
           E L   Q  E V     G+T    K     L++N +L  L L  N +GD GV   L  + 
Sbjct: 17  ELLPLLQQYEVVRLDDCGLTEEHCKDIGSALRANPSLTELCLRTNELGDAGVHLVLQGLQ 76

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-N 301
                +++L L +  L + G   +   L++   LR L L++N +  +G   L E LL+  
Sbjct: 77  SPTCKIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQ 136

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +  L L      A     LA  L   ++L+EL +  N IG+ G R L  GL+    +L
Sbjct: 137 CHLEKLQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQL 196

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITTI 420
             L + N  ++      +   + +  SL  ++L  N +GD G AE     L     + T+
Sbjct: 197 ETLRLENCGLTPANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTL 256

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLG 479
            L   +I + G   + RVL+    +  L LA N +G +GA+ L E L   G  + +L + 
Sbjct: 257 WLWECDITASGCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVK 316

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
            C + A+  + V+ ML  N  +  L L +N L D G + L Q+       L  + L   E
Sbjct: 317 SCSLTAACCQHVSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCE 376

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           + + G  ++A  L AN   ++  L+L+NN +   G
Sbjct: 377 VTNSGCSSLASLLLANR--SLRELDLSNNCVGDPG 409



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 3/272 (1%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGIT 203
           +L   S + L    +  RA   + +S  + G+ G   L + L  +    E +     G+T
Sbjct: 148 RLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLT 207

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEG 262
            A  K   G++ S  +L+ L+L  N +GD G+  LC  L+  A  ++ L L   D+   G
Sbjct: 208 PANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASG 267

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA 321
            + +  +L+    L+ L L  N +   G   L E+LL+    + SL +      A     
Sbjct: 268 CRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQH 327

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  L  NK L EL L  N +GD GI+ L   LS     L VL +G+  ++  G   +A 
Sbjct: 328 VSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLAS 387

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
            +   +SL  ++L  N +GD G  ++  +L+Q
Sbjct: 388 LLLANRSLRELDLSNNCVGDPGVLQLLGSLEQ 419


>gi|294661100|ref|YP_003572975.1| hypothetical protein Aasi_1477 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|227336250|gb|ACP20847.1| hypothetical protein Aasi_1477 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 614

 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 212/440 (48%), Gaps = 44/440 (10%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQ-SNIALK 221
             ++ +S  + GD+G   LA+ L G N     V  + N I   G++ F   LQ +N+ + 
Sbjct: 156 IHTLGLSWNHLGDQGAIVLAQHLQGTN--VHTVDISDNQIGDQGLEGFAKHLQETNVHMV 213

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+ S   IGD+G +     L     V  + LS   + D GA+A+A+ L+   +   L+L
Sbjct: 214 VLSRS--EIGDQGAEGFAKHL-QGTRVHVVDLSMNKMGDSGAEALAKHLQGTQV-HTLDL 269

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N I   G  +LA+ L + + ++ + L  N     GA ALA+ L+   ++  L+L  N 
Sbjct: 270 SMNKIGDQGAEALAKHL-QGTNLQEIDLRFNQISDRGAIALAQHLQ-KTNIHTLNLKSNK 327

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IG +G  AL+  L  +  ++  LD+  N I   G   +A+YIK   S+  INL  N I  
Sbjct: 328 IGAQGAIALVQHL--KDARIHTLDLCENKIKDAGVIALAQYIKGT-SVHTINLSKNKISV 384

Query: 402 EGAEKIADALK-----------------------QNRTITTIDLGGNNIHSKGASAIARV 438
            GA ++A  L+                       Q   + T++L GNNI  +G  A+ + 
Sbjct: 385 LGAMELAKHLQETNVHTLNLGYNLIRAGQLVKHLQGTRVHTLNLNGNNIDGQGVIALTQY 444

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+  +V   L L  N +GA+GA  L + L+   N+  L LG  +IG  GA  +A +L+  
Sbjct: 445 LEGTNV-QELCLGDNQMGAEGAIRLCKYLQ-STNLEKLGLGSNEIGNVGAIELAKLLQDT 502

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           N +  LDL  N + D GA  + Q  +     +  + L+FNEI  +GA  IAQ L+  +  
Sbjct: 503 N-VHTLDLSMNEIDDVGAIGIVQHLQ--GTKVKELRLSFNEIGTEGAIGIAQHLQGTK-- 557

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            V  L+L +N + + G   L
Sbjct: 558 -VQELDLGHNRIDEEGAMQL 576



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 187/370 (50%), Gaps = 20/370 (5%)

Query: 157 FAKELRA--FSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGV 213
            AK L+     ++D+S    GD+G   LA+ L G N   +E+    N I+  G  A    
Sbjct: 255 LAKHLQGTQVHTLDLSMNKIGDQGAEALAKHLQGTN--LQEIDLRFNQISDRGAIALAQH 312

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           LQ    + TLNL  N IG +G   L   L D A +  L L    ++D G  A+A+ +K  
Sbjct: 313 LQKT-NIHTLNLKSNKIGAQGAIALVQHLKD-ARIHTLDLCENKIKDAGVIALAQYIKGT 370

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           S+   + L+ N I   G   LA+ L E + + +L+L  N    + A  L K L+G + + 
Sbjct: 371 SV-HTINLSKNKISVLGAMELAKHLQE-TNVHTLNLGYNL---IRAGQLVKHLQGTR-VH 424

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L+L+GN+I  +G+ AL   L      +  L +G+N + A+GA  + +Y+++  +L  + 
Sbjct: 425 TLNLNGNNIDGQGVIALTQYLEGTN--VQELCLGDNQMGAEGAIRLCKYLQST-NLEKLG 481

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N+IG+ GA ++A  L Q+  + T+DL  N I   GA  I + L+   V   L L++N
Sbjct: 482 LGSNEIGNVGAIELAKLL-QDTNVHTLDLSMNEIDDVGAIGIVQHLQGTKV-KELRLSFN 539

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG +GA  +++ L+    +  L LG  +I   GA  +   L+   T+  LDLR+N + D
Sbjct: 540 EIGTEGAIGIAQHLQG-TKVQELDLGHNRIDEEGAMQLGKYLQ-GTTVHTLDLRSNQIED 597

Query: 514 EGAKCLAQSF 523
              + L Q +
Sbjct: 598 GTQQLLQQQY 607



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 190/390 (48%), Gaps = 24/390 (6%)

Query: 157 FAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           FAK L+      VD+S    GD G   LA+ L   Q    +  + N I   G +A    L
Sbjct: 228 FAKHLQGTRVHVVDLSMNKMGDSGAEALAKHLQGTQ-VHTLDLSMNKIGDQGAEALAKHL 286

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           Q    L+ ++L  N I D G   L   L     +  L L S  +  +GA A+ + LK+  
Sbjct: 287 QGT-NLQEIDLRFNQISDRGAIALAQHL-QKTNIHTLNLKSNKIGAQGAIALVQHLKDAR 344

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           I   L+L  N I  +G  +LA+  ++ +++ +++L+ N    LGA  LAK       L+E
Sbjct: 345 I-HTLDLCENKIKDAGVIALAQ-YIKGTSVHTINLSKNKISVLGAMELAK------HLQE 396

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK--NCKSLLWI 392
            ++H  ++G   IRA       +  ++  L++  N+I  +G   + +Y++  N + L   
Sbjct: 397 TNVHTLNLGYNLIRAGQLVKHLQGTRVHTLNLNGNNIDGQGVIALTQYLEGTNVQELC-- 454

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L  N +G EGA ++   L Q+  +  + LG N I + GA  +A++L+D +V T LDL+ 
Sbjct: 455 -LGDNQMGAEGAIRLCKYL-QSTNLEKLGLGSNEIGNVGAIELAKLLQDTNVHT-LDLSM 511

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N I   GA  + + L+    +  L+L + +IG  GA  +A  L+    +  LDL  N + 
Sbjct: 512 NEIDDVGAIGIVQHLQG-TKVKELRLSFNEIGTEGAIGIAQHLQ-GTKVQELDLGHNRID 569

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +EGA  L +  +     + ++DL  N+I D
Sbjct: 570 EEGAMQLGKYLQ--GTTVHTLDLRSNQIED 597



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 161/323 (49%), Gaps = 33/323 (10%)

Query: 284 NMIDYSGFTSLAEALLENSTIRS------------LHLNGNYGGALGANALAKGLEGNKS 331
           ++ID SG+  + E   + S ++              HL G+      A +    L+GN +
Sbjct: 99  HIIDTSGWVKVKEVDFKYSNLKKDLTPATIPSFIFYHLMGHVRNL--AQSWWPYLQGN-N 155

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           +  L L  N +GD+G   L   L      +  +DI +N I  +G    A++++     + 
Sbjct: 156 IHTLGLSWNHLGDQGAIVLAQHLQGTN--VHTVDISDNQIGDQGLEGFAKHLQETNVHM- 212

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L  ++IGD+GAE  A  L+  R +  +DL  N +   GA A+A+ L+   V T LDL+
Sbjct: 213 VVLSRSEIGDQGAEGFAKHLQGTR-VHVVDLSMNKMGDSGAEALAKHLQGTQVHT-LDLS 270

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA+AL++ L+   N+  + L + QI   GA  +A  L+  N I  L+L++N +
Sbjct: 271 MNKIGDQGAEALAKHLQG-TNLQEIDLRFNQISDRGAIALAQHLQKTN-IHTLNLKSNKI 328

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
             +GA  L Q  K  +  + ++DL  N+I+D G  A+AQ +K     +V ++NL+ N ++
Sbjct: 329 GAQGAIALVQHLK--DARIHTLDLCENKIKDAGVIALAQYIKG---TSVHTINLSKNKIS 383

Query: 572 KFGQSALTDAKDLVYEMSEKEVN 594
             G      A +L   + E  V+
Sbjct: 384 VLG------AMELAKHLQETNVH 400


>gi|290981746|ref|XP_002673592.1| predicted protein [Naegleria gruberi]
 gi|284087177|gb|EFC40848.1| predicted protein [Naegleria gruberi]
          Length = 817

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 172/373 (46%), Gaps = 43/373 (11%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
           + A+++  +     +    N I   G++A    L+S   +K L+L  N +G E    + D
Sbjct: 60  YFAQTVSKDSPLHVLDLHENVIRDKGVQALIDELKSLNTVKILDLGSNDLGSESAILIAD 119

Query: 241 ILVD-NAGVERLQLSSVD-------LRDEGAKAIAELLKNNSILRVLELNNN----MIDY 288
            L   +  +E L L S D       +  EG  +IAE L +N  L  L+ N N        
Sbjct: 120 YLKKPDCKLESLILGSSDSDLYANKIEAEGGVSIAEALSSNFTLHTLDFNRNSQLGRKTQ 179

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
             F +LA+A  EN TI  L L     G++ A  + + LEGN +LR L LHGN +  + I 
Sbjct: 180 QAFFALADAFDENKTISCLRLGQTNMGSVAAVNVIQSLEGNSNLRYLDLHGNDLPVD-IA 238

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
             +  L+     L+VL + NN +   GA  +  ++K    +  +NL  N+IG+EGA  +A
Sbjct: 239 ESLGKLTCTCKNLSVLLLQNNCLKQTGAEILCNFLKQNTFITVLNLAGNEIGNEGASYVA 298

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKALSEVL 467
           D L    T+  ++L  N I  +G   IA+ +    + + SL+L+ N +G  GAKAL++ +
Sbjct: 299 DYLSCKHTLVYLNLSKNQITEEGIITIAQAINCPQNTLHSLNLSNNRVGNSGAKALAKCV 358

Query: 468 KF-HGNINTLKLGWCQIGASGA----------------------------EFVADMLRYN 498
           ++    I  L+L  C IG  GA                            + V D+L  N
Sbjct: 359 EYDQCGIVNLELNSCGIGDQGAVSLCLSLTCNTTLLYMKVHNNHISEEAGKAVLDLLEKN 418

Query: 499 NTISILDLRANGL 511
           +T+   D+R N L
Sbjct: 419 HTLMSFDVRGNQL 431



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 148/336 (44%), Gaps = 73/336 (21%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAK----GLEGNKSLRELHLHGNSIGDEGIR 348
           +L + L +N T     L     G   AN+LA+     +  +  L  L LH N I D+G++
Sbjct: 28  NLKQLLEKNCTEEKFILRSQRIGIATANSLARYFAQTVSKDSPLHVLDLHENVIRDKGVQ 87

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK--NCK--SLLW----INLYMNDIG 400
           AL+  L S    + +LD+G+N + ++ A  +A+Y+K  +CK  SL+      +LY N I 
Sbjct: 88  ALIDELKSL-NTVKILDLGSNDLGSESAILIADYLKKPDCKLESLILGSSDSDLYANKIE 146

Query: 401 DEGAEKIA--------------------------------DALKQNRTITTIDLGGNNIH 428
            EG   IA                                DA  +N+TI+ + LG  N+ 
Sbjct: 147 AEGGVSIAEALSSNFTLHTLDFNRNSQLGRKTQQAFFALADAFDENKTISCLRLGQTNMG 206

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGAD----------------------------GA 460
           S  A  + + L+ NS +  LDL  N +  D                            GA
Sbjct: 207 SVAAVNVIQSLEGNSNLRYLDLHGNDLPVDIAESLGKLTCTCKNLSVLLLQNNCLKQTGA 266

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
           + L   LK +  I  L L   +IG  GA +VAD L   +T+  L+L  N + +EG   +A
Sbjct: 267 EILCNFLKQNTFITVLNLAGNEIGNEGASYVADYLSCKHTLVYLNLSKNQITEEGIITIA 326

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           Q+       L S++L+ N + + GA A+A+ ++ ++
Sbjct: 327 QAINCPQNTLHSLNLSNNRVGNSGAKALAKCVEYDQ 362



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 171/388 (44%), Gaps = 48/388 (12%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           + F   +  +  L  L+L  N I D+GV+ L D L     V+ L L S DL  E A  IA
Sbjct: 59  RYFAQTVSKDSPLHVLDLHENVIRDKGVQALIDELKSLNTVKILDLGSNDLGSESAILIA 118

Query: 268 ELLKN-NSILRVL-------ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           + LK  +  L  L       +L  N I+  G  S+AEAL  N T+ +L  N N    LG 
Sbjct: 119 DYLKKPDCKLESLILGSSDSDLYANKIEAEGGVSIAEALSSNFTLHTLDFNRN--SQLGR 176

Query: 320 N------ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
                  ALA   + NK++                             + L +G  ++ +
Sbjct: 177 KTQQAFFALADAFDENKTI-----------------------------SCLRLGQTNMGS 207

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
             A +V + ++   +L +++L+ ND+  + AE +       + ++ + L  N +   GA 
Sbjct: 208 VAAVNVIQSLEGNSNLRYLDLHGNDLPVDIAESLGKLTCTCKNLSVLLLQNNCLKQTGAE 267

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            +   LK N+ IT L+LA N IG +GA  +++ L     +  L L   QI   G   +A 
Sbjct: 268 ILCNFLKQNTFITVLNLAGNEIGNEGASYVADYLSCKHTLVYLNLSKNQITEEGIITIAQ 327

Query: 494 MLRY-NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
            +    NT+  L+L  N + + GAK LA+  +     + +++L    I D GA ++  +L
Sbjct: 328 AINCPQNTLHSLNLSNNRVGNSGAKALAKCVEYDQCGIVNLELNSCGIGDQGAVSLCLSL 387

Query: 553 KANEDVAVTSLNLANNFLTKFGQSALTD 580
             N    +  + + NN +++    A+ D
Sbjct: 388 TCN--TTLLYMKVHNNHISEEAGKAVLD 413



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 136/312 (43%), Gaps = 11/312 (3%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI----TAAGIKAFDGVLQSNIAL 220
           S  D+       EG   +AE+L  N T   + F  N      T     A       N  +
Sbjct: 136 SDSDLYANKIEAEGGVSIAEALSSNFTLHTLDFNRNSQLGRKTQQAFFALADAFDENKTI 195

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
             L L    +G      +   L  N+ +  L L   DL  + A+++ +L      L VL 
Sbjct: 196 SCLRLGQTNMGSVAAVNVIQSLEGNSNLRYLDLHGNDLPVDIAESLGKLTCTCKNLSVLL 255

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L NN +  +G   L   L +N+ I  L+L GN  G  GA+ +A  L    +L  L+L  N
Sbjct: 256 LQNNCLKQTGAEILCNFLKQNTFITVLNLAGNEIGNEGASYVADYLSCKHTLVYLNLSKN 315

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK--NCKSLLWINLYMND 398
            I +EGI  +   ++  +  L  L++ NN +   GA  +A+ ++   C     +NL +N 
Sbjct: 316 QITEEGIITIAQAINCPQNTLHSLNLSNNRVGNSGAKALAKCVEYDQCG---IVNLELNS 372

Query: 399 --IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
             IGD+GA  +  +L  N T+  + +  N+I  +   A+  +L+ N  + S D+  N + 
Sbjct: 373 CGIGDQGAVSLCLSLTCNTTLLYMKVHNNHISEEAGKAVLDLLEKNHTLMSFDVRGNQLD 432

Query: 457 ADGAKALSEVLK 468
                 + +VL+
Sbjct: 433 HPTYLKIKKVLQ 444



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 7/270 (2%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS---NIALKTLNLSGNPIGDE 233
           +  F LA++   N+T   +S    G T  G  A   V+QS   N  L+ L+L GN +  +
Sbjct: 180 QAFFALADAFDENKT---ISCLRLGQTNMGSVAAVNVIQSLEGNSNLRYLDLHGNDLPVD 236

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
             + L  +      +  L L +  L+  GA+ +   LK N+ + VL L  N I   G + 
Sbjct: 237 IAESLGKLTCTCKNLSVLLLQNNCLKQTGAEILCNFLKQNTFITVLNLAGNEIGNEGASY 296

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK-SLRELHLHGNSIGDEGIRALMS 352
           +A+ L    T+  L+L+ N     G   +A+ +   + +L  L+L  N +G+ G +AL  
Sbjct: 297 VADYLSCKHTLVYLNLSKNQITEEGIITIAQAINCPQNTLHSLNLSNNRVGNSGAKALAK 356

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            +   +  +  L++ +  I  +GA  +   +    +LL++ ++ N I +E  + + D L+
Sbjct: 357 CVEYDQCGIVNLELNSCGIGDQGAVSLCLSLTCNTTLLYMKVHNNHISEEAGKAVLDLLE 416

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +N T+ + D+ GN +       I +VL+ N
Sbjct: 417 KNHTLMSFDVRGNQLDHPTYLKIKKVLQRN 446



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 30/186 (16%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L  F K+    + ++++G   G+EG  ++A+ L    T   ++ + N IT  GI    
Sbjct: 267 EILCNFLKQNTFITVLNLAGNEIGNEGASYVADYLSCKHTLVYLNLSKNQITEEGIITIA 326

Query: 212 GVLQS-NIALKTLNLSGNP-----------------------------IGDEGVKCLCDI 241
             +      L +LNLS N                              IGD+G   LC  
Sbjct: 327 QAINCPQNTLHSLNLSNNRVGNSGAKALAKCVEYDQCGIVNLELNSCGIGDQGAVSLCLS 386

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  +  +++ +  + +E  KA+ +LL+ N  L   ++  N +D+  +  + + L  N
Sbjct: 387 LTCNTTLLYMKVHNNHISEEAGKAVLDLLEKNHTLMSFDVRGNQLDHPTYLKIKKVLQRN 446

Query: 302 STIRSL 307
            T + L
Sbjct: 447 KTDKML 452


>gi|164639|gb|AAA63448.1| ribonuclease inhibitor, partial [Sus scrofa]
          Length = 375

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 156/319 (48%), Gaps = 10/319 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSN 217
           + L     + +S    GD GL  L E L   Q   E++      +TAA  +    VL++ 
Sbjct: 24  RSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCEPLASVLRAT 83

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSIL 276
            ALK L +S N IG+ G + L   L D+A  +E L+L +  L     K +  ++ + + L
Sbjct: 84  RALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLCGIVASQASL 143

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           R L+L +N +  +G   L   LL   S +++L L      A G   L + L+  ++L+EL
Sbjct: 144 RELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVLQAKETLKEL 203

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L GN +GDEG R L   L     +L  L + + S++A    HV+  +   K LL + L 
Sbjct: 204 SLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQNKHLLELQLS 263

Query: 396 MNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            N +GD G +++  AL Q   T+  + LG   + + G S++A +L  N  +  LDL+ N 
Sbjct: 264 SNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSLRELDLSNNC 323

Query: 455 IGADGAKALSEVLKFHGNI 473
           +G  G      VL+  G++
Sbjct: 324 VGDPG------VLQLLGSL 336



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 159/327 (48%), Gaps = 4/327 (1%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERL 251
           +++S     +T AG       L+S   L+ L+LS NP+GD G++ LC+ L+D    +E+L
Sbjct: 2   QKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKL 61

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLN 310
           QL    L     + +A +L+    L+ L ++NN I  +G   L + L +++  + +L L 
Sbjct: 62  QLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLE 121

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                      L   +    SLREL L  N +GD GI  L  GL S   +L  L +    
Sbjct: 122 NCGLTPANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECD 181

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHS 429
           I+A G   +   ++  ++L  ++L  N +GDEGA  + ++L Q    + ++ +   ++ +
Sbjct: 182 ITASGCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTA 241

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGA 488
                ++ +L  N  +  L L+ N +G  G + L + L   G  +  L LG C++  SG 
Sbjct: 242 ACCQHVSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGC 301

Query: 489 EFVADMLRYNNTISILDLRANGLRDEG 515
             +A +L  N ++  LDL  N + D G
Sbjct: 302 SSLASLLLANRSLRELDLSNNCVGDPG 328



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 5/330 (1%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRS 306
           +++L L +  L + G   +   L++   LR L L++N +  +G   L E LL+    +  
Sbjct: 1   IQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEK 60

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L      A     LA  L   ++L+EL +  N IG+ G R L  GL+    +L  L +
Sbjct: 61  LQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRL 120

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITTIDLGGN 425
            N  ++      +   + +  SL  ++L  N +GD G AE     L     + T+ L   
Sbjct: 121 ENCGLTPANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWEC 180

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIG 484
           +I + G   + RVL+    +  L LA N +G +GA+ L E L   G  + +L +  C + 
Sbjct: 181 DITASGCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLT 240

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
           A+  + V+ ML  N  +  L L +N L D G + L Q+       L  + L   E+ + G
Sbjct: 241 AACCQHVSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSG 300

Query: 545 AFAIAQALKANEDVAVTSLNLANNFLTKFG 574
             ++A  L AN   ++  L+L+NN +   G
Sbjct: 301 CSSLASLLLANR--SLRELDLSNNCVGDPG 328



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 3/272 (1%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGIT 203
           +L   S + L    +  RA   + +S  + G+ G   L + L  +    E +     G+T
Sbjct: 67  RLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLT 126

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEG 262
            A  K   G++ S  +L+ L+L  N +GD G+  LC  L+  A  ++ L L   D+   G
Sbjct: 127 PANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASG 186

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA 321
            + +  +L+    L+ L L  N +   G   L E+LL+    + SL +      A     
Sbjct: 187 CRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQH 246

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  L  NK L EL L  N +GD GI+ L   LS     L VL +G+  ++  G   +A 
Sbjct: 247 VSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLAS 306

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
            +   +SL  ++L  N +GD G  ++  +L+Q
Sbjct: 307 LLLANRSLRELDLSNNCVGDPGVLQLLGSLEQ 338


>gi|195997527|ref|XP_002108632.1| hypothetical protein TRIADDRAFT_51747 [Trichoplax adhaerens]
 gi|190589408|gb|EDV29430.1| hypothetical protein TRIADDRAFT_51747 [Trichoplax adhaerens]
          Length = 574

 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 132/234 (56%), Gaps = 1/234 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +G +G   L   L++N  VERL ++   ++++GA+AIAE+L+ N  +R L +++N I   
Sbjct: 204 LGPKGAIPLAYALLNNTKVERLIVADNYIKEDGAQAIAEMLQENMYIRELNISDNFIGSE 263

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  + A+ L  N+T+R+L + GN+     A   A  L+ N +L  L L  N  G+ G  +
Sbjct: 264 GANAFAKMLFSNTTLRTLIIKGNHITDQNAATFAGALKANTTLSYLDLSHNEFGELGAIS 323

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L +G++   G L V+D+  NSI  +G   +A+ ++   +L+ +NL  N I D GA  +A 
Sbjct: 324 LANGIAEN-GNLDVMDLSWNSIRGRGGVALAKSLRLNTTLVSLNLAWNGISDVGAFALAK 382

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            L++N T+  +D+  N I   GA  + + L  N+ +T   ++ NP+G  G +A+
Sbjct: 383 FLRKNTTLQRLDISNNRIGEIGAIKLGKCLGVNNALTHFKISTNPVGNKGVEAI 436



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 122/264 (46%), Gaps = 3/264 (1%)

Query: 161 LRAF--SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           LR F  S++ M     G +G   LA +L  N   E +  A N I   G +A   +LQ N+
Sbjct: 189 LRHFHESAIIMKHHGLGPKGAIPLAYALLNNTKVERLIVADNYIKEDGAQAIAEMLQENM 248

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            ++ LN+S N IG EG      +L  N  +  L +    + D+ A   A  LK N+ L  
Sbjct: 249 YIRELNISDNFIGSEGANAFAKMLFSNTTLRTLIIKGNHITDQNAATFAGALKANTTLSY 308

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L++N     G  SLA  + EN  +  + L+ N     G  ALAK L  N +L  L+L 
Sbjct: 309 LDLSHNEFGELGAISLANGIAENGNLDVMDLSWNSIRGRGGVALAKSLRLNTTLVSLNLA 368

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N I D G  AL   L  +   L  LDI NN I   GA  + + +    +L    +  N 
Sbjct: 369 WNGISDVGAFALAKFL-RKNTTLQRLDISNNRIGEIGAIKLGKCLGVNNALTHFKISTNP 427

Query: 399 IGDEGAEKIADALKQNRTITTIDL 422
           +G++G E I +  K N  +  + L
Sbjct: 428 VGNKGVEAILNGAKNNDLLKVLGL 451



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 3/219 (1%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           K+  L + +N I   GA  +AE ++    +  +N+  N IG EGA   A  L  N T+ T
Sbjct: 221 KVERLIVADNYIKEDGAQAIAEMLQENMYIRELNISDNFIGSEGANAFAKMLFSNTTLRT 280

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           + + GN+I  + A+  A  LK N+ ++ LDL++N  G  GA +L+  +  +GN++ + L 
Sbjct: 281 LIIKGNHITDQNAATFAGALKANTTLSYLDLSHNEFGELGAISLANGIAENGNLDVMDLS 340

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
           W  I   G   +A  LR N T+  L+L  NG+ D GA  LA+ F   N  L  +D++ N 
Sbjct: 341 WNSIRGRGGVALAKSLRLNTTLVSLNLAWNGISDVGAFALAK-FLRKNTTLQRLDISNNR 399

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           I + GA  + + L  N   A+T   ++ N +   G  A+
Sbjct: 400 IGEIGAIKLGKCLGVNN--ALTHFKISTNPVGNKGVEAI 436



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 113/204 (55%), Gaps = 3/204 (1%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           +  KGA  +A  + N   +  + +  N I ++GA+ IA+ L++N  I  +++  N I S+
Sbjct: 204 LGPKGAIPLAYALLNNTKVERLIVADNYIKEDGAQAIAEMLQENMYIRELNISDNFIGSE 263

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA+A A++L  N+ + +L +  N I    A   +  LK +  ++ L L   + G  GA  
Sbjct: 264 GANAFAKMLFSNTTLRTLIIKGNHITDQNAATFAGALKANTTLSYLDLSHNEFGELGAIS 323

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           +A+ +  N  + ++DL  N +R  G   LA+S + +N  L S++LA+N I D GAFA+A+
Sbjct: 324 LANGIAENGNLDVMDLSWNSIRGRGGVALAKSLR-LNTTLVSLNLAWNGISDVGAFALAK 382

Query: 551 ALKANEDVAVTSLNLANNFLTKFG 574
            L+ N    +  L+++NN + + G
Sbjct: 383 FLRKN--TTLQRLDISNNRIGEIG 404



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 1/233 (0%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  +E      +++S    G EG    A+ L  N T   +    N IT      F 
Sbjct: 238 QAIAEMLQENMYIRELNISDNFIGSEGANAFAKMLFSNTTLRTLIIKGNHITDQNAATFA 297

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           G L++N  L  L+LS N  G+ G   L + + +N  ++ + LS   +R  G  A+A+ L+
Sbjct: 298 GALKANTTLSYLDLSHNEFGELGAISLANGIAENGNLDVMDLSWNSIRGRGGVALAKSLR 357

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  L L  N I   G  +LA+ L +N+T++ L ++ N  G +GA  L K L  N +
Sbjct: 358 LNTTLVSLNLAWNGISDVGAFALAKFLRKNTTLQRLDISNNRIGEIGAIKLGKCLGVNNA 417

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           L    +  N +G++G+ A+++G +     L VL +   ++S K    + E ++
Sbjct: 418 LTHFKISTNPVGNKGVEAILNG-AKNNDLLKVLGLEEITVSRKMHDEIEELME 469



 Score = 43.1 bits (100), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 7/150 (4%)

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
            S + R   ++++I    + ++ +G  GA  L+  L  +  +  L +    I   GA+ +
Sbjct: 185 VSYLLRHFHESAII----MKHHGLGPKGAIPLAYALLNNTKVERLIVADNYIKEDGAQAI 240

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
           A+ML+ N  I  L++  N +  EGA   A+     N  L ++ +  N I D  A   A A
Sbjct: 241 AEMLQENMYIRELNISDNFIGSEGANAFAKML-FSNTTLRTLIIKGNHITDQNAATFAGA 299

Query: 552 LKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           LKAN    ++ L+L++N   + G  +L + 
Sbjct: 300 LKAN--TTLSYLDLSHNEFGELGAISLANG 327


>gi|390470959|ref|XP_003734396.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease inhibitor [Callithrix
           jacchus]
          Length = 460

 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 175/367 (47%), Gaps = 5/367 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
             + +++     GD G+  + ++L  +    +++SF    +T  G +   G L+S   L+
Sbjct: 56  VLTELNLRSNGLGDAGVHRILQALQSSSCKIQKLSFECCKLTVDGCRVLSGSLRSLPTLQ 115

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            LNL+ N + D G++ LC+ L+D    VE+LQL    L     + +A +L+     + L 
Sbjct: 116 ELNLTCNALKDAGLQLLCEGLLDPQCHVEKLQLEFCRLSSASCEPLASVLRAKPDFKELT 175

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           + NN  D +G   L + L E+   + +L L      +     L   L    SLREL L  
Sbjct: 176 VGNNDFDEAGIRVLCQGLKESPCQLETLKLERCGVTSDNCRDLCSILASKASLRELALGH 235

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N++GD GI  L  GL     +L  L I    ++AK    +   ++   SL  ++L  N +
Sbjct: 236 NNLGDMGIAELCPGLLHPSSRLRTLWIWECGLTAKSCEDLGRVLRAKDSLKELSLAGNKL 295

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA+ + ++ L+    + ++ +    + +   S  + VL  N  +  L ++ N +G  
Sbjct: 296 GDEGAQVLCESLLEPGCQLESLWVKYCGLTAACCSHFSSVLAQNKFLLELQISENRLGDA 355

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++  +L LG C +   G   +A  L  N+++  LDL  N + DEG +
Sbjct: 356 GVQELCQGLGQPGSVMRSLWLGECDVTDVGCLSLAKTLLANDSLRELDLSNNCMGDEGIQ 415

Query: 518 CLAQSFK 524
            L +S +
Sbjct: 416 MLLESLR 422



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 175/403 (43%), Gaps = 6/403 (1%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV-KCLCDI 241
           A+ L   Q    V      +T A  +     LQ+N  L  LNL  N +GD GV + L  +
Sbjct: 20  AKLLPLLQQCHTVRLDDCSLTEAHCEGISSALQANPVLTELNLRSNGLGDAGVHRILQAL 79

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
              +  +++L      L  +G + ++  L++   L+ L L  N +  +G   L E LL+ 
Sbjct: 80  QSSSCKIQKLSFECCKLTVDGCRVLSGSLRSLPTLQELNLTCNALKDAGLQLLCEGLLDP 139

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      +     LA  L      +EL +  N   + GIR L  GL     +
Sbjct: 140 QCHVEKLQLEFCRLSSASCEPLASVLRAKPDFKELTVGNNDFDEAGIRVLCQGLKESPCQ 199

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITT 419
           L  L +    +++     +   + +  SL  + L  N++GD G AE     L  +  + T
Sbjct: 200 LETLKLERCGVTSDNCRDLCSILASKASLRELALGHNNLGDMGIAELCPGLLHPSSRLRT 259

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + +    + +K    + RVL+    +  L LA N +G +GA+ L E L   G  + +L +
Sbjct: 260 LWIWECGLTAKSCEDLGRVLRAKDSLKELSLAGNKLGDEGAQVLCESLLEPGCQLESLWV 319

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
            +C + A+     + +L  N  +  L +  N L D G + L Q        + S+ L   
Sbjct: 320 KYCGLTAACCSHFSSVLAQNKFLLELQISENRLGDAGVQELCQGLGQPGSVMRSLWLGEC 379

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           ++ D G  ++A+ L AN+  ++  L+L+NN +   G   L ++
Sbjct: 380 DVTDVGCLSLAKTLLAND--SLRELDLSNNCMGDEGIQMLLES 420



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 123/275 (44%), Gaps = 6/275 (2%)

Query: 145 KLFRESKQTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAAN 200
           +  R S  +    A  LRA   F  + +   +F + G+  L + L  +    E +     
Sbjct: 149 EFCRLSSASCEPLASVLRAKPDFKELTVGNNDFDEAGIRVLCQGLKESPCQLETLKLERC 208

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLR 259
           G+T+   +    +L S  +L+ L L  N +GD G+  LC  +L  ++ +  L +    L 
Sbjct: 209 GVTSDNCRDLCSILASKASLRELALGHNNLGDMGIAELCPGLLHPSSRLRTLWIWECGLT 268

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALG 318
            +  + +  +L+    L+ L L  N +   G   L E+LLE    + SL +      A  
Sbjct: 269 AKSCEDLGRVLRAKDSLKELSLAGNKLGDEGAQVLCESLLEPGCQLESLWVKYCGLTAAC 328

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            +  +  L  NK L EL +  N +GD G++ L  GL      +  L +G   ++  G   
Sbjct: 329 CSHFSSVLAQNKFLLELQISENRLGDAGVQELCQGLGQPGSVMRSLWLGECDVTDVGCLS 388

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           +A+ +    SL  ++L  N +GDEG + + ++L+Q
Sbjct: 389 LAKTLLANDSLRELDLSNNCMGDEGIQMLLESLRQ 423



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 77/161 (47%), Gaps = 9/161 (5%)

Query: 150 SKQTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESL---GYNQTAEEVSFAANGIT 203
           + ++  +  + LRA      + ++G   GDEG   L ESL   G    +  V +   G+T
Sbjct: 268 TAKSCEDLGRVLRAKDSLKELSLAGNKLGDEGAQVLCESLLEPGCQLESLWVKYC--GLT 325

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEG 262
           AA    F  VL  N  L  L +S N +GD GV+ LC  L     V R L L   D+ D G
Sbjct: 326 AACCSHFSSVLAQNKFLLELQISENRLGDAGVQELCQGLGQPGSVMRSLWLGECDVTDVG 385

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
             ++A+ L  N  LR L+L+NN +   G   L E+L + S 
Sbjct: 386 CLSLAKTLLANDSLRELDLSNNCMGDEGIQMLLESLRQPSC 426


>gi|405975326|gb|EKC39900.1| hypothetical protein CGI_10016632 [Crassostrea gigas]
          Length = 601

 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 134/238 (56%), Gaps = 4/238 (1%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           +E  +  + +G  G +A+   L + K K+  +++  N I A+G+ ++A+ +KN   +  +
Sbjct: 176 KEFSMKYHGLGPNGAKAIAWPLKTNK-KIEKINLEGNWIEAEGSIYLAKMLKNNIYVTEL 234

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG+EGAE I+D L++N  I ++DL GN+I   GA  + RVL  NS I  L LA 
Sbjct: 235 HLAENRIGNEGAEAISDMLQKNDMIYSLDLSGNSIEDYGAEKLCRVLLKNSSIKHLYLAN 294

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N      A  L EVL  +  + T+ L W  +   GA  +A+ ++ N  + IL+L  NG  
Sbjct: 295 NKFEERAAGWLREVLTNNETLETVDLSWNHLRTRGAIAIAEGVQENYGLRILNLAMNGFA 354

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
            +G++ + ++ K  N  L  +DL+ N I + GA AI+Q L+ N+ + V  L +A+N L
Sbjct: 355 QDGSEAMGKALK-NNRTLLELDLSHNRIPEAGATAISQGLQHNDTLKV--LRVASNPL 409



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 136/275 (49%), Gaps = 29/275 (10%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           +E S   +G+   G KA    L++N  ++ +NL GN I  EG   L  +L +N  V  L 
Sbjct: 176 KEFSMKYHGLGPNGAKAIAWPLKTNKKIEKINLEGNWIEAEGSIYLAKMLKNNIYVTELH 235

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+   + +EGA+AI+++L+ N ++  L+L+ N I+  G   L   LL+NS+I+ L+L  N
Sbjct: 236 LAENRIGNEGAEAISDMLQKNDMIYSLDLSGNSIEDYGAEKLCRVLLKNSSIKHLYLANN 295

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                 A  L + L  N++L                               +D+  N + 
Sbjct: 296 KFEERAAGWLREVLTNNETLE-----------------------------TVDLSWNHLR 326

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            +GA  +AE ++    L  +NL MN    +G+E +  ALK NRT+  +DL  N I   GA
Sbjct: 327 TRGAIAIAEGVQENYGLRILNLAMNGFAQDGSEAMGKALKNNRTLLELDLSHNRIPEAGA 386

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           +AI++ L+ N  +  L +A NP+G +G   L  V+
Sbjct: 387 TAISQGLQHNDTLKVLRVASNPLGGEGPLELLNVI 421



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 1/222 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +    +++ G     EG  +LA+ L  N    E+  A N I   G +A   +LQ N  + 
Sbjct: 201 KKIEKINLEGNWIEAEGSIYLAKMLKNNIYVTELHLAENRIGNEGAEAISDMLQKNDMIY 260

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L+LSGN I D G + LC +L+ N+ ++ L L++    +  A  + E+L NN  L  ++L
Sbjct: 261 SLDLSGNSIEDYGAEKLCRVLLKNSSIKHLYLANNKFEERAAGWLREVLTNNETLETVDL 320

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N +   G  ++AE + EN  +R L+L  N     G+ A+ K L+ N++L EL L  N 
Sbjct: 321 SWNHLRTRGAIAIAEGVQENYGLRILNLAMNGFAQDGSEAMGKALKNNRTLLELDLSHNR 380

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           I + G  A+  GL      L VL + +N +  +G   +   I
Sbjct: 381 IPEAGATAISQGL-QHNDTLKVLRVASNPLGGEGPLELLNVI 421



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 11/225 (4%)

Query: 365 DIGNNSISAKGAFHVAE--------YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           +I N+    K   H+ E        Y  N       ++  + +G  GA+ IA  LK N+ 
Sbjct: 143 EIENDKTGEKKYLHMCEETGVIPASYFLNHIQEKEFSMKYHGLGPNGAKAIAWPLKTNKK 202

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I  I+L GN I ++G+  +A++LK+N  +T L LA N IG +GA+A+S++L+ +  I +L
Sbjct: 203 IEKINLEGNWIEAEGSIYLAKMLKNNIYVTELHLAENRIGNEGAEAISDMLQKNDMIYSL 262

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L    I   GAE +  +L  N++I  L L  N   +  A  L +     NE L ++DL+
Sbjct: 263 DLSGNSIEDYGAEKLCRVLLKNSSIKHLYLANNKFEERAAGWLREVL-TNNETLETVDLS 321

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           +N +R  GA AIA+ ++ N  + +  LNLA N   + G  A+  A
Sbjct: 322 WNHLRTRGAIAIAEGVQENYGLRI--LNLAMNGFAQDGSEAMGKA 364



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 3/256 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M     G  G   +A  L  N+  E+++   N I A G      +L++NI +  L+L+ N
Sbjct: 180 MKYHGLGPNGAKAIAWPLKTNKKIEKINLEGNWIEAEGSIYLAKMLKNNIYVTELHLAEN 239

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG+EG + + D+L  N  +  L LS   + D GA+ +  +L  NS ++ L L NN  + 
Sbjct: 240 RIGNEGAEAISDMLQKNDMIYSLDLSGNSIEDYGAEKLCRVLLKNSSIKHLYLANNKFEE 299

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
                L E L  N T+ ++ L+ N+    GA A+A+G++ N  LR L+L  N    +G  
Sbjct: 300 RAAGWLREVLTNNETLETVDLSWNHLRTRGAIAIAEGVQENYGLRILNLAMNGFAQDGSE 359

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+   L + +  L  LD+ +N I   GA  +++ +++  +L  + +  N +G EG  ++ 
Sbjct: 360 AMGKALKNNR-TLLELDLSHNRIPEAGATAISQGLQHNDTLKVLRVASNPLGGEGPLELL 418

Query: 409 DALKQN--RTITTIDL 422
           + + +N    I  +DL
Sbjct: 419 NVIAKNDMSEIRVLDL 434



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 29/202 (14%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+SG                            N I   G +    VL  N ++K L L
Sbjct: 261 SLDLSG----------------------------NSIEDYGAEKLCRVLLKNSSIKHLYL 292

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           + N   +     L ++L +N  +E + LS   LR  GA AIAE ++ N  LR+L L  N 
Sbjct: 293 ANNKFEERAAGWLREVLTNNETLETVDLSWNHLRTRGAIAIAEGVQENYGLRILNLAMNG 352

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G  ++ +AL  N T+  L L+ N     GA A+++GL+ N +L+ L +  N +G E
Sbjct: 353 FAQDGSEAMGKALKNNRTLLELDLSHNRIPEAGATAISQGLQHNDTLKVLRVASNPLGGE 412

Query: 346 GIRALMSGLSSRK-GKLAVLDI 366
           G   L++ ++     ++ VLD+
Sbjct: 413 GPLELLNVIAKNDMSEIRVLDL 434



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 5/157 (3%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
              +VD+S  +    G   +AE +  N     ++ A NG    G +A    L++N  L  
Sbjct: 314 TLETVDLSWNHLRTRGAIAIAEGVQENYGLRILNLAMNGFAQDGSEAMGKALKNNRTLLE 373

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI--LRVLE 280
           L+LS N I + G   +   L  N  ++ L+++S  L  EG   +  ++  N +  +RVL+
Sbjct: 374 LDLSHNRIPEAGATAISQGLQHNDTLKVLRVASNPLGGEGPLELLNVIAKNDMSEIRVLD 433

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           L + ++    F  L ++ LE   I +++  GN  G +
Sbjct: 434 LTDVLV-TPAFKELQQS-LEKDRILTVYF-GNVVGEI 467


>gi|301788230|ref|XP_002929526.1| PREDICTED: ribonuclease inhibitor-like [Ailuropoda melanoleuca]
          Length = 456

 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 182/413 (44%), Gaps = 9/413 (2%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+  +   D       E L   Q +E V     G+T    K     LQ+N +L  L+L
Sbjct: 2   SLDIQCQQLSDA---RWTELLPLLQQSEVVRLDDCGLTEMRCKDISSALQANPSLTELSL 58

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV  +   L      + +L L +  L   G   + ++L++   LR L LN+N
Sbjct: 59  CTNELGDAGVHLVLQGLQSPTCKIRKLSLQNCCLTKTGCGVLPDMLRSMPTLRELYLNDN 118

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L   LL+    +  L +      A    +LA  L   +  +EL +  N +G
Sbjct: 119 PLGDAGLQLLCSGLLDPQCHLEKLQVEYCNLTAASCESLASALRAKRHFKELAVSNNELG 178

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G+R L  GL     +L VL + N  +++     +   + +  SL  ++L  N +GD+G
Sbjct: 179 EAGVRVLCRGLVDSACQLEVLKLENCGLTSASCEDLCGVVASKPSLQELDLGDNKLGDQG 238

Query: 404 AEKIAD-ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              +    L  +  I  + L   +I + G   + RVL+    +  + LA N +G +GA+ 
Sbjct: 239 IATLCPRLLHPSCQIRVLWLWDCDITTAGCRDLCRVLRAKESLKEMSLAGNALGDEGARL 298

Query: 463 LSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           L E +L+    + +L +  C   A+  +  + ML  N  +  L L  N L D G + L Q
Sbjct: 299 LCESLLEPACQLQSLWVKSCSFTAASCQHFSSMLTRNTCLVELQLSNNKLGDCGVQQLCQ 358

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
                  AL  + L   ++   G  ++A  L  N   ++  L+L+NN + + G
Sbjct: 359 GLSQPGAALQVLWLGDCDVAHSGCASLASVLLVNR--SLRELDLSNNCMGEEG 409



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 151/325 (46%), Gaps = 4/325 (1%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
            L +  + +     + ++    GD GL  L   L   Q   E++      +TAA  ++  
Sbjct: 99  VLPDMLRSMPTLRELYLNDNPLGDAGLQLLCSGLLDPQCHLEKLQVEYCNLTAASCESLA 158

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
             L++    K L +S N +G+ GV+ LC  LVD+A  +E L+L +  L     + +  ++
Sbjct: 159 SALRAKRHFKELAVSNNELGEAGVRVLCRGLVDSACQLEVLKLENCGLTSASCEDLCGVV 218

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGN 329
            +   L+ L+L +N +   G  +L   LL  S  IR L L        G   L + L   
Sbjct: 219 ASKPSLQELDLGDNKLGDQGIATLCPRLLHPSCQIRVLWLWDCDITTAGCRDLCRVLRAK 278

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +SL+E+ L GN++GDEG R L   L     +L  L + + S +A    H +  +     L
Sbjct: 279 ESLKEMSLAGNALGDEGARLLCESLLEPACQLQSLWVKSCSFTAASCQHFSSMLTRNTCL 338

Query: 390 LWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           + + L  N +GD G +++   L Q    +  + LG  ++   G +++A VL  N  +  L
Sbjct: 339 VELQLSNNKLGDCGVQQLCQGLSQPGAALQVLWLGDCDVAHSGCASLASVLLVNRSLREL 398

Query: 449 DLAYNPIGADGAKALSEVLKFHGNI 473
           DL+ N +G +G   L E ++  G +
Sbjct: 399 DLSNNCMGEEGILRLMESVEQPGCV 423



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 182/394 (46%), Gaps = 8/394 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + + L        ++S     +T  G      +L+S   L+
Sbjct: 52  SLTELSLCTNELGDAGVHLVLQGLQSPTCKIRKLSLQNCCLTKTGCGVLPDMLRSMPTLR 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L L+ NP+GD G++ LC  L+D    +E+LQ+   +L     +++A  L+     + L 
Sbjct: 112 ELYLNDNPLGDAGLQLLCSGLLDPQCHLEKLQVEYCNLTAASCESLASALRAKRHFKELA 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN +  +G   L   L++++  +  L L      +     L   +    SL+EL L  
Sbjct: 172 VSNNELGEAGVRVLCRGLVDSACQLEVLKLENCGLTSASCEDLCGVVASKPSLQELDLGD 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD+GI  L   L     ++ VL + +  I+  G   +   ++  +SL  ++L  N +
Sbjct: 232 NKLGDQGIATLCPRLLHPSCQIRVLWLWDCDITTAGCRDLCRVLRAKESLKEMSLAGNAL 291

Query: 400 GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + ++L +    + ++ +   +  +      + +L  N+ +  L L+ N +G  
Sbjct: 292 GDEGARLLCESLLEPACQLQSLWVKSCSFTAASCQHFSSMLTRNTCLVELQLSNNKLGDC 351

Query: 459 GAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G  +  L LG C +  SG   +A +L  N ++  LDL  N + +EG  
Sbjct: 352 GVQQLCQGLSQPGAALQVLWLGDCDVAHSGCASLASVLLVNRSLRELDLSNNCMGEEGIL 411

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDDGAFAI 548
            L +S +    V E L   D+ ++E  D+   A+
Sbjct: 412 RLMESVEQPGCVLEQLVLYDIYWSEEMDNSLRAL 445


>gi|320169052|gb|EFW45951.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 206

 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD+GAE IA+ALK N T++ +DLG N I   GA +IA  LK N+ +T+L L  N IG  
Sbjct: 46  IGDDGAEAIAEALKVNTTMSELDLGKNQIGVAGAQSIAEALKVNTTLTTLYLDRNQIGDA 105

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA+A++E LK +  +N L L  C IG +G   +A+ L+ N T+++L L  N + D GA+ 
Sbjct: 106 GAEAIAEALKVNTTVNVLDLRLCHIGYAGVLALAEALKVNTTVTMLYLGKNAIGDAGAQA 165

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
           +A++ K VN  LT ++L  N I + G  AI +ALK
Sbjct: 166 IAETLK-VNTTLTWLNLPQNCIGNSGTRAIVEALK 199



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 92/160 (57%), Gaps = 3/160 (1%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           LG   I   GA AIA  LK N+ ++ LDL  N IG  GA++++E LK +  + TL L   
Sbjct: 41  LGDRQIGDDGAEAIAEALKVNTTMSELDLGKNQIGVAGAQSIAEALKVNTTLTTLYLDRN 100

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           QIG +GAE +A+ L+ N T+++LDLR   +   G   LA++ KV N  +T + L  N I 
Sbjct: 101 QIGDAGAEAIAEALKVNTTVNVLDLRLCHIGYAGVLALAEALKV-NTTVTMLYLGKNAIG 159

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           D GA AIA+ LK N    +T LNL  N +   G  A+ +A
Sbjct: 160 DAGAQAIAETLKVN--TTLTWLNLPQNCIGNSGTRAIVEA 197



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 97/199 (48%), Gaps = 29/199 (14%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           EF      ++S+ +  R  GD+G   +AE+L  N T  E+    N I  AG ++    L+
Sbjct: 29  EFNIAKYMYASI-LGDRQIGDDGAEAIAEALKVNTTMSELDLGKNQIGVAGAQSIAEALK 87

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N  L TL L  N IGD G                            A+AIAE LK N+ 
Sbjct: 88  VNTTLTTLYLDRNQIGDAG----------------------------AEAIAEALKVNTT 119

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + VL+L    I Y+G  +LAEAL  N+T+  L+L  N  G  GA A+A+ L+ N +L  L
Sbjct: 120 VNVLDLRLCHIGYAGVLALAEALKVNTTVTMLYLGKNAIGDAGAQAIAETLKVNTTLTWL 179

Query: 336 HLHGNSIGDEGIRALMSGL 354
           +L  N IG+ G RA++  L
Sbjct: 180 NLPQNCIGNSGTRAIVEAL 198



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 1/155 (0%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD+G  A+   L      ++ LD+G N I   GA  +AE +K   +L  + L  N IGD
Sbjct: 46  IGDDGAEAIAEALKVNT-TMSELDLGKNQIGVAGAQSIAEALKVNTTLTTLYLDRNQIGD 104

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GAE IA+ALK N T+  +DL   +I   G  A+A  LK N+ +T L L  N IG  GA+
Sbjct: 105 AGAEAIAEALKVNTTVNVLDLRLCHIGYAGVLALAEALKVNTTVTMLYLGKNAIGDAGAQ 164

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           A++E LK +  +  L L    IG SG   + + L+
Sbjct: 165 AIAETLKVNTTLTWLNLPQNCIGNSGTRAIVEALK 199



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 85/162 (52%), Gaps = 1/162 (0%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L +  I   G  ++AEAL  N+T+  L L  N  G  GA ++A+ L+ N +L  L+L  N
Sbjct: 41  LGDRQIGDDGAEAIAEALKVNTTMSELDLGKNQIGVAGAQSIAEALKVNTTLTTLYLDRN 100

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD G  A+   L      + VLD+    I   G   +AE +K   ++  + L  N IG
Sbjct: 101 QIGDAGAEAIAEALKVNT-TVNVLDLRLCHIGYAGVLALAEALKVNTTVTMLYLGKNAIG 159

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           D GA+ IA+ LK N T+T ++L  N I + G  AI   LKD+
Sbjct: 160 DAGAQAIAETLKVNTTLTWLNLPQNCIGNSGTRAIVEALKDS 201



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 29/188 (15%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L    IGD+G + + + L  N  +  L L    +   GA++IAE LK N+ L  L L+ N
Sbjct: 41  LGDRQIGDDGAEAIAEALKVNTTMSELDLGKNQIGVAGAQSIAEALKVNTTLTTLYLDRN 100

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  ++AEAL  N+T+  L L   + G  G  ALA+ L+ N ++  L+L  N+IGD
Sbjct: 101 QIGDAGAEAIAEALKVNTTVNVLDLRLCHIGYAGVLALAEALKVNTTVTMLYLGKNAIGD 160

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G +A                             +AE +K   +L W+NL  N IG+ G 
Sbjct: 161 AGAQA-----------------------------IAETLKVNTTLTWLNLPQNCIGNSGT 191

Query: 405 EKIADALK 412
             I +ALK
Sbjct: 192 RAIVEALK 199


>gi|291227715|ref|XP_002733824.1| PREDICTED: nucleotide-binding oligomerization domain containing
           1-like [Saccoglossus kowalevskii]
          Length = 418

 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 155/295 (52%), Gaps = 7/295 (2%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           + D+ ++ L + L +NA +  + L   ++ D GA+ IA+LL+   +LR + L  N I  +
Sbjct: 67  LTDDDMRPLYETLKNNAYIHSMDLRYNNIGDTGAEYIAKLLEETVVLRSVNLMCNDIGEA 126

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   +A+A   N T+ SL LNGN  G  G  A A  L+ N +L EL L     G E + A
Sbjct: 127 GAKVIAKAFQTNETLVSLKLNGNKIGNKGGMAFAGVLQVNNTLEELDLGDTDQGTESVIA 186

Query: 350 LMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           L + L+  K  +  L++      S   +   H+A  +K   +L  ++L   DI D GAE+
Sbjct: 187 LATVLNQNKS-IRALNVNRPLLFSHQEETTVHMARMLKVTSTLQELHLQKCDIRDFGAER 245

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           ++DAL  N ++  +D+  N I   GA  ++++LK N+ +  LDL +N I  DGAK L++ 
Sbjct: 246 LSDALIDNSSLKYLDVSCNRITRDGAKHLSKLLKHNTPLQILDLGFNRIEDDGAKHLADA 305

Query: 467 L-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
           L +F+  +  L +   QI   G   +A  ++ N +++ + +  N L  E   C+A
Sbjct: 306 LGQFNTCLTHLVITTNQIKGPGVCAIAKAMKLNISLNNVYIWGNNL--ETPACVA 358



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 153/354 (43%), Gaps = 12/354 (3%)

Query: 119 RPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEG 178
           R  K   + M+  +    +L++    +L  +  + L E  K      S+D+   N GD G
Sbjct: 42  RKGKEPKDYMDLVLPGNNHLITNI--RLTDDDMRPLYETLKNNAYIHSMDLRYNNIGDTG 99

Query: 179 LFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCL 238
             ++A+ L        V+   N I  AG K      Q+N  L +L L+GN IG++G    
Sbjct: 100 AEYIAKLLEETVVLRSVNLMCNDIGEAGAKVIAKAFQTNETLVSLKLNGNKIGNKGGMAF 159

Query: 239 CDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI---DYSGFTSLA 295
             +L  N  +E L L   D   E   A+A +L  N  +R L +N  ++          +A
Sbjct: 160 AGVLQVNNTLEELDLGDTDQGTESVIALATVLNQNKSIRALNVNRPLLFSHQEETTVHMA 219

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
             L   ST++ LHL        GA  L+  L  N SL+ L +  N I  +G + L S L 
Sbjct: 220 RMLKVTSTLQELHLQKCDIRDFGAERLSDALIDNSSLKYLDVSCNRITRDGAKHL-SKLL 278

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYI---KNCKSLLWINLYMNDIGDEGAEKIADALK 412
                L +LD+G N I   GA H+A+ +     C + L I    N I   G   IA A+K
Sbjct: 279 KHNTPLQILDLGFNRIEDDGAKHLADALGQFNTCLTHLVIT--TNQIKGPGVCAIAKAMK 336

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
            N ++  + + GNN+ +    A   ++ +   +   +    P   DG   LSE+
Sbjct: 337 LNISLNNVYIWGNNLETPACVAFNELI-ETERLDQRNTDVKPYVVDGVVYLSEI 389



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 9/286 (3%)

Query: 278 VLELNNNMIDYSGFTS-----LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           VL  NN++I     T      L E L  N+ I S+ L  N  G  GA  +AK LE    L
Sbjct: 54  VLPGNNHLITNIRLTDDDMRPLYETLKNNAYIHSMDLRYNNIGDTGAEYIAKLLEETVVL 113

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R ++L  N IG+ G + +     + +  L  L +  N I  KG    A  ++   +L  +
Sbjct: 114 RSVNLMCNDIGEAGAKVIAKAFQTNE-TLVSLKLNGNKIGNKGGMAFAGVLQVNNTLEEL 172

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA---IARVLKDNSVITSLD 449
           +L   D G E    +A  L QN++I  +++    + S        +AR+LK  S +  L 
Sbjct: 173 DLGDTDQGTESVIALATVLNQNKSIRALNVNRPLLFSHQEETTVHMARMLKVTSTLQELH 232

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L    I   GA+ LS+ L  + ++  L +   +I   GA+ ++ +L++N  + ILDL  N
Sbjct: 233 LQKCDIRDFGAERLSDALIDNSSLKYLDVSCNRITRDGAKHLSKLLKHNTPLQILDLGFN 292

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            + D+GAK LA +    N  LT + +  N+I+  G  AIA+A+K N
Sbjct: 293 RIEDDGAKHLADALGQFNTCLTHLVITTNQIKGPGVCAIAKAMKLN 338



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 130/281 (46%), Gaps = 35/281 (12%)

Query: 336 HLHGN-SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           HL  N  + D+ +R L   L +    +  +D+  N+I   GA ++A+ ++    L  +NL
Sbjct: 60  HLITNIRLTDDDMRPLYETLKN-NAYIHSMDLRYNNIGDTGAEYIAKLLEETVVLRSVNL 118

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             NDIG+ GA+ IA A + N T+ ++ L GN I +KG  A A VL+ N+ +  LDL    
Sbjct: 119 MCNDIGEAGAKVIAKAFQTNETLVSLKLNGNKIGNKGGMAFAGVLQVNNTLEELDLGDTD 178

Query: 455 IGADGAKALSEV-------------------------------LKFHGNINTLKLGWCQI 483
            G +   AL+ V                               LK    +  L L  C I
Sbjct: 179 QGTESVIALATVLNQNKSIRALNVNRPLLFSHQEETTVHMARMLKVTSTLQELHLQKCDI 238

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
              GAE ++D L  N+++  LD+  N +  +GAK L++  K  N  L  +DL FN I DD
Sbjct: 239 RDFGAERLSDALIDNSSLKYLDVSCNRITRDGAKHLSKLLK-HNTPLQILDLGFNRIEDD 297

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           GA  +A AL    +  +T L +  N +   G  A+  A  L
Sbjct: 298 GAKHLADAL-GQFNTCLTHLVITTNQIKGPGVCAIAKAMKL 337


>gi|281201664|gb|EFA75872.1| leucine-rich repeat-containing protein [Polysphondylium pallidum
           PN500]
          Length = 798

 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 190/377 (50%), Gaps = 5/377 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            + + +     N  DE +  + ++L  N T + + F  N +      +  G L  N +L 
Sbjct: 392 HSITHISFRNNNLDDEFVVDIIQALHENNTIQILDFRLNKLGNQTAISLAGALLKNRSLT 451

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            ++L  N IG EG   + + L  N  + +L L    +  + A  ++E LK N+++  + L
Sbjct: 452 CVDLFYNAIGPEGGVAIANSLRTNRTLRKLYLGWNHINGQTASILSESLKVNNVIESIYL 511

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +  + D+SG + LAE+L  N+++  L+L         A AL    + NKSL +L+   N 
Sbjct: 512 DR-IDDHSG-SLLAESLAVNTSVTELNLADCQLKQFTAKALGSAFKVNKSLADLNFRCNQ 569

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +G + ++ +   LS     L  +++ +N I+ +    +AE +K   S+  ++L +N +G+
Sbjct: 570 LGAD-LKDISQSLSVNH-TLTRINLSDNRINDESGRLLAESLKTNHSITSLSLSLNQLGN 627

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           + A+++  AL +N T+  +DL  N I   GA  IA  L  NS +  L+L  N + +    
Sbjct: 628 KFADEMGVALLENTTLKLLDLSNNQIEFTGAQHIANALASNSTLKLLNLCQNSLSSKFGP 687

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            ++  L  + ++  L+L +  IG++GA  +A  ++ N  +  L+L  N + D+GA   A 
Sbjct: 688 LIAYSLTQNKSLTHLELAYVGIGSAGAVSLAKAVKDNIHLRKLNLSENQIGDDGALAFAD 747

Query: 522 SFKVVNEALTSIDLAFN 538
           + K  N+ L  +DL++N
Sbjct: 748 AIK-SNQFLYVLDLSYN 763



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 190/390 (48%), Gaps = 10/390 (2%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +  +L  N +   +SF  N +    +      L  N  ++ L+   N +G++    L   
Sbjct: 384 IGHALRTNHSITHISFRNNNLDDEFVVDIIQALHENNTIQILDFRLNKLGNQTAISLAGA 443

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L+ N  +  + L    +  EG  AIA  L+ N  LR L L  N I+    + L+E+L  N
Sbjct: 444 LLKNRSLTCVDLFYNAIGPEGGVAIANSLRTNRTLRKLYLGWNHINGQTASILSESLKVN 503

Query: 302 STIRSLHLN--GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
           + I S++L+   ++ G+L    LA+ L  N S+ EL+L    +     +AL S     K 
Sbjct: 504 NVIESIYLDRIDDHSGSL----LAESLAVNTSVTELNLADCQLKQFTAKALGSAFKVNKS 559

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
            LA L+   N + A     +++ +    +L  INL  N I DE    +A++LK N +IT+
Sbjct: 560 -LADLNFRCNQLGADLK-DISQSLSVNHTLTRINLSDNRINDESGRLLAESLKTNHSITS 617

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           + L  N + +K A  +   L +N+ +  LDL+ N I   GA+ ++  L  +  +  L L 
Sbjct: 618 LSLSLNQLGNKFADEMGVALLENTTLKLLDLSNNQIEFTGAQHIANALASNSTLKLLNLC 677

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
              + +     +A  L  N +++ L+L   G+   GA  LA++ K  N  L  ++L+ N+
Sbjct: 678 QNSLSSKFGPLIAYSLTQNKSLTHLELAYVGIGSAGAVSLAKAVK-DNIHLRKLNLSENQ 736

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNF 569
           I DDGA A A A+K+N+ + V  L+  NNF
Sbjct: 737 IGDDGALAFADAIKSNQFLYVLDLSY-NNF 765



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 158/344 (45%), Gaps = 12/344 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ + VD+     G EG   +A SL  N+T  ++    N I           L+ N  ++
Sbjct: 448 RSLTCVDLFYNAIGPEGGVAIANSLRTNRTLRKLYLGWNHINGQTASILSESLKVNNVIE 507

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           ++ L  + I D     L + L  N  V  L L+   L+   AKA+    K N  L  L  
Sbjct: 508 SIYL--DRIDDHSGSLLAESLAVNTSVTELNLADCQLKQFTAKALGSAFKVNKSLADLNF 565

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH--- 338
             N +  +    ++++L  N T+  ++L+ N         LA+ L+ N S+  L L    
Sbjct: 566 RCNQLG-ADLKDISQSLSVNHTLTRINLSDNRINDESGRLLAESLKTNHSITSLSLSLNQ 624

Query: 339 -GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            GN   DE   AL+   +     L +LD+ NN I   GA H+A  + +  +L  +NL  N
Sbjct: 625 LGNKFADEMGVALLENTT-----LKLLDLSNNQIEFTGAQHIANALASNSTLKLLNLCQN 679

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            +  +    IA +L QN+++T ++L    I S GA ++A+ +KDN  +  L+L+ N IG 
Sbjct: 680 SLSSKFGPLIAYSLTQNKSLTHLELAYVGIGSAGAVSLAKAVKDNIHLRKLNLSENQIGD 739

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           DGA A ++ +K +  +  L L +        E    +   NNT+
Sbjct: 740 DGALAFADAIKSNQFLYVLDLSYNNFTYRVKEVFEKIQEQNNTL 783



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 173/377 (45%), Gaps = 29/377 (7%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +  +  + +   L  N  +  +   + +L DE    I + L  N+ +++L+   N +   
Sbjct: 376 VSPDNFEAIGHALRTNHSITHISFRNNNLDDEFVVDIIQALHENNTIQILDFRLNKLGNQ 435

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
              SLA ALL+N ++  + L  N  G  G  A+A  L  N++LR+L+L  N I  +    
Sbjct: 436 TAISLAGALLKNRSLTCVDLFYNAIGPEGGVAIANSLRTNRTLRKLYLGWNHINGQTASI 495

Query: 350 LMSGL-------------------SSRKGKLAV------LDIGNNSISAKGAFHVAEYIK 384
           L   L                   S     LAV      L++ +  +    A  +    K
Sbjct: 496 LSESLKVNNVIESIYLDRIDDHSGSLLAESLAVNTSVTELNLADCQLKQFTAKALGSAFK 555

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             KSL  +N   N +G +  + I+ +L  N T+T I+L  N I+ +    +A  LK N  
Sbjct: 556 VNKSLADLNFRCNQLGAD-LKDISQSLSVNHTLTRINLSDNRINDESGRLLAESLKTNHS 614

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           ITSL L+ N +G   A  +   L  +  +  L L   QI  +GA+ +A+ L  N+T+ +L
Sbjct: 615 ITSLSLSLNQLGNKFADEMGVALLENTTLKLLDLSNNQIEFTGAQHIANALASNSTLKLL 674

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           +L  N L  +    +A S    N++LT ++LA+  I   GA ++A+A+K N  + +  LN
Sbjct: 675 NLCQNSLSSKFGPLIAYSL-TQNKSLTHLELAYVGIGSAGAVSLAKAVKDN--IHLRKLN 731

Query: 565 LANNFLTKFGQSALTDA 581
           L+ N +   G  A  DA
Sbjct: 732 LSENQIGDDGALAFADA 748


>gi|56118314|ref|NP_001007815.1| NACHT, LRR and PYD domains-containing protein 5 [Bos taurus]
 gi|75071173|sp|Q647I9.1|NALP5_BOVIN RecName: Full=NACHT, LRR and PYD domains-containing protein 5;
            AltName: Full=Mater protein homolog
 gi|51980125|gb|AAU20764.1| maternal antigen that embryo require [Bos taurus]
          Length = 1098

 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 4/348 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R  + +D++G    +E +    E+L + Q A E +     G+T A  +    VL ++ +L
Sbjct: 736  RNITRLDLTGCRLREEDVQTACEALRHPQCALESLRLDRCGLTPASCREISQVLATSGSL 795

Query: 221  KTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            K+L+L+GN + D+GVK LCD L V    +++L L S  L     + +A  L  N  L  L
Sbjct: 796  KSLSLTGNKVADQGVKSLCDALKVTPCTLQKLILGSCGLTAATCQDLASALIENQGLTHL 855

Query: 280  ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
             L+ + +   G + L  A+ L +  ++ L LN       G   LA  L GN+ L  L L 
Sbjct: 856  SLSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFLAFALMGNRHLTHLSLS 915

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N + D G+  L   +      L  LD+ N  ++A     ++  I     L  ++L  N 
Sbjct: 916  MNPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNVITRSPRLRSLDLAANA 975

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            +GDEG   + + LKQ  T+T + L    + S+G  A++  L  +  + SL+L  N +G  
Sbjct: 976  LGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSRHLASLNLMRNDLGPR 1035

Query: 459  GAKAL-SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            G   L S  +    N+ T+ L   Q  A     +  + R    + I D
Sbjct: 1036 GMTTLCSAFMHPTSNLQTIGLWKEQYPARVRRLLEQVQRLKPHVVISD 1083



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 180/404 (44%), Gaps = 18/404 (4%)

Query: 189  NQTAEEVSFAANGITAAGIKAFD-------GVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            ++ AE  S A  G+    IK  D        VL ++  L+ L+LSG+ +  E +K LC  
Sbjct: 647  DEFAEAWSGAPQGLK---IKTLDEHWEDLCSVLSTHPNLRQLDLSGSVLSKEAMKTLCVK 703

Query: 242  LVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L   A  ++ L      +          L+ N +I R L+L    +      +  EAL  
Sbjct: 704  LRQPACKIQNLIFKGARVTPGLRHLWMTLIINRNITR-LDLTGCRLREEDVQTACEALRH 762

Query: 301  -NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
                + SL L+           +++ L  + SL+ L L GN + D+G+++L   L     
Sbjct: 763  PQCALESLRLDRCGLTPASCREISQVLATSGSLKSLSLTGNKVADQGVKSLCDALKVTPC 822

Query: 360  KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-IT 418
             L  L +G+  ++A     +A  +   + L  ++L  +++G +G   +  A+K +   + 
Sbjct: 823  TLQKLILGSCGLTAATCQDLASALIENQGLTHLSLSGDELGSKGMSLLCRAVKLSSCGLQ 882

Query: 419  TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV-LKFHGNINTLK 477
             + L   ++   G   +A  L  N  +T L L+ NP+   G   L EV ++    +  L 
Sbjct: 883  KLALNACSLDVAGCGFLAFALMGNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLRDLD 942

Query: 478  LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
            L  C++ AS  + +++++  +  +  LDL AN L DEG   L +  K  N  LT + L  
Sbjct: 943  LVNCRLTASCCKSLSNVITRSPRLRSLDLAANALGDEGIAALCEGLKQKN-TLTRLGLEA 1001

Query: 538  NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
              +  +G  A++ AL  +  +A  SLNL  N L   G + L  A
Sbjct: 1002 CGLTSEGCKALSAALTCSRHLA--SLNLMRNDLGPRGMTTLCSA 1043



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 172/397 (43%), Gaps = 16/397 (4%)

Query: 152  QTLNEFAKELRAFSS-------VDMSGRNFGDEGLFFLAESLGYNQTAEEVS---FAANG 201
            +TL+E  ++L +  S       +D+SG     E +  L   L   Q A ++    F    
Sbjct: 663  KTLDEHWEDLCSVLSTHPNLRQLDLSGSVLSKEAMKTLCVKL--RQPACKIQNLIFKGAR 720

Query: 202  ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRD 260
            +T  G++     L  N  +  L+L+G  + +E V+  C+ L      +E L+L    L  
Sbjct: 721  VTP-GLRHLWMTLIINRNITRLDLTGCRLREEDVQTACEALRHPQCALESLRLDRCGLTP 779

Query: 261  EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGA 319
               + I+++L  +  L+ L L  N +   G  SL +AL +   T++ L L      A   
Sbjct: 780  ASCREISQVLATSGSLKSLSLTGNKVADQGVKSLCDALKVTPCTLQKLILGSCGLTAATC 839

Query: 320  NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
              LA  L  N+ L  L L G+ +G +G+  L   +      L  L +   S+   G   +
Sbjct: 840  QDLASALIENQGLTHLSLSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFL 899

Query: 380  AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARV 438
            A  +   + L  ++L MN + D G   + + + +    +  +DL    + +    +++ V
Sbjct: 900  AFALMGNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNV 959

Query: 439  LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            +  +  + SLDLA N +G +G  AL E LK    +  L L  C + + G + ++  L  +
Sbjct: 960  ITRSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCS 1019

Query: 499  NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
              ++ L+L  N L   G   L  +F      L +I L
Sbjct: 1020 RHLASLNLMRNDLGPRGMTTLCSAFMHPTSNLQTIGL 1056


>gi|334310551|ref|XP_001374437.2| PREDICTED: uncharacterized protein C14orf166B-like [Monodelphis
           domestica]
          Length = 496

 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 138/267 (51%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++  L L  N I ++G  +LM  L      +  L++
Sbjct: 126 MNLNHHGLGPKGTKAIAVALVSNTTITRLELEDNWILEDGALSLMQMLHENY-YIQELNV 184

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
             N + +KGA  + +++    S LW I L  ND  D+ A    +AL  N  I  +DL  N
Sbjct: 185 SGNHLDSKGAKIITDFLTENTSSLWSIQLAGNDFKDDTAPMFCNALTANYRIKVLDLSHN 244

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               KG   + ++L  N  + +LDL++N +   GA ALS  L+ +  + TL L W   G 
Sbjct: 245 FFSEKGGEQLGQMLAFNEGLQTLDLSWNQLHLKGAVALSNSLRVNITLKTLNLSWNGFGN 304

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA+ + D L+ N T++ LD+ +N + ++GA  L +  + +NE L  + ++ N +  DG 
Sbjct: 305 EGAQALGDALKINATLAYLDISSNHIYNDGAIKLGKGLE-INETLRILKMSQNPVTMDGV 363

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
            A+  ++K N    +  ++++N  +T+
Sbjct: 364 LAMVMSVKRNPKSRLEEMDVSNVLVTE 390



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 129/248 (52%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G +G K +   LV N  + RL+L    + ++GA ++ ++L  N  +
Sbjct: 120 NMEETYMNLNHHGLGPKGTKAIAVALVSNTTITRLELEDNWILEDGALSLMQMLHENYYI 179

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L ++ N +D  G   + + L EN S++ S+ L GN      A      L  N  ++ L
Sbjct: 180 QELNVSGNHLDSKGAKIITDFLTENTSSLWSIQLAGNDFKDDTAPMFCNALTANYRIKVL 239

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   ++G   L   L+  +G L  LD+  N +  KGA  ++  ++   +L  +NL 
Sbjct: 240 DLSHNFFSEKGGEQLGQMLAFNEG-LQTLDLSWNQLHLKGAVALSNSLRVNITLKTLNLS 298

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N  G+EGA+ + DALK N T+  +D+  N+I++ GA  + + L+ N  +  L ++ NP+
Sbjct: 299 WNGFGNEGAQALGDALKINATLAYLDISSNHIYNDGAIKLGKGLEINETLRILKMSQNPV 358

Query: 456 GADGAKAL 463
             DG  A+
Sbjct: 359 TMDGVLAM 366



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 18/329 (5%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + ++++    G +G   +A +L  N T   +    N I   G  +   +L  N  ++ LN
Sbjct: 124 TYMNLNHHGLGPKGTKAIAVALVSNTTITRLELEDNWILEDGALSLMQMLHENYYIQELN 183

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +SGN +  +G K + D L +N + +  +QL+  D +D+ A      L  N  ++VL+L++
Sbjct: 184 VSGNHLDSKGAKIITDFLTENTSSLWSIQLAGNDFKDDTAPMFCNALTANYRIKVLDLSH 243

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  +++L L+ N     GA AL+  L  N +L+ L+L  N  G
Sbjct: 244 NFFSEKGGEQLGQMLAFNEGLQTLDLSWNQLHLKGAVALSNSLRVNITLKTLNLSWNGFG 303

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG +AL   L      LA LDI +N I   GA  + + ++  ++L  + +  N +  +G
Sbjct: 304 NEGAQALGDALKIN-ATLAYLDISSNHIYNDGAIKLGKGLEINETLRILKMSQNPVTMDG 362

Query: 404 AEKIADALKQNRTITTIDLGGNN----------------IHSKGASAIARVLKDNSVITS 447
              +  ++K+N      ++  +N                +H +       V+   S   S
Sbjct: 363 VLAMVMSVKRNPKSRLEEMDVSNVLVTEGFVKQLEGVFVVHPELDVLYGEVVGTISKTVS 422

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTL 476
           L +A+N I A   K  + +L+F  +IN L
Sbjct: 423 LPVAFNVIKAYVEKNKTNMLEFFKSINHL 451



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 61/262 (23%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL------------ 422
           G   V+ +I+N +   ++NL  + +G +G + IA AL  N TIT ++L            
Sbjct: 110 GVIPVSYFIRNMEET-YMNLNHHGLGPKGTKAIAVALVSNTTITRLELEDNWILEDGALS 168

Query: 423 ----------------GGNNIHSKGASAIARVLKDNSV---------------------- 444
                            GN++ SKGA  I   L +N+                       
Sbjct: 169 LMQMLHENYYIQELNVSGNHLDSKGAKIITDFLTENTSSLWSIQLAGNDFKDDTAPMFCN 228

Query: 445 -------ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
                  I  LDL++N     G + L ++L F+  + TL L W Q+   GA  +++ LR 
Sbjct: 229 ALTANYRIKVLDLSHNFFSEKGGEQLGQMLAFNEGLQTLDLSWNQLHLKGAVALSNSLRV 288

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
           N T+  L+L  NG  +EGA+ L  + K +N  L  +D++ N I +DGA  + + L+ NE 
Sbjct: 289 NITLKTLNLSWNGFGNEGAQALGDALK-INATLAYLDISSNHIYNDGAIKLGKGLEINET 347

Query: 558 VAVTSLNLANNFLTKFGQSALT 579
           + +  L ++ N +T  G  A+ 
Sbjct: 348 LRI--LKMSQNPVTMDGVLAMV 367



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 2/218 (0%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
           +L +   E      +++SG +   +G   + + L  N ++   +  A N         F 
Sbjct: 168 SLMQMLHENYYIQELNVSGNHLDSKGAKIITDFLTENTSSLWSIQLAGNDFKDDTAPMFC 227

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L +N  +K L+LS N   ++G + L  +L  N G++ L LS   L  +GA A++  L+
Sbjct: 228 NALTANYRIKVLDLSHNFFSEKGGEQLGQMLAFNEGLQTLDLSWNQLHLKGAVALSNSLR 287

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L+ L L+ N     G  +L +AL  N+T+  L ++ N+    GA  L KGLE N++
Sbjct: 288 VNITLKTLNLSWNGFGNEGAQALGDALKINATLAYLDISSNHIYNDGAIKLGKGLEINET 347

Query: 332 LRELHLHGNSIGDEGIRAL-MSGLSSRKGKLAVLDIGN 368
           LR L +  N +  +G+ A+ MS   + K +L  +D+ N
Sbjct: 348 LRILKMSQNPVTMDGVLAMVMSVKRNPKSRLEEMDVSN 385


>gi|440909575|gb|ELR59470.1| NACHT, LRR and PYD domains-containing protein 5, partial [Bos
            grunniens mutus]
          Length = 1162

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 160/347 (46%), Gaps = 5/347 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R  + +D++G    +E +    E+L + Q A E+     G+T A  +    VL ++ +LK
Sbjct: 803  RNITRLDLTGCRLREEDVRTACEALRHPQCALELDRC--GLTPASCREISQVLATSGSLK 860

Query: 222  TLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            +L+L+GN + D+GVK LCD L V    +++L L S  L     + +A  L  N  L  L 
Sbjct: 861  SLSLTGNKVADQGVKSLCDALKVTPCTLQKLILGSCGLTAATCQDLASALIENQGLTHLS 920

Query: 281  LNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L+ + +   G + L  A+ L +  ++ L LN       G   LA  L GN+ L  L L  
Sbjct: 921  LSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFLAFALMGNRHLTHLSLSM 980

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N + D G+  L   +      L  LD+ N  ++A     ++  I     L  ++L  N +
Sbjct: 981  NPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNVITRSPRLRSLDLAANAL 1040

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            GDEG   + + LKQ  T+T + L    + S+G  A++  L  +  + SL+L  N +G  G
Sbjct: 1041 GDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSRHLASLNLMRNDLGPRG 1100

Query: 460  AKAL-SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
               L S  +    N+ T+ L   Q  A     +  + R    + I D
Sbjct: 1101 MTTLCSAFMHPTSNLQTIGLWKEQYPARVRRLLEQVQRLKPHVVISD 1147



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 101/430 (23%), Positives = 179/430 (41%), Gaps = 73/430 (16%)

Query: 189  NQTAEEVSFAANGITAAGIKAFD-------GVLQSNIALKTLNLSGNPIGDEGVKCLC-- 239
            ++ AE  S A  G+    IK  D        VL ++  L+ L+LSG+ +  E +K LC  
Sbjct: 714  DEFAEAWSGAPQGLK---IKTLDEHWEDLCSVLSTHPNLRQLDLSGSVLSKEAMKTLCVK 770

Query: 240  --------------------------DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
                                        L+ N  + RL L+   LR+E  +   E L++ 
Sbjct: 771  LRQPACKIQNLIFKGARVTPGLRHLWMTLIINRNITRLDLTGCRLREEDVRTACEALRHP 830

Query: 274  SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
                 LEL+   +  +    +++ L  + +++SL L                        
Sbjct: 831  QC--ALELDRCGLTPASCREISQVLATSGSLKSLSLT----------------------- 865

Query: 334  ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
                 GN + D+G+++L   L      L  L +G+  ++A     +A  +   + L  ++
Sbjct: 866  -----GNKVADQGVKSLCDALKVTPCTLQKLILGSCGLTAATCQDLASALIENQGLTHLS 920

Query: 394  LYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L  +++G +G   +  A+K +   +  + L   ++   G   +A  L  N  +T L L+ 
Sbjct: 921  LSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFLAFALMGNRHLTHLSLSM 980

Query: 453  NPIGADGAKALSEV-LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            NP+   G   L EV ++    +  L L  C++ AS  + +++++  +  +  LDL AN L
Sbjct: 981  NPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNVITRSPRLRSLDLAANAL 1040

Query: 512  RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
             DEG   L +  K  N  LT + L    +  +G  A++ AL  +  +A  SLNL  N L 
Sbjct: 1041 GDEGIAALCEGLKQKN-TLTRLGLEACGLTSEGCKALSAALTCSRHLA--SLNLMRNDLG 1097

Query: 572  KFGQSALTDA 581
              G + L  A
Sbjct: 1098 PRGMTTLCSA 1107



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 170/396 (42%), Gaps = 17/396 (4%)

Query: 152  QTLNEFAKELRAFSS-------VDMSGRNFGDEGLFFLAESLGYNQTAEEVS---FAANG 201
            +TL+E  ++L +  S       +D+SG     E +  L   L   Q A ++    F    
Sbjct: 730  KTLDEHWEDLCSVLSTHPNLRQLDLSGSVLSKEAMKTLCVKL--RQPACKIQNLIFKGAR 787

Query: 202  ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
            +T  G++     L  N  +  L+L+G  + +E V+  C+ L        L+L    L   
Sbjct: 788  VTP-GLRHLWMTLIINRNITRLDLTGCRLREEDVRTACEALRHPQCA--LELDRCGLTPA 844

Query: 262  GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGAN 320
              + I+++L  +  L+ L L  N +   G  SL +AL +   T++ L L      A    
Sbjct: 845  SCREISQVLATSGSLKSLSLTGNKVADQGVKSLCDALKVTPCTLQKLILGSCGLTAATCQ 904

Query: 321  ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
             LA  L  N+ L  L L G+ +G +G+  L   +      L  L +   S+   G   +A
Sbjct: 905  DLASALIENQGLTHLSLSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFLA 964

Query: 381  EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVL 439
              +   + L  ++L MN + D G   + + + +    +  +DL    + +    +++ V+
Sbjct: 965  FALMGNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNVI 1024

Query: 440  KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
              +  + SLDLA N +G +G  AL E LK    +  L L  C + + G + ++  L  + 
Sbjct: 1025 TRSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSR 1084

Query: 500  TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
             ++ L+L  N L   G   L  +F      L +I L
Sbjct: 1085 HLASLNLMRNDLGPRGMTTLCSAFMHPTSNLQTIGL 1120


>gi|320170600|gb|EFW47499.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 397

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 109/189 (57%), Gaps = 3/189 (1%)

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           +  +GD GA+ IA+ALK N T+T I L  N I   GA AIA  LK N  +T L L  N I
Sbjct: 19  LRQMGDVGAQAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQI 78

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G  GA+A++E LK +  +  L L   QIG +G   +A+ L+ N T+S L L  N + D G
Sbjct: 79  GVAGAQAIAEALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAG 138

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
           A+ +A++ K VN  LT +DL  N+I D GA AIA+ALK N  +   SL    N +   G 
Sbjct: 139 AQAIAEALK-VNMTLTHLDLHRNQIGDAGAQAIAEALKVNTTLTYVSLRF--NCIGNAGL 195

Query: 576 SALTDAKDL 584
            A+ +A+ +
Sbjct: 196 QAIGEARQV 204



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/181 (41%), Positives = 109/181 (60%), Gaps = 1/181 (0%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K   ++  I L+ N IGD GA+ IA+ALK N+T+T + L  N I   GA A
Sbjct: 26  GAQAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQIGVAGAQA 85

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N+ +  L LA N IG  G  A++E LK +  ++ L L   QIG +GA+ +A+ 
Sbjct: 86  IAEALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGAQAIAEA 145

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L+ N T++ LDL  N + D GA+ +A++ K VN  LT + L FN I + G  AI +A + 
Sbjct: 146 LKVNMTLTHLDLHRNQIGDAGAQAIAEALK-VNTTLTYVSLRFNCIGNAGLQAIGEARQV 204

Query: 555 N 555
           N
Sbjct: 205 N 205



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 124/246 (50%), Gaps = 36/246 (14%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +GA A+A+ L+ N ++  ++L  N IGD G +A                         
Sbjct: 23  GDVGAQAIAEALKVNTTVTGIYLWANQIGDVGAQA------------------------- 57

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
               +AE +K  K+L  + L+ N IG  GA+ IA+ALK N T+  + L  N I   G  A
Sbjct: 58  ----IAEALKVNKTLTELYLHQNQIGVAGAQAIAEALKVNTTLKDLFLAENQIGDAGTIA 113

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N  ++ L L  N IG  GA+A++E LK +  +  L L   QIG +GA+ +A+ 
Sbjct: 114 IAEALKVNKTLSWLGLIDNQIGDAGAQAIAEALKVNMTLTHLDLHRNQIGDAGAQAIAEA 173

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS--IDLAFNEIRDDGAFAIAQAL 552
           L+ N T++ + LR N + + G + + ++ + VN  LT   ID   N +    AF++   L
Sbjct: 174 LKVNTTLTYVSLRFNCIGNAGLQAIGEA-RQVNRTLTRLIIDDQINPL----AFSLLSRL 228

Query: 553 KANEDV 558
              ED+
Sbjct: 229 ATAEDL 234



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 1/189 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +GD G + + + L  N  V  + L +  + D GA+AIAE LK N  L  L L+ N I  +
Sbjct: 22  MGDVGAQAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQIGVA 81

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++AEAL  N+T++ L L  N  G  G  A+A+ L+ NK+L  L L  N IGD G +A
Sbjct: 82  GAQAIAEALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGAQA 141

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           +   L      L  LD+  N I   GA  +AE +K   +L +++L  N IG+ G + I +
Sbjct: 142 IAEALKVNM-TLTHLDLHRNQIGDAGAQAIAEALKVNTTLTYVSLRFNCIGNAGLQAIGE 200

Query: 410 ALKQNRTIT 418
           A + NRT+T
Sbjct: 201 ARQVNRTLT 209



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 92/179 (51%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           R  GD G   +AE+L  N T   +   AN I   G +A    L+ N  L  L L  N IG
Sbjct: 20  RQMGDVGAQAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQIG 79

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
             G + + + L  N  ++ L L+   + D G  AIAE LK N  L  L L +N I  +G 
Sbjct: 80  VAGAQAIAEALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGA 139

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            ++AEAL  N T+  L L+ N  G  GA A+A+ L+ N +L  + L  N IG+ G++A+
Sbjct: 140 QAIAEALKVNMTLTHLDLHRNQIGDAGAQAIAEALKVNTTLTYVSLRFNCIGNAGLQAI 198



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + + +     GD G   +AE+L  N+T  E+    N I  AG +A  
Sbjct: 28  QAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQIGVAGAQAIA 87

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  LK L L+ N IGD G   + + L  N  +  L L    + D GA+AIAE LK
Sbjct: 88  EALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGAQAIAEALK 147

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L+ N I  +G  ++AEAL  N+T+  + L  N  G  G  A+ +  + N++
Sbjct: 148 VNMTLTHLDLHRNQIGDAGAQAIAEALKVNTTLTYVSLRFNCIGNAGLQAIGEARQVNRT 207

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSR 357
           L  L      I D+ I  L   L SR
Sbjct: 208 LTRL------IIDDQINPLAFSLLSR 227


>gi|29823176|emb|CAD15503.2| probable lrr-gala family type III effector protein (gala 5)
           [Ralstonia solanacearum GMI1000]
          Length = 538

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 209/437 (47%), Gaps = 80/437 (18%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + ++G  F D+ L  L  SL     A ++S     ITAAGI        S + L  
Sbjct: 124 ALEKLTLAG-TFTDDDLRGLPASL----KALDLSRCRGSITAAGIAHL-----SRLPLVR 173

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+    IG EG +    +L ++  +  L +S+  +  EGA+A+A     N+ L  L ++
Sbjct: 174 LNVRNKRIGAEGAR----LLANHPTLTSLNVSNGRIGPEGAQALAA----NTRLTTLNVS 225

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK--------------GLEG 328
            N I  +G    A+AL  N T+RSL ++ N  G  GA  LA               G++G
Sbjct: 226 GNRIGVAG----AKALAANQTLRSLDVSDNRIGDEGARELAACTQLTTLDANRNGIGVDG 281

Query: 329 ------NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
                 +++L  L + GN IGD G+ AL +       +L  L++ +  + A G   +A  
Sbjct: 282 ATALAASRTLTSLAIGGNEIGDAGVLALAA-----NARLTTLNVESTGVGADGVKALAAS 336

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
               K+L W+ L  NDIG+ GA     AL  + ++TT+ L  + I ++GA A+A     N
Sbjct: 337 ----KTLTWLRLDGNDIGNAGAT----ALAASTSLTTLHLEHSRIGAEGAQALAA----N 384

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM-LRYNNTI 501
           + +T+LDL YN IG  G +ALS             L W  +  +  E  + + L    T+
Sbjct: 385 TKLTTLDLGYNDIGDAGVRALSA---------NATLVWLSVRRNNLEDASAVSLAAGKTL 435

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + LD+  NG++D+GAK LA      N  LT++D++ N+I+       A A     +  + 
Sbjct: 436 TTLDISGNGIQDQGAKALA-----ANPTLTTLDVSSNDIK------NAGARALAANARLV 484

Query: 562 SLNLANNFLTKFGQSAL 578
           SL+L NN + + G  AL
Sbjct: 485 SLDLRNNRMEESGTRAL 501


>gi|239948039|ref|ZP_04699792.1| leucine-rich repeat protein [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922315|gb|EER22339.1| leucine-rich repeat protein [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 866

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 193/369 (52%), Gaps = 41/369 (11%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N IGD G   L   L   + +  L L+S D+  +G +++A  LK+  I  +L L 
Sbjct: 143 LDLSNNHIGDSGAVALASGL-KGSKIISLNLTSNDIEQKGVQSLANSLKDTEI-TILNLC 200

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  +LA +L +NS I +L L GN  G  G + LA+ L+G + L  L LH N I
Sbjct: 201 ANKIGQTGAITLANSL-KNSQITNLELGGNRIGDHGIHILAQNLKGTQ-LTYLGLHYNDI 258

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK--------------- 387
           G+EG++AL+ G+  +  K+  L + +N I  + +  +A  +K+                 
Sbjct: 259 GNEGVQALIHGI--QDTKIINLKLSSNHIWYEESETLARSLKHTHITHLSLAGSIGRGVL 316

Query: 388 ----------SLLWINLYMN-DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
                      ++ ++L  N  I  +  + +A  LK N  IT ++   N +  +GA A++
Sbjct: 317 KVISENLVGTQIINLDLSCNRSITSKDMKFLAKDLK-NTKITELNFYNNRMGEEGAIALS 375

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             LKD   IT+LDL+YN IG +G KAL+ VL    NI +L L   ++   GA+ +A +L 
Sbjct: 376 EGLKDTQ-ITNLDLSYNRIGIEGTKALANVLD-KTNIMSLNLRKSRMEDDGAKALAVVLP 433

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            N  I  L+L  + + DEG + LA+S +  N  +T+++L  N I   GA A+A+ LK   
Sbjct: 434 -NTKIKYLNLYKSLIGDEGIRALAESLE--NTQITNLNLGLNSIDQAGAMALAKGLK--- 487

Query: 557 DVAVTSLNL 565
           +  +T L+L
Sbjct: 488 NTQITHLHL 496



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 162/325 (49%), Gaps = 40/325 (12%)

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  +  L   +  + +EGA A++E LK+  I   L+L+ N I   G  +LA  +L+ + I
Sbjct: 353 NTKITELNFYNNRMGEEGAIALSEGLKDTQITN-LDLSYNRIGIEGTKALAN-VLDKTNI 410

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            SL+L  +     GA ALA  L  N  ++ L+L+ + IGDEGIRAL   L + +  +  L
Sbjct: 411 MSLNLRKSRMEDDGAKALAVVLP-NTKIKYLNLYKSLIGDEGIRALAESLENTQ--ITNL 467

Query: 365 DIGNNSISAKGAFHVAEYIKNCK-----------------------------SLLWINLY 395
           ++G NSI   GA  +A+ +KN +                              ++ ++L 
Sbjct: 468 NLGLNSIDQAGAMALAKGLKNTQITHLHLYATLRSYKKDQSTQIFVQGLRGSKVMDLDLS 527

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            NDI D     + ++LK ++ I  ++LGGN+I  KGA  +A  LKD   I  L+L+YN I
Sbjct: 528 SNDIDDIEVHTLGESLKDSKIID-LNLGGNSIKDKGAEILANCLKDTQ-IAYLNLSYNNI 585

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G++G + L+  LK    I  L L    IG  GA+ +A  L+    I+++ L +  L  +G
Sbjct: 586 GSEGIRTLAACLK-DTQIIHLVLNEKSIGKDGAQALATGLKNTQMINLI-LTSQHLGKDG 643

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEI 540
              + + F+  +  +  +D+ F  I
Sbjct: 644 MNSMIKDFQ--DSHIACLDINFEYI 666



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 139/272 (51%), Gaps = 12/272 (4%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           L+++ I SL L+       G  AL +GL+ +  +  L    NSI ++GI+A   GL   K
Sbjct: 26  LKDTHISSLILSHYRITKEGGEALVQGLK-DTQITHLKFSENSIDNDGIQAFAEGLKDTK 84

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
                ++ G ++I       + E +KN K +  ++L+   +  E    +A  LK  + I 
Sbjct: 85  ITHLNMNFGFDNI-GDAVITLVEKLKNTK-ITHLSLHAYKMKKEIMPFLAQVLKDTQ-IA 141

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +DL  N+I   GA A+A  LK + +I SL+L  N I   G ++L+  LK    I  L L
Sbjct: 142 HLDLSNNHIGDSGAVALASGLKGSKII-SLNLTSNDIEQKGVQSLANSLK-DTEITILNL 199

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
              +IG +GA  +A+ L+ N+ I+ L+L  N + D G   LAQ+ K     LT + L +N
Sbjct: 200 CANKIGQTGAITLANSLK-NSQITNLELGGNRIGDHGIHILAQNLK--GTQLTYLGLHYN 256

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           +I ++G  A+   +   +D  + +L L++N +
Sbjct: 257 DIGNEGVQALIHGI---QDTKIINLKLSSNHI 285



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 36/222 (16%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSNIA------------- 219
            GDEG+  LAESL   Q    ++   N I  AG  A   G+  + I              
Sbjct: 447 IGDEGIRALAESLENTQIT-NLNLGLNSIDQAGAMALAKGLKNTQITHLHLYATLRSYKK 505

Query: 220 ---------------LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                          +  L+LS N I D  V  L + L D+  ++ L L    ++D+GA+
Sbjct: 506 DQSTQIFVQGLRGSKVMDLDLSSNDIDDIEVHTLGESLKDSKIID-LNLGGNSIKDKGAE 564

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            +A  LK+  I   L L+ N I   G  +LA A L+++ I  L LN    G  GA ALA 
Sbjct: 565 ILANCLKDTQI-AYLNLSYNNIGSEGIRTLA-ACLKDTQIIHLVLNEKSIGKDGAQALAT 622

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           GL+ N  +  L L    +G +G+ +++     +   +A LDI
Sbjct: 623 GLK-NTQMINLILTSQHLGKDGMNSMIKDF--QDSHIACLDI 661


>gi|118366745|ref|XP_001016588.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89298355|gb|EAR96343.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 897

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 177/360 (49%), Gaps = 18/360 (5%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           + L L    +G +    + +IL ++    RL L    + ++GA  ++E+L+ NS L  L+
Sbjct: 285 RQLKLQDLSLGSKSAYLISEILKESDHFCRLYLDKNQVGNQGAYFLSEMLQVNSSLIHLD 344

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLH------LNGNYGGALGANALAKGLEGNKSLRE 334
           ++ N I   GF  L  +L+ N T+ SL       LN N  G +GA+ L K L  N S++ 
Sbjct: 345 VSGNNIGPEGFEVLFRSLIYNCTLISLDVASKDGLNRNRIGQIGADQLEKLLRFNSSIQF 404

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L+L G SI ++ ++ +M GL+  K  L ++DI  N + +  A  +   I+N        L
Sbjct: 405 LNLCGTSINNDQLKLIMKGLNDGKS-LTMIDISQNDLDSNAAEIIVSNIQNSN---ITEL 460

Query: 395 YM--NDIGDEGAEKIADALKQNR--TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           YM  N IGD G     D    ++   + T+DL  N I ++G +   + +  N  +  L L
Sbjct: 461 YMSSNQIGDVGLSYFQDVGLHSKLYPLETLDLSQNKITTRGLAGFFQSMHKNQNLHKLIL 520

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
             N         ++E L  +  I  L    C+I   G   +A  L  N  ++ L+L+ N 
Sbjct: 521 NDNNFQGIQMNKIAEFLHENTGIQHLSFERCEIQPEGVSSIAYGLEKNKNLTYLNLKENK 580

Query: 511 LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           +R++GAK LA++    +  L  +DL+  +I D+G  A+A AL  +   ++ SLNL  N L
Sbjct: 581 VRNQGAKSLAEALSHKSH-LQVLDLSLCKIEDEGGMALAAALTKS---SLYSLNLRENSL 636



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 184/415 (44%), Gaps = 48/415 (11%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           ++E  KE   F  + +     G++G +FL+E                            +
Sbjct: 302 ISEILKESDHFCRLYLDKNQVGNQGAYFLSE----------------------------M 333

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD------LRDEGAKAIA 267
           LQ N +L  L++SGN IG EG + L   L+ N  +  L ++S D      +   GA  + 
Sbjct: 334 LQVNSSLIHLDVSGNNIGPEGFEVLFRSLIYNCTLISLDVASKDGLNRNRIGQIGADQLE 393

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           +LL+ NS ++ L L    I+      + + L +  ++  + ++ N   +  A  +   ++
Sbjct: 394 KLLRFNSSIQFLNLCGTSINNDQLKLIMKGLNDGKSLTMIDISQNDLDSNAAEIIVSNIQ 453

Query: 328 GNKSLRELHLHGNSIGDEGIRALMS-GLSSRKGKLAVLDIGNNSISAKGA---FHVAEYI 383
            N ++ EL++  N IGD G+      GL S+   L  LD+  N I+ +G    F      
Sbjct: 454 -NSNITELYMSSNQIGDVGLSYFQDVGLHSKLYPLETLDLSQNKITTRGLAGFFQSMHKN 512

Query: 384 KNCKSLLWINLYMNDIGDEGAE--KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           +N   L+     +ND   +G +  KIA+ L +N  I  +      I  +G S+IA  L+ 
Sbjct: 513 QNLHKLI-----LNDNNFQGIQMNKIAEFLHENTGIQHLSFERCEIQPEGVSSIAYGLEK 567

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  +T L+L  N +   GAK+L+E L    ++  L L  C+I   G   +A  L  ++  
Sbjct: 568 NKNLTYLNLKENKVRNQGAKSLAEALSHKSHLQVLDLSLCKIEDEGGMALAAALTKSSLY 627

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           S L+LR N L D     +  S +  N  +  I++  N I       I ++L+ N+
Sbjct: 628 S-LNLRENSLHDCVGALICSSLE-KNTYIRKINVERNPINYSYQEKIKKSLQYNQ 680



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 113/226 (50%), Gaps = 11/226 (4%)

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
           +S+K +L + D+   S+ +K A+ ++E +K       + L  N +G++GA  +++ L+ N
Sbjct: 281 TSKKRQLKLQDL---SLGSKSAYLISEILKESDHFCRLYLDKNQVGNQGAYFLSEMLQVN 337

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA------YNPIGADGAKALSEVLK 468
            ++  +D+ GNNI  +G   + R L  N  + SLD+A       N IG  GA  L ++L+
Sbjct: 338 SSLIHLDVSGNNIGPEGFEVLFRSLIYNCTLISLDVASKDGLNRNRIGQIGADQLEKLLR 397

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
           F+ +I  L L    I     + +   L    +++++D+  N L    A+ +  +  + N 
Sbjct: 398 FNSSIQFLNLCGTSINNDQLKLIMKGLNDGKSLTMIDISQNDLDSNAAEIIVSN--IQNS 455

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            +T + ++ N+I D G          ++   + +L+L+ N +T  G
Sbjct: 456 NITELYMSSNQIGDVGLSYFQDVGLHSKLYPLETLDLSQNKITTRG 501



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G+  A  +SE+LK   +   L L   Q+G  GA F+++ML+ N+++  LD+  N +  E
Sbjct: 294 LGSKSAYLISEILKESDHFCRLYLDKNQVGNQGAYFLSEMLQVNSSLIHLDVSGNNIGPE 353

Query: 515 GAKCLAQSFKVVNEALTSIDLAF------NEIRDDGAFAIAQALKANEDVAVTSLNLA-- 566
           G + L +S  + N  L S+D+A       N I   GA  + + L+ N  +    LNL   
Sbjct: 354 GFEVLFRSL-IYNCTLISLDVASKDGLNRNRIGQIGADQLEKLLRFNSSIQF--LNLCGT 410

Query: 567 --NNFLTKFGQSALTDAKDLV 585
             NN   K     L D K L 
Sbjct: 411 SINNDQLKLIMKGLNDGKSLT 431


>gi|395503869|ref|XP_003756284.1| PREDICTED: uncharacterized protein C14orf166B homolog [Sarcophilus
           harrisii]
          Length = 481

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 142/268 (52%), Gaps = 5/268 (1%)

Query: 308 HLNGNYGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           H+N N+ G    G  A+A  L  N ++  L L  N I +EG+ ALM  L      +  L+
Sbjct: 101 HMNLNHHGLGPKGTKAIAIALVSNTTITRLELEDNWILEEGVLALMQMLHENY-YIQELN 159

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           + +N + + GA  + +++    S LW I L  N+  D+ AE   +AL  N  I  +DL  
Sbjct: 160 VSHNHLGSGGAKIITDFLLENTSSLWSIQLAGNNFKDDTAEMFRNALVSNYRIKELDLSH 219

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N+   KG   +  +L  N  + +L+L +N + + GA A+   L+ +  + TL L W   G
Sbjct: 220 NSFSEKGGEQLGYMLVLNEGLQTLNLGWNQLHSRGAVAVCYSLRVNVTLKTLDLSWNGFG 279

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
             GA+ + ++L+ N+T+S LD+ +N L ++GA  L+   + +NE L  + ++ N +  +G
Sbjct: 280 NEGAQVLGEVLKINSTLSYLDISSNHLNNDGANSLSNGLE-LNETLRILKMSHNPVTLEG 338

Query: 545 AFAIAQALKANEDVAVTSLNLANNFLTK 572
           A +I  ++K N    +  ++++N  +T+
Sbjct: 339 ALSIILSVKRNPKSRLEEIDISNVLVTE 366



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 135/284 (47%), Gaps = 30/284 (10%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            + N     + L+   L  +G KAIA  L +N+ +  LEL +N I   G  +L + L EN
Sbjct: 93  FIRNMEETHMNLNHHGLGPKGTKAIAIALVSNTTITRLELEDNWILEEGVLALMQMLHEN 152

Query: 302 STIRSLHLNGNYGGALGANALAKG-LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
             I+ L+++ N+ G+ GA  +    LE   SL  + L GN+  D+      + L S   +
Sbjct: 153 YYIQELNVSHNHLGSGGAKIITDFLLENTSSLWSIQLAGNNFKDDTAEMFRNALVSNY-R 211

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           +  LD+ +NS S K                            G E++   L  N  + T+
Sbjct: 212 IKELDLSHNSFSEK----------------------------GGEQLGYMLVLNEGLQTL 243

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           +LG N +HS+GA A+   L+ N  + +LDL++N  G +GA+ L EVLK +  ++ L +  
Sbjct: 244 NLGWNQLHSRGAVAVCYSLRVNVTLKTLDLSWNGFGNEGAQVLGEVLKINSTLSYLDISS 303

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
             +   GA  +++ L  N T+ IL +  N +  EGA  +  S K
Sbjct: 304 NHLNNDGANSLSNGLELNETLRILKMSHNPVTLEGALSIILSVK 347



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 135/248 (54%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G +G K +   LV N  + RL+L    + +EG  A+ ++L  N  +
Sbjct: 96  NMEETHMNLNHHGLGPKGTKAIAIALVSNTTITRLELEDNWILEEGVLALMQMLHENYYI 155

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L +++N +   G   + + LLEN S++ S+ L GN      A      L  N  ++EL
Sbjct: 156 QELNVSHNHLGSGGAKIITDFLLENTSSLWSIQLAGNNFKDDTAEMFRNALVSNYRIKEL 215

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  NS  ++G   L   L   +G L  L++G N + ++GA  V   ++   +L  ++L 
Sbjct: 216 DLSHNSFSEKGGEQLGYMLVLNEG-LQTLNLGWNQLHSRGAVAVCYSLRVNVTLKTLDLS 274

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N  G+EGA+ + + LK N T++ +D+  N++++ GA++++  L+ N  +  L +++NP+
Sbjct: 275 WNGFGNEGAQVLGEVLKINSTLSYLDISSNHLNNDGANSLSNGLELNETLRILKMSHNPV 334

Query: 456 GADGAKAL 463
             +GA ++
Sbjct: 335 TLEGALSI 342



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 144/315 (45%), Gaps = 32/315 (10%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + ++++    G +G   +A +L  N T   +    N I   G+ A   +L  N  ++ LN
Sbjct: 100 THMNLNHHGLGPKGTKAIAIALVSNTTITRLELEDNWILEEGVLALMQMLHENYYIQELN 159

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G  G K + D L++N + +  +QL+  + +D+ A+     L +N  ++ L+L++
Sbjct: 160 VSHNHLGSGGAKIITDFLLENTSSLWSIQLAGNNFKDDTAEMFRNALVSNYRIKELDLSH 219

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L   L+ N  +++L+L  N   + GA A+   L  N +L+ L L  N  G
Sbjct: 220 NSFSEKGGEQLGYMLVLNEGLQTLNLGWNQLHSRGAVAVCYSLRVNVTLKTLDLSWNGFG 279

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG + L                              E +K   +L ++++  N + ++G
Sbjct: 280 NEGAQVL-----------------------------GEVLKINSTLSYLDISSNHLNNDG 310

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLAYNPIGADGAK 461
           A  +++ L+ N T+  + +  N +  +GA +I   +K N  S +  +D++   +     K
Sbjct: 311 ANSLSNGLELNETLRILKMSHNPVTLEGALSIILSVKRNPKSRLEEIDISNVLVTEGFVK 370

Query: 462 ALSEVLKFHGNINTL 476
            L+ V   H  ++ L
Sbjct: 371 QLNGVFSVHPELDVL 385


>gi|440795520|gb|ELR16640.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 635

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 167/348 (47%), Gaps = 27/348 (7%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDN-----------AGVERLQLSSVDLRDEGAKAIA 267
           A+  ++L    +G EG + L D L              A    + L + ++  EGA AIA
Sbjct: 44  AVNKIDLCKQFLGPEGAQTLADALTRASLHGDAPPTPLASARSVLLGADEIGPEGAMAIA 103

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
            +L +N  LR + L  N I   G  +LA++L EN T+ +L L  N  G  GA +LA+ L 
Sbjct: 104 AMLHHNKTLRTVFLGCNDIGPKGAAALADSLKENKTVEALWLKRNSIGPEGAKSLARVLA 163

Query: 328 GNKSLRELHLHG-NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           G+     L     N IG EG + L   L   + +L VL +G N++   G+  +A  +++ 
Sbjct: 164 GDNDALLLLDLVFNKIGPEGGQHLARLLEDERCRLEVLFLGGNALGPAGSARLAHSLEHN 223

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL--KDNSV 444
           + L  + L +ND+GDEGA   A  L  N T+  + L  N+I   GA+A+A  L    NS 
Sbjct: 224 RVLQELYLDVNDMGDEGAAAFARVLATNSTLRALTLASNDIGDDGAAALAEALISNPNSA 283

Query: 445 ITSLDLAY-----------NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           +  L+L Y           N IG  G  AL+ +L  +  +  L L   Q+   GA  +  
Sbjct: 284 LQMLNLGYQKSTVVMGGRPNRIGDAGVAALARMLATNRTLVALNLNKNQVTRVGARALGR 343

Query: 494 MLRYNNTISILDLRAN-GLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            L  N ++ +L+LRAN  L D+G   L  +    N+ L ++DL   ++
Sbjct: 344 ALASNRSLRVLELRANYQLGDDGVVDLLDAM-ATNDTLAALDLVGCQV 390



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 169/380 (44%), Gaps = 30/380 (7%)

Query: 136 TNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQ----- 190
           T  L     KL  +  Q   E  ++  A + +D+  +  G EG   LA++L         
Sbjct: 17  TYTLDDTLAKLKLQHHQEAGEGKRQAEAVNKIDLCKQFLGPEGAQTLADALTRASLHGDA 76

Query: 191 ------TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
                 +A  V   A+ I   G  A   +L  N  L+T+ L  N IG +G   L D L +
Sbjct: 77  PPTPLASARSVLLGADEIGPEGAMAIAAMLHHNKTLRTVFLGCNDIGPKGAAALADSLKE 136

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN-NMIDYSGFTSLAEALLENST 303
           N  VE L L    +  EGAK++A +L  ++   +L     N I   G   LA  LLE+  
Sbjct: 137 NKTVEALWLKRNSIGPEGAKSLARVLAGDNDALLLLDLVFNKIGPEGGQHLAR-LLEDER 195

Query: 304 IR--SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            R   L L GN  G  G+  LA  LE N+ L+EL+L  N +GDEG  A    L++    L
Sbjct: 196 CRLEVLFLGGNALGPAGSARLAHSLEHNRVLQELYLDVNDMGDEGAAAFARVLAT-NSTL 254

Query: 362 AVLDIGNNSISAKGAFHVAE-YIKNCKSLL-WINL-----------YMNDIGDEGAEKIA 408
             L + +N I   GA  +AE  I N  S L  +NL             N IGD G   +A
Sbjct: 255 RALTLASNDIGDDGAAALAEALISNPNSALQMLNLGYQKSTVVMGGRPNRIGDAGVAALA 314

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN-PIGADGAKALSEVL 467
             L  NRT+  ++L  N +   GA A+ R L  N  +  L+L  N  +G DG   L + +
Sbjct: 315 RMLATNRTLVALNLNKNQVTRVGARALGRALASNRSLRVLELRANYQLGDDGVVDLLDAM 374

Query: 468 KFHGNINTLKLGWCQIGASG 487
             +  +  L L  CQ+G  G
Sbjct: 375 ATNDTLAALDLVGCQVGLVG 394



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 118/202 (58%), Gaps = 3/202 (1%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +G + I  +GA  +A  + + K+L  + L  NDIG +GA  +AD+LK+N+T+  + L  N
Sbjct: 89  LGADEIGPEGAMAIAAMLHHNKTLRTVFLGCNDIGPKGAAALADSLKENKTVEALWLKRN 148

Query: 426 NIHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQI 483
           +I  +GA ++ARVL  DN  +  LDL +N IG +G + L+ +L+     +  L LG   +
Sbjct: 149 SIGPEGAKSLARVLAGDNDALLLLDLVFNKIGPEGGQHLARLLEDERCRLEVLFLGGNAL 208

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G +G+  +A  L +N  +  L L  N + DEGA   A+     N  L ++ LA N+I DD
Sbjct: 209 GPAGSARLAHSLEHNRVLQELYLDVNDMGDEGAAAFARVL-ATNSTLRALTLASNDIGDD 267

Query: 544 GAFAIAQALKANEDVAVTSLNL 565
           GA A+A+AL +N + A+  LNL
Sbjct: 268 GAAALAEALISNPNSALQMLNL 289



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 16/236 (6%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            G EG   LA  L   +   EV F   N +  AG       L+ N  L+ L L  N +GD
Sbjct: 179 IGPEGGQHLARLLEDERCRLEVLFLGGNALGPAGSARLAHSLEHNRVLQELYLDVNDMGD 238

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL--KNNSILRVLEL--------- 281
           EG      +L  N+ +  L L+S D+ D+GA A+AE L    NS L++L L         
Sbjct: 239 EGAAAFARVLATNSTLRALTLASNDIGDDGAAALAEALISNPNSALQMLNLGYQKSTVVM 298

Query: 282 --NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
               N I  +G  +LA  L  N T+ +L+LN N    +GA AL + L  N+SLR L L  
Sbjct: 299 GGRPNRIGDAGVAALARMLATNRTLVALNLNKNQVTRVGARALGRALASNRSLRVLELRA 358

Query: 340 N-SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           N  +GD+G+  L+  +++    LA LD+    +   G   +  +++   SL+ ++L
Sbjct: 359 NYQLGDDGVVDLLDAMATND-TLAALDLVGCQVGLVGLRRLLRHVETHPSLISVHL 413



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 132/307 (42%), Gaps = 45/307 (14%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL------- 214
           +   +V +   + G +G   LA+SL  N+T E +    N I   G K+   VL       
Sbjct: 110 KTLRTVFLGCNDIGPKGAAALADSLKENKTVEALWLKRNSIGPEGAKSLARVLAGDNDAL 169

Query: 215 -----------------------QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
                                       L+ L L GN +G  G   L   L  N  ++ L
Sbjct: 170 LLLDLVFNKIGPEGGQHLARLLEDERCRLEVLFLGGNALGPAGSARLAHSLEHNRVLQEL 229

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN--STIRSLHL 309
            L   D+ DEGA A A +L  NS LR L L +N I   G  +LAEAL+ N  S ++ L+L
Sbjct: 230 YLDVNDMGDEGAAAFARVLATNSTLRALTLASNDIGDDGAAALAEALISNPNSALQMLNL 289

Query: 310 -----------NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
                        N  G  G  ALA+ L  N++L  L+L+ N +   G RAL   L+S +
Sbjct: 290 GYQKSTVVMGGRPNRIGDAGVAALARMLATNRTLVALNLNKNQVTRVGARALGRALASNR 349

Query: 359 GKLAVLDI-GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
             L VL++  N  +   G   + + +    +L  ++L    +G  G  ++   ++ + ++
Sbjct: 350 -SLRVLELRANYQLGDDGVVDLLDAMATNDTLAALDLVGCQVGLVGLRRLLRHVETHPSL 408

Query: 418 TTIDLGG 424
            ++ LGG
Sbjct: 409 ISVHLGG 415



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 18/187 (9%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           I+L    +G EGA+ +ADAL      T   L G+   +  ASA            S+ L 
Sbjct: 48  IDLCKQFLGPEGAQTLADAL------TRASLHGDAPPTPLASA-----------RSVLLG 90

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            + IG +GA A++ +L  +  + T+ LG   IG  GA  +AD L+ N T+  L L+ N +
Sbjct: 91  ADEIGPEGAMAIAAMLHHNKTLRTVFLGCNDIGPKGAAALADSLKENKTVEALWLKRNSI 150

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
             EGAK LA+     N+AL  +DL FN+I  +G   +A+ L+ +E   +  L L  N L 
Sbjct: 151 GPEGAKSLARVLAGDNDALLLLDLVFNKIGPEGGQHLARLLE-DERCRLEVLFLGGNALG 209

Query: 572 KFGQSAL 578
             G + L
Sbjct: 210 PAGSARL 216


>gi|17546520|ref|NP_519922.1| GALA protein 3 [Ralstonia solanacearum GMI1000]
          Length = 522

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 209/437 (47%), Gaps = 80/437 (18%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + ++G  F D+ L  L  SL     A ++S     ITAAGI        S + L  
Sbjct: 108 ALEKLTLAG-TFTDDDLRGLPASL----KALDLSRCRGSITAAGIAHL-----SRLPLVR 157

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+    IG EG +    +L ++  +  L +S+  +  EGA+A+A     N+ L  L ++
Sbjct: 158 LNVRNKRIGAEGAR----LLANHPTLTSLNVSNGRIGPEGAQALAA----NTRLTTLNVS 209

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK--------------GLEG 328
            N I  +G    A+AL  N T+RSL ++ N  G  GA  LA               G++G
Sbjct: 210 GNRIGVAG----AKALAANQTLRSLDVSDNRIGDEGARELAACTQLTTLDANRNGIGVDG 265

Query: 329 ------NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
                 +++L  L + GN IGD G+ AL +       +L  L++ +  + A G   +A  
Sbjct: 266 ATALAASRTLTSLAIGGNEIGDAGVLALAA-----NARLTTLNVESTGVGADGVKALAAS 320

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
               K+L W+ L  NDIG+ GA     AL  + ++TT+ L  + I ++GA A+A     N
Sbjct: 321 ----KTLTWLRLDGNDIGNAGAT----ALAASTSLTTLHLEHSRIGAEGAQALAA----N 368

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM-LRYNNTI 501
           + +T+LDL YN IG  G +ALS             L W  +  +  E  + + L    T+
Sbjct: 369 TKLTTLDLGYNDIGDAGVRALSA---------NATLVWLSVRRNNLEDASAVSLAAGKTL 419

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + LD+  NG++D+GAK LA      N  LT++D++ N+I+       A A     +  + 
Sbjct: 420 TTLDISGNGIQDQGAKALA-----ANPTLTTLDVSSNDIK------NAGARALAANARLV 468

Query: 562 SLNLANNFLTKFGQSAL 578
           SL+L NN + + G  AL
Sbjct: 469 SLDLRNNRMEESGTRAL 485


>gi|443712324|gb|ELU05701.1| hypothetical protein CAPTEDRAFT_84230, partial [Capitella teleta]
          Length = 291

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 148/272 (54%), Gaps = 5/272 (1%)

Query: 298 LLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           LLEN + ++ L +  N+ G  G   L + LE N+ L +L +  N+IGDEG R L  GL  
Sbjct: 20  LLENYACVKELSIAKNHIGTPGVVRLGQALEKNRGLVKLDIRLNTIGDEGARHLARGLRR 79

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
               L  L++ +  ++  G   + + +   +SL+ +++  N+I +EG + IA+AL  N T
Sbjct: 80  HL-SLLSLNVTSTGLTGSGCSILMQGLGRNQSLIQLDIGFNEIDEEGCKAIAEALGSNCT 138

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  + +  N + S GA+ I R L+ NS +T LD++ N I ++    L +VL+F+  +  L
Sbjct: 139 LRKLRMRANGVRSYGATCIFRSLRKNSRLTLLDISSNRITSESVLILGDVLRFNRTLREL 198

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L  C++ + G   ++  L+ N T+  LDL  N + D+G + LA+  K  N+ +  + L 
Sbjct: 199 NLEKCEVSSEGCAALSRALKTNTTLKNLDLSLNPIGDDGVEALAEGLK-YNQVMDVLSLN 257

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
             +I + G   + +A++ N   A+TS+ L  N
Sbjct: 258 MCDIGNRGFLVLLEAMRFNS--AMTSVKLCYN 287



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 148/305 (48%), Gaps = 29/305 (9%)

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           I    G+L++   +K L+++ N IG  GV  L   L  N G+ +L +    + DEGA+ +
Sbjct: 14  IHTLAGLLENYACVKELSIAKNHIGTPGVVRLGQALEKNRGLVKLDIRLNTIGDEGARHL 73

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           A                      G       L  N T  S  L G+     G + L +GL
Sbjct: 74  AR---------------------GLRRHLSLLSLNVT--STGLTGS-----GCSILMQGL 105

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             N+SL +L +  N I +EG +A+   L S    L  L +  N + + GA  +   ++  
Sbjct: 106 GRNQSLIQLDIGFNEIDEEGCKAIAEALGS-NCTLRKLRMRANGVRSYGATCIFRSLRKN 164

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
             L  +++  N I  E    + D L+ NRT+  ++L    + S+G +A++R LK N+ + 
Sbjct: 165 SRLTLLDISSNRITSESVLILGDVLRFNRTLRELNLEKCEVSSEGCAALSRALKTNTTLK 224

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           +LDL+ NPIG DG +AL+E LK++  ++ L L  C IG  G   + + +R+N+ ++ + L
Sbjct: 225 NLDLSLNPIGDDGVEALAEGLKYNQVMDVLSLNMCDIGNRGFLVLLEAMRFNSAMTSVKL 284

Query: 507 RANGL 511
             N +
Sbjct: 285 CYNNI 289



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 1/292 (0%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           SV +  +   +  +  LA  L      +E+S A N I   G+      L+ N  L  L++
Sbjct: 1   SVSLYNQCLCNNRIHTLAGLLENYACVKELSIAKNHIGTPGVVRLGQALEKNRGLVKLDI 60

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             N IGDEG + L   L  +  +  L ++S  L   G   + + L  N  L  L++  N 
Sbjct: 61  RLNTIGDEGARHLARGLRRHLSLLSLNVTSTGLTGSGCSILMQGLGRNQSLIQLDIGFNE 120

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           ID  G  ++AEAL  N T+R L +  N   + GA  + + L  N  L  L +  N I  E
Sbjct: 121 IDEEGCKAIAEALGSNCTLRKLRMRANGVRSYGATCIFRSLRKNSRLTLLDISSNRITSE 180

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
            +  L   L   +  L  L++    +S++G   ++  +K   +L  ++L +N IGD+G E
Sbjct: 181 SVLILGDVLRFNR-TLRELNLEKCEVSSEGCAALSRALKTNTTLKNLDLSLNPIGDDGVE 239

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            +A+ LK N+ +  + L   +I ++G   +   ++ NS +TS+ L YN IG 
Sbjct: 240 ALAEGLKYNQVMDVLSLNMCDIGNRGFLVLLEAMRFNSAMTSVKLCYNNIGV 291



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 29/245 (11%)

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA-- 408
           ++GL      +  L I  N I   G   + + ++  + L+ +++ +N IGDEGA  +A  
Sbjct: 17  LAGLLENYACVKELSIAKNHIGTPGVVRLGQALEKNRGLVKLDIRLNTIGDEGARHLARG 76

Query: 409 --------------------------DALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                                       L +N+++  +D+G N I  +G  AIA  L  N
Sbjct: 77  LRRHLSLLSLNVTSTGLTGSGCSILMQGLGRNQSLIQLDIGFNEIDEEGCKAIAEALGSN 136

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  L +  N + + GA  +   L+ +  +  L +   +I +     + D+LR+N T+ 
Sbjct: 137 CTLRKLRMRANGVRSYGATCIFRSLRKNSRLTLLDISSNRITSESVLILGDVLRFNRTLR 196

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L+L    +  EG   L+++ K  N  L ++DL+ N I DDG  A+A+ LK N+ + V S
Sbjct: 197 ELNLEKCEVSSEGCAALSRALK-TNTTLKNLDLSLNPIGDDGVEALAEGLKYNQVMDVLS 255

Query: 563 LNLAN 567
           LN+ +
Sbjct: 256 LNMCD 260



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 29/266 (10%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R    +D+     GDEG   LA  L  + +   ++  + G+T +G       L  N +L 
Sbjct: 53  RGLVKLDIRLNTIGDEGARHLARGLRRHLSLLSLNVTSTGLTGSGCSILMQGLGRNQSLI 112

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L++  N I +EG K + + L  N  + +L++ +  +R  GA  I   L+ NS L +L++
Sbjct: 113 QLDIGFNEIDEEGCKAIAEALGSNCTLRKLRMRANGVRSYGATCIFRSLRKNSRLTLLDI 172

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++N I       L + L  N T+R L+L      + G  AL++ L+ N +L+ L L  N 
Sbjct: 173 SSNRITSESVLILGDVLRFNRTLRELNLEKCEVSSEGCAALSRALKTNTTLKNLDLSLNP 232

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD+G+ AL  GL   +    V+D+                         ++L M DIG+
Sbjct: 233 IGDDGVEALAEGLKYNQ----VMDV-------------------------LSLNMCDIGN 263

Query: 402 EGAEKIADALKQNRTITTIDLGGNNI 427
            G   + +A++ N  +T++ L  NNI
Sbjct: 264 RGFLVLLEAMRFNSAMTSVKLCYNNI 289



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 31/218 (14%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++LY   + +     +A  L+    +  + +  N+I + G   + + L+ N  +  LD+ 
Sbjct: 2   VSLYNQCLCNNRIHTLAGLLENYACVKELSIAKNHIGTPGVVRLGQALEKNRGLVKLDIR 61

Query: 452 YNPIGADGAKALS----------------------------EVLKFHGNINTLKLGWCQI 483
            N IG +GA+ L+                            + L  + ++  L +G+ +I
Sbjct: 62  LNTIGDEGARHLARGLRRHLSLLSLNVTSTGLTGSGCSILMQGLGRNQSLIQLDIGFNEI 121

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
              G + +A+ L  N T+  L +RANG+R  GA C+ +S +  N  LT +D++ N I  +
Sbjct: 122 DEEGCKAIAEALGSNCTLRKLRMRANGVRSYGATCIFRSLR-KNSRLTLLDISSNRITSE 180

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
               +   L+ N    +  LNL    ++  G +AL+ A
Sbjct: 181 SVLILGDVLRFNR--TLRELNLEKCEVSSEGCAALSRA 216


>gi|296477123|tpg|DAA19238.1| TPA: NACHT, LRR and PYD domains-containing protein 5 [Bos taurus]
          Length = 1098

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 4/348 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R  + +D++G    +E +    E+L + Q A E +     G+T A  +    VL ++ +L
Sbjct: 736  RNITRLDLTGCRLREEDVQTACEALRHPQCALESLRLDRCGLTPASCREISQVLATSGSL 795

Query: 221  KTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            K+L+L+GN + D+GVK LCD L V    +++L L S  L     + +A  L  N  L  L
Sbjct: 796  KSLSLTGNKVVDQGVKSLCDALKVTPCTLQKLILGSCGLTAATCQDLASALIENQGLTHL 855

Query: 280  ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
             L+ + +   G + L  A+ L +  ++ L LN       G   LA  L GN+ L  L L 
Sbjct: 856  SLSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFLAFALMGNRHLTHLSLS 915

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N + D G+  L   +      L  LD+ N  ++A     ++  I     L  ++L  N 
Sbjct: 916  MNPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNVITRSPRLRSLDLAANA 975

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            +GDEG   + + LKQ  T+T + L    + S+G  A++  L  +  + SL+L  N +G  
Sbjct: 976  LGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSRHLASLNLMRNDLGPR 1035

Query: 459  GAKAL-SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            G   L S  +    N+ T+ L   Q  A     +  + R    + I D
Sbjct: 1036 GMTTLCSAFMHPTSNLQTIGLWKEQYPARVRRLLEQVQRLKPHVVISD 1083



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 180/404 (44%), Gaps = 18/404 (4%)

Query: 189  NQTAEEVSFAANGITAAGIKAFD-------GVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            ++ AE  S A  G+    IK  D        VL ++  L+ L+LSG+ +  E +K LC  
Sbjct: 647  DEFAEAWSGAPQGLK---IKTLDEHWEDLCSVLSTHPNLRQLDLSGSVLSKEAMKTLCVK 703

Query: 242  LVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L   A  ++ L      +          L+ N +I R L+L    +      +  EAL  
Sbjct: 704  LRQPACKIQNLIFKGARVTPGLRHLWMTLIINRNITR-LDLTGCRLREEDVQTACEALRH 762

Query: 301  -NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
                + SL L+           +++ L  + SL+ L L GN + D+G+++L   L     
Sbjct: 763  PQCALESLRLDRCGLTPASCREISQVLATSGSLKSLSLTGNKVVDQGVKSLCDALKVTPC 822

Query: 360  KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-IT 418
             L  L +G+  ++A     +A  +   + L  ++L  +++G +G   +  A+K +   + 
Sbjct: 823  TLQKLILGSCGLTAATCQDLASALIENQGLTHLSLSGDELGSKGMSLLCRAVKLSSCGLQ 882

Query: 419  TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV-LKFHGNINTLK 477
             + L   ++   G   +A  L  N  +T L L+ NP+   G   L EV ++    +  L 
Sbjct: 883  KLALNACSLDVAGCGFLAFALMGNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLRDLD 942

Query: 478  LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
            L  C++ AS  + +++++  +  +  LDL AN L DEG   L +  K  N  LT + L  
Sbjct: 943  LVNCRLTASCCKSLSNVITRSPRLRSLDLAANALGDEGIAALCEGLKQKN-TLTRLGLEA 1001

Query: 538  NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
              +  +G  A++ AL  +  +A  SLNL  N L   G + L  A
Sbjct: 1002 CGLTSEGCKALSAALTCSRHLA--SLNLMRNDLGPRGMTTLCSA 1043



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 172/397 (43%), Gaps = 16/397 (4%)

Query: 152  QTLNEFAKELRAFSS-------VDMSGRNFGDEGLFFLAESLGYNQTAEEVS---FAANG 201
            +TL+E  ++L +  S       +D+SG     E +  L   L   Q A ++    F    
Sbjct: 663  KTLDEHWEDLCSVLSTHPNLRQLDLSGSVLSKEAMKTLCVKL--RQPACKIQNLIFKGAR 720

Query: 202  ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRD 260
            +T  G++     L  N  +  L+L+G  + +E V+  C+ L      +E L+L    L  
Sbjct: 721  VTP-GLRHLWMTLIINRNITRLDLTGCRLREEDVQTACEALRHPQCALESLRLDRCGLTP 779

Query: 261  EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGA 319
               + I+++L  +  L+ L L  N +   G  SL +AL +   T++ L L      A   
Sbjct: 780  ASCREISQVLATSGSLKSLSLTGNKVVDQGVKSLCDALKVTPCTLQKLILGSCGLTAATC 839

Query: 320  NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
              LA  L  N+ L  L L G+ +G +G+  L   +      L  L +   S+   G   +
Sbjct: 840  QDLASALIENQGLTHLSLSGDELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCGFL 899

Query: 380  AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARV 438
            A  +   + L  ++L MN + D G   + + + +    +  +DL    + +    +++ V
Sbjct: 900  AFALMGNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNV 959

Query: 439  LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            +  +  + SLDLA N +G +G  AL E LK    +  L L  C + + G + ++  L  +
Sbjct: 960  ITRSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCS 1019

Query: 499  NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
              ++ L+L  N L   G   L  +F      L +I L
Sbjct: 1020 RHLASLNLMRNDLGPRGMTTLCSAFMHPTSNLQTIGL 1056


>gi|299067411|emb|CBJ38610.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
           solanacearum CMR15]
          Length = 620

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 129/380 (33%), Positives = 180/380 (47%), Gaps = 70/380 (18%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRV 278
           L +LNL  N IGD+G   L              L+S+D    G   A AE L  N++LR 
Sbjct: 261 LTSLNLYYNEIGDDGAGALA---------ASKTLTSLDASKNGIGNAGAEALAKNTVLRE 311

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L +NMI   G  +LA     N+++  L L GN  G  GA  LA    GN+SL  L + 
Sbjct: 312 LNLAHNMIGTPGVRALAG----NTSLTELDLGGNRLGDAGALELA----GNRSLLSLKVD 363

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA--------------------FH 378
            N IG  G +AL     +R   L  LD+  N+I   GA                     H
Sbjct: 364 HNEIGGGGAQAL-----ARHATLTSLDLSYNAIGLWGAGALGANTTLSVLNLSFCGIDSH 418

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A  +   KSL  + L  N IGD GA ++A    +NRT+T +DL  N I + GA A    
Sbjct: 419 SACALACNKSLAELYLNGNWIGDYGALELA----KNRTLTLLDLSRNGIRNAGAEA---- 470

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  N  +TSL LA N I  DGA AL+     H  + TL L   +IGA GA  +A     +
Sbjct: 471 LGGNQALTSLKLAGNGIDDDGAAALAR----HPRLTTLDLSRNRIGAEGARHLAQ----S 522

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            T++ LDL  N +  +GA+ L+QS      AL +++++ N I + GA ++A      +  
Sbjct: 523 ATLAELDLSQNRIGPDGAEALSQS-----TALITLNVSHNAIGEAGARSLA------DSA 571

Query: 559 AVTSLNLANNFLTKFGQSAL 578
           ++TSL+   N + + G   L
Sbjct: 572 SLTSLDARRNGIGEDGAKVL 591



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 163/350 (46%), Gaps = 73/350 (20%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +S+D S    G+ G    AE+L  N    E++ A N I   G++A  G    N +L 
Sbjct: 283 KTLTSLDASKNGIGNAG----AEALAKNTVLRELNLAHNMIGTPGVRALAG----NTSLT 334

Query: 222 TLNLSGNPIGDEGV------KCLCDILVDN-----AGVERL----QLSSVDLRDE----- 261
            L+L GN +GD G       + L  + VD+      G + L     L+S+DL        
Sbjct: 335 ELDLGGNRLGDAGALELAGNRSLLSLKVDHNEIGGGGAQALARHATLTSLDLSYNAIGLW 394

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA-- 319
           GA A    L  N+ L VL L+   ID     +LA     N ++  L+LNGN+ G  GA  
Sbjct: 395 GAGA----LGANTTLSVLNLSFCGIDSHSACALAC----NKSLAELYLNGNWIGDYGALE 446

Query: 320 ------------------NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
                             NA A+ L GN++L  L L GN I D+G  AL     +R  +L
Sbjct: 447 LAKNRTLTLLDLSRNGIRNAGAEALGGNQALTSLKLAGNGIDDDGAAAL-----ARHPRL 501

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             LD+  N I A+GA H+A+      +L  ++L  N IG +GAE    AL Q+  + T++
Sbjct: 502 TTLDLSRNRIGAEGARHLAQ----SATLAELDLSQNRIGPDGAE----ALSQSTALITLN 553

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           +  N I   GA    R L D++ +TSLD   N IG DGAK L    +  G
Sbjct: 554 VSHNAIGEAGA----RSLADSASLTSLDARRNGIGEDGAKVLEANTRLTG 599



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 195/399 (48%), Gaps = 70/399 (17%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCL-------------CDI-------LVDNAGVERLQLSS 255
           + + LK+LNL+G  IG EG + L             C I       L  +  ++ L LS 
Sbjct: 186 AEMPLKSLNLTGIEIGVEGARTLAASTSLVSLTLIGCGIGDRAAQALAASQSIKSLDLSV 245

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  +GA+A+A      + L  L L  N I   G    A AL  + T+ SL  + N  G
Sbjct: 246 NMIGRDGAQALAA-----APLTSLNLYYNEIGDDG----AGALAASKTLTSLDASKNGIG 296

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA ALAK    N  LREL+L  N IG  G+RAL    S     L  LD+G N +   G
Sbjct: 297 NAGAEALAK----NTVLRELNLAHNMIGTPGVRALAGNTS-----LTELDLGGNRLGDAG 347

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +A      +SLL + +  N+IG  GA+    AL ++ T+T++DL  N I   GA A 
Sbjct: 348 ALELA----GNRSLLSLKVDHNEIGGGGAQ----ALARHATLTSLDLSYNAIGLWGAGA- 398

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
              L  N+ ++ L+L++  I +  A AL+     + ++  L L    IG  GA  +A   
Sbjct: 399 ---LGANTTLSVLNLSFCGIDSHSACALA----CNKSLAELYLNGNWIGDYGALELAK-- 449

Query: 496 RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             N T+++LDL  NG+R+ GA+ L       N+ALTS+ LA N I DDGA A+A+  +  
Sbjct: 450 --NRTLTLLDLSRNGIRNAGAEALGG-----NQALTSLKLAGNGIDDDGAAALARHPR-- 500

Query: 556 EDVAVTSLNLANNFLTKFGQSALTDAKDLV-YEMSEKEV 593
               +T+L+L+ N +   G   L  +  L   ++S+  +
Sbjct: 501 ----LTTLDLSRNRIGAEGARHLAQSATLAELDLSQNRI 535


>gi|290996081|ref|XP_002680611.1| predicted protein [Naegleria gruberi]
 gi|284094232|gb|EFC47867.1| predicted protein [Naegleria gruberi]
          Length = 412

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 176/322 (54%), Gaps = 44/322 (13%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L +L++S N IGDEG K + ++      +  L +S +++ DEGAK I+E+ +    L  L
Sbjct: 128 LTSLDISENQIGDEGAKYISEM----RQLTSLDISDIEIGDEGAKYISEMKQ----LTSL 179

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            ++ N I   G    A+ + E   + SLH+  N  G  GA    K +   K L  L++  
Sbjct: 180 NISYNAISDEG----AKFISEMKQLMSLHIYKNLIGDEGA----KYIREMKQLTSLNISY 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           NSI DEG + +     S   +L  LDI  N IS +GA    ++I   K L  +++  N+I
Sbjct: 232 NSISDEGAKFI-----SEMKQLTSLDIVFNEISGEGA----KFISEMKQLTSLDISDNEI 282

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIH--SKGASAIARVLKDNSVITSLDLAYNPIGA 457
           GDEG + +++ +KQ   +T++ + GN I   ++ +   A+ + +   +TSLD++YN I  
Sbjct: 283 GDEGVKYLSE-MKQ---LTSLTISGNEITYCNQISEEGAKFISEMKQLTSLDISYNLISD 338

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           +GAK +SE+      + +L + +  I   GA+F+++M +    ++ LD+ +N + DEGAK
Sbjct: 339 EGAKYISEM----KQLTSLNISYNSISGEGAKFISEMKQ----LTSLDIVSNRIGDEGAK 390

Query: 518 CLAQSFKVVNEALTSIDLAFNE 539
            +++      + LTS++++ N+
Sbjct: 391 YISEM-----KQLTSLNISDNQ 407



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 161/293 (54%), Gaps = 38/293 (12%)

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A+ + E   + SL ++ N  G  GA  +++     + L  L +    IGDEG + +    
Sbjct: 119 AKFITEMKQLTSLDISENQIGDEGAKYISEM----RQLTSLDISDIEIGDEGAKYI---- 170

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
            S   +L  L+I  N+IS +GA    ++I   K L+ +++Y N IGDEGA+ I    ++ 
Sbjct: 171 -SEMKQLTSLNISYNAISDEGA----KFISEMKQLMSLHIYKNLIGDEGAKYI----REM 221

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           + +T++++  N+I  +GA  I+ + +    +TSLD+ +N I  +GAK +SE+      + 
Sbjct: 222 KQLTSLNISYNSISDEGAKFISEMKQ----LTSLDIVFNEISGEGAKFISEM----KQLT 273

Query: 475 TLKLGWCQIGASGAEFVADMLRYNN-TISILDLR-ANGLRDEGAKCLAQSFKVVNEALTS 532
           +L +   +IG  G +++++M +  + TIS  ++   N + +EGAK +++      + LTS
Sbjct: 274 SLDISDNEIGDEGVKYLSEMKQLTSLTISGNEITYCNQISEEGAKFISEM-----KQLTS 328

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
           +D+++N I D+GA  I++  +      +TSLN++ N ++  G   +++ K L 
Sbjct: 329 LDISYNLISDEGAKYISEMKQ------LTSLNISYNSISGEGAKFISEMKQLT 375



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 177/364 (48%), Gaps = 97/364 (26%)

Query: 235 VKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           VK  C  L      E  QL+S+D+      DEGAK I+E+ +    L  L++++  I   
Sbjct: 110 VKFSCRFLEAKFITEMKQLTSLDISENQIGDEGAKYISEMRQ----LTSLDISDIEIGDE 165

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G    A+ + E   + SL+++ N     GA  +++     K L  LH++ N IGDEG   
Sbjct: 166 G----AKYISEMKQLTSLNISYNAISDEGAKFISEM----KQLMSLHIYKNLIGDEG--- 214

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
                                         A+YI+  K L  +N+  N I DEGA+ I++
Sbjct: 215 ------------------------------AKYIREMKQLTSLNISYNSISDEGAKFISE 244

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV--- 466
            +KQ   +T++D+  N I  +GA  I+ + +    +TSLD++ N IG +G K LSE+   
Sbjct: 245 -MKQ---LTSLDIVFNEISGEGAKFISEMKQ----LTSLDISDNEIGDEGVKYLSEMKQL 296

Query: 467 --LKFHGNINTLKLGWC-QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ-- 521
             L   GN    ++ +C QI   GA+F+++M +    ++ LD+  N + DEGAK +++  
Sbjct: 297 TSLTISGN----EITYCNQISEEGAKFISEMKQ----LTSLDISYNLISDEGAKYISEMK 348

Query: 522 -------SF--------KVVNE--ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
                  S+        K ++E   LTS+D+  N I D+GA  I++  +      +TSLN
Sbjct: 349 QLTSLNISYNSISGEGAKFISEMKQLTSLDIVSNRIGDEGAKYISEMKQ------LTSLN 402

Query: 565 LANN 568
           +++N
Sbjct: 403 ISDN 406



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 117/209 (55%), Gaps = 27/209 (12%)

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
           F  A++I   K L  +++  N IGDEGA+ I++     R +T++D+    I  +GA  I+
Sbjct: 116 FLEAKFITEMKQLTSLDISENQIGDEGAKYISEM----RQLTSLDISDIEIGDEGAKYIS 171

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            + +    +TSL+++YN I  +GAK +SE+      + +L +    IG  GA+++ +M +
Sbjct: 172 EMKQ----LTSLNISYNAISDEGAKFISEM----KQLMSLHIYKNLIGDEGAKYIREMKQ 223

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
               ++ L++  N + DEGAK +++      + LTS+D+ FNEI  +GA  I++  +   
Sbjct: 224 ----LTSLNISYNSISDEGAKFISEM-----KQLTSLDIVFNEISGEGAKFISEMKQ--- 271

Query: 557 DVAVTSLNLANNFLTKFGQSALTDAKDLV 585
              +TSL++++N +   G   L++ K L 
Sbjct: 272 ---LTSLDISDNEIGDEGVKYLSEMKQLT 297



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 98/178 (55%), Gaps = 34/178 (19%)

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           A+ + +   +TSLD++ N IG +GAK +SE+ +    + +L +   +IG  GA+++++M 
Sbjct: 119 AKFITEMKQLTSLDISENQIGDEGAKYISEMRQ----LTSLDISDIEIGDEGAKYISEMK 174

Query: 496 RYNNTISILDLRANGLRDEGAKCLAQSFKVVN-------------------EALTSIDLA 536
           +    ++ L++  N + DEGAK +++  ++++                   + LTS++++
Sbjct: 175 Q----LTSLNISYNAISDEGAKFISEMKQLMSLHIYKNLIGDEGAKYIREMKQLTSLNIS 230

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV-YEMSEKEV 593
           +N I D+GA  I++  +      +TSL++  N ++  G   +++ K L   ++S+ E+
Sbjct: 231 YNSISDEGAKFISEMKQ------LTSLDIVFNEISGEGAKFISEMKQLTSLDISDNEI 282



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 12/116 (10%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAES---LGYNQTAEEVSFAANGITAAGIKAFDGV 213
           F  E++  +S+D+S    GDEG+ +L+E         +  E+++  N I+  G K    +
Sbjct: 265 FISEMKQLTSLDISDNEIGDEGVKYLSEMKQLTSLTISGNEITY-CNQISEEGAKFISEM 323

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
            Q    L +L++S N I DEG K + ++      +  L +S   +  EGAK I+E+
Sbjct: 324 KQ----LTSLDISYNLISDEGAKYISEM----KQLTSLNISYNSISGEGAKFISEM 371


>gi|157823287|ref|NP_001102706.1| nucleotide-binding oligomerization domain-containing protein 1
           [Rattus norvegicus]
 gi|149033305|gb|EDL88106.1| similar to Caspase recruitment domain protein 4 (predicted) [Rattus
           norvegicus]
          Length = 953

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 117/219 (53%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   + E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVIRLSVNQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + R +T + LG N I S+G   +A+ +K+++ I  + +  N IG +GAKA +E
Sbjct: 775 YVAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++ TL L +  I   G + +A  L+ N T++I+ L  N L DE A+C A+  + 
Sbjct: 835 ALRDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLR- 893

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           VN+ L  + L  N I  +G   +A+AL+ N  +    LN
Sbjct: 894 VNQTLKHLWLIQNHITAEGTAQLARALQKNTTITEICLN 932



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 119/225 (52%), Gaps = 1/225 (0%)

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S +  + L+ N    +G   L + L   K +  L L+ N I D G R +   L   +G L
Sbjct: 728 SRLTVIRLSVNQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRG-L 786

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +G N I+++G   VA+ +KN  S++ + ++ N IGDEGA+  A+AL+ + ++TT+ 
Sbjct: 787 THLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLS 846

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I  +G  ++A+ LK N+ +T + L  N +  + A+  +E+L+ +  +  L L   
Sbjct: 847 LAFNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLRVNQTLKHLWLIQN 906

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
            I A G   +A  L+ N TI+ + L  N ++ E AK      +++
Sbjct: 907 HITAEGTAQLARALQKNTTITEICLNGNLIKPEEAKVFENEKRII 951



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 115/244 (47%), Gaps = 29/244 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK LC+ L     V  L L +  + D GA+ +A++L     L  L
Sbjct: 730 LTVIRLSVNQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G   +A+A+  +++I  + + GN  G  GA A A+ L  + SL  L L  
Sbjct: 790 KLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAF 849

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  EG ++L                             A+ +K   +L  I L  N++
Sbjct: 850 NGISPEGGKSL-----------------------------AQALKQNTTLTIIWLTKNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE  A+ L+ N+T+  + L  N+I ++G + +AR L+ N+ IT + L  N I  + 
Sbjct: 881 NDEAAECFAEMLRVNQTLKHLWLIQNHITAEGTAQLARALQKNTTITEICLNGNLIKPEE 940

Query: 460 AKAL 463
           AK  
Sbjct: 941 AKVF 944



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 87/170 (51%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A+ L   +    +    N IT+ G +     ++++ ++  + + GN IGDEG 
Sbjct: 770 DIGARYVAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGA 829

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L D+  +  L L+   +  EG K++A+ LK N+ L ++ L  N ++       A
Sbjct: 830 KAFAEALRDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFA 889

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T++ L L  N+  A G   LA+ L+ N ++ E+ L+GN I  E
Sbjct: 890 EMLRVNQTLKHLWLIQNHITAEGTAQLARALQKNTTITEICLNGNLIKPE 939



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 77/153 (50%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E R  + + +       EG   +A+++  + +  EV    N I   G KAF   L+ + +
Sbjct: 782 ECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +  + L+  +L DE A+  AE+L+ N  L+ L
Sbjct: 842 LTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLRVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA AL +N+TI  + LNGN
Sbjct: 902 WLIQNHITAEGTAQLARALQKNTTITEICLNGN 934



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 84/189 (44%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G +    +L     L  L L 
Sbjct: 733 IRLSVNQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLTHLKLG 792

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG +C+   + ++  +  + +    + DEGAKA AE L+++  L  L L  N I
Sbjct: 793 KNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAFNGI 852

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA+AL +N+T+  + L  N      A   A+ L  N++L+ L L  N I  EG
Sbjct: 853 SPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLRVNQTLKHLWLIQNHITAEG 912

Query: 347 IRALMSGLS 355
              L   L 
Sbjct: 913 TAQLARALQ 921



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 60/120 (50%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           V M G   GDEG    AE+L  + +   +S A NGI+  G K+    L+ N  L  + L+
Sbjct: 817 VGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLT 876

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N + DE  +C  ++L  N  ++ L L    +  EG   +A  L+ N+ +  + LN N+I
Sbjct: 877 KNELNDEAAECFAEMLRVNQTLKHLWLIQNHITAEGTAQLARALQKNTTITEICLNGNLI 936


>gi|320168044|gb|EFW44943.1| hypothetical protein CAOG_02949 [Capsaspora owczarzaki ATCC 30864]
          Length = 406

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 116/219 (52%), Gaps = 29/219 (13%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DE AKAIAE LK N+ L  + L+ N +D +G  ++AEAL  N+T++ L+L  N+ G  GA
Sbjct: 33  DEEAKAIAEALKVNTTLTAVCLDENQLDGAGAQAIAEALKVNTTLKDLYLWANWIGDAGA 92

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+A+ L+ N +LR L L  N IGD G +A+                   +++ K    +
Sbjct: 93  QAIAEALKVNTNLRWLDLIDNQIGDAGAQAI-------------------ALALKANTTL 133

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            EY           L  N IGD GA+ IA+ALK N T+  + L GN I   GA  IA  L
Sbjct: 134 TEY----------TLDKNQIGDAGAQAIAEALKGNMTVQKLYLRGNQIGDIGAQEIAEAL 183

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           K N+ +T LDL  N IG  G +A+ E  + +  +  LK+
Sbjct: 184 KMNTTLTELDLRSNCIGNAGLQAIREASQVNRTLTRLKI 222



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I DE  +A+   L       AV  +  N +   GA  +AE +K   +L  + L+ N IGD
Sbjct: 31  IDDEEAKAIAEALKVNTTLTAVC-LDENQLDGAGAQAIAEALKVNTTLKDLYLWANWIGD 89

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA+ IA+ALK N  +  +DL  N I   GA AIA  LK N+ +T   L  N IG  GA+
Sbjct: 90  AGAQAIAEALKVNTNLRWLDLIDNQIGDAGAQAIALALKANTTLTEYTLDKNQIGDAGAQ 149

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           A++E LK +  +  L L   QIG  GA+ +A+ L+ N T++ LDLR+N + + G + + +
Sbjct: 150 AIAEALKGNMTVQKLYLRGNQIGDIGAQEIAEALKMNTTLTELDLRSNCIGNAGLQAIRE 209

Query: 522 SFKVVNEALT--SIDLAFNEIRDDGAFAIAQALKANEDV 558
           + + VN  LT   ID   N +    AF++   L   ED+
Sbjct: 210 ASQ-VNRTLTRLKIDDQINPL----AFSLLSRLATAEDL 243



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 106/209 (50%), Gaps = 12/209 (5%)

Query: 150 SKQTLNEFAKEL--------RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           S +++N+  +EL        R     DM      DE    +AE+L  N T   V    N 
Sbjct: 3   SYESMNQSQRELYDRVKNATRWLELCDM----IDDEEAKAIAEALKVNTTLTAVCLDENQ 58

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +  AG +A    L+ N  LK L L  N IGD G + + + L  N  +  L L    + D 
Sbjct: 59  LDGAGAQAIAEALKVNTTLKDLYLWANWIGDAGAQAIAEALKVNTNLRWLDLIDNQIGDA 118

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+AIA  LK N+ L    L+ N I  +G  ++AEAL  N T++ L+L GN  G +GA  
Sbjct: 119 GAQAIALALKANTTLTEYTLDKNQIGDAGAQAIAEALKGNMTVQKLYLRGNQIGDIGAQE 178

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           +A+ L+ N +L EL L  N IG+ G++A+
Sbjct: 179 IAEALKMNTTLTELDLRSNCIGNAGLQAI 207



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 110/229 (48%), Gaps = 31/229 (13%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           I DE  K + + L  N  +  + L    L   GA+AIAE LK N+ L+ L L  N I  +
Sbjct: 31  IDDEEAKAIAEALKVNTTLTAVCLDENQLDGAGAQAIAEALKVNTTLKDLYLWANWIGDA 90

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++AEAL  N+ +R L L  N  G  GA A+A  L+ N +L E  L  N IGD G +A
Sbjct: 91  GAQAIAEALKVNTNLRWLDLIDNQIGDAGAQAIALALKANTTLTEYTLDKNQIGDAGAQA 150

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           +   L   KG + V  +               Y++            N IGD GA++IA+
Sbjct: 151 IAEAL---KGNMTVQKL---------------YLRG-----------NQIGDIGAQEIAE 181

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL--DLAYNPIG 456
           ALK N T+T +DL  N I + G  AI    + N  +T L  D   NP+ 
Sbjct: 182 ALKMNTTLTELDLRSNCIGNAGLQAIREASQVNRTLTRLKIDDQINPLA 230



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + + E  K     ++V +        G   +AE+L  N T +++   AN I  AG +
Sbjct: 34  EEAKAIAEALKVNTTLTAVCLDENQLDGAGAQAIAEALKVNTTLKDLYLWANWIGDAGAQ 93

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L+ N  L+ L+L  N IGD G + +   L  N  +    L    + D GA+AIAE
Sbjct: 94  AIAEALKVNTNLRWLDLIDNQIGDAGAQAIALALKANTTLTEYTLDKNQIGDAGAQAIAE 153

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N  ++ L L  N I   G   +AEAL  N+T+  L L  N  G  G  A+ +  + 
Sbjct: 154 ALKGNMTVQKLYLRGNQIGDIGAQEIAEALKMNTTLTELDLRSNCIGNAGLQAIREASQV 213

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           N++L  L +      D+ I  L   L SR
Sbjct: 214 NRTLTRLKI------DDQINPLAFSLLSR 236



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 3/127 (2%)

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           I  + AKA++E LK +  +  + L   Q+  +GA+ +A+ L+ N T+  L L AN + D 
Sbjct: 31  IDDEEAKAIAEALKVNTTLTAVCLDENQLDGAGAQAIAEALKVNTTLKDLYLWANWIGDA 90

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           GA+ +A++ KV N  L  +DL  N+I D GA AIA ALKAN    +T   L  N +   G
Sbjct: 91  GAQAIAEALKV-NTNLRWLDLIDNQIGDAGAQAIALALKAN--TTLTEYTLDKNQIGDAG 147

Query: 575 QSALTDA 581
             A+ +A
Sbjct: 148 AQAIAEA 154


>gi|344286332|ref|XP_003414913.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like
            [Loxodonta africana]
          Length = 1139

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 163/357 (45%), Gaps = 10/357 (2%)

Query: 176  DEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
            D G+  L E L   N    ++SF    I+ A   A   VL +N  L  L  S   +    
Sbjct: 747  DSGMKLLCEGLKQPNSVLHKLSFYRCLISPASCGALAAVLSTNQWLTELEFSETELEASA 806

Query: 235  VKCLCDILVD-NAGVERLQLSSVDLRDEG---AKAIAELLKNNSILRVLELNNNMIDYSG 290
            VK LC+ L D N  +++L+L +  L +      K +A +L  NS L  L+L+ N +  +G
Sbjct: 807  VKFLCEGLKDPNCKLQKLKLCASFLPESSEAVCKYLASVLMCNSNLTELDLSENPLGDTG 866

Query: 291  FTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
               L E L   N  +  L L+           L+  L+ N++L+EL +  N++GD G++ 
Sbjct: 867  VKYLCEGLRHSNCKVEKLDLSTCSLTDASCVELSSFLQMNQTLKELFVFANALGDTGVQH 926

Query: 350  LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
            L  GL   KG +  L +   S+SA     +A+ + + +SL  + L  N I D G + + +
Sbjct: 927  LCEGLRHAKGIVENLVLSECSLSATCCEPLAQVLSSTRSLTRLLLINNKIEDLGLKLLCE 986

Query: 410  ALKQNRTITTIDLGGNNIHSKGASA--IARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
             LKQ       DL     H  GA    +   L  N  +  LDL+ N +G +G + L E L
Sbjct: 987  GLKQPHC-QLKDLALWTCHLTGACCQDLCNALYTNEHLRDLDLSDNALGDEGMQVLCEGL 1045

Query: 468  KFH-GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
            K     + TL L  C +       +A +L  N  +++LDL  N  RD G + L  + 
Sbjct: 1046 KHPCCKLQTLWLAECHLTDVCCGALASVLNRNENLTLLDLSGNDFRDLGVQMLCDAL 1102



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 168/376 (44%), Gaps = 9/376 (2%)

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLK 271
            V ++N  L  L    N + D G+K LC+ L   N+ + +L      +      A+A +L 
Sbjct: 728  VFETNQHLTDLEFVKNTLEDSGMKLLCEGLKQPNSVLHKLSFYRCLISPASCGALAAVLS 787

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNY---GGALGANALAKGLE 327
             N  L  LE +   ++ S    L E L + N  ++ L L  ++           LA  L 
Sbjct: 788  TNQWLTELEFSETELEASAVKFLCEGLKDPNCKLQKLKLCASFLPESSEAVCKYLASVLM 847

Query: 328  GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
             N +L EL L  N +GD G++ L  GL     K+  LD+   S++      ++ +++  +
Sbjct: 848  CNSNLTELDLSENPLGDTGVKYLCEGLRHSNCKVEKLDLSTCSLTDASCVELSSFLQMNQ 907

Query: 388  SLLWINLYMNDIGDEGAEKIADALKQNRTIT-TIDLGGNNIHSKGASAIARVLKDNSVIT 446
            +L  + ++ N +GD G + + + L+  + I   + L   ++ +     +A+VL     +T
Sbjct: 908  TLKELFVFANALGDTGVQHLCEGLRHAKGIVENLVLSECSLSATCCEPLAQVLSSTRSLT 967

Query: 447  SLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
             L L  N I   G K L E LK  H  +  L L  C +  +  + + + L  N  +  LD
Sbjct: 968  RLLLINNKIEDLGLKLLCEGLKQPHCQLKDLALWTCHLTGACCQDLCNALYTNEHLRDLD 1027

Query: 506  LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
            L  N L DEG + L +  K     L ++ LA   + D    A+A  L  NE+  +T L+L
Sbjct: 1028 LSDNALGDEGMQVLCEGLKHPCCKLQTLWLAECHLTDVCCGALASVLNRNEN--LTLLDL 1085

Query: 566  ANNFLTKFGQSALTDA 581
            + N     G   L DA
Sbjct: 1086 SGNDFRDLGVQMLCDA 1101



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 118/256 (46%), Gaps = 13/256 (5%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +D+S    GD G+ +L E L + N   E++  +   +T A        LQ N  LK 
Sbjct: 852  LTELDLSENPLGDTGVKYLCEGLRHSNCKVEKLDLSTCSLTDASCVELSSFLQMNQTLKE 911

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L +  N +GD GV+ LC+ L    G VE L LS   L     + +A++L +   L  L L
Sbjct: 912  LFVFANALGDTGVQHLCEGLRHAKGIVENLVLSECSLSATCCEPLAQVLSSTRSLTRLLL 971

Query: 282  NNNMIDYSGFTSLAEAL------LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
             NN I+  G   L E L      L++  + + HL G          L   L  N+ LR+L
Sbjct: 972  INNKIEDLGLKLLCEGLKQPHCQLKDLALWTCHLTGA-----CCQDLCNALYTNEHLRDL 1026

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L  N++GDEG++ L  GL     KL  L +    ++      +A  +   ++L  ++L 
Sbjct: 1027 DLSDNALGDEGMQVLCEGLKHPCCKLQTLWLAECHLTDVCCGALASVLNRNENLTLLDLS 1086

Query: 396  MNDIGDEGAEKIADAL 411
             ND  D G + + DAL
Sbjct: 1087 GNDFRDLGVQMLCDAL 1102



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+S    GDEG+  L E L +     + +  A   +T     A   VL  N  L  L+L
Sbjct: 1026 LDLSDNALGDEGMQVLCEGLKHPCCKLQTLWLAECHLTDVCCGALASVLNRNENLTLLDL 1085

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
            SGN   D GV+ LCD L+    + +LQ   +D
Sbjct: 1086 SGNDFRDLGVQMLCDALIH--PICKLQTFYID 1115


>gi|323447070|gb|EGB03030.1| hypothetical protein AURANDRAFT_34584 [Aureococcus anophagefferens]
          Length = 526

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 138/400 (34%), Positives = 195/400 (48%), Gaps = 37/400 (9%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           R+ G EG   L   LG +    +++     I   G K     L+SN +L  +NL  N IG
Sbjct: 92  RDMGVEGAKALVPLLGADSALRKLNIYRTAIGDEGAKVIAIALESNTSLLEINLGANAIG 151

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
            EG   L   L +N  +  L++ S  L ++GAKAIAE L  NS L  L+L +N +   G 
Sbjct: 152 PEGAVALAAALRENTTLLTLKVGSNALGNDGAKAIAEALGANSALHALDLCSNGVGTVGI 211

Query: 292 TSLAEALLENSTIRSLHLNG-NYGGALGANALAKGLEGNKSLRELHL----HG------- 339
            +LA AL  NST+R L L G +      A+ALAK L    +L+EL L    HG       
Sbjct: 212 DALAAALGTNSTLRKLRLGGADQICPYSAHALAKALSAGSALQELDLACSAHGVTGLGGY 271

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN-D 398
           + +GD+  +   +G ++    L VL +G N+I  +GA  +A  +    SL  ++L  N D
Sbjct: 272 HGLGDDAAKRFGAGFAAHPSLLRVLRLGRNNIGVEGARALAAML-GVGSLRSLDLSSNHD 330

Query: 399 IGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           IGDEGA  +A AL  N R++  ++L         A+A+A  L  NS +  L L    +  
Sbjct: 331 IGDEGAAALAAALVANPRSLLELNLNCIRSGPAAATALATALGANSALEKLSLNCTKVRD 390

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD--EG 515
           +GAKAL+  L  +  +  L L    IG +GA  +A  L  N T+  L++ +NG RD  EG
Sbjct: 391 EGAKALAAALCANSGLQELALEDAFIGRAGAVALAQALASNTTLRELNI-SNG-RDEMEG 448

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           A C                   N +RD GA A AQAL  N
Sbjct: 449 AAC------------------ANHVRDAGAVAFAQALGEN 470



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 153/325 (47%), Gaps = 46/325 (14%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYG-G 315
           +R++GA+AIA  LK N  LR LEL  + I  SG  +LA A+    +T+  L L  N   G
Sbjct: 36  IRNDGARAIAFALKGNCTLRRLELQESYISASGVKALALAIKTSPATLEDLALLYNRDMG 95

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA AL   L  + +LR+L+++  +IGDEG + +   L S                   
Sbjct: 96  VEGAKALVPLLGADSALRKLNIYRTAIGDEGAKVIAIALESN------------------ 137

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
                       SLL INL  N IG EGA  +A AL++N T+ T+ +G N + + GA AI
Sbjct: 138 -----------TSLLEINLGANAIGPEGAVALAAALRENTTLLTLKVGSNALGNDGAKAI 186

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC-QIGASGAEFVADM 494
           A  L  NS + +LDL  N +G  G  AL+  L  +  +  L+LG   QI    A  +A  
Sbjct: 187 AEALGANSALHALDLCSNGVGTVGIDALAAALGTNSTLRKLRLGGADQICPYSAHALAKA 246

Query: 495 LRYNNTISILDLRA-----------NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           L   + +  LDL             +GL D+ AK     F      L  + L  N I  +
Sbjct: 247 LSAGSALQELDLACSAHGVTGLGGYHGLGDDAAKRFGAGFAAHPSLLRVLRLGRNNIGVE 306

Query: 544 GAFAIAQALKANEDVAVTSLNLANN 568
           GA A+A  L      ++ SL+L++N
Sbjct: 307 GARALAAMLGVG---SLRSLDLSSN 328



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 126/235 (53%), Gaps = 6/235 (2%)

Query: 307 LHLNGNYGGAL---GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           L+ N  YGG +   GA A+A  L+GN +LR L L  + I   G++AL   + +    L  
Sbjct: 26  LYFNPLYGGLIRNDGARAIAFALKGNCTLRRLELQESYISASGVKALALAIKTSPATLED 85

Query: 364 LDI-GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           L +  N  +  +GA  +   +    +L  +N+Y   IGDEGA+ IA AL+ N ++  I+L
Sbjct: 86  LALLYNRDMGVEGAKALVPLLGADSALRKLNIYRTAIGDEGAKVIAIALESNTSLLEINL 145

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
           G N I  +GA A+A  L++N+ + +L +  N +G DGAKA++E L  +  ++ L L    
Sbjct: 146 GANAIGPEGAVALAAALRENTTLLTLKVGSNALGNDGAKAIAEALGANSALHALDLCSNG 205

Query: 483 IGASGAEFVADMLRYNNTISILDL-RANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
           +G  G + +A  L  N+T+  L L  A+ +    A  LA++      AL  +DLA
Sbjct: 206 VGTVGIDALAAALGTNSTLRKLRLGGADQICPYSAHALAKALS-AGSALQELDLA 259



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 189/415 (45%), Gaps = 50/415 (12%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN--SILRVLELN 282
           L G  I ++G + +   L  N  + RL+L    +   G KA+A  +K +  ++  +  L 
Sbjct: 31  LYGGLIRNDGARAIAFALKGNCTLRRLELQESYISASGVKALALAIKTSPATLEDLALLY 90

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           N  +   G  +L   L  +S +R L++     G  GA  +A  LE N SL E++L  N+I
Sbjct: 91  NRDMGVEGAKALVPLLGADSALRKLNIYRTAIGDEGAKVIAIALESNTSLLEINLGANAI 150

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           G EG  AL + L      L  L +G+N++   GA  +AE +    +L  ++L  N +G  
Sbjct: 151 GPEGAVALAAALRENT-TLLTLKVGSNALGNDGAKAIAEALGANSALHALDLCSNGVGTV 209

Query: 403 GAEKIADALKQNRTITTIDLGG-NNIHSKGASAIARVLKDNSVITSLDLA---------- 451
           G + +A AL  N T+  + LGG + I    A A+A+ L   S +  LDLA          
Sbjct: 210 GIDALAAALGTNSTLRKLRLGGADQICPYSAHALAKALSAGSALQELDLACSAHGVTGLG 269

Query: 452 -YNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            Y+ +G D AK        H + +  L+LG   IG  GA  +A ML   +  S LDL +N
Sbjct: 270 GYHGLGDDAAKRFGAGFAAHPSLLRVLRLGRNNIGVEGARALAAMLGVGSLRS-LDLSSN 328

Query: 510 -GLRDEGA-------------------KCL---------AQSFKVVNEALTSIDLAFNEI 540
             + DEGA                    C+           +    N AL  + L   ++
Sbjct: 329 HDIGDEGAAALAAALVANPRSLLELNLNCIRSGPAAATALATALGANSALEKLSLNCTKV 388

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 595
           RD+GA A+A AL AN    +  L L + F+ + G  AL  A+ L    + +E+NI
Sbjct: 389 RDEGAKALAAALCANS--GLQELALEDAFIGRAGAVAL--AQALASNTTLRELNI 439



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 129/416 (31%), Positives = 204/416 (49%), Gaps = 31/416 (7%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGN-P 229
           RN G   + F   +L  N T   +    + I+A+G+KA    ++++ A L+ L L  N  
Sbjct: 37  RNDGARAIAF---ALKGNCTLRRLELQESYISASGVKALALAIKTSPATLEDLALLYNRD 93

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +G EG K L  +L  ++ + +L +    + DEGAK IA  L++N+ L  + L  N I   
Sbjct: 94  MGVEGAKALVPLLGADSALRKLNIYRTAIGDEGAKVIAIALESNTSLLEINLGANAIGPE 153

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  +LA AL EN+T+ +L +  N  G  GA A+A+ L  N +L  L L  N +G  GI A
Sbjct: 154 GAVALAAALRENTTLLTLKVGSNALGNDGAKAIAEALGANSALHALDLCSNGVGTVGIDA 213

Query: 350 LMSGLSS----RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM--------- 396
           L + L +    RK +L     G + I    A  +A+ +    +L  ++L           
Sbjct: 214 LAAALGTNSTLRKLRLG----GADQICPYSAHALAKALSAGSALQELDLACSAHGVTGLG 269

Query: 397 --NDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             + +GD+ A++       + + +  + LG NNI  +GA A+A +L   S + SLDL+ N
Sbjct: 270 GYHGLGDDAAKRFGAGFAAHPSLLRVLRLGRNNIGVEGARALAAMLGVGS-LRSLDLSSN 328

Query: 454 -PIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             IG +GA AL+  L  +  ++  L L   + G + A  +A  L  N+ +  L L    +
Sbjct: 329 HDIGDEGAAALAAALVANPRSLLELNLNCIRSGPAAATALATALGANSALEKLSLNCTKV 388

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           RDEGAK    +    N  L  + L    I   GA A+AQAL +N    +  LN++N
Sbjct: 389 RDEGAK-ALAAALCANSGLQELALEDAFIGRAGAVALAQALASN--TTLRELNISN 441



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 142/337 (42%), Gaps = 57/337 (16%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG-NPIGD 232
            G++G   +AE+LG N     +   +NG+   GI A    L +N  L+ L L G + I  
Sbjct: 178 LGNDGAKAIAEALGANSALHALDLCSNGVGTVGIDALAAALGTNSTLRKLRLGGADQICP 237

Query: 233 EGVKCLCDILVDNAGVERLQLSSV-----------DLRDEGAKAI-AELLKNNSILRVLE 280
                L   L   + ++ L L+              L D+ AK   A    + S+LRVL 
Sbjct: 238 YSAHALAKALSAGSALQELDLACSAHGVTGLGGYHGLGDDAAKRFGAGFAAHPSLLRVLR 297

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY--------------------------- 313
           L  N I   G  +LA A+L   ++RSL L+ N+                           
Sbjct: 298 LGRNNIGVEGARALA-AMLGVGSLRSLDLSSNHDIGDEGAAALAAALVANPRSLLELNLN 356

Query: 314 ---GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
               G   A ALA  L  N +L +L L+   + DEG +AL + L +  G L  L + +  
Sbjct: 357 CIRSGPAAATALATALGANSALEKLSLNCTKVRDEGAKALAAALCANSG-LQELALEDAF 415

Query: 371 ISAKGAFHVAEYIKNCKSLLWINL-----------YMNDIGDEGAEKIADALKQNRTITT 419
           I   GA  +A+ + +  +L  +N+             N + D GA   A AL +N T+  
Sbjct: 416 IGRAGAVALAQALASNTTLRELNISNGRDEMEGAACANHVRDAGAVAFAQALGENSTLVK 475

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           + L G  + ++G +A+   L+ N+ +  + +  NP G
Sbjct: 476 LRLWGTGVGTRGCAALRSALETNTTLEFVSV-KNPQG 511


>gi|156370329|ref|XP_001628423.1| predicted protein [Nematostella vectensis]
 gi|156215399|gb|EDO36360.1| predicted protein [Nematostella vectensis]
          Length = 426

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 147/292 (50%), Gaps = 3/292 (1%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  NI  K ++L+ + +G  G   L   L  +  VE+L L    L++EGA++ A++LK+N
Sbjct: 32  LLQNIENKEISLAHHGLGPRGAMALARALAKSTTVEKLDLEENRLQEEGAESFAKMLKDN 91

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             +  L L  N +   G  ++ E +  ++ IR L L+ N        AL+KGL    +L+
Sbjct: 92  CYITELNLAGNAMSSRGAKAMGEIIGYSNYIRKLDLSFNNFIDKDGEALSKGLAATLTLK 151

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L  NS  + G   L  G+++    +  LD+  N +  KGA  + + +    S+  ++
Sbjct: 152 ELRLSHNSFSESGGELLAPGIAANYS-VEYLDLSWNHLRMKGAIAICKAMGENASIRVLD 210

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N   D+GA  + +AL+ N T+  +DL  N I  KGA A+++ L  N  +  L + +N
Sbjct: 211 LSWNGFADDGAAAMGNALRHNSTLKELDLSHNRITKKGAFALSKGLAVNDALRVLKIGFN 270

Query: 454 PIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           P  +DG  AL + ++ +    +  L L    +G    EF+ + +++N    I
Sbjct: 271 PFESDGTMALLKAMRNNAKSAMEELHLNNITVGKGVLEFLDEYMKHNPNFQI 322



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 134/271 (49%), Gaps = 2/271 (0%)

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           +LL+N   + + L  +  G  GA ALA+ L  + ++ +L L  N + +EG  +    L  
Sbjct: 31  SLLQNIENKEISLAHHGLGPRGAMALARALAKSTTVEKLDLEENRLQEEGAESFAKMLKD 90

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
               +  L++  N++S++GA  + E I     +  ++L  N+  D+  E ++  L    T
Sbjct: 91  -NCYITELNLAGNAMSSRGAKAMGEIIGYSNYIRKLDLSFNNFIDKDGEALSKGLAATLT 149

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  + L  N+    G   +A  +  N  +  LDL++N +   GA A+ + +  + +I  L
Sbjct: 150 LKELRLSHNSFSESGGELLAPGIAANYSVEYLDLSWNHLRMKGAIAICKAMGENASIRVL 209

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L W      GA  + + LR+N+T+  LDL  N +  +GA  L++    VN+AL  + + 
Sbjct: 210 DLSWNGFADDGAAAMGNALRHNSTLKELDLSHNRITKKGAFALSKGL-AVNDALRVLKIG 268

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           FN    DG  A+ +A++ N   A+  L+L N
Sbjct: 269 FNPFESDGTMALLKAMRNNAKSAMEELHLNN 299



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 116/216 (53%), Gaps = 3/216 (1%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           + + ++ +  +GA  +A  +    ++  ++L  N + +EGAE  A  LK N  IT ++L 
Sbjct: 41  ISLAHHGLGPRGAMALARALAKSTTVEKLDLEENRLQEEGAESFAKMLKDNCYITELNLA 100

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN + S+GA A+  ++  ++ I  LDL++N       +ALS+ L     +  L+L     
Sbjct: 101 GNAMSSRGAKAMGEIIGYSNYIRKLDLSFNNFIDKDGEALSKGLAATLTLKELRLSHNSF 160

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             SG E +A  +  N ++  LDL  N LR +GA  + ++    N ++  +DL++N   DD
Sbjct: 161 SESGGELLAPGIAANYSVEYLDLSWNHLRMKGAIAICKAMG-ENASIRVLDLSWNGFADD 219

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
           GA A+  AL+ N    +  L+L++N +TK G  AL+
Sbjct: 220 GAAAMGNALRHNS--TLKELDLSHNRITKKGAFALS 253



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 126/261 (48%), Gaps = 1/261 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + ++    G  G   LA +L  + T E++    N +   G ++F  +L+ N  +  LNL+
Sbjct: 41  ISLAHHGLGPRGAMALARALAKSTTVEKLDLEENRLQEEGAESFAKMLKDNCYITELNLA 100

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +   G K + +I+  +  + +L LS  +  D+  +A+++ L     L+ L L++N  
Sbjct: 101 GNAMSSRGAKAMGEIIGYSNYIRKLDLSFNNFIDKDGEALSKGLAATLTLKELRLSHNSF 160

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             SG   LA  +  N ++  L L+ N+    GA A+ K +  N S+R L L  N   D+G
Sbjct: 161 SESGGELLAPGIAANYSVEYLDLSWNHLRMKGAIAICKAMGENASIRVLDLSWNGFADDG 220

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             A+ + L      L  LD+ +N I+ KGAF +++ +    +L  + +  N    +G   
Sbjct: 221 AAAMGNAL-RHNSTLKELDLSHNRITKKGAFALSKGLAVNDALRVLKIGFNPFESDGTMA 279

Query: 407 IADALKQNRTITTIDLGGNNI 427
           +  A++ N      +L  NNI
Sbjct: 280 LLKAMRNNAKSAMEELHLNNI 300



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 6/234 (2%)

Query: 157 FAKELR---AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           FAK L+     + ++++G      G   + E +GY+    ++  + N       +A    
Sbjct: 84  FAKMLKDNCYITELNLAGNAMSSRGAKAMGEIIGYSNYIRKLDLSFNNFIDKDGEALSKG 143

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L + + LK L LS N   + G + L   +  N  VE L LS   LR +GA AI + +  N
Sbjct: 144 LAATLTLKELRLSHNSFSESGGELLAPGIAANYSVEYLDLSWNHLRMKGAIAICKAMGEN 203

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + +RVL+L+ N     G  ++  AL  NST++ L L+ N     GA AL+KGL  N +LR
Sbjct: 204 ASIRVLDLSWNGFADDGAAAMGNALRHNSTLKELDLSHNRITKKGAFALSKGLAVNDALR 263

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA-KGAFH-VAEYIKN 385
            L +  N    +G  AL+  + +   K A+ ++  N+I+  KG    + EY+K+
Sbjct: 264 VLKIGFNPFESDGTMALLKAMRN-NAKSAMEELHLNNITVGKGVLEFLDEYMKH 316


>gi|428181132|gb|EKX49997.1| hypothetical protein GUITHDRAFT_67409 [Guillardia theta CCMP2712]
          Length = 335

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 132/247 (53%), Gaps = 3/247 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           ++ L L  + +GDEGV+ L + L  +  +  L+L    +   GA +I  +L  N  +RVL
Sbjct: 24  IRKLYLGQDGLGDEGVQALAEFLSKDCKLNELRLHDNGIGSRGASSICSVLHLNQSMRVL 83

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L +N I   G  +    L  NS++  L L+GN     G   LA  L  NK+LR LHL  
Sbjct: 84  VLGHNRIGELGAAAAGLLLRFNSSLTDLDLSGNELRDEGVKLLADCLPQNKTLRNLHLAR 143

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKSLLWINLYMN 397
           N  G +G +A    L++    L  +++G+N + A+GA H++  +  KN + +  ++L   
Sbjct: 144 NQFGPKGAKAFADALTAGGSSLFRVNLGSNKLRAEGAKHLSSMLLSKNLE-ISHLHLAAA 202

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           DIGDEGA  +ADA+K+NRT+  + L  N I   GA  +A  L+ N  ++ L +  N I +
Sbjct: 203 DIGDEGATSLADAMKENRTLCALYLQSNGIMDAGAQQLAEALRVNCTLSELHVDGNSISS 262

Query: 458 DGAKALS 464
            G  AL+
Sbjct: 263 KGVSALA 269



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 140/292 (47%), Gaps = 35/292 (11%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GDEG+  LAE L  +    E+    NGI + G  +   VL  N +++ L L  N IG+ 
Sbjct: 34  LGDEGVQALAEFLSKDCKLNELRLHDNGIGSRGASSICSVLHLNQSMRVLVLGHNRIGEL 93

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G      +L  N+ +  L LS  +LRDEG K                             
Sbjct: 94  GAAAAGLLLRFNSSLTDLDLSGNELRDEGVKL---------------------------- 125

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLRELHLHGNSIGDEGIRALMS 352
           LA+ L +N T+R+LHL  N  G  GA A A  L  G  SL  ++L  N +  EG + L S
Sbjct: 126 LADCLPQNKTLRNLHLARNQFGPKGAKAFADALTAGGSSLFRVNLGSNKLRAEGAKHLSS 185

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L S+  +++ L +    I  +GA  +A+ +K  ++L  + L  N I D GA+++A+AL+
Sbjct: 186 MLLSKNLEISHLHLAAADIGDEGATSLADAMKENRTLCALYLQSNGIMDAGAQQLAEALR 245

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            N T++ + + GN+I SKG SA+A          S+ L   P+  D   AL+
Sbjct: 246 VNCTLSELHVDGNSISSKGVSALAL------ASASMPLVLRPLPVDKRTALA 291



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 150/321 (46%), Gaps = 40/321 (12%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + +L L    L DEG +A+AE L  +  L  L L++N I   G +S+   L  N ++R L
Sbjct: 24  IRKLYLGQDGLGDEGVQALAEFLSKDCKLNELRLHDNGIGSRGASSICSVLHLNQSMRVL 83

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L  N  G LGA A    L  N SL +L L GN + DEG++ L                 
Sbjct: 84  VLGHNRIGELGAAAAGLLLRFNSSLTDLDLSGNELRDEGVKLL----------------- 126

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN-RTITTIDLGGNN 426
                       A+ +   K+L  ++L  N  G +GA+  ADAL     ++  ++LG N 
Sbjct: 127 ------------ADCLPQNKTLRNLHLARNQFGPKGAKAFADALTAGGSSLFRVNLGSNK 174

Query: 427 IHSKGASAIARVL-KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           + ++GA  ++ +L   N  I+ L LA   IG +GA +L++ +K +  +  L L    I  
Sbjct: 175 LRAEGAKHLSSMLLSKNLEISHLHLAAADIGDEGATSLADAMKENRTLCALYLQSNGIMD 234

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
           +GA+ +A+ LR N T+S L +  N +  +G   LA        A  S+ L    +  D  
Sbjct: 235 AGAQQLAEALRVNCTLSELHVDGNSISSKGVSALAL-------ASASMPLVLRPLPVDKR 287

Query: 546 FAIAQALKAN--EDVAVTSLN 564
            A+A  L A    D  ++SL+
Sbjct: 288 TALAMGLHARLGADSPLSSLD 308



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 34/265 (12%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI-KNCKSLL 390
           +R+L+L  + +GDEG++AL                             AE++ K+CK L 
Sbjct: 24  IRKLYLGQDGLGDEGVQAL-----------------------------AEFLSKDCK-LN 53

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + L+ N IG  GA  I   L  N+++  + LG N I   GA+A   +L+ NS +T LDL
Sbjct: 54  ELRLHDNGIGSRGASSICSVLHLNQSMRVLVLGHNRIGELGAAAAGLLLRFNSSLTDLDL 113

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY-NNTISILDLRAN 509
           + N +  +G K L++ L  +  +  L L   Q G  GA+  AD L    +++  ++L +N
Sbjct: 114 SGNELRDEGVKLLADCLPQNKTLRNLHLARNQFGPKGAKAFADALTAGGSSLFRVNLGSN 173

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
            LR EGAK L+      N  ++ + LA  +I D+GA ++A A+K N    + +L L +N 
Sbjct: 174 KLRAEGAKHLSSMLLSKNLEISHLHLAAADIGDEGATSLADAMKENR--TLCALYLQSNG 231

Query: 570 LTKFGQSALTDAKDLVYEMSEKEVN 594
           +   G   L +A  +   +SE  V+
Sbjct: 232 IMDAGAQQLAEALRVNCTLSELHVD 256


>gi|260819104|ref|XP_002604877.1| hypothetical protein BRAFLDRAFT_77288 [Branchiostoma floridae]
 gi|229290206|gb|EEN60887.1| hypothetical protein BRAFLDRAFT_77288 [Branchiostoma floridae]
          Length = 486

 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 124/237 (52%), Gaps = 4/237 (1%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           +  L +   S+G  G RA+   ++     +  LD+ +N + A+GA+ V E +K  + +  
Sbjct: 147 VHRLRIRHRSLGPLGTRAICVPVAMSP-YITALDLEDNGMGAEGAWSVTEMLKANQQITT 205

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +NL  N++G EGA  +A+ L++N+ IT+IDL GN+         ARVLK+N+ +  L L 
Sbjct: 206 VNLSYNNLGPEGALAVAEMLEENKVITSIDLSGNHFGESDGVHFARVLKENTTLQELILK 265

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N    +GA+ + + L  +  +  L L W  I   GA  +   ++ N  +  LD+  NG 
Sbjct: 266 ENEFRENGARLIGKGLVLNSTLRRLDLSWNHIRNKGALAICTAMKKNLGLRDLDVSWNGF 325

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            D GA  +A + K VN  LT +DL  N I   G  AIA AL  N+   +T+L +  N
Sbjct: 326 SDAGAIAMAATLK-VNVTLTDLDLTNNRIGPTGVRAIANALLVNQ--TLTTLRMGKN 379



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 119/225 (52%), Gaps = 3/225 (1%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R  ++  L I + S+   G   +   +     +  ++L  N +G EGA  + + LK N+ 
Sbjct: 143 RMMRVHRLRIRHRSLGPLGTRAICVPVAMSPYITALDLEDNGMGAEGAWSVTEMLKANQQ 202

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           ITT++L  NN+  +GA A+A +L++N VITS+DL+ N  G       + VLK +  +  L
Sbjct: 203 ITTVNLSYNNLGPEGALAVAEMLEENKVITSIDLSGNHFGESDGVHFARVLKENTTLQEL 262

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L   +   +GA  +   L  N+T+  LDL  N +R++GA  +  + K  N  L  +D++
Sbjct: 263 ILKENEFRENGARLIGKGLVLNSTLRRLDLSWNHIRNKGALAICTAMKK-NLGLRDLDVS 321

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           +N   D GA A+A  LK N  V +T L+L NN +   G  A+ +A
Sbjct: 322 WNGFSDAGAIAMAATLKVN--VTLTDLDLTNNRIGPTGVRAIANA 364



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 126/236 (53%), Gaps = 3/236 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           +  L+L  N +G EG   + ++L  N  +  + LS  +L  EGA A+AE+L+ N ++  +
Sbjct: 175 ITALDLEDNGMGAEGAWSVTEMLKANQQITTVNLSYNNLGPEGALAVAEMLEENKVITSI 234

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L+ N    S     A  L EN+T++ L L  N     GA  + KGL  N +LR L L  
Sbjct: 235 DLSGNHFGESDGVHFARVLKENTTLQELILKENEFRENGARLIGKGLVLNSTLRRLDLSW 294

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I ++G  A+ + +    G L  LD+  N  S  GA  +A  +K   +L  ++L  N I
Sbjct: 295 NHIRNKGALAICTAMKKNLG-LRDLDVSWNGFSDAGAIAMAATLKVNVTLTDLDLTNNRI 353

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNI-HSKGASAIARVLKD-NSVITSLDLAYN 453
           G  G   IA+AL  N+T+TT+ +G NN+ + +GA  +  + K+ NS ++ LDL  +
Sbjct: 354 GPTGVRAIANALLVNQTLTTLRMGKNNVPYEEGAILLKAIKKNKNSAMSQLDLTLD 409



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 132/292 (45%), Gaps = 30/292 (10%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           V RL++    L   G +AI   +  +  +  L+L +N +   G  S+ E L  N  I ++
Sbjct: 147 VHRLRIRHRSLGPLGTRAICVPVAMSPYITALDLEDNGMGAEGAWSVTEMLKANQQITTV 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +L+ N  G  GA A+A+ LE NK +  + L GN  G+                       
Sbjct: 207 NLSYNNLGPEGALAVAEMLEENKVITSIDLSGNHFGE----------------------- 243

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
                     H A  +K   +L  + L  N+  + GA  I   L  N T+  +DL  N+I
Sbjct: 244 ------SDGVHFARVLKENTTLQELILKENEFRENGARLIGKGLVLNSTLRRLDLSWNHI 297

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +KGA AI   +K N  +  LD+++N     GA A++  LK +  +  L L   +IG +G
Sbjct: 298 RNKGALAICTAMKKNLGLRDLDVSWNGFSDAGAIAMAATLKVNVTLTDLDLTNNRIGPTG 357

Query: 488 AEFVADMLRYNNTISILDLRANGL-RDEGAKCLAQSFKVVNEALTSIDLAFN 538
              +A+ L  N T++ L +  N +  +EGA  L    K  N A++ +DL  +
Sbjct: 358 VRAIANALLVNQTLTTLRMGKNNVPYEEGAILLKAIKKNKNSAMSQLDLTLD 409



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 1/250 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L +    +G  G + +C  +  +  +  L L    +  EGA ++ E+LK N  +  + L+
Sbjct: 150 LRIRHRSLGPLGTRAICVPVAMSPYITALDLEDNGMGAEGAWSVTEMLKANQQITTVNLS 209

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N +   G  ++AE L EN  I S+ L+GN+ G       A+ L+ N +L+EL L  N  
Sbjct: 210 YNNLGPEGALAVAEMLEENKVITSIDLSGNHFGESDGVHFARVLKENTTLQELILKENEF 269

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            + G R +  GL      L  LD+  N I  KGA  +   +K    L  +++  N   D 
Sbjct: 270 RENGARLIGKGL-VLNSTLRRLDLSWNHIRNKGALAICTAMKKNLGLRDLDVSWNGFSDA 328

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  +A  LK N T+T +DL  N I   G  AIA  L  N  +T+L +  N +  +    
Sbjct: 329 GAIAMAATLKVNVTLTDLDLTNNRIGPTGVRAIANALLVNQTLTTLRMGKNNVPYEEGAI 388

Query: 463 LSEVLKFHGN 472
           L + +K + N
Sbjct: 389 LLKAIKKNKN 398



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 2/228 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+     G EG + + E L  NQ    V+ + N +   G  A   +L+ N  + ++
Sbjct: 175 ITALDLEDNGMGAEGAWSVTEMLKANQQITTVNLSYNNLGPEGALAVAEMLEENKVITSI 234

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LSGN  G+        +L +N  ++ L L   + R+ GA+ I + L  NS LR L+L+ 
Sbjct: 235 DLSGNHFGESDGVHFARVLKENTTLQELILKENEFRENGARLIGKGLVLNSTLRRLDLSW 294

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  ++  A+ +N  +R L ++ N     GA A+A  L+ N +L +L L  N IG
Sbjct: 295 NHIRNKGALAICTAMKKNLGLRDLDVSWNGFSDAGAIAMAATLKVNVTLTDLDLTNNRIG 354

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSIS-AKGAFHVAEYIKNCKSLL 390
             G+RA+ + L   +  L  L +G N++   +GA  +    KN  S +
Sbjct: 355 PTGVRAIANALLVNQ-TLTTLRMGKNNVPYEEGAILLKAIKKNKNSAM 401



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 1/219 (0%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E   ++ E  K  +  ++V++S  N G EG   +AE L  N+    +  + N    +   
Sbjct: 188 EGAWSVTEMLKANQQITTVNLSYNNLGPEGALAVAEMLEENKVITSIDLSGNHFGESDGV 247

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            F  VL+ N  L+ L L  N   + G + +   LV N+ + RL LS   +R++GA AI  
Sbjct: 248 HFARVLKENTTLQELILKENEFRENGARLIGKGLVLNSTLRRLDLSWNHIRNKGALAICT 307

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            +K N  LR L+++ N    +G  ++A  L  N T+  L L  N  G  G  A+A  L  
Sbjct: 308 AMKKNLGLRDLDVSWNGFSDAGAIAMAATLKVNVTLTDLDLTNNRIGPTGVRAIANALLV 367

Query: 329 NKSLRELHLHGNSIG-DEGIRALMSGLSSRKGKLAVLDI 366
           N++L  L +  N++  +EG   L +   ++   ++ LD+
Sbjct: 368 NQTLTTLRMGKNNVPYEEGAILLKAIKKNKNSAMSQLDL 406


>gi|320164574|gb|EFW41473.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 485

 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 158/323 (48%), Gaps = 39/323 (12%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L LS   + +  A+A+ E LK N+ L  L L+ N I      ++A+ L  N TI++L L 
Sbjct: 24  LMLSGARMNEAEAQAVVEGLKVNTKLIFLSLSANPI---AAVTIADLLRVNKTIQNLFLQ 80

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G   A A+A  L+ N +L +L L  N IGD                          
Sbjct: 81  ENQIGDADAVAIADALKVNTTLNDLDLKVNQIGD-------------------------- 114

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
               GA  +A+ +K   +L  + L  N IGD GA  IADALK N T+  + L  N I   
Sbjct: 115 ---AGAVAIADALKLNMTLKKLRLDENQIGDAGAVAIADALKLNTTLARLLLVENQIGKA 171

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AIA  L  N+ +T L L  N IG  GA+A++E LK +  +  L+L   QIG  GA+ 
Sbjct: 172 GAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLTELRLHQTQIGDVGAQA 231

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           +A+ L+ N T+  L L  N + D GA+ +A++ K  N    ++DL  N I  D AF   Q
Sbjct: 232 IAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALK-GNPTGITVDLNSNCI--DRAF--VQ 286

Query: 551 ALKANEDVAVTSLNLANNFLTKF 573
            +K  +      L L+N+  T+F
Sbjct: 287 LVKQAQKTKNRGLYLSND--TQF 307



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 96/186 (51%), Gaps = 1/186 (0%)

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L  N T  ++    N I  AG  A    L+ N+ LK L L  N IGD G   + D L  N
Sbjct: 96  LKVNTTLNDLDLKVNQIGDAGAVAIADALKLNMTLKKLRLDENQIGDAGAVAIADALKLN 155

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             + RL L    +   GA+AIAE L  N+ +  L L+ N I  +G  ++AEAL  N+T+ 
Sbjct: 156 TTLARLLLVENQIGKAGAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLT 215

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L+    G +GA A+A+ L+ N +L +L L GN IGD G +A+   L      + V D
Sbjct: 216 ELRLHQTQIGDVGAQAIAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALKGNPTGITV-D 274

Query: 366 IGNNSI 371
           + +N I
Sbjct: 275 LNSNCI 280



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 2/140 (1%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G  G   +AE+L  N T  E+    N I  AG +A    L+ N  L  L L    IGD
Sbjct: 167 QIGKAGAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLTELRLHQTQIGD 226

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + + + L  N  +  LQLS   + D GA+AIAE LK N     ++LN+N ID +   
Sbjct: 227 VGAQAIAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALKGNPTGITVDLNSNCIDRAFVQ 286

Query: 293 SLAEALLENSTIRSLHLNGN 312
            + +A  + +  R L+L+ +
Sbjct: 287 LVKQA--QKTKNRGLYLSND 304


>gi|326436454|gb|EGD82024.1| hypothetical protein PTSG_11909 [Salpingoeca sp. ATCC 50818]
          Length = 1015

 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 1/202 (0%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL  E +Q L   A   +    VD+S R+FGD+    +A +L  N   + +S + N I  
Sbjct: 490 KLTEEGQQLLRAIANN-KCSEYVDLSSRSFGDDEARAIAVALRRNTRLKALSLSDNSIGP 548

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G  +F   L+ N  L  L    N  G++G   + ++L+DN  + +L L +  +  EGAK
Sbjct: 549 GGAASFAHGLRDNTVLTELRFINNSFGNQGAASMAELLMDNHVITKLSLRNNSIGPEGAK 608

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+AE+L++N+ LR L L++N I   G  +LA  L EN ++ +LHL+GN  G  GA ALA 
Sbjct: 609 ALAEMLRHNTTLRTLFLSDNFIGPGGAEALATILSENDSLTTLHLSGNSIGNDGAAALAG 668

Query: 325 GLEGNKSLRELHLHGNSIGDEG 346
           GL  N  L +L L+ N IG +G
Sbjct: 669 GLRSNTGLHKLDLYLNDIGPKG 690



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 1/200 (0%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +D+ + S     A  +A  ++    L  ++L  N IG  GA   A  L+ N  +T +   
Sbjct: 511 VDLSSRSFGDDEARAIAVALRRNTRLKALSLSDNSIGPGGAASFAHGLRDNTVLTELRFI 570

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N+  ++GA+++A +L DN VIT L L  N IG +GAKAL+E+L+ +  + TL L    I
Sbjct: 571 NNSFGNQGAASMAELLMDNHVITKLSLRNNSIGPEGAKALAEMLRHNTTLRTLFLSDNFI 630

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G  GAE +A +L  N++++ L L  N + ++GA  LA   +  N  L  +DL  N+I   
Sbjct: 631 GPGGAEALATILSENDSLTTLHLSGNSIGNDGAAALAGGLRS-NTGLHKLDLYLNDIGPK 689

Query: 544 GAFAIAQALKANEDVAVTSL 563
           GA A+A  L  N+D+    L
Sbjct: 690 GAVALAAVLAHNQDLEYLRL 709



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 1/194 (0%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           L + +  NK    + L   S GD+  RA+   L  R  +L  L + +NSI   GA   A 
Sbjct: 498 LLRAIANNKCSEYVDLSSRSFGDDEARAIAVALR-RNTRLKALSLSDNSIGPGGAASFAH 556

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +++   L  +    N  G++GA  +A+ L  N  IT + L  N+I  +GA A+A +L+ 
Sbjct: 557 GLRDNTVLTELRFINNSFGNQGAASMAELLMDNHVITKLSLRNNSIGPEGAKALAEMLRH 616

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ + +L L+ N IG  GA+AL+ +L  + ++ TL L    IG  GA  +A  LR N  +
Sbjct: 617 NTTLRTLFLSDNFIGPGGAEALATILSENDSLTTLHLSGNSIGNDGAAALAGGLRSNTGL 676

Query: 502 SILDLRANGLRDEG 515
             LDL  N +  +G
Sbjct: 677 HKLDLYLNDIGPKG 690



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 1/214 (0%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            L  A+  N     + L+    G   A A+A  L  N  L+ L L  NSIG  G  +   
Sbjct: 497 QLLRAIANNKCSEYVDLSSRSFGDDEARAIAVALRRNTRLKALSLSDNSIGPGGAASFAH 556

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
           GL      L  L   NNS   +GA  +AE + +   +  ++L  N IG EGA+ +A+ L+
Sbjct: 557 GLRDNT-VLTELRFINNSFGNQGAASMAELLMDNHVITKLSLRNNSIGPEGAKALAEMLR 615

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N T+ T+ L  N I   GA A+A +L +N  +T+L L+ N IG DGA AL+  L+ +  
Sbjct: 616 HNTTLRTLFLSDNFIGPGGAEALATILSENDSLTTLHLSGNSIGNDGAAALAGGLRSNTG 675

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           ++ L L    IG  GA  +A +L +N  +  L L
Sbjct: 676 LHKLDLYLNDIGPKGAVALAAVLAHNQDLEYLRL 709



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 31/196 (15%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           I N K   +++L     GD+ A  IA AL++N  +  + L  N+I   GA++ A  L+DN
Sbjct: 502 IANNKCSEYVDLSSRSFGDDEARAIAVALRRNTRLKALSLSDNSIGPGGAASFAHGLRDN 561

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           +V+T L    N  G  GA                        AS AE + D    N+ I+
Sbjct: 562 TVLTELRFINNSFGNQGA------------------------ASMAELLMD----NHVIT 593

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L LR N +  EGAK LA+  +  N  L ++ L+ N I   GA A+A  L  N+  ++T+
Sbjct: 594 KLSLRNNSIGPEGAKALAEMLR-HNTTLRTLFLSDNFIGPGGAEALATILSEND--SLTT 650

Query: 563 LNLANNFLTKFGQSAL 578
           L+L+ N +   G +AL
Sbjct: 651 LHLSGNSIGNDGAAAL 666


>gi|241116834|ref|XP_002401630.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215493174|gb|EEC02815.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 383

 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 118/357 (33%), Positives = 188/357 (52%), Gaps = 38/357 (10%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N IGD G   L   L   + +  L L+S D+  +G +++A  LK+  I  +L L 
Sbjct: 36  LDLSNNHIGDSGAVALASGL-KGSKIISLNLTSNDIEQKGVQSLANSLKDTEI-TILNLC 93

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  +LA +L +NS I +L L GN  G  G + LA+ L+G + L  L LH N I
Sbjct: 94  ANKIGQTGAITLANSL-KNSQITNLELGGNRIGDHGIHILAQNLKGTQ-LTYLGLHYNDI 151

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK--------------- 387
           G+EG++AL+ G+  +  K+  L + +N I  + +  +A  +K+                 
Sbjct: 152 GNEGVQALIHGI--QDTKIINLKLSSNHIWYEESETLARSLKHTHITHLSLAGSIGRGVL 209

Query: 388 ----------SLLWINLYMN-DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
                      ++ ++L  N  I  +  + +A  LK N  IT ++   N +  +GA A++
Sbjct: 210 KVISENLVGTQIINLDLSCNRSITSKDMKFLAKDLK-NTKITELNFYNNRMGEEGAIALS 268

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             LKD + IT+LDL+YN IG +G KAL+ VL    NI +L L   ++   GA+ +A +L 
Sbjct: 269 EGLKD-TQITNLDLSYNRIGIEGTKALANVLD-KTNIMSLNLRKSRMEDDGAKALAVVLP 326

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            N  I  L+L  + + DEG + LA+S +  N  +T+++L  N I   GA A+A+ LK
Sbjct: 327 -NTKIKYLNLYKSLIGDEGIRALAESLE--NTQITNLNLGLNSIDQAGAMALAKGLK 380



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 142/304 (46%), Gaps = 35/304 (11%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +++     G  G   LA SL  +Q    +    N I   GI      L+    L  L
Sbjct: 87  ITILNLCANKIGQTGAITLANSLKNSQITN-LELGGNRIGDHGIHILAQNLKGT-QLTYL 144

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-------- 275
            L  N IG+EGV+ L   + D   +  L+LSS  +  E ++ +A  LK+  I        
Sbjct: 145 GLHYNDIGNEGVQALIHGIQDTK-IINLKLSSNHIWYEESETLARSLKHTHITHLSLAGS 203

Query: 276 -----LRVLELN-------------NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
                L+V+  N             N  I       LA+ L +N+ I  L+   N  G  
Sbjct: 204 IGRGVLKVISENLVGTQIINLDLSCNRSITSKDMKFLAKDL-KNTKITELNFYNNRMGEE 262

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA AL++GL+ +  +  L L  N IG EG +AL + L   K  +  L++  + +   GA 
Sbjct: 263 GAIALSEGLK-DTQITNLDLSYNRIGIEGTKALANVLD--KTNIMSLNLRKSRMEDDGAK 319

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  + N K + ++NLY + IGDEG   +A++L +N  IT ++LG N+I   GA A+A+
Sbjct: 320 ALAVVLPNTK-IKYLNLYKSLIGDEGIRALAESL-ENTQITNLNLGLNSIDQAGAMALAK 377

Query: 438 VLKD 441
            LK+
Sbjct: 378 GLKN 381



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 85/166 (51%), Gaps = 8/166 (4%)

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           +N  IT + L    +  +    +A+VLKD + I  LDL+ N IG  GA AL+  LK    
Sbjct: 2   KNTKITHLSLHAYKMKKEIMPFLAQVLKD-TQIAHLDLSNNHIGDSGAVALASGLKG-SK 59

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           I +L L    I   G + +A+ L+ +  I+IL+L AN +   GA  LA S K  N  +T+
Sbjct: 60  IISLNLTSNDIEQKGVQSLANSLK-DTEITILNLCANKIGQTGAITLANSLK--NSQITN 116

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           ++L  N I D G   +AQ LK  +   +T L L  N +   G  AL
Sbjct: 117 LELGGNRIGDHGIHILAQNLKGTQ---LTYLGLHYNDIGNEGVQAL 159


>gi|123477306|ref|XP_001321821.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121904655|gb|EAY09598.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 686

 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 194/423 (45%), Gaps = 25/423 (5%)

Query: 174 FGDEGL--FFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           F +E L   F+A+S  +N +  +  F    I     K F         LK  ++S + IG
Sbjct: 33  FSEEELKSIFIAKSQDFNISTSDKMFQRFYINQMK-KPF---------LKIFDMSSSSIG 82

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
            +  + +C +++++  +  + LS   + ++GA +IA+ L   + +  L+L++N I   G 
Sbjct: 83  PKATEVICSLILNHPHIRSINLSGNSIGNKGATSIAQFLLQTTKIISLDLSSNAILDKGL 142

Query: 292 TSLAEALLENSTIRSLHLNG------NYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            ++  AL  N ++ SL +        N  G   A  LA  L  N+ L EL L    I  +
Sbjct: 143 YAIFYALKSNPSVISLKIGSTSSVARNSVGQSAAKELASTLSMNQVLSELDLSMAKITCD 202

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
            +  +  GL      L VL+I NN+I +KG   V + I N  +++ +N+  N I D+ A 
Sbjct: 203 LMIHISKGLELNHS-LQVLNISNNNICSKGCRKVLQAILNS-NIVDLNISNNAIKDDIAP 260

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
                + +N++I  +++  N +      AI     + S +   +L++NP+   G      
Sbjct: 261 DFIKYISKNKSIKRLNISNNQLTKAFTKAITPAFANYSELIEFNLSHNPLTGAGIDEFGP 320

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L  +  I TL +  CQI  +G +     L  N +++ L L  N + DEGAK  A+  K 
Sbjct: 321 ALAMNLKIKTLNISMCQIDNNGFKSFCKKLAENYSLTTLILSHNPIGDEGAKNFAEVIK- 379

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL--TKFGQSALTDAKD 583
            +  L  IDL   EI D G   +  AL A++  ++  ++  NN L   K    AL D   
Sbjct: 380 EHPILKEIDLEMTEITDVGGDVLIPALGASK--SIEKVSFRNNLLGNPKVISKALMDNTL 437

Query: 584 LVY 586
           L Y
Sbjct: 438 LYY 440



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 133/295 (45%), Gaps = 14/295 (4%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           LA +L  NQ   E+  +   IT   +      L+ N +L+ LN+S N I  +G + +   
Sbjct: 179 LASTLSMNQVLSELDLSMAKITCDLMIHISKGLELNHSLQVLNISNNNICSKGCRKVLQA 238

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           ++ N+ +  L +S+  ++D+ A    + +  N  ++ L ++NN +  +   ++  A    
Sbjct: 239 IL-NSNIVDLNISNNAIKDDIAPDFIKYISKNKSIKRLNISNNQLTKAFTKAITPAFANY 297

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S +   +L+ N     G +     L  N  ++ L++    I + G ++    L+     L
Sbjct: 298 SELIEFNLSHNPLTGAGIDEFGPALAMNLKIKTLNISMCQIDNNGFKSFCKKLAENYS-L 356

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L + +N I  +GA + AE IK    L  I+L M +I D G + +  AL  +++I  + 
Sbjct: 357 TTLILSHNPIGDEGAKNFAEVIKEHPILKEIDLEMTEITDVGGDVLIPALGASKSIEKVS 416

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              N +       I++ L DN+++   D+ YN I            K+H +I  L
Sbjct: 417 FRNNLLG--NPKVISKALMDNTLLYYFDIDYNDIE----------YKYHADIEKL 459


>gi|149759248|ref|XP_001488525.1| PREDICTED: ribonuclease inhibitor-like [Equus caballus]
          Length = 456

 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 171/358 (47%), Gaps = 5/358 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + + L       +++S     +T AG      VL+S  +L+
Sbjct: 52  SLTELSLRTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCCLTEAGCGVLPSVLRSVHSLR 111

Query: 222 TLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+GD G++ LC+ +L     +E+LQL   +L       +A +L+     + L 
Sbjct: 112 ELHLSDNPLGDVGLQLLCEGLLHPQCHLEKLQLEYCNLTAASCGPLAAVLRAKQDFKELT 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN +  +G   L + L E++  + +L L            L   +    SLREL L  
Sbjct: 172 VSNNDMGEAGVRVLCQGLAESACQLETLKLENCGLTPANCKDLCGIVASKASLRELDLGS 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL S   +L  L +    I+A G   +   ++  ++L  ++L  N +
Sbjct: 232 NKLGDVGIAELCPGLLSPSSQLKTLWLWECDITAGGCRDLCRVLRAKENLKELSLAGNAL 291

Query: 400 GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA+ + ++L + R  + ++ +   ++ +      + +L  N  +  L ++ N +G  
Sbjct: 292 GDEGAQLLCESLLEPRCQLESLWVKSCSLTAACCHHFSTMLTQNRHLLELQMSSNKLGDS 351

Query: 459 GAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G + L + L   G+ +  L LG C +  SG   +A +L  N ++  LDL  N L D G
Sbjct: 352 GVQELCQGLGQPGSTLRVLWLGDCDVSNSGCSSLASLLLANRSLRELDLSNNALGDPG 409



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 152/311 (48%), Gaps = 4/311 (1%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
            L    + + +   + +S    GD GL  L E L + Q   E++      +TAA      
Sbjct: 99  VLPSVLRSVHSLRELHLSDNPLGDVGLQLLCEGLLHPQCHLEKLQLEYCNLTAASCGPLA 158

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
            VL++    K L +S N +G+ GV+ LC  L ++A  +E L+L +  L     K +  ++
Sbjct: 159 AVLRAKQDFKELTVSNNDMGEAGVRVLCQGLAESACQLETLKLENCGLTPANCKDLCGIV 218

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN 329
            + + LR L+L +N +   G   L   LL  +S +++L L      A G   L + L   
Sbjct: 219 ASKASLRELDLGSNKLGDVGIAELCPGLLSPSSQLKTLWLWECDITAGGCRDLCRVLRAK 278

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           ++L+EL L GN++GDEG + L   L   + +L  L + + S++A    H +  +   + L
Sbjct: 279 ENLKELSLAGNALGDEGAQLLCESLLEPRCQLESLWVKSCSLTAACCHHFSTMLTQNRHL 338

Query: 390 LWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L + +  N +GD G +++   L Q   T+  + LG  ++ + G S++A +L  N  +  L
Sbjct: 339 LELQMSSNKLGDSGVQELCQGLGQPGSTLRVLWLGDCDVSNSGCSSLASLLLANRSLREL 398

Query: 449 DLAYNPIGADG 459
           DL+ N +G  G
Sbjct: 399 DLSNNALGDPG 409



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 170/378 (44%), Gaps = 6/378 (1%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDILVDNAGVERLQLSSVDLR 259
           G+T    +     LQ+N +L  L+L  N +GD GV   L  +      +++L L +  L 
Sbjct: 34  GLTEVRCRDISSALQANPSLTELSLRTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCCLT 93

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALG 318
           + G   +  +L++   LR L L++N +   G   L E LL     +  L L      A  
Sbjct: 94  EAGCGVLPSVLRSVHSLRELHLSDNPLGDVGLQLLCEGLLHPQCHLEKLQLEYCNLTAAS 153

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              LA  L   +  +EL +  N +G+ G+R L  GL+    +L  L + N  ++      
Sbjct: 154 CGPLAAVLRAKQDFKELTVSNNDMGEAGVRVLCQGLAESACQLETLKLENCGLTPANCKD 213

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           +   + +  SL  ++L  N +GD G AE     L  +  + T+ L   +I + G   + R
Sbjct: 214 LCGIVASKASLRELDLGSNKLGDVGIAELCPGLLSPSSQLKTLWLWECDITAGGCRDLCR 273

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           VL+    +  L LA N +G +GA+ L E +L+    + +L +  C + A+     + ML 
Sbjct: 274 VLRAKENLKELSLAGNALGDEGAQLLCESLLEPRCQLESLWVKSCSLTAACCHHFSTMLT 333

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            N  +  L + +N L D G + L Q        L  + L   ++ + G  ++A  L AN 
Sbjct: 334 QNRHLLELQMSSNKLGDSGVQELCQGLGQPGSTLRVLWLGDCDVSNSGCSSLASLLLANR 393

Query: 557 DVAVTSLNLANNFLTKFG 574
             ++  L+L+NN L   G
Sbjct: 394 --SLRELDLSNNALGDPG 409



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 120/288 (41%), Gaps = 11/288 (3%)

Query: 242 LVDNAGVERLQ---LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL 298
           L+    V RL    L+ V  RD     I+  L+ N  L  L L  N +  +G   + + L
Sbjct: 21  LIQQYAVVRLDDCGLTEVRCRD-----ISSALQANPSLTELSLRTNELGDAGVHLVLQGL 75

Query: 299 LENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
              +  I+ L L        G   L   L    SLRELHL  N +GD G++ L  GL   
Sbjct: 76  QSPTCKIQKLSLQNCCLTEAGCGVLPSVLRSVHSLRELHLSDNPLGDVGLQLLCEGLLHP 135

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT- 416
           +  L  L +   +++A     +A  ++  +    + +  ND+G+ G   +   L ++   
Sbjct: 136 QCHLEKLQLEYCNLTAASCGPLAAVLRAKQDFKELTVSNNDMGEAGVRVLCQGLAESACQ 195

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINT 475
           + T+ L    +       +  ++   + +  LDL  N +G  G   L   +L     + T
Sbjct: 196 LETLKLENCGLTPANCKDLCGIVASKASLRELDLGSNKLGDVGIAELCPGLLSPSSQLKT 255

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
           L L  C I A G   +  +LR    +  L L  N L DEGA+ L +S 
Sbjct: 256 LWLWECDITAGGCRDLCRVLRAKENLKELSLAGNALGDEGAQLLCESL 303


>gi|449502148|ref|XP_002198394.2| PREDICTED: ribonuclease inhibitor [Taeniopygia guttata]
          Length = 741

 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 116/491 (23%), Positives = 208/491 (42%), Gaps = 45/491 (9%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAAN 200
           +   L   S + L+         + + +   N  D G+  L ++L   ++  +E+     
Sbjct: 259 WDCDLTSASCKDLSRLISTKETLTEISLIDNNLRDSGMEMLCQALKDPKSKLQELWVREC 318

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLR 259
           G+T A  KA    L +N  LK L++  N +GD GV+ LC+ ++  N  ++ L L + +L 
Sbjct: 319 GLTTACCKAVSSALSTNKHLKVLHIGENKLGDAGVELLCEGLMHPNCNIQSLWLQNCNLT 378

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALG 318
               + +  +L     L  L + +N +  +G   L + ++  S  ++ L L      A  
Sbjct: 379 SACCETLRSVLSAQPSLTELHVGDNRLGTAGVKVLCQGMMNPSCKLQKLQLEYCELTADI 438

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             AL   L+   +L+EL L  N++GD  ++ L  GL      L +L + N  I++     
Sbjct: 439 VEALNAALQSKPTLKELSLSNNTLGDTAVKQLCQGLVEASCNLELLHLENCGITSDSCME 498

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEG-----------------------------AEKIAD 409
           ++  ++N  SL+ +++  N IGD G                              + ++ 
Sbjct: 499 ISAVLRNKSSLMDLSVGDNKIGDSGLALLCQGLMHPSCKIQKLWLWDCDLTSASCKDLSR 558

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKD-NSVITSLDLAYNPIGADGAKALSEVLK 468
            +    ++T I L  NN+   G   + + LKD  S +  L +    +     KA+S  L 
Sbjct: 559 LISTKESLTEISLIDNNLRDSGMEMLCQALKDPKSKLQELWVRECGLTTACCKAVSSALS 618

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDEGAKCLAQ--SFKV 525
            + ++  L +G  ++G +G E + + L + N  I  L L   G  D  A C A   +   
Sbjct: 619 TNKHLKVLHIGENKLGDAGVELLCEGLMHPNCNIQSLWL---GNCDLTAGCCATLATAMA 675

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
             + LT +DL++N + D+G   I +ALK        S N+    L     S+  D +   
Sbjct: 676 TKQCLTELDLSYNPLEDEGIRKICEALKK------PSCNVQQLILYDILWSSEVDDELRA 729

Query: 586 YEMSEKEVNIF 596
            E S+ EV I 
Sbjct: 730 LEESKPEVKII 740



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 97/449 (21%), Positives = 183/449 (40%), Gaps = 63/449 (14%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-I 241
           AE L   ++ + +      ++++  K    ++ +N  L  L L+ N +GD GV+ LC  +
Sbjct: 16  AELLTTMKSCKTIRLDDCNLSSSNCKDLSSIINTNPFLTELKLNNNELGDAGVEYLCKGL 75

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  +  +++L L + +L     + +  +L     L  L + +N +  +G   L + ++  
Sbjct: 76  LTPSCSLQKLWLQNCNLTSACCETLRSVLSAQPSLTELHVGDNRLGTAGVKVLCQGIMNP 135

Query: 302 ST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           S  ++ L L      A    AL   L+   +L+EL L  N++GD  ++ L  GL      
Sbjct: 136 SCKLQKLQLEYCELTADIVEALNAALQSKPTLKELSLSNNTLGDTAVKQLCQGLVEASCN 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG----------------- 403
           L +L + N  I+      ++  ++N  SL+ +++  N IGD G                 
Sbjct: 196 LELLHLENCGITRDSCMEISAVLRNKSSLMDLSVGDNKIGDSGLALLCQGLMHPSCKIQK 255

Query: 404 ------------AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD---------- 441
                        + ++  +    T+T I L  NN+   G   + + LKD          
Sbjct: 256 LWLWDCDLTSASCKDLSRLISTKETLTEISLIDNNLRDSGMEMLCQALKDPKSKLQELWV 315

Query: 442 -------------------NSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWC 481
                              N  +  L +  N +G  G + L E ++  + NI +L L  C
Sbjct: 316 RECGLTTACCKAVSSALSTNKHLKVLHIGENKLGDAGVELLCEGLMHPNCNIQSLWLQNC 375

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
            + ++  E +  +L    +++ L +  N L   G K L Q     +  L  + L + E+ 
Sbjct: 376 NLTSACCETLRSVLSAQPSLTELHVGDNRLGTAGVKVLCQGMMNPSCKLQKLQLEYCELT 435

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFL 570
            D   A+  AL++     +  L+L+NN L
Sbjct: 436 ADIVEALNAALQSKP--TLKELSLSNNTL 462



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 178/440 (40%), Gaps = 47/440 (10%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN-GITAAGI 207
           +SK TL E +          +S    GD  +  L + L       E+    N GIT    
Sbjct: 162 QSKPTLKELS----------LSNNTLGDTAVKQLCQGLVEASCNLELLHLENCGITRDSC 211

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAI 266
                VL++  +L  L++  N IGD G+  LC  ++  +  +++L L   DL     K +
Sbjct: 212 MEISAVLRNKSSLMDLSVGDNKIGDSGLALLCQGLMHPSCKIQKLWLWDCDLTSASCKDL 271

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKG 325
           + L+     L  + L +N +  SG   L +AL +  S ++ L +           A++  
Sbjct: 272 SRLISTKETLTEISLIDNNLRDSGMEMLCQALKDPKSKLQELWVRECGLTTACCKAVSSA 331

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLS----------------------------SR 357
           L  NK L+ LH+  N +GD G+  L  GL                             S 
Sbjct: 332 LSTNKHLKVLHIGENKLGDAGVELLCEGLMHPNCNIQSLWLQNCNLTSACCETLRSVLSA 391

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKN--CKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           +  L  L +G+N +   G   + + + N  CK L  + L   ++  +  E +  AL+   
Sbjct: 392 QPSLTELHVGDNRLGTAGVKVLCQGMMNPSCK-LQKLQLEYCELTADIVEALNAALQSKP 450

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           T+  + L  N +       + + L + S  +  L L    I +D    +S VL+   ++ 
Sbjct: 451 TLKELSLSNNTLGDTAVKQLCQGLVEASCNLELLHLENCGITSDSCMEISAVLRNKSSLM 510

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
            L +G  +IG SG   +   L + +  I  L L    L     K L++      E+LT I
Sbjct: 511 DLSVGDNKIGDSGLALLCQGLMHPSCKIQKLWLWDCDLTSASCKDLSRLIS-TKESLTEI 569

Query: 534 DLAFNEIRDDGAFAIAQALK 553
            L  N +RD G   + QALK
Sbjct: 570 SLIDNNLRDSGMEMLCQALK 589


>gi|307150010|ref|YP_003885394.1| leucine-rich repeat, ribonuclease inhibitor subtype [Cyanothece sp.
           PCC 7822]
 gi|306980238|gb|ADN12119.1| leucine-rich repeat, ribonuclease inhibitor subtype [Cyanothece sp.
           PCC 7822]
          Length = 388

 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 155/302 (51%), Gaps = 17/302 (5%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L    IG  G + + D+L  N  V  L L +  + D GA A+A+L+++NS L V+ L 
Sbjct: 55  LDLCKQGIGVTGCQQITDVLRANTTVISLLLGTDGIGDVGASAVAKLIQHNSHLEVVYLG 114

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G   LA AL  N+++  L L  N  G +GA  LA+ L  NKS+R L L    +
Sbjct: 115 CNQITKKGAAQLAAALSLNTSVTGLWLKRNPIGRIGAEYLAEMLSINKSIRTLDLVNTHL 174

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            + G+  ++  L  +   +  L +G N I  + A  ++  +K   ++ ++ L +N +GD 
Sbjct: 175 EETGLNRILDVLIDKNRTVERLYLGGNQIYDQAAKRLSMLLKTNPNIKYLFLNVNHLGDV 234

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA ++AD L+QN T+  + +  N I S G  AI   ++ +  + +LDL Y+P        
Sbjct: 235 GAIELADGLRQNSTLIELGVASNGITSTGGMAILEAIEGHPSLVNLDLGYSPS------- 287

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
            ++VL    N          +GA+GAE V  +L  ++ +  L+LR NG+ ++G   + + 
Sbjct: 288 -TQVLAARAN---------SLGAAGAERVGKLLANDSNLLRLNLRGNGITEQGKMAIIEG 337

Query: 523 FK 524
            +
Sbjct: 338 LE 339



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 13/296 (4%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+  +  G  G   + + L  N T   +    +GI   G  A   ++Q N  L+ + L 
Sbjct: 55  LDLCKQGIGVTGCQQITDVLRANTTVISLLLGTDGIGDVGASAVAKLIQHNSHLEVVYLG 114

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  +G   L   L  N  V  L L    +   GA+ +AE+L  N  +R L+L N  +
Sbjct: 115 CNQITKKGAAQLAAALSLNTSVTGLWLKRNPIGRIGAEYLAEMLSINKSIRTLDLVNTHL 174

Query: 287 DYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + +G   + + L++ N T+  L+L GN      A  L+  L+ N +++ L L+ N +GD 
Sbjct: 175 EETGLNRILDVLIDKNRTVERLYLGGNQIYDQAAKRLSMLLKTNPNIKYLFLNVNHLGDV 234

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL----------- 394
           G   L  GL  +   L  L + +N I++ G   + E I+   SL+ ++L           
Sbjct: 235 GAIELADGL-RQNSTLIELGVASNGITSTGGMAILEAIEGHPSLVNLDLGYSPSTQVLAA 293

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
             N +G  GAE++   L  +  +  ++L GN I  +G  AI   L+ N  +  L L
Sbjct: 294 RANSLGAAGAERVGKLLANDSNLLRLNLRGNGITEQGKMAIIEGLEKNYRLQHLIL 349



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 2/190 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L    IG  G ++I D L+ N T+ ++ LG + I   GASA+A++++ NS +  + L 
Sbjct: 55  LDLCKQGIGVTGCQQITDVLRANTTVISLLLGTDGIGDVGASAVAKLIQHNSHLEVVYLG 114

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I   GA  L+  L  + ++  L L    IG  GAE++A+ML  N +I  LDL    L
Sbjct: 115 CNQITKKGAAQLAAALSLNTSVTGLWLKRNPIGRIGAEYLAEMLSINKSIRTLDLVNTHL 174

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            + G   +       N  +  + L  N+I D  A  ++  LK N ++    LN+  N L 
Sbjct: 175 EETGLNRILDVLIDKNRTVERLYLGGNQIYDQAAKRLSMLLKTNPNIKYLFLNV--NHLG 232

Query: 572 KFGQSALTDA 581
             G   L D 
Sbjct: 233 DVGAIELADG 242



 Score = 42.4 bits (98), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 24/174 (13%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVD-------MSGRNFGDEGLFFLAESLGYNQTAEEVSF 197
           +L+    Q  ++ AK L      +       ++  + GD G   LA+ L  N T  E+  
Sbjct: 195 RLYLGGNQIYDQAAKRLSMLLKTNPNIKYLFLNVNHLGDVGAIELADGLRQNSTLIELGV 254

Query: 198 AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
           A+NGIT+ G  A    ++ + +L  L+L  +P                   + L   +  
Sbjct: 255 ASNGITSTGGMAILEAIEGHPSLVNLDLGYSP-----------------STQVLAARANS 297

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           L   GA+ + +LL N+S L  L L  N I   G  ++ E L +N  ++ L L+G
Sbjct: 298 LGAAGAERVGKLLANDSNLLRLNLRGNGITEQGKMAIIEGLEKNYRLQHLILDG 351


>gi|281201035|gb|EFA75249.1| hypothetical protein PPL_11324 [Polysphondylium pallidum PN500]
          Length = 811

 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 157/347 (45%), Gaps = 32/347 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  LN+ G   G  G     DIL  N  +  L +SS  L++     IA  ++ N  +  L
Sbjct: 290 LSYLNIGGINFGKIGFPNFLDILARNQDLTILDVSSNHLQESNGDEIANFIRLNESIHTL 349

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            +++N   Y    ++ EAL  N +I +L+++      L    LAK L  N  ++ L +  
Sbjct: 350 NISDNDF-YEATVAIGEALAANKSITNLNISNTKSSNLIGKVLAKTLSTNHCIKILDISH 408

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
             +G  GI     GLSS    L +L I +  +  KGA H+ E + +  +L  + +  N I
Sbjct: 409 TKLGHSGILDFAIGLSSNYITLEILSINDCDLQDKGAIHIGESLLSNVTLTQLYMNSNSI 468

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             EGA+ IA +LK+N T+ T+ LG N I  KG  ++   LK N  +  L +  N I   G
Sbjct: 469 EKEGAKAIAKSLKRNTTLKTLHLGNNQIGVKGIKSLGSALKSNRTLLDLSVKSNSIQEKG 528

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
              L+E LK                             NN++  L+LR N L ++    L
Sbjct: 529 GVNLAEYLK----------------------------SNNSLEYLNLRGNYLGNKAGNAL 560

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
            +     N+ L +ID++ N +  D    IA A K N+   +TS+N++
Sbjct: 561 IKLLG-QNQFLINIDVSHNPMDKDLTQRIASAQKKNQ--YITSMNIS 604



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 198/465 (42%), Gaps = 77/465 (16%)

Query: 162 RAFSSVDMSGRNFGDEGLF-FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           +  + +D+S    G EGL   +++ +  N++ + ++ + N +      +  G L  N  +
Sbjct: 70  QTIAKLDLSHNYLGPEGLSPIISDVIRSNKSIQWLNLSHNTLDQDENHSILGALLHNQTI 129

Query: 221 KTLNLSGNP--IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG---AKAIAELLKNNSI 275
             L+LS N   +  +  K LC  +  +  +E L  S    R+     +KAIA     N+ 
Sbjct: 130 SHLDLSSNEYQLSSDVSKYLCKYIEQSLSLESLNFSKNSTRNPLCGLSKAIAT----NTT 185

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL--------NGN-YGGALGAN------ 320
           L+ ++LN+ +I       L E+L  + TI S++L        N N YG  +  N      
Sbjct: 186 LKSIDLNSMIISDQDSEQLIESLFNSKTISSINLDQCILSSSNQNCYGNIISHNLAVRYN 245

Query: 321 -------------ALAKGLEGN--------------------KSLRELHLHGNSIGDEGI 347
                        A+ +  E N                      L  L++ G + G  G 
Sbjct: 246 ELDLIDEASKYNKAMTQEEEMNMLIDQLSNKQEEISMKCLDFTPLSYLNIGGINFGKIGF 305

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
              +  L+ R   L +LD+ +N +       +A +I+  +S+  +N+  ND   E    I
Sbjct: 306 PNFLDILA-RNQDLTILDVSSNHLQESNGDEIANFIRLNESIHTLNISDNDFY-EATVAI 363

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            +AL  N++IT +++      +     +A+ L  N  I  LD+++  +G  G      +L
Sbjct: 364 GEALAANKSITNLNISNTKSSNLIGKVLAKTLSTNHCIKILDISHTKLGHSG------IL 417

Query: 468 KF-------HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
            F       +  +  L +  C +   GA  + + L  N T++ L + +N +  EGAK +A
Sbjct: 418 DFAIGLSSNYITLEILSINDCDLQDKGAIHIGESLLSNVTLTQLYMNSNSIEKEGAKAIA 477

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE---DVAVTS 562
           +S K  N  L ++ L  N+I   G  ++  ALK+N    D++V S
Sbjct: 478 KSLKR-NTTLKTLHLGNNQIGVKGIKSLGSALKSNRTLLDLSVKS 521



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 30/249 (12%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSN-IALKTLNLSGNPIGDEGVKCLCD 240
           LA++L  N   + +  +   +  +GI  F   L SN I L+ L+++   + D+G   + +
Sbjct: 391 LAKTLSTNHCIKILDISHTKLGHSGILDFAIGLSSNYITLEILSINDCDLQDKGAIHIGE 450

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L+ N  + +L ++S  +  EGAKAIA+ LK N+ L+ L L NN I   G  SL  AL  
Sbjct: 451 SLLSNVTLTQLYMNSNSIEKEGAKAIAKSLKRNTTLKTLHLGNNQIGVKGIKSLGSALKS 510

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N T+  L +  N     G   LA+ L+ N SL  L+L GN +G++   AL+        K
Sbjct: 511 NRTLLDLSVKSNSIQEKGGVNLAEYLKSNNSLEYLNLRGNYLGNKAGNALI--------K 562

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L    +G N                   L+ I++  N +  +  ++IA A K+N+ IT++
Sbjct: 563 L----LGQNQF-----------------LINIDVSHNPMDKDLTQRIASAQKKNQYITSM 601

Query: 421 DLGGNNIHS 429
           ++    + S
Sbjct: 602 NISQTEMES 610



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 96/429 (22%), Positives = 191/429 (44%), Gaps = 54/429 (12%)

Query: 190 QTAEEVSFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           QT  ++  + N +   G+      V++SN +++ LNLS N +  +    +   L+ N  +
Sbjct: 70  QTIAKLDLSHNYLGPEGLSPIISDVIRSNKSIQWLNLSHNTLDQDENHSILGALLHNQTI 129

Query: 249 ERLQLSS--VDLRDEGAKAIAELLKN---------------------------NSILRVL 279
             L LSS    L  + +K + + ++                            N+ L+ +
Sbjct: 130 SHLDLSSNEYQLSSDVSKYLCKYIEQSLSLESLNFSKNSTRNPLCGLSKAIATNTTLKSI 189

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR--ELHL 337
           +LN+ +I       L E+L  + TI S++L+     +   N     +  N ++R  EL L
Sbjct: 190 DLNSMIISDQDSEQLIESLFNSKTISSINLDQCILSSSNQNCYGNIISHNLAVRYNELDL 249

Query: 338 HGNS-------IGDEGIRALMSGLSSRKGK----------LAVLDIGNNSISAKGAFHVA 380
              +         +E +  L+  LS+++ +          L+ L+IG  +    G  +  
Sbjct: 250 IDEASKYNKAMTQEEEMNMLIDQLSNKQEEISMKCLDFTPLSYLNIGGINFGKIGFPNFL 309

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +   + L  +++  N + +   ++IA+ ++ N +I T+++  N+ + +   AI   L 
Sbjct: 310 DILARNQDLTILDVSSNHLQESNGDEIANFIRLNESIHTLNISDNDFY-EATVAIGEALA 368

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA-EFVADMLRYNN 499
            N  IT+L+++         K L++ L  +  I  L +   ++G SG  +F   +     
Sbjct: 369 ANKSITNLNISNTKSSNLIGKVLAKTLSTNHCIKILDISHTKLGHSGILDFAIGLSSNYI 428

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
           T+ IL +    L+D+GA  + +S  + N  LT + +  N I  +GA AIA++LK N    
Sbjct: 429 TLEILSINDCDLQDKGAIHIGESL-LSNVTLTQLYMNSNSIEKEGAKAIAKSLKRN--TT 485

Query: 560 VTSLNLANN 568
           + +L+L NN
Sbjct: 486 LKTLHLGNN 494



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 38/213 (17%)

Query: 338 HGNSIGD-EGIRALMSGLSSRKGKLAVLDIGNNSISAKG-AFHVAEYIKNCKSLLWINLY 395
           H  SI D +   A  S L      +A LD+ +N +  +G +  +++ I++ KS+ W+NL 
Sbjct: 48  HNKSIKDLDAWIAFGSALKLPTQTIAKLDLSHNYLGPEGLSPIISDVIRSNKSIQWLNLS 107

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIH------------------------SKG 431
            N +  +    I  AL  N+TI+ +DL  N                           SK 
Sbjct: 108 HNTLDQDENHSILGALLHNQTISHLDLSSNEYQLSSDVSKYLCKYIEQSLSLESLNFSKN 167

Query: 432 AS-----AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           ++      +++ +  N+ + S+DL    I    ++ L E L     I+++ L  C + +S
Sbjct: 168 STRNPLCGLSKAIATNTTLKSIDLNSMIISDQDSEQLIESLFNSKTISSINLDQCILSSS 227

Query: 487 GAEFVADMLRYNNTISILDLRANGLR--DEGAK 517
                 +++ +N     L +R N L   DE +K
Sbjct: 228 NQNCYGNIISHN-----LAVRYNELDLIDEASK 255


>gi|417401274|gb|JAA47528.1| Putative ribonuclease inhibitor [Desmodus rotundus]
          Length = 456

 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 160/350 (45%), Gaps = 18/350 (5%)

Query: 134 AGTNL-LSGFTGKLFRESKQTLNE----------FAKELRAFSSV---DMSGRNFGDEGL 179
           AGT+L L G      +  K +L             A  LRA  S+   D+S    GD GL
Sbjct: 66  AGTHLVLQGLQSPTCKVQKLSLQSCCLTEASGRALASTLRAIPSLRELDLSYNPLGDAGL 125

Query: 180 FFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCL 238
             L E L   Q   E +      ++AA  +    VL++   LK L L+ N  G+ G + L
Sbjct: 126 QLLCEGLLDPQCHIESLELQYCSLSAASCQPLAAVLRARPELKELVLNSNDFGEAGTRTL 185

Query: 239 CDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           C  LVD+A  +E L+L S  L     + +  +L   + LR LEL +N +   G  +L   
Sbjct: 186 CQALVDSACLLESLKLESCGLTSANCQDLCGVLAAKASLRDLELGDNRLGDVGVAALCPG 245

Query: 298 LLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           LL     +++L L      A G   L + L   +SLRE  + GN++GDEG+R L   L  
Sbjct: 246 LLSPGCQLKTLWLWECDITAGGCRDLCRVLRAKESLREFSIAGNAVGDEGVRLLCESLLE 305

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NR 415
              +L  L + + S++A    H++  +   +SL  + L  N + D G  ++   L Q   
Sbjct: 306 PCCRLESLWVKSCSLTAACCPHISAMLAQNRSLQELQLSNNKLEDAGVGELCRGLGQPGV 365

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            + T+ LG   +  KG S +A +L  +  +  LDL+ N +   G   L+E
Sbjct: 366 PLRTLWLGDCEVTDKGCSNLASLLLASRSLQELDLSNNCMSEVGILELAE 415



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 188/395 (47%), Gaps = 8/395 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + +++     GD G   + + L       +++S  +  +T A  +A    L++  +L+ 
Sbjct: 53  LTELNLCSNELGDAGTHLVLQGLQSPTCKVQKLSLQSCCLTEASGRALASTLRAIPSLRE 112

Query: 223 LNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+LS NP+GD G++ LC+ L+D    +E L+L    L     + +A +L+    L+ L L
Sbjct: 113 LDLSYNPLGDAGLQLLCEGLLDPQCHIESLELQYCSLSAASCQPLAAVLRARPELKELVL 172

Query: 282 NNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           N+N    +G  +L +AL++++  + SL L      +     L   L    SLR+L L  N
Sbjct: 173 NSNDFGEAGTRTLCQALVDSACLLESLKLESCGLTSANCQDLCGVLAAKASLRDLELGDN 232

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD G+ AL  GL S   +L  L +    I+A G   +   ++  +SL   ++  N +G
Sbjct: 233 RLGDVGVAALCPGLLSPGCQLKTLWLWECDITAGGCRDLCRVLRAKESLREFSIAGNAVG 292

Query: 401 DEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           DEG   + ++L +    + ++ +   ++ +     I+ +L  N  +  L L+ N +   G
Sbjct: 293 DEGVRLLCESLLEPCCRLESLWVKSCSLTAACCPHISAMLAQNRSLQELQLSNNKLEDAG 352

Query: 460 AKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
              L   L   G  + TL LG C++   G   +A +L  + ++  LDL  N + + G   
Sbjct: 353 VGELCRGLGQPGVPLRTLWLGDCEVTDKGCSNLASLLLASRSLQELDLSNNCMSEVGILE 412

Query: 519 LAQSFK---VVNEALTSIDLAFNEIRDDGAFAIAQ 550
           LA+S +    V E L   D+ + E  +D   A+A+
Sbjct: 413 LAESAQQPSCVLEKLILYDIYWTEETEDRLQALAE 447



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 173/413 (41%), Gaps = 9/413 (2%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+DM      D       E L   Q  + +     GIT    +     L+ N  L  LNL
Sbjct: 2   SLDMHYEQLSD---TRWTELLPRMQQCQVIRLVDCGITEGRCQDVSSALRDNPTLTELNL 58

Query: 226 SGNPIGDEGVK-CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD G    L  +      V++L L S  L +   +A+A  L+    LR L+L+ N
Sbjct: 59  CSNELGDAGTHLVLQGLQSPTCKVQKLSLQSCCLTEASGRALASTLRAIPSLRELDLSYN 118

Query: 285 MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +  +G   L E LL+    I SL L      A     LA  L     L+EL L+ N  G
Sbjct: 119 PLGDAGLQLLCEGLLDPQCHIESLELQYCSLSAASCQPLAAVLRARPELKELVLNSNDFG 178

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G R L   L      L  L + +  +++     +   +    SL  + L  N +GD G
Sbjct: 179 EAGTRTLCQALVDSACLLESLKLESCGLTSANCQDLCGVLAAKASLRDLELGDNRLGDVG 238

Query: 404 AEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              +   L      + T+ L   +I + G   + RVL+    +    +A N +G +G + 
Sbjct: 239 VAALCPGLLSPGCQLKTLWLWECDITAGGCRDLCRVLRAKESLREFSIAGNAVGDEGVRL 298

Query: 463 LSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           L E +L+    + +L +  C + A+    ++ ML  N ++  L L  N L D G   L +
Sbjct: 299 LCESLLEPCCRLESLWVKSCSLTAACCPHISAMLAQNRSLQELQLSNNKLEDAGVGELCR 358

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
                   L ++ L   E+ D G   +A  L A+   ++  L+L+NN +++ G
Sbjct: 359 GLGQPGVPLRTLWLGDCEVTDKGCSNLASLLLASR--SLQELDLSNNCMSEVG 409


>gi|51850107|dbj|BAD42395.1| leucine-rich repeat protein [Ralstonia solanacearum]
          Length = 538

 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 207/437 (47%), Gaps = 80/437 (18%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + ++G  F D+ L  L  SL     A ++S     ITAAGI        S + L  
Sbjct: 124 ALEKLTLAG-TFTDDDLRGLPASL----KALDLSRCRGPITAAGIAHL-----SRLPLVR 173

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+    IG EG +    +L ++  +  L +S+  +  EGA+A+A     N+ L  L ++
Sbjct: 174 LNVRNKRIGAEGAR----LLANHPTLTSLNVSNGRIGPEGAQALAA----NTRLTTLNVS 225

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK--------------GLEG 328
            N I  +G    A+AL  N T+RSL ++ N  G  GA  LA               G++G
Sbjct: 226 GNRIGVAG----AKALAANQTLRSLDVSDNRIGDEGARELAACTQLTTLDANRNGIGVDG 281

Query: 329 ------NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
                 +++L  L + GN IGD G+ AL +       +L  L++ +  + A G   +A  
Sbjct: 282 ATALAASRTLTSLAIGGNEIGDAGVLALAA-----NARLTTLNVESTGVGADGVKALAAS 336

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
               K+L W+ L  NDIG+ GA     AL  + ++TT+ L  + I ++GA A+A     N
Sbjct: 337 ----KTLTWLRLDGNDIGNAGAT----ALAASTSLTTLHLEHSRIGAEGAQALA----AN 384

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM-LRYNNTI 501
           + +T+LDL YN IG  G + LS             L W  +  +  E  + + L    T+
Sbjct: 385 TKLTTLDLGYNDIGDAGVRTLSA---------NATLVWLSVRRNNLEDASAVSLAAGKTL 435

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + LD+  NG++D+GAK LA      N  LT++D++ N+I        A A     +  + 
Sbjct: 436 TTLDISGNGIQDQGAKALA-----ANPTLTTLDVSSNDI------RNAGARALAANARLV 484

Query: 562 SLNLANNFLTKFGQSAL 578
           SL+L NN + + G  AL
Sbjct: 485 SLDLRNNRMEESGTRAL 501


>gi|320166233|gb|EFW43132.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 419

 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 110/204 (53%), Gaps = 29/204 (14%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+   + DE AKAIAE LK N  ++ L L  N I  +G  ++AEAL  N+T+  L+L  N
Sbjct: 6   LAERQIGDEEAKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRN 65

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G  GA A+A+ L+ N +L E  L GN IGD G +A                       
Sbjct: 66  QIGNAGAQAIAEALKVNTTLSEFDLWGNQIGDVGAQA----------------------- 102

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
                 +AE +K    L+ ++L  N IGD GA+ IA+ALK N+T+TT+ L  N I  +GA
Sbjct: 103 ------IAEALKVNTKLIELSLSQNQIGDAGAQTIAEALKVNKTLTTLSLHKNQIGDEGA 156

Query: 433 SAIARVLKDNSVITSLDLAYNPIG 456
            AIA  L+DN +++SL L  N IG
Sbjct: 157 RAIAEALQDNKILSSLYLNENQIG 180



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 109/180 (60%), Gaps = 3/180 (1%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGDE A+ IA+ALK N+ +  + L  N I   GA AIA  LK N+ +T L L  N IG  
Sbjct: 11  IGDEEAKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRNQIGNA 70

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA+A++E LK +  ++   L   QIG  GA+ +A+ L+ N  +  L L  N + D GA+ 
Sbjct: 71  GAQAIAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGDAGAQT 130

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           +A++ K VN+ LT++ L  N+I D+GA AIA+AL+ N+   ++SL L  N +  + + AL
Sbjct: 131 IAEALK-VNKTLTTLSLHKNQIGDEGARAIAEALQDNK--ILSSLYLNENQIGYYVEIAL 187



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 106/175 (60%), Gaps = 1/175 (0%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +    I  + A  +AE +K  K++  + L+ N IGD GA+ IA+ALK N T+T + L  N
Sbjct: 6   LAERQIGDEEAKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRN 65

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I + GA AIA  LK N+ ++  DL  N IG  GA+A++E LK +  +  L L   QIG 
Sbjct: 66  QIGNAGAQAIAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGD 125

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
           +GA+ +A+ L+ N T++ L L  N + DEGA+ +A++ +  N+ L+S+ L  N+I
Sbjct: 126 AGAQTIAEALKVNKTLTTLSLHKNQIGDEGARAIAEALQ-DNKILSSLYLNENQI 179



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 1/166 (0%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A A+A+ L+ NK+++ L L  N IGD G +A+   L      +  L +  N I   GA  
Sbjct: 16  AKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNT-TMTHLYLQRNQIGNAGAQA 74

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +K   +L   +L+ N IGD GA+ IA+ALK N  +  + L  N I   GA  IA  
Sbjct: 75  IAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGDAGAQTIAEA 134

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           LK N  +T+L L  N IG +GA+A++E L+ +  +++L L   QIG
Sbjct: 135 LKVNKTLTTLSLHKNQIGDEGARAIAEALQDNKILSSLYLNENQIG 180



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 93/175 (53%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++ R  GDE    +AE+L  N+  + +    N I  AG +A    L+ N  +  L L  N
Sbjct: 6   LAERQIGDEEAKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRN 65

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG+ G + + + L  N  +    L    + D GA+AIAE LK N+ L  L L+ N I  
Sbjct: 66  QIGNAGAQAIAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGD 125

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           +G  ++AEAL  N T+ +L L+ N  G  GA A+A+ L+ NK L  L+L+ N IG
Sbjct: 126 AGAQTIAEALKVNKTLTTLSLHKNQIGDEGARAIAEALQDNKILSSLYLNENQIG 180



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 84/163 (51%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S A   I     KA    L+ N A+K L L  N IGD G + + + L  N  +  L L  
Sbjct: 5   SLAERQIGDEEAKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQR 64

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + + GA+AIAE LK N+ L   +L  N I   G  ++AEAL  N+ +  L L+ N  G
Sbjct: 65  NQIGNAGAQAIAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIG 124

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
             GA  +A+ L+ NK+L  L LH N IGDEG RA+   L   K
Sbjct: 125 DAGAQTIAEALKVNKTLTTLSLHKNQIGDEGARAIAEALQDNK 167



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 81/167 (48%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + + E  K  +A   + +     GD G   +AE+L  N T   +    N I  AG +
Sbjct: 14  EEAKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRNQIGNAGAQ 73

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L+ N  L   +L GN IGD G + + + L  N  +  L LS   + D GA+ IAE
Sbjct: 74  AIAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGDAGAQTIAE 133

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            LK N  L  L L+ N I   G  ++AEAL +N  + SL+LN N  G
Sbjct: 134 ALKVNKTLTTLSLHKNQIGDEGARAIAEALQDNKILSSLYLNENQIG 180



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 66/137 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + + +     G+ G   +AE+L  N T  E     N I   G +A  
Sbjct: 45  QAIAEALKVNTTMTHLYLQRNQIGNAGAQAIAEALKVNTTLSEFDLWGNQIGDVGAQAIA 104

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  L+LS N IGD G + + + L  N  +  L L    + DEGA+AIAE L+
Sbjct: 105 EALKVNTKLIELSLSQNQIGDAGAQTIAEALKVNKTLTTLSLHKNQIGDEGARAIAEALQ 164

Query: 272 NNSILRVLELNNNMIDY 288
           +N IL  L LN N I Y
Sbjct: 165 DNKILSSLYLNENQIGY 181


>gi|320169568|gb|EFW46467.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 428

 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 124/220 (56%), Gaps = 7/220 (3%)

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++AEAL  N+   SL L  +  G +GA A+ + L+ N +L +++L+GN IGD G++ 
Sbjct: 14  GALAVAEALKVNAAAVSLFLGNSQIGDVGAIAMGEALKVNATLTQVYLNGNQIGDAGVQC 73

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY--MND----IGDEG 403
           +   L     KL  LD+  N I   GA  VAE +K   +L   + +  + D    IGD G
Sbjct: 74  IAEALKVNT-KLVSLDLRRNQIGDDGAKAVAEALKVNATLETASHFDTLTDVGEQIGDAG 132

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+ IA++LK NRT+TT  L  N I   GA AIA  L+ N  ++ + L +N IG  GA+A+
Sbjct: 133 AQAIAESLKLNRTLTTPGLETNQIGDAGAQAIAEALQVNKTLSYVHLQFNQIGDIGAQAI 192

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           +E LK +  +  + L +  IG  GA+ + +  + N+TI +
Sbjct: 193 AEALKVNKTLFFINLRYNCIGTVGAQAIDEARKVNSTIDV 232



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 117/220 (53%), Gaps = 7/220 (3%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA A+AE LK N+    L L N+ I   G  ++ EAL  N+T+  ++LNGN  G  G   
Sbjct: 14  GALAVAEALKVNAAAVSLFLGNSQIGDVGAIAMGEALKVNATLTQVYLNGNQIGDAGVQC 73

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSG------LSSRKGKLAVLDIGNNSISAKG 375
           +A+ L+ N  L  L L  N IGD+G +A+         L +      + D+G   I   G
Sbjct: 74  IAEALKVNTKLVSLDLRRNQIGDDGAKAVAEALKVNATLETASHFDTLTDVGEQ-IGDAG 132

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A  +AE +K  ++L    L  N IGD GA+ IA+AL+ N+T++ + L  N I   GA AI
Sbjct: 133 AQAIAESLKLNRTLTTPGLETNQIGDAGAQAIAEALQVNKTLSYVHLQFNQIGDIGAQAI 192

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
           A  LK N  +  ++L YN IG  GA+A+ E  K +  I+ 
Sbjct: 193 AEALKVNKTLFFINLRYNCIGTVGAQAIDEARKVNSTIDV 232



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 35/252 (13%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           R  G+ G   +AE+L  N  A  +    + I   G  A    L+ N  L  + L+GN IG
Sbjct: 8   REVGEIGALAVAEALKVNAAAVSLFLGNSQIGDVGAIAMGEALKVNATLTQVYLNGNQIG 67

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY--- 288
           D GV+C+ + L  N  +  L L    + D+GAKA+AE LK N+ L      + + D    
Sbjct: 68  DAGVQCIAEALKVNTKLVSLDLRRNQIGDDGAKAVAEALKVNATLETASHFDTLTDVGEQ 127

Query: 289 ---SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
              +G  ++AE+L  N T+ +  L  N  G  GA A+A+ L+ NK+L  +HL  N IGD 
Sbjct: 128 IGDAGAQAIAESLKLNRTLTTPGLETNQIGDAGAQAIAEALQVNKTLSYVHLQFNQIGDI 187

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G +A                             +AE +K  K+L +INL  N IG  GA+
Sbjct: 188 GAQA-----------------------------IAEALKVNKTLFFINLRYNCIGTVGAQ 218

Query: 406 KIADALKQNRTI 417
            I +A K N TI
Sbjct: 219 AIDEARKVNSTI 230



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 107/196 (54%), Gaps = 11/196 (5%)

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L   ++G+ GA  +A+ALK N    ++ LG + I   GA A+   LK N+ +T + L  
Sbjct: 4   SLERREVGEIGALAVAEALKVNAAAVSLFLGNSQIGDVGAIAMGEALKVNATLTQVYLNG 63

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI-------SILD 505
           N IG  G + ++E LK +  + +L L   QIG  GA+ VA+ L+ N T+       ++ D
Sbjct: 64  NQIGDAGVQCIAEALKVNTKLVSLDLRRNQIGDDGAKAVAEALKVNATLETASHFDTLTD 123

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           +    + D GA+ +A+S K +N  LT+  L  N+I D GA AIA+AL+ N+ ++   L  
Sbjct: 124 V-GEQIGDAGAQAIAESLK-LNRTLTTPGLETNQIGDAGAQAIAEALQVNKTLSYVHLQF 181

Query: 566 ANNFLTKFGQSALTDA 581
             N +   G  A+ +A
Sbjct: 182 --NQIGDIGAQAIAEA 195



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 6/175 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT- 222
            + V ++G   GD G+  +AE+L  N     +    N I   G KA    L+ N  L+T 
Sbjct: 56  LTQVYLNGNQIGDAGVQCIAEALKVNTKLVSLDLRRNQIGDDGAKAVAEALKVNATLETA 115

Query: 223 -----LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
                L   G  IGD G + + + L  N  +    L +  + D GA+AIAE L+ N  L 
Sbjct: 116 SHFDTLTDVGEQIGDAGAQAIAESLKLNRTLTTPGLETNQIGDAGAQAIAEALQVNKTLS 175

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            + L  N I   G  ++AEAL  N T+  ++L  N  G +GA A+ +  + N ++
Sbjct: 176 YVHLQFNQIGDIGAQAIAEALKVNKTLFFINLRYNCIGTVGAQAIDEARKVNSTI 230



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 71/159 (44%), Gaps = 6/159 (3%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF------AANGITAA 205
           Q + E  K      S+D+     GD+G   +AE+L  N T E  S           I  A
Sbjct: 72  QCIAEALKVNTKLVSLDLRRNQIGDDGAKAVAEALKVNATLETASHFDTLTDVGEQIGDA 131

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G +A    L+ N  L T  L  N IGD G + + + L  N  +  + L    + D GA+A
Sbjct: 132 GAQAIAESLKLNRTLTTPGLETNQIGDAGAQAIAEALQVNKTLSYVHLQFNQIGDIGAQA 191

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           IAE LK N  L  + L  N I   G  ++ EA   NSTI
Sbjct: 192 IAEALKVNKTLFFINLRYNCIGTVGAQAIDEARKVNSTI 230


>gi|326428860|gb|EGD74430.1| hypothetical protein PTSG_12362 [Salpingoeca sp. ATCC 50818]
          Length = 647

 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 105/168 (62%), Gaps = 4/168 (2%)

Query: 390 LWINLYMND--IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           +W N  ++D  +GD GA  +A+ALK N  + T+ L  N+I  +GA A+A +LK N+ +  
Sbjct: 5   IW-NYSLDDDGLGDIGARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLEI 63

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L+L  NPIG +GA AL+E+LK +  +  L+L    IG  GA  +A+ML++N T+++L L 
Sbjct: 64  LNLDNNPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLS 123

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            N + D+GA  LA+  K  N  LT + L  N I D+GA A+A+ LK N
Sbjct: 124 NNSIGDKGAVALAEMLK-HNTTLTWLGLQINPISDEGAVALAEMLKHN 170



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 103/175 (58%), Gaps = 1/175 (0%)

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           TI +  L+ +  G +GA A+A+ L+ N  L+ L L  NSIG EG  AL   L      L 
Sbjct: 4   TIWNYSLDDDGLGDIGARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLK-HNTTLE 62

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           +L++ NN I  +GA  +AE +K+  +L  + L  N IG EGA  +A+ LK N T+T + L
Sbjct: 63  ILNLDNNPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGL 122

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
             N+I  KGA A+A +LK N+ +T L L  NPI  +GA AL+E+LK +  +  L+
Sbjct: 123 SNNSIGDKGAVALAEMLKHNTTLTWLGLQINPISDEGAVALAEMLKHNTALEELR 177



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 91/150 (60%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  VAE +K+   L  + L+ N IG EGA  +A+ LK N T+  ++L  N I  +GA A
Sbjct: 19  GARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLEILNLDNNPIGDEGAVA 78

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A +LK N+ +  L L+ N IG +GA AL+E+LK +  +  L L    IG  GA  +A+M
Sbjct: 79  LAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLSNNSIGDKGAVALAEM 138

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           L++N T++ L L+ N + DEGA  LA+  K
Sbjct: 139 LKHNTTLTWLGLQINPISDEGAVALAEMLK 168



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 95/170 (55%), Gaps = 2/170 (1%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D  G   GD G   +AE+L  N   + +   AN I   G  A   +L+ N  L+ LNL
Sbjct: 9   SLDDDG--LGDIGARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLEILNL 66

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             NPIGDEG   L ++L  N  +E L+LS   +  EGA A+AE+LK+N+ L VL L+NN 
Sbjct: 67  DNNPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLSNNS 126

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           I   G  +LAE L  N+T+  L L  N     GA ALA+ L+ N +L EL
Sbjct: 127 IGDKGAVALAEMLKHNTTLTWLGLQINPISDEGAVALAEMLKHNTALEEL 176



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 99/191 (51%), Gaps = 29/191 (15%)

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  + +GD G + + + L DN  ++ L L +  +  EGA A+AE+LK+N+ L +L L+N
Sbjct: 9   SLDDDGLGDIGARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLEILNLDN 68

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  +LAE L  N+ +  L L+ N  G  GA ALA+ L+ N +L  L L  NSIG
Sbjct: 69  NPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLSNNSIG 128

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D                             KGA  +AE +K+  +L W+ L +N I DEG
Sbjct: 129 D-----------------------------KGAVALAEMLKHNTTLTWLGLQINPISDEG 159

Query: 404 AEKIADALKQN 414
           A  +A+ LK N
Sbjct: 160 AVALAEMLKHN 170



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 86/155 (55%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S   +G+   G +A    L+ N  LKTL L  N IG EG   L ++L  N  +E L L +
Sbjct: 9   SLDDDGLGDIGARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLEILNLDN 68

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + DEGA A+AE+LK+N+ L  L L+ N I   G  +LAE L  N+T+  L L+ N  G
Sbjct: 69  NPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLSNNSIG 128

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             GA ALA+ L+ N +L  L L  N I DEG  AL
Sbjct: 129 DKGAVALAEMLKHNTTLTWLGLQINPISDEGAVAL 163



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 89/166 (53%), Gaps = 3/166 (1%)

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
            TI    L  + +   GA A+A  LKDN+ + +L L  N IG +GA AL+E+LK +  + 
Sbjct: 3   HTIWNYSLDDDGLGDIGARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLE 62

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
            L L    IG  GA  +A+ML++N  +  L L  N +  EGA  LA+  K  N  LT + 
Sbjct: 63  ILNLDNNPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLK-HNTTLTVLG 121

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           L+ N I D GA A+A+ LK N    +T L L  N ++  G  AL +
Sbjct: 122 LSNNSIGDKGAVALAEMLKHN--TTLTWLGLQINPISDEGAVALAE 165



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 63/126 (50%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K       +++     GDEG   LAE L +N   EE+  + N I   G  A   +
Sbjct: 51  LAEMLKHNTTLEILNLDNNPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEM 110

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L  L LS N IGD+G   L ++L  N  +  L L    + DEGA A+AE+LK+N
Sbjct: 111 LKHNTTLTVLGLSNNSIGDKGAVALAEMLKHNTTLTWLGLQINPISDEGAVALAEMLKHN 170

Query: 274 SILRVL 279
           + L  L
Sbjct: 171 TALEEL 176



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 46/99 (46%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K   A   + +S  + G EG   LAE L +N T   +  + N I   G  A   +
Sbjct: 79  LAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLSNNSIGDKGAVALAEM 138

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           L+ N  L  L L  NPI DEG   L ++L  N  +E L+
Sbjct: 139 LKHNTTLTWLGLQINPISDEGAVALAEMLKHNTALEELR 177


>gi|403305733|ref|XP_003945254.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease inhibitor [Saimiri
           boliviensis boliviensis]
          Length = 624

 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 155/315 (49%), Gaps = 4/315 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + + +     GD G+  + ++L  +    +++SF +  +T AG     G L+S   L+
Sbjct: 305 ALTELSLRNNEVGDAGVRRVLQALQSSPCKIQKLSFQSCYLTVAGCGVLSGTLRSLPTLQ 364

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+GD G++ LC+ L+D    +E+LQL    L   G + +A +L+     + L 
Sbjct: 365 ELHLSDNPMGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSSAGCEPLASVLRAKPDFKELT 424

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN ID +G  +L + L ++   + +L L      +     L   L    SL+EL L  
Sbjct: 425 VSNNDIDETGVRALCQGLKDSPCQLETLKLEKCGVTSDNCRDLCSILASKASLQELALGN 484

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL     +L  L I    ++AK    +   ++   SL  ++L  N++
Sbjct: 485 NKLGDVGITELCPGLLHPSSRLRTLWIWECGLTAKSCVDLCRVLRAKDSLKELSLAGNEL 544

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA+ + ++ L+    + ++ +   ++ +   S  + VL  N  +  L ++ N +G  
Sbjct: 545 GDEGAQLLCESLLEPGCQLESLWVKSCSLTAACCSHFSSVLAKNKFLLELQISENRLGDA 604

Query: 459 GAKALSEVLKFHGNI 473
           G + L   L   G++
Sbjct: 605 GVQELCRGLGQPGSV 619



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 157/374 (41%), Gaps = 7/374 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              VD+      D      AE L      + V     G++ A  +     LQ+N AL  L
Sbjct: 253 MQCVDIQCEELSDA---RWAELLPLLPRCQAVRLDDCGLSEAQCEDVGSALQANSALTEL 309

Query: 224 NLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           +L  N +GD GV+ +   L  +   +++L   S  L   G   ++  L++   L+ L L+
Sbjct: 310 SLRNNEVGDAGVRRVLQALQSSPCKIQKLSFQSCYLTVAGCGVLSGTLRSLPTLQELHLS 369

Query: 283 NNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N +  +G   L E LL+    +  L L      + G   LA  L      +EL +  N 
Sbjct: 370 DNPMGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSSAGCEPLASVLRAKPDFKELTVSNND 429

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+RAL  GL     +L  L +    +++     +   + +  SL  + L  N +GD
Sbjct: 430 IDETGVRALCQGLKDSPCQLETLKLEKCGVTSDNCRDLCSILASKASLQELALGNNKLGD 489

Query: 402 EGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G  ++    L  +  + T+ +    + +K    + RVL+    +  L LA N +G +GA
Sbjct: 490 VGITELCPGLLHPSSRLRTLWIWECGLTAKSCVDLCRVLRAKDSLKELSLAGNELGDEGA 549

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           + L E L   G  + +L +  C + A+     + +L  N  +  L +  N L D G + L
Sbjct: 550 QLLCESLLEPGCQLESLWVKSCSLTAACCSHFSSVLAKNKFLLELQISENRLGDAGVQEL 609

Query: 520 AQSFKVVNEALTSI 533
            +        L S+
Sbjct: 610 CRGLGQPGSVLRSL 623



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 151/367 (41%), Gaps = 50/367 (13%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCL---CDILVDNAGVERLQL---- 253
           G  A G++A D        L T  +S +      ++C+   C+ L D    E L L    
Sbjct: 225 GRVALGLRARDRPPAVPRPLPTSAMSAD------MQCVDIQCEELSDARWAELLPLLPRC 278

Query: 254 SSVDLRDEG-----AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSL 307
            +V L D G      + +   L+ NS L  L L NN +  +G   + +AL  +   I+ L
Sbjct: 279 QAVRLDDCGLSEAQCEDVGSALQANSALTELSLRNNEVGDAGVRRVLQALQSSPCKIQKL 338

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
                Y    G   L+  L    +L+ELHL  N +GD G++ L  GL   + +L  L + 
Sbjct: 339 SFQSCYLTVAGCGVLSGTLRSLPTLQELHLSDNPMGDAGLQLLCEGLLDPQCRLEKLQLE 398

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
             S+S+ G                             E +A  L+       + +  N+I
Sbjct: 399 YCSLSSAGC----------------------------EPLASVLRAKPDFKELTVSNNDI 430

Query: 428 HSKGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
              G  A+ + LKD+   + +L L    + +D  + L  +L    ++  L LG  ++G  
Sbjct: 431 DETGVRALCQGLKDSPCQLETLKLEKCGVTSDNCRDLCSILASKASLQELALGNNKLGDV 490

Query: 487 G-AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
           G  E    +L  ++ +  L +   GL  +    L +  +   ++L  + LA NE+ D+GA
Sbjct: 491 GITELCPGLLHPSSRLRTLWIWECGLTAKSCVDLCRVLRA-KDSLKELSLAGNELGDEGA 549

Query: 546 FAIAQAL 552
             + ++L
Sbjct: 550 QLLCESL 556


>gi|320167522|gb|EFW44421.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 739

 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 116/207 (56%), Gaps = 3/207 (1%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K    +  + L  N IGD GA+ I +ALK NRT+T + L  N I   GA A
Sbjct: 339 GAQAIAEALKVNTGVTTLVLGENQIGDAGAQAIGEALKVNRTLTELLLSENQIGDAGAQA 398

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A  LK N+ +T L L  N I   GA+A++E L     +N+L L   QIG +GA+ +A+ 
Sbjct: 399 VADALKVNTSLTELSLDQNHISDAGAQAIAEALIVSTTLNSLFLRQNQIGNAGAQAIAEA 458

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L  N T++ L L  N + D GA+ +A++ K+ N  +T I L  N I + GA AIA ALK 
Sbjct: 459 LTKNTTLTELHLSTNQIGDAGAQAIAEALKM-NAMVTEIGLRENHIGNAGAQAIADALKV 517

Query: 555 NEDVAVTSLNLANNFLTKFGQSALTDA 581
           N    +  LNL+ N +   G  A+  A
Sbjct: 518 N--TTLRYLNLSQNCIGSVGVRAIDKA 542



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 125/233 (53%), Gaps = 7/233 (3%)

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
           G   +RE  L     GD G +A+   L    G +  L +G N I   GA  + E +K  +
Sbjct: 326 GYTLMREYRL-----GDAGAQAIAEALKVNTG-VTTLVLGENQIGDAGAQAIGEALKVNR 379

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           +L  + L  N IGD GA+ +ADALK N ++T + L  N+I   GA AIA  L  ++ + S
Sbjct: 380 TLTELLLSENQIGDAGAQAVADALKVNTSLTELSLDQNHISDAGAQAIAEALIVSTTLNS 439

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L L  N IG  GA+A++E L  +  +  L L   QIG +GA+ +A+ L+ N  ++ + LR
Sbjct: 440 LFLRQNQIGNAGAQAIAEALTKNTTLTELHLSTNQIGDAGAQAIAEALKMNAMVTEIGLR 499

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
            N + + GA+ +A + K VN  L  ++L+ N I   G  AI +A K N   A+
Sbjct: 500 ENHIGNAGAQAIADALK-VNTTLRYLNLSQNCIGSVGVRAIDKAHKGNNTHAI 551



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 130/255 (50%), Gaps = 16/255 (6%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E+ + +++ SG+T + E  L               G  GA A+A+ L+ N  +  L L  
Sbjct: 316 EVYDKVMNASGYTLMREYRL---------------GDAGAQAIAEALKVNTGVTTLVLGE 360

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G +A+   L   +  L  L +  N I   GA  VA+ +K   SL  ++L  N I
Sbjct: 361 NQIGDAGAQAIGEALKVNR-TLTELLLSENQIGDAGAQAVADALKVNTSLTELSLDQNHI 419

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            D GA+ IA+AL  + T+ ++ L  N I + GA AIA  L  N+ +T L L+ N IG  G
Sbjct: 420 SDAGAQAIAEALIVSTTLNSLFLRQNQIGNAGAQAIAEALTKNTTLTELHLSTNQIGDAG 479

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           A+A++E LK +  +  + L    IG +GA+ +AD L+ N T+  L+L  N +   G + +
Sbjct: 480 AQAIAEALKMNAMVTEIGLRENHIGNAGAQAIADALKVNTTLRYLNLSQNCIGSVGVRAI 539

Query: 520 AQSFKVVNEALTSID 534
            ++ K  N     ID
Sbjct: 540 DKAHKGNNTHAIRID 554



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 107/183 (58%), Gaps = 3/183 (1%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +GD GA+ IA+ALK N  +TT+ LG N I   GA AI   LK N  +T L L+ N IG  
Sbjct: 335 LGDAGAQAIAEALKVNTGVTTLVLGENQIGDAGAQAIGEALKVNRTLTELLLSENQIGDA 394

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA+A+++ LK + ++  L L    I  +GA+ +A+ L  + T++ L LR N + + GA+ 
Sbjct: 395 GAQAVADALKVNTSLTELSLDQNHISDAGAQAIAEALIVSTTLNSLFLRQNQIGNAGAQA 454

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           +A++    N  LT + L+ N+I D GA AIA+ALK N    VT + L  N +   G  A+
Sbjct: 455 IAEAL-TKNTTLTELHLSTNQIGDAGAQAIAEALKMN--AMVTEIGLRENHIGNAGAQAI 511

Query: 579 TDA 581
            DA
Sbjct: 512 ADA 514



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 134/285 (47%), Gaps = 17/285 (5%)

Query: 140 SGFTGKLFRESK------QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           SG+T  L RE +      Q + E  K     +++ +     GD G   + E+L  N+T  
Sbjct: 325 SGYT--LMREYRLGDAGAQAIAEALKVNTGVTTLVLGENQIGDAGAQAIGEALKVNRTLT 382

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E+  + N I  AG +A    L+ N +L  L+L  N I D G + + + L+ +  +  L L
Sbjct: 383 ELLLSENQIGDAGAQAVADALKVNTSLTELSLDQNHISDAGAQAIAEALIVSTTLNSLFL 442

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               + + GA+AIAE L  N+ L  L L+ N I  +G  ++AEAL  N+ +  + L  N+
Sbjct: 443 RQNQIGNAGAQAIAEALTKNTTLTELHLSTNQIGDAGAQAIAEALKMNAMVTEIGLRENH 502

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD--IGNNSI 371
            G  GA A+A  L+ N +LR L+L  N IG  G+RA+             +D  I     
Sbjct: 503 IGNAGAQAIADALKVNTTLRYLNLSQNCIGSVGVRAIDKAHKGNNTHAIRIDGQISPLVF 562

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMND-------IGDEGAEKIAD 409
           S    F  AE I+    LL   L + D       + DE AE+I D
Sbjct: 563 STLPRFATAEEIQTVFCLLTSGLELEDQLASLPALPDELAERIVD 607



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 107/219 (48%), Gaps = 1/219 (0%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           + K + A     M     GD G   +AE+L  N     +    N I  AG +A    L+ 
Sbjct: 318 YDKVMNASGYTLMREYRLGDAGAQAIAEALKVNTGVTTLVLGENQIGDAGAQAIGEALKV 377

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L  L LS N IGD G + + D L  N  +  L L    + D GA+AIAE L  ++ L
Sbjct: 378 NRTLTELLLSENQIGDAGAQAVADALKVNTSLTELSLDQNHISDAGAQAIAEALIVSTTL 437

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L  N I  +G  ++AEAL +N+T+  LHL+ N  G  GA A+A+ L+ N  + E+ 
Sbjct: 438 NSLFLRQNQIGNAGAQAIAEALTKNTTLTELHLSTNQIGDAGAQAIAEALKMNAMVTEIG 497

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           L  N IG+ G +A+   L      L  L++  N I + G
Sbjct: 498 LRENHIGNAGAQAIADALKVNT-TLRYLNLSQNCIGSVG 535



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 181/413 (43%), Gaps = 59/413 (14%)

Query: 230 IGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
           IGD G + + + L + N  +  L L    + D GA+AIAE L+  +   +  L  N I  
Sbjct: 6   IGDAGAEVIAEALKEVNTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQNQIGD 65

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  +LA+AL  +ST++ L L  N  G  G  A+A+ L+ N +L  L+L  N IG  G++
Sbjct: 66  VGAQALADALKVSSTVKELLLTQNQIGNDGVQAIAEALQMNTTLTYLNLQSNCIGSVGVQ 125

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN----------- 397
           A+             LD   N + A   F      ++ +++   NL M+           
Sbjct: 126 AIEEARKVNCTSEVHLDNQINPL-AFSTFPQCATAEDTQTVF--NLLMSGQELENEFASL 182

Query: 398 -DIGDEGAEKIADA--LKQNRTITTIDLGGNN----------IHSKGASAI----ARVLK 440
             +  E AE+I D     Q    T  DL  +N            S   S+I     +VL+
Sbjct: 183 PTLPAEIAERIMDEAYYWQGVQFTKRDLFSSNHPDHFLKATVPRSINGSSIRVKAIQVLR 242

Query: 441 DNSVITSLDLAY----------------NPIGADGAKALSEVLKF-HGNINTLKLGWCQI 483
           D++  T+ DL +                 P   D    L+ +    H  I  ++ GW ++
Sbjct: 243 DSADATNGDLFHVIVRDEQGAARYECSAKPTFVDSTIELATIWPASHLIIRQMREGW-EV 301

Query: 484 GASGAEFVADMLRYNNTISILD------LRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
               +EF  D+L+      +++      +R   L D GA+ +A++ K VN  +T++ L  
Sbjct: 302 QVRPSEFPYDVLQREVYDKVMNASGYTLMREYRLGDAGAQAIAEALK-VNTGVTTLVLGE 360

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
           N+I D GA AI +ALK N    +T L L+ N +   G  A+ DA  +   ++E
Sbjct: 361 NQIGDAGAQAIGEALKVNR--TLTELLLSENQIGDAGAQAVADALKVNTSLTE 411



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 1/131 (0%)

Query: 396 MNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           M  IGD GAE IA+ALK+ N ++T + L  N I   GA AIA  L+  +      L  N 
Sbjct: 3   MKQIGDAGAEVIAEALKEVNTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQNQ 62

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA+AL++ LK    +  L L   QIG  G + +A+ L+ N T++ L+L++N +   
Sbjct: 63  IGDVGAQALADALKVSSTVKELLLTQNQIGNDGVQAIAEALQMNTTLTYLNLQSNCIGSV 122

Query: 515 GAKCLAQSFKV 525
           G + + ++ KV
Sbjct: 123 GVQAIEEARKV 133



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 2/148 (1%)

Query: 366 IGNNSISAKGAFHVAEYIKNC-KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           +G   I   GA  +AE +K    SL  ++LY N IGD GA  IA+AL+         L  
Sbjct: 1   MGMKQIGDAGAEVIAEALKEVNTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQ 60

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N I   GA A+A  LK +S +  L L  N IG DG +A++E L+ +  +  L L    IG
Sbjct: 61  NQIGDVGAQALADALKVSSTVKELLLTQNQIGNDGVQAIAEALQMNTTLTYLNLQSNCIG 120

Query: 485 ASGAEFVADMLRYNNTISI-LDLRANGL 511
           + G + + +  + N T  + LD + N L
Sbjct: 121 SVGVQAIEEARKVNCTSEVHLDNQINPL 148



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 3/100 (3%)

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           ++G +GA+ +A+ L+ N  ++ L L  N + D GA+ + ++ KV N  LT + L+ N+I 
Sbjct: 334 RLGDAGAQAIAEALKVNTGVTTLVLGENQIGDAGAQAIGEALKV-NRTLTELLLSENQIG 392

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           D GA A+A ALK N   ++T L+L  N ++  G  A+ +A
Sbjct: 393 DAGAQAVADALKVN--TSLTELSLDQNHISDAGAQAIAEA 430



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N +L  L+L  N IGD G + + + L   A      L    + D GA+A+A+ LK +S +
Sbjct: 22  NTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQNQIGDVGAQALADALKVSSTV 81

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           + L L  N I   G  ++AEAL  N+T+  L+L  N  G++G  A+ +  + N +  E+H
Sbjct: 82  KELLLTQNQIGNDGVQAIAEALQMNTTLTYLNLQSNCIGSVGVQAIEEARKVNCT-SEVH 140

Query: 337 L 337
           L
Sbjct: 141 L 141



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 2/143 (1%)

Query: 169 MSGRNFGDEGLFFLAESLG-YNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           M  +  GD G   +AE+L   N +   +S   N I  AG +A    L+        +L  
Sbjct: 1   MGMKQIGDAGAEVIAEALKEVNTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQ 60

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N IGD G + L D L  ++ V+ L L+   + ++G +AIAE L+ N+ L  L L +N I 
Sbjct: 61  NQIGDVGAQALADALKVSSTVKELLLTQNQIGNDGVQAIAEALQMNTTLTYLNLQSNCIG 120

Query: 288 YSGFTSLAEALLENSTIRSLHLN 310
             G  ++ EA   N T   +HL+
Sbjct: 121 SVGVQAIEEARKVNCT-SEVHLD 142



 Score = 42.7 bits (99), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 5/164 (3%)

Query: 152 QTLNEFAKELR-AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           + + E  KE+  + + + +     GD G   +AE+L     A   S   N I   G +A 
Sbjct: 12  EVIAEALKEVNTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQNQIGDVGAQAL 71

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
              L+ +  +K L L+ N IG++GV+ + + L  N  +  L L S  +   G +AI E  
Sbjct: 72  ADALKVSSTVKELLLTQNQIGNDGVQAIAEALQMNTTLTYLNLQSNCIGSVGVQAIEEAR 131

Query: 271 KNNSILRVLELNN--NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           K N    V  L+N  N + +S F   A A  +  T+ +L ++G 
Sbjct: 132 KVNCTSEV-HLDNQINPLAFSTFPQCATA-EDTQTVFNLLMSGQ 173


>gi|297817654|ref|XP_002876710.1| RANGAP1 [Arabidopsis lyrata subsp. lyrata]
 gi|297322548|gb|EFH52969.1| RANGAP1 [Arabidopsis lyrata subsp. lyrata]
          Length = 531

 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 168/355 (47%), Gaps = 36/355 (10%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG--YNQTAE-EVS-FAANGITA 204
           E++Q L   A+   +F+ +  S R+FG E   F A  L    +Q  E ++S F A    A
Sbjct: 130 EARQLLRPLARPHNSFTKIRFSNRSFGSEAAKFAASVLSSIKDQLTEVDLSDFVAGRPEA 189

Query: 205 AGIKA---FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
             ++    F   L+ +  L+ LNLS N +G++G++    ++     +E L L +  + ++
Sbjct: 190 EALEVMNMFSSALEGS-KLRYLNLSDNALGEKGIRAFASLIKSQNDLEELYLMNDGISED 248

Query: 262 GAKAIAELLKNNSILRVLELNNNM----------------------------IDYSGFTS 293
            A+A+ ELL +   +RVL+ +NNM                            I   G  +
Sbjct: 249 AARAVRELLPSTGKIRVLQFHNNMTGDEGAIAIAEIVRHCPSLEDFRCSSTRIGSEGGVA 308

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LAEAL   S ++ L L  N  G  G  ALAK L     L E+++   ++ DEG  AL   
Sbjct: 309 LAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGAEALSEA 368

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L      L VL++  N I+ K A ++A  I + +SL  +NL  N++ DEG   IA A++ 
Sbjct: 369 LLKSAPSLEVLELAGNDITVKSAGNLAACIASKQSLSKLNLSENELKDEGTILIAKAVEG 428

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +  +  +DL  N I   GA A+A+ +        L++  N I  +G   ++++ K
Sbjct: 429 HDQLVEVDLSTNMIRRAGARALAQTVVKKHTFKLLNINGNFISEEGIDEVNDMFK 483



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 5/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S +R L+L+ N  G  G  A A  ++    L EL+L  + I ++  RA+   L S  
Sbjct: 202 LEGSKLRYLNLSDNALGEKGIRAFASLIKSQNDLEELYLMNDGISEDAARAVRELLPS-T 260

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
           GK+ VL   NN    +GA  +AE +++C SL         IG EG   +A+AL+    + 
Sbjct: 261 GKIRVLQFHNNMTGDEGAIAIAEIVRHCPSLEDFRCSSTRIGSEGGVALAEALEHCSHLK 320

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLK 477
            +DL  N    +G  A+A+ L   + +T + ++Y  +  +GA+ALSE +LK   ++  L+
Sbjct: 321 KLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGAEALSEALLKSAPSLEVLE 380

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           L    I    A  +A  +    ++S L+L  N L+DEG   +A++ +  ++ L  +DL+ 
Sbjct: 381 LAGNDITVKSAGNLAACIASKQSLSKLNLSENELKDEGTILIAKAVEG-HDQLVEVDLST 439

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N IR  GA A+AQ +       +  LN+  NF+++ G   + D
Sbjct: 440 NMIRRAGARALAQTVVKKHTFKL--LNINGNFISEEGIDEVND 480



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 148/277 (53%), Gaps = 8/277 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG+K LR L+L  N++G++GIRA  S + S +  L  L + N+ IS   A  V
Sbjct: 196 NMFSSALEGSK-LRYLNLSDNALGEKGIRAFASLIKS-QNDLEELYLMNDGISEDAARAV 253

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + +   +  +  + N  GDEGA  IA+ ++   ++         I S+G  A+A  L
Sbjct: 254 RELLPSTGKIRVLQFHNNMTGDEGAIAIAEIVRHCPSLEDFRCSSTRIGSEGGVALAEAL 313

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD-MLRYN 498
           +  S +  LDL  N  G +G  AL++ L    ++  + + +  +   GAE +++ +L+  
Sbjct: 314 EHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGAEALSEALLKSA 373

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++ +L+L  N +  + A  LA       ++L+ ++L+ NE++D+G   IA+A++ ++  
Sbjct: 374 PSLEVLELAGNDITVKSAGNLAACI-ASKQSLSKLNLSENELKDEGTILIAKAVEGHDQ- 431

Query: 559 AVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 595
            +  ++L+ N + + G  AL  A+ +V + + K +NI
Sbjct: 432 -LVEVDLSTNMIRRAGARAL--AQTVVKKHTFKLLNI 465


>gi|189501572|ref|YP_001957289.1| cyclin domain-containing protein [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497013|gb|ACE05560.1| cyclin domain protein F-box protein [Candidatus Amoebophilus
           asiaticus 5a2]
          Length = 770

 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 182/349 (52%), Gaps = 16/349 (4%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + TLNL  N IG EG   +   L     V  L L    +  EGA  +A+ L+   + + L
Sbjct: 417 VHTLNLRFNEIGAEGAIEVAKAL-QGTQVHTLDLVYNQIGAEGAIEVAKALQGTQVHK-L 474

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L+NN I   G   +A+AL + + + +L+L GN  G  GA  LAK L+G + +  L+L  
Sbjct: 475 DLSNNQIGAEGAIEVAKAL-QGTQVHTLNLMGNQIGNEGAIELAKALQGTQ-VHTLYLRR 532

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I +EG   +   L     ++  L + +N I A+G   +A  ++  + +  + L  N I
Sbjct: 533 NQIDNEGAIEVAKALQG--AQVHTLSLSDNQIGAEGVIELANALQGTQ-VHTLYLSHNQI 589

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G+EGA  +A AL Q   + T+DL  N I ++GA  +A+ L+   V   LDL++N I  +G
Sbjct: 590 GNEGAIGLAKAL-QGAQVYTLDLSHNQIDNEGAIGLAKALQGTQV-HKLDLSHNQIDNEG 647

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           A  L++ L+    ++ L L   +I   GA  +A  L+    +  L+L  N + +EGA  L
Sbjct: 648 AIGLAKALQG-TQVHKLDLSHSKIDNEGAIGLAKALQ-GTQVHTLNLMINEIGNEGAIGL 705

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           A++ +     + ++DL  N I ++GA  +A+AL+  +   V +L L+ N
Sbjct: 706 AKALQ--GTQVHTLDLMANAIGNEGAIGLAKALQGTQ---VHTLGLSAN 749



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 104/185 (56%), Gaps = 9/185 (4%)

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N  G + A ++A AL Q   + T++L  N I ++GA  +A+ L+   V T LDL YN IG
Sbjct: 398 NKAGAKRAIELARAL-QGTQVHTLNLRFNEIGAEGAIEVAKALQGTQVHT-LDLVYNQIG 455

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
           A+GA  +++ L+    ++ L L   QIGA GA  VA  L+    +  L+L  N + +EGA
Sbjct: 456 AEGAIEVAKALQG-TQVHKLDLSNNQIGAEGAIEVAKALQ-GTQVHTLNLMGNQIGNEGA 513

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 576
             LA++ +     + ++ L  N+I ++GA  +A+AL+  +   V +L+L++N +   G  
Sbjct: 514 IELAKALQ--GTQVHTLYLRRNQIDNEGAIEVAKALQGAQ---VHTLSLSDNQIGAEGVI 568

Query: 577 ALTDA 581
            L +A
Sbjct: 569 ELANA 573


>gi|345803729|ref|XP_854810.2| PREDICTED: uncharacterized protein C14orf166B [Canis lupus
           familiaris]
          Length = 491

 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 9/297 (3%)

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            L N     ++LN +  G  G  A+A  L  N S+  L L  N + +EGI +L+  L   
Sbjct: 104 FLRNMEESYMNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNGLMEEGILSLLEMLQEN 163

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRT 416
              L  L++ +N +  KGA  ++E+++   S LW + L  N+  DE AE +  AL  N  
Sbjct: 164 Y-YLQELNVSDNDLGFKGAKIISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALAANYQ 222

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I T+DL  N    KG   + ++L  N  + SLDL++N     GA AL   L+ +G +  L
Sbjct: 223 IKTLDLSHNQFSDKGGEYMGQMLALNVGLQSLDLSWNHFYIRGAVALCNGLRANGTLQKL 282

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L     G  GA  + ++LR N+++  LD+  N + +EG   +++  +  NE+L  + L 
Sbjct: 283 DLSMNGFGNEGATALGEVLRLNSSLVYLDISINDISNEGISKISKGLE-FNESLKVLKLF 341

Query: 537 FNEIRDDGAFAIAQALKAN-----EDVAVTSLNLANNFLTKF-GQSALTDAKDLVYE 587
            N +  DGA  +  ++K N     E++ ++++ ++  FL    G  A+    D+VY+
Sbjct: 342 LNPMSMDGAVLLILSIKRNPKSKMEEIDISNVLVSEQFLKILDGVCAIHPQLDVVYK 398



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 147/315 (46%), Gaps = 32/315 (10%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N +   +  A NG+   GI +   +LQ N  L+ LN
Sbjct: 111 SYMNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNGLMEEGILSLLEMLQENYYLQELN 170

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G +G K + + L  N + +  LQLS  + RDE A+ + + L  N  ++ L+L++
Sbjct: 171 VSDNDLGFKGAKIISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALAANYQIKTLDLSH 230

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   + + L  N  ++SL L+ N+    GA AL  GL  N +L++L L  N  G
Sbjct: 231 NQFSDKGGEYMGQMLALNVGLQSLDLSWNHFYIRGAVALCNGLRANGTLQKLDLSMNGFG 290

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL                              E ++   SL+++++ +NDI +EG
Sbjct: 291 NEGATAL-----------------------------GEVLRLNSSLVYLDISINDISNEG 321

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLAYNPIGADGAK 461
             KI+  L+ N ++  + L  N +   GA  +   +K N  S +  +D++   +     K
Sbjct: 322 ISKISKGLEFNESLKVLKLFLNPMSMDGAVLLILSIKRNPKSKMEEIDISNVLVSEQFLK 381

Query: 462 ALSEVLKFHGNINTL 476
            L  V   H  ++ +
Sbjct: 382 ILDGVCAIHPQLDVV 396



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V  L+L+   L +EG  ++ E+L+ N  L
Sbjct: 107 NMEESYMNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNGLMEEGILSLLEMLQENYYL 166

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L +++N + + G   ++E L  N S++ +L L+GN      A  L + L  N  ++ L
Sbjct: 167 QELNVSDNDLGFKGAKIISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALAANYQIKTL 226

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D+G   +   L+   G L  LD+  N    +GA  +   ++   +L  ++L 
Sbjct: 227 DLSHNQFSDKGGEYMGQMLALNVG-LQSLDLSWNHFYIRGAVALCNGLRANGTLQKLDLS 285

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+EGA  + + L+ N ++  +D+  N+I ++G S I++ L+ N  +  L L  NP+
Sbjct: 286 MNGFGNEGATALGEVLRLNSSLVYLDISINDISNEGISKISKGLEFNESLKVLKLFLNPM 345

Query: 456 GADGAKAL 463
             DGA  L
Sbjct: 346 SMDGAVLL 353



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 120/228 (52%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N +   G  SL E L EN  ++ L+++ N  G  GA  
Sbjct: 124 GTKAIAIALVSNTSVVTLELADNGLMEEGILSLLEMLQENYYLQELNVSDNDLGFKGAKI 183

Query: 322 LAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +++ L+ N  SL  L L GN+  DE    L   L++   ++  LD+ +N  S KG  ++ 
Sbjct: 184 ISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALAANY-QIKTLDLSHNQFSDKGGEYMG 242

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  ++L  N     GA  + + L+ N T+  +DL  N   ++GA+A+  VL+
Sbjct: 243 QMLALNVGLQSLDLSWNHFYIRGAVALCNGLRANGTLQKLDLSMNGFGNEGATALGEVLR 302

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  LD++ N I  +G   +S+ L+F+ ++  LKL    +   GA
Sbjct: 303 LNSSLVYLDISINDISNEGISKISKGLEFNESLKVLKLFLNPMSMDGA 350



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 3/178 (1%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           V+ +++N +   ++NL  + +G  G + IA AL  N ++ T++L  N +  +G  ++  +
Sbjct: 101 VSYFLRNMEES-YMNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNGLMEEGILSLLEM 159

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVADMLRY 497
           L++N  +  L+++ N +G  GAK +SE L+ +  ++  L+L         AE +   L  
Sbjct: 160 LQENYYLQELNVSDNDLGFKGAKIISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALAA 219

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           N  I  LDL  N   D+G + + Q    +N  L S+DL++N     GA A+   L+AN
Sbjct: 220 NYQIKTLDLSHNQFSDKGGEYMGQML-ALNVGLQSLDLSWNHFYIRGAVALCNGLRAN 276



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 1/150 (0%)

Query: 142 FTGKLFR-ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN 200
            +G  FR ES + L +         ++D+S   F D+G  ++ + L  N   + +  + N
Sbjct: 200 LSGNNFRDESAELLCQALAANYQIKTLDLSHNQFSDKGGEYMGQMLALNVGLQSLDLSWN 259

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
                G  A    L++N  L+ L+LS N  G+EG   L ++L  N+ +  L +S  D+ +
Sbjct: 260 HFYIRGAVALCNGLRANGTLQKLDLSMNGFGNEGATALGEVLRLNSSLVYLDISINDISN 319

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           EG   I++ L+ N  L+VL+L  N +   G
Sbjct: 320 EGISKISKGLEFNESLKVLKLFLNPMSMDG 349


>gi|320164588|gb|EFW41487.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 485

 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 150/305 (49%), Gaps = 37/305 (12%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L LS   + +  A+A+ E LK N+ L  L L+ N I      ++A+ L  N TI++L L 
Sbjct: 24  LMLSGARMNEAEAQAVVEGLKVNTKLIFLSLSTNPI---AAVTIADLLRVNKTIQNLFLQ 80

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G   A A+A  L+ N +L +L L  N IGD                          
Sbjct: 81  ENQIGDADAVAIADALKVNTTLNDLDLKVNQIGD-------------------------- 114

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
               GA  +A+ +K   +L  + L  N IGD GA  IA+ALK N T+  + L  N I   
Sbjct: 115 ---AGAVAIADALKLNMTLKKLRLDENQIGDAGAVAIANALKLNTTLARLLLVENQIGKA 171

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AIA  L  N+ +T L L  N IG  GA+A++E LK +  +  L+L   QIG  GA+ 
Sbjct: 172 GAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLTELRLHQTQIGDVGAQA 231

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA--I 548
           +A+ L+ N T+  L L  N + D GA+ +A++ K  N    ++DL  N I  D AF   +
Sbjct: 232 IAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALK-GNPTGITVDLNSNCI--DRAFVQLV 288

Query: 549 AQALK 553
            QA K
Sbjct: 289 KQAQK 293



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 1/186 (0%)

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L  N T  ++    N I  AG  A    L+ N+ LK L L  N IGD G   + + L  N
Sbjct: 96  LKVNTTLNDLDLKVNQIGDAGAVAIADALKLNMTLKKLRLDENQIGDAGAVAIANALKLN 155

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             + RL L    +   GA+AIAE L  N+ +  L L+ N I  +G  ++AEAL  N+T+ 
Sbjct: 156 TTLARLLLVENQIGKAGAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLT 215

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L+    G +GA A+A+ L+ N +L +L L GN IGD G +A+   L      + V D
Sbjct: 216 ELRLHQTQIGDVGAQAIAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALKGNPTGITV-D 274

Query: 366 IGNNSI 371
           + +N I
Sbjct: 275 LNSNCI 280



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 2/139 (1%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G  G   +AE+L  N T  E+    N I  AG +A    L+ N  L  L L    IGD 
Sbjct: 168 IGKAGAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLTELRLHQTQIGDV 227

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  +  LQLS   + D GA+AIAE LK N     ++LN+N ID +    
Sbjct: 228 GAQAIAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALKGNPTGITVDLNSNCIDRAFVQL 287

Query: 294 LAEALLENSTIRSLHLNGN 312
           + +A  + +  R L+L+ +
Sbjct: 288 VKQA--QKTKNRGLYLSND 304


>gi|320170925|gb|EFW47824.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 670

 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 122/201 (60%), Gaps = 6/201 (2%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N+ G+ GA+ IA+ALK N  +TT+DL  N I   GA AIA  LK N+ +TSL   
Sbjct: 2   LDLKWNETGEAGAQAIAEALKVNTKLTTVDLYNNLIGDVGAHAIAEALKVNTKLTSLLEK 61

Query: 452 YNPIGADG---AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            +   +DG   A+A++E LK +  +  L+LG  QIG  GA+ +A +L  N T++ L L  
Sbjct: 62  QSECESDGDAGAQAIAEALKVNTTLKELRLGENQIGNVGAQAIAVVLSVNTTLTTLSLGV 121

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           N + D GA+ +A++ KV N  +T + L  N+I D GA  +A+ALK N++  +T+L L  N
Sbjct: 122 NQIGDIGAQAIAEALKV-NTTMTRLYLDENQIGDAGAQMLAEALKMNKN--LTTLYLDQN 178

Query: 569 FLTKFGQSALTDAKDLVYEMS 589
           F+++ G +AL    +   ++S
Sbjct: 179 FISENGINALKQVGNRTCKLS 199



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 109/191 (57%), Gaps = 4/191 (2%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           +LD+  N     GA  +AE +K    L  ++LY N IGD GA  IA+ALK N  +T++  
Sbjct: 1   MLDLKWNETGEAGAQAIAEALKVNTKLTTVDLYNNLIGDVGAHAIAEALKVNTKLTSLLE 60

Query: 423 GGNNIHSKG---ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
             +   S G   A AIA  LK N+ +  L L  N IG  GA+A++ VL  +  + TL LG
Sbjct: 61  KQSECESDGDAGAQAIAEALKVNTTLKELRLGENQIGNVGAQAIAVVLSVNTTLTTLSLG 120

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
             QIG  GA+ +A+ L+ N T++ L L  N + D GA+ LA++ K +N+ LT++ L  N 
Sbjct: 121 VNQIGDIGAQAIAEALKVNTTMTRLYLDENQIGDAGAQMLAEALK-MNKNLTTLYLDQNF 179

Query: 540 IRDDGAFAIAQ 550
           I ++G  A+ Q
Sbjct: 180 ISENGINALKQ 190



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 103/190 (54%), Gaps = 4/190 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCK--SLLW 391
           L L  N  G+ G +A+   L     KL  +D+ NN I   GA  +AE +K N K  SLL 
Sbjct: 2   LDLKWNETGEAGAQAIAEALKVNT-KLTTVDLYNNLIGDVGAHAIAEALKVNTKLTSLLE 60

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
                   GD GA+ IA+ALK N T+  + LG N I + GA AIA VL  N+ +T+L L 
Sbjct: 61  KQSECESDGDAGAQAIAEALKVNTTLKELRLGENQIGNVGAQAIAVVLSVNTTLTTLSLG 120

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA+A++E LK +  +  L L   QIG +GA+ +A+ L+ N  ++ L L  N +
Sbjct: 121 VNQIGDIGAQAIAEALKVNTTMTRLYLDENQIGDAGAQMLAEALKMNKNLTTLYLDQNFI 180

Query: 512 RDEGAKCLAQ 521
            + G   L Q
Sbjct: 181 SENGINALKQ 190



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 105/210 (50%), Gaps = 32/210 (15%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL---HLNGNYGGA 316
           + GA+AIAE LK N+ L  ++L NN+I   G  ++AEAL  N+ + SL          G 
Sbjct: 11  EAGAQAIAEALKVNTKLTTVDLYNNLIGDVGAHAIAEALKVNTKLTSLLEKQSECESDGD 70

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            GA A+A+ L+ N +L+EL L  N IG+ G +A+   LS                     
Sbjct: 71  AGAQAIAEALKVNTTLKELRLGENQIGNVGAQAIAVVLSVNT------------------ 112

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
                      +L  ++L +N IGD GA+ IA+ALK N T+T + L  N I   GA  +A
Sbjct: 113 -----------TLTTLSLGVNQIGDIGAQAIAEALKVNTTMTRLYLDENQIGDAGAQMLA 161

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEV 466
             LK N  +T+L L  N I  +G  AL +V
Sbjct: 162 EALKMNKNLTTLYLDQNFISENGINALKQV 191



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 93/193 (48%), Gaps = 15/193 (7%)

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L +N+T E           AG +A    L+ N  L T++L  N IGD G   + + L  N
Sbjct: 4   LKWNETGE-----------AGAQAIAEALKVNTKLTTVDLYNNLIGDVGAHAIAEALKVN 52

Query: 246 AGVERLQLSSVDLR---DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
             +  L     +     D GA+AIAE LK N+ L+ L L  N I   G  ++A  L  N+
Sbjct: 53  TKLTSLLEKQSECESDGDAGAQAIAEALKVNTTLKELRLGENQIGNVGAQAIAVVLSVNT 112

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           T+ +L L  N  G +GA A+A+ L+ N ++  L+L  N IGD G + L   L   K  L 
Sbjct: 113 TLTTLSLGVNQIGDIGAQAIAEALKVNTTMTRLYLDENQIGDAGAQMLAEALKMNKN-LT 171

Query: 363 VLDIGNNSISAKG 375
            L +  N IS  G
Sbjct: 172 TLYLDQNFISENG 184



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 91/187 (48%), Gaps = 3/187 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL--- 223
           +D+     G+ G   +AE+L  N     V    N I   G  A    L+ N  L +L   
Sbjct: 2   LDLKWNETGEAGAQAIAEALKVNTKLTTVDLYNNLIGDVGAHAIAEALKVNTKLTSLLEK 61

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
                  GD G + + + L  N  ++ L+L    + + GA+AIA +L  N+ L  L L  
Sbjct: 62  QSECESDGDAGAQAIAEALKVNTTLKELRLGENQIGNVGAQAIAVVLSVNTTLTTLSLGV 121

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  ++AEAL  N+T+  L+L+ N  G  GA  LA+ L+ NK+L  L+L  N I 
Sbjct: 122 NQIGDIGAQAIAEALKVNTTMTRLYLDENQIGDAGAQMLAEALKMNKNLTTLYLDQNFIS 181

Query: 344 DEGIRAL 350
           + GI AL
Sbjct: 182 ENGINAL 188



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 9/187 (4%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-----AEEVSFAANGITAAG 206
           Q + E  K     ++VD+     GD G   +AE+L  N        ++    ++G   AG
Sbjct: 15  QAIAEALKVNTKLTTVDLYNNLIGDVGAHAIAEALKVNTKLTSLLEKQSECESDG--DAG 72

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            +A    L+ N  LK L L  N IG+ G + +  +L  N  +  L L    + D GA+AI
Sbjct: 73  AQAIAEALKVNTTLKELRLGENQIGNVGAQAIAVVLSVNTTLTTLSLGVNQIGDIGAQAI 132

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE LK N+ +  L L+ N I  +G   LAEAL  N  + +L+L+ N+    G NAL +  
Sbjct: 133 AEALKVNTTMTRLYLDENQIGDAGAQMLAEALKMNKNLTTLYLDQNFISENGINALKQ-- 190

Query: 327 EGNKSLR 333
            GN++ +
Sbjct: 191 VGNRTCK 197


>gi|410931379|ref|XP_003979073.1| PREDICTED: leucine-rich repeat-containing protein 34-like, partial
           [Takifugu rubripes]
          Length = 742

 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 10/309 (3%)

Query: 222 TLNLSGNP-----IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           TL+LSG+      + D+    +   L +N  V  L +S  ++ DEG K  A+LL+++S L
Sbjct: 395 TLDLSGSRKCVQRLDDKDALVVSKCLRNNRRVTGLDVSYNNITDEGLKHFADLLQDDSTL 454

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L+L  N     G  +LA+ L  NST+ SL L+GN  G  G   LA  L+ N SL EL 
Sbjct: 455 NSLDLRFNDCQTDGAKALAKILQGNSTLFSLTLSGNKIGDSGGIQLAMMLQANDSLMELE 514

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA---FHVAEYIKNCKSLLWIN 393
           L    +G E I    + L S +  L  +D   + +++       HV++ +    SLL ++
Sbjct: 515 LAACDLGIESIITFANVLKSNRS-LRRVDFSQSLLTSHQEEWLLHVSDMLAMNSSLLELH 573

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L M  + D G E++A+ L  NR +  +DL  N +   GAS +A VLK N+ +  +DL++N
Sbjct: 574 LGMAGMTDTGMERLAEGLAANRALRYLDLRCNRLSCDGASHLAGVLKQNATLDVIDLSFN 633

Query: 454 PIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            I   GA  +SE L   G  +  L +    IG  G   +A  ++ N T++ +++  N L 
Sbjct: 634 RIQNGGAVHMSEALASPGCGLRALSVSSNSIGTDGLLSLAQAVKANRTLTDINIWGNDLE 693

Query: 513 DEGAKCLAQ 521
           +   +   Q
Sbjct: 694 EPVCQVFRQ 702



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 151/310 (48%), Gaps = 8/310 (2%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  + +D+S  N  DEGL   A+ L  + T   +    N     G KA   +LQ N  L 
Sbjct: 424 RRVTGLDVSYNNITDEGLKHFADLLQDDSTLNSLDLRFNDCQTDGAKALAKILQGNSTLF 483

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L LSGN IGD G   L  +L  N  +  L+L++ DL  E     A +LK+N  LR ++ 
Sbjct: 484 SLTLSGNKIGDSGGIQLAMMLQANDSLMELELAACDLGIESIITFANVLKSNRSLRRVDF 543

Query: 282 NNNMI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + +++          +++ L  NS++  LHL        G   LA+GL  N++LR L L 
Sbjct: 544 SQSLLTSHQEEWLLHVSDMLAMNSSLLELHLGMAGMTDTGMERLAEGLAANRALRYLDLR 603

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN--CKSLLWINLYM 396
            N +  +G   L +G+  +   L V+D+  N I   GA H++E + +  C  L  +++  
Sbjct: 604 CNRLSCDGASHL-AGVLKQNATLDVIDLSFNRIQNGGAVHMSEALASPGC-GLRALSVSS 661

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IG +G   +A A+K NRT+T I++ GN++  +    + R L  +  +        P  
Sbjct: 662 NSIGTDGLLSLAQAVKANRTLTDINIWGNDL-EEPVCQVFRQLIRSGRLPPDKTDVTPFE 720

Query: 457 ADGAKALSEV 466
            DG   L+E+
Sbjct: 721 TDGRVFLAEL 730



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 146/316 (46%), Gaps = 34/316 (10%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           L D+ A  +++ L+NN  +  L+++ N I   G    A+ L ++ST+ SL L  N     
Sbjct: 408 LDDKDALVVSKCLRNNRRVTGLDVSYNNITDEGLKHFADLLQDDSTLNSLDLRFNDCQTD 467

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA ALAK L+GN +L  L L G                             N I   G  
Sbjct: 468 GAKALAKILQGNSTLFSLTLSG-----------------------------NKIGDSGGI 498

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS---A 434
            +A  ++   SL+ + L   D+G E     A+ LK NR++  +D   + + S        
Sbjct: 499 QLAMMLQANDSLMELELAACDLGIESIITFANVLKSNRSLRRVDFSQSLLTSHQEEWLLH 558

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           ++ +L  NS +  L L    +   G + L+E L  +  +  L L   ++   GA  +A +
Sbjct: 559 VSDMLAMNSSLLELHLGMAGMTDTGMERLAEGLAANRALRYLDLRCNRLSCDGASHLAGV 618

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L+ N T+ ++DL  N +++ GA  ++++       L ++ ++ N I  DG  ++AQA+KA
Sbjct: 619 LKQNATLDVIDLSFNRIQNGGAVHMSEALASPGCGLRALSVSSNSIGTDGLLSLAQAVKA 678

Query: 555 NEDVAVTSLNLANNFL 570
           N    +T +N+  N L
Sbjct: 679 NR--TLTDINIWGNDL 692


>gi|198431313|ref|XP_002120047.1| PREDICTED: similar to predicted protein isoform 1 [Ciona
           intestinalis]
          Length = 661

 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 152/291 (52%), Gaps = 4/291 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+F++VD+  ++    G+   +  + + Q  E ++ + +G+   G KA    L  N ++ 
Sbjct: 67  RSFTAVDIYFKSCEQLGVVPASYFVTHLQ-HEVMNMSHHGLGPNGTKAIAAPLVINTSIL 125

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LN+  N I  EG++ + D+L++N  +  L +S   L  EGA+ + E+L+ N+ LR L +
Sbjct: 126 ELNIEDNWITAEGMRDIADMLMENCYISILNISHNKLGSEGARYVGEMLQENTTLRTLNI 185

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N    S     AEAL +N  ++ L ++GN    LG   + + +  N+++  L+L  N 
Sbjct: 186 SRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCELGGEWMGQAIAANEAIETLNLSWNH 245

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +  +G  A+ +G+ S    +  LD+  N  + +GA  + E +K   +L+W++L  N I D
Sbjct: 246 LRLKGALAVCAGMKS-NITVKTLDLSWNGFADEGAMAMGEALKTNNTLVWLDLSFNRISD 304

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDL 450
           +G   +A  L+ N T+ T+ +G N    +GA  +   +  N  S I  LDL
Sbjct: 305 KGLTMLAKGLEVNDTLRTLRIGDNPFGEEGALLLINAIFKNEKSAIEDLDL 355



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 131/251 (52%), Gaps = 2/251 (0%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G  A+A  L  N S+ EL++  N I  EG+R +   L      +++L+I +N + ++
Sbjct: 107 GPNGTKAIAAPLVINTSILELNIEDNWITAEGMRDIADMLME-NCYISILNISHNKLGSE 165

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA +V E ++   +L  +N+  ND  D   +  A+AL+QN  +  +D+ GN     G   
Sbjct: 166 GARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCELGGEW 225

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           + + +  N  I +L+L++N +   GA A+   +K +  + TL L W      GA  + + 
Sbjct: 226 MGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADEGAMAMGEA 285

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L+ NNT+  LDL  N + D+G   LA+  + VN+ L ++ +  N   ++GA  +  A+  
Sbjct: 286 LKTNNTLVWLDLSFNRISDKGLTMLAKGLE-VNDTLRTLRIGDNPFGEEGALLLINAIFK 344

Query: 555 NEDVAVTSLNL 565
           NE  A+  L+L
Sbjct: 345 NEKSAIEDLDL 355



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 3/265 (1%)

Query: 249 ERLQLSSVDLRDEGAKAIA-ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           E + +S   L   G KAIA  L+ N SIL  L + +N I   G   +A+ L+EN  I  L
Sbjct: 97  EVMNMSHHGLGPNGTKAIAAPLVINTSILE-LNIEDNWITAEGMRDIADMLMENCYISIL 155

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +++ N  G+ GA  + + L+ N +LR L++  N   D   +     L  +  +L  LDI 
Sbjct: 156 NISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALR-QNFRLKELDIS 214

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N     G   + + I   +++  +NL  N +  +GA  +   +K N T+ T+DL  N  
Sbjct: 215 GNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGF 274

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             +GA A+   LK N+ +  LDL++N I   G   L++ L+ +  + TL++G    G  G
Sbjct: 275 ADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFGEEG 334

Query: 488 AEFVADMLRYNNTISILDLRANGLR 512
           A  + + +  N   +I DL    +R
Sbjct: 335 ALLLINAIFKNEKSAIEDLDLKSVR 359



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 2/228 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S +++S    G EG  ++ E L  N T   ++ + N    +  + F   L+ N  LK L
Sbjct: 152 ISILNISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKEL 211

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++SGN   + G + +   +  N  +E L LS   LR +GA A+   +K+N  ++ L+L+ 
Sbjct: 212 DISGNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSW 271

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G  ++ EAL  N+T+  L L+ N     G   LAKGLE N +LR L +  N  G
Sbjct: 272 NGFADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFG 331

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF-HVAEYIKNCKSLL 390
           +EG   L++ +  +  K A+ D+   S+     F  +AE ++   S L
Sbjct: 332 EEGALLLINAI-FKNEKSAIEDLDLKSVRVNREFLELAEKLRGRTSSL 378



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 34/241 (14%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           V+++ ++ +   G   +A  +    S+L +N+  N I  EG   IAD L +N  I+ +++
Sbjct: 98  VMNMSHHGLGPNGTKAIAAPLVINTSILELNIEDNWITAEGMRDIADMLMENCYISILNI 157

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK---------FHGN- 472
             N + S+GA  +  +L++N+ + +L+++ N       +  +E L+           GN 
Sbjct: 158 SHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGNE 217

Query: 473 ------------------INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
                             I TL L W  +   GA  V   ++ N T+  LDL  NG  DE
Sbjct: 218 FCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADE 277

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           GA  + ++ K  N  L  +DL+FN I D G   +A+ L+ N+   + +L + +N    FG
Sbjct: 278 GAMAMGEALK-TNNTLVWLDLSFNRISDKGLTMLAKGLEVND--TLRTLRIGDN---PFG 331

Query: 575 Q 575
           +
Sbjct: 332 E 332



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 88/175 (50%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL  E  + + E  +E     ++++S  +F D    + AE+L  N   +E+  + N    
Sbjct: 161 KLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCE 220

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +     + +N A++TLNLS N +  +G   +C  +  N  V+ L LS     DEGA 
Sbjct: 221 LGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADEGAM 280

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           A+ E LK N+ L  L+L+ N I   G T LA+ L  N T+R+L +  N  G  GA
Sbjct: 281 AMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFGEEGA 335


>gi|349934864|dbj|GAA29381.1| leucine-rich repeat-containing protein 34 [Clonorchis sinensis]
          Length = 421

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 156/298 (52%), Gaps = 10/298 (3%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           + D+ +K +C  L+    +  L L    ++DEGA  IA  L ++ +L+ L L  N I   
Sbjct: 71  LEDQDIKPICTALLLKPCITMLDLRYNRIKDEGAAIIASFLTDDQLLQELNLAGNDITEI 130

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   +A AL  N  +  L + GN  G+ G   LA+ L+ N++L  + L G    D+ I +
Sbjct: 131 GAACIATALRTNKVLLVLKMTGNPIGSTGGLRLAQALQVNRTLEFIDL-GEC--DQTITS 187

Query: 350 LMS--GLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            ++   +  R   +  L++      ++  +   H+AE +    +L  ++L   D+ D GA
Sbjct: 188 CIAFATMLQRNKTIKSLNLNRQLLWTLQEEPTVHIAEMLCINSTLRELHLSKVDMRDFGA 247

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           +++ADAL++N T+  +D+  N I   GA A++RV+  N  +  LDLA+N I   GAKAL+
Sbjct: 248 KRLADALERNHTLELLDISANRIARDGAIALSRVVMANCSLVILDLAFNRIQCAGAKALA 307

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
             L  +  +  L + +C++ + G   +A+ L  NNT++ + +  N   DE + C+A S
Sbjct: 308 TALITNTCLKVLAVQFCELKSPGLCALAESLITNNTLTNIYIWGNE-HDE-STCIAYS 363



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 126/286 (44%), Gaps = 4/286 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +D+      DEG   +A  L  +Q  +E++ A N IT  G       L++N  L  
Sbjct: 88  CITMLDLRYNRIKDEGAAIIASFLTDDQLLQELNLAGNDITEIGAACIATALRTNKVLLV 147

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L ++GNPIG  G   L   L  N  +E + L   D       A A +L+ N  ++ L LN
Sbjct: 148 LKMTGNPIGSTGGLRLAQALQVNRTLEFIDLGECDQTITSCIAFATMLQRNKTIKSLNLN 207

Query: 283 NNM---IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +   +       +AE L  NST+R LHL+       GA  LA  LE N +L  L +  
Sbjct: 208 RQLLWTLQEEPTVHIAEMLCINSTLRELHLSKVDMRDFGAKRLADALERNHTLELLDISA 267

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  +G  AL S +      L +LD+  N I   GA  +A  +     L  + +   ++
Sbjct: 268 NRIARDGAIAL-SRVVMANCSLVILDLAFNRIQCAGAKALATALITNTCLKVLAVQFCEL 326

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
              G   +A++L  N T+T I + GN        A + +L+   ++
Sbjct: 327 KSPGLCALAESLITNNTLTNIYIWGNEHDESTCIAYSNLLETGRLV 372



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 120/235 (51%), Gaps = 5/235 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N I DEG  A+++   +    L  L++  N I+  GA  +A  ++  K LL + +
Sbjct: 92  LDLRYNRIKDEGA-AIIASFLTDDQLLQELNLAGNDITEIGAACIATALRTNKVLLVLKM 150

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN- 453
             N IG  G  ++A AL+ NRT+  IDLG  +       A A +L+ N  I SL+L    
Sbjct: 151 TGNPIGSTGGLRLAQALQVNRTLEFIDLGECDQTITSCIAFATMLQRNKTIKSLNLNRQL 210

Query: 454 --PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
              +  +    ++E+L  +  +  L L    +   GA+ +AD L  N+T+ +LD+ AN +
Sbjct: 211 LWTLQEEPTVHIAEMLCINSTLRELHLSKVDMRDFGAKRLADALERNHTLELLDISANRI 270

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
             +GA  L++   + N +L  +DLAFN I+  GA A+A AL  N  + V ++   
Sbjct: 271 ARDGAIALSRVV-MANCSLVILDLAFNRIQCAGAKALATALITNTCLKVLAVQFC 324


>gi|198431315|ref|XP_002120110.1| PREDICTED: similar to predicted protein isoform 2 [Ciona
           intestinalis]
          Length = 485

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 152/291 (52%), Gaps = 4/291 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+F++VD+  ++    G+   +  + + Q  E ++ + +G+   G KA    L  N ++ 
Sbjct: 67  RSFTAVDIYFKSCEQLGVVPASYFVTHLQ-HEVMNMSHHGLGPNGTKAIAAPLVINTSIL 125

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LN+  N I  EG++ + D+L++N  +  L +S   L  EGA+ + E+L+ N+ LR L +
Sbjct: 126 ELNIEDNWITAEGMRDIADMLMENCYISILNISHNKLGSEGARYVGEMLQENTTLRTLNI 185

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N    S     AEAL +N  ++ L ++GN    LG   + + +  N+++  L+L  N 
Sbjct: 186 SRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCELGGEWMGQAIAANEAIETLNLSWNH 245

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +  +G  A+ +G+ S    +  LD+  N  + +GA  + E +K   +L+W++L  N I D
Sbjct: 246 LRLKGALAVCAGMKSNI-TVKTLDLSWNGFADEGAMAMGEALKTNNTLVWLDLSFNRISD 304

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDL 450
           +G   +A  L+ N T+ T+ +G N    +GA  +   +  N  S I  LDL
Sbjct: 305 KGLTMLAKGLEVNDTLRTLRIGDNPFGEEGALLLINAIFKNEKSAIEDLDL 355



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 131/251 (52%), Gaps = 2/251 (0%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G  A+A  L  N S+ EL++  N I  EG+R +   L      +++L+I +N + ++
Sbjct: 107 GPNGTKAIAAPLVINTSILELNIEDNWITAEGMRDIADMLM-ENCYISILNISHNKLGSE 165

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA +V E ++   +L  +N+  ND  D   +  A+AL+QN  +  +D+ GN     G   
Sbjct: 166 GARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCELGGEW 225

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           + + +  N  I +L+L++N +   GA A+   +K +  + TL L W      GA  + + 
Sbjct: 226 MGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADEGAMAMGEA 285

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L+ NNT+  LDL  N + D+G   LA+  + VN+ L ++ +  N   ++GA  +  A+  
Sbjct: 286 LKTNNTLVWLDLSFNRISDKGLTMLAKGLE-VNDTLRTLRIGDNPFGEEGALLLINAIFK 344

Query: 555 NEDVAVTSLNL 565
           NE  A+  L+L
Sbjct: 345 NEKSAIEDLDL 355



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 3/265 (1%)

Query: 249 ERLQLSSVDLRDEGAKAIA-ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           E + +S   L   G KAIA  L+ N SIL  L + +N I   G   +A+ L+EN  I  L
Sbjct: 97  EVMNMSHHGLGPNGTKAIAAPLVINTSILE-LNIEDNWITAEGMRDIADMLMENCYISIL 155

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +++ N  G+ GA  + + L+ N +LR L++  N   D   +     L  +  +L  LDI 
Sbjct: 156 NISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALR-QNFRLKELDIS 214

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N     G   + + I   +++  +NL  N +  +GA  +   +K N T+ T+DL  N  
Sbjct: 215 GNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGF 274

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             +GA A+   LK N+ +  LDL++N I   G   L++ L+ +  + TL++G    G  G
Sbjct: 275 ADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFGEEG 334

Query: 488 AEFVADMLRYNNTISILDLRANGLR 512
           A  + + +  N   +I DL    +R
Sbjct: 335 ALLLINAIFKNEKSAIEDLDLKSVR 359



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 2/222 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S +++S    G EG  ++ E L  N T   ++ + N    +  + F   L+ N  LK L
Sbjct: 152 ISILNISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKEL 211

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++SGN   + G + +   +  N  +E L LS   LR +GA A+   +K+N  ++ L+L+ 
Sbjct: 212 DISGNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSW 271

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G  ++ EAL  N+T+  L L+ N     G   LAKGLE N +LR L +  N  G
Sbjct: 272 NGFADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFG 331

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF-HVAEYIK 384
           +EG   L++ +  +  K A+ D+   S+     F  +AE ++
Sbjct: 332 EEGALLLINAI-FKNEKSAIEDLDLKSVRVNREFLELAEKLR 372



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 29/222 (13%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           V+++ ++ +   G   +A  +    S+L +N+  N I  EG   IAD L +N  I+ +++
Sbjct: 98  VMNMSHHGLGPNGTKAIAAPLVINTSILELNIEDNWITAEGMRDIADMLMENCYISILNI 157

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK---------FHGN- 472
             N + S+GA  +  +L++N+ + +L+++ N       +  +E L+           GN 
Sbjct: 158 SHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGNE 217

Query: 473 ------------------INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
                             I TL L W  +   GA  V   ++ N T+  LDL  NG  DE
Sbjct: 218 FCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADE 277

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           GA  + ++ K  N  L  +DL+FN I D G   +A+ L+ N+
Sbjct: 278 GAMAMGEALK-TNNTLVWLDLSFNRISDKGLTMLAKGLEVND 318



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 88/175 (50%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL  E  + + E  +E     ++++S  +F D    + AE+L  N   +E+  + N    
Sbjct: 161 KLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCE 220

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +     + +N A++TLNLS N +  +G   +C  +  N  V+ L LS     DEGA 
Sbjct: 221 LGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADEGAM 280

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           A+ E LK N+ L  L+L+ N I   G T LA+ L  N T+R+L +  N  G  GA
Sbjct: 281 AMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFGEEGA 335


>gi|320165657|gb|EFW42556.1| hypothetical protein CAOG_07399 [Capsaspora owczarzaki ATCC 30864]
          Length = 362

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 119/218 (54%), Gaps = 6/218 (2%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L+ N I      ++AEAL  N+T+  L L+ N  G  G  A+A+ L+ N +L  L L GN
Sbjct: 14  LDGNRIGNVEVQAIAEALKVNTTLTQLELSDNQIGHAGTKAIAEALKVNTTLTRLSLSGN 73

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IG  G +A+   L++    L VL +G N +   GA  +AE +K  K+L  ++L +N IG
Sbjct: 74  QIGYAGAQAM--ALTT----LTVLSLGANQLGDSGALAIAEALKANKTLTALDLQLNQIG 127

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             GA+ IA+ALK N T+T + L GN I   GA AIA  LK N+++  L L  N IG  GA
Sbjct: 128 TSGAQAIAEALKVNTTVTYLGLDGNQIGDAGALAIAEALKVNTMLKGLLLYANQIGDVGA 187

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           + ++  L  +  +    L +  IG  G++ + +  + N
Sbjct: 188 QGIAAALMVNTTLKAFPLAYNCIGHLGSQAIDEARKRN 225



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 121/223 (54%), Gaps = 8/223 (3%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           REL L GN IG+  ++A+   L      L  L++ +N I   G   +AE +K   +L  +
Sbjct: 11  REL-LDGNRIGNVEVQAIAEALKVNT-TLTQLELSDNQIGHAGTKAIAEALKVNTTLTRL 68

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG  GA+ +A       T+T + LG N +   GA AIA  LK N  +T+LDL  
Sbjct: 69  SLSGNQIGYAGAQAMALT-----TLTVLSLGANQLGDSGALAIAEALKANKTLTALDLQL 123

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+A++E LK +  +  L L   QIG +GA  +A+ L+ N  +  L L AN + 
Sbjct: 124 NQIGTSGAQAIAEALKVNTTVTYLGLDGNQIGDAGALAIAEALKVNTMLKGLLLYANQIG 183

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           D GA+ +A +  +VN  L +  LA+N I   G+ AI +A K N
Sbjct: 184 DVGAQGIAAAL-MVNTTLKAFPLAYNCIGHLGSQAIDEARKRN 225



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 113/216 (52%), Gaps = 6/216 (2%)

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+GN  G +   A+A+ L+ N +L +L L  N IG  G +A+   L      L  L +  
Sbjct: 14  LDGNRIGNVEVQAIAEALKVNTTLTQLELSDNQIGHAGTKAIAEALKVNT-TLTRLSLSG 72

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA  +A       +L  ++L  N +GD GA  IA+ALK N+T+T +DL  N I 
Sbjct: 73  NQIGYAGAQAMA-----LTTLTVLSLGANQLGDSGALAIAEALKANKTLTALDLQLNQIG 127

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
           + GA AIA  LK N+ +T L L  N IG  GA A++E LK +  +  L L   QIG  GA
Sbjct: 128 TSGAQAIAEALKVNTTVTYLGLDGNQIGDAGALAIAEALKVNTMLKGLLLYANQIGDVGA 187

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           + +A  L  N T+    L  N +   G++ + ++ K
Sbjct: 188 QGIAAALMVNTTLKAFPLAYNCIGHLGSQAIDEARK 223



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 120/244 (49%), Gaps = 10/244 (4%)

Query: 160 ELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           ELR+ +      + G   G+  +  +AE+L  N T  ++  + N I  AG KA    L+ 
Sbjct: 2   ELRSMTERQRELLDGNRIGNVEVQAIAEALKVNTTLTQLELSDNQIGHAGTKAIAEALKV 61

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L  L+LSGN IG  G + +         +  L L +  L D GA AIAE LK N  L
Sbjct: 62  NTTLTRLSLSGNQIGYAGAQAMAL-----TTLTVLSLGANQLGDSGALAIAEALKANKTL 116

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L+L  N I  SG  ++AEAL  N+T+  L L+GN  G  GA A+A+ L+ N  L+ L 
Sbjct: 117 TALDLQLNQIGTSGAQAIAEALKVNTTVTYLGLDGNQIGDAGALAIAEALKVNTMLKGLL 176

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLY 395
           L+ N IGD G + + + L      L    +  N I   G+  + E  K NC  L+ I   
Sbjct: 177 LYANQIGDVGAQGIAAALMVNT-TLKAFPLAYNCIGHLGSQAIDEARKRNCGCLVEIGDQ 235

Query: 396 MNDI 399
           +N +
Sbjct: 236 INPL 239



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 91/160 (56%), Gaps = 8/160 (5%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L GN I +    AIA  LK N+ +T L+L+ N IG  G KA++E LK +  +  L L   
Sbjct: 14  LDGNRIGNVEVQAIAEALKVNTTLTQLELSDNQIGHAGTKAIAEALKVNTTLTRLSLSGN 73

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           QIG +GA+ +A       T+++L L AN L D GA  +A++ K  N+ LT++DL  N+I 
Sbjct: 74  QIGYAGAQAMAL-----TTLTVLSLGANQLGDSGALAIAEALKA-NKTLTALDLQLNQIG 127

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             GA AIA+ALK N    VT L L  N +   G  A+ +A
Sbjct: 128 TSGAQAIAEALKVN--TTVTYLGLDGNQIGDAGALAIAEA 165



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 65/140 (46%)

Query: 158 AKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSN 217
           A  L   + + +     GD G   +AE+L  N+T   +    N I  +G +A    L+ N
Sbjct: 82  AMALTTLTVLSLGANQLGDSGALAIAEALKANKTLTALDLQLNQIGTSGAQAIAEALKVN 141

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
             +  L L GN IGD G   + + L  N  ++ L L +  + D GA+ IA  L  N+ L+
Sbjct: 142 TTVTYLGLDGNQIGDAGALAIAEALKVNTMLKGLLLYANQIGDVGAQGIAAALMVNTTLK 201

Query: 278 VLELNNNMIDYSGFTSLAEA 297
              L  N I + G  ++ EA
Sbjct: 202 AFPLAYNCIGHLGSQAIDEA 221


>gi|395517504|ref|XP_003762916.1| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Sarcophilus harrisii]
          Length = 498

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 135/264 (51%), Gaps = 1/264 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S + +  R  G +G   LA +L  N +   ++ + N +   G  A  G+L+ N  +  L+
Sbjct: 208 SELMLKHRGLGPQGAQALALALMNNTSIVRLNLSDNWLNEEGTVAIAGMLKENCFIADLD 267

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N +G +G K LC  L++N  V RL+LS  DL     K +A+ L  N+ + +L+L++N
Sbjct: 268 LSDNKVGVKGAKALCAALMENTSVRRLRLSGSDLGTHATKDVADALMVNTKMELLDLSHN 327

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           ++D      L  AL EN  I+ L+L+ N+    GA   A+G+  N  LR L L  N  GD
Sbjct: 328 LLDEEAGERLGPALAENIGIKELNLSWNHLRGSGAVIFARGIGLNTYLRVLDLSYNGFGD 387

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           EG  A+   L    G L  L++ NN IS  GA   +E +   ++L  +++  N +  EG 
Sbjct: 388 EGAAAMGEALRV-NGVLEELNMNNNRISLPGALRFSEGLSENRTLRSLSMGRNPMRSEGC 446

Query: 405 EKIADALKQNRTITTIDLGGNNIH 428
             I  A++ N     + L  ++IH
Sbjct: 447 LSILRAVQMNPYSGLMVLDFSDIH 470



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 146/324 (45%), Gaps = 39/324 (12%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L    L  +GA+A+A  L NN+ +  L L++N ++  G  ++A  L EN  I  L L+
Sbjct: 210 LMLKHRGLGPQGAQALALALMNNTSIVRLNLSDNWLNEEGTVAIAGMLKENCFIADLDLS 269

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G  GA AL   L  N S+R L L G+ +G    + +   L     K+ +LD+ +N 
Sbjct: 270 DNKVGVKGAKALCAALMENTSVRRLRLSGSDLGTHATKDVADALMVNT-KMELLDLSHNL 328

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           +                             +E  E++  AL +N  I  ++L  N++   
Sbjct: 329 LD----------------------------EEAGERLGPALAENIGIKELNLSWNHLRGS 360

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA   AR +  N+ +  LDL+YN  G +GA A+ E L+ +G +  L +   +I   GA  
Sbjct: 361 GAVIFARGIGLNTYLRVLDLSYNGFGDEGAAAMGEALRVNGVLEELNMNNNRISLPGALR 420

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
            ++ L  N T+  L +  N +R EG   + ++ + +N     + L F++I  +  F    
Sbjct: 421 FSEGLSENRTLRSLSMGRNPMRSEGCLSILRAVQ-MNPYSGLMVLDFSDIHLNKDF---- 475

Query: 551 ALKANEDVAVTSLNLANNFLTKFG 574
                ED+A +   ++     K G
Sbjct: 476 -----EDLACSMKEVSPQLCIKHG 494



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 115/231 (49%), Gaps = 1/231 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +G +G + L   L++N  + RL LS   L +EG  AIA +LK N  +  L+L++N +   
Sbjct: 217 LGPQGAQALALALMNNTSIVRLNLSDNWLNEEGTVAIAGMLKENCFIADLDLSDNKVGVK 276

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  +L  AL+EN+++R L L+G+  G      +A  L  N  +  L L  N + +E    
Sbjct: 277 GAKALCAALMENTSVRRLRLSGSDLGTHATKDVADALMVNTKMELLDLSHNLLDEEAGER 336

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L   L+   G +  L++  N +   GA   A  I     L  ++L  N  GDEGA  + +
Sbjct: 337 LGPALAENIG-IKELNLSWNHLRGSGAVIFARGIGLNTYLRVLDLSYNGFGDEGAAAMGE 395

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           AL+ N  +  +++  N I   GA   +  L +N  + SL +  NP+ ++G 
Sbjct: 396 ALRVNGVLEELNMNNNRISLPGALRFSEGLSENRTLRSLSMGRNPMRSEGC 446



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 3/183 (1%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G +GA+ +A AL  N +I  ++L  N ++ +G  AIA +LK+N  I  LDL+ N +G  
Sbjct: 217 LGPQGAQALALALMNNTSIVRLNLSDNWLNEEGTVAIAGMLKENCFIADLDLSDNKVGVK 276

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GAKAL   L  + ++  L+L    +G    + VAD L  N  + +LDL  N L +E  + 
Sbjct: 277 GAKALCAALMENTSVRRLRLSGSDLGTHATKDVADALMVNTKMELLDLSHNLLDEEAGER 336

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           L  +    N  +  ++L++N +R  GA   A+ +  N  + V  L+L+ N     G +A+
Sbjct: 337 LGPAL-AENIGIKELNLSWNHLRGSGAVIFARGIGLNTYLRV--LDLSYNGFGDEGAAAM 393

Query: 579 TDA 581
            +A
Sbjct: 394 GEA 396



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 35/284 (12%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L    +G +G +AL   L +    +  L++ +N ++ +G   +A  +K    +  ++
Sbjct: 209 ELMLKHRGLGPQGAQALALALMNNT-SIVRLNLSDNWLNEEGTVAIAGMLKENCFIADLD 267

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N +G +GA+ +  AL +N ++  + L G+++ +     +A  L  N+ +  LDL++N
Sbjct: 268 LSDNKVGVKGAKALCAALMENTSVRRLRLSGSDLGTHATKDVADALMVNTKMELLDLSHN 327

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +  +  + L   L  +  I  L L W  +  SGA   A  +  N  + +LDL  NG  D
Sbjct: 328 LLDEEAGERLGPALAENIGIKELNLSWNHLRGSGAVIFARGIGLNTYLRVLDLSYNGFGD 387

Query: 514 EGAKCLAQSFKV---------------------------VNEALTSIDLAFNEIRDDGAF 546
           EGA  + ++ +V                            N  L S+ +  N +R +G  
Sbjct: 388 EGAAAMGEALRVNGVLEELNMNNNRISLPGALRFSEGLSENRTLRSLSMGRNPMRSEGCL 447

Query: 547 AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
           +I +A++ N    +  L+ ++  L K       D +DL   M E
Sbjct: 448 SILRAVQMNPYSGLMVLDFSDIHLNK-------DFEDLACSMKE 484


>gi|320166990|gb|EFW43889.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 625

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 118/196 (60%), Gaps = 3/196 (1%)

Query: 364 LDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           LD+  N I+  GA  +AE ++ NC +L  ++L  N IGD GA  IA+ LK N+T+  +DL
Sbjct: 53  LDLSGNLIADVGARAIAEAVRANC-TLTVVDLTENRIGDAGARAIAETLKVNKTLIDLDL 111

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I + GA AIA  LK N  +  L LA NPIG DGA+A+++ LK +  +  L L   Q
Sbjct: 112 NDNQIGAAGAQAIADGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLWENQ 171

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           I  +GA+ +A++L+ N T++ LD+ +N + D GA+ +A++ K VNE LT +DL  N +  
Sbjct: 172 ITCTGAQALAEVLKANTTLTELDMGSNQIGDAGARAIAEALK-VNETLTELDLNENFLTT 230

Query: 543 DGAFAIAQALKANEDV 558
           DG     Q   A  DV
Sbjct: 231 DGIATFRQTGNAICDV 246



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 98/184 (53%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+SG    D G   +AE++  N T   V    N I  AG +A    L+ N  L  L
Sbjct: 50  MTELDLSGNLIADVGARAIAEAVRANCTLTVVDLTENRIGDAGARAIAETLKVNKTLIDL 109

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+ N IG  G + + D L  N  +  L L+   + D+GA+AIA+ LK N+ L  L L  
Sbjct: 110 DLNDNQIGAAGAQAIADGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLWE 169

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  +LAE L  N+T+  L +  N  G  GA A+A+ L+ N++L EL L+ N + 
Sbjct: 170 NQITCTGAQALAEVLKANTTLTELDMGSNQIGDAGARAIAEALKVNETLTELDLNENFLT 229

Query: 344 DEGI 347
            +GI
Sbjct: 230 TDGI 233



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 114/227 (50%), Gaps = 3/227 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E +Q L  F +   A   +D+  +  G+     +AE++  N T  E+  + N I   G +
Sbjct: 9   EKQQQL--FDEVKHASQQLDLCKQQIGNAEAKAIAEAIKVNTTMTELDLSGNLIADVGAR 66

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    +++N  L  ++L+ N IGD G + + + L  N  +  L L+   +   GA+AIA+
Sbjct: 67  AIAEAVRANCTLTVVDLTENRIGDAGARAIAETLKVNKTLIDLDLNDNQIGAAGAQAIAD 126

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LK N  L  L L  N I   G  ++A+AL  N+T+  L+L  N     GA ALA+ L+ 
Sbjct: 127 GLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLWENQITCTGAQALAEVLKA 186

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           N +L EL +  N IGD G RA+   L   +  L  LD+  N ++  G
Sbjct: 187 NTTLTELDMGSNQIGDAGARAIAEALKVNE-TLTELDLNENFLTTDG 232



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 54/111 (48%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           + L  N+T  E+S A N I   G +A    L+ N  L  L L  N I   G + L ++L 
Sbjct: 126 DGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLWENQITCTGAQALAEVLK 185

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            N  +  L + S  + D GA+AIAE LK N  L  L+LN N +   G  + 
Sbjct: 186 ANTTLTELDMGSNQIGDAGARAIAEALKVNETLTELDLNENFLTTDGIATF 236


>gi|344308889|ref|XP_003423109.1| PREDICTED: ribonuclease inhibitor-like [Loxodonta africana]
          Length = 456

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 184/397 (46%), Gaps = 8/397 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + ++L G      ++S     +TAA      G L+    L 
Sbjct: 52  SLTELSLHNSELGDAGVCQVLQALQGPACKICKLSLQNCSLTAACCTVLPGTLRWLPTLL 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L LS NP+GDEG++ LC+ L D    +ER+QL   +L     + +A +L     LR L 
Sbjct: 112 ELRLSDNPLGDEGLQLLCEGLRDPQCHLERVQLEYCNLTAASCEPLAAVLPAKLGLRELV 171

Query: 281 LNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           L+NN +  +G   L   LL     + +L L      A     L   +    SL+EL L  
Sbjct: 172 LSNNDLGEAGVQVLCRGLLGATCPLETLKLASCGVTAANCKDLCSIVATKDSLQELDLGE 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           + +GD G+ AL  GL S   KL  L +    IS++G   +++ ++  +SL  ++L  N++
Sbjct: 232 SKLGDAGMAALCPGLLSPSSKLKTLWLWECDISSEGCREISQVLRAKESLKELSLMGNEL 291

Query: 400 GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GD+GA  + +AL++    + ++ +             + +L  N  +  L L+ N +G  
Sbjct: 292 GDQGARLLCEALREPGCRLESLWVKACGFTDACCPDFSTMLAQNKFLLELQLSNNKLGDT 351

Query: 459 GAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G  +  L LG C +  SG   +A +L  + ++  LDL  N + D G  
Sbjct: 352 GVQQLCQGLSQPGATLQMLCLGDCDVTDSGCTALASLLLSSRSLRELDLSNNCMGDAGVL 411

Query: 518 CLAQSFKVVNEALTSI---DLAFNEIRDDGAFAIAQA 551
            L +S +    AL  +   D   +E  DD   A+ ++
Sbjct: 412 QLVESLRQPGCALQQLVLYDTYLSEAVDDSLQALEES 448



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 150/369 (40%), Gaps = 10/369 (2%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           E L   Q  E +     G+T A  K     LQ+N +L  L+L  + +GD GV   C +L 
Sbjct: 17  ELLPRIQQVEVIRLDDCGLTEARCKDISSALQANPSLTELSLHNSELGDAGV---CQVLQ 73

Query: 244 DNAG----VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
              G    + +L L +  L       +   L+    L  L L++N +   G   L E L 
Sbjct: 74  ALQGPACKICKLSLQNCSLTAACCTVLPGTLRWLPTLLELRLSDNPLGDEGLQLLCEGLR 133

Query: 300 ENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           +    +  + L      A     LA  L     LREL L  N +G+ G++ L  GL    
Sbjct: 134 DPQCHLERVQLEYCNLTAASCEPLAAVLPAKLGLRELVLSNNDLGEAGVQVLCRGLLGAT 193

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTI 417
             L  L + +  ++A     +   +    SL  ++L  + +GD G   +    L  +  +
Sbjct: 194 CPLETLKLASCGVTAANCKDLCSIVATKDSLQELDLGESKLGDAGMAALCPGLLSPSSKL 253

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTL 476
            T+ L   +I S+G   I++VL+    +  L L  N +G  GA+ L E L+  G  + +L
Sbjct: 254 KTLWLWECDISSEGCREISQVLRAKESLKELSLMGNELGDQGARLLCEALREPGCRLESL 313

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            +  C    +     + ML  N  +  L L  N L D G + L Q        L  + L 
Sbjct: 314 WVKACGFTDACCPDFSTMLAQNKFLLELQLSNNKLGDTGVQQLCQGLSQPGATLQMLCLG 373

Query: 537 FNEIRDDGA 545
             ++ D G 
Sbjct: 374 DCDVTDSGC 382



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 4/262 (1%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  L+ N SL EL LH + +GD G+  ++  L     K+  L + N S++A     +  
Sbjct: 43  ISSALQANPSLTELSLHNSELGDAGVCQVLQALQGPACKICKLSLQNCSLTAACCTVLPG 102

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLK 440
            ++   +LL + L  N +GDEG + + + L+  +  +  + L   N+ +     +A VL 
Sbjct: 103 TLRWLPTLLELRLSDNPLGDEGLQLLCEGLRDPQCHLERVQLEYCNLTAASCEPLAAVLP 162

Query: 441 DNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
               +  L L+ N +G  G + L   +L     + TLKL  C + A+  + +  ++   +
Sbjct: 163 AKLGLRELVLSNNDLGEAGVQVLCRGLLGATCPLETLKLASCGVTAANCKDLCSIVATKD 222

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
           ++  LDL  + L D G   L       +  L ++ L   +I  +G   I+Q L+A E  +
Sbjct: 223 SLQELDLGESKLGDAGMAALCPGLLSPSSKLKTLWLWECDISSEGCREISQVLRAKE--S 280

Query: 560 VTSLNLANNFLTKFGQSALTDA 581
           +  L+L  N L   G   L +A
Sbjct: 281 LKELSLMGNELGDQGARLLCEA 302


>gi|123478687|ref|XP_001322505.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121905352|gb|EAY10282.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 547

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 159/342 (46%), Gaps = 29/342 (8%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD--------------------- 240
           I  AG+KA    L  N  L  L+L     G+EG   L D                     
Sbjct: 145 IGDAGVKAIAFALTKNRTLSGLDLINCKCGEEGAAELSDALLNNTTLTTLLLQDRFEAKV 204

Query: 241 ------ILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
                 +L D N  ++ L L S ++  +  + + E LKNN  L  L L+ N ++      
Sbjct: 205 IYSLGSMLSDANCRLQALYLWSCNITTDLLQKLCESLKNNRCLTTLALSYNKLNDDAAYY 264

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           ++  +LEN +I  LHL  N      ++  +  L  N +L+ L +  N I  EG+  L   
Sbjct: 265 ISRMILENRSITKLHLGANKFTRSASSYFSICLNKNTTLQYLDISRNVIASEGLWPLSVA 324

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           LS  K +L  LD+ +NSI  +GA   ++  +  +S++ + L  N  GD     +A  LK 
Sbjct: 325 LSGNK-ELKFLDLRHNSIDFRGAAMFSDLFEQNESIMTLRLSGNKFGDPSIALMASKLKM 383

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N++I  ++L   ++  KG +AI   LK+N  +  L ++ N + ++  K+L E+LK +  +
Sbjct: 384 NKSIKVLELMDVDMTKKGFTAICHALKENKTLQKLTVSQNNLNSEAMKSLCELLKVNTTL 443

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           N++ +  C I   G  ++A+ +  N ++S LD+  N     G
Sbjct: 444 NSISMSGCGIDDQGCAYIAEGIGSNASLSYLDISMNNFTVNG 485



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 164/376 (43%), Gaps = 36/376 (9%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL--- 270
           L +N  +  ++L  N I       + D+L  +  +  L++   D+ DE  + ++ +L   
Sbjct: 41  LNANSFIAKISLQKNQISKRICMRIFDLLKAHPKLTHLEIIDNDVDDESIEHLSNVLISL 100

Query: 271 --KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN-YGGALGANALAKGLE 327
               +SI+ +L    N  D  G  +LA A+ +N+ +  L L GN + G  G  A+A  L 
Sbjct: 101 PPNRDSIMLILR--KNSFDIRGARALARAIEKNAPVVWLDLRGNDHIGDAGVKAIAFALT 158

Query: 328 GNKSLRELHLHGNSIGDEG---------------------------IRALMSGLSSRKGK 360
            N++L  L L     G+EG                           I +L S LS    +
Sbjct: 159 KNRTLSGLDLINCKCGEEGAAELSDALLNNTTLTTLLLQDRFEAKVIYSLGSMLSDANCR 218

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  L + + +I+      + E +KN + L  + L  N + D+ A  I+  + +NR+IT +
Sbjct: 219 LQALYLWSCNITTDLLQKLCESLKNNRCLTTLALSYNKLNDDAAYYISRMILENRSITKL 278

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            LG N      +S  +  L  N+ +  LD++ N I ++G   LS  L  +  +  L L  
Sbjct: 279 HLGANKFTRSASSYFSICLNKNTTLQYLDISRNVIASEGLWPLSVALSGNKELKFLDLRH 338

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
             I   GA   +D+   N +I  L L  N   D     +A   K +N+++  ++L   ++
Sbjct: 339 NSIDFRGAAMFSDLFEQNESIMTLRLSGNKFGDPSIALMASKLK-MNKSIKVLELMDVDM 397

Query: 541 RDDGAFAIAQALKANE 556
              G  AI  ALK N+
Sbjct: 398 TKKGFTAICHALKENK 413



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 173/395 (43%), Gaps = 38/395 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + ++NL    + D     L D L  N+ + ++ L    +       I +LLK +  L  L
Sbjct: 19  INSINLVNVRMDDIIADKLIDALNANSFIAKISLQKNQISKRICMRIFDLLKAHPKLTHL 78

Query: 280 ELNNNMIDYSGFTSLAEALLE---NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           E+ +N +D      L+  L+    N     L L  N     GA ALA+ +E N  +  L 
Sbjct: 79  EIIDNDVDDESIEHLSNVLISLPPNRDSIMLILRKNSFDIRGARALARAIEKNAPVVWLD 138

Query: 337 LHGNS-IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK----------- 384
           L GN  IGD G++A+   L+  +  L+ LD+ N     +GA  +++ +            
Sbjct: 139 LRGNDHIGDAGVKAIAFALTKNR-TLSGLDLINCKCGEEGAAELSDALLNNTTLTTLLLQ 197

Query: 385 ------------------NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
                             NC+ L  + L+  +I  +  +K+ ++LK NR +TT+ L  N 
Sbjct: 198 DRFEAKVIYSLGSMLSDANCR-LQALYLWSCNITTDLLQKLCESLKNNRCLTTLALSYNK 256

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           ++   A  I+R++ +N  IT L L  N      +   S  L  +  +  L +    I + 
Sbjct: 257 LNDDAAYYISRMILENRSITKLHLGANKFTRSASSYFSICLNKNTTLQYLDISRNVIASE 316

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
           G   ++  L  N  +  LDLR N +   GA   +  F+  NE++ ++ L+ N+  D    
Sbjct: 317 GLWPLSVALSGNKELKFLDLRHNSIDFRGAAMFSDLFE-QNESIMTLRLSGNKFGDPSIA 375

Query: 547 AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            +A  LK N+ + V  L L +  +TK G +A+  A
Sbjct: 376 LMASKLKMNKSIKV--LELMDVDMTKKGFTAICHA 408



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 92/188 (48%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S      EGL+ L+ +L  N+  + +    N I   G   F  + + N ++ TL LS
Sbjct: 306 LDISRNVIASEGLWPLSVALSGNKELKFLDLRHNSIDFRGAAMFSDLFEQNESIMTLRLS 365

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN  GD  +  +   L  N  ++ L+L  VD+  +G  AI   LK N  L+ L ++ N +
Sbjct: 366 GNKFGDPSIALMASKLKMNKSIKVLELMDVDMTKKGFTAICHALKENKTLQKLTVSQNNL 425

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
           +     SL E L  N+T+ S+ ++G      G   +A+G+  N SL  L +  N+    G
Sbjct: 426 NSEAMKSLCELLKVNTTLNSISMSGCGIDDQGCAYIAEGIGSNASLSYLDISMNNFTVNG 485

Query: 347 IRALMSGL 354
           +  +++ L
Sbjct: 486 MNKILNAL 493



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 133/314 (42%), Gaps = 42/314 (13%)

Query: 130 WSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYN 189
           WS    T+LL            Q L E  K  R  +++ +S     D+  ++++  +  N
Sbjct: 225 WSCNITTDLL------------QKLCESLKNNRCLTTLALSYNKLNDDAAYYISRMILEN 272

Query: 190 QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLC---------- 239
           ++  ++   AN  T +    F   L  N  L+ L++S N I  EG+  L           
Sbjct: 273 RSITKLHLGANKFTRSASSYFSICLNKNTTLQYLDISRNVIASEGLWPLSVALSGNKELK 332

Query: 240 ------------------DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
                             D+   N  +  L+LS     D     +A  LK N  ++VLEL
Sbjct: 333 FLDLRHNSIDFRGAAMFSDLFEQNESIMTLRLSGNKFGDPSIALMASKLKMNKSIKVLEL 392

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +  +   GFT++  AL EN T++ L ++ N   +    +L + L+ N +L  + + G  
Sbjct: 393 MDVDMTKKGFTAICHALKENKTLQKLTVSQNNLNSEAMKSLCELLKVNTTLNSISMSGCG 452

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I D+G   +  G+ S    L+ LDI  N+ +  G   +   +    SLL I+   N   D
Sbjct: 453 IDDQGCAYIAEGIGS-NASLSYLDISMNNFTVNGMNKILNALLGNFSLLKIDYNNNTNND 511

Query: 402 EG-AEKIADALKQN 414
           +   +KIAD L++N
Sbjct: 512 QNLGDKIADYLERN 525


>gi|320165465|gb|EFW42364.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 348

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 109/184 (59%), Gaps = 1/184 (0%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  L + NN +   GA  +AE +K   +L  + L  N IG+ GA+ IA+AL+ N T+T++
Sbjct: 8   LFTLCLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSL 67

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L  N I   GA AIA  LK N+ +T L LA NPIG    +A++E L+ +  +  L L  
Sbjct: 68  SLNENRIGEAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWE 127

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            QI  +GA+ +A+ L+ N T++ LD+ +N + D GA+ +A++ K VNE LT + L  N +
Sbjct: 128 NQITCTGAQALAEALKANTTLTELDMGSNQIGDVGARAIAEALK-VNETLTELLLYENFL 186

Query: 541 RDDG 544
             DG
Sbjct: 187 TTDG 190



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 111/201 (55%), Gaps = 3/201 (1%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           +L  + L+ N +GD GA  IA+ LK N T+  + L  N I   GA AIA  L+ N+ +TS
Sbjct: 7   NLFTLCLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTS 66

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L L  N IG  GA+A+++ LK +  +  L L    IG    + +A+ L  N T++ L L 
Sbjct: 67  LSLNENRIGEAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLW 126

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
            N +   GA+ LA++ K  N  LT +D+  N+I D GA AIA+ALK NE   +T L L  
Sbjct: 127 ENQITCTGAQALAEALK-ANTTLTELDMGSNQIGDVGARAIAEALKVNE--TLTELLLYE 183

Query: 568 NFLTKFGQSALTDAKDLVYEM 588
           NFLT  G +      + + E+
Sbjct: 184 NFLTTDGVATFRQTGNAICEL 204



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 1/184 (0%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL L  N +GD G   + ++L  N  ++ L L+   + + GA+AIAE L+ N+ +  L
Sbjct: 8   LFTLCLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSL 67

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            LN N I  +G  ++A+AL  N+T+  L L  N  G +   A+A+ LE N +L EL+L  
Sbjct: 68  SLNENRIGEAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWE 127

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I   G +AL   L +    L  LD+G+N I   GA  +AE +K  ++L  + LY N +
Sbjct: 128 NQITCTGAQALAEALKANT-TLTELDMGSNQIGDVGARAIAEALKVNETLTELLLYENFL 186

Query: 400 GDEG 403
             +G
Sbjct: 187 TTDG 190



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 95/174 (54%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE L  N T + +  A N I  AG +A    L+ N  + +L+L+ N IG+ 
Sbjct: 18  LGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSLSLNENRIGEA 77

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + D L  N  +  L L+   + D   +AIAE L+ N+ L  L L  N I  +G  +
Sbjct: 78  GAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWENQITCTGAQA 137

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
           LAEAL  N+T+  L +  N  G +GA A+A+ L+ N++L EL L+ N +  +G+
Sbjct: 138 LAEALKANTTLTELDMGSNQIGDVGARAIAEALKVNETLTELLLYENFLTTDGV 191



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 83/155 (53%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +  AG  A   VL+ N  LK L L+ N IG+ G + + + L  N  +  L L+   + 
Sbjct: 16  NKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSLSLNENRIG 75

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           + GA+AIA+ LK N+ L  L L  N I      ++AEAL  N+T+  L+L  N     GA
Sbjct: 76  EAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWENQITCTGA 135

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
            ALA+ L+ N +L EL +  N IGD G RA+   L
Sbjct: 136 QALAEALKANTTLTELDMGSNQIGDVGARAIAEAL 170



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 3/122 (2%)

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
           F  N+ TL L   ++G +GA  +A++L+ N T+  L L  N + + GA+ +A++ + VN 
Sbjct: 4   FPWNLFTLCLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALE-VNT 62

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEM 588
            +TS+ L  N I + GA AIA ALK N    +T L LA N +      A+ +A ++   +
Sbjct: 63  TMTSLSLNENRIGEAGAQAIADALKVN--TTLTDLVLAKNPIGDVAVQAIAEALEVNTTL 120

Query: 589 SE 590
           +E
Sbjct: 121 TE 122


>gi|194038603|ref|XP_001925999.1| PREDICTED: uncharacterized protein C14orf166B homolog [Sus scrofa]
          Length = 486

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 149/288 (51%), Gaps = 9/288 (3%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++  L L  N I +EGI +L+  L      L  ++I
Sbjct: 93  VNLNHHGLGPYGTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENY-YLQEMNI 151

Query: 367 GNNSISAKGAFHVAEYIKN-CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN++  +GA  ++E+++N   SL  + L  N+  +E AE    AL  N  I T+DL  N
Sbjct: 152 SNNNLGLEGARILSEFLQNNTSSLFSLRLSGNNFKEESAELFCQALSVNYRIRTLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            +  K    + ++L  NS + SLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 212 QLSDKAGEYLGQMLALNSGLQSLDLSWNHFCIHGAVALCNGLRVNVALKKLDLSMNSFGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + ++LR N++++ LD+  N + +EG   L++  + VNE+L  + L  N I  DGA
Sbjct: 272 EGASALGEVLRLNSSLAYLDVSCNDISNEGITKLSKGLE-VNESLKVLKLFLNPISMDGA 330

Query: 546 FAIAQALKAN-----EDVAVTSLNLANNFLTKFGQ-SALTDAKDLVYE 587
             +  ++K N     ED+ ++++ ++  F+       A+    D++Y+
Sbjct: 331 LLLILSIKRNPKSKMEDIDISNVLVSEQFVKTLDSVCAIHPQLDVLYK 378



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 137/262 (52%), Gaps = 2/262 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           V+++    G  G   +A +L  N T   +  A N I   GI +   +LQ N  L+ +N+S
Sbjct: 93  VNLNHHGLGPYGTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENYYLQEMNIS 152

Query: 227 GNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N +G EG + L + L +N + +  L+LS  + ++E A+   + L  N  +R L+L++N 
Sbjct: 153 NNNLGLEGARILSEFLQNNTSSLFSLRLSGNNFKEESAELFCQALSVNYRIRTLDLSHNQ 212

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +       L + L  NS ++SL L+ N+    GA AL  GL  N +L++L L  NS G+E
Sbjct: 213 LSDKAGEYLGQMLALNSGLQSLDLSWNHFCIHGAVALCNGLRVNVALKKLDLSMNSFGNE 272

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL   L      LA LD+  N IS +G   +++ ++  +SL  + L++N I  +GA 
Sbjct: 273 GASALGEVL-RLNSSLAYLDVSCNDISNEGITKLSKGLEVNESLKVLKLFLNPISMDGAL 331

Query: 406 KIADALKQNRTITTIDLGGNNI 427
            +  ++K+N      D+  +N+
Sbjct: 332 LLILSIKRNPKSKMEDIDISNV 353



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 137/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN  + TL L+ N I +EG+  L ++L +N  +
Sbjct: 87  NMEEPYVNLNHHGLGPYGTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+ +L  EGA+ ++E L+NN S L  L L+ N           +AL  N  IR+L
Sbjct: 147 QEMNISNNNLGLEGARILSEFLQNNTSSLFSLRLSGNNFKEESAELFCQALSVNYRIRTL 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N         L + L  N  L+ L L  N     G  AL +GL      L  LD+ 
Sbjct: 207 DLSHNQLSDKAGEYLGQMLALNSGLQSLDLSWNHFCIHGAVALCNGLRVNVA-LKKLDLS 265

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NS   +GA  + E ++   SL ++++  NDI +EG  K++  L+ N ++  + L  N I
Sbjct: 266 MNSFGNEGASALGEVLRLNSSLAYLDVSCNDISNEGITKLSKGLEVNESLKVLKLFLNPI 325

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              GA  +   +K N  S +  +D++   +     K L  V   H  ++ L
Sbjct: 326 SMDGALLLILSIKRNPKSKMEDIDISNVLVSEQFVKTLDSVCAIHPQLDVL 376



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 5/205 (2%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N T+ T++L  N I  +G  +
Sbjct: 77  GVVPVSYFIRNMEEP-YVNLNHHGLGPYGTKAIAIALVSNTTVLTLELADNCIMEEGILS 135

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVAD 493
           +  +L++N  +  ++++ N +G +GA+ LSE L+ +  ++ +L+L         AE    
Sbjct: 136 LVEMLQENYYLQEMNISNNNLGLEGARILSEFLQNNTSSLFSLRLSGNNFKEESAELFCQ 195

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L  N  I  LDL  N L D+  + L Q    +N  L S+DL++N     GA A+   L+
Sbjct: 196 ALSVNYRIRTLDLSHNQLSDKAGEYLGQML-ALNSGLQSLDLSWNHFCIHGAVALCNGLR 254

Query: 554 ANEDVAVTSLNLANNFLTKFGQSAL 578
            N  VA+  L+L+ N     G SAL
Sbjct: 255 VN--VALKKLDLSMNSFGNEGASAL 277



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 30/228 (13%)

Query: 149 ESKQTLNEFAKE-LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + L+EF +    +  S+ +SG NF +E      ++L  N     +  + N ++    
Sbjct: 159 EGARILSEFLQNNTSSLFSLRLSGNNFKEESAELFCQALSVNYRIRTLDLSHNQLSDKAG 218

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N  L++L+LS N     G   LC+ L  N  +++L LS     +EGA A+ 
Sbjct: 219 EYLGQMLALNSGLQSLDLSWNHFCIHGAVALCNGLRVNVALKKLDLSMNSFGNEGASALG 278

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E+L+ NS L  L+++ N I   G T                             L+KGLE
Sbjct: 279 EVLRLNSSLAYLDVSCNDISNEGITK----------------------------LSKGLE 310

Query: 328 GNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
            N+SL+ L L  N I  +G +  ++S   + K K+  +DI N  +S +
Sbjct: 311 VNESLKVLKLFLNPISMDGALLLILSIKRNPKSKMEDIDISNVLVSEQ 358


>gi|351709019|gb|EHB11938.1| Nucleotide-binding oligomerization domain-containing protein 1
           [Heterocephalus glaber]
          Length = 953

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 126/240 (52%), Gaps = 7/240 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L   LS    +L VL +  N I+  G   + E +   K L ++ LY N I D GA 
Sbjct: 719 GVRELQPCLS----RLVVLRLSVNQITDNGVKALCEELTKYKILTFLGLYSNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L++ + +T + LG N I S+G   +A  +K+++ I+ L +  N IG +GAKA +E
Sbjct: 775 YVARILEECKGLTHLKLGKNKITSEGGKCLALAVKNSTWISDLGMWGNKIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I + G + +A  L++N ++SI  L  N L DE A+  A+  K 
Sbjct: 835 ALRNHPSLTFLSLAFNGISSEGGKSLAKALQHNTSLSIFWLTQNELNDEVAESFAEMLK- 893

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
           VN+ L  + L  N+I   G   +A+AL+  E+  +T + L  N +         + K LV
Sbjct: 894 VNQTLKHLWLIQNQITAKGTTQLAEALR--ENTGITEICLNGNLIKPEEAKVFEEEKRLV 951



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 113/246 (45%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L LS N I D GVK LC+ L     +  L L S  + D GA+ +A +L+    L  L
Sbjct: 730 LVVLRLSVNQITDNGVKALCEELTKYKILTFLGLYSNQITDVGARYVARILEECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G   LA A+  ++ I  L + GN  G  GA A A+ L  + SL  L L  
Sbjct: 790 KLGKNKITSEGGKCLALAVKNSTWISDLGMWGNKIGDEGAKAFAEALRNHPSLTFLSLAF 849

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  EG ++L   L             N S+                S+ W+    N++
Sbjct: 850 NGISSEGGKSLAKALQH-----------NTSL----------------SIFWLT--QNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE  A+ LK N+T+  + L  N I +KG + +A  L++N+ IT + L  N I  + 
Sbjct: 881 NDEVAESFAEMLKVNQTLKHLWLIQNQITAKGTTQLAEALRENTGITEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   E
Sbjct: 941 AKVFEE 946



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 35/264 (13%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L VL L+ N I  +G  +L E L +   +  L L  N    +GA  +A+ 
Sbjct: 720 VRELQPCLSRLVVLRLSVNQITDNGVKALCEELTKYKILTFLGLYSNQITDVGARYVARI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           LE  K L  L L  N I  EG            GK   L + N++               
Sbjct: 780 LEECKGLTHLKLGKNKITSEG------------GKCLALAVKNST--------------- 812

Query: 386 CKSLLWIN---LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                WI+   ++ N IGDEGA+  A+AL+ + ++T + L  N I S+G  ++A+ L+ N
Sbjct: 813 -----WISDLGMWGNKIGDEGAKAFAEALRNHPSLTFLSLAFNGISSEGGKSLAKALQHN 867

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + ++   L  N +  + A++ +E+LK +  +  L L   QI A G   +A+ LR N  I+
Sbjct: 868 TSLSIFWLTQNELNDEVAESFAEMLKVNQTLKHLWLIQNQITAKGTTQLAEALRENTGIT 927

Query: 503 ILDLRANGLRDEGAKCLAQSFKVV 526
            + L  N ++ E AK   +  ++V
Sbjct: 928 EICLNGNLIKPEEAKVFEEEKRLV 951



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 89/200 (44%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L E L   +    +   +N IT  G +    +L+    L  L L  N
Sbjct: 735 LSVNQITDNGVKALCEELTKYKILTFLGLYSNQITDVGARYVARILEECKGLTHLKLGKN 794

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG KCL   + ++  +  L +    + DEGAKA AE L+N+  L  L L  N I  
Sbjct: 795 KITSEGGKCLALAVKNSTWISDLGMWGNKIGDEGAKAFAEALRNHPSLTFLSLAFNGISS 854

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  SLA+AL  N+++    L  N      A + A+ L+ N++L+ L L  N I  +G  
Sbjct: 855 EGGKSLAKALQHNTSLSIFWLTQNELNDEVAESFAEMLKVNQTLKHLWLIQNQITAKGTT 914

Query: 349 ALMSGLSSRKGKLAVLDIGN 368
            L   L    G   +   GN
Sbjct: 915 QLAEALRENTGITEICLNGN 934



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 83/170 (48%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A  L   +    +    N IT+ G K     ++++  +  L + GN IGDEG 
Sbjct: 770 DVGARYVARILEECKGLTHLKLGKNKITSEGGKCLALAVKNSTWISDLGMWGNKIGDEGA 829

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L ++  +  L L+   +  EG K++A+ L++N+ L +  L  N ++     S A
Sbjct: 830 KAFAEALRNHPSLTFLSLAFNGISSEGGKSLAKALQHNTSLSIFWLTQNELNDEVAESFA 889

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T++ L L  N   A G   LA+ L  N  + E+ L+GN I  E
Sbjct: 890 EMLKVNQTLKHLWLIQNQITAKGTTQLAEALRENTGITEICLNGNLIKPE 939



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 77/154 (50%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           +E +  + + +       EG   LA ++  +    ++    N I   G KAF   L+++ 
Sbjct: 781 EECKGLTHLKLGKNKITSEGGKCLALAVKNSTWISDLGMWGNKIGDEGAKAFAEALRNHP 840

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           +L  L+L+ N I  EG K L   L  N  +    L+  +L DE A++ AE+LK N  L+ 
Sbjct: 841 SLTFLSLAFNGISSEGGKSLAKALQHNTSLSIFWLTQNELNDEVAESFAEMLKVNQTLKH 900

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L L  N I   G T LAEAL EN+ I  + LNGN
Sbjct: 901 LWLIQNQITAKGTTQLAEALRENTGITEICLNGN 934


>gi|281344854|gb|EFB20438.1| hypothetical protein PANDA_019718 [Ailuropoda melanoleuca]
          Length = 429

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 170/378 (44%), Gaps = 6/378 (1%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLR 259
           G+T    K     LQ+N +L  L+L  N +GD GV  +   L      + +L L +  L 
Sbjct: 8   GLTEMRCKDISSALQANPSLTELSLCTNELGDAGVHLVLQGLQSPTCKIRKLSLQNCCLT 67

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALG 318
             G   + ++L++   LR L LN+N +  +G   L   LL+    +  L +      A  
Sbjct: 68  KTGCGVLPDMLRSMPTLRELYLNDNPLGDAGLQLLCSGLLDPQCHLEKLQVEYCNLTAAS 127

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             +LA  L   +  +EL +  N +G+ G+R L  GL     +L VL + N  +++     
Sbjct: 128 CESLASALRAKRHFKELAVSNNELGEAGVRVLCRGLVDSACQLEVLKLENCGLTSASCED 187

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIAD-ALKQNRTITTIDLGGNNIHSKGASAIAR 437
           +   + +  SL  ++L  N +GD+G   +    L  +  I  + L   +I + G   + R
Sbjct: 188 LCGVVASKPSLQELDLGDNKLGDQGIATLCPRLLHPSCQIRVLWLWDCDITTAGCRDLCR 247

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           VL+    +  + LA N +G +GA+ L E +L+    + +L +  C   A+  +  + ML 
Sbjct: 248 VLRAKESLKEMSLAGNALGDEGARLLCESLLEPACQLQSLWVKSCSFTAASCQHFSSMLT 307

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            N  +  L L  N L D G + L Q       AL  + L   ++   G  ++A  L  N 
Sbjct: 308 RNTCLVELQLSNNKLGDCGVQQLCQGLSQPGAALQVLWLGDCDVAHSGCASLASVLLVNR 367

Query: 557 DVAVTSLNLANNFLTKFG 574
             ++  L+L+NN + + G
Sbjct: 368 --SLRELDLSNNCMGEEG 383



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 151/325 (46%), Gaps = 4/325 (1%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
            L +  + +     + ++    GD GL  L   L   Q   E++      +TAA  ++  
Sbjct: 73  VLPDMLRSMPTLRELYLNDNPLGDAGLQLLCSGLLDPQCHLEKLQVEYCNLTAASCESLA 132

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELL 270
             L++    K L +S N +G+ GV+ LC  LVD+A  +E L+L +  L     + +  ++
Sbjct: 133 SALRAKRHFKELAVSNNELGEAGVRVLCRGLVDSACQLEVLKLENCGLTSASCEDLCGVV 192

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGN 329
            +   L+ L+L +N +   G  +L   LL  S  IR L L        G   L + L   
Sbjct: 193 ASKPSLQELDLGDNKLGDQGIATLCPRLLHPSCQIRVLWLWDCDITTAGCRDLCRVLRAK 252

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +SL+E+ L GN++GDEG R L   L     +L  L + + S +A    H +  +     L
Sbjct: 253 ESLKEMSLAGNALGDEGARLLCESLLEPACQLQSLWVKSCSFTAASCQHFSSMLTRNTCL 312

Query: 390 LWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           + + L  N +GD G +++   L Q    +  + LG  ++   G +++A VL  N  +  L
Sbjct: 313 VELQLSNNKLGDCGVQQLCQGLSQPGAALQVLWLGDCDVAHSGCASLASVLLVNRSLREL 372

Query: 449 DLAYNPIGADGAKALSEVLKFHGNI 473
           DL+ N +G +G   L E ++  G +
Sbjct: 373 DLSNNCMGEEGILRLMESVEQPGCV 397



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 182/394 (46%), Gaps = 8/394 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + + L        ++S     +T  G      +L+S   L+
Sbjct: 26  SLTELSLCTNELGDAGVHLVLQGLQSPTCKIRKLSLQNCCLTKTGCGVLPDMLRSMPTLR 85

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L L+ NP+GD G++ LC  L+D    +E+LQ+   +L     +++A  L+     + L 
Sbjct: 86  ELYLNDNPLGDAGLQLLCSGLLDPQCHLEKLQVEYCNLTAASCESLASALRAKRHFKELA 145

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN +  +G   L   L++++  +  L L      +     L   +    SL+EL L  
Sbjct: 146 VSNNELGEAGVRVLCRGLVDSACQLEVLKLENCGLTSASCEDLCGVVASKPSLQELDLGD 205

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD+GI  L   L     ++ VL + +  I+  G   +   ++  +SL  ++L  N +
Sbjct: 206 NKLGDQGIATLCPRLLHPSCQIRVLWLWDCDITTAGCRDLCRVLRAKESLKEMSLAGNAL 265

Query: 400 GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + ++L +    + ++ +   +  +      + +L  N+ +  L L+ N +G  
Sbjct: 266 GDEGARLLCESLLEPACQLQSLWVKSCSFTAASCQHFSSMLTRNTCLVELQLSNNKLGDC 325

Query: 459 GAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G  +  L LG C +  SG   +A +L  N ++  LDL  N + +EG  
Sbjct: 326 GVQQLCQGLSQPGAALQVLWLGDCDVAHSGCASLASVLLVNRSLRELDLSNNCMGEEGIL 385

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDDGAFAI 548
            L +S +    V E L   D+ ++E  D+   A+
Sbjct: 386 RLMESVEQPGCVLEQLVLYDIYWSEEMDNSLRAL 419


>gi|403343192|gb|EJY70919.1| hypothetical protein OXYTRI_08213 [Oxytricha trifallax]
          Length = 902

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 172/364 (47%), Gaps = 42/364 (11%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA------NGITAAGIKA 209
           +F  + +   ++D+S       G   +  SLGYNQ+  +++ ++      N + A G++ 
Sbjct: 319 KFIMKTQTIVALDLSSNEMTASGGQAILNSLGYNQSITDLNISSFEGLNRNTLGAKGVQP 378

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-----------------VDNAGVE--- 249
              VL  N+ L  LN+SGN IG++G+  +CD L                 +   G+E   
Sbjct: 379 LKSVLAYNMFLTMLNISGNFIGNKGLSYICDGLREGQNQTLIKLNLALNDISGDGIEYLY 438

Query: 250 ---------RLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALL 299
                     L LS   L+++G K I +LL K   +L  L L +   +  G TSL + + 
Sbjct: 439 STLGVTKIKELNLSRNPLKNKGIKLIGDLLSKGGLVLENLNLQDTQFNCQGATSLYQGIK 498

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
            N+ ++ L ++ N       N LA  L  N SL +L L    + D G   ++ G+  R  
Sbjct: 499 RNNKLKYLVIDDNNLQGKTLNELAAALWTNASLIKLSLENCQLQDNGCIYVIDGI-ERNS 557

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNC-KSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            +  L++  N+I  +GA  +A+++ +   SL  +N+  N +GD+G  KIA AL++NR IT
Sbjct: 558 FIKELNLKRNNIEYQGASRIAKFLDSAGVSLHHLNISENRLGDKGGTKIAKALQRNRGIT 617

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLK 477
            + +    I  + A  +A+ +  N  IT + L +N       K L+++ K  H NI+  +
Sbjct: 618 KVSMFDTEIRDECAKELAQAMSTNKSITHMSLGWNTF---SPKYLAQINKLSHENISKAR 674

Query: 478 LGWC 481
              C
Sbjct: 675 EVKC 678



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 166/345 (48%), Gaps = 16/345 (4%)

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
           PI    +  + +I   +  + ++ L    L DEGAK  A+ +     +  L+L++N +  
Sbjct: 283 PISAHTIIRIVEI---SPNIAKILLPKNQLGDEGAKIFAKFIMKTQTIVALDLSSNEMTA 339

Query: 289 SGFTSLAEALLENSTIRSLH------LNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           SG  ++  +L  N +I  L+      LN N  GA G   L   L  N  L  L++ GN I
Sbjct: 340 SGGQAILNSLGYNQSITDLNISSFEGLNRNTLGAKGVQPLKSVLAYNMFLTMLNISGNFI 399

Query: 343 GDEGIRALMSGLSSRKGK---LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           G++G+  +  GL  R+G+   L  L++  N IS  G  ++   +   K +  +NL  N +
Sbjct: 400 GNKGLSYICDGL--REGQNQTLIKLNLALNDISGDGIEYLYSTLGVTK-IKELNLSRNPL 456

Query: 400 GDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            ++G + I D L K    +  ++L     + +GA+++ + +K N+ +  L +  N +   
Sbjct: 457 KNKGIKLIGDLLSKGGLVLENLNLQDTQFNCQGATSLYQGIKRNNKLKYLVIDDNNLQGK 516

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
               L+  L  + ++  L L  CQ+  +G  +V D +  N+ I  L+L+ N +  +GA  
Sbjct: 517 TLNELAAALWTNASLIKLSLENCQLQDNGCIYVIDGIERNSFIKELNLKRNNIEYQGASR 576

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           +A+       +L  ++++ N + D G   IA+AL+ N  +   S+
Sbjct: 577 IAKFLDSAGVSLHHLNISENRLGDKGGTKIAKALQRNRGITKVSM 621



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 163/359 (45%), Gaps = 14/359 (3%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE---- 280
           L  N +GDEG K     ++    +  L LSS ++   G +AI   L  N  +  L     
Sbjct: 304 LPKNQLGDEGAKIFAKFIMKTQTIVALDLSSNEMTASGGQAILNSLGYNQSITDLNISSF 363

Query: 281 --LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL-EG-NKSLRELH 336
             LN N +   G   L   L  N  +  L+++GN+ G  G + +  GL EG N++L +L+
Sbjct: 364 EGLNRNTLGAKGVQPLKSVLAYNMFLTMLNISGNFIGNKGLSYICDGLREGQNQTLIKLN 423

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW-INLY 395
           L  N I  +GI  L S L     K+  L++  N +  KG   + + +     +L  +NL 
Sbjct: 424 LALNDISGDGIEYLYSTLGV--TKIKELNLSRNPLKNKGIKLIGDLLSKGGLVLENLNLQ 481

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
                 +GA  +   +K+N  +  + +  NN+  K  + +A  L  N+ +  L L    +
Sbjct: 482 DTQFNCQGATSLYQGIKRNNKLKYLVIDDNNLQGKTLNELAAALWTNASLIKLSLENCQL 541

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN-TISILDLRANGLRDE 514
             +G   + + ++ +  I  L L    I   GA  +A  L     ++  L++  N L D+
Sbjct: 542 QDNGCIYVIDGIERNSFIKELNLKRNNIEYQGASRIAKFLDSAGVSLHHLNISENRLGDK 601

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
           G   +A++ +  N  +T + +   EIRD+ A  +AQA+  N+ +   SL   N F  K+
Sbjct: 602 GGTKIAKALQ-RNRGITKVSMFDTEIRDECAKELAQAMSTNKSITHMSLGW-NTFSPKY 658



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 14/217 (6%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           +G+ S   K      E+I  C    +   LY+  I    A  I   ++ +  I  I L  
Sbjct: 250 MGDQSFRKKAYAVQIEFIDYCTKYCYNRKLYLRPIS---AHTIIRIVEISPNIAKILLPK 306

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ-- 482
           N +  +GA   A+ +     I +LDL+ N + A G +A+   L ++ +I  L +   +  
Sbjct: 307 NQLGDEGAKIFAKFIMKTQTIVALDLSSNEMTASGGQAILNSLGYNQSITDLNISSFEGL 366

Query: 483 ----IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV-VNEALTSIDLAF 537
               +GA G + +  +L YN  +++L++  N + ++G   +    +   N+ L  ++LA 
Sbjct: 367 NRNTLGAKGVQPLKSVLAYNMFLTMLNISGNFIGNKGLSYICDGLREGQNQTLIKLNLAL 426

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           N+I  DG   +   L       +  LNL+ N L   G
Sbjct: 427 NDISGDGIEYLYSTLGV---TKIKELNLSRNPLKNKG 460


>gi|334327424|ref|XP_001377814.2| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Monodelphis domestica]
          Length = 518

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 132/250 (52%), Gaps = 1/250 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S + ++ R  G +G   LA +L  N +  +++ + N +   G  A  G+L+ N  +  L+
Sbjct: 61  SELTLTHRGLGSQGARALASALISNTSILKLNLSDNWLNDDGAVAIAGMLKENCFITDLD 120

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N +G +G K LC  L +NA + +L+LS  DL  + AK IA+ L  N+ + VL+L++N
Sbjct: 121 LSDNKLGAKGAKALCSALKENASIRQLRLSGSDLGPQAAKDIADALLVNTKVEVLDLSHN 180

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           ++D      L  AL EN+ I+ L+L+ N+   +GA    +G+  N  LR L L  N  GD
Sbjct: 181 LLDEEAGEKLGPALAENAGIKELNLSWNHLRGMGAVIFTRGVGANTFLRVLDLSYNGFGD 240

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G  AL   L      L  L+I NN IS  GA   +  ++  ++L  +++  N + +EG 
Sbjct: 241 PGAAALGEALKVNN-VLEELNISNNRISLPGAIRFSSGLRENQTLRILSMGRNPMRNEGC 299

Query: 405 EKIADALKQN 414
             I   ++ N
Sbjct: 300 LCILKVIQLN 309



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 147/311 (47%), Gaps = 41/311 (13%)

Query: 251 LQLSSVDLRDEGAKAIAE-LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           L L+   L  +GA+A+A  L+ N SIL+ L L++N ++  G  ++A  L EN  I  L L
Sbjct: 63  LTLTHRGLGSQGARALASALISNTSILK-LNLSDNWLNDDGAVAIAGMLKENCFITDLDL 121

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N  GA GA AL   L+ N S+R+L L G+ +G +  + +   L     K+ VLD+ +N
Sbjct: 122 SDNKLGAKGAKALCSALKENASIRQLRLSGSDLGPQAAKDIADALLVNT-KVEVLDLSHN 180

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            +                             +E  EK+  AL +N  I  ++L  N++  
Sbjct: 181 LLD----------------------------EEAGEKLGPALAENAGIKELNLSWNHLRG 212

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
            GA    R +  N+ +  LDL+YN  G  GA AL E LK +  +  L +   +I   GA 
Sbjct: 213 MGAVIFTRGVGANTFLRVLDLSYNGFGDPGAAALGEALKVNNVLEELNISNNRISLPGAI 272

Query: 490 FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN-------EALTSIDLAFNEIRD 542
             +  LR N T+ IL +  N +R+EG  C+    KV+        E L   D+  N+  D
Sbjct: 273 RFSSGLRENQTLRILSMGRNPMRNEGCLCI---LKVIQLNPDSGLEVLDFSDIHLNKDFD 329

Query: 543 DGAFAIAQALK 553
           + A ++ +A  
Sbjct: 330 ELACSMQEAFP 340



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 3/190 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L    +G +GA  +A AL  N +I  ++L  N ++  GA AIA +LK+N  IT LDL+
Sbjct: 63  LTLTHRGLGSQGARALASALISNTSILKLNLSDNWLNDDGAVAIAGMLKENCFITDLDLS 122

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +GA GAKAL   LK + +I  L+L    +G   A+ +AD L  N  + +LDL  N L
Sbjct: 123 DNKLGAKGAKALCSALKENASIRQLRLSGSDLGPQAAKDIADALLVNTKVEVLDLSHNLL 182

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            +E  + L  +    N  +  ++L++N +R  GA    + + AN  + V  L+L+ N   
Sbjct: 183 DEEAGEKLGPAL-AENAGIKELNLSWNHLRGMGAVIFTRGVGANTFLRV--LDLSYNGFG 239

Query: 572 KFGQSALTDA 581
             G +AL +A
Sbjct: 240 DPGAAALGEA 249



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 115/230 (50%), Gaps = 2/230 (0%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L    +G +G RAL S L S    L  L++ +N ++  GA  +A  +K    +  ++
Sbjct: 62  ELTLTHRGLGSQGARALASALISNTSILK-LNLSDNWLNDDGAVAIAGMLKENCFITDLD 120

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N +G +GA+ +  ALK+N +I  + L G+++  + A  IA  L  N+ +  LDL++N
Sbjct: 121 LSDNKLGAKGAKALCSALKENASIRQLRLSGSDLGPQAAKDIADALLVNTKVEVLDLSHN 180

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +  +  + L   L  +  I  L L W  +   GA      +  N  + +LDL  NG  D
Sbjct: 181 LLDEEAGEKLGPALAENAGIKELNLSWNHLRGMGAVIFTRGVGANTFLRVLDLSYNGFGD 240

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
            GA  L ++ K VN  L  ++++ N I   GA   +  L+ N+ + + S+
Sbjct: 241 PGAAALGEALK-VNNVLEELNISNNRISLPGAIRFSSGLRENQTLRILSM 289



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 93/193 (48%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           KE    + +D+S    G +G   L  +L  N +  ++  + + +     K     L  N 
Sbjct: 111 KENCFITDLDLSDNKLGAKGAKALCSALKENASIRQLRLSGSDLGPQAAKDIADALLVNT 170

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            ++ L+LS N + +E  + L   L +NAG++ L LS   LR  GA      +  N+ LRV
Sbjct: 171 KVEVLDLSHNLLDEEAGEKLGPALAENAGIKELNLSWNHLRGMGAVIFTRGVGANTFLRV 230

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+ N     G  +L EAL  N+ +  L+++ N     GA   + GL  N++LR L + 
Sbjct: 231 LDLSYNGFGDPGAAALGEALKVNNVLEELNISNNRISLPGAIRFSSGLRENQTLRILSMG 290

Query: 339 GNSIGDEGIRALM 351
            N + +EG   ++
Sbjct: 291 RNPMRNEGCLCIL 303



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 73/168 (43%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL  +  + L    KE  +   + +SG + G +    +A++L  N   E +  + N +  
Sbjct: 125 KLGAKGAKALCSALKENASIRQLRLSGSDLGPQAAKDIADALLVNTKVEVLDLSHNLLDE 184

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
              +     L  N  +K LNLS N +   G       +  N  +  L LS     D GA 
Sbjct: 185 EAGEKLGPALAENAGIKELNLSWNHLRGMGAVIFTRGVGANTFLRVLDLSYNGFGDPGAA 244

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           A+ E LK N++L  L ++NN I   G    +  L EN T+R L +  N
Sbjct: 245 ALGEALKVNNVLEELNISNNRISLPGAIRFSSGLRENQTLRILSMGRN 292



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 5/152 (3%)

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           + L L +  +G+ GA+AL+  L  + +I  L L    +   GA  +A ML+ N  I+ LD
Sbjct: 61  SELTLTHRGLGSQGARALASALISNTSILKLNLSDNWLNDDGAVAIAGMLKENCFITDLD 120

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           L  N L  +GAK L  + K  N ++  + L+ +++    A  IA AL  N  V V  L+L
Sbjct: 121 LSDNKLGAKGAKALCSALK-ENASIRQLRLSGSDLGPQAAKDIADALLVNTKVEV--LDL 177

Query: 566 ANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
           ++N L +     L  A  L      KE+N+ +
Sbjct: 178 SHNLLDEEAGEKLGPA--LAENAGIKELNLSW 207


>gi|363737252|ref|XP_422803.3| PREDICTED: leucine-rich repeat-containing protein 34 [Gallus
           gallus]
          Length = 418

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 33/313 (10%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DE  + +A +L+    +  L+L  N++   G   +A  L ENST+R L+L  N  G  GA
Sbjct: 63  DEDVQVLASVLRTAVFVTGLDLRYNILTDVGVRHVATFLQENSTLRYLNLMFNDIGTSGA 122

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             +A  L  N++L  L + GN IG++G     S L      L  LD+G+           
Sbjct: 123 ELIANALHSNETLLHLRMTGNKIGNKGGMYFASMLQV-NCTLEKLDLGD----------- 170

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA---IA 436
                 C           D+G +    IA  L QN+ +  I+L    ++S+       IA
Sbjct: 171 ------C-----------DLGTQCLIAIASVLTQNKAVKAINLNRPLLYSQEEETTVHIA 213

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            +LK+NS +  L L  + I + G K L E L  + ++  L L   +I     +F+ ++L+
Sbjct: 214 LMLKNNSSLVELHLCKHEIRSLGVKRLCEALYENCSLRYLDLSCNKITRDDVKFLGELLK 273

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            N T+ ILDL +N + D+GA  L+++  + N  L ++ +  N IR  G  A++Q++K N 
Sbjct: 274 QNQTLEILDLNSNRIEDDGAIYLSEALALYNRTLKALSVVSNNIRGKGLVALSQSMKINM 333

Query: 557 DVAVTSLNLANNF 569
           +++   +   NNF
Sbjct: 334 ELSYIYI-WGNNF 345



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 167/382 (43%), Gaps = 48/382 (12%)

Query: 188 YNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK---TLNLSGN-------PIGDEGVKC 237
           Y QT + +S   N   A  ++  D     NI      TL ++GN        + DE V+ 
Sbjct: 11  YLQTCQNLSQPENHFVARVLQEADE--SDNIRQAKGITLKIAGNNRLVPVQRVTDEDVQV 68

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           L  +L     V  L L    L D G + +A  L+ NS LR L L  N I  SG   +A A
Sbjct: 69  LASVLRTAVFVTGLDLRYNILTDVGVRHVATFLQENSTLRYLNLMFNDIGTSGAELIANA 128

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           L  N T+  L + GN  G  G    A  L+ N +L +L L    +G + + A+ S L+  
Sbjct: 129 LHSNETLLHLRMTGNKIGNKGGMYFASMLQVNCTLEKLDLGDCDLGTQCLIAIASVLTQN 188

Query: 358 KGKLAVLDIGNN-----SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
           K   AV  I  N     S   +   H+A  +KN  SL+ ++L  ++I   G +++ +AL 
Sbjct: 189 K---AVKAINLNRPLLYSQEEETTVHIALMLKNNSSLVELHLCKHEIRSLGVKRLCEALY 245

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           +N ++  +DL  N I       +  +LK N  +  LDL  N I  DGA  LSE L     
Sbjct: 246 ENCSLRYLDLSCNKITRDDVKFLGELLKQNQTLEILDLNSNRIEDDGAIYLSEALAL--- 302

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
                                   YN T+  L + +N +R +G   L+QS K +N  L+ 
Sbjct: 303 ------------------------YNRTLKALSVVSNNIRGKGLVALSQSMK-INMELSY 337

Query: 533 IDLAFNEIRDDGAFAIAQALKA 554
           I +  N   +  + A ++ ++A
Sbjct: 338 IYIWGNNFDEAVSTAFSELIQA 359



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 160/356 (44%), Gaps = 17/356 (4%)

Query: 125 AEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAE 184
           A+G+   +     L+     ++  E  Q L    +     + +D+      D G+  +A 
Sbjct: 42  AKGITLKIAGNNRLVP--VQRVTDEDVQVLASVLRTAVFVTGLDLRYNILTDVGVRHVAT 99

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
            L  N T   ++   N I  +G +     L SN  L  L ++GN IG++G      +L  
Sbjct: 100 FLQENSTLRYLNLMFNDIGTSGAELIANALHSNETLLHLRMTGNKIGNKGGMYFASMLQV 159

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI---DYSGFTSLAEALLEN 301
           N  +E+L L   DL  +   AIA +L  N  ++ + LN  ++   +      +A  L  N
Sbjct: 160 NCTLEKLDLGDCDLGTQCLIAIASVLTQNKAVKAINLNRPLLYSQEEETTVHIALMLKNN 219

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S++  LHL  +   +LG   L + L  N SLR L L  N I  + ++  +  L  +   L
Sbjct: 220 SSLVELHLCKHEIRSLGVKRLCEALYENCSLRYLDLSCNKITRDDVK-FLGELLKQNQTL 278

Query: 362 AVLDIGNNSISAKGAFHVAE----YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
            +LD+ +N I   GA +++E    Y +  K+L  ++   N+I  +G   ++ ++K N  +
Sbjct: 279 EILDLNSNRIEDDGAIYLSEALALYNRTLKALSVVS---NNIRGKGLVALSQSMKINMEL 335

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV---LKFH 470
           + I + GNN     ++A + +++   +  +      P   DG   L+E+   LK H
Sbjct: 336 SYIYIWGNNFDEAVSTAFSELIQAGRLKPNCT-DVEPYEVDGHVHLAELSHGLKKH 390


>gi|301757851|ref|XP_002914759.1| PREDICTED: uncharacterized protein C14orf166B-like [Ailuropoda
           melanoleuca]
          Length = 493

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 151/297 (50%), Gaps = 9/297 (3%)

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            L N     ++LN +  G  G  A+A  L  N S+  L L  N + +EG+ +L+  L   
Sbjct: 106 FLRNMEESYVNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNCLMEEGLLSLVEMLQEN 165

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRT 416
              L  ++I +N +  KGA  ++E+++   S LW + L  N+  DE AE +  AL  N  
Sbjct: 166 Y-YLQEMNISDNDLGLKGARIISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALSTNYQ 224

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I T+DL  N    KG   + ++L  N  + SLDL++N     GA AL   L+ +  +  L
Sbjct: 225 IKTLDLSHNQFSDKGGEHVGQMLALNIGLQSLDLSWNHFYIRGAVALCNGLRANMTLQKL 284

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L     G  GA  + ++LR NN++  LD+ +N + ++G   +++  + VNE+L  + L 
Sbjct: 285 DLSMNGFGNEGATALGEVLRLNNSLVYLDVSSNNINNDGVSKISKGLE-VNESLKVLKLF 343

Query: 537 FNEIRDDGAFAIAQALKAN-----EDVAVTSLNLANNFLTKF-GQSALTDAKDLVYE 587
            N +  DGA  +  ++K N     E++ ++++ ++  FL    G  A+    D++Y+
Sbjct: 344 LNPMNMDGAVLLILSIKRNPKSKMEEIDISNVLVSEQFLKILDGVCAIHPQLDVMYK 400



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 130/275 (47%), Gaps = 28/275 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN ++ TL L+ N + +EG+  L ++L +N  +
Sbjct: 109 NMEESYVNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNCLMEEGLLSLVEMLQENYYL 168

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + + +S  DL  +GA+ I+E L+ N+                           S++ +L 
Sbjct: 169 QEMNISDNDLGLKGARIISEFLQRNT---------------------------SSLWNLQ 201

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+GN      A  L + L  N  ++ L L  N   D+G   +   L+   G L  LD+  
Sbjct: 202 LSGNNFRDESAELLCQALSTNYQIKTLDLSHNQFSDKGGEHVGQMLALNIG-LQSLDLSW 260

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N    +GA  +   ++   +L  ++L MN  G+EGA  + + L+ N ++  +D+  NNI+
Sbjct: 261 NHFYIRGAVALCNGLRANMTLQKLDLSMNGFGNEGATALGEVLRLNNSLVYLDVSSNNIN 320

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           + G S I++ L+ N  +  L L  NP+  DGA  L
Sbjct: 321 NDGVSKISKGLEVNESLKVLKLFLNPMNMDGAVLL 355



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 131/251 (52%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N +   +  A N +   G+ +   +LQ N  L+ +N
Sbjct: 113 SYVNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNCLMEEGLLSLVEMLQENYYLQEMN 172

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G +G + + + L  N + +  LQLS  + RDE A+ + + L  N  ++ L+L++
Sbjct: 173 ISDNDLGLKGARIISEFLQRNTSSLWNLQLSGNNFRDESAELLCQALSTNYQIKTLDLSH 232

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   + + L  N  ++SL L+ N+    GA AL  GL  N +L++L L  N  G
Sbjct: 233 NQFSDKGGEHVGQMLALNIGLQSLDLSWNHFYIRGAVALCNGLRANMTLQKLDLSMNGFG 292

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+ +N+I+  G   +++ ++  +SL  + L++N +  +G
Sbjct: 293 NEGATALGEVL-RLNNSLVYLDVSSNNINNDGVSKISKGLEVNESLKVLKLFLNPMNMDG 351

Query: 404 AEKIADALKQN 414
           A  +  ++K+N
Sbjct: 352 AVLLILSIKRN 362



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 14/230 (6%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++ +SG NF DE    L ++L  N   + +  + N  +  G +    +L  NI L++L+L
Sbjct: 199 NLQLSGNNFRDESAELLCQALSTNYQIKTLDLSHNQFSDKGGEHVGQMLALNIGLQSLDL 258

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S N     G   LC+ L  N  +++L LS     +EGA A+ E+L+ N+ L  L++++N 
Sbjct: 259 SWNHFYIRGAVALCNGLRANMTLQKLDLSMNGFGNEGATALGEVLRLNNSLVYLDVSSNN 318

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK--SLRELHLHGNSIG 343
           I+  G + +++ L  N +++ L L  N     GA  L   ++ N    + E+ +  N + 
Sbjct: 319 INNDGVSKISKGLEVNESLKVLKLFLNPMNMDGAVLLILSIKRNPKSKMEEIDI-SNVLV 377

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            E    ++ G+ +   +L V+       S K A            LLW+N
Sbjct: 378 SEQFLKILDGVCAIHPQLDVMYKSVQGFSEKKAL-----------LLWVN 416



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 1/150 (0%)

Query: 142 FTGKLFR-ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN 200
            +G  FR ES + L +         ++D+S   F D+G   + + L  N   + +  + N
Sbjct: 202 LSGNNFRDESAELLCQALSTNYQIKTLDLSHNQFSDKGGEHVGQMLALNIGLQSLDLSWN 261

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
                G  A    L++N+ L+ L+LS N  G+EG   L ++L  N  +  L +SS ++ +
Sbjct: 262 HFYIRGAVALCNGLRANMTLQKLDLSMNGFGNEGATALGEVLRLNNSLVYLDVSSNNINN 321

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           +G   I++ L+ N  L+VL+L  N ++  G
Sbjct: 322 DGVSKISKGLEVNESLKVLKLFLNPMNMDG 351


>gi|196007250|ref|XP_002113491.1| hypothetical protein TRIADDRAFT_57724 [Trichoplax adhaerens]
 gi|190583895|gb|EDV23965.1| hypothetical protein TRIADDRAFT_57724 [Trichoplax adhaerens]
          Length = 403

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 154/294 (52%), Gaps = 7/294 (2%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           + D+    +C  +  N  V  L L+  ++ DEGAK I +LL+N+  LR+L L+   I  +
Sbjct: 79  LDDDDANMICRTMKVNFHVATLNLAYNNISDEGAKCIGKLLENHP-LRLLNLSYCDIGPA 137

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   +A+ +    T+  L L+GN   + G  A+A  L+ N S++EL+L    +  E + A
Sbjct: 138 GGEYIAKGIQMTETLTVLDLSGNKLKSKGVLAIAGALQVNLSVKELYLANTDMKTECVVA 197

Query: 350 LMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           + + L  +   + +L+I      S   +   H+A  +K   SL  ++L  +DI D GAE+
Sbjct: 198 IATVLR-QNNIVQILNIDRPLLFSQQEETTVHIANMLKVNSSLRKLHLSKHDIRDFGAER 256

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           + +AL  N  +  +DL  N I   GA  I+++L  N+ +  L+L +N I +DGA  LS V
Sbjct: 257 LVEALIYNTALEELDLSCNRITRDGAGHISKLLLQNTPLKHLNLDFNRIESDGAIHLSRV 316

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
           L F+ ++ +L +    I  SG   +AD L  N T+  L +  N L  E + C+A
Sbjct: 317 LSFNTHLQSLHIASNCISGSGLCAIADSLSKNQTLMGLYVWGNNL--ENSACVA 368



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 147/306 (48%), Gaps = 6/306 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           ++++++  N  DEG   + + L  N     ++ +   I  AG +     +Q    L  L+
Sbjct: 98  ATLNLAYNNISDEGAKCIGKLLE-NHPLRLLNLSYCDIGPAGGEYIAKGIQMTETLTVLD 156

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LSGN +  +GV  +   L  N  V+ L L++ D++ E   AIA +L+ N+I+++L ++  
Sbjct: 157 LSGNKLKSKGVLAIAGALQVNLSVKELYLANTDMKTECVVAIATVLRQNNIVQILNIDRP 216

Query: 285 MI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++          +A  L  NS++R LHL+ +     GA  L + L  N +L EL L  N 
Sbjct: 217 LLFSQQEETTVHIANMLKVNSSLRKLHLSKHDIRDFGAERLVEALIYNTALEELDLSCNR 276

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I  +G    +S L  +   L  L++  N I + GA H++  +     L  +++  N I  
Sbjct: 277 ITRDG-AGHISKLLLQNTPLKHLNLDFNRIESDGAIHLSRVLSFNTHLQSLHIASNCISG 335

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA-YNPIGADGA 460
            G   IAD+L +N+T+  + + GNN+ +    A   +++D+      +     P   DG 
Sbjct: 336 SGLCAIADSLSKNQTLMGLYVWGNNLENSACVAFQELMEDDPPRLKEEFTDVKPYVVDGI 395

Query: 461 KALSEV 466
             L+E+
Sbjct: 396 VYLAEL 401



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 107/198 (54%), Gaps = 5/198 (2%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           +A L++  N+IS +GA  + + ++N   L  +NL   DIG  G E IA  ++   T+T +
Sbjct: 97  VATLNLAYNNISDEGAKCIGKLLEN-HPLRLLNLSYCDIGPAGGEYIAKGIQMTETLTVL 155

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           DL GN + SKG  AIA  L+ N  +  L LA   +  +   A++ VL+ +  +  L +  
Sbjct: 156 DLSGNKLKSKGVLAIAGALQVNLSVKELYLANTDMKTECVVAIATVLRQNNIVQILNIDR 215

Query: 481 CQIGASGAE---FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
             + +   E    +A+ML+ N+++  L L  + +RD GA+ L ++  + N AL  +DL+ 
Sbjct: 216 PLLFSQQEETTVHIANMLKVNSSLRKLHLSKHDIRDFGAERLVEAL-IYNTALEELDLSC 274

Query: 538 NEIRDDGAFAIAQALKAN 555
           N I  DGA  I++ L  N
Sbjct: 275 NRITRDGAGHISKLLLQN 292



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 32/136 (23%)

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A+ I R +K N  + +L+LAYN I  +GAK + ++L+ H  +  L L +C IG +G E++
Sbjct: 84  ANMICRTMKVNFHVATLNLAYNNISDEGAKCIGKLLENHP-LRLLNLSYCDIGPAGGEYI 142

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
           A  ++                             + E LT +DL+ N+++  G  AIA A
Sbjct: 143 AKGIQ-----------------------------MTETLTVLDLSGNKLKSKGVLAIAGA 173

Query: 552 LKANEDVAVTSLNLAN 567
           L+ N  ++V  L LAN
Sbjct: 174 LQVN--LSVKELYLAN 187



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 4/163 (2%)

Query: 146 LFRESKQTLNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           LF + ++T    A  L+  SS+    +S  +  D G   L E+L YN   EE+  + N I
Sbjct: 218 LFSQQEETTVHIANMLKVNSSLRKLHLSKHDIRDFGAERLVEALIYNTALEELDLSCNRI 277

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
           T  G      +L  N  LK LNL  N I  +G   L  +L  N  ++ L ++S  +   G
Sbjct: 278 TRDGAGHISKLLLQNTPLKHLNLDFNRIESDGAIHLSRVLSFNTHLQSLHIASNCISGSG 337

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             AIA+ L  N  L  L +  N ++ S   +  E L+E+   R
Sbjct: 338 LCAIADSLSKNQTLMGLYVWGNNLENSACVAFQE-LMEDDPPR 379


>gi|320165895|gb|EFW42794.1| interleukin-1 receptor-associated kinase 4 [Capsaspora owczarzaki
           ATCC 30864]
          Length = 669

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 102/168 (60%), Gaps = 3/168 (1%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +KN    L+  L  N IGDE A+ IA+ALK N T+T + LGGN I   GA AIA  LK N
Sbjct: 12  VKNASGTLY--LSRNRIGDEEAKAIAEALKVNTTLTHLFLGGNQIGDAGARAIAEALKVN 69

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +T L L+ N IG  GA+A++EVLK +  +  L L   QIG  GA  +A+ L+ N T++
Sbjct: 70  KTVTLLSLSENQIGDVGAQAIAEVLKVNTMLKDLNLNKNQIGDVGAHAIAEALKVNKTLT 129

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
            LDL  N + D GA+  AQ+ K VN+ L +++L+ N + + G  A+ Q
Sbjct: 130 YLDLHQNLIGDAGARANAQALK-VNKTLKTLNLSQNFLTNTGINALKQ 176



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/160 (43%), Positives = 96/160 (60%), Gaps = 3/160 (1%)

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           T+ L  N I  + A AIA  LK N+ +T L L  N IG  GA+A++E LK +  +  L L
Sbjct: 18  TLYLSRNRIGDEEAKAIAEALKVNTTLTHLFLGGNQIGDAGARAIAEALKVNKTVTLLSL 77

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
              QIG  GA+ +A++L+ N  +  L+L  N + D GA  +A++ KV N+ LT +DL  N
Sbjct: 78  SENQIGDVGAQAIAEVLKVNTMLKDLNLNKNQIGDVGAHAIAEALKV-NKTLTYLDLHQN 136

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
            I D GA A AQALK N+   + +LNL+ NFLT  G +AL
Sbjct: 137 LIGDAGARANAQALKVNK--TLKTLNLSQNFLTNTGINAL 174



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 4/172 (2%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            L +  N I  + A  +AE +K   +L  + L  N IGD GA  IA+ALK N+T+T + L
Sbjct: 18  TLYLSRNRIGDEEAKAIAEALKVNTTLTHLFLGGNQIGDAGARAIAEALKVNKTVTLLSL 77

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I   GA AIA VLK N+++  L+L  N IG  GA A++E LK +  +  L L    
Sbjct: 78  SENQIGDVGAQAIAEVLKVNTMLKDLNLNKNQIGDVGAHAIAEALKVNKTLTYLDLHQNL 137

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
           IG +GA   A  L+ N T+  L+L  N L + G   L Q    ++ A+  +D
Sbjct: 138 IGDAGARANAQALKVNKTLKTLNLSQNFLTNTGINALKQ----IDNAICKLD 185



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 86/154 (55%), Gaps = 1/154 (0%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL LS N IGDE  K + + L  N  +  L L    + D GA+AIAE LK N  + +L L
Sbjct: 18  TLYLSRNRIGDEEAKAIAEALKVNTTLTHLFLGGNQIGDAGARAIAEALKVNKTVTLLSL 77

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N I   G  ++AE L  N+ ++ L+LN N  G +GA+A+A+ L+ NK+L  L LH N 
Sbjct: 78  SENQIGDVGAQAIAEVLKVNTMLKDLNLNKNQIGDVGAHAIAEALKVNKTLTYLDLHQNL 137

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           IGD G RA    L   K  L  L++  N ++  G
Sbjct: 138 IGDAGARANAQALKVNK-TLKTLNLSQNFLTNTG 170



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 82/143 (57%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           KA    L+ N  L  L L GN IGD G + + + L  N  V  L LS   + D GA+AIA
Sbjct: 32  KAIAEALKVNTTLTHLFLGGNQIGDAGARAIAEALKVNKTVTLLSLSENQIGDVGAQAIA 91

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E+LK N++L+ L LN N I   G  ++AEAL  N T+  L L+ N  G  GA A A+ L+
Sbjct: 92  EVLKVNTMLKDLNLNKNQIGDVGAHAIAEALKVNKTLTYLDLHQNLIGDAGARANAQALK 151

Query: 328 GNKSLRELHLHGNSIGDEGIRAL 350
            NK+L+ L+L  N + + GI AL
Sbjct: 152 VNKTLKTLNLSQNFLTNTGINAL 174



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 85/156 (54%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GDE    +AE+L  N T   +    N I  AG +A    L+ N  +  L+LS N
Sbjct: 21  LSRNRIGDEEAKAIAEALKVNTTLTHLFLGGNQIGDAGARAIAEALKVNKTVTLLSLSEN 80

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + ++L  N  ++ L L+   + D GA AIAE LK N  L  L+L+ N+I  
Sbjct: 81  QIGDVGAQAIAEVLKVNTMLKDLNLNKNQIGDVGAHAIAEALKVNKTLTYLDLHQNLIGD 140

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           +G  + A+AL  N T+++L+L+ N+    G NAL +
Sbjct: 141 AGARANAQALKVNKTLKTLNLSQNFLTNTGINALKQ 176



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 2/143 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G   GD G   +AE+L  N+T   +S + N I   G +A   VL+ N  LK LNL+ N
Sbjct: 49  LGGNQIGDAGARAIAEALKVNKTVTLLSLSENQIGDVGAQAIAEVLKVNTMLKDLNLNKN 108

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G   + + L  N  +  L L    + D GA+A A+ LK N  L+ L L+ N +  
Sbjct: 109 QIGDVGAHAIAEALKVNKTLTYLDLHQNLIGDAGARANAQALKVNKTLKTLNLSQNFLTN 168

Query: 289 SGFTSLAEALLENSTIRSLHLNG 311
           +G  +L +  ++N+  +  H +G
Sbjct: 169 TGINALKQ--IDNAICKLDHSSG 189



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 3/118 (2%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K       ++++    GD G   +AE+L  N+T   +    N I  AG +A  
Sbjct: 88  QAIAEVLKVNTMLKDLNLNKNQIGDVGAHAIAEALKVNKTLTYLDLHQNLIGDAGARANA 147

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
             L+ N  LKTLNLS N + + G+  L  I  DNA + +L  SS  L  + A + AEL
Sbjct: 148 QALKVNKTLKTLNLSQNFLTNTGINALKQI--DNA-ICKLDHSSGRLDHQRAPSPAEL 202



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 3/82 (3%)

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           N    L L  N + DE AK +A++ KV N  LT + L  N+I D GA AIA+ALK N+  
Sbjct: 14  NASGTLYLSRNRIGDEEAKAIAEALKV-NTTLTHLFLGGNQIGDAGARAIAEALKVNK-- 70

Query: 559 AVTSLNLANNFLTKFGQSALTD 580
            VT L+L+ N +   G  A+ +
Sbjct: 71  TVTLLSLSENQIGDVGAQAIAE 92


>gi|410974869|ref|XP_003993862.1| PREDICTED: ribonuclease inhibitor [Felis catus]
          Length = 456

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 158/321 (49%), Gaps = 4/321 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAF 210
           + L +  + L     + +S    GD GL  L + L   Q   E++      +TAA  +  
Sbjct: 98  EVLPDALRSLPTLRELQLSDNPLGDAGLQLLCKGLLDPQCHLEKLQLEYCNLTAASCEPL 157

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAEL 269
             VL++   +K L +S N IG+ GV+ LC  LVD+A  +E L+L +  L     K +  +
Sbjct: 158 AAVLRAWRHVKELVVSNNDIGEAGVQALCRGLVDSACQLETLKLENCGLTPASCKDLCGV 217

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEG 328
           + + + L+ L+L +N +   G  +L  ALL  S+ +R L L        G   L + L  
Sbjct: 218 VASKASLQELDLGDNKLGDQGIATLCPALLHPSSRLRVLWLWDCDITTTGCRDLCQVLRA 277

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            +SL+EL L GN++GDEG R L   L     +L  L + +  ++A    HV+  + + K 
Sbjct: 278 KESLKELSLAGNALGDEGARLLCESLLEPGCQLQSLWVKSCGLTAVCCPHVSAMLTHNKH 337

Query: 389 LLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           L+ + +  N +GD G +++   L Q +  +  + LG  ++ + G +++A +L  N  +  
Sbjct: 338 LVELQMSDNKLGDSGVQELCQGLSQPSAMLRVLWLGDCDVANGGCNSLASLLVVNRSLRE 397

Query: 448 LDLAYNPIGADGAKALSEVLK 468
           LDL+ N +   G   L E L+
Sbjct: 398 LDLSNNCMDDRGILQLMESLE 418



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 193/441 (43%), Gaps = 40/441 (9%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDIL 242
           E L   Q  + V     G+T    K     LQ+N +L  L+L  N + D GV+  L  + 
Sbjct: 17  ELLPLIQQYQVVRLDDCGLTEVRCKDICSALQANPSLTELSLCTNELHDAGVRLVLQGLQ 76

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-N 301
             +  +++L L +  L + G + + + L++   LR L+L++N +  +G   L + LL+  
Sbjct: 77  SPSCRIQKLSLRNCCLTNTGCEVLPDALRSLPTLRELQLSDNPLGDAGLQLLCKGLLDPQ 136

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +  L L      A     LA  L   + ++EL +  N IG+ G++AL  GL     +L
Sbjct: 137 CHLEKLQLEYCNLTAASCEPLAAVLRAWRHVKELVVSNNDIGEAGVQALCRGLVDSACQL 196

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTI 420
             L + N  ++      +   + +  SL  ++L  N +GD+G   +  AL    + +  +
Sbjct: 197 ETLKLENCGLTPASCKDLCGVVASKASLQELDLGDNKLGDQGIATLCPALLHPSSRLRVL 256

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLG 479
            L   +I + G   + +VL+    +  L LA N +G +GA+ L E L   G  + +L + 
Sbjct: 257 WLWDCDITTTGCRDLCQVLRAKESLKELSLAGNALGDEGARLLCESLLEPGCQLQSLWVK 316

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ------------------ 521
            C + A     V+ ML +N  +  L +  N L D G + L Q                  
Sbjct: 317 SCGLTAVCCPHVSAMLTHNKHLVELQMSDNKLGDSGVQELCQGLSQPSAMLRVLWLGDCD 376

Query: 522 ----------SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
                     S  VVN +L  +DL+ N + D G   + ++L+   D A+  L L + + T
Sbjct: 377 VANGGCNSLASLLVVNRSLRELDLSNNCMDDRGILQLMESLE-RPDCALEQLVLYDIYWT 435

Query: 572 KFGQSALTDAKDLVYEMSEKE 592
           +         +DL+  + E++
Sbjct: 436 Q-------QTEDLLQALGERK 449



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 181/389 (46%), Gaps = 8/389 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +      D G+  + + L       +++S     +T  G +     L+S   L+
Sbjct: 52  SLTELSLCTNELHDAGVRLVLQGLQSPSCRIQKLSLRNCCLTNTGCEVLPDALRSLPTLR 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L LS NP+GD G++ LC  L+D    +E+LQL   +L     + +A +L+    ++ L 
Sbjct: 112 ELQLSDNPLGDAGLQLLCKGLLDPQCHLEKLQLEYCNLTAASCEPLAAVLRAWRHVKELV 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I  +G  +L   L++++  + +L L            L   +    SL+EL L  
Sbjct: 172 VSNNDIGEAGVQALCRGLVDSACQLETLKLENCGLTPASCKDLCGVVASKASLQELDLGD 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD+GI  L   L     +L VL + +  I+  G   + + ++  +SL  ++L  N +
Sbjct: 232 NKLGDQGIATLCPALLHPSSRLRVLWLWDCDITTTGCRDLCQVLRAKESLKELSLAGNAL 291

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + ++ L+    + ++ +    + +     ++ +L  N  +  L ++ N +G  
Sbjct: 292 GDEGARLLCESLLEPGCQLQSLWVKSCGLTAVCCPHVSAMLTHNKHLVELQMSDNKLGDS 351

Query: 459 GAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L +    +  L LG C +   G   +A +L  N ++  LDL  N + D G  
Sbjct: 352 GVQELCQGLSQPSAMLRVLWLGDCDVANGGCNSLASLLVVNRSLRELDLSNNCMDDRGIL 411

Query: 518 CLAQSFKVVNEALTSI---DLAFNEIRDD 543
            L +S +  + AL  +   D+ + +  +D
Sbjct: 412 QLMESLERPDCALEQLVLYDIYWTQQTED 440



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 6/263 (2%)

Query: 157 FAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDG 212
            A  LRA+  V    +S  + G+ G+  L   L  +    E +     G+T A  K   G
Sbjct: 157 LAAVLRAWRHVKELVVSNNDIGEAGVQALCRGLVDSACQLETLKLENCGLTPASCKDLCG 216

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELLK 271
           V+ S  +L+ L+L  N +GD+G+  LC  L+  +   R L L   D+   G + + ++L+
Sbjct: 217 VVASKASLQELDLGDNKLGDQGIATLCPALLHPSSRLRVLWLWDCDITTTGCRDLCQVLR 276

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNK 330
               L+ L L  N +   G   L E+LLE    ++SL +      A+    ++  L  NK
Sbjct: 277 AKESLKELSLAGNALGDEGARLLCESLLEPGCQLQSLWVKSCGLTAVCCPHVSAMLTHNK 336

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L EL +  N +GD G++ L  GLS     L VL +G+  ++  G   +A  +   +SL 
Sbjct: 337 HLVELQMSDNKLGDSGVQELCQGLSQPSAMLRVLWLGDCDVANGGCNSLASLLVVNRSLR 396

Query: 391 WINLYMNDIGDEGAEKIADALKQ 413
            ++L  N + D G  ++ ++L++
Sbjct: 397 ELDLSNNCMDDRGILQLMESLER 419


>gi|395827857|ref|XP_003787109.1| PREDICTED: uncharacterized protein C14orf166B homolog [Otolemur
           garnettii]
          Length = 541

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 131/245 (53%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G +G K +   LV N  + +L++   D+ DEG  ++ ++L+ N  L
Sbjct: 88  NMEEPHMNLNHHGLGPKGTKAIAIALVSNTAITKLEVEDNDITDEGLLSLVQMLQENYYL 147

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   ++E L  + S+I +L L+GN      A  L + L  N  +R+L
Sbjct: 148 QEMNISNNSLGLEGARIISEFLQRDASSIWNLELSGNNLKEESAELLCQALSTNYRIRKL 207

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L  N   D G   L   L+   G L  LD+  N    +GA  +   ++   +L  ++L+
Sbjct: 208 NLSHNQFSDLGGEHLGQMLAINVG-LTSLDLSWNQFHIRGAMALCNGLRANLTLKKLDLF 266

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+EGA  + D L+ N ++  +D+G N+I + GAS I+R L+ N  +  L L  NPI
Sbjct: 267 MNGFGNEGALALGDVLRLNSSLVYLDVGSNSIGNDGASKISRGLEANETLKVLKLFLNPI 326

Query: 456 GADGA 460
             DGA
Sbjct: 327 SMDGA 331



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 148/289 (51%), Gaps = 11/289 (3%)

Query: 308 HLNGNYGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           H+N N+ G    G  A+A  L  N ++ +L +  N I DEG+ +L+  L      L  ++
Sbjct: 93  HMNLNHHGLGPKGTKAIAIALVSNTAITKLEVEDNDITDEGLLSLVQMLQENY-YLQEMN 151

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           I NNS+  +GA  ++E+++   S +W + L  N++ +E AE +  AL  N  I  ++L  
Sbjct: 152 ISNNSLGLEGARIISEFLQRDASSIWNLELSGNNLKEESAELLCQALSTNYRIRKLNLSH 211

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N     G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L     G
Sbjct: 212 NQFSDLGGEHLGQMLAINVGLTSLDLSWNQFHIRGAMALCNGLRANLTLKKLDLFMNGFG 271

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
             GA  + D+LR N+++  LD+ +N + ++GA  +++  +  NE L  + L  N I  DG
Sbjct: 272 NEGALALGDVLRLNSSLVYLDVGSNSIGNDGASKISRGLEA-NETLKVLKLFLNPISMDG 330

Query: 545 AFAIAQALKANEDVAVTSLNLANNFLTKF------GQSALTDAKDLVYE 587
           A  +  ++K N    +  L+++N  +T+       G  AL    D+VY+
Sbjct: 331 ALLLILSIKRNPKSRMEELDISNVLVTEQFVKTLDGVYALHPQLDVVYK 379



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 122/246 (49%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + LN++ +   G  ++A AL+ N+ I  L +  N     G  +L + L+ N  L+E+++ 
Sbjct: 94  MNLNHHGLGPKGTKAIAIALVSNTAITKLEVEDNDITDEGLLSLVQMLQENYYLQEMNIS 153

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            NS+G EG R +   L      +  L++  N++  + A  + + +     +  +NL  N 
Sbjct: 154 NNSLGLEGARIISEFLQRDASSIWNLELSGNNLKEESAELLCQALSTNYRIRKLNLSHNQ 213

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
             D G E +   L  N  +T++DL  N  H +GA A+   L+ N  +  LDL  N  G +
Sbjct: 214 FSDLGGEHLGQMLAINVGLTSLDLSWNQFHIRGAMALCNGLRANLTLKKLDLFMNGFGNE 273

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA AL +VL+ + ++  L +G   IG  GA  ++  L  N T+ +L L  N +  +GA  
Sbjct: 274 GALALGDVLRLNSSLVYLDVGSNSIGNDGASKISRGLEANETLKVLKLFLNPISMDGALL 333

Query: 519 LAQSFK 524
           L  S K
Sbjct: 334 LILSIK 339



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 129/249 (51%), Gaps = 2/249 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++++    G +G   +A +L  N    ++    N IT  G+ +   +LQ N  L+ +N+S
Sbjct: 94  MNLNHHGLGPKGTKAIAIALVSNTAITKLEVEDNDITDEGLLSLVQMLQENYYLQEMNIS 153

Query: 227 GNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N +G EG + + + L  D + +  L+LS  +L++E A+ + + L  N  +R L L++N 
Sbjct: 154 NNSLGLEGARIISEFLQRDASSIWNLELSGNNLKEESAELLCQALSTNYRIRKLNLSHNQ 213

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G   L + L  N  + SL L+ N     GA AL  GL  N +L++L L  N  G+E
Sbjct: 214 FSDLGGEHLGQMLAINVGLTSLDLSWNQFHIRGAMALCNGLRANLTLKKLDLFMNGFGNE 273

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL   L      L  LD+G+NSI   GA  ++  ++  ++L  + L++N I  +GA 
Sbjct: 274 GALALGDVL-RLNSSLVYLDVGSNSIGNDGASKISRGLEANETLKVLKLFLNPISMDGAL 332

Query: 406 KIADALKQN 414
            +  ++K+N
Sbjct: 333 LLILSIKRN 341



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 109/228 (47%), Gaps = 3/228 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LK 221
           A + +++   +  DEGL  L + L  N   +E++ + N +   G +     LQ + + + 
Sbjct: 118 AITKLEVEDNDITDEGLLSLVQMLQENYYLQEMNISNNSLGLEGARIISEFLQRDASSIW 177

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L LSGN + +E  + LC  L  N  + +L LS     D G + + ++L  N  L  L+L
Sbjct: 178 NLELSGNNLKEESAELLCQALSTNYRIRKLNLSHNQFSDLGGEHLGQMLAINVGLTSLDL 237

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N     G  +L   L  N T++ L L  N  G  GA AL   L  N SL  L +  NS
Sbjct: 238 SWNQFHIRGAMALCNGLRANLTLKKLDLFMNGFGNEGALALGDVLRLNSSLVYLDVGSNS 297

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKS 388
           IG++G   +  GL + +  L VL +  N IS  GA  +   IK N KS
Sbjct: 298 IGNDGASKISRGLEANE-TLKVLKLFLNPISMDGALLLILSIKRNPKS 344



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 30/222 (13%)

Query: 149 ESKQTLNEF-AKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + ++EF  ++  +  ++++SG N  +E    L ++L  N    +++ + N  +  G 
Sbjct: 160 EGARIISEFLQRDASSIWNLELSGNNLKEESAELLCQALSTNYRIRKLNLSHNQFSDLGG 219

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N+ L +L+LS N     G   LC+ L  N  +++L L      +EGA A+ 
Sbjct: 220 EHLGQMLAINVGLTSLDLSWNQFHIRGAMALCNGLRANLTLKKLDLFMNGFGNEGALALG 279

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           ++L+ NS L  L++ +N I                            G  GA+ +++GLE
Sbjct: 280 DVLRLNSSLVYLDVGSNSI----------------------------GNDGASKISRGLE 311

Query: 328 GNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGN 368
            N++L+ L L  N I  +G +  ++S   + K ++  LDI N
Sbjct: 312 ANETLKVLKLFLNPISMDGALLLILSIKRNPKSRMEELDISN 353


>gi|119622740|gb|EAX02335.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_c [Homo sapiens]
          Length = 466

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 173/396 (43%), Gaps = 6/396 (1%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L   Q  + V     G+T A  K     L+ N AL  LNL  N +GD GV C+   L
Sbjct: 26  AELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGL 85

Query: 243 -VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
              +  +++L L +  L   G   ++  L+    L+ L L++N++  +G   L E LL+ 
Sbjct: 86  QTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDP 145

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL +  N I + G+R L  GL     +
Sbjct: 146 QCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQ 205

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITT 419
           L  L + +  +++     +   + +  SL  + L  N +GD G AE     L  +  + T
Sbjct: 206 LEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRT 265

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + +    I +KG   + RVL+    +  L LA N +G +GA+ L E L   G  + +L +
Sbjct: 266 LWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 325

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
             C   A+     + +L  N  +  L +  N L D G + L Q        L  + LA  
Sbjct: 326 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 385

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           ++ D    ++A  L AN   ++  L+L+NN L   G
Sbjct: 386 DVSDSSCSSLAATLLANH--SLRELDLSNNCLGDAG 419



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 180/389 (46%), Gaps = 8/389 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 62  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 121

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 122 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 181

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 182 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 241

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 242 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 301

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 302 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 361

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D G  
Sbjct: 362 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 421

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDD 543
            L +S +    + E L   D+ ++E  +D
Sbjct: 422 QLVESVRQPGCLLEQLVLYDIYWSEEMED 450



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 230 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 279

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 280 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 339

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 340 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 399

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 400 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 435


>gi|15029922|gb|AAH11186.1| RNH1 protein, partial [Homo sapiens]
          Length = 447

 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 173/396 (43%), Gaps = 6/396 (1%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L   Q  + V     G+T A  K     L+ N AL  LNL  N +GD GV C+   L
Sbjct: 7   AELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGL 66

Query: 243 -VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
              +  +++L L +  L   G   ++  L+    L+ L L++N++  +G   L E LL+ 
Sbjct: 67  QTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDP 126

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL +  N I + G+R L  GL     +
Sbjct: 127 QCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQ 186

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITT 419
           L  L + +  +++     +   + +  SL  + L  N +GD G AE     L  +  + T
Sbjct: 187 LEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRT 246

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + +    I +KG   + RVL+    +  L LA N +G +GA+ L E L   G  + +L +
Sbjct: 247 LWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 306

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
             C   A+     + +L  N  +  L +  N L D G + L Q        L  + LA  
Sbjct: 307 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 366

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           ++ D    ++A  L AN   ++  L+L+NN L   G
Sbjct: 367 DVSDSSCSSLAATLLANH--SLRELDLSNNCLGDAG 400



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 180/389 (46%), Gaps = 8/389 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 43  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 102

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 103 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 162

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 163 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 222

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 223 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 282

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 283 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 342

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D G  
Sbjct: 343 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 402

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDD 543
            L +S +    + E L   D+ ++E  +D
Sbjct: 403 QLVESVRQPGCLLEQLVLYDIYWSEEMED 431



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 211 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 260

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 261 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 320

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 321 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 380

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 381 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 416


>gi|163914891|ref|NP_001106443.1| leucine rich repeat containing 34 [Xenopus (Silurana) tropicalis]
 gi|157423135|gb|AAI53733.1| LOC100127617 protein [Xenopus (Silurana) tropicalis]
          Length = 409

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 165/339 (48%), Gaps = 20/339 (5%)

Query: 149 ESKQTLNEFAKELRA--------FSSVDMSGRN-------FGDEGLFFLAESLGYNQTAE 193
           E  Q +N F  E+ +         S++ + G N         DE    LA+ L  N    
Sbjct: 15  EQNQPINPFIAEILSQTEEQELYASTLKLCGNNRLVQVQRVSDEDFLVLAQVLSKNSFIT 74

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +    N +T  G       LQ+N ++  LN+ GN IG +G + +   L  N  +  L++
Sbjct: 75  NLDLRYNRVTDNGAAHIATFLQNNSSVLCLNIMGNEIGTDGSEHITKALHRNTTLLSLRM 134

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           +   + ++G    A +L+ NS L  L+L +  +      +LA  LL+N T++SL+LN   
Sbjct: 135 TGDKIGNKGGMLFASMLQINSTLEELDLGDCDLGIQSLIALATVLLQNKTLKSLNLNRPI 194

Query: 314 GGALGANA---LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
              +  +    L++ L  N +L+ELHL  + I D G++ L   L      L  L++  N 
Sbjct: 195 FYVMQEDTTVHLSEMLRVNSTLQELHLSKHEITDFGVQRLCDALHENH-TLKYLNLSCNK 253

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHS 429
           I+  G  ++AE +K  K+L  ++L  N + D+GA  +A+A+   NR++  + +  NNI  
Sbjct: 254 ITRDGVKYLAEVLKINKTLEILDLASNRMEDDGALYLAEAIYLYNRSLKALSVVSNNISG 313

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           KG  A+A  +K N+ +  + +  N I  + + A S++L+
Sbjct: 314 KGLQALAAAIKANNCLLYIYIWGNKINQEASMAFSQLLQ 352



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 152/313 (48%), Gaps = 10/313 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+      D G   +A  L  N +   ++   N I   G +     L  N  L +L
Sbjct: 73  ITNLDLRYNRVTDNGAAHIATFLQNNSSVLCLNIMGNEIGTDGSEHITKALHRNTTLLSL 132

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            ++G+ IG++G      +L  N+ +E L L   DL  +   A+A +L  N  L+ L LN 
Sbjct: 133 RMTGDKIGNKGGMLFASMLQINSTLEELDLGDCDLGIQSLIALATVLLQNKTLKSLNLNR 192

Query: 284 NM---IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            +   +       L+E L  NST++ LHL+ +     G   L   L  N +L+ L+L  N
Sbjct: 193 PIFYVMQEDTTVHLSEMLRVNSTLQELHLSKHEITDFGVQRLCDALHENHTLKYLNLSCN 252

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMND 398
            I  +G++ L   L   K  L +LD+ +N +   GA ++AE  Y+ N +SL  +++  N+
Sbjct: 253 KITRDGVKYLAEVLKINK-TLEILDLASNRMEDDGALYLAEAIYLYN-RSLKALSVVSNN 310

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I  +G + +A A+K N  +  I + GN I+ + + A +++L+    ++S      P   D
Sbjct: 311 ISGKGLQALAAAIKANNCLLYIYIWGNKINQEASMAFSQLLQSGR-LSSSSTDVQPYVVD 369

Query: 459 GAKALSEVLKFHG 471
           G   L+E+  FHG
Sbjct: 370 GRVCLAEI--FHG 380



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 118/242 (48%), Gaps = 33/242 (13%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DE    L   LS +   +  LD+  N ++  GA H+A +++N  S+L +N+  N+IG 
Sbjct: 55  VSDEDFLVLAQVLS-KNSFITNLDLRYNRVTDNGAAHIATFLQNNSSVLCLNIMGNEIGT 113

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG----- 456
           +G+E I  AL +N T+ ++ + G+ I +KG    A +L+ NS +  LDL    +G     
Sbjct: 114 DGSEHITKALHRNTTLLSLRMTGDKIGNKGGMLFASMLQINSTLEELDLGDCDLGIQSLI 173

Query: 457 --------------------------ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
                                      D    LSE+L+ +  +  L L   +I   G + 
Sbjct: 174 ALATVLLQNKTLKSLNLNRPIFYVMQEDTTVHLSEMLRVNSTLQELHLSKHEITDFGVQR 233

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           + D L  N+T+  L+L  N +  +G K LA+  K +N+ L  +DLA N + DDGA  +A+
Sbjct: 234 LCDALHENHTLKYLNLSCNKITRDGVKYLAEVLK-INKTLEILDLASNRMEDDGALYLAE 292

Query: 551 AL 552
           A+
Sbjct: 293 AI 294



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 146/291 (50%), Gaps = 9/291 (3%)

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           +L  NN +++V  +++       F  LA+ L +NS I +L L  N     GA  +A  L+
Sbjct: 42  KLCGNNRLVQVQRVSD-----EDFLVLAQVLSKNSFITNLDLRYNRVTDNGAAHIATFLQ 96

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            N S+  L++ GN IG +G   +   L  R   L  L +  + I  KG    A  ++   
Sbjct: 97  NNSSVLCLNIMGNEIGTDGSEHITKALH-RNTTLLSLRMTGDKIGNKGGMLFASMLQINS 155

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG---NNIHSKGASAIARVLKDNSV 444
           +L  ++L   D+G +    +A  L QN+T+ +++L       +       ++ +L+ NS 
Sbjct: 156 TLEELDLGDCDLGIQSLIALATVLLQNKTLKSLNLNRPIFYVMQEDTTVHLSEMLRVNST 215

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L+ + I   G + L + L  +  +  L L   +I   G +++A++L+ N T+ IL
Sbjct: 216 LQELHLSKHEITDFGVQRLCDALHENHTLKYLNLSCNKITRDGVKYLAEVLKINKTLEIL 275

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           DL +N + D+GA  LA++  + N +L ++ +  N I   G  A+A A+KAN
Sbjct: 276 DLASNRMEDDGALYLAEAIYLYNRSLKALSVVSNNISGKGLQALAAAIKAN 326



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG-YNQTAEEVSFAANGIT 203
           K+ R+  + L E  K  +    +D++     D+G  +LAE++  YN++ + +S  +N I+
Sbjct: 253 KITRDGVKYLAEVLKINKTLEILDLASNRMEDDGALYLAEAIYLYNRSLKALSVVSNNIS 312

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD--- 260
             G++A    +++N  L  + + GN I  E       +L   +G  RL  SS D++    
Sbjct: 313 GKGLQALAAAIKANNCLLYIYIWGNKINQEASMAFSQLL--QSG--RLSSSSTDVQPYVV 368

Query: 261 EGAKAIAELL 270
           +G   +AE+ 
Sbjct: 369 DGRVCLAEIF 378


>gi|3892017|pdb|1A4Y|A Chain A, Ribonuclease Inhibitor-Angiogenin Complex
 gi|3892019|pdb|1A4Y|D Chain D, Ribonuclease Inhibitor-Angiogenin Complex
 gi|62738925|pdb|2BEX|A Chain A, Crystal Structure Of Placental Ribonuclease Inhibitor In
           Complex With Human Eosinophil Derived Neurotoxin At 2a
           Resolution
 gi|62738926|pdb|2BEX|B Chain B, Crystal Structure Of Placental Ribonuclease Inhibitor In
           Complex With Human Eosinophil Derived Neurotoxin At 2a
           Resolution
          Length = 460

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 178/415 (42%), Gaps = 9/415 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 4   IQSLDIQCEELSDA---RWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 60

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 61  NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 120

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 121 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 180

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 181 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 240

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 241 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 300

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D G + L
Sbjct: 301 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 360

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            Q        L  + LA  ++ D    ++A  L AN   ++  L+L+NN L   G
Sbjct: 361 CQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANH--SLRELDLSNNCLGDAG 413



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 180/389 (46%), Gaps = 8/389 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 56  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 115

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 116 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 175

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 176 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 235

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 236 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 295

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 296 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 355

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D G  
Sbjct: 356 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 415

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDD 543
            L +S +    + E L   D+ ++E  +D
Sbjct: 416 QLVESVRQPGCLLEQLVLYDIYWSEEMED 444



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 224 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 273

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 274 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 333

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 334 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 393

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 394 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 429


>gi|21361547|ref|NP_002930.2| ribonuclease inhibitor [Homo sapiens]
 gi|42794608|ref|NP_976318.1| ribonuclease inhibitor [Homo sapiens]
 gi|42822864|ref|NP_976322.1| ribonuclease inhibitor [Homo sapiens]
 gi|42822866|ref|NP_976323.1| ribonuclease inhibitor [Homo sapiens]
 gi|42822868|ref|NP_976321.1| ribonuclease inhibitor [Homo sapiens]
 gi|42822870|ref|NP_976320.1| ribonuclease inhibitor [Homo sapiens]
 gi|42822872|ref|NP_976317.1| ribonuclease inhibitor [Homo sapiens]
 gi|42822874|ref|NP_976319.1| ribonuclease inhibitor [Homo sapiens]
 gi|132573|sp|P13489.2|RINI_HUMAN RecName: Full=Ribonuclease inhibitor; AltName: Full=Placental
           ribonuclease inhibitor; Short=Placental RNase inhibitor;
           AltName: Full=Ribonuclease/angiogenin inhibitor 1;
           Short=RAI
 gi|71042209|pdb|1Z7X|W Chain W, X-Ray Structure Of Human Ribonuclease Inhibitor Complexed
           With Ribonuclease I
 gi|71042211|pdb|1Z7X|Y Chain Y, X-Ray Structure Of Human Ribonuclease Inhibitor Complexed
           With Ribonuclease I
 gi|150261498|pdb|2Q4G|W Chain W, Ensemble Refinement Of The Protein Crystal Structure Of
           Human Ribonuclease Inhibitor Complexed With Ribonuclease
           I
 gi|150261500|pdb|2Q4G|Y Chain Y, Ensemble Refinement Of The Protein Crystal Structure Of
           Human Ribonuclease Inhibitor Complexed With Ribonuclease
           I
 gi|307040|gb|AAA59130.1| ribonuclease inhibitor precursor [Homo sapiens]
 gi|7328056|emb|CAB82310.1| hypothetical protein [Homo sapiens]
 gi|15079321|gb|AAH11500.1| Ribonuclease/angiogenin inhibitor 1 [Homo sapiens]
 gi|15779129|gb|AAH14629.1| Ribonuclease/angiogenin inhibitor 1 [Homo sapiens]
 gi|28839291|gb|AAH47730.1| Ribonuclease/angiogenin inhibitor 1 [Homo sapiens]
 gi|226786|prf||1605207A RNase inhibitor
          Length = 461

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 178/415 (42%), Gaps = 9/415 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSDA---RWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D G + L
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 361

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            Q        L  + LA  ++ D    ++A  L AN   ++  L+L+NN L   G
Sbjct: 362 CQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANH--SLRELDLSNNCLGDAG 414



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 180/389 (46%), Gaps = 8/389 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D G  
Sbjct: 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 416

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDD 543
            L +S +    + E L   D+ ++E  +D
Sbjct: 417 QLVESVRQPGCLLEQLVLYDIYWSEEMED 445



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 395 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430


>gi|290972120|ref|XP_002668808.1| predicted protein [Naegleria gruberi]
 gi|284082332|gb|EFC36064.1| predicted protein [Naegleria gruberi]
          Length = 329

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 197/376 (52%), Gaps = 74/376 (19%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD-----EGAKAIAELLKNNS 274
           L +L++  N IG EG K +          E  QL+S+D+       EGAK I+E+     
Sbjct: 4   LTSLDMHSNEIGVEGSKYIS---------EMKQLTSLDIYSNEIGVEGAKYISEMKS--- 51

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L++++N I   G   ++E       + SL++        G N +  G+EG+K + E
Sbjct: 52  -LTSLDIHSNEIGVEGSKYISEM----KQLTSLNI--------GYNQI--GVEGSKYISE 96

Query: 335 LH------LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           ++      +H N IG EG + +     S   +L  L+IG N IS +GA    +YI   KS
Sbjct: 97  MNQLTSLDIHSNEIGVEGSKYI-----SEMKQLTSLNIGYNQISVEGA----KYISGMKS 147

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  + +  N IG EG++ I++ +KQ   +T++++G N I  +GA  I+ +      +TSL
Sbjct: 148 LTSLYIGYNQIGVEGSKYISE-MKQ---LTSLNIGHNEIGEEGAKYISGM----KSLTSL 199

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           ++ YN IG +G+K +SE+ +    + +L +G  +I   G+++++ M     +++ L++  
Sbjct: 200 NIGYNQIGVEGSKYISEMKQ----LTSLNIGHNEISVEGSKYISGM----KSLTSLNIGY 251

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           N +  EG+K +++      + LTS+++ +NEI  +GA  I+  +K     ++TSLN+  N
Sbjct: 252 NQIGVEGSKYISEM-----KQLTSLNIGYNEIGVEGAKYIS-GMK-----SLTSLNIGYN 300

Query: 569 FLTKFGQSALTDAKDL 584
            +   G   +++ K L
Sbjct: 301 QIGVEGSKYISEMKQL 316



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 49/266 (18%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAE-------SLGYNQTAEE-------------VS 196
           +  E+   +S+D+     G EG  +++E       ++GYNQ + E             + 
Sbjct: 93  YISEMNQLTSLDIHSNEIGVEGSKYISEMKQLTSLNIGYNQISVEGAKYISGMKSLTSLY 152

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
              N I   G K    + Q    L +LN+  N IG+EG K +  +      +  L +   
Sbjct: 153 IGYNQIGVEGSKYISEMKQ----LTSLNIGHNEIGEEGAKYISGM----KSLTSLNIGYN 204

Query: 257 DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
            +  EG+K I+E+ +    L  L + +N I   G   ++       ++ SL++  N  G 
Sbjct: 205 QIGVEGSKYISEMKQ----LTSLNIGHNEISVEGSKYISGM----KSLTSLNIGYNQIGV 256

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            G+  +++     K L  L++  N IG EG + + SG+ S    L  L+IG N I  +G+
Sbjct: 257 EGSKYISE----MKQLTSLNIGYNEIGVEGAKYI-SGMKS----LTSLNIGYNQIGVEGS 307

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDE 402
               +YI   K L  +N+  N+IG+E
Sbjct: 308 ----KYISEMKQLTSLNIGHNEIGEE 329


>gi|119622735|gb|EAX02330.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Homo sapiens]
 gi|119622736|gb|EAX02331.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Homo sapiens]
 gi|119622738|gb|EAX02333.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Homo sapiens]
 gi|119622739|gb|EAX02334.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Homo sapiens]
 gi|119622741|gb|EAX02336.1| ribonuclease/angiogenin inhibitor 1, isoform CRA_a [Homo sapiens]
          Length = 456

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 173/396 (43%), Gaps = 6/396 (1%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L   Q  + V     G+T A  K     L+ N AL  LNL  N +GD GV C+   L
Sbjct: 16  AELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGL 75

Query: 243 -VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
              +  +++L L +  L   G   ++  L+    L+ L L++N++  +G   L E LL+ 
Sbjct: 76  QTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL +  N I + G+R L  GL     +
Sbjct: 136 QCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQ 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITT 419
           L  L + +  +++     +   + +  SL  + L  N +GD G AE     L  +  + T
Sbjct: 196 LEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRT 255

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + +    I +KG   + RVL+    +  L LA N +G +GA+ L E L   G  + +L +
Sbjct: 256 LWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 315

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
             C   A+     + +L  N  +  L +  N L D G + L Q        L  + LA  
Sbjct: 316 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 375

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           ++ D    ++A  L AN   ++  L+L+NN L   G
Sbjct: 376 DVSDSSCSSLAATLLANH--SLRELDLSNNCLGDAG 409



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 180/389 (46%), Gaps = 8/389 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 52  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 112 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 172 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 232 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 291

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 292 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 351

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D G  
Sbjct: 352 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 411

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDD 543
            L +S +    + E L   D+ ++E  +D
Sbjct: 412 QLVESVRQPGCLLEQLVLYDIYWSEEMED 440



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 220 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 269

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 270 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 329

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 330 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 389

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 390 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 425


>gi|443700630|gb|ELT99510.1| hypothetical protein CAPTEDRAFT_172553 [Capitella teleta]
          Length = 509

 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 118/246 (47%), Gaps = 31/246 (12%)

Query: 312 NYG-GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           N+G G LGA A++K LE N  +  L L GNSI                            
Sbjct: 102 NHGLGPLGAKAISKPLESNTHIERLDLEGNSI---------------------------- 133

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
             A GA H++  ++    +  + L  N +G  GA+ + + L  N TI+ +DL GN++   
Sbjct: 134 -EADGAIHISRVLRENLYVNHLVLSENKLGTRGAQAVCEMLHDNHTISNLDLSGNDLKDT 192

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
                  +L +NS + +L L +N    D A+ L E L  + N+  L L W  +   GA++
Sbjct: 193 DGEHFYNLLTNNSTLNTLHLKHNKFEVDAARWLKEALTQNENLKILDLSWNHLRMRGAQY 252

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           +ADM+  N  +  L+L  NG+ +EGA+ +  +    N+ L  ++++ N I  +GA  I++
Sbjct: 253 IADMVMENYGLKYLNLSMNGMGEEGARAIGHALS-HNQCLQELNISANRITMEGALQISR 311

Query: 551 ALKANE 556
            L  NE
Sbjct: 312 GLLVNE 317



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 1/247 (0%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            Q +I  ++  +  + +G  G K +   L  N  +ERL L    +  +GA  I+ +L+ N
Sbjct: 89  FQRHIQDRSFIMRNHGLGPLGAKAISKPLESNTHIERLDLEGNSIEADGAIHISRVLREN 148

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             +  L L+ N +   G  ++ E L +N TI +L L+GN             L  N +L 
Sbjct: 149 LYVNHLVLSENKLGTRGAQAVCEMLHDNHTISNLDLSGNDLKDTDGEHFYNLLTNNSTLN 208

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            LHL  N    +  R L   L+  +  L +LD+  N +  +GA ++A+ +     L ++N
Sbjct: 209 TLHLKHNKFEVDAARWLKEALTQNEN-LKILDLSWNHLRMRGAQYIADMVMENYGLKYLN 267

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L MN +G+EGA  I  AL  N+ +  +++  N I  +GA  I+R L  N V+ +L +  N
Sbjct: 268 LSMNGMGEEGARAIGHALSHNQCLQELNISANRITMEGALQISRGLLVNEVLETLRIGTN 327

Query: 454 PIGADGA 460
           PIG +G+
Sbjct: 328 PIGTEGS 334



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 129/268 (48%), Gaps = 4/268 (1%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F + ++  S + M     G  G   +++ L  N   E +    N I A G      VL+ 
Sbjct: 89  FQRHIQDRSFI-MRNHGLGPLGAKAISKPLESNTHIERLDLEGNSIEADGAIHISRVLRE 147

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+ +  L LS N +G  G + +C++L DN  +  L LS  DL+D   +    LL NNS L
Sbjct: 148 NLYVNHLVLSENKLGTRGAQAVCEMLHDNHTISNLDLSGNDLKDTDGEHFYNLLTNNSTL 207

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L +N  +      L EAL +N  ++ L L+ N+    GA  +A  +  N  L+ L+
Sbjct: 208 NTLHLKHNKFEVDAARWLKEALTQNENLKILDLSWNHLRMRGAQYIADMVMENYGLKYLN 267

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N +G+EG RA+   LS  +  L  L+I  N I+ +GA  ++  +   + L  + +  
Sbjct: 268 LSMNGMGEEGARAIGHALSHNQC-LQELNISANRITMEGALQISRGLLVNEVLETLRIGT 326

Query: 397 NDIGDEGAEKIADALKQNRT--ITTIDL 422
           N IG EG+  +  A+ +N    I  +DL
Sbjct: 327 NPIGTEGSYHVIAAVDKNSNSCIQVLDL 354



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 146/331 (44%), Gaps = 65/331 (19%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GAKAI++ L++N+ +  L+L  N I+  G   ++  L EN  +  L L+ N  G  GA A
Sbjct: 109 GAKAISKPLESNTHIERLDLEGNSIEADGAIHISRVLRENLYVNHLVLSENKLGTRGAQA 168

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           + + L  N ++  L L GN + D                                 H   
Sbjct: 169 VCEMLHDNHTISNLDLSGNDLKD-----------------------------TDGEHFYN 199

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            + N  +L  ++L  N    + A  + +AL QN  +  +DL  N++  +GA  IA ++ +
Sbjct: 200 LLTNNSTLNTLHLKHNKFEVDAARWLKEALTQNENLKILDLSWNHLRMRGAQYIADMVME 259

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  +  L+L+ N +G +GA+A+   L                             +N  +
Sbjct: 260 NYGLKYLNLSMNGMGEEGARAIGHALS----------------------------HNQCL 291

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
             L++ AN +  EGA  +++   +VNE L ++ +  N I  +G++ +  A+  N +  + 
Sbjct: 292 QELNISANRITMEGALQISRGL-LVNEVLETLRIGTNPIGTEGSYHVIAAVDKNSNSCIQ 350

Query: 562 SLNLANNFLTKFGQSALTDAKDLVYEMSEKE 592
            L+L N  +++       D +DLV +M +++
Sbjct: 351 VLDLTNIIVSQ-------DFEDLVDKMHDED 374



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 82/185 (44%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL     Q + E   +    S++D+SG +  D         L  N T   +    N    
Sbjct: 160 KLGTRGAQAVCEMLHDNHTISNLDLSGNDLKDTDGEHFYNLLTNNSTLNTLHLKHNKFEV 219

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
              +     L  N  LK L+LS N +   G + + D++++N G++ L LS   + +EGA+
Sbjct: 220 DAARWLKEALTQNENLKILDLSWNHLRMRGAQYIADMVMENYGLKYLNLSMNGMGEEGAR 279

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AI   L +N  L+ L ++ N I   G   ++  LL N  + +L +  N  G  G+  +  
Sbjct: 280 AIGHALSHNQCLQELNISANRITMEGALQISRGLLVNEVLETLRIGTNPIGTEGSYHVIA 339

Query: 325 GLEGN 329
            ++ N
Sbjct: 340 AVDKN 344


>gi|330789901|ref|XP_003283037.1| hypothetical protein DICPUDRAFT_96244 [Dictyostelium purpureum]
 gi|325087109|gb|EGC40490.1| hypothetical protein DICPUDRAFT_96244 [Dictyostelium purpureum]
          Length = 581

 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 159/295 (53%), Gaps = 8/295 (2%)

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S + S++L  N  G +G   LAK LE N+S++ L L    +G +  + L   L      +
Sbjct: 156 SCLTSINLFSNKIGDVGFERLAKALETNESIKFLGLSYCGLGSKSGKPL-GQLFKNNSTI 214

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             + +  NS+   G   +A+ +   KSL  ++L  N+IGDEGA++I  AL QN+TI  +D
Sbjct: 215 REIILSYNSLGKTGTIEMAKGLPYTKSLFKLSLSHNEIGDEGAKEIGSALSQNKTIKELD 274

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N+I S G++ I + LKDN  +  +DL  N +G DGA  +   L+ + +I ++ L   
Sbjct: 275 LRCNSIGSMGSNYICQYLKDNISLVEIDLWGNLLGNDGASGIGMALQSNKSIKSINLTRN 334

Query: 482 QIGASGAEFVADMLRYN-NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            I   G +F+ + L  +  +I  +DL +N L  EGAK ++++    N ++ +I+L+ N+ 
Sbjct: 335 SIQEQGIKFITNALSLSVCSIVTIDLSSNQLGLEGAKQISKAIS-QNRSIENINLSSNKF 393

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 595
             D +  +  +L +N+   + +LNL+ N     G++       ++ E + KE+N+
Sbjct: 394 DSDASKILCTSLLSNK--TIKTLNLSMN---DIGENGCIYFYQILKETNLKELNL 443



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 155/315 (49%), Gaps = 28/315 (8%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           +N F++     +S+++     GD G   LA++L  N++ + +  +  G+ +   K    +
Sbjct: 148 INVFSRPSSCLTSINLFSNKIGDVGFERLAKALETNESIKFLGLSYCGLGSKSGKPLGQL 207

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
            ++N  ++ + LS N +G  G   +   L     + +L LS  ++ DEGAK I   L  N
Sbjct: 208 FKNNSTIREIILSYNSLGKTGTIEMAKGLPYTKSLFKLSLSHNEIGDEGAKEIGSALSQN 267

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             ++ L+L  N I   G   + + L +N ++  + L GN  G  GA+ +   L+ NKS++
Sbjct: 268 KTIKELDLRCNSIGSMGSNYICQYLKDNISLVEIDLWGNLLGNDGASGIGMALQSNKSIK 327

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            ++L  NSI ++GI+ + + LS     L+V                      C S++ I+
Sbjct: 328 SINLTRNSIQEQGIKFITNALS-----LSV----------------------C-SIVTID 359

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N +G EGA++I+ A+ QNR+I  I+L  N   S  +  +   L  N  I +L+L+ N
Sbjct: 360 LSSNQLGLEGAKQISKAISQNRSIENINLSSNKFDSDASKILCTSLLSNKTIKTLNLSMN 419

Query: 454 PIGADGAKALSEVLK 468
            IG +G     ++LK
Sbjct: 420 DIGENGCIYFYQILK 434



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 3/252 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           +S + L +  K       + +S  + G  G   +A+ L Y ++  ++S + N I   G K
Sbjct: 199 KSGKPLGQLFKNNSTIREIILSYNSLGKTGTIEMAKGLPYTKSLFKLSLSHNEIGDEGAK 258

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                L  N  +K L+L  N IG  G   +C  L DN  +  + L    L ++GA  I  
Sbjct: 259 EIGSALSQNKTIKELDLRCNSIGSMGSNYICQYLKDNISLVEIDLWGNLLGNDGASGIGM 318

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLE 327
            L++N  ++ + L  N I   G   +  AL L   +I ++ L+ N  G  GA  ++K + 
Sbjct: 319 ALQSNKSIKSINLTRNSIQEQGIKFITNALSLSVCSIVTIDLSSNQLGLEGAKQISKAIS 378

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            N+S+  ++L  N    +  + L + L S K  +  L++  N I   G  +  + +K   
Sbjct: 379 QNRSIENINLSSNKFDSDASKILCTSLLSNKT-IKTLNLSMNDIGENGCIYFYQILKET- 436

Query: 388 SLLWINLYMNDI 399
           +L  +NL +N I
Sbjct: 437 NLKELNLSLNKI 448


>gi|35844|emb|CAA32151.1| unnamed protein product [Homo sapiens]
 gi|190848|gb|AAA60249.1| ribonuclease/angiogenin inhibitor [Homo sapiens]
          Length = 461

 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 178/415 (42%), Gaps = 9/415 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSDA---RWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D G + L
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 361

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            Q        L  + LA  ++ D    ++A  L AN   ++  L+L+NN L   G
Sbjct: 362 CQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANH--SLRELDLSNNCLGDAG 414



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 179/389 (46%), Gaps = 8/389 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D G  
Sbjct: 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 416

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDD 543
            L +S      + E L   D+ ++E  +D
Sbjct: 417 QLVESVSEPGCLLEQLVLYDIYWSEEMED 445



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 41/200 (20%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394

Query: 299 LENSTIRSLHLNGNYGGALG 318
           L N ++R L L+ N  G  G
Sbjct: 395 LANHSLRELDLSNNCLGDAG 414


>gi|320169698|gb|EFW46597.1| hypothetical protein CAOG_04555 [Capsaspora owczarzaki ATCC 30864]
          Length = 640

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 6/213 (2%)

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
           R L     +  G+L    +  + I  + A  +AE +K   +L+ ++L+ N IGD GA  I
Sbjct: 11  RELYDQFKNASGRLL---LHKSQIGDEEAKAIAEALKVNTTLIQLSLWANRIGDAGARAI 67

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           A+ALK N T+T + L  N I   GA AIA  LK N  +T + L  N IG DGA A++E  
Sbjct: 68  AEALKMNTTLTELGLHQNQIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDDGALAIAEAH 127

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
           K +  +  L L   QIG +GA  +AD L+ N T++ + L  N + D GA+  A++ K VN
Sbjct: 128 KVNTTLTKLSLWANQIGDAGARAIADALKVNTTLTTVYLHQNQIGDAGAQANAEALK-VN 186

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           + LT ++L+ N + + G  A+ Q   AN D  V
Sbjct: 187 KTLTRLNLSQNFLTNVGIIALRQT--ANTDCNV 217



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 111/208 (53%), Gaps = 9/208 (4%)

Query: 150 SKQTLNEFAKELR-AFSSVDMSGR------NFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           S Q +N+  +EL   F +   SGR        GDE    +AE+L  N T  ++S  AN I
Sbjct: 2   SYQNMNQRQRELYDQFKNA--SGRLLLHKSQIGDEEAKAIAEALKVNTTLIQLSLWANRI 59

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
             AG +A    L+ N  L  L L  N IGD G + + + L  N  V ++ L S  + D+G
Sbjct: 60  GDAGARAIAEALKMNTTLTELGLHQNQIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDDG 119

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A AIAE  K N+ L  L L  N I  +G  ++A+AL  N+T+ +++L+ N  G  GA A 
Sbjct: 120 ALAIAEAHKVNTTLTKLSLWANQIGDAGARAIADALKVNTTLTTVYLHQNQIGDAGAQAN 179

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           A+ L+ NK+L  L+L  N + + GI AL
Sbjct: 180 AEALKVNKTLTRLNLSQNFLTNVGIIAL 207



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 29/211 (13%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  + IGDE  K + + L  N  + +L L +  + D GA+AIAE LK N+ L  L L+ N
Sbjct: 26  LHKSQIGDEEAKAIAEALKVNTTLIQLSLWANRIGDAGARAIAEALKMNTTLTELGLHQN 85

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I  +G  ++AE+L  N T+  ++L  N  G  GA A+A+  + N +L +L L  N IGD
Sbjct: 86  QIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDDGALAIAEAHKVNTTLTKLSLWANQIGD 145

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G RA                             +A+ +K   +L  + L+ N IGD GA
Sbjct: 146 AGARA-----------------------------IADALKVNTTLTTVYLHQNQIGDAGA 176

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           +  A+ALK N+T+T ++L  N + + G  A+
Sbjct: 177 QANAEALKVNKTLTRLNLSQNFLTNVGIIAL 207



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 97/190 (51%), Gaps = 32/190 (16%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  + I  + A AIA  LK N+ +  L L  N IG  GA+A++E LK +  +  L L   
Sbjct: 26  LHKSQIGDEEAKAIAEALKVNTTLIQLSLWANRIGDAGARAIAEALKMNTTLTELGLHQN 85

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           QIG +GA+ +A+ L+ N T++ + L +N + D+GA  +A++ KV N  LT + L  N+I 
Sbjct: 86  QIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDDGALAIAEAHKV-NTTLTKLSLWANQIG 144

Query: 542 DDGAFAIAQALKANEDV--------------------------AVTSLNLANNFLTKFG- 574
           D GA AIA ALK N  +                           +T LNL+ NFLT  G 
Sbjct: 145 DAGARAIADALKVNTTLTTVYLHQNQIGDAGAQANAEALKVNKTLTRLNLSQNFLTNVGI 204

Query: 575 ----QSALTD 580
               Q+A TD
Sbjct: 205 IALRQTANTD 214



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 85/168 (50%), Gaps = 1/168 (0%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           KA    L+ N  L  L+L  N IGD G + + + L  N  +  L L    + D GA+AIA
Sbjct: 37  KAIAEALKVNTTLIQLSLWANRIGDAGARAIAEALKMNTTLTELGLHQNQIGDAGAQAIA 96

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E LK N  +  + L +N I   G  ++AEA   N+T+  L L  N  G  GA A+A  L+
Sbjct: 97  ESLKVNKTVTKIYLYSNQIGDDGALAIAEAHKVNTTLTKLSLWANQIGDAGARAIADALK 156

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
            N +L  ++LH N IGD G +A    L   K  L  L++  N ++  G
Sbjct: 157 VNTTLTTVYLHQNQIGDAGAQANAEALKVNK-TLTRLNLSQNFLTNVG 203



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 3/127 (2%)

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG + AKA++E LK +  +  L L   +IG +GA  +A+ L+ N T++ L L  N + D 
Sbjct: 31  IGDEEAKAIAEALKVNTTLIQLSLWANRIGDAGARAIAEALKMNTTLTELGLHQNQIGDA 90

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           GA+ +A+S KV N+ +T I L  N+I DDGA AIA+A K N    +T L+L  N +   G
Sbjct: 91  GAQAIAESLKV-NKTVTKIYLYSNQIGDDGALAIAEAHKVN--TTLTKLSLWANQIGDAG 147

Query: 575 QSALTDA 581
             A+ DA
Sbjct: 148 ARAIADA 154



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 7/187 (3%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMS-------GRNFGDEGLFFLAESLGYNQTAEEV 195
           +G+L     Q  +E AK +     V+ +           GD G   +AE+L  N T  E+
Sbjct: 21  SGRLLLHKSQIGDEEAKAIAEALKVNTTLIQLSLWANRIGDAGARAIAEALKMNTTLTEL 80

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               N I  AG +A    L+ N  +  + L  N IGD+G   + +    N  + +L L +
Sbjct: 81  GLHQNQIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDDGALAIAEAHKVNTTLTKLSLWA 140

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + D GA+AIA+ LK N+ L  + L+ N I  +G  + AEAL  N T+  L+L+ N+  
Sbjct: 141 NQIGDAGARAIADALKVNTTLTTVYLHQNQIGDAGAQANAEALKVNKTLTRLNLSQNFLT 200

Query: 316 ALGANAL 322
            +G  AL
Sbjct: 201 NVGIIAL 207



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 58/124 (46%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             GD G   +AESL  N+T  ++   +N I   G  A     + N  L  L+L  N IGD
Sbjct: 86  QIGDAGAQAIAESLKVNKTVTKIYLYSNQIGDDGALAIAEAHKVNTTLTKLSLWANQIGD 145

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + + D L  N  +  + L    + D GA+A AE LK N  L  L L+ N +   G  
Sbjct: 146 AGARAIADALKVNTTLTTVYLHQNQIGDAGAQANAEALKVNKTLTRLNLSQNFLTNVGII 205

Query: 293 SLAE 296
           +L +
Sbjct: 206 ALRQ 209


>gi|326434106|gb|EGD79676.1| hypothetical protein PTSG_10661 [Salpingoeca sp. ATCC 50818]
          Length = 1538

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 121/241 (50%), Gaps = 30/241 (12%)

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           LN    G +GA A+A+ L+ N  L+ L+LH NSIG E                       
Sbjct: 43  LNNARLGVIGARAVAEALKDNTCLKRLYLHNNSIGPE----------------------- 79

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
                 GA  +AE +K+  +L W++L  N IG +GA  +A+ LK N  +T + L  N+I 
Sbjct: 80  ------GAVALAEMLKHNTALTWLSLGDNSIGGQGAVVLAEMLKHNTALTWLSLYNNSIG 133

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            +GA A+A +L+ N+ + +LDL  N IG +GA AL+E+LK +  +  L L    IG  GA
Sbjct: 134 DEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVALAEMLKHNTTLEKLNLWDNSIGDEGA 193

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
             +A +L++N T+ IL+L  N +   G   L  +    N  L  +++  N      AF  
Sbjct: 194 VALAKVLKHNTTLEILNLTKNSITPVGGAALGAALD-QNRTLKKLNIERNSTATARAFGA 252

Query: 549 A 549
           A
Sbjct: 253 A 253



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 112/203 (55%), Gaps = 3/203 (1%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + N  +   GA  VAE +K+   L  + L+ N IG EGA  +A+ LK N  +T + LG N
Sbjct: 43  LNNARLGVIGARAVAEALKDNTCLKRLYLHNNSIGPEGAVALAEMLKHNTALTWLSLGDN 102

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           +I  +GA  +A +LK N+ +T L L  N IG +GA AL+E+L+ +  + TL L    IG 
Sbjct: 103 SIGGQGAVVLAEMLKHNTALTWLSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGD 162

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  +A+ML++N T+  L+L  N + DEGA  LA+  K  N  L  ++L  N I   G 
Sbjct: 163 EGAVALAEMLKHNTTLEKLNLWDNSIGDEGAVALAKVLK-HNTTLEILNLTKNSITPVGG 221

Query: 546 FAIAQALKANEDVAVTSLNLANN 568
            A+  AL  N    +  LN+  N
Sbjct: 222 AALGAALDQNR--TLKKLNIERN 242



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 105/185 (56%), Gaps = 3/185 (1%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G  GA  +A+ALK N  +  + L  N+I  +GA A+A +LK N+ +T L L  N IG  
Sbjct: 48  LGVIGARAVAEALKDNTCLKRLYLHNNSIGPEGAVALAEMLKHNTALTWLSLGDNSIGGQ 107

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  L+E+LK +  +  L L    IG  GA  +A+ML +N T+  LDL  N + DEGA  
Sbjct: 108 GAVVLAEMLKHNTALTWLSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVA 167

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           LA+  K  N  L  ++L  N I D+GA A+A+ LK N  + +  LNL  N +T  G +AL
Sbjct: 168 LAEMLKH-NTTLEKLNLWDNSIGDEGAVALAKVLKHNTTLEI--LNLTKNSITPVGGAAL 224

Query: 579 TDAKD 583
             A D
Sbjct: 225 GAALD 229



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 127/268 (47%), Gaps = 30/268 (11%)

Query: 187 GYNQTAEEV-SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           G  +  EEV +  A      G+K     + +N     + L+   +G  G + + + L DN
Sbjct: 4   GEKRAREEVEALLAQTKLKDGVKNKIRAIANNTCGDNVGLNNARLGVIGARAVAEALKDN 63

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             ++RL L +  +  EGA A+AE+LK+N+ L  L L +N I   G   LAE L  N+ + 
Sbjct: 64  TCLKRLYLHNNSIGPEGAVALAEMLKHNTALTWLSLGDNSIGGQGAVVLAEMLKHNTALT 123

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L  N  G  GA ALA+ LE N +L  L L  NSIGDEG  AL               
Sbjct: 124 WLSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVAL--------------- 168

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
                         AE +K+  +L  +NL+ N IGDEGA  +A  LK N T+  ++L  N
Sbjct: 169 --------------AEMLKHNTTLEKLNLWDNSIGDEGAVALAKVLKHNTTLEILNLTKN 214

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYN 453
           +I   G +A+   L  N  +  L++  N
Sbjct: 215 SITPVGGAALGAALDQNRTLKKLNIERN 242



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 112/221 (50%), Gaps = 3/221 (1%)

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G +A    L+ N  LK L L  N IG EG   L ++L  N  +  L L    +  +GA  
Sbjct: 52  GARAVAEALKDNTCLKRLYLHNNSIGPEGAVALAEMLKHNTALTWLSLGDNSIGGQGAVV 111

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +AE+LK+N+ L  L L NN I   G  +LAE L  N+T+ +L L  N  G  GA ALA+ 
Sbjct: 112 LAEMLKHNTALTWLSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVALAEM 171

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N +L +L+L  NSIGDEG  AL   L      L +L++  NSI+  G   +   +  
Sbjct: 172 LKHNTTLEKLNLWDNSIGDEGAVALAKVL-KHNTTLEILNLTKNSITPVGGAALGAALDQ 230

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
            ++L  +N+  N      A     AL  +R + T D  G++
Sbjct: 231 NRTLKKLNIERNSTA--TARAFGAALPVDRELITGDWFGDD 269



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 91/169 (53%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G EG   LAE L +N     +S   N I   G      +L+ N AL  L+L  N IGD
Sbjct: 75  SIGPEGAVALAEMLKHNTALTWLSLGDNSIGGQGAVVLAEMLKHNTALTWLSLYNNSIGD 134

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           EG   L ++L  N  +E L L    + DEGA A+AE+LK+N+ L  L L +N I   G  
Sbjct: 135 EGAVALAEMLEHNTTLETLDLWDNSIGDEGAVALAEMLKHNTTLEKLNLWDNSIGDEGAV 194

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +LA+ L  N+T+  L+L  N    +G  AL   L+ N++L++L++  NS
Sbjct: 195 ALAKVLKHNTTLEILNLTKNSITPVGGAALGAALDQNRTLKKLNIERNS 243



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 104/196 (53%), Gaps = 1/196 (0%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +AE+L  N   + +    N I   G  A   +L+ N AL  L+L  N IG +G   L ++
Sbjct: 56  VAEALKDNTCLKRLYLHNNSIGPEGAVALAEMLKHNTALTWLSLGDNSIGGQGAVVLAEM 115

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  +  L L +  + DEGA A+AE+L++N+ L  L+L +N I   G  +LAE L  N
Sbjct: 116 LKHNTALTWLSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVALAEMLKHN 175

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           +T+  L+L  N  G  GA ALAK L+ N +L  L+L  NSI   G  AL + L   +  L
Sbjct: 176 TTLEKLNLWDNSIGDEGAVALAKVLKHNTTLEILNLTKNSITPVGGAALGAALDQNR-TL 234

Query: 362 AVLDIGNNSISAKGAF 377
             L+I  NS +   AF
Sbjct: 235 KKLNIERNSTATARAF 250



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 6/192 (3%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K   A + + +   + G +G   LAE L +N     +S   N I   G  A   +
Sbjct: 84  LAEMLKHNTALTWLSLGDNSIGGQGAVVLAEMLKHNTALTWLSLYNNSIGDEGAVALAEM 143

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L+TL+L  N IGDEG   L ++L  N  +E+L L    + DEGA A+A++LK+N
Sbjct: 144 LEHNTTLETLDLWDNSIGDEGAVALAEMLKHNTTLEKLNLWDNSIGDEGAVALAKVLKHN 203

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L +L L  N I   G  +L  AL +N T++ L++  N      A A    L  ++ L 
Sbjct: 204 TTLEILNLTKNSITPVGGAALGAALDQNRTLKKLNIERNSTAT--ARAFGAALPVDREL- 260

Query: 334 ELHLHGNSIGDE 345
              + G+  GD+
Sbjct: 261 ---ITGDWFGDD 269



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 53/115 (46%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           LS +   +  E    L E  +      ++D+   + GDEG   LAE L +N T E+++  
Sbjct: 125 LSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVALAEMLKHNTTLEKLNLW 184

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            N I   G  A   VL+ N  L+ LNL+ N I   G   L   L  N  +++L +
Sbjct: 185 DNSIGDEGAVALAKVLKHNTTLEILNLTKNSITPVGGAALGAALDQNRTLKKLNI 239


>gi|325187206|emb|CCA21746.1| phosphoacetylglucosamine mutase putative [Albugo laibachii Nc14]
          Length = 1285

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 147/288 (51%), Gaps = 22/288 (7%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           + L L G  +G+   K L  IL  N  +  L L    + D+GA  +A+ L+ N+ L  + 
Sbjct: 75  QVLKLGGYSLGNSSTKILSSILFKNQTLRTLDLGFNRINDKGANLLAKALEKNTSLERIY 134

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L+ N I  +G  + ++AL  NST+++LHL+GN  G  GA ALAKGL  N+ LR L++  N
Sbjct: 135 LSGNEIGLAGADAFSKALCTNSTLKTLHLSGNNIGEAGAQALAKGLRTNRCLRNLYIGTN 194

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK-SLLWINLYMNDI 399
            IG  G+  ++  L +    L  L +  N I  +G  H+AE  K  K  +  + +  NDI
Sbjct: 195 GIGSTGMLDIVRALENNT-VLQELTLSQNRIGNEGVRHLAEAFKRGKLHITTLEIGKNDI 253

Query: 400 GDEGAEKIADALKQNR---------TITTIDLGGNNIHSKGAS---AIARVLKDNSV--- 444
           G  GAE +ADAL+Q +         + + + +G  +   +G +   +I+   ++ S+   
Sbjct: 254 GSRGAELLADALQQVQIDAEGDSEGSTSEVLVGEQDDAREGNASEVSISNSCQEKSMEAR 313

Query: 445 -----ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
                + +L +  NPIG  GA+A  ++L  +  +  L L + Q+   G
Sbjct: 314 TNRNQLQNLYIDNNPIGDAGAQAFGKMLGKNHTLRVLDLSYTQMSLLG 361



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 20/279 (7%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           +  K    +L  N  L+TL+L  N I D+G   L   L  N  +ER+ LS  ++   GA 
Sbjct: 87  SSTKILSSILFKNQTLRTLDLGFNRINDKGANLLAKALEKNTSLERIYLSGNEIGLAGAD 146

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A ++ L  NS L+ L L+ N I  +G  +LA+ L  N  +R+L++  N  G+ G   + +
Sbjct: 147 AFSKALCTNSTLKTLHLSGNNIGEAGAQALAKGLRTNRCLRNLYIGTNGIGSTGMLDIVR 206

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            LE N  L+EL L  N IG+EG+R L       K  +  L+IG N I ++GA  +A+ ++
Sbjct: 207 ALENNTVLQELTLSQNRIGNEGVRHLAEAFKRGKLHITTLEIGKNDIGSRGAELLADALQ 266

Query: 385 NCK---------SLLWINLYMNDIGDEG-----------AEKIADALKQNRTITTIDLGG 424
             +         S   + +   D   EG            EK  +A      +  + +  
Sbjct: 267 QVQIDAEGDSEGSTSEVLVGEQDDAREGNASEVSISNSCQEKSMEARTNRNQLQNLYIDN 326

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           N I   GA A  ++L  N  +  LDL+Y  +   G + L
Sbjct: 327 NPIGDAGAQAFGKMLGKNHTLRVLDLSYTQMSLLGLREL 365



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 104/191 (54%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           VL +G  S+       ++  +   ++L  ++L  N I D+GA  +A AL++N ++  I L
Sbjct: 76  VLKLGGYSLGNSSTKILSSILFKNQTLRTLDLGFNRINDKGANLLAKALEKNTSLERIYL 135

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            GN I   GA A ++ L  NS + +L L+ N IG  GA+AL++ L+ +  +  L +G   
Sbjct: 136 SGNEIGLAGADAFSKALCTNSTLKTLHLSGNNIGEAGAQALAKGLRTNRCLRNLYIGTNG 195

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           IG++G   +   L  N  +  L L  N + +EG + LA++FK     +T++++  N+I  
Sbjct: 196 IGSTGMLDIVRALENNTVLQELTLSQNRIGNEGVRHLAEAFKRGKLHITTLEIGKNDIGS 255

Query: 543 DGAFAIAQALK 553
            GA  +A AL+
Sbjct: 256 RGAELLADALQ 266



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 57/327 (17%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +   ++D+      D+G   LA++L  N + E +  + N I  AG  AF   L +N  LK
Sbjct: 100 QTLRTLDLGFNRINDKGANLLAKALEKNTSLERIYLSGNEIGLAGADAFSKALCTNSTLK 159

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL+LSGN IG+ G + L   L  N  +  L + +  +   G   I   L+NN++L+ L L
Sbjct: 160 TLHLSGNNIGEAGAQALAKGLRTNRCLRNLYIGTNGIGSTGMLDIVRALENNTVLQELTL 219

Query: 282 NNNMIDYSGFTSLAEALLENS-TIRSLHLNGNYGGALGANALAKGL-------------- 326
           + N I   G   LAEA       I +L +  N  G+ GA  LA  L              
Sbjct: 220 SQNRIGNEGVRHLAEAFKRGKLHITTLEIGKNDIGSRGAELLADALQQVQIDAEGDSEGS 279

Query: 327 -------------EGNKS---------------------LRELHLHGNSIGDEGIRALMS 352
                        EGN S                     L+ L++  N IGD G +A   
Sbjct: 280 TSEVLVGEQDDAREGNASEVSISNSCQEKSMEARTNRNQLQNLYIDNNPIGDAGAQAFGK 339

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L  +   L VLD+    +S  G   +   I+  +SLL + L  +D       K A  L 
Sbjct: 340 MLG-KNHTLRVLDLSYTQMSLLGLRELCIGIRTSRSLLCLLLDGHDWSSTKYMKKAHPLL 398

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVL 439
           Q   + +       +HS    A+  VL
Sbjct: 399 QQSILLS-------VHSANQFAVKCVL 418


>gi|123479710|ref|XP_001323012.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121905868|gb|EAY10789.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 681

 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 199/404 (49%), Gaps = 26/404 (6%)

Query: 157 FAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           F  +L+A  +V   ++SG+  G   L  L++ L  NQ     +F  N I   GI +   +
Sbjct: 30  FCNQLKASFAVGVLNLSGQRIGINVLTKLSKLLRANQQITAFNFYGNLIRDHGIHSLLQL 89

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  +K L++  N   ++ V  + DI ++N  +  LQ+ +V +     K     L + 
Sbjct: 90  LMVNTRVKVLDIGCNDFTNQAVPTIVDI-INNTKITSLQIGTVGVAWHNNKFTIPALSD- 147

Query: 274 SILRVLELNNNMIDYSGFT-----------------SLAEALLENSTIRSLHLNGNYGGA 316
            I+R ++  +N I+  G +                  LA  + E+ST++SL +  N    
Sbjct: 148 -IVRAVQ-GSNRIECLGLSGLCMSFRVGARKISMDADLAHFIEESSTLKSLSIAENGFAP 205

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                +  GL  N++L+ L +H + + D      +S ++ R  +L+ LD+    +S    
Sbjct: 206 KEQEVVLNGLLQNENLKFLDMHISPLPDPFGGNFLSQIN-RMSRLSYLDLHKCQLSENAG 264

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             +AE +K   SL+ +++  N+IGD G   I+ AL +N T++ +++G NNI  + A  I+
Sbjct: 265 ASLAESLKYNTSLIVLDISENEIGDLGFMAISQALLENYTLSELNVGNNNITEQSADHIS 324

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            ++  N+++++LDL+ N IG  GA A++  +  + ++  L +  C+I  + A  +A  L+
Sbjct: 325 ELILKNNILSNLDLSKNGIGDVGAHAIAASITNNESLTKLNISSCRISDNYAVEIAIALK 384

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            N  + +L L  N L  E    + +  +  NE + +ID++  +I
Sbjct: 385 DNKALRVLKLSDNFLTRECGYSILEEIR-ANEVIFTIDVSATQI 427



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 181/379 (47%), Gaps = 19/379 (5%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           K F   L+++ A+  LNLSG  IG   +  L  +L  N  +         +RD G  ++ 
Sbjct: 28  KRFCNQLKASFAVGVLNLSGQRIGINVLTKLSKLLRANQQITAFNFYGNLIRDHGIHSLL 87

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA------ 321
           +LL  N+ ++VL++  N        ++ + ++ N+ I SL + G  G A   N       
Sbjct: 88  QLLMVNTRVKVLDIGCNDFTNQAVPTIVD-IINNTKITSLQI-GTVGVAWHNNKFTIPAL 145

Query: 322 --LAKGLEGNKSLRELHLHG----NSIGDEGIR--ALMSGLSSRKGKLAVLDIGNNSISA 373
             + + ++G+  +  L L G      +G   I   A ++        L  L I  N  + 
Sbjct: 146 SDIVRAVQGSNRIECLGLSGLCMSFRVGARKISMDADLAHFIEESSTLKSLSIAENGFAP 205

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           K    V   +   ++L +++++++ + D         + +   ++ +DL    +     +
Sbjct: 206 KEQEVVLNGLLQNENLKFLDMHISPLPDPFGGNFLSQINRMSRLSYLDLHKCQLSENAGA 265

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           ++A  LK N+ +  LD++ N IG  G  A+S+ L  +  ++ L +G   I    A+ +++
Sbjct: 266 SLAESLKYNTSLIVLDISENEIGDLGFMAISQALLENYTLSELNVGNNNITEQSADHISE 325

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
           ++  NN +S LDL  NG+ D GA  +A S    NE+LT ++++   I D+ A  IA ALK
Sbjct: 326 LILKNNILSNLDLSKNGIGDVGAHAIAASI-TNNESLTKLNISSCRISDNYAVEIAIALK 384

Query: 554 ANEDVAVTSLNLANNFLTK 572
            N+  A+  L L++NFLT+
Sbjct: 385 DNK--ALRVLKLSDNFLTR 401



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 1/173 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S    GD G   ++++L  N T  E++   N IT         ++  N  L  L+LS
Sbjct: 280 LDISENEIGDLGFMAISQALLENYTLSELNVGNNNITEQSADHISELILKNNILSNLDLS 339

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD G   +   + +N  + +L +SS  + D  A  IA  LK+N  LRVL+L++N +
Sbjct: 340 KNGIGDVGAHAIAASITNNESLTKLNISSCRISDNYAVEIAIALKDNKALRVLKLSDNFL 399

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL-RELHLH 338
                 S+ E +  N  I ++ ++          A+    + NK + RE++L 
Sbjct: 400 TRECGYSILEEIRANEVIFTIDVSATQIDHFVQQAINTLCQRNKQIQREVNLQ 452



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 131/288 (45%), Gaps = 27/288 (9%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L+L+G   G      L+K L  N+ +   + +GN I D GI +L+  L     ++ VLDI
Sbjct: 43  LNLSGQRIGINVLTKLSKLLRANQQITAFNFYGNLIRDHGIHSLLQLLMVN-TRVKVLDI 101

Query: 367 GNNSISAKGAFHVAEYIKNCK---------SLLWINLYMNDIGDEGAEKIADALKQNRTI 417
           G N  + +    + + I N K          + W N   N         I  A++ +  I
Sbjct: 102 GCNDFTNQAVPTIVDIINNTKITSLQIGTVGVAWHN---NKFTIPALSDIVRAVQGSNRI 158

Query: 418 TTIDLGGNNIHSK-GASAI------ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
             + L G  +  + GA  I      A  ++++S + SL +A N       + +   L  +
Sbjct: 159 ECLGLSGLCMSFRVGARKISMDADLAHFIEESSTLKSLSIAENGFAPKEQEVVLNGLLQN 218

Query: 471 GNINTLKLGWCQIGAS-GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
            N+  L +    +    G  F++ + R +  +S LDL    L +     LA+S K  N +
Sbjct: 219 ENLKFLDMHISPLPDPFGGNFLSQINRMSR-LSYLDLHKCQLSENAGASLAESLK-YNTS 276

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 577
           L  +D++ NEI D G  AI+QAL   E+  ++ LN+ NN +T+  QSA
Sbjct: 277 LIVLDISENEIGDLGFMAISQALL--ENYTLSELNVGNNNITE--QSA 320


>gi|290991306|ref|XP_002678276.1| predicted protein [Naegleria gruberi]
 gi|284091888|gb|EFC45532.1| predicted protein [Naegleria gruberi]
          Length = 445

 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 176/331 (53%), Gaps = 46/331 (13%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L +L++ GN IGDEG+K + ++      +  L +S   + D+G K I+++ +    L  L
Sbjct: 127 LTSLDIGGNQIGDEGIKLISEM----KQLTLLDISGNSIGDKGVKPISKMKQ----LTSL 178

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            + NN I  +G    ++ ++E   + SL ++ N  G  GA ++++     K L  L + G
Sbjct: 179 NIYNNEIGVAG----SKFIIEMKQLTSLDISYNEIGDEGAKSISEL----KQLTSLTVSG 230

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEGI+     L S   +L +LDI  NSI  KG   +++     K L  +N+Y N+I
Sbjct: 231 NQIGDEGIK-----LISEMKQLTLLDISGNSIGDKGVKPISK----MKQLTSLNIYNNEI 281

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G  G++ I +     + +T++D+  N I  +GA +I+ + +    +TSL ++ N IG +G
Sbjct: 282 GVAGSKFIIEM----KQLTSLDISYNEIGDEGAKSISEMKQ----LTSLTISGNQIGDEG 333

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
            K +SE+      +  L +    +G  G + ++ M +  +    L +  N +   GAK +
Sbjct: 334 IKLISEM----KQLTLLDISGKSVGDKGVKSISKMKQLTS----LTIYTNEIGVAGAKFI 385

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           ++      + LTS+D+++NEI D+GA +I++
Sbjct: 386 SEM-----KQLTSLDISYNEIGDEGAKSISE 411



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 169/360 (46%), Gaps = 71/360 (19%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E++  +S+D+ G   GDEG+  ++E     +    +  + N I   G+K    + Q    
Sbjct: 123 EMKRLTSLDIGGNQIGDEGIKLISEM----KQLTLLDISGNSIGDKGVKPISKMKQ---- 174

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNS 274
           L +LN+  N IG  G K +         +E  QL+S+D+      DEGAK+I+EL +   
Sbjct: 175 LTSLNIYNNEIGVAGSKFI---------IEMKQLTSLDISYNEIGDEGAKSISELKQ--- 222

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L ++ N I   G   ++E       +  L ++GN  G  G   ++K     K L  
Sbjct: 223 -LTSLTVSGNQIGDEGIKLISEM----KQLTLLDISGNSIGDKGVKPISK----MKQLTS 273

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L+++ N IG  G + ++        +L  LDI  N I  +GA  ++E     K L  + +
Sbjct: 274 LNIYNNEIGVAGSKFII-----EMKQLTSLDISYNEIGDEGAKSISE----MKQLTSLTI 324

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV---------- 444
             N IGDEG + I++     + +T +D+ G ++  KG  +I+++ +  S+          
Sbjct: 325 SGNQIGDEGIKLISEM----KQLTLLDISGKSVGDKGVKSISKMKQLTSLTIYTNEIGVA 380

Query: 445 ----------ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
                     +TSLD++YN IG +GAK++SE+      +  L +    IG  G++F+  M
Sbjct: 381 GAKFISEMKQLTSLDISYNEIGDEGAKSISEL----KQLTLLDISGNGIGDEGSKFIIGM 436



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 141/274 (51%), Gaps = 50/274 (18%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K L  L++  N I DE  ++++        +L  LDIG N I  +G   ++E     K L
Sbjct: 101 KQLTSLNISNNQINDETAKSII-----EMKRLTSLDIGGNQIGDEGIKLISE----MKQL 151

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             +++  N IGD+G + I+  +KQ   +T++++  N I   G+  I  + +    +TSLD
Sbjct: 152 TLLDISGNSIGDKGVKPIS-KMKQ---LTSLNIYNNEIGVAGSKFIIEMKQ----LTSLD 203

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           ++YN IG +GAK++SE+      + +L +   QIG  G + +++M      +++LD+  N
Sbjct: 204 ISYNEIGDEGAKSISEL----KQLTSLTVSGNQIGDEGIKLISEM----KQLTLLDISGN 255

Query: 510 GLRDEGAKCLAQ-------------------SFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
            + D+G K +++                    F +  + LTS+D+++NEI D+GA +I++
Sbjct: 256 SIGDKGVKPISKMKQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISE 315

Query: 551 ALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
             +      +TSL ++ N +   G   +++ K L
Sbjct: 316 MKQ------LTSLTISGNQIGDEGIKLISEMKQL 343



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 51/204 (25%)

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           ++I   K L  +N+  N I DE A+ I +     + +T++D+GGN I  +G   I+ + +
Sbjct: 95  KFISEMKQLTSLNISNNQINDETAKSIIEM----KRLTSLDIGGNQIGDEGIKLISEMKQ 150

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
               +T LD++ N IG  G K +S++      + +L +   +IG +G++F+ +M      
Sbjct: 151 ----LTLLDISGNSIGDKGVKPISKM----KQLTSLNIYNNEIGVAGSKFIIEM------ 196

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
                                      + LTS+D+++NEI D+GA +I++ LK      +
Sbjct: 197 ---------------------------KQLTSLDISYNEIGDEGAKSISE-LK-----QL 223

Query: 561 TSLNLANNFLTKFGQSALTDAKDL 584
           TSL ++ N +   G   +++ K L
Sbjct: 224 TSLTVSGNQIGDEGIKLISEMKQL 247


>gi|301112693|ref|XP_002998117.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112411|gb|EEY70463.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 678

 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 11/319 (3%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           LA+ +  + T   +    N +   G +A    L S+ AL  LNLS   +GD+GV    D 
Sbjct: 333 LADGVRNHSTLHTIELENNPLGPIGGQALAECLASSSALTYLNLSWTQLGDDGVVGFRDA 392

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L+ N  +ERL L   DLR  G  AIAE L+  + LR L L  N +  +G  +LA AL  +
Sbjct: 393 LIRNKSIERLDLRGNDLRVRGVVAIAEGLRCTATLRELHLRWNTVSPAGAEALAGALEVS 452

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALM 351
            ++  L +  +  G+ GA A A  LE NK L  L++ G            IG E  + + 
Sbjct: 453 KSLVLLDIEHHTMGSRGATAFASMLERNKRLEHLNIGGTDSDDALDAGLGIGSEQAQRIA 512

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L++    L +L IG N I+A       E +K  K+L+ ++L  + +    A +    L
Sbjct: 513 EVLTNSNRSLRILHIGANRINADAVARFGELLKFNKTLVALDLSYSGLDAAKAPRFFACL 572

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
             N T+  +DL  N I ++G  A  R L+ N  +  L+LAYN +  +    L+  L    
Sbjct: 573 SANNTLRRLDLAHNRIGNEGLVACTRALETNRTLRELNLAYNNMTEEPLAVLAAKLHAPK 632

Query: 472 NINTLKLGW-CQIGASGAE 489
            + TL L W C  G +  E
Sbjct: 633 RLITLTLEWLCLTGNNMTE 651



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 168/384 (43%), Gaps = 40/384 (10%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K+ R   +V++ GR        FL + + ++     V+  +  I +A  +A    ++++ 
Sbjct: 282 KDHRDLVTVNLCGRQLELYEAGFLGKKMLHHLHLGRVTLNSCMIDSAAARALADGVRNHS 341

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L T+ L  NP+G  G + L + L  ++ +  L LS   L D+G                
Sbjct: 342 TLHTIELENNPLGPIGGQALAECLASSSALTYLNLSWTQLGDDGV--------------- 386

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
                      GF    +AL+ N +I  L L GN     G  A+A+GL    +LRELHL 
Sbjct: 387 ----------VGFR---DALIRNKSIERLDLRGNDLRVRGVVAIAEGLRCTATLRELHLR 433

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N++   G  AL   L   K  L +LDI ++++ ++GA   A  ++  K L  +N+   D
Sbjct: 434 WNTVSPAGAEALAGALEVSKS-LVLLDIEHHTMGSRGATAFASMLERNKRLEHLNIGGTD 492

Query: 399 ----------IGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
                     IG E A++IA+ L   NR++  + +G N I++   +    +LK N  + +
Sbjct: 493 SDDALDAGLGIGSEQAQRIAEVLTNSNRSLRILHIGANRINADAVARFGELLKFNKTLVA 552

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           LDL+Y+ + A  A      L  +  +  L L   +IG  G       L  N T+  L+L 
Sbjct: 553 LDLSYSGLDAAKAPRFFACLSANNTLRRLDLAHNRIGNEGLVACTRALETNRTLRELNLA 612

Query: 508 ANGLRDEGAKCLAQSFKVVNEALT 531
            N + +E    LA         +T
Sbjct: 613 YNNMTEEPLAVLAAKLHAPKRLIT 636



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 133/324 (41%), Gaps = 84/324 (25%)

Query: 325 GLEGNKSLRELHL-----HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           G  G K L  LHL     +   I     RAL  G+ +    L  +++ NN +   G   +
Sbjct: 303 GFLGKKMLHHLHLGRVTLNSCMIDSAAARALADGVRN-HSTLHTIELENNPLGPIGGQAL 361

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE + +  +L ++NL    +GD+G     DAL +N++I  +DL GN++  +G  AIA  L
Sbjct: 362 AECLASSSALTYLNLSWTQLGDDGVVGFRDALIRNKSIERLDLRGNDLRVRGVVAIAEGL 421

Query: 440 KDNSVITSLDLAYNPI----------------------------GADGAKALSEVLKFHG 471
           +  + +  L L +N +                            G+ GA A + +L+ + 
Sbjct: 422 RCTATLRELHLRWNTVSPAGAEALAGALEVSKSLVLLDIEHHTMGSRGATAFASMLERNK 481

Query: 472 NINTLKLGWCQ----------IGASGAEFVA----------------------------- 492
            +  L +G             IG+  A+ +A                             
Sbjct: 482 RLEHLNIGGTDSDDALDAGLGIGSEQAQRIAEVLTNSNRSLRILHIGANRINADAVARFG 541

Query: 493 DMLRYNNTISILDLRANGLRDEGAK----CLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           ++L++N T+  LDL  +GL    A     CL+      N  L  +DLA N I ++G  A 
Sbjct: 542 ELLKFNKTLVALDLSYSGLDAAKAPRFFACLS-----ANNTLRRLDLAHNRIGNEGLVAC 596

Query: 549 AQALKANEDVAVTSLNLANNFLTK 572
            +AL+ N    +  LNLA N +T+
Sbjct: 597 TRALETNR--TLRELNLAYNNMTE 618



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 186/426 (43%), Gaps = 53/426 (12%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           L  +L  N+T     F+ N +    +      L+ N AL+ L + G  +  +G + L ++
Sbjct: 20  LGRALRENETLTRCDFSWNQMGPQAVLGLLSALRDNFALRELCVYGRDVAQDGTQYLLNL 79

Query: 242 LVDNA-----GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
             D+A      +  L  S    R  G +A+  + K  +   +  +N  +++  G   +A 
Sbjct: 80  DFDSAKRIVVALRHLNDSFALARLSGVRAVLPIAKVKTSRWITLVNRELVELDGLV-IAG 138

Query: 297 ALLENSTIRSLHLNGNYG-GALGANALAKGLEGNKSLRELHLH--------GNSIGDEGI 347
            + +N+ + SL ++ N G G +    L   ++G  +LRE++L         G SIG+  +
Sbjct: 139 VVPQNNMLLSLDMHDNPGLGRVAVLELLTAIKGCITLREINLSDTGLFPEAGESIGE--L 196

Query: 348 RALMSGLSSRKGKLAVLDI----GNN---SISAKGAFHVAEYIKNCKSLL--WI---NLY 395
            AL S L + K    V+++    GN     I  K  F V     + K  L  WI      
Sbjct: 197 VALNSTLLTIKMHETVINVQQVRGNRKYGEIPEKFEFSV-----DSKHFLDRWILAKCFA 251

Query: 396 MNDIGDEGAE-KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           +N    E  E ++ D  +  +T+  +D      H           KD+  + +++L    
Sbjct: 252 VNRFTQELNELRLPDVSRSVKTLVNMD----TTH-----------KDHRDLVTVNLCGRQ 296

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +    A  L + +  H ++  + L  C I ++ A  +AD +R ++T+  ++L  N L   
Sbjct: 297 LELYEAGFLGKKMLHHLHLGRVTLNSCMIDSAAARALADGVRNHSTLHTIELENNPLGPI 356

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           G + LA+     + ALT ++L++ ++ DDG      AL  N+  ++  L+L  N L   G
Sbjct: 357 GGQALAECL-ASSSALTYLNLSWTQLGDDGVVGFRDALIRNK--SIERLDLRGNDLRVRG 413

Query: 575 QSALTD 580
             A+ +
Sbjct: 414 VVAIAE 419



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 3/150 (2%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L +N +   G   L  AL EN T+     + N  G      L   L  N +LREL ++
Sbjct: 5   LNLRDNRLSAQGADELGRALRENETLTRCDFSWNQMGPQAVLGLLSALRDNFALRELCVY 64

Query: 339 GNSIGDEGIRALMS-GLSSRKGKLAVLDIGNNS--ISAKGAFHVAEYIKNCKSLLWINLY 395
           G  +  +G + L++    S K  +  L   N+S  ++          I   K+  WI L 
Sbjct: 65  GRDVAQDGTQYLLNLDFDSAKRIVVALRHLNDSFALARLSGVRAVLPIAKVKTSRWITLV 124

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGN 425
             ++ +     IA  + QN  + ++D+  N
Sbjct: 125 NRELVELDGLVIAGVVPQNNMLLSLDMHDN 154


>gi|320169363|gb|EFW46262.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 350

 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 106/186 (56%), Gaps = 6/186 (3%)

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L+    G   A+ IA+AL  N T T + L  N I   GA AIA  LK N+ +T L L+ 
Sbjct: 3   SLFSRQTGSAEAQAIAEALSLNTTATLLKLSCNQIDDAGARAIAETLKVNTRLTELHLSS 62

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N I   G +A++E LK +  +  L L   QIG +GA+ +A+ LR N T++ L L  N + 
Sbjct: 63  NRIRDTGTQAIAETLKVNKTLTYLNLESNQIGHAGAQAIAEALRVNKTLTRLGLELNQIG 122

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN-----LAN 567
           D GA+ LA++   VN  LT + L++N+I D GA AIA+ALK  + +   SL+     LA 
Sbjct: 123 DAGAQALAEALH-VNSTLTDLTLSYNQIGDAGAQAIAEALKVTQTMTTLSLDDQINPLAL 181

Query: 568 NFLTKF 573
           + L +F
Sbjct: 182 SLLPRF 187



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 88/157 (56%), Gaps = 1/157 (0%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +    +   + L  N I D GA  IA+ LK N  +T + L  N I   G  AIA  
Sbjct: 17  IAEALSLNTTATLLKLSCNQIDDAGARAIAETLKVNTRLTELHLSSNRIRDTGTQAIAET 76

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK N  +T L+L  N IG  GA+A++E L+ +  +  L L   QIG +GA+ +A+ L  N
Sbjct: 77  LKVNKTLTYLNLESNQIGHAGAQAIAEALRVNKTLTRLGLELNQIGDAGAQALAEALHVN 136

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
           +T++ L L  N + D GA+ +A++ KV  + +T++ L
Sbjct: 137 STLTDLTLSYNQIGDAGAQAIAEALKVT-QTMTTLSL 172



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 81/144 (56%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           +L +  N I   GA  +AE +K    L  ++L  N I D G + IA+ LK N+T+T ++L
Sbjct: 29  LLKLSCNQIDDAGARAIAETLKVNTRLTELHLSSNRIRDTGTQAIAETLKVNKTLTYLNL 88

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I   GA AIA  L+ N  +T L L  N IG  GA+AL+E L  +  +  L L + Q
Sbjct: 89  ESNQIGHAGAQAIAEALRVNKTLTRLGLELNQIGDAGAQALAEALHVNSTLTDLTLSYNQ 148

Query: 483 IGASGAEFVADMLRYNNTISILDL 506
           IG +GA+ +A+ L+   T++ L L
Sbjct: 149 IGDAGAQAIAEALKVTQTMTTLSL 172



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 79/151 (52%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           +A  +A    L  N     L LS N I D G + + + L  N  +  L LSS  +RD G 
Sbjct: 11  SAEAQAIAEALSLNTTATLLKLSCNQIDDAGARAIAETLKVNTRLTELHLSSNRIRDTGT 70

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +AIAE LK N  L  L L +N I ++G  ++AEAL  N T+  L L  N  G  GA ALA
Sbjct: 71  QAIAETLKVNKTLTYLNLESNQIGHAGAQAIAEALRVNKTLTRLGLELNQIGDAGAQALA 130

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           + L  N +L +L L  N IGD G +A+   L
Sbjct: 131 EALHVNSTLTDLTLSYNQIGDAGAQAIAEAL 161



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 93/192 (48%), Gaps = 29/192 (15%)

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           G    + + + L  N     L+LS   + D GA+AIAE LK N+ L  L L++N I  +G
Sbjct: 10  GSAEAQAIAEALSLNTTATLLKLSCNQIDDAGARAIAETLKVNTRLTELHLSSNRIRDTG 69

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             ++AE L  N T+  L+L  N  G  GA A+A+ L  NK+L  L L  N IGD G +AL
Sbjct: 70  TQAIAETLKVNKTLTYLNLESNQIGHAGAQAIAEALRVNKTLTRLGLELNQIGDAGAQAL 129

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
                                    A HV   + +      + L  N IGD GA+ IA+A
Sbjct: 130 AE-----------------------ALHVNSTLTD------LTLSYNQIGDAGAQAIAEA 160

Query: 411 LKQNRTITTIDL 422
           LK  +T+TT+ L
Sbjct: 161 LKVTQTMTTLSL 172



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 85/167 (50%)

Query: 171 GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPI 230
            R  G      +AE+L  N TA  +  + N I  AG +A    L+ N  L  L+LS N I
Sbjct: 6   SRQTGSAEAQAIAEALSLNTTATLLKLSCNQIDDAGARAIAETLKVNTRLTELHLSSNRI 65

Query: 231 GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
            D G + + + L  N  +  L L S  +   GA+AIAE L+ N  L  L L  N I  +G
Sbjct: 66  RDTGTQAIAETLKVNKTLTYLNLESNQIGHAGAQAIAEALRVNKTLTRLGLELNQIGDAG 125

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             +LAEAL  NST+  L L+ N  G  GA A+A+ L+  +++  L L
Sbjct: 126 AQALAEALHVNSTLTDLTLSYNQIGDAGAQAIAEALKVTQTMTTLSL 172



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 71/142 (50%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G   +AE+L  N    E+  ++N I   G +A    L+ N  L  LNL  N
Sbjct: 32  LSCNQIDDAGARAIAETLKVNTRLTELHLSSNRIRDTGTQAIAETLKVNKTLTYLNLESN 91

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG  G + + + L  N  + RL L    + D GA+A+AE L  NS L  L L+ N I  
Sbjct: 92  QIGHAGAQAIAEALRVNKTLTRLGLELNQIGDAGAQALAEALHVNSTLTDLTLSYNQIGD 151

Query: 289 SGFTSLAEALLENSTIRSLHLN 310
           +G  ++AEAL    T+ +L L+
Sbjct: 152 AGAQAIAEALKVTQTMTTLSLD 173



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 61/122 (50%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + +S     D G   +AE+L  N+T   ++  +N I  AG +A    L+ N  L  L
Sbjct: 55  LTELHLSSNRIRDTGTQAIAETLKVNKTLTYLNLESNQIGHAGAQAIAEALRVNKTLTRL 114

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N IGD G + L + L  N+ +  L LS   + D GA+AIAE LK    +  L L++
Sbjct: 115 GLELNQIGDAGAQALAEALHVNSTLTDLTLSYNQIGDAGAQAIAEALKVTQTMTTLSLDD 174

Query: 284 NM 285
            +
Sbjct: 175 QI 176


>gi|320169287|gb|EFW46186.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 439

 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 89/237 (37%), Positives = 125/237 (52%), Gaps = 6/237 (2%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K  +L    IGD G + + + L  NA + RL L    + D GA+AIAE L  N+ L  L 
Sbjct: 27  KWFDLIHRRIGDAGAQVIAEELKRNATLARLGLIESQIGDAGARAIAEALTVNTTLITLS 86

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N I  +G  ++AEAL  N T+ +L L  N  G  G  A+A+ L+ + +L  L L  N
Sbjct: 87  LEKNPIGDAGTKAIAEALKVNLTLATLLLGENQIGDAGVQAIAETLKVSTTLTRLQLQKN 146

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD G +A+ + L      L  L++G N I   GA  +AE +K  K+L W++L  N IG
Sbjct: 147 QIGDAGAQAIAAALRVNT-SLTELNLGLNQIGDVGAQAIAEALKVNKTLAWLDLGQNLIG 205

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI--ARVLKDNSVITSLDLAYNPI 455
           D GA+ IA+ L++N T+T +    N I   GA AI  AR         S+D   NP+
Sbjct: 206 DAGAKAIAEGLRENTTVTRLQ---NRIGYDGAQAIDDARNATKALTYCSIDNQINPL 259



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 133/258 (51%), Gaps = 5/258 (1%)

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           E N   +   L    IGD G + +   L  R   LA L +  + I   GA  +AE +   
Sbjct: 21  EMNSEGKWFDLIHRRIGDAGAQVIAEELK-RNATLARLGLIESQIGDAGARAIAEALTVN 79

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
            +L+ ++L  N IGD G + IA+ALK N T+ T+ LG N I   G  AIA  LK ++ +T
Sbjct: 80  TTLITLSLEKNPIGDAGTKAIAEALKVNLTLATLLLGENQIGDAGVQAIAETLKVSTTLT 139

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            L L  N IG  GA+A++  L+ + ++  L LG  QIG  GA+ +A+ L+ N T++ LDL
Sbjct: 140 RLQLQKNQIGDAGAQAIAAALRVNTSLTELNLGLNQIGDVGAQAIAEALKVNKTLAWLDL 199

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
             N + D GAK +A+  +  N  +T +    N I  DGA AI  A  A + +   S++  
Sbjct: 200 GQNLIGDAGAKAIAEGLR-ENTTVTRLQ---NRIGYDGAQAIDDARNATKALTYCSIDNQ 255

Query: 567 NNFLTKFGQSALTDAKDL 584
            N L       L  AKDL
Sbjct: 256 INPLAFSLLPRLATAKDL 273



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 117/221 (52%), Gaps = 4/221 (1%)

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           NS  +  +L +  I  +G   +AE L  N+T+  L L  +  G  GA A+A+ L  N +L
Sbjct: 23  NSEGKWFDLIHRRIGDAGAQVIAEELKRNATLARLGLIESQIGDAGARAIAEALTVNTTL 82

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L L  N IGD G +A+   L      LA L +G N I   G   +AE +K   +L  +
Sbjct: 83  ITLSLEKNPIGDAGTKAIAEALKVNL-TLATLLLGENQIGDAGVQAIAETLKVSTTLTRL 141

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L  N IGD GA+ IA AL+ N ++T ++LG N I   GA AIA  LK N  +  LDL  
Sbjct: 142 QLQKNQIGDAGAQAIAAALRVNTSLTELNLGLNQIGDVGAQAIAEALKVNKTLAWLDLGQ 201

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           N IG  GAKA++E L+ +  +  L+    +IG  GA+ + D
Sbjct: 202 NLIGDAGAKAIAEGLRENTTVTRLQ---NRIGYDGAQAIDD 239



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 99/187 (52%)

Query: 168 DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           D+  R  GD G   +AE L  N T   +    + I  AG +A    L  N  L TL+L  
Sbjct: 30  DLIHRRIGDAGAQVIAEELKRNATLARLGLIESQIGDAGARAIAEALTVNTTLITLSLEK 89

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           NPIGD G K + + L  N  +  L L    + D G +AIAE LK ++ L  L+L  N I 
Sbjct: 90  NPIGDAGTKAIAEALKVNLTLATLLLGENQIGDAGVQAIAETLKVSTTLTRLQLQKNQIG 149

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
            +G  ++A AL  N+++  L+L  N  G +GA A+A+ L+ NK+L  L L  N IGD G 
Sbjct: 150 DAGAQAIAAALRVNTSLTELNLGLNQIGDVGAQAIAEALKVNKTLAWLDLGQNLIGDAGA 209

Query: 348 RALMSGL 354
           +A+  GL
Sbjct: 210 KAIAEGL 216



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 100/199 (50%), Gaps = 3/199 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + + +     GD G   +AE+L  N T   +S   N I  AG KA  
Sbjct: 42  QVIAEELKRNATLARLGLIESQIGDAGARAIAEALTVNTTLITLSLEKNPIGDAGTKAIA 101

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N+ L TL L  N IGD GV+ + + L  +  + RLQL    + D GA+AIA  L+
Sbjct: 102 EALKVNLTLATLLLGENQIGDAGVQAIAETLKVSTTLTRLQLQKNQIGDAGAQAIAAALR 161

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L  L L  N I   G  ++AEAL  N T+  L L  N  G  GA A+A+GL  N +
Sbjct: 162 VNTSLTELNLGLNQIGDVGAQAIAEALKVNKTLAWLDLGQNLIGDAGAKAIAEGLRENTT 221

Query: 332 LRELHLHGNSIGDEGIRAL 350
           +  L    N IG +G +A+
Sbjct: 222 VTRLQ---NRIGYDGAQAI 237


>gi|6626184|gb|AAF19528.1|AF215731_1 Ran GTPase activating protein [Medicago sativa subsp. x varia]
          Length = 533

 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 181/394 (45%), Gaps = 41/394 (10%)

Query: 152 QTLNEFAKEL---RAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVS---FAANGITA 204
           Q  +E  K L    +F+ +  S R+FG +    +   L       +EV    F A    A
Sbjct: 139 QEASELLKPLMGPNSFTKICFSNRSFGLDAAHVVEPMLISIKDQLKEVDLSDFIAGRPEA 198

Query: 205 AGIKA---FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
             I+    F   L+  + L+ LNLS N +G++GV+    +L     +E L L +  + +E
Sbjct: 199 EAIEVMNIFSSALERAV-LRYLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEE 257

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
            AKA+AEL+ +   L+VL  +NNM    G  ++AE +  +  +     +    G+ G  A
Sbjct: 258 AAKAVAELIPSTEKLKVLHFHNNMTGDEGAFAIAEVVKRSPALEDFRCSSTRVGSEGGVA 317

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           LA+ L     L++L L  N  G E   AL                             ++
Sbjct: 318 LAEALGACTHLKKLDLRDNMFGVEAGVAL-----------------------------SK 348

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLK 440
            I     L  I L   ++ D+GAE +A+ALK++  ++ T+D+ GN+I +K   ++A  + 
Sbjct: 349 VIPVFADLTEIYLSYLNLEDDGAEALANALKESAPSLETLDMAGNDITAKATVSVAECIS 408

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
               +T L+L+ N +  +GA  +S+ L+  G ++ + L    I  SGA+ +A+ +     
Sbjct: 409 SKQFLTKLNLSENELKDEGAGLISKALEGRGQLSEVDLSTNLITWSGAKLLAEAVVQKPG 468

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
             +L++ AN + DEG   L   FK   + L  +D
Sbjct: 469 FKLLNINANFISDEGIDELKDIFKNSPDMLGPLD 502



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 31/259 (11%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           LR L+L  N++G++G+RA  + L S+   L  L + N+ IS + A  VAE I + + L  
Sbjct: 216 LRYLNLSNNAMGEKGVRAFRALLKSQ-NDLEELYLMNDGISEEAAKAVAELIPSTEKLKV 274

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++ + N  GDEGA                             AIA V+K +  +     +
Sbjct: 275 LHFHNNMTGDEGA----------------------------FAIAEVVKRSPALEDFRCS 306

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
              +G++G  AL+E L    ++  L L     G      ++ ++     ++ + L    L
Sbjct: 307 STRVGSEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNL 366

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            D+GA+ LA + K    +L ++D+A N+I      ++A+ + + +   +T LNL+ N L 
Sbjct: 367 EDDGAEALANALKESAPSLETLDMAGNDITAKATVSVAECISSKQ--FLTKLNLSENELK 424

Query: 572 KFGQSALTDAKDLVYEMSE 590
             G   ++ A +   ++SE
Sbjct: 425 DEGAGLISKALEGRGQLSE 443


>gi|46447245|ref|YP_008610.1| hypothetical protein pc1611 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46400886|emb|CAF24335.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1594

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 118/230 (51%), Gaps = 1/230 (0%)

Query: 238  LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
            L  + ++++ +  L LS   + D+ A+ IA  L  N+ L  L LNNN I   G  +LA A
Sbjct: 1348 LFQLYMNDSRLTSLDLSYRGISDKEAEVIANGLTFNTALSFLRLNNNQISDRGVEALARA 1407

Query: 298  LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            L  N+TI+ L L  N     GA AL + L  N +L  L L  N I ++G+ A    L+S 
Sbjct: 1408 LTFNTTIKQLWLESNQISDRGAEALTRVLASNTALMTLSLRENLISNKGVEAFAQALASN 1467

Query: 358  KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
               L  L +  N IS KG   +A  +    +L  ++L  N I D G E +A AL  N  +
Sbjct: 1468 TA-LRKLYLNGNQISDKGMETLARALTPNTTLESLDLDRNQISDRGVEALAIALVSNTAL 1526

Query: 418  TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
             TI L  N I  KG  A+AR L  N+ +T+L L  N I   G KAL++VL
Sbjct: 1527 RTIYLNRNLISDKGMEALARALASNTALTTLSLNGNLISDKGMKALAKVL 1576



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 108/194 (55%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A S + ++     D G+  LA +L +N T +++   +N I+  G +A   VL SN AL T
Sbjct: 1385 ALSFLRLNNNQISDRGVEALARALTFNTTIKQLWLESNQISDRGAEALTRVLASNTALMT 1444

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L+L  N I ++GV+     L  N  + +L L+   + D+G + +A  L  N+ L  L+L+
Sbjct: 1445 LSLRENLISNKGVEAFAQALASNTALRKLYLNGNQISDKGMETLARALTPNTTLESLDLD 1504

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
             N I   G  +LA AL+ N+ +R+++LN N     G  ALA+ L  N +L  L L+GN I
Sbjct: 1505 RNQISDRGVEALAIALVSNTALRTIYLNRNLISDKGMEALARALASNTALTTLSLNGNLI 1564

Query: 343  GDEGIRALMSGLSS 356
             D+G++AL   L+S
Sbjct: 1565 SDKGMKALAKVLAS 1578



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 119/226 (52%), Gaps = 1/226 (0%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            L +L+LS   I D+  + + + L  N  +  L+L++  + D G +A+A  L  N+ ++ L
Sbjct: 1358 LTSLDLSYRGISDKEAEVIANGLTFNTALSFLRLNNNQISDRGVEALARALTFNTTIKQL 1417

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N I   G  +L   L  N+ + +L L  N     G  A A+ L  N +LR+L+L+G
Sbjct: 1418 WLESNQISDRGAEALTRVLASNTALMTLSLRENLISNKGVEAFAQALASNTALRKLYLNG 1477

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N I D+G+  L   L+     L  LD+  N IS +G   +A  + +  +L  I L  N I
Sbjct: 1478 NQISDKGMETLARALTP-NTTLESLDLDRNQISDRGVEALAIALVSNTALRTIYLNRNLI 1536

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             D+G E +A AL  N  +TT+ L GN I  KG  A+A+VL  N+ +
Sbjct: 1537 SDKGMEALARALASNTALTTLSLNGNLISDKGMKALAKVLASNTAL 1582



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 116/232 (50%), Gaps = 3/232 (1%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             +S+D+S R   D+    +A  L +N     +    N I+  G++A    L  N  +K L
Sbjct: 1358 LTSLDLSYRGISDKEAEVIANGLTFNTALSFLRLNNNQISDRGVEALARALTFNTTIKQL 1417

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
             L  N I D G + L  +L  N  +  L L    + ++G +A A+ L +N+ LR L LN 
Sbjct: 1418 WLESNQISDRGAEALTRVLASNTALMTLSLRENLISNKGVEAFAQALASNTALRKLYLNG 1477

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            N I   G  +LA AL  N+T+ SL L+ N     G  ALA  L  N +LR ++L+ N I 
Sbjct: 1478 NQISDKGMETLARALTPNTTLESLDLDRNQISDRGVEALAIALVSNTALRTIYLNRNLIS 1537

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LWIN 393
            D+G+ AL   L+S    L  L +  N IS KG   +A+ + +  +L   W+N
Sbjct: 1538 DKGMEALARALASNTA-LTTLSLNGNLISDKGMKALAKVLASNTALKKFWLN 1588



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 115/231 (49%), Gaps = 3/231 (1%)

Query: 348  RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            R  +  L     +L  LD+    IS K A  +A  +    +L ++ L  N I D G E +
Sbjct: 1345 RTQLFQLYMNDSRLTSLDLSYRGISDKEAEVIANGLTFNTALSFLRLNNNQISDRGVEAL 1404

Query: 408  ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            A AL  N TI  + L  N I  +GA A+ RVL  N+ + +L L  N I   G +A ++ L
Sbjct: 1405 ARALTFNTTIKQLWLESNQISDRGAEALTRVLASNTALMTLSLRENLISNKGVEAFAQAL 1464

Query: 468  KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
              +  +  L L   QI   G E +A  L  N T+  LDL  N + D G + LA +  V N
Sbjct: 1465 ASNTALRKLYLNGNQISDKGMETLARALTPNTTLESLDLDRNQISDRGVEALAIAL-VSN 1523

Query: 528  EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
             AL +I L  N I D G  A+A+AL +N   A+T+L+L  N ++  G  AL
Sbjct: 1524 TALRTIYLNRNLISDKGMEALARALASN--TALTTLSLNGNLISDKGMKAL 1572



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 90/174 (51%)

Query: 169  MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
            +      D G   L   L  N     +S   N I+  G++AF   L SN AL+ L L+GN
Sbjct: 1419 LESNQISDRGAEALTRVLASNTALMTLSLRENLISNKGVEAFAQALASNTALRKLYLNGN 1478

Query: 229  PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
             I D+G++ L   L  N  +E L L    + D G +A+A  L +N+ LR + LN N+I  
Sbjct: 1479 QISDKGMETLARALTPNTTLESLDLDRNQISDRGVEALAIALVSNTALRTIYLNRNLISD 1538

Query: 289  SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
             G  +LA AL  N+ + +L LNGN     G  ALAK L  N +L++  L+G+ I
Sbjct: 1539 KGMEALARALASNTALTTLSLNGNLISDKGMKALAKVLASNTALKKFWLNGDLI 1592



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 5/255 (1%)

Query: 268  ELLKNNSILRVL-ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
            E +K   + ++L E+  + ID    T L +  + +S + SL L+        A  +A GL
Sbjct: 1324 ETIKKEKVSKILREIKTSEIDR---TQLFQLYMNDSRLTSLDLSYRGISDKEAEVIANGL 1380

Query: 327  EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
              N +L  L L+ N I D G+ AL   L+     +  L + +N IS +GA  +   + + 
Sbjct: 1381 TFNTALSFLRLNNNQISDRGVEALARALTF-NTTIKQLWLESNQISDRGAEALTRVLASN 1439

Query: 387  KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
             +L+ ++L  N I ++G E  A AL  N  +  + L GN I  KG   +AR L  N+ + 
Sbjct: 1440 TALMTLSLRENLISNKGVEAFAQALASNTALRKLYLNGNQISDKGMETLARALTPNTTLE 1499

Query: 447  SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            SLDL  N I   G +AL+  L  +  + T+ L    I   G E +A  L  N  ++ L L
Sbjct: 1500 SLDLDRNQISDRGVEALAIALVSNTALRTIYLNRNLISDKGMEALARALASNTALTTLSL 1559

Query: 507  RANGLRDEGAKCLAQ 521
              N + D+G K LA+
Sbjct: 1560 NGNLISDKGMKALAK 1574



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 69/124 (55%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A   + ++G    D+G+  LA +L  N T E +    N I+  G++A    L SN AL+T
Sbjct: 1469 ALRKLYLNGNQISDKGMETLARALTPNTTLESLDLDRNQISDRGVEALAIALVSNTALRT 1528

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            + L+ N I D+G++ L   L  N  +  L L+   + D+G KA+A++L +N+ L+   LN
Sbjct: 1529 IYLNRNLISDKGMEALARALASNTALTTLSLNGNLISDKGMKALAKVLASNTALKKFWLN 1588

Query: 283  NNMI 286
             ++I
Sbjct: 1589 GDLI 1592


>gi|15229383|ref|NP_191872.1| RAN GTPase-activating protein 1 [Arabidopsis thaliana]
 gi|334186220|ref|NP_001190166.1| RAN GTPase-activating protein 1 [Arabidopsis thaliana]
 gi|75334877|sp|Q9LE82.1|RAGP1_ARATH RecName: Full=RAN GTPase-activating protein 1; Short=AtRanGAP1;
           Short=RanGAP1
 gi|6708466|gb|AAF25947.1|AF214559_1 RAN GTPase activating protein 1 [Arabidopsis thaliana]
 gi|7573442|emb|CAB87758.1| RAN GTPase activating protein 1 protein [Arabidopsis thaliana]
 gi|14334454|gb|AAK59425.1| putative RAN GTPase activating protein 1 protein [Arabidopsis
           thaliana]
 gi|23297534|gb|AAN12889.1| putative RAN GTPase activating protein 1 protein [Arabidopsis
           thaliana]
 gi|332646917|gb|AEE80438.1| RAN GTPase-activating protein 1 [Arabidopsis thaliana]
 gi|332646918|gb|AEE80439.1| RAN GTPase-activating protein 1 [Arabidopsis thaliana]
          Length = 535

 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 186/415 (44%), Gaps = 44/415 (10%)

Query: 94  PAGVFVSATFVLWKLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTG--KLF---R 148
           P G   SA  V  K   KL++    R  +  +E     V    ++    +G  + F    
Sbjct: 77  PDGDGTSAVHVYAKESSKLMLDVIKRGPQEESE---VEVSKDGDVFFDISGGSRAFIEEE 133

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG--YNQTAE-EVS-FAANGITA 204
           E++  L   A    +++ +  S R+FG E   F A  L    +Q  E ++S F A    A
Sbjct: 134 EARDLLRPLADPRNSYTKIRFSNRSFGSEAAKFAASVLSSIKDQLTEVDLSDFVAGRPEA 193

Query: 205 AGIKA---FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
             ++    F   L+ +  L+ LNLS N +G++G++    ++     +E L L +  + ++
Sbjct: 194 EALEVMNMFSSALEGS-KLRYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISED 252

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
            A+A+ ELL +   +RVL+ +NNM    G T++AE + E  ++     +    G+ G  A
Sbjct: 253 AARAVRELLPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVA 312

Query: 322 LAKGLEGNKSLRELHLHGNSIG----------------------------DEGIRALMSG 353
           LA+ LE    L++L L  N  G                            DEG  AL   
Sbjct: 313 LAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEA 372

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L      L VL++  N I+ K   ++A  I + +SL  +NL  N++ DEG   IA A++ 
Sbjct: 373 LLKSAPSLEVLELAGNDITVKSTGNLAACIASKQSLAKLNLSENELKDEGTILIAKAVEG 432

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +  +  +DL  N I   GA A+A+ +   +    L++  N I  +G   ++++ K
Sbjct: 433 HDQLVEVDLSTNMIRRAGARALAQTVVKKNTFKLLNINGNFISEEGIDEVNDMFK 487



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 141/283 (49%), Gaps = 5/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S +R L+L+ N  G  G  A A  +     L EL+L  + I ++  RA+   L S  
Sbjct: 206 LEGSKLRYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISEDAARAVRELLPS-T 264

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            K+ VL   NN    +GA  +AE ++ C SL         IG EG   +A+AL+    + 
Sbjct: 265 DKIRVLQFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEALEHCSHLK 324

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLK 477
            +DL  N    +G  A+A+ L   + +T + ++Y  +  +G +ALSE +LK   ++  L+
Sbjct: 325 KLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKSAPSLEVLE 384

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           L    I       +A  +    +++ L+L  N L+DEG   +A++ +  ++ L  +DL+ 
Sbjct: 385 LAGNDITVKSTGNLAACIASKQSLAKLNLSENELKDEGTILIAKAVEG-HDQLVEVDLST 443

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N IR  GA A+AQ +       +  LN+  NF+++ G   + D
Sbjct: 444 NMIRRAGARALAQTVVKKNTFKL--LNINGNFISEEGIDEVND 484



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 149/281 (53%), Gaps = 16/281 (5%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG+K LR L+L  N++G++GIRA  S ++S+   L  L + N+ IS   A  V
Sbjct: 200 NMFSSALEGSK-LRYLNLSDNALGEKGIRAFASLINSQHD-LEELYLMNDGISEDAARAV 257

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + +   +  +  + N  GDEGA  IA+ +++  ++         I S+G  A+A  L
Sbjct: 258 RELLPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEAL 317

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD-MLRYN 498
           +  S +  LDL  N  G +G  AL++ L    ++  + + +  +   G E +++ +L+  
Sbjct: 318 EHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKSA 377

Query: 499 NTISILDLRANGLRDEG----AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            ++ +L+L  N +  +     A C+A       ++L  ++L+ NE++D+G   IA+A++ 
Sbjct: 378 PSLEVLELAGNDITVKSTGNLAACIAS-----KQSLAKLNLSENELKDEGTILIAKAVEG 432

Query: 555 NEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 595
           ++   +  ++L+ N + + G  AL  A+ +V + + K +NI
Sbjct: 433 HDQ--LVEVDLSTNMIRRAGARAL--AQTVVKKNTFKLLNI 469


>gi|340053885|emb|CCC48179.1| conserved hypothetical protein [Trypanosoma vivax Y486]
          Length = 433

 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 178/379 (46%), Gaps = 32/379 (8%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           ++L L G  I   G++ + + L  N  V RL +S   + D GA A+AELL+ N  +  L 
Sbjct: 33  QSLELQGKQIVPRGMQIIGNALAKNKHVVRLDISHNKIGDAGAVAVAELLRRNETILHLN 92

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N I   G  +LA A + N +      NG  G            + N++L  L L GN
Sbjct: 93  LAQNGITDVGGIALASAFIPNVSP-----NGQPG------------QWNRTLFTLVLAGN 135

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD  + AL    +  +  L+ +D+  N I   G   +   ++    L   NL  N IG
Sbjct: 136 ELGDATLLALSKAAACHR-DLSRVDLSWNKIGPLGTKCLLRSMQR-NPLCTYNLVANMIG 193

Query: 401 DEGAEKIADALKQ--NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           DEG E + +AL++  N+T+TT++L  N++  +G  A+ R++++N  I  L L  N IG  
Sbjct: 194 DEGTEHLCEALQRYGNKTLTTLNLYRNDVSYRGCKAVGRLIENNEFILDLGLHSNTIGLR 253

Query: 459 GAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYN-NTISILDLRANGLRDEGA 516
           G + L   L    N + ++ L  C +G  GA+ VA ++  +  T+  L +  N + D G 
Sbjct: 254 GMQELRHHLTSAPNRLRSINLNNCMLGDDGAQEVATIIEADLPTLERLSIADNNITDVGG 313

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS-LNLANNFLTKFGQ 575
             + +S  +VN  L S+    N     GA  +   L+  E   V   L+  N+  +   Q
Sbjct: 314 MAIVKSL-MVNNFLISVSCTGNRF---GAKTVELTLQLLESAKVLKLLDFTNSIESSEMQ 369

Query: 576 SALT----DAKDLVYEMSE 590
             LT    DA+ L  ++ E
Sbjct: 370 RTLTFAGGDAEGLRVDVGE 388



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 15/299 (5%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA------- 219
           +D+S    GD G   +AE L  N+T   ++ A NGIT  G  A       N++       
Sbjct: 63  LDISHNKIGDAGAVAVAELLRRNETILHLNLAQNGITDVGGIALASAFIPNVSPNGQPGQ 122

Query: 220 ----LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
               L TL L+GN +GD  +  L      +  + R+ LS   +   G K +   ++ N +
Sbjct: 123 WNRTLFTLVLAGNELGDATLLALSKAAACHRDLSRVDLSWNKIGPLGTKCLLRSMQRNPL 182

Query: 276 LRVLELNNNMIDYSGFTSLAEALLE--NSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
                L  NMI   G   L EAL    N T+ +L+L  N     G  A+ + +E N+ + 
Sbjct: 183 C-TYNLVANMIGDEGTEHLCEALQRYGNKTLTTLNLYRNDVSYRGCKAVGRLIENNEFIL 241

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWI 392
           +L LH N+IG  G++ L   L+S   +L  +++ N  +   GA  VA  I+ +  +L  +
Sbjct: 242 DLGLHSNTIGLRGMQELRHHLTSAPNRLRSINLNNCMLGDDGAQEVATIIEADLPTLERL 301

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++  N+I D G   I  +L  N  + ++   GN   +K      ++L+   V+  LD  
Sbjct: 302 SIADNNITDVGGMAIVKSLMVNNFLISVSCTGNRFGAKTVELTLQLLESAKVLKLLDFT 360


>gi|432119361|gb|ELK38439.1| Protein NLRC5 [Myotis davidii]
          Length = 1522

 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 159/339 (46%), Gaps = 14/339 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +   G+  L   L     +E L LS+  L +E +  +A  LK  S LR L+
Sbjct: 1177 KTFRLASSCVSSGGLAPLASGLSRCRHLEELDLSNNQLGEEASTVLAGALKGRSWLRRLD 1236

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++  +D S    LA+ L   + ++SL L+G+  G +G + LAK LE   SL EL L  N
Sbjct: 1237 LSHFPLDDSTLAVLAQGLSHMTRLQSLCLSGDDIGDVGCSCLAKALEAATSLEELGLSHN 1296

Query: 341  SIGDEG---IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             IGD G   + A++ GL     +L  +D+  N I   G   + E +  CK L  + L  N
Sbjct: 1297 QIGDAGAQHLAAVLPGLP----ELRRVDLSANGICPAGGVRLVESLALCKHLEELILSAN 1352

Query: 398  DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
             I   G  ++ ++L   + +  + LG N +    A  +AR L  +  +  L L  + +G 
Sbjct: 1353 GICPAGGVRLVESLALCKHLEELMLGCNALGDPTALELARALPPH--LRVLHLRSSRLGP 1410

Query: 458  DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
            +GA +L   L    ++  + L  C+I    A+ +A        +  + L  N L DE A 
Sbjct: 1411 EGALSLGRALDGCPHLEEISLVSCEIDDQAAKLLAASFMLCPALEEILLSWNLLGDEAAA 1470

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
             LAQ    +   L S+DL  N +  D     AQ L++ E
Sbjct: 1471 ELAQVLPRMQR-LKSVDLWNNHVPPDA----AQRLQSQE 1504



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 131/318 (41%), Gaps = 31/318 (9%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R    +D+S    G+E    LA +L        +  +   +  + +      L     L+
Sbjct: 1202 RHLEELDLSNNQLGEEASTVLAGALKGRSWLRRLDLSHFPLDDSTLAVLAQGLSHMTRLQ 1261

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            +L LSG+ IGD G  CL   L     +E L LS   + D GA+ +A +L     LR ++L
Sbjct: 1262 SLCLSGDDIGDVGCSCLAKALEAATSLEELGLSHNQIGDAGAQHLAAVLPGLPELRRVDL 1321

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            + N I  +G   L E+L     +  L L+ N     G   L + L   K L EL L  N+
Sbjct: 1322 SANGICPAGGVRLVESLALCKHLEELILSANGICPAGGVRLVESLALCKHLEELMLGCNA 1381

Query: 342  IGD----EGIRALMSGL------SSRKGKLAVLDIG---------------NNSISAKGA 376
            +GD    E  RAL   L      SSR G    L +G               +  I  + A
Sbjct: 1382 LGDPTALELARALPPHLRVLHLRSSRLGPEGALSLGRALDGCPHLEEISLVSCEIDDQAA 1441

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
              +A     C +L  I L  N +GDE A ++A  L + + + ++DL  N++    A  + 
Sbjct: 1442 KLLAASFMLCPALEEILLSWNLLGDEAAAELAQVLPRMQRLKSVDLWNNHVPPDAAQRL- 1500

Query: 437  RVLKDNSVITSLDLAYNP 454
                  S    LD ++ P
Sbjct: 1501 -----QSQEPRLDFSFFP 1513



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 34/280 (12%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           +++ F    +T A + A   VL        L+  G P+     +C  + L     VE L+
Sbjct: 713 DQLPFHNFPLTYADLAALTSVLGHREVPIHLDFEGCPLEP---RCP-EALAGCGRVESLR 768

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH---- 308
           L+   +   G   + + L     L  + L++N +  +    L EA +   TIR L     
Sbjct: 769 LAGSKITARGIYHLVQALPLCPHLEEVSLSHNHVSMATLLGLTEAAVTCPTIRMLQVREA 828

Query: 309 ---------------LNGNYGGAL---GANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
                          L G     L       L   L     L E+ L GN + DEG R L
Sbjct: 829 DLIILLSPPTETAAELPGLQKCCLTVRDVEMLIAQLREGPLLEEVDLSGNQLEDEGCR-L 887

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-----AE 405
           ++  + +      LD+ +N +S  G   V   +  C++L   +L+++   D G      E
Sbjct: 888 VAEAAPQLHIAGKLDLSDNGLSVAGLPWVLRAVSMCQNL--ADLHISRFTDCGLSQMHVE 945

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            + + L++   ++ +DL GN+I  +GA  +   L     I
Sbjct: 946 PLCELLRKCEDLSQLDLSGNSISQEGALCLVETLPSCPRI 985



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/280 (20%), Positives = 103/280 (36%), Gaps = 30/280 (10%)

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           L   S+   L  +N  + Y+   +L   L      R + ++ ++ G        + L G 
Sbjct: 706 LMARSLPDQLPFHNFPLTYADLAALTSVL----GHREVPIHLDFEGCPLEPRCPEALAGC 761

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             +  L L G+ I   GI  L+  L      L  + + +N +S      + E    C ++
Sbjct: 762 GRVESLRLAGSKITARGIYHLVQALPLCP-HLEEVSLSHNHVSMATLLGLTEAAVTCPTI 820

Query: 390 LWINLYMNDI------GDEGA----------------EKIADALKQNRTITTIDLGGNNI 427
             + +   D+        E A                E +   L++   +  +DL GN +
Sbjct: 821 RMLQVREADLIILLSPPTETAAELPGLQKCCLTVRDVEMLIAQLREGPLLEEVDLSGNQL 880

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW---CQIG 484
             +G   +A       +   LDL+ N +   G   +   +    N+  L +     C + 
Sbjct: 881 EDEGCRLVAEAAPQLHIAGKLDLSDNGLSVAGLPWVLRAVSMCQNLADLHISRFTDCGLS 940

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
               E + ++LR    +S LDL  N +  EGA CL ++  
Sbjct: 941 QMHVEPLCELLRKCEDLSQLDLSGNSISQEGALCLVETLP 980



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 48/229 (20%), Positives = 103/229 (44%), Gaps = 14/229 (6%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+ ++G      G++ L ++L      EEVS + N ++ A +    G+ ++ +   T+ +
Sbjct: 766 SLRLAGSKITARGIYHLVQALPLCPHLEEVSLSHNHVSMATLL---GLTEAAVTCPTIRM 822

Query: 226 SGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
               + +  +  L     + A  +  LQ   + +RD   + +   L+   +L  ++L+ N
Sbjct: 823 LQ--VREADLIILLSPPTETAAELPGLQKCCLTVRD--VEMLIAQLREGPLLEEVDLSGN 878

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            ++  G   +AEA  +      L L+ N     G   + + +   ++L +LH+  +   D
Sbjct: 879 QLEDEGCRLVAEAAPQLHIAGKLDLSDNGLSVAGLPWVLRAVSMCQNLADLHI--SRFTD 936

Query: 345 EGIRAL----MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            G+  +    +  L  +   L+ LD+  NSIS +GA  + E + +C  +
Sbjct: 937 CGLSQMHVEPLCELLRKCEDLSQLDLSGNSISQEGALCLVETLPSCPRI 985



 Score = 39.3 bits (90), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 76/197 (38%), Gaps = 39/197 (19%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
               VD+SG    DEG   +AE+      A ++  + NG++ AG+            L+ +
Sbjct: 870  LEEVDLSGNQLEDEGCRLVAEAAPQLHIAGKLDLSDNGLSVAGLP---------WVLRAV 920

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            ++  N         L D+ +        + +   L     + + ELL+    L  L+L+ 
Sbjct: 921  SMCQN---------LADLHIS-------RFTDCGLSQMHVEPLCELLRKCEDLSQLDLSG 964

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA-----LAKGLEGNKSLRELHLH 338
            N I   G   L E L     IR   +N      LGA        ++  E  K+LR   L 
Sbjct: 965  NSISQEGALCLVETLPSCPRIREAAVN------LGAEQSFRIHFSRQEEAGKTLR---LR 1015

Query: 339  GNSIGDEGIRALMSGLS 355
              S   E +  L +GLS
Sbjct: 1016 ECSFRPEHVPRLAAGLS 1032


>gi|320166643|gb|EFW43542.1| hypothetical protein CAOG_01586 [Capsaspora owczarzaki ATCC 30864]
          Length = 1804

 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 127/245 (51%), Gaps = 9/245 (3%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           +Q+  A++  N +   + DE  + +   L+ N  + +L L    + D+GA A+AE LK+ 
Sbjct: 20  MQAKDAIQDQNWTEMGLCDEEAEAIALGLMANTNLLQLDLKKNQIGDKGAIALAEALKHG 79

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           S L  L LN+NMI  +G  +LA+ L  NS ++ L L+ N+    GA ALAK L  N SLR
Sbjct: 80  STLTSLNLNSNMITTTGLMALADCLSVNSQLKELFLDWNHIDCQGARALAKALATNTSLR 139

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L  N I  +G  A+   L S    L VL++  N + + G    A  +K  + L  +N
Sbjct: 140 RLDLEANLIRLDGGIAIAKSLESNSA-LEVLNLKGNRVGSTGTSAFATALKVNRKLCKLN 198

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN----SVITSLD 449
           L  ND+G  GA+ +  +LK N  +T + L  N I  +    + +VLK N      + +LD
Sbjct: 199 LSSNDVGSRGAKALGLSLKSNIGLTELSLSDNEIDDE----VVKVLKTNLMLYPTLKTLD 254

Query: 450 LAYNP 454
           L  NP
Sbjct: 255 LTGNP 259



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 106/211 (50%), Gaps = 2/211 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+     GD+G   LAE+L +  T   ++  +N IT  G+ A    L  N  LK L L 
Sbjct: 57  LDLKKNQIGDKGAIALAEALKHGSTLTSLNLNSNMITTTGLMALADCLSVNSQLKELFLD 116

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  +G + L   L  N  + RL L +  +R +G  AIA+ L++NS L VL L  N +
Sbjct: 117 WNHIDCQGARALAKALATNTSLRRLDLEANLIRLDGGIAIAKSLESNSALEVLNLKGNRV 176

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             +G ++ A AL  N  +  L+L+ N  G+ GA AL   L+ N  L EL L  N I DE 
Sbjct: 177 GSTGTSAFATALKVNRKLCKLNLSSNDVGSRGAKALGLSLKSNIGLTELSLSDNEIDDEV 236

Query: 347 IRALMSGLSSRKGKLAVLDI-GNNSISAKGA 376
           ++ L + L      L  LD+ GN  IS   A
Sbjct: 237 VKVLKTNLMLYP-TLKTLDLTGNPKISTTTA 266



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 115/252 (45%), Gaps = 29/252 (11%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           L DE A+AIA  L  N+ L  L+L  N I   G  +LAEAL   ST+ SL+LN N     
Sbjct: 36  LCDEEAEAIALGLMANTNLLQLDLKKNQIGDKGAIALAEALKHGSTLTSLNLNSNMITTT 95

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G  ALA  L  N  L+EL L  N I  +G RAL   L++                     
Sbjct: 96  GLMALADCLSVNSQLKELFLDWNHIDCQGARALAKALATNT------------------- 136

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
                     SL  ++L  N I  +G   IA +L+ N  +  ++L GN + S G SA A 
Sbjct: 137 ----------SLRRLDLEANLIRLDGGIAIAKSLESNSALEVLNLKGNRVGSTGTSAFAT 186

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            LK N  +  L+L+ N +G+ GAKAL   LK +  +  L L   +I     + +   L  
Sbjct: 187 ALKVNRKLCKLNLSSNDVGSRGAKALGLSLKSNIGLTELSLSDNEIDDEVVKVLKTNLML 246

Query: 498 NNTISILDLRAN 509
             T+  LDL  N
Sbjct: 247 YPTLKTLDLTGN 258



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 6/214 (2%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DE   A+  GL +    L  LD+  N I  KGA  +AE +K+  +L  +NL  N I  
Sbjct: 36  LCDEEAEAIALGLMANTNLLQ-LDLKKNQIGDKGAIALAEALKHGSTLTSLNLNSNMITT 94

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            G   +AD L  N  +  + L  N+I  +GA A+A+ L  N+ +  LDL  N I  DG  
Sbjct: 95  TGLMALADCLSVNSQLKELFLDWNHIDCQGARALAKALATNTSLRRLDLEANLIRLDGGI 154

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           A+++ L+ +  +  L L   ++G++G    A  L+ N  +  L+L +N +   GAK L  
Sbjct: 155 AIAKSLESNSALEVLNLKGNRVGSTGTSAFATALKVNRKLCKLNLSSNDVGSRGAKALGL 214

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           S K  N  LT + L+ NEI D+    + + LK N
Sbjct: 215 SLK-SNIGLTELSLSDNEIDDE----VVKVLKTN 243



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 101/180 (56%), Gaps = 3/180 (1%)

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           LL ++L  N IGD+GA  +A+ALK   T+T+++L  N I + G  A+A  L  NS +  L
Sbjct: 54  LLQLDLKKNQIGDKGAIALAEALKHGSTLTSLNLNSNMITTTGLMALADCLSVNSQLKEL 113

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L +N I   GA+AL++ L  + ++  L L    I   G   +A  L  N+ + +L+L+ 
Sbjct: 114 FLDWNHIDCQGARALAKALATNTSLRRLDLEANLIRLDGGIAIAKSLESNSALEVLNLKG 173

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           N +   G    A + KV N  L  ++L+ N++   GA A+  +LK+N  + +T L+L++N
Sbjct: 174 NRVGSTGTSAFATALKV-NRKLCKLNLSSNDVGSRGAKALGLSLKSN--IGLTELSLSDN 230



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 82/183 (44%), Gaps = 31/183 (16%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + DE AE IA  L  N  +  +DL  N I  KGA A+A  LK  S +TSL+L  N I   
Sbjct: 36  LCDEEAEAIALGLMANTNLLQLDLKKNQIGDKGAIALAEALKHGSTLTSLNLNSNMITTT 95

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           G  AL++ L  +  +  L L W  I   GA  +A                        K 
Sbjct: 96  GLMALADCLSVNSQLKELFLDWNHIDCQGARALA------------------------KA 131

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           LA      N +L  +DL  N IR DG  AIA++L++N  + V  LNL  N +   G SA 
Sbjct: 132 LA-----TNTSLRRLDLEANLIRLDGGIAIAKSLESNSALEV--LNLKGNRVGSTGTSAF 184

Query: 579 TDA 581
             A
Sbjct: 185 ATA 187



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
           GL DE A+ +A    + N  L  +DL  N+I D GA A+A+ALK      +TSLNL +N 
Sbjct: 35  GLCDEEAEAIALGL-MANTNLLQLDLKKNQIGDKGAIALAEALKHGS--TLTSLNLNSNM 91

Query: 570 LTKFGQSALTDAKDLVYEMSE 590
           +T  G  AL D   +  ++ E
Sbjct: 92  ITTTGLMALADCLSVNSQLKE 112


>gi|390477774|ref|XP_003735361.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC5, partial [Callithrix
            jacchus]
          Length = 1812

 Score =  111 bits (278), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 102/356 (28%), Positives = 168/356 (47%), Gaps = 10/356 (2%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K   L+ + +  EG+  L   L     +E L+ S+ +  +EG KA+   L+   +L+ L+
Sbjct: 1444 KKFRLTSSRVSTEGLAHLASGLGHCHHLEELEWSNTEFDEEGTKALMRALEEKWMLKRLD 1503

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L   + ++SL LN N  G +    L++ L    SL EL L  N
Sbjct: 1504 LSHLLLNGSTLDLLTRGLSHMTLLQSLRLNRNSIGDVDCCHLSEALRAATSLEELDLSYN 1563

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G+  L + L  R  +L  +D+  NSIS  G   +AE +  C+ L  + L  ND+G
Sbjct: 1564 QIGDAGVGYLATIL-PRLPELRKIDLSANSISPAGGVKLAESLALCRCLEELMLGCNDLG 1622

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A ++A  L Q+  +  + L  +++  KGA ++ + L  +  +  + LA N + A+G 
Sbjct: 1623 DHTALELAQELPQH--LRVLRLPSSHLGPKGALSLVQALDGSPHVEEISLAENNL-AEGV 1679

Query: 461  KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
                + L     I+ +    C+I    A+ +         + ++ L  N L DE A  LA
Sbjct: 1680 PRFCKGLPLLRRIDLVS---CKIDNQTAKLLTSSFTLCPALEVILLSWNLLGDEAAAELA 1736

Query: 521  QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 576
            Q    +   L  +DL  N+I   GA+ +A+ L A   V V  L   NN      QS
Sbjct: 1737 QVLPRMGR-LKRVDLEKNQITARGAWLLAEGL-AQSSVQVIRL-WNNNIPCNVAQS 1789



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 79/297 (26%), Positives = 132/297 (44%), Gaps = 9/297 (3%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
            E  + L    +E      +D+S        L  L   L +    + +    N I      
Sbjct: 1484 EGTKALMRALEEKWMLKRLDLSHLLLNGSTLDLLTRGLSHMTLLQSLRLNRNSIGDVDCC 1543

Query: 209  AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                 L++  +L+ L+LS N IGD GV  L  IL     + ++ LS+  +   G   +AE
Sbjct: 1544 HLSEALRAATSLEELDLSYNQIGDAGVGYLATILPRLPELRKIDLSANSISPAGGVKLAE 1603

Query: 269  LLKNNSILRVLELN-NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             L     L  L L  N++ D++    LA+ L ++  +R L L  ++ G  GA +L + L+
Sbjct: 1604 SLALCRCLEELMLGCNDLGDHTAL-ELAQELPQH--LRVLRLPSSHLGPKGALSLVQALD 1660

Query: 328  GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            G+  + E+ L  N++  EG+     GL      L  +D+ +  I  + A  +      C 
Sbjct: 1661 GSPHVEEISLAENNLA-EGVPRFCKGLP----LLRRIDLVSCKIDNQTAKLLTSSFTLCP 1715

Query: 388  SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +L  I L  N +GDE A ++A  L +   +  +DL  N I ++GA  +A  L  +SV
Sbjct: 1716 ALEVILLSWNLLGDEAAAELAQVLPRMGRLKRVDLEKNQITARGAWLLAEGLAQSSV 1772



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 108/464 (23%), Positives = 187/464 (40%), Gaps = 42/464 (9%)

Query: 165  SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
            SS+D+S  N   E    L E+L      +E S       +  I       + + A KTL 
Sbjct: 1221 SSLDLSHNNASQESALCLLETLSSCPRVQEASVNLGSKQSFQIH----FSKEDQAGKTLR 1276

Query: 225  LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            LS      E V  L   L  +  +  L L+   L  E    +  L++  + L  L +   
Sbjct: 1277 LSECSFRPEHVSRLAAGLSQSLQLMELMLTQCCLGQEQLTTLLSLVQRPAGLFSLRVQEP 1336

Query: 285  MIDYSGFTSLAEALLENS----------TIRSLHLNGNYG------------------GA 316
             +D +G  SL E   + S          T + LH+   +                   G 
Sbjct: 1337 WVDQAGVLSLLEVCAQASGNVTEISISETQQQLHVQLEFPRQEENPEAVALRLAHCDLGT 1396

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEG--IRALMSGLSSRKGKLAVLDIGNNSISAK 374
              +  + + +E    L++L L   ++ ++G     L+  L     +L    + ++ +S +
Sbjct: 1397 HHSLLVRQLMETCARLQQLSLSQVNLCEDGDSSSLLLRSLLLSLSELKKFRLTSSRVSTE 1456

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G  H+A  + +C  L  +     +  +EG + +  AL++   +  +DL    ++      
Sbjct: 1457 GLAHLASGLGHCHHLEELEWSNTEFDEEGTKALMRALEEKWMLKRLDLSHLLLNGSTLDL 1516

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            + R L   +++ SL L  N IG      LSE L+   ++  L L + QIG +G  ++A +
Sbjct: 1517 LTRGLSHMTLLQSLRLNRNSIGDVDCCHLSEALRAATSLEELDLSYNQIGDAGVGYLATI 1576

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            L     +  +DL AN +   G   LA+S  +    L  + L  N++ D  A  +AQ L  
Sbjct: 1577 LPRLPELRKIDLSANSISPAGGVKLAESLALC-RCLEELMLGCNDLGDHTALELAQELPQ 1635

Query: 555  NEDVAVTSLNLANNFLTKFGQSALTDAKD---LVYEMSEKEVNI 595
            +  V    L L ++ L   G  +L  A D    V E+S  E N+
Sbjct: 1636 HLRV----LRLPSSHLGPKGALSLVQALDGSPHVEEISLAENNL 1675


>gi|334348993|ref|XP_001381520.2| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Monodelphis domestica]
          Length = 921

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 139/300 (46%), Gaps = 25/300 (8%)

Query: 188 YNQTAEEVS-FAANGITAAGIK------------AFDGVLQSNIALKTLNLSGNPIGDEG 234
           Y   ++ VS  AA GI A  +K            A   VL        L+L  N + D G
Sbjct: 629 YEAQSQRVSRLAARGICANYLKLAYCNTCSADCSALAFVLHHVPKQLALDLDNNNLCDYG 688

Query: 235 VK----CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSG 290
           VK    C   + V    V R+        D GA+ ++E L    I+  L L NN I   G
Sbjct: 689 VKELRPCFGRLTVIRLSVNRIA-------DAGARVLSEELTKYKIVTFLGLYNNQITDVG 741

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            T +A+ L E   +  L +  N   + G   LA  L+ ++S+ ++ + GN IGDEG +A 
Sbjct: 742 ATYVAKILEECPGLTHLKIGANLLTSEGGKCLAAALKKSRSILDIGMWGNKIGDEGAKAF 801

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              L      LA L +  N IS +G   +A+ ++   S+    L  N++ DE AE +A+ 
Sbjct: 802 ADALRDHPS-LATLSLAFNGISTEGGKSLAQALQQNSSMKIFWLTKNNLDDEAAESLAEM 860

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           L+ N+T+  + L  N I +KG S +A  L+ NS I  + L+ NPI  + AK      +FH
Sbjct: 861 LEVNQTLNDLWLIQNQITAKGLSRLADALQKNSSILDICLSGNPIKPEEAKVFQHDKRFH 920



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 6/268 (2%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLEL-NNNMIDYSGFTSLAEALLENSTIRSLHL 309
           L+L+  +       A+A +L +      L+L NNN+ DY G   L       + IR   L
Sbjct: 649 LKLAYCNTCSADCSALAFVLHHVPKQLALDLDNNNLCDY-GVKELRPCFGRLTVIR---L 704

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N     GA  L++ L   K +  L L+ N I D G   +   L    G L  L IG N
Sbjct: 705 SVNRIADAGARVLSEELTKYKIVTFLGLYNNQITDVGATYVAKILEECPG-LTHLKIGAN 763

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            ++++G   +A  +K  +S+L I ++ N IGDEGA+  ADAL+ + ++ T+ L  N I +
Sbjct: 764 LLTSEGGKCLAAALKKSRSILDIGMWGNKIGDEGAKAFADALRDHPSLATLSLAFNGIST 823

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           +G  ++A+ L+ NS +    L  N +  + A++L+E+L+ +  +N L L   QI A G  
Sbjct: 824 EGGKSLAQALQQNSSMKIFWLTKNNLDDEAAESLAEMLEVNQTLNDLWLIQNQITAKGLS 883

Query: 490 FVADMLRYNNTISILDLRANGLRDEGAK 517
            +AD L+ N++I  + L  N ++ E AK
Sbjct: 884 RLADALQKNSSILDICLSGNPIKPEEAK 911



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 5/240 (2%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            +ALA  L        L L  N++ D G++ L        G+L V+ +  N I+  GA  
Sbjct: 661 CSALAFVLHHVPKQLALDLDNNNLCDYGVKELRPCF----GRLTVIRLSVNRIADAGARV 716

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           ++E +   K + ++ LY N I D GA  +A  L++   +T + +G N + S+G   +A  
Sbjct: 717 LSEELTKYKIVTFLGLYNNQITDVGATYVAKILEECPGLTHLKIGANLLTSEGGKCLAAA 776

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK +  I  + +  N IG +GAKA ++ L+ H ++ TL L +  I   G + +A  L+ N
Sbjct: 777 LKKSRSILDIGMWGNKIGDEGAKAFADALRDHPSLATLSLAFNGISTEGGKSLAQALQQN 836

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           +++ I  L  N L DE A+ LA+  + VN+ L  + L  N+I   G   +A AL+ N  +
Sbjct: 837 SSMKIFWLTKNNLDDEAAESLAEMLE-VNQTLNDLWLIQNQITAKGLSRLADALQKNSSI 895



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++A+ L        +   AN +T+ G K   
Sbjct: 715 RVLSEELTKYKIVTFLGLYNNQITDVGATYVAKILEECPGLTHLKIGANLLTSEGGKCLA 774

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ + ++  + + GN IGDEG K   D L D+  +  L L+   +  EG K++A+ L+
Sbjct: 775 AALKKSRSILDIGMWGNKIGDEGAKAFADALRDHPSLATLSLAFNGISTEGGKSLAQALQ 834

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS +++  L  N +D     SLAE L  N T+  L L  N   A G + LA  L+ N S
Sbjct: 835 QNSSMKIFWLTKNNLDDEAAESLAEMLEVNQTLNDLWLIQNQITAKGLSRLADALQKNSS 894

Query: 332 LRELHLHGNSIGDE 345
           + ++ L GN I  E
Sbjct: 895 ILDICLSGNPIKPE 908



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 4/214 (1%)

Query: 159 KELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           KELR      + + +S     D G   L+E L   +    +    N IT  G      +L
Sbjct: 690 KELRPCFGRLTVIRLSVNRIADAGARVLSEELTKYKIVTFLGLYNNQITDVGATYVAKIL 749

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           +    L  L +  N +  EG KCL   L  +  +  + +    + DEGAKA A+ L+++ 
Sbjct: 750 EECPGLTHLKIGANLLTSEGGKCLAAALKKSRSILDIGMWGNKIGDEGAKAFADALRDHP 809

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L L  N I   G  SLA+AL +NS+++   L  N      A +LA+ LE N++L +
Sbjct: 810 SLATLSLAFNGISTEGGKSLAQALQQNSSMKIFWLTKNNLDDEAAESLAEMLEVNQTLND 869

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L L  N I  +G+  L   L      L +   GN
Sbjct: 870 LWLIQNQITAKGLSRLADALQKNSSILDICLSGN 903



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 36/210 (17%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           K   LD+ NN++   G   V E       L  I L +N I D GA  +++ L + + +T 
Sbjct: 673 KQLALDLDNNNLCDYG---VKELRPCFGRLTVIRLSVNRIADAGARVLSEELTKYKIVTF 729

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           + L  N I   GA+ +A++L++   +T L +  N + ++G K L+  LK           
Sbjct: 730 LGLYNNQITDVGATYVAKILEECPGLTHLKIGANLLTSEGGKCLAAALK----------- 778

Query: 480 WCQIGASGAEFVADMLRYNNTISILD--LRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
                               + SILD  +  N + DEGAK  A + +  + +L ++ LAF
Sbjct: 779 -------------------KSRSILDIGMWGNKIGDEGAKAFADALRD-HPSLATLSLAF 818

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           N I  +G  ++AQAL+ N  + +  L   N
Sbjct: 819 NGISTEGGKSLAQALQQNSSMKIFWLTKNN 848



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 81/178 (45%), Gaps = 35/178 (19%)

Query: 135 GTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEE 194
           G NLL+   GK        L    K+ R+   + M G   GDE                 
Sbjct: 761 GANLLTSEGGK-------CLAAALKKSRSILDIGMWGNKIGDE----------------- 796

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
                      G KAF   L+ + +L TL+L+ N I  EG K L   L  N+ ++   L+
Sbjct: 797 -----------GAKAFADALRDHPSLATLSLAFNGISTEGGKSLAQALQQNSSMKIFWLT 845

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
             +L DE A+++AE+L+ N  L  L L  N I   G + LA+AL +NS+I  + L+GN
Sbjct: 846 KNNLDDEAAESLAEMLEVNQTLNDLWLIQNQITAKGLSRLADALQKNSSILDICLSGN 903



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 34/68 (50%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++  N  DE    LAE L  NQT  ++    N ITA G+      LQ N ++  + LSGN
Sbjct: 844 LTKNNLDDEAAESLAEMLEVNQTLNDLWLIQNQITAKGLSRLADALQKNSSILDICLSGN 903

Query: 229 PIGDEGVK 236
           PI  E  K
Sbjct: 904 PIKPEEAK 911



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 6/103 (5%)

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
           N LKL +C   ++    +A +L +      LDL  N L D G K L   F      LT I
Sbjct: 647 NYLKLAYCNTCSADCSALAFVLHHVPKQLALDLDNNNLCDYGVKELRPCFG----RLTVI 702

Query: 534 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 576
            L+ N I D GA  +++ L   +   VT L L NN +T  G +
Sbjct: 703 RLSVNRIADAGARVLSEELTKYK--IVTFLGLYNNQITDVGAT 743


>gi|326526881|dbj|BAK00829.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1374

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 140/439 (31%), Positives = 193/439 (43%), Gaps = 57/439 (12%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R    +       GD G   LA+ L   Q+   +   AN +   G++A    L     L+
Sbjct: 740  RTLRELSFFNNGIGDAGALALAKHL--PQSIRTLFLGANQVGDVGVQALAARLPQT--LR 795

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TL L  N IGD G + L   L     +  L L +  +   GA A+A  L  +  + VL L
Sbjct: 796  TLTLEDNGIGDVGAQALALCLPQT--LRELSLHTNQIGQVGAMALATRLPQS--IEVLSL 851

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            + N I  +G  +LA  L +  +   L+L  N  G  GA ALA  L   ++LREL LH N 
Sbjct: 852  DYNQIGVAGAQTLAADLPQ--SFHKLYLGSNQIGEAGAKALAARLP--QTLRELSLHTNQ 907

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            IGD G RAL + L      L VL + NN I   GA  +A  +   +SL  + L  N IG+
Sbjct: 908  IGDVGTRALATQLPQ---SLEVLYLYNNQIGDAGAQALAADLP--QSLRKLYLPENQIGE 962

Query: 402  EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
             GAE +A  L Q  ++  + L  N I   GA A+A  L    V+  L L  N IG  GA+
Sbjct: 963  VGAEALALCLPQ--SLRELSLHTNQIGEVGAKALAMRLPQ--VLELLYLCGNNIGDAGAQ 1018

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY--------NN-------------- 499
            AL+  L     +  L L   ++G  GA+ +A  L          NN              
Sbjct: 1019 ALA--LGLPQPLRELSLYANRVGKVGAKVLATRLPRSLVALYLGNNQIGDAGALALAARL 1076

Query: 500  --TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
              T+  L L  N + D GA+ LA     + + L  + L  N I   GA A+A  L  + +
Sbjct: 1077 PRTLQKLHLEKNQIGDAGAQVLA---AYLPQTLRELSLHTNHISQVGARALATQLPQSLE 1133

Query: 558  VAVTSLNLANNFLTKFGQS 576
            V    L L NN   KFG +
Sbjct: 1134 V----LYLCNN---KFGDT 1145



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 187/429 (43%), Gaps = 54/429 (12%)

Query: 174  FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            FG  G   LA +L   Q+  E+    N I   G +A    L  +  L+ LNL  N IGD 
Sbjct: 648  FGALGAKGLAANL--PQSLRELHLENNSIGDTGAEALAACLPQS--LEALNLDNNSIGDV 703

Query: 234  GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
            G + L   L  +  +  L L +  + D GA+ +A  L     LR L   NN I  +G  +
Sbjct: 704  GAQALAAHLPQS--LHGLYLQNNQIGDAGAQDLAAHLPRT--LRELSFFNNGIGDAGALA 759

Query: 294  LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
            LA+ L +  +IR+L L  N  G +G  ALA  L   ++LR L L  N IGD G +AL   
Sbjct: 760  LAKHLPQ--SIRTLFLGANQVGDVGVQALAARLP--QTLRTLTLEDNGIGDVGAQALALC 815

Query: 354  LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
            L      L  L +  N I   GA  +A  +   +S+  ++L  N IG  GA+ +A  L Q
Sbjct: 816  LPQ---TLRELSLHTNQIGQVGAMALATRLP--QSIEVLSLDYNQIGVAGAQTLAADLPQ 870

Query: 414  NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS-------EV 466
              +   + LG N I   GA A+A  L     +  L L  N IG  G +AL+       EV
Sbjct: 871  --SFHKLYLGSNQIGEAGAKALAARLPQT--LRELSLHTNQIGDVGTRALATQLPQSLEV 926

Query: 467  LKFHGN-----------------INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            L  + N                 +  L L   QIG  GAE +A  L    ++  L L  N
Sbjct: 927  LYLYNNQIGDAGAQALAADLPQSLRKLYLPENQIGEVGAEALA--LCLPQSLRELSLHTN 984

Query: 510  GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
             + + GAK LA     V E L    L  N I D GA A+A  L       +  L+L  N 
Sbjct: 985  QIGEVGAKALAMRLPQVLELLY---LCGNNIGDAGAQALALGLPQ----PLRELSLYANR 1037

Query: 570  LTKFGQSAL 578
            + K G   L
Sbjct: 1038 VGKVGAKVL 1046



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 148/303 (48%), Gaps = 24/303 (7%)

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L +L+ NN  +  +G  +LA  L   ST+  L L  N  GALGA  LA  L   +SLREL
Sbjct: 612 LALLKFNNCCLGDAGVQALAGHL--PSTLCKLFLQKNEFGALGAKGLAANLP--QSLREL 667

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           HL  NSIGD G  AL + L      L  L++ NNSI   GA  +A ++   +SL  + L 
Sbjct: 668 HLENNSIGDTGAEALAACLPQ---SLEALNLDNNSIGDVGAQALAAHLP--QSLHGLYLQ 722

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IGD GA+ +A  L   RT+  +    N I   GA A+A+ L  +  I +L L  N +
Sbjct: 723 NNQIGDAGAQDLAAHLP--RTLRELSFFNNGIGDAGALALAKHLPQS--IRTLFLGANQV 778

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G  G +AL+   +    + TL L    IG  GA+ +A  L    T+  L L  N +   G
Sbjct: 779 GDVGVQALAA--RLPQTLRTLTLEDNGIGDVGAQALA--LCLPQTLRELSLHTNQIGQVG 834

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
           A  LA       +++  + L +N+I      A AQ L A+   +   L L +N + + G 
Sbjct: 835 AMALATRLP---QSIEVLSLDYNQI----GVAGAQTLAADLPQSFHKLYLGSNQIGEAGA 887

Query: 576 SAL 578
            AL
Sbjct: 888 KAL 890



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 186/415 (44%), Gaps = 56/415 (13%)

Query: 183  AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
            A +L   Q+  E+S   N I   G KA    ++    L+ L L GN IGD G + L   L
Sbjct: 967  ALALCLPQSLRELSLHTNQIGEVGAKAL--AMRLPQVLELLYLCGNNIGDAGAQALALGL 1024

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELLK---------NNSI---------------LRV 278
                 +  L L +  +   GAK +A  L          NN I               L+ 
Sbjct: 1025 PQP--LRELSLYANRVGKVGAKVLATRLPRSLVALYLGNNQIGDAGALALAARLPRTLQK 1082

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L L  N I  +G   LA  L +  T+R L L+ N+   +GA ALA  L   +SL  L+L 
Sbjct: 1083 LHLEKNQIGDAGAQVLAAYLPQ--TLRELSLHTNHISQVGARALATQLP--QSLEVLYLC 1138

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N  GD G +AL + L      L +L +G+      GA  +A +I   +SL  ++L  N 
Sbjct: 1139 NNKFGDTGAKALATRLPK---SLKILGLGSIHFGDSGAHTLAVHIP--QSLEQLSLPGNQ 1193

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            IGD GA+ +A  L Q  ++  + L  N+I   GA A A  L  +  +  L+L YN IG  
Sbjct: 1194 IGDAGAQVLAAHLPQ--SLRVLYLWYNHIGDAGALAFAARLPHS--LEQLNLDYNKIGDA 1249

Query: 459  GAKALSEVLKFHGNINTLKLGWC--QIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            GA+AL+    FH   + LKL      I  +GA+ +A  L    ++  L L  N + D GA
Sbjct: 1250 GAQALA----FHLPRSLLKLHLHGNHISDAGAQALA--LHLPQSLRKLALGQNQISDTGA 1303

Query: 517  KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            K  A         L  +DL  N I D GA  +A +L     + ++  NL  N ++
Sbjct: 1304 KAFAARLPPF---LEQLDLDSNNIGDAGAGILASSLP----LKLSKFNLKGNRIS 1351



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 128/296 (43%), Gaps = 43/296 (14%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R    + +     GD G   LA  L   QT  E+S   N I+  G +A    L  +  L+
Sbjct: 1078 RTLQKLHLEKNQIGDAGAQVLAAYL--PQTLRELSLHTNHISQVGARALATQLPQS--LE 1133

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGV------------------------ERLQLSSVD 257
             L L  N  GD G K L   L  +  +                        E+L L    
Sbjct: 1134 VLYLCNNKFGDTGAKALATRLPKSLKILGLGSIHFGDSGAHTLAVHIPQSLEQLSLPGNQ 1193

Query: 258  LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
            + D GA+ +A  L  +  LRVL L  N I  +G  + A  L    ++  L+L+ N  G  
Sbjct: 1194 IGDAGAQVLAAHLPQS--LRVLYLWYNHIGDAGALAFAARL--PHSLEQLNLDYNKIGDA 1249

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            GA ALA  L   +SL +LHLHGN I D G +AL   L     KLA   +G N IS  GA 
Sbjct: 1250 GAQALAFHLP--RSLLKLHLHGNHISDAGAQALALHLPQSLRKLA---LGQNQISDTGAK 1304

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI--HSKG 431
              A  +     L  ++L  N+IGD GA  +A +L     ++  +L GN I   SKG
Sbjct: 1305 AFAARLP--PFLEQLDLDSNNIGDAGAGILASSLP--LKLSKFNLKGNRISDQSKG 1356



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 130/291 (44%), Gaps = 41/291 (14%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           L N +  SL +     G  G  AL + L   ++ L  L  +   +GD G++AL   L S 
Sbjct: 578 LANGSATSLEVGDKRIGLGGVGALGRALGHPHQKLALLKFNNCCLGDAGVQALAGHLPS- 636

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
              L  L +  N   A GA  +A  +   +SL  ++L  N IGD GAE +A  L Q  ++
Sbjct: 637 --TLCKLFLQKNEFGALGAKGLAANLP--QSLRELHLENNSIGDTGAEALAACLPQ--SL 690

Query: 418 TTIDLGGNNIHSKGASAIAR---------VLKDNSV---------------ITSLDLAYN 453
             ++L  N+I   GA A+A           L++N +               +  L    N
Sbjct: 691 EALNLDNNSIGDVGAQALAAHLPQSLHGLYLQNNQIGDAGAQDLAAHLPRTLRELSFFNN 750

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA AL++ L    +I TL LG  Q+G  G + +A   R   T+  L L  NG+ D
Sbjct: 751 GIGDAGALALAKHLP--QSIRTLFLGANQVGDVGVQALAA--RLPQTLRTLTLEDNGIGD 806

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            GA+ LA       + L  + L  N+I   GA A+A  L   + + V SL+
Sbjct: 807 VGAQALALCLP---QTLRELSLHTNQIGQVGAMALATRLP--QSIEVLSLD 852


>gi|290970865|ref|XP_002668286.1| predicted protein [Naegleria gruberi]
 gi|284081599|gb|EFC35542.1| predicted protein [Naegleria gruberi]
          Length = 368

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 191/385 (49%), Gaps = 64/385 (16%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F  E++  +S+D+     GDEG+  ++E     +    ++   N I   G+K+   + Q
Sbjct: 20  KFISEMKQLTSLDIYNNRIGDEGVKSISEM----KQLVSLNIYNNRIGDEGVKSIIEMKQ 75

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
               L +L++ GN IGDEGVK + ++      +  L +S   + D+ A  I+E+ +    
Sbjct: 76  ----LTSLDIGGNRIGDEGVKFISEM----KQLTSLNISENQIGDKEATFISEMKQ---- 123

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L + NN I   G  S    ++E   ++SL +  N     GA  +++     K L  L
Sbjct: 124 LTSLNIYNNRIGDEGVKS----IIEMKQLKSLDIGRNQISVEGAKFISE----MKQLVSL 175

Query: 336 HLHGNSIGDEGIRAL--MSGLSS------RKG-----------KLAVLDIGNNSISAKGA 376
           +++ N I DEG++++  M  L+S      R G           +L  LDI NN I  +GA
Sbjct: 176 NIYNNRI-DEGVKSISEMKQLTSLNIAENRIGDKEAKFISEMKQLTSLDIYNNRIGDEGA 234

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
                +I   K L  +N+Y N IGDEG + I +     + +T++D+G N I  +G   I+
Sbjct: 235 I----FISKMKQLTSLNIYNNRIGDEGVKSIIEM----KRLTSLDIGRNRIGDEGVKFIS 286

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            + +    + SLD++ N IG +G K++SE+ +      +L +   +IG  GA+ +++M R
Sbjct: 287 EMKQ----LASLDISENRIGDEGVKSISEMKQL----TSLNISENRIGDEGAKSISEMKR 338

Query: 497 YNNTISILDLRANGLRDEGAKCLAQ 521
             +    LD+  N + DEG K +++
Sbjct: 339 LKS----LDIGGNQIGDEGVKFISE 359



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 184/409 (44%), Gaps = 117/409 (28%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNS 274
           L +L +SGN IGD+  K +          E  QL+S+D+      DEG K+I+E+ +   
Sbjct: 4   LTSLIISGNQIGDKEAKFIS---------EMKQLTSLDIYNNRIGDEGVKSISEMKQ--- 51

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L + NN I   G  S+ E                                 K L  
Sbjct: 52  -LVSLNIYNNRIGDEGVKSIIEM--------------------------------KQLTS 78

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L + GN IGDEG++ +     S   +L  L+I  N I  K A  ++E     K L  +N+
Sbjct: 79  LDIGGNRIGDEGVKFI-----SEMKQLTSLNISENQIGDKEATFISE----MKQLTSLNI 129

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-------LKDNSV--- 444
           Y N IGDEG + I + +KQ   + ++D+G N I  +GA  I+ +       + +N +   
Sbjct: 130 YNNRIGDEGVKSIIE-MKQ---LKSLDIGRNQISVEGAKFISEMKQLVSLNIYNNRIDEG 185

Query: 445 ---------ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
                    +TSL++A N IG   AK +SE+ +      +L +   +IG  GA F++ M 
Sbjct: 186 VKSISEMKQLTSLNIAENRIGDKEAKFISEMKQL----TSLDIYNNRIGDEGAIFISKMK 241

Query: 496 R------YNNTI--------------SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
           +      YNN I              + LD+  N + DEG K +++      + L S+D+
Sbjct: 242 QLTSLNIYNNRIGDEGVKSIIEMKRLTSLDIGRNRIGDEGVKFISEM-----KQLASLDI 296

Query: 536 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           + N I D+G  +I++  +      +TSLN++ N +   G  ++++ K L
Sbjct: 297 SENRIGDEGVKSISEMKQ------LTSLNISENRIGDEGAKSISEMKRL 339



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 8/86 (9%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F  E++  +S+D+S    GDEG+  ++E     +    ++ + N I   G K+   + +
Sbjct: 283 KFISEMKQLASLDISENRIGDEGVKSISEM----KQLTSLNISENRIGDEGAKSISEMKR 338

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDI 241
               LK+L++ GN IGDEGVK + ++
Sbjct: 339 ----LKSLDIGGNQIGDEGVKFISEM 360


>gi|154421447|ref|XP_001583737.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121917980|gb|EAY22751.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 713

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 174/357 (48%), Gaps = 11/357 (3%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK   +    IG      + +IL  +   + +QL+   + ++GA   A+L+ N S +  +
Sbjct: 72  LKVFQMESTSIGPLASASIRNILTVHPNFKVIQLAGNSIGNKGAIEFAQLILNTSSIVSI 131

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG------GALGANALAKGLEGNKSLR 333
           +L++N I+  G  ++  A+  N TI SL+L    G      G   A AL++ L  N  L 
Sbjct: 132 DLSSNGIEDKGMAAIFNAMRRNKTIISLNLGSRPGMTRNSIGNEAAAALSQMLANNLVLS 191

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L    I  E +  + SGLS +   L  L++ NN+I ++G   +   + + + +  + 
Sbjct: 192 ELDLSMVEITVENVGTIASGLS-KNTTLCELNLSNNNIQSRGVAQILPCLVSSR-VSALR 249

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N + D+     A+  KQN+ + TID+  N + ++  + IA  +     I   +L+ N
Sbjct: 250 LSGNHLKDDCGTYFANFFKQNKNVNTIDISNNGLTARFIATIAPTITKCEAIKEFNLSKN 309

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           P+    A+  S+++  +  + +L L  C+I  +G +  A  L  N  + +L+L  N LRD
Sbjct: 310 PLTGRSAEIFSKIISANSTLKSLILQACKIDLTGIKEFALGLAQNRGLQVLNLSNNSLRD 369

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           +G   L+++F V    L  + L   E+ D    +I  AL  +E   + S+++ NN +
Sbjct: 370 DGLDSLSRAF-VSQRGLEQLFLDLTEMGDKSCDSIFTALSKSE--TIKSISIKNNLV 423



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/399 (23%), Positives = 165/399 (41%), Gaps = 39/399 (9%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           F  + ++G + G++G    A+ +    +   +  ++NGI   G+ A    ++ N  + +L
Sbjct: 100 FKVIQLAGNSIGNKGAIEFAQLILNTSSIVSIDLSSNGIEDKGMAAIFNAMRRNKTIISL 159

Query: 224 NLSGNP------IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           NL   P      IG+E    L  +L +N  +  L LS V++  E    IA  L  N+ L 
Sbjct: 160 NLGSRPGMTRNSIGNEAAAALSQMLANNLVLSELDLSMVEITVENVGTIASGLSKNTTLC 219

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            L L+NN I   G   +   L+ +S + +L L+GN+         A   + NK++     
Sbjct: 220 ELNLSNNNIQSRGVAQILPCLV-SSRVSALRLSGNHLKDDCGTYFANFFKQNKNVN---- 274

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
                                     +DI NN ++A+    +A  I  C+++   NL  N
Sbjct: 275 -------------------------TIDISNNGLTARFIATIAPTITKCEAIKEFNLSKN 309

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            +    AE  +  +  N T+ ++ L    I   G    A  L  N  +  L+L+ N +  
Sbjct: 310 PLTGRSAEIFSKIISANSTLKSLILQACKIDLTGIKEFALGLAQNRGLQVLNLSNNSLRD 369

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           DG  +LS        +  L L   ++G    + +   L  + TI  + ++ N ++D GA 
Sbjct: 370 DGLDSLSRAFVSQRGLEQLFLDLTEMGDKSCDSIFTALSKSETIKSISIKNNLVKD-GAP 428

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            L   F   N     + + +N+I       I++A+  N+
Sbjct: 429 IL--QFIQNNSKCRKLSIEYNDISYAYIQQISKAVSQNK 465



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 41/293 (13%)

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           FT     LL+   ++   +     G L + ++   L  + + + + L GNSIG+      
Sbjct: 59  FTRFERQLLDKPFLKVFQMESTSIGPLASASIRNILTVHPNFKVIQLAGNSIGN------ 112

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
                                  KGA   A+ I N  S++ I+L  N I D+G   I +A
Sbjct: 113 -----------------------KGAIEFAQLILNTSSIVSIDLSSNGIEDKGMAAIFNA 149

Query: 411 LKQNRTITTIDLGG------NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           +++N+TI +++LG       N+I ++ A+A++++L +N V++ LDL+   I  +    ++
Sbjct: 150 MRRNKTIISLNLGSRPGMTRNSIGNEAAAALSQMLANNLVLSELDLSMVEITVENVGTIA 209

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
             L  +  +  L L    I + G   +   L  ++ +S L L  N L+D+     A  FK
Sbjct: 210 SGLSKNTTLCELNLSNNNIQSRGVAQILPCL-VSSRVSALRLSGNHLKDDCGTYFANFFK 268

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 577
             N+ + +ID++ N +       IA  +   E  A+   NL+ N LT  G+SA
Sbjct: 269 -QNKNVNTIDISNNGLTARFIATIAPTITKCE--AIKEFNLSKNPLT--GRSA 316



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/236 (20%), Positives = 104/236 (44%), Gaps = 6/236 (2%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F K+ +  +++D+S        +  +A ++   +  +E + + N +T    + F  ++ +
Sbjct: 266 FFKQNKNVNTIDISNNGLTARFIATIAPTITKCEAIKEFNLSKNPLTGRSAEIFSKIISA 325

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  LK+L L    I   G+K     L  N G++ L LS+  LRD+G  +++    +   L
Sbjct: 326 NSTLKSLILQACKIDLTGIKEFALGLAQNRGLQVLNLSNNSLRDDGLDSLSRAFVSQRGL 385

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY--GGALGANALAKGLEGNKSLRE 334
             L L+   +      S+  AL ++ TI+S+ +  N    GA     + + ++ N   R+
Sbjct: 386 EQLFLDLTEMGDKSCDSIFTALSKSETIKSISIKNNLVKDGA----PILQFIQNNSKCRK 441

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           L +  N I    I+ +   +S  K +    +    +   +    +   + +C+ ++
Sbjct: 442 LSIEYNDISYAYIQQISKAVSQNKHRWQQQNESKTTSGTRSLEELENELNDCREMI 497


>gi|290973802|ref|XP_002669636.1| predicted protein [Naegleria gruberi]
 gi|284083186|gb|EFC36892.1| predicted protein [Naegleria gruberi]
          Length = 548

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 194/406 (47%), Gaps = 67/406 (16%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           ++    N I    +K     L S   LK LNL  N IG++G K +  +           L
Sbjct: 119 QLDLCRNKIKPTVVKG----LSSLTNLKKLNLGHNEIGNDGAKHVSSLT---------HL 165

Query: 254 SSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +++DL D G     A+ L + + L  L L NN I  +G   ++   L N T  +L +   
Sbjct: 166 TALDLFDNGIGPNGAQRLSSLTNLTQLNLGNNEIGDAGAEHISS--LTNLTQLNLRIT-- 221

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
               LGAN + K L G K L EL L GN IG EG+  L     S    L  L++GNN I+
Sbjct: 222 ---KLGANGV-KSLRGLKKLTELDLSGNQIGYEGVNNL-----SELKNLKKLNLGNNRIT 272

Query: 373 AKGAFHV------------AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
             GA  +            AE++   K+L  INL +N IG  GAE++ +       +T +
Sbjct: 273 GDGAERLCGLENLTELDLRAEHLSQLKNLTQINLCLNQIGPNGAERLCEL----TNLTQL 328

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           +L  N I +  A ++ ++      +T LDL YN I  DGA+ LS++ K    +  L L  
Sbjct: 329 NLRSNLIGAIKAESLCKL----ENLTQLDLGYNRIEDDGAQRLSKLKK----LTQLDLSG 380

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            QIG+ GA+ ++++      ++ LDL  NG+ D GA+ L++  K     LT + L  N I
Sbjct: 381 NQIGSIGAQSLSEL----TNLTHLDLNGNGIED-GAQHLSKLKK-----LTRLGLNDNRI 430

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 586
            DDGA  +++  K      +T L+L NN +   G   L+  K++ Y
Sbjct: 431 GDDGAKYLSELNK------LTHLSLDNNGIGDTGAECLSKLKNITY 470



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 144/336 (42%), Gaps = 78/336 (23%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           L+  + +D+SG   G EG+  L+E                             L++   L
Sbjct: 234 LKKLTELDLSGNQIGYEGVNNLSE-----------------------------LKN---L 261

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K LNL  N I  +G + LC       G+E   L+ +DLR E    +  L + N  L    
Sbjct: 262 KKLNLGNNRITGDGAERLC-------GLE--NLTELDLRAEHLSQLKNLTQINLCL---- 308

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
              N I  +G    AE L E + +  L+L  N  GA+ A +L K LE   +L +L L  N
Sbjct: 309 ---NQIGPNG----AERLCELTNLTQLNLRSNLIGAIKAESLCK-LE---NLTQLDLGYN 357

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            I D+G + L     S+  KL  LD+  N I + GA  ++E           NL   D+ 
Sbjct: 358 RIEDDGAQRL-----SKLKKLTQLDLSGNQIGSIGAQSLSE---------LTNLTHLDLN 403

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             G E  A  L + + +T + L  N I   GA  ++ + K    +T L L  N IG  GA
Sbjct: 404 GNGIEDGAQHLSKLKKLTRLGLNDNRIGDDGAKYLSELNK----LTHLSLDNNGIGDTGA 459

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           + LS++     NI  L L   +I  +G + +  ++R
Sbjct: 460 ECLSKL----KNITYLSLDDNEIETAGKKHLRKLIR 491


>gi|428177965|gb|EKX46842.1| hypothetical protein GUITHDRAFT_59521, partial [Guillardia theta
           CCMP2712]
          Length = 255

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 32/261 (12%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ALA+ +  NK+L+ L L  NSI D+G  AL + L +    L  LDI +N IS  G   +A
Sbjct: 16  ALAREIRYNKTLKLLDLSSNSISDQGASALSAVLIANS-TLESLDIASNGISQHGVACLA 74

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             +K+  SL  + L  N  GD G   +ADA+++N ++  + LG N I   GASA+++   
Sbjct: 75  AGLKHNSSLKSLELSFNGFGDSGVVFLADAVQRNSSLQYLGLGFNGILESGASALSQACL 134

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            +  +T ++L+YN                             IG  GAE ++ ML  N  
Sbjct: 135 MSKCLTKIELSYNA----------------------------IGDCGAEILSGMLERNPA 166

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           + +L L  NG+ D+GAK LA++ +  N  L  I LA NEI DDGA ++A+ L  N+  ++
Sbjct: 167 LKVLGLVCNGITDKGAKSLARALE-SNSNLKVIGLACNEITDDGAASLAEMLNHND--SL 223

Query: 561 TSLNLANNFLTKFGQSALTDA 581
             L L  N + + G + L  A
Sbjct: 224 QGLYLEENDIGEVGSALLAKA 244



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 132/236 (55%), Gaps = 1/236 (0%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           ++ N  LK L+LS N I D+G   L  +L+ N+ +E L ++S  +   G   +A  LK+N
Sbjct: 21  IRYNKTLKLLDLSSNSISDQGASALSAVLIANSTLESLDIASNGISQHGVACLAAGLKHN 80

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           S L+ LEL+ N    SG   LA+A+  NS+++ L L  N     GA+AL++    +K L 
Sbjct: 81  SSLKSLELSFNGFGDSGVVFLADAVQRNSSLQYLGLGFNGILESGASALSQACLMSKCLT 140

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           ++ L  N+IGD G   ++SG+  R   L VL +  N I+ KGA  +A  +++  +L  I 
Sbjct: 141 KIELSYNAIGDCGAE-ILSGMLERNPALKVLGLVCNGITDKGAKSLARALESNSNLKVIG 199

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           L  N+I D+GA  +A+ L  N ++  + L  N+I   G++ +A+  +  +V T ++
Sbjct: 200 LACNEITDDGAASLAEMLNHNDSLQGLYLEENDIGEVGSALLAKAHRTTTVCTPMN 255



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 127/262 (48%), Gaps = 29/262 (11%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A  ++ N  L++L+L++N I   G ++L+  L+ NST+ SL +  N     G   LA 
Sbjct: 16  ALAREIRYNKTLKLLDLSSNSISDQGASALSAVLIANSTLESLDIASNGISQHGVACLAA 75

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           GL+ N SL+ L L  N  GD G+  L   +  R   L  L +G N I   GA  +++   
Sbjct: 76  GLKHNSSLKSLELSFNGFGDSGVVFLADAVQ-RNSSLQYLGLGFNGILESGASALSQACL 134

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             K L  I L  N IGD GAE ++  L++N  +  + L  N I  KGA ++AR L+ NS 
Sbjct: 135 MSKCLTKIELSYNAIGDCGAEILSGMLERNPALKVLGLVCNGITDKGAKSLARALESNSN 194

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  + LA N I  DGA +L+E                            ML +N+++  L
Sbjct: 195 LKVIGLACNEITDDGAASLAE----------------------------MLNHNDSLQGL 226

Query: 505 DLRANGLRDEGAKCLAQSFKVV 526
            L  N + + G+  LA++ +  
Sbjct: 227 YLEENDIGEVGSALLAKAHRTT 248



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 4/238 (1%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           LA  + YN+T + +  ++N I+  G  A   VL +N  L++L+++ N I   GV CL   
Sbjct: 17  LAREIRYNKTLKLLDLSSNSISDQGASALSAVLIANSTLESLDIASNGISQHGVACLAAG 76

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N+ ++ L+LS     D G   +A+ ++ NS L+ L L  N I  SG ++L++A L +
Sbjct: 77  LKHNSSLKSLELSFNGFGDSGVVFLADAVQRNSSLQYLGLGFNGILESGASALSQACLMS 136

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +  + L+ N  G  GA  L+  LE N +L+ L L  N I D+G ++L   L S    L
Sbjct: 137 KCLTKIELSYNAIGDCGAEILSGMLERNPALKVLGLVCNGITDKGAKSLARALESNS-NL 195

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
            V+ +  N I+  GA  +AE + +  SL  + L  NDIG+ G+  +A   K +RT T 
Sbjct: 196 KVIGLACNEITDDGAASLAEMLNHNDSLQGLYLEENDIGEVGSALLA---KAHRTTTV 250



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 28/167 (16%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD------- 211
           K   +  S+++S   FGD G+ FLA+++  N + + +    NGI  +G  A         
Sbjct: 78  KHNSSLKSLELSFNGFGDSGVVFLADAVQRNSSLQYLGLGFNGILESGASALSQACLMSK 137

Query: 212 ---------------------GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER 250
                                G+L+ N ALK L L  N I D+G K L   L  N+ ++ 
Sbjct: 138 CLTKIELSYNAIGDCGAEILSGMLERNPALKVLGLVCNGITDKGAKSLARALESNSNLKV 197

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           + L+  ++ D+GA ++AE+L +N  L+ L L  N I   G   LA+A
Sbjct: 198 IGLACNEITDDGAASLAEMLNHNDSLQGLYLEENDIGEVGSALLAKA 244



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 1/135 (0%)

Query: 141 GFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN 200
           GF G +       L++     +  + +++S    GD G   L+  L  N   + +    N
Sbjct: 117 GFNG-ILESGASALSQACLMSKCLTKIELSYNAIGDCGAEILSGMLERNPALKVLGLVCN 175

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
           GIT  G K+    L+SN  LK + L+ N I D+G   L ++L  N  ++ L L   D+ +
Sbjct: 176 GITDKGAKSLARALESNSNLKVIGLACNEITDDGAASLAEMLNHNDSLQGLYLEENDIGE 235

Query: 261 EGAKAIAELLKNNSI 275
            G+  +A+  +  ++
Sbjct: 236 VGSALLAKAHRTTTV 250


>gi|403264743|ref|XP_003924632.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 471

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N T  ++    NGIT  GI +   +LQ N  L+ LN
Sbjct: 91  SYVNLNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYLQELN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D L  N + +  L+LS  D ++E A  + ++L +N  ++ L+L++
Sbjct: 151 ISNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N+    GA AL  GL GN +L +L L  N +G
Sbjct: 211 NQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+  N IS +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 271 NEGALALGEVLRLNSC-LVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPISVDG 329

Query: 404 AEKIADALKQN 414
           A  +  ++K+N
Sbjct: 330 ALLLILSIKRN 340



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L ++NN +   G   +++ L  N S+I SL L+GN      A  L + L  N  +++L
Sbjct: 147 QELNISNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L++  G L  LD+  N    +GA  +   ++   +L  ++L 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLATNVG-LTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN +G+EGA  + + L+ N  +  +D+ GN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 266 MNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 SVDGA 330



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EGI +L+  L      L  L+I
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENY-YLQELNI 151

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++++   S +W + L  ND  +E A  +   L  N  I  +DL  N
Sbjct: 152 SNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 212 QFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 272 EGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLES-NESLKVLKLFLNPISVDGA 330

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  ++K N    +  L+++N  +++
Sbjct: 331 LLLILSIKRNPKSRMEELDISNVLVSE 357



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 2/224 (0%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
           +L E  +E      +++S    G EG   +++ L  N ++   +  + N           
Sbjct: 135 SLVEMLQENYYLQELNISNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLC 194

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            VL SN  +K L+LS N   D G + L  +L  N G+  L LS       GA A+   L+
Sbjct: 195 QVLSSNYRIKKLDLSHNQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLR 254

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L+ N +   G  +L E L  NS +  L ++GN     GA+ ++KGLE N+S
Sbjct: 255 GNVTLTKLDLSMNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLESNES 314

Query: 332 LRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           L+ L L  N I  +G +  ++S   + K ++  LDI N  +S +
Sbjct: 315 LKVLKLFLNPISVDGALLLILSIKRNPKSRMEELDISNVLVSEQ 358



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 2/162 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S   F D G   L + L  N     +  + N     G  A    L+ N+ L  L+LS
Sbjct: 206 LDLSHNQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLS 265

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N +G+EG   L ++L  N+ +  L +S  D+ +EGA  I++ L++N  L+VL+L  N I
Sbjct: 266 MNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPI 325

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
              G   L  ++  N   R   L  +    L +    K L+G
Sbjct: 326 SVDGALLLILSIKRNPKSRMEEL--DISNVLVSEQFMKTLDG 365


>gi|57113991|ref|NP_001009060.1| ribonuclease inhibitor [Pan troglodytes]
 gi|397468776|ref|XP_003806047.1| PREDICTED: ribonuclease inhibitor isoform 1 [Pan paniscus]
 gi|397468778|ref|XP_003806048.1| PREDICTED: ribonuclease inhibitor isoform 2 [Pan paniscus]
 gi|397468780|ref|XP_003806049.1| PREDICTED: ribonuclease inhibitor isoform 3 [Pan paniscus]
 gi|397468782|ref|XP_003806050.1| PREDICTED: ribonuclease inhibitor isoform 4 [Pan paniscus]
 gi|397468784|ref|XP_003806051.1| PREDICTED: ribonuclease inhibitor isoform 5 [Pan paniscus]
 gi|397468786|ref|XP_003806052.1| PREDICTED: ribonuclease inhibitor isoform 6 [Pan paniscus]
 gi|397468788|ref|XP_003806053.1| PREDICTED: ribonuclease inhibitor isoform 7 [Pan paniscus]
 gi|397468790|ref|XP_003806054.1| PREDICTED: ribonuclease inhibitor isoform 8 [Pan paniscus]
 gi|38503347|sp|Q8HZP9.3|RINI_PANTR RecName: Full=Ribonuclease inhibitor; AltName:
           Full=Ribonuclease/angiogenin inhibitor 1
 gi|22901947|gb|AAN10133.1| RNase inhibitor [Pan troglodytes]
 gi|410257602|gb|JAA16768.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410257604|gb|JAA16769.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410257606|gb|JAA16770.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410257608|gb|JAA16771.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410257610|gb|JAA16772.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410305414|gb|JAA31307.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410305416|gb|JAA31308.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410305418|gb|JAA31309.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410305420|gb|JAA31310.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
          Length = 461

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 178/415 (42%), Gaps = 9/415 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSDA---RWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCKPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D G + L
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDAGVQEL 361

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            Q        L  + LA  ++ D    ++A  L AN   ++  L+L+NN L   G
Sbjct: 362 CQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANH--SLRELDLSNNCLGDAG 414



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 181/389 (46%), Gaps = 8/389 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL   +L     K +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCKPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D G  
Sbjct: 357 GVQELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 416

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDD 543
            L +S +    + E L   D+ ++E  +D
Sbjct: 417 QLVESVRQPGCLLEQLVLYDIYWSEEMED 445



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 335 SVLAQNKFLLELQISNNRLEDAGVQELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 395 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430


>gi|426366721|ref|XP_004050395.1| PREDICTED: ribonuclease inhibitor isoform 1 [Gorilla gorilla
           gorilla]
 gi|426366723|ref|XP_004050396.1| PREDICTED: ribonuclease inhibitor isoform 2 [Gorilla gorilla
           gorilla]
 gi|426366725|ref|XP_004050397.1| PREDICTED: ribonuclease inhibitor isoform 3 [Gorilla gorilla
           gorilla]
 gi|426366727|ref|XP_004050398.1| PREDICTED: ribonuclease inhibitor isoform 4 [Gorilla gorilla
           gorilla]
 gi|426366729|ref|XP_004050399.1| PREDICTED: ribonuclease inhibitor isoform 5 [Gorilla gorilla
           gorilla]
 gi|426366731|ref|XP_004050400.1| PREDICTED: ribonuclease inhibitor isoform 6 [Gorilla gorilla
           gorilla]
 gi|426366733|ref|XP_004050401.1| PREDICTED: ribonuclease inhibitor isoform 7 [Gorilla gorilla
           gorilla]
 gi|426366735|ref|XP_004050402.1| PREDICTED: ribonuclease inhibitor isoform 8 [Gorilla gorilla
           gorilla]
          Length = 461

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 179/415 (43%), Gaps = 9/415 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSDA---RWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L++   L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRSLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNRLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGIAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D G + L
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDAGVREL 361

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            Q        L  + LA  ++ D    ++A  L AN   ++  L+L+NN L   G
Sbjct: 362 CQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANH--SLRELDLSNNCLGDAG 414



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 181/389 (46%), Gaps = 8/389 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L+S   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRSLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL   +L     + +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NRLGDVGIAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D G  
Sbjct: 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 416

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDD 543
            L +S +    + E L   D+ ++E  +D
Sbjct: 417 QLVESVRQPGCLLEQLVLYDIYWSEEMED 445



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNRLGDVGIAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 335 SVLAQNKFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 395 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430


>gi|320162645|gb|EFW39544.1| hypothetical protein CAOG_00069 [Capsaspora owczarzaki ATCC 30864]
          Length = 402

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 123/227 (54%), Gaps = 4/227 (1%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L L  N IGDEG + +   L + +  L++L +  N I A GA  + E ++   SL  
Sbjct: 2   LMWLVLDCNQIGDEGAQTIAQVLEANETLLSILRLEQNQIGAAGALALGEALEVNTSLTR 61

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L+ N IGD GAE IA+AL  N+T+T + LG N I   GA AIA  L+ N+ +  L L 
Sbjct: 62  LELFDNQIGDVGAEAIAEALTVNQTLTCLTLGKNKIGIVGAQAIASALELNTTVAELHLQ 121

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           +N +G  GAK L+E LK + ++  L L   QIG  GA+ +A+ L  N T+  L+L  N +
Sbjct: 122 FNQLGNAGAKVLAEALKVNASLTELNLCDNQIGDVGAQAIAEALTVNTTLDNLNLPDNWI 181

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + G + + Q+  V N+    +D   N +    AF++   L   ED+
Sbjct: 182 SEAGVQMIEQARTVNNKTDVFMDDQINPL----AFSLYVRLATAEDI 224



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 118/195 (60%), Gaps = 4/195 (2%)

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTI-DLGGNNIHSKGASAIARVLKDNSVITS 447
           L+W+ L  N IGDEGA+ IA  L+ N T+ +I  L  N I + GA A+   L+ N+ +T 
Sbjct: 2   LMWLVLDCNQIGDEGAQTIAQVLEANETLLSILRLEQNQIGAAGALALGEALEVNTSLTR 61

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L+L  N IG  GA+A++E L  +  +  L LG  +IG  GA+ +A  L  N T++ L L+
Sbjct: 62  LELFDNQIGDVGAEAIAEALTVNQTLTCLTLGKNKIGIVGAQAIASALELNTTVAELHLQ 121

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
            N L + GAK LA++ K VN +LT ++L  N+I D GA AIA+AL  N    + +LNL +
Sbjct: 122 FNQLGNAGAKVLAEALK-VNASLTELNLCDNQIGDVGAQAIAEALTVN--TTLDNLNLPD 178

Query: 568 NFLTKFGQSALTDAK 582
           N++++ G   +  A+
Sbjct: 179 NWISEAGVQMIEQAR 193



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 89/177 (50%), Gaps = 2/177 (1%)

Query: 200 NGITAAGIKAFDGVLQSN-IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
           N I   G +    VL++N   L  L L  N IG  G   L + L  N  + RL+L    +
Sbjct: 10  NQIGDEGAQTIAQVLEANETLLSILRLEQNQIGAAGALALGEALEVNTSLTRLELFDNQI 69

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            D GA+AIAE L  N  L  L L  N I   G  ++A AL  N+T+  LHL  N  G  G
Sbjct: 70  GDVGAEAIAEALTVNQTLTCLTLGKNKIGIVGAQAIASALELNTTVAELHLQFNQLGNAG 129

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           A  LA+ L+ N SL EL+L  N IGD G +A+   L+     L  L++ +N IS  G
Sbjct: 130 AKVLAEALKVNASLTELNLCDNQIGDVGAQAIAEALTVNT-TLDNLNLPDNWISEAG 185



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 101/199 (50%), Gaps = 6/199 (3%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           L  L L  N IGDEG + +  +L  N   +  L+L    +   GA A+ E L+ N+ L  
Sbjct: 2   LMWLVLDCNQIGDEGAQTIAQVLEANETLLSILRLEQNQIGAAGALALGEALEVNTSLTR 61

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           LEL +N I   G  ++AEAL  N T+  L L  N  G +GA A+A  LE N ++ ELHL 
Sbjct: 62  LELFDNQIGDVGAEAIAEALTVNQTLTCLTLGKNKIGIVGAQAIASALELNTTVAELHLQ 121

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G+ G + L   L      L  L++ +N I   GA  +AE +    +L  +NL  N 
Sbjct: 122 FNQLGNAGAKVLAEALKV-NASLTELNLCDNQIGDVGAQAIAEALTVNTTLDNLNLPDNW 180

Query: 399 IGDEGAEKIADALKQNRTI 417
           I + G + I    +Q RT+
Sbjct: 181 ISEAGVQMI----EQARTV 195



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 67/135 (49%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + +++     GD G   +AE+L  NQT   ++   N I   G +A    L+ N  +  
Sbjct: 58  SLTRLELFDNQIGDVGAEAIAEALTVNQTLTCLTLGKNKIGIVGAQAIASALELNTTVAE 117

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  N +G+ G K L + L  NA +  L L    + D GA+AIAE L  N+ L  L L 
Sbjct: 118 LHLQFNQLGNAGAKVLAEALKVNASLTELNLCDNQIGDVGAQAIAEALTVNTTLDNLNLP 177

Query: 283 NNMIDYSGFTSLAEA 297
           +N I  +G   + +A
Sbjct: 178 DNWISEAGVQMIEQA 192



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 59/126 (46%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N I   G +A    L  N  L  L L  N IG  G + +   L  N  V  L L    L 
Sbjct: 67  NQIGDVGAEAIAEALTVNQTLTCLTLGKNKIGIVGAQAIASALELNTTVAELHLQFNQLG 126

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           + GAK +AE LK N+ L  L L +N I   G  ++AEAL  N+T+ +L+L  N+    G 
Sbjct: 127 NAGAKVLAEALKVNASLTELNLCDNQIGDVGAQAIAEALTVNTTLDNLNLPDNWISEAGV 186

Query: 320 NALAKG 325
             + + 
Sbjct: 187 QMIEQA 192


>gi|443699303|gb|ELT98859.1| hypothetical protein CAPTEDRAFT_222234 [Capitella teleta]
          Length = 773

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 136/271 (50%), Gaps = 12/271 (4%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           EVS   +G+ ++G +A   VL+ NI L+ ++LSGN I  EG   L   L +N  +  LQL
Sbjct: 304 EVSMKYHGLGSSGARAIAAVLKRNITLERVDLSGNWIEPEGGVVLAKTLQENDYITTLQL 363

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           +   L   GA    ++L  N+ LR L+L+     + G  S+   L        LH  GN 
Sbjct: 364 ADNKLGRSGAYHFCKMLLVNTTLRTLDLSGR---FKGQHSVHIDL-------PLH-TGNG 412

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G + A  LA+ +E NK L+EL L  N  G+     L   + +    L V+D+  N I  
Sbjct: 413 FGDIEAAYLAEAIEENKYLKELILSNNQFGETAGAVLGPSIGAND-VLDVIDLSWNQIRG 471

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            GA  VA+ +K    L   +L  N  G EG + IADAL  N ++  +++ GN +   GA 
Sbjct: 472 YGAVAVAKGLKENVRLKSCDLSWNGFGVEGGKAIADALATNDSLLDLNVTGNRLDIDGAH 531

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            IA+ L +N  + +L +  NPI   GA AL+
Sbjct: 532 VIAKALANNETLRTLKIGSNPISTAGAVALA 562



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 139/306 (45%), Gaps = 41/306 (13%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+AIA +LK N  L  ++L+ N I+  G   LA+ L EN  I +L L  N  G  GA  
Sbjct: 316 GARAIAAVLKRNITLERVDLSGNWIEPEGGVVLAKTLQENDYITTLQLADNKLGRSGAYH 375

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
             K L  N +LR L L G   G   +   +            L  GN     + A+ +AE
Sbjct: 376 FCKMLLVNTTLRTLDLSGRFKGQHSVHIDLP-----------LHTGNGFGDIEAAY-LAE 423

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I+  K L  + L  N  G+     +  ++  N  +  IDL  N I   GA A+A+ LK+
Sbjct: 424 AIEENKYLKELILSNNQFGETAGAVLGPSIGANDVLDVIDLSWNQIRGYGAVAVAKGLKE 483

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  + S DL++N  G +G KA                            +AD L  N+++
Sbjct: 484 NVRLKSCDLSWNGFGVEGGKA----------------------------IADALATNDSL 515

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
             L++  N L  +GA  +A++    NE L ++ +  N I   GA A+A A+  NE+  +T
Sbjct: 516 LDLNVTGNRLDIDGAHVIAKAL-ANNETLRTLKIGSNPISTAGAVALASAVNNNENCVLT 574

Query: 562 SLNLAN 567
            L+L +
Sbjct: 575 RLDLKD 580



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 116/254 (45%), Gaps = 37/254 (14%)

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--------------LWINLYMNDIGDEGA 404
           G +A+ D G++ +   G    A Y K C  L                +++  + +G  GA
Sbjct: 261 GFIAIRDDGSDDLDLNGR---ATYQKVCDELGIVPASYFIRHLDCAEVSMKYHGLGSSGA 317

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             IA  LK+N T+  +DL GN I  +G   +A+ L++N  IT+L LA N +G  GA    
Sbjct: 318 RAIAAVLKRNITLERVDLSGNWIEPEGGVVLAKTLQENDYITTLQLADNKLGRSGAYHFC 377

Query: 465 EVLKFHGNINTLKL-----GWCQI------------GASGAEFVADMLRYNNTISILDLR 507
           ++L  +  + TL L     G   +            G   A ++A+ +  N  +  L L 
Sbjct: 378 KMLLVNTTLRTLDLSGRFKGQHSVHIDLPLHTGNGFGDIEAAYLAEAIEENKYLKELILS 437

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
            N   +     L  S    N+ L  IDL++N+IR  GA A+A+ LK  E+V + S +L+ 
Sbjct: 438 NNQFGETAGAVLGPSIG-ANDVLDVIDLSWNQIRGYGAVAVAKGLK--ENVRLKSCDLSW 494

Query: 568 NFLTKFGQSALTDA 581
           N     G  A+ DA
Sbjct: 495 NGFGVEGGKAIADA 508



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 31/287 (10%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+SG     EG   LA++L  N     +  A N +  +G   F  +L  N  L+TL+LS
Sbjct: 333 VDLSGNWIEPEGGVVLAKTLQENDYITTLQLADNKLGRSGAYHFCKMLLVNTTLRTLDLS 392

Query: 227 G-----------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           G                 N  GD     L + + +N  ++ L LS+    +     +   
Sbjct: 393 GRFKGQHSVHIDLPLHTGNGFGDIEAAYLAEAIEENKYLKELILSNNQFGETAGAVLGPS 452

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           +  N +L V++L+ N I   G  ++A+ L EN  ++S  L+ N  G  G  A+A  L  N
Sbjct: 453 IGANDVLDVIDLSWNQIRGYGAVAVAKGLKENVRLKSCDLSWNGFGVEGGKAIADALATN 512

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            SL +L++ GN +  +G   +   L++ +  L  L IG+N IS  GA  +A  + N ++ 
Sbjct: 513 DSLLDLNVTGNRLDIDGAHVIAKALANNE-TLRTLKIGSNPISTAGAVALASAVNNNENC 571

Query: 390 LWINLYMNDIGDEGAE-KIADALKQNRTI------------TTIDLG 423
           +   L + D+  E    K+ D ++  +T             TT DLG
Sbjct: 572 VLTRLDLKDVPVEFEYLKLVDEIQAKKTFHSNEGTILRSGNTTKDLG 618



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 72/148 (48%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  +E +    + +S   FG+     L  S+G N   + +  + N I   G  A    
Sbjct: 421 LAEAIEENKYLKELILSNNQFGETAGAVLGPSIGANDVLDVIDLSWNQIRGYGAVAVAKG 480

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N+ LK+ +LS N  G EG K + D L  N  +  L ++   L  +GA  IA+ L NN
Sbjct: 481 LKENVRLKSCDLSWNGFGVEGGKAIADALATNDSLLDLNVTGNRLDIDGAHVIAKALANN 540

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLEN 301
             LR L++ +N I  +G  +LA A+  N
Sbjct: 541 ETLRTLKIGSNPISTAGAVALASAVNNN 568



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 3/102 (2%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           KE     S D+S   FG EG   +A++L  N +  +++   N +   G       L +N 
Sbjct: 482 KENVRLKSCDLSWNGFGVEGGKAIADALATNDSLLDLNVTGNRLDIDGAHVIAKALANNE 541

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
            L+TL +  NPI   G   L   + +N   E   L+ +DL+D
Sbjct: 542 TLRTLKIGSNPISTAGAVALASAVNNN---ENCVLTRLDLKD 580


>gi|27881632|gb|AAH43670.1| Nod1 protein [Mus musculus]
          Length = 680

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 118/225 (52%), Gaps = 7/225 (3%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G++ L    S    +L V+ +  N I+  G   + E +   K + ++ LY N I D GA 
Sbjct: 446 GVQELQPCFS----RLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAR 501

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + R +  + LG N I S+G   +A  +K+++ I  + +  N IG +GAKA +E
Sbjct: 502 YVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAE 561

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            LK H ++ TL L +  I   G + +A  L+ N T++++ L  N L DE A+C A+  + 
Sbjct: 562 ALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDEAAECFAEMLR- 620

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           VN+ L  + L  N I   G   +A+AL+ N   A+T + L  N +
Sbjct: 621 VNQTLRHLWLIQNRITAKGTAQLARALQKN--TAITEICLNGNLI 663



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 117/225 (52%), Gaps = 1/225 (0%)

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S +  + L+ N     G   L + L   K +  L L+ N I D G R +   L   +G L
Sbjct: 455 SRLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRG-L 513

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +G N I+++G   VA  +KN  S++ + ++ N IGDEGA+  A+ALK + ++TT+ 
Sbjct: 514 KHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLS 573

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I  +G  ++A+ LK N+ +T + L  N +  + A+  +E+L+ +  +  L L   
Sbjct: 574 LAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDEAAECFAEMLRVNQTLRHLWLIQN 633

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
           +I A G   +A  L+ N  I+ + L  N ++ E AK      +++
Sbjct: 634 RITAKGTAQLARALQKNTAITEICLNGNLIKPEEAKVFENEKRII 678



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 115/244 (47%), Gaps = 29/244 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK LC+ L     V  L L +  + D GA+ +A++L     L+ L
Sbjct: 457 LTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHL 516

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G   +A A+  +++I  + + GN  G  GA A A+ L+ + SL  L L  
Sbjct: 517 KLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAF 576

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  EG ++L                             A+ +K   +L  I L  N++
Sbjct: 577 NGISPEGGKSL-----------------------------AQALKQNTTLTVIWLTKNEL 607

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE  A+ L+ N+T+  + L  N I +KG + +AR L+ N+ IT + L  N I  + 
Sbjct: 608 NDEAAECFAEMLRVNQTLRHLWLIQNRITAKGTAQLARALQKNTAITEICLNGNLIKPEE 667

Query: 460 AKAL 463
           AK  
Sbjct: 668 AKVF 671



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 87/170 (51%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A+ L   +  + +    N IT+ G K     ++++ ++  + + GN IGDEG 
Sbjct: 497 DIGARYVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGA 556

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L D+  +  L L+   +  EG K++A+ LK N+ L V+ L  N ++       A
Sbjct: 557 KAFAEALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDEAAECFA 616

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T+R L L  N   A G   LA+ L+ N ++ E+ L+GN I  E
Sbjct: 617 EMLRVNQTLRHLWLIQNRITAKGTAQLARALQKNTAITEICLNGNLIKPE 666



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 86/192 (44%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + +S     D G+  L E L   +    +    N IT  G +    +L     LK L
Sbjct: 457 LTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHL 516

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N I  EG KC+   + ++  +  + +    + DEGAKA AE LK++  L  L L  
Sbjct: 517 KLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAF 576

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  SLA+AL +N+T+  + L  N      A   A+ L  N++LR L L  N I 
Sbjct: 577 NGISPEGGKSLAQALKQNTTLTVIWLTKNELNDEAAECFAEMLRVNQTLRHLWLIQNRIT 636

Query: 344 DEGIRALMSGLS 355
            +G   L   L 
Sbjct: 637 AKGTAQLARALQ 648



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 74/153 (48%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E R    + +       EG   +A ++  + +  +V    N I   G KAF   L+ + +
Sbjct: 509 ECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPS 568

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +  + L+  +L DE A+  AE+L+ N  LR L
Sbjct: 569 LTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDEAAECFAEMLRVNQTLRHL 628

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA AL +N+ I  + LNGN
Sbjct: 629 WLIQNRITAKGTAQLARALQKNTAITEICLNGN 661


>gi|290970785|ref|XP_002668255.1| predicted protein [Naegleria gruberi]
 gi|284081550|gb|EFC35511.1| predicted protein [Naegleria gruberi]
          Length = 295

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 182/341 (53%), Gaps = 55/341 (16%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           ++  +S++++  N GDEG+  ++E      T+ ++++  N I   G K    + Q    L
Sbjct: 1   MKQLTSLNINYNNIGDEGVKLISEM--KQLTSLDINY--NNIGVEGAKYISEMKQ----L 52

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD-----EGAKAIAELLKNNSI 275
            +L++S N IG EGVK +          E  QL+S+++R      EGAK I+E+ +    
Sbjct: 53  TSLDISDNNIGVEGVKLIS---------EMKQLTSLNIRINEIGVEGAKYISEMKQ---- 99

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L++N N I   G    A+ + E   + SL ++ N  G  GA  +++     K L  L
Sbjct: 100 LTSLDINCNNIGVEG----AKYISEMKQLTSLDISWNNIGVEGAKLISEM----KQLTSL 151

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           ++  N IGDEG + +     S   +L  L+I +N+I  +GA  ++E     K L  +N+ 
Sbjct: 152 NIRRNEIGDEGAKYI-----SEMKQLTSLNISDNNIGVEGAKLISE----MKQLTSLNIN 202

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N+IGDEGA+ I++ +KQ   +T++++  N I  +GA  I+ + +    +TSLD+ +N I
Sbjct: 203 WNEIGDEGAKYISE-MKQ---LTSLNISWNKIGDEGAKYISEMKQ----LTSLDINWNKI 254

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           G +GAK +SE+ +      +L +    IG  GA+++++M R
Sbjct: 255 GVEGAKLISEMKQLT----SLNINDNNIGVEGAKYLSEMKR 291



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 186/368 (50%), Gaps = 86/368 (23%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD-----EGAKAIAELLKNNS 274
           L +LN++ N IGDEGVK +          E  QL+S+D+       EGAK I+E+ +   
Sbjct: 4   LTSLNINYNNIGDEGVKLIS---------EMKQLTSLDINYNNIGVEGAKYISEMKQ--- 51

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L++++N I   G   ++E       + SL++  N  G  GA  +++     K L  
Sbjct: 52  -LTSLDISDNNIGVEGVKLISEM----KQLTSLNIRINEIGVEGAKYISEM----KQLTS 102

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L ++ N+IG EG + +     S   +L  LDI  N+I  +GA  ++E     K L  +N+
Sbjct: 103 LDINCNNIGVEGAKYI-----SEMKQLTSLDISWNNIGVEGAKLISE----MKQLTSLNI 153

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N+IGDEGA+ I++ +KQ   +T++++  NNI  +GA  I+ + +    +TSL++ +N 
Sbjct: 154 RRNEIGDEGAKYISE-MKQ---LTSLNISDNNIGVEGAKLISEMKQ----LTSLNINWNE 205

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG +GAK +SE+ +      +L + W +IG  GA+++++M                    
Sbjct: 206 IGDEGAKYISEMKQLT----SLNISWNKIGDEGAKYISEM-------------------- 241

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
                        + LTS+D+ +N+I  +GA  I++  +      +TSLN+ +N +   G
Sbjct: 242 -------------KQLTSLDINWNKIGVEGAKLISEMKQ------LTSLNINDNNIGVEG 282

Query: 575 QSALTDAK 582
              L++ K
Sbjct: 283 AKYLSEMK 290



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 152/275 (55%), Gaps = 52/275 (18%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY------- 382
           K L  L+++ N+IGDEG++     L S   +L  LDI  N+I  +GA +++E        
Sbjct: 2   KQLTSLNINYNNIGDEGVK-----LISEMKQLTSLDINYNNIGVEGAKYISEMKQLTSLD 56

Query: 383 -------------IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
                        I   K L  +N+ +N+IG EGA+ I++ +KQ   +T++D+  NNI  
Sbjct: 57  ISDNNIGVEGVKLISEMKQLTSLNIRINEIGVEGAKYISE-MKQ---LTSLDINCNNIGV 112

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           +GA  I+ + +    +TSLD+++N IG +GAK +SE+ +      +L +   +IG  GA+
Sbjct: 113 EGAKYISEMKQ----LTSLDISWNNIGVEGAKLISEMKQLT----SLNIRRNEIGDEGAK 164

Query: 490 FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
           ++++M +    ++ L++  N +  EGAK +++      + LTS+++ +NEI D+GA  I+
Sbjct: 165 YISEMKQ----LTSLNISDNNIGVEGAKLISEM-----KQLTSLNINWNEIGDEGAKYIS 215

Query: 550 QALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           +  +      +TSLN++ N +   G   +++ K L
Sbjct: 216 EMKQ------LTSLNISWNKIGDEGAKYISEMKQL 244



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 134/274 (48%), Gaps = 49/274 (17%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           ++  E++  +S+D+S  N G EG+  ++E     +    ++   N I   G K    + Q
Sbjct: 44  KYISEMKQLTSLDISDNNIGVEGVKLISEM----KQLTSLNIRINEIGVEGAKYISEMKQ 99

Query: 216 SNIALKTLNLSGNPIGDEGVKCLC--------DILVDNAGV-------ERLQLSSVDLR- 259
               L +L+++ N IG EG K +         DI  +N GV       E  QL+S+++R 
Sbjct: 100 ----LTSLDINCNNIGVEGAKYISEMKQLTSLDISWNNIGVEGAKLISEMKQLTSLNIRR 155

Query: 260 ----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
               DEGAK I+E+ +    L  L +++N I   G    A+ + E   + SL++N N  G
Sbjct: 156 NEIGDEGAKYISEMKQ----LTSLNISDNNIGVEG----AKLISEMKQLTSLNINWNEIG 207

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             GA  +++     K L  L++  N IGDEG + +     S   +L  LDI  N I  +G
Sbjct: 208 DEGAKYISEM----KQLTSLNISWNKIGDEGAKYI-----SEMKQLTSLDINWNKIGVEG 258

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           A  ++E     K L  +N+  N+IG EGA+ +++
Sbjct: 259 AKLISE----MKQLTSLNINDNNIGVEGAKYLSE 288


>gi|296215583|ref|XP_002754192.1| PREDICTED: uncharacterized protein C14orf166B [Callithrix jacchus]
          Length = 471

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMEESYMNLNHHGLGPRGTKAIAIALVSNTTVTKLELEDNGITEEGILSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++ L  N S+I SL L+GN      A  L + L  N  +++L
Sbjct: 147 QEMNISNNQLGLKGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L++  G L  LD+  N    +GA  +   ++   +L  +NL 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLATNVG-LTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLNLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN +G+EGA  + + L+ N  +  +D+ GN+I ++GAS I+R L+ N  +  L L  NPI
Sbjct: 266 MNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISRGLESNESLKVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 SVDGA 330



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EGI +L+  L      L  ++I
Sbjct: 93  MNLNHHGLGPRGTKAIAIALVSNTTVTKLELEDNGITEEGILSLVEMLQENY-YLQEMNI 151

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  KGA  ++++++   S +W + L  ND  +E A  +   L  N  I  +DL  N
Sbjct: 152 SNNQLGLKGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 212 QFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLNLSMNGLGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 272 EGALALGEVLRLNSCLVYLDVSGNDISNEGASKISRGLES-NESLKVLKLFLNPISVDGA 330

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  ++K N    +  L+++N  +++
Sbjct: 331 LLLILSIKRNPKSRMEELDISNVLVSE 357



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N T  ++    NGIT  GI +   +LQ N  L+ +N
Sbjct: 91  SYMNLNHHGLGPRGTKAIAIALVSNTTVTKLELEDNGITEEGILSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G +G + + D L  N + +  L+LS  D ++E A  + ++L +N  ++ L+L++
Sbjct: 151 ISNNQLGLKGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N+    GA AL  GL GN +L +L+L  N +G
Sbjct: 211 NQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLNLSMNGLG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+  N IS +GA  ++  +++ +SL  + L++N I  +G
Sbjct: 271 NEGALALGEVLRLNSC-LVYLDVSGNDISNEGASKISRGLESNESLKVLKLFLNPISVDG 329

Query: 404 AEKIADALKQN 414
           A  +  ++K+N
Sbjct: 330 ALLLILSIKRN 340



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 5/205 (2%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N T+T ++L  N I  +G  +
Sbjct: 77  GVVPVSYFIRNMEES-YMNLNHHGLGPRGTKAIAIALVSNTTVTKLELEDNGITEEGILS 135

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVAD 493
           +  +L++N  +  ++++ N +G  GA+ +S+ L+ +  +I +L+L         A  +  
Sbjct: 136 LVEMLQENYYLQEMNISNNQLGLKGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQ 195

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
           +L  N  I  LDL  N   D G + L Q     N  LTS+DL++N     GA A+   L+
Sbjct: 196 VLSSNYRIKKLDLSHNQFSDVGGEHLGQML-ATNVGLTSLDLSWNHFHTRGAVALCNGLR 254

Query: 554 ANEDVAVTSLNLANNFLTKFGQSAL 578
            N  V +T LNL+ N L   G  AL
Sbjct: 255 GN--VTLTKLNLSMNGLGNEGALAL 277



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 29/210 (13%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+++SG +F +E    L + L  N   +++  + N  +  G +    +L +N+ L +L+L
Sbjct: 177 SLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHNQFSDVGGEHLGQMLATNVGLTSLDL 236

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S N     G   LC+ L  N  + +L LS   L +EGA A+ E+L+ NS L  L+++ N 
Sbjct: 237 SWNHFHTRGAVALCNGLRGNVTLTKLNLSMNGLGNEGALALGEVLRLNSCLVYLDVSGND 296

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I                               GA+ +++GLE N+SL+ L L  N I  +
Sbjct: 297 ISNE----------------------------GASKISRGLESNESLKVLKLFLNPISVD 328

Query: 346 G-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +  ++S   + K ++  LDI N  +S +
Sbjct: 329 GALLLILSIKRNPKSRMEELDISNVLVSEQ 358



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 2/162 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S   F D G   L + L  N     +  + N     G  A    L+ N+ L  LNLS
Sbjct: 206 LDLSHNQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLNLS 265

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N +G+EG   L ++L  N+ +  L +S  D+ +EGA  I+  L++N  L+VL+L  N I
Sbjct: 266 MNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISRGLESNESLKVLKLFLNPI 325

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
              G   L  ++  N   R   L  +    L +    K L+G
Sbjct: 326 SVDGALLLILSIKRNPKSRMEEL--DISNVLVSEQFVKTLDG 365


>gi|320166876|gb|EFW43775.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 440

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 4/191 (2%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           LY N +G +GA  IA+A+K N ++T + L   ++   GA AIA  ++ N  +T L+L+ N
Sbjct: 31  LYDNQVGVDGALAIAEAIKVNTSLTELSLVKIDLGDAGARAIAEAIRVNRTLTELNLSRN 90

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA++L+  LK +  +  L L   Q G +G + +A+ML  N T+ ++ L  N + D
Sbjct: 91  QIGPVGAQSLAAALKVNKKVEVLFLAANQFGDAGLQEIAEMLFVNKTLEMIYLHENQIGD 150

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            GA  +A++ + VN+ L  + L+ N I D GA A  +ALK N  V   +++L+NN + K 
Sbjct: 151 AGAPAVAEALE-VNKTLKELKLSENHIGDAGAQAFGEALKVNSTV---TIDLSNNCIGKA 206

Query: 574 GQSALTDAKDL 584
           G  A+ DA+ +
Sbjct: 207 GARAMADARKV 217



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 104/188 (55%), Gaps = 2/188 (1%)

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           +N +   GA  +AE IK   SL  ++L   D+GD GA  IA+A++ NRT+T ++L  N I
Sbjct: 33  DNQVGVDGALAIAEAIKVNTSLTELSLVKIDLGDAGARAIAEAIRVNRTLTELNLSRNQI 92

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
              GA ++A  LK N  +  L LA N  G  G + ++E+L  +  +  + L   QIG +G
Sbjct: 93  GPVGAQSLAAALKVNKKVEVLFLAANQFGDAGLQEIAEMLFVNKTLEMIYLHENQIGDAG 152

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
           A  VA+ L  N T+  L L  N + D GA+   ++ K VN  +T IDL+ N I   GA A
Sbjct: 153 APAVAEALEVNKTLKELKLSENHIGDAGAQAFGEALK-VNSTVT-IDLSNNCIGKAGARA 210

Query: 548 IAQALKAN 555
           +A A K N
Sbjct: 211 MADARKVN 218



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 118/237 (49%), Gaps = 30/237 (12%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V NA  ERL L    +  +GA AIAE +K N+ L  L L    +  +G  ++AEA+  N 
Sbjct: 21  VMNAPNERLFLYDNQVGVDGALAIAEAIKVNTSLTELSLVKIDLGDAGARAIAEAIRVNR 80

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           T+  L+L+ N  G +GA +LA  L+ NK +  L L  N  GD G++              
Sbjct: 81  TLTELNLSRNQIGPVGAQSLAAALKVNKKVEVLFLAANQFGDAGLQ-------------- 126

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
                           +AE +   K+L  I L+ N IGD GA  +A+AL+ N+T+  + L
Sbjct: 127 ---------------EIAEMLFVNKTLEMIYLHENQIGDAGAPAVAEALEVNKTLKELKL 171

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
             N+I   GA A    LK NS +T +DL+ N IG  GA+A+++  K +    T  +G
Sbjct: 172 SENHIGDAGAQAFGEALKVNSTVT-IDLSNNCIGKAGARAMADARKVNPTRLTPHMG 227



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 108/232 (46%), Gaps = 30/232 (12%)

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N+    L L  N  G  GA A+A+ ++ N SL EL L    +GD G RA           
Sbjct: 23  NAPNERLFLYDNQVGVDGALAIAEAIKVNTSLTELSLVKIDLGDAGARA----------- 71

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
                             +AE I+  ++L  +NL  N IG  GA+ +A ALK N+ +  +
Sbjct: 72  ------------------IAEAIRVNRTLTELNLSRNQIGPVGAQSLAAALKVNKKVEVL 113

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L  N     G   IA +L  N  +  + L  N IG  GA A++E L+ +  +  LKL  
Sbjct: 114 FLAANQFGDAGLQEIAEMLFVNKTLEMIYLHENQIGDAGAPAVAEALEVNKTLKELKLSE 173

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
             IG +GA+   + L+ N+T++I DL  N +   GA+ +A + KV    LT 
Sbjct: 174 NHIGDAGAQAFGEALKVNSTVTI-DLSNNCIGKAGARAMADARKVNPTRLTP 224



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 1/178 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G +G   +AE++  N +  E+S     +  AG +A    ++ N  L  LNLS N IG 
Sbjct: 35  QVGVDGALAIAEAIKVNTSLTELSLVKIDLGDAGARAIAEAIRVNRTLTELNLSRNQIGP 94

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L   L  N  VE L L++    D G + IAE+L  N  L ++ L+ N I  +G  
Sbjct: 95  VGAQSLAAALKVNKKVEVLFLAANQFGDAGLQEIAEMLFVNKTLEMIYLHENQIGDAGAP 154

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           ++AEAL  N T++ L L+ N+ G  GA A  + L+ N ++  + L  N IG  G RA+
Sbjct: 155 AVAEALEVNKTLKELKLSENHIGDAGAQAFGEALKVNSTV-TIDLSNNCIGKAGARAM 211



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 2/193 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N   E +    N +   G  A    ++ N +L  L+L    +GD G + + + +  N  +
Sbjct: 23  NAPNERLFLYDNQVGVDGALAIAEAIKVNTSLTELSLVKIDLGDAGARAIAEAIRVNRTL 82

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
             L LS   +   GA+++A  LK N  + VL L  N    +G   +AE L  N T+  ++
Sbjct: 83  TELNLSRNQIGPVGAQSLAAALKVNKKVEVLFLAANQFGDAGLQEIAEMLFVNKTLEMIY 142

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N  G  GA A+A+ LE NK+L+EL L  N IGD G +A   G + +      +D+ N
Sbjct: 143 LHENQIGDAGAPAVAEALEVNKTLKELKLSENHIGDAGAQAF--GEALKVNSTVTIDLSN 200

Query: 369 NSISAKGAFHVAE 381
           N I   GA  +A+
Sbjct: 201 NCIGKAGARAMAD 213



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 89/165 (53%), Gaps = 1/165 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + GD G   +AE++  N+T  E++ + N I   G ++    L+ N  ++ L L+ N  GD
Sbjct: 63  DLGDAGARAIAEAIRVNRTLTELNLSRNQIGPVGAQSLAAALKVNKKVEVLFLAANQFGD 122

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G++ + ++L  N  +E + L    + D GA A+AE L+ N  L+ L+L+ N I  +G  
Sbjct: 123 AGLQEIAEMLFVNKTLEMIYLHENQIGDAGAPAVAEALEVNKTLKELKLSENHIGDAGAQ 182

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +  EAL  NST+ ++ L+ N  G  GA A+A   + N +    H+
Sbjct: 183 AFGEALKVNSTV-TIDLSNNCIGKAGARAMADARKVNPTRLTPHM 226



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 1/148 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  + +++S    G  G   LA +L  N+  E +  AAN    AG++    +L  N  L+
Sbjct: 80  RTLTELNLSRNQIGPVGAQSLAAALKVNKKVEVLFLAANQFGDAGLQEIAEMLFVNKTLE 139

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            + L  N IGD G   + + L  N  ++ L+LS   + D GA+A  E LK NS +  ++L
Sbjct: 140 MIYLHENQIGDAGAPAVAEALEVNKTLKELKLSENHIGDAGAQAFGEALKVNSTV-TIDL 198

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHL 309
           +NN I  +G  ++A+A   N T  + H+
Sbjct: 199 SNNCIGKAGARAMADARKVNPTRLTPHM 226


>gi|291234686|ref|XP_002737275.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 1052

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 43/313 (13%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GAKAIA  +  N    VL L +N I   G   + E L EN  ++ L+L+ N  G+ GA  
Sbjct: 22  GAKAIAATMVRNVFTSVLNLKDNDIGAEGSMYIIEMLTENVGVKILNLSENKLGSEGARL 81

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR-KGKLAVLDIGNNSISAKGAFHVA 380
           + + ++ N  L  LHL GN   +   +     L S     L  LD+ +N+ S KG     
Sbjct: 82  VCEVMDDNSYLTSLHLSGNGFRESDAKYFAELLKSEASSNLVELDLSHNNFSEKGG---- 137

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                                   E +A A+K+N+T+  +DL  N+   KGA A+ R  K
Sbjct: 138 ------------------------EWLAIAIKKNKTLKKLDLSWNHFRRKGAVALCRAFK 173

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ +T LDL++N +  DGA  ++ VLK +  +  L +G+ +I   G   + D LRYN T
Sbjct: 174 MNTTLTYLDLSWNGLADDGAVVMAYVLKKNDTLRYLDVGFNRISRIGIAKLTDALRYNTT 233

Query: 501 ISILDLRA-NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
           ++ L +R    LR              N  L  + +A N I    + A+  A++ +   +
Sbjct: 234 LNELKVRTIYVLR-------------YNTTLNELKVAGNTITHKASAAMLVAIETSSQSS 280

Query: 560 VTSLNLANNFLTK 572
           +  L+L    +T+
Sbjct: 281 INVLDLGTESVTR 293



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 131/271 (48%), Gaps = 16/271 (5%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N I A G      +L  N+ +K LNLS N +G EG + +C+++ DN+ +  L LS    R
Sbjct: 44  NDIGAEGSMYIIEMLTENVGVKILNLSENKLGSEGARLVCEVMDDNSYLTSLHLSGNGFR 103

Query: 260 DEGAKAIAELLKN--NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           +  AK  AELLK+  +S L  L+L++N     G   LA A+ +N T++ L L+ N+    
Sbjct: 104 ESDAKYFAELLKSEASSNLVELDLSHNNFSEKGGEWLAIAIKKNKTLKKLDLSWNHFRRK 163

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA AL +  + N +L  L L  N + D+G   +M+ +  +   L  LD+G N IS  G  
Sbjct: 164 GAVALCRAFKMNTTLTYLDLSWNGLADDGA-VVMAYVLKKNDTLRYLDVGFNRISRIGIA 222

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA--I 435
            + + ++   +L           +E   +    L+ N T+  + + GN I  K ++A  +
Sbjct: 223 KLTDALRYNTTL-----------NELKVRTIYVLRYNTTLNELKVAGNTITHKASAAMLV 271

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           A      S I  LDL    +  +    L E+
Sbjct: 272 AIETSSQSSINVLDLGTESVTREFVDHLEEL 302



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 140/319 (43%), Gaps = 44/319 (13%)

Query: 192 AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
           AE V     G+   G KA    +  N+    LNL  N IG EG   + ++L +N GV+ L
Sbjct: 8   AESVCLQHYGLGPLGAKAIAATMVRNVFTSVLNLKDNDIGAEGSMYIIEMLTENVGVKIL 67

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
            LS   L  EGA+ + E++ +NS L                             SLHL+G
Sbjct: 68  NLSENKLGSEGARLVCEVMDDNSYL----------------------------TSLHLSG 99

Query: 312 NYGGALGANALAKGL--EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           N      A   A+ L  E + +L EL L  N+  ++G   L   +   K  L  LD+  N
Sbjct: 100 NGFRESDAKYFAELLKSEASSNLVELDLSHNNFSEKGGEWLAIAIKKNK-TLKKLDLSWN 158

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
               KGA  +    K   +L +++L  N + D+GA  +A  LK+N T+  +D+G N I  
Sbjct: 159 HFRRKGAVALCRAFKMNTTLTYLDLSWNGLADDGAVVMAYVLKKNDTLRYLDVGFNRISR 218

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG--ASG 487
            G + +   L+ N+ +  L +               VL+++  +N LK+    I   AS 
Sbjct: 219 IGIAKLTDALRYNTTLNELKV-----------RTIYVLRYNTTLNELKVAGNTITHKASA 267

Query: 488 AEFVADMLRYNNTISILDL 506
           A  VA      ++I++LDL
Sbjct: 268 AMLVAIETSSQSSINVLDL 286



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 33/213 (15%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G  GA+ IA  + +N   + ++L  N+I ++G+  I  +L +N  +  L+L+ N +G++
Sbjct: 18  LGPLGAKAIAATMVRNVFTSVLNLKDNDIGAEGSMYIIEMLTENVGVKILNLSENKLGSE 77

Query: 459 GAKALSEVL-------KFH-----------------------GNINTLKLGWCQIGASGA 488
           GA+ + EV+         H                        N+  L L        G 
Sbjct: 78  GARLVCEVMDDNSYLTSLHLSGNGFRESDAKYFAELLKSEASSNLVELDLSHNNFSEKGG 137

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           E++A  ++ N T+  LDL  N  R +GA  L ++FK +N  LT +DL++N + DDGA  +
Sbjct: 138 EWLAIAIKKNKTLKKLDLSWNHFRRKGAVALCRAFK-MNTTLTYLDLSWNGLADDGAVVM 196

Query: 549 AQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           A  LK N+   +  L++  N +++ G + LTDA
Sbjct: 197 AYVLKKND--TLRYLDVGFNRISRIGIAKLTDA 227



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 42/246 (17%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS---------- 216
           +++S    G EG   + E +  N     +  + NG   +  K F  +L+S          
Sbjct: 67  LNLSENKLGSEGARLVCEVMDDNSYLTSLHLSGNGFRESDAKYFAELLKSEASSNLVELD 126

Query: 217 --------------------NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
                               N  LK L+LS N    +G   LC     N  +  L LS  
Sbjct: 127 LSHNNFSEKGGEWLAIAIKKNKTLKKLDLSWNHFRRKGAVALCRAFKMNTTLTYLDLSWN 186

Query: 257 DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
            L D+GA  +A +LK N  LR L++  N I   G   L +AL  N+T+  L +   Y   
Sbjct: 187 GLADDGAVVMAYVLKKNDTLRYLDVGFNRISRIGIAKLTDALRYNTTLNELKVRTIY--- 243

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL-SSRKGKLAVLDIGNNSISAKG 375
                    L  N +L EL + GN+I  +   A++  + +S +  + VLD+G  S++ + 
Sbjct: 244 --------VLRYNTTLNELKVAGNTITHKASAAMLVAIETSSQSSINVLDLGTESVTREF 295

Query: 376 AFHVAE 381
             H+ E
Sbjct: 296 VDHLEE 301



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 2/130 (1%)

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           S+ L +  +G  GAKA++  +  +   + L L    IGA G+ ++ +ML  N  + IL+L
Sbjct: 10  SVCLQHYGLGPLGAKAIAATMVRNVFTSVLNLKDNDIGAEGSMYIIEMLTENVGVKILNL 69

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
             N L  EGA+ + +     N  LTS+ L+ N  R+  A   A+ LK+     +  L+L+
Sbjct: 70  SENKLGSEGARLVCEVMD-DNSYLTSLHLSGNGFRESDAKYFAELLKSEASSNLVELDLS 128

Query: 567 -NNFLTKFGQ 575
            NNF  K G+
Sbjct: 129 HNNFSEKGGE 138


>gi|26349853|dbj|BAC38566.1| unnamed protein product [Mus musculus]
          Length = 706

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 118/225 (52%), Gaps = 7/225 (3%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G++ L    S    +L V+ +  N I+  G   + E +   K + ++ LY N I D GA 
Sbjct: 472 GVQELQPCFS----RLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAR 527

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + R +  + LG N I S+G   +A  +K+++ I  + +  N IG +GAKA +E
Sbjct: 528 YVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAE 587

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            LK H ++ TL L +  I   G + +A  L+ N T++++ L  N L DE A+C A+  + 
Sbjct: 588 ALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLR- 646

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           VN+ L  + L  N I   G   +A+AL+ N   A+T + L  N +
Sbjct: 647 VNQTLRHLWLIQNRITAKGTAQLARALQKN--TAITEICLNGNLI 689



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 117/225 (52%), Gaps = 1/225 (0%)

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S +  + L+ N     G   L + L   K +  L L+ N I D G R +   L   +G L
Sbjct: 481 SRLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRG-L 539

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +G N I+++G   VA  +KN  S++ + ++ N IGDEGA+  A+ALK + ++TT+ 
Sbjct: 540 KHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLS 599

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I  +G  ++A+ LK N+ +T + L  N +  + A+  +E+L+ +  +  L L   
Sbjct: 600 LAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQN 659

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
           +I A G   +A  L+ N  I+ + L  N ++ E AK      +++
Sbjct: 660 RITAKGTAQLARALQKNTAITEICLNGNLIKPEEAKVFENEKRII 704



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 115/244 (47%), Gaps = 29/244 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK LC+ L     V  L L +  + D GA+ +A++L     L+ L
Sbjct: 483 LTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHL 542

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G   +A A+  +++I  + + GN  G  GA A A+ L+ + SL  L L  
Sbjct: 543 KLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAF 602

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  EG ++L                             A+ +K   +L  I L  N++
Sbjct: 603 NGISPEGGKSL-----------------------------AQALKQNTTLTVIWLTKNEL 633

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE  A+ L+ N+T+  + L  N I +KG + +AR L+ N+ IT + L  N I  + 
Sbjct: 634 NDESAECFAEMLRVNQTLRHLWLIQNRITAKGTAQLARALQKNTAITEICLNGNLIKPEE 693

Query: 460 AKAL 463
           AK  
Sbjct: 694 AKVF 697



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 87/170 (51%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A+ L   +  + +    N IT+ G K     ++++ ++  + + GN IGDEG 
Sbjct: 523 DIGARYVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGA 582

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L D+  +  L L+   +  EG K++A+ LK N+ L V+ L  N ++       A
Sbjct: 583 KAFAEALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFA 642

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T+R L L  N   A G   LA+ L+ N ++ E+ L+GN I  E
Sbjct: 643 EMLRVNQTLRHLWLIQNRITAKGTAQLARALQKNTAITEICLNGNLIKPE 692



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 86/191 (45%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + + +S     D G+  L E L   +    +    N IT  G +    +L     LK L 
Sbjct: 484 TVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHLK 543

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N I  EG KC+   + ++  +  + +    + DEGAKA AE LK++  L  L L  N
Sbjct: 544 LGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAFN 603

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G  SLA+AL +N+T+  + L  N      A   A+ L  N++LR L L  N I  
Sbjct: 604 GISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQNRITA 663

Query: 345 EGIRALMSGLS 355
           +G   L   L 
Sbjct: 664 KGTAQLARALQ 674



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 74/153 (48%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E R    + +       EG   +A ++  + +  +V    N I   G KAF   L+ + +
Sbjct: 535 ECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPS 594

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +  + L+  +L DE A+  AE+L+ N  LR L
Sbjct: 595 LTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHL 654

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA AL +N+ I  + LNGN
Sbjct: 655 WLIQNRITAKGTAQLARALQKNTAITEICLNGN 687


>gi|326431433|gb|EGD77003.1| hypothetical protein PTSG_12575 [Salpingoeca sp. ATCC 50818]
          Length = 1165

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 115/216 (53%), Gaps = 19/216 (8%)

Query: 342 IGDEGI-RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           +GDE + R  +  +S +  +  +L I NN+  +K                 +NL  ND+G
Sbjct: 345 VGDETLFRECLQRVSGKNARNKILSIWNNTCGSK-----------------VNLADNDLG 387

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            EG + I +ALK N T+T++DL  NN+  +G  AI   LK N+ +TSLDL  N +G +G 
Sbjct: 388 PEGGKAIGEALKVNTTLTSLDLYSNNLRPEGGKAIGEALKVNTTLTSLDLDGNDLGPEGG 447

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
           KA+ E LK +  + +L L    +G  G + + + L+ N T++ L+L  N L  EG K + 
Sbjct: 448 KAIGEALKVNTTLTSLSLRVNDLGPEGGKAIGEALKVNTTLTSLNLDRNDLGPEGGKAIG 507

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           ++ K VN  LTS+ +  N I      +I  A++ N+
Sbjct: 508 EALK-VNTTLTSLYIDSNSISGRLESSIKSAVERNK 542



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 4/180 (2%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++  + G EG   + E+L  N T   +   +N +   G KA    L+ N  L +L+
Sbjct: 377 SKVNLADNDLGPEGGKAIGEALKVNTTLTSLDLYSNNLRPEGGKAIGEALKVNTTLTSLD 436

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L GN +G EG K + + L  N  +  L L   DL  EG KAI E LK N+ L  L L+ N
Sbjct: 437 LDGNDLGPEGGKAIGEALKVNTTLTSLSLRVNDLGPEGGKAIGEALKVNTTLTSLNLDRN 496

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGN-YGGALGA---NALAKGLEGNKSLRELHLHGN 340
            +   G  ++ EAL  N+T+ SL+++ N   G L +   +A+ +  +  K L+ L  HG+
Sbjct: 497 DLGPEGGKAIGEALKVNTTLTSLYIDSNSISGRLESSIKSAVERNKQRQKELKALLEHGS 556



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 4/202 (1%)

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           S+  N    +V+ A N +   G KA    L+ N  L +L+L  N +  EG K + + L  
Sbjct: 369 SIWNNTCGSKVNLADNDLGPEGGKAIGEALKVNTTLTSLDLYSNNLRPEGGKAIGEALKV 428

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  +  L L   DL  EG KAI E LK N+ L  L L  N +   G  ++ EAL  N+T+
Sbjct: 429 NTTLTSLDLDGNDLGPEGGKAIGEALKVNTTLTSLSLRVNDLGPEGGKAIGEALKVNTTL 488

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG---DEGIRALMSGLSSRKGKL 361
            SL+L+ N  G  G  A+ + L+ N +L  L++  NSI    +  I++ +     R+ +L
Sbjct: 489 TSLNLDRNDLGPEGGKAIGEALKVNTTLTSLYIDSNSISGRLESSIKSAVERNKQRQKEL 548

Query: 362 -AVLDIGNNSISAKGAFHVAEY 382
            A+L+ G+  +S    F    Y
Sbjct: 549 KALLEHGSVPLSTAKVFVCGHY 570



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 3/141 (2%)

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
           +N+  + ++LA N +G +G KA+ E LK +  + +L L    +   G + + + L+ N T
Sbjct: 372 NNTCGSKVNLADNDLGPEGGKAIGEALKVNTTLTSLDLYSNNLRPEGGKAIGEALKVNTT 431

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           ++ LDL  N L  EG K + ++ KV N  LTS+ L  N++  +G  AI +ALK N    +
Sbjct: 432 LTSLDLDGNDLGPEGGKAIGEALKV-NTTLTSLSLRVNDLGPEGGKAIGEALKVN--TTL 488

Query: 561 TSLNLANNFLTKFGQSALTDA 581
           TSLNL  N L   G  A+ +A
Sbjct: 489 TSLNLDRNDLGPEGGKAIGEA 509



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 3/173 (1%)

Query: 129 NWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGY 188
           N + G+  NL     G    E  + + E  K     +S+D+   N   EG   + E+L  
Sbjct: 372 NNTCGSKVNLADNDLGP---EGGKAIGEALKVNTTLTSLDLYSNNLRPEGGKAIGEALKV 428

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N T   +    N +   G KA    L+ N  L +L+L  N +G EG K + + L  N  +
Sbjct: 429 NTTLTSLDLDGNDLGPEGGKAIGEALKVNTTLTSLSLRVNDLGPEGGKAIGEALKVNTTL 488

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
             L L   DL  EG KAI E LK N+ L  L +++N I     +S+  A+  N
Sbjct: 489 TSLNLDRNDLGPEGGKAIGEALKVNTTLTSLYIDSNSISGRLESSIKSAVERN 541



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 497 YNNTI-SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           +NNT  S ++L  N L  EG K + ++ KV N  LTS+DL  N +R +G  AI +ALK N
Sbjct: 371 WNNTCGSKVNLADNDLGPEGGKAIGEALKV-NTTLTSLDLYSNNLRPEGGKAIGEALKVN 429

Query: 556 EDVAVTSLNLANNFLTKFGQSALTDA 581
               +TSL+L  N L   G  A+ +A
Sbjct: 430 --TTLTSLDLDGNDLGPEGGKAIGEA 453


>gi|410962749|ref|XP_003987931.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C14orf166B
           homolog [Felis catus]
          Length = 586

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 136/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N S+  L L  N I +EG  +L+  L      L  L+I
Sbjct: 208 VNLNHHGLGPSGTKAIAIALVSNTSVVTLELADNCIMEEGTLSLVQMLQENY-YLQDLNI 266

Query: 367 GNNSISAKGAFHVAEYI-KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  KGA  ++E++ +N  SLL + L  N+  DE AE    A   N  I T+DL  N
Sbjct: 267 SNNDLGLKGASTISEFLQRNTSSLLNLQLSGNNFKDESAELFCQAFSANYRIKTLDLSHN 326

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               KG   + ++L  N  + SLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 327 EFSDKGGEHLGQMLALNIGLQSLDLSWNQFHTRGAVALCNGLRANVTLQKLDLSMNGFGN 386

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + ++LR NN++  +D+ +N + +EG   +++  +  NE+L  + L  N +  DGA
Sbjct: 387 EGATALGEVLRLNNSLVYIDVSSNDISNEGVIKISKGLE-FNESLKVLKLFLNPVSMDGA 445

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  ++K N    +  ++++N  +++
Sbjct: 446 TLLLLSIKRNPKSKMEEIDISNVLVSE 472



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 126/248 (50%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V  L+L+   + +EG  ++ ++L+ N  L
Sbjct: 202 NMEESYVNLNHHGLGPSGTKAIAIALVSNTSVVTLELADNCIMEEGTLSLVQMLQENYYL 261

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L ++NN +   G ++++E L  N S++ +L L+GN      A    +    N  ++ L
Sbjct: 262 QDLNISNNDLGLKGASTISEFLQRNTSSLLNLQLSGNNFKDESAELFCQAFSANYRIKTL 321

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D+G   L   L+   G L  LD+  N    +GA  +   ++   +L  ++L 
Sbjct: 322 DLSHNEFSDKGGEHLGQMLALNIG-LQSLDLSWNQFHTRGAVALCNGLRANVTLQKLDLS 380

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+EGA  + + L+ N ++  ID+  N+I ++G   I++ L+ N  +  L L  NP+
Sbjct: 381 MNGFGNEGATALGEVLRLNNSLVYIDVSSNDISNEGVIKISKGLEFNESLKVLKLFLNPV 440

Query: 456 GADGAKAL 463
             DGA  L
Sbjct: 441 SMDGATLL 448



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N +   +  A N I   G  +   +LQ N  L+ LN
Sbjct: 206 SYVNLNHHGLGPSGTKAIAIALVSNTSVVTLELADNCIMEEGTLSLVQMLQENYYLQDLN 265

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G +G   + + L  N + +  LQLS  + +DE A+   +    N  ++ L+L++
Sbjct: 266 ISNNDLGLKGASTISEFLQRNTSSLLNLQLSGNNFKDESAELFCQAFSANYRIKTLDLSH 325

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  ++SL L+ N     GA AL  GL  N +L++L L  N  G
Sbjct: 326 NEFSDKGGEHLGQMLALNIGLQSLDLSWNQFHTRGAVALCNGLRANVTLQKLDLSMNGFG 385

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  +D+ +N IS +G   +++ ++  +SL  + L++N +  +G
Sbjct: 386 NEGATALGEVL-RLNNSLVYIDVSSNDISNEGVIKISKGLEFNESLKVLKLFLNPVSMDG 444

Query: 404 AEKIADALKQN 414
           A  +  ++K+N
Sbjct: 445 ATLLLLSIKRN 455



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE-EVSFAANGITA 204
           +  E   +L +  +E      +++S  + G +G   ++E L  N ++   +  + N    
Sbjct: 243 IMEEGTLSLVQMLQENYYLQDLNISNNDLGLKGASTISEFLQRNTSSLLNLQLSGNNFKD 302

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
              + F     +N  +KTL+LS N   D+G + L  +L  N G++ L LS       GA 
Sbjct: 303 ESAELFCQAFSANYRIKTLDLSHNEFSDKGGEHLGQMLALNIGLQSLDLSWNQFHTRGAV 362

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L+ L+L+ N     G T+L E L  N+++  + ++ N     G   ++K
Sbjct: 363 ALCNGLRANVTLQKLDLSMNGFGNEGATALGEVLRLNNSLVYIDVSSNDISNEGVIKISK 422

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLS-SRKGKLAVLDIGNNSISAK 374
           GLE N+SL+ L L  N +  +G   L+  +  + K K+  +DI N  +S +
Sbjct: 423 GLEFNESLKVLKLFLNPVSMDGATLLLLSIKRNPKSKMEEIDISNVLVSEQ 473


>gi|299066813|emb|CBJ38007.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
           solanacearum CMR15]
          Length = 457

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/338 (32%), Positives = 165/338 (48%), Gaps = 73/338 (21%)

Query: 246 AGVERLQLSSVDLRDE--GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           A + RL L  +++R++  GAK  A LL N+  L  L ++NN I   G    A+AL  N  
Sbjct: 83  AHLSRLPLVRLNVRNKRIGAKG-ARLLANHPTLTSLNVSNNRIGPEG----AQALAGNMR 137

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           + +L+++GN  G   A ALA     N++LR L +  N IGDEG R L +       +L  
Sbjct: 138 LTTLNVSGNRLGVEEAKALA----ANQTLRSLDVSDNRIGDEGARVLAACT-----QLTT 188

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA--------------- 408
           LD   N I   GA  +A     C +L  + +  N IGD G   +A               
Sbjct: 189 LDANRNGIGVDGATALAA----CPTLRSLGIGGNAIGDAGVLALAANARLTTLNVESTGV 244

Query: 409 -----DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
                 AL  ++ +T + L GN I + GA+A+A   +    +T+L LA N IGA+GA+AL
Sbjct: 245 GAVGVGALAASKALTWLRLDGNGIGNAGATALAASTR----LTTLHLARNKIGAEGAQAL 300

Query: 464 SEVLKFHGNINTLKLGWCQIGASG-------AEFVADMLRYNN-------------TISI 503
           +   K      TL LG+ +IG +G       A  V+  +R N+             T++ 
Sbjct: 301 AANTKL----TTLDLGYNKIGDTGVRALAANATLVSLTVRRNDLKDESAVILAASRTLTT 356

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           LDL  NG+ D+GAK LA      N  LT++D++ N+I+
Sbjct: 357 LDLSGNGIEDQGAKALA-----ANPTLTTLDVSSNDIK 389



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 142/329 (43%), Gaps = 73/329 (22%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++  +  G +G   LA     + T   ++ + N I   G +A  G    N+ L TLN+S
Sbjct: 93  LNVRNKRIGAKGARLLAN----HPTLTSLNVSNNRIGPEGAQALAG----NMRLTTLNVS 144

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +G E  K L      N  +  L +S   + DEGA+ +A   +    L  L+ N N I
Sbjct: 145 GNRLGVEEAKALAA----NQTLRSLDVSDNRIGDEGARVLAACTQ----LTTLDANRNGI 196

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK--------------------GL 326
              G T+LA       T+RSL + GN  G  G  ALA                      L
Sbjct: 197 GVDGATALAAC----PTLRSLGIGGNAIGDAGVLALAANARLTTLNVESTGVGAVGVGAL 252

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             +K+L  L L GN IG+ G  AL +       +L  L +  N I A+GA  +A   K  
Sbjct: 253 AASKALTWLRLDGNGIGNAGATALAA-----STRLTTLHLARNKIGAEGAQALAANTK-- 305

Query: 387 KSLLWINLYMNDIGDEGAEKIAD--------------------ALKQNRTITTIDLGGNN 426
             L  ++L  N IGD G   +A                      L  +RT+TT+DL GN 
Sbjct: 306 --LTTLDLGYNKIGDTGVRALAANATLVSLTVRRNDLKDESAVILAASRTLTTLDLSGNG 363

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPI 455
           I  +GA A+A     N  +T+LD++ N I
Sbjct: 364 IEDQGAKALA----ANPTLTTLDVSSNDI 388



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 32/216 (14%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I+A G  H++        L+ +N+    IG +GA  +A+    + T+T++++  N I  +
Sbjct: 77  ITAAGMAHLSRL-----PLVRLNVRNKRIGAKGARLLAN----HPTLTSLNVSNNRIGPE 127

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA A+A     N  +T+L+++ N +G + AKAL+     +  + +L +   +IG  GA  
Sbjct: 128 GAQALA----GNMRLTTLNVSGNRLGVEEAKALAA----NQTLRSLDVSDNRIGDEGARV 179

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           +A   +    ++ LD   NG+  +GA  LA         L S+ +  N I D G  A+A 
Sbjct: 180 LAACTQ----LTTLDANRNGIGVDGATALAAC-----PTLRSLGIGGNAIGDAGVLALAA 230

Query: 551 ALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 586
                 +  +T+LN+ +  +   G  AL  +K L +
Sbjct: 231 ------NARLTTLNVESTGVGAVGVGALAASKALTW 260


>gi|20467211|gb|AAM22459.1| CARD15-like protein [Homo sapiens]
          Length = 223

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 113/204 (55%), Gaps = 2/204 (0%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L GNSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L  
Sbjct: 1   LRGNSIGPQGAKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQK 59

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IG  GA+++ADALKQNR++  +    N+I   GA A+A  LK N  + SLDL  N I 
Sbjct: 60  NSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSIS 119

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G  AL   L  +  + +L L    I   GA+ +A  L  N+T+  LDL AN L D+GA
Sbjct: 120 DAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGA 179

Query: 517 KCLAQSFKVVNEALTSIDLAFNEI 540
           + +A + +  N  LTS+ L +N I
Sbjct: 180 RAIAVAVR-ENRTLTSLHLQWNFI 202



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 113/202 (55%), Gaps = 3/202 (1%)

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           NSI  +GA  +A+ +K  ++L  ++L  N + D+GA  +A+AL  NRT++ + L  N+I 
Sbjct: 4   NSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIG 63

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA  +A  LK N  +  L  + N IG  GAKAL+E LK +  + +L L    I  +G 
Sbjct: 64  PMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGV 123

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
             +   L  N T+  L LR N +  EGA+ +A +    N  L ++DL  N + D GA AI
Sbjct: 124 AALMGALCTNQTLLSLSLRENSISPEGAQAIAHAL-CANSTLKNLDLTANLLHDQGARAI 182

Query: 549 AQALKANEDVAVTSLNLANNFL 570
           A A++  E+  +TSL+L  NF+
Sbjct: 183 AVAVR--ENRTLTSLHLQWNFI 202



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 94/182 (51%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G + G +G   LA++L  N+T   +S   N +   G ++    L SN  L  L+L  N
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKN 60

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG  G + + D L  N  ++ L  SS  + D GAKA+AE LK N  L  L+L +N I  
Sbjct: 61  SIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISD 120

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  +L  AL  N T+ SL L  N     GA A+A  L  N +L+ L L  N + D+G R
Sbjct: 121 AGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGAR 180

Query: 349 AL 350
           A+
Sbjct: 181 AI 182



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 88/181 (48%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  +S+ + G    D+G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 22  RTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLK 81

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L  S N IGD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 82  ELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSL 141

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G  ++A AL  NST+++L L  N     GA A+A  +  N++L  LHL  N 
Sbjct: 142 RENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNF 201

Query: 342 I 342
           I
Sbjct: 202 I 202


>gi|255559446|ref|XP_002520743.1| leucine rich repeat-containing protein, putative [Ricinus communis]
 gi|223540128|gb|EEF41705.1| leucine rich repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 158/317 (49%), Gaps = 31/317 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L+ LNLS N +G++GV+    +L     +E L L +  + +E A+A+ EL+ +   L+VL
Sbjct: 217 LRCLNLSNNALGEKGVRAFGALLKSQNNLEELYLINDGISEEAARAVCELVPSTEKLKVL 276

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           + +NNM    G  ++AE +  ++ +     +    G  G  ALA+ L     LR+L L  
Sbjct: 277 QFHNNMTGDEGAVAIAEFVKRSAMLEDFRCSSTRIGLDGGVALAEALGTCTHLRKLDLRD 336

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E   AL                      +K  F  A+  +     ++++ Y+N +
Sbjct: 337 NMFGVEAGVAL----------------------SKALFSFADLTE-----VYLS-YLN-L 367

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGAE +ADALK++  ++  +D+ GN+  +K AS++A  +     ++ L+LA N +  +
Sbjct: 368 EDEGAEALADALKESAPSLEVLDMAGNDFTAKAASSLAPCIAAKQFLSKLNLAENELKDE 427

Query: 459 GAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           GA  +++ ++  HG +N + LG  QI  +GA  +A  +       +L++  N + DEG  
Sbjct: 428 GAILIAKAIEGGHGQLNEVDLGTNQIRRAGARLLAQAVVLKPGFKLLNINGNFISDEGID 487

Query: 518 CLAQSFKVVNEALTSID 534
            +   FK +   L  +D
Sbjct: 488 EVKDIFKNLPGVLGPLD 504



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 136/275 (49%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I +E  + +C+++     ++ LQ  
Sbjct: 220 LNLSNNALGEKGVRAFGALLKSQNNLEELYLINDGISEEAARAVCELVPSTEKLKVLQFH 279

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE +K +++L     ++  I   G  +LAEAL   + +R L L  N  
Sbjct: 280 NNMTGDEGAVAIAEFVKRSAMLEDFRCSSTRIGLDGGVALAEALGTCTHLRKLDLRDNMF 339

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L     L E++L   ++ DEG  AL   L      L VLD+  N  +AK
Sbjct: 340 GVEAGVALSKALFSFADLTEVYLSYLNLEDEGAEALADALKESAPSLEVLDMAGNDFTAK 399

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGAS 433
            A  +A  I   + L  +NL  N++ DEGA  IA A++     +  +DLG N I   GA 
Sbjct: 400 AASSLAPCIAAKQFLSKLNLAENELKDEGAILIAKAIEGGHGQLNEVDLGTNQIRRAGAR 459

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            +A+ +        L++  N I  +G   + ++ K
Sbjct: 460 LLAQAVVLKPGFKLLNINGNFISDEGIDEVKDIFK 494



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 137/283 (48%), Gaps = 4/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE   +R L+L+ N  G  G  A    L+   +L EL+L  + I +E  RA+   + S +
Sbjct: 212 LEGCNLRCLNLSNNALGEKGVRAFGALLKSQNNLEELYLINDGISEEAARAVCELVPSTE 271

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE++K    L         IG +G   +A+AL     + 
Sbjct: 272 -KLKVLQFHNNMTGDEGAVAIAEFVKRSAMLEDFRCSSTRIGLDGGVALAEALGTCTHLR 330

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +   A+++ L   + +T + L+Y  +  +GA+AL++ LK    ++  L 
Sbjct: 331 KLDLRDNMFGVEAGVALSKALFSFADLTEVYLSYLNLEDEGAEALADALKESAPSLEVLD 390

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +      A  A  +A  +     +S L+L  N L+DEGA  +A++ +  +  L  +DL  
Sbjct: 391 MAGNDFTAKAASSLAPCIAAKQFLSKLNLAENELKDEGAILIAKAIEGGHGQLNEVDLGT 450

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N+IR  GA  +AQA+       +  LN+  NF++  G   + D
Sbjct: 451 NQIRRAGARLLAQAVVLKPGFKL--LNINGNFISDEGIDEVKD 491



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 132/263 (50%), Gaps = 5/263 (1%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG  +LR L+L  N++G++G+RA  + L S +  L  L + N+ IS + A  V
Sbjct: 206 NIFSTALEGC-NLRCLNLSNNALGEKGVRAFGALLKS-QNNLEELYLINDGISEEAARAV 263

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  +  + N  GDEGA  IA+ +K++  +         I   G  A+A  L
Sbjct: 264 CELVPSTEKLKVLQFHNNMTGDEGAVAIAEFVKRSAMLEDFRCSSTRIGLDGGVALAEAL 323

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              + +  LDL  N  G +   ALS+ L    ++  + L +  +   GAE +AD L+ + 
Sbjct: 324 GTCTHLRKLDLRDNMFGVEAGVALSKALFSFADLTEVYLSYLNLEDEGAEALADALKESA 383

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++ +LD+  N    + A  LA       + L+ ++LA NE++D+GA  IA+A++     
Sbjct: 384 PSLEVLDMAGNDFTAKAASSLAPCI-AAKQFLSKLNLAENELKDEGAILIAKAIEGGHG- 441

Query: 559 AVTSLNLANNFLTKFGQSALTDA 581
            +  ++L  N + + G   L  A
Sbjct: 442 QLNEVDLGTNQIRRAGARLLAQA 464


>gi|33563305|ref|NP_766317.1| nucleotide-binding oligomerization domain-containing protein 1 [Mus
           musculus]
 gi|283806725|ref|NP_001164478.1| nucleotide-binding oligomerization domain-containing protein 1 [Mus
           musculus]
 gi|29427688|sp|Q8BHB0.1|NOD1_MOUSE RecName: Full=Nucleotide-binding oligomerization domain-containing
           protein 1; AltName: Full=Caspase recruitment
           domain-containing protein 4
 gi|26354627|dbj|BAC40940.1| unnamed protein product [Mus musculus]
 gi|27503683|gb|AAH42670.1| Nucleotide-binding oligomerization domain containing 1 [Mus
           musculus]
 gi|37196420|gb|AAN52479.1| NOD1 [Mus musculus]
 gi|74215756|dbj|BAE23420.1| unnamed protein product [Mus musculus]
 gi|148666297|gb|EDK98713.1| caspase recruitment domain 4 [Mus musculus]
          Length = 953

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 118/225 (52%), Gaps = 7/225 (3%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G++ L    S    +L V+ +  N I+  G   + E +   K + ++ LY N I D GA 
Sbjct: 719 GVQELQPCFS----RLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + R +  + LG N I S+G   +A  +K+++ I  + +  N IG +GAKA +E
Sbjct: 775 YVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            LK H ++ TL L +  I   G + +A  L+ N T++++ L  N L DE A+C A+  + 
Sbjct: 835 ALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLR- 893

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           VN+ L  + L  N I   G   +A+AL+ N   A+T + L  N +
Sbjct: 894 VNQTLRHLWLIQNRITAKGTAQLARALQKN--TAITEICLNGNLI 936



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 117/225 (52%), Gaps = 1/225 (0%)

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S +  + L+ N     G   L + L   K +  L L+ N I D G R +   L   +G L
Sbjct: 728 SRLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRG-L 786

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +G N I+++G   VA  +KN  S++ + ++ N IGDEGA+  A+ALK + ++TT+ 
Sbjct: 787 KHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLS 846

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I  +G  ++A+ LK N+ +T + L  N +  + A+  +E+L+ +  +  L L   
Sbjct: 847 LAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQN 906

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
           +I A G   +A  L+ N  I+ + L  N ++ E AK      +++
Sbjct: 907 RITAKGTAQLARALQKNTAITEICLNGNLIKPEEAKVFENEKRII 951



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 115/244 (47%), Gaps = 29/244 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK LC+ L     V  L L +  + D GA+ +A++L     L+ L
Sbjct: 730 LTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G   +A A+  +++I  + + GN  G  GA A A+ L+ + SL  L L  
Sbjct: 790 KLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAF 849

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  EG ++L                             A+ +K   +L  I L  N++
Sbjct: 850 NGISPEGGKSL-----------------------------AQALKQNTTLTVIWLTKNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE  A+ L+ N+T+  + L  N I +KG + +AR L+ N+ IT + L  N I  + 
Sbjct: 881 NDESAECFAEMLRVNQTLRHLWLIQNRITAKGTAQLARALQKNTAITEICLNGNLIKPEE 940

Query: 460 AKAL 463
           AK  
Sbjct: 941 AKVF 944



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 3/191 (1%)

Query: 158 AKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
            +EL  +  V   G       D G  ++A+ L   +  + +    N IT+ G K     +
Sbjct: 749 CEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHLKLGKNRITSEGGKCVALAV 808

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           +++ ++  + + GN IGDEG K   + L D+  +  L L+   +  EG K++A+ LK N+
Sbjct: 809 KNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNT 868

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L V+ L  N ++       AE L  N T+R L L  N   A G   LA+ L+ N ++ E
Sbjct: 869 TLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQNRITAKGTAQLARALQKNTAITE 928

Query: 335 LHLHGNSIGDE 345
           + L+GN I  E
Sbjct: 929 ICLNGNLIKPE 939



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 86/191 (45%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + + +S     D G+  L E L   +    +    N IT  G +    +L     LK L 
Sbjct: 731 TVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHLK 790

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L  N I  EG KC+   + ++  +  + +    + DEGAKA AE LK++  L  L L  N
Sbjct: 791 LGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAFN 850

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G  SLA+AL +N+T+  + L  N      A   A+ L  N++LR L L  N I  
Sbjct: 851 GISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQNRITA 910

Query: 345 EGIRALMSGLS 355
           +G   L   L 
Sbjct: 911 KGTAQLARALQ 921


>gi|355751824|gb|EHH55944.1| Ribonuclease/angiogenin inhibitor 1 [Macaca fascicularis]
          Length = 456

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 185/396 (46%), Gaps = 8/396 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + + +     GD G+  + + L       +++S     +T AG     G L+S   L+
Sbjct: 52  ALTELSLRSNELGDAGVHCVLQGLQSPSCKIQKLSLQNCYLTGAGCGVLSGTLRSLPTLQ 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL   +L     + +A +L+     + L 
Sbjct: 112 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELT 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 172 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGITSNNCRDLCSIVASKASLRELALGS 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL      L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 232 NKLGDMGIAELCPGLLHPSSSLRTLWIWECGITAKGCADLCRVLRTKESLKELSLAGNEL 291

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +G  
Sbjct: 292 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLTQNKFLLELQISNNRLGDA 351

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++   L LG C +  S    +A  L  N+++  LDL  N L D G  
Sbjct: 352 GVQELCKGLGQPGSVLRVLWLGDCDMSDSSCSSLAATLLANHSLRELDLSNNCLGDAGVL 411

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDDGAFAIAQ 550
            L +S +    + E L   D+ ++E  +D   A+ +
Sbjct: 412 QLVESVRQPGCLLEQLVLYDIYWSEAMEDRLQALEE 447



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 177/403 (43%), Gaps = 6/403 (1%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L   Q  + V     G+T A        L+ N AL  L+L  N +GD GV C+   L
Sbjct: 16  AELLPLLQQCQVVRLDDCGLTEARCGDISSALRVNPALTELSLRSNELGDAGVHCVLQGL 75

Query: 243 VD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
              +  +++L L +  L   G   ++  L++   L+ L L++N++  +G   L E LL+ 
Sbjct: 76  QSPSCKIQKLSLQNCYLTGAGCGVLSGTLRSLPTLQELHLSDNLLGDAGLQLLCEGLLDP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL +  N I + G+R L  GL     +
Sbjct: 136 QCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQ 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITT 419
           L  L + +  I++     +   + +  SL  + L  N +GD G AE     L  + ++ T
Sbjct: 196 LEALKLESCGITSNNCRDLCSIVASKASLRELALGSNKLGDMGIAELCPGLLHPSSSLRT 255

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + +    I +KG + + RVL+    +  L LA N +G +GA+ L E L   G  + +L +
Sbjct: 256 LWIWECGITAKGCADLCRVLRTKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 315

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
             C   A+     + +L  N  +  L +  N L D G + L +        L  + L   
Sbjct: 316 KSCSFTAACCSHFSSVLTQNKFLLELQISNNRLGDAGVQELCKGLGQPGSVLRVLWLGDC 375

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           ++ D    ++A  L AN   ++  L+L+NN L   G   L ++
Sbjct: 376 DMSDSSCSSLAATLLANH--SLRELDLSNNCLGDAGVLQLVES 416



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 109/270 (40%), Gaps = 44/270 (16%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  ++   +     GITA G  
Sbjct: 220 SKASLRELA----------LGSNKLGDMGIAELCPGLLHPSSSLRTLWIWECGITAKGCA 269

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIA 267
               VL++  +LK L+L+GN +GDEG + LC+ L++    +E L + S           +
Sbjct: 270 DLCRVLRTKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 329

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGL 326
            +L  N  L  L+++NN +  +G   L + L +  S +R L L          ++LA  L
Sbjct: 330 SVLTQNKFLLELQISNNRLGDAGVQELCKGLGQPGSVLRVLWLGDCDMSDSSCSSLAATL 389

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             N SLREL                             D+ NN +   G   + E ++  
Sbjct: 390 LANHSLREL-----------------------------DLSNNCLGDAGVLQLVESVRQP 420

Query: 387 KSLLWINLYMNDI-GDEGAEKIADALKQNR 415
             LL   L + DI   E  E    AL++ +
Sbjct: 421 GCLL-EQLVLYDIYWSEAMEDRLQALEEEK 449


>gi|344280952|ref|XP_003412245.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14
            [Loxodonta africana]
          Length = 1196

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 180/375 (48%), Gaps = 9/375 (2%)

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELL 270
             VL +N  L+ L+L  N + +  +K LC  L   N  +++L L  V   D G K I  +L
Sbjct: 665  SVLHTNEDLRELDLFHNHLDELVIKILCQELRHPNCKLQKLLLRFVSFPD-GCKDIFSVL 723

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGN 329
              N  L  L+L  + +  +G  SL EAL   +  +++L L       +    ++  L  N
Sbjct: 724  TQNQNLIHLDLKGSDVGDNGVKSLCEALKCPDCKLQNLRLESCNLSTVCCLNISNALIRN 783

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL  L+L  N++ D+G+  L   L      L  L I    ++  G   ++  + + K L
Sbjct: 784  QSLIFLNLSTNNLLDDGVELLCEALRHPMCYLQRLSIERCGLTVAGCEDLSSSLISSKRL 843

Query: 390  LWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              ++L  N +GD+G + I+DALK  R T+ ++ L   N  S     ++  L  N  +T L
Sbjct: 844  THLSLADNFLGDDGVKLISDALKHPRCTLRSLVLRRCNFTSLSTEYLSASLLLNKSLTHL 903

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGW--CQIGASGAEFVADMLRYNNTISILDL 506
            DL  N +  DG K L + ++ H + N   LG   C + ++    +A  +  N  + ILDL
Sbjct: 904  DLGSNCLKDDGVKLLCDAVR-HPSCNLQDLGLMGCALTSACCLDLASAILNNPNLRILDL 962

Query: 507  RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
              N L+D+GAK L ++ +  +  +  ++L +  +       ++  L++N+   +T +NL 
Sbjct: 963  GNNNLQDDGAKILCEALRHPSCNIERLELEYCGLTALCCQELSATLRSNQ--RLTKINLT 1020

Query: 567  NNFLTKFGQSALTDA 581
             N L + G   L DA
Sbjct: 1021 RNILGREGIKTLCDA 1035



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 152/324 (46%), Gaps = 6/324 (1%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAK 264
            G K    VL  N  L  L+L G+ +GD GVK LC+ L   +  ++ L+L S +L      
Sbjct: 715  GCKDIFSVLTQNQNLIHLDLKGSDVGDNGVKSLCEALKCPDCKLQNLRLESCNLSTVCCL 774

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANAL 322
             I+  L  N  L  L L+ NN++D  G   L EAL      ++ L +        G   L
Sbjct: 775  NISNALIRNQSLIFLNLSTNNLLD-DGVELLCEALRHPMCYLQRLSIERCGLTVAGCEDL 833

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  +K L  L L  N +GD+G++ +   L   +  L  L +   + ++    +++  
Sbjct: 834  SSSLISSKRLTHLSLADNFLGDDGVKLISDALKHPRCTLRSLVLRRCNFTSLSTEYLSAS 893

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            +   KSL  ++L  N + D+G + + DA++     +  + L G  + S     +A  + +
Sbjct: 894  LLLNKSLTHLDLGSNCLKDDGVKLLCDAVRHPSCNLQDLGLMGCALTSACCLDLASAILN 953

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +  LDL  N +  DGAK L E L+    NI  L+L +C + A   + ++  LR N  
Sbjct: 954  NPNLRILDLGNNNLQDDGAKILCEALRHPSCNIERLELEYCGLTALCCQELSATLRSNQR 1013

Query: 501  ISILDLRANGLRDEGAKCLAQSFK 524
            ++ ++L  N L  EG K L  + +
Sbjct: 1014 LTKINLTRNILGREGIKTLCDALQ 1037



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 147/319 (46%), Gaps = 32/319 (10%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L +N +D      L + L   N  ++ L L        G   +  
Sbjct: 663 LCSVLHTNEDLRELDLFHNHLDELVIKILCQELRHPNCKLQKLLLRF-VSFPDGCKDIFS 721

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N++L  L L G+ +GD G+++L   L     KL  L + + ++S     +++  + 
Sbjct: 722 VLTQNQNLIHLDLKGSDVGDNGVKSLCEALKCPDCKLQNLRLESCNLSTVCCLNISNALI 781

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G E + +AL+     +  + +    +   G   ++  L  + 
Sbjct: 782 RNQSLIFLNLSTNNLLDDGVELLCEALRHPMCYLQRLSIERCGLTVAGCEDLSSSLISSK 841

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G DG K +S+ LK     + +L L  C   +   E+++  L  N +++
Sbjct: 842 RLTHLSLADNFLGDDGVKLISDALKHPRCTLRSLVLRRCNFTSLSTEYLSASLLLNKSLT 901

Query: 503 ILDLRANGLRDEGAK----------CLAQSFKVVNEALTS------------------ID 534
            LDL +N L+D+G K          C  Q   ++  ALTS                  +D
Sbjct: 902 HLDLGSNCLKDDGVKLLCDAVRHPSCNLQDLGLMGCALTSACCLDLASAILNNPNLRILD 961

Query: 535 LAFNEIRDDGAFAIAQALK 553
           L  N ++DDGA  + +AL+
Sbjct: 962 LGNNNLQDDGAKILCEALR 980



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 13/262 (4%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +++S  N  D+G+  L E+L +     + +S    G+T AG +     L S+  L  L+L
Sbjct: 789  LNLSTNNLLDDGVELLCEALRHPMCYLQRLSIERCGLTVAGCEDLSSSLISSKRLTHLSL 848

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI------AELLKNNSILRVL 279
            + N +GD+GVK    ++ D     R  L S+ LR     ++      A LL N S+   L
Sbjct: 849  ADNFLGDDGVK----LISDALKHPRCTLRSLVLRRCNFTSLSTEYLSASLLLNKSLTH-L 903

Query: 280  ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +L +N +   G   L +A+   S  ++ L L G    +     LA  +  N +LR L L 
Sbjct: 904  DLGSNCLKDDGVKLLCDAVRHPSCNLQDLGLMGCALTSACCLDLASAILNNPNLRILDLG 963

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N++ D+G + L   L      +  L++    ++A     ++  +++ + L  INL  N 
Sbjct: 964  NNNLQDDGAKILCEALRHPSCNIERLELEYCGLTALCCQELSATLRSNQRLTKINLTRNI 1023

Query: 399  IGDEGAEKIADALKQNRTITTI 420
            +G EG + + DAL+  R    I
Sbjct: 1024 LGREGIKTLCDALQSPRCKLQI 1045


>gi|320165553|gb|EFW42452.1| hypothetical protein CAOG_07295 [Capsaspora owczarzaki ATCC 30864]
          Length = 420

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 130/245 (53%), Gaps = 11/245 (4%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GA  A  +A+ L+ +K++ +L     ++GD G +A+   L      L  L +  N I   
Sbjct: 27  GAAEAQVIAEALKVSKTMADL-----AVGDAGAQAIAEALKV-GTTLIRLSLHRNLIGEV 80

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +AE +K  K+L +++L  N IGD GA+ IA+ALK N T+T +DL  N I   GA A
Sbjct: 81  GAKAIAEALKVNKTLEYLDLSSNQIGDAGAQAIAEALKVNTTVTYLDLHNNQIGDAGAKA 140

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N  +T L+   N IG  GAKAL+  L+ + N+ TL L   +IG +GA   A  
Sbjct: 141 IAEPLKGNKTLTELNFERNWIGNAGAKALARALEVNTNVITLVLDMNRIGDAGAIAFARA 200

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
           +  N T+  LDL  N +   G + + ++F  V   A  ++   F+ +    AF+I   L 
Sbjct: 201 ITQNITLRHLDLLFNCMGIAGIQMIDRAFLSVTGSAYPTLSNQFHPL----AFSIHPRLA 256

Query: 554 ANEDV 558
             +DV
Sbjct: 257 TADDV 261



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 101/204 (49%), Gaps = 29/204 (14%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+AIAE LK  + L  L L+ N+I   G  ++AEAL  N T+  L L+ N  G  GA
Sbjct: 51  DAGAQAIAEALKVGTTLIRLSLHRNLIGEVGAKAIAEALKVNKTLEYLDLSSNQIGDAGA 110

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+A+ L+ N ++  L LH N IGD G +A                             +
Sbjct: 111 QAIAEALKVNTTVTYLDLHNNQIGDAGAKA-----------------------------I 141

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE +K  K+L  +N   N IG+ GA+ +A AL+ N  + T+ L  N I   GA A AR +
Sbjct: 142 AEPLKGNKTLTELNFERNWIGNAGAKALARALEVNTNVITLVLDMNRIGDAGAIAFARAI 201

Query: 440 KDNSVITSLDLAYNPIGADGAKAL 463
             N  +  LDL +N +G  G + +
Sbjct: 202 TQNITLRHLDLLFNCMGIAGIQMI 225



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 94/191 (49%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M+    GD G   +AE+L    T   +S   N I   G KA    L+ N  L+ L+LS N
Sbjct: 44  MADLAVGDAGAQAIAEALKVGTTLIRLSLHRNLIGEVGAKAIAEALKVNKTLEYLDLSSN 103

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + + L  N  V  L L +  + D GAKAIAE LK N  L  L    N I  
Sbjct: 104 QIGDAGAQAIAEALKVNTTVTYLDLHNNQIGDAGAKAIAEPLKGNKTLTELNFERNWIGN 163

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  +LA AL  N+ + +L L+ N  G  GA A A+ +  N +LR L L  N +G  GI+
Sbjct: 164 AGAKALARALEVNTNVITLVLDMNRIGDAGAIAFARAITQNITLRHLDLLFNCMGIAGIQ 223

Query: 349 ALMSGLSSRKG 359
            +     S  G
Sbjct: 224 MIDRAFLSVTG 234



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 95/176 (53%), Gaps = 5/176 (2%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            +AE+L  ++T  +++     +  AG +A    L+    L  L+L  N IG+ G K + +
Sbjct: 33  VIAEALKVSKTMADLA-----VGDAGAQAIAEALKVGTTLIRLSLHRNLIGEVGAKAIAE 87

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L  N  +E L LSS  + D GA+AIAE LK N+ +  L+L+NN I  +G  ++AE L  
Sbjct: 88  ALKVNKTLEYLDLSSNQIGDAGAQAIAEALKVNTTVTYLDLHNNQIGDAGAKAIAEPLKG 147

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           N T+  L+   N+ G  GA ALA+ LE N ++  L L  N IGD G  A    ++ 
Sbjct: 148 NKTLTELNFERNWIGNAGAKALARALEVNTNVITLVLDMNRIGDAGAIAFARAITQ 203



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 8/126 (6%)

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IGA  A+ ++E LK    +  L      +G +GA+ +A+ L+   T+  L L  N + + 
Sbjct: 26  IGAAEAQVIAEALKVSKTMADLA-----VGDAGAQAIAEALKVGTTLIRLSLHRNLIGEV 80

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           GAK +A++ KV N+ L  +DL+ N+I D GA AIA+ALK N    VT L+L NN +   G
Sbjct: 81  GAKAIAEALKV-NKTLEYLDLSSNQIGDAGAQAIAEALKVN--TTVTYLDLHNNQIGDAG 137

Query: 575 QSALTD 580
             A+ +
Sbjct: 138 AKAIAE 143



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 60/138 (43%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +    +D+S    GD G   +AE+L  N T   +    N I  AG KA    L+ N  L 
Sbjct: 93  KTLEYLDLSSNQIGDAGAQAIAEALKVNTTVTYLDLHNNQIGDAGAKAIAEPLKGNKTLT 152

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LN   N IG+ G K L   L  N  V  L L    + D GA A A  +  N  LR L+L
Sbjct: 153 ELNFERNWIGNAGAKALARALEVNTNVITLVLDMNRIGDAGAIAFARAITQNITLRHLDL 212

Query: 282 NNNMIDYSGFTSLAEALL 299
             N +  +G   +  A L
Sbjct: 213 LFNCMGIAGIQMIDRAFL 230


>gi|224085459|ref|XP_002307582.1| predicted protein [Populus trichocarpa]
 gi|222857031|gb|EEE94578.1| predicted protein [Populus trichocarpa]
          Length = 522

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 136/270 (50%), Gaps = 1/270 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L++   L+ L L  + I +E  + +C+++     ++ L   +    
Sbjct: 224 NALGEKGVRAFGMLLKTQNILEELYLINDGISEEAARAVCELIPSTEKLKVLHFHNNMTG 283

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGA AIAE+LK +++L     ++  +   G  +LAEAL   S +R L L  N  G    
Sbjct: 284 DEGAAAIAEMLKQSNLLEDFRCSSTRVGLEGGVALAEALGSCSHLRKLDLRDNMFGVEAG 343

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL+K L     L E++L   ++ DEG  AL + L      L VLD+  N I+AKGA  +
Sbjct: 344 IALSKSLFAFADLTEVYLSYLNLEDEGAEALANALKESAPSLEVLDMAGNDITAKGASSL 403

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARV 438
              I   + L  +NL  N++ DEGA  IA A++  +  +  +DL  N I   GA  +A+ 
Sbjct: 404 VACIVAKQFLTKLNLAENELKDEGAILIAKAIEAGHDQLNEVDLSTNAIRRAGARLLAQA 463

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +       SL++  N I  +G   + ++ K
Sbjct: 464 VVHKPGFKSLNINGNYISDEGIDEVKDIFK 493



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 4/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE   +R L+L+ N  G  G  A    L+    L EL+L  + I +E  RA+   + S +
Sbjct: 211 LEGCKLRYLNLSNNALGEKGVRAFGMLLKTQNILEELYLINDGISEEAARAVCELIPSTE 270

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE +K    L         +G EG   +A+AL     + 
Sbjct: 271 -KLKVLHFHNNMTGDEGAAAIAEMLKQSNLLEDFRCSSTRVGLEGGVALAEALGSCSHLR 329

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +   A+++ L   + +T + L+Y  +  +GA+AL+  LK    ++  L 
Sbjct: 330 KLDLRDNMFGVEAGIALSKSLFAFADLTEVYLSYLNLEDEGAEALANALKESAPSLEVLD 389

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I A GA  +   +     ++ L+L  N L+DEGA  +A++ +  ++ L  +DL+ 
Sbjct: 390 MAGNDITAKGASSLVACIVAKQFLTKLNLAENELKDEGAILIAKAIEAGHDQLNEVDLST 449

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N IR  GA  +AQA+         SLN+  N+++  G   + D
Sbjct: 450 NAIRRAGARLLAQAVVHKP--GFKSLNINGNYISDEGIDEVKD 490


>gi|403264745|ref|XP_003924633.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 384

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N T  ++    NGIT  GI +   +LQ N  L+ LN
Sbjct: 4   SYVNLNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYLQELN 63

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D L  N + +  L+LS  D ++E A  + ++L +N  ++ L+L++
Sbjct: 64  ISNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSH 123

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N+    GA AL  GL GN +L +L L  N +G
Sbjct: 124 NQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLG 183

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+  N IS +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 184 NEGALALGEVL-RLNSCLVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPISVDG 242

Query: 404 AEKIADALKQN 414
           A  +  ++K+N
Sbjct: 243 ALLLILSIKRN 253



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EGI +L+  L      L  L+I
Sbjct: 6   VNLNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENY-YLQELNI 64

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++++   S +W + L  ND  +E A  +   L  N  I  +DL  N
Sbjct: 65  SNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHN 124

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 125 QFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLGN 184

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 185 EGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLES-NESLKVLKLFLNPISVDGA 243

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  ++K N    +  L+++N  +++
Sbjct: 244 LLLILSIKRNPKSRMEELDISNVLVSE 270



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 130/237 (54%), Gaps = 5/237 (2%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +S   L+ HG  +G  G +A+   L S    ++ L++ +N I+ +G   + E ++    L
Sbjct: 3   ESYVNLNHHG--LGPRGTKAIAIALVSNT-TVSKLELEDNGITEEGILSLVEMLQENYYL 59

Query: 390 LWINLYMNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             +N+  N +G EGA  I+D L+ N  +I +++L GN+   + A+ + +VL  N  I  L
Sbjct: 60  QELNISNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKL 119

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           DL++N     G + L ++L  +  + +L L W      GA  + + LR N T++ LDL  
Sbjct: 120 DLSHNQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSM 179

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           NGL +EGA  L +  + +N  L  +D++ N+I ++GA  I++ L++NE + V  L L
Sbjct: 180 NGLGNEGALALGEVLR-LNSCLVYLDVSGNDISNEGASKISKGLESNESLKVLKLFL 235



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 6/226 (2%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFD 211
           +L E  +E      +++S    G EG   +++ L  N ++   +  + N           
Sbjct: 48  SLVEMLQENYYLQELNISNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLC 107

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
            VL SN  +K L+LS N   D G + L  +L  N G+  L LS       GA A+   L+
Sbjct: 108 QVLSSNYRIKKLDLSHNQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLR 167

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L+ N +   G  +L E L  NS +  L ++GN     GA+ ++KGLE N+S
Sbjct: 168 GNVTLTKLDLSMNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLESNES 227

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSR---KGKLAVLDIGNNSISAK 374
           L+ L L  N I  +G  AL+  LS +   K ++  LDI N  +S +
Sbjct: 228 LKVLKLFLNPISVDG--ALLLILSIKRNPKSRMEELDISNVLVSEQ 271


>gi|28866921|gb|AAO59377.1|AF389420_1 NOD27 [Homo sapiens]
 gi|133872920|gb|ABO40479.1| NOD4 [Homo sapiens]
          Length = 1866

 Score =  110 bits (275), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 164/346 (47%), Gaps = 14/346 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1497 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1556

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L + + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1557 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1617 QIGDAGVQHLATILPGLP-ELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1675

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1676 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 1731

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE A 
Sbjct: 1732 -----VLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAA 1786

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
             LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1787 ELAQVLPKMGR-LKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRL 1831



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 96/341 (28%), Positives = 139/341 (40%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
            EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 1509 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 1568

Query: 228  -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                               N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1569 LLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL---------------LENST---------- 303
            +L     LR ++L+ N I  +G   LAE+L               L + T          
Sbjct: 1629 ILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 1688

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    +R  M     R+  L 
Sbjct: 1689 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQIDLV 1748

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               I N +     A  +     +C +L  I L  N +GDE A ++A  L +   +  +DL
Sbjct: 1749 SCKIDNQT-----AKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPKMGRLKRVDL 1803

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1804 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHL 1844



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 94/363 (25%), Positives = 147/363 (40%), Gaps = 57/363 (15%)

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI---DYSGFTSLAEALLE 300
            +N     L+L+  DL    +  + +L++  + L+ L L+   +   D +    L   LL 
Sbjct: 1433 ENPEAVALRLAHCDLGAHHSLLVGQLMETCARLQQLSLSQVNLCEDDDASSLLLQSLLLS 1492

Query: 301  NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS----- 355
             S +++  L  +     G   LA GL     L EL L  N   +EG +ALM  L      
Sbjct: 1493 LSELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWML 1552

Query: 356  ----------------------SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
                                  S+   L  L +  NSI   G  H++E ++   SL  ++
Sbjct: 1553 KRLDLSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELD 1612

Query: 394  LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
            L  N IGD G + +A  L     +  IDL GN+I S G   +A  L     +  L L  N
Sbjct: 1613 LSHNQIGDAGVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCN 1672

Query: 454  PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD-------------------- 493
             +G   A  L++ L  H  +  L L +  +G  GA  +A                     
Sbjct: 1673 ALGDPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAG 1730

Query: 494  -MLRYNNTISIL---DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
             +LR+   + +L   DL +  + ++ AK L  SF     AL  I L++N + D+ A  +A
Sbjct: 1731 GVLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSC-PALEVILLSWNLLGDEAAAELA 1789

Query: 550  QAL 552
            Q L
Sbjct: 1790 QVL 1792



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 5/216 (2%)

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL    +
Sbjct: 1503 SSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLL 1562

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG +G
Sbjct: 1563 NSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAG 1622

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
             + +A +L     +  +DL  N +   G   LA+S  V+   L  + L  N + D  A  
Sbjct: 1623 VQHLATILPGLPELRKIDLSGNSISSAGGVQLAESL-VLCRRLEELMLGCNALGDPTALG 1681

Query: 548  IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            +AQ L  +  V    L+L  + L   G  +L  A D
Sbjct: 1682 LAQELPQHLRV----LHLPFSHLGPGGALSLAQALD 1713



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 28/252 (11%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L G   +  L       GD    AL   L +  G+L +L +  + I+A+G  H+ + +
Sbjct: 680 EALVGCGQIENLSFKSRKCGDAFAEALSRSLPTM-GRLQMLGLAGSKITARGISHLVKAL 738

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV----- 438
             C  L  ++   N + D+    I + L     +  +DL  N+I       +ARV     
Sbjct: 739 PLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCP 798

Query: 439 ------LKDNSVI--------TSLDLAYNP--IGADGAKALSEVLKFHGNINTLKLGWCQ 482
                  ++ ++I        T+ +L   P    +DG +  ++         TL+L  CQ
Sbjct: 799 TVRMLQARERTIIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSL-----TLRLQKCQ 853

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +    AE +  +L+    +  +DL  N L DEG + +A++   ++ A   +DL+ N +  
Sbjct: 854 LQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIA-RKLDLSDNGLSV 912

Query: 543 DGAFAIAQALKA 554
            G   + +A+ A
Sbjct: 913 AGVHCVLRAVSA 924



 Score = 40.0 bits (92), Expect = 3.6,   Method: Composition-based stats.
 Identities = 57/240 (23%), Positives = 93/240 (38%), Gaps = 17/240 (7%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++    R  GD     L+ SL      + +  A + ITA GI      L     LK ++ 
Sbjct: 690 NLSFKSRKCGDAFAEALSRSLPTMGRLQMLGLAGSKITARGISHLVKALPLCPQLKEVSF 749

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             N + D+ V  + ++L     + +L LSS  +       +A +      +R+L+     
Sbjct: 750 RDNQLSDQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCPTVRMLQARERT 809

Query: 286 I--------DYSGFTSLAEALLENSTIR--------SLHLNGNYGGALGANALAKGLEGN 329
           I        + +     A  L E+   R        +L L         A AL   L+  
Sbjct: 810 IIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSLTLRLQKCQLQVHDAEALIALLQEG 869

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             L E+ L GN + DEG R LM+  +S+      LD+ +N +S  G   V   +  C +L
Sbjct: 870 PHLEEVDLSGNQLEDEGCR-LMAEAASQLHIARKLDLSDNGLSVAGVHCVLRAVSACWTL 928


>gi|12653783|gb|AAH00677.1| Ribonuclease/angiogenin inhibitor 1 [Homo sapiens]
 gi|13097567|gb|AAH03506.1| Ribonuclease/angiogenin inhibitor 1 [Homo sapiens]
 gi|23270708|gb|AAH24037.1| Ribonuclease/angiogenin inhibitor 1 [Homo sapiens]
 gi|325464565|gb|ADZ16053.1| ribonuclease/angiogenin inhibitor 1 [synthetic construct]
          Length = 461

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 177/415 (42%), Gaps = 9/415 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSDA---RWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+  L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVHVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D G + L
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 361

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            Q        L  + LA  ++ D    ++A  L AN   ++  L+L+NN L   G
Sbjct: 362 CQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANH--SLRELDLSNNCLGDAG 414



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 180/389 (46%), Gaps = 8/389 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVHVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D G  
Sbjct: 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 416

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDD 543
            L +S +    + E L   D+ ++E  +D
Sbjct: 417 QLVESVRQPGCLLEQLVLYDIYWSEEMED 445



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 395 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430


>gi|440800728|gb|ELR21763.1| Ubiquitinconjugating enzyme subfamily protein [Acanthamoeba
            castellanii str. Neff]
          Length = 1504

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 198/484 (40%), Gaps = 85/484 (17%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + +S+D+S      E    LAE +  +   + +S   N I   G K    VL  +  L  
Sbjct: 716  SITSLDLSYSGITSECCELLAEGILASTHLQRLSLEGNAIRQTGAKELSRVLWDHECLTE 775

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLS---------------------------- 254
            LNLS   + D G K L D L+ N  + +L LS                            
Sbjct: 776  LNLSNCDVNDGGAKELADGLLANKRLVKLDLSRNGLGYSGLRAVLYNLAFSPSIKELNLS 835

Query: 255  -------SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
                   S DL + G +A+++L + N  L  L      I  +   S+ E+L  N  +R L
Sbjct: 836  RVSGSGSSSDLNELG-EALSKLFRINVTLNRLNFWETSIAPAFTASVFESLRGNRALRHL 894

Query: 308  HL------NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL----SSR 357
             +      N +  G LGA      L  N++L  L L  N+I   G+  L   L       
Sbjct: 895  DISQIGTINSDQLGHLGA-----ALTKNRTLASLLLENNNISGHGLETLYKALLVEKEEE 949

Query: 358  KGK-------------------------------LAVLDIGNNSISAKGAFHVAEYIKNC 386
            KGK                               L   ++ NN + +     + + +   
Sbjct: 950  KGKAVNDDERTRKEKRRDEMLDKVKEVEKEFHLNLVEFNLKNNGLGSAAGKILGKLVTVA 1009

Query: 387  KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
             SL  + L    +  +  E +  AL+ N  + T+ L  N +  +GA A+A  L+ N  + 
Sbjct: 1010 SSLEVLTLDHCSLDAKAGETLGLALETNTRLRTLKLRHNTLGKEGAKALAAGLRHNKTLQ 1069

Query: 447  SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
             LDL+ N IG  GA+A++  L  + ++  L L    +   GA  +A  L  N T+  LDL
Sbjct: 1070 VLDLSGNGIGVSGARAIAGTLADNASLTELNLFGNLVDVDGARDLAKALATNKTLVKLDL 1129

Query: 507  RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
              N +RD+GA+ +AQ+     E LT I L  N I+D GA A+A+A+  +   A+ S  LA
Sbjct: 1130 GLNRIRDKGAQAIAQAMASA-EQLTEIGLKLNFIKDHGALAVAKAVSVSP--AIRSFKLA 1186

Query: 567  NNFL 570
             N L
Sbjct: 1187 GNQL 1190



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 216/481 (44%), Gaps = 78/481 (16%)

Query: 174  FGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIG 231
             G +G+  L + L  N+++   +  + +GIT+   +   +G+L S   L+ L+L GN I 
Sbjct: 698  LGLKGVRCLVKGLKNNKSSITSLDLSYSGITSECCELLAEGILAST-HLQRLSLEGNAIR 756

Query: 232  DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
              G K L  +L D+  +  L LS+ D+ D GAK +A+ L  N  L  L+L+ N + YSG 
Sbjct: 757  QTGAKELSRVLWDHECLTELNLSNCDVNDGGAKELADGLLANKRLVKLDLSRNGLGYSGL 816

Query: 292  TSLAEALLENSTIRSLHLN-----------GNYGGALG---------------------- 318
             ++   L  + +I+ L+L+              G AL                       
Sbjct: 817  RAVLYNLAFSPSIKELNLSRVSGSGSSSDLNELGEALSKLFRINVTLNRLNFWETSIAPA 876

Query: 319  -ANALAKGLEGNKSLRELHLHG-NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG- 375
               ++ + L GN++LR L +    +I  + +  L + L+  +  LA L + NN+IS  G 
Sbjct: 877  FTASVFESLRGNRALRHLDISQIGTINSDQLGHLGAALTKNR-TLASLLLENNNISGHGL 935

Query: 376  -----------------AFHVAEYIKNCK------------------SLLWINLYMNDIG 400
                             A +  E  +  K                  +L+  NL  N +G
Sbjct: 936  ETLYKALLVEKEEEKGKAVNDDERTRKEKRRDEMLDKVKEVEKEFHLNLVEFNLKNNGLG 995

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
                + +   +    ++  + L   ++ +K    +   L+ N+ + +L L +N +G +GA
Sbjct: 996  SAAGKILGKLVTVASSLEVLTLDHCSLDAKAGETLGLALETNTRLRTLKLRHNTLGKEGA 1055

Query: 461  KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
            KAL+  L+ +  +  L L    IG SGA  +A  L  N +++ L+L  N +  +GA+ LA
Sbjct: 1056 KALAAGLRHNKTLQVLDLSGNGIGVSGARAIAGTLADNASLTELNLFGNLVDVDGARDLA 1115

Query: 521  QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
            ++    N+ L  +DL  N IRD GA AIAQA+ + E   +T + L  NF+   G  A+  
Sbjct: 1116 KAL-ATNKTLVKLDLGLNRIRDKGAQAIAQAMASAEQ--LTEIGLKLNFIKDHGALAVAK 1172

Query: 581  A 581
            A
Sbjct: 1173 A 1173



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 12/258 (4%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +G +G+R L+ GL + K  +  LD+  + I+++    +AE I     L  ++L  N I  
Sbjct: 698 LGLKGVRCLVKGLKNNKSSITSLDLSYSGITSECCELLAEGILASTHLQRLSLEGNAIRQ 757

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA++++  L  +  +T ++L   +++  GA  +A  L  N  +  LDL+ N +G  G +
Sbjct: 758 TGAKELSRVLWDHECLTELNLSNCDVNDGGAKELADGLLANKRLVKLDLSRNGLGYSGLR 817

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASG------AEFVADMLRYNNTISILDLRANGLRDEG 515
           A+   L F  +I  L L       S        E ++ + R N T++ L+     +    
Sbjct: 818 AVLYNLAFSPSIKELNLSRVSGSGSSSDLNELGEALSKLFRINVTLNRLNFWETSIAPAF 877

Query: 516 AKCLAQSFKVVNEALTSIDLA-FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
              + +S +  N AL  +D++    I  D    +  AL  N  +A  SL L NN ++  G
Sbjct: 878 TASVFESLR-GNRALRHLDISQIGTINSDQLGHLGAALTKNRTLA--SLLLENNNISGHG 934

Query: 575 QSALTDAKDLVYEMSEKE 592
              L  A  L+ E  E++
Sbjct: 935 LETLYKA--LLVEKEEEK 950



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 34/173 (19%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            ++ +     G EG   LA  L +N+T + +  + NGI  +G +A  G L  N +L  LNL
Sbjct: 1042 TLKLRHNTLGKEGAKALAAGLRHNKTLQVLDLSGNGIGVSGARAIAGTLADNASLTELNL 1101

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERL-----------------------QLSSVDLR--- 259
             GN +  +G + L   L  N  + +L                       QL+ + L+   
Sbjct: 1102 FGNLVDVDGARDLAKALATNKTLVKLDLGLNRIRDKGAQAIAQAMASAEQLTEIGLKLNF 1161

Query: 260  --DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
              D GA A+A+ +  +  +R  +L  N ++     ++      N  I+S H++
Sbjct: 1162 IKDHGALAVAKAVSVSPAIRSFKLAGNQLEDETLLAI------NDLIKSPHIS 1208


>gi|410983517|ref|XP_003998085.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 2 [Felis catus]
          Length = 992

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 140/288 (48%), Gaps = 17/288 (5%)

Query: 283 NNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYGGALGAN--ALAKGLEGNK 330
            +M    GF  L+ +L E          +R L   HL   + G   A   ALA  L   +
Sbjct: 683 KSMHAMPGFVWLSRSLYEMQEERLAREAVRGLKVGHLKLTFCGVGPAECAALAFVLRHLR 742

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
               L L  NS+GD G+  L+  L   K     L + +N+IS +G   + E+  +C+ L 
Sbjct: 743 RPVALQLDHNSVGDVGVEQLLPCLDVCKA----LYLRDNNISDRGICKLVEHALHCEQLQ 798

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            + L+ N + D  A  +A  L   +    + LG N+I + GA  +A  L+ N+ +  L  
Sbjct: 799 KLALFNNKLTDGCAHSVARLLACRQNFLALRLGNNHITASGAQVLAEGLRANASLQFLGF 858

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
             N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A ML  N T+  L L  N 
Sbjct: 859 WGNKVGDEGAQALAEALGDHQSLKWLSLVGNNIGSVGAQALALMLEKNVTLEELCLEENH 918

Query: 511 LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           LRDEG   LA+  +  N +L  + L+ N I D GA  + QAL+ N+ +
Sbjct: 919 LRDEGVCSLAKGLQ-RNSSLKVLKLSNNHITDLGAEVLLQALERNDTI 965



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 4/274 (1%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           V  L+L+   +      A+A +L++      L+L++N +   G   L   L      ++L
Sbjct: 716 VGHLKLTFCGVGPAECAALAFVLRHLRRPVALQLDHNSVGDVGVEQLLPCL---DVCKAL 772

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 773 YLRDNNISDRGICKLVEHALHCEQLQKLALFNNKLTDGCAHSVARLLACRQNFLA-LRLG 831

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 832 NNHITASGAQVLAEGLRANASLQFLGFWGNKVGDEGAQALAEALGDHQSLKWLSLVGNNI 891

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            S GA A+A +L+ N  +  L L  N +  +G  +L++ L+ + ++  LKL    I   G
Sbjct: 892 GSVGAQALALMLEKNVTLEELCLEENHLRDEGVCSLAKGLQRNSSLKVLKLSNNHITDLG 951

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           AE +   L  N+TI  + LR N    E  + L+Q
Sbjct: 952 AEVLLQALERNDTILEVWLRGNTFSPEETERLSQ 985



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 104/207 (50%), Gaps = 1/207 (0%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K L L  N I D G+  L +  +    +++L L +  L D  A ++A LL        L 
Sbjct: 770 KALYLRDNNISDRGICKLVEHALHCEQLQKLALFNNKLTDGCAHSVARLLACRQNFLALR 829

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L NN I  SG   LAE L  N++++ L   GN  G  GA ALA+ L  ++SL+ L L GN
Sbjct: 830 LGNNHITASGAQVLAEGLRANASLQFLGFWGNKVGDEGAQALAEALGDHQSLKWLSLVGN 889

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           +IG  G +AL   L  +   L  L +  N +  +G   +A+ ++   SL  + L  N I 
Sbjct: 890 NIGSVGAQALALML-EKNVTLEELCLEENHLRDEGVCSLAKGLQRNSSLKVLKLSNNHIT 948

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNI 427
           D GAE +  AL++N TI  + L GN  
Sbjct: 949 DLGAEVLLQALERNDTILEVWLRGNTF 975



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 87/164 (53%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +A  L   Q    +    N ITA+G +     L++N +L+ L   GN +GDEG + L + 
Sbjct: 815 VARLLACRQNFLALRLGNNHITASGAQVLAEGLRANASLQFLGFWGNKVGDEGAQALAEA 874

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L D+  ++ L L   ++   GA+A+A +L+ N  L  L L  N +   G  SLA+ L  N
Sbjct: 875 LGDHQSLKWLSLVGNNIGSVGAQALALMLEKNVTLEELCLEENHLRDEGVCSLAKGLQRN 934

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           S+++ L L+ N+   LGA  L + LE N ++ E+ L GN+   E
Sbjct: 935 SSLKVLKLSNNHITDLGAEVLLQALERNDTILEVWLRGNTFSPE 978



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 77/149 (51%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           F ++ +   +    G   LAE L  N + + + F  N +   G +A    L  + +LK L
Sbjct: 825 FLALRLGNNHITASGAQVLAEGLRANASLQFLGFWGNKVGDEGAQALAEALGDHQSLKWL 884

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L GN IG  G + L  +L  N  +E L L    LRDEG  ++A+ L+ NS L+VL+L+N
Sbjct: 885 SLVGNNIGSVGAQALALMLEKNVTLEELCLEENHLRDEGVCSLAKGLQRNSSLKVLKLSN 944

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           N I   G   L +AL  N TI  + L GN
Sbjct: 945 NHITDLGAEVLLQALERNDTILEVWLRGN 973



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 89/197 (45%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 778 NISDRGICKLVEHALHCEQLQKLALFNNKLTDGCAHSVARLLACRQNFLALRLGNNHITA 837

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L + L  NA ++ L      + DEGA+A+AE L ++  L+ L L  N I   G  
Sbjct: 838 SGAQVLAEGLRANASLQFLGFWGNKVGDEGAQALAEALGDHQSLKWLSLVGNNIGSVGAQ 897

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA  L +N T+  L L  N+    G  +LAKGL+ N SL+ L L  N I D G   L+ 
Sbjct: 898 ALALMLEKNVTLEELCLEENHLRDEGVCSLAKGLQRNSSLKVLKLSNNHITDLGAEVLLQ 957

Query: 353 GLSSRKGKLAVLDIGNN 369
            L      L V   GN 
Sbjct: 958 ALERNDTILEVWLRGNT 974



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 1/106 (0%)

Query: 141 GFTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
           GF G K+  E  Q L E   + ++   + + G N G  G   LA  L  N T EE+    
Sbjct: 857 GFWGNKVGDEGAQALAEALGDHQSLKWLSLVGNNIGSVGAQALALMLEKNVTLEELCLEE 916

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           N +   G+ +    LQ N +LK L LS N I D G + L   L  N
Sbjct: 917 NHLRDEGVCSLAKGLQRNSSLKVLKLSNNHITDLGAEVLLQALERN 962


>gi|297267091|ref|XP_001116618.2| PREDICTED: ribonuclease inhibitor [Macaca mulatta]
 gi|402892320|ref|XP_003909365.1| PREDICTED: ribonuclease inhibitor isoform 1 [Papio anubis]
 gi|402892322|ref|XP_003909366.1| PREDICTED: ribonuclease inhibitor isoform 2 [Papio anubis]
 gi|355566149|gb|EHH22528.1| Ribonuclease/angiogenin inhibitor 1 [Macaca mulatta]
          Length = 456

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 185/396 (46%), Gaps = 8/396 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + + +     GD G+  + + L       +++S     +T AG     G L+S   L+
Sbjct: 52  ALTELSLRSNELGDAGVHCVLQGLQSPSCKIQKLSLQNCYLTGAGCGVLSGTLRSLPTLQ 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL   +L     + +A +L+     + L 
Sbjct: 112 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELT 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 172 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGITSNNCRDLCSIVASKASLRELALGS 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL      L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 232 NKLGDVGIAELCPGLLHPSSSLRTLWIWECGITAKGCADLCRVLRTKESLKELSLAGNEL 291

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +G  
Sbjct: 292 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLTQNKFLLELQISNNRLGDA 351

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++   L LG C +  S    +A  L  N+++  LDL  N L D G  
Sbjct: 352 GVQELCKGLGQPGSVLRVLWLGDCDMSDSSCSSLAATLLANHSLRELDLSNNCLGDAGVL 411

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDDGAFAIAQ 550
            L +S +    + E L   D+ ++E  +D   A+ +
Sbjct: 412 QLVESVRQPGCLLEQLVLYDIYWSEAMEDRLQALEE 447



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 177/403 (43%), Gaps = 6/403 (1%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L   Q  + V     G+T A        L+ N AL  L+L  N +GD GV C+   L
Sbjct: 16  AELLPLLQQCQVVRLDDCGLTEARCGDISSALRVNPALTELSLRSNELGDAGVHCVLQGL 75

Query: 243 VD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE- 300
              +  +++L L +  L   G   ++  L++   L+ L L++N++  +G   L E LL+ 
Sbjct: 76  QSPSCKIQKLSLQNCYLTGAGCGVLSGTLRSLPTLQELHLSDNLLGDAGLQLLCEGLLDP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
              +  L L      A     LA  L      +EL +  N I + G+R L  GL     +
Sbjct: 136 QCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQ 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITT 419
           L  L + +  I++     +   + +  SL  + L  N +GD G AE     L  + ++ T
Sbjct: 196 LEALKLESCGITSNNCRDLCSIVASKASLRELALGSNKLGDVGIAELCPGLLHPSSSLRT 255

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKL 478
           + +    I +KG + + RVL+    +  L LA N +G +GA+ L E L   G  + +L +
Sbjct: 256 LWIWECGITAKGCADLCRVLRTKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 315

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
             C   A+     + +L  N  +  L +  N L D G + L +        L  + L   
Sbjct: 316 KSCSFTAACCSHFSSVLTQNKFLLELQISNNRLGDAGVQELCKGLGQPGSVLRVLWLGDC 375

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           ++ D    ++A  L AN   ++  L+L+NN L   G   L ++
Sbjct: 376 DMSDSSCSSLAATLLANH--SLRELDLSNNCLGDAGVLQLVES 416



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 109/270 (40%), Gaps = 44/270 (16%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  ++   +     GITA G  
Sbjct: 220 SKASLRELA----------LGSNKLGDVGIAELCPGLLHPSSSLRTLWIWECGITAKGCA 269

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIA 267
               VL++  +LK L+L+GN +GDEG + LC+ L++    +E L + S           +
Sbjct: 270 DLCRVLRTKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 329

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGL 326
            +L  N  L  L+++NN +  +G   L + L +  S +R L L          ++LA  L
Sbjct: 330 SVLTQNKFLLELQISNNRLGDAGVQELCKGLGQPGSVLRVLWLGDCDMSDSSCSSLAATL 389

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             N SLREL                             D+ NN +   G   + E ++  
Sbjct: 390 LANHSLREL-----------------------------DLSNNCLGDAGVLQLVESVRQP 420

Query: 387 KSLLWINLYMNDI-GDEGAEKIADALKQNR 415
             LL   L + DI   E  E    AL++ +
Sbjct: 421 GCLL-EQLVLYDIYWSEAMEDRLQALEEEK 449


>gi|357444341|ref|XP_003592448.1| Ran GTPase-activating protein [Medicago truncatula]
 gi|355481496|gb|AES62699.1| Ran GTPase-activating protein [Medicago truncatula]
          Length = 533

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 139/269 (51%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I +E  + + +++     ++ L   
Sbjct: 217 LNLSDNALGEKGVRAFGTLLKSQSCLEELYLMNDGISEEAAQAVSELIPSTEKLKVLHFH 276

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA+AIAE++K +S L     ++  I   G  +L++AL + + +R L L  N  
Sbjct: 277 NNMTGDEGARAIAEVVKRSSCLEDFRCSSTRIGDEGGVALSDALGDCTHLRKLDLRDNML 336

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G  +L+K L  N  LRE++L   ++ DEG  A+ + L +   +L VL++  N+I+  
Sbjct: 337 GVEGGVSLSKALAKNAELREIYLSFLNLEDEGAIAIANALKASAPRLEVLEMSGNNITVD 396

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  +   + L  +NL  N++ DEGA +I+ AL+    +  IDL  N I   GA  
Sbjct: 397 AAPAIANCLAAKQFLAKLNLSENELKDEGAIQISKALEGLSQLKEIDLSCNRITRDGAQQ 456

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKAL 463
           +A  +        LD+  N I  +G K L
Sbjct: 457 LALTVLQKVDFERLDIDGNFISDEGIKEL 485



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 153/329 (46%), Gaps = 31/329 (9%)

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           ++ F   L+ ++ LK LNLS N +G++GV+    +L   + +E L L +  + +E A+A+
Sbjct: 202 MRIFSATLEGSV-LKYLNLSDNALGEKGVRAFGTLLKSQSCLEELYLMNDGISEEAAQAV 260

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           +EL+ +   L+VL  +NNM                             G  GA A+A+ +
Sbjct: 261 SELIPSTEKLKVLHFHNNMT----------------------------GDEGARAIAEVV 292

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           + +  L +       IGDEG  AL   L      L  LD+ +N +  +G   +++ +   
Sbjct: 293 KRSSCLEDFRCSSTRIGDEGGVALSDALGDCT-HLRKLDLRDNMLGVEGGVSLSKALAKN 351

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             L  I L   ++ DEGA  IA+ALK +   +  +++ GNNI    A AIA  L     +
Sbjct: 352 AELREIYLSFLNLEDEGAIAIANALKASAPRLEVLEMSGNNITVDAAPAIANCLAAKQFL 411

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
             L+L+ N +  +GA  +S+ L+    +  + L   +I   GA+ +A  +        LD
Sbjct: 412 AKLNLSENELKDEGAIQISKALEGLSQLKEIDLSCNRITRDGAQQLALTVLQKVDFERLD 471

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSID 534
           +  N + DEG K L   F+   + L  +D
Sbjct: 472 IDGNFISDEGIKELMVIFEKSPDKLGPLD 500



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 138/279 (49%), Gaps = 5/279 (1%)

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           A LE S ++ L+L+ N  G  G  A    L+    L EL+L  + I +E  +A+   + S
Sbjct: 207 ATLEGSVLKYLNLSDNALGEKGVRAFGTLLKSQSCLEELYLMNDGISEEAAQAVSELIPS 266

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
            + KL VL   NN    +GA  +AE +K    L         IGDEG   ++DAL     
Sbjct: 267 TE-KLKVLHFHNNMTGDEGARAIAEVVKRSSCLEDFRCSSTRIGDEGGVALSDALGDCTH 325

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINT 475
           +  +DL  N +  +G  ++++ L  N+ +  + L++  +  +GA A++  LK     +  
Sbjct: 326 LRKLDLRDNMLGVEGGVSLSKALAKNAELREIYLSFLNLEDEGAIAIANALKASAPRLEV 385

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
           L++    I    A  +A+ L     ++ L+L  N L+DEGA  ++++ + +++ L  IDL
Sbjct: 386 LEMSGNNITVDAAPAIANCLAAKQFLAKLNLSENELKDEGAIQISKALEGLSQ-LKEIDL 444

Query: 536 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           + N I  DGA  +  AL   + V    L++  NF++  G
Sbjct: 445 SCNRITRDGAQQL--ALTVLQKVDFERLDIDGNFISDEG 481



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 122/265 (46%), Gaps = 32/265 (12%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           LEG+  L+ L+L  N++G++G+RA  + L S+   L  L + N+ IS + A  V+E I +
Sbjct: 209 LEGS-VLKYLNLSDNALGEKGVRAFGTLLKSQSC-LEELYLMNDGISEEAAQAVSELIPS 266

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            + L  ++ + N  GDEGA                             AIA V+K +S +
Sbjct: 267 TEKLKVLHFHNNMTGDEGAR----------------------------AIAEVVKRSSCL 298

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
                +   IG +G  ALS+ L    ++  L L    +G  G   ++  L  N  +  + 
Sbjct: 299 EDFRCSSTRIGDEGGVALSDALGDCTHLRKLDLRDNMLGVEGGVSLSKALAKNAELREIY 358

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           L    L DEGA  +A + K     L  ++++ N I  D A AIA  L A + +A   LNL
Sbjct: 359 LSFLNLEDEGAIAIANALKASAPRLEVLEMSGNNITVDAAPAIANCLAAKQFLA--KLNL 416

Query: 566 ANNFLTKFGQSALTDAKDLVYEMSE 590
           + N L   G   ++ A + + ++ E
Sbjct: 417 SENELKDEGAIQISKALEGLSQLKE 441


>gi|326922059|ref|XP_003207269.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1-like [Meleagris gallopavo]
          Length = 951

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 123/230 (53%), Gaps = 5/230 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N+I D G++ L+   S    KLAV+ +  N I+  GA  + E +   + + ++ L
Sbjct: 706 LDLDNNNINDYGVKQLLPCFS----KLAVIRLSVNQITDHGARILYEELSKYQIVSYLGL 761

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           Y N I D GA+ +A  +++  ++  + +G N I S+G   +A+ ++ ++ +  + +  N 
Sbjct: 762 YNNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQ 821

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G +GAKA +E L+ H  +  + L +  I   G + +A+ L++NN++ I  L  N L DE
Sbjct: 822 VGDEGAKAFAEALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNNSVKIFWLTKNELDDE 881

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            A   A+  K +N+ L  + L  N+I   G   +++ALK N  +    LN
Sbjct: 882 AAMSFAEMLK-INKKLVHLWLIQNQITAKGVKYLSEALKENTAIKEVCLN 930



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 124/248 (50%), Gaps = 4/248 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+NN I+  G   L     + + IR   L+ N     GA  L + L   + +  L L+
Sbjct: 706 LDLDNNNINDYGVKQLLPCFSKLAVIR---LSVNQITDHGARILYEELSKYQIVSYLGLY 762

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N I D G +  ++ L      L  + IG N I+++G   +A+ I+   ++  I ++ N 
Sbjct: 763 NNQITDIGAK-YVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQ 821

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +GDEGA+  A+AL+ +  +T + L  N I ++G  +IA  L+ N+ +    L  N +  +
Sbjct: 822 VGDEGAKAFAEALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNNSVKIFWLTKNELDDE 881

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
            A + +E+LK +  +  L L   QI A G +++++ L+ N  I  + L  N +  E AK 
Sbjct: 882 AAMSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALKENTAIKEVCLNGNLISQEEAKA 941

Query: 519 LAQSFKVV 526
                ++V
Sbjct: 942 FESEERIV 949



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 98/201 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E   + +  S + +      D G  ++A+ +    + E V   AN IT+ G K   
Sbjct: 744 RILYEELSKYQIVSYLGLYNNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLA 803

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             +Q +  +  + + GN +GDEG K   + L ++  +  + L+   +  EG K+IAE L+
Sbjct: 804 QAIQKSTTMFEIGMWGNQVGDEGAKAFAEALRNHPRLTNVSLAFNGITTEGGKSIAEALQ 863

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           +N+ +++  L  N +D     S AE L  N  +  L L  N   A G   L++ L+ N +
Sbjct: 864 HNNSVKIFWLTKNELDDEAAMSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALKENTA 923

Query: 332 LRELHLHGNSIGDEGIRALMS 352
           ++E+ L+GN I  E  +A  S
Sbjct: 924 IKEVCLNGNLISQEEAKAFES 944



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 4/204 (1%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           KQ L  F+K     + + +S     D G   L E L   Q    +    N IT  G K  
Sbjct: 719 KQLLPCFSK----LAVIRLSVNQITDHGARILYEELSKYQIVSYLGLYNNQITDIGAKYV 774

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             +++   +L+ + +  N I  EG KCL   +  +  +  + +    + DEGAKA AE L
Sbjct: 775 AKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQVGDEGAKAFAEAL 834

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +N+  L  + L  N I   G  S+AEAL  N++++   L  N      A + A+ L+ NK
Sbjct: 835 RNHPRLTNVSLAFNGITTEGGKSIAEALQHNNSVKIFWLTKNELDDEAAMSFAEMLKINK 894

Query: 331 SLRELHLHGNSIGDEGIRALMSGL 354
            L  L L  N I  +G++ L   L
Sbjct: 895 KLVHLWLIQNQITAKGVKYLSEAL 918



 Score = 42.7 bits (99), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 106/280 (37%), Gaps = 49/280 (17%)

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA----FHVA 380
           G +   +   LHL   S       AL   +  R G   +L   N   SA+ A    FHV 
Sbjct: 510 GCDDQSTYEFLHLTLQSF----FTALFLVMEERAGNKELLQFFNECSSAEAAQRTCFHVP 565

Query: 381 ---------EYIKNCKSLLWINLYMNDIGDEGAEKIADAL-------KQNRTITTIDLGG 424
                    +  +N +   + NL++  +     EK+   L       K+ +T+ T     
Sbjct: 566 WLKKPLTGEDPFRNNEHFHFTNLFLCGLLSRSNEKLFKHLVLPAVIRKKRKTLITYLGES 625

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAY----------NPIGADGAKALSEVLKFHGNIN 474
              H KG +  +R+ K N V    +  +            +G   AK      + H N  
Sbjct: 626 MKSHLKGVTR-SRLPKYNQVQVQPNFVWMLRCIYETQNEKVGKLAAK------RMHANY- 677

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
            +KL +C   ++    ++ ++ +      LDL  N + D G K L   F      L  I 
Sbjct: 678 -IKLTYCNAYSADCSAISFVMHHFQKRLALDLDNNNINDYGVKQLLPCFS----KLAVIR 732

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           L+ N+I D GA  + + L   +   V+ L L NN +T  G
Sbjct: 733 LSVNQITDHGARILYEELSKYQ--IVSYLGLYNNQITDIG 770


>gi|114053011|ref|NP_001040578.1| ribonuclease/angiogenin inhibitor [Rattus norvegicus]
 gi|24527259|gb|AAL60586.1| ribonuclease/angiogenin inhibitor [Homo sapiens]
 gi|62548127|gb|AAO86769.2| ribonuclease/angiogenin inhibitor [Rattus norvegicus]
          Length = 461

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 177/415 (42%), Gaps = 9/415 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSDA---RWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D G   L
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVAEL 361

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            Q        L  + LA  ++ D    ++A  L AN   ++  L+L+NN L   G
Sbjct: 362 CQGPGQPGSVLRVLWLADCDVSDSSCSSLAATLLANH--SLRELDLSNNCLGDAG 414



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 178/389 (45%), Gaps = 8/389 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL    L     + +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G   L +     G++   L L  C +  S    +A  L  N+++  LDL  N L D G  
Sbjct: 357 GVAELCQGPGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 416

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDD 543
            L +S +    + E L   D+ ++E  +D
Sbjct: 417 QLVESVRQPGCLLEQLVLYDIYWSEEMED 445



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 91/219 (41%), Gaps = 47/219 (21%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELLKN----NSILRVLELNNNMIDYSGFTSLA 295
            +L  N  +  LQ+S+  L D G   +AEL +      S+LRVL L +  +  S  +SLA
Sbjct: 335 SVLAQNRFLLELQISNNRLEDAG---VAELCQGPGQPGSVLRVLWLADCDVSDSSCSSLA 391

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
             LL N ++R L L+ N  G  G   L + +     L E
Sbjct: 392 ATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430


>gi|354491394|ref|XP_003507840.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Cricetulus griseus]
 gi|344253089|gb|EGW09193.1| Nucleotide-binding oligomerization domain-containing protein 1
           [Cricetulus griseus]
          Length = 953

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 114/219 (52%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G++ L    S    +L V+ +  N I+  G   + E +   K + ++ LY N I D GA+
Sbjct: 719 GVQELQPCFS----RLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAK 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + R +T + LG N I  +G   +A  +K+++ I  + +  N IG +GAKA +E
Sbjct: 775 YVAQILDECRGLTHLKLGKNRITGEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H +++ L L +  I   G + +A  L+ N T++I  L  N L DE A+C A+  K 
Sbjct: 835 ALRDHPSLSNLSLAFNGISPEGGKSLAQALKQNTTLTIFWLTKNELNDEAAECFAEMLK- 893

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           VN+ L  + L  N I   G   +A+AL+ N  +    LN
Sbjct: 894 VNQTLRHLWLIQNHITVKGTAQLAEALQKNSTITEICLN 932



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K +  L L+ N I D G + +   L   +G L  L +G N I+ +G  
Sbjct: 744 GVKVLCEELTKYKIVTFLGLYNNQITDIGAKYVAQILDECRG-LTHLKLGKNRITGEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            VA  +KN  S++ + ++ N IGDEGA+  A+AL+ + +++ + L  N I  +G  ++A+
Sbjct: 803 CVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALRDHPSLSNLSLAFNGISPEGGKSLAQ 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            LK N+ +T   L  N +  + A+  +E+LK +  +  L L    I   G   +A+ L+ 
Sbjct: 863 ALKQNTTLTIFWLTKNELNDEAAECFAEMLKVNQTLRHLWLIQNHITVKGTAQLAEALQK 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N+TI+ + L  N +  E AK      +++
Sbjct: 923 NSTITEICLNGNLINQEEAKVFENEKRII 951



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 109/216 (50%), Gaps = 1/216 (0%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK LC+ L     V  L L +  + D GAK +A++L     L  L
Sbjct: 730 LTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAKYVAQILDECRGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G   +A A+  +++I  + + GN  G  GA A A+ L  + SL  L L  
Sbjct: 790 KLGKNRITGEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALRDHPSLSNLSLAF 849

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  EG ++L   L  +   L +  +  N ++ + A   AE +K  ++L  + L  N I
Sbjct: 850 NGISPEGGKSLAQAL-KQNTTLTIFWLTKNELNDEAAECFAEMLKVNQTLRHLWLIQNHI 908

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
             +G  ++A+AL++N TIT I L GN I+ + A   
Sbjct: 909 TVKGTAQLAEALQKNSTITEICLNGNLINQEEAKVF 944



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 3/191 (1%)

Query: 158 AKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
            +EL  +  V   G       D G  ++A+ L   +    +    N IT  G K     +
Sbjct: 749 CEELTKYKIVTFLGLYNNQITDIGAKYVAQILDECRGLTHLKLGKNRITGEGGKCVALAV 808

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           +++ ++  + + GN IGDEG K   + L D+  +  L L+   +  EG K++A+ LK N+
Sbjct: 809 KNSTSIVDVGMWGNQIGDEGAKAFAEALRDHPSLSNLSLAFNGISPEGGKSLAQALKQNT 868

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L +  L  N ++       AE L  N T+R L L  N+    G   LA+ L+ N ++ E
Sbjct: 869 TLTIFWLTKNELNDEAAECFAEMLKVNQTLRHLWLIQNHITVKGTAQLAEALQKNSTITE 928

Query: 335 LHLHGNSIGDE 345
           + L+GN I  E
Sbjct: 929 ICLNGNLINQE 939



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 84/189 (44%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G K    +L     L  L L 
Sbjct: 733 IRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGAKYVAQILDECRGLTHLKLG 792

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG KC+   + ++  +  + +    + DEGAKA AE L+++  L  L L  N I
Sbjct: 793 KNRITGEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALRDHPSLSNLSLAFNGI 852

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA+AL +N+T+    L  N      A   A+ L+ N++LR L L  N I  +G
Sbjct: 853 SPEGGKSLAQALKQNTTLTIFWLTKNELNDEAAECFAEMLKVNQTLRHLWLIQNHITVKG 912

Query: 347 IRALMSGLS 355
              L   L 
Sbjct: 913 TAQLAEALQ 921


>gi|290980071|ref|XP_002672756.1| predicted protein [Naegleria gruberi]
 gi|284086335|gb|EFC40012.1| predicted protein [Naegleria gruberi]
          Length = 385

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 207/405 (51%), Gaps = 70/405 (17%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F  E++  +S+D++    GDEG  F++   G       ++   N I   G K   G+  
Sbjct: 12  KFISEMKHLTSLDIADNQIGDEGSKFIS---GMKHLT-SLNIDRNQIGVEGAKLISGMK- 66

Query: 216 SNIALKTLNLSGNPIGDEGVKCLC--------DILVDNAGVE------RL-QLSSVDLR- 259
              +L +L++  N IG EG K +         DI  +  GVE      R+ QL+S+++  
Sbjct: 67  ---SLISLSIGDNQIGVEGAKLISGMKHLTSLDINRNQIGVEGAKSISRMKQLTSLNIYY 123

Query: 260 ----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
                EGAK+I+ + +    L  L++  N I       ++E       + SL +  N  G
Sbjct: 124 NQIGAEGAKSISGMKQ----LTSLDIGGNQIGVEESKYISEM----KQLTSLDIYNNQIG 175

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G    AK + G K L  L++  N IG EG     S L S   +L  L+IG+N I  +G
Sbjct: 176 VEG----AKSISGMKQLTSLNIGFNRIGVEG-----SKLISEMKQLTSLNIGSNEIGVEG 226

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
               +++I   K L  +N+Y N+IGDEG++ I++ +KQ   +T++D+  N I  +GA  I
Sbjct: 227 ----SKFIPEMKHLTSLNIYYNEIGDEGSKYISE-MKQ---LTSLDIYYNEIGVEGAKYI 278

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           + + +    +TSL ++ N IG +GAK +SE +K    + +L +   QIG  G++F+++M 
Sbjct: 279 SEMKQ----LTSLGISDNQIGVEGAKFISE-MKL---LTSLDIADNQIGDEGSKFISEM- 329

Query: 496 RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
               +++ L++ +N + DEGAK ++       + LTS+ + +N+I
Sbjct: 330 ---KSLTSLNVNSNQIGDEGAKLISGM-----KQLTSLKIYYNQI 366



 Score = 45.4 bits (106), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 75/140 (53%), Gaps = 19/140 (13%)

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +TSLD+A N IG +G+K +S +     ++ +L +   QIG  GA+ ++ M     ++  L
Sbjct: 20  LTSLDIADNQIGDEGSKFISGM----KHLTSLNIDRNQIGVEGAKLISGM----KSLISL 71

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            +  N +  EGAK ++       + LTS+D+  N+I  +GA +I++  +      +TSLN
Sbjct: 72  SIGDNQIGVEGAKLISGM-----KHLTSLDINRNQIGVEGAKSISRMKQ------LTSLN 120

Query: 565 LANNFLTKFGQSALTDAKDL 584
           +  N +   G  +++  K L
Sbjct: 121 IYYNQIGAEGAKSISGMKQL 140


>gi|350529351|ref|NP_115582.4| protein NLRC5 [Homo sapiens]
 gi|269849666|sp|Q86WI3.3|NLRC5_HUMAN RecName: Full=Protein NLRC5; AltName: Full=Caterpiller protein 16.1;
            Short=CLR16.1; AltName: Full=Nucleotide-binding
            oligomerization domain protein 27; AltName:
            Full=Nucleotide-binding oligomerization domain protein 4
          Length = 1866

 Score =  110 bits (274), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 164/346 (47%), Gaps = 14/346 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1497 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1556

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L + + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1557 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1617 QIGDAGVQHLATILPGLP-ELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1675

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1676 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 1731

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE A 
Sbjct: 1732 -----VLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAA 1786

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
             LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1787 ELAQVLPQMGR-LKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRL 1831



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 96/341 (28%), Positives = 141/341 (41%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
            EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 1509 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 1568

Query: 228  -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                               N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1569 LLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL---------------LENST---------- 303
            +L     LR ++L+ N I  +G   LAE+L               L + T          
Sbjct: 1629 ILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 1688

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    +R  M     R+    
Sbjct: 1689 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQ---- 1744

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             +D+ +  I  + A  +     +C +L  I L  N +GDE A ++A  L Q   +  +DL
Sbjct: 1745 -IDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDL 1803

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1804 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHL 1844



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 5/216 (2%)

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL    +
Sbjct: 1503 SSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLL 1562

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG +G
Sbjct: 1563 NSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAG 1622

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
             + +A +L     +  +DL  N +   G   LA+S  V+   L  + L  N + D  A  
Sbjct: 1623 VQHLATILPGLPELRKIDLSGNSISSAGGVQLAESL-VLCRRLEELMLGCNALGDPTALG 1681

Query: 548  IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            +AQ L  +  V    L+L  + L   G  +L  A D
Sbjct: 1682 LAQELPQHLRV----LHLPFSHLGPGGALSLAQALD 1713



 Score = 51.6 bits (122), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 28/252 (11%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L G   +  L       GD    AL   L +  G+L +L +  + I+A+G  H+ + +
Sbjct: 680 EALVGCGQIENLSFKSRKCGDAFAEALSRSLPTM-GRLQMLGLAGSKITARGISHLVKAL 738

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV----- 438
             C  L  ++   N + D+    I + L     +  +DL  N+I       +ARV     
Sbjct: 739 PLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCP 798

Query: 439 --------------LKDNSVITSLDLAYNP--IGADGAKALSEVLKFHGNINTLKLGWCQ 482
                         L      T+ +L   P    +DG +  ++         TL+L  CQ
Sbjct: 799 TVRMLQAREADLIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSL-----TLRLQKCQ 853

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +    AE +  +L+    +  +DL  N L DEG + +A++   ++ A   +DL+ N +  
Sbjct: 854 LQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIA-RKLDLSNNGLSV 912

Query: 543 DGAFAIAQALKA 554
            G   + +A+ A
Sbjct: 913 AGVHCVLRAVSA 924



 Score = 42.0 bits (97), Expect = 0.89,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 17/236 (7%)

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            TL L    +     + L  +L +   +E + LS   L DEG + +AE      I R L+L
Sbjct: 846  TLRLQKCQLQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIARKLDL 905

Query: 282  NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +NN +  +G   +  A+    T+  LH++  +   +     A+  E  K  +E     +S
Sbjct: 906  SNNGLSVAGVHCVLRAVSACWTLAELHISLQHKTVI--FMFAQEPEEQKGPQERAAFLDS 963

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSI-----SAKGAFHVAEYIKNCKSLLWINLYM 396
            +  +    L   LSSR+ +L    +    +     +  G+ H+          L ++   
Sbjct: 964  LMLQMPSEL--PLSSRRMRLTHCGLQEKHLEQLCKALGGSCHLGH--------LHLDFSG 1013

Query: 397  NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            N +GDEGA ++A  L     + +++L  N +       + R       +  LD+++
Sbjct: 1014 NALGDEGAARLAQLLPGLGALQSLNLSENGLSLDAVLGLVRCFSTLQWLFRLDISF 1069



 Score = 39.7 bits (91), Expect = 4.7,   Method: Composition-based stats.
 Identities = 58/240 (24%), Positives = 94/240 (39%), Gaps = 17/240 (7%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++    R  GD     L+ SL      + +  A + ITA GI      L     LK ++ 
Sbjct: 690 NLSFKSRKCGDAFAEALSRSLPTMGRLQMLGLAGSKITARGISHLVKALPLCPQLKEVSF 749

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE----- 280
             N + D+ V  + ++L     + +L LSS  +       +A +      +R+L+     
Sbjct: 750 RDNQLSDQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCPTVRMLQAREAD 809

Query: 281 ---LNNNMIDYSGFTSLAEALLENSTIR--------SLHLNGNYGGALGANALAKGLEGN 329
              L +   + +     A  L E+   R        +L L         A AL   L+  
Sbjct: 810 LIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSLTLRLQKCQLQVHDAEALIALLQEG 869

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             L E+ L GN + DEG R LM+  +S+      LD+ NN +S  G   V   +  C +L
Sbjct: 870 PHLEEVDLSGNQLEDEGCR-LMAEAASQLHIARKLDLSNNGLSVAGVHCVLRAVSACWTL 928


>gi|162318134|gb|AAI56513.1| NLR family, CARD domain containing 5 [synthetic construct]
 gi|225000244|gb|AAI72510.1| NLR family, CARD domain containing 5 [synthetic construct]
          Length = 1866

 Score =  110 bits (274), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 164/346 (47%), Gaps = 14/346 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1497 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1556

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L + + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1557 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1617 QIGDAGVQHLATILPGLP-ELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1675

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1676 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 1731

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE A 
Sbjct: 1732 -----VLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAA 1786

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
             LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1787 ELAQVLPQMGR-LKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRL 1831



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 96/341 (28%), Positives = 141/341 (41%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
            EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 1509 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 1568

Query: 228  -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                               N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1569 LLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL---------------LENST---------- 303
            +L     LR ++L+ N I  +G   LAE+L               L + T          
Sbjct: 1629 ILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 1688

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    +R  M     R+    
Sbjct: 1689 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQ---- 1744

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             +D+ +  I  + A  +     +C +L  I L  N +GDE A ++A  L Q   +  +DL
Sbjct: 1745 -IDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDL 1803

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1804 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHL 1844



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 5/216 (2%)

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL    +
Sbjct: 1503 SSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLL 1562

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG +G
Sbjct: 1563 NSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAG 1622

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
             + +A +L     +  +DL  N +   G   LA+S  V+   L  + L  N + D  A  
Sbjct: 1623 VQHLATILPGLPELRKIDLSGNSISSAGGVQLAESL-VLCRRLEELMLGCNALGDPTALG 1681

Query: 548  IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            +AQ L  +  V    L+L  + L   G  +L  A D
Sbjct: 1682 LAQELPQHLRV----LHLPFSHLGPGGALSLAQALD 1713



 Score = 51.6 bits (122), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 28/252 (11%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L G   +  L       GD    AL   L +  G+L +L +  + I+A+G  H+ + +
Sbjct: 680 EALVGCGQIENLSFKSRKCGDAFAEALSRSLPTM-GRLQMLGLAGSKITARGISHLVKAL 738

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV----- 438
             C  L  ++   N + D+    I + L     +  +DL  N+I       +ARV     
Sbjct: 739 PLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCP 798

Query: 439 --------------LKDNSVITSLDLAYNP--IGADGAKALSEVLKFHGNINTLKLGWCQ 482
                         L      T+ +L   P    +DG +  ++         TL+L  CQ
Sbjct: 799 TVRMLQAREADLIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSL-----TLRLQKCQ 853

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +    AE +  +L+    +  +DL  N L DEG + +A++   ++ A   +DL+ N +  
Sbjct: 854 LQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIA-RKLDLSDNGLSV 912

Query: 543 DGAFAIAQALKA 554
            G   + +A+ A
Sbjct: 913 AGVHCVLRAVSA 924


>gi|119603307|gb|EAW82901.1| nucleotide-binding oligomerization domains 27, isoform CRA_d [Homo
            sapiens]
          Length = 1837

 Score =  110 bits (274), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 164/346 (47%), Gaps = 14/346 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1468 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1527

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L + + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1528 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1587

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1588 QIGDAGVQHLATILPGLP-ELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1646

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1647 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 1702

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE A 
Sbjct: 1703 -----VLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAA 1757

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
             LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1758 ELAQVLPQMGR-LKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRL 1802



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 96/341 (28%), Positives = 141/341 (41%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
            EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 1480 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 1539

Query: 228  -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                               N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1540 LLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1599

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL---------------LENST---------- 303
            +L     LR ++L+ N I  +G   LAE+L               L + T          
Sbjct: 1600 ILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 1659

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    +R  M     R+    
Sbjct: 1660 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQ---- 1715

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             +D+ +  I  + A  +     +C +L  I L  N +GDE A ++A  L Q   +  +DL
Sbjct: 1716 -IDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDL 1774

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1775 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHL 1815



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 5/216 (2%)

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL    +
Sbjct: 1474 SSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLL 1533

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG +G
Sbjct: 1534 NSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAG 1593

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
             + +A +L     +  +DL  N +   G   LA+S  V+   L  + L  N + D  A  
Sbjct: 1594 VQHLATILPGLPELRKIDLSGNSISSAGGVQLAESL-VLCRRLEELMLGCNALGDPTALG 1652

Query: 548  IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            +AQ L  +  V    L+L  + L   G  +L  A D
Sbjct: 1653 LAQELPQHLRV----LHLPFSHLGPGGALSLAQALD 1684



 Score = 51.6 bits (122), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 28/252 (11%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L G   +  L       GD    AL   L +  G+L +L +  + I+A+G  H+ + +
Sbjct: 680 EALVGCGQIENLSFKSRKCGDAFAEALSRSLPTM-GRLQMLGLAGSKITARGISHLVKAL 738

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV----- 438
             C  L  ++   N + D+    I + L     +  +DL  N+I       +ARV     
Sbjct: 739 PLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCP 798

Query: 439 --------------LKDNSVITSLDLAYNP--IGADGAKALSEVLKFHGNINTLKLGWCQ 482
                         L      T+ +L   P    +DG +  ++         TL+L  CQ
Sbjct: 799 TVRMLQAREADLIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSL-----TLRLQKCQ 853

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +    AE +  +L+    +  +DL  N L DEG + +A++   ++ A   +DL+ N +  
Sbjct: 854 LQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIA-RKLDLSDNGLSV 912

Query: 543 DGAFAIAQALKA 554
            G   + +A+ A
Sbjct: 913 AGVHCVLRAVSA 924


>gi|444730156|gb|ELW70547.1| NACHT, LRR and PYD domains-containing protein 12 [Tupaia chinensis]
          Length = 408

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 173/387 (44%), Gaps = 9/387 (2%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRD 260
           +TA+  +    V ++N  L  L    N + D G+K LC+ L   N  ++ L+L    +  
Sbjct: 13  LTASCGRDLSLVFETNQYLTDLEFVKNTLEDSGMKLLCEGLKQPNCILQALRLYRCLISP 72

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNY---GGA 316
               A+A +L  N  L  LE +   ++ S    L E L + N  ++ L L  +       
Sbjct: 73  ASCGALAAVLSTNQWLTELEFSETKLEASALKLLCEGLKDPNCKLQKLKLCASLLPENSE 132

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                LA  L  N  L EL L  N +GD G++ L  GL     KL  LD+    ++    
Sbjct: 133 AVCKYLASVLICNPHLTELDLSENPLGDIGVKYLCEGLRHSNCKLEKLDLSTCYLTQASC 192

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAI 435
             ++ +++  ++L  + ++ N +GD G + + + L+  +  I  + L   ++ +     +
Sbjct: 193 VELSSFLQVSQTLKELFVFANALGDTGVQHLCEGLQHAKGIIENLVLSECSLSAACCEPL 252

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADM 494
           A+VL     +T L L  N IG  G K L E LK     +  L L  C +  +  + + + 
Sbjct: 253 AQVLSSTQSLTRLLLINNKIGDLGLKLLCEGLKQPDCQLKDLALWTCHLTGACCQDLCNA 312

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L  N  +  LDL  N L D+G + L +  K     L ++ LA   + D    A+A  L  
Sbjct: 313 LYTNEHLRDLDLSDNALGDKGMQVLCEGLKHPCCKLQTLWLAECHLTDACCGALASVLNR 372

Query: 555 NEDVAVTSLNLANNFLTKFGQSALTDA 581
           N++  +T L+L+ N L  FG   L DA
Sbjct: 373 NDN--LTLLDLSGNDLKDFGVQMLCDA 397



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 167/371 (45%), Gaps = 10/371 (2%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           +  + ++       D G+  L E L   N   + +      I+ A   A   VL +N  L
Sbjct: 29  QYLTDLEFVKNTLEDSGMKLLCEGLKQPNCILQALRLYRCLISPASCGALAAVLSTNQWL 88

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEG---AKAIAELLKNNSIL 276
             L  S   +    +K LC+ L D N  +++L+L +  L +      K +A +L  N  L
Sbjct: 89  TELEFSETKLEASALKLLCEGLKDPNCKLQKLKLCASLLPENSEAVCKYLASVLICNPHL 148

Query: 277 RVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
             L+L+ N +   G   L E L   N  +  L L+  Y        L+  L+ +++L+EL
Sbjct: 149 TELDLSENPLGDIGVKYLCEGLRHSNCKLEKLDLSTCYLTQASCVELSSFLQVSQTLKEL 208

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            +  N++GD G++ L  GL   KG +  L +   S+SA     +A+ + + +SL  + L 
Sbjct: 209 FVFANALGDTGVQHLCEGLQHAKGIIENLVLSECSLSAACCEPLAQVLSSTQSLTRLLLI 268

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA--IARVLKDNSVITSLDLAYN 453
            N IGD G + + + LKQ       DL     H  GA    +   L  N  +  LDL+ N
Sbjct: 269 NNKIGDLGLKLLCEGLKQ-PDCQLKDLALWTCHLTGACCQDLCNALYTNEHLRDLDLSDN 327

Query: 454 PIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            +G  G + L E LK     + TL L  C +  +    +A +L  N+ +++LDL  N L+
Sbjct: 328 ALGDKGMQVLCEGLKHPCCKLQTLWLAECHLTDACCGALASVLNRNDNLTLLDLSGNDLK 387

Query: 513 DEGAKCLAQSF 523
           D G + L  + 
Sbjct: 388 DFGVQMLCDAL 398



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           +D+S    GD+G+  L E L +     + +  A   +T A   A   VL  N  L  L+L
Sbjct: 322 LDLSDNALGDKGMQVLCEGLKHPCCKLQTLWLAECHLTDACCGALASVLNRNDNLTLLDL 381

Query: 226 SGNPIGDEGVKCLCDILV 243
           SGN + D GV+ LCD L+
Sbjct: 382 SGNDLKDFGVQMLCDALI 399


>gi|441597766|ref|XP_004087407.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC5 [Nomascus leucogenys]
          Length = 1712

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 163/346 (47%), Gaps = 14/346 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1343 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1402

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L   + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1403 LSHLLLNSSTLALLTHGLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1462

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1463 RIGDAGVQHLATILPGLP-ELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1521

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1522 DPTALALAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPSLEEISLAENNLAGG-- 1577

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE A 
Sbjct: 1578 -----VLRFSKELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAA 1632

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
             LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1633 ELAQVLPQMGR-LKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRL 1677



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 134/297 (45%), Gaps = 7/297 (2%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+S        L  L   L +    + +    N I   G       L++  +L+ L+LS
Sbjct: 1401 LDLSHLLLNSSTLALLTHGLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLS 1460

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N IGD GV+ L  IL     + ++ LS   +   G   +AE L     L  L L  N +
Sbjct: 1461 HNRIGDAGVQHLATILPGLPELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNAL 1520

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                  +LA+ L ++  +R LHL  ++ G  GA +LA+ L+G+ SL E+ L  N++    
Sbjct: 1521 GDPTALALAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPSLEEISLAENNLAGGV 1578

Query: 347  IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            +R      S     L  +D+ +  I  + A  +     +C +L  I L  N +GDE A +
Sbjct: 1579 LR-----FSKELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAE 1633

Query: 407  IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            +A  L Q   +  +DL  N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1634 LAQVLPQMGRLKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQRL 1690



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 5/218 (2%)

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL   
Sbjct: 1347 LTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHL 1406

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
             ++S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   +IG 
Sbjct: 1407 LLNSSTLALLTHGLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNRIGD 1466

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            +G + +A +L     +  +DL  N +   G   LA+S  V+   L  + L  N + D  A
Sbjct: 1467 AGVQHLATILPGLPELRKIDLSVNSISSAGGVQLAESL-VLCRRLEELMLGCNALGDPTA 1525

Query: 546  FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
             A+AQ L  +  V    L+L  + L   G  +L  A D
Sbjct: 1526 LALAQELPQHLRV----LHLPFSHLGPGGALSLAQALD 1559



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 80/402 (19%), Positives = 149/402 (37%), Gaps = 49/402 (12%)

Query: 197  FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD------------ 244
            F    ++   +++   +L     L  ++LS N +GD G++CL + L              
Sbjct: 1106 FTGCSLSQEHVESLCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPKVPISGSLEXVES 1165

Query: 245  --NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
              N   +  +LS    R E    +A  L  +  L  L L    +       L   +   +
Sbjct: 1166 SINDKYDPRELSECSFRPEHVSRLATGLSQSLQLTELTLTQCCLGQKQLAILLSLMGRPA 1225

Query: 303  TIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             + SL +   +    G  +L +   + + S+ E+ +  +    +    L         + 
Sbjct: 1226 GLFSLRVQEPWADRAGVLSLLEVCAQASGSVTEISI--SETQQQLCVQLEFPRQEENPEA 1283

Query: 362  AVLDIGNNSISAKGAFHVAEYIKNCK-----SLLWINLYMND------------------ 398
              L + +  +    +  V + I+ C      SL  +NL  +D                  
Sbjct: 1284 VALRLAHCDLGTHHSLLVGQLIETCARLQQLSLSQVNLCEDDDASSLLLQSLLLSLSELK 1343

Query: 399  --------IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
                    +  EG   +A  L     +  +DL  N    +G  A+ R L+   ++  LDL
Sbjct: 1344 TFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDL 1403

Query: 451  AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
            ++  + +     L+  L     + +L+L    IG  G   +++ LR   ++  LDL  N 
Sbjct: 1404 SHLLLNSSTLALLTHGLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNR 1463

Query: 511  LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
            + D G + LA     + E L  IDL+ N I   G   +A++L
Sbjct: 1464 IGDAGVQHLATILPGLPE-LRKIDLSVNSISSAGGVQLAESL 1504



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 13/206 (6%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G      G+  L ++L      EEVSF  N ++   +     VL     L+ L+LS N
Sbjct: 606 LAGSKITARGISHLVKALPLCPQLEEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSN 665

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I    + CL  + V    V+ LQ    DL       I  L         L+ + ++ + 
Sbjct: 666 SICVSTLLCLARVAVTCPTVKMLQAREADL-------IFLLSPPTETTAELQRSPDLQES 718

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G    A+     S   +L L         A AL   L+    L E+ L GN + DEG R
Sbjct: 719 DGQRKGAQ-----SRSLTLRLQKCQLQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGCR 773

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAK 374
            LM+  +S+      LD+ N ++S K
Sbjct: 774 -LMAEAASQLRITRKLDLANRTLSQK 798


>gi|118359635|ref|XP_001013056.1| Protein kinase domain containing protein [Tetrahymena thermophila]
 gi|89294823|gb|EAR92811.1| Protein kinase domain containing protein [Tetrahymena thermophila
            SB210]
          Length = 1349

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 210/443 (47%), Gaps = 48/443 (10%)

Query: 146  LFRESKQTLNEFAKELRAF--SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
            + ++S +T    +KE++     ++ M  R      L  L +   YN     +    N I 
Sbjct: 667  IVKQSDETFFSNSKEMKQILQKTLLMQNRTIQIYSLMDLNKIKNYNIVT--IDLEENSIR 724

Query: 204  AAGIKAF-DGVLQS-NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
             A  K    G+ Q  NI    L+LS N IG +G K L        G+ +           
Sbjct: 725  DADAKDLATGIAQCKNIISLMLHLSQNSIGAQGAKDLA------TGIAQ----------- 767

Query: 262  GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE--ALLENSTIRSLHLNGNYGGALGA 319
              K I  L+        L+L  N I   G   LA   +L +N T  +L L GN  G +GA
Sbjct: 768  -CKNITNLM--------LDLQGNSIGAQGAKYLATGISLCKNITNLTLDLQGNSIGDVGA 818

Query: 320  NALAKGLEGNKSLRELHLH--GNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGA 376
              L+  +E  K++  L L    NSIGD+G++ L +G++  +   ++ LD+  NSI A+GA
Sbjct: 819  KHLSTVIEQCKNITSLTLDLWDNSIGDKGVKDLATGIAQCENITSLKLDLSFNSIGAQGA 878

Query: 377  FHVAEYIKNCKSL--LWINLYMNDIGDEGAEKIADALKQNRTIT--TIDLGGNNIHSKGA 432
              +A  I  CK++  L ++L  N IGDEGA+ +A  ++Q + IT  T+DL  N+I  +G+
Sbjct: 879  KDLATGIAQCKNITNLMLDLQGNSIGDEGAKDLALGIEQCKNITSLTLDLWRNSIGDQGS 938

Query: 433  SAIARVLKDNSVITSLDLAY--NPIGADGAKALSEVLKFHGNIN--TLKLGWCQIGASGA 488
              +A  ++    IT L L    N I A G K L+  +    NI   TL L    IG  GA
Sbjct: 939  KDLATGIEQCKNITCLTLYLQRNSIYAYGVKFLATAIAQCKNITSLTLHLSRNSIGDQGA 998

Query: 489  EFVADMLRYNNTIS--ILDLRANGLRDEGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGA 545
            +++   +     I+  +LDL  N +  +GAK LA+   +  N     +DL  N I D+GA
Sbjct: 999  KYLDTGIEQCKNITSLMLDLSDNSIDAQGAKDLAKGISQCKNITNLMLDLQQNSIGDEGA 1058

Query: 546  FAIAQALKANEDVAVTSLNLANN 568
              +A  +  ++++   +L+L  N
Sbjct: 1059 KDLATGIAQSKNITCLTLDLWRN 1081



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 185/390 (47%), Gaps = 46/390 (11%)

Query: 195  VSFAANGITAAGIKAF-DGVLQS-NIALKTLNLSGNPIGDEGVKCLCD--ILVDNAGVER 250
            +  + N I A G K    G+ Q  NI    L+L GN IG +G K L     L  N     
Sbjct: 746  LHLSQNSIGAQGAKDLATGIAQCKNITNLMLDLQGNSIGAQGAKYLATGISLCKNITNLT 805

Query: 251  LQLSSVDLRDEGAK---AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            L L    + D GAK    + E  KN + L  L+L +N I   G   LA  + +   I SL
Sbjct: 806  LDLQGNSIGDVGAKHLSTVIEQCKNITSL-TLDLWDNSIGDKGVKDLATGIAQCENITSL 864

Query: 308  HLNGNYG--GALGANALAKGLEGNKSLREL--HLHGNSIGDEGIRALMSGLSSRKGKLAV 363
             L+ ++   GA GA  LA G+   K++  L   L GNSIGDEG + L  G+   K   ++
Sbjct: 865  KLDLSFNSIGAQGAKDLATGIAQCKNITNLMLDLQGNSIGDEGAKDLALGIEQCKNITSL 924

Query: 364  -LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM--NDIGDEGAEKIADALKQNRTIT-- 418
             LD+  NSI  +G+  +A  I+ CK++  + LY+  N I   G + +A A+ Q + IT  
Sbjct: 925  TLDLWRNSIGDQGSKDLATGIEQCKNITCLTLYLQRNSIYAYGVKFLATAIAQCKNITSL 984

Query: 419  TIDLGGNNIHSKGASAIARVLKDNSVITSL--DLAYNPIGADGAKALSEVLKFHGNINTL 476
            T+ L  N+I  +GA  +   ++    ITSL  DL+ N I A GAK L++ +    NI  L
Sbjct: 985  TLHLSRNSIGDQGAKYLDTGIEQCKNITSLMLDLSDNSIDAQGAKDLAKGISQCKNITNL 1044

Query: 477  KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF-KVVNEALTSIDL 535
                                      +LDL+ N + DEGAK LA    +  N    ++DL
Sbjct: 1045 --------------------------MLDLQQNSIGDEGAKDLATGIAQSKNITCLTLDL 1078

Query: 536  AFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
              N I D G+  +A  ++  +++   +L+L
Sbjct: 1079 WRNSIGDQGSKYLATGIEQCKNITSLTLHL 1108



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 160/332 (48%), Gaps = 49/332 (14%)

Query: 167  VDMSGRNFGDEGLFFLAE--SLGYNQTAEEVSFAANGITAAGIKAFDGVLQS--NIALKT 222
            +D+ G + G +G  +LA   SL  N T   +    N I   G K    V++   NI   T
Sbjct: 776  LDLQGNSIGAQGAKYLATGISLCKNITNLTLDLQGNSIGDVGAKHLSTVIEQCKNITSLT 835

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLS---------------------------S 255
            L+L  N IGD+GVK L   +     +  L+L                             
Sbjct: 836  LDLWDNSIGDKGVKDLATGIAQCENITSLKLDLSFNSIGAQGAKDLATGIAQCKNITNLM 895

Query: 256  VDLR-----DEGAKAIA---ELLKNNSILRVLELNNNMIDYSGFTSLAEAL--LENSTIR 305
            +DL+     DEGAK +A   E  KN + L  L+L  N I   G   LA  +   +N T  
Sbjct: 896  LDLQGNSIGDEGAKDLALGIEQCKNITSL-TLDLWRNSIGDQGSKDLATGIEQCKNITCL 954

Query: 306  SLHLNGNYGGALGANALAKGLEGNKSLREL--HLHGNSIGDEGIRALMSGLSSRKGKLA- 362
            +L+L  N   A G   LA  +   K++  L  HL  NSIGD+G + L +G+   K   + 
Sbjct: 955  TLYLQRNSIYAYGVKFLATAIAQCKNITSLTLHLSRNSIGDQGAKYLDTGIEQCKNITSL 1014

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSL--LWINLYMNDIGDEGAEKIADALKQNRTIT-- 418
            +LD+ +NSI A+GA  +A+ I  CK++  L ++L  N IGDEGA+ +A  + Q++ IT  
Sbjct: 1015 MLDLSDNSIDAQGAKDLAKGISQCKNITNLMLDLQQNSIGDEGAKDLATGIAQSKNITCL 1074

Query: 419  TIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            T+DL  N+I  +G+  +A  ++    ITSL L
Sbjct: 1075 TLDLWRNSIGDQGSKYLATGIEQCKNITSLTL 1106



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 140/265 (52%), Gaps = 12/265 (4%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA-VLDIGNNSISAKGAFHVAEYIKNCK 387
           N ++  + L  NSI D   + L +G++  K  ++ +L +  NSI A+GA  +A  I  CK
Sbjct: 710 NYNIVTIDLEENSIRDADAKDLATGIAQCKNIISLMLHLSQNSIGAQGAKDLATGIAQCK 769

Query: 388 SL--LWINLYMNDIGDEGAEKIADALKQNRTIT--TIDLGGNNIHSKGASAIARVLKDNS 443
           ++  L ++L  N IG +GA+ +A  +   + IT  T+DL GN+I   GA  ++ V++   
Sbjct: 770 NITNLMLDLQGNSIGAQGAKYLATGISLCKNITNLTLDLQGNSIGDVGAKHLSTVIEQCK 829

Query: 444 VITS--LDLAYNPIGADGAKALSEVLKFHGNINTLK--LGWCQIGASGAEFVADMLRYNN 499
            ITS  LDL  N IG  G K L+  +    NI +LK  L +  IGA GA+ +A  +    
Sbjct: 830 NITSLTLDLWDNSIGDKGVKDLATGIAQCENITSLKLDLSFNSIGAQGAKDLATGIAQCK 889

Query: 500 TIS--ILDLRANGLRDEGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            I+  +LDL+ N + DEGAK LA    +  N    ++DL  N I D G+  +A  ++  +
Sbjct: 890 NITNLMLDLQGNSIGDEGAKDLALGIEQCKNITSLTLDLWRNSIGDQGSKDLATGIEQCK 949

Query: 557 DVAVTSLNLANNFLTKFGQSALTDA 581
           ++   +L L  N +  +G   L  A
Sbjct: 950 NITCLTLYLQRNSIYAYGVKFLATA 974



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 130/281 (46%), Gaps = 57/281 (20%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGY--NQTAEEVSFAANGITAAGIKAF-DGVLQS-NIALK 221
            ++D+   + GD+G+  LA  +    N T+ ++  + N I A G K    G+ Q  NI   
Sbjct: 835  TLDLWDNSIGDKGVKDLATGIAQCENITSLKLDLSFNSIGAQGAKDLATGIAQCKNITNL 894

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQ-LSSVDLR-------DEGAKAIA---ELL 270
             L+L GN IGDEG K L        G+E+ + ++S+ L        D+G+K +A   E  
Sbjct: 895  MLDLQGNSIGDEGAKDLA------LGIEQCKNITSLTLDLWRNSIGDQGSKDLATGIEQC 948

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEAL--LENSTIRSLHLNGNYGGALGANALAKGLEG 328
            KN + L  L L  N I   G   LA A+   +N T  +LHL+ N  G  GA  L  G+E 
Sbjct: 949  KNITCL-TLYLQRNSIYAYGVKFLATAIAQCKNITSLTLHLSRNSIGDQGAKYLDTGIEQ 1007

Query: 329  NKSLREL--------------------------------HLHGNSIGDEGIRALMSGLSS 356
             K++  L                                 L  NSIGDEG + L +G++ 
Sbjct: 1008 CKNITSLMLDLSDNSIDAQGAKDLAKGISQCKNITNLMLDLQQNSIGDEGAKDLATGIAQ 1067

Query: 357  RKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
             K    + LD+  NSI  +G+ ++A  I+ CK++  + L++
Sbjct: 1068 SKNITCLTLDLWRNSIGDQGSKYLATGIEQCKNITSLTLHL 1108



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 5/117 (4%)

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSL--LWINLY 395
            GNSIGDEG + L +G++  K    + LD+  NSI A+GA  +A  I   K++  L ++L 
Sbjct: 1203 GNSIGDEGAKDLATGIAQCKNITNLTLDLSGNSIGAQGAKDLATGISQRKNITSLTLHLQ 1262

Query: 396  MNDIGDEGAEKIADALKQNRTIT--TIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
             N IGDEGA+ +A  + Q + IT  T+DL  NNI ++    +   +     ITSL L
Sbjct: 1263 RNSIGDEGAKDLATTIVQCKNITSLTLDLLLNNIDAQNIKNLRTAIALCENITSLKL 1319



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 397  NDIGDEGAEKIADALKQNRTIT--TIDLGGNNIHSKGASAIARVLKDNSVITS--LDLAY 452
            N IGDEGA+ +A  + Q + IT  T+DL GN+I ++GA  +A  +     ITS  L L  
Sbjct: 1204 NSIGDEGAKDLATGIAQCKNITNLTLDLSGNSIGAQGAKDLATGISQRKNITSLTLHLQR 1263

Query: 453  NPIGADGAKALSEVLKFHGNINTLKL 478
            N IG +GAK L+  +    NI +L L
Sbjct: 1264 NSIGDEGAKDLATTIVQCKNITSLTL 1289



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 5/117 (4%)

Query: 311  GNYGGALGANALAKGLEGNKSLREL--HLHGNSIGDEGIRALMSGLSSRKGKLAV-LDIG 367
            GN  G  GA  LA G+   K++  L   L GNSIG +G + L +G+S RK   ++ L + 
Sbjct: 1203 GNSIGDEGAKDLATGIAQCKNITNLTLDLSGNSIGAQGAKDLATGISQRKNITSLTLHLQ 1262

Query: 368  NNSISAKGAFHVAEYIKNCKSL--LWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             NSI  +GA  +A  I  CK++  L ++L +N+I  +  + +  A+     IT++ L
Sbjct: 1263 RNSIGDEGAKDLATTIVQCKNITSLTLDLLLNNIDAQNIKNLRTAIALCENITSLKL 1319


>gi|320167612|gb|EFW44511.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 635

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/161 (42%), Positives = 99/161 (61%), Gaps = 2/161 (1%)

Query: 391 WIN-LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           W+N L  N IGD GA+ IA+ALK N T+TT++LG N I + GA AIA+ LK N+ IT L+
Sbjct: 3   WVNSLDFNQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLN 62

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L +  I   GA+ ++E LK +  + TL LG  QIG +GA+ +A+ L+ N  +  L L  N
Sbjct: 63  LQHVQISDAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNEN 122

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
            + D GA+ +A++ K VN+ L  + L  N I +    A+ Q
Sbjct: 123 QIGDAGAQAIAEALK-VNKRLILLILDENSISESAINALKQ 162



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/153 (39%), Positives = 87/153 (56%)

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA  +AE +K   ++  +NL  N IG+ GA+ IA ALK N TIT ++L    I 
Sbjct: 10  NQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQIS 69

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA  IA  LK N+ +T+L L  N IG  GA+A++E LK +  ++TL L   QIG +GA
Sbjct: 70  DAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAGA 129

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           + +A+ L+ N  + +L L  N + +     L Q
Sbjct: 130 QAIAEALKVNKRLILLILDENSISESAINALKQ 162



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 83/132 (62%), Gaps = 1/132 (0%)

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N I   GA AIA  LK N+ +T+L+L  N IG  GA+A+++ LK +  I  L L   QI 
Sbjct: 10  NQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQIS 69

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
            +GA+ +A+ L+ N T++ L L  N + D GA+ +A++ KV N+ L ++ L  N+I D G
Sbjct: 70  DAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKV-NKKLDTLFLNENQIGDAG 128

Query: 545 AFAIAQALKANE 556
           A AIA+ALK N+
Sbjct: 129 AQAIAEALKVNK 140



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 79/151 (52%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N I   G +A    L+ N  + TLNL  N IG+ G + +   L  N  +  L L  V + 
Sbjct: 10  NQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQIS 69

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+ IAE LK N+ L  L L  N I  +G  ++AEAL  N  + +L LN N  G  GA
Sbjct: 70  DAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAGA 129

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            A+A+ L+ NK L  L L  NSI +  I AL
Sbjct: 130 QAIAEALKVNKRLILLILDENSISESAINAL 160



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/137 (40%), Positives = 84/137 (61%), Gaps = 5/137 (3%)

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           + SLD  +N IG  GA+A++E LK +  + TL LG  QIG +GA+ +A  L+ N TI+ L
Sbjct: 4   VNSLD--FNQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGL 61

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           +L+   + D GA+ +A++ KV N  LT++ L  N+I D GA AIA+ALK N+ +    LN
Sbjct: 62  NLQHVQISDAGAQTIAEALKV-NTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLN 120

Query: 565 LANNFLTKFGQSALTDA 581
              N +   G  A+ +A
Sbjct: 121 --ENQIGDAGAQAIAEA 135



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 74/129 (57%), Gaps = 1/129 (0%)

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G +A+   L      +  L++G+N I   GA  +A+ +K   ++  +NL    I
Sbjct: 10  NQIGDVGAQAIAEALKVNT-TVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQI 68

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            D GA+ IA+ALK N T+TT+ LG N I   GA AIA  LK N  + +L L  N IG  G
Sbjct: 69  SDAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAG 128

Query: 460 AKALSEVLK 468
           A+A++E LK
Sbjct: 129 AQAIAEALK 137



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 1/149 (0%)

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N IGD G + + + L  N  V  L L    + + GA+AIA+ LK N+ +  L L +
Sbjct: 6   SLDFNQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQH 65

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             I  +G  ++AEAL  N+T+ +L L  N  G  GA A+A+ L+ NK L  L L+ N IG
Sbjct: 66  VQISDAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIG 125

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
           D G +A+   L   K +L +L +  NSIS
Sbjct: 126 DAGAQAIAEALKVNK-RLILLILDENSIS 153



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 84/158 (53%), Gaps = 1/158 (0%)

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N  G +GA A+A+ L+ N ++  L+L  N IG+ G +A+   L      +  L++ +
Sbjct: 7   LDFNQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNT-TITGLNLQH 65

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
             IS  GA  +AE +K   +L  + L  N IGD GA+ IA+ALK N+ + T+ L  N I 
Sbjct: 66  VQISDAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIG 125

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
             GA AIA  LK N  +  L L  N I      AL +V
Sbjct: 126 DAGAQAIAEALKVNKRLILLILDENSISESAINALKQV 163



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 1/158 (0%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L+ N I   G  ++AEAL  N+T+ +L+L  N  G  GA A+A+ L+ N ++  L+L   
Sbjct: 7   LDFNQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHV 66

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            I D G + +   L      L  L +G N I   GA  +AE +K  K L  + L  N IG
Sbjct: 67  QISDAGAQTIAEALKVNT-TLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIG 125

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           D GA+ IA+ALK N+ +  + L  N+I     +A+ +V
Sbjct: 126 DAGAQAIAEALKVNKRLILLILDENSISESAINALKQV 163



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 72/152 (47%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             GD G   +AE+L  N T   ++   N I  AG +A    L+ N  +  LNL    I D
Sbjct: 11  QIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQISD 70

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + + + L  N  +  L L    + D GA+AIAE LK N  L  L LN N I  +G  
Sbjct: 71  AGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAGAQ 130

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           ++AEAL  N  +  L L+ N       NAL +
Sbjct: 131 AIAEALKVNKRLILLILDENSISESAINALKQ 162



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 71/145 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     +++++     G+ G   +A++L  N T   ++     I+ AG +   
Sbjct: 18  QAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQISDAGAQTIA 77

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L TL L  N IGD G + + + L  N  ++ L L+   + D GA+AIAE LK
Sbjct: 78  EALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAGAQAIAEALK 137

Query: 272 NNSILRVLELNNNMIDYSGFTSLAE 296
            N  L +L L+ N I  S   +L +
Sbjct: 138 VNKRLILLILDENSISESAINALKQ 162


>gi|255552321|ref|XP_002517205.1| leucine rich repeat-containing protein, putative [Ricinus communis]
 gi|223543840|gb|EEF45368.1| leucine rich repeat-containing protein, putative [Ricinus communis]
          Length = 549

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 140/270 (51%), Gaps = 1/270 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L+S   L+ L L  + I +E  + +C+++     +  L   +    
Sbjct: 234 NALGEKGVRAFGALLRSQSCLEELYLMNDGISEEAARAVCELIPSTEKLRILHFHNNMTG 293

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA AIAE+LK +++L     ++  I   G  +L+EAL   S ++ L L  N  G    
Sbjct: 294 DPGALAIAEVLKRSALLEDFRCSSTRIGAEGGIALSEALETCSHLKKLDLRDNVFGVEAG 353

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL+K L  +  L E++L   ++ DEG  A+ + L      L VLD+  N I+A+ A  V
Sbjct: 354 VALSKVLPKHAGLTEVYLSYLNLEDEGAIAIANALKESAPALEVLDMAGNDITAEAAPVV 413

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARV 438
           +  ++  ++L+ +NL  N++ DEGA +I+ AL++    +  +D+  N+I   GA  +A+V
Sbjct: 414 SACVELKQNLIKLNLAENELKDEGAIQISKALEEGHVQLKEVDMSTNSIGRVGARVLAQV 473

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +        L++  N I  +G   + E+ K
Sbjct: 474 MVQKPEFKLLNINENCISDEGIDEVKEIFK 503



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 158/336 (47%), Gaps = 32/336 (9%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F   L+ +I LK+L+LS N +G++GV+    +L   + +E L L +  + +E A+A+ EL
Sbjct: 217 FSAALEGSI-LKSLDLSNNALGEKGVRAFGALLRSQSCLEELYLMNDGISEEAARAVCEL 275

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           + +   LR+L  +NNM    G  ++AE L  ++ +     +    GA G  AL++ LE  
Sbjct: 276 IPSTEKLRILHFHNNMTGDPGALAIAEVLKRSALLEDFRCSSTRIGAEGGIALSEALETC 335

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             L++L L  N  G E   AL   L    G   V                         L
Sbjct: 336 SHLKKLDLRDNVFGVEAGVALSKVLPKHAGLTEVY------------------------L 371

Query: 390 LWINLYMNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            ++NL      DEGA  IA+ALK++   +  +D+ GN+I ++ A  ++  ++    +  L
Sbjct: 372 SYLNLE-----DEGAIAIANALKESAPALEVLDMAGNDITAEAAPVVSACVELKQNLIKL 426

Query: 449 DLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           +LA N +  +GA  +S+ L+  H  +  + +    IG  GA  +A ++       +L++ 
Sbjct: 427 NLAENELKDEGAIQISKALEEGHVQLKEVDMSTNSIGRVGARVLAQVMVQKPEFKLLNIN 486

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
            N + DEG   + + FK   E L  +D    E  DD
Sbjct: 487 ENCISDEGIDEVKEIFKKCPEMLGPLDENNPEGPDD 522



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 4/279 (1%)

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           A LE S ++SL L+ N  G  G  A    L     L EL+L  + I +E  RA+   + S
Sbjct: 219 AALEGSILKSLDLSNNALGEKGVRAFGALLRSQSCLEELYLMNDGISEEAARAVCELIPS 278

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
            + KL +L   NN     GA  +AE +K    L         IG EG   +++AL+    
Sbjct: 279 TE-KLRILHFHNNMTGDPGALAIAEVLKRSALLEDFRCSSTRIGAEGGIALSEALETCSH 337

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INT 475
           +  +DL  N    +   A+++VL  ++ +T + L+Y  +  +GA A++  LK     +  
Sbjct: 338 LKKLDLRDNVFGVEAGVALSKVLPKHAGLTEVYLSYLNLEDEGAIAIANALKESAPALEV 397

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
           L +    I A  A  V+  +     +  L+L  N L+DEGA  ++++ +  +  L  +D+
Sbjct: 398 LDMAGNDITAEAAPVVSACVELKQNLIKLNLAENELKDEGAIQISKALEEGHVQLKEVDM 457

Query: 536 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           + N I   GA  +AQ +    +  +  LN+  N ++  G
Sbjct: 458 STNSIGRVGARVLAQVMVQKPEFKL--LNINENCISDEG 494



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 136/307 (44%), Gaps = 32/307 (10%)

Query: 139 LSGF-TGKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F+  L      S+D+S    G++G+      L      EE+
Sbjct: 198 LSDFIAGRPEEEALDVMNIFSAALEGSILKSLDLSNNALGEKGVRAFGALLRSQSCLEEL 257

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+    +A   ++ S   L+ L+   N  GD G   + ++L  +A +E  + SS
Sbjct: 258 YLMNDGISEEAARAVCELIPSTEKLRILHFHNNMTGDPGALAIAEVLKRSALLEDFRCSS 317

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNM----------------------------ID 287
             +  EG  A++E L+  S L+ L+L +N+                            ++
Sbjct: 318 TRIGAEGGIALSEALETCSHLKKLDLRDNVFGVEAGVALSKVLPKHAGLTEVYLSYLNLE 377

Query: 288 YSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             G  ++A AL E++  +  L + GN   A  A  ++  +E  ++L +L+L  N + DEG
Sbjct: 378 DEGAIAIANALKESAPALEVLDMAGNDITAEAAPVVSACVELKQNLIKLNLAENELKDEG 437

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
              +   L     +L  +D+  NSI   GA  +A+ +        +N+  N I DEG ++
Sbjct: 438 AIQISKALEEGHVQLKEVDMSTNSIGRVGARVLAQVMVQKPEFKLLNINENCISDEGIDE 497

Query: 407 IADALKQ 413
           + +  K+
Sbjct: 498 VKEIFKK 504



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 32/262 (12%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG+  L+ L L  N++G++G+RA  + L S+   L  L + N+ IS + A  V
Sbjct: 215 NIFSAALEGS-ILKSLDLSNNALGEKGVRAFGALLRSQSC-LEELYLMNDGISEEAARAV 272

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E I + + L  ++ + N  GD                             GA AIA VL
Sbjct: 273 CELIPSTEKLRILHFHNNMTGD----------------------------PGALAIAEVL 304

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           K ++++     +   IGA+G  ALSE L+   ++  L L     G      ++ +L  + 
Sbjct: 305 KRSALLEDFRCSSTRIGAEGGIALSEALETCSHLKKLDLRDNVFGVEAGVALSKVLPKHA 364

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
            ++ + L    L DEGA  +A + K    AL  +D+A N+I  + A  ++  ++  ++  
Sbjct: 365 GLTEVYLSYLNLEDEGAIAIANALKESAPALEVLDMAGNDITAEAAPVVSACVELKQN-- 422

Query: 560 VTSLNLANNFLTKFGQSALTDA 581
           +  LNLA N L   G   ++ A
Sbjct: 423 LIKLNLAENELKDEGAIQISKA 444


>gi|395839413|ref|XP_003792584.1| PREDICTED: LOW QUALITY PROTEIN: nucleotide-binding oligomerization
            domain-containing protein 2 [Otolemur garnettii]
          Length = 1039

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 139/288 (48%), Gaps = 17/288 (5%)

Query: 283  NNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYGGALGAN--ALAKGLEGNK 330
             +M    GF  L  +L E          +R L   HL   + G   A   ALA  L+  +
Sbjct: 730  KSMHAMPGFVWLIRSLYEMQEERLAREAVRRLKVGHLKLTFCGVGPAECAALAFVLQHLR 789

Query: 331  SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
                L L  NS+GD G+  L+  LS  K     L + +N+IS +G   + E    C+ L 
Sbjct: 790  RPVALQLDYNSVGDIGVEQLLPCLSVCKA----LYLRDNNISDRGICTLVERAVRCEPLQ 845

Query: 391  WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
             + L+ N + D  A  +A  L   R    + LG N+I + GA  +A  L+ N+ +  L L
Sbjct: 846  KLALFNNKLTDGCAHSMAKLLACKRNFLALRLGNNHITAAGAQMLAEGLRANTSLQFLGL 905

Query: 451  AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
              N +G +GA+AL+E L  H ++  L L    IG+ GA  +A ML  N T+  L L  N 
Sbjct: 906  WGNRVGDEGARALAEALSDHQSLKWLSLVGNNIGSVGAHALAHMLEKNTTLEELCLEENH 965

Query: 511  LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            L+DEG   LA++ K  N +L  + L+ N +   GA A+ QAL  N+ +
Sbjct: 966  LQDEGVCSLAEALK-RNSSLRVLKLSNNCVTYLGAEALLQALARNDTI 1012



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 141/279 (50%), Gaps = 4/279 (1%)

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            V    V  L+L+   +      A+A +L++      L+L+ N +   G   L   L   S
Sbjct: 758  VRRLKVGHLKLTFCGVGPAECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---S 814

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
              ++L+L  N     G   L +     + L++L L  N + D    ++   L+ ++  LA
Sbjct: 815  VCKALYLRDNNISDRGICTLVERAVRCEPLQKLALFNNKLTDGCAHSMAKLLACKRNFLA 874

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +GNN I+A GA  +AE ++   SL ++ L+ N +GDEGA  +A+AL  ++++  + L
Sbjct: 875  -LRLGNNHITAAGAQMLAEGLRANTSLQFLGLWGNRVGDEGARALAEALSDHQSLKWLSL 933

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             GNNI S GA A+A +L+ N+ +  L L  N +  +G  +L+E LK + ++  LKL    
Sbjct: 934  VGNNIGSVGAHALAHMLEKNTTLEELCLEENHLQDEGVCSLAEALKRNSSLRVLKLSNNC 993

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            +   GAE +   L  N+TI  + LR N    E  + L+ 
Sbjct: 994  VTYLGAEALLQALARNDTILEVWLRGNTFSGEEIETLSH 1032



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 90/162 (55%), Gaps = 4/162 (2%)

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N ITAAG +     L++N +L+ L L GN +GDEG + L + L D+  ++ L L   ++ 
Sbjct: 880  NHITAAGAQMLAEGLRANTSLQFLGLWGNRVGDEGARALAEALSDHQSLKWLSLVGNNIG 939

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
              GA A+A +L+ N+ L  L L  N +   G  SLAEAL  NS++R L L+ N    LGA
Sbjct: 940  SVGAHALAHMLEKNTTLEELCLEENHLQDEGVCSLAEALKRNSSLRVLKLSNNCVTYLGA 999

Query: 320  NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             AL + L  N ++ E+ L GN+   E I      LS R G+L
Sbjct: 1000 EALLQALARNDTILEVWLRGNTFSGEEIET----LSHRDGRL 1037



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 103/207 (49%), Gaps = 1/207 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  V    +++L L +  L D  A ++A+LL        L 
Sbjct: 817  KALYLRDNNISDRGICTLVERAVRCEPLQKLALFNNKLTDGCAHSMAKLLACKRNFLALR 876

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G   LAE L  N++++ L L GN  G  GA ALA+ L  ++SL+ L L GN
Sbjct: 877  LGNNHITAAGAQMLAEGLRANTSLQFLGLWGNRVGDEGARALAEALSDHQSLKWLSLVGN 936

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +IG  G  AL   L  +   L  L +  N +  +G   +AE +K   SL  + L  N + 
Sbjct: 937  NIGSVGAHALAHML-EKNTTLEELCLEENHLQDEGVCSLAEALKRNSSLRVLKLSNNCVT 995

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNI 427
              GAE +  AL +N TI  + L GN  
Sbjct: 996  YLGAEALLQALARNDTILEVWLRGNTF 1022



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 86/174 (49%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     R F ++ +   +    G   LAE L  N + + +   
Sbjct: 847  LALFNNKLTDGCAHSMAKLLACKRNFLALRLGNNHITAAGAQMLAEGLRANTSLQFLGLW 906

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A    L  + +LK L+L GN IG  G   L  +L  N  +E L L    L
Sbjct: 907  GNRVGDEGARALAEALSDHQSLKWLSLVGNNIGSVGAHALAHMLEKNTTLEELCLEENHL 966

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            +DEG  ++AE LK NS LRVL+L+NN + Y G  +L +AL  N TI  + L GN
Sbjct: 967  QDEGVCSLAEALKRNSSLRVLKLSNNCVTYLGAEALLQALARNDTILEVWLRGN 1020



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 89/197 (45%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E     +  ++++   N +T     +   +L        L L  N I  
Sbjct: 825  NISDRGICTLVERAVRCEPLQKLALFNNKLTDGCAHSMAKLLACKRNFLALRLGNNHITA 884

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  N  ++ L L    + DEGA+A+AE L ++  L+ L L  N I   G  
Sbjct: 885  AGAQMLAEGLRANTSLQFLGLWGNRVGDEGARALAEALSDHQSLKWLSLVGNNIGSVGAH 944

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA  L +N+T+  L L  N+    G  +LA+ L+ N SLR L L  N +   G  AL+ 
Sbjct: 945  ALAHMLEKNTTLEELCLEENHLQDEGVCSLAEALKRNSSLRVLKLSNNCVTYLGAEALLQ 1004

Query: 353  GLSSRKGKLAVLDIGNN 369
             L+     L V   GN 
Sbjct: 1005 ALARNDTILEVWLRGNT 1021


>gi|326426976|gb|EGD72546.1| hypothetical protein PTSG_11612 [Salpingoeca sp. ATCC 50818]
          Length = 1979

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 166/334 (49%), Gaps = 23/334 (6%)

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K L + + + +   R+ L    L   GA A+A  L  N+ L  L L+NN +   G   +A
Sbjct: 54  KELIEAIANGSCAARISLEGASLGPTGAGALAVALSVNTNLERLNLDNNTLGPQGAARVA 113

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           +A+  +++++ L L  N  G  GA + A  L+ N SL  + L+ N+IG +G RAL + + 
Sbjct: 114 DAIATHTSLQWLSLFNNDIGDEGAGSFAAALQQNNSLYVIRLNCNNIGPDGGRALGTAM- 172

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVA---EYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            +  KL  + +  NSI A   F  A   E +  C          ND+ ++  + + DA +
Sbjct: 173 EKNSKLTQITLWGNSIDAIREFGAALPPERMMQC----------NDLSNDERDALDDARE 222

Query: 413 QNRT--ITTIDLGG----NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           + RT  +   +LG      ++  K   +I  + K+N    + DL Y P+   GA+ L+  
Sbjct: 223 EKRTHHLNWDNLGAMLKQQSLKPKTRRSIQAIAKNN--CAAADLNYTPLHTQGARVLALA 280

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
           L+  G +  L+L   ++G +GA  +A  L+++ ++  L L++  ++DEGA  +A + +  
Sbjct: 281 LRDSGRLQELELDGTRLGPTGAAILAAALKHHTSLLRLSLQSANVQDEGAMAIAGALR-K 339

Query: 527 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           N  L  I L  N I   GA A+A A+K N  + V
Sbjct: 340 NNTLERILLGSNYISRPGANALANAMKTNTSLKV 373



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 174/402 (43%), Gaps = 56/402 (13%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           L E++     A  +S     +   G  A    L  N  L+ LNL  N +G +G   + D 
Sbjct: 56  LIEAIANGSCAARISLEGASLGPTGAGALAVALSVNTNLERLNLDNNTLGPQGAARVADA 115

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           +  +  ++ L L + D+ DEGA + A  L+ N+ L V+ LN N I   G  +L  A+ +N
Sbjct: 116 IATHTSLQWLSLFNNDIGDEGAGSFAAALQQNNSLYVIRLNCNNIGPDGGRALGTAMEKN 175

Query: 302 STIRSLHLNGN-------YGGALGANALAKG-----------LEGNKSLRELHLHGNSIG 343
           S +  + L GN       +G AL    + +             +  +  R  HL+ +++G
Sbjct: 176 SKLTQITLWGNSIDAIREFGAALPPERMMQCNDLSNDERDALDDAREEKRTHHLNWDNLG 235

Query: 344 -----------------------------------DEGIRALMSGLSSRKGKLAVLDIGN 368
                                               +G R L   L    G+L  L++  
Sbjct: 236 AMLKQQSLKPKTRRSIQAIAKNNCAAADLNYTPLHTQGARVLALALRD-SGRLQELELDG 294

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
             +   GA  +A  +K+  SLL ++L   ++ DEGA  IA AL++N T+  I LG N I 
Sbjct: 295 TRLGPTGAAILAAALKHHTSLLRLSLQSANVQDEGAMAIAGALRKNNTLERILLGSNYIS 354

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA+A+A  +K N+ +  + +  N IG  GA A +  L+ +  ++ L L   +I A+G 
Sbjct: 355 RPGANALANAMKTNTSLKVMFVDRNRIGDKGAIAFARALQDNSTLSHLLLYENRITANGG 414

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGA--KCLAQSFKVVNE 528
             +   L  N T+  L L+ NG     A  + L  + +VV E
Sbjct: 415 RTLGLALHTNKTLQQLSLQGNGKETAAAFGRALPPNRQVVIE 456



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 172/435 (39%), Gaps = 60/435 (13%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG- 231
           + GDEG    A +L  N +   +    N I   G +A    ++ N  L  + L GN I  
Sbjct: 131 DIGDEGAGSFAAALQQNNSLYVIRLNCNNIGPDGGRALGTAMEKNSKLTQITLWGNSIDA 190

Query: 232 ----------DEGVKC------LCDILVDNAGVERLQ----------LSSVDLRDEGAKA 265
                     +  ++C        D L D    +R            L    L+ +  ++
Sbjct: 191 IREFGAALPPERMMQCNDLSNDERDALDDAREEKRTHHLNWDNLGAMLKQQSLKPKTRRS 250

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           I  + KNN      +LN   +   G   LA AL ++  ++ L L+G   G  GA  LA  
Sbjct: 251 IQAIAKNNCA--AADLNYTPLHTQGARVLALALRDSGRLQELELDGTRLGPTGAAILAAA 308

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ + SL  L L   ++ DEG  A+   L  +   L  + +G+N IS  GA  +A  +K 
Sbjct: 309 LKHHTSLLRLSLQSANVQDEGAMAIAGALR-KNNTLERILLGSNYISRPGANALANAMKT 367

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             SL  + +  N IGD+GA   A AL+ N T++ + L  N I + G   +   L  N  +
Sbjct: 368 NTSLKVMFVDRNRIGDKGAIAFARALQDNSTLSHLLLYENRITANGGRTLGLALHTNKTL 427

Query: 446 TSLDLAYNPIGADGAKALSE--------VLKFHGN-INTLKLGWCQIGASGAEF-VADML 495
             L L  N  G + A A           V++F    +N  K    Q    G E  +AD+ 
Sbjct: 428 QQLSLQGN--GKETAAAFGRALPPNRQVVIEFAAEELNAYKNARAQTMTEGPEQQIADLE 485

Query: 496 RYNNTISILDLRANGLRDEGA-KCLAQSF-----------------KVVNEALTSIDLAF 537
           +  +   + +   + LR   A  C A  F                    N  + ++DL  
Sbjct: 486 KALSESDLNEATMSKLRSISANTCNAAVFFDGVRLGEPEAKALAQALKANTCIVNLDLDN 545

Query: 538 NEIRDDGAFAIAQAL 552
             + D G  A+A A+
Sbjct: 546 THLGDTGVIALADAI 560



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 169/388 (43%), Gaps = 9/388 (2%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           ++ D++      +G   LA +L  +   +E+      +   G       L+ + +L  L+
Sbjct: 260 AAADLNYTPLHTQGARVLALALRDSGRLQELELDGTRLGPTGAAILAAALKHHTSLLRLS 319

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L    + DEG   +   L  N  +ER+ L S  +   GA A+A  +K N+ L+V+ ++ N
Sbjct: 320 LQSANVQDEGAMAIAGALRKNNTLERILLGSNYISRPGANALANAMKTNTSLKVMFVDRN 379

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G  + A AL +NST+  L L  N   A G   L   L  NK+L++L L GN  G 
Sbjct: 380 RIGDKGAIAFARALQDNSTLSHLLLYENRITANGGRTLGLALHTNKTLQQLSLQGN--GK 437

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKG---AFHVAEYIKNCKSLLWINLYMNDIGD 401
           E   A    L   +    V++     ++A     A  + E  +   + L   L  +D+ +
Sbjct: 438 ETAAAFGRALPPNRQ--VVIEFAAEELNAYKNARAQTMTEGPEQQIADLEKALSESDLNE 495

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
               K+  ++  N     +   G  +    A A+A+ LK N+ I +LDL    +G  G  
Sbjct: 496 ATMSKLR-SISANTCNAAVFFDGVRLGEPEAKALAQALKANTCIVNLDLDNTHLGDTGVI 554

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           AL++ +  H  +  + L    IG  GA   A  ++ + ++    +  N +   G + LA+
Sbjct: 555 ALADAIANHPRLRWVSLYKNNIGDDGAVAFARAIQTSTSLCSARINCNHVGAAGGRALAE 614

Query: 522 SFKVVNEALTSIDLAFNEIRDDGAFAIA 549
           +    N++ T I +  N +    AF  A
Sbjct: 615 AMN-ANKSFTHITMWGNSVEAVRAFGTA 641


>gi|350585452|ref|XP_003356134.2| PREDICTED: NACHT, LRR and PYD domains-containing protein 5-like [Sus
            scrofa]
          Length = 1056

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 188/404 (46%), Gaps = 18/404 (4%)

Query: 189  NQTAEEVSFAANGITAAGIKAFD-------GVLQSNIALKTLNLSGNPIGDEGVKCLC-D 240
            ++ AE  S A +G+    IK  D        VL ++  L+ L+LSG+ + ++ +K LC  
Sbjct: 605  DEGAEAWSRAPHGLQ---IKTLDEHWEDLCSVLSTHPNLQHLDLSGSILSEQAMKTLCIK 661

Query: 241  ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            +      ++ L   S  +   G + +   L  N  ++ L+L +  +         EA+  
Sbjct: 662  LRQPTCKIKNLIFKSAQV-TPGLRHLWVTLVINRKIKYLDLESTRLKEEDVVMACEAIKH 720

Query: 301  -NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
             N  + SL L+          AL++ L  + SL+ L L GN + D  I+ L   L S + 
Sbjct: 721  PNCQLESLRLDRCGLTHSSCLALSQVLVTSVSLKSLSLAGNKVTDPSIKPLCDALRSTQC 780

Query: 360  KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTIT 418
             L  L +G+  ++A  +  +A  +   +SL  + L  N +G EG   +  A+K  N ++ 
Sbjct: 781  TLQKLILGDCGLTAADSQDLASALTKNQSLTHLYLASNSLGSEGVNLLGRAMKLPNCSLQ 840

Query: 419  TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-KFHGNINTLK 477
             + L   N+   G   +A  L  N  +T L L+ NP+  DG K L EV+ +   ++  L+
Sbjct: 841  RLILNACNLDVAGCGFLAFALMGNRRLTHLSLSVNPLEDDGMKLLCEVMMEPSCHLQDLE 900

Query: 478  LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
            L  CQ+ A+  + ++ ++  N  +  LDL AN L D G + L +  K  N +L  + L  
Sbjct: 901  LVKCQLTATCCKSLSHVITRNKHLQSLDLAANALGDNGIEVLCEGLKQKN-SLRRLGLEA 959

Query: 538  NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             E+      A++ AL  +E   +TSLNL  N  +  G + L  A
Sbjct: 960  CELTSGCCEALSSALSGSEH--LTSLNLMQNNFSLGGMTKLCSA 1001



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 137/306 (44%), Gaps = 3/306 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           R    +D+      +E +    E++ + N   E +     G+T +   A   VL ++++L
Sbjct: 694 RKIKYLDLESTRLKEEDVVMACEAIKHPNCQLESLRLDRCGLTHSSCLALSQVLVTSVSL 753

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           K+L+L+GN + D  +K LCD L      +++L L    L    ++ +A  L  N  L  L
Sbjct: 754 KSLSLAGNKVTDPSIKPLCDALRSTQCTLQKLILGDCGLTAADSQDLASALTKNQSLTHL 813

Query: 280 ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L +N +   G   L  A+ L N +++ L LN       G   LA  L GN+ L  L L 
Sbjct: 814 YLASNSLGSEGVNLLGRAMKLPNCSLQRLILNACNLDVAGCGFLAFALMGNRRLTHLSLS 873

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N + D+G++ L   +      L  L++    ++A     ++  I   K L  ++L  N 
Sbjct: 874 VNPLEDDGMKLLCEVMMEPSCHLQDLELVKCQLTATCCKSLSHVITRNKHLQSLDLAANA 933

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +GD G E + + LKQ  ++  + L    + S    A++  L  +  +TSL+L  N     
Sbjct: 934 LGDNGIEVLCEGLKQKNSLRRLGLEACELTSGCCEALSSALSGSEHLTSLNLMQNNFSLG 993

Query: 459 GAKALS 464
           G   L 
Sbjct: 994 GMTKLC 999



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 169/383 (44%), Gaps = 12/383 (3%)

Query: 152  QTLNEFAKELRAFSS-------VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGIT 203
            +TL+E  ++L +  S       +D+SG    ++ +  L   L       + + F +  +T
Sbjct: 621  KTLDEHWEDLCSVLSTHPNLQHLDLSGSILSEQAMKTLCIKLRQPTCKIKNLIFKSAQVT 680

Query: 204  AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEG 262
              G++     L  N  +K L+L    + +E V   C+ I   N  +E L+L    L    
Sbjct: 681  P-GLRHLWVTLVINRKIKYLDLESTRLKEEDVVMACEAIKHPNCQLESLRLDRCGLTHSS 739

Query: 263  AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA 321
              A++++L  +  L+ L L  N +       L +AL     T++ L L      A  +  
Sbjct: 740  CLALSQVLVTSVSLKSLSLAGNKVTDPSIKPLCDALRSTQCTLQKLILGDCGLTAADSQD 799

Query: 322  LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            LA  L  N+SL  L+L  NS+G EG+  L   +      L  L +   ++   G   +A 
Sbjct: 800  LASALTKNQSLTHLYLASNSLGSEGVNLLGRAMKLPNCSLQRLILNACNLDVAGCGFLAF 859

Query: 382  YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLK 440
             +   + L  ++L +N + D+G + + + + +    +  ++L    + +    +++ V+ 
Sbjct: 860  ALMGNRRLTHLSLSVNPLEDDGMKLLCEVMMEPSCHLQDLELVKCQLTATCCKSLSHVIT 919

Query: 441  DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
             N  + SLDLA N +G +G + L E LK   ++  L L  C++ +   E ++  L  +  
Sbjct: 920  RNKHLQSLDLAANALGDNGIEVLCEGLKQKNSLRRLGLEACELTSGCCEALSSALSGSEH 979

Query: 501  ISILDLRANGLRDEGAKCLAQSF 523
            ++ L+L  N     G   L  +F
Sbjct: 980  LTSLNLMQNNFSLGGMTKLCSAF 1002



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 1/143 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R  + + +S     D+G+  L E +       +++      +TA   K+   V+  N  L
Sbjct: 865  RRLTHLSLSVNPLEDDGMKLLCEVMMEPSCHLQDLELVKCQLTATCCKSLSHVITRNKHL 924

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            ++L+L+ N +GD G++ LC+ L     + RL L + +L     +A++  L  +  L  L 
Sbjct: 925  QSLDLAANALGDNGIEVLCEGLKQKNSLRRLGLEACELTSGCCEALSSALSGSEHLTSLN 984

Query: 281  LNNNMIDYSGFTSLAEALLENST 303
            L  N     G T L  A  + + 
Sbjct: 985  LMQNNFSLGGMTKLCSAFAQPTC 1007


>gi|403347321|gb|EJY73081.1| Leucine Rich Repeat family protein [Oxytricha trifallax]
          Length = 825

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 181/381 (47%), Gaps = 11/381 (2%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           L++ +  NQ    +    N +   G+K     +  +  +  L+LS N I  +G K +   
Sbjct: 240 LSQIIAVNQNIAHIDLKKNLLGDEGVKILIKAISKSKNIVHLDLSSNQITHKGAKKIFTS 299

Query: 242 LVDNAGVERLQLSSVD------LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           L+ N  +  L+L S+D      +  +G + +  LL+++  L+ L+L +N++  +G  +L 
Sbjct: 300 LLPNCSLISLKLGSIDGVNKNKVGQKGVQHLIPLLQHSKFLQFLDLRSNILSDNGIVTLC 359

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           +AL +N T+ SL+L  N   + G   L   L     L EL L GN +G++GI  L   +S
Sbjct: 360 DALFQNKTLVSLNLGSNEITSYGMERLKDALLTT-VLNELDLTGNPLGNQGIDYLGQYMS 418

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                L  L+I      + G+  + + ++ C SL  + L  ND+    +  +   +    
Sbjct: 419 HADCNLVRLNISECRFQSPGSILLFQAVRKCSSLKHLILDKNDLKSRNSSYLTTGIYHG- 477

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-KFHGNIN 474
            +T + +   N+      ++A  L  +  + +L L YN +  + AK L+E L K   NI 
Sbjct: 478 -LTYLSMIRCNLGDDEGISVAEGLSRSRQLKALILQYNSLSDEAAKTLAEALAKPTVNIE 536

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
            L L   +I  +G E +A  L  N+++S L+L++N L++      A+S K  N  +  +D
Sbjct: 537 HLDLSHNKINDAGGELIAISLGQNSSLSKLNLKSNNLKETTGSLFAKSVK-QNSQIQFLD 595

Query: 535 LAFNEIRDDGAFAIAQALKAN 555
           L+ N +  +    I Q L+ N
Sbjct: 596 LSKNSVPVNFIEDIEQQLQVN 616



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 157/372 (42%), Gaps = 70/372 (18%)

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           T L++ +  N  I  + L  N  G  G   L K +  +K++  L L  N I  +G + + 
Sbjct: 238 TELSQIIAVNQNIAHIDLKKNLLGDEGVKILIKAISKSKNIVHLDLSSNQITHKGAKKIF 297

Query: 352 SGL----SSRKGKLAVLD-IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           + L    S    KL  +D +  N +  KG  H+   +++ K L +++L  N + D G   
Sbjct: 298 TSLLPNCSLISLKLGSIDGVNKNKVGQKGVQHLIPLLQHSKFLQFLDLRSNILSDNGIVT 357

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           + DAL QN+T+ +++LG N I S G   +   L   +V+  LDL  NP+G  G   L + 
Sbjct: 358 LCDALFQNKTLVSLNLGSNEITSYGMERLKDALL-TTVLNELDLTGNPLGNQGIDYLGQY 416

Query: 467 LKFHGNINTLKL--GWCQIGASGA--------------EFVAD----------------- 493
           +  H + N ++L    C+  + G+                + D                 
Sbjct: 417 MS-HADCNLVRLNISECRFQSPGSILLFQAVRKCSSLKHLILDKNDLKSRNSSYLTTGIY 475

Query: 494 -------MLRYN----------------NTISILDLRANGLRDEGAKCLAQSFKVVNEAL 530
                  M+R N                  +  L L+ N L DE AK LA++       +
Sbjct: 476 HGLTYLSMIRCNLGDDEGISVAEGLSRSRQLKALILQYNSLSDEAAKTLAEALAKPTVNI 535

Query: 531 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK-----FGQSALTDAKDLV 585
             +DL+ N+I D G   IA +L  N   +++ LNL +N L +     F +S   +++   
Sbjct: 536 EHLDLSHNKINDAGGELIAISLGQNS--SLSKLNLKSNNLKETTGSLFAKSVKQNSQIQF 593

Query: 586 YEMSEKEVNIFF 597
            ++S+  V + F
Sbjct: 594 LDLSKNSVPVNF 605



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 150/334 (44%), Gaps = 36/334 (10%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+      D G+  L ++L  N+T   ++  +N IT+ G++     L + + L  L+L+
Sbjct: 343 LDLRSNILSDNGIVTLCDALFQNKTLVSLNLGSNEITSYGMERLKDALLTTV-LNELDLT 401

Query: 227 GNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           GNP+G++G+  L   +   +  + RL +S    +  G+  + + ++  S L+ L L+ N 
Sbjct: 402 GNPLGNQGIDYLGQYMSHADCNLVRLNISECRFQSPGSILLFQAVRKCSSLKHLILDKND 461

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +     + L   +    T  S+ +  N G   G  ++A+GL  ++ L+ L L  NS+ DE
Sbjct: 462 LKSRNSSYLTTGIYHGLTYLSM-IRCNLGDDEGI-SVAEGLSRSRQLKALILQYNSLSDE 519

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
             + L   L+     +  LD+ +N I+                            D G E
Sbjct: 520 AAKTLAEALAKPTVNIEHLDLSHNKIN----------------------------DAGGE 551

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA +L QN +++ ++L  NN+     S  A+ +K NS I  LDL+ N +  +  + + +
Sbjct: 552 LIAISLGQNSSLSKLNLKSNNLKETTGSLFAKSVKQNSQIQFLDLSKNSVPVNFIEDIEQ 611

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
            L+    +N ++    +I     E V   L   N
Sbjct: 612 QLQ----VNLIRAAKNKIPQYKTEVVQLKLEQEN 641


>gi|290974964|ref|XP_002670214.1| predicted protein [Naegleria gruberi]
 gi|284083770|gb|EFC37470.1| predicted protein [Naegleria gruberi]
          Length = 383

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 152/308 (49%), Gaps = 51/308 (16%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F  E++   S+D+S    GDEG  F++E     +    +    N I   G+K  + +  
Sbjct: 121 KFITEMKQLKSLDISENRIGDEGAKFISEM----KQLTSLDIGYNRIGVVGVKFINEMKH 176

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELL 270
               L +L++SGN IGDEGVK +          E  QL+S+D       D+GAK+I+E+ 
Sbjct: 177 ----LTSLDISGNGIGDEGVKSIS---------ELKQLTSLDFNNNRIGDKGAKSISEMK 223

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
                L +L +NNN I   G    A  + E   ++SL +  N  G  G    AK +   K
Sbjct: 224 H----LTLLSINNNHIGAEG----ARFISEMKQLKSLSIYNNQIGDEG----AKFINEMK 271

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L  L + GN IG EG+  +     S   +L  L+IG N I  +GA  ++E     K L+
Sbjct: 272 QLTSLDISGNEIGVEGVIPI-----SEMKQLTSLEIGGNQIGDEGAKLISE----MKQLI 322

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +N+Y N IG EGA+ I++     + + ++ +GGN I  +G   I+ + +    +TSLD+
Sbjct: 323 SLNIYNNQIGIEGAKFISEM----KQLKSLYIGGNQIGDEGVKFISEMKQ----LTSLDI 374

Query: 451 AYNPIGAD 458
            YN I  D
Sbjct: 375 GYNEIVKD 382



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 54/288 (18%)

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+ L+++ N I   G    A+ + E   + SL +  N  G +G     K +   K L  L
Sbjct: 129 LKSLDISENRIGDEG----AKFISEMKQLTSLDIGYNRIGVVGV----KFINEMKHLTSL 180

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            + GN IGDEG++++     S   +L  LD  NN I  KGA  ++E     K L  +++ 
Sbjct: 181 DISGNGIGDEGVKSI-----SELKQLTSLDFNNNRIGDKGAKSISE----MKHLTLLSIN 231

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG EGA  I++     + + ++ +  N I  +GA  I  + +    +TSLD++ N I
Sbjct: 232 NNHIGAEGARFISEM----KQLKSLSIYNNQIGDEGAKFINEMKQ----LTSLDISGNEI 283

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR------YNNTISI------ 503
           G +G   +SE+ +    + +L++G  QIG  GA+ +++M +      YNN I I      
Sbjct: 284 GVEGVIPISEMKQ----LTSLEIGGNQIGDEGAKLISEMKQLISLNIYNNQIGIEGAKFI 339

Query: 504 --------LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
                   L +  N + DEG K +++      + LTS+D+ +NEI  D
Sbjct: 340 SEMKQLKSLYIGGNQIGDEGVKFISEM-----KQLTSLDIGYNEIVKD 382



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 133/255 (52%), Gaps = 36/255 (14%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K L+ L +  N IGDEG + +     S   +L  LDIG N I   G     ++I   K L
Sbjct: 127 KQLKSLDISENRIGDEGAKFI-----SEMKQLTSLDIGYNRIGVVGV----KFINEMKHL 177

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             +++  N IGDEG + I++ LKQ   +T++D   N I  KGA +I+ +      +T L 
Sbjct: 178 TSLDISGNGIGDEGVKSISE-LKQ---LTSLDFNNNRIGDKGAKSISEM----KHLTLLS 229

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           +  N IGA+GA+ +SE+ +    + +L +   QIG  GA+F+ +M      ++ LD+  N
Sbjct: 230 INNNHIGAEGARFISEMKQ----LKSLSIYNNQIGDEGAKFINEM----KQLTSLDISGN 281

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
            +  EG   +++      + LTS+++  N+I D+GA  I++  +      + SLN+ NN 
Sbjct: 282 EIGVEGVIPISEM-----KQLTSLEIGGNQIGDEGAKLISEMKQ------LISLNIYNNQ 330

Query: 570 LTKFGQSALTDAKDL 584
           +   G   +++ K L
Sbjct: 331 IGIEGAKFISEMKQL 345



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 63/215 (29%)

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA----------------- 457
           + + ++D+  N I  +GA  I+ + +    +TSLD+ YN IG                  
Sbjct: 127 KQLKSLDISENRIGDEGAKFISEMKQ----LTSLDIGYNRIGVVGVKFINEMKHLTSLDI 182

Query: 458 -------DGAKALSEV-----LKFHGN---------------INTLKLGWCQIGASGAEF 490
                  +G K++SE+     L F+ N               +  L +    IGA GA F
Sbjct: 183 SGNGIGDEGVKSISELKQLTSLDFNNNRIGDKGAKSISEMKHLTLLSINNNHIGAEGARF 242

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           +++M +  +    L +  N + DEGAK + +      + LTS+D++ NEI  +G   I++
Sbjct: 243 ISEMKQLKS----LSIYNNQIGDEGAKFINEM-----KQLTSLDISGNEIGVEGVIPISE 293

Query: 551 ALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
             +      +TSL +  N +   G   +++ K L+
Sbjct: 294 MKQ------LTSLEIGGNQIGDEGAKLISEMKQLI 322


>gi|47212943|emb|CAF92620.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 403

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 157/327 (48%), Gaps = 38/327 (11%)

Query: 247 GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
           G++R+Q     L D  A A+++ LKNN  +  L+++ N I   G   LA+ L  +ST+  
Sbjct: 67  GMKRVQ----RLDDRDALAVSKCLKNNRRVTGLDVSYNNITDEGLRHLADLLRGDSTLNF 122

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L  N   A  A  LAK L+GN++L  L L GN IGD                      
Sbjct: 123 LDLRFNECQADSAAVLAKILQGNRTLFSLRLSGNKIGD---------------------- 160

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
                  +G   +A  ++   SL+ + L   D+G      +A  L+ NR++  +D   + 
Sbjct: 161 -------RGGTQLATMLQVNDSLMELELSACDLGIHSVMMLAHVLRSNRSLRCVDFSQSL 213

Query: 427 IHSKGASAIARV---LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           + S     +  V   L  NS +  L L    I   G + L+E L+ + ++  L L    +
Sbjct: 214 LISHQEEWLVHVSNMLVVNSTLLELRLGMAGITDTGVQRLAEGLQLNHSLRYLDLRCNSL 273

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
              G  ++A++LR N T+ ++DL  N ++DEGA  L+++  +    L ++ +  N IR +
Sbjct: 274 SCDGGFYLAEVLRRNPTLDVIDLSFNRIQDEGAVHLSRALSLPGCGLRALSVRSNSIRTE 333

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFL 570
           G  ++A+A+K N   ++T +N+  N+L
Sbjct: 334 GLLSLARAVKVN--ASLTDINIWGNYL 358



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 149/316 (47%), Gaps = 20/316 (6%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  + +D+S  N  DEGL  LA+ L  + T   +    N   A        +LQ N  L 
Sbjct: 90  RRVTGLDVSYNNITDEGLRHLADLLRGDSTLNFLDLRFNECQADSAAVLAKILQGNRTLF 149

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L LSGN IGD G   L  +L  N  +  L+LS+ DL       +A +L++N  LR ++ 
Sbjct: 150 SLRLSGNKIGDRGGTQLATMLQVNDSLMELELSACDLGIHSVMMLAHVLRSNRSLRCVDF 209

Query: 282 NNNMI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + +++          ++  L+ NST+  L L        G   LA+GL+ N SLR L L 
Sbjct: 210 SQSLLISHQEEWLVHVSNMLVVNSTLLELRLGMAGITDTGVQRLAEGLQLNHSLRYLDLR 269

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK--NCKSLLWINLYM 396
            NS+  +G   L   L  R   L V+D+  N I  +GA H++  +    C  L  +++  
Sbjct: 270 CNSLSCDGGFYLAEVL-RRNPTLDVIDLSFNRIQDEGAVHLSRALSLPGC-GLRALSVRS 327

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI------ARVLKDNSVITSLDL 450
           N I  EG   +A A+K N ++T I++ GN +    + A        R+L D + +T+ ++
Sbjct: 328 NSIRTEGLLSLARAVKVNASLTDINIWGNYLEEPVSQAFHQLISSQRLLPDRTDVTAYEV 387

Query: 451 AYNPIGADGAKALSEV 466
                  DG   L+EV
Sbjct: 388 -------DGRVFLAEV 396



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 152/349 (43%), Gaps = 60/349 (17%)

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L++N  +  L++S N I DEG++ L                            A+
Sbjct: 81  AVSKCLKNNRRVTGLDVSYNNITDEGLRHL----------------------------AD 112

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           LL+ +S L  L+L  N         LA+ L  N T+ SL L+GN  G  G   LA  L+ 
Sbjct: 113 LLRGDSTLNFLDLRFNECQADSAAVLAKILQGNRTLFSLRLSGNKIGDRGGTQLATMLQV 172

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKN 385
           N SL EL L    +G   +  L   L S +  L  +D   +   S   +   HV+  +  
Sbjct: 173 NDSLMELELSACDLGIHSVMMLAHVLRSNRS-LRCVDFSQSLLISHQEEWLVHVSNMLVV 231

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             +LL + L M  I D G +++A+ L+ N ++  +DL  N++   G   +A VL+ N  +
Sbjct: 232 NSTLLELRLGMAGITDTGVQRLAEGLQLNHSLRYLDLRCNSLSCDGGFYLAEVLRRNPTL 291

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
             +DL++N I  +GA  LS  L   G         C + A                  L 
Sbjct: 292 DVIDLSFNRIQDEGAVHLSRALSLPG---------CGLRA------------------LS 324

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           +R+N +R EG   LA++ K VN +LT I++  N + +  + A  Q + +
Sbjct: 325 VRSNSIRTEGLLSLARAVK-VNASLTDINIWGNYLEEPVSQAFHQLISS 372


>gi|330845713|ref|XP_003294718.1| hypothetical protein DICPUDRAFT_159756 [Dictyostelium purpureum]
 gi|325074771|gb|EGC28760.1| hypothetical protein DICPUDRAFT_159756 [Dictyostelium purpureum]
          Length = 920

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 199/433 (45%), Gaps = 10/433 (2%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           SK    EF +  +         +    E    +A  L  N T   +SF  + +  + I++
Sbjct: 465 SKNLFTEFFEASKYMQYFRFYQKWVSPENFNAIANCLRLNNTITHLSFRHSNLEDSSIES 524

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
               L  N  ++ ++  GN + D     L  +L++N  ++ + L   ++  EG  A+ + 
Sbjct: 525 VISALSDNTTIENIDFRGNKLADASAIKLAQVLLNNKSLKIIDLFYNNIGPEGGAALCKA 584

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGALGANALAKGLE 327
           LK N  L  L +  N I  S    L ++L +NS+++ +HL+   +  GA+   A+  G  
Sbjct: 585 LKTNKTLEKLYIRWNHISGSSAVCLGDSLSKNSSLKCIHLDRIDDQSGAVLFEAI--GNS 642

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
               L E++L   ++      AL   LS +   L  L+  NN         +A  ++   
Sbjct: 643 TTSVLSEINLSDCALKSGTASALGKTLSKKNSTLLDLNFKNNQF-GNCIVSIASALQINN 701

Query: 388 SLLWINLYMNDIGDE-GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           +L  +NL  N I D+ G  ++A+A   N +IT++ L  N + ++ A  IAR L +  V +
Sbjct: 702 TLTKLNLSDNRISDQFGGWELAEAFSHNSSITSLSLSTNQLGNRFAEGIARALTNGCVKS 761

Query: 447 S---LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           S   LD++ N I  +GA+ ++E L+ +  +  L L   ++       +A+ L+ N T+  
Sbjct: 762 SLKLLDISGNQIDYEGARYIAEALRDNKTLKLLNLNQNKLSPQFGTLIAESLKSNQTLIH 821

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           L+L   GL D+G+  +A   K     L  ++L  N+I D      A+AL +N  + V  L
Sbjct: 822 LELSYTGLGDKGSLPIANLLKNNGTHLVRLNLNENQITDPTGHVFAEALLSNSYIQVLDL 881

Query: 564 NLANNFLTKFGQS 576
           +  N F  +  +S
Sbjct: 882 SF-NQFSYRVKES 893



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 192/404 (47%), Gaps = 16/404 (3%)

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
           F    ++     A    L+ N  +  L+   + + D  ++ +   L DN  +E +     
Sbjct: 484 FYQKWVSPENFNAIANCLRLNNTITHLSFRHSNLEDSSIESVISALSDNTTIENIDFRGN 543

Query: 257 DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
            L D  A  +A++L NN  L++++L  N I   G  +L +AL  N T+  L++  N+   
Sbjct: 544 KLADASAIKLAQVLLNNKSLKIIDLFYNNIGPEGGAALCKALKTNKTLEKLYIRWNHISG 603

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL-SSRKGKLAVLDIGNNSISAKG 375
             A  L   L  N SL+ +HL  + I D+    L   + +S    L+ +++ + ++ +  
Sbjct: 604 SSAVCLGDSLSKNSSLKCIHL--DRIDDQSGAVLFEAIGNSTTSVLSEINLSDCALKSGT 661

Query: 376 AFHVAEYI-KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK-GAS 433
           A  + + + K   +LL +N   N  G+     IA AL+ N T+T ++L  N I  + G  
Sbjct: 662 ASALGKTLSKKNSTLLDLNFKNNQFGN-CIVSIASALQINNTLTKLNLSDNRISDQFGGW 720

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK---FHGNINTLKLGWCQIGASGAEF 490
            +A     NS ITSL L+ N +G   A+ ++  L       ++  L +   QI   GA +
Sbjct: 721 ELAEAFSHNSSITSLSLSTNQLGNRFAEGIARALTNGCVKSSLKLLDISGNQIDYEGARY 780

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           +A+ LR N T+ +L+L  N L  +    +A+S K  N+ L  ++L++  + D G+  IA 
Sbjct: 781 IAEALRDNKTLKLLNLNQNKLSPQFGTLIAESLK-SNQTLIHLELSYTGLGDKGSLPIAN 839

Query: 551 ALKANEDVAVTSLNLANNFLTK-----FGQSALTDAKDLVYEMS 589
            LK N    +  LNL  N +T      F ++ L+++   V ++S
Sbjct: 840 LLK-NNGTHLVRLNLNENQITDPTGHVFAEALLSNSYIQVLDLS 882



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 121/272 (44%), Gaps = 35/272 (12%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE-GVKCLCDILVDNAG 247
           N T  +++F  N      I +    LQ N  L  LNLS N I D+ G   L +    N+ 
Sbjct: 673 NSTLLDLNFKNNQF-GNCIVSIASALQINNTLTKLNLSDNRISDQFGGWELAEAFSHNSS 731

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSI---LRVLELNNNMIDYSGFTSLAEALLENSTI 304
           +  L LS+  L +  A+ IA  L N  +   L++L+++ N IDY G   +AEAL +N T+
Sbjct: 732 ITSLSLSTNQLGNRFAEGIARALTNGCVKSSLKLLDISGNQIDYEGARYIAEALRDNKTL 791

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           + L+LN N         +A+ L+ N++L  L L    +GD                    
Sbjct: 792 KLLNLNQNKLSPQFGTLIAESLKSNQTLIHLELSYTGLGD-------------------- 831

Query: 365 DIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
                    KG+  +A  +KN  + L+ +NL  N I D      A+AL  N  I  +DL 
Sbjct: 832 ---------KGSLPIANLLKNNGTHLVRLNLNENQITDPTGHVFAEALLSNSYIQVLDLS 882

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N    +   +  R +K N  IT+L  +  P+
Sbjct: 883 FNQFSYRVKESFERSMKSNLSITNLSFSSVPL 914



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 3/199 (1%)

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E+ +  K + +   Y   +  E    IA+ L+ N TIT +    +N+      ++   L
Sbjct: 470 TEFFEASKYMQYFRFYQKWVSPENFNAIANCLRLNNTITHLSFRHSNLEDSSIESVISAL 529

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
            DN+ I ++D   N +    A  L++VL  + ++  + L +  IG  G   +   L+ N 
Sbjct: 530 SDNTTIENIDFRGNKLADASAIKLAQVLLNNKSLKIIDLFYNNIGPEGGAALCKALKTNK 589

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
           T+  L +R N +    A CL  S    N +L  I L  + I D     + +A+  +    
Sbjct: 590 TLEKLYIRWNHISGSSAVCLGDSLS-KNSSLKCIHL--DRIDDQSGAVLFEAIGNSTTSV 646

Query: 560 VTSLNLANNFLTKFGQSAL 578
           ++ +NL++  L     SAL
Sbjct: 647 LSEINLSDCALKSGTASAL 665


>gi|449273366|gb|EMC82861.1| Nucleotide-binding oligomerization domain-containing protein 1
           [Columba livia]
          Length = 951

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 133/251 (52%), Gaps = 7/251 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N+I D G++ L+   S    KLAV+ +  N ++  G   + E +   +++ ++ L
Sbjct: 706 LDLDNNNINDYGVKELLPCFS----KLAVIRLSVNQVTDHGVRILYEELSKYQTVTYLGL 761

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           Y N I D GA+ +A  +++  ++  + +G N I S+G   +A+ ++ +  +  + +  N 
Sbjct: 762 YNNQITDVGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNH 821

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G +GAKA ++ L+ H  +  + L +  I   G + +A+ +++NN++ I  L  N L DE
Sbjct: 822 VGDEGAKAFAQALRNHPTLTNVSLAFNGITTEGGKSIAEAMQHNNSVRIFWLTKNELDDE 881

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            A   A+  K VN+ L  + L  N I  +G   +++ALK  E+ A+  + L  N +++  
Sbjct: 882 AAMSFAEMLK-VNKKLVHLWLIQNRITAEGVKYLSEALK--ENTAIKEVCLNGNLISQEE 938

Query: 575 QSALTDAKDLV 585
             A  + K +V
Sbjct: 939 AKAFENDKRIV 949



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 115/236 (48%), Gaps = 4/236 (1%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N I   G+K    +L     L  + LS N + D GV+ L + L     V  L L +  + 
Sbjct: 711 NNINDYGVKE---LLPCFSKLAVIRLSVNQVTDHGVRILYEELSKYQTVTYLGLYNNQIT 767

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GAK +A+L++  S L  +++  N I   G   LA+A+ ++ T+  + + GN+ G  GA
Sbjct: 768 DVGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNHVGDEGA 827

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A A+ L  + +L  + L  N I  EG +++   +      + +  +  N +  + A   
Sbjct: 828 KAFAQALRNHPTLTNVSLAFNGITTEGGKSIAEAM-QHNNSVRIFWLTKNELDDEAAMSF 886

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           AE +K  K L+ + L  N I  EG + +++ALK+N  I  + L GN I  + A A 
Sbjct: 887 AEMLKVNKKLVHLWLIQNRITAEGVKYLSEALKENTAIKEVCLNGNLISQEEAKAF 942



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 3/195 (1%)

Query: 159 KELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +EL  + +V   G       D G  ++A+ +    + E V   AN IT+ G K     +Q
Sbjct: 748 EELSKYQTVTYLGLYNNQITDVGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQ 807

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            +  +  + + GN +GDEG K     L ++  +  + L+   +  EG K+IAE +++N+ 
Sbjct: 808 KSKTMFEIGMWGNHVGDEGAKAFAQALRNHPTLTNVSLAFNGITTEGGKSIAEAMQHNNS 867

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           +R+  L  N +D     S AE L  N  +  L L  N   A G   L++ L+ N +++E+
Sbjct: 868 VRIFWLTKNELDDEAAMSFAEMLKVNKKLVHLWLIQNRITAEGVKYLSEALKENTAIKEV 927

Query: 336 HLHGNSIGDEGIRAL 350
            L+GN I  E  +A 
Sbjct: 928 CLNGNLISQEEAKAF 942



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 4/204 (1%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           K+ L  F+K     + + +S     D G+  L E L   QT   +    N IT  G K  
Sbjct: 719 KELLPCFSK----LAVIRLSVNQVTDHGVRILYEELSKYQTVTYLGLYNNQITDVGAKYV 774

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             +++   +L+ + +  N I  EG KCL   +  +  +  + +    + DEGAKA A+ L
Sbjct: 775 AKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNHVGDEGAKAFAQAL 834

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +N+  L  + L  N I   G  S+AEA+  N+++R   L  N      A + A+ L+ NK
Sbjct: 835 RNHPTLTNVSLAFNGITTEGGKSIAEAMQHNNSVRIFWLTKNELDDEAAMSFAEMLKVNK 894

Query: 331 SLRELHLHGNSIGDEGIRALMSGL 354
            L  L L  N I  EG++ L   L
Sbjct: 895 KLVHLWLIQNRITAEGVKYLSEAL 918



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 83/188 (44%), Gaps = 32/188 (17%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L +  ++ +    + M G + GDEG    A++L  + T   VS A NGIT 
Sbjct: 793 KITSEGGKCLAQAIQKSKTMFEIGMWGNHVGDEGAKAFAQALRNHPTLTNVSLAFNGITT 852

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    +Q N +++   L+ N                            +L DE A 
Sbjct: 853 EGGKSIAEAMQHNNSVRIFWLTKN----------------------------ELDDEAAM 884

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           + AE+LK N  L  L L  N I   G   L+EAL EN+ I+ + LNGN    L +   AK
Sbjct: 885 SFAEMLKVNKKLVHLWLIQNRITAEGVKYLSEALKENTAIKEVCLNGN----LISQEEAK 940

Query: 325 GLEGNKSL 332
             E +K +
Sbjct: 941 AFENDKRI 948



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 28/202 (13%)

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK----------DN------------ 442
           EK+     +      + L   N  S   SAI+ V+           DN            
Sbjct: 663 EKVGKLAAKRMHANYVKLTYCNASSADCSAISFVMHHFQKRLALDLDNNNINDYGVKELL 722

Query: 443 ---SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
              S +  + L+ N +   G + L E L  +  +  L L   QI   GA++VA ++   +
Sbjct: 723 PCFSKLAVIRLSVNQVTDHGVRILYEELSKYQTVTYLGLYNNQITDVGAKYVAKLIEECS 782

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
           ++  + + AN +  EG KCLAQ+ +  ++ +  I +  N + D+GA A AQAL+ +    
Sbjct: 783 SLEYVKIGANKITSEGGKCLAQAIQ-KSKTMFEIGMWGNHVGDEGAKAFAQALRNHP--T 839

Query: 560 VTSLNLANNFLTKFGQSALTDA 581
           +T+++LA N +T  G  ++ +A
Sbjct: 840 LTNVSLAFNGITTEGGKSIAEA 861


>gi|291239438|ref|XP_002739630.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 1748

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 185/414 (44%), Gaps = 28/414 (6%)

Query: 171  GRNFGDEGLFFLAESLGYNQTAEEVSFAANG-ITAAGIKA-FDGVLQSNIALKTLNLSGN 228
            G  F    +  ++E L +N     +S   +     +GI + +   L+ N  L++LNLS  
Sbjct: 1306 GSKFSPTHMAVISEVLKHNTRLLSLSIGGHDYFCDSGIPSLYQNGLKFNSTLQSLNLSFC 1365

Query: 229  PIGDE--------------------GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
             +G++                    G   +  I+     + ++ +S   L  +GA+ +A 
Sbjct: 1366 NLGEDESSWMSVCGSSLEPMFYDFTGAAVIAHIIRHCFSLTQVNVSQCKLTPQGAQHLAN 1425

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
             +K N  +  L+L+ N I   G   +   L  N+T+  L LN            +  L  
Sbjct: 1426 AMKQNQTVTSLDLSYNSIGEVGIAEVGNVLRINTTLNELQLNRIGFDEHSIMVFSDALGR 1485

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N+ LR+L+L    +    +   +      K  L +LD+  N+I+  G   + + +++   
Sbjct: 1486 NRGLRKLYLKECGVWGRALIVPLVNALCHKTDLELLDLSLNAIADDGIVILMDVLQHSNQ 1545

Query: 389  LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            +  ++L +N I D   + +A  L     +  + L  N+I S+GA  IA +L   + +  L
Sbjct: 1546 MKHLDLSVNKISDISIQSLAQGLLAMPQLQALLLQLNDITSRGARVIASLLPRLTQLKRL 1605

Query: 449  DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL-- 506
            DL  N IG  G   +++ LK H N+  + L    IG SGA+ +A++L  N TI+ L L  
Sbjct: 1606 DLEKNKIGDKGVTWVAKSLKNHPNLRVVNLCDNDIGNSGAKSMAEVLHINPTITHLKLCG 1665

Query: 507  ---RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
               + N + +EG   ++++    N  L  +D     I ++GA A+A AL+ N D
Sbjct: 1666 DVRQTNYIDNEGVWNISRAL-ATNRTLLYLDFTRQHIGNEGAMALANALEGNPD 1718



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 159/349 (45%), Gaps = 14/349 (4%)

Query: 205  AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
             G      +++   +L  +N+S   +  +G + L + +  N  V  L LS   + + G  
Sbjct: 1390 TGAAVIAHIIRHCFSLTQVNVSQCKLTPQGAQHLANAMKQNQTVTSLDLSYNSIGEVGIA 1449

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGALGANAL 322
             +  +L+ N+ L  L+LN    D       ++AL  N  +R L+L   G +G AL    L
Sbjct: 1450 EVGNVLRINTTLNELQLNRIGFDEHSIMVFSDALGRNRGLRKLYLKECGVWGRALIV-PL 1508

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
               L     L  L L  N+I D+GI  LM  L     ++  LD+  N IS      +A+ 
Sbjct: 1509 VNALCHKTDLELLDLSLNAIADDGIVILMDVLQ-HSNQMKHLDLSVNKISDISIQSLAQG 1567

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
            +     L  + L +NDI   GA  IA  L +   +  +DL  N I  KG + +A+ LK++
Sbjct: 1568 LLAMPQLQALLLQLNDITSRGARVIASLLPRLTQLKRLDLEKNKIGDKGVTWVAKSLKNH 1627

Query: 443  SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC-------QIGASGAEFVADML 495
              +  ++L  N IG  GAK+++EVL  +  I  LKL  C        I   G   ++  L
Sbjct: 1628 PNLRVVNLCDNDIGNSGAKSMAEVLHINPTITHLKL--CGDVRQTNYIDNEGVWNISRAL 1685

Query: 496  RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE-IRDD 543
              N T+  LD     + +EGA  LA + +   +    I+L FNE I DD
Sbjct: 1686 ATNRTLLYLDFTRQHIGNEGAMALANALEGNPDNDIIINLNFNERITDD 1734



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 164/383 (42%), Gaps = 75/383 (19%)

Query: 261  EGAKAIAELLKNNSI--LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG-NYGGAL 317
            E  +AI + ++ +SI  L V     +    +    ++E L  N+ + SL + G +Y    
Sbjct: 1282 ENLQAIVDSIRCSSIEHLYVFPCFGSKFSPTHMAVISEVLKHNTRLLSLSIGGHDYFCDS 1341

Query: 318  GANALAK-GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            G  +L + GL+ N +L+ L+L   ++G++   + MS   S    +             GA
Sbjct: 1342 GIPSLYQNGLKFNSTLQSLNLSFCNLGEDE-SSWMSVCGSSLEPMFY--------DFTGA 1392

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
              +A  I++C SL  +N+    +  +GA+ +A+A+KQN+T+T++DL  N+I   G + + 
Sbjct: 1393 AVIAHIIRHCFSLTQVNVSQCKLTPQGAQHLANAMKQNQTVTSLDLSYNSIGEVGIAEVG 1452

Query: 437  RVLKDNSVITSLDLAYNPIGAD--GAKALSEVLKFHGNINTLKLGWC------------- 481
             VL+ N+ +  L L  N IG D       S+ L  +  +  L L  C             
Sbjct: 1453 NVLRINTTLNELQL--NRIGFDEHSIMVFSDALGRNRGLRKLYLKECGVWGRALIVPLVN 1510

Query: 482  ----------------QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF-- 523
                             I   G   + D+L+++N +  LDL  N + D   + LAQ    
Sbjct: 1511 ALCHKTDLELLDLSLNAIADDGIVILMDVLQHSNQMKHLDLSVNKISDISIQSLAQGLLA 1570

Query: 524  -------------------KVVNE------ALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
                               +V+         L  +DL  N+I D G   +A++LK + ++
Sbjct: 1571 MPQLQALLLQLNDITSRGARVIASLLPRLTQLKRLDLEKNKIGDKGVTWVAKSLKNHPNL 1630

Query: 559  AVTSLNLANNFLTKFGQSALTDA 581
             V  +NL +N +   G  ++ + 
Sbjct: 1631 RV--VNLCDNDIGNSGAKSMAEV 1651



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 93/193 (48%), Gaps = 5/193 (2%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+S     D+G+  L + L ++   + +  + N I+   I++    L +   L+ L L 
Sbjct: 1521 LDLSLNAIADDGIVILMDVLQHSNQMKHLDLSVNKISDISIQSLAQGLLAMPQLQALLLQ 1580

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N I   G + +  +L     ++RL L    + D+G   +A+ LKN+  LRV+ L +N I
Sbjct: 1581 LNDITSRGARVIASLLPRLTQLKRLDLEKNKIGDKGVTWVAKSLKNHPNLRVVNLCDNDI 1640

Query: 287  DYSGFTSLAEALLENSTIRSLHLNG-----NYGGALGANALAKGLEGNKSLRELHLHGNS 341
              SG  S+AE L  N TI  L L G     NY    G   +++ L  N++L  L      
Sbjct: 1641 GNSGAKSMAEVLHINPTITHLKLCGDVRQTNYIDNEGVWNISRALATNRTLLYLDFTRQH 1700

Query: 342  IGDEGIRALMSGL 354
            IG+EG  AL + L
Sbjct: 1701 IGNEGAMALANAL 1713


>gi|348573181|ref|XP_003472370.1| PREDICTED: uncharacterized protein C14orf166B homolog [Cavia
           porcellus]
          Length = 556

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 125/232 (53%), Gaps = 3/232 (1%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++L+ + +G  G +A+   L S    +  L++ +N I  +G   + E +     L  +N+
Sbjct: 134 MNLNHHGLGPLGTKAIAVALVSNTAIIG-LELEDNRIMKEGVLSLVEMLHENYYLQELNI 192

Query: 395 YMNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             ND+G EGA+ I+D L++N  ++  + L GNN   + A+ + + L  N  I  LDL++N
Sbjct: 193 STNDLGLEGAKIISDFLQKNISSLWKLKLSGNNFKEESAALLCQALSSNYRIKKLDLSHN 252

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
                G + L ++L  +  + +L L W      GA  +   LR N T+  L+L  NG  +
Sbjct: 253 EFSDKGGELLGQMLGINVGLESLDLSWNHFHIQGAVALCSGLRSNVTLKKLNLSMNGFGN 312

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           EGA+ L + F+ +N  LT +D++ N I +DGA  +++ L++NE + V  L L
Sbjct: 313 EGAQALGEVFR-LNSCLTHVDVSSNNISNDGASKLSRGLESNETLQVLKLFL 363



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 135/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G LG  A+A  L  N ++  L L  N I  EG+ +L+  L      L  L+I
Sbjct: 134 MNLNHHGLGPLGTKAIAVALVSNTAIIGLELEDNRIMKEGVLSLVEMLHENY-YLQELNI 192

Query: 367 GNNSISAKGAFHVAEYI-KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
             N +  +GA  +++++ KN  SL  + L  N+  +E A  +  AL  N  I  +DL  N
Sbjct: 193 STNDLGLEGAKIISDFLQKNISSLWKLKLSGNNFKEESAALLCQALSSNYRIKKLDLSHN 252

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               KG   + ++L  N  + SLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 253 EFSDKGGELLGQMLGINVGLESLDLSWNHFHIQGAVALCSGLRSNVTLKKLNLSMNGFGN 312

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA+ + ++ R N+ ++ +D+ +N + ++GA  L++  +  NE L  + L  N I  DGA
Sbjct: 313 EGAQALGEVFRLNSCLTHVDVSSNNISNDGASKLSRGLES-NETLQVLKLFLNPISMDGA 371

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  A+K N    +  L+++N  +T+
Sbjct: 372 VLLILAIKRNPKSVMEELDISNVLVTE 398



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 28/261 (10%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           +G+   G KA    L SN A+  L L  N I  EGV  L ++L +N  ++ L +S+ DL 
Sbjct: 139 HGLGPLGTKAIAVALVSNTAIIGLELEDNRIMKEGVLSLVEMLHENYYLQELNISTNDLG 198

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
            EGAK I++ L+ N                            S++  L L+GN      A
Sbjct: 199 LEGAKIISDFLQKNI---------------------------SSLWKLKLSGNNFKEESA 231

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             L + L  N  +++L L  N   D+G   L   L    G L  LD+  N    +GA  +
Sbjct: 232 ALLCQALSSNYRIKKLDLSHNEFSDKGGELLGQMLGINVG-LESLDLSWNHFHIQGAVAL 290

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
              +++  +L  +NL MN  G+EGA+ + +  + N  +T +D+  NNI + GAS ++R L
Sbjct: 291 CSGLRSNVTLKKLNLSMNGFGNEGAQALGEVFRLNSCLTHVDVSSNNISNDGASKLSRGL 350

Query: 440 KDNSVITSLDLAYNPIGADGA 460
           + N  +  L L  NPI  DGA
Sbjct: 351 ESNETLQVLKLFLNPISMDGA 371



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 2/262 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++++    G  G   +A +L  N     +    N I   G+ +   +L  N  L+ LN+S
Sbjct: 134 MNLNHHGLGPLGTKAIAVALVSNTAIIGLELEDNRIMKEGVLSLVEMLHENYYLQELNIS 193

Query: 227 GNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N +G EG K + D L  N + + +L+LS  + ++E A  + + L +N  ++ L+L++N 
Sbjct: 194 TNDLGLEGAKIISDFLQKNISSLWKLKLSGNNFKEESAALLCQALSSNYRIKKLDLSHNE 253

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G   L + L  N  + SL L+ N+    GA AL  GL  N +L++L+L  N  G+E
Sbjct: 254 FSDKGGELLGQMLGINVGLESLDLSWNHFHIQGAVALCSGLRSNVTLKKLNLSMNGFGNE 313

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G +AL   +      L  +D+ +N+IS  GA  ++  +++ ++L  + L++N I  +GA 
Sbjct: 314 GAQAL-GEVFRLNSCLTHVDVSSNNISNDGASKLSRGLESNETLQVLKLFLNPISMDGAV 372

Query: 406 KIADALKQNRTITTIDLGGNNI 427
            +  A+K+N      +L  +N+
Sbjct: 373 LLILAIKRNPKSVMEELDISNV 394



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 110/230 (47%), Gaps = 3/230 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI-ALK 221
           A   +++       EG+  L E L  N   +E++ + N +   G K     LQ NI +L 
Sbjct: 158 AIIGLELEDNRIMKEGVLSLVEMLHENYYLQELNISTNDLGLEGAKIISDFLQKNISSLW 217

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L LSGN   +E    LC  L  N  +++L LS  +  D+G + + ++L  N  L  L+L
Sbjct: 218 KLKLSGNNFKEESAALLCQALSSNYRIKKLDLSHNEFSDKGGELLGQMLGINVGLESLDL 277

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + N     G  +L   L  N T++ L+L+ N  G  GA AL +    N  L  + +  N+
Sbjct: 278 SWNHFHIQGAVALCSGLRSNVTLKKLNLSMNGFGNEGAQALGEVFRLNSCLTHVDVSSNN 337

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLL 390
           I ++G   L  GL S +  L VL +  N IS  GA  +   IK N KS++
Sbjct: 338 ISNDGASKLSRGLESNE-TLQVLKLFLNPISMDGAVLLILAIKRNPKSVM 386



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 2/234 (0%)

Query: 143 TGKLFRESKQTLNEF-AKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           T  L  E  + +++F  K + +   + +SG NF +E    L ++L  N   +++  + N 
Sbjct: 194 TNDLGLEGAKIISDFLQKNISSLWKLKLSGNNFKEESAALLCQALSSNYRIKKLDLSHNE 253

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
            +  G +    +L  N+ L++L+LS N    +G   LC  L  N  +++L LS     +E
Sbjct: 254 FSDKGGELLGQMLGINVGLESLDLSWNHFHIQGAVALCSGLRSNVTLKKLNLSMNGFGNE 313

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA+A+ E+ + NS L  +++++N I   G + L+  L  N T++ L L  N     GA  
Sbjct: 314 GAQALGEVFRLNSCLTHVDVSSNNISNDGASKLSRGLESNETLQVLKLFLNPISMDGAVL 373

Query: 322 LAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           L   ++ N KS+ E     N +  E    ++ G+ +   +L VL     S+S K
Sbjct: 374 LILAIKRNPKSVMEELDISNVLVTEQFTKILDGVYAAHPQLEVLYDTVKSLSGK 427


>gi|326678406|ref|XP_683789.5| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Danio
            rerio]
          Length = 1291

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 201/428 (46%), Gaps = 16/428 (3%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + SS D S  ++    L F+   L  ++  EE++     +T     A   VL+S+ +LK 
Sbjct: 770  SLSSADFSSAHWS--ALAFVL--LTSDEEMEELNDC--NLTDRSCSALATVLESDTSLKE 823

Query: 223  LNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLE 280
            LN+S N + D GVK LC  L D    +E L+LS  ++ +EG KA+A  L++N S L  L+
Sbjct: 824  LNMSNNNLQDSGVKLLCTGLKDMKCELEILRLSDCNITEEGYKALASALRSNPSHLLELD 883

Query: 281  LNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLH 338
            L  N    SG   L + L + N T+++L L G         +L   L+ N S LREL L 
Sbjct: 884  LRGNDPGESGVKELDDLLQDPNCTLKTLSLGGCSFTDDQWESLTSALKLNPSHLRELILM 943

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMN 397
             N  G+ G++ L   L   + KL  L +   SI+ +    +   +K N   L  +NL  N
Sbjct: 944  WNGPGESGVKILSDFLIEPQLKLEKLCLCYCSITEERCEILTSALKSNPSHLRELNLSQN 1003

Query: 398  DIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYNPI 455
              GD G + ++D L   ++ +  + L   +I  +    +   LK N S +  L+L+ N +
Sbjct: 1004 IPGDSGMKNLSDLLMNPQSKLEKLQLCKCSITEEQCVILTSALKSNPSHLRDLNLSLNNL 1063

Query: 456  GADGAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRD 513
            G  G K LS++L K H  +  L L  C I       +A  L+ N + +  L L  N L D
Sbjct: 1064 GDSGVKTLSDLLMKPHLKMEKLWLCKCSITEEQCVILASALKSNPSHLRELSLSENNLGD 1123

Query: 514  EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
             G K L+         L  + L+   I ++    +  ALK+N    +  L+++ N +   
Sbjct: 1124 SGVKNLSDLLMKPQFKLEKLHLSHCSITEEQCEILTSALKSNPS-HLRELDISKNQIRNT 1182

Query: 574  GQSALTDA 581
            G + L D 
Sbjct: 1183 GVNLLCDV 1190



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 117/278 (42%), Gaps = 36/278 (12%)

Query: 175  GDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGD 232
            G+ G+  L++ L   Q   E++      IT    +     L+SN + L+ LNLS N  GD
Sbjct: 948  GESGVKILSDFLIEPQLKLEKLCLCYCSITEERCEILTSALKSNPSHLRELNLSQNIPGD 1007

Query: 233  EGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSG 290
             G+K L D+L++  + +E+LQL    + +E    +   LK+N S LR L L+ N +  SG
Sbjct: 1008 SGMKNLSDLLMNPQSKLEKLQLCKCSITEEQCVILTSALKSNPSHLRDLNLSLNNLGDSG 1067

Query: 291  FTSLAEALLEN------------------------------STIRSLHLNGNYGGALGAN 320
              +L++ L++                               S +R L L+ N  G  G  
Sbjct: 1068 VKTLSDLLMKPHLKMEKLWLCKCSITEEQCVILASALKSNPSHLRELSLSENNLGDSGVK 1127

Query: 321  ALAKGLEGNK-SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             L+  L   +  L +LHL   SI +E    L S L S    L  LDI  N I   G   +
Sbjct: 1128 NLSDLLMKPQFKLEKLHLSHCSITEEQCEILTSALKSNPSHLRELDISKNQIRNTGVNLL 1187

Query: 380  AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
             + + N    L   L +ND G      +   L   + +
Sbjct: 1188 CDVLNNSDCKLE-TLRLNDCGITDVSSLTQCLTNTKAL 1224


>gi|340054486|emb|CCC48783.1| putative leucine-rich repeat protein (LRRP) [Trypanosoma vivax
           Y486]
          Length = 460

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 181/366 (49%), Gaps = 7/366 (1%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           + + +  ++LS N IG E  + L   L + + V    L   D+  +G  A+A ++  +  
Sbjct: 65  TEVPVTVVHLSDNQIGPEQAQKLAAAL-EASTVREALLCFNDIGKDGCDALANVVNVSVK 123

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L++L++  N +       L +++  ++++  L L  N  G  GA  L + LE N  L  L
Sbjct: 124 LQLLDIRGNNLTPKCVRKLLKSISMSTSLTRLGLGSNKLGEEGAALLLRALEKNTHLTSL 183

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            +  N IG  G +++   L +    L  L +  N +   G  H+   ++  +SL  + L 
Sbjct: 184 DISLNEIGPNGAKSIAQLLETPSSPLEKLQLYGNYLGCDGVVHITSALRRNRSLKELTLG 243

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNP 454
            N+  D    K+A+ L+ N T++ +DL  N I + GA  +AR  L +N  + SL L+ NP
Sbjct: 244 NNNATDAAMSKVAEMLRDNITLSYLDLRLNTITASGARTLARDGLANNCFLQSLSLSGNP 303

Query: 455 IGADGAKALSEVLK-FHGNINT-LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           IG+ GA+ +   L    G + T L L  C++G+ G   +AD++  + TI  +DL  N L 
Sbjct: 304 IGSVGAEQIFRALTGSQGPVLTRLDLSSCELGSVGGTRIADLITSSTTIEDVDLSDNQLD 363

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           D+ A  L++S      ++++++L+ N+I +  A  +  A + N    V SL L  N + +
Sbjct: 364 DDSAVALSRSL-ANGLSISALNLSSNKIGEWSASNLIDATQLNP--RVMSLILHGNKINR 420

Query: 573 FGQSAL 578
             Q  +
Sbjct: 421 VVQKKI 426



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 146/275 (53%), Gaps = 3/275 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           +HL+ N  G   A  LA  LE + ++RE  L  N IG +G  AL + + +   KL +LDI
Sbjct: 72  VHLSDNQIGPEQAQKLAAALEAS-TVREALLCFNDIGKDGCDAL-ANVVNVSVKLQLLDI 129

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
             N+++ K    + + I    SL  + L  N +G+EGA  +  AL++N  +T++D+  N 
Sbjct: 130 RGNNLTPKCVRKLLKSISMSTSLTRLGLGSNKLGEEGAALLLRALEKNTHLTSLDISLNE 189

Query: 427 IHSKGASAIARVLKD-NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           I   GA +IA++L+  +S +  L L  N +G DG   ++  L+ + ++  L LG      
Sbjct: 190 IGPNGAKSIAQLLETPSSPLEKLQLYGNYLGCDGVVHITSALRRNRSLKELTLGNNNATD 249

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
           +    VA+MLR N T+S LDLR N +   GA+ LA+     N  L S+ L+ N I   GA
Sbjct: 250 AAMSKVAEMLRDNITLSYLDLRLNTITASGARTLARDGLANNCFLQSLSLSGNPIGSVGA 309

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
             I +AL  ++   +T L+L++  L   G + + D
Sbjct: 310 EQIFRALTGSQGPVLTRLDLSSCELGSVGGTRIAD 344



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 167/349 (47%), Gaps = 10/349 (2%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           V +S    G E    LA +L  + T  E     N I   G  A   V+  ++ L+ L++ 
Sbjct: 72  VHLSDNQIGPEQAQKLAAALEAS-TVREALLCFNDIGKDGCDALANVVNVSVKLQLLDIR 130

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +  + V+ L   +  +  + RL L S  L +EGA  +   L+ N+ L  L+++ N I
Sbjct: 131 GNNLTPKCVRKLLKSISMSTSLTRLGLGSNKLGEEGAALLLRALEKNTHLTSLDISLNEI 190

Query: 287 DYSGFTSLAEALLE--NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
             +G  S+A+ LLE  +S +  L L GNY G  G   +   L  N+SL+EL L  N+  D
Sbjct: 191 GPNGAKSIAQ-LLETPSSPLEKLQLYGNYLGCDGVVHITSALRRNRSLKELTLGNNNATD 249

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMNDIGDE 402
             +  +   L      L+ LD+  N+I+A GA  +A      NC  L  ++L  N IG  
Sbjct: 250 AAMSKVAEMLRDNI-TLSYLDLRLNTITASGARTLARDGLANNC-FLQSLSLSGNPIGSV 307

Query: 403 GAEKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           GAE+I  AL   Q   +T +DL    + S G + IA ++  ++ I  +DL+ N +  D A
Sbjct: 308 GAEQIFRALTGSQGPVLTRLDLSSCELGSVGGTRIADLITSSTTIEDVDLSDNQLDDDSA 367

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            ALS  L    +I+ L L   +IG   A  + D  + N  +  L L  N
Sbjct: 368 VALSRSLANGLSISALNLSSNKIGEWSASNLIDATQLNPRVMSLILHGN 416


>gi|410226008|gb|JAA10223.1| NLR family, CARD domain containing 5 [Pan troglodytes]
 gi|410304708|gb|JAA30954.1| NLR family, CARD domain containing 5 [Pan troglodytes]
 gi|410349473|gb|JAA41340.1| NLR family, CARD domain containing 5 [Pan troglodytes]
          Length = 1866

 Score =  108 bits (271), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 163/346 (47%), Gaps = 14/346 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1497 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1556

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L   + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1557 LSHLLLNSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1617 QIGDAGVQHLATILPGLP-ELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1675

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1676 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 1731

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE A 
Sbjct: 1732 -----VLRFCKELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAA 1786

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
             LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1787 ELAQVLPQMGR-LKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRL 1831



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 94/341 (27%), Positives = 138/341 (40%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
            EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 1509 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 1568

Query: 228  -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                               N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1569 LLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL---------------LENST---------- 303
            +L     LR ++L+ N I  +G   LAE+L               L + T          
Sbjct: 1629 ILPGLPELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 1688

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    +R            L 
Sbjct: 1689 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLR-----FCKELPLLR 1743

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             +D+ +  I  + A  +     +C +L  I L  N +GDE A ++A  L Q   +  +DL
Sbjct: 1744 QIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDL 1803

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D  + L
Sbjct: 1804 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMVQHL 1844



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 87/348 (25%), Positives = 142/348 (40%), Gaps = 38/348 (10%)

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI---DYSGFTSLAEALLE 300
            +N     L+L+  DL    +  + +L++  + L+ L L+   +   D +    L   LL 
Sbjct: 1433 ENPEAVALRLAHCDLGAHHSLLVGQLMETCARLQQLSLSQVNLCEDDDASSLLLQSLLLS 1492

Query: 301  NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
             S +++  L  +     G   LA GL     L EL L  N   +EG +ALM  L   K  
Sbjct: 1493 LSELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEG-KWM 1551

Query: 361  LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
            L  LD+ +  +++     +   + +   L  + L  N IGD G   +++AL+   ++  +
Sbjct: 1552 LKRLDLSHLLLNSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEEL 1611

Query: 421  DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            DL  N I   G   +A +L     +  +DL+ N I + G   L+E L     +  L LG 
Sbjct: 1612 DLSHNQIGDAGVQHLATILPGLPELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLG- 1670

Query: 481  CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
                                        N L D  A  LAQ      + L  + L F+ +
Sbjct: 1671 ---------------------------CNALGDPTALGLAQELP---QHLRVLHLPFSHL 1700

Query: 541  RDDGAFAIAQALKAN---EDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
               GA ++AQAL  +   E++++   NLA   L    +  L    DLV
Sbjct: 1701 GPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCKELPLLRQIDLV 1748



 Score = 52.0 bits (123), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 28/252 (11%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L G   +  L       GD    AL   L +  G+L +L +  + I+A+G  H+ + +
Sbjct: 680 EALVGCGQIENLSFRSRKCGDTFAEALSRSLPTM-GRLQMLGLAGSKITARGISHLVKAL 738

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV----- 438
             C  L  ++   N + D+    I + L     +  +DL  N+I       +ARV     
Sbjct: 739 PLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCP 798

Query: 439 --------------LKDNSVITSLDLAYNP--IGADGAKALSEVLKFHGNINTLKLGWCQ 482
                         L      T+ +L   P    +DG +  ++         TL+L  CQ
Sbjct: 799 TVRMLQAREADLIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSL-----TLRLQKCQ 853

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +    AE +  +L+    +  +DL  N L DEG + +A++   ++ A   +DL+ N +  
Sbjct: 854 LQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIA-RKLDLSDNGLSV 912

Query: 543 DGAFAIAQALKA 554
            G   + +A+ A
Sbjct: 913 AGVHCVLRAVSA 924



 Score = 49.3 bits (116), Expect = 0.006,   Method: Composition-based stats.
 Identities = 101/454 (22%), Positives = 175/454 (38%), Gaps = 69/454 (15%)

Query: 197  FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
            F    ++   +++F  +L     L  ++LS N +GD G++CL + L        L LS  
Sbjct: 1222 FTGCSLSQEHVESFCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPISGLLDLSHN 1281

Query: 257  DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
             +  E A  + E L   S  RV E + N+     F        E+   ++L L+      
Sbjct: 1282 SVSQESALYLVETLP--SCPRVREASVNLGSEQSFR--IHFSREDQAGKTLRLSECSFRP 1337

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS------GLSS---------RKGKL 361
               + LA GL  +  L EL L    +G + +  L+S      GL S         R G L
Sbjct: 1338 EHVSRLATGLSQSLQLTELTLTQCCLGQKQLAILLSLVGRPAGLFSLRVQEPWADRAGVL 1397

Query: 362  AVLDIGNN--------SISAK-----------------------------GAFH---VAE 381
            ++L++           SIS                               GA H   V +
Sbjct: 1398 SLLEVCAQASGSVTEISISETQQQLCVQLEFPRQEENPEAVALRLAHCDLGAHHSLLVGQ 1457

Query: 382  YIKNCK-----SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             ++ C      SL  +NL  +D  D  +  +   L     + T  L  + + ++G + +A
Sbjct: 1458 LMETCARLQQLSLSQVNLCEDD--DASSLLLQSLLLSLSELKTFRLTSSCVSTEGLAHLA 1515

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
              L     +  LDL+ N    +G KAL   L+    +  L L    + +S    +   L 
Sbjct: 1516 SGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLALLTHRLS 1575

Query: 497  YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            +   +  L L  N + D G   L+++ +    +L  +DL+ N+I D G   +A  L    
Sbjct: 1576 HMTCLQSLRLNRNSIGDVGCCHLSEALRAAT-SLEELDLSHNQIGDAGVQHLATILPGLP 1634

Query: 557  DVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
            +  +  ++L+ N ++  G   L ++  L   + E
Sbjct: 1635 E--LRKIDLSVNSISSAGGVQLAESLVLCRRLEE 1666


>gi|434403643|ref|YP_007146528.1| hypothetical protein Cylst_1568 [Cylindrospermum stagnale PCC 7417]
 gi|428257898|gb|AFZ23848.1| hypothetical protein Cylst_1568 [Cylindrospermum stagnale PCC 7417]
          Length = 388

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 153/294 (52%), Gaps = 21/294 (7%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L    +G  G + + + L  N  +  L L +  + + GA  +A+L++ N  L V+ L 
Sbjct: 54  LDLCKQGLGYLGFQPIAEALAANKTIASLLLGTNGIGNAGAADVAKLIECNQHLEVVYLG 113

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +  + LA AL +N+++  L L  N  G  GA+ +A+ L  N S+R L L   +I
Sbjct: 114 CNQI--ADISELANALTKNTSVTGLWLKRNPIGLSGASFIAEMLCHNHSIRTLDLVNTNI 171

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD+G+  ++  L  +   +  L +G N I  KGA  +A  ++   ++  I L +ND+GD 
Sbjct: 172 GDQGLAIIIDALIHQNRTVERLYLGGNQIDCKGAQLLATLLRKNSAIKAILLNVNDLGDA 231

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  +A+AL+QN T+  + +  N I  +G   +   ++ +  + ++DL Y          
Sbjct: 232 GAVALAEALQQNHTLVELGVASNGITPQGGIRLIEAIQKHPALVNVDLGY---------- 281

Query: 463 LSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
            S+  +  G I N+L       G +GAE +A++L  N T+  ++LR NG+ ++G
Sbjct: 282 -SQSTRVLGAIANSL-------GDAGAEAIANLLVNNQTLRKINLRRNGITEQG 327



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 152/312 (48%), Gaps = 46/312 (14%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L    + Y GF  +AEAL  N TI SL L  N  G  GA  +AK +E N+ L  ++L 
Sbjct: 54  LDLCKQGLGYLGFQPIAEALAANKTIASLLLGTNGIGNAGAADVAKLIECNQHLEVVYLG 113

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N I D  I  L + L+ +   +  L +  N I   GA  +AE + +  S+  ++L   +
Sbjct: 114 CNQIAD--ISELANALT-KNTSVTGLWLKRNPIGLSGASFIAEMLCHNHSIRTLDLVNTN 170

Query: 399 IGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           IGD+G   I DAL  QNRT+  + LGGN I  KGA  +A +L+ NS I ++ L  N +G 
Sbjct: 171 IGDQGLAIIIDALIHQNRTVERLYLGGNQIDCKGAQLLATLLRKNSAIKAILLNVNDLGD 230

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
            GA AL+E L+                             N+T+  L + +NG+  +G  
Sbjct: 231 AGAVALAEALQ----------------------------QNHTLVELGVASNGITPQGGI 262

Query: 518 CLAQSFKVVNEALTSIDLAF-----------NEIRDDGAFAIAQALKANEDVAVTSLNLA 566
            L ++ +  + AL ++DL +           N + D GA AIA  L  N+   +  +NL 
Sbjct: 263 RLIEAIQ-KHPALVNVDLGYSQSTRVLGAIANSLGDAGAEAIANLLVNNQ--TLRKINLR 319

Query: 567 NNFLTKFGQSAL 578
            N +T+ G+ +L
Sbjct: 320 RNGITEQGKLSL 331



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 140/296 (47%), Gaps = 15/296 (5%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+  +  G  G   +AE+L  N+T   +    NGI  AG      +++ N  L+ + L 
Sbjct: 54  LDLCKQGLGYLGFQPIAEALAANKTIASLLLGTNGIGNAGAADVAKLIECNQHLEVVYLG 113

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I D  +  L + L  N  V  L L    +   GA  IAE+L +N  +R L+L N  I
Sbjct: 114 CNQIAD--ISELANALTKNTSVTGLWLKRNPIGLSGASFIAEMLCHNHSIRTLDLVNTNI 171

Query: 287 DYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
              G   + +AL+ +N T+  L+L GN     GA  LA  L  N +++ + L+ N +GD 
Sbjct: 172 GDQGLAIIIDALIHQNRTVERLYLGGNQIDCKGAQLLATLLRKNSAIKAILLNVNDLGDA 231

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL----------- 394
           G  AL   L      L  L + +N I+ +G   + E I+   +L+ ++L           
Sbjct: 232 GAVALAEALQQNH-TLVELGVASNGITPQGGIRLIEAIQKHPALVNVDLGYSQSTRVLGA 290

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
             N +GD GAE IA+ L  N+T+  I+L  N I  +G  ++   L+ N  I  L L
Sbjct: 291 IANSLGDAGAEAIANLLVNNQTLRKINLRRNGITEQGKLSLIAGLQHNRTIRQLIL 346



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 133/288 (46%), Gaps = 16/288 (5%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +S+ +     G+ G   +A+ +  NQ  E V    N I  A I      L  N ++ 
Sbjct: 77  KTIASLLLGTNGIGNAGAADVAKLIECNQHLEVVYLGCNQI--ADISELANALTKNTSVT 134

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRVLE 280
            L L  NPIG  G   + ++L  N  +  L L + ++ D+G A  I  L+  N  +  L 
Sbjct: 135 GLWLKRNPIGLSGASFIAEMLCHNHSIRTLDLVNTNIGDQGLAIIIDALIHQNRTVERLY 194

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N ID  G   LA  L +NS I+++ LN N  G  GA ALA+ L+ N +L EL +  N
Sbjct: 195 LGGNQIDCKGAQLLATLLRKNSAIKAILLNVNDLGDAGAVALAEALQQNHTLVELGVASN 254

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGN-----------NSISAKGAFHVAEYIKNCKSL 389
            I  +G   L+  +      L  +D+G            NS+   GA  +A  + N ++L
Sbjct: 255 GITPQGGIRLIEAIQKHPA-LVNVDLGYSQSTRVLGAIANSLGDAGAEAIANLLVNNQTL 313

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
             INL  N I ++G   +   L+ NRTI  + L G   HS+  + I R
Sbjct: 314 RKINLRRNGITEQGKLSLIAGLQHNRTIRQLILDGKQ-HSQITALIQR 360



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 4/190 (2%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L    +G  G + IA+AL  N+TI ++ LG N I + GA+ +A++++ N  +  + L 
Sbjct: 54  LDLCKQGLGYLGFQPIAEALAANKTIASLLLGTNGIGNAGAADVAKLIECNQHLEVVYLG 113

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I AD ++ L+  L  + ++  L L    IG SGA F+A+ML +N++I  LDL    +
Sbjct: 114 CNQI-ADISE-LANALTKNTSVTGLWLKRNPIGLSGASFIAEMLCHNHSIRTLDLVNTNI 171

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            D+G   +  +    N  +  + L  N+I   GA  +A  L+ N  +    LN+  N L 
Sbjct: 172 GDQGLAIIIDALIHQNRTVERLYLGGNQIDCKGAQLLATLLRKNSAIKAILLNV--NDLG 229

Query: 572 KFGQSALTDA 581
             G  AL +A
Sbjct: 230 DAGAVALAEA 239



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 16/228 (7%)

Query: 154 LNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           ++E A  L   +SV    +     G  G  F+AE L +N +   +      I   G+   
Sbjct: 120 ISELANALTKNTSVTGLWLKRNPIGLSGASFIAEMLCHNHSIRTLDLVNTNIGDQGLAII 179

Query: 211 -DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
            D ++  N  ++ L L GN I  +G + L  +L  N+ ++ + L+  DL D GA A+AE 
Sbjct: 180 IDALIHQNRTVERLYLGGNQIDCKGAQLLATLLRKNSAIKAILLNVNDLGDAGAVALAEA 239

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN-----------GNYGGALG 318
           L+ N  L  L + +N I   G   L EA+ ++  + ++ L             N  G  G
Sbjct: 240 LQQNHTLVELGVASNGITPQGGIRLIEAIQKHPALVNVDLGYSQSTRVLGAIANSLGDAG 299

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS-SRKGKLAVLD 365
           A A+A  L  N++LR+++L  N I ++G  +L++GL  +R  +  +LD
Sbjct: 300 AEAIANLLVNNQTLRKINLRRNGITEQGKLSLIAGLQHNRTIRQLILD 347



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 17/160 (10%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L    ++  A  ++ ++  + GD G   LAE+L  N T  E+  A+NGIT  G     
Sbjct: 206 QLLATLLRKNSAIKAILLNVNDLGDAGAVALAEALQQNHTLVELGVASNGITPQGGIRLI 265

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             +Q + AL  ++L  +    +  + L  I             +  L D GA+AIA LL 
Sbjct: 266 EAIQKHPALVNVDLGYS----QSTRVLGAI-------------ANSLGDAGAEAIANLLV 308

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           NN  LR + L  N I   G  SL   L  N TIR L L+G
Sbjct: 309 NNQTLRKINLRRNGITEQGKLSLIAGLQHNRTIRQLILDG 348


>gi|156355996|ref|XP_001623718.1| predicted protein [Nematostella vectensis]
 gi|156210444|gb|EDO31618.1| predicted protein [Nematostella vectensis]
          Length = 401

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 130/254 (51%), Gaps = 10/254 (3%)

Query: 332 LRELH------LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           LR+LH      +H N +G  G  A+   L  +  K+  L+I NN I  +GA ++++ +  
Sbjct: 21  LRQLHKPEMNLMHYN-LGPRGAEAVAVALM-QNTKVLTLNISNNDIQEEGAIYISKMLTE 78

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
              +  +++  N++  +GA  +++ L+QN  I  ++L  N    K    I   +KDN  +
Sbjct: 79  NFYITELDISNNNLQSQGAYAVSEMLRQNSEILEVNLSENKFIEKDVEPIVEAMKDNYTL 138

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            SL+L+ N     G + L   L  +  +  L L W QI   GA  +   LR+N ++  LD
Sbjct: 139 KSLNLSRNAFCEIGGQLLGPALDANVGLEYLNLRWNQIRRKGAVAIGYGLRHNCSLKSLD 198

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           L  NG  D+GAK + ++   +N  LT +D++ N I  +GA +IA  L  NE + +  + +
Sbjct: 199 LSWNGFADDGAKSVGEAL-ALNTTLTELDISSNRISGEGASSIAAGLAKNETLQILRIGI 257

Query: 566 ANNFLTKFGQSALT 579
            N FL++  Q  L+
Sbjct: 258 -NPFLSQGAQDILS 270



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 149/316 (47%), Gaps = 36/316 (11%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E++     +   G +A    L  N  + TLN+S N I +EG   +  +L +N  +  L +
Sbjct: 28  EMNLMHYNLGPRGAEAVAVALMQNTKVLTLNISNNDIQEEGAIYISKMLTENFYITELDI 87

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           S+ +L+ +GA A++E+L+ NS +  + L+ N         + EA+ +N T++SL+L+ N 
Sbjct: 88  SNNNLQSQGAYAVSEMLRQNSEILEVNLSENKFIEKDVEPIVEAMKDNYTLKSLNLSRNA 147

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
              +G   L   L+ N  L  L+L  N I              RKG +A+          
Sbjct: 148 FCEIGGQLLGPALDANVGLEYLNLRWNQI-------------RRKGAVAI---------G 185

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            G  H      NC SL  ++L  N   D+GA+ + +AL  N T+T +D+  N I  +GAS
Sbjct: 186 YGLRH------NC-SLKSLDLSWNGFADDGAKSVGEALALNTTLTELDISSNRISGEGAS 238

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           +IA  L  N  +  L +  NP  + GA+ +   +  + N    +LG+  I  + +EF  D
Sbjct: 239 SIAAGLAKNETLQILRIGINPFLSQGAQDILSAVHQNPNSAIEELGFDDIPVN-SEF-ED 296

Query: 494 MLRYNNTISILDLRAN 509
            L       ++D R N
Sbjct: 297 FLE-----EVMDARPN 307



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 1/215 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+S  N   +G + ++E L  N    EV+ + N      ++     ++ N  LK+L
Sbjct: 82  ITELDISNNNLQSQGAYAVSEMLRQNSEILEVNLSENKFIEKDVEPIVEAMKDNYTLKSL 141

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLS N   + G + L   L  N G+E L L    +R +GA AI   L++N  L+ L+L+ 
Sbjct: 142 NLSRNAFCEIGGQLLGPALDANVGLEYLNLRWNQIRRKGAVAIGYGLRHNCSLKSLDLSW 201

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G  S+ EAL  N+T+  L ++ N     GA+++A GL  N++L+ L +  N   
Sbjct: 202 NGFADDGAKSVGEALALNTTLTELDISSNRISGEGASSIAAGLAKNETLQILRIGINPFL 261

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            +G + ++S +       A+ ++G + I     F 
Sbjct: 262 SQGAQDILSAVHQNPNS-AIEELGFDDIPVNSEFE 295



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K   +  + + E  K+     S+++S   F + G   L  +L  N   E ++   N I  
Sbjct: 119 KFIEKDVEPIVEAMKDNYTLKSLNLSRNAFCEIGGQLLGPALDANVGLEYLNLRWNQIRR 178

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G  A    L+ N +LK+L+LS N   D+G K + + L  N  +  L +SS  +  EGA 
Sbjct: 179 KGAVAIGYGLRHNCSLKSLDLSWNGFADDGAKSVGEALALNTTLTELDISSNRISGEGAS 238

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           +IA  L  N  L++L +  N     G   +  A+ +N
Sbjct: 239 SIAAGLAKNETLQILRIGINPFLSQGAQDILSAVHQN 275


>gi|443732119|gb|ELU16968.1| hypothetical protein CAPTEDRAFT_151888 [Capitella teleta]
          Length = 373

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 150/284 (52%), Gaps = 9/284 (3%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L +N  V  L L   ++ D G+K IA+LL+  + L  L L NN I   G   +A+ALL+N
Sbjct: 29  LRNNIFVTALDLRYNNITDVGSKHIAKLLEETATLEELNLMNNDIGEEGAKDIAQALLKN 88

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            T++ L ++GN  G  G    A+ L+ N +L EL L    +  + + AL + L +    L
Sbjct: 89  ETLKKLRMSGNKIGFKGGMCFAQTLQINTTLEELDLGDTDLTTDCVIALATVLRA-NSTL 147

Query: 362 AVLDIGNNSI----SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
             L+  N  I      +   H A  +K  +SL  ++L   D+ D G  ++++ L  N T+
Sbjct: 148 KSLN-ANRPILFSHQEETTVHFANMLKVNRSLKELHLMKYDMRDFGITRLSEKLVDNMTL 206

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-KFHGNINTL 476
           T ++L  N I   GA  ++++L+ ++ +  +DL++N +G DGA  ++E L  F+ N+ TL
Sbjct: 207 TYLNLSCNRITRDGAKELSKLLRKDTALKVIDLSFNRLGDDGAIDIAEALMTFNTNLQTL 266

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
            +   +I A G   +A+ L+ N+T+  + +  N L  E   C+A
Sbjct: 267 VITSNEIRAKGLCALANALQMNSTLDNIYIWGNCL--EEPACIA 308



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 133/285 (46%), Gaps = 27/285 (9%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           +++D+   N  D G   +A+ L    T EE++   N I   G K     L  N  LK L 
Sbjct: 36  TALDLRYNNITDVGSKHIAKLLEETATLEELNLMNNDIGEEGAKDIAQALLKNETLKKLR 95

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           +SGN IG +G  C    L  N  +E L L   DL  +   A+A +L+ NS L+ L  N  
Sbjct: 96  MSGNKIGFKGGMCFAQTLQINTTLEELDLGDTDLTTDCVIALATVLRANSTLKSLNANRP 155

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           ++    F+   E         ++H              A  L+ N+SL+ELHL    + D
Sbjct: 156 IL----FSHQEET--------TVH-------------FANMLKVNRSLKELHLMKYDMRD 190

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            GI  L   L      L  L++  N I+  GA  +++ ++   +L  I+L  N +GD+GA
Sbjct: 191 FGITRLSEKLVDNM-TLTYLNLSCNRITRDGAKELSKLLRKDTALKVIDLSFNRLGDDGA 249

Query: 405 EKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             IA+AL   N  + T+ +  N I +KG  A+A  L+ NS + ++
Sbjct: 250 IDIAEALMTFNTNLQTLVITSNEIRAKGLCALANALQMNSTLDNI 294



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 6/213 (2%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           +  LD+  N+I+  G+ H+A+ ++   +L  +NL  NDIG+EGA+ IA AL +N T+  +
Sbjct: 35  VTALDLRYNNITDVGSKHIAKLLEETATLEELNLMNNDIGEEGAKDIAQALLKNETLKKL 94

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            + GN I  KG    A+ L+ N+ +  LDL    +  D   AL+ VL+ +  + +L    
Sbjct: 95  RMSGNKIGFKGGMCFAQTLQINTTLEELDLGDTDLTTDCVIALATVLRANSTLKSLNANR 154

Query: 481 CQIGASGAE---FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
             + +   E     A+ML+ N ++  L L    +RD G   L++   V N  LT ++L+ 
Sbjct: 155 PILFSHQEETTVHFANMLKVNRSLKELHLMKYDMRDFGITRLSEKL-VDNMTLTYLNLSC 213

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
           N I  DGA  +++ L+  +D A+  ++L+ N L
Sbjct: 214 NRITRDGAKELSKLLR--KDTALKVIDLSFNRL 244



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 133/312 (42%), Gaps = 34/312 (10%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           +E      +++   + G+EG   +A++L  N+T                           
Sbjct: 58  EETATLEELNLMNNDIGEEGAKDIAQALLKNET--------------------------- 90

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            LK L +SGN IG +G  C    L  N  +E L L   DL  +   A+A +L+ NS L+ 
Sbjct: 91  -LKKLRMSGNKIGFKGGMCFAQTLQINTTLEELDLGDTDLTTDCVIALATVLRANSTLKS 149

Query: 279 LELNNNMI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  N  ++           A  L  N +++ LHL        G   L++ L  N +L  L
Sbjct: 150 LNANRPILFSHQEETTVHFANMLKVNRSLKELHLMKYDMRDFGITRLSEKLVDNMTLTYL 209

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINL 394
           +L  N I  +G + L S L  +   L V+D+  N +   GA  +AE +    + L  + +
Sbjct: 210 NLSCNRITRDGAKEL-SKLLRKDTALKVIDLSFNRLGDDGAIDIAEALMTFNTNLQTLVI 268

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N+I  +G   +A+AL+ N T+  I + GN +      A A ++ D+  I   +    P
Sbjct: 269 TSNEIRAKGLCALANALQMNSTLDNIYIWGNCLEEPACIAFAGLI-DSGRIALKNTDVEP 327

Query: 455 IGADGAKALSEV 466
              DG   LSE+
Sbjct: 328 YVVDGTTYLSEL 339



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 32/211 (15%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + D  AE I   L+ N  +T +DL  NNI   G+  IA++L++ + +  L+L  N IG +
Sbjct: 17  LDDAQAEIIYKWLRNNIFVTALDLRYNNITDVGSKHIAKLLEETATLEELNLMNNDIGEE 76

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GAK +++ L  +  +  L++   +IG  G    A  L+ N T+  LDL    L  +    
Sbjct: 77  GAKDIAQALLKNETLKKLRMSGNKIGFKGGMCFAQTLQINTTLEELDLGDTDLTTDCVIA 136

Query: 519 LAQSFKV------------------------------VNEALTSIDLAFNEIRDDGAFAI 548
           LA   +                               VN +L  + L   ++RD G   +
Sbjct: 137 LATVLRANSTLKSLNANRPILFSHQEETTVHFANMLKVNRSLKELHLMKYDMRDFGITRL 196

Query: 549 AQALKANEDVAVTSLNLANNFLTKFGQSALT 579
           ++ L  N  + +T LNL+ N +T+ G   L+
Sbjct: 197 SEKLVDN--MTLTYLNLSCNRITRDGAKELS 225



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 4/135 (2%)

Query: 146 LFRESKQTLNEFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           LF   ++T   FA  L   R+   + +   +  D G+  L+E L  N T   ++ + N I
Sbjct: 157 LFSHQEETTVHFANMLKVNRSLKELHLMKYDMRDFGITRLSEKLVDNMTLTYLNLSCNRI 216

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDE 261
           T  G K    +L+ + ALK ++LS N +GD+G   + + L+  N  ++ L ++S ++R +
Sbjct: 217 TRDGAKELSKLLRKDTALKVIDLSFNRLGDDGAIDIAEALMTFNTNLQTLVITSNEIRAK 276

Query: 262 GAKAIAELLKNNSIL 276
           G  A+A  L+ NS L
Sbjct: 277 GLCALANALQMNSTL 291


>gi|224062521|ref|XP_002300846.1| predicted protein [Populus trichocarpa]
 gi|222842572|gb|EEE80119.1| predicted protein [Populus trichocarpa]
          Length = 543

 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 138/275 (50%), Gaps = 1/275 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF+ +L++   L+ L L  + I +E  + +C+++     ++ L   +    
Sbjct: 225 NALGEKGVRAFEKLLKTQNNLEELYLINDGISEEAARAVCELIPSTEKLKVLHFHNNMTG 284

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGA AIAE++K ++ L     ++  +   G  +LAEAL   + +R L L  N  G    
Sbjct: 285 DEGAVAIAEMVKRSTALEDFRCSSTRVGLEGGVALAEALGSCNHLRKLDLRDNMFGVEAG 344

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL++ L     L E +L   ++ DEG  AL + L      L VLD+  N I+AKGA  +
Sbjct: 345 IALSRSLFAFADLTEAYLSYLNLEDEGAEALANALKECAPSLEVLDMAGNDITAKGASSL 404

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARV 438
           A  I   + L  +NL  N++ DEGA  IA A++     +  +DL  N I   GA  +A+ 
Sbjct: 405 AACIAAKQFLTKLNLSENELKDEGAILIAKAIEVGHGQLNEVDLSINAIRRAGARLLAQA 464

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           + D     SL++  N I  +G   + ++ K   N+
Sbjct: 465 VVDKPGFKSLNINGNYISDEGIDEVKDIFKGLPNV 499



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 154/317 (48%), Gaps = 31/317 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L+ LNLS N +G++GV+    +L     +E L L +  + +E A+A+ EL+ +   L+VL
Sbjct: 217 LRYLNLSNNALGEKGVRAFEKLLKTQNNLEELYLINDGISEEAARAVCELIPSTEKLKVL 276

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  ++ +     +    G  G  ALA+ L     LR+L L  
Sbjct: 277 HFHNNMTGDEGAVAIAEMVKRSTALEDFRCSSTRVGLEGGVALAEALGSCNHLRKLDLRD 336

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E      +G++  +   A  D+    +S                      Y+N +
Sbjct: 337 NMFGVE------AGIALSRSLFAFADLTEAYLS----------------------YLN-L 367

Query: 400 GDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGAE +A+ALK+   ++  +D+ GN+I +KGAS++A  +     +T L+L+ N +  +
Sbjct: 368 EDEGAEALANALKECAPSLEVLDMAGNDITAKGASSLAACIAAKQFLTKLNLSENELKDE 427

Query: 459 GAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           GA  +++ ++  HG +N + L    I  +GA  +A  +        L++  N + DEG  
Sbjct: 428 GAILIAKAIEVGHGQLNEVDLSINAIRRAGARLLAQAVVDKPGFKSLNINGNYISDEGID 487

Query: 518 CLAQSFKVVNEALTSID 534
            +   FK +   L ++D
Sbjct: 488 EVKDIFKGLPNVLENLD 504



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 140/283 (49%), Gaps = 4/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE   +R L+L+ N  G  G  A  K L+   +L EL+L  + I +E  RA+   + S +
Sbjct: 212 LEGCNLRYLNLSNNALGEKGVRAFEKLLKTQNNLEELYLINDGISEEAARAVCELIPSTE 271

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE +K   +L         +G EG   +A+AL     + 
Sbjct: 272 -KLKVLHFHNNMTGDEGAVAIAEMVKRSTALEDFRCSSTRVGLEGGVALAEALGSCNHLR 330

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLK 477
            +DL  N    +   A++R L   + +T   L+Y  +  +GA+AL+  LK    ++  L 
Sbjct: 331 KLDLRDNMFGVEAGIALSRSLFAFADLTEAYLSYLNLEDEGAEALANALKECAPSLEVLD 390

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I A GA  +A  +     ++ L+L  N L+DEGA  +A++ +V +  L  +DL+ 
Sbjct: 391 MAGNDITAKGASSLAACIAAKQFLTKLNLSENELKDEGAILIAKAIEVGHGQLNEVDLSI 450

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N IR  GA  +AQA+   +     SLN+  N+++  G   + D
Sbjct: 451 NAIRRAGARLLAQAVV--DKPGFKSLNINGNYISDEGIDEVKD 491


>gi|326435597|gb|EGD81167.1| hypothetical protein PTSG_11207 [Salpingoeca sp. ATCC 50818]
          Length = 1485

 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 100/164 (60%), Gaps = 3/164 (1%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           IDLGG  +   GA A+A  LKDN+ + +LDLA N IG +GA AL+E+LK +  +  L L 
Sbjct: 41  IDLGGYGLGDIGARAVAEALKDNTCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLN 100

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
              IG  GA  +A+ML++N T++ L L  N + DEGA  LA+  +  N  +T + L+ N 
Sbjct: 101 NNSIGDEGAVALAEMLKHNMTMTWLRLERNSIGDEGAVALAEMLE-HNTTMTLLALSENS 159

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
           I  +GA A+A+ LK N    +T+L+L NN +T  G +AL  A D
Sbjct: 160 IGPEGAVALAEMLKHN--TTLTALDLDNNSITPVGGAALGAALD 201



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 97/175 (55%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+ G   GD G   +AE+L  N   E +  A N I   G  A   +L+ N  LK LNL+
Sbjct: 41  IDLGGYGLGDIGARAVAEALKDNTCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLN 100

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGDEG   L ++L  N  +  L+L    + DEGA A+AE+L++N+ + +L L+ N I
Sbjct: 101 NNSIGDEGAVALAEMLKHNMTMTWLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSI 160

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              G  +LAE L  N+T+ +L L+ N    +G  AL   L+ N++L EL +  NS
Sbjct: 161 GPEGAVALAEMLKHNTTLTALDLDNNSITPVGGAALGAALDQNRTLEELCIEKNS 215



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 92/156 (58%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +D+G   +   GA  VAE +K+   L  ++L +N IGDEGA  +A+ LK N T+  ++L 
Sbjct: 41  IDLGGYGLGDIGARAVAEALKDNTCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLN 100

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N+I  +GA A+A +LK N  +T L L  N IG +GA AL+E+L+ +  +  L L    I
Sbjct: 101 NNSIGDEGAVALAEMLKHNMTMTWLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSI 160

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           G  GA  +A+ML++N T++ LDL  N +   G   L
Sbjct: 161 GPEGAVALAEMLKHNTTLTALDLDNNSITPVGGAAL 196



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 101/190 (53%), Gaps = 2/190 (1%)

Query: 187 GYNQTAEEV-SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           G  +  EEV +  A      G+K     + +N     ++L G  +GD G + + + L DN
Sbjct: 4   GEKRAREEVEALLAQTKVKDGVKNKIRAIANNTCPGGIDLGGYGLGDIGARAVAEALKDN 63

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             +E L L+   + DEGA A+AE+LK+N+ L++L LNNN I   G  +LAE L  N T+ 
Sbjct: 64  TCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLNNNSIGDEGAVALAEMLKHNMTMT 123

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            L L  N  G  GA ALA+ LE N ++  L L  NSIG EG  AL   L      L  LD
Sbjct: 124 WLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSIGPEGAVALAEML-KHNTTLTALD 182

Query: 366 IGNNSISAKG 375
           + NNSI+  G
Sbjct: 183 LDNNSITPVG 192



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 118/241 (48%), Gaps = 12/241 (4%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L G  +GD G RA+   L      L  LD+  NSI  +GA  +AE +K+  +L  +NL  
Sbjct: 43  LGGYGLGDIGARAVAEALKDNTC-LETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLNN 101

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IGDEGA  +A+ LK N T+T + L  N+I  +GA A+A +L+ N+ +T L L+ N IG
Sbjct: 102 NSIGDEGAVALAEMLKHNMTMTWLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSIG 161

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            +GA AL+E+LK +  +  L L    I   G   +   L  N T+  L +  N      A
Sbjct: 162 PEGAVALAEMLKHNTTLTALDLDNNSITPVGGAALGAALDQNRTLEELCIEKNST--ATA 219

Query: 517 KCLAQSFKVVNEALTSI------DLAFNEIRDDGAFAIAQALKANED---VAVTSLNLAN 567
           +    +  V  E  T          AFNE R++      Q   A  D    AVTSL   +
Sbjct: 220 RAFGAALPVDRELSTDWYDDDGGQAAFNEAREEQKRQHEQLFAACRDGDTPAVTSLIEQD 279

Query: 568 N 568
           N
Sbjct: 280 N 280



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 7/172 (4%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  K+     ++D++  + GDEG   LAE L +N T + ++   N I   G  A   +L+
Sbjct: 58  EALKDNTCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLNNNSIGDEGAVALAEMLK 117

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N+ +  L L  N IGDEG   L ++L  N  +  L LS   +  EGA A+AE+LK+N+ 
Sbjct: 118 HNMTMTWLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSIGPEGAVALAEMLKHNTT 177

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN-------YGGALGAN 320
           L  L+L+NN I   G  +L  AL +N T+  L +  N       +G AL  +
Sbjct: 178 LTALDLDNNSITPVGGAALGAALDQNRTLEELCIEKNSTATARAFGAALPVD 229


>gi|426382277|ref|XP_004057734.1| PREDICTED: protein NLRC5 [Gorilla gorilla gorilla]
          Length = 1866

 Score =  108 bits (270), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 163/346 (47%), Gaps = 14/346 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1497 KTFRLTSSCVSTEGLARLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1556

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L   + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1557 LSHLLLNSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1617 QIGDAGVQHLATILPGLP-ELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1675

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1676 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 1731

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE A 
Sbjct: 1732 -----VLRFCKELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAA 1786

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
             LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1787 ELAQVLPQMGR-LKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRL 1831



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 95/341 (27%), Positives = 139/341 (40%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
            EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 1509 EGLARLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 1568

Query: 228  -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                               N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1569 LLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL---------------LENST---------- 303
            +L     LR ++L+ N I  +G   LAE+L               L + T          
Sbjct: 1629 ILPGLPELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 1688

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    +R            L 
Sbjct: 1689 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLR-----FCKELPLLR 1743

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             +D+ +  I  + A  +     +C +L  I L  N +GDE A ++A  L Q   +  +DL
Sbjct: 1744 QIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDL 1803

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1804 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHL 1844



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 72/271 (26%), Positives = 110/271 (40%), Gaps = 35/271 (12%)

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            G   LA GL     L EL L  N   +EG +ALM  L   K  L  LD+ +  +++    
Sbjct: 1510 GLARLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEG-KWMLKRLDLSHLLLNSSTLA 1568

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
             +   + +   L  + L  N IGD G   +++AL+   ++  +DL  N I   G   +A 
Sbjct: 1569 LLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628

Query: 438  VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            +L     +  +DL+ N I + G   L+E L     +  L LG                  
Sbjct: 1629 ILPGLPELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLG------------------ 1670

Query: 498  NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN-- 555
                       N L D  A  LAQ      + L  + L F+ +   GA ++AQAL  +  
Sbjct: 1671 ----------CNALGDPTALGLAQELP---QHLRVLHLPFSHLGPGGALSLAQALDGSPH 1717

Query: 556  -EDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
             E++++   NLA   L    +  L    DLV
Sbjct: 1718 LEEISLAENNLAGGVLRFCKELPLLRQIDLV 1748



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 5/216 (2%)

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++ +S +G   +A  + +C  L  ++L  N   +EG + +  AL+    +  +DL    +
Sbjct: 1503 SSCVSTEGLARLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLL 1562

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG +G
Sbjct: 1563 NSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAG 1622

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
             + +A +L     +  +DL  N +   G   LA+S  V+   L  + L  N + D  A  
Sbjct: 1623 VQHLATILPGLPELRKIDLSVNSISSAGGVQLAESL-VLCRRLEELMLGCNALGDPTALG 1681

Query: 548  IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            +AQ L  +  V    L+L  + L   G  +L  A D
Sbjct: 1682 LAQELPQHLRV----LHLPFSHLGPGGALSLAQALD 1713



 Score = 50.4 bits (119), Expect = 0.002,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 102/252 (40%), Gaps = 28/252 (11%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L G   +  L       GD    AL   L +  G+L +L +  + I+A+G  H+ + +
Sbjct: 680 EALVGCGQIENLSFKSRKCGDAFAEALSRSLPTM-GRLQMLGLAGSKITARGISHLVKAL 738

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV----- 438
             C  L  ++   N + D+    I + L     +  +DL  N+I       +ARV     
Sbjct: 739 PLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCP 798

Query: 439 --------------LKDNSVITSLDLAYNP--IGADGAKALSEVLKFHGNINTLKLGWCQ 482
                         L      T+ +L   P    +DG +  ++         TL+L  CQ
Sbjct: 799 TVRMLQAREADLIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSL-----TLRLQKCQ 853

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +    AE +  +L+    +  +DL  N L DEG + +A++   ++     +DL+ N +  
Sbjct: 854 LQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLH-ITRKLDLSDNGLSV 912

Query: 543 DGAFAIAQALKA 554
            G   + +A+ A
Sbjct: 913 AGVHCVLRAMSA 924



 Score = 47.8 bits (112), Expect = 0.015,   Method: Composition-based stats.
 Identities = 100/454 (22%), Positives = 175/454 (38%), Gaps = 69/454 (15%)

Query: 197  FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
            F    ++   +++F  +L     L  ++LS N +GD G++CL + L        L LS  
Sbjct: 1222 FTGCSLSQEHVESFCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPISGLLDLSHN 1281

Query: 257  DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
             +  E A  + E L   S  RV E + N+     F        E+   ++L L+      
Sbjct: 1282 SVSQESALYLVETLP--SCPRVREASVNLGSEQSFR--IHFSREDQAGKTLRLSECSFQP 1337

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM------SGLSS---------RKGKL 361
               + LA GL  +  L EL L    +G + +  L+      +GL S         R G L
Sbjct: 1338 EHVSRLATGLSQSLQLTELTLTQCCLGQKQLAILLRLVGRPAGLFSLRVQEPWADRAGVL 1397

Query: 362  AVLDIGNN--------SISAK-----------------------------GAFH---VAE 381
            ++L++           SIS                               GA H   V +
Sbjct: 1398 SLLEVCAQASGSVTEISISETQQQLCVQLEFPRQEENPEAVALRLAHCDLGAHHSLLVGQ 1457

Query: 382  YIKNCK-----SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             ++ C      SL  +NL  +D  D  +  +   L     + T  L  + + ++G + +A
Sbjct: 1458 LMETCARLQQLSLSQVNLCEDD--DASSLLLQSLLLSLSELKTFRLTSSCVSTEGLARLA 1515

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
              L     +  LDL+ N    +G KAL   L+    +  L L    + +S    +   L 
Sbjct: 1516 SGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLALLTHRLS 1575

Query: 497  YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            +   +  L L  N + D G   L+++ +    +L  +DL+ N+I D G   +A  L    
Sbjct: 1576 HMTCLQSLRLNRNSIGDVGCCHLSEALRAAT-SLEELDLSHNQIGDAGVQHLATILPGLP 1634

Query: 557  DVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
            +  +  ++L+ N ++  G   L ++  L   + E
Sbjct: 1635 E--LRKIDLSVNSISSAGGVQLAESLVLCRRLEE 1666



 Score = 43.5 bits (101), Expect = 0.34,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 87/224 (38%), Gaps = 19/224 (8%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G      G+  L ++L      +EVSF  N ++   +     VL     L+ L+LS N
Sbjct: 721 LAGSKITARGISHLVKALPLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSN 780

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNM 285
            I    + CL  + V    V  LQ    DL        +  AEL       R  +L  + 
Sbjct: 781 SICVSTLLCLARVAVTCPTVRMLQAREADLIFLLSPPTETTAELQ------RAPDLQESD 834

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G  S +  L        +H          A AL   L+    L E+ L GN + DE
Sbjct: 835 GQRKGAQSRSLTLRLQKCQLQVH---------DAEALIALLQEGPHLEEVDLSGNQLEDE 885

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           G R LM+  +S+      LD+ +N +S  G   V   +  C +L
Sbjct: 886 GCR-LMAEAASQLHITRKLDLSDNGLSVAGVHCVLRAMSACWTL 928


>gi|298712172|emb|CBJ33045.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
          Length = 1998

 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 195/426 (45%), Gaps = 26/426 (6%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            VD+SG     +  + +A+ L  N+T  +++ +AN + +   K      + N  LK L++S
Sbjct: 1106 VDLSGNRMRRKSGYRIADMLLLNKTITDLNLSANALDSGAAKEIFFAARKNQVLKRLDIS 1165

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            GN IG E    L  ++  N       L+ +DL D         L    I+ V        
Sbjct: 1166 GNKIGPEAASGLAGMVTKNR-----SLTYLDLSDNQMGERKFWLPTGEIMHV-------- 1212

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              S   SL +AL  N T+  L + GN  GA   +A A G+  ++SL  L L GN +   G
Sbjct: 1213 -PSAGPSLGDALRYNRTLTVLKVKGNLFGADTGHAFASGVARHRSLTWLVLSGNLLLPGG 1271

Query: 347  IRALMSGL-SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
             +AL   L ++++  L  LD+ +N +  K A   +  +K  ++L  ++L  N++G     
Sbjct: 1272 GKALALRLNAAKRSTLTRLDVSDNHVGKKAATLFSATLKRNRTLRHLDLSRNELGTHAGI 1331

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG--------- 456
              A +L  NRT+ T+ + GN +    A  + + L  NS +  LDL+ N +G         
Sbjct: 1332 AFATSLLVNRTLETLAIAGNGMGPNVAKNLGQSLAKNSSLKDLDLSDNVLGIATAEGGDP 1391

Query: 457  ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            +D   AL   L+ +  + ++ L   ++     + +A+ L  + +++ L L    + D  A
Sbjct: 1392 SDLGLALGHGLRINKTLTSINLSGNRLPTLEMQRIAEGLADHQSLAHLTLTGEAVNDSAA 1451

Query: 517  KCLAQSFKVVNEA-LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
              L +     + A L S+DL+ + +   GA A+ +AL       +  L+L++N L+K   
Sbjct: 1452 LDLGRLIAQASGAGLVSLDLSRSALAGVGAVAVTRALTTGAH-GLERLDLSDNSLSKNAA 1510

Query: 576  SALTDA 581
              L  A
Sbjct: 1511 GELASA 1516



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 177/393 (45%), Gaps = 54/393 (13%)

Query: 174  FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF---------DGVLQSNIALKTLN 224
             G  G   +  +LG N+T EE+  + NG+      A          +G       ++ L+
Sbjct: 1540 LGPVGGALVCRALGGNRTVEELDMSDNGLGPVAGMALARSLRVLYRNGKTVRPCRMRRLD 1599

Query: 225  LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK-AIAELLKNNSI-LRVLELN 282
            +S NP+G+E    +   LV N   + L LS  +LR + A  AI  +L+ ++I L+ L + 
Sbjct: 1600 ISRNPLGNEAGVAILGALV-NECTQHLDLSYTELRGKAAGLAIGRMLRCHTIVLQHLNVE 1658

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +N +   G   +  AL  N+++  L ++ N  GAL       G E +K           +
Sbjct: 1659 HNNLGRHGVNEVFWALRRNASLLHLDISDNGAGAL------FGTEADK-----------L 1701

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
             + G  ++ S LS  +  L  LD+G N +SA+    +   I+  + L  ++L  N + D+
Sbjct: 1702 EEYGTTSINSALSLNQ-TLRFLDLGTNGLSAECGSTLTASIRRNRCLANVSLEYNLLDDQ 1760

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             A      L+++R +  ++L  N +  +G   +A  L  NS +T LD+  N +G  G   
Sbjct: 1761 AASTFGRKLRRDRQMDHLNLNNNRVGWRGGLDLAAGLALNSHLTWLDVGNNKLGEAGM-- 1818

Query: 463  LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
            L++V                    G +F A +++ N T++ L++  N L   G   +A++
Sbjct: 1819 LADV--------------------GGKFAAALVK-NKTLTRLNMEGNTLGPSGGVAIAEA 1857

Query: 523  FKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
                N +L  I+L  N +  D  FA+   LK N
Sbjct: 1858 LHR-NNSLVEINLENNRLDQDVGFALEDLLKVN 1889



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 200/483 (41%), Gaps = 68/483 (14%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT-AAGIKAFDGVLQ-SNIA 219
            +  +S+++SG       +  +AE L  +Q+   ++     +  +A +     + Q S   
Sbjct: 1406 KTLTSINLSGNRLPTLEMQRIAEGLADHQSLAHLTLTGEAVNDSAALDLGRLIAQASGAG 1465

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNA-GVERLQLSSVDLRDEGAKAIAELLKNNSI--- 275
            L +L+LS + +   G   +   L   A G+ERL LS   L    A  +A  L+N+     
Sbjct: 1466 LVSLDLSRSALAGVGAVAVTRALTTGAHGLERLDLSDNSLSKNAAGELASALQNDERGGR 1525

Query: 276  ----LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE---- 327
                +R L L    +   G   +  AL  N T+  L ++ N  G +   ALA+ L     
Sbjct: 1526 AGCGVRFLGLARCGLGPVGGALVCRALGGNRTVEELDMSDNGLGPVAGMALARSLRVLYR 1585

Query: 328  GNKS-----LRELHLHGNSIGDEGIRALMSGL------------SSRKGKLAVLDIG--- 367
              K+     +R L +  N +G+E   A++  L            +  +GK A L IG   
Sbjct: 1586 NGKTVRPCRMRRLDISRNPLGNEAGVAILGALVNECTQHLDLSYTELRGKAAGLAIGRML 1645

Query: 368  -------------NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG-----------DEG 403
                         +N++   G   V   ++   SLL +++  N  G           + G
Sbjct: 1646 RCHTIVLQHLNVEHNNLGRHGVNEVFWALRRNASLLHLDISDNGAGALFGTEADKLEEYG 1705

Query: 404  AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
               I  AL  N+T+  +DLG N + ++  S +   ++ N  + ++ L YN +    A   
Sbjct: 1706 TTSINSALSLNQTLRFLDLGTNGLSAECGSTLTASIRRNRCLANVSLEYNLLDDQAASTF 1765

Query: 464  SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL------RANGLRDEGAK 517
               L+    ++ L L   ++G  G   +A  L  N+ ++ LD+       A  L D G K
Sbjct: 1766 GRKLRRDRQMDHLNLNNNRVGWRGGLDLAAGLALNSHLTWLDVGNNKLGEAGMLADVGGK 1825

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 577
              A   K  N+ LT +++  N +   G  AIA+AL  N   ++  +NL NN L +    A
Sbjct: 1826 FAAALVK--NKTLTRLNMEGNTLGPSGGVAIAEALHRNN--SLVEINLENNRLDQDVGFA 1881

Query: 578  LTD 580
            L D
Sbjct: 1882 LED 1884



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 194/459 (42%), Gaps = 61/459 (13%)

Query: 128  MNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG 187
            + W V +G  LL G  GK        L   A +    + +D+S  + G +     + +L 
Sbjct: 1257 LTWLVLSGNLLLPG-GGKAL-----ALRLNAAKRSTLTRLDVSDNHVGKKAATLFSATLK 1310

Query: 188  YNQTAEEVSFAANGI-TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
             N+T   +  + N + T AGI AF   L  N  L+TL ++GN +G    K L   L  N+
Sbjct: 1311 RNRTLRHLDLSRNELGTHAGI-AFATSLLVNRTLETLAIAGNGMGPNVAKNLGQSLAKNS 1369

Query: 247  GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
             ++ L LS                  +++L +           G  +L   L  N T+ S
Sbjct: 1370 SLKDLDLS------------------DNVLGIATAEGGDPSDLGL-ALGHGLRINKTLTS 1410

Query: 307  LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK-LAVLD 365
            ++L+GN    L    +A+GL  ++SL  L L G ++ D     L   ++   G  L  LD
Sbjct: 1411 INLSGNRLPTLEMQRIAEGLADHQSLAHLTLTGEAVNDSAALDLGRLIAQASGAGLVSLD 1470

Query: 366  IGNNSISAKGAFHVAEYIKN-CKSLLWINLYMNDIGDEGAEKIADALKQNRT-------I 417
            +  ++++  GA  V   +      L  ++L  N +    A ++A AL+ +         +
Sbjct: 1471 LSRSALAGVGAVAVTRALTTGAHGLERLDLSDNSLSKNAAGELASALQNDERGGRAGCGV 1530

Query: 418  TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTL 476
              + L    +   G + + R L  N  +  LD++ N +G     AL+  L+  + N  T+
Sbjct: 1531 RFLGLARCGLGPVGGALVCRALGGNRTVEELDMSDNGLGPVAGMALARSLRVLYRNGKTV 1590

Query: 477  KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            +   C+           M R       LD+  N L +E    +  +  +VNE    +DL+
Sbjct: 1591 RP--CR-----------MRR-------LDISRNPLGNEAGVAILGA--LVNECTQHLDLS 1628

Query: 537  FNEIRDDGA-FAIAQALKANEDVAVTSLNLANNFLTKFG 574
            + E+R   A  AI + L+ +  + +  LN+ +N L + G
Sbjct: 1629 YTELRGKAAGLAIGRMLRCHT-IVLQHLNVEHNNLGRHG 1666



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 117/256 (45%), Gaps = 32/256 (12%)

Query: 334  ELHLHGNSIGDEGIRALMS---GLSSR--------------KGKLAVLDIGNNSISAKGA 376
            ++ L G  +GD G ++L+S    LS +              +  +  +D+  N +  K  
Sbjct: 1059 DVDLAGCGLGDRGYKSLLSICRALSVQATTFTWPSPYTTQVRINVVRVDLSGNRMRRKSG 1118

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            + +A+ +   K++  +NL  N +    A++I  A ++N+ +  +D+ GN I  + AS +A
Sbjct: 1119 YRIADMLLLNKTITDLNLSANALDSGAAKEIFFAARKNQVLKRLDISGNKIGPEAASGLA 1178

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             ++  N  +T LDL+ N +G           KF      L  G      S    + D LR
Sbjct: 1179 GMVTKNRSLTYLDLSDNQMGER---------KFW-----LPTGEIMHVPSAGPSLGDALR 1224

Query: 497  YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            YN T+++L ++ N    +     A      + +LT + L+ N +   G  A+A  L A +
Sbjct: 1225 YNRTLTVLKVKGNLFGADTGHAFASGV-ARHRSLTWLVLSGNLLLPGGGKALALRLNAAK 1283

Query: 557  DVAVTSLNLANNFLTK 572
               +T L++++N + K
Sbjct: 1284 RSTLTRLDVSDNHVGK 1299



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 15/243 (6%)

Query: 193  EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG-----------DEGVKCLCDI 241
            + ++   N +   G+      L+ N +L  L++S N  G           + G   +   
Sbjct: 1653 QHLNVEHNNLGRHGVNEVFWALRRNASLLHLDISDNGAGALFGTEADKLEEYGTTSINSA 1712

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L  N  +  L L +  L  E    +   ++ N  L  + L  N++D    ++    L  +
Sbjct: 1713 LSLNQTLRFLDLGTNGLSAECGSTLTASIRRNRCLANVSLEYNLLDDQAASTFGRKLRRD 1772

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS----R 357
              +  L+LN N  G  G   LA GL  N  L  L +  N +G+ G+ A + G  +    +
Sbjct: 1773 RQMDHLNLNNNRVGWRGGLDLAAGLALNSHLTWLDVGNNKLGEAGMLADVGGKFAAALVK 1832

Query: 358  KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
               L  L++  N++   G   +AE +    SL+ INL  N +  +    + D LK N T+
Sbjct: 1833 NKTLTRLNMEGNTLGPSGGVAIAEALHRNNSLVEINLENNRLDQDVGFALEDLLKVNFTL 1892

Query: 418  TTI 420
             ++
Sbjct: 1893 HSV 1895


>gi|428180756|gb|EKX49622.1| hypothetical protein GUITHDRAFT_58670, partial [Guillardia theta
           CCMP2712]
          Length = 366

 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 175/360 (48%), Gaps = 19/360 (5%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IG E +K L + L  N+ +  L LS   +  EG++ + EL ++N  +  + L+ N +   
Sbjct: 2   IGREEMKHLVEGLKSNSSIHTLDLSMNRIGVEGSQYLRELFQHNLAIADVNLSANELRDK 61

Query: 290 GFTSLAEALLENST------IRSLHLNGNYGGALGANALAKGL-EGNKSLRELHLHGNSI 342
           G +++AE +L N T      +R L L  N     GA AL+  L     S+  L L  N I
Sbjct: 62  GISNVAEGILANKTATRTRPVRRLVLYDNSFSTDGARALSMCLAHAQVSITLLDLSRNPI 121

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           G  G+ + ++        L  L + N  I ++G   +AE I+   SLL + L    +   
Sbjct: 122 GCSGV-SFVADAVFHGCPLVTLLVSNCKIGSEGMIRMAEAIEKTTSLLSLKLQRCPLDPL 180

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL--------KDNSVITSLDLAYNP 454
           GA+ +A  L++N  +  +DL G+ I   G + IA  +        + N+ +TSL +    
Sbjct: 181 GAQHLARMLERNPALLGLDLSGSPILGAGMAEIAASMGGDADTRRERNTRLTSLSVRSCQ 240

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           + A GA  ++ +L  + ++  L LG  +IG  GA  ++  L+ N  ++ L L  N + DE
Sbjct: 241 LHAGGAAHIARMLHSNNHLRRLDLGDNKIGTRGALELSAALQQNFALTELQLGKNEIEDE 300

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           G   L +   V N +L  +DL+ N I D GA A+   L ANE  A++ L +  N LT  G
Sbjct: 301 GCLGLGRCLSV-NLSLRKLDLSDNRIGDGGARALCLGLLANE--AMSELRVEGNVLTSVG 357



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 165/360 (45%), Gaps = 24/360 (6%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           ++ RE  + L E  K   +  ++D+S    G EG  +L E   +N    +V+ +AN +  
Sbjct: 1   QIGREEMKHLVEGLKSNSSIHTLDLSMNRIGVEGSQYLRELFQHNLAIADVNLSANELRD 60

Query: 205 AGIK-AFDGVLQSNIALKT-----LNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVD 257
            GI    +G+L +  A +T     L L  N    +G + L   L      +  L LS   
Sbjct: 61  KGISNVAEGILANKTATRTRPVRRLVLYDNSFSTDGARALSMCLAHAQVSITLLDLSRNP 120

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           +   G   +A+ + +   L  L ++N  I   G   +AEA+ + +++ SL L       L
Sbjct: 121 IGCSGVSFVADAVFHGCPLVTLLVSNCKIGSEGMIRMAEAIEKTTSLLSLKLQRCPLDPL 180

Query: 318 GANALAKGLEGNKSLRELHLHGNSI---GDEGIRALMSG----LSSRKGKLAVLDIGNNS 370
           GA  LA+ LE N +L  L L G+ I   G   I A M G       R  +L  L + +  
Sbjct: 181 GAQHLARMLERNPALLGLDLSGSPILGAGMAEIAASMGGDADTRRERNTRLTSLSVRSCQ 240

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           + A GA H+A  + +   L  ++L  N IG  GA +++ AL+QN  +T + LG N I  +
Sbjct: 241 LHAGGAAHIARMLHSNNHLRRLDLGDNKIGTRGALELSAALQQNFALTELQLGKNEIEDE 300

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALS---------EVLKFHGNINTLKLGWC 481
           G   + R L  N  +  LDL+ N IG  GA+AL            L+  GN+ T  +G C
Sbjct: 301 GCLGLGRCLSVNLSLRKLDLSDNRIGDGGARALCLGLLANEAMSELRVEGNVLT-SVGVC 359



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 8/133 (6%)

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG +  K L E LK + +I+TL L   +IG  G++++ ++ ++N  I+ ++L AN LRD+
Sbjct: 2   IGREEMKHLVEGLKSNSSIHTLDLSMNRIGVEGSQYLRELFQHNLAIADVNLSANELRDK 61

Query: 515 GAKCLAQSFKVVNEALT------SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           G   +A+   + N+  T       + L  N    DGA A++  L A+  V++T L+L+ N
Sbjct: 62  GISNVAEGI-LANKTATRTRPVRRLVLYDNSFSTDGARALSMCL-AHAQVSITLLDLSRN 119

Query: 569 FLTKFGQSALTDA 581
            +   G S + DA
Sbjct: 120 PIGCSGVSFVADA 132



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 5/102 (4%)

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           QIG    + + + L+ N++I  LDL  N +  EG++ L + F+  N A+  ++L+ NE+R
Sbjct: 1   QIGREEMKHLVEGLKSNSSIHTLDLSMNRIGVEGSQYLRELFQ-HNLAIADVNLSANELR 59

Query: 542 DDGAFAIAQALKANEDVA----VTSLNLANNFLTKFGQSALT 579
           D G   +A+ + AN+       V  L L +N  +  G  AL+
Sbjct: 60  DKGISNVAEGILANKTATRTRPVRRLVLYDNSFSTDGARALS 101


>gi|32966213|gb|AAP92143.1| leucine-rich repeat protein N4C [synthetic construct]
          Length = 305

 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 114/214 (53%), Gaps = 2/214 (0%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERL 251
           E +    N +T AG+K    VL+SN +L+ L+LS N +GD GV+ L   L+D    +E L
Sbjct: 42  EYLDLNWNDLTEAGMKDLASVLRSNPSLRELDLSNNKLGDAGVRLLLQGLLDPGTRLENL 101

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLN 310
            L+  DL + G K +A +L++N  LR L L+NN +  +G   L + LL+  T +  L L+
Sbjct: 102 DLNESDLTEAGLKDLASVLRSNPSLRELTLSNNKLGDAGVRLLLQGLLDPGTRLEKLDLD 161

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                  G   LA  L  N SLREL L  N +GD G+R L+ GL     +L  LD+  N 
Sbjct: 162 QTDLTEAGMKDLASVLRSNPSLRELSLSSNKLGDAGVRLLLQGLLDPGTRLEKLDLNQND 221

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           ++      +A  +++  SL  ++L  N +GD G 
Sbjct: 222 LTEADLKDLASVLRSNPSLRELSLSNNKLGDAGV 255



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 116/222 (52%), Gaps = 9/222 (4%)

Query: 154 LNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKA 209
           + + A  LR+  S+   D+S    GD G+  L + L    T  E +    + +T AG+K 
Sbjct: 56  MKDLASVLRSNPSLRELDLSNNKLGDAGVRLLLQGLLDPGTRLENLDLNESDLTEAGLKD 115

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAE 268
              VL+SN +L+ L LS N +GD GV+ L   L+D    +E+L L   DL + G K +A 
Sbjct: 116 LASVLRSNPSLRELTLSNNKLGDAGVRLLLQGLLDPGTRLEKLDLDQTDLTEAGMKDLAS 175

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLE 327
           +L++N  LR L L++N +  +G   L + LL+  T +  L LN N         LA  L 
Sbjct: 176 VLRSNPSLRELSLSSNKLGDAGVRLLLQGLLDPGTRLEKLDLNQNDLTEADLKDLASVLR 235

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGL---SSRKGKLAVLDI 366
            N SLREL L  N +GD G+R L+ GL    +R  +L + DI
Sbjct: 236 SNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEQLVLYDI 277



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 2/220 (0%)

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-I 304
           A +E L L+  DL + G K +A +L++N  LR L+L+NN +  +G   L + LL+  T +
Sbjct: 39  ARLEYLDLNWNDLTEAGMKDLASVLRSNPSLRELDLSNNKLGDAGVRLLLQGLLDPGTRL 98

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            +L LN +     G   LA  L  N SLREL L  N +GD G+R L+ GL     +L  L
Sbjct: 99  ENLDLNESDLTEAGLKDLASVLRSNPSLRELTLSNNKLGDAGVRLLLQGLLDPGTRLEKL 158

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLG 423
           D+    ++  G   +A  +++  SL  ++L  N +GD G   +   L    T +  +DL 
Sbjct: 159 DLDQTDLTEAGMKDLASVLRSNPSLRELSLSSNKLGDAGVRLLLQGLLDPGTRLEKLDLN 218

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            N++       +A VL+ N  +  L L+ N +G  G + L
Sbjct: 219 QNDLTEADLKDLASVLRSNPSLRELSLSNNKLGDAGVRLL 258



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 4/242 (1%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L +    + D     L+  L     +L  LD+  N ++  G   +A  +++  SL  ++L
Sbjct: 15  LDIQSEELSDARWAELLPLLQQPYARLEYLDLNWNDLTEAGMKDLASVLRSNPSLRELDL 74

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             N +GD G   +   L    T +  +DL  +++   G   +A VL+ N  +  L L+ N
Sbjct: 75  SNNKLGDAGVRLLLQGLLDPGTRLENLDLNESDLTEAGLKDLASVLRSNPSLRELTLSNN 134

Query: 454 PIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            +G  G + L + L   G  +  L L    +  +G + +A +LR N ++  L L +N L 
Sbjct: 135 KLGDAGVRLLLQGLLDPGTRLEKLDLDQTDLTEAGMKDLASVLRSNPSLRELSLSSNKLG 194

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           D G + L Q        L  +DL  N++ +     +A  L++N   ++  L+L+NN L  
Sbjct: 195 DAGVRLLLQGLLDPGTRLEKLDLNQNDLTEADLKDLASVLRSNP--SLRELSLSNNKLGD 252

Query: 573 FG 574
            G
Sbjct: 253 AG 254


>gi|432106177|gb|ELK32070.1| Ribonuclease inhibitor [Myotis davidii]
          Length = 428

 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 174/396 (43%), Gaps = 30/396 (7%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           V     GIT    K     L+ N AL  L+LS N +GD G + +   L     +++L L 
Sbjct: 28  VRLVDCGITEGRCKDVSSALRDNPALTELSLSSNEMGDAGTQLVLQSLHPTCKIQKLSLQ 87

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNY 313
           S  L + G  A++ LL++   LR L+L+ N +  +G   L E LL+    I  LHL  + 
Sbjct: 88  SCHLSEAGCGALSSLLRSMPSLRELDLSYNQLKDAGLQLLCEGLLDPQCHIERLHLEYSN 147

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
             A    ALA  L   + L+ L +  N  G+ G R L  GL+     L  + +    ++A
Sbjct: 148 LTAASCEALASVLRAKRELKVLGVSNNDFGEAGTRTLCQGLADSTCPLESIRLEGCGLTA 207

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGA 432
                +   +    SL  + L  N +GD G  ++    L     + T+ L   +  + G 
Sbjct: 208 ANCQDLGGIVAAKASLSELQLGNNKLGDAGIAQLCPGLLSPGSRLQTLWLWECDFTASGC 267

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
             + +VL+    +  L +A N +G +GA+ L     F   +  +K   C + A+    V+
Sbjct: 268 KDLCQVLRAKESLKELSVAGNEVGDEGARLL-----FGLRVPRMK--SCGLTAACCPHVS 320

Query: 493 DMLRYNNTISILDLRANGLRDEGAKCLAQSFKV--VNEALTSID------------LAFN 538
            ML  N ++  L +  N L DEG +     F++  V+   +  D            +   
Sbjct: 321 AMLARNRSLQELQMSNNKLGDEGME-----FRLGSVSSLCSPGDGSGLGVLVRDGRVGDC 375

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           E+ D G  ++A  L AN   ++  L+L+NN L++ G
Sbjct: 376 EVTDQGCTSLAALLLANR--SLLELDLSNNCLSEVG 409



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 181/381 (47%), Gaps = 33/381 (8%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A + + +S    GD G   + +SL      +++S  +  ++ AG  A   +L+S  +L+ 
Sbjct: 52  ALTELSLSSNEMGDAGTQLVLQSLHPTCKIQKLSLQSCHLSEAGCGALSSLLRSMPSLRE 111

Query: 223 LNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+LS N + D G++ LC+ L+D    +ERL L   +L     +A+A +L+    L+VL +
Sbjct: 112 LDLSYNQLKDAGLQLLCEGLLDPQCHIERLHLEYSNLTAASCEALASVLRAKRELKVLGV 171

Query: 282 NNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           +NN    +G  +L + L +++  + S+ L G    A     L   +    SL EL L  N
Sbjct: 172 SNNDFGEAGTRTLCQGLADSTCPLESIRLEGCGLTAANCQDLGGIVAAKASLSELQLGNN 231

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +GD GI  L  GL S   +L  L +     +A G   + + ++  +SL  +++  N++G
Sbjct: 232 KLGDAGIAQLCPGLLSPGSRLQTLWLWECDFTASGCKDLCQVLRAKESLKELSVAGNEVG 291

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           DEGA ++   L+  R  +        + +     ++ +L  N  +  L ++ N +G +G 
Sbjct: 292 DEGA-RLLFGLRVPRMKSC------GLTAACCPHVSAMLARNRSLQELQMSNNKLGDEG- 343

Query: 461 KALSEVLKFH-GNINTL----------------KLGWCQIGASGAEFVADMLRYNNTISI 503
                 ++F  G++++L                ++G C++   G   +A +L  N ++  
Sbjct: 344 ------MEFRLGSVSSLCSPGDGSGLGVLVRDGRVGDCEVTDQGCTSLAALLLANRSLLE 397

Query: 504 LDLRANGLRDEGAKCLAQSFK 524
           LDL  N L + G   +A+S +
Sbjct: 398 LDLSNNCLSEVGVMKVAESAR 418



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 135/332 (40%), Gaps = 49/332 (14%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDG 212
           L+   + + +   +D+S     D GL  L E L   Q   E +    + +TAA  +A   
Sbjct: 99  LSSLLRSMPSLRELDLSYNQLKDAGLQLLCEGLLDPQCHIERLHLEYSNLTAASCEALAS 158

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLK 271
           VL++   LK L +S N  G+ G + LC  L D+   +E ++L    L     + +  ++ 
Sbjct: 159 VLRAKRELKVLGVSNNDFGEAGTRTLCQGLADSTCPLESIRLEGCGLTAANCQDLGGIVA 218

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNK 330
             + L  L+L NN +  +G   L   LL   S +++L L      A G   L + L   +
Sbjct: 219 AKASLSELQLGNNKLGDAGIAQLCPGLLSPGSRLQTLWLWECDFTASGCKDLCQVLRAKE 278

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           SL+EL + GN +GDEG R L          L V  + +  ++A    HV+  +   +SL 
Sbjct: 279 SLKELSVAGNEVGDEGARLLFG--------LRVPRMKSCGLTAACCPHVSAMLARNRSLQ 330

Query: 391 WINLYMNDIGDEGAE-------------------------KIADA-------------LK 412
            + +  N +GDEG E                         ++ D              L 
Sbjct: 331 ELQMSNNKLGDEGMEFRLGSVSSLCSPGDGSGLGVLVRDGRVGDCEVTDQGCTSLAALLL 390

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            NR++  +DL  N +   G   +A   +  S 
Sbjct: 391 ANRSLLELDLSNNCLSEVGVMKVAESARQPSC 422


>gi|320170130|gb|EFW47029.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 361

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 106/176 (60%), Gaps = 3/176 (1%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L+ N IGD G + IA+AL  N+T++ +DL  N I   GA AIA  L+ N  ++ L+L  N
Sbjct: 16  LWQNQIGDVGGQAIAEALNVNKTLSWLDLSQNQIGDAGARAIADALRVNKTLSWLNLQLN 75

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            IG  GA+A++E L+ +  +N L L   Q+G +GA  +A+ L+ N T+  L+L  N   D
Sbjct: 76  QIGDAGARAIAEALRVNTTLNKLFLEENQLGDAGAYAIAEALKLNKTLFRLNLYNNETGD 135

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
            GA+ +A++ KV N  L  ++L  ++I D GA AIA+ALK N    VT L++ +  
Sbjct: 136 VGAQAIAEALKV-NMTLKELNLEKSQIGDIGAQAIAKALKVN--TTVTELDIDDQI 188



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 6/181 (3%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           +EG  SL +     N IGD G +A+   L+  K  L+ LD+  N I   GA  +A+ ++ 
Sbjct: 10  VEGMDSLWQ-----NQIGDVGGQAIAEALNVNK-TLSWLDLSQNQIGDAGARAIADALRV 63

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            K+L W+NL +N IGD GA  IA+AL+ N T+  + L  N +   GA AIA  LK N  +
Sbjct: 64  NKTLSWLNLQLNQIGDAGARAIAEALRVNTTLNKLFLEENQLGDAGAYAIAEALKLNKTL 123

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
             L+L  N  G  GA+A++E LK +  +  L L   QIG  GA+ +A  L+ N T++ LD
Sbjct: 124 FRLNLYNNETGDVGAQAIAEALKVNMTLKELNLEKSQIGDIGAQAIAKALKVNTTVTELD 183

Query: 506 L 506
           +
Sbjct: 184 I 184



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 10/194 (5%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +GD    +L+ G+ S         +  N I   G   +AE +   K+L W++L  N IGD
Sbjct: 1   MGDSDECSLVEGMDS---------LWQNQIGDVGGQAIAEALNVNKTLSWLDLSQNQIGD 51

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GA  IADAL+ N+T++ ++L  N I   GA AIA  L+ N+ +  L L  N +G  GA 
Sbjct: 52  AGARAIADALRVNKTLSWLNLQLNQIGDAGARAIAEALRVNTTLNKLFLEENQLGDAGAY 111

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           A++E LK +  +  L L   + G  GA+ +A+ L+ N T+  L+L  + + D GA+ +A+
Sbjct: 112 AIAEALKLNKTLFRLNLYNNETGDVGAQAIAEALKVNMTLKELNLEKSQIGDIGAQAIAK 171

Query: 522 SFKVVNEALTSIDL 535
           + K VN  +T +D+
Sbjct: 172 ALK-VNTTVTELDI 184



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 102/197 (51%), Gaps = 2/197 (1%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S   N I   G +A    L  N  L  L+LS N IGD G + + D L  N  +  L L  
Sbjct: 15  SLWQNQIGDVGGQAIAEALNVNKTLSWLDLSQNQIGDAGARAIADALRVNKTLSWLNLQL 74

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + D GA+AIAE L+ N+ L  L L  N +  +G  ++AEAL  N T+  L+L  N  G
Sbjct: 75  NQIGDAGARAIAEALRVNTTLNKLFLEENQLGDAGAYAIAEALKLNKTLFRLNLYNNETG 134

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL--SSRKGKLAVLDIGNNSISA 373
            +GA A+A+ L+ N +L+EL+L  + IGD G +A+   L  ++   +L + D  N+  + 
Sbjct: 135 DVGAQAIAEALKVNMTLKELNLEKSQIGDIGAQAIAKALKVNTTVTELDIDDQINSLATL 194

Query: 374 KGAFHVAEYIKNCKSLL 390
           +     AE + N   LL
Sbjct: 195 RPRLATAEDLHNVFHLL 211



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 87/164 (53%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +AE+L  N+T   +  + N I  AG +A    L+ N  L  LNL  N IGD 
Sbjct: 21  IGDVGGQAIAEALNVNKTLSWLDLSQNQIGDAGARAIADALRVNKTLSWLNLQLNQIGDA 80

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  + +L L    L D GA AIAE LK N  L  L L NN     G  +
Sbjct: 81  GARAIAEALRVNTTLNKLFLEENQLGDAGAYAIAEALKLNKTLFRLNLYNNETGDVGAQA 140

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +AEAL  N T++ L+L  +  G +GA A+AK L+ N ++ EL +
Sbjct: 141 IAEALKVNMTLKELNLEKSQIGDIGAQAIAKALKVNTTVTELDI 184



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 91/154 (59%), Gaps = 6/154 (3%)

Query: 443 SVITSLD-LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           S++  +D L  N IG  G +A++E L  +  ++ L L   QIG +GA  +AD LR N T+
Sbjct: 8   SLVEGMDSLWQNQIGDVGGQAIAEALNVNKTLSWLDLSQNQIGDAGARAIADALRVNKTL 67

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           S L+L+ N + D GA+ +A++ +V N  L  + L  N++ D GA+AIA+ALK N+   + 
Sbjct: 68  SWLNLQLNQIGDAGARAIAEALRV-NTTLNKLFLEENQLGDAGAYAIAEALKLNK--TLF 124

Query: 562 SLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 595
            LNL NN     G  A+ +A  L   M+ KE+N+
Sbjct: 125 RLNLYNNETGDVGAQAIAEA--LKVNMTLKELNL 156



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 77/149 (51%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  S +D+S    GD G   +A++L  N+T   ++   N I  AG +A    L+ N  L 
Sbjct: 37  KTLSWLDLSQNQIGDAGARAIADALRVNKTLSWLNLQLNQIGDAGARAIAEALRVNTTLN 96

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N +GD G   + + L  N  + RL L + +  D GA+AIAE LK N  L+ L L
Sbjct: 97  KLFLEENQLGDAGAYAIAEALKLNKTLFRLNLYNNETGDVGAQAIAEALKVNMTLKELNL 156

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLN 310
             + I   G  ++A+AL  N+T+  L ++
Sbjct: 157 EKSQIGDIGAQAIAKALKVNTTVTELDID 185



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 62/124 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  S +++     GD G   +AE+L  N T  ++    N +  AG  A    L+ N  L 
Sbjct: 65  KTLSWLNLQLNQIGDAGARAIAEALRVNTTLNKLFLEENQLGDAGAYAIAEALKLNKTLF 124

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL  N  GD G + + + L  N  ++ L L    + D GA+AIA+ LK N+ +  L++
Sbjct: 125 RLNLYNNETGDVGAQAIAEALKVNMTLKELNLEKSQIGDIGAQAIAKALKVNTTVTELDI 184

Query: 282 NNNM 285
           ++ +
Sbjct: 185 DDQI 188


>gi|291410201|ref|XP_002721391.1| PREDICTED: nucleotide-binding oligomerization domain containing 2
            [Oryctolagus cuniculus]
          Length = 1056

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 133/270 (49%), Gaps = 10/270 (3%)

Query: 294  LAEALLENSTIRSL---HLNGNYGGALGAN--ALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            + E  L    +R L   HL   + G   A   ALA  L   +    L L  NS+GD G+ 
Sbjct: 765  MQEERLAQEAVRGLNVEHLKLTFCGVGPAECAALAFVLRHLRRPVALQLDHNSVGDIGVE 824

Query: 349  ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
             L+  L    G    L + +N+IS +G   + E+  +C+ L  + L+ N + D  A  +A
Sbjct: 825  QLLPCL----GACKALYLRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSVA 880

Query: 409  DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
              L   +    + LG N+I ++GA  +A  L+DNS +  L    N +G  GA+AL+E L 
Sbjct: 881  QLLACKQNFLALRLGNNHITAEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEALS 940

Query: 469  FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
             H ++  L L    IG+ GA+ +A ML  N  +  L L  N L+D G   LA+  K  N 
Sbjct: 941  DHQSLKWLSLVGNNIGSVGAQALASMLEKNVALEELCLEENHLQDAGVCSLAEGLK-RNS 999

Query: 529  ALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            +L  + L+ N I   GA A+ QAL +N+ +
Sbjct: 1000 SLKVLKLSNNCITFVGAEALLQALASNDTI 1029



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 142/279 (50%), Gaps = 4/279 (1%)

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            V    VE L+L+   +      A+A +L++      L+L++N +   G   L   L    
Sbjct: 775  VRGLNVEHLKLTFCGVGPAECAALAFVLRHLRRPVALQLDHNSVGDIGVEQLLPCL---G 831

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
              ++L+L  N     G   L +     + L++L L  N + D    ++   L+ ++  LA
Sbjct: 832  ACKALYLRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSVAQLLACKQNFLA 891

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +GNN I+A+GA  +AE +++  SL ++  + N +GD+GA+ +A+AL  ++++  + L
Sbjct: 892  -LRLGNNHITAEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEALSDHQSLKWLSL 950

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             GNNI S GA A+A +L+ N  +  L L  N +   G  +L+E LK + ++  LKL    
Sbjct: 951  VGNNIGSVGAQALASMLEKNVALEELCLEENHLQDAGVCSLAEGLKRNSSLKVLKLSNNC 1010

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            I   GAE +   L  N+TI  + LR N    E  + L+ 
Sbjct: 1011 ITFVGAEALLQALASNDTILEVWLRGNPFSPEEMEALSH 1049



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 4/180 (2%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITA G +     L+ N +L+ L   GN +GD+G + L + 
Sbjct: 879  VAQLLACKQNFLALRLGNNHITAEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEA 938

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  ++ L L   ++   GA+A+A +L+ N  L  L L  N +  +G  SLAE L  N
Sbjct: 939  LSDHQSLKWLSLVGNNIGSVGAQALASMLEKNVALEELCLEENHLQDAGVCSLAEGLKRN 998

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            S+++ L L+ N    +GA AL + L  N ++ E+ L GN    E     M  LS R  +L
Sbjct: 999  SSLKVLKLSNNCITFVGAEALLQALASNDTILEVWLRGNPFSPEE----MEALSHRDSRL 1054



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 79/149 (53%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +   +   EG   LAE L  N + + + F  N +   G +A    L  + +LK L
Sbjct: 889  FLALRLGNNHITAEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEALSDHQSLKWL 948

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +L GN IG  G + L  +L  N  +E L L    L+D G  ++AE LK NS L+VL+L+N
Sbjct: 949  SLVGNNIGSVGAQALASMLEKNVALEELCLEENHLQDAGVCSLAEGLKRNSSLKVLKLSN 1008

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N I + G  +L +AL  N TI  + L GN
Sbjct: 1009 NCITFVGAEALLQALASNDTILEVWLRGN 1037



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%)

Query: 161  LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
            L A  ++ +   N  D G+  L E   + +  ++++   N +T     +   +L      
Sbjct: 830  LGACKALYLRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSVAQLLACKQNF 889

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
              L L  N I  EG + L + L DN+ ++ L      + D+GA+A+AE L ++  L+ L 
Sbjct: 890  LALRLGNNHITAEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEALSDHQSLKWLS 949

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L  N I   G  +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N
Sbjct: 950  LVGNNIGSVGAQALASMLEKNVALEELCLEENHLQDAGVCSLAEGLKRNSSLKVLKLSNN 1009

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGN 368
             I   G  AL+  L+S    L V   GN
Sbjct: 1010 CITFVGAEALLQALASNDTILEVWLRGN 1037



 Score = 39.3 bits (90), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 1/129 (0%)

Query: 141  GFTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
            GF G K+  +  Q L E   + ++   + + G N G  G   LA  L  N   EE+    
Sbjct: 921  GFWGNKVGDKGAQALAEALSDHQSLKWLSLVGNNIGSVGAQALASMLEKNVALEELCLEE 980

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N +  AG+ +    L+ N +LK L LS N I   G + L   L  N  +  + L      
Sbjct: 981  NHLQDAGVCSLAEGLKRNSSLKVLKLSNNCITFVGAEALLQALASNDTILEVWLRGNPFS 1040

Query: 260  DEGAKAIAE 268
             E  +A++ 
Sbjct: 1041 PEEMEALSH 1049


>gi|326679422|ref|XP_001336197.4| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Danio
            rerio]
          Length = 1085

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 198/418 (47%), Gaps = 27/418 (6%)

Query: 150  SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
            S + L+EF  ELR +        +F +E L  L   +  ++ AE    +   I   G  +
Sbjct: 646  STKDLDEF--ELRQY--------DFTEECLLRLLPVVKASRKAE---LSNCSIREEGCAS 692

Query: 210  FDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIA 267
                L SN + L+ LNL+ N  G   VK L D+L + +  +E+LQL +  + +EG  A+A
Sbjct: 693  LVSALLSNPSHLRELNLNSNQPGYSTVKLLSDLLENPHCKLEKLQLYNCCIGEEGCAALA 752

Query: 268  -ELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKG 325
              L+ N S LR L LNNN    SG   L++ L +    +  L L        G  ALA  
Sbjct: 753  LALISNPSHLRELNLNNNEPGDSGVKLLSDLLKDPRCKLEKLQLECCSIIEEGCAALALA 812

Query: 326  LEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYI 383
            L  N S LREL+L+ N  GD G+  L   L + + KL  L++ N  I  +G   +A   I
Sbjct: 813  LVSNPSHLRELNLNNNEPGDLGVNLLSFLLKNPQCKLEKLELYNCCIGEEGCAALALALI 872

Query: 384  KNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDN 442
             N   L  +NL  N+ GD G + ++D LK  R  +  + L    I  +G +A+   LK N
Sbjct: 873  SNPSHLRELNLNNNEPGDSGVKLLSDLLKDPRCKLEKLQLEYCCIGEEGCAALVSGLKSN 932

Query: 443  -SVITSLDLAYNPIGADGAKALSEVLK---FHGNINTLKLGWCQIGASG-AEFVADMLRY 497
             S +  L+L  N  G  GAK LS++LK   F   +  L+L  C I  +G A+ V+ +   
Sbjct: 933  PSHLRELNLNRNEPGNLGAKMLSDLLKDPLFE--LEKLELDDCSIENNGFADLVSGLKSN 990

Query: 498  NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             + I  L+L +N     G   L    +     L  + L    I ++G  A+A AL +N
Sbjct: 991  PSNIRELNLNSNKFIFSGLNLLCDLLRDQQCKLRKLQLECCNIDEEGCAALALALISN 1048



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 168/354 (47%), Gaps = 11/354 (3%)

Query: 236  KCLCDILVDNAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            +CL  +L       + +LS+  +R+EG A  ++ LL N S LR L LN+N   YS    L
Sbjct: 663  ECLLRLLPVVKASRKAELSNCSIREEGCASLVSALLSNPSHLRELNLNSNQPGYSTVKLL 722

Query: 295  AEALLEN--STIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRALM 351
            ++ LLEN    +  L L     G  G  ALA  L  N S LREL+L+ N  GD G++ L 
Sbjct: 723  SD-LLENPHCKLEKLQLYNCCIGEEGCAALALALISNPSHLRELNLNNNEPGDSGVKLLS 781

Query: 352  SGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              L   + KL  L +   SI  +G   +A   + N   L  +NL  N+ GD G   ++  
Sbjct: 782  DLLKDPRCKLEKLQLECCSIIEEGCAALALALVSNPSHLRELNLNNNEPGDLGVNLLSFL 841

Query: 411  LKQNRT-ITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYNPIGADGAKALSEVLK 468
            LK  +  +  ++L    I  +G +A+A  L  N S +  L+L  N  G  G K LS++LK
Sbjct: 842  LKNPQCKLEKLELYNCCIGEEGCAALALALISNPSHLRELNLNNNEPGDSGVKLLSDLLK 901

Query: 469  -FHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDEGAKCLAQSFKVV 526
                 +  L+L +C IG  G   +   L+ N + +  L+L  N   + GAK L+   K  
Sbjct: 902  DPRCKLEKLQLEYCCIGEEGCAALVSGLKSNPSHLRELNLNRNEPGNLGAKMLSDLLKDP 961

Query: 527  NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
               L  ++L    I ++G   +   LK+N    +  LNL +N     G + L D
Sbjct: 962  LFELEKLELDDCSIENNGFADLVSGLKSNPS-NIRELNLNSNKFIFSGLNLLCD 1014



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 144/342 (42%), Gaps = 66/342 (19%)

Query: 193  EEVSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVD-NAGVER 250
            E++      I   G  A    L SN + L+ LNL+ N  GD GVK L D+L D    +E+
Sbjct: 734  EKLQLYNCCIGEEGCAALALALISNPSHLRELNLNNNEPGDSGVKLLSDLLKDPRCKLEK 793

Query: 251  LQLSSVDLRDEGAKAIA-ELLKNNSILRVLELNNN------------------------- 284
            LQL    + +EG  A+A  L+ N S LR L LNNN                         
Sbjct: 794  LQLECCSIIEEGCAALALALVSNPSHLRELNLNNNEPGDLGVNLLSFLLKNPQCKLEKLE 853

Query: 285  ----MIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLH 338
                 I   G  +LA AL+ N S +R L+LN N  G  G   L+  L+  +  L +L L 
Sbjct: 854  LYNCCIGEEGCAALALALISNPSHLRELNLNNNEPGDSGVKLLSDLLKDPRCKLEKLQLE 913

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-------------- 384
               IG+EG  AL+SGL S    L  L++  N     GA  +++ +K              
Sbjct: 914  YCCIGEEGCAALVSGLKSNPSHLRELNLNRNEPGNLGAKMLSDLLKDPLFELEKLELDDC 973

Query: 385  ----------------NCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNI 427
                            N  ++  +NL  N     G   + D L+ Q   +  + L   NI
Sbjct: 974  SIENNGFADLVSGLKSNPSNIRELNLNSNKFIFSGLNLLCDLLRDQQCKLRKLQLECCNI 1033

Query: 428  HSKGASAIARVLKDN-SVITSLDLAYNPIGADGAKALSEVLK 468
              +G +A+A  L  N S +  L+L YN  G  G K LS +LK
Sbjct: 1034 DEEGCAALALALISNPSHLRELNLNYNNPGGLGVKLLSVLLK 1075



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 153/354 (43%), Gaps = 39/354 (11%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN-STIRS 306
           ++  +L   D  +E    +  ++K +   R  EL+N  I   G  SL  ALL N S +R 
Sbjct: 650 LDEFELRQYDFTEECLLRLLPVVKAS---RKAELSNCSIREEGCASLVSALLSNPSHLRE 706

Query: 307 LHLNGNYGGALGANALAKGLEG-NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           L+LN N  G      L+  LE  +  L +L L+   IG+EG  AL   L S    L  L+
Sbjct: 707 LNLNSNQPGYSTVKLLSDLLENPHCKLEKLQLYNCCIGEEGCAALALALISNPSHLRELN 766

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGG 424
           + N                            N+ GD G + ++D LK  R  +  + L  
Sbjct: 767 LNN----------------------------NEPGDSGVKLLSDLLKDPRCKLEKLQLEC 798

Query: 425 NNIHSKGASAIARVLKDN-SVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQ 482
            +I  +G +A+A  L  N S +  L+L  N  G  G   LS +LK     +  L+L  C 
Sbjct: 799 CSIIEEGCAALALALVSNPSHLRELNLNNNEPGDLGVNLLSFLLKNPQCKLEKLELYNCC 858

Query: 483 IGASGAEFVADMLRYNNT-ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           IG  G   +A  L  N + +  L+L  N   D G K L+   K     L  + L +  I 
Sbjct: 859 IGEEGCAALALALISNPSHLRELNLNNNEPGDSGVKLLSDLLKDPRCKLEKLQLEYCCIG 918

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD-AKDLVYEMSEKEVN 594
           ++G  A+   LK+N    +  LNL  N     G   L+D  KD ++E+ + E++
Sbjct: 919 EEGCAALVSGLKSNPS-HLRELNLNRNEPGNLGAKMLSDLLKDPLFELEKLELD 971



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 107/250 (42%), Gaps = 37/250 (14%)

Query: 175  GDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGD 232
            GD G+  L+  L   Q   E++      I   G  A    L SN + L+ LNL+ N  GD
Sbjct: 831  GDLGVNLLSFLLKNPQCKLEKLELYNCCIGEEGCAALALALISNPSHLRELNLNNNEPGD 890

Query: 233  EGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNN------ 284
             GVK L D+L D    +E+LQL    + +EG  A+   LK+N S LR L LN N      
Sbjct: 891  SGVKLLSDLLKDPRCKLEKLQLEYCCIGEEGCAALVSGLKSNPSHLRELNLNRNEPGNLG 950

Query: 285  -----------------------MIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGAN 320
                                    I+ +GF  L   L  N S IR L+LN N     G N
Sbjct: 951  AKMLSDLLKDPLFELEKLELDDCSIENNGFADLVSGLKSNPSNIRELNLNSNKFIFSGLN 1010

Query: 321  ALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             L   L   +  LR+L L   +I +EG  AL   L S    L  L++  N+    G   +
Sbjct: 1011 LLCDLLRDQQCKLRKLQLECCNIDEEGCAALALALISNPSHLRELNLNYNNPGGLGVKLL 1070

Query: 380  AEYIKN--CK 387
            +  +KN  CK
Sbjct: 1071 SVLLKNPHCK 1080



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 96/197 (48%), Gaps = 6/197 (3%)

Query: 175  GDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGD 232
            GD G+  L++ L   +   E++      I   G  A    L+SN + L+ LNL+ N  G+
Sbjct: 889  GDSGVKLLSDLLKDPRCKLEKLQLEYCCIGEEGCAALVSGLKSNPSHLRELNLNRNEPGN 948

Query: 233  EGVKCLCDILVDNA-GVERLQLSSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSG 290
             G K L D+L D    +E+L+L    + + G A  ++ L  N S +R L LN+N   +SG
Sbjct: 949  LGAKMLSDLLKDPLFELEKLELDDCSIENNGFADLVSGLKSNPSNIRELNLNSNKFIFSG 1008

Query: 291  FTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIR 348
               L + L +    +R L L        G  ALA  L  N S LREL+L+ N+ G  G++
Sbjct: 1009 LNLLCDLLRDQQCKLRKLQLECCNIDEEGCAALALALISNPSHLRELNLNYNNPGGLGVK 1068

Query: 349  ALMSGLSSRKGKLAVLD 365
             L   L +   KL  L+
Sbjct: 1069 LLSVLLKNPHCKLEKLE 1085


>gi|39793913|gb|AAH63566.1| NLRC5 protein [Homo sapiens]
          Length = 837

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 164/346 (47%), Gaps = 14/346 (4%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 468 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 527

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L++ +++ S    L   L + + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 528 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 587

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 588 QIGDAGVQHLATILPGLP-ELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALG 646

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 647 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 702

Query: 461 KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE A 
Sbjct: 703 -----VLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAA 757

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
            LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 758 ELAQVLPKMGR-LKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRL 802



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 140/341 (41%), Gaps = 59/341 (17%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
           EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 480 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 539

Query: 228 -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                              N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 540 LLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 599

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEAL-----LEN---------------------S 302
           +L     LR ++L+ N I  +G   LAE+L     LE                       
Sbjct: 600 ILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 659

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    +R  M     R+    
Sbjct: 660 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMELPLLRQ---- 715

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            +D+ +  I  + A  +     +C +L  I L  N +GDE A ++A  L +   +  +DL
Sbjct: 716 -IDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPKMGRLKRVDL 774

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 775 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHL 815



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 5/218 (2%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL   
Sbjct: 472 LTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHL 531

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            ++S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG 
Sbjct: 532 LLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGD 591

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
           +G + +A +L     +  +DL  N +   G   LA+S  V+   L  + L  N + D  A
Sbjct: 592 AGVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESL-VLCRRLEELMLGCNALGDPTA 650

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
             +AQ L  +  V    L+L  + L   G  +L  A D
Sbjct: 651 LGLAQELPQHLRV----LHLPFSHLGPGGALSLAQALD 684



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 39/265 (14%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           ++L LS  P+    +  LC  L D  G   LQLS   L D+  + + + L     L    
Sbjct: 81  RSLCLSECPLEPPSLTRLCATLKDCPGPLELQLSCEFLSDQSLETLLDCLPQLPQL---- 136

Query: 281 LNNNMIDYSGFTSLAEALLENST----------IRSLH---------------LNGNYGG 315
            +   +  +G +  +  LL N+           +RSLH                 G + G
Sbjct: 137 -SLLQLSQTGLSPKSPFLLANTLSLCPRVKKVDLRSLHHATLHFRSNEEEEGVCCGRFTG 195

Query: 316 AL----GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
                    +L   L   K L ++ L  N +GD G+R L+  L        +LD+ +NSI
Sbjct: 196 CSLSQEHVESLCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPIS-GLLDLSHNSI 254

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           S + A ++ E + +C     +     ++G E + +I  + ++++   T+ L   +   + 
Sbjct: 255 SQESALYLLETLPSCPR---VREASVNLGSEQSFRIHFS-REDQAGKTLRLSECSFRPEH 310

Query: 432 ASAIARVLKDNSVITSLDLAYNPIG 456
            S +A  L  +  +T L L    +G
Sbjct: 311 VSRLATGLSKSLQLTELTLTQCCLG 335


>gi|405975327|gb|EKC39901.1| hypothetical protein CGI_10016633 [Crassostrea gigas]
          Length = 592

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 130/253 (51%), Gaps = 2/253 (0%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GA    A++  LE N ++  L+L GN I   G R L   L        V+ +  N I  +
Sbjct: 161 GAESVKAISFPLETNTNIEILNLEGNGIDSLGARCLCRVLRENLFLTEVV-LSENKIGTE 219

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  + +++K+ ++LL +++  N+IGD   +  ++ LK N+T+  + L  N +    A  
Sbjct: 220 GAISICQFLKSNRNLLKVDMTANEIGDPAGQSFSEVLKGNQTLKELILANNRLEETSARF 279

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +   +++N  +  LDL++N     GA A++E L+ +  +   +     +  +G+E +   
Sbjct: 280 LREGIQENDRLEMLDLSWNHFKTTGAVAIAEGLQENVGLKKFRFQMAGLAKAGSEAMMKA 339

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L++N T+  LD+  N +  EGA  LA   K  N+ L  + L  N    +GA  I +A++A
Sbjct: 340 LKHNRTLRELDISFNRIPVEGAAFLANGLK-ENDVLQYLKLGNNPFESEGAMVILEAVEA 398

Query: 555 NEDVAVTSLNLAN 567
           NE+ A+  L+ +N
Sbjct: 399 NENSAIKYLDFSN 411



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 29/284 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N   +E+    +G+ A  +KA    L++N  ++ LNL GN I   G +CLC +L +N  +
Sbjct: 147 NLENKELKLRFHGLGAESVKAISFPLETNTNIEILNLEGNGIDSLGARCLCRVLRENLFL 206

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
             + LS   +  EGA +I + LK+N  L  +++  N I                      
Sbjct: 207 TEVVLSENKIGTEGAISICQFLKSNRNLLKVDMTANEI---------------------- 244

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
                 G     + ++ L+GN++L+EL L  N + +   R L  G+     +L +LD+  
Sbjct: 245 ------GDPAGQSFSEVLKGNQTLKELILANNRLEETSARFLREGIQE-NDRLEMLDLSW 297

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N     GA  +AE ++    L      M  +   G+E +  ALK NRT+  +D+  N I 
Sbjct: 298 NHFKTTGAVAIAEGLQENVGLKKFRFQMAGLAKAGSEAMMKALKHNRTLRELDISFNRIP 357

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            +GA+ +A  LK+N V+  L L  NP  ++GA  + E ++ + N
Sbjct: 358 VEGAAFLANGLKENDVLQYLKLGNNPFESEGAMVILEAVEANEN 401



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 129/267 (48%), Gaps = 3/267 (1%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G E +  ++  L  N   E ++   NGI + G +    VL+ N+ L  + LS N IG E
Sbjct: 160 LGAESVKAISFPLETNTNIEILNLEGNGIDSLGARCLCRVLRENLFLTEVVLSENKIGTE 219

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   +C  L  N  + ++ +++ ++ D   ++ +E+LK N  L+ L L NN ++ +    
Sbjct: 220 GAISICQFLKSNRNLLKVDMTANEIGDPAGQSFSEVLKGNQTLKELILANNRLEETSARF 279

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           L E + EN  +  L L+ N+    GA A+A+GL+ N  L++       +   G  A+M  
Sbjct: 280 LREGIQENDRLEMLDLSWNHFKTTGAVAIAEGLQENVGLKKFRFQMAGLAKAGSEAMMKA 339

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK- 412
           L   +  L  LDI  N I  +GA  +A  +K    L ++ L  N    EGA  I +A++ 
Sbjct: 340 LKHNR-TLRELDISFNRIPVEGAAFLANGLKENDVLQYLKLGNNPFESEGAMVILEAVEA 398

Query: 413 -QNRTITTIDLGGNNIHSKGASAIARV 438
            +N  I  +D     + ++ A+   R+
Sbjct: 399 NENSAIKYLDFSNMLVKTEFATIEERL 425



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 84/176 (47%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +F K  R    VDM+    GD      +E L  NQT +E+  A N +     +     +Q
Sbjct: 226 QFLKSNRNLLKVDMTANEIGDPAGQSFSEVLKGNQTLKELILANNRLEETSARFLREGIQ 285

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N  L+ L+LS N     G   + + L +N G+++ +     L   G++A+ + LK+N  
Sbjct: 286 ENDRLEMLDLSWNHFKTTGAVAIAEGLQENVGLKKFRFQMAGLAKAGSEAMMKALKHNRT 345

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           LR L+++ N I   G   LA  L EN  ++ L L  N   + GA  + + +E N++
Sbjct: 346 LRELDISFNRIPVEGAAFLANGLKENDVLQYLKLGNNPFESEGAMVILEAVEANEN 401



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 2/227 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + V +S    G EG   + + L  N+   +V   AN I     ++F  VL+ N  LK L
Sbjct: 206 LTEVVLSENKIGTEGAISICQFLKSNRNLLKVDMTANEIGDPAGQSFSEVLKGNQTLKEL 265

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L+ N + +   + L + + +N  +E L LS    +  GA AIAE L+ N  L+      
Sbjct: 266 ILANNRLEETSARFLREGIQENDRLEMLDLSWNHFKTTGAVAIAEGLQENVGLKKFRFQM 325

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             +  +G  ++ +AL  N T+R L ++ N     GA  LA GL+ N  L+ L L  N   
Sbjct: 326 AGLAKAGSEAMMKALKHNRTLRELDISFNRIPVEGAAFLANGLKENDVLQYLKLGNNPFE 385

Query: 344 DEGIRALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            EG   ++  + + +   +  LD  N  +  + A  + E +K  + L
Sbjct: 386 SEGAMVILEAVEANENSAIKYLDFSNMLVKTEFA-TIEERLKEQRKL 431


>gi|114612656|ref|XP_001165528.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 isoform 2 [Pan troglodytes]
 gi|410210458|gb|JAA02448.1| nucleotide-binding oligomerization domain containing 1 [Pan
           troglodytes]
 gi|410265490|gb|JAA20711.1| nucleotide-binding oligomerization domain containing 1 [Pan
           troglodytes]
 gi|410292634|gb|JAA24917.1| nucleotide-binding oligomerization domain containing 1 [Pan
           troglodytes]
 gi|410332277|gb|JAA35085.1| nucleotide-binding oligomerization domain containing 1 [Pan
           troglodytes]
          Length = 953

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 122/225 (54%), Gaps = 1/225 (0%)

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           S +  L L+ N     G   L++ L   K +  L L+ N I D G R +   L   KG L
Sbjct: 728 SRLTVLRLSVNQITDSGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-L 786

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +G N I+++G  ++A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ 
Sbjct: 787 THLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLS 846

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I ++G  ++AR L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   
Sbjct: 847 LASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQN 906

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
           QI A G   +AD L+ N  I+ + L  N ++ E AK      +++
Sbjct: 907 QITAKGTAQLADALQSNTGITEICLNGNLIKPEEAKVYEDEKRII 951



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVLRLSVNQITDSGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++ TL L    I   G + +A  L+ N ++ IL L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL++N  +    LN
Sbjct: 895 -NQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLN 932



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L LS N I D GVK L + L     V  L L +  + D GA+ + ++L     L  L
Sbjct: 730 LTVLRLSVNQITDSGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G                    G Y        LA  ++ +KS+ E+ + G
Sbjct: 790 KLGKNKITSEG--------------------GKY--------LALAVKNSKSISEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GDEG +A    L +    L  L + +N IS +G   +A  ++   SL  + L  N++
Sbjct: 822 NQVGDEGAKAFAEALRNHPS-LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I +KG + +A  L+ N+ IT + L  N I  + 
Sbjct: 881 NDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVYED 946



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 81/153 (52%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +  + + +       EG  +LA ++  +++  EV    N +   G KAF   L+++ +
Sbjct: 782 ECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +E L L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 902 WLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 91/200 (45%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L+E L   +    +    N IT  G +    +L     L  L L  N
Sbjct: 735 LSVNQITDSGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKN 794

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG K L   + ++  +  + +    + DEGAKA AE L+N+  L  L L +N I  
Sbjct: 795 KITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGIST 854

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+ L L  N I  +G  
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTA 914

Query: 349 ALMSGLSSRKGKLAVLDIGN 368
            L   L S  G   +   GN
Sbjct: 915 QLADALQSNTGITEICLNGN 934



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T L L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L     ++
Sbjct: 728 SRLTVLRLSVNQITDSGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLT 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG K LA + K  +++++ + +  N++ D+GA A A+AL+ +   ++T+
Sbjct: 788 HLKLGKNKITSEGGKYLALAVKN-SKSISEVGMWGNQVGDEGAKAFAEALRNHP--SLTT 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA+N ++  G  +L  A
Sbjct: 845 LSLASNGISTEGGKSLARA 863


>gi|224108087|ref|XP_002314715.1| predicted protein [Populus trichocarpa]
 gi|222863755|gb|EEF00886.1| predicted protein [Populus trichocarpa]
          Length = 540

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 135/270 (50%), Gaps = 1/270 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L+S   L+ L L  N I +E  + +C+++     +  LQ  +    
Sbjct: 225 NALGEKGVRAFGALLRSQSCLEELYLMNNGISEEAAEAVCELIPLTEKLRVLQFHNNMTG 284

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D+GA AI++++K + +L     ++  +   G  +L+EAL   + ++ L L  N  G    
Sbjct: 285 DKGALAISKVVKRSPLLEDFRCSSTRVGSEGGVALSEALDTCTHLKKLDLRDNMFGVEAG 344

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL+K L     L E++L   ++ DEG  A+   L      L VLDI  N I+A+ A  V
Sbjct: 345 VALSKALSKYAGLTEVYLSYLNLEDEGAMAIARALKESAPSLEVLDIAGNDITAEAAPIV 404

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARV 438
           A  I   + L  +NL  N++ DEGA +I+  L++    +  +D+  N+I   GA  +ARV
Sbjct: 405 AACIAEKQHLTKLNLAENELKDEGAIQISKVLEEGHLQLKEVDMSINSIRRAGARVLARV 464

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +        L++  N I  +G   + E+ +
Sbjct: 465 VVQKPEFKFLNIDGNFISDEGIDEVKEMFE 494



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 120/235 (51%), Gaps = 4/235 (1%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG+  L+ L+L  N++G++G+RA  + L S+   L  L + NN IS + A  V
Sbjct: 206 NIFSTALEGS-ILKSLNLSNNALGEKGVRAFGALLRSQSC-LEELYLMNNGISEEAAEAV 263

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E I   + L  +  + N  GD+GA  I+  +K++  +         + S+G  A++  L
Sbjct: 264 CELIPLTEKLRVLQFHNNMTGDKGALAISKVVKRSPLLEDFRCSSTRVGSEGGVALSEAL 323

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              + +  LDL  N  G +   ALS+ L  +  +  + L +  +   GA  +A  L+ + 
Sbjct: 324 DTCTHLKKLDLRDNMFGVEAGVALSKALSKYAGLTEVYLSYLNLEDEGAMAIARALKESA 383

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            ++ +LD+  N +  E A  +A       + LT ++LA NE++D+GA  I++ L+
Sbjct: 384 PSLEVLDIAGNDITAEAAPIVAACI-AEKQHLTKLNLAENELKDEGAIQISKVLE 437



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 133/307 (43%), Gaps = 32/307 (10%)

Query: 139 LSGF-TGKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+ + +N F+  L      S+++S    G++G+      L      EE+
Sbjct: 189 LSDFIAGRPEAEALEVMNIFSTALEGSILKSLNLSNNALGEKGVRAFGALLRSQSCLEEL 248

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               NGI+    +A   ++     L+ L    N  GD+G   +  ++  +  +E  + SS
Sbjct: 249 YLMNNGISEEAAEAVCELIPLTEKLRVLQFHNNMTGDKGALAISKVVKRSPLLEDFRCSS 308

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMI-------------DYSGFT---------- 292
             +  EG  A++E L   + L+ L+L +NM               Y+G T          
Sbjct: 309 TRVGSEGGVALSEALDTCTHLKKLDLRDNMFGVEAGVALSKALSKYAGLTEVYLSYLNLE 368

Query: 293 -----SLAEALLENS-TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                ++A AL E++ ++  L + GN   A  A  +A  +   + L +L+L  N + DEG
Sbjct: 369 DEGAMAIARALKESAPSLEVLDIAGNDITAEAAPIVAACIAEKQHLTKLNLAENELKDEG 428

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
              +   L     +L  +D+  NSI   GA  +A  +       ++N+  N I DEG ++
Sbjct: 429 AIQISKVLEEGHLQLKEVDMSINSIRRAGARVLARVVVQKPEFKFLNIDGNFISDEGIDE 488

Query: 407 IADALKQ 413
           + +  ++
Sbjct: 489 VKEMFEK 495


>gi|449458432|ref|XP_004146951.1| PREDICTED: RAN GTPase-activating protein 1-like [Cucumis sativus]
 gi|449517201|ref|XP_004165634.1| PREDICTED: RAN GTPase-activating protein 1-like [Cucumis sativus]
          Length = 539

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 175/380 (46%), Gaps = 39/380 (10%)

Query: 164 FSSVDMSGRNFGDEG-------LFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F+ +  S R+FG +        LF + + L     ++ ++  + G     +  F   L+ 
Sbjct: 154 FTKICFSNRSFGLDAARVAEPILFSIKDRLTEVDLSDFIAGRSEGDALEVMNIFSAALE- 212

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              L+ L+LS N +G++GV+    +L     +E L L +  + +E A+A+ EL+ +   L
Sbjct: 213 GCDLRYLDLSNNAMGEKGVRAFGLLLRSQKNLEELYLMNDGISEEAARAVRELIPSTDKL 272

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           R+L+ +NNM    G  S++E +  +  +     +    G+ G  ALA+ +     L++L 
Sbjct: 273 RILQFHNNMTGDEGAISISEIVKSSPALEDFRCSSTRVGSEGGVALAEAIGTCTRLKKLD 332

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N  G E   AL   +SS  G                             L  I L  
Sbjct: 333 LRDNMFGVEAGVALSKSISSFPG-----------------------------LTEIYLSY 363

Query: 397 NDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            ++ DEGAE +A+ALK +  ++  +++ GN+I +KGA +IA  +     ++ L LA N +
Sbjct: 364 LNLEDEGAEALANALKDSAPSLEVLEVAGNDITAKGAVSIAACVATKQFLSKLYLAENEL 423

Query: 456 GADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             DG   + + L+  HG ++ +      I  +GA FVA +L       +L++ AN + +E
Sbjct: 424 KDDGVILIGKALQDGHGQLSEVDFSTNSIRRAGARFVAQILVQKPGFKLLNINANYISEE 483

Query: 515 GAKCLAQSFKVVNEALTSID 534
           G   + + FK     L S+D
Sbjct: 484 GIDEVKEIFKNSPNMLGSLD 503



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 133/279 (47%), Gaps = 4/279 (1%)

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           A LE   +R L L+ N  G  G  A    L   K+L EL+L  + I +E  RA+   + S
Sbjct: 209 AALEGCDLRYLDLSNNAMGEKGVRAFGLLLRSQKNLEELYLMNDGISEEAARAVRELIPS 268

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
              KL +L   NN    +GA  ++E +K+  +L         +G EG   +A+A+     
Sbjct: 269 -TDKLRILQFHNNMTGDEGAISISEIVKSSPALEDFRCSSTRVGSEGGVALAEAIGTCTR 327

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINT 475
           +  +DL  N    +   A+++ +     +T + L+Y  +  +GA+AL+  LK    ++  
Sbjct: 328 LKKLDLRDNMFGVEAGVALSKSISSFPGLTEIYLSYLNLEDEGAEALANALKDSAPSLEV 387

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
           L++    I A GA  +A  +     +S L L  N L+D+G   + ++ +  +  L+ +D 
Sbjct: 388 LEVAGNDITAKGAVSIAACVATKQFLSKLYLAENELKDDGVILIGKALQDGHGQLSEVDF 447

Query: 536 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           + N IR  GA  +AQ L       +  LN+  N++++ G
Sbjct: 448 STNSIRRAGARFVAQILVQKPGFKL--LNINANYISEEG 484



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 110/263 (41%), Gaps = 36/263 (13%)

Query: 153 TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           +++E  K   A      S    G EG   LAE++G                         
Sbjct: 289 SISEIVKSSPALEDFRCSSTRVGSEGGVALAEAIG------------------------- 323

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
              +   LK L+L  N  G E    L   +    G+  + LS ++L DEGA+A+A  LK+
Sbjct: 324 ---TCTRLKKLDLRDNMFGVEAGVALSKSISSFPGLTEIYLSYLNLEDEGAEALANALKD 380

Query: 273 NSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNK 330
           ++  L VLE+  N I   G  S+A  +     +  L+L  N     G   + K L+ G+ 
Sbjct: 381 SAPSLEVLEVAGNDITAKGAVSIAACVATKQFLSKLYLAENELKDDGVILIGKALQDGHG 440

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            L E+    NSI   G R +   L  + G   +L+I  N IS +G   V E  KN  ++L
Sbjct: 441 QLSEVDFSTNSIRRAGARFVAQILVQKPG-FKLLNINANYISEEGIDEVKEIFKNSPNML 499

Query: 391 WINLYMNDIG----DEGAEKIAD 409
             +L  ND      DE AE+  D
Sbjct: 500 G-SLDENDPDGEDYDEDAEENGD 521


>gi|357440739|ref|XP_003590647.1| Ran GTPase activating protein [Medicago truncatula]
 gi|355479695|gb|AES60898.1| Ran GTPase activating protein [Medicago truncatula]
          Length = 533

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 177/380 (46%), Gaps = 38/380 (10%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVS---FAANGITAAGIKA---FDGVLQ 215
           +F+++  S R+FG +    +   L       +EV    F A    A  I+    F   L+
Sbjct: 153 SFTNICFSNRSFGLDAAHVVEPMLISIKDQLKEVDLSDFIAGRPEAEAIEVMNIFSSALE 212

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
             + L+ LNLS N +G++GV+    +L     +E L L +  + +E AKA+AEL+ +   
Sbjct: 213 GAV-LRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPSTEK 271

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+VL  +NNM    G  ++A+ +  +  +     +    GA G  ALA+ L     L++L
Sbjct: 272 LKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKL 331

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N  G E   AL                             ++ I     L  I L 
Sbjct: 332 DLRDNMFGVEAGVAL-----------------------------SKVIPVFADLTEIYLS 362

Query: 396 MNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             ++ D+GAE +A+ALK++  ++  +D+ GN+I +K A ++A  +     +T L+L+ N 
Sbjct: 363 YLNLEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENE 422

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +  +GA  +S+ L+  G ++ + L    I  SGA+ +A+ +       +L++ AN + DE
Sbjct: 423 LKDEGAGLISKALEGLGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNVNANFISDE 482

Query: 515 GAKCLAQSFKVVNEALTSID 534
           G   L   FK   + L  +D
Sbjct: 483 GIDELKDIFKNSPDILGPLD 502



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 32/271 (11%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG   LR L+L  N++G++G+RA  + L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSSALEG-AVLRHLNLSNNAMGEKGVRAFRALLKSQ-NDLEELYLMNDGISEEAAKAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE I + + L  ++ + N  GDEGA  IAD                            V+
Sbjct: 263 AELIPSTEKLKVLHFHNNMTGDEGAFAIAD----------------------------VM 294

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           K +  +     +   +GA+G  AL+E L    ++  L L     G      ++ ++    
Sbjct: 295 KRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFA 354

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
            ++ + L    L D+GA+ LA + K    +L  +D+A N+I    A ++A+ + + +   
Sbjct: 355 DLTEIYLSYLNLEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQ--F 412

Query: 560 VTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
           +T LNL+ N L   G   ++ A + + ++SE
Sbjct: 413 LTKLNLSENELKDEGAGLISKALEGLGQLSE 443


>gi|410340599|gb|JAA39246.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410340601|gb|JAA39247.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410340603|gb|JAA39248.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410340605|gb|JAA39249.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410340607|gb|JAA39250.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
 gi|410340609|gb|JAA39251.1| ribonuclease/angiogenin inhibitor 1 [Pan troglodytes]
          Length = 461

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 178/415 (42%), Gaps = 9/415 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+D+      D      AE L   Q  + V     G+T A  K     L+ N AL  L
Sbjct: 5   IQSLDIQCEELSDA---RWAELLLLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61

Query: 224 NLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NL  N +GD GV C+   L   +  +++L L +  L   G   ++  L+    L+ L L+
Sbjct: 62  NLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS 121

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N++  +G   L E LL+    +  L L      A     LA  L      +EL +  N 
Sbjct: 122 DNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCKPLASVLRAKPDFKELTVSNND 181

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G+R L  GL     +L  L + +  +++     +   + +  SL  + L  N +GD
Sbjct: 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241

Query: 402 EG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G AE     L  +  + T+ +    I +KG   + RVL+    +  L LA N +G +GA
Sbjct: 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301

Query: 461 KALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           + L E L   G  + +L +  C   A+     + +L  N  +  L +  N L D G + L
Sbjct: 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDAGVQEL 361

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            Q        L  + LA  ++ D    ++A  L AN   ++  L+L+NN L   G
Sbjct: 362 CQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANH--SLRELDLSNNCLGDAG 414



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 181/389 (46%), Gaps = 8/389 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L++   L+
Sbjct: 57  ALAELNLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQ 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL   +L     K +A +L+     + L 
Sbjct: 117 ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCKPLASVLRAKPDFKELT 176

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD G+  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDA 356

Query: 459 GAKALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L + L   G++   L L  C +  S    +A  L  N+++  LDL  N L D G  
Sbjct: 357 GVQELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 416

Query: 518 CLAQSFK---VVNEALTSIDLAFNEIRDD 543
            L +S +    + E L   D+ ++E  +D
Sbjct: 417 QLVESVRQPGCLLEQLVLYDIYWSEEMED 445



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 41/216 (18%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIK 208
           SK +L E A          +     GD G+  L   L +  +    +     GITA G  
Sbjct: 225 SKASLRELA----------LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 274

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD---------------------------- 240
               VL++  +LK L+L+GN +GDEG + LC+                            
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334

Query: 241 -ILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEAL 298
            +L  N  +  LQ+S+  L D G + + + L +  S+LRVL L +  +  S  +SLA  L
Sbjct: 335 SVLAQNKFLLELQISNNRLEDAGVQELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L N ++R L L+ N  G  G   L + +     L E
Sbjct: 395 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430


>gi|326428417|gb|EGD73987.1| hypothetical protein PTSG_05682 [Salpingoeca sp. ATCC 50818]
          Length = 1296

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 131/241 (54%), Gaps = 10/241 (4%)

Query: 341 SIGDEG---IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            +G++G   IRA+  G          + +G  S+ ++GA  +A  ++    +  + L  N
Sbjct: 20  QLGEDGKNEIRAIADGTCG-----PAVTLGFVSLDSQGATVIAHALRQNTCVKLLGLGHN 74

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IG +GA+ +A+ L  N+TIT + L  N I ++GA A+A VL  N  +T L L +N IG 
Sbjct: 75  CIGPDGAKALANMLASNKTITILRLQSNRIGNEGAIALADVLCRNKSVTELRLHHNNIGL 134

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
            GA+AL+ +L+ +  I  + L    IG  GA+ +A+ML+ + T++ L L  N + D G +
Sbjct: 135 AGAEALANMLRTNATITHVSLFANSIGHKGAQALAEMLKDSTTLTHLKLGENAIGDAGVE 194

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 577
            LA++ +  N  L  + L  N + D  A A+A  L+ N+  AVT+L L  N +T  G + 
Sbjct: 195 ALAKALETDNSTLQVLWLNCNGLSDSSAVALANMLRRNK--AVTTLGLDINTITPGGGAE 252

Query: 578 L 578
           L
Sbjct: 253 L 253



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 116/227 (51%), Gaps = 2/227 (0%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L  V L  +GA  IA  L+ N+ +++L L +N I   G  +LA  L  N TI  L L  N
Sbjct: 43  LGFVSLDSQGATVIAHALRQNTCVKLLGLGHNCIGPDGAKALANMLASNKTITILRLQSN 102

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G  GA ALA  L  NKS+ EL LH N+IG  G  AL + L +    +  + +  NSI 
Sbjct: 103 RIGNEGAIALADVLCRNKSVTELRLHHNNIGLAGAEALANMLRT-NATITHVSLFANSIG 161

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKG 431
            KGA  +AE +K+  +L  + L  N IGD G E +A AL+  N T+  + L  N +    
Sbjct: 162 HKGAQALAEMLKDSTTLTHLKLGENAIGDAGVEALAKALETDNSTLQVLWLNCNGLSDSS 221

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           A A+A +L+ N  +T+L L  N I   G   L   L  + ++  L L
Sbjct: 222 AVALANMLRRNKAVTTLGLDINTITPGGGAELGASLHENHSLRVLTL 268



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 30/283 (10%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           V+     + + G       L+ N  +K L L  N IG +G K L ++L  N  +  L+L 
Sbjct: 41  VTLGFVSLDSQGATVIAHALRQNTCVKLLGLGHNCIGPDGAKALANMLASNKTITILRLQ 100

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           S  + +EGA A+A++L  N  +  L L++N I  +G  +LA  L  N+TI  + L  N  
Sbjct: 101 SNRIGNEGAIALADVLCRNKSVTELRLHHNNIGLAGAEALANMLRTNATITHVSLFANSI 160

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA ALA+ L+ + +L  L L  N+IGD G+ AL   L +    L V           
Sbjct: 161 GHKGAQALAEMLKDSTTLTHLKLGENAIGDAGVEALAKALETDNSTLQV----------- 209

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
                          LW+N   N + D  A  +A+ L++N+ +TT+ L  N I   G + 
Sbjct: 210 ---------------LWLNC--NGLSDSSAVALANMLRRNKAVTTLGLDINTITPGGGAE 252

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           +   L +N  +  L L++N      A+A    +  H  I T K
Sbjct: 253 LGASLHENHSLRVLTLSHNSTAT--ARAFGAAVPVHREIWTGK 293



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 2/222 (0%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
           +G   +A +L  N   + +    N I   G KA   +L SN  +  L L  N IG+EG  
Sbjct: 51  QGATVIAHALRQNTCVKLLGLGHNCIGPDGAKALANMLASNKTITILRLQSNRIGNEGAI 110

Query: 237 CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
            L D+L  N  V  L+L   ++   GA+A+A +L+ N+ +  + L  N I + G  +LAE
Sbjct: 111 ALADVLCRNKSVTELRLHHNNIGLAGAEALANMLRTNATITHVSLFANSIGHKGAQALAE 170

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLRELHLHGNSIGDEGIRALMSGLS 355
            L +++T+  L L  N  G  G  ALAK LE  N +L+ L L+ N + D    AL + L 
Sbjct: 171 MLKDSTTLTHLKLGENAIGDAGVEALAKALETDNSTLQVLWLNCNGLSDSSAVALANMLR 230

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             K  +  L +  N+I+  G   +   +    SL  + L  N
Sbjct: 231 RNKA-VTTLGLDINTITPGGGAELGASLHENHSLRVLTLSHN 271



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 111/225 (49%), Gaps = 5/225 (2%)

Query: 157 FAKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            A  LR  + V + G      G +G   LA  L  N+T   +   +N I   G  A   V
Sbjct: 56  IAHALRQNTCVKLLGLGHNCIGPDGAKALANMLASNKTITILRLQSNRIGNEGAIALADV 115

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N ++  L L  N IG  G + L ++L  NA +  + L +  +  +GA+A+AE+LK++
Sbjct: 116 LCRNKSVTELRLHHNNIGLAGAEALANMLRTNATITHVSLFANSIGHKGAQALAEMLKDS 175

Query: 274 SILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           + L  L+L  N I  +G  +LA+AL  +NST++ L LN N      A ALA  L  NK++
Sbjct: 176 TTLTHLKLGENAIGDAGVEALAKALETDNSTLQVLWLNCNGLSDSSAVALANMLRRNKAV 235

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
             L L  N+I   G   L + L      L VL + +NS +   AF
Sbjct: 236 TTLGLDINTITPGGGAELGASLHENHS-LRVLTLSHNSTATARAF 279


>gi|171915855|ref|ZP_02931325.1| Prostaglandin-E [Verrucomicrobium spinosum DSM 4136]
          Length = 538

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 145/310 (46%), Gaps = 26/310 (8%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI---LRVL 279
           +++    + D  +  L D +  N  V+   L +  + D GA  +A L+ N      L+ L
Sbjct: 178 MDMCKQVVADRHIGTLVDSVQHNVNVQHFLLGNNIVGDAGAAQVARLVSNPQTGASLQTL 237

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L  N I  SG  +LA+AL +N T++SL L  N     G   LA  LE N SL  L L  
Sbjct: 238 YLAGNCIGTSGSAALADALRDNRTVKSLWLKRNPLHLEGVQHLASMLETNASLETLDLAN 297

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY---- 395
             + DEGI  L   L  +   L  L I  N I+  GA H+A Y +  KS   + L     
Sbjct: 298 TGLFDEGIAVLFGSLR-KNSTLRTLYIDANGITPAGARHIASYFEFLKSEGRVGLTGLFA 356

Query: 396 -MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            +N +GDEGA  IA+++K    +  ++L  N I   G  ++   L+  S + +L      
Sbjct: 357 SINRLGDEGARLIAESVKGCEHLVRLELSSNRIQHAGLESL---LEAGSSLPALRY---- 409

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G    K+ S++    G +     G C      A+ +AD LR+N T+ +LDLR   LR  
Sbjct: 410 LGVGFYKSTSDL----GELPNYFDGSC------ADIIADFLRHNQTLQVLDLRDTNLRPG 459

Query: 515 GAKCLAQSFK 524
           G + + ++ +
Sbjct: 460 GLELIVEALE 469



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 139/301 (46%), Gaps = 20/301 (6%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL---QSNIALKTL 223
           +DM  +   D  +  L +S+ +N   +      N +  AG      ++   Q+  +L+TL
Sbjct: 178 MDMCKQVVADRHIGTLVDSVQHNVNVQHFLLGNNIVGDAGAAQVARLVSNPQTGASLQTL 237

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L+GN IG  G   L D L DN  V+ L L    L  EG + +A +L+ N+ L  L+L N
Sbjct: 238 YLAGNCIGTSGSAALADALRDNRTVKSLWLKRNPLHLEGVQHLASMLETNASLETLDLAN 297

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG---- 339
             +   G   L  +L +NST+R+L+++ N     GA  +A   E  KS   + L G    
Sbjct: 298 TGLFDEGIAVLFGSLRKNSTLRTLYIDANGITPAGARHIASYFEFLKSEGRVGLTGLFAS 357

Query: 340 -NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LWINLY- 395
            N +GDEG R +   +   +  L  L++ +N I   G   + E   +  +L  L +  Y 
Sbjct: 358 INRLGDEGARLIAESVKGCE-HLVRLELSSNRIQHAGLESLLEAGSSLPALRYLGVGFYK 416

Query: 396 -MNDIGD-------EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
             +D+G+         A+ IAD L+ N+T+  +DL   N+   G   I   L+ N  +  
Sbjct: 417 STSDLGELPNYFDGSCADIIADFLRHNQTLQVLDLRDTNLRPGGLELIVEALESNRSLLH 476

Query: 448 L 448
           L
Sbjct: 477 L 477



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 103/192 (53%), Gaps = 9/192 (4%)

Query: 397 NDIGDEGAEKIADALKQNRT---ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           N +GD GA ++A  +   +T   + T+ L GN I + G++A+A  L+DN  + SL L  N
Sbjct: 211 NIVGDAGAAQVARLVSNPQTGASLQTLYLAGNCIGTSGSAALADALRDNRTVKSLWLKRN 270

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           P+  +G + L+ +L+ + ++ TL L    +   G   +   LR N+T+  L + ANG+  
Sbjct: 271 PLHLEGVQHLASMLETNASLETLDLANTGLFDEGIAVLFGSLRKNSTLRTLYIDANGITP 330

Query: 514 EGAKCLAQSFKVVNE----ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
            GA+ +A  F+ +       LT +  + N + D+GA  IA+++K  E   +  L L++N 
Sbjct: 331 AGARHIASYFEFLKSEGRVGLTGLFASINRLGDEGARLIAESVKGCEH--LVRLELSSNR 388

Query: 570 LTKFGQSALTDA 581
           +   G  +L +A
Sbjct: 389 IQHAGLESLLEA 400



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)

Query: 366 IGNNSISAKGAFHVAEYIKNCK---SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           +GNN +   GA  VA  + N +   SL  + L  N IG  G+  +ADAL+ NRT+ ++ L
Sbjct: 208 LGNNIVGDAGAAQVARLVSNPQTGASLQTLYLAGNCIGTSGSAALADALRDNRTVKSLWL 267

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N +H +G   +A +L+ N+ + +LDLA   +  +G   L   L+ +  + TL +    
Sbjct: 268 KRNPLHLEGVQHLASMLETNASLETLDLANTGLFDEGIAVLFGSLRKNSTLRTLYIDANG 327

Query: 483 IGASGAEFVA---DMLRYNNTISILDLRA--NGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           I  +GA  +A   + L+    + +  L A  N L DEGA+ +A+S K   E L  ++L+ 
Sbjct: 328 ITPAGARHIASYFEFLKSEGRVGLTGLFASINRLGDEGARLIAESVKGC-EHLVRLELSS 386

Query: 538 NEIRDDGAFAIAQA 551
           N I+  G  ++ +A
Sbjct: 387 NRIQHAGLESLLEA 400



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 18/214 (8%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  E  Q L    +   +  ++D++     DEG+  L  SL  N T   +   ANGIT A
Sbjct: 272 LHLEGVQHLASMLETNASLETLDLANTGLFDEGIAVLFGSLRKNSTLRTLYIDANGITPA 331

Query: 206 G---IKAFDGVLQSN--IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
           G   I ++   L+S   + L  L  S N +GDEG + + + +     + RL+LSS  ++ 
Sbjct: 332 GARHIASYFEFLKSEGRVGLTGLFASINRLGDEGARLIAESVKGCEHLVRLELSSNRIQH 391

Query: 261 EGAKAIAELLKNNSILRVLELN-----------NNMIDYSGFTSLAEALLENSTIRSLHL 309
            G +++ E   +   LR L +             N  D S    +A+ L  N T++ L L
Sbjct: 392 AGLESLLEAGSSLPALRYLGVGFYKSTSDLGELPNYFDGSCADIIADFLRHNQTLQVLDL 451

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
                   G   + + LE N+SL  LHL+ +  G
Sbjct: 452 RDTNLRPGGLELIVEALESNRSL--LHLYADQYG 483


>gi|440797807|gb|ELR18882.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 822

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 123/255 (48%), Gaps = 25/255 (9%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK-----------------------GK 360
           + L+  + +  + L    IGD+G+  L+  L   K                       G 
Sbjct: 219 QALDDERQISAITLPALGIGDDGLAQLLDRLPPLKPMWSGDDLMLTGGPAPGQITPVVGL 278

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           +  L +  N I   GA  +A ++K    +  ++L  N IG +GAE +A+ALK N  +TT+
Sbjct: 279 ITTLILDANDIERHGAAMLANFLKTNDHVECLSLKWNMIGFDGAESLAEALKVNSRLTTL 338

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L GN I S GA AIA  LK N+ +T ++L  N +G  G  A+SE L  +  +N L L  
Sbjct: 339 QLEGNGIDSDGAIAIADALKVNTSLTDVNLKENGLGNSGVDAISEALLVNSTLNCLDLSS 398

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
             I  +G   +A+ LR N  +  L L  N L D GA  LA +    N  LTS++L  N I
Sbjct: 399 NGISYAGTT-LAESLRSNRGLRYLMLNENALFDAGATALADTL-ATNSTLTSLELRDNSI 456

Query: 541 RDDGAFAIAQALKAN 555
            +DG  A+  A++ N
Sbjct: 457 SEDGILALTDAVQTN 471



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 120/221 (54%), Gaps = 2/221 (0%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           +  L L + D+   GA  +A  LK N  +  L L  NMI + G  SLAEAL  NS + +L
Sbjct: 279 ITTLILDANDIERHGAAMLANFLKTNDHVECLSLKWNMIGFDGAESLAEALKVNSRLTTL 338

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L GN   + GA A+A  L+ N SL +++L  N +G+ G+ A+   L      L  LD+ 
Sbjct: 339 QLEGNGIDSDGAIAIADALKVNTSLTDVNLKENGLGNSGVDAISEALLV-NSTLNCLDLS 397

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           +N IS  G   +AE +++ + L ++ L  N + D GA  +AD L  N T+T+++L  N+I
Sbjct: 398 SNGISYAGTT-LAESLRSNRGLRYLMLNENALFDAGATALADTLATNSTLTSLELRDNSI 456

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
              G  A+   ++ N+V+  L++  N  G  G  AL ++LK
Sbjct: 457 SEDGILALTDAVQTNTVLVDLNVKLNQPGLRGEIALFKLLK 497



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 92/184 (50%), Gaps = 1/184 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G +G   LAE+L  N     +    NGI + G  A    L+ N +L  +NL  N +G+ 
Sbjct: 317 IGFDGAESLAEALKVNSRLTTLQLEGNGIDSDGAIAIADALKVNTSLTDVNLKENGLGNS 376

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           GV  + + L+ N+ +  L LSS  +   G   +AE L++N  LR L LN N +  +G T+
Sbjct: 377 GVDAISEALLVNSTLNCLDLSSNGISYAGT-TLAESLRSNRGLRYLMLNENALFDAGATA 435

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+ L  NST+ SL L  N     G  AL   ++ N  L +L++  N  G  G  AL   
Sbjct: 436 LADTLATNSTLTSLELRDNSISEDGILALTDAVQTNTVLVDLNVKLNQPGLRGEIALFKL 495

Query: 354 LSSR 357
           L SR
Sbjct: 496 LKSR 499


>gi|189502564|ref|YP_001958281.1| hypothetical protein Aasi_1227 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498005|gb|ACE06552.1| hypothetical protein Aasi_1227 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 430

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 137/237 (57%), Gaps = 12/237 (5%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           +  ++L GN IGD+G+   +  L   +  +  +D+  N I  +G   +A++++  + +  
Sbjct: 185 VHTVYLSGNKIGDQGVEGFVKNLQGTQ--VHTVDLSVNEIGDQGVEGLAKHLQGTR-VHT 241

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +NL  N IGD+GAE  A  L+  R + T+DL  N I ++GA  +A+ L+  +V T +DL+
Sbjct: 242 VNLSGNYIGDQGAEGFAKHLQGTR-VHTVDLSENEIGAQGAVGLAKYLQGTNVHT-VDLS 299

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IGA GA++ + +L+    ++T+ L   +IGA GA  +A  L+  N +  +DL  N +
Sbjct: 300 ANQIGAQGAESFARLLQG-TRVHTVDLSRNEIGAQGAVGLAKYLQGTN-VHTVDLSNNEI 357

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            D+GA+  ++  +     + ++DL++NEI D GA A+A+ L+      V ++NL +N
Sbjct: 358 GDQGAEGFSKHLQ--GTRVHTVDLSYNEIGDQGAEALAKHLQGTR---VHTVNLRSN 409



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 143/304 (47%), Gaps = 65/304 (21%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + T+ LSGN IGD+GV+     L     V  + LS  ++ D+G + +A+ L         
Sbjct: 185 VHTVYLSGNKIGDQGVEGFVKNL-QGTQVHTVDLSVNEIGDQGVEGLAKHL--------- 234

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
                               + + + +++L+GNY G  GA   AK L+G           
Sbjct: 235 --------------------QGTRVHTVNLSGNYIGDQGAEGFAKHLQGT---------- 264

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
                               ++  +D+  N I A+GA  +A+Y++   ++  ++L  N I
Sbjct: 265 --------------------RVHTVDLSENEIGAQGAVGLAKYLQGT-NVHTVDLSANQI 303

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G +GAE  A  L+  R + T+DL  N I ++GA  +A+ L+  +V T +DL+ N IG  G
Sbjct: 304 GAQGAESFARLLQGTR-VHTVDLSRNEIGAQGAVGLAKYLQGTNVHT-VDLSNNEIGDQG 361

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           A+  S+ L+    ++T+ L + +IG  GAE +A  L+    +  ++LR+N +  +  + L
Sbjct: 362 AEGFSKHLQG-TRVHTVDLSYNEIGDQGAEALAKHLQ-GTRVHTVNLRSNNIGPDVQRLL 419

Query: 520 AQSF 523
            + +
Sbjct: 420 VEQY 423



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 38/276 (13%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +T   + +E R  + V +SG   GD+G+    ++L   Q    V  + N I   G++   
Sbjct: 174 RTFWPYLQEARVHT-VYLSGNKIGDQGVEGFVKNLQGTQ-VHTVDLSVNEIGDQGVEGLA 231

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             LQ    + T+NLSGN IGD+G +     L     V  + LS  ++  +GA  +A+ L+
Sbjct: 232 KHLQGT-RVHTVNLSGNYIGDQGAEGFAKHL-QGTRVHTVDLSENEIGAQGAVGLAKYLQ 289

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             ++   ++L+ N I   G  S A  LL+ + + ++ L+ N  GA GA  LAK L+G   
Sbjct: 290 GTNV-HTVDLSANQIGAQGAESFAR-LLQGTRVHTVDLSRNEIGAQGAVGLAKYLQGT-- 345

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
                                        +  +D+ NN I  +GA   +++++  + +  
Sbjct: 346 ----------------------------NVHTVDLSNNEIGDQGAEGFSKHLQGTR-VHT 376

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           ++L  N+IGD+GAE +A  L+  R + T++L  NNI
Sbjct: 377 VDLSYNEIGDQGAEALAKHLQGTR-VHTVNLRSNNI 411


>gi|397527066|ref|XP_003833425.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Pan paniscus]
          Length = 953

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           ++A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N I ++G  ++AR
Sbjct: 803 YLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQS 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N+ I+ + L  N ++ E AK      +++
Sbjct: 923 NSGITEICLNGNLIKPEEAKVYEDEKRII 951



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++ TL L    I   G + +A  L+ N ++ IL L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL++N  +    LN
Sbjct: 895 -NQTLKHLWLIQNQITAKGTAQLADALQSNSGITEICLN 932



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 114/246 (46%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L LS N I D GVK L + L     V  L L +  + D GA+ + ++L     L  L
Sbjct: 730 LTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G                    G Y        LA  ++ +KS+ E+ + G
Sbjct: 790 KLGKNKITSEG--------------------GKY--------LALAVKNSKSISEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GDEG +A    L +    L  L + +N IS +G   +A  ++   SL  + L  N++
Sbjct: 822 NQVGDEGAKAFAEALRNHPS-LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I +KG + +A  L+ NS IT + L  N I  + 
Sbjct: 881 NDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNSGITEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVYED 946



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 81/153 (52%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +  + + +       EG  +LA ++  +++  EV    N +   G KAF   L+++ +
Sbjct: 782 ECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +E L L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  NS I  + LNGN
Sbjct: 902 WLIQNQITAKGTAQLADALQSNSGITEICLNGN 934



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNSG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 91/200 (45%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L+E L   +    +    N IT  G +    +L     L  L L  N
Sbjct: 735 LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKN 794

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG K L   + ++  +  + +    + DEGAKA AE L+N+  L  L L +N I  
Sbjct: 795 KITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGIST 854

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+ L L  N I  +G  
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTA 914

Query: 349 ALMSGLSSRKGKLAVLDIGN 368
            L   L S  G   +   GN
Sbjct: 915 QLADALQSNSGITEICLNGN 934



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T L L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L     ++
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLT 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG K LA + K  +++++ + +  N++ D+GA A A+AL+ +   ++T+
Sbjct: 788 HLKLGKNKITSEGGKYLALAVKN-SKSISEVGMWGNQVGDEGAKAFAEALRNHP--SLTT 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA+N ++  G  +L  A
Sbjct: 845 LSLASNGISTEGGKSLARA 863


>gi|145534580|ref|XP_001453034.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420734|emb|CAK85637.1| unnamed protein product [Paramecium tetraurelia]
          Length = 399

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 149/299 (49%), Gaps = 13/299 (4%)

Query: 176 DEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           D+ L  L   L  Y +  + +  + N IT  G++     L    +L++LNL  N IG EG
Sbjct: 58  DQDLILLLSCLQNYKENIQHIDLSFNEITNVGVQELSKFLSGCNSLESLNLQSNKIGVEG 117

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            + + + + D   +  L L+  +L+ +GA +I E+L NN  +  L L NN ID+ G  ++
Sbjct: 118 GELIAEGIKDIQTLTHLNLNFNNLQTKGAMSIVEMLFNNKSIVELNLANNGIDHDGVIAI 177

Query: 295 AEAL-LENSTIRSLHLNGNYGGALG---ANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              L  +N+T++ L+L+     ++G   A    K    N+ L ++ L  ++   + I  +
Sbjct: 178 TSILNWKNNTLQILNLDNPVYHSIGQETAIHFGKMFHSNRGLEKISLQKHNFTCDAIYII 237

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNC--KSLLWINLYMNDIGDEGAEK 406
              L     KL VLD+  N IS KG   +A+Y+  + C  +SL+   L  N  G  GA+ 
Sbjct: 238 TEHL-LENNKLRVLDLTANRISFKGCEAIAKYLCGEYCVLESLI---LTSNRTGHYGAKA 293

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
           I+ AL +NRT+  +D+  N+I   G   IA  L+ N ++ SL L  N  G    +A  +
Sbjct: 294 ISQALSKNRTLIHLDMVRNDIDDNGLKMIAESLETNDMLVSLKLYQNHFGQMALQAFHK 352



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 119/242 (49%), Gaps = 6/242 (2%)

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D+ +  L+S L + K  +  +D+  N I+  G   +++++  C SL  +NL  N IG EG
Sbjct: 58  DQDLILLLSCLQNYKENIQHIDLSFNEITNVGVQELSKFLSGCNSLESLNLQSNKIGVEG 117

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            E IA+ +K  +T+T ++L  NN+ +KGA +I  +L +N  I  L+LA N I  DG  A+
Sbjct: 118 GELIAEGIKDIQTLTHLNLNFNNLQTKGAMSIVEMLFNNKSIVELNLANNGIDHDGVIAI 177

Query: 464 SEVLKFHGN-INTLKLG---WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           + +L +  N +  L L    +  IG   A     M   N  +  + L+ +    +    +
Sbjct: 178 TSILNWKNNTLQILNLDNPVYHSIGQETAIHFGKMFHSNRGLEKISLQKHNFTCDAIYII 237

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
            +   + N  L  +DL  N I   G  AIA+ L   E   + SL L +N    +G  A++
Sbjct: 238 TEHL-LENNKLRVLDLTANRISFKGCEAIAKYL-CGEYCVLESLILTSNRTGHYGAKAIS 295

Query: 580 DA 581
            A
Sbjct: 296 QA 297



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 33/297 (11%)

Query: 247 GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
            ++ + LS  ++ + G + +++ L   + L  L L +N I   G   +AE + +  T+  
Sbjct: 74  NIQHIDLSFNEITNVGVQELSKFLSGCNSLESLNLQSNKIGVEGGELIAEGIKDIQTLTH 133

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L+LN N     GA ++ + L  NKS+ EL+L  N I  +G+ A+ S L+ +   L +L++
Sbjct: 134 LNLNFNNLQTKGAMSIVEMLFNNKSIVELNLANNGIDHDGVIAITSILNWKNNTLQILNL 193

Query: 367 GN---NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
            N   +SI  + A H  +   + + L  I+L  ++   +    I + L +N  +  +DL 
Sbjct: 194 DNPVYHSIGQETAIHFGKMFHSNRGLEKISLQKHNFTCDAIYIITEHLLENNKLRVLDLT 253

Query: 424 GNNIHSKGASAIARVL-KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            N I  KG  AIA+ L  +  V+ SL L  N  G  GAKA+S+ L               
Sbjct: 254 ANRISFKGCEAIAKYLCGEYCVLESLILTSNRTGHYGAKAISQALS-------------- 299

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
                          N T+  LD+  N + D G K +A+S +  N+ L S+ L  N 
Sbjct: 300 --------------KNRTLIHLDMVRNDIDDNGLKMIAESLE-TNDMLVSLKLYQNH 341



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 33/238 (13%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L++F     +  S+++     G EG   +AE +   QT   ++   N +   G  +  
Sbjct: 91  QELSKFLSGCNSLESLNLQSNKIGVEGGELIAEGIKDIQTLTHLNLNFNNLQTKGAMSIV 150

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-----------VDNA-------------- 246
            +L +N ++  LNL+ N I  +GV  +  IL           +DN               
Sbjct: 151 EMLFNNKSIVELNLANNGIDHDGVIAITSILNWKNNTLQILNLDNPVYHSIGQETAIHFG 210

Query: 247 -------GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
                  G+E++ L   +   +    I E L  N+ LRVL+L  N I + G  ++A+ L 
Sbjct: 211 KMFHSNRGLEKISLQKHNFTCDAIYIITEHLLENNKLRVLDLTANRISFKGCEAIAKYLC 270

Query: 300 -ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
            E   + SL L  N  G  GA A+++ L  N++L  L +  N I D G++ +   L +
Sbjct: 271 GEYCVLESLILTSNRTGHYGAKAISQALSKNRTLIHLDMVRNDIDDNGLKMIAESLET 328


>gi|302791555|ref|XP_002977544.1| hypothetical protein SELMODRAFT_31007 [Selaginella moellendorffii]
 gi|300154914|gb|EFJ21548.1| hypothetical protein SELMODRAFT_31007 [Selaginella moellendorffii]
          Length = 521

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 137/269 (50%), Gaps = 2/269 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L+S   L+ L    N I  +  K + + LV  + +  L   +    
Sbjct: 216 NALGEKGVRAFGSLLKSQKHLEDLRFENNGISSDAAKAIVE-LVSGSKLRTLHFHNNMSG 274

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+ IA L++  + L   +L+++ +   G  +LAEAL   S+++ L L  N  G  G 
Sbjct: 275 DLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSLKKLDLRDNIFGEEGG 334

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL K       L EL+L    + + G++A++  L +   KL+VLD+GNN IS   A H+
Sbjct: 335 FALGKAFRTQPLLEELYLSDLGLQNAGVQAVLEALETTAPKLSVLDLGNNDISTSCAPHL 394

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARV 438
             +++   +L  ++L  N++ D+G   +++AL+Q +  +  +D   N++ S GA A A+ 
Sbjct: 395 VRFLEKKAALKKLSLAENELKDKGVILVSNALRQGHDDLEELDFTLNDVGSDGAIAAAKA 454

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVL 467
           +        L L  N I A G  ++  VL
Sbjct: 455 VTTKPRFKLLILESNHISAKGLASVRSVL 483



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 117/233 (50%), Gaps = 5/233 (2%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           LEG+  LR L+L  N++G++G+RA  S L S+K  L  L   NN IS+  A  + E +  
Sbjct: 203 LEGS-DLRFLYLSNNALGEKGVRAFGSLLKSQK-HLEDLRFENNGISSDAAKAIVELVSG 260

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            K L  ++ + N  GD GAE+IA  ++Q   +    L  + + +KGA A+A  L+  S +
Sbjct: 261 SK-LRTLHFHNNMSGDLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSL 319

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NTISIL 504
             LDL  N  G +G  AL +  +    +  L L    +  +G + V + L      +S+L
Sbjct: 320 KKLDLRDNIFGEEGGFALGKAFRTQPLLEELYLSDLGLQNAGVQAVLEALETTAPKLSVL 379

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
           DL  N +    A  L + F     AL  + LA NE++D G   ++ AL+   D
Sbjct: 380 DLGNNDISTSCAPHLVR-FLEKKAALKKLSLAENELKDKGVILVSNALRQGHD 431



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 5/167 (2%)

Query: 157 FAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            A+ L+A SS+   D+    FG+EG F L ++       EE+  +  G+  AG++A    
Sbjct: 309 LAEALQACSSLKKLDLRDNIFGEEGGFALGKAFRTQPLLEELYLSDLGLQNAGVQAVLEA 368

Query: 214 LQSNIA-LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           L++    L  L+L  N I       L   L   A +++L L+  +L+D+G   ++  L+ 
Sbjct: 369 LETTAPKLSVLDLGNNDISTSCAPHLVRFLEKKAALKKLSLAENELKDKGVILVSNALRQ 428

Query: 273 -NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            +  L  L+   N +   G  + A+A+      + L L  N+  A G
Sbjct: 429 GHDDLEELDFTLNDVGSDGAIAAAKAVTTKPRFKLLILESNHISAKG 475


>gi|148231251|ref|NP_001088808.1| leucine rich repeat containing 34 [Xenopus laevis]
 gi|124481830|gb|AAI33241.1| LOC496076 protein [Xenopus laevis]
          Length = 415

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 119/242 (49%), Gaps = 33/242 (13%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DE   AL   LS +   +  LD+  N+++  GA H+A +++N  SLL +N+  NDIG 
Sbjct: 55  VSDEDFLALTRVLS-KNCFITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGT 113

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA---------- 451
           +GAE+I  AL +N ++ ++ + GN I +KG    A +L+ NS +  LDL           
Sbjct: 114 DGAERITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLI 173

Query: 452 ---------------------YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
                                +  I  D    LSE+L+ +  +  L L   ++   G + 
Sbjct: 174 ALATVLLQNKTLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQR 233

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           + D L  N  +  LDL  N +  +G KCLA+  K  N+ L  +DLA N + DDGA  +A+
Sbjct: 234 LCDALHENYALKHLDLSCNKITRDGVKCLAEVLK-RNKTLEILDLASNRMEDDGAIYLAE 292

Query: 551 AL 552
           A+
Sbjct: 293 AI 294



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 123/259 (47%), Gaps = 11/259 (4%)

Query: 222 TLNLSGN-------PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           TL L GN        + DE    L  +L  N  +  L L   +L D GA  IA  L+NNS
Sbjct: 40  TLKLCGNNRLVQVQRVSDEDFLALTRVLSKNCFITNLDLRYNNLTDNGAAHIATFLQNNS 99

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L +  N I   G   + +AL  NS++ SL + GN  G  G    A  L+ N SL E
Sbjct: 100 SLLCLNIMGNDIGTDGAERITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEE 159

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN---NSISAKGAFHVAEYIKNCKSLLW 391
           L L    +G + + AL + L   K  L  +++       I      H++E ++   +L  
Sbjct: 160 LDLGDCDLGIQSLIALATVLLQNK-TLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQE 218

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  +++ D G +++ DAL +N  +  +DL  N I   G   +A VLK N  +  LDLA
Sbjct: 219 LHLSKHEMTDFGVQRLCDALHENYALKHLDLSCNKITRDGVKCLAEVLKRNKTLEILDLA 278

Query: 452 YNPIGADGAKALSEVLKFH 470
            N +  DGA  L+E +  +
Sbjct: 279 SNRMEDDGAIYLAEAIYLY 297



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 10/313 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+   N  D G   +A  L  N +   ++   N I   G +     L  N +L +L
Sbjct: 73  ITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGTDGAERITKALHRNSSLLSL 132

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            ++GN IG++G      +L  N+ +E L L   DL  +   A+A +L  N  L+ + LN 
Sbjct: 133 RMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLIALATVLLQNKTLKSVNLNR 192

Query: 284 NM---IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            +   I       L+E L  NST++ LHL+ +     G   L   L  N +L+ L L  N
Sbjct: 193 PLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQRLCDALHENYALKHLDLSCN 252

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMND 398
            I  +G++ L   L  R   L +LD+ +N +   GA ++AE  Y+ N +SL  +++  N+
Sbjct: 253 KITRDGVKCLAEVLK-RNKTLEILDLASNRMEDDGAIYLAEAIYLYN-RSLKALSVVSNN 310

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I  +G + +A A+  N  +  I + GN I  + + A + +LK    ++S      P   D
Sbjct: 311 IRGKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLLKSGR-LSSSSTDVQPYVVD 369

Query: 459 GAKALSEVLKFHG 471
           G   L+E+  FHG
Sbjct: 370 GRACLAEL--FHG 380



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 164/343 (47%), Gaps = 20/343 (5%)

Query: 145 KLFRESKQTLNEFAKELRA--------FSSVDMSGRN-------FGDEGLFFLAESLGYN 189
           ++  E KQ +N F  E+ +         S++ + G N         DE    L   L  N
Sbjct: 11  EMCSEQKQPVNPFIAEILSQTEEQELYASTLKLCGNNRLVQVQRVSDEDFLALTRVLSKN 70

Query: 190 QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVE 249
                +    N +T  G       LQ+N +L  LN+ GN IG +G + +   L  N+ + 
Sbjct: 71  CFITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGTDGAERITKALHRNSSLL 130

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
            L+++   + ++G    A +L+ NS L  L+L +  +      +LA  LL+N T++S++L
Sbjct: 131 SLRMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLIALATVLLQNKTLKSVNL 190

Query: 310 NGNYGGALGANA---LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           N      +  +    L++ L  N +L+ELHL  + + D G++ L   L      L  LD+
Sbjct: 191 NRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQRLCDALHENYA-LKHLDL 249

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGN 425
             N I+  G   +AE +K  K+L  ++L  N + D+GA  +A+A+   NR++  + +  N
Sbjct: 250 SCNKITRDGVKCLAEVLKRNKTLEILDLASNRMEDDGAIYLAEAIYLYNRSLKALSVVSN 309

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           NI  KG  A+A  +  N+ +  + +  N I  + + A S +LK
Sbjct: 310 NIRGKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLLK 352



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG-YNQTAEEVSFAANGIT 203
           K+ R+  + L E  K  +    +D++     D+G  +LAE++  YN++ + +S  +N I 
Sbjct: 253 KITRDGVKCLAEVLKRNKTLEILDLASNRMEDDGAIYLAEAIYLYNRSLKALSVVSNNIR 312

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD--- 260
             G+KA    + +N  L  + + GN I +E       +L   +G  RL  SS D++    
Sbjct: 313 GKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLL--KSG--RLSSSSTDVQPYVV 368

Query: 261 EGAKAIAELL 270
           +G   +AEL 
Sbjct: 369 DGRACLAELF 378


>gi|291406721|ref|XP_002719621.1| PREDICTED: nucleotide-binding oligomerization domain containing
           2-like [Oryctolagus cuniculus]
          Length = 491

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 139/267 (52%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  L+I
Sbjct: 115 MNLNHHGLGPKGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEMLQENY-YLQELNI 173

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +N +  +GA  ++E+++   S LW + L  N+  +E A  ++ A+  N  I  ++L  N
Sbjct: 174 SDNDLGLEGAKIISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSSNYQIKKLNLSHN 233

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               +G   + ++L  N  + SLDL++N     GA AL   L+ +  + TL L     G 
Sbjct: 234 QFSDQGGEQLGQMLALNVGLKSLDLSWNHFHIRGAVALCNGLRANVTLKTLDLSMNGFGN 293

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + ++LR +N +  LD+  N + ++GA  L++  +  NE+L  + L+ N I  DGA
Sbjct: 294 EGALALGEVLRLSNCLVFLDVSGNDINNDGASKLSRGLEY-NESLRVLKLSLNPITMDGA 352

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  ++K N    +  L+++N  +T+
Sbjct: 353 TLLVMSIKKNPKSRLEELDISNVLVTE 379



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 132/248 (53%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G +G K +   LV N  + +L+L    + +EG  ++ E+L+ N  L
Sbjct: 109 NMEEPYMNLNHHGLGPKGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEMLQENYYL 168

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L +++N +   G   ++E L  N S++  L L+GN      A  L++ +  N  +++L
Sbjct: 169 QELNISDNDLGLEGAKIISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSSNYQIKKL 228

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L  N   D+G   L   L+   G L  LD+  N    +GA  +   ++   +L  ++L 
Sbjct: 229 NLSHNQFSDQGGEQLGQMLALNVG-LKSLDLSWNHFHIRGAVALCNGLRANVTLKTLDLS 287

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+EGA  + + L+ +  +  +D+ GN+I++ GAS ++R L+ N  +  L L+ NPI
Sbjct: 288 MNGFGNEGALALGEVLRLSNCLVFLDVSGNDINNDGASKLSRGLEYNESLRVLKLSLNPI 347

Query: 456 GADGAKAL 463
             DGA  L
Sbjct: 348 TMDGATLL 355



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 147/313 (46%), Gaps = 32/313 (10%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++++    G +G   +A +L  N T  ++    N I   G+ +   +LQ N  L+ LN+S
Sbjct: 115 MNLNHHGLGPKGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEMLQENYYLQELNIS 174

Query: 227 GNPIGDEGVKCLCDILVDNA-GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N +G EG K + + L  NA  + +L+LS  + ++E A  +++ + +N  ++ L L++N 
Sbjct: 175 DNDLGLEGAKIISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSSNYQIKKLNLSHNQ 234

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G   L + L  N  ++SL L+ N+    GA AL  GL  N +L+ L L  N  G+E
Sbjct: 235 FSDQGGEQLGQMLALNVGLKSLDLSWNHFHIRGAVALCNGLRANVTLKTLDLSMNGFGNE 294

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL   L                            + NC  L+++++  NDI ++GA 
Sbjct: 295 GALALGEVLR---------------------------LSNC--LVFLDVSGNDINNDGAS 325

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKAL 463
           K++  L+ N ++  + L  N I   GA+ +   +K N  S +  LD++   +     K L
Sbjct: 326 KLSRGLEYNESLRVLKLSLNPITMDGATLLVMSIKKNPKSRLEELDISNVLVTEQFTKML 385

Query: 464 SEVLKFHGNINTL 476
             V   H  ++ L
Sbjct: 386 DGVYAVHPQLDVL 398



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 132/258 (51%), Gaps = 2/258 (0%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            + N     + L+   L  +G KAIA  L +N+ +  LEL +N I   G  SL E L EN
Sbjct: 106 FIRNMEEPYMNLNHHGLGPKGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEMLQEN 165

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
             ++ L+++ N  G  GA  +++ L+ N  SL +L L GN+  +E   AL+S   S   +
Sbjct: 166 YYLQELNISDNDLGLEGAKIISEFLQRNASSLWKLKLSGNNFKEESA-ALLSQAMSSNYQ 224

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           +  L++ +N  S +G   + + +     L  ++L  N     GA  + + L+ N T+ T+
Sbjct: 225 IKKLNLSHNQFSDQGGEQLGQMLALNVGLKSLDLSWNHFHIRGAVALCNGLRANVTLKTL 284

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           DL  N   ++GA A+  VL+ ++ +  LD++ N I  DGA  LS  L+++ ++  LKL  
Sbjct: 285 DLSMNGFGNEGALALGEVLRLSNCLVFLDVSGNDINNDGASKLSRGLEYNESLRVLKLSL 344

Query: 481 CQIGASGAEFVADMLRYN 498
             I   GA  +   ++ N
Sbjct: 345 NPITMDGATLLVMSIKKN 362



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           V+ +I+N +   ++NL  + +G +G + IA AL  N TI  ++L  N I  +G  ++  +
Sbjct: 103 VSYFIRNMEEP-YMNLNHHGLGPKGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEM 161

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRY 497
           L++N  +  L+++ N +G +GAK +SE L+ +  ++  LKL         A  ++  +  
Sbjct: 162 LQENYYLQELNISDNDLGLEGAKIISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSS 221

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
           N  I  L+L  N   D+G + L Q    +N  L S+DL++N     GA A+   L+AN  
Sbjct: 222 NYQIKKLNLSHNQFSDQGGEQLGQML-ALNVGLKSLDLSWNHFHIRGAVALCNGLRAN-- 278

Query: 558 VAVTSLNLANN 568
           V + +L+L+ N
Sbjct: 279 VTLKTLDLSMN 289



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 4/219 (1%)

Query: 149 ESKQTLNEF-AKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + ++EF  +   +   + +SG NF +E    L++++  N   ++++ + N  +  G 
Sbjct: 181 EGAKIISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSSNYQIKKLNLSHNQFSDQGG 240

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N+ LK+L+LS N     G   LC+ L  N  ++ L LS     +EGA A+ 
Sbjct: 241 EQLGQMLALNVGLKSLDLSWNHFHIRGAVALCNGLRANVTLKTLDLSMNGFGNEGALALG 300

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E+L+ ++ L  L+++ N I+  G + L+  L  N ++R L L+ N     GA  L   ++
Sbjct: 301 EVLRLSNCLVFLDVSGNDINNDGASKLSRGLEYNESLRVLKLSLNPITMDGATLLVMSIK 360

Query: 328 GNKS--LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            N    L EL +  N +  E    ++ G+ +   +L VL
Sbjct: 361 KNPKSRLEELDI-SNVLVTEQFTKMLDGVYAVHPQLDVL 398


>gi|302786738|ref|XP_002975140.1| hypothetical protein SELMODRAFT_31008 [Selaginella moellendorffii]
 gi|300157299|gb|EFJ23925.1| hypothetical protein SELMODRAFT_31008 [Selaginella moellendorffii]
          Length = 521

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 137/269 (50%), Gaps = 2/269 (0%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L+S   L+ L    N I  +  K + + LV  + +  L   +    
Sbjct: 216 NALGEKGVRAFGSLLKSQKHLEDLRFENNGISSDAAKAIVE-LVSGSKLRTLHFHNNMSG 274

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+ IA L++  + L   +L+++ +   G  +LAEAL   S+++ L L  N  G  G 
Sbjct: 275 DLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSLKKLDLRDNIFGEEGG 334

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL K       L EL+L    + + G++A++  L +   KL+VLD+GNN IS   A H+
Sbjct: 335 FALGKAFRTQPLLEELYLSDLGLQNAGVQAVLEALETTAPKLSVLDLGNNDISTSCAPHL 394

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARV 438
             +++   +L  ++L  N++ D+G   +++AL+Q +  +  +D   N++ S GA A A+ 
Sbjct: 395 VRFLEKKAALKKLSLAENELKDKGVILVSNALRQGHDDLEELDFTLNDVGSDGAIAAAKA 454

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVL 467
           +        L L  N I A G  ++  VL
Sbjct: 455 VTTKPRFKLLILESNHISAKGLASVRSVL 483



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 117/233 (50%), Gaps = 5/233 (2%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           LEG+  LR L+L  N++G++G+RA  S L S+K  L  L   NN IS+  A  + E +  
Sbjct: 203 LEGS-DLRFLYLSNNALGEKGVRAFGSLLKSQK-HLEDLRFENNGISSDAAKAIVELVSG 260

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            K L  ++ + N  GD GAE+IA  ++Q   +    L  + + +KGA A+A  L+  S +
Sbjct: 261 SK-LRTLHFHNNMSGDLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSL 319

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NTISIL 504
             LDL  N  G +G  AL +  +    +  L L    +  +G + V + L      +S+L
Sbjct: 320 KKLDLRDNIFGEEGGFALGKAFRTQPLLEELYLSDLGLQNAGVQAVLEALETTAPKLSVL 379

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
           DL  N +    A  L + F     AL  + LA NE++D G   ++ AL+   D
Sbjct: 380 DLGNNDISTSCAPHLVR-FLEKKAALKKLSLAENELKDKGVILVSNALRQGHD 431


>gi|390342621|ref|XP_787322.3| PREDICTED: uncharacterized protein C14orf166B homolog
           [Strongylocentrotus purpuratus]
          Length = 678

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 139/278 (50%), Gaps = 3/278 (1%)

Query: 191 TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER 250
           T   VS   +G+   G KA    L +N  + TL+L  N +  +G   + D+L +N  +  
Sbjct: 150 TTSRVSMKHHGLGPHGAKAIAVALVANTTVLTLDLEDNWVEGDGGVYIADMLKENCYIND 209

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L+   +   GAKA+ E+L +N+ LR + L+ N           E+   N  I+ L L+
Sbjct: 210 LNLAENKIGSRGAKAMGEMLLDNTNLRRVNLSGNEFKDKDANEFTESFKSNYRIKELILS 269

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G +G   L  G+   +S+  L+L  N +  +G  A+  GL+     +  L++  N 
Sbjct: 270 HNEFGEVGGEILGHGIGATESIEHLNLSWNHLRRKGAIAICRGLAENLS-IKRLNLSWNG 328

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
              +GA  +AE +K   +L W+++  N + +EGA  +A  ++ N +I  + LG N I + 
Sbjct: 329 FGNEGALAMAEALKFNSTLQWLDMSNNRVTNEGAFMLAKGVEINDSIKVLKLGQNPITAA 388

Query: 431 GASAIARVLKDNS--VITSLDLAYNPIGADGAKALSEV 466
           GA AI   +K+NS  V+  LDLA   +  D  K L+E+
Sbjct: 389 GAMAILIAIKNNSNTVLELLDLADITVNKDCVKLLTEL 426



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 66/368 (17%)

Query: 228 NPIGDEGVKCLC-DILVDNAG-------VERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           +P G +  K  C DI V  A          R+ +    L   GAKAIA  L  N+ +  L
Sbjct: 123 DPTGRKTYKQACLDIGVVPASHFLRHMTTSRVSMKHHGLGPHGAKAIAVALVANTTVLTL 182

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L +N ++  G   +A+ L EN  I  L+L  N  G+ GA A+ + L  N +LR ++L G
Sbjct: 183 DLEDNWVEGDGGVYIADMLKENCYINDLNLAENKIGSRGAKAMGEMLLDNTNLRRVNLSG 242

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N   D+                   D    + S K  + + E I          L  N+ 
Sbjct: 243 NEFKDK-------------------DANEFTESFKSNYRIKELI----------LSHNEF 273

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G+ G E +   +    +I  ++L  N++  KGA AI R L +N  I  L+L++N  G +G
Sbjct: 274 GEVGGEILGHGIGATESIEHLNLSWNHLRRKGAIAICRGLAENLSIKRLNLSWNGFGNEG 333

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           A A++E LKF                            N+T+  LD+  N + +EGA  L
Sbjct: 334 ALAMAEALKF----------------------------NSTLQWLDMSNNRVTNEGAFML 365

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
           A+  + +N+++  + L  N I   GA AI  A+K N +  +  L+LA+  + K     LT
Sbjct: 366 AKGVE-INDSIKVLKLGQNPITAAGAMAILIAIKNNSNTVLELLDLADITVNKDCVKLLT 424

Query: 580 DAKDLVYE 587
           + K++  E
Sbjct: 425 ELKEVRPE 432



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 83/163 (50%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           V++SG  F D+      ES   N   +E+  + N     G +     + +  +++ LNLS
Sbjct: 238 VNLSGNEFKDKDANEFTESFKSNYRIKELILSHNEFGEVGGEILGHGIGATESIEHLNLS 297

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N +  +G   +C  L +N  ++RL LS     +EGA A+AE LK NS L+ L+++NN +
Sbjct: 298 WNHLRRKGAIAICRGLAENLSIKRLNLSWNGFGNEGALAMAEALKFNSTLQWLDMSNNRV 357

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
              G   LA+ +  N +I+ L L  N   A GA A+   ++ N
Sbjct: 358 TNEGAFMLAKGVEINDSIKVLKLGQNPITAAGAMAILIAIKNN 400



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 5/263 (1%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +  KE    + ++++    G  G   + E L  N     V+ + N         F    +
Sbjct: 199 DMLKENCYINDLNLAENKIGSRGAKAMGEMLLDNTNLRRVNLSGNEFKDKDANEFTESFK 258

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           SN  +K L LS N  G+ G + L   +     +E L LS   LR +GA AI   L  N  
Sbjct: 259 SNYRIKELILSHNEFGEVGGEILGHGIGATESIEHLNLSWNHLRRKGAIAICRGLAENLS 318

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           ++ L L+ N     G  ++AEAL  NST++ L ++ N     GA  LAKG+E N S++ L
Sbjct: 319 IKRLNLSWNGFGNEGALAMAEALKFNSTLQWLDMSNNRVTNEGAFMLAKGVEINDSIKVL 378

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
            L  N I   G  A++  + +     L +LD+ + +++ K    +   +K  +    +  
Sbjct: 379 KLGQNPITAAGAMAILIAIKNNSNTVLELLDLADITVN-KDCVKLLTELKEVRPEFLV-A 436

Query: 395 YMNDIG--DEGAEKIADALKQNR 415
           Y + +G  ++  EK  D +K  R
Sbjct: 437 YQSSVGQFEKPPEKEPDPVKMLR 459


>gi|156341516|ref|XP_001620787.1| hypothetical protein NEMVEDRAFT_v1g195848 [Nematostella vectensis]
 gi|156206119|gb|EDO28687.1| predicted protein [Nematostella vectensis]
          Length = 337

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 139/264 (52%), Gaps = 13/264 (4%)

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI---- 347
           TSL ++L  NST+ ++H+N    G   A+ LAK L  N SL  +++ G  +GD G+    
Sbjct: 3   TSLFKSLKNNSTLSAIHINFYSSGDACASELAKVLVDNTSLNAVYIAGAYLGDAGVASIA 62

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            ALM   + R      L I   +++ +    + E +K+  ++  ++L   +IGD GA  I
Sbjct: 63  EALMVNTTVR-----ALGIRGENMTPEAGRALGEMLKHNTTITCLSLIQGNIGDSGALCI 117

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           A  L QN T+  I +  + I + G SA+A+V+++   +T LDL+ + IG  GAKA+++V+
Sbjct: 118 ASGLSQNTTLDKIQIKNSGIGATGVSALAKVIQN---VTYLDLSKSIIGTKGAKAIAKVI 174

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
           +    +  L++  C I   G   +A  L  N  +  L +   G+ DEG   LA+S    +
Sbjct: 175 ENCCKLKYLRIDHCNIDVFGVRDIAQALSKNTNLEELSVACAGIDDEGMCKLARSVG-KH 233

Query: 528 EALTSIDLAFNEIRDDGAFAIAQA 551
           ++L  + +  N I + G  AI +A
Sbjct: 234 KSLQVLTITHNNISEKGKRAIIEA 257



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 129/265 (48%), Gaps = 8/265 (3%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L  ++++    GD     L  +LVDN  +  + ++   L D G  +IAE L  N
Sbjct: 9   LKNNSTLSAIHINFYSSGDACASELAKVLVDNTSLNAVYIAGAYLGDAGVASIAEALMVN 68

Query: 274 SILRVLELN-NNMIDYSGFTSLAEALLENSTIRSLHL-NGNYGGALGANALAKGLEGNKS 331
           + +R L +   NM   +G  +L E L  N+TI  L L  GN G + GA  +A GL  N +
Sbjct: 69  TTVRALGIRGENMTPEAG-RALGEMLKHNTTITCLSLIQGNIGDS-GALCIASGLSQNTT 126

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L ++ +  + IG  G+ AL   + +    +  LD+  + I  KGA  +A+ I+NC  L +
Sbjct: 127 LDKIQIKNSGIGATGVSALAKVIQN----VTYLDLSKSIIGTKGAKAIAKVIENCCKLKY 182

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + +   +I   G   IA AL +N  +  + +    I  +G   +AR +  +  +  L + 
Sbjct: 183 LRIDHCNIDVFGVRDIAQALSKNTNLEELSVACAGIDDEGMCKLARSVGKHKSLQVLTIT 242

Query: 452 YNPIGADGAKALSEVLKFHGNINTL 476
           +N I   G +A+ E      ++N L
Sbjct: 243 HNNISEKGKRAIIEACAESQSLNHL 267



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 137/276 (49%), Gaps = 8/276 (2%)

Query: 182 LAESLGYNQT--AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLC 239
           L +SL  N T  A  ++F ++G   A       VL  N +L  + ++G  +GD GV  + 
Sbjct: 5   LFKSLKNNSTLSAIHINFYSSGDACA--SELAKVLVDNTSLNAVYIAGAYLGDAGVASIA 62

Query: 240 DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
           + L+ N  V  L +   ++  E  +A+ E+LK+N+ +  L L    I  SG   +A  L 
Sbjct: 63  EALMVNTTVRALGIRGENMTPEAGRALGEMLKHNTTITCLSLIQGNIGDSGALCIASGLS 122

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
           +N+T+  + +  +  GA G +ALAK ++   ++  L L  + IG +G +A+ + +     
Sbjct: 123 QNTTLDKIQIKNSGIGATGVSALAKVIQ---NVTYLDLSKSIIGTKGAKAI-AKVIENCC 178

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           KL  L I + +I   G   +A+ +    +L  +++    I DEG  K+A ++ +++++  
Sbjct: 179 KLKYLRIDHCNIDVFGVRDIAQALSKNTNLEELSVACAGIDDEGMCKLARSVGKHKSLQV 238

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           + +  NNI  KG  AI     ++  +  L    +PI
Sbjct: 239 LTITHNNISEKGKRAIIEACAESQSLNHLFHEIDPI 274



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 7/254 (2%)

Query: 139 LSGFTGKLFRESKQTLNEFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS      +       +E AK L    + ++V ++G   GD G+  +AE+L  N T   +
Sbjct: 15  LSAIHINFYSSGDACASELAKVLVDNTSLNAVYIAGAYLGDAGVASIAEALMVNTTVRAL 74

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
                 +T    +A   +L+ N  +  L+L    IGD G  C+   L  N  ++++Q+ +
Sbjct: 75  GIRGENMTPEAGRALGEMLKHNTTITCLSLIQGNIGDSGALCIASGLSQNTTLDKIQIKN 134

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +   G  A+A++++N   +  L+L+ ++I   G  ++A+ +     ++ L ++     
Sbjct: 135 SGIGATGVSALAKVIQN---VTYLDLSKSIIGTKGAKAIAKVIENCCKLKYLRIDHCNID 191

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G   +A+ L  N +L EL +    I DEG+  L   +   K  L VL I +N+IS KG
Sbjct: 192 VFGVRDIAQALSKNTNLEELSVACAGIDDEGMCKLARSVGKHK-SLQVLTITHNNISEKG 250

Query: 376 AFHVAEYIKNCKSL 389
              + E     +SL
Sbjct: 251 KRAIIEACAESQSL 264



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 4/254 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S++ ++  + GD     LA+ L  N +   V  A   +  AG+ +    L  N  ++ L
Sbjct: 15  LSAIHINFYSSGDACASELAKVLVDNTSLNAVYIAGAYLGDAGVASIAEALMVNTTVRAL 74

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            + G  +  E  + L ++L  N  +  L L   ++ D GA  IA  L  N+ L  +++ N
Sbjct: 75  GIRGENMTPEAGRALGEMLKHNTTITCLSLIQGNIGDSGALCIASGLSQNTTLDKIQIKN 134

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           + I  +G ++LA+ +++N T   L L+ +  G  GA A+AK +E    L+ L +   +I 
Sbjct: 135 SGIGATGVSALAK-VIQNVTY--LDLSKSIIGTKGAKAIAKVIENCCKLKYLRIDHCNID 191

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             G+R +   L S+   L  L +    I  +G   +A  +   KSL  + +  N+I ++G
Sbjct: 192 VFGVRDIAQAL-SKNTNLEELSVACAGIDDEGMCKLARSVGKHKSLQVLTITHNNISEKG 250

Query: 404 AEKIADALKQNRTI 417
              I +A  +++++
Sbjct: 251 KRAIIEACAESQSL 264



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 6/166 (3%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           S + IN Y +  GD  A ++A  L  N ++  + + G  +   G ++IA  L  N+ + +
Sbjct: 16  SAIHINFYSS--GDACASELAKVLVDNTSLNAVYIAGAYLGDAGVASIAEALMVNTTVRA 73

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L +    +  +  +AL E+LK +  I  L L    IG SGA  +A  L  N T+  + ++
Sbjct: 74  LGIRGENMTPEAGRALGEMLKHNTTITCLSLIQGNIGDSGALCIASGLSQNTTLDKIQIK 133

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            +G+   G   LA+    V + +T +DL+ + I   GA AIA+ ++
Sbjct: 134 NSGIGATGVSALAK----VIQNVTYLDLSKSIIGTKGAKAIAKVIE 175



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 12/172 (6%)

Query: 410 ALKQNRTITTIDLGGNNIHSKG---ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           +LK N T++ I +   N +S G   AS +A+VL DN+ + ++ +A   +G  G  +++E 
Sbjct: 8   SLKNNSTLSAIHI---NFYSSGDACASELAKVLVDNTSLNAVYIAGAYLGDAGVASIAEA 64

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
           L  +  +  L +    +       + +ML++N TI+ L L    + D GA C+A      
Sbjct: 65  LMVNTTVRALGIRGENMTPEAGRALGEMLKHNTTITCLSLIQGNIGDSGALCIASGLS-Q 123

Query: 527 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           N  L  I +  + I   G  A+A+ ++      VT L+L+ + +   G  A+
Sbjct: 124 NTTLDKIQIKNSGIGATGVSALAKVIQ-----NVTYLDLSKSIIGTKGAKAI 170


>gi|405952971|gb|EKC20714.1| NACHT, LRR and PYD domains-containing protein 5 [Crassostrea gigas]
          Length = 740

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 156/309 (50%), Gaps = 3/309 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +SG +  ++    L++ +       E+      ++   +      +Q +  L  L+L  N
Sbjct: 416 ISGHSLHEDRAKALSKVVSKYNCILELRIGKTQLSGRDVGHLSHAIQVSACLAVLDLRLN 475

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG+EG + L   L  N+ + +L +SS  +  EG K +++ LK N+ +  ++++   I  
Sbjct: 476 SIGNEGARLLAVSLAKNSHIRQLNISSTGIDHEGCKNLSDALKLNNTITEIDMSFLEIGD 535

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           SG   L   L +N +I  L L  +    +G   L +G++ ++SL  L L  N IGD G+ 
Sbjct: 536 SGCICLGNMLKQNKSISKLRLRSSGISWIGCGILFEGVQQSRSLTVLDLSRNFIGDNGME 595

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            +   L+  K  L  L++ N  I++ G   +++ + + K+L  ++L +N I D G  K++
Sbjct: 596 MMCRHLNE-KCSLVELNLENCGITSSGCAMLSDVVLSNKTLTNLDLSVNFIADAGVTKLS 654

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK--ALSEV 466
            AL++N++I T+ L    I + G S +  VL+ N  +T L L YN +G + +   A S+ 
Sbjct: 655 AALERNKSIKTLGLNMCGITNDGFSKMLDVLECNPTMTLLKLCYNRLGKEHSNPTATSDD 714

Query: 467 LKFHGNINT 475
           LK+   I T
Sbjct: 715 LKYRVRIVT 723



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 168/355 (47%), Gaps = 13/355 (3%)

Query: 170 SGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL--SG 227
           S + F  + LFF        + A  +S+ +  +++ G ++ D  +  N     +N+  SG
Sbjct: 369 SSKRFSRDSLFF--------KRASRLSYMS--VSSDGGRSSDDSVLINHGTPVINICISG 418

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           + + ++  K L  ++     +  L++    L       ++  ++ ++ L VL+L  N I 
Sbjct: 419 HSLHEDRAKALSKVVSKYNCILELRIGKTQLSGRDVGHLSHAIQVSACLAVLDLRLNSIG 478

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
             G   LA +L +NS IR L+++       G   L+  L+ N ++ E+ +    IGD G 
Sbjct: 479 NEGARLLAVSLAKNSHIRQLNISSTGIDHEGCKNLSDALKLNNTITEIDMSFLEIGDSGC 538

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
             L + L   K  ++ L + ++ IS  G   + E ++  +SL  ++L  N IGD G E +
Sbjct: 539 ICLGNMLKQNKS-ISKLRLRSSGISWIGCGILFEGVQQSRSLTVLDLSRNFIGDNGMEMM 597

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
              L +  ++  ++L    I S G + ++ V+  N  +T+LDL+ N I   G   LS  L
Sbjct: 598 CRHLNEKCSLVELNLENCGITSSGCAMLSDVVLSNKTLTNLDLSVNFIADAGVTKLSAAL 657

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           + + +I TL L  C I   G   + D+L  N T+++L L  N L  E +   A S
Sbjct: 658 ERNKSIKTLGLNMCGITNDGFSKMLDVLECNPTMTLLKLCYNRLGKEHSNPTATS 712



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 130/272 (47%), Gaps = 30/272 (11%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           + G+S+ ++  +AL S + S+   +  L IG   +S +   H++  I+    L  ++L +
Sbjct: 416 ISGHSLHEDRAKAL-SKVVSKYNCILELRIGKTQLSGRDVGHLSHAIQVSACLAVLDLRL 474

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IG+EGA  +A +L +N  I  +++    I  +G   ++  LK N+ IT +D+++  IG
Sbjct: 475 NSIGNEGARLLAVSLAKNSHIRQLNISSTGIDHEGCKNLSDALKLNNTITEIDMSFLEIG 534

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G   L  +LK + +I+ L+L    I   G   + + ++ + ++++LDL  N + D G 
Sbjct: 535 DSGCICLGNMLKQNKSISKLRLRSSGISWIGCGILFEGVQQSRSLTVLDLSRNFIGDNGM 594

Query: 517 KCLAQSFK---------------------------VVNEALTSIDLAFNEIRDDGAFAIA 549
           + + +                              + N+ LT++DL+ N I D G   ++
Sbjct: 595 EMMCRHLNEKCSLVELNLENCGITSSGCAMLSDVVLSNKTLTNLDLSVNFIADAGVTKLS 654

Query: 550 QALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            AL+ N+ +    LN+    +T  G S + D 
Sbjct: 655 AALERNKSIKTLGLNMCG--ITNDGFSKMLDV 684



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 3/259 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +D+   + G+EG   LA SL  N    +++ ++ GI   G K     L+ N  +  
Sbjct: 466 CLAVLDLRLNSIGNEGARLLAVSLAKNSHIRQLNISSTGIDHEGCKNLSDALKLNNTITE 525

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           +++S   IGD G  CL ++L  N  + +L+L S  +   G   + E ++ +  L VL+L+
Sbjct: 526 IDMSFLEIGDSGCICLGNMLKQNKSISKLRLRSSGISWIGCGILFEGVQQSRSLTVLDLS 585

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G   +   L E  ++  L+L      + G   L+  +  NK+L  L L  N I
Sbjct: 586 RNFIGDNGMEMMCRHLNEKCSLVELNLENCGITSSGCAMLSDVVLSNKTLTNLDLSVNFI 645

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            D G+  L + L  R   +  L +    I+  G   + + ++   ++  + L  N +G E
Sbjct: 646 ADAGVTKLSAAL-ERNKSIKTLGLNMCGITNDGFSKMLDVLECNPTMTLLKLCYNRLGKE 704

Query: 403 GAEKIA--DALKQNRTITT 419
            +   A  D LK    I T
Sbjct: 705 HSNPTATSDDLKYRVRIVT 723


>gi|395544764|ref|XP_003774277.1| PREDICTED: ribonuclease inhibitor [Sarcophilus harrisii]
          Length = 326

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 130/254 (51%), Gaps = 7/254 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + ++     D G+  +  SL       +++S     IT A  K    +L++   L 
Sbjct: 52  SLTELSLANNELRDSGVQMVLSSLQTPTCKIQKLSLQNCNITGASCKMIPALLRTKSTLT 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L LS N +GDEGVK LC+ L+D    ++RL+L   +      +A++ +LK  + L+ L 
Sbjct: 112 DLQLSDNHLGDEGVKLLCEGLMDPKCNLQRLELEYCEFTAASCEALSSVLKTKNSLQELT 171

Query: 281 LNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA--LAKGLEGNKSLRELHL 337
           LNNN +  +G   L + L++ N  ++ L L G   G   AN   L+  L+  +SL EL L
Sbjct: 172 LNNNELGEAGVLLLCQGLMDPNCNLQVLKLEG--CGVTPANCRNLSTVLQTKESLEELCL 229

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             N IGD G+  L  G+ S   +L +L +    I+A+G   +A+ +K    L  ++L  N
Sbjct: 230 GENKIGDAGLAQLCQGILSPTCRLKILWLWECDITAEGCRALAQVLKGKACLKKLSLICN 289

Query: 398 DIGDEGAEKIADAL 411
            +GD+GAE +  AL
Sbjct: 290 QLGDQGAELLCQAL 303



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 3/270 (1%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDILVDNAGVERLQLSSVDLR 259
           G+T A       VLQ N++L  L+L+ N + D GV+  L  +      +++L L + ++ 
Sbjct: 34  GLTDAMCAKISSVLQDNLSLTELSLANNELRDSGVQMVLSSLQTPTCKIQKLSLQNCNIT 93

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALG 318
               K I  LL+  S L  L+L++N +   G   L E L++    ++ L L      A  
Sbjct: 94  GASCKMIPALLRTKSTLTDLQLSDNHLGDEGVKLLCEGLMDPKCNLQRLELEYCEFTAAS 153

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             AL+  L+   SL+EL L+ N +G+ G+  L  GL      L VL +    ++     +
Sbjct: 154 CEALSSVLKTKNSLQELTLNNNELGEAGVLLLCQGLMDPNCNLQVLKLEGCGVTPANCRN 213

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIAR 437
           ++  ++  +SL  + L  N IGD G  ++    L     +  + L   +I ++G  A+A+
Sbjct: 214 LSTVLQTKESLEELCLGENKIGDAGLAQLCQGILSPTCRLKILWLWECDITAEGCRALAQ 273

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           VLK  + +  L L  N +G  GA+ L + L
Sbjct: 274 VLKGKACLKKLSLICNQLGDQGAELLCQAL 303



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 4/258 (1%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N SL EL L  N + D G++ ++S L +   K+  L + N +I+      +   ++ 
Sbjct: 47  LQDNLSLTELSLANNELRDSGVQMVLSSLQTPTCKIQKLSLQNCNITGASCKMIPALLRT 106

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSV 444
             +L  + L  N +GDEG + + + L   +  +  ++L      +    A++ VLK  + 
Sbjct: 107 KSTLTDLQLSDNHLGDEGVKLLCEGLMDPKCNLQRLELEYCEFTAASCEALSSVLKTKNS 166

Query: 445 ITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           +  L L  N +G  G   L + ++  + N+  LKL  C +  +    ++ +L+   ++  
Sbjct: 167 LQELTLNNNELGEAGVLLLCQGLMDPNCNLQVLKLEGCGVTPANCRNLSTVLQTKESLEE 226

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           L L  N + D G   L Q        L  + L   +I  +G  A+AQ LK      +  L
Sbjct: 227 LCLGENKIGDAGLAQLCQGILSPTCRLKILWLWECDITAEGCRALAQVLKGK--ACLKKL 284

Query: 564 NLANNFLTKFGQSALTDA 581
           +L  N L   G   L  A
Sbjct: 285 SLICNQLGDQGAELLCQA 302



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 122/306 (39%), Gaps = 34/306 (11%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHL 309
           ++L    L D     I+ +L++N  L  L L NN +  SG   +  +L      I+ L L
Sbjct: 28  IRLDDCGLTDAMCAKISSVLQDNLSLTELSLANNELRDSGVQMVLSSLQTPTCKIQKLSL 87

Query: 310 -NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            N N  GA     +   L    +L +L L  N +GDEG++ L  GL   K  L  L++  
Sbjct: 88  QNCNITGA-SCKMIPALLRTKSTLTDLQLSDNHLGDEGVKLLCEGLMDPKCNLQRLELEY 146

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNI 427
              +A     ++  +K   SL  + L  N++G+ G   +   L   N  +  + L G  +
Sbjct: 147 CEFTAASCEALSSVLKTKNSLQELTLNNNELGEAGVLLLCQGLMDPNCNLQVLKLEGCGV 206

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGAS 486
                  ++ VL+    +  L L  N IG  G   L + +L     +  L L  C I A 
Sbjct: 207 TPANCRNLSTVLQTKESLEELCLGENKIGDAGLAQLCQGILSPTCRLKILWLWECDITAE 266

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
           G   +A +L+                  G  CL +           + L  N++ D GA 
Sbjct: 267 GCRALAQVLK------------------GKACLKK-----------LSLICNQLGDQGAE 297

Query: 547 AIAQAL 552
            + QAL
Sbjct: 298 LLCQAL 303



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 2/153 (1%)

Query: 150 SKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIK 208
           S + L+   K   +   + ++    G+ G+  L + L   N   + +     G+T A  +
Sbjct: 153 SCEALSSVLKTKNSLQELTLNNNELGEAGVLLLCQGLMDPNCNLQVLKLEGCGVTPANCR 212

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIA 267
               VLQ+  +L+ L L  N IGD G+  LC  IL     ++ L L   D+  EG +A+A
Sbjct: 213 NLSTVLQTKESLEELCLGENKIGDAGLAQLCQGILSPTCRLKILWLWECDITAEGCRALA 272

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
           ++LK  + L+ L L  N +   G   L +ALL+
Sbjct: 273 QVLKGKACLKKLSLICNQLGDQGAELLCQALLD 305


>gi|397506582|ref|XP_003823805.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC5 [Pan paniscus]
          Length = 1865

 Score =  107 bits (267), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 162/346 (46%), Gaps = 14/346 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG K +   L+   +L+ L+
Sbjct: 1496 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKVLMRALEGKWMLKRLD 1555

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L   + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1556 LSHLLLNSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1615

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1616 QIGDAGVQHLATILPGLP-ELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1674

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1675 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 1730

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE A 
Sbjct: 1731 -----VLRFCKELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAA 1785

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
             LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1786 ELAQVLPQMGR-LKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRL 1830



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 86/326 (26%), Positives = 139/326 (42%), Gaps = 31/326 (9%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
               +D+S   F +EG   L  +L      + +  +   + ++ +      L     L++L
Sbjct: 1523 LEELDLSNNQFDEEGTKVLMRALEGKWMLKRLDLSHLLLNSSTLALLTHRLSHMTCLQSL 1582

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
             L+ N IGD G   L + L     +E L LS   + D G + +A +L     LR ++L+ 
Sbjct: 1583 RLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDLSV 1642

Query: 284  NMIDYSGFTSLAEAL---------------LENST-----------IRSLHLNGNYGGAL 317
            N I  +G   LAE+L               L + T           +R LHL  ++ G  
Sbjct: 1643 NSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQHLRVLHLPFSHLGPG 1702

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            GA +LA+ L+G+  L E+ L  N++    +R            L  +D+ +  I  + A 
Sbjct: 1703 GALSLAQALDGSPHLEEISLAENNLAGGVLR-----FCKELPLLRQIDLVSCKIDNQTAK 1757

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
             +     +C +L  I L  N +GDE A ++A  L Q   +  +DL  N I + GA  +A 
Sbjct: 1758 LLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDLEKNQITALGAWLLAE 1817

Query: 438  VLKDNSVITSLDLAYNPIGADGAKAL 463
             L   S I  + L  NPI  D  + L
Sbjct: 1818 GLAQGSSIQVIRLWNNPIPCDMVQHL 1843



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 5/216 (2%)

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL    +
Sbjct: 1502 SSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKVLMRALEGKWMLKRLDLSHLLL 1561

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG +G
Sbjct: 1562 NSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAG 1621

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
             + +A +L     +  +DL  N +   G   LA+S  V+   L  + L  N + D  A  
Sbjct: 1622 VQHLATILPGLPELRKIDLSVNSISSAGGVQLAESL-VLCRRLEELMLGCNALGDPTALG 1680

Query: 548  IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            +AQ L  +  V    L+L  + L   G  +L  A D
Sbjct: 1681 LAQELPQHLRV----LHLPFSHLGPGGALSLAQALD 1712



 Score = 51.6 bits (122), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 28/252 (11%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L G   +  L       GD    AL   L +  G+L +L +  + I+A+G  H+ + +
Sbjct: 680 EALVGCGQIENLSFKSRKCGDTFAEALSRSLPTM-GRLQMLGLAGSKITARGISHLVKAL 738

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV----- 438
             C  L  ++   N + D+    I + L     +  +DL  N+I       +ARV     
Sbjct: 739 PLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSNNSICVSTLLCLARVAVTCP 798

Query: 439 --------------LKDNSVITSLDLAYNP--IGADGAKALSEVLKFHGNINTLKLGWCQ 482
                         L      T+ +L   P    +DG +  ++         TL+L  CQ
Sbjct: 799 TVRMLQAREADLIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSL-----TLRLQKCQ 853

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +    AE +  +L+    +  +DL  N L DEG + +A++   ++ A   +DL+ N +  
Sbjct: 854 LQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIA-RKLDLSDNGLSV 912

Query: 543 DGAFAIAQALKA 554
            G   + +A+ A
Sbjct: 913 AGVHCVLRAVSA 924



 Score = 49.7 bits (117), Expect = 0.005,   Method: Composition-based stats.
 Identities = 105/464 (22%), Positives = 178/464 (38%), Gaps = 71/464 (15%)

Query: 189  NQTAEEV--SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
            NQ  E V   F    ++   I++F  +L     L  ++LS N +GD G++CL + L    
Sbjct: 1211 NQEEEGVCCGFTGCSLSQEHIESFCWLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVP 1270

Query: 247  GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
                L LS   +  E A  + E L   S  RV E + N+     F        E+   ++
Sbjct: 1271 ISGLLDLSHNSVSQESALYLVETLP--SCPRVREASVNLGSEQSFR--IHFSREDQAGKT 1326

Query: 307  LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS------GLSS---- 356
            L L+         + LA GL  +  L EL L    +G + +  L+S      GL S    
Sbjct: 1327 LRLSECSFRPEHVSRLATGLSQSLQLTELTLTQCCLGQKQLAILLSLVGRPAGLFSLRVQ 1386

Query: 357  -----RKGKLAVLDIGNN--------SISAK----------------------------- 374
                 R G L++L++           SIS                               
Sbjct: 1387 EPWADRAGVLSLLEVCAQASGSVTEISISKTQQQLCVQLEFPRQEENPEAVALRLAHCDL 1446

Query: 375  GAFH---VAEYIKNCK-----SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
            GA H   V + ++ C      SL  +NL  +D  D  +  +   L     + T  L  + 
Sbjct: 1447 GAHHSLLVGQLMETCARLQQLSLSQVNLCEDD--DASSLLLQSLLLSLSELKTFRLTSSC 1504

Query: 427  IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
            + ++G + +A  L     +  LDL+ N    +G K L   L+    +  L L    + +S
Sbjct: 1505 VSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKVLMRALEGKWMLKRLDLSHLLLNSS 1564

Query: 487  GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
                +   L +   +  L L  N + D G   L+++ +    +L  +DL+ N+I D G  
Sbjct: 1565 TLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAAT-SLEELDLSHNQIGDAGVQ 1623

Query: 547  AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
             +A  L    +  +  ++L+ N ++  G   L ++  L   + E
Sbjct: 1624 HLATILPGLPE--LRKIDLSVNSISSAGGVQLAESLVLCRRLEE 1665



 Score = 43.9 bits (102), Expect = 0.22,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 87/224 (38%), Gaps = 19/224 (8%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G      G+  L ++L      +EVSF  N ++   +     VL     L+ L+LS N
Sbjct: 721 LAGSKITARGISHLVKALPLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSNN 780

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNM 285
            I    + CL  + V    V  LQ    DL        +  AEL       R  +L  + 
Sbjct: 781 SICVSTLLCLARVAVTCPTVRMLQAREADLIFLLSPPTETTAELQ------RAPDLQESD 834

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G  S +  L        +H          A AL   L+    L E+ L GN + DE
Sbjct: 835 GQRKGAQSRSLTLRLQKCQLQVH---------DAEALIALLQEGPHLEEVDLSGNQLEDE 885

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           G R LM+  +S+      LD+ +N +S  G   V   +  C +L
Sbjct: 886 GCR-LMAEAASQLHIARKLDLSDNGLSVAGVHCVLRAVSACWTL 928


>gi|410915906|ref|XP_003971428.1| PREDICTED: ribonuclease inhibitor-like [Takifugu rubripes]
          Length = 504

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 201/458 (43%), Gaps = 69/458 (15%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSN-IALKTLN 224
           +DMS RN  D G+  L + L       E +S     ++     + D VL SN   L+ L+
Sbjct: 17  LDMSERNNQDSGVKVLWDFLKDPLCKLENISLNRCCLSKVSCDSLDSVLSSNPYHLRFLD 76

Query: 225 LSGNPIGDEGVKCLCDIL------------------------------------------ 242
           LS N + D GVK L   L                                          
Sbjct: 77  LSENILQDSGVKQLSHFLQNPLCKLETLSLRHCRLSKLSCGSLAKALNSNPSNLRVLDLG 136

Query: 243 ---VDNAGVERLQ--------------LSSVDLRDEGAKAIAELLKNN-SILRVLELNNN 284
              + N+GV+RL+              LS   +       +A  LK+N S L+VL+L+ N
Sbjct: 137 QNFLQNSGVKRLRSFLLNPLCKLETLSLSRCRISVNSCDFLASALKSNPSYLKVLDLSQN 196

Query: 285 MIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSI 342
           ++  SG   L++ LL     + +L LN      L   +LA  L+ N S LR L L  N +
Sbjct: 197 LLQDSGVRLLSDFLLNPLCKLETLRLNDCRLSELSCRSLALVLKSNTSQLRVLDLSWNEL 256

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGD 401
            D G++ L SGL S   KL  L + N  IS      +A  +K+ +SLL  ++L  N + D
Sbjct: 257 IDLGVKLLCSGLESPNCKLETLRLKNCYISKISCGSLAPTLKSSRSLLRELDLSGNSLMD 316

Query: 402 EGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYNPIGADG 459
            G + +  AL+  N  + ++ L    + S    ++A VLK N S++  L+L+ N +   G
Sbjct: 317 SGVKLLCSALESPNCNLESLSLRYCRLTSVSCESLASVLKSNTSLLRELNLSENSLHDSG 376

Query: 460 AKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYN-NTISILDLRANGLRDEGAK 517
            K L   L+  + ++  L L  C++     +++A +L+ N +++  LDL  N LRD G K
Sbjct: 377 VKLLCSGLESPNCHLEILGLVDCRLSEFSCDWLASVLKSNPSSLRELDLSWNELRDSGVK 436

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            L+      N  L ++ L    +      A+A ALK+N
Sbjct: 437 LLSSGLASPNCKLETLSLTDCSLSQSSCDALASALKSN 474



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 125/285 (43%), Gaps = 36/285 (12%)

Query: 167 VDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL-KTLN 224
           +D+S     D G+  L   L   N   E +      I+     +    L+S+ +L + L+
Sbjct: 249 LDLSWNELIDLGVKLLCSGLESPNCKLETLRLKNCYISKISCGSLAPTLKSSRSLLRELD 308

Query: 225 LSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELN 282
           LSGN + D GVK LC  L   N  +E L L    L     +++A +LK+N S+LR L L+
Sbjct: 309 LSGNSLMDSGVKLLCSALESPNCNLESLSLRYCRLTSVSCESLASVLKSNTSLLRELNLS 368

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN-KSLRELHLHGN 340
            N +  SG   L   L   N  +  L L          + LA  L+ N  SLREL L  N
Sbjct: 369 ENSLHDSGVKLLCSGLESPNCHLEILGLVDCRLSEFSCDWLASVLKSNPSSLRELDLSWN 428

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            + D G++ L SGL+S   KL  L + + S+S                            
Sbjct: 429 ELRDSGVKLLSSGLASPNCKLETLSLTDCSLS---------------------------- 460

Query: 401 DEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSV 444
               + +A ALK N   +  +DL  NN+H  GA+ ++ +L+  S+
Sbjct: 461 QSSCDALASALKSNPYHLRELDLMWNNLHESGAN-LSHLLQRESI 504



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 161/392 (41%), Gaps = 66/392 (16%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSI-LR 277
           L+ L++S     D GVK L D L D    +E + L+   L      ++  +L +N   LR
Sbjct: 14  LRQLDMSERNNQDSGVKVLWDFLKDPLCKLENISLNRCCLSKVSCDSLDSVLSSNPYHLR 73

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            L+L+ N++  SG   L+  L                     N L K LE   SLR   L
Sbjct: 74  FLDLSENILQDSGVKQLSHFL--------------------QNPLCK-LE-TLSLRHCRL 111

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN--CKSLLWINLY 395
              S G     +L   L+S    L VLD+G N +   G   +  ++ N  CK L  ++L 
Sbjct: 112 SKLSCG-----SLAKALNSNPSNLRVLDLGQNFLQNSGVKRLRSFLLNPLCK-LETLSLS 165

Query: 396 MNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKG----------------------- 431
              I     + +A ALK N + +  +DL  N +   G                       
Sbjct: 166 RCRISVNSCDFLASALKSNPSYLKVLDLSQNLLQDSGVRLLSDFLLNPLCKLETLRLNDC 225

Query: 432 ------ASAIARVLKDN-SVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQI 483
                   ++A VLK N S +  LDL++N +   G K L   L+  +  + TL+L  C I
Sbjct: 226 RLSELSCRSLALVLKSNTSQLRVLDLSWNELIDLGVKLLCSGLESPNCKLETLRLKNCYI 285

Query: 484 GASGAEFVADMLRYNNT-ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
                  +A  L+ + + +  LDL  N L D G K L  + +  N  L S+ L +  +  
Sbjct: 286 SKISCGSLAPTLKSSRSLLRELDLSGNSLMDSGVKLLCSALESPNCNLESLSLRYCRLTS 345

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
               ++A  LK+N  + +  LNL+ N L   G
Sbjct: 346 VSCESLASVLKSNTSL-LRELNLSENSLHDSG 376


>gi|225436920|ref|XP_002275003.1| PREDICTED: RAN GTPase-activating protein 1 isoform 2 [Vitis
           vinifera]
 gi|225436922|ref|XP_002274973.1| PREDICTED: RAN GTPase-activating protein 1 isoform 1 [Vitis
           vinifera]
          Length = 541

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 141/275 (51%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I +E  + +C+++     +  LQ  
Sbjct: 220 LNLSNNALGEKGVRAFGALLKSQNNLEELYLMNDGISEEAARAVCELIPSTEKLRILQFH 279

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AI+E++K +  L     ++  +D  G  +LA+AL   + ++ L L  N  
Sbjct: 280 NNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLKKLDLRDNMF 339

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L   K L E++L   ++ DEG +A+ + L      L VL++  N I+ +
Sbjct: 340 GVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKESTPSLEVLEMAGNDITVE 399

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGAS 433
            A  +A  I   + L  ++L  N++ DEGA  I+ AL++ +  +T +DL  N+I   GA 
Sbjct: 400 AASTLAACIAAKQCLAKLSLAENELKDEGAILISKALEEGHNQLTEVDLNTNSIRRAGAR 459

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            +A+ +        L++  N I  +G   + ++ K
Sbjct: 460 FLAQTVASKPGFKLLNINGNFISDEGIDEVKDIFK 494



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 147/317 (46%), Gaps = 31/317 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  + +E A+A+ EL+ +   LR+L
Sbjct: 217 LKYLNLSNNALGEKGVRAFGALLKSQNNLEELYLMNDGISEEAARAVCELIPSTEKLRIL 276

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           + +NNM    G  +++E +  +  +     +     + G  ALAK L     L++L L  
Sbjct: 277 QFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLKKLDLRD 336

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E   AL   LS                    AF         K L  + L   ++
Sbjct: 337 NMFGVEAGVALSKALS--------------------AF---------KDLTEVYLSYLNL 367

Query: 400 GDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA+ IA+ALK++  ++  +++ GN+I  + AS +A  +     +  L LA N +  +
Sbjct: 368 EDEGAKAIANALKESTPSLEVLEMAGNDITVEAASTLAACIAAKQCLAKLSLAENELKDE 427

Query: 459 GAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           GA  +S+ L+  H  +  + L    I  +GA F+A  +       +L++  N + DEG  
Sbjct: 428 GAILISKALEEGHNQLTEVDLNTNSIRRAGARFLAQTVASKPGFKLLNINGNFISDEGID 487

Query: 518 CLAQSFKVVNEALTSID 534
            +   FK   + L  +D
Sbjct: 488 EVKDIFKNCPDVLGPLD 504



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 133/256 (51%), Gaps = 5/256 (1%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG   L+ L+L  N++G++G+RA  + L S +  L  L + N+ IS + A  V
Sbjct: 206 NIFSSALEGC-VLKYLNLSNNALGEKGVRAFGALLKS-QNNLEELYLMNDGISEEAARAV 263

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E I + + L  +  + N  GDEGA  I++ +K++  +         + S+G  A+A+ L
Sbjct: 264 CELIPSTEKLRILQFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKAL 323

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
              + +  LDL  N  G +   ALS+ L    ++  + L +  +   GA+ +A+ L+ + 
Sbjct: 324 GTCTRLKKLDLRDNMFGVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKEST 383

Query: 500 -TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++ +L++  N +  E A  LA       + L  + LA NE++D+GA  I++AL+   + 
Sbjct: 384 PSLEVLEMAGNDITVEAASTLAACI-AAKQCLAKLSLAENELKDEGAILISKALEEGHN- 441

Query: 559 AVTSLNLANNFLTKFG 574
            +T ++L  N + + G
Sbjct: 442 QLTEVDLNTNSIRRAG 457



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 4/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE   ++ L+L+ N  G  G  A    L+   +L EL+L  + I +E  RA+   + S +
Sbjct: 212 LEGCVLKYLNLSNNALGEKGVRAFGALLKSQNNLEELYLMNDGISEEAARAVCELIPSTE 271

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL +L   NN    +GA  ++E +K   +L         +  EG   +A AL     + 
Sbjct: 272 -KLRILQFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLK 330

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLK 477
            +DL  N    +   A+++ L     +T + L+Y  +  +GAKA++  LK    ++  L+
Sbjct: 331 KLDLRDNMFGVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKESTPSLEVLE 390

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I    A  +A  +     ++ L L  N L+DEGA  ++++ +  +  LT +DL  
Sbjct: 391 MAGNDITVEAASTLAACIAAKQCLAKLSLAENELKDEGAILISKALEEGHNQLTEVDLNT 450

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N IR  GA  +AQ + +     +  LN+  NF++  G   + D
Sbjct: 451 NSIRRAGARFLAQTVASKPGFKL--LNINGNFISDEGIDEVKD 491


>gi|326432833|gb|EGD78403.1| hypothetical protein PTSG_09099 [Salpingoeca sp. ATCC 50818]
          Length = 1133

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 117/183 (63%), Gaps = 3/183 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++ + + +G  GA+ +A+ALK N  +  ++L  N I ++G  A+A++LK N+ +TSLDL 
Sbjct: 47  VSFWRDRLGVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTSLDLK 106

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            + IG  GA AL+++LK +  + TL L    IG+ GA  +A ML++N T++ L L+++ +
Sbjct: 107 SSRIGPVGAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILKSSRI 166

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
              GA  LA++ +  N  +TS++L  N I + GA A+A+ LK N    +T+LN+++N +T
Sbjct: 167 GPVGAVALAKTLQ-HNTTITSLELYNNNIGNKGAVALAKMLKHN--TTMTTLNVSHNHIT 223

Query: 572 KFG 574
           + G
Sbjct: 224 EPG 226



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 112/185 (60%), Gaps = 1/185 (0%)

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           + +   GA  +AE +K+   L  +NL+ N IG+EG   +A  LK N T+T++DL  + I 
Sbjct: 52  DRLGVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTSLDLKSSRIG 111

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA A+A++LK N+ + +L L  N IG++GA AL+++LK +  + TL L   +IG  GA
Sbjct: 112 PVGAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILKSSRIGPVGA 171

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
             +A  L++N TI+ L+L  N + ++GA  LA+  K  N  +T+++++ N I + G   +
Sbjct: 172 VALAKTLQHNTTITSLELYNNNIGNKGAVALAKMLK-HNTTMTTLNVSHNHITEPGMVNV 230

Query: 549 AQALK 553
            + L+
Sbjct: 231 LKQLQ 235



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 120/228 (52%), Gaps = 3/228 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N   ++VSF  + +  +G KA    L+ N  L+ LNL  N IG+EG   L  +L  N  +
Sbjct: 41  NTGGDKVSFWRDRLGVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTL 100

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
             L L S  +   GA A+A++LK+N+ +  L L+NN I   G  +LA+ L  N+T+ +L 
Sbjct: 101 TSLDLKSSRIGPVGAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLI 160

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L  +  G +GA ALAK L+ N ++  L L+ N+IG++G  AL   L      +  L++ +
Sbjct: 161 LKSSRIGPVGAVALAKTLQHNTTITSLELYNNNIGNKGAVALAKML-KHNTTMTTLNVSH 219

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           N I+  G  +V + ++   +   I L+  +   E +  +A  L   RT
Sbjct: 220 NHITEPGMVNVLKQLQGMDAQAKIRLF--EFKLESSTSVARTLATLRT 265



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 97/173 (56%), Gaps = 1/173 (0%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA ALA+ L+ N  LR L+L  N IG+EG  AL   L      L  LD+ ++ I   
Sbjct: 55  GVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLK-HNTTLTSLDLKSSRIGPV 113

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ +K+  ++  + L  NDIG EGA  +A  LK N T+ T+ L  + I   GA A
Sbjct: 114 GAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILKSSRIGPVGAVA 173

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
           +A+ L+ N+ ITSL+L  N IG  GA AL+++LK +  + TL +    I   G
Sbjct: 174 LAKTLQHNTTITSLELYNNNIGNKGAVALAKMLKHNTTMTTLNVSHNHITEPG 226



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 93/181 (51%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G  G   LAE+L  N     ++   N I   G  A   +L+ N  L +L+L  + IG  
Sbjct: 54  LGVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTSLDLKSSRIGPV 113

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   L  +L  N  +  L L + D+  EGA A+A++LK+N+ +  L L ++ I   G  +
Sbjct: 114 GAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILKSSRIGPVGAVA 173

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+ L  N+TI SL L  N  G  GA ALAK L+ N ++  L++  N I + G+  ++  
Sbjct: 174 LAKTLQHNTTITSLELYNNNIGNKGAVALAKMLKHNTTMTTLNVSHNHITEPGMVNVLKQ 233

Query: 354 L 354
           L
Sbjct: 234 L 234



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 95/194 (48%)

Query: 135 GTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEE 194
           G + +S +  +L     + L E  K+      +++     G+EG   LA+ L +N T   
Sbjct: 43  GGDKVSFWRDRLGVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTS 102

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +   ++ I   G  A   +L+ N  + TL L  N IG EG   L  +L  N  +  L L 
Sbjct: 103 LDLKSSRIGPVGAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILK 162

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           S  +   GA A+A+ L++N+ +  LEL NN I   G  +LA+ L  N+T+ +L+++ N+ 
Sbjct: 163 SSRIGPVGAVALAKTLQHNTTITSLELYNNNIGNKGAVALAKMLKHNTTMTTLNVSHNHI 222

Query: 315 GALGANALAKGLEG 328
              G   + K L+G
Sbjct: 223 TEPGMVNVLKQLQG 236



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 5/160 (3%)

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           R + +N+    +    + +G  GAKAL+E LK +  +  L L    IG  G   +A ML+
Sbjct: 36  RAIANNTGGDKVSFWRDRLGVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLK 95

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           +N T++ LDL+++ +   GA  LA+  K  N  + ++ L  N+I  +GA A+A+ LK N 
Sbjct: 96  HNTTLTSLDLKSSRIGPVGAVALAKMLK-HNTTMATLILDNNDIGSEGAVALAKMLKHNT 154

Query: 557 DVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIF 596
            +A  +L L ++ +   G  AL  AK L +  +   + ++
Sbjct: 155 TMA--TLILKSSRIGPVGAVAL--AKTLQHNTTITSLELY 190


>gi|403305978|ref|XP_003943523.1| PREDICTED: protein NLRC5 [Saimiri boliviensis boliviensis]
          Length = 1874

 Score =  107 bits (266), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 94/343 (27%), Positives = 158/343 (46%), Gaps = 8/343 (2%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K   L+ + +   G+  L   L     +E L+ S+ +  + G K +   L+    L+ L+
Sbjct: 1505 KKFRLTSSRVSTAGLAHLASGLGRCHHLEELEWSNTEFDETGTKVLMRALEEKRTLKRLD 1564

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L   + ++SL LN N  G +    L+K L    SL EL L  N
Sbjct: 1565 LSHLLLNGSTLALLTRGLSHMTLLQSLRLNRNSIGDVDCRHLSKALRAATSLEELDLSHN 1624

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G+R L + L     +L  +D+  NSIS  G   +AE +  C+ L  + L  ND+G
Sbjct: 1625 QIGDAGVRYLATILPGLP-ELRKIDLSVNSISPAGGVKLAESLALCRRLEELMLGCNDLG 1683

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A ++A  L Q+  +  + L  +++   GA ++ + L  +  +  + LA N + A+G 
Sbjct: 1684 DRTALELARELPQH--LRVLHLPSSHLGPNGALSLVQALDGSPHVEEISLAENNL-AEGV 1740

Query: 461  KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
                + L     I+ +    C+I    A+ +         + ++ L  N L DE A  LA
Sbjct: 1741 LHFCKGLPLLRRIDLVS---CKIDNQTAKLLTPSFTLCPALEVILLSWNLLGDEAAAELA 1797

Query: 521  QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
            Q    +   L  +DL  N+I   GA+ +A+ L     V V  L
Sbjct: 1798 QVLPRMGR-LKRVDLEKNQITARGAWLLAEGLAQGSSVQVIRL 1839



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 82/305 (26%), Positives = 134/305 (43%), Gaps = 7/305 (2%)

Query: 159  KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
            +E R    +D+S        L  L   L +    + +    N I     +     L++  
Sbjct: 1555 EEKRTLKRLDLSHLLLNGSTLALLTRGLSHMTLLQSLRLNRNSIGDVDCRHLSKALRAAT 1614

Query: 219  ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            +L+ L+LS N IGD GV+ L  IL     + ++ LS   +   G   +AE L     L  
Sbjct: 1615 SLEELDLSHNQIGDAGVRYLATILPGLPELRKIDLSVNSISPAGGVKLAESLALCRRLEE 1674

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L L  N +       LA  L ++  +R LHL  ++ G  GA +L + L+G+  + E+ L 
Sbjct: 1675 LMLGCNDLGDRTALELARELPQH--LRVLHLPSSHLGPNGALSLVQALDGSPHVEEISLA 1732

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N++  EG+     GL      L  +D+ +  I  + A  +      C +L  I L  N 
Sbjct: 1733 ENNLA-EGVLHFCKGLP----LLRRIDLVSCKIDNQTAKLLTPSFTLCPALEVILLSWNL 1787

Query: 399  IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            +GDE A ++A  L +   +  +DL  N I ++GA  +A  L   S +  + L  N I  +
Sbjct: 1788 LGDEAAAELAQVLPRMGRLKRVDLEKNQITARGAWLLAEGLAQGSSVQVIRLWNNHIPCN 1847

Query: 459  GAKAL 463
             A+ L
Sbjct: 1848 MAQCL 1852



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 8/231 (3%)

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++ +S  G  H+A  +  C  L  +     +  + G + +  AL++ RT+  +DL    +
Sbjct: 1511 SSRVSTAGLAHLASGLGRCHHLEELEWSNTEFDETGTKVLMRALEEKRTLKRLDLSHLLL 1570

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +    + + R L   +++ SL L  N IG    + LS+ L+   ++  L L   QIG +G
Sbjct: 1571 NGSTLALLTRGLSHMTLLQSLRLNRNSIGDVDCRHLSKALRAATSLEELDLSHNQIGDAG 1630

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
              ++A +L     +  +DL  N +   G   LA+S  +    L  + L  N++ D  A  
Sbjct: 1631 VRYLATILPGLPELRKIDLSVNSISPAGGVKLAESLALCRR-LEELMLGCNDLGDRTALE 1689

Query: 548  IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD---LVYEMSEKEVNI 595
            +A+ L  +  V    L+L ++ L   G  +L  A D    V E+S  E N+
Sbjct: 1690 LARELPQHLRV----LHLPSSHLGPNGALSLVQALDGSPHVEEISLAENNL 1736



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 102/252 (40%), Gaps = 28/252 (11%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L G   +  L       GD    AL   L +  G+L +L +  + I+A+G  H+ + +
Sbjct: 688 EALVGCGQIENLSFKSRKCGDAFAEALSRSLPT-MGRLQMLGLAGSKITARGISHLVKAL 746

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI---------------- 427
             C  L  ++   N + D+    I + L     +  +DL GN+I                
Sbjct: 747 PLCPQLEEVSFQDNQLNDQVVLNIVEVLPYLPRLRKLDLSGNSICVSTLLCLTKVAVTCP 806

Query: 428 -----HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
                 ++ A  I  +         L  A +   +DG +  ++         TL+L  CQ
Sbjct: 807 TISMLQAREADLIFLLSPPMETTAELQRAPDLQESDGQRKEAQSRSL-----TLRLQKCQ 861

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +    AE +  +LR    +  +DL  N L DEG + +A++   ++     +DL+ N +  
Sbjct: 862 LQVHDAETLIALLREGPHLEEVDLSGNQLEDEGCQLMAEAVSQLH-ITKKLDLSDNGLSA 920

Query: 543 DGAFAIAQALKA 554
            G   + +A++A
Sbjct: 921 AGVHCVLRAVRA 932


>gi|5174617|ref|NP_006083.1| nucleotide-binding oligomerization domain-containing protein 1
           [Homo sapiens]
 gi|20137579|sp|Q9Y239.1|NOD1_HUMAN RecName: Full=Nucleotide-binding oligomerization domain-containing
           protein 1; AltName: Full=Caspase recruitment
           domain-containing protein 4
 gi|4731026|gb|AAD28350.1|AF113925_1 Nod1 [Homo sapiens]
 gi|4760400|gb|AAD29125.1|AF126484_1 CARD4 [Homo sapiens]
 gi|5478674|gb|AAD43922.1| NOD1 protein [Homo sapiens]
 gi|44211246|gb|AAS46897.1| unknown [Homo sapiens]
 gi|51105869|gb|EAL24453.1| caspase recruitment domain family, member 4 [Homo sapiens]
 gi|119614351|gb|EAW93945.1| caspase recruitment domain family, member 4, isoform CRA_b [Homo
           sapiens]
 gi|119614352|gb|EAW93946.1| caspase recruitment domain family, member 4, isoform CRA_b [Homo
           sapiens]
 gi|119614353|gb|EAW93947.1| caspase recruitment domain family, member 4, isoform CRA_b [Homo
           sapiens]
 gi|119614355|gb|EAW93949.1| caspase recruitment domain family, member 4, isoform CRA_b [Homo
           sapiens]
          Length = 953

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 116/209 (55%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           ++A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N I ++G  ++AR
Sbjct: 803 YLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQS 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I+ + L  N ++ E AK      +++
Sbjct: 923 NTGITEICLNGNLIKPEEAKVYEDEKRII 951



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++ TL L    I   G + +A  L+ N ++ IL L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL++N  +    LN
Sbjct: 895 -NQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLN 932



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L LS N I D GVK L + L     V  L L +  + D GA+ + ++L     L  L
Sbjct: 730 LTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G                    G Y        LA  ++ +KS+ E+ + G
Sbjct: 790 KLGKNKITSEG--------------------GKY--------LALAVKNSKSISEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GDEG +A    L +    L  L + +N IS +G   +A  ++   SL  + L  N++
Sbjct: 822 NQVGDEGAKAFAEALRNHPS-LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I +KG + +A  L+ N+ IT + L  N I  + 
Sbjct: 881 NDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVYED 946



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 81/153 (52%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +  + + +       EG  +LA ++  +++  EV    N +   G KAF   L+++ +
Sbjct: 782 ECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +E L L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 902 WLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 91/200 (45%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L+E L   +    +    N IT  G +    +L     L  L L  N
Sbjct: 735 LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKN 794

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG K L   + ++  +  + +    + DEGAKA AE L+N+  L  L L +N I  
Sbjct: 795 KITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGIST 854

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+ L L  N I  +G  
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTA 914

Query: 349 ALMSGLSSRKGKLAVLDIGN 368
            L   L S  G   +   GN
Sbjct: 915 QLADALQSNTGITEICLNGN 934



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T L L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L     ++
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLT 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG K LA + K  +++++ + +  N++ D+GA A A+AL+ +   ++T+
Sbjct: 788 HLKLGKNKITSEGGKYLALAVKN-SKSISEVGMWGNQVGDEGAKAFAEALRNHP--SLTT 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA+N ++  G  +L  A
Sbjct: 845 LSLASNGISTEGGKSLARA 863


>gi|25955661|gb|AAH40339.1| NOD1 protein [Homo sapiens]
          Length = 953

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 116/209 (55%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           ++A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N I ++G  ++AR
Sbjct: 803 YLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQS 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I+ + L  N ++ E AK      +++
Sbjct: 923 NTGITEICLNGNLIKPEEAKVYEDEKRII 951



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++ TL L    I   G + +A  L+ N ++ IL L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL++N  +    LN
Sbjct: 895 -NQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLN 932



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L LS N I D GVK L + L     V  L L +  + D GA+ + ++L     L  L
Sbjct: 730 LTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G                    G Y        LA  ++ +KS+ E+ + G
Sbjct: 790 KLGKNKITSEG--------------------GKY--------LALAVKNSKSISEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GDEG +A    L +    L  L + +N IS +G   +A  ++   SL  + L  N++
Sbjct: 822 NQVGDEGAKAFAEALRNHPS-LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I +KG + +A  L+ N+ IT + L  N I  + 
Sbjct: 881 NDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVYED 946



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 81/153 (52%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +  + + +       EG  +LA ++  +++  EV    N +   G KAF   L+++ +
Sbjct: 782 ECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L TL+L+ N I  EG K L   L  N  +E L L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 902 WLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 91/200 (45%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L+E L   +    +    N IT  G +    +L     L  L L  N
Sbjct: 735 LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKN 794

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG K L   + ++  +  + +    + DEGAKA AE L+N+  L  L L +N I  
Sbjct: 795 KITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGIST 854

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+ L L  N I  +G  
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTA 914

Query: 349 ALMSGLSSRKGKLAVLDIGN 368
            L   L S  G   +   GN
Sbjct: 915 QLADALQSNTGITEICLNGN 934



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T L L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L     ++
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLT 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG K LA + K  +++++ + +  N++ D+GA A A+AL+ +   ++T+
Sbjct: 788 HLKLGKNKITSEGGKYLALAVKN-SKSISEVGMWGNQVGDEGAKAFAEALRNHP--SLTT 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA+N ++  G  +L  A
Sbjct: 845 LSLASNGISTEGGKSLARA 863


>gi|406654338|gb|AFS49704.1| nucleotide-binding oligomerization domain-containing protein 1
           [Gallus gallus]
          Length = 951

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 123/230 (53%), Gaps = 5/230 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N+I D G++ L+   S    KLAV+ +  N I+  GA  + E +   + + ++ L
Sbjct: 706 LDLDNNNINDYGVKQLLPCFS----KLAVIRLSVNQITDHGAKILYEELSKYQIVSYLGL 761

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           Y N I D GA+ +A  +++  ++  + +G N I S+G   +A+ ++ ++ +  + +  N 
Sbjct: 762 YNNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQ 821

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G +GAKA ++ L+ H  +  + L +  I   G + +A+ L++N+++ I  L  N L DE
Sbjct: 822 VGDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIFWLTKNELDDE 881

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            A   A+  K +N+ L  + L  N+I   G   +++ALK N  +    LN
Sbjct: 882 AAMSFAEMLK-INKKLVHLWLIQNQITAKGVKYLSEALKENTAIKEVCLN 930



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 4/248 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+NN I+  G   L     + + IR   L+ N     GA  L + L   + +  L L+
Sbjct: 706 LDLDNNNINDYGVKQLLPCFSKLAVIR---LSVNQITDHGAKILYEELSKYQIVSYLGLY 762

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N I D G +  ++ L      L  + IG N I+++G   +A+ I+   ++  I ++ N 
Sbjct: 763 NNQITDIGAK-YVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQ 821

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +GDEGA+  ADAL+ +  +T + L  N I ++G  +IA  L+ N  +    L  N +  +
Sbjct: 822 VGDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIFWLTKNELDDE 881

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
            A + +E+LK +  +  L L   QI A G +++++ L+ N  I  + L  N +  E AK 
Sbjct: 882 AAMSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALKENTAIKEVCLNGNLISQEEAKA 941

Query: 519 LAQSFKVV 526
                +++
Sbjct: 942 FESEERII 949



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 97/201 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E   + +  S + +      D G  ++A+ +    + E V   AN IT+ G K   
Sbjct: 744 KILYEELSKYQIVSYLGLYNNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLA 803

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             +Q +  +  + + GN +GDEG K   D L ++  +  + L+   +  EG K+IAE L+
Sbjct: 804 QAIQKSTTMFEIGMWGNQVGDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQ 863

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           +N  +++  L  N +D     S AE L  N  +  L L  N   A G   L++ L+ N +
Sbjct: 864 HNDSVKIFWLTKNELDDEAAMSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALKENTA 923

Query: 332 LRELHLHGNSIGDEGIRALMS 352
           ++E+ L+GN I  E  +A  S
Sbjct: 924 IKEVCLNGNLISQEEAKAFES 944



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 4/204 (1%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           KQ L  F+K     + + +S     D G   L E L   Q    +    N IT  G K  
Sbjct: 719 KQLLPCFSK----LAVIRLSVNQITDHGAKILYEELSKYQIVSYLGLYNNQITDIGAKYV 774

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             +++   +L+ + +  N I  EG KCL   +  +  +  + +    + DEGAKA A+ L
Sbjct: 775 AKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQVGDEGAKAFADAL 834

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +N+  L  + L  N I   G  S+AEAL  N +++   L  N      A + A+ L+ NK
Sbjct: 835 RNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIFWLTKNELDDEAAMSFAEMLKINK 894

Query: 331 SLRELHLHGNSIGDEGIRALMSGL 354
            L  L L  N I  +G++ L   L
Sbjct: 895 KLVHLWLIQNQITAKGVKYLSEAL 918



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 31/219 (14%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK------- 440
           + +W+   +  + +  +EK+     +      I L   N +S   SAI+ V+        
Sbjct: 649 NFVWM---LRCLYETQSEKVGKLAAKRMHANYIKLTYCNAYSADCSAISFVVHHFQKHLA 705

Query: 441 ---DN---------------SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
              DN               S +  + L+ N I   GAK L E L  +  ++ L L   Q
Sbjct: 706 LDLDNNNINDYGVKQLLPCFSKLAVIRLSVNQITDHGAKILYEELSKYQIVSYLGLYNNQ 765

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           I   GA++VA ++   +++  + + AN +  EG KCLAQ+ +  +  +  I +  N++ D
Sbjct: 766 ITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQ-KSTTMFEIGMWGNQVGD 824

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           +GA A A AL+ +    +T+++LA N +T  G  ++ +A
Sbjct: 825 EGAKAFADALRNHP--RLTNVSLAFNGITTEGGKSIAEA 861


>gi|118086113|ref|XP_418777.2| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Gallus gallus]
          Length = 951

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 123/230 (53%), Gaps = 5/230 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N+I D G++ L+   S    KLAV+ +  N I+  GA  + E +   + + ++ L
Sbjct: 706 LDLDNNNINDYGVKQLLPCFS----KLAVIRLSVNQITDHGARILYEELSKYQIVSYLGL 761

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           Y N I D GA+ +A  +++  ++  + +G N I S+G   +A+ ++ ++ +  + +  N 
Sbjct: 762 YNNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQ 821

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G +GAKA ++ L+ H  +  + L +  I   G + +A+ L++N+++ I  L  N L DE
Sbjct: 822 VGDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIFWLTKNELDDE 881

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            A   A+  K +N+ L  + L  N+I   G   +++ALK N  +    LN
Sbjct: 882 AAMSFAEMLK-INKKLVHLWLIQNQITAKGVKYLSEALKENTAIKEVCLN 930



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 4/248 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+NN I+  G   L     + + IR   L+ N     GA  L + L   + +  L L+
Sbjct: 706 LDLDNNNINDYGVKQLLPCFSKLAVIR---LSVNQITDHGARILYEELSKYQIVSYLGLY 762

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N I D G +  ++ L      L  + IG N I+++G   +A+ I+   ++  I ++ N 
Sbjct: 763 NNQITDIGAK-YVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQ 821

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +GDEGA+  ADAL+ +  +T + L  N I ++G  +IA  L+ N  +    L  N +  +
Sbjct: 822 VGDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIFWLTKNELDDE 881

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
            A + +E+LK +  +  L L   QI A G +++++ L+ N  I  + L  N +  E AK 
Sbjct: 882 AAMSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALKENTAIKEVCLNGNLISQEEAKA 941

Query: 519 LAQSFKVV 526
                +++
Sbjct: 942 FESEERII 949



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 97/201 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E   + +  S + +      D G  ++A+ +    + E V   AN IT+ G K   
Sbjct: 744 RILYEELSKYQIVSYLGLYNNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLA 803

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             +Q +  +  + + GN +GDEG K   D L ++  +  + L+   +  EG K+IAE L+
Sbjct: 804 QAIQKSTTMFEIGMWGNQVGDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQ 863

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           +N  +++  L  N +D     S AE L  N  +  L L  N   A G   L++ L+ N +
Sbjct: 864 HNDSVKIFWLTKNELDDEAAMSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALKENTA 923

Query: 332 LRELHLHGNSIGDEGIRALMS 352
           ++E+ L+GN I  E  +A  S
Sbjct: 924 IKEVCLNGNLISQEEAKAFES 944



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 4/204 (1%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           KQ L  F+K     + + +S     D G   L E L   Q    +    N IT  G K  
Sbjct: 719 KQLLPCFSK----LAVIRLSVNQITDHGARILYEELSKYQIVSYLGLYNNQITDIGAKYV 774

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             +++   +L+ + +  N I  EG KCL   +  +  +  + +    + DEGAKA A+ L
Sbjct: 775 AKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQVGDEGAKAFADAL 834

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +N+  L  + L  N I   G  S+AEAL  N +++   L  N      A + A+ L+ NK
Sbjct: 835 RNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIFWLTKNELDDEAAMSFAEMLKINK 894

Query: 331 SLRELHLHGNSIGDEGIRALMSGL 354
            L  L L  N I  +G++ L   L
Sbjct: 895 KLVHLWLIQNQITAKGVKYLSEAL 918



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 28/203 (13%)

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK----------DN----------- 442
           +EK+     +      I L   N +S   SAI+ V+           DN           
Sbjct: 662 SEKVGKLAAKRMHANYIKLTYCNAYSADCSAISFVVHHFQKHLALDLDNNNINDYGVKQL 721

Query: 443 ----SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
               S +  + L+ N I   GA+ L E L  +  ++ L L   QI   GA++VA ++   
Sbjct: 722 LPCFSKLAVIRLSVNQITDHGARILYEELSKYQIVSYLGLYNNQITDIGAKYVAKLIEEC 781

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           +++  + + AN +  EG KCLAQ+ +  +  +  I +  N++ D+GA A A AL+ +   
Sbjct: 782 SSLEYVKIGANKITSEGGKCLAQAIQ-KSTTMFEIGMWGNQVGDEGAKAFADALRNHP-- 838

Query: 559 AVTSLNLANNFLTKFGQSALTDA 581
            +T+++LA N +T  G  ++ +A
Sbjct: 839 RLTNVSLAFNGITTEGGKSIAEA 861


>gi|156321262|ref|XP_001618237.1| hypothetical protein NEMVEDRAFT_v1g155247 [Nematostella vectensis]
 gi|156198145|gb|EDO26137.1| predicted protein [Nematostella vectensis]
          Length = 248

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 135/251 (53%), Gaps = 5/251 (1%)

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           TSL ++L  NST+ ++H++ N  G   A+ LAK LE N SL ++ + G  +GD G+ ++ 
Sbjct: 3   TSLFKSLKNNSTLSAIHIHFNSLGDACASELAKVLEVNTSLNDVFIGGEYLGDAGVASIA 62

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L      +  L I  ++++ +    + E  ++  ++  ++L+   IGD GA+ IA  L
Sbjct: 63  EALIVNT-TVRTLGIRGDNMTPEAGRALGEMFRHNTTITCLSLFHGKIGDSGAQGIASGL 121

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
            QN T+  I +    I + G SA+A+V+++    T LDL+ N IG  GAKA+++V++   
Sbjct: 122 SQNTTLEKIQIENAGIGATGVSALAKVIQN---ATHLDLSRNIIGTKGAKAIAKVIENSC 178

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALT 531
            +  L++  C I   G   +A  L  N  +  L +   G+ DEG   LA+S    N++L 
Sbjct: 179 KLKYLRIDRCNIDVLGVRDIAKALSKNTNLEELSVACAGIDDEGMCELARSV-AKNKSLQ 237

Query: 532 SIDLAFNEIRD 542
            + + +N I +
Sbjct: 238 VLTITYNNISE 248



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 116/274 (42%), Gaps = 32/274 (11%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           L +SL  N T   +    N +  A       VL+ N +L  + + G  +GD GV  + + 
Sbjct: 5   LFKSLKNNSTLSAIHIHFNSLGDACASELAKVLEVNTSLNDVFIGGEYLGDAGVASIAEA 64

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L+ N  V  L +   ++  E  +A+ E+ ++N+ +  L L +  I  SG   +A  L +N
Sbjct: 65  LIVNTTVRTLGIRGDNMTPEAGRALGEMFRHNTTITCLSLFHGKIGDSGAQGIASGLSQN 124

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           +T+  + +     GA G +ALAK ++        H                         
Sbjct: 125 TTLEKIQIENAGIGATGVSALAKVIQ-----NATH------------------------- 154

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             LD+  N I  KGA  +A+ I+N   L ++ +   +I   G   IA AL +N  +  + 
Sbjct: 155 --LDLSRNIIGTKGAKAIAKVIENSCKLKYLRIDRCNIDVLGVRDIAKALSKNTNLEELS 212

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           +    I  +G   +AR +  N  +  L + YN I
Sbjct: 213 VACAGIDDEGMCELARSVAKNKSLQVLTITYNNI 246



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 7/220 (3%)

Query: 156 EFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L   +S++   + G   GD G+  +AE+L  N T   +    + +T    +A   
Sbjct: 32  ELAKVLEVNTSLNDVFIGGEYLGDAGVASIAEALIVNTTVRTLGIRGDNMTPEAGRALGE 91

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           + + N  +  L+L    IGD G + +   L  N  +E++Q+ +  +   G  A+A++++N
Sbjct: 92  MFRHNTTITCLSLFHGKIGDSGAQGIASGLSQNTTLEKIQIENAGIGATGVSALAKVIQN 151

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            +    L+L+ N+I   G  ++A+ +  +  ++ L ++      LG   +AK L  N +L
Sbjct: 152 AT---HLDLSRNIIGTKGAKAIAKVIENSCKLKYLRIDRCNIDVLGVRDIAKALSKNTNL 208

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            EL +    I DEG+  L   ++  K  L VL I  N+IS
Sbjct: 209 EELSVACAGIDDEGMCELARSVAKNK-SLQVLTITYNNIS 247



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 4/171 (2%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +KN  +L  I+++ N +GD  A ++A  L+ N ++  + +GG  +   G ++IA  L  N
Sbjct: 9   LKNNSTLSAIHIHFNSLGDACASELAKVLEVNTSLNDVFIGGEYLGDAGVASIAEALIVN 68

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + + +L +  + +  +  +AL E+ + +  I  L L   +IG SGA+ +A  L  N T+ 
Sbjct: 69  TTVRTLGIRGDNMTPEAGRALGEMFRHNTTITCLSLFHGKIGDSGAQGIASGLSQNTTLE 128

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            + +   G+   G   LA   KV+  A T +DL+ N I   GA AIA+ ++
Sbjct: 129 KIQIENAGIGATGVSALA---KVIQNA-THLDLSRNIIGTKGAKAIAKVIE 175



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 113/238 (47%), Gaps = 4/238 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S++ +   + GD     LA+ L  N +  +V      +  AG+ +    L  N  ++TL
Sbjct: 15  LSAIHIHFNSLGDACASELAKVLEVNTSLNDVFIGGEYLGDAGVASIAEALIVNTTVRTL 74

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            + G+ +  E  + L ++   N  +  L L    + D GA+ IA  L  N+ L  +++ N
Sbjct: 75  GIRGDNMTPEAGRALGEMFRHNTTITCLSLFHGKIGDSGAQGIASGLSQNTTLEKIQIEN 134

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             I  +G ++LA+ +++N+T   L L+ N  G  GA A+AK +E +  L+ L +   +I 
Sbjct: 135 AGIGATGVSALAK-VIQNAT--HLDLSRNIIGTKGAKAIAKVIENSCKLKYLRIDRCNID 191

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
             G+R +   L S+   L  L +    I  +G   +A  +   KSL  + +  N+I +
Sbjct: 192 VLGVRDIAKAL-SKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYNNISE 248



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 37/240 (15%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +L K L+ N +L  +H+H NS+GD    A  S L+       VL++   + S    F   
Sbjct: 4   SLFKSLKNNSTLSAIHIHFNSLGD----ACASELAK------VLEV---NTSLNDVFIGG 50

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           EY+                GD G   IA+AL  N T+ T+ + G+N+  +   A+  + +
Sbjct: 51  EYL----------------GDAGVASIAEALIVNTTVRTLGIRGDNMTPEAGRALGEMFR 94

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ IT L L +  IG  GA+ ++  L  +  +  +++    IGA+G   +A +++    
Sbjct: 95  HNTTITCLSLFHGKIGDSGAQGIASGLSQNTTLEKIQIENAGIGATGVSALAKVIQ---N 151

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD--GAFAIAQALKANEDV 558
            + LDL  N +  +GAK +A   KV+  +     L  +    D  G   IA+AL  N ++
Sbjct: 152 ATHLDLSRNIIGTKGAKAIA---KVIENSCKLKYLRIDRCNIDVLGVRDIAKALSKNTNL 208



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 3/164 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+ + L E  +     + + +     GD G   +A  L  N T E++     GI A G+ 
Sbjct: 84  EAGRALGEMFRHNTTITCLSLFHGKIGDSGAQGIASGLSQNTTLEKIQIENAGIGATGVS 143

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   V+Q+      L+LS N IG +G K +  ++ ++  ++ L++   ++   G + IA+
Sbjct: 144 ALAKVIQN---ATHLDLSRNIIGTKGAKAIAKVIENSCKLKYLRIDRCNIDVLGVRDIAK 200

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N+ L  L +    ID  G   LA ++ +N +++ L +  N
Sbjct: 201 ALSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYN 244


>gi|403354784|gb|EJY76953.1| Leucine Rich Repeat family protein [Oxytricha trifallax]
          Length = 404

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 156/318 (49%), Gaps = 12/318 (3%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA-GVERLQLSSVDLRDEGAKAIAELLK 271
           V+Q N     LN S N + D+ +  +C  L + A  +E + L   ++ D GAKA+ +L+ 
Sbjct: 49  VIQGN---DKLNFS-NRVNDQTLIAICSTLENYAIYIEDIDLRFNEITDIGAKALGDLIC 104

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            +  L  L L  N I   G   LAE+L E ++++ L+LN N     GA  + + L  +  
Sbjct: 105 KSPRLLGLNLQGNRIKSEGAQYLAESLKECTSLQYLNLNLNKIKTNGAMMVTELLFTHDK 164

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN---NSISAKGAFHVAEYIKNCKS 388
           L  L+L  N I  +GI  ++S L+S    L  L+I N    +I    A H  +  +N   
Sbjct: 165 LLSLNLGNNKIDHDGIIGILSVLNSSNYTLEELNIDNPVYKTICQSVAIHFGKMFQNNVG 224

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD-NSVITS 447
           L  ++L  + + D+G   I + L +N T+  +DL  N I  KG  AIA+ LK  N  + S
Sbjct: 225 LQKLSLRKHKLRDDGVYIIMEHLLENNTLKILDLNSNEISFKGCDAIAKYLKSGNCSLES 284

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L LA N     GAKA+S+ L  + ++  L + +  I   G  F A  L +N+TI    + 
Sbjct: 285 LHLANNKCSDYGAKAISQALSQNKSLIHLDMTYNDIKDYGLTFFAQSLFHNSTIMSFKIF 344

Query: 508 ANGLRDEGAKCLAQSFKV 525
            N     G +CL   +K+
Sbjct: 345 GNHF---GQECLDLFYKL 359



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 155/321 (48%), Gaps = 10/321 (3%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGIT 203
           K   E+++  +     ++    ++ S R   D+ L  +  +L  Y    E++    N IT
Sbjct: 34  KYLEETQEENDSLEIVIQGNDKLNFSNR-VNDQTLIAICSTLENYAIYIEDIDLRFNEIT 92

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
             G KA   ++  +  L  LNL GN I  EG + L + L +   ++ L L+   ++  GA
Sbjct: 93  DIGAKALGDLICKSPRLLGLNLQGNRIKSEGAQYLAESLKECTSLQYLNLNLNKIKTNGA 152

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHL-NGNYGGALGANA 321
             + ELL  +  L  L L NN ID+ G   +   L   N T+  L++ N  Y     + A
Sbjct: 153 MMVTELLFTHDKLLSLNLGNNKIDHDGIIGILSVLNSSNYTLEELNIDNPVYKTICQSVA 212

Query: 322 L--AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           +   K  + N  L++L L  + + D+G+  +M  L      L +LD+ +N IS KG   +
Sbjct: 213 IHFGKMFQNNVGLQKLSLRKHKLRDDGVYIIMEHL-LENNTLKILDLNSNEISFKGCDAI 271

Query: 380 AEYIK--NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           A+Y+K  NC SL  ++L  N   D GA+ I+ AL QN+++  +D+  N+I   G +  A+
Sbjct: 272 AKYLKSGNC-SLESLHLANNKCSDYGAKAISQALSQNKSLIHLDMTYNDIKDYGLTFFAQ 330

Query: 438 VLKDNSVITSLDLAYNPIGAD 458
            L  NS I S  +  N  G +
Sbjct: 331 SLFHNSTIMSFKIFGNHFGQE 351



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 7/247 (2%)

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           + ++ L  N I D G +AL   L  +  +L  L++  N I ++GA ++AE +K C SL +
Sbjct: 81  IEDIDLRFNEITDIGAKAL-GDLICKSPRLLGLNLQGNRIKSEGAQYLAESLKECTSLQY 139

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD-NSVITSLDL 450
           +NL +N I   GA  + + L  +  + +++LG N I   G   I  VL   N  +  L++
Sbjct: 140 LNLNLNKIKTNGAMMVTELLFTHDKLLSLNLGNNKIDHDGIIGILSVLNSSNYTLEELNI 199

Query: 451 ---AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
               Y  I    A    ++ + +  +  L L   ++   G   + + L  NNT+ ILDL 
Sbjct: 200 DNPVYKTICQSVAIHFGKMFQNNVGLQKLSLRKHKLRDDGVYIIMEHLLENNTLKILDLN 259

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           +N +  +G   +A+  K  N +L S+ LA N+  D GA AI+QAL  N+  ++  L++  
Sbjct: 260 SNEISFKGCDAIAKYLKSGNCSLESLHLANNKCSDYGAKAISQALSQNK--SLIHLDMTY 317

Query: 568 NFLTKFG 574
           N +  +G
Sbjct: 318 NDIKDYG 324



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 132/268 (49%), Gaps = 14/268 (5%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           ++L   ++GN  L       N + D+ + A+ S L +    +  +D+  N I+  GA  +
Sbjct: 44  DSLEIVIQGNDKLN----FSNRVNDQTLIAICSTLENYAIYIEDIDLRFNEITDIGAKAL 99

Query: 380 AEYIKNCKS--LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            + I  CKS  LL +NL  N I  EGA+ +A++LK+  ++  ++L  N I + GA  +  
Sbjct: 100 GDLI--CKSPRLLGLNLQGNRIKSEGAQYLAESLKECTSLQYLNLNLNKIKTNGAMMVTE 157

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG----NINTLKLGWCQIGASGAEFVAD 493
           +L  +  + SL+L  N I  DG   +  VL         +N     +  I  S A     
Sbjct: 158 LLFTHDKLLSLNLGNNKIDHDGIIGILSVLNSSNYTLEELNIDNPVYKTICQSVAIHFGK 217

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
           M + N  +  L LR + LRD+G   + +   + N  L  +DL  NEI   G  AIA+ LK
Sbjct: 218 MFQNNVGLQKLSLRKHKLRDDGVYIIMEHL-LENNTLKILDLNSNEISFKGCDAIAKYLK 276

Query: 554 ANEDVAVTSLNLANNFLTKFGQSALTDA 581
           +  + ++ SL+LANN  + +G  A++ A
Sbjct: 277 SG-NCSLESLHLANNKCSDYGAKAISQA 303


>gi|301089094|ref|XP_002894888.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262105397|gb|EEY63449.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 436

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 189/417 (45%), Gaps = 53/417 (12%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           MS R+ GD     LA S+  N   EE+  + + +   G++AF   L +N  LK L+L   
Sbjct: 28  MSTRSIGDSDFVKLASSISSNTLLEELYLSGHQLGPLGLQAFADCLATNSTLKHLSLGSE 87

Query: 229 PIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            +GDE V+ LC  L  N  +G++   L    L   GA A+AELLK N  L  + L+ N I
Sbjct: 88  KLGDEAVQVLCAGLARNTQSGLQNWDLEFKSLGANGAAAVAELLKTNKSLTTVSLSRNQI 147

Query: 287 DYSGFTSLAEALLEN--STIRSLHLN--GNYGGALGA----------------------- 319
              G   LA+ L EN  S ++ L++   G  G  LG                        
Sbjct: 148 GDEGVEKLAKGLSENAQSGVKELNVTEVGISGSGLGHLATLVEKETCSLSTIQLSFNTLE 207

Query: 320 -------NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                  +ALAK    NKS+ +L L    + D+ + AL + L  +   L  +D+ +N ++
Sbjct: 208 SATSTFFDALAK----NKSVTKLQLKECKLSDQHVAALSAAL-KQNTTLVEIDLSDNELT 262

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKG 431
                 +AE +   K+L  + +  N   DEGA  +AD L   N T+T +D+G N + S G
Sbjct: 263 QTSCASLAEGLCENKTLKILRINNNKCLDEGAALLADVLVTNNTTLTYLDMGNNGLTSVG 322

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
            + +   LK  S +T L L  N +G +G   L   L  +  I T  +G  Q+  + +  +
Sbjct: 323 MTPL---LKAQS-LTQLHLFNNKLG-EGLSELLPALLANAVIETFGIGANQLHEALSVTM 377

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF--NEIRDDGAF 546
            D L  + ++  L++  N L   G   L +    + EA   +D+A   N   +D +F
Sbjct: 378 LDALHSHPSLKTLEMGGNTLGIAGHDALDK----LKEANRGLDVAVDKNAQNEDSSF 430



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 146/314 (46%), Gaps = 37/314 (11%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGV 213
           E  K  ++ ++V +S    GDEG+  LA+ L  N  +  +E++    GI+ +G+     +
Sbjct: 129 ELLKTNKSLTTVSLSRNQIGDEGVEKLAKGLSENAQSGVKELNVTEVGISGSGLGHLATL 188

Query: 214 LQ-SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           ++    +L T+ LS N + +       D L  N  V +LQL    L D+   A++  LK 
Sbjct: 189 VEKETCSLSTIQLSFNTL-ESATSTFFDALAKNKSVTKLQLKECKLSDQHVAALSAALKQ 247

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  ++L++N +  +   SLAE L EN T++ L +N                  NK L
Sbjct: 248 NTTLVEIDLSDNELTQTSCASLAEGLCENKTLKILRIN-----------------NNKCL 290

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
                      DEG   L   L +    L  LD+GNN +++ G   +   +K  +SL  +
Sbjct: 291 -----------DEGAALLADVLVTNNTTLTYLDMGNNGLTSVG---MTPLLK-AQSLTQL 335

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L+ N +G EG  ++  AL  N  I T  +G N +H   +  +   L  +  + +L++  
Sbjct: 336 HLFNNKLG-EGLSELLPALLANAVIETFGIGANQLHEALSVTMLDALHSHPSLKTLEMGG 394

Query: 453 NPIGADGAKALSEV 466
           N +G  G  AL ++
Sbjct: 395 NTLGIAGHDALDKL 408



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 36/201 (17%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++ + + +      D+ +  L+ +L  N T  E+  + N +T     +    L  N  LK
Sbjct: 221 KSVTKLQLKECKLSDQHVAALSAALKQNTTLVEIDLSDNELTQTSCASLAEGLCENKTLK 280

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI--AELLKNNSILRVL 279
            L ++ N   DEG   L D+LV N       L+ +D+ + G  ++    LLK  S+ ++ 
Sbjct: 281 ILRINNNKCLDEGAALLADVLVTN----NTTLTYLDMGNNGLTSVGMTPLLKAQSLTQLH 336

Query: 280 ELNNNMIDYSGFTSLAEALLENSTI----------------------------RSLHLNG 311
             NN + +  G + L  ALL N+ I                            ++L + G
Sbjct: 337 LFNNKLGE--GLSELLPALLANAVIETFGIGANQLHEALSVTMLDALHSHPSLKTLEMGG 394

Query: 312 NYGGALGANALAKGLEGNKSL 332
           N  G  G +AL K  E N+ L
Sbjct: 395 NTLGIAGHDALDKLKEANRGL 415


>gi|327266796|ref|XP_003218190.1| PREDICTED: leucine-rich repeat-containing protein 34-like [Anolis
           carolinensis]
          Length = 455

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 124/249 (49%), Gaps = 33/249 (13%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N ++  GA HVA ++++  +LL++NL  NDIG  GAE IA AL +N T+  + + 
Sbjct: 119 LDLRYNLLTDAGAVHVAAFLQDNHTLLYLNLMFNDIGTIGAEFIAKALHRNETLLHLRMT 178

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL------- 476
           GN I +KG    A +L+ N+ I  LD A   +      AL+ VL  H +I  +       
Sbjct: 179 GNKIENKGGMYFAAMLQVNTTIQKLDFADCDLRTQSLIALATVLNQHESIRAINLNRPIL 238

Query: 477 ----------------------KLGWC--QIGASGAEFVADMLRYNNTISILDLRANGLR 512
                                 +L  C  ++   G E + D L  N T+  LDL  N + 
Sbjct: 239 YSEEEEPTVHLALMLKVNSVLVELHLCKHEMKNFGVERLCDALYENTTLRYLDLSCNKIT 298

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
            +G + L +  K +N  L  +DL FN I DDGAF +++AL +  +  + +L + +N +T 
Sbjct: 299 RDGVQFLGRLLK-INSTLEILDLNFNRIEDDGAFYLSEALTS-YNRTLQALAVTHNNITG 356

Query: 573 FGQSALTDA 581
            G  AL+++
Sbjct: 357 QGLVALSES 365



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 150/318 (47%), Gaps = 7/318 (2%)

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
           I +  AG  RL +    + D   + +A L  NN  L  L+L  N++  +G   +A  L +
Sbjct: 82  ITIKIAGNNRL-VPVQKVTDADFQILATLFTNNIFLTGLDLRYNLLTDAGAVHVAAFLQD 140

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N T+  L+L  N  G +GA  +AK L  N++L  L + GN I ++G     + +      
Sbjct: 141 NHTLLYLNLMFNDIGTIGAEFIAKALHRNETLLHLRMTGNKIENKG-GMYFAAMLQVNTT 199

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE---KIADALKQNRTI 417
           +  LD  +  +  +    +A  +   +S+  INL    +  E  E    +A  LK N  +
Sbjct: 200 IQKLDFADCDLRTQSLIALATVLNQHESIRAINLNRPILYSEEEEPTVHLALMLKVNSVL 259

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
             + L  + + + G   +   L +N+ +  LDL+ N I  DG + L  +LK +  +  L 
Sbjct: 260 VELHLCKHEMKNFGVERLCDALYENTTLRYLDLSCNKITRDGVQFLGRLLKINSTLEILD 319

Query: 478 LGWCQIGASGAEFVADMLR-YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
           L + +I   GA ++++ L  YN T+  L +  N +  +G   L++S K +N  L+ I + 
Sbjct: 320 LNFNRIEDDGAFYLSEALTSYNRTLQALAVTHNNITGQGLVALSESMK-INPVLSYIYIW 378

Query: 537 FNEIRDDGAFAIAQALKA 554
            N+  +D   A A  +K+
Sbjct: 379 GNKFDNDTCVAFADLIKS 396



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 137/308 (44%), Gaps = 8/308 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+      D G   +A  L  N T   ++   N I   G +     L  N  L  L
Sbjct: 116 LTGLDLRYNLLTDAGAVHVAAFLQDNHTLLYLNLMFNDIGTIGAEFIAKALHRNETLLHL 175

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            ++GN I ++G      +L  N  +++L  +  DLR +   A+A +L  +  +R + LN 
Sbjct: 176 RMTGNKIENKGGMYFAAMLQVNTTIQKLDFADCDLRTQSLIALATVLNQHESIRAINLNR 235

Query: 284 NMI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            ++   +      LA  L  NS +  LHL  +     G   L   L  N +LR L L  N
Sbjct: 236 PILYSEEEEPTVHLALMLKVNSVLVELHLCKHEMKNFGVERLCDALYENTTLRYLDLSCN 295

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC-KSLLWINLYMNDI 399
            I  +G++  +  L      L +LD+  N I   GAF+++E + +  ++L  + +  N+I
Sbjct: 296 KITRDGVQ-FLGRLLKINSTLEILDLNFNRIEDDGAFYLSEALTSYNRTLQALAVTHNNI 354

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI-TSLDLAYNPIGAD 458
             +G   +++++K N  ++ I + GN   +    A A ++K   +  T  D+   P   D
Sbjct: 355 TGQGLVALSESMKINPVLSYIYIWGNKFDNDTCVAFADLIKSGRLAPTGTDV--EPYEVD 412

Query: 459 GAKALSEV 466
           G    +EV
Sbjct: 413 GTTYFAEV 420



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 4/270 (1%)

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           + F  LA     N  +  L L  N     GA  +A  L+ N +L  L+L  N IG  G  
Sbjct: 101 ADFQILATLFTNNIFLTGLDLRYNLLTDAGAVHVAAFLQDNHTLLYLNLMFNDIGTIGAE 160

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            +   L  R   L  L +  N I  KG  + A  ++   ++  ++    D+  +    +A
Sbjct: 161 FIAKALH-RNETLLHLRMTGNKIENKGGMYFAAMLQVNTTIQKLDFADCDLRTQSLIALA 219

Query: 409 DALKQNRTITTIDLGGNNIHSKGASA---IARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             L Q+ +I  I+L    ++S+       +A +LK NSV+  L L  + +   G + L +
Sbjct: 220 TVLNQHESIRAINLNRPILYSEEEEPTVHLALMLKVNSVLVELHLCKHEMKNFGVERLCD 279

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L  +  +  L L   +I   G +F+  +L+ N+T+ ILDL  N + D+GA  L+++   
Sbjct: 280 ALYENTTLRYLDLSCNKITRDGVQFLGRLLKINSTLEILDLNFNRIEDDGAFYLSEALTS 339

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            N  L ++ +  N I   G  A+++++K N
Sbjct: 340 YNRTLQALAVTHNNITGQGLVALSESMKIN 369



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 3/262 (1%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F ++      +++   + G  G  F+A++L  N+T   +    N I   G   F  +LQ 
Sbjct: 137 FLQDNHTLLYLNLMFNDIGTIGAEFIAKALHRNETLLHLRMTGNKIENKGGMYFAAMLQV 196

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKNN 273
           N  ++ L+ +   +  + +  L  +L  +  +  + L+   L    +E    +A +LK N
Sbjct: 197 NTTIQKLDFADCDLRTQSLIALATVLNQHESIRAINLNRPILYSEEEEPTVHLALMLKVN 256

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           S+L  L L  + +   G   L +AL EN+T+R L L+ N     G   L + L+ N +L 
Sbjct: 257 SVLVELHLCKHEMKNFGVERLCDALYENTTLRYLDLSCNKITRDGVQFLGRLLKINSTLE 316

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L+ N I D+G   L   L+S    L  L + +N+I+ +G   ++E +K    L +I 
Sbjct: 317 ILDLNFNRIEDDGAFYLSEALTSYNRTLQALAVTHNNITGQGLVALSESMKINPVLSYIY 376

Query: 394 LYMNDIGDEGAEKIADALKQNR 415
           ++ N   ++     AD +K  R
Sbjct: 377 IWGNKFDNDTCVAFADLIKSGR 398



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 1/99 (1%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGIT 203
           K+ R+  Q L    K       +D++     D+G F+L+E+L  YN+T + ++   N IT
Sbjct: 296 KITRDGVQFLGRLLKINSTLEILDLNFNRIEDDGAFYLSEALTSYNRTLQALAVTHNNIT 355

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
             G+ A    ++ N  L  + + GN   ++      D++
Sbjct: 356 GQGLVALSESMKINPVLSYIYIWGNKFDNDTCVAFADLI 394


>gi|357440741|ref|XP_003590648.1| Ran GTPase activating protein [Medicago truncatula]
 gi|355479696|gb|AES60899.1| Ran GTPase activating protein [Medicago truncatula]
          Length = 507

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 177/380 (46%), Gaps = 38/380 (10%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVS---FAANGITAAGIKA---FDGVLQ 215
           +F+++  S R+FG +    +   L       +EV    F A    A  I+    F   L+
Sbjct: 127 SFTNICFSNRSFGLDAAHVVEPMLISIKDQLKEVDLSDFIAGRPEAEAIEVMNIFSSALE 186

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
             + L+ LNLS N +G++GV+    +L     +E L L +  + +E AKA+AEL+ +   
Sbjct: 187 GAV-LRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPSTEK 245

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+VL  +NNM    G  ++A+ +  +  +     +    GA G  ALA+ L     L++L
Sbjct: 246 LKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKL 305

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N  G E   AL                             ++ I     L  I L 
Sbjct: 306 DLRDNMFGVEAGVAL-----------------------------SKVIPVFADLTEIYLS 336

Query: 396 MNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             ++ D+GAE +A+ALK++  ++  +D+ GN+I +K A ++A  +     +T L+L+ N 
Sbjct: 337 YLNLEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENE 396

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +  +GA  +S+ L+  G ++ + L    I  SGA+ +A+ +       +L++ AN + DE
Sbjct: 397 LKDEGAGLISKALEGLGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNVNANFISDE 456

Query: 515 GAKCLAQSFKVVNEALTSID 534
           G   L   FK   + L  +D
Sbjct: 457 GIDELKDIFKNSPDILGPLD 476



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 32/271 (11%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG   LR L+L  N++G++G+RA  + L S+   L  L + N+ IS + A  V
Sbjct: 179 NIFSSALEG-AVLRHLNLSNNAMGEKGVRAFRALLKSQN-DLEELYLMNDGISEEAAKAV 236

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE I + + L  ++ + N  GDEGA  IAD                            V+
Sbjct: 237 AELIPSTEKLKVLHFHNNMTGDEGAFAIAD----------------------------VM 268

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           K +  +     +   +GA+G  AL+E L    ++  L L     G      ++ ++    
Sbjct: 269 KRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFA 328

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
            ++ + L    L D+GA+ LA + K    +L  +D+A N+I    A ++A+ + + +   
Sbjct: 329 DLTEIYLSYLNLEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQ--F 386

Query: 560 VTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
           +T LNL+ N L   G   ++ A + + ++SE
Sbjct: 387 LTKLNLSENELKDEGAGLISKALEGLGQLSE 417


>gi|291384548|ref|XP_002708639.1| PREDICTED: NLR family, pyrin domain containing 14 [Oryctolagus
            cuniculus]
          Length = 1102

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 155/319 (48%), Gaps = 4/319 (1%)

Query: 154  LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDG 212
            ++ F  + +    +D++G + GD G+  L E+L + +   + +   +  +T         
Sbjct: 721  ISNFLTQNQHLMHLDLTGSDIGDNGVKALCEALKHPRCKLQSLRLESCDLTTVCCLNISK 780

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  N +L  LNLS N + D+GVK LC+ L      +ERL L S  L + G + ++  L 
Sbjct: 781  ALIRNQSLGFLNLSTNNLLDDGVKLLCEALRHPKCPLERLSLESCGLTEAGCEDLSLALI 840

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNK 330
             N+ L  L L +N++   G   +++AL     T++SL L   +  +L +  L+  L  NK
Sbjct: 841  TNTRLTHLCLTDNVLGDGGVKFMSDALQHPQCTLQSLVLRRCHLTSLSSRCLSTSLLYNK 900

Query: 331  SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
            SLR L L  N + DEG + L          L  +++   +I++     +A  I N  ++ 
Sbjct: 901  SLRHLDLALNFLQDEGAKLLCDVFRHPSCSLQDVELVGCAITSACCLDLASAILNNPNIW 960

Query: 391  WINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             ++L  N++ D G + + DAL+  N  I  + L    + S     ++  L  N  +  ++
Sbjct: 961  SMDLGNNNLQDGGVKILCDALRHPNCNIQKLGLAYCGLTSLCCRDLSSTLISNQRLRKIN 1020

Query: 450  LAYNPIGADGAKALSEVLK 468
            L  NP+G++G K L EVL+
Sbjct: 1021 LTQNPLGSEGIKKLCEVLR 1039



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 133/269 (49%), Gaps = 7/269 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G LG   ++  L  N+ L  L L G+ IGD G++AL   L   + KL  L + +  ++  
Sbjct: 717 GCLG---ISNFLTQNQHLMHLDLTGSDIGDNGVKALCEALKHPRCKLQSLRLESCDLTTV 773

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
              ++++ +   +SL ++NL  N++ D+G + + +AL+  +  +  + L    +   G  
Sbjct: 774 CCLNISKALIRNQSLGFLNLSTNNLLDDGVKLLCEALRHPKCPLERLSLESCGLTEAGCE 833

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVA 492
            ++  L  N+ +T L L  N +G  G K +S+ L+     + +L L  C + +  +  ++
Sbjct: 834 DLSLALITNTRLTHLCLTDNVLGDGGVKFMSDALQHPQCTLQSLVLRRCHLTSLSSRCLS 893

Query: 493 DMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
             L YN ++  LDL  N L+DEGAK L   F+  + +L  ++L    I       +A A+
Sbjct: 894 TSLLYNKSLRHLDLALNFLQDEGAKLLCDVFRHPSCSLQDVELVGCAITSACCLDLASAI 953

Query: 553 KANEDVAVTSLNLANNFLTKFGQSALTDA 581
             N ++   S++L NN L   G   L DA
Sbjct: 954 LNNPNIW--SMDLGNNNLQDGGVKILCDA 980



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 156/343 (45%), Gaps = 11/343 (3%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G       L  N  L  L+L+G+ IGD GVK LC+ L      ++ L+L S DL      
Sbjct: 717  GCLGISNFLTQNQHLMHLDLTGSDIGDNGVKALCEALKHPRCKLQSLRLESCDLTTVCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I++ L  N  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISKALIRNQSLGFLNLSTNNLLD-DGVKLLCEALRHPKCPLERLSLESCGLTEAGCEDL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  N  L  L L  N +GD G++ +   L   +  L  L +    +++  +  ++  
Sbjct: 836  SLALITNTRLTHLCLTDNVLGDGGVKFMSDALQHPQCTLQSLVLRRCHLTSLSSRCLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKD 441
            +   KSL  ++L +N + DEGA+ + D  +  + ++  ++L G  I S     +A  + +
Sbjct: 896  LLYNKSLRHLDLALNFLQDEGAKLLCDVFRHPSCSLQDVELVGCAITSACCLDLASAILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG--WCQIGASGAEFVADMLRYNN 499
            N  I S+DL  N +   G K L + L+ H N N  KLG  +C + +     ++  L  N 
Sbjct: 956  NPNIWSMDLGNNNLQDGGVKILCDALR-HPNCNIQKLGLAYCGLTSLCCRDLSSTLISNQ 1014

Query: 500  TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL---AFNE 539
             +  ++L  N L  EG K L +  +     L ++ L   AF+E
Sbjct: 1015 RLRKINLTQNPLGSEGIKKLCEVLRSPQCKLQTLGLCKEAFDE 1057


>gi|320170071|gb|EFW46970.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 668

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 131/234 (55%), Gaps = 4/234 (1%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+GL+ N +L+ L L  N IGD G +A+ S L + K  L  L +  N IS  GAF VAE
Sbjct: 37  IAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRN-KSTLIALSLNENKISDIGAFAVAE 95

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            ++   +L  + +++N IGD GA+ I  AL+    ++ + L  N I   GA AIA  L+ 
Sbjct: 96  GLQASTALTELGMFINQIGDAGAQAIGSALRNKANLSILHLSNNKIGDIGAFAIAEGLQA 155

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           ++ +T L +  N IG  GA+A+   L+   ++++L L   +I   GA  VA+ L+ +  +
Sbjct: 156 STALTQLGMFTNQIGDGGAQAIGSALRNKASLSSLYLDVNRISDIGACAVAEGLQTSTAL 215

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEA-LTSIDLAFNEIRDDGAFAIAQALKA 554
           + L +  N + D GA+ +  + +  N+A L+ ++L+ N+I       I++++ A
Sbjct: 216 TQLGMHTNQIGDAGAQAIGAALR--NKANLSKLNLSDNQISASAVQLISKSVPA 267



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 29/282 (10%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  ++ ++ S V ++  +   +    +AE L  N   + +  + N I  AG +A    L+
Sbjct: 11  ELFEKAKSSSRVILARSDITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALR 70

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +   L  L+L+ N I D G   + + L  +  +  L +    + D GA+AI   L+N + 
Sbjct: 71  NKSTLIALSLNENKISDIGAFAVAEGLQASTALTELGMFINQIGDAGAQAIGSALRNKAN 130

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L +L L+NN I                            G +GA A+A+GL+ + +L +L
Sbjct: 131 LSILHLSNNKI----------------------------GDIGAFAIAEGLQASTALTQL 162

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            +  N IGD G +A+ S L + K  L+ L +  N IS  GA  VAE ++   +L  + ++
Sbjct: 163 GMFTNQIGDGGAQAIGSALRN-KASLSSLYLDVNRISDIGACAVAEGLQTSTALTQLGMH 221

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            N IGD GA+ I  AL+    ++ ++L  N I +     I++
Sbjct: 222 TNQIGDAGAQAIGAALRNKANLSKLNLSDNQISASAVQLISK 263



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 5/214 (2%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  + I+   A  +AE +K   +L ++ L  N IGD GA+ I  AL+   T+  + L  N
Sbjct: 24  LARSDITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRNKSTLIALSLNEN 83

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   GA A+A  L+ ++ +T L +  N IG  GA+A+   L+   N++ L L   +IG 
Sbjct: 84  KISDIGAFAVAEGLQASTALTELGMFINQIGDAGAQAIGSALRNKANLSILHLSNNKIGD 143

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA-LTSIDLAFNEIRDDG 544
            GA  +A+ L+ +  ++ L +  N + D GA+ +  + +  N+A L+S+ L  N I D G
Sbjct: 144 IGAFAIAEGLQASTALTQLGMFTNQIGDGGAQAIGSALR--NKASLSSLYLDVNRISDIG 201

Query: 545 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           A A+A+ L+ +   A+T L +  N +   G  A+
Sbjct: 202 ACAVAEGLQTS--TALTQLGMHTNQIGDAGAQAI 233



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 3/200 (1%)

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           E  +  KS   + L  +DI  + A  IA+ LK N  +  ++L  N I   GA AI   L+
Sbjct: 11  ELFEKAKSSSRVILARSDITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALR 70

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
           + S + +L L  N I   GA A++E L+    +  L +   QIG +GA+ +   LR    
Sbjct: 71  NKSTLIALSLNENKISDIGAFAVAEGLQASTALTELGMFINQIGDAGAQAIGSALRNKAN 130

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           +SIL L  N + D GA  +A+  +  + ALT + +  N+I D GA AI  AL+     ++
Sbjct: 131 LSILHLSNNKIGDIGAFAIAEGLQ-ASTALTQLGMFTNQIGDGGAQAIGSALR--NKASL 187

Query: 561 TSLNLANNFLTKFGQSALTD 580
           +SL L  N ++  G  A+ +
Sbjct: 188 SSLYLDVNRISDIGACAVAE 207



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 65/135 (48%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S + +S    GD G F +AE L  +    ++    N I   G +A    L++  +L +L
Sbjct: 131 LSILHLSNNKIGDIGAFAIAEGLQASTALTQLGMFTNQIGDGGAQAIGSALRNKASLSSL 190

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N I D G   + + L  +  + +L + +  + D GA+AI   L+N + L  L L++
Sbjct: 191 YLDVNRISDIGACAVAEGLQTSTALTQLGMHTNQIGDAGAQAIGAALRNKANLSKLNLSD 250

Query: 284 NMIDYSGFTSLAEAL 298
           N I  S    +++++
Sbjct: 251 NQISASAVQLISKSV 265


>gi|301756847|ref|XP_002914276.1| PREDICTED: LOW QUALITY PROTEIN: nucleotide-binding oligomerization
            domain-containing protein 2-like [Ailuropoda melanoleuca]
          Length = 1232

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 134/270 (49%), Gaps = 10/270 (3%)

Query: 294  LAEALLENSTIRSL---HLNGNYGGALGAN--ALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            + E  L    +R L   HL   + G   A   ALA  L   +    L L  NS+GD G+ 
Sbjct: 941  MQEERLAREAVRGLKVGHLKLTFCGVGPAECAALAFVLRHLRRPMALQLDHNSVGDVGVE 1000

Query: 349  ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
             L+  LS  K     L + +N+IS +G   + E+  +C+ L  + L+ N + D  A  +A
Sbjct: 1001 QLLPCLSVCKA----LYLRDNNISDRGVCKLVEHAIHCQQLQKLALFNNKLTDGCAHSLA 1056

Query: 409  DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
              L   R    + LG N+I + GA  +A  L+ N  +  L L  N +G +GA+AL+E L+
Sbjct: 1057 RLLACKRNFLALRLGNNHITAAGAQVLAEGLRANGSLQFLGLWGNKVGDEGAQALAEALR 1116

Query: 469  FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
             H ++  L L    IG+ GA+ +A ML  N  +  L L  N L+DEG   LA+  +  N 
Sbjct: 1117 DHQSLRWLSLVGNNIGSRGAQALALMLEKNVALEELCLEENHLQDEGVCSLAKGLE-RNS 1175

Query: 529  ALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
             L  + L+ N I   GA A+ +AL+ N+ +
Sbjct: 1176 RLKVLKLSNNYITYLGAEALLRALERNDTI 1205



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 195/419 (46%), Gaps = 29/419 (6%)

Query: 104  VLWKLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGF-TGKLFRESKQTLNEFAKELR 162
            +L +L+  + +P+P RP    A  +  +      + + F  G L RE    L E     R
Sbjct: 835  LLARLLPPMCVPRPERPDGGDAALLQEAEPHNLQITAAFLAGLLSREHGGLLAECQVSER 894

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            A        R  G  G   L+ SL  ++    +  A  G  A  +  F  +++S   ++ 
Sbjct: 895  ALLQ-----RQAGARGC--LSRSL--HEHFHSIPAAVPGXHA--MPGFVWLIRSLYEMQE 943

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
              L+   +   G+K           V  L+L+   +      A+A +L++      L+L+
Sbjct: 944  ERLAREAV--RGLK-----------VGHLKLTFCGVGPAECAALAFVLRHLRRPMALQLD 990

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +N +   G   L   L   S  ++L+L  N     G   L +     + L++L L  N +
Sbjct: 991  HNSVGDVGVEQLLPCL---SVCKALYLRDNNISDRGVCKLVEHAIHCQQLQKLALFNNKL 1047

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
             D    +L   L+ ++  LA L +GNN I+A GA  +AE ++   SL ++ L+ N +GDE
Sbjct: 1048 TDGCAHSLARLLACKRNFLA-LRLGNNHITAAGAQVLAEGLRANGSLQFLGLWGNKVGDE 1106

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            GA+ +A+AL+ ++++  + L GNNI S+GA A+A +L+ N  +  L L  N +  +G  +
Sbjct: 1107 GAQALAEALRDHQSLRWLSLVGNNIGSRGAQALALMLEKNVALEELCLEENHLQDEGVCS 1166

Query: 463  LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            L++ L+ +  +  LKL    I   GAE +   L  N+TI  + LR N    E  + L Q
Sbjct: 1167 LAKGLERNSRLKVLKLSNNYITYLGAEALLRALERNDTILEVWLRGNTFSPEEIERLGQ 1225


>gi|254692966|ref|NP_001028379.2| protein NLRC5 [Mus musculus]
 gi|306756308|sp|C3VPR6.2|NLRC5_MOUSE RecName: Full=Protein NLRC5
          Length = 1915

 Score =  107 bits (266), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 116/433 (26%), Positives = 190/433 (43%), Gaps = 12/433 (2%)

Query: 160  ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
            EL++F    ++      + L  LA  LG+    EE+ F+ N +     +   G LQ    
Sbjct: 1493 ELKSFR---LTFSQVSTKSLTHLAFGLGHCHHLEELDFSNNSLREEDTELLMGALQGTCR 1549

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            LK L+LS  P+G   +  L   L     ++ L LS   + D G + +A +L     LR  
Sbjct: 1550 LKKLHLSFLPLGASSLALLIQGLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKF 1609

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            +L++N I   G   LA  L +   +R  +L+ N  G +G   LA  L     LR+  L  
Sbjct: 1610 DLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSR 1669

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N IGD G + L + +  +  +L   D+  N I   G   + + + + + L  I L  N +
Sbjct: 1670 NQIGDVGTQCL-AAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNAL 1728

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            G+  A ++A  L     +  + L  +++  +GA  +A+ L+    I  + LA N + A G
Sbjct: 1729 GEPTALELAQRLPPQ--LRVLCLPSSHLGPEGALGLAQALEQCPHIEEVSLAENNL-AGG 1785

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
                S+ L     +  + L +C+I    A  +A  L     +  L L  N L DE A  L
Sbjct: 1786 VPRFSKRLPL---LRQIDLEFCKIEDQAARHLAANLTLFPALEKLLLSGNLLGDEVAAEL 1842

Query: 520  AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
            AQ    + + L  ++L +N I   GA  +AQ L     V V  L   N  L    QS  +
Sbjct: 1843 AQVLPQMGQ-LKKVNLEWNRITARGAQLLAQGLVQGSCVPVIRL-WNNPILNDVAQSLQS 1900

Query: 580  DAKDLVYEMSEKE 592
                L + +++++
Sbjct: 1901 QEPRLDFSITDQQ 1913



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 92/395 (23%), Positives = 163/395 (41%), Gaps = 58/395 (14%)

Query: 193  EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
            E +SF +     A  +A    L +  +LKTL L+G+ I  +G+  L   L   + +E + 
Sbjct: 692  ENLSFKSRKCGDAFAEALCRSLPTMGSLKTLGLTGSRITAQGISHLIQTLPLCSQLEEVS 751

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG- 311
            L    L+D    ++ ELL +   L+ L+L+ N    S   SL +  +   T+R L +   
Sbjct: 752  LHDNQLKDPEVLSLVELLPSLPKLQKLDLSRNSFSRSILLSLVKVAITCPTVRKLQVREL 811

Query: 312  ---NYGGALGANAL----AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
                Y   +   A     A  ++G  SL+E    G S      R+L   L  +K +L + 
Sbjct: 812  DLIFYLSPVTETATQQSGASDVQGKDSLKE----GQS------RSLQ--LRLQKCQLRIR 859

Query: 365  DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            D          A  + E  +    L  +NL  N + D+G   +A+A  Q      +DL  
Sbjct: 860  D----------AEALVELFQKSPQLEEVNLSGNHLEDDGCRLVAEAASQLHIAQKLDLSD 909

Query: 425  NNIHSKGASAIARVLK-------------DNSVITSLDLAYNPIGADGA-KALSEVLKFH 470
            N +   G + + + +              +N+V+  L  A  P   +G+ K  + ++ F 
Sbjct: 910  NGLSQTGVTYVLKAMSTCGTLEDLHISLLNNTVV--LTFAQEPREQEGSCKGRAPLISFV 967

Query: 471  GNINT--------LKLGWCQIGASGAEFVADMLRYN---NTISILDLRANGLRDEGAKCL 519
              + +        ++L  C   A   E + + LR +   + +  LDL  N L  +G   L
Sbjct: 968  SPVTSELSQRSRRIRLTHCGFLAKHTETLCEALRASCQTHNLDHLDLSDNSLGGKGVILL 1027

Query: 520  AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
             +    +   L S++L+ N +  D  F++ Q L +
Sbjct: 1028 TELLPGLG-PLKSLNLSRNGLSMDAVFSLVQCLSS 1061



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 37/339 (10%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            +  ++ ++G     +G+  L ++L      EEVS   N +    + +   +L S   L+ 
Sbjct: 718  SLKTLGLTGSRITAQGISHLIQTLPLCSQLEEVSLHDNQLKDPEVLSLVELLPSLPKLQK 777

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L+LS N      +  L  + +    V +LQ+  +DL          +   + +       
Sbjct: 778  LDLSRNSFSRSILLSLVKVAITCPTVRKLQVRELDL----------IFYLSPVTETATQQ 827

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +   D  G  SL E     S    L L         A AL +  + +  L E++L GN +
Sbjct: 828  SGASDVQGKDSLKEG---QSRSLQLRLQKCQLRIRDAEALVELFQKSPQLEEVNLSGNHL 884

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LWINLYMNDI- 399
             D+G R L++  +S+      LD+ +N +S  G  +V + +  C +L  L I+L  N + 
Sbjct: 885  EDDGCR-LVAEAASQLHIAQKLDLSDNGLSQTGVTYVLKAMSTCGTLEDLHISLLNNTVV 943

Query: 400  --------GDEGAEK------------IADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
                      EG+ K             ++  +++R I     G    H++      R  
Sbjct: 944  LTFAQEPREQEGSCKGRAPLISFVSPVTSELSQRSRRIRLTHCGFLAKHTETLCEALRAS 1003

Query: 440  KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
                 +  LDL+ N +G  G   L+E+L   G + +L L
Sbjct: 1004 CQTHNLDHLDLSDNSLGGKGVILLTELLPGLGPLKSLNL 1042



 Score = 45.8 bits (107), Expect = 0.057,   Method: Composition-based stats.
 Identities = 99/447 (22%), Positives = 167/447 (37%), Gaps = 44/447 (9%)

Query: 141  GFTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
            GF G  L +E  +TL     +  A S +D++    GD GL  L E L     +  +  + 
Sbjct: 1219 GFPGCSLSQEHMETLCCALSKCNALSQLDLTDNLLGDIGLRCLLECLPQLPISGWLDLSH 1278

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N I+  GI      L S   ++ +++S   +  E +  +C    + AG   L+L      
Sbjct: 1279 NNISQEGILYLLETLPSYPNIQEVSVS---LSSEQIFRMCFSKKEGAGTS-LRLCECSFS 1334

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
             E    +A  L     L  L L    +D    T L   +   + +  L L   +  ++  
Sbjct: 1335 PEQVSKLASSLSQAQQLTELWLTKCHLDLPQLTMLLNLVNRPTGLLGLRLEEPWVDSVSL 1394

Query: 320  NAL------AKGLEGNKSLREL-----------HLHGNSIGDEGIRA-----------LM 351
             AL      A G     S+ E+           H  GNS     +R            LM
Sbjct: 1395 PALMEVCAQASGCLTELSISEIQRKLWLQLEFPHQEGNS-DSMALRLAHCDLETEHSHLM 1453

Query: 352  SGLSSRKGKLAVLDIG------NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
              L     +L  L +       N+  S+K   ++   + +C+ L    L  + +  +   
Sbjct: 1454 IQLVETYARLQQLSLSQVSFNDNDGTSSKLLQNI--LLSSCE-LKSFRLTFSQVSTKSLT 1510

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             +A  L     +  +D   N++  +    +   L+    +  L L++ P+GA     L +
Sbjct: 1511 HLAFGLGHCHHLEELDFSNNSLREEDTELLMGALQGTCRLKKLHLSFLPLGASSLALLIQ 1570

Query: 466  VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
             L     +  L L   QIG  G + +A +L     +   DL  N + D G +CLA     
Sbjct: 1571 GLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAAILPK 1630

Query: 526  VNEALTSIDLAFNEIRDDGAFAIAQAL 552
            + E L   +L+ N+I   G   +A  L
Sbjct: 1631 LPE-LRKFNLSHNQIGHVGTQCLAAIL 1656


>gi|227809548|gb|ACP40992.1| NLRC5 [Mus musculus]
          Length = 1915

 Score =  106 bits (265), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 116/433 (26%), Positives = 190/433 (43%), Gaps = 12/433 (2%)

Query: 160  ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
            EL++F    ++      + L  LA  LG+    EE+ F+ N +     +   G LQ    
Sbjct: 1493 ELKSFR---LTFSQVSTKSLTHLAFGLGHCHHLEELDFSNNSLREEDTELLMGALQGTCR 1549

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            LK L+LS  P+G   +  L   L     ++ L LS   + D G + +A +L     LR  
Sbjct: 1550 LKKLHLSFLPLGASSLALLIQGLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKF 1609

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            +L++N I   G   LA  L +   +R  +L+ N  G +G   LA  L     LR+  L  
Sbjct: 1610 DLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSR 1669

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N IGD G + L + +  +  +L   D+  N I   G   + + + + + L  I L  N +
Sbjct: 1670 NQIGDVGTQCL-AAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNAL 1728

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            G+  A ++A  L     +  + L  +++  +GA  +A+ L+    I  + LA N + A G
Sbjct: 1729 GEPTALELAQRLPPQ--LRVLCLPSSHLGPEGALGLAQALEQCPHIEEVSLAENNL-AGG 1785

Query: 460  AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
                S+ L     +  + L +C+I    A  +A  L     +  L L  N L DE A  L
Sbjct: 1786 VPRFSKRLPL---LRQIDLEFCKIEDQAARHLAANLTLFPALEKLLLSGNLLGDEVAAEL 1842

Query: 520  AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
            AQ    + + L  ++L +N I   GA  +AQ L     V V  L   N  L    QS  +
Sbjct: 1843 AQVLPQMGQ-LKKVNLEWNRITARGAQLLAQGLVQGSCVPVIRL-WNNPILNDVAQSLQS 1900

Query: 580  DAKDLVYEMSEKE 592
                L + +++++
Sbjct: 1901 QEPRLDFSITDQQ 1913



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 92/395 (23%), Positives = 163/395 (41%), Gaps = 58/395 (14%)

Query: 193  EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
            E +SF +     A  +A    L +  +LKTL L+G+ I  +G+  L   L   + +E + 
Sbjct: 692  ENLSFKSRKCGDAFAEALCRSLPTMGSLKTLGLTGSRITAQGISHLIQTLPLCSQLEEVS 751

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG- 311
            L    L+D    ++ ELL +   L+ L+L+ N    S   SL +  +   T+R L +   
Sbjct: 752  LHDNQLKDPEVLSLVELLPSLPKLQKLDLSRNSFSRSILLSLVKVAITCPTVRKLQVREL 811

Query: 312  ---NYGGALGANAL----AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
                Y   +   A     A  ++G  SL+E    G S      R+L   L  +K +L + 
Sbjct: 812  DLIFYLSPVTETATQQSGASDVQGKDSLKE----GQS------RSLQ--LRLQKCQLRIR 859

Query: 365  DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            D          A  + E  +    L  +NL  N + D+G   +A+A  Q      +DL  
Sbjct: 860  D----------AEALVELFQKSPQLEEVNLSRNHLEDDGCRLVAEAASQLHIAQKLDLSD 909

Query: 425  NNIHSKGASAIARVLK-------------DNSVITSLDLAYNPIGADGA-KALSEVLKFH 470
            N +   G + + + +              +N+V+  L  A  P   +G+ K  + ++ F 
Sbjct: 910  NGLSQTGVTYVLKAMSTCGTLEDLHISLLNNTVV--LTFAQEPREQEGSCKGRAPLISFV 967

Query: 471  GNINT--------LKLGWCQIGASGAEFVADMLRYN---NTISILDLRANGLRDEGAKCL 519
              + +        ++L  C   A   E + + LR +   + +  LDL  N L  +G   L
Sbjct: 968  SPVTSELSQRSRRIRLTHCGFLAKHTETLCEALRASCQTHNLDHLDLSDNSLGGKGVILL 1027

Query: 520  AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
             +    +   L S++L+ N +  D  F++ Q L +
Sbjct: 1028 TELLPGLG-PLKSLNLSRNGLSMDAVFSLVQCLSS 1061



 Score = 49.3 bits (116), Expect = 0.007,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 37/339 (10%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            +  ++ ++G     +G+  L ++L      EEVS   N +    + +   +L S   L+ 
Sbjct: 718  SLKTLGLTGSRITAQGISHLIQTLPLCSQLEEVSLHDNQLKDPEVLSLVELLPSLPKLQK 777

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L+LS N      +  L  + +    V +LQ+  +DL          +   + +       
Sbjct: 778  LDLSRNSFSRSILLSLVKVAITCPTVRKLQVRELDL----------IFYLSPVTETATQQ 827

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +   D  G  SL E     S    L L         A AL +  + +  L E++L  N +
Sbjct: 828  SGASDVQGKDSLKEG---QSRSLQLRLQKCQLRIRDAEALVELFQKSPQLEEVNLSRNHL 884

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LWINLYMNDI- 399
             D+G R L++  +S+      LD+ +N +S  G  +V + +  C +L  L I+L  N + 
Sbjct: 885  EDDGCR-LVAEAASQLHIAQKLDLSDNGLSQTGVTYVLKAMSTCGTLEDLHISLLNNTVV 943

Query: 400  --------GDEGAEK------------IADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
                      EG+ K             ++  +++R I     G    H++      R  
Sbjct: 944  LTFAQEPREQEGSCKGRAPLISFVSPVTSELSQRSRRIRLTHCGFLAKHTETLCEALRAS 1003

Query: 440  KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
                 +  LDL+ N +G  G   L+E+L   G + +L L
Sbjct: 1004 CQTHNLDHLDLSDNSLGGKGVILLTELLPGLGPLKSLNL 1042



 Score = 45.8 bits (107), Expect = 0.058,   Method: Composition-based stats.
 Identities = 99/447 (22%), Positives = 167/447 (37%), Gaps = 44/447 (9%)

Query: 141  GFTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
            GF G  L +E  +TL     +  A S +D++    GD GL  L E L     +  +  + 
Sbjct: 1219 GFPGCSLSQEHMETLCCALSKCNALSQLDLTDNLLGDIGLRCLLECLPQLPISGWLDLSH 1278

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N I+  GI      L S   ++ +++S   +  E +  +C    + AG   L+L      
Sbjct: 1279 NNISQEGILYLLETLPSYPNIQEVSVS---LSSEQIFRMCFSKKEGAGTS-LRLCECSFS 1334

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
             E    +A  L     L  L L    +D    T L   +   + +  L L   +  ++  
Sbjct: 1335 PEQVSKLASSLSQAQQLTELWLTKCHLDLPQLTMLLNLVNRPTGLLGLRLEEPWVDSVSL 1394

Query: 320  NAL------AKGLEGNKSLREL-----------HLHGNSIGDEGIRA-----------LM 351
             AL      A G     S+ E+           H  GNS     +R            LM
Sbjct: 1395 PALMEVCAQASGCLTELSISEIQRKLWLQLEFPHQEGNS-DSMALRLAHCDLETEHSHLM 1453

Query: 352  SGLSSRKGKLAVLDIG------NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
              L     +L  L +       N+  S+K   ++   + +C+ L    L  + +  +   
Sbjct: 1454 IQLVETYARLQQLSLSQVSFNDNDGTSSKLLQNI--LLSSCE-LKSFRLTFSQVSTKSLT 1510

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             +A  L     +  +D   N++  +    +   L+    +  L L++ P+GA     L +
Sbjct: 1511 HLAFGLGHCHHLEELDFSNNSLREEDTELLMGALQGTCRLKKLHLSFLPLGASSLALLIQ 1570

Query: 466  VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
             L     +  L L   QIG  G + +A +L     +   DL  N + D G +CLA     
Sbjct: 1571 GLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAAILPK 1630

Query: 526  VNEALTSIDLAFNEIRDDGAFAIAQAL 552
            + E L   +L+ N+I   G   +A  L
Sbjct: 1631 LPE-LRKFNLSHNQIGHVGTQCLAAIL 1656


>gi|147789790|emb|CAN73875.1| hypothetical protein VITISV_039541 [Vitis vinifera]
          Length = 541

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 141/275 (51%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I +E  + +C+++     +  LQ  
Sbjct: 220 LNLSNNALGEKGVRAFGALLKSQNNLEELYLMNDGISEEAARAVCELIPSTEKLRILQFH 279

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AI+E++K +  L     ++  +D  G  +LA+AL   + ++ L L  N  
Sbjct: 280 NNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLKKLDLRDNMF 339

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L   K L E++L   ++ DEG +A+ + L      L VL++  N I+ +
Sbjct: 340 GVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKESTPSLEVLEMAGNDITVE 399

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGAS 433
            A  +A  I   + L  ++L  N++ DEGA  I+ AL++ +  +T +DL  N+I   GA 
Sbjct: 400 AASTLAACIAAKQCLAKLSLAENELKDEGAILISKALEEGHNQLTEVDLNTNSIRRAGAR 459

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            +A+ +        L++  N I  +G   + ++ K
Sbjct: 460 FLAQTVASKPGFKLLNINGNFISDEGIDEVKDIFK 494



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 147/317 (46%), Gaps = 31/317 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  + +E A+A+ EL+ +   LR+L
Sbjct: 217 LKYLNLSNNALGEKGVRAFGALLKSQNNLEELYLMNDGISEEAARAVCELIPSTEKLRIL 276

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           + +NNM    G  +++E +  +  +     +     + G  ALAK L     L++L L  
Sbjct: 277 QFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLKKLDLRD 336

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E   AL   LS                    AF         K L  + L   ++
Sbjct: 337 NMFGVEAGVALSKALS--------------------AF---------KDLTEVYLSYLNL 367

Query: 400 GDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA+ IA+ALK++  ++  +++ GN+I  + AS +A  +     +  L LA N +  +
Sbjct: 368 EDEGAKAIANALKESTPSLEVLEMAGNDITVEAASTLAACIAAKQCLAKLSLAENELKDE 427

Query: 459 GAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           GA  +S+ L+  H  +  + L    I  +GA F+A  +       +L++  N + DEG  
Sbjct: 428 GAILISKALEEGHNQLTEVDLNTNSIRRAGARFLAQTVASKPGFKLLNINGNFISDEGID 487

Query: 518 CLAQSFKVVNEALTSID 534
            +   FK   + L  +D
Sbjct: 488 EVKDIFKNCPDVLGPLD 504



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 133/256 (51%), Gaps = 5/256 (1%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG   L+ L+L  N++G++G+RA  + L S +  L  L + N+ IS + A  V
Sbjct: 206 NIFSSALEGC-VLKYLNLSNNALGEKGVRAFGALLKS-QNNLEELYLMNDGISEEAARAV 263

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E I + + L  +  + N  GDEGA  I++ +K++  +         + S+G  A+A+ L
Sbjct: 264 CELIPSTEKLRILQFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKAL 323

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
              + +  LDL  N  G +   ALS+ L    ++  + L +  +   GA+ +A+ L+ + 
Sbjct: 324 GTCTRLKKLDLRDNMFGVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKEST 383

Query: 500 -TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++ +L++  N +  E A  LA       + L  + LA NE++D+GA  I++AL+   + 
Sbjct: 384 PSLEVLEMAGNDITVEAASTLAACI-AAKQCLAKLSLAENELKDEGAILISKALEEGHN- 441

Query: 559 AVTSLNLANNFLTKFG 574
            +T ++L  N + + G
Sbjct: 442 QLTEVDLNTNSIRRAG 457



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 4/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE   ++ L+L+ N  G  G  A    L+   +L EL+L  + I +E  RA+   + S +
Sbjct: 212 LEGCVLKYLNLSNNALGEKGVRAFGALLKSQNNLEELYLMNDGISEEAARAVCELIPSTE 271

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL +L   NN    +GA  ++E +K   +L         +  EG   +A AL     + 
Sbjct: 272 -KLRILQFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLK 330

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLK 477
            +DL  N    +   A+++ L     +T + L+Y  +  +GAKA++  LK    ++  L+
Sbjct: 331 KLDLRDNMFGVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKESTPSLEVLE 390

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I    A  +A  +     ++ L L  N L+DEGA  ++++ +  +  LT +DL  
Sbjct: 391 MAGNDITVEAASTLAACIAAKQCLAKLSLAENELKDEGAILISKALEEGHNQLTEVDLNT 450

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N IR  GA  +AQ + +     +  LN+  NF++  G   + D
Sbjct: 451 NSIRRAGARFLAQTVASKPGFKL--LNINGNFISDEGIDEVKD 491


>gi|444708816|gb|ELW49855.1| hypothetical protein TREES_T100012222 [Tupaia chinensis]
          Length = 511

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 138/281 (49%), Gaps = 17/281 (6%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     ++   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 61  NMEDSHMNLNHHGLGPRGTKAIAIALVSNTAITKLELEDNCIMEEGVLSLVEMLQENYYL 120

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + L +S  +L  EGA+ I+E L+ N S L  L L+ N       T L++AL  N  ++ L
Sbjct: 121 QELDISENELGLEGARIISEFLQRNISALWNLTLSGNSFKEESATLLSQALSANYRLKRL 180

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    LG   L + L  N  L  L L  N I  +G  AL +GL       A L + 
Sbjct: 181 DLSHNQFSDLGGEQLGQMLALNVGLTALDLSWNHIHTQGAVALCNGLR------ATLTLV 234

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
             S+S +    + +          ++L MN  G+EGA  + + L+ N T+  +D+ GN+I
Sbjct: 235 LFSLSMEANVTLKK----------LDLSMNGFGNEGASALGETLRLNSTLVYLDVNGNDI 284

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            ++GA  I+R L+ N  +  L L  NPI  +GA +L   +K
Sbjct: 285 GNEGAFKISRGLESNESLRVLKLFLNPISMEGAVSLILAIK 325



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 136/280 (48%), Gaps = 18/280 (6%)

Query: 308 HLNGNYGG--ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           H+N N+ G    G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  LD
Sbjct: 66  HMNLNHHGLGPRGTKAIAIALVSNTAITKLELEDNCIMEEGVLSLVEMLQENY-YLQELD 124

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           I  N +  +GA  ++E+++   S LW + L  N   +E A  ++ AL  N  +  +DL  
Sbjct: 125 ISENELGLEGARIISEFLQRNISALWNLTLSGNSFKEESATLLSQALSANYRLKRLDLSH 184

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-----------FHGNI 473
           N     G   + ++L  N  +T+LDL++N I   GA AL   L+              N+
Sbjct: 185 NQFSDLGGEQLGQMLALNVGLTALDLSWNHIHTQGAVALCNGLRATLTLVLFSLSMEANV 244

Query: 474 NTLKLGWCQ--IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALT 531
              KL       G  GA  + + LR N+T+  LD+  N + +EGA  +++  +  NE+L 
Sbjct: 245 TLKKLDLSMNGFGNEGASALGETLRLNSTLVYLDVNGNDIGNEGAFKISRGLES-NESLR 303

Query: 532 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            + L  N I  +GA ++  A+K N    +  L+++N  +T
Sbjct: 304 VLKLFLNPISMEGAVSLILAIKKNPKSRMEELDISNVLVT 343



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 130/297 (43%), Gaps = 43/297 (14%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            + N     + L+   L   G KAIA  L +N+ +  LEL +N I   G  SL E L EN
Sbjct: 58  FIRNMEDSHMNLNHHGLGPRGTKAIAIALVSNTAITKLELEDNCIMEEGVLSLVEMLQEN 117

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGK 360
             ++ L ++ N  G  GA  +++ L+ N S L  L L GNS  +E    L   LS+   +
Sbjct: 118 YYLQELDISENELGLEGARIISEFLQRNISALWNLTLSGNSFKEESATLLSQALSANY-R 176

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  LD+ +N  S                            D G E++   L  N  +T +
Sbjct: 177 LKRLDLSHNQFS----------------------------DLGGEQLGQMLALNVGLTAL 208

Query: 421 DLGGNNIHSKGASAIARVLK-------------DNSVITSLDLAYNPIGADGAKALSEVL 467
           DL  N+IH++GA A+   L+              N  +  LDL+ N  G +GA AL E L
Sbjct: 209 DLSWNHIHTQGAVALCNGLRATLTLVLFSLSMEANVTLKKLDLSMNGFGNEGASALGETL 268

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           + +  +  L +    IG  GA  ++  L  N ++ +L L  N +  EGA  L  + K
Sbjct: 269 RLNSTLVYLDVNGNDIGNEGAFKISRGLESNESLRVLKLFLNPISMEGAVSLILAIK 325



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 128/264 (48%), Gaps = 15/264 (5%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ L+
Sbjct: 65  SHMNLNHHGLGPRGTKAIAIALVSNTAITKLELEDNCIMEEGVLSLVEMLQENYYLQELD 124

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + + L  N + +  L LS    ++E A  +++ L  N  L+ L+L++
Sbjct: 125 ISENELGLEGARIISEFLQRNISALWNLTLSGNSFKEESATLLSQALSANYRLKRLDLSH 184

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL-------------EGNK 330
           N     G   L + L  N  + +L L+ N+    GA AL  GL             E N 
Sbjct: 185 NQFSDLGGEQLGQMLALNVGLTALDLSWNHIHTQGAVALCNGLRATLTLVLFSLSMEANV 244

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +L++L L  N  G+EG  AL   L      L  LD+  N I  +GAF ++  +++ +SL 
Sbjct: 245 TLKKLDLSMNGFGNEGASALGETL-RLNSTLVYLDVNGNDIGNEGAFKISRGLESNESLR 303

Query: 391 WINLYMNDIGDEGAEKIADALKQN 414
            + L++N I  EGA  +  A+K+N
Sbjct: 304 VLKLFLNPISMEGAVSLILAIKKN 327



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 110/238 (46%), Gaps = 15/238 (6%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +D+S    G EG   ++E L  N +A   ++ + N    
Sbjct: 102 IMEEGVLSLVEMLQENYYLQELDISENELGLEGARIISEFLQRNISALWNLTLSGNSFKE 161

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  LK L+LS N   D G + L  +L  N G+  L LS   +  +GA 
Sbjct: 162 ESATLLSQALSANYRLKRLDLSHNQFSDLGGEQLGQMLALNVGLTALDLSWNHIHTQGAV 221

Query: 265 AIAELLKN-------------NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           A+   L+              N  L+ L+L+ N     G ++L E L  NST+  L +NG
Sbjct: 222 ALCNGLRATLTLVLFSLSMEANVTLKKLDLSMNGFGNEGASALGETLRLNSTLVYLDVNG 281

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL-SSRKGKLAVLDIGN 368
           N  G  GA  +++GLE N+SLR L L  N I  EG  +L+  +  + K ++  LDI N
Sbjct: 282 NDIGNEGAFKISRGLESNESLRVLKLFLNPISMEGAVSLILAIKKNPKSRMEELDISN 339



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 20/203 (9%)

Query: 142 FTGKLFRESKQTLNEFAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            +G  F+E   TL   ++ L A      +D+S   F D G   L + L  N     +  +
Sbjct: 154 LSGNSFKEESATL--LSQALSANYRLKRLDLSHNQFSDLGGEQLGQMLALNVGLTALDLS 211

Query: 199 ANGITAAGIKA-------------FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
            N I   G  A             F   +++N+ LK L+LS N  G+EG   L + L  N
Sbjct: 212 WNHIHTQGAVALCNGLRATLTLVLFSLSMEANVTLKKLDLSMNGFGNEGASALGETLRLN 271

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
           + +  L ++  D+ +EGA  I+  L++N  LRVL+L  N I   G  SL  A+ +N   R
Sbjct: 272 STLVYLDVNGNDIGNEGAFKISRGLESNESLRVLKLFLNPISMEGAVSLILAIKKNPKSR 331

Query: 306 SLHLNGNYGGALGANALAKGLEG 328
              L  +    L  +   K LEG
Sbjct: 332 MEEL--DISNVLVTDQFTKILEG 352



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 2/133 (1%)

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           + ++L ++ +G  G KA++  L  +  I  L+L    I   G   + +ML+ N  +  LD
Sbjct: 65  SHMNLNHHGLGPRGTKAIAIALVSNTAITKLELEDNCIMEEGVLSLVEMLQENYYLQELD 124

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           +  N L  EGA+ +++  +    AL ++ L+ N  +++ A  ++QAL AN    +  L+L
Sbjct: 125 ISENELGLEGARIISEFLQRNISALWNLTLSGNSFKEESATLLSQALSAN--YRLKRLDL 182

Query: 566 ANNFLTKFGQSAL 578
           ++N  +  G   L
Sbjct: 183 SHNQFSDLGGEQL 195


>gi|410931217|ref|XP_003978992.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like,
           partial [Takifugu rubripes]
          Length = 919

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 181/392 (46%), Gaps = 13/392 (3%)

Query: 201 GITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDL 258
            +T     +    L+SN + L  L+LS N + D GVK LC  L   N  ++ L L    L
Sbjct: 512 SLTEISCGSLASALKSNPSHLTELDLSDNQLQDSGVKLLCSGLESPNCKLKTLILCDCSL 571

Query: 259 RDEGAKAIAELLKNN-SILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGG 315
            +    ++A  LK+N S LR L+L  NN +  SG   L   L   N  + +L L      
Sbjct: 572 SENSCDSLASALKSNFSHLRELDLGLNNQLQDSGVRLLCSGLESPNCKLETLRLRDCSLS 631

Query: 316 ALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
                +LA  L+ N S LREL L  N + D G++ L SGL S   KL  L + + S+S  
Sbjct: 632 ETSCGSLASALKSNPSHLRELDLKFNQLQDSGVKLLCSGLESPNCKLETLRLWSCSLSEI 691

Query: 375 GAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGA 432
               +A  +K N   L  ++L +N + D G + +   L+  N  + T+ L   ++     
Sbjct: 692 SCGSLASALKSNPSHLRELDLGLNHLQDSGVKLLCSGLESPNCKLKTLGLWRCSLSEISC 751

Query: 433 SAIARVLKDN-SVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEF 490
            ++A  LK N S +T LDL  N +   G K L   L+  +  + TL+L  C +       
Sbjct: 752 GSLASALKSNPSHLTELDLGDNQLQDSGVKLLCSALESPNCKLETLRLWGCSLSEISCGS 811

Query: 491 VADMLRYNN--TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           +A +L  +N   +  LDL  N L+D G K L    +  N  L ++ L    I +    ++
Sbjct: 812 LASVLSKSNFSHLRELDLSDNQLQDSGMKLLCSGLESPNCKLETLFLWSCSISEISCGSL 871

Query: 549 AQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           A ALK+N    +  L+L+ N L   G   L+D
Sbjct: 872 ASALKSNPS-HLKELDLSCNKLQDSGVKLLSD 902



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 174/383 (45%), Gaps = 13/383 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LK 221
            + +D+S     D G+  L   L   N   + +      ++     +    L+SN + L+
Sbjct: 532 LTELDLSDNQLQDSGVKLLCSGLESPNCKLKTLILCDCSLSENSCDSLASALKSNFSHLR 591

Query: 222 TLNLS-GNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRV 278
            L+L   N + D GV+ LC  L   N  +E L+L    L +    ++A  LK+N S LR 
Sbjct: 592 ELDLGLNNQLQDSGVRLLCSGLESPNCKLETLRLRDCSLSETSCGSLASALKSNPSHLRE 651

Query: 279 LELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS-LRELH 336
           L+L  N +  SG   L   L   N  + +L L       +   +LA  L+ N S LREL 
Sbjct: 652 LDLKFNQLQDSGVKLLCSGLESPNCKLETLRLWSCSLSEISCGSLASALKSNPSHLRELD 711

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLY 395
           L  N + D G++ L SGL S   KL  L +   S+S      +A  +K N   L  ++L 
Sbjct: 712 LGLNHLQDSGVKLLCSGLESPNCKLKTLGLWRCSLSEISCGSLASALKSNPSHLTELDLG 771

Query: 396 MNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVL-KDN-SVITSLDLAY 452
            N + D G + +  AL+  N  + T+ L G ++      ++A VL K N S +  LDL+ 
Sbjct: 772 DNQLQDSGVKLLCSALESPNCKLETLRLWGCSLSEISCGSLASVLSKSNFSHLRELDLSD 831

Query: 453 NPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANG 510
           N +   G K L   L+  +  + TL L  C I       +A  L+ N + +  LDL  N 
Sbjct: 832 NQLQDSGMKLLCSGLESPNCKLETLFLWSCSISEISCGSLASALKSNPSHLKELDLSCNK 891

Query: 511 LRDEGAKCLAQSFKVVNEALTSI 533
           L+D G K L+   K  N  L ++
Sbjct: 892 LQDSGVKLLSDLVKSPNYRLETL 914


>gi|168986655|ref|NP_919263.2| uncharacterized protein C14orf166B [Homo sapiens]
 gi|308153427|sp|Q0VAA2.2|CN16B_HUMAN RecName: Full=Uncharacterized protein C14orf166B
          Length = 488

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    N S+I SL L+GN      A  L + L  N  +++L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYQIKKL 223

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 224 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 282

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ NR +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 283 MNGFGNEVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 456 GADGA 460
             DGA
Sbjct: 343 NMDGA 347



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 133/267 (49%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 168

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  ++ A  +  AL  N  I  +DL  N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYQIKKLDLSHN 228

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 229 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 288

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
             A  + ++LR N  +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 289 EVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISKGLES-NESLRVLKLFLNPINMDGA 347

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  A+K N    +  L+++N  +++
Sbjct: 348 ILLILAIKRNPKSRMEELDISNVLVSE 374



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 30/264 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 181 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-QIKKLDLSHNQFS-------- 231

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 232 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 272 GNVTLTKLDLSMNGFGNEVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISKGLESNES 331

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           + +L L  N +  +GA  L  + K
Sbjct: 332 LRVLKLFLNPINMDGAILLILAIK 355



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 129/252 (51%), Gaps = 7/252 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +  +   + +E  +S   L+ HG  +G  G +A+   L S    +  L++ +N I  +
Sbjct: 94  GVVPVSYFIRNME--ESYVNLNHHG--LGPRGTKAIAIALVSNMA-VTKLELEDNCIMEE 148

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
           G   + E ++    L  +N+  N +G EGA  I+D  ++N + I +++L GN+     A+
Sbjct: 149 GVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAA 208

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            + + L  N  I  LDL++N     G + L ++L  +  + +L L W      GA  + +
Sbjct: 209 LLCQALSTNYQIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCN 268

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            LR N T++ LDL  NG  +E A  L +  + +N  L  +D+  N+I ++GA  I++ L+
Sbjct: 269 GLRGNVTLTKLDLSMNGFGNEVALALGEVLR-LNRCLVYLDIGGNDIGNEGASKISKGLE 327

Query: 554 ANEDVAVTSLNL 565
           +NE + V  L L
Sbjct: 328 SNESLRVLKLFL 339



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYQIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 228 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L   +  L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEVALALGEVLRLNRC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 DSAALLCQALSTNYQIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  N  +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375


>gi|428320905|ref|YP_007118787.1| leucine-rich repeat, ribonuclease inhibitor subtype [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244585|gb|AFZ10371.1| leucine-rich repeat, ribonuclease inhibitor subtype [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 387

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 145/304 (47%), Gaps = 19/304 (6%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L    +G  G   +   L +N  +  L L +  + D GA+ +A L++ N+ L ++ L 
Sbjct: 55  LDLCKQDLGVMGCHLVTQALANNDAIASLLLGTNGIGDRGAQDVARLIQRNNRLEIVYLG 114

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  +LA AL +N +I  L L  N  G  GA+ LA+ L  N S+R L L    I
Sbjct: 115 CNAISSTGIAALAAALTQNQSITGLWLKRNPIGPEGADRLAEMLRHNTSIRTLDLVNTQI 174

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GDEG+ A++  L+     +  L +G N I    A  +A  + +   +  + L +N +GD 
Sbjct: 175 GDEGLAAILEVLTYTNRTVERLYLGGNQIQENHAALLANLLADNPVITGLFLNVNHLGDR 234

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP-IGADGAK 461
           G   + D L +N+T+  + L  N I   G + +   +  +  +++LDL Y+P  G  GA+
Sbjct: 235 GVTVLVDGLAENKTLVDLGLASNGIGVAGCNPLLAAVATHPKLSNLDLGYSPSTGVLGAQ 294

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
                               QIG  GA  +A  +  N T+  L+L  NG+ + G K L  
Sbjct: 295 P------------------NQIGDIGASAIAHSIARNQTLLKLNLCRNGIGNLGKKALIA 336

Query: 522 SFKV 525
           + ++
Sbjct: 337 ALEI 340



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 128/274 (46%), Gaps = 13/274 (4%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A +S+ +     GD G   +A  +  N   E V    N I++ GI A    L  N ++  
Sbjct: 79  AIASLLLGTNGIGDRGAQDVARLIQRNNRLEIVYLGCNAISSTGIAALAAALTQNQSITG 138

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLEL 281
           L L  NPIG EG   L ++L  N  +  L L +  + DEG  AI E+L   N  +  L L
Sbjct: 139 LWLKRNPIGPEGADRLAEMLRHNTSIRTLDLVNTQIGDEGLAAILEVLTYTNRTVERLYL 198

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I  +    LA  L +N  I  L LN N+ G  G   L  GL  NK+L +L L  N 
Sbjct: 199 GGNQIQENHAALLANLLADNPVITGLFLNVNHLGDRGVTVLVDGLAENKTLVDLGLASNG 258

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIG-----------NNSISAKGAFHVAEYIKNCKSLL 390
           IG  G   L++ +++   KL+ LD+G            N I   GA  +A  I   ++LL
Sbjct: 259 IGVAGCNPLLAAVATHP-KLSNLDLGYSPSTGVLGAQPNQIGDIGASAIAHSIARNQTLL 317

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            +NL  N IG+ G + +  AL+ N+ +  + L G
Sbjct: 318 KLNLCRNGIGNLGKKALIAALEINQKLRYLILDG 351



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 138/282 (48%), Gaps = 16/282 (5%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +G + + + L  N ++  L L  N IGD G +  ++ L  R  +L ++ +G N+IS+ 
Sbjct: 63  GVMGCHLVTQALANNDAIASLLLGTNGIGDRGAQD-VARLIQRNNRLEIVYLGCNAISST 121

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   +A  +   +S+  + L  N IG EGA+++A+ L+ N +I T+DL    I  +G +A
Sbjct: 122 GIAALAAALTQNQSITGLWLKRNPIGPEGADRLAEMLRHNTSIRTLDLVNTQIGDEGLAA 181

Query: 435 IARVLK-DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           I  VL   N  +  L L  N I  + A  L+ +L  +  I  L L    +G  G   + D
Sbjct: 182 ILEVLTYTNRTVERLYLGGNQIQENHAALLANLLADNPVITGLFLNVNHLGDRGVTVLVD 241

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF-----------NEIRD 542
            L  N T+  L L +NG+   G   L  +    +  L+++DL +           N+I D
Sbjct: 242 GLAENKTLVDLGLASNGIGVAGCNPLLAAV-ATHPKLSNLDLGYSPSTGVLGAQPNQIGD 300

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
            GA AIA ++  N+   +  LNL  N +   G+ AL  A ++
Sbjct: 301 IGASAIAHSIARNQ--TLLKLNLCRNGIGNLGKKALIAALEI 340



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 2/189 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L   D+G  G   +  AL  N  I ++ LG N I  +GA  +AR+++ N+ +  + L 
Sbjct: 55  LDLCKQDLGVMGCHLVTQALANNDAIASLLLGTNGIGDRGAQDVARLIQRNNRLEIVYLG 114

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I + G  AL+  L  + +I  L L    IG  GA+ +A+MLR+N +I  LDL    +
Sbjct: 115 CNAISSTGIAALAAALTQNQSITGLWLKRNPIGPEGADRLAEMLRHNTSIRTLDLVNTQI 174

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            DEG   + +     N  +  + L  N+I+++ A  +A  L  N    +T L L  N L 
Sbjct: 175 GDEGLAAILEVLTYTNRTVERLYLGGNQIQENHAALLANLLADNP--VITGLFLNVNHLG 232

Query: 572 KFGQSALTD 580
             G + L D
Sbjct: 233 DRGVTVLVD 241



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 91/215 (42%), Gaps = 14/215 (6%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGI 207
           E    L E  +   +  ++D+     GDEGL  + E L Y N+T E +    N I     
Sbjct: 149 EGADRLAEMLRHNTSIRTLDLVNTQIGDEGLAAILEVLTYTNRTVERLYLGGNQIQENHA 208

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
                +L  N  +  L L+ N +GD GV  L D L +N  +  L L+S  +   G   + 
Sbjct: 209 ALLANLLADNPVITGLFLNVNHLGDRGVTVLVDGLAENKTLVDLGLASNGIGVAGCNPLL 268

Query: 268 ELLKNNSILRVLEL-----------NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
             +  +  L  L+L             N I   G +++A ++  N T+  L+L  N  G 
Sbjct: 269 AAVATHPKLSNLDLGYSPSTGVLGAQPNQIGDIGASAIAHSIARNQTLLKLNLCRNGIGN 328

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           LG  AL   LE N+ LR L L G    D  I  L+
Sbjct: 329 LGKKALIAALEINQKLRYLILDGQP--DRRIEVLL 361


>gi|320169484|gb|EFW46383.1| protein kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 1064

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 176/402 (43%), Gaps = 35/402 (8%)

Query: 155 NEFAKELRAFSSVDMSGR------NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           +E+ +E R   S    GR        G +G   +AE L  N T   +    N I   G  
Sbjct: 33  HEWQQEDRRVPSQKDQGRARFRDQEMGPKGAHVIAEELKVNTTLVALGLYNNDIGPVGAN 92

Query: 209 AFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
               VL +  + L  L L  N IGDEG   +   L +N  + +L L++  + + GA+A+A
Sbjct: 93  ELATVLGTESSRLAILALFENHIGDEGAIAMALALKNNKTLTQLYLANNKIGEVGARALA 152

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             L+ NS L  L L+ N I  +G  ++AEAL  N+++  L+L+ N  G  GA A+A  L 
Sbjct: 153 LALQTNSSLTGLSLHENSIGDAGALAIAEALAVNTSMTELYLHTNGIGDPGAIAIATALT 212

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK--GAFHVAEYIKN 385
            NK+L  L L  N+IG  G   + + L   +  L  LD+G N I +     F      K 
Sbjct: 213 KNKTLTRLALEQNNIGKAGAEKIAAALKENES-LTELDLGENEIPSDVVKKFKAPSDKKK 271

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI----DLGGNNIHSK-----GASAIA 436
           C   L              +K A  ++   +I +I      G  N+ SK        AI+
Sbjct: 272 CTIRL------------DHQKSASVVQSEPSIVSIVGKATSGSLNLESKKIAELAMEAIS 319

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVL---KFHGNINTLKLGWCQIGASGAEFVAD 493
           R +  N  IT ++L  N +   GA+ L E L   K H N+ +L L    IG  G   +  
Sbjct: 320 RAIVTNGTITKMNLKNNTLADIGARLLVENLVDSKLHLNLVSLNLDSNNIGNDGMGHLCK 379

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
           +L   + +  L L  N + D GA+ +A +          ++L
Sbjct: 380 LLE-GSALQELSLNHNWIGDAGAQAIASTLTATTRKFDQMEL 420



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 144/292 (49%), Gaps = 28/292 (9%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA+ +A+ L+ N +L  L L+ N IG  G   L + L +   +LA+L +  N I  +
Sbjct: 59  GPKGAHVIAEELKVNTTLVALGLYNNDIGPVGANELATVLGTESSRLAILALFENHIGDE 118

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A  +KN K+L  + L  N IG+ GA  +A AL+ N ++T + L  N+I   GA A
Sbjct: 119 GAIAMALALKNNKTLTQLYLANNKIGEVGARALALALQTNSSLTGLSLHENSIGDAGALA 178

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  L  N+ +T L L  N IG  GA A++  L  +  +  L L    IG +GAE +A  
Sbjct: 179 IAEALAVNTSMTELYLHTNGIGDPGAIAIATALTKNKTLTRLALEQNNIGKAGAEKIAAA 238

Query: 495 LRYNNTISILDLRANGL----------RDEGAKC-----------LAQS----FKVVNEA 529
           L+ N +++ LDL  N +            +  KC           + QS      +V +A
Sbjct: 239 LKENESLTELDLGENEIPSDVVKKFKAPSDKKKCTIRLDHQKSASVVQSEPSIVSIVGKA 298

Query: 530 LT-SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
            + S++L   +I +    AI++A+  N    +T +NL NN L   G   L +
Sbjct: 299 TSGSLNLESKKIAELAMEAISRAIVTNG--TITKMNLKNNTLADIGARLLVE 348


>gi|338719804|ref|XP_001916614.2| PREDICTED: uncharacterized protein C14orf166B-like [Equus caballus]
          Length = 506

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 147/288 (51%), Gaps = 9/288 (3%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++  L L  N I  EGI +L   L      L  L++
Sbjct: 112 VNLNHHGLGPRGTKAIAIALVSNTAVMTLELEDNCIMAEGIVSLTQMLRENY-YLQELNL 170

Query: 367 GNNSISAKGAFHVAEYI-KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +N +  +GA  ++E++ +N  SL  + L  N+  DE AE ++ AL  +  I ++DL  N
Sbjct: 171 SDNDLGLEGARIISEFLQRNTSSLSNLQLSGNNFKDEAAELLSQALSSDYRIKSLDLSHN 230

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               KG   + ++L  N  + SLDL++N     GA AL   L+ +  +  L +     G 
Sbjct: 231 QFSDKGGEHLGQMLALNVGLQSLDLSWNHFYTRGAVALCNGLRTNVTLKKLDVSMNGFGN 290

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + D+LR NN+++ LD+  N + +EG   +++  + +N++L  + L  N +  DGA
Sbjct: 291 EGATALGDVLRLNNSLAYLDVSGNDISNEGVSKISRGLE-LNDSLKVLKLFLNPMSMDGA 349

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKF------GQSALTDAKDLVYE 587
             +  ++K N   ++  L+++N  +++       G  A+    D+VY+
Sbjct: 350 VLLILSIKRNPKSSMEELDISNVLVSEQFVKTLDGVYAVHPQLDVVYK 397



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 129/275 (46%), Gaps = 28/275 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+ TL L  N I  EG+  L  +L +N  +
Sbjct: 106 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVMTLELEDNCIMAEGIVSLTQMLRENYYL 165

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + L LS  DL  EGA+ I+E L+ N+                           S++ +L 
Sbjct: 166 QELNLSDNDLGLEGARIISEFLQRNT---------------------------SSLSNLQ 198

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+GN      A  L++ L  +  ++ L L  N   D+G   L   L+   G L  LD+  
Sbjct: 199 LSGNNFKDEAAELLSQALSSDYRIKSLDLSHNQFSDKGGEHLGQMLALNVG-LQSLDLSW 257

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N    +GA  +   ++   +L  +++ MN  G+EGA  + D L+ N ++  +D+ GN+I 
Sbjct: 258 NHFYTRGAVALCNGLRTNVTLKKLDVSMNGFGNEGATALGDVLRLNNSLAYLDVSGNDIS 317

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           ++G S I+R L+ N  +  L L  NP+  DGA  L
Sbjct: 318 NEGVSKISRGLELNDSLKVLKLFLNPMSMDGAVLL 352



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 136/264 (51%), Gaps = 2/264 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N     +    N I A GI +   +L+ N  L+ LN
Sbjct: 110 SYVNLNHHGLGPRGTKAIAIALVSNTAVMTLELEDNCIMAEGIVSLTQMLRENYYLQELN 169

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           LS N +G EG + + + L  N + +  LQLS  + +DE A+ +++ L ++  ++ L+L++
Sbjct: 170 LSDNDLGLEGARIISEFLQRNTSSLSNLQLSGNNFKDEAAELLSQALSSDYRIKSLDLSH 229

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  ++SL L+ N+    GA AL  GL  N +L++L +  N  G
Sbjct: 230 NQFSDKGGEHLGQMLALNVGLQSLDLSWNHFYTRGAVALCNGLRTNVTLKKLDVSMNGFG 289

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      LA LD+  N IS +G   ++  ++   SL  + L++N +  +G
Sbjct: 290 NEGATALGDVL-RLNNSLAYLDVSGNDISNEGVSKISRGLELNDSLKVLKLFLNPMSMDG 348

Query: 404 AEKIADALKQNRTITTIDLGGNNI 427
           A  +  ++K+N   +  +L  +N+
Sbjct: 349 AVLLILSIKRNPKSSMEELDISNV 372



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 5/208 (2%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N  + T++L  N I ++G  +
Sbjct: 96  GVVPVSYFIRNMEES-YVNLNHHGLGPRGTKAIAIALVSNTAVMTLELEDNCIMAEGIVS 154

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVAD 493
           + ++L++N  +  L+L+ N +G +GA+ +SE L+ +  +++ L+L         AE ++ 
Sbjct: 155 LTQMLRENYYLQELNLSDNDLGLEGARIISEFLQRNTSSLSNLQLSGNNFKDEAAELLSQ 214

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L  +  I  LDL  N   D+G + L Q    +N  L S+DL++N     GA A+   L+
Sbjct: 215 ALSSDYRIKSLDLSHNQFSDKGGEHLGQML-ALNVGLQSLDLSWNHFYTRGAVALCNGLR 273

Query: 554 ANEDVAVTSLNLANNFLTKFGQSALTDA 581
            N  V +  L+++ N     G +AL D 
Sbjct: 274 TN--VTLKKLDVSMNGFGNEGATALGDV 299



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 17/269 (6%)

Query: 149 ESKQTLNEF-AKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + ++EF  +   + S++ +SG NF DE    L+++L  +   + +  + N  +  G 
Sbjct: 178 EGARIISEFLQRNTSSLSNLQLSGNNFKDEAAELLSQALSSDYRIKSLDLSHNQFSDKGG 237

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N+ L++L+LS N     G   LC+ L  N  +++L +S     +EGA A+ 
Sbjct: 238 EHLGQMLALNVGLQSLDLSWNHFYTRGAVALCNGLRTNVTLKKLDVSMNGFGNEGATALG 297

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           ++L+ N+ L  L+++ N I   G + ++  L  N +++ L L  N     GA  L   ++
Sbjct: 298 DVLRLNNSLAYLDVSGNDISNEGVSKISRGLELNDSLKVLKLFLNPMSMDGAVLLILSIK 357

Query: 328 GNK--SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
            N   S+ EL +    + ++ ++ L  G+ +   +L V+      +SAK A         
Sbjct: 358 RNPKSSMEELDISNVLVSEQFVKTL-DGVYAVHPQLDVVYKAVQGLSAKKAV-------- 408

Query: 386 CKSLLWINLY--MNDIGDEGAEKIADALK 412
              LLW N    +    D+    + D LK
Sbjct: 409 ---LLWTNPMKLIQSYADQHKITVVDFLK 434


>gi|326434835|gb|EGD80405.1| hypothetical protein PTSG_11050 [Salpingoeca sp. ATCC 50818]
          Length = 1515

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 102/172 (59%), Gaps = 6/172 (3%)

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            S+ D+ IRA+ + +  ++       +G++ + A     VA+ +K+   L  ++L  N I
Sbjct: 27  KSVKDK-IRAIANNMCGKEVDFYGAGLGDSGVKA-----VAQALKDNTCLNKLDLNYNAI 80

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            D GA  +A+ LK N T+ T+ L  N+I  KGA A+A +LK N+ +TSL L  NPIG +G
Sbjct: 81  SDAGASALAEMLKHNATMPTLYLHNNSIGGKGAVALAEMLKHNTTMTSLILGINPIGDEG 140

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           A AL+EVLK +  + TL LG   IG  GA  +A+ML++N  + IL LR N +
Sbjct: 141 AVALAEVLKHNTTMTTLGLGQNSIGDPGAVALAEMLKHNTALDILSLRKNSI 192



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 91/162 (56%), Gaps = 3/162 (1%)

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           A+  N     +D  G  +   G  A+A+ LKDN+ +  LDL YN I   GA AL+E+LK 
Sbjct: 35  AIANNMCGKEVDFYGAGLGDSGVKAVAQALKDNTCLNKLDLNYNAISDAGASALAEMLKH 94

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +  + TL L    IG  GA  +A+ML++N T++ L L  N + DEGA  LA+  K  N  
Sbjct: 95  NATMPTLYLHNNSIGGKGAVALAEMLKHNTTMTSLILGINPIGDEGAVALAEVLK-HNTT 153

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +T++ L  N I D GA A+A+ LK N   A+  L+L  N +T
Sbjct: 154 MTTLGLGQNSIGDPGAVALAEMLKHN--TALDILSLRKNSIT 193



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 1/149 (0%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++ Y   +GD G + +A ALK N  +  +DL  N I   GASA+A +LK N+ + +L L 
Sbjct: 45  VDFYGAGLGDSGVKAVAQALKDNTCLNKLDLNYNAISDAGASALAEMLKHNATMPTLYLH 104

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA AL+E+LK +  + +L LG   IG  GA  +A++L++N T++ L L  N +
Sbjct: 105 NNSIGGKGAVALAEMLKHNTTMTSLILGINPIGDEGAVALAEVLKHNTTMTTLGLGQNSI 164

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            D GA  LA+  K  N AL  + L  N I
Sbjct: 165 GDPGAVALAEMLK-HNTALDILSLRKNSI 192



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 92/155 (59%), Gaps = 1/155 (0%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + +  N   +E+  +G  +GD G++A+   L      L  LD+  N+IS  GA  +AE +
Sbjct: 34  RAIANNMCGKEVDFYGAGLGDSGVKAVAQALKDNTC-LNKLDLNYNAISDAGASALAEML 92

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           K+  ++  + L+ N IG +GA  +A+ LK N T+T++ LG N I  +GA A+A VLK N+
Sbjct: 93  KHNATMPTLYLHNNSIGGKGAVALAEMLKHNTTMTSLILGINPIGDEGAVALAEVLKHNT 152

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            +T+L L  N IG  GA AL+E+LK +  ++ L L
Sbjct: 153 TMTTLGLGQNSIGDPGAVALAEMLKHNTALDILSL 187



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 1/160 (0%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           L D G KA+A+ LK+N+ L  L+LN N I  +G ++LAE L  N+T+ +L+L+ N  G  
Sbjct: 52  LGDSGVKAVAQALKDNTCLNKLDLNYNAISDAGASALAEMLKHNATMPTLYLHNNSIGGK 111

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA ALA+ L+ N ++  L L  N IGDEG  AL   L      +  L +G NSI   GA 
Sbjct: 112 GAVALAEMLKHNTTMTSLILGINPIGDEGAVALAEVL-KHNTTMTTLGLGQNSIGDPGAV 170

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
            +AE +K+  +L  ++L  N I   G   +  AL QNRT+
Sbjct: 171 ALAEMLKHNTALDILSLRKNSITPAGGAALGAALDQNRTL 210



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 88/167 (52%), Gaps = 29/167 (17%)

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           SG  ++A+AL +N+ +  L LN N     GA+ALA+ L+ N ++  L+LH NSIG     
Sbjct: 55  SGVKAVAQALKDNTCLNKLDLNYNAISDAGASALAEMLKHNATMPTLYLHNNSIG----- 109

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
                                    KGA  +AE +K+  ++  + L +N IGDEGA  +A
Sbjct: 110 ------------------------GKGAVALAEMLKHNTTMTSLILGINPIGDEGAVALA 145

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           + LK N T+TT+ LG N+I   GA A+A +LK N+ +  L L  N I
Sbjct: 146 EVLKHNTTMTTLGLGQNSIGDPGAVALAEMLKHNTALDILSLRKNSI 192



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 86/158 (54%)

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           ++  N   +EV F   G+  +G+KA    L+ N  L  L+L+ N I D G   L ++L  
Sbjct: 35  AIANNMCGKEVDFYGAGLGDSGVKAVAQALKDNTCLNKLDLNYNAISDAGASALAEMLKH 94

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           NA +  L L +  +  +GA A+AE+LK+N+ +  L L  N I   G  +LAE L  N+T+
Sbjct: 95  NATMPTLYLHNNSIGGKGAVALAEMLKHNTTMTSLILGINPIGDEGAVALAEVLKHNTTM 154

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +L L  N  G  GA ALA+ L+ N +L  L L  NSI
Sbjct: 155 TTLGLGQNSIGDPGAVALAEMLKHNTALDILSLRKNSI 192



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 88/175 (50%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD  G   GD G+  +A++L  N    ++    N I+ AG  A   +L+ N  + TL L 
Sbjct: 45  VDFYGAGLGDSGVKAVAQALKDNTCLNKLDLNYNAISDAGASALAEMLKHNATMPTLYLH 104

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IG +G   L ++L  N  +  L L    + DEGA A+AE+LK+N+ +  L L  N I
Sbjct: 105 NNSIGGKGAVALAEMLKHNTTMTSLILGINPIGDEGAVALAEVLKHNTTMTTLGLGQNSI 164

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
              G  +LAE L  N+ +  L L  N     G  AL   L+ N++L+ L +  NS
Sbjct: 165 GDPGAVALAEMLKHNTALDILSLRKNSITPAGGAALGAALDQNRTLKRLWVCKNS 219



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 7/169 (4%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K+    + +D++     D G   LAE L +N T   +    N I   G  A   +L+ N 
Sbjct: 65  KDNTCLNKLDLNYNAISDAGASALAEMLKHNATMPTLYLHNNSIGGKGAVALAEMLKHNT 124

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            + +L L  NPIGDEG   L ++L  N  +  L L    + D GA A+AE+LK+N+ L +
Sbjct: 125 TMTSLILGINPIGDEGAVALAEVLKHNTTMTTLGLGQNSIGDPGAVALAEMLKHNTALDI 184

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN-------YGGALGAN 320
           L L  N I  +G  +L  AL +N T++ L +  N       +G AL  +
Sbjct: 185 LSLRKNSITPAGGAALGAALDQNRTLKRLWVCKNSPATARAFGAALPVD 233



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 3/144 (2%)

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           R + +N     +D     +G  G KA+++ LK +  +N L L +  I  +GA  +A+ML+
Sbjct: 34  RAIANNMCGKEVDFYGAGLGDSGVKAVAQALKDNTCLNKLDLNYNAISDAGASALAEMLK 93

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           +N T+  L L  N +  +GA  LA+  K  N  +TS+ L  N I D+GA A+A+ LK N 
Sbjct: 94  HNATMPTLYLHNNSIGGKGAVALAEMLK-HNTTMTSLILGINPIGDEGAVALAEVLKHN- 151

Query: 557 DVAVTSLNLANNFLTKFGQSALTD 580
              +T+L L  N +   G  AL +
Sbjct: 152 -TTMTTLGLGQNSIGDPGAVALAE 174


>gi|217074422|gb|ACJ85571.1| unknown [Medicago truncatula]
          Length = 533

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 176/380 (46%), Gaps = 38/380 (10%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVS---FAANGITAAGIKA---FDGVLQ 215
           +F+++  S R+FG +    +   L       +EV    F A    A  I+    F   L+
Sbjct: 153 SFTNICFSNRSFGLDAAHVVEPMLISIKDQLKEVDLSDFIAGRPEAEAIEVMNIFSSALE 212

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
             + L+ LNLS N +G++GV+    +L     +E L L +  + +E AKA+AEL+     
Sbjct: 213 GAV-LRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPFTEK 271

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+VL  +NNM    G  ++A+ +  +  +     +    GA G  ALA+ L     L++L
Sbjct: 272 LKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKL 331

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N  G E   AL                             ++ I     L  I L 
Sbjct: 332 DLRDNMFGVEAGVAL-----------------------------SKVIPVFADLTEIYLS 362

Query: 396 MNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             ++ D+GAE +A+ALK++  ++  +D+ GN+I +K A ++A  +     +T L+L+ N 
Sbjct: 363 YLNLEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENE 422

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +  +GA  +S+ L+  G ++ + L    I  SGA+ +A+ +       +L++ AN + DE
Sbjct: 423 LKDEGAGLISKALEGLGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNVNANFISDE 482

Query: 515 GAKCLAQSFKVVNEALTSID 534
           G   L   FK   + L  +D
Sbjct: 483 GIDELKDIFKNSPDILGPLD 502



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 32/271 (11%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG   LR L+L  N++G++G+RA  + L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSSALEG-AVLRHLNLSNNAMGEKGVRAFRALLKSQ-NDLEELYLMNDGISEEAAKAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE I   + L  ++ + N  GDEGA  IAD                            V+
Sbjct: 263 AELIPFTEKLKVLHFHNNMTGDEGAFAIAD----------------------------VM 294

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           K +  +     +   +GA+G  AL+E L    ++  L L     G      ++ ++    
Sbjct: 295 KRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFA 354

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
            ++ + L    L D+GA+ LA + K    +L  +D+A N+I    A ++A+ + + +   
Sbjct: 355 DLTEIYLSYLNLEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQ--F 412

Query: 560 VTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
           +T LNL+ N L   G   ++ A + + ++SE
Sbjct: 413 LTKLNLSENELKDEGAGLISKALEGLGQLSE 443


>gi|348551037|ref|XP_003461337.1| PREDICTED: ribonuclease inhibitor-like [Cavia porcellus]
          Length = 611

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 178/387 (45%), Gaps = 17/387 (4%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG 227
           +S    GD G+  + + L       + +S    G+T  G      VL S   L+ L LSG
Sbjct: 213 LSTNELGDAGVHLVLQGLQSPTCKIQSLSLPYCGLTETGCGILPSVLPSMPTLRELRLSG 272

Query: 228 NPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           N +GD G++ L   L+D    +E+L L    L D   + +A +L+  + ++ L ++NN I
Sbjct: 273 NSLGDGGLRLLSRGLLDAQCHLEKLHLDYCSLSDASCEPLASMLRAKTNIKKLVMSNNDI 332

Query: 287 DYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
             +G   L   L +++  + +L L      A     L   +    SL++L L  N +GD 
Sbjct: 333 HEAGIRMLLSGLKDSACPLETLWLENCGVTAATCKDLCDVVAAKPSLQDLDLGNNRLGDA 392

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+  L S L     +L  L +    I+ +G  ++ + +   +SL  ++L +N +GDEGA 
Sbjct: 393 GLAVLCSQLLHPSCRLRKLWLWECDITTEGCKNLCQVLMAKQSLKALSLMLNRLGDEGAR 452

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIA-----RVLKDNSVITSLDLAYNPIGADGA 460
            + +AL++     T  L    +   G +A        VL  N  +T L L+ N +G  G 
Sbjct: 453 LLCEALRE----PTCQLECLWVKECGFTAACCPYFREVLAQNKFLTELLLSENNLGNTGV 508

Query: 461 KALSEVLKFHGNI-NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           + L + L   G++   L+L  C +  S    +A +L   +++  LDL  NGL D G   L
Sbjct: 509 QELCQALCQPGSVLQVLELVDCNLTNSSCSNLALVLLACHSLRELDLSNNGLGDPGVLQL 568

Query: 520 AQSFK---VVNEALTSIDLAF-NEIRD 542
            +S +      E L   D+   +E+RD
Sbjct: 569 VESLRQPSCTLECLLLFDIYVSDEVRD 595



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 167/402 (41%), Gaps = 6/402 (1%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK-CLCDIL 242
           E L   Q  + V     G+T    +     LQ+N  L  L LS N +GD GV   L  + 
Sbjct: 172 ELLPLIQQHQVVRLQDCGLTEERCRDISSALQANPTLIELCLSTNELGDAGVHLVLQGLQ 231

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI-DYSGFTSLAEALLEN 301
                ++ L L    L + G   +  +L +   LR L L+ N + D          L   
Sbjct: 232 SPTCKIQSLSLPYCGLTETGCGILPSVLPSMPTLRELRLSGNSLGDGGLRLLSRGLLDAQ 291

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +  LHL+           LA  L    ++++L +  N I + GIR L+SGL      L
Sbjct: 292 CHLEKLHLDYCSLSDASCEPLASMLRAKTNIKKLVMSNNDIHEAGIRMLLSGLKDSACPL 351

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITTI 420
             L + N  ++A     + + +    SL  ++L  N +GD G A   +  L  +  +  +
Sbjct: 352 ETLWLENCGVTAATCKDLCDVVAAKPSLQDLDLGNNRLGDAGLAVLCSQLLHPSCRLRKL 411

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLG 479
            L   +I ++G   + +VL     + +L L  N +G +GA+ L E L+     +  L + 
Sbjct: 412 WLWECDITTEGCKNLCQVLMAKQSLKALSLMLNRLGDEGARLLCEALREPTCQLECLWVK 471

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
            C   A+   +  ++L  N  ++ L L  N L + G + L Q+       L  ++L    
Sbjct: 472 ECGFTAACCPYFREVLAQNKFLTELLLSENNLGNTGVQELCQALCQPGSVLQVLELVDCN 531

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           + +     +A  L A    ++  L+L+NN L   G   L ++
Sbjct: 532 LTNSSCSNLALVLLACH--SLRELDLSNNGLGDPGVLQLVES 571



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 33/234 (14%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +   +D+     GD GL  L   L +      ++      IT  G K    VL +  +LK
Sbjct: 378 SLQDLDLGNNRLGDAGLAVLCSQLLHPSCRLRKLWLWECDITTEGCKNLCQVLMAKQSLK 437

Query: 222 TLNLSGNPIGDEGVKCLCD-----------------------------ILVDNAGVERLQ 252
            L+L  N +GDEG + LC+                             +L  N  +  L 
Sbjct: 438 ALSLMLNRLGDEGARLLCEALREPTCQLECLWVKECGFTAACCPYFREVLAQNKFLTELL 497

Query: 253 LSSVDLRDEGAKAIAE-LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           LS  +L + G + + + L +  S+L+VLEL +  +  S  ++LA  LL   ++R L L+ 
Sbjct: 498 LSENNLGNTGVQELCQALCQPGSVLQVLELVDCNLTNSSCSNLALVLLACHSLRELDLSN 557

Query: 312 NYGGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           N  G  G   L + L + + +L  L L    + DE +R  +  L   K  L ++
Sbjct: 558 NGLGDPGVLQLVESLRQPSCTLECLLLFDIYVSDE-VRDQLEALEKEKPPLRII 610


>gi|297298317|ref|XP_002805175.1| PREDICTED: uncharacterized protein C14orf166B-like [Macaca mulatta]
          Length = 488

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 168

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  +E A  +  AL  N  I  +DL  N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHN 228

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 229 QFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGN 288

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 289 EGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLES-NESLRVLKLFLNPISMDGA 347

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  A+K N    +  L+++N  +++
Sbjct: 348 ILLILAIKRNPKSRMEELDISNVLVSE 374



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 30/264 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   +E    L   LS+   ++  LD+ +N  S        
Sbjct: 181 ISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNY-RIKKLDLSHNQFS-------- 231

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E++   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 232 --------------------DIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N +G +GA AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 272 GNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNES 331

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           + +L L  N +  +GA  L  + K
Sbjct: 332 LRVLKLFLNPISMDGAILLILAIK 355



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D ++E A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N +G
Sbjct: 228 NQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+G N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEGAVALGEVLRLNSC-LVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKL 223

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 224 DLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 282

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N +  +GA  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 283 MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 343 SMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 393



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 ESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N +   G  +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375


>gi|355693464|gb|EHH28067.1| hypothetical protein EGK_18408 [Macaca mulatta]
 gi|355778755|gb|EHH63791.1| hypothetical protein EGM_16831 [Macaca fascicularis]
          Length = 488

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 168

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  +E A  +  AL  N  I  +DL  N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHN 228

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 229 QFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGN 288

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 289 EGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLES-NESLRVLKLFLNPISMDGA 347

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  A+K N    +  L+++N  +++
Sbjct: 348 ILLILAIKRNPKSRMEELDISNVLVSE 374



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 30/264 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   +E    L   LS+   ++  LD+ +N  S        
Sbjct: 181 ISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNY-RIKKLDLSHNQFS-------- 231

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E++   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 232 --------------------DIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N +G +GA AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 272 GNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNES 331

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           + +L L  N +  +GA  L  + K
Sbjct: 332 LRVLKLFLNPISMDGAILLILAIK 355



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D ++E A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N +G
Sbjct: 228 NQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+G N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEGAVALGEVLRLNSC-LVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKL 223

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 224 DLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 282

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N +  +GA  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 283 MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 343 SMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 393



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 ESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N +   G  +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375


>gi|402876803|ref|XP_003902143.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Papio anubis]
          Length = 488

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 168

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  +E A  +  AL  N  I  +DL  N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHN 228

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 229 QFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGN 288

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 289 EGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLES-NESLRVLKLFLNPISMDGA 347

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  A+K N    +  L+++N  +++
Sbjct: 348 ILLILAIKRNPKSRMEELDISNVLVSE 374



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 30/264 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   +E    L   LS+   ++  LD+ +N  S        
Sbjct: 181 ISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNY-RIKKLDLSHNQFS-------- 231

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E++   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 232 --------------------DIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N +G +GA AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 272 GNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNES 331

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           + +L L  N +  +GA  L  + K
Sbjct: 332 LRVLKLFLNPISMDGAILLILAIK 355



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D ++E A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N +G
Sbjct: 228 NQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+G N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEGAVALGEVLRLNSC-LVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKL 223

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 224 DLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 282

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N +  +GA  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 283 MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 343 SMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 393



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 ESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N +   G  +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375


>gi|56269507|gb|AAH87492.1| LOC496076 protein, partial [Xenopus laevis]
          Length = 425

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 118/242 (48%), Gaps = 33/242 (13%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DE   AL   LS +   +  LD+  N+++  GA H+A +++N  SLL +N+  NDIG 
Sbjct: 71  VSDEDFLALTRVLS-KNCFITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGT 129

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA---------- 451
           +GAE I  AL +N ++ ++ + GN I +KG    A +L+ NS +  LDL           
Sbjct: 130 DGAEHITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLI 189

Query: 452 ---------------------YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
                                +  I  D    LSE+L+ +  +  L L   ++   G + 
Sbjct: 190 ALATVLLQNKTLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQR 249

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           + D L  N  +  LDL  N +  +G KCLA+  K  N+ L  +DLA N + DDGA  +A+
Sbjct: 250 LCDALHENYALKHLDLSCNKITRDGVKCLAEVLK-RNKTLEILDLASNRMEDDGAIYLAE 308

Query: 551 AL 552
           A+
Sbjct: 309 AI 310



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 151/343 (44%), Gaps = 39/343 (11%)

Query: 222 TLNLSGN-------PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           TL L GN        + DE    L  +L  N  +  L L   +L D GA  IA  L+NNS
Sbjct: 56  TLKLCGNNRLVQVQRVSDEDFLALTRVLSKNCFITNLDLRYNNLTDNGAAHIATFLQNNS 115

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L +  N I   G   + +AL  NS++ SL + GN  G  G    A  L+ N SL E
Sbjct: 116 SLLCLNIMGNDIGTDGAEHITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEE 175

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN---NSISAKGAFHVAEYIKNCKSLLW 391
           L L    +G + + AL + L   K  L  +++       I      H++E ++   +L  
Sbjct: 176 LDLGDCDLGIQSLIALATVLLQNK-TLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQE 234

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  +++ D G +++ DAL +N  +  +DL  N I   G   +A VLK N  +  LDLA
Sbjct: 235 LHLSKHEMTDFGVQRLCDALHENYALKHLDLSCNKITRDGVKCLAEVLKRNKTLEILDLA 294

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +  DGA  L+E +                             YN ++  L + +N +
Sbjct: 295 SNRMEDDGAIYLAEAIYL---------------------------YNRSLKALSVVSNSI 327

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           R +G K    +    N  L  I +  N+I ++ + A +  LK+
Sbjct: 328 RGKGLK-ALAAAINANNCLLYIYIWGNKIDEEASVAFSHLLKS 369



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 164/343 (47%), Gaps = 20/343 (5%)

Query: 145 KLFRESKQTLNEFAKELRA--------FSSVDMSGRN-------FGDEGLFFLAESLGYN 189
           ++  E KQ +N F  E+ +         S++ + G N         DE    L   L  N
Sbjct: 27  EMCSEQKQPVNPFIAEILSQTEEQELYASTLKLCGNNRLVQVQRVSDEDFLALTRVLSKN 86

Query: 190 QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVE 249
                +    N +T  G       LQ+N +L  LN+ GN IG +G + +   L  N+ + 
Sbjct: 87  CFITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGTDGAEHITKALHRNSSLL 146

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
            L+++   + ++G    A +L+ NS L  L+L +  +      +LA  LL+N T++S++L
Sbjct: 147 SLRMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLIALATVLLQNKTLKSVNL 206

Query: 310 NGNYGGALGANA---LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           N      +  +    L++ L  N +L+ELHL  + + D G++ L   L      L  LD+
Sbjct: 207 NRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQRLCDALHENYA-LKHLDL 265

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGN 425
             N I+  G   +AE +K  K+L  ++L  N + D+GA  +A+A+   NR++  + +  N
Sbjct: 266 SCNKITRDGVKCLAEVLKRNKTLEILDLASNRMEDDGAIYLAEAIYLYNRSLKALSVVSN 325

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +I  KG  A+A  +  N+ +  + +  N I  + + A S +LK
Sbjct: 326 SIRGKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLLK 368



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 3/252 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++ G + G +G   + ++L  N +   +    N I   G   F  +LQ N +L+ L+L 
Sbjct: 120 LNIMGNDIGTDGAEHITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEELDLG 179

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSS---VDLRDEGAKAIAELLKNNSILRVLELNN 283
              +G + +  L  +L+ N  ++ + L+      ++++    ++E+L+ NS L+ L L+ 
Sbjct: 180 DCDLGIQSLIALATVLLQNKTLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSK 239

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           + +   G   L +AL EN  ++ L L+ N     G   LA+ L+ NK+L  L L  N + 
Sbjct: 240 HEMTDFGVQRLCDALHENYALKHLDLSCNKITRDGVKCLAEVLKRNKTLEILDLASNRME 299

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D+G   L   +      L  L + +NSI  KG   +A  I     LL+I ++ N I +E 
Sbjct: 300 DDGAIYLAEAIYLYNRSLKALSVVSNSIRGKGLKALAAAINANNCLLYIYIWGNKIDEEA 359

Query: 404 AEKIADALKQNR 415
           +   +  LK  R
Sbjct: 360 SVAFSHLLKSGR 371



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 9/213 (4%)

Query: 157 FAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA---NGITAAGIKAF 210
           FA  L+  SS+   D+   + G + L  LA  L  N+T + V+        I        
Sbjct: 163 FASMLQVNSSLEELDLGDCDLGIQSLIALATVLLQNKTLKSVNLNRPLFYVIQEDTTVHL 222

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             +L+ N  L+ L+LS + + D GV+ LCD L +N  ++ L LS   +  +G K +AE+L
Sbjct: 223 SEMLRVNSTLQELHLSKHEMTDFGVQRLCDALHENYALKHLDLSCNKITRDGVKCLAEVL 282

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           K N  L +L+L +N ++  G   LAEA+ L N ++++L +  N     G  ALA  +  N
Sbjct: 283 KRNKTLEILDLASNRMEDDGAIYLAEAIYLYNRSLKALSVVSNSIRGKGLKALAAAINAN 342

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             L  +++ GN I +E   A    L S  G+L+
Sbjct: 343 NCLLYIYIWGNKIDEEASVAFSHLLKS--GRLS 373



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG-YNQTAEEVSFAANGIT 203
           K+ R+  + L E  K  +    +D++     D+G  +LAE++  YN++ + +S  +N I 
Sbjct: 269 KITRDGVKCLAEVLKRNKTLEILDLASNRMEDDGAIYLAEAIYLYNRSLKALSVVSNSIR 328

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD--- 260
             G+KA    + +N  L  + + GN I +E       +L   +G  RL  SS D++    
Sbjct: 329 GKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLL--KSG--RLSSSSTDVQPYVV 384

Query: 261 EGAKAIAELL 270
           +G   +AEL 
Sbjct: 385 DGCACLAELF 394


>gi|407402832|gb|EKF29292.1| hypothetical protein MOQ_006932 [Trypanosoma cruzi marinkellei]
          Length = 447

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 191/382 (50%), Gaps = 12/382 (3%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +++ ++ ++L  N +G E  + +  +L +++ V  + L   ++  EG  A+A ++  ++ 
Sbjct: 60  ADVPVRVVDLIDNQLGPEQTQKIASML-ESSTVRDVLLRYNEIGKEGCDALANVVNVSTK 118

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L++L++  N +  +    L +++  ++ +  L L+ N  G  GA  L + LE N  L+ L
Sbjct: 119 LQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNAYLKSL 178

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N IG  G  ++   L+     L  L +  N +   G   +A  +K  K L  + L 
Sbjct: 179 DLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQLIANAVKGNKCLTDLTLG 238

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNP 454
            N+  D  AE +A+ LK+N T+ T+DL  N + + G   +AR  L +N  + SL L+ NP
Sbjct: 239 NNNATDAAAEALAEMLKENSTLETLDLRSNTLTATGVRILARDGLANNMFLVSLSLSANP 298

Query: 455 IGADGAKALSEVLKFH--GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           IG+ GA  +++ L  H  G +  L L  C++G +G   +A ++    T++ ++L  N L 
Sbjct: 299 IGSVGADEIAKTLIMHQGGALARLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLD 358

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           +E A  L++S        + +DL+ NEI + GA  +  A + N    ++SL L  N + +
Sbjct: 359 NEAAVVLSRSIVNSISI-SIVDLSANEIGEWGASNLIDATQLN--ARISSLLLHGNSINR 415

Query: 573 FGQSALTDA-----KDLVYEMS 589
             Q  L         + VY MS
Sbjct: 416 IVQKRLIHCWVNAFPETVYRMS 437



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 149/308 (48%), Gaps = 3/308 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G EG   LA  +  +   + +    NG+TAA ++     +  + AL  L LS N IG E
Sbjct: 101 IGKEGCDALANVVNVSTKLQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHE 160

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLELNNNMIDYSGFT 292
           G   L   L  NA ++ L LS  ++   GA++IA LL    S L+ L+L  N +  +G  
Sbjct: 161 GAALLFRALEKNAYLKSLDLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQ 220

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +A A+  N  +  L L  N      A ALA+ L+ N +L  L L  N++   G+R L  
Sbjct: 221 LIANAVKGNKCLTDLTLGNNNATDAAAEALAEMLKENSTLETLDLRSNTLTATGVRILAR 280

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              +    L  L +  N I + GA  +A+   +    +L  ++L   ++G  G  +IA  
Sbjct: 281 DGLANNMFLVSLSLSANPIGSVGADEIAKTLIMHQGGALARLDLSSCELGPTGGMRIASL 340

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           +    T+  ++L GN + ++ A  ++R + ++  I+ +DL+ N IG  GA  L +  + +
Sbjct: 341 IAATITLNEVNLSGNQLDNEAAVVLSRSIVNSISISIVDLSANEIGEWGASNLIDATQLN 400

Query: 471 GNINTLKL 478
             I++L L
Sbjct: 401 ARISSLLL 408



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 166/349 (47%), Gaps = 6/349 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+     G E    +A S+  + T  +V    N I   G  A   V+  +  L+ L++ 
Sbjct: 67  VDLIDNQLGPEQTQKIA-SMLESSTVRDVLLRYNEIGKEGCDALANVVNVSTKLQLLDIR 125

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +    V+ L   +  +  + RL LS+  +  EGA  +   L+ N+ L+ L+L+ N I
Sbjct: 126 GNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNAYLKSLDLSLNEI 185

Query: 287 DYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
             SG  S+A  L L  S +++L L GN+ G  G   +A  ++GNK L +L L GN+   +
Sbjct: 186 GPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQLIANAVKGNKCLTDLTL-GNNNATD 244

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGA 404
                ++ +      L  LD+ +N+++A G   +A + + N   L+ ++L  N IG  GA
Sbjct: 245 AAAEALAEMLKENSTLETLDLRSNTLTATGVRILARDGLANNMFLVSLSLSANPIGSVGA 304

Query: 405 EKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           ++IA  L   Q   +  +DL    +   G   IA ++     +  ++L+ N +  + A  
Sbjct: 305 DEIAKTLIMHQGGALARLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVV 364

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           LS  +    +I+ + L   +IG  GA  + D  + N  IS L L  N +
Sbjct: 365 LSRSIVNSISISIVDLSANEIGEWGASNLIDATQLNARISSLLLHGNSI 413


>gi|76779900|gb|AAI06238.1| LOC496076 protein, partial [Xenopus laevis]
          Length = 435

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 118/242 (48%), Gaps = 33/242 (13%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DE   AL   LS +   +  LD+  N+++  GA H+A +++N  SLL +N+  NDIG 
Sbjct: 75  VSDEDFLALTRVLS-KNCFITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGT 133

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA---------- 451
           +GAE I  AL +N ++ ++ + GN I +KG    A +L+ NS +  LDL           
Sbjct: 134 DGAEHITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLI 193

Query: 452 ---------------------YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
                                +  I  D    LSE+L+ +  +  L L   ++   G + 
Sbjct: 194 ALATVLLQNKTLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQR 253

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           + D L  N  +  LDL  N +  +G KCLA+  K  N+ L  +DLA N + DDGA  +A+
Sbjct: 254 LCDALHENYALKHLDLSCNKITRDGVKCLAEVLK-RNKTLEILDLASNRMEDDGAIYLAE 312

Query: 551 AL 552
           A+
Sbjct: 313 AI 314



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 123/259 (47%), Gaps = 11/259 (4%)

Query: 222 TLNLSGN-------PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           TL L GN        + DE    L  +L  N  +  L L   +L D GA  IA  L+NNS
Sbjct: 60  TLKLCGNNRLVQVQRVSDEDFLALTRVLSKNCFITNLDLRYNNLTDNGAAHIATFLQNNS 119

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L +  N I   G   + +AL  NS++ SL + GN  G  G    A  L+ N SL E
Sbjct: 120 SLLCLNIMGNDIGTDGAEHITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEE 179

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN---NSISAKGAFHVAEYIKNCKSLLW 391
           L L    +G + + AL + L   K  L  +++       I      H++E ++   +L  
Sbjct: 180 LDLGDCDLGIQSLIALATVLLQNK-TLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQE 238

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  +++ D G +++ DAL +N  +  +DL  N I   G   +A VLK N  +  LDLA
Sbjct: 239 LHLSKHEMTDFGVQRLCDALHENYALKHLDLSCNKITRDGVKCLAEVLKRNKTLEILDLA 298

Query: 452 YNPIGADGAKALSEVLKFH 470
            N +  DGA  L+E +  +
Sbjct: 299 SNRMEDDGAIYLAEAIYLY 317



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 164/343 (47%), Gaps = 20/343 (5%)

Query: 145 KLFRESKQTLNEFAKELRA--------FSSVDMSGRN-------FGDEGLFFLAESLGYN 189
           ++  E KQ +N F  E+ +         S++ + G N         DE    L   L  N
Sbjct: 31  EMCSEQKQPVNPFIAEILSQTEEQELYASTLKLCGNNRLVQVQRVSDEDFLALTRVLSKN 90

Query: 190 QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVE 249
                +    N +T  G       LQ+N +L  LN+ GN IG +G + +   L  N+ + 
Sbjct: 91  CFITNLDLRYNNLTDNGAAHIATFLQNNSSLLCLNIMGNDIGTDGAEHITKALHRNSSLL 150

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
            L+++   + ++G    A +L+ NS L  L+L +  +      +LA  LL+N T++S++L
Sbjct: 151 SLRMTGNKIGNKGGMLFASMLQVNSSLEELDLGDCDLGIQSLIALATVLLQNKTLKSVNL 210

Query: 310 NGNYGGALGANA---LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           N      +  +    L++ L  N +L+ELHL  + + D G++ L   L      L  LD+
Sbjct: 211 NRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSKHEMTDFGVQRLCDALHENYA-LKHLDL 269

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGN 425
             N I+  G   +AE +K  K+L  ++L  N + D+GA  +A+A+   NR++  + +  N
Sbjct: 270 SCNKITRDGVKCLAEVLKRNKTLEILDLASNRMEDDGAIYLAEAIYLYNRSLKALSVVSN 329

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +I  KG  A+A  +  N+ +  + +  N I  + + A S +LK
Sbjct: 330 SIRGKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLLK 372



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 3/252 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++ G + G +G   + ++L  N +   +    N I   G   F  +LQ N +L+ L+L 
Sbjct: 124 LNIMGNDIGTDGAEHITKALHRNSSLLSLRMTGNKIGNKGGMLFASMLQVNSSLEELDLG 183

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSS---VDLRDEGAKAIAELLKNNSILRVLELNN 283
              +G + +  L  +L+ N  ++ + L+      ++++    ++E+L+ NS L+ L L+ 
Sbjct: 184 DCDLGIQSLIALATVLLQNKTLKSVNLNRPLFYVIQEDTTVHLSEMLRVNSTLQELHLSK 243

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           + +   G   L +AL EN  ++ L L+ N     G   LA+ L+ NK+L  L L  N + 
Sbjct: 244 HEMTDFGVQRLCDALHENYALKHLDLSCNKITRDGVKCLAEVLKRNKTLEILDLASNRME 303

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D+G   L   +      L  L + +NSI  KG   +A  I     LL+I ++ N I +E 
Sbjct: 304 DDGAIYLAEAIYLYNRSLKALSVVSNSIRGKGLKALAAAINANNCLLYIYIWGNKIDEEA 363

Query: 404 AEKIADALKQNR 415
           +   +  LK  R
Sbjct: 364 SVAFSHLLKSGR 375



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG-YNQTAEEVSFAANGIT 203
           K+ R+  + L E  K  +    +D++     D+G  +LAE++  YN++ + +S  +N I 
Sbjct: 273 KITRDGVKCLAEVLKRNKTLEILDLASNRMEDDGAIYLAEAIYLYNRSLKALSVVSNSIR 332

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD--- 260
             G+KA    + +N  L  + + GN I +E       +L   +G  RL  SS D++    
Sbjct: 333 GKGLKALAAAINANNCLLYIYIWGNKIDEEASVAFSHLL--KSG--RLSSSSTDVQPYVV 388

Query: 261 EGAKAIAELL 270
           +G   +AEL 
Sbjct: 389 DGRACLAELF 398


>gi|387018092|gb|AFJ51164.1| Ribonuclease inhibitor-like [Crotalus adamanteus]
          Length = 455

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 176/363 (48%), Gaps = 6/363 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           +++S    GD G+  L + L   N   +++      +T A  +    V+ S  +L  L+L
Sbjct: 56  LNLSNNELGDAGVDALCKGLLNPNCKLQKLWLRNCNLTTACCEKLRSVV-SKSSLTELHL 114

Query: 226 SGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +G  G + LC  LVD++  +E LQL   DL  E   A+  +L   S L++L L+NN
Sbjct: 115 GDNRLGTSGGRTLCQGLVDSSCQLESLQLQFCDLTKENIDALCSVLCVKSSLQMLNLSNN 174

Query: 285 MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +       L +AL++ S+ ++SL L          + L+  L    SL+EL +  N+IG
Sbjct: 175 KLGDEAVKHLCQALVKGSSNLQSLQLESCEITRASCDDLSTFLSSTPSLKELCIGDNNIG 234

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D G+  L  G+ +   KL  L +   +ISA G   +A+ I   ++L  ++L  N + +EG
Sbjct: 235 DAGLAILCQGVQNPNSKLEKLWLWECNISAAGCEELAQIIGTKETLKEMSLLGNPVTNEG 294

Query: 404 AEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            E +   LK  +T + ++ L    + +    +I+  L  NSV+  L L  N IG +G   
Sbjct: 295 VELLCQGLKNPKTKLQSLWLRDCGLTAACCKSISSALSVNSVLKELQLGGNSIGDEGVIE 354

Query: 463 LSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           + E V   + N+ +L LG   + A   + +A ++     +  LD+  + + DEG   L +
Sbjct: 355 ICEGVSSPNCNLESLWLGQSSLTAVCCDALAKLIVEKPCLRELDVSYSQIGDEGVLKLCE 414

Query: 522 SFK 524
           + K
Sbjct: 415 AVK 417



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 185/419 (44%), Gaps = 36/419 (8%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+  + F       L  S+  ++T   +     GI  +  +    +L +N  L  LNLS
Sbjct: 3   LDLQCQEFDTSKWKELVASMNQHKT---IRLDDCGIGISHCEDLSVLLTTNQELIELNLS 59

Query: 227 GNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N +GD GV  LC  L++ N  +++L L + +L     + +  ++  +S L  L L +N 
Sbjct: 60  NNELGDAGVDALCKGLLNPNCKLQKLWLRNCNLTTACCEKLRSVVSKSS-LTELHLGDNR 118

Query: 286 IDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           +  SG  +L + L+++S  + SL L          +AL   L    SL+ L+L  N +GD
Sbjct: 119 LGTSGGRTLCQGLVDSSCQLESLQLQFCDLTKENIDALCSVLCVKSSLQMLNLSNNKLGD 178

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           E ++ L   L      L  L + +  I+      ++ ++ +  SL  + +  N+IGD G 
Sbjct: 179 EAVKHLCQALVKGSSNLQSLQLESCEITRASCDDLSTFLSSTPSLKELCIGDNNIGDAGL 238

Query: 405 EKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             +   ++  N  +  + L   NI + G   +A+++     +  + L  NP+  +G + L
Sbjct: 239 AILCQGVQNPNSKLEKLWLWECNISAAGCEELAQIIGTKETLKEMSLLGNPVTNEGVELL 298

Query: 464 SEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG------- 515
            + LK     + +L L  C + A+  + ++  L  N+ +  L L  N + DEG       
Sbjct: 299 CQGLKNPKTKLQSLWLRDCGLTAACCKSISSALSVNSVLKELQLGGNSIGDEGVIEICEG 358

Query: 516 -------------------AKCLAQSFKVVNE--ALTSIDLAFNEIRDDGAFAIAQALK 553
                              A C     K++ E   L  +D+++++I D+G   + +A+K
Sbjct: 359 VSSPNCNLESLWLGQSSLTAVCCDALAKLIVEKPCLRELDVSYSQIGDEGVLKLCEAVK 417



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 128/269 (47%), Gaps = 6/269 (2%)

Query: 150 SKQTLNEFAKELRAFSSVDM---SGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAA 205
           +K+ ++     L   SS+ M   S    GDE +  L ++L    +  + +   +  IT A
Sbjct: 149 TKENIDALCSVLCVKSSLQMLNLSNNKLGDEAVKHLCQALVKGSSNLQSLQLESCEITRA 208

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAK 264
                   L S  +LK L +  N IGD G+  LC  +   N+ +E+L L   ++   G +
Sbjct: 209 SCDDLSTFLSSTPSLKELCIGDNNIGDAGLAILCQGVQNPNSKLEKLWLWECNISAAGCE 268

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALA 323
            +A+++     L+ + L  N +   G   L + L    T ++SL L      A    +++
Sbjct: 269 ELAQIIGTKETLKEMSLLGNPVTNEGVELLCQGLKNPKTKLQSLWLRDCGLTAACCKSIS 328

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L  N  L+EL L GNSIGDEG+  +  G+SS    L  L +G +S++A     +A+ I
Sbjct: 329 SALSVNSVLKELQLGGNSIGDEGVIEICEGVSSPNCNLESLWLGQSSLTAVCCDALAKLI 388

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALK 412
                L  +++  + IGDEG  K+ +A+K
Sbjct: 389 VEKPCLRELDVSYSQIGDEGVLKLCEAVK 417



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 108/227 (47%), Gaps = 11/227 (4%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGIT 203
           ++ R S   L+ F     +   + +   N GD GL  L + +   N   E++      I+
Sbjct: 204 EITRASCDDLSTFLSSTPSLKELCIGDNNIGDAGLAILCQGVQNPNSKLEKLWLWECNIS 263

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG- 262
           AAG +    ++ +   LK ++L GNP+ +EGV+ LC  L +     + +L S+ LRD G 
Sbjct: 264 AAGCEELAQIIGTKETLKEMSLLGNPVTNEGVELLCQGLKN----PKTKLQSLWLRDCGL 319

Query: 263 ----AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGAL 317
                K+I+  L  NS+L+ L+L  N I   G   + E +   N  + SL L  +   A+
Sbjct: 320 TAACCKSISSALSVNSVLKELQLGGNSIGDEGVIEICEGVSSPNCNLESLWLGQSSLTAV 379

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
             +ALAK +     LREL +  + IGDEG+  L   + +    L  L
Sbjct: 380 CCDALAKLIVEKPCLRELDVSYSQIGDEGVLKLCEAVKNPNCNLKYL 426



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 170/382 (44%), Gaps = 11/382 (2%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSILRVL 279
           KT+ L    IG    + L  +L  N  +  L LS+ +L D G  A+ + LL  N  L+ L
Sbjct: 26  KTIRLDDCGIGISHCEDLSVLLTTNQELIELNLSNNELGDAGVDALCKGLLNPNCKLQKL 85

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHLH 338
            L N  +  +    L  +++  S++  LHL  N  G  G   L +GL + +  L  L L 
Sbjct: 86  WLRNCNLTTACCEKL-RSVVSKSSLTELHLGDNRLGTSGGRTLCQGLVDSSCQLESLQLQ 144

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYMN 397
              +  E I AL S L   K  L +L++ NN +  +   H+ +  +K   +L  + L   
Sbjct: 145 FCDLTKENIDALCSVLCV-KSSLQMLNLSNNKLGDEAVKHLCQALVKGSSNLQSLQLESC 203

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR-VLKDNSVITSLDLAYNPIG 456
           +I     + ++  L    ++  + +G NNI   G + + + V   NS +  L L    I 
Sbjct: 204 EITRASCDDLSTFLSSTPSLKELCIGDNNIGDAGLAILCQGVQNPNSKLEKLWLWECNIS 263

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDEG 515
           A G + L++++     +  + L    +   G E +   L+   T +  L LR  GL    
Sbjct: 264 AAGCEELAQIIGTKETLKEMSLLGNPVTNEGVELLCQGLKNPKTKLQSLWLRDCGLTAAC 323

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
            K ++ +   VN  L  + L  N I D+G   I + + ++ +  + SL L  + LT    
Sbjct: 324 CKSISSALS-VNSVLKELQLGGNSIGDEGVIEICEGV-SSPNCNLESLWLGQSSLTAVCC 381

Query: 576 SALTDAKDLVYEMSEKEVNIFF 597
            AL  AK +V +   +E+++ +
Sbjct: 382 DAL--AKLIVEKPCLRELDVSY 401


>gi|300697280|ref|YP_003747941.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
            solanacearum CFBP2957]
 gi|299074004|emb|CBJ53541.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
            solanacearum CFBP2957]
          Length = 1051

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 197/427 (46%), Gaps = 85/427 (19%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            LSG TG    E+   L + A+  R  +S+D+S    GD  +  LA S         ++ +
Sbjct: 654  LSGCTGAAVSEAG--LADLAR--RPLASLDLSRTRIGDREVQALASSASLTS----LNLS 705

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N I  AG +A    L  N  L +LN+S NPIGD GV+ L      +  +  L+L  + +
Sbjct: 706  GNRIGDAGAQA----LGRNTVLTSLNVSANPIGDTGVQALAG----SRSLTSLELRGIRI 757

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
             + G  A+A    +N++LR L++++N +       LA     N T+ SL  N + G    
Sbjct: 758  GEAGIAALA----SNTVLRSLDISSNDLSEQSAAELAR----NQTLTSLKAN-DCGLT-- 806

Query: 319  ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             N +A+ L   +SLR L +  NSIGD G+ A+     +R   L  L++ +N I+ +G   
Sbjct: 807  -NGMAQQLARIRSLRTLEVGSNSIGDTGVLAI-----ARNASLRTLNLSHNPITLQGLRP 860

Query: 379  V--------------------AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            +                    A  +   ++L  + L  N IG  GA+     L  NRT+ 
Sbjct: 861  LELSRTLTSLDVSRIGCGDRGALLLSKNRALTSLKLGFNGIGSAGAQ----GLTANRTLI 916

Query: 419  TIDLGGNNIHSKGASAIARV--------------------LKDNSVITSLDLAYNPIGAD 458
            ++DL GN I    A+A+A                      L ++  +T+LD++ N + + 
Sbjct: 917  SLDLRGNTIDVAAATALAHTGRLGSLNVSDCKLDDEAASALAESLTLTALDVSMNRLSSQ 976

Query: 459  GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
             A+AL+     +  + +L +    IG  GA+ +A+    + +++ LD RAN + + GA+ 
Sbjct: 977  AARALA----GNATLTSLNISHNHIGPDGAQALAE----STSLTFLDARANDIGEAGARA 1028

Query: 519  LAQSFKV 525
            L  + ++
Sbjct: 1029 LENNTRM 1035



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 186/383 (48%), Gaps = 62/383 (16%)

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLC--DIL---------VDNAGVERL----QLSSVD 257
             L S+ +L +LNLSGN IGD G + L    +L         + + GV+ L     L+S++
Sbjct: 692  ALASSASLTSLNLSGNRIGDAGAQALGRNTVLTSLNVSANPIGDTGVQALAGSRSLTSLE 751

Query: 258  LRD--EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            LR    G   IA  L +N++LR L++++N +       LA     N T+ SL  N + G 
Sbjct: 752  LRGIRIGEAGIAA-LASNTVLRSLDISSNDLSEQSAAELA----RNQTLTSLKAN-DCG- 804

Query: 316  ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
                N +A+ L   +SLR L +  NSIGD G+ A+     +R   L  L++ +N I+ +G
Sbjct: 805  --LTNGMAQQLARIRSLRTLEVGSNSIGDTGVLAI-----ARNASLRTLNLSHNPITLQG 857

Query: 376  AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
                   ++  ++L  +++     GD GA      L +NR +T++ LG N I S GA   
Sbjct: 858  ----LRPLELSRTLTSLDVSRIGCGDRGALL----LSKNRALTSLKLGFNGIGSAGAQG- 908

Query: 436  ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
               L  N  + SLDL  N I    A AL+      G + +L +  C++    A  +A+ L
Sbjct: 909  ---LTANRTLISLDLRGNTIDVAAATALAHT----GRLGSLNVSDCKLDDEAASALAESL 961

Query: 496  RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
                T++ LD+  N L  + A+ LA      N  LTS++++ N I  DGA A+A      
Sbjct: 962  ----TLTALDVSMNRLSSQAARALAG-----NATLTSLNISHNHIGPDGAQALA------ 1006

Query: 556  EDVAVTSLNLANNFLTKFGQSAL 578
            E  ++T L+   N + + G  AL
Sbjct: 1007 ESTSLTFLDARANDIGEAGARAL 1029



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 166/400 (41%), Gaps = 117/400 (29%)

Query: 276  LRVLELNNNMIDYSGFT--SLAEALLENSTIR---SLHLNGNYGGALGANALAKGLEGNK 330
            LR L  +   +D SG T  +++EA L +   R   SL L+    G     ALA     + 
Sbjct: 642  LRALPPSVRHLDLSGCTGAAVSEAGLADLARRPLASLDLSRTRIGDREVQALAS----SA 697

Query: 331  SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA---------- 380
            SL  L+L GN IGD G +AL      R   L  L++  N I   G   +A          
Sbjct: 698  SLTSLNLSGNRIGDAGAQAL-----GRNTVLTSLNVSANPIGDTGVQALAGSRSLTSLEL 752

Query: 381  ----------EYIKNCKSLLWINLYMNDIGDEGAEKIA-----DALKQN----------- 414
                        + +   L  +++  ND+ ++ A ++A      +LK N           
Sbjct: 753  RGIRIGEAGIAALASNTVLRSLDISSNDLSEQSAAELARNQTLTSLKANDCGLTNGMAQQ 812

Query: 415  ----RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL------- 463
                R++ T+++G N+I   G  AIAR    N+ + +L+L++NPI   G + L       
Sbjct: 813  LARIRSLRTLEVGSNSIGDTGVLAIAR----NASLRTLNLSHNPITLQGLRPLELSRTLT 868

Query: 464  -------------SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
                         + +L  +  + +LKLG+  IG++GA+     L  N T+  LDLR N 
Sbjct: 869  SLDVSRIGCGDRGALLLSKNRALTSLKLGFNGIGSAGAQG----LTANRTLISLDLRGNT 924

Query: 511  ------------------------LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
                                    L DE A  LA+S       LT++D++ N +    A 
Sbjct: 925  IDVAAATALAHTGRLGSLNVSDCKLDDEAASALAESLT-----LTALDVSMNRLSSQAAR 979

Query: 547  AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 586
            A+A       +  +TSLN+++N +   G  AL ++  L +
Sbjct: 980  ALAG------NATLTSLNISHNHIGPDGAQALAESTSLTF 1013



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 42/278 (15%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           +E L ++  D+ D GA+    LL  N  LR L    N  +     + A AL E+  + SL
Sbjct: 155 LESLNVAGADIGDGGAR----LLAANPSLRAL----NAANGGIGAAGARALAESPVLTSL 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N  G  GA ALA    G++SL  L +    + D G RAL    +     L  LD+G
Sbjct: 207 DLSQNGIGDEGARALA----GSRSLTNLAVLNCLVTDVGARALAGNRT-----LTALDLG 257

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           N           A Y +            N+I  +GA     AL QNR++T++ + GN  
Sbjct: 258 NLITETGNELEQAAYDRTA----------NEITAQGAW----ALAQNRSLTSLSIQGNLC 303

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
              G  A+A     +S +TSL++AY  +  + AK L+     +  + +L + W   G   
Sbjct: 304 GDAGVQALA----GSSTLTSLNVAYTDMTLESAKELAR----NPVLTSLSVRW-NYGLGD 354

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
           A  V   L  + ++++LD R+ G+ +  A  L+ + ++
Sbjct: 355 AGVVE--LAKSPSLTLLDARSTGMSERTALVLSANARI 390



 Score = 42.7 bits (99), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 119/258 (46%), Gaps = 38/258 (14%)

Query: 330 KSLRELHLHGN--SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
           ++L ELH + N  S+  +G    ++ L +    L  LD+   + SAK +  +A Y+    
Sbjct: 97  RTLSELHHYPNLTSLQLKG-NLTLADLKALPATLRHLDLSACTGSAKSSEAIA-YLAGLP 154

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            L  +N+   DIGD GA  +A     N ++  +    N  +    +A AR L ++ V+TS
Sbjct: 155 -LESLNVAGADIGDGGARLLA----ANPSLRAL----NAANGGIGAAGARALAESPVLTS 205

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           LDL+ N IG +GA+AL+       N+  L    C +   GA  +A     N T++ LDL 
Sbjct: 206 LDLSQNGIGDEGARALAGSRSLT-NLAVLN---CLVTDVGARALAG----NRTLTALDL- 256

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
              L  E    L Q+         + D   NEI   GA+A+AQ      + ++TSL++  
Sbjct: 257 -GNLITETGNELEQA---------AYDRTANEITAQGAWALAQ------NRSLTSLSIQG 300

Query: 568 NFLTKFGQSALTDAKDLV 585
           N     G  AL  +  L 
Sbjct: 301 NLCGDAGVQALAGSSTLT 318



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 30/187 (16%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S++++G + GD G   LA        A     A N        A    L  +  L +L
Sbjct: 155 LESLNVAGADIGDGGARLLA--------ANPSLRALNAANGGIGAAGARALAESPVLTSL 206

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N IGDEG + L      +  +  L + +  + D GA+A+A     N  L  L+L N
Sbjct: 207 DLSQNGIGDEGARALAG----SRSLTNLAVLNCLVTDVGARALA----GNRTLTALDLGN 258

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +I  +G   L +A  + +         N   A GA ALA+    N+SL  L + GN  G
Sbjct: 259 -LITETG-NELEQAAYDRT--------ANEITAQGAWALAQ----NRSLTSLSIQGNLCG 304

Query: 344 DEGIRAL 350
           D G++AL
Sbjct: 305 DAGVQAL 311


>gi|125815593|ref|XP_001344236.1| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Danio rerio]
          Length = 440

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           NI    +N+    +G +G K L   LV N  + +L L    +   GA AIA++LK N  +
Sbjct: 140 NINQSEVNMMHCGLGAQGTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYI 199

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             ++L++N +   G  +L+  LLENST+ S++L+GN+     A  L+  L  N+ L+ L 
Sbjct: 200 TEIDLSDNRMGEYGARALSSMLLENSTLFSVNLSGNHLDERAAKHLSPALISNQKLQHLD 259

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N + D     L + ++   G L  L++  N I  KGA   A+ ++    L  ++L  
Sbjct: 260 LSHNRLTDTAGEILGAAIAENTG-LKALNLAWNCIRGKGAIAFAKGLEGNIFLRSVDLSY 318

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N +G +GA  + +ALKQN T+  +++  N I  +GA  +A  LK N+ +  L ++ NPI 
Sbjct: 319 NGLGKDGALALEEALKQNNTLEDLNISNNRIPFEGAVHLALGLKVNTTLRILKMSRNPIQ 378

Query: 457 ADGAKAL 463
           + G  A+
Sbjct: 379 SAGCFAI 385



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 2/257 (0%)

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  +LA +L+ N++I  L+L  N+    GA A+A  L+ N  + E+ L  N +G+ G RA
Sbjct: 157 GTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYITEIDLSDNRMGEYGARA 216

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L S L       +V ++  N +  + A H++  + + + L  ++L  N + D   E +  
Sbjct: 217 LSSMLLENSTLFSV-NLSGNHLDERAAKHLSPALISNQKLQHLDLSHNRLTDTAGEILGA 275

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           A+ +N  +  ++L  N I  KGA A A+ L+ N  + S+DL+YN +G DGA AL E LK 
Sbjct: 276 AIAENTGLKALNLAWNCIRGKGAIAFAKGLEGNIFLRSVDLSYNGLGKDGALALEEALKQ 335

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +  +  L +   +I   GA  +A  L+ N T+ IL +  N ++  G   + +S +   E+
Sbjct: 336 NNTLEDLNISNNRIPFEGAVHLALGLKVNTTLRILKMSRNPIQSAGCFAILKSVQSNPES 395

Query: 530 LTSIDLAFNEIRDDGAF 546
                L F++I  D  F
Sbjct: 396 AAEF-LDFSDICVDQEF 411



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 129/250 (51%), Gaps = 1/250 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+M     G +G   LA SL  N +  +++   N +  AG  A   +L+ N  +  ++
Sbjct: 144 SEVNMMHCGLGAQGTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYITEID 203

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N +G+ G + L  +L++N+ +  + LS   L +  AK ++  L +N  L+ L+L++N
Sbjct: 204 LSDNRMGEYGARALSSMLLENSTLFSVNLSGNHLDERAAKHLSPALISNQKLQHLDLSHN 263

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +  +    L  A+ EN+ +++L+L  N     GA A AKGLEGN  LR + L  N +G 
Sbjct: 264 RLTDTAGEILGAAIAENTGLKALNLAWNCIRGKGAIAFAKGLEGNIFLRSVDLSYNGLGK 323

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           +G  AL   L  +   L  L+I NN I  +GA H+A  +K   +L  + +  N I   G 
Sbjct: 324 DGALALEEAL-KQNNTLEDLNISNNRIPFEGAVHLALGLKVNTTLRILKMSRNPIQSAGC 382

Query: 405 EKIADALKQN 414
             I  +++ N
Sbjct: 383 FAILKSVQSN 392



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 123/265 (46%), Gaps = 1/265 (0%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           EV+    G+ A G KA    L +N ++  LNL  N +   G   + D+L +N  +  + L
Sbjct: 145 EVNMMHCGLGAQGTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYITEIDL 204

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           S   + + GA+A++ +L  NS L  + L+ N +D      L+ AL+ N  ++ L L+ N 
Sbjct: 205 SDNRMGEYGARALSSMLLENSTLFSVNLSGNHLDERAAKHLSPALISNQKLQHLDLSHNR 264

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
                   L   +  N  L+ L+L  N I  +G  A   GL      L  +D+  N +  
Sbjct: 265 LTDTAGEILGAAIAENTGLKALNLAWNCIRGKGAIAFAKGLEGNIF-LRSVDLSYNGLGK 323

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            GA  + E +K   +L  +N+  N I  EGA  +A  LK N T+  + +  N I S G  
Sbjct: 324 DGALALEEALKQNNTLEDLNISNNRIPFEGAVHLALGLKVNTTLRILKMSRNPIQSAGCF 383

Query: 434 AIARVLKDNSVITSLDLAYNPIGAD 458
           AI + ++ N    +  L ++ I  D
Sbjct: 384 AILKSVQSNPESAAEFLDFSDICVD 408



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 3/198 (1%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           + A+G   +A  +    S+L +NL  N +   GA  IAD LK+N  IT IDL  N +   
Sbjct: 153 LGAQGTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYITEIDLSDNRMGEY 212

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA A++ +L +NS + S++L+ N +    AK LS  L  +  +  L L   ++  +  E 
Sbjct: 213 GARALSSMLLENSTLFSVNLSGNHLDERAAKHLSPALISNQKLQHLDLSHNRLTDTAGEI 272

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           +   +  N  +  L+L  N +R +GA   A+  +  N  L S+DL++N +  DGA A+ +
Sbjct: 273 LGAAIAENTGLKALNLAWNCIRGKGAIAFAKGLE-GNIFLRSVDLSYNGLGKDGALALEE 331

Query: 551 ALKANEDVAVTSLNLANN 568
           ALK N    +  LN++NN
Sbjct: 332 ALKQNN--TLEDLNISNN 347



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 104/190 (54%), Gaps = 3/190 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +N+    +G +G + +A +L  N +I  ++L  N +   GA+AIA +LK+N  IT +DL+
Sbjct: 146 VNMMHCGLGAQGTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYITEIDLS 205

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +G  GA+ALS +L  +  + ++ L    +    A+ ++  L  N  +  LDL  N L
Sbjct: 206 DNRMGEYGARALSSMLLENSTLFSVNLSGNHLDERAAKHLSPALISNQKLQHLDLSHNRL 265

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            D   + L  +    N  L +++LA+N IR  GA A A+ L+ N  + + S++L+ N L 
Sbjct: 266 TDTAGEILGAAI-AENTGLKALNLAWNCIRGKGAIAFAKGLEGN--IFLRSVDLSYNGLG 322

Query: 572 KFGQSALTDA 581
           K G  AL +A
Sbjct: 323 KDGALALEEA 332



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 2/222 (0%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E+++    +G +G +AL   L +    L  L++ +N +   GA  +A+ +K    +  I+
Sbjct: 145 EVNMMHCGLGAQGTKALAISLVTNTSILK-LNLRDNWMEGAGAAAIADMLKENCYITEID 203

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N +G+ GA  ++  L +N T+ +++L GN++  + A  ++  L  N  +  LDL++N
Sbjct: 204 LSDNRMGEYGARALSSMLLENSTLFSVNLSGNHLDERAAKHLSPALISNQKLQHLDLSHN 263

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +     + L   +  +  +  L L W  I   GA   A  L  N  +  +DL  NGL  
Sbjct: 264 RLTDTAGEILGAAIAENTGLKALNLAWNCIRGKGAIAFAKGLEGNIFLRSVDLSYNGLGK 323

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           +GA  L ++ K  N  L  ++++ N I  +GA  +A  LK N
Sbjct: 324 DGALALEEALKQ-NNTLEDLNISNNRIPFEGAVHLALGLKVN 364



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 15/228 (6%)

Query: 129 NWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGY 188
           NW  GAG   ++               +  KE    + +D+S    G+ G   L+  L  
Sbjct: 179 NWMEGAGAAAIA---------------DMLKENCYITEIDLSDNRMGEYGARALSSMLLE 223

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N T   V+ + N +     K     L SN  L+ L+LS N + D   + L   + +N G+
Sbjct: 224 NSTLFSVNLSGNHLDERAAKHLSPALISNQKLQHLDLSHNRLTDTAGEILGAAIAENTGL 283

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + L L+   +R +GA A A+ L+ N  LR ++L+ N +   G  +L EAL +N+T+  L+
Sbjct: 284 KALNLAWNCIRGKGAIAFAKGLEGNIFLRSVDLSYNGLGKDGALALEEALKQNNTLEDLN 343

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           ++ N     GA  LA GL+ N +LR L +  N I   G  A++  + S
Sbjct: 344 ISNNRIPFEGAVHLALGLKVNTTLRILKMSRNPIQSAGCFAILKSVQS 391



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 72/126 (57%), Gaps = 3/126 (2%)

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           + +++ +  +GA G KAL+  L  + +I  L L    +  +GA  +ADML+ N  I+ +D
Sbjct: 144 SEVNMMHCGLGAQGTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYITEID 203

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           L  N + + GA+ L+ S  + N  L S++L+ N + +  A  ++ AL +N+   +  L+L
Sbjct: 204 LSDNRMGEYGARALS-SMLLENSTLFSVNLSGNHLDERAAKHLSPALISNQ--KLQHLDL 260

Query: 566 ANNFLT 571
           ++N LT
Sbjct: 261 SHNRLT 266


>gi|111306461|gb|AAI21161.1| Chromosome 14 open reading frame 166B [Homo sapiens]
 gi|111307747|gb|AAI21160.1| Chromosome 14 open reading frame 166B [Homo sapiens]
          Length = 462

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 78  NMEESYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYL 137

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    N S+I SL L+GN      A  L + L  N  +++L
Sbjct: 138 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYQIKKL 197

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 198 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 256

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ NR +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 257 MNGFGNEVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 316

Query: 456 GADGA 460
             DGA
Sbjct: 317 NMDGA 321



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 133/267 (49%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 84  VNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 142

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  ++ A  +  AL  N  I  +DL  N
Sbjct: 143 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYQIKKLDLSHN 202

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 203 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 262

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
             A  + ++LR N  +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 263 EVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISKGLES-NESLRVLKLFLNPINMDGA 321

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  A+K N    +  L+++N  +++
Sbjct: 322 ILLILAIKRNPKSRMEELDISNVLVSE 348



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 30/264 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 95  GTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 154

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 155 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-QIKKLDLSHNQFS-------- 205

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 206 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 245

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 246 GNVTLTKLDLSMNGFGNEVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISKGLESNES 305

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           + +L L  N +  +GA  L  + K
Sbjct: 306 LRVLKLFLNPINMDGAILLILAIK 329



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 129/252 (51%), Gaps = 7/252 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +  +   + +E  +S   L+ HG  +G  G +A+   L S    +  L++ +N I  +
Sbjct: 68  GVVPVSYFIRNME--ESYVNLNHHG--LGPRGTKAIAIALVSNMA-VTKLELEDNCIMEE 122

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
           G   + E ++    L  +N+  N +G EGA  I+D  ++N + I +++L GN+     A+
Sbjct: 123 GVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAA 182

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            + + L  N  I  LDL++N     G + L ++L  +  + +L L W      GA  + +
Sbjct: 183 LLCQALSTNYQIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCN 242

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            LR N T++ LDL  NG  +E A  L +  + +N  L  +D+  N+I ++GA  I++ L+
Sbjct: 243 GLRGNVTLTKLDLSMNGFGNEVALALGEVLR-LNRCLVYLDIGGNDIGNEGASKISKGLE 301

Query: 554 ANEDVAVTSLNL 565
           +NE + V  L L
Sbjct: 302 SNESLRVLKLFL 313



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 82  SYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 141

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 142 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYQIKKLDLSH 201

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 202 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 261

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L   +  L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 262 NEVALALGEVLRLNRC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 320

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 321 AILLILAIKRN 331



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 119 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 178

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 179 DSAALLCQALSTNYQIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 238

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  N  +  L + GN  G  GA+ ++K
Sbjct: 239 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNRCLVYLDIGGNDIGNEGASKISK 298

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 299 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 349


>gi|17549135|ref|NP_522475.1| GALA protein 1 [Ralstonia solanacearum GMI1000]
 gi|17431386|emb|CAD18065.1| lrr-gala family type III effector protein (gala 1) [Ralstonia
           solanacearum GMI1000]
          Length = 661

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 208/454 (45%), Gaps = 90/454 (19%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+ G   GD G    A++L  N +   +  + N I  AG +A    L +N  L +L
Sbjct: 190 LTALDIRGNGIGDAG----AQALAANTSITSLDASFNDIGVAGARA----LAANTTLTSL 241

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N IGDEG++ L      N  +  L + S ++ D GA A+A      S+    +L  
Sbjct: 242 DLGFNAIGDEGLQALA----TNTSLTSLTVGSCEIGDAGAAALANNTALTSV----DLTC 293

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G    AE L  N+ + SL L  N     GA ALA    GN +L  L ++ N I 
Sbjct: 294 NHIGEEG----AEGLAANTVLTSLDLTRNSISDRGAAALA----GNTTLTSLCVNFNDIY 345

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
             G R L     +    L  LDI  N I   GA  +A+ +    +L  +++    IG EG
Sbjct: 346 GRGARWL-----AENTTLTTLDISYNPIGDWGALGLADNM----TLRSLSVVAGRIGVEG 396

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIA--------------------RVLKDNS 443
           A     AL  N T+TT+D+  N I ++GA A+A                       K N+
Sbjct: 397 AR----ALAGNTTLTTLDISVNAIGNEGAQALAANATLTTLSLRSCELRAAAAEAFKANT 452

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            + SLD+  N I A GA+AL++    +  + TL++   QIG +GA+ +A     N +++ 
Sbjct: 453 TLASLDIGENRIEAAGAQALAD----NTALTTLRVTGNQIGMAGAQALA----ANRSLTK 504

Query: 504 LDLRANGLRDEGAKCLAQSFKVV-------------------NEALTSIDLAFNEIRDDG 544
           L++  N +R  GA+ LA +  +                    N ++T +++  N I D G
Sbjct: 505 LNISQNDIRSAGAQALAANTSLTSLDVSSASIGAAGAQALAANTSITWLNINDNHIGDAG 564

Query: 545 AFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
               AQAL A+   A+TSL   +NF+   G  AL
Sbjct: 565 ----AQALAAHP--ALTSLYACDNFIGTAGVQAL 592



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 165/352 (46%), Gaps = 74/352 (21%)

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           ++ L  L++  N I  +G    A+AL  N++I SL  + N  G  GA ALA     N +L
Sbjct: 187 STTLTALDIRGNGIGDAG----AQALAANTSITSLDASFNDIGVAGARALA----ANTTL 238

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
             L L  N+IGDEG++AL +  S     L  L +G+  I   GA  +A           +
Sbjct: 239 TSLDLGFNAIGDEGLQALATNTS-----LTSLTVGSCEIGDAGAAALANNTALTS----V 289

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA---------------- 436
           +L  N IG+EGAE +A     N  +T++DL  N+I  +GA+A+A                
Sbjct: 290 DLTCNHIGEEGAEGLA----ANTVLTSLDLTRNSISDRGAAALAGNTTLTSLCVNFNDIY 345

Query: 437 ----RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
               R L +N+ +T+LD++YNPIG  GA  L++ +       +L +   +IG  GA  +A
Sbjct: 346 GRGARWLAENTTLTTLDISYNPIGDWGALGLADNMTLR----SLSVVAGRIGVEGARALA 401

Query: 493 DMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV-------------------NEALTSI 533
                N T++ LD+  N + +EGA+ LA +  +                    N  L S+
Sbjct: 402 G----NTTLTTLDISVNAIGNEGAQALAANATLTTLSLRSCELRAAAAEAFKANTTLASL 457

Query: 534 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
           D+  N I   GA A+A      ++ A+T+L +  N +   G  AL   + L 
Sbjct: 458 DIGENRIEAAGAQALA------DNTALTTLRVTGNQIGMAGAQALAANRSLT 503



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 83/182 (45%), Gaps = 36/182 (19%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N T   +    N I AAG +A    L  N AL TL ++GN IG  G + L      N  +
Sbjct: 451 NTTLASLDIGENRIEAAGAQA----LADNTALTTLRVTGNQIGMAGAQALAA----NRSL 502

Query: 249 ERLQLSSVDLRDEGAKAIA--------------------ELLKNNSILRVLELNNNMIDY 288
            +L +S  D+R  GA+A+A                    + L  N+ +  L +N+N I  
Sbjct: 503 TKLNISQNDIRSAGAQALAANTSLTSLDVSSASIGAAGAQALAANTSITWLNINDNHIGD 562

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G    A+AL  +  + SL+   N+ G  G  ALA     N  L  L + GN IGD G++
Sbjct: 563 AG----AQALAAHPALTSLYACDNFIGTAGVQALA----ANTRLTSLSIWGNRIGDAGVK 614

Query: 349 AL 350
           AL
Sbjct: 615 AL 616


>gi|291394610|ref|XP_002713781.1| PREDICTED: nucleotide-binding oligomerization domain containing 1
           [Oryctolagus cuniculus]
          Length = 953

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S     L V+ +  N I+  G   + E +   K L ++ LY N I D GA+
Sbjct: 719 GVRELQPCFSC----LTVVRLSVNQITDSGVKVLCEELTKYKILTYLGLYNNQITDVGAK 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + R++T I LG N I S+G   +A  +K +S I  + +  N IG +GAKA +E
Sbjct: 775 YVAKILDECRSLTHIKLGKNKITSEGGKCLALAVKHSSSIVDIGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I + G   +A  L  N ++ I  L  N L D+ A+ +A   K 
Sbjct: 835 ALRNHTSLRNLSLAFNGITSEGGRSLAQALHCNTSLQIFWLTKNELNDDVAESMADMLK- 893

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           VN+ L  + L  N+I   G   +A+AL+ N  +    LN
Sbjct: 894 VNQTLKHLWLIQNQITARGTAQLAEALRQNTGILEICLN 932



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 102/207 (49%), Gaps = 1/207 (0%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L  + LS N I D GVK LC+ L     +  L L +  + D GAK +A++L     L  
Sbjct: 729 CLTVVRLSVNQITDSGVKVLCEELTKYKILTYLGLYNNQITDVGAKYVAKILDECRSLTH 788

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           ++L  N I   G   LA A+  +S+I  + + GN  G  GA A A+ L  + SLR L L 
Sbjct: 789 IKLGKNKITSEGGKCLALAVKHSSSIVDIGMWGNQIGDEGAKAFAEALRNHTSLRNLSLA 848

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N I  EG R+L   L      L +  +  N ++   A  +A+ +K  ++L  + L  N 
Sbjct: 849 FNGITSEGGRSLAQALHCNTS-LQIFWLTKNELNDDVAESMADMLKVNQTLKHLWLIQNQ 907

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGN 425
           I   G  ++A+AL+QN  I  I L GN
Sbjct: 908 ITARGTAQLAEALRQNTGILEICLNGN 934



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 31/245 (12%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L V+ L+ N I  SG   L E L +   +  L L  N    +GA  +AK 
Sbjct: 720 VRELQPCFSCLTVVRLSVNQITDSGVKVLCEELTKYKILTYLGLYNNQITDVGAKYVAKI 779

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+  +SL  + L                             G N I+++G   +A  +K+
Sbjct: 780 LDECRSLTHIKL-----------------------------GKNKITSEGGKCLALAVKH 810

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             S++ I ++ N IGDEGA+  A+AL+ + ++  + L  N I S+G  ++A+ L  N+ +
Sbjct: 811 SSSIVDIGMWGNQIGDEGAKAFAEALRNHTSLRNLSLAFNGITSEGGRSLAQALHCNTSL 870

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
               L  N +  D A++++++LK +  +  L L   QI A G   +A+ LR N    IL+
Sbjct: 871 QIFWLTKNELNDDVAESMADMLKVNQTLKHLWLIQNQITARGTAQLAEALRQNT--GILE 928

Query: 506 LRANG 510
           +  NG
Sbjct: 929 ICLNG 933



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 95/215 (44%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           + E        + V +S     D G+  L E L   +    +    N IT  G K    +
Sbjct: 720 VRELQPCFSCLTVVRLSVNQITDSGVKVLCEELTKYKILTYLGLYNNQITDVGAKYVAKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L    +L  + L  N I  EG KCL   +  ++ +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECRSLTHIKLGKNKITSEGGKCLALAVKHSSSIVDIGMWGNQIGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + LR L L  N I   G  SLA+AL  N++++   L  N      A ++A  L+ N++L+
Sbjct: 840 TSLRNLSLAFNGITSEGGRSLAQALHCNTSLQIFWLTKNELNDDVAESMADMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I   G   L   L    G L +   GN
Sbjct: 900 HLWLIQNQITARGTAQLAEALRQNTGILEICLNGN 934



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 91/189 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E   + +  + + +      D G  ++A+ L   ++   +    N IT+ G K   
Sbjct: 746 KVLCEELTKYKILTYLGLYNNQITDVGAKYVAKILDECRSLTHIKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++ + ++  + + GN IGDEG K   + L ++  +  L L+   +  EG +++A+ L 
Sbjct: 806 LAVKHSSSIVDIGMWGNQIGDEGAKAFAEALRNHTSLRNLSLAFNGITSEGGRSLAQALH 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L++  L  N ++     S+A+ L  N T++ L L  N   A G   LA+ L  N  
Sbjct: 866 CNTSLQIFWLTKNELNDDVAESMADMLKVNQTLKHLWLIQNQITARGTAQLAEALRQNTG 925

Query: 332 LRELHLHGN 340
           + E+ L+GN
Sbjct: 926 ILEICLNGN 934


>gi|83749484|ref|ZP_00946474.1| cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease
           inhibitor (RI)-like subfamily. [Ralstonia solanacearum
           UW551]
 gi|83723838|gb|EAP71026.1| cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease
           inhibitor (RI)-like subfamily. [Ralstonia solanacearum
           UW551]
 gi|332322076|gb|AEE41039.1| GALA4 type III effector [Ralstonia solanacearum]
          Length = 460

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 152/301 (50%), Gaps = 43/301 (14%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++++     GD G+   A     N+    ++ ++NGI   G++A    L +N  + TL
Sbjct: 193 LTTLNLRRNAIGDAGVAAFAR----NKKLTTLNVSSNGIGPVGVRA----LAANTTITTL 244

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++S N IGDEG +     L  N  + RL  S   +  EG +A+A     ++ L  L+L+ 
Sbjct: 245 DISNNEIGDEGARA----LASNTALTRLDASDCGIGPEGTQALA----TSTTLTSLDLSY 296

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I+  G     EAL  N+T+R+LH  GN  G   A  LA     N +L  L+L  N+IG
Sbjct: 297 NAIEAEGV----EALGRNTTLRTLHACGNELGHREAELLA----ANTTLTVLNLSSNAIG 348

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G RA  +  +     L  L++ NN I       V E+  N K L  ++L  N IGD  
Sbjct: 349 NAGARAFGANTT-----LVELNLSNNGIE-----RVPEWADNGK-LTTLDLSNNQIGDTA 397

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+ +A     + T+TT+++G N I   GA A+A     N+ +T+L+++ N IG  G  AL
Sbjct: 398 AQVLA----ASHTLTTLNVGSNRIGDTGACALA----GNTTLTTLNVSLNRIGKAGMLAL 449

Query: 464 S 464
           +
Sbjct: 450 A 450



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 48/273 (17%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L G+ +L  L+L  N+IGD G+ A      +R  KL  L++ +N I   G   +A  
Sbjct: 184 ARLLAGHPTLTTLNLRRNAIGDAGVAAF-----ARNKKLTTLNVSSNGIGPVGVRALAAN 238

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                ++  +++  N+IGDEGA     AL  N  +T +D     I  +G  A+A     +
Sbjct: 239 ----TTITTLDISNNEIGDEGAR----ALASNTALTRLDASDCGIGPEGTQALA----TS 286

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +TSLDL+YN I A+G +AL      +  + TL     ++G   AE +A     N T++
Sbjct: 287 TTLTSLDLSYNAIEAEGVEALGR----NTTLRTLHACGNELGHREAELLA----ANTTLT 338

Query: 503 ILDLRANGLRDEGAKCLAQSFKVV-----------------NEALTSIDLAFNEIRDDGA 545
           +L+L +N + + GA+    +  +V                 N  LT++DL+ N+I D   
Sbjct: 339 VLNLSSNAIGNAGARAFGANTTLVELNLSNNGIERVPEWADNGKLTTLDLSNNQIGDTA- 397

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
              AQ L A+    +T+LN+ +N +   G  AL
Sbjct: 398 ---AQVLAASH--TLTTLNVGSNRIGDTGACAL 425


>gi|320170412|gb|EFW47311.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 667

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 89/143 (62%), Gaps = 3/143 (2%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I   GA AIA  LK N+ +  LDL  N IG+ GA+A++E LK +  +  L L W 
Sbjct: 4   LSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSWN 63

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           +IG +GA+ +A+  + N T++ LDL  + + D GA+ +A++  V N+ LT I+L  N+I 
Sbjct: 64  EIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNV-NKTLTRINLFDNQIG 122

Query: 542 DDGAFAIAQALKANEDVAVTSLN 564
           D GA AIA+ALK N   ++T LN
Sbjct: 123 DLGAHAIAEALKVN--TSLTDLN 143



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 89/142 (62%), Gaps = 1/142 (0%)

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IGD GA+ IA+ALK N T+  +DL  N I S GA AIA  LK N+ +T LDL++
Sbjct: 3   SLSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSW 62

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N IG  GA+A++E  K +  +  L L   QI  +GA+ +A+ L  N T++ ++L  N + 
Sbjct: 63  NEIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIG 122

Query: 513 DEGAKCLAQSFKVVNEALTSID 534
           D GA  +A++ K VN +LT ++
Sbjct: 123 DLGAHAIAEALK-VNTSLTDLN 143



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 82/140 (58%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I   GA  +AE +K   +L+ ++L+ N IG  GA+ IA+ALK N T+T +DL  N
Sbjct: 4   LSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSWN 63

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   GA AIA   K N+ +T LDL ++ I   GA+A++E L  +  +  + L   QIG 
Sbjct: 64  EIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIGD 123

Query: 486 SGAEFVADMLRYNNTISILD 505
            GA  +A+ L+ N +++ L+
Sbjct: 124 LGAHAIAEALKVNTSLTDLN 143



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 1/141 (0%)

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N  G +GA A+A+ L+ N +L EL LH N IG  G +A+   L      L  LD+  
Sbjct: 4   LSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNT-TLTKLDLSW 62

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA  +AE  K   ++  ++L+ + I D GA+ IA+AL  N+T+T I+L  N I 
Sbjct: 63  NEIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIG 122

Query: 429 SKGASAIARVLKDNSVITSLD 449
             GA AIA  LK N+ +T L+
Sbjct: 123 DLGAHAIAEALKVNTSLTDLN 143



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N IGD G +A+   L      L  LD+  N I + GA  +AE +K   +L  ++L  
Sbjct: 4   LSENQIGDVGAQAIAEALKVNT-TLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSW 62

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N+IG+ GA+ IA+A K N T+T +DL  + I   GA AIA  L  N  +T ++L  N IG
Sbjct: 63  NEIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIG 122

Query: 457 ADGAKALSEVLKFHGNINTL 476
             GA A++E LK + ++  L
Sbjct: 123 DLGAHAIAEALKVNTSLTDL 142



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 80/140 (57%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S + N I   G +A    L+ N  L  L+L  N IG  G + + + L  N  + +L LS 
Sbjct: 3   SLSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSW 62

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            ++ + GA+AIAE  K N+ +  L+L+++ I  +G  ++AEAL  N T+  ++L  N  G
Sbjct: 63  NEIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIG 122

Query: 316 ALGANALAKGLEGNKSLREL 335
            LGA+A+A+ L+ N SL +L
Sbjct: 123 DLGAHAIAEALKVNTSLTDL 142



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 5/158 (3%)

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N IGD G + + + L  N  +  L L    +   GA+AIAE LK N+ L  L+L+ 
Sbjct: 3   SLSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSW 62

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  ++AEA   N+T+  L L+ +     GA A+A+ L  NK+L  ++L  N IG
Sbjct: 63  NEIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIG 122

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           D G  A+   L   K   ++ D+  NS S+  A  V E
Sbjct: 123 DLGAHAIAEAL---KVNTSLTDL--NSTSSAAAPSVPE 155



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 71/139 (51%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GD G   +AE+L  N T  E+    N I +AG +A    L+ N  L  L+LS N
Sbjct: 4   LSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSWN 63

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG+ G + + +    N  V +L L    + D GA+AIAE L  N  L  + L +N I  
Sbjct: 64  EIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIGD 123

Query: 289 SGFTSLAEALLENSTIRSL 307
            G  ++AEAL  N+++  L
Sbjct: 124 LGAHAIAEALKVNTSLTDL 142



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 3/104 (2%)

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           L   QIG  GA+ +A+ L+ N T+  LDL  N +   GA+ +A++ KV N  LT +DL++
Sbjct: 4   LSENQIGDVGAQAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKV-NTTLTKLDLSW 62

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           NEI + GA AIA+A K N    VT L+L ++ ++  G  A+ +A
Sbjct: 63  NEIGEAGAQAIAEAFKVN--TTVTKLDLHHSQISDAGAQAIAEA 104



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 57/125 (45%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K       +D+     G  G   +AE+L  N T  ++  + N I  AG +A  
Sbjct: 15  QAIAEALKVNTTLVELDLHQNQIGSAGAQAIAEALKVNTTLTKLDLSWNEIGEAGAQAIA 74

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              + N  +  L+L  + I D G + + + L  N  + R+ L    + D GA AIAE LK
Sbjct: 75  EAFKVNTTVTKLDLHHSQISDAGAQAIAEALNVNKTLTRINLFDNQIGDLGAHAIAEALK 134

Query: 272 NNSIL 276
            N+ L
Sbjct: 135 VNTSL 139



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 46/104 (44%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     + +D+S    G+ G   +AE+   N T  ++    + I+ AG +A  
Sbjct: 43  QAIAEALKVNTTLTKLDLSWNEIGEAGAQAIAEAFKVNTTVTKLDLHHSQISDAGAQAIA 102

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
             L  N  L  +NL  N IGD G   + + L  N  +  L  +S
Sbjct: 103 EALNVNKTLTRINLFDNQIGDLGAHAIAEALKVNTSLTDLNSTS 146


>gi|300704108|ref|YP_003745710.1| leucine-rich-repeat type III effector protein (gala4) [Ralstonia
           solanacearum CFBP2957]
 gi|299071771|emb|CBJ43095.1| leucine-rich-repeat type III effector protein (GALA4) [Ralstonia
           solanacearum CFBP2957]
          Length = 461

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 143/276 (51%), Gaps = 39/276 (14%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N+    ++ ++NGI  AG++A    L +N  + TL++S N IGDEG   L      N  +
Sbjct: 215 NKKLTTLNVSSNGIGPAGVRA----LAANTTITTLDISNNEIGDEGALAL----ASNTTL 266

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
            RL  S   +  EG +A+A     ++ L  L+L+ N I+  G     EAL  N+T+R+LH
Sbjct: 267 TRLDASDCGIGPEGTQALA----TSTTLTSLDLSYNAIEAEGV----EALGRNTTLRTLH 318

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
             GN  G   A  LA     N +L  L+L  N+IG+ G RA  +  +     L  L++ N
Sbjct: 319 ACGNELGHREAELLA----ANTTLTVLNLSSNAIGNAGARAFGANTT-----LVELNLSN 369

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I       V E+  N K L  ++L  N IGD  A+ +A     +RT+TT+++G N I 
Sbjct: 370 NGIE-----RVPEWADNGK-LTTLDLSNNQIGDTAAQVLA----ASRTLTTLNVGSNRIG 419

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             GA A+A     N+ +T+L+++ N IG  G  AL+
Sbjct: 420 DTGACALA----GNTTLTTLNVSLNRIGKAGMLALA 451



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 48/273 (17%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L G+ +L  L+L  N+I D G+ A      +R  KL  L++ +N I   G   +A  
Sbjct: 185 ARLLAGHPTLTTLNLRRNAIDDAGVAAF-----ARNKKLTTLNVSSNGIGPAGVRALAAN 239

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                ++  +++  N+IGDEGA     AL  N T+T +D     I  +G  A+A     +
Sbjct: 240 T----TITTLDISNNEIGDEGAL----ALASNTTLTRLDASDCGIGPEGTQALA----TS 287

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +TSLDL+YN I A+G +AL      +  + TL     ++G   AE +A     N T++
Sbjct: 288 TTLTSLDLSYNAIEAEGVEALGR----NTTLRTLHACGNELGHREAELLA----ANTTLT 339

Query: 503 ILDLRANGLRDEGAKCLAQSFKVV-----------------NEALTSIDLAFNEIRDDGA 545
           +L+L +N + + GA+    +  +V                 N  LT++DL+ N+I D   
Sbjct: 340 VLNLSSNAIGNAGARAFGANTTLVELNLSNNGIERVPEWADNGKLTTLDLSNNQIGDTA- 398

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
              AQ L A+    +T+LN+ +N +   G  AL
Sbjct: 399 ---AQVLAASR--TLTTLNVGSNRIGDTGACAL 426



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 110/240 (45%), Gaps = 35/240 (14%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++D+S    GDEG   LA     N T   +  +  GI   G +A    L ++  L +L
Sbjct: 242 ITTLDISNNEIGDEGALALAS----NTTLTRLDASDCGIGPEGTQA----LATSTTLTSL 293

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N I  EGV+ L      N  +  L     +L   G +  AELL  N+ L VL L++
Sbjct: 294 DLSYNAIEAEGVEALG----RNTTLRTLHACGNEL---GHRE-AELLAANTTLTVLNLSS 345

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G    A A   N+T+  L+L+ N     G   + +  + N  L  L L  N IG
Sbjct: 346 NAIGNAG----ARAFGANTTLVELNLSNN-----GIERVPEWAD-NGKLTTLDLSNNQIG 395

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D   + L    +SR   L  L++G+N I   GA  +A       +L  +N+ +N IG  G
Sbjct: 396 DTAAQVLA---ASR--TLTTLNVGSNRIGDTGACALAGNT----TLTTLNVSLNRIGKAG 446



 Score = 39.7 bits (91), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 46/176 (26%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           AE L  N T   ++ ++N I  AG +AF     +N  L  LNLS N              
Sbjct: 329 AELLAANTTLTVLNLSSNAIGNAGARAFG----ANTTLVELNLSNN-------------- 370

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
               G+ER+         E A        +N  L  L+L+NN I   G T+ A+ L  + 
Sbjct: 371 ----GIERVP--------EWA--------DNGKLTTLDLSNNQI---GDTA-AQVLAASR 406

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           T+ +L++  N  G  GA ALA    GN +L  L++  N IG  G+ AL +  +  K
Sbjct: 407 TLTTLNVGSNRIGDTGACALA----GNTTLTTLNVSLNRIGKAGMLALAANTTLEK 458


>gi|343477062|emb|CCD12017.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 448

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 184/359 (51%), Gaps = 7/359 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           +KT++LS N +G    + +   L  +A V+ + L   D+  EG  A+++ +  +  LR+L
Sbjct: 68  VKTVHLSDNELGPTSSEKIISALSASA-VQEVLLCFNDIGREGCDALSDAVNISVNLRLL 126

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++  N ++      L +A+  + T+  L L  N  G  GA  + + LE N  L  L L  
Sbjct: 127 DIRGNGLNAKCVNKLLKAVSSSMTLVRLGLASNKLGEEGAMLVFRALEKNTFLTSLDLSL 186

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IG  G +++   L      L  + +  N +   G   +A  ++  +SL  + L  N+ 
Sbjct: 187 NEIGPGGAKSIAKLLEIPDSALKCVQLYGNYLGPSGVAVIALAVRRNRSLKQLTLGNNNA 246

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNPIGAD 458
            DE A ++A+ L +N T+  +DL  N I + G   +A+  L  N  + SL LA NPIG+ 
Sbjct: 247 TDEAAVQLAEMLSENSTLERLDLRLNVITAVGIRTLAQEGLGQNGSLLSLSLAGNPIGSV 306

Query: 459 GAKALSE--VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
           G + +S+  +L     ++ L L  CQ+G +G   VA+++  ++TI+ ++L  N L DE +
Sbjct: 307 GGEEISQSLILSQVTALSVLDLSSCQLGPTGGMRVANLIATSSTITDVNLSDNKLDDEAS 366

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
             +A S  +   +++ ++L+ NEI +  A  + +A++ N    + SLNL  N + +  Q
Sbjct: 367 VSIANSI-INGLSISMLNLSRNEIGEWSACNLIEAIQRN--YRMVSLNLHGNKINRTVQ 422



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 144/311 (46%), Gaps = 3/311 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+ G     + +  L +++  + T   +  A+N +   G       L+ N  L +L+LS
Sbjct: 126 LDIRGNGLNAKCVNKLLKAVSSSMTLVRLGLASNKLGEEGAMLVFRALEKNTFLTSLDLS 185

Query: 227 GNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N IG  G K +  +L + ++ ++ +QL    L   G   IA  ++ N  L+ L L NN 
Sbjct: 186 LNEIGPGGAKSIAKLLEIPDSALKCVQLYGNYLGPSGVAVIALAVRRNRSLKQLTLGNNN 245

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK-GLEGNKSLRELHLHGNSIGD 344
                   LAE L ENST+  L L  N   A+G   LA+ GL  N SL  L L GN IG 
Sbjct: 246 ATDEAAVQLAEMLSENSTLERLDLRLNVITAVGIRTLAQEGLGQNGSLLSLSLAGNPIGS 305

Query: 345 EGIRALMSGLS-SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            G   +   L  S+   L+VLD+ +  +   G   VA  I    ++  +NL  N + DE 
Sbjct: 306 VGGEEISQSLILSQVTALSVLDLSSCQLGPTGGMRVANLIATSSTITDVNLSDNKLDDEA 365

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           +  IA+++    +I+ ++L  N I    A  +   ++ N  + SL+L  N I     K +
Sbjct: 366 SVSIANSIINGLSISMLNLSRNEIGEWSACNLIEAIQRNYRMVSLNLHGNKINRTVQKKI 425

Query: 464 SEVLKFHGNIN 474
             +++   N N
Sbjct: 426 DSLIEDRLNDN 436



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 158/322 (49%), Gaps = 5/322 (1%)

Query: 192 AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
            +EV    N I   G  A    +  ++ L+ L++ GN +  + V  L   +  +  + RL
Sbjct: 95  VQEVLLCFNDIGREGCDALSDAVNISVNLRLLDIRGNGLNAKCVNKLLKAVSSSMTLVRL 154

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLN 310
            L+S  L +EGA  +   L+ N+ L  L+L+ N I   G  S+A+ L + +S ++ + L 
Sbjct: 155 GLASNKLGEEGAMLVFRALEKNTFLTSLDLSLNEIGPGGAKSIAKLLEIPDSALKCVQLY 214

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           GNY G  G   +A  +  N+SL++L L  N+  DE    L   L S    L  LD+  N 
Sbjct: 215 GNYLGPSGVAVIALAVRRNRSLKQLTLGNNNATDEAAVQLAEML-SENSTLERLDLRLNV 273

Query: 371 ISAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGAEKIADA--LKQNRTITTIDLGGNNI 427
           I+A G   +A E +    SLL ++L  N IG  G E+I+ +  L Q   ++ +DL    +
Sbjct: 274 ITAVGIRTLAQEGLGQNGSLLSLSLAGNPIGSVGGEEISQSLILSQVTALSVLDLSSCQL 333

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
              G   +A ++  +S IT ++L+ N +  + + +++  +    +I+ L L   +IG   
Sbjct: 334 GPTGGMRVANLIATSSTITDVNLSDNKLDDEASVSIANSIINGLSISMLNLSRNEIGEWS 393

Query: 488 AEFVADMLRYNNTISILDLRAN 509
           A  + + ++ N  +  L+L  N
Sbjct: 394 ACNLIEAIQRNYRMVSLNLHGN 415



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 148/322 (45%), Gaps = 12/322 (3%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   V +   + G EG   L++++  +     +    NG+ A  +      + S++ L  
Sbjct: 94  AVQEVLLCFNDIGREGCDALSDAVNISVNLRLLDIRGNGLNAKCVNKLLKAVSSSMTLVR 153

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLEL 281
           L L+ N +G+EG   +   L  N  +  L LS  ++   GAK+IA+LL+  +S L+ ++L
Sbjct: 154 LGLASNKLGEEGAMLVFRALEKNTFLTSLDLSLNEIGPGGAKSIAKLLEIPDSALKCVQL 213

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N +  SG   +A A+  N +++ L L  N      A  LA+ L  N +L  L L  N 
Sbjct: 214 YGNYLGPSGVAVIALAVRRNRSLKQLTLGNNNATDEAAVQLAEMLSENSTLERLDLRLNV 273

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMNDI 399
           I   GIR L      + G L  L +  N I + G   +++   +    +L  ++L    +
Sbjct: 274 ITAVGIRTLAQEGLGQNGSLLSLSLAGNPIGSVGGEEISQSLILSQVTALSVLDLSSCQL 333

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G  G  ++A+ +  + TIT ++L  N +  + + +IA  + +   I+ L+L+ N IG   
Sbjct: 334 GPTGGMRVANLIATSSTITDVNLSDNKLDDEASVSIANSIINGLSISMLNLSRNEIGEWS 393

Query: 460 AKALSEV---------LKFHGN 472
           A  L E          L  HGN
Sbjct: 394 ACNLIEAIQRNYRMVSLNLHGN 415



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 149/294 (50%), Gaps = 13/294 (4%)

Query: 159 KELRAFSS------VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           K L+A SS      + ++    G+EG   +  +L  N     +  + N I   G K+   
Sbjct: 140 KLLKAVSSSMTLVRLGLASNKLGEEGAMLVFRALEKNTFLTSLDLSLNEIGPGGAKSIAK 199

Query: 213 VLQ-SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           +L+  + ALK + L GN +G  GV  +   +  N  +++L L + +  DE A  +AE+L 
Sbjct: 200 LLEIPDSALKCVQLYGNYLGPSGVAVIALAVRRNRSLKQLTLGNNNATDEAAVQLAEMLS 259

Query: 272 NNSILRVLELNNNMIDYSGFTSLA-EALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
            NS L  L+L  N+I   G  +LA E L +N ++ SL L GN  G++G   +++ L  ++
Sbjct: 260 ENSTLERLDLRLNVITAVGIRTLAQEGLGQNGSLLSLSLAGNPIGSVGGEEISQSLILSQ 319

Query: 331 --SLRELHLHGNSIGDE-GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
             +L  L L    +G   G+R  ++ L +    +  +++ +N +  + +  +A  I N  
Sbjct: 320 VTALSVLDLSSCQLGPTGGMR--VANLIATSSTITDVNLSDNKLDDEASVSIANSIINGL 377

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           S+  +NL  N+IG+  A  + +A+++N  + +++L GN I+      I  +++D
Sbjct: 378 SISMLNLSRNEIGEWSACNLIEAIQRNYRMVSLNLHGNKINRTVQKKIDSLIED 431



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 140/281 (49%), Gaps = 28/281 (9%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS--------------RKG------- 359
            +A+G EG + ++ +HL  N +G      ++S LS+              R+G       
Sbjct: 58  VIAEG-EGGQLVKTVHLSDNELGPTSSEKIISALSASAVQEVLLCFNDIGREGCDALSDA 116

Query: 360 -----KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
                 L +LDI  N ++AK    + + + +  +L+ + L  N +G+EGA  +  AL++N
Sbjct: 117 VNISVNLRLLDIRGNGLNAKCVNKLLKAVSSSMTLVRLGLASNKLGEEGAMLVFRALEKN 176

Query: 415 RTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
             +T++DL  N I   GA +IA++L+  +S +  + L  N +G  G   ++  ++ + ++
Sbjct: 177 TFLTSLDLSLNEIGPGGAKSIAKLLEIPDSALKCVQLYGNYLGPSGVAVIALAVRRNRSL 236

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
             L LG        A  +A+ML  N+T+  LDLR N +   G + LAQ     N +L S+
Sbjct: 237 KQLTLGNNNATDEAAVQLAEMLSENSTLERLDLRLNVITAVGIRTLAQEGLGQNGSLLSL 296

Query: 534 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            LA N I   G   I+Q+L  ++  A++ L+L++  L   G
Sbjct: 297 SLAGNPIGSVGGEEISQSLILSQVTALSVLDLSSCQLGPTG 337


>gi|156383354|ref|XP_001632799.1| predicted protein [Nematostella vectensis]
 gi|156219860|gb|EDO40736.1| predicted protein [Nematostella vectensis]
          Length = 249

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 1/187 (0%)

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N +SAKG+ ++ + + + KSL  ++L  N+I  EG   I++AL +N  I  +DL GN + 
Sbjct: 58  NDLSAKGSVYMGKVLVSNKSLKELDLANNNIRKEGVSAISNALVENTVIRRLDLSGNGLT 117

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            K A  +A  + +NS +  L+L+YN  G    + +   L ++  I  L L W QI   GA
Sbjct: 118 DKDAKILADAIGNNSTLRYLNLSYNKFGEKAGEVIGAALSYNNGITELNLSWNQIRRRGA 177

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           + +   LR N+T+ +LDL  NG  D G + L ++ K  N +L  ++L+ N + D G   I
Sbjct: 178 QGIHRSLRVNDTLEMLDLSWNGFDDFGTEDLMEALK-RNTSLIVLNLSNNRLTDRGILNI 236

Query: 549 AQALKAN 555
           A  L  N
Sbjct: 237 ANGLNGN 243



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 3/209 (1%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           I +  + A G   VA  +++  S   + +  ND+  +G+  +   L  N+++  +DL  N
Sbjct: 27  INHRYLRALGTKAVASILRSTDSTSKVQMSFNDLSAKGSVYMGKVLVSNKSLKELDLANN 86

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           NI  +G SAI+  L +N+VI  LDL+ N +    AK L++ +  +  +  L L + + G 
Sbjct: 87  NIRKEGVSAISNALVENTVIRRLDLSGNGLTDKDAKILADAIGNNSTLRYLNLSYNKFGE 146

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
              E +   L YNN I+ L+L  N +R  GA+ + +S +V N+ L  +DL++N   D G 
Sbjct: 147 KAGEVIGAALSYNNGITELNLSWNQIRRRGAQGIHRSLRV-NDTLEMLDLSWNGFDDFGT 205

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFG 574
             + +ALK N  + V  LNL+NN LT  G
Sbjct: 206 EDLMEALKRNTSLIV--LNLSNNRLTDRG 232



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 111/227 (48%), Gaps = 2/227 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           ++ F KE+ A   V ++ R     G   +A  L    +  +V  + N ++A G      V
Sbjct: 13  VSRFGKEIGA-EEVKINHRYLRALGTKAVASILRSTDSTSKVQMSFNDLSAKGSVYMGKV 71

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L SN +LK L+L+ N I  EGV  + + LV+N  + RL LS   L D+ AK +A+ + NN
Sbjct: 72  LVSNKSLKELDLANNNIRKEGVSAISNALVENTVIRRLDLSGNGLTDKDAKILADAIGNN 131

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           S LR L L+ N         +  AL  N+ I  L+L+ N     GA  + + L  N +L 
Sbjct: 132 STLRYLNLSYNKFGEKAGEVIGAALSYNNGITELNLSWNQIRRRGAQGIHRSLRVNDTLE 191

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            L L  N   D G   LM  L  R   L VL++ NN ++ +G  ++A
Sbjct: 192 MLDLSWNGFDDFGTEDLMEAL-KRNTSLIVLNLSNNRLTDRGILNIA 237



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 1/226 (0%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           +++N+  +   G  ++A  L    +   + ++ N   A G+  + K L  NKSL+EL L 
Sbjct: 25  VKINHRYLRALGTKAVASILRSTDSTSKVQMSFNDLSAKGSVYMGKVLVSNKSLKELDLA 84

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N+I  EG+ A+ + L      +  LD+  N ++ K A  +A+ I N  +L ++NL  N 
Sbjct: 85  NNNIRKEGVSAISNALVENT-VIRRLDLSGNGLTDKDAKILADAIGNNSTLRYLNLSYNK 143

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            G++  E I  AL  N  IT ++L  N I  +GA  I R L+ N  +  LDL++N     
Sbjct: 144 FGEKAGEVIGAALSYNNGITELNLSWNQIRRRGAQGIHRSLRVNDTLEMLDLSWNGFDDF 203

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           G + L E LK + ++  L L   ++   G   +A+ L  N T+  L
Sbjct: 204 GTEDLMEALKRNTSLIVLNLSNNRLTDRGILNIANGLNGNTTLEEL 249



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 92/191 (48%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V MS  +   +G  ++ + L  N++ +E+  A N I   G+ A    L  N  ++ L+
Sbjct: 51  SKVQMSFNDLSAKGSVYMGKVLVSNKSLKELDLANNNIRKEGVSAISNALVENTVIRRLD 110

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LSGN + D+  K L D + +N+ +  L LS     ++  + I   L  N+ +  L L+ N
Sbjct: 111 LSGNGLTDKDAKILADAIGNNSTLRYLNLSYNKFGEKAGEVIGAALSYNNGITELNLSWN 170

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G   +  +L  N T+  L L+ N     G   L + L+ N SL  L+L  N + D
Sbjct: 171 QIRRRGAQGIHRSLRVNDTLEMLDLSWNGFDDFGTEDLMEALKRNTSLIVLNLSNNRLTD 230

Query: 345 EGIRALMSGLS 355
            GI  + +GL+
Sbjct: 231 RGILNIANGLN 241



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 86/174 (49%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++   +D++  N   EG+  ++ +L  N     +  + NG+T    K     + +N  L+
Sbjct: 76  KSLKELDLANNNIRKEGVSAISNALVENTVIRRLDLSGNGLTDKDAKILADAIGNNSTLR 135

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNLS N  G++  + +   L  N G+  L LS   +R  GA+ I   L+ N  L +L+L
Sbjct: 136 YLNLSYNKFGEKAGEVIGAALSYNNGITELNLSWNQIRRRGAQGIHRSLRVNDTLEMLDL 195

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + N  D  G   L EAL  N+++  L+L+ N     G   +A GL GN +L EL
Sbjct: 196 SWNGFDDFGTEDLMEALKRNTSLIVLNLSNNRLTDRGILNIANGLNGNTTLEEL 249


>gi|156392777|ref|XP_001636224.1| predicted protein [Nematostella vectensis]
 gi|156223325|gb|EDO44161.1| predicted protein [Nematostella vectensis]
          Length = 248

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 139/273 (50%), Gaps = 33/273 (12%)

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           LKNNS L  ++++ N +  +  + LAE L++N+++  ++++G Y G  G  ++AK L  N
Sbjct: 9   LKNNSTLSTIDISVNSLADACASELAEVLVDNTSLNDVYISGEYLGDAGVASIAKALMVN 68

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            ++R L + G ++  E  RAL                              E +++  ++
Sbjct: 69  TTVRTLEIIGRNMTAEAGRAL-----------------------------GEMLRHNTTI 99

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             ++L   +IGD GA+ IA  L QN T+  I +  + I + G SA+A+V+++    T LD
Sbjct: 100 TCLSLCDGNIGDSGAQGIASGLSQNTTLEKIQIEYSCIGATGVSALAKVIQN---ATHLD 156

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L+ N IG  GAKA+++V+K    +  L++  C I   G   +A  L  N  +  L +   
Sbjct: 157 LSRNIIGTKGAKAIAKVIKNSCKLKYLRIDCCNIDVLGVRDLAKALSKNKNLEELSVACA 216

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           G+ DEG   LA+S    N++L  + + +N I +
Sbjct: 217 GIDDEGMCELARSV-AKNKSLQVLTITYNNISE 248



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 120/274 (43%), Gaps = 32/274 (11%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           L +SL  N T   +  + N +  A       VL  N +L  + +SG  +GD GV  +   
Sbjct: 5   LFKSLKNNSTLSTIDISVNSLADACASELAEVLVDNTSLNDVYISGEYLGDAGVASIAKA 64

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L+ N  V  L++   ++  E  +A+ E+L++N+ +  L L                    
Sbjct: 65  LMVNTTVRTLEIIGRNMTAEAGRALGEMLRHNTTITCLSL-------------------- 104

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
                   +GN G + GA  +A GL  N +L ++ +  + IG  G+ AL   + +     
Sbjct: 105 -------CDGNIGDS-GAQGIASGLSQNTTLEKIQIEYSCIGATGVSALAKVIQNATH-- 154

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             LD+  N I  KGA  +A+ IKN   L ++ +   +I   G   +A AL +N+ +  + 
Sbjct: 155 --LDLSRNIIGTKGAKAIAKVIKNSCKLKYLRIDCCNIDVLGVRDLAKALSKNKNLEELS 212

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           +    I  +G   +AR +  N  +  L + YN I
Sbjct: 213 VACAGIDDEGMCELARSVAKNKSLQVLTITYNNI 246



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 4/210 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + V +SG   GD G+  +A++L  N T   +      +TA   +A   +L+ N  +  
Sbjct: 42  SLNDVYISGEYLGDAGVASIAKALMVNTTVRTLEIIGRNMTAEAGRALGEMLRHNTTITC 101

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L    IGD G + +   L  N  +E++Q+    +   G  A+A++++N +    L+L+
Sbjct: 102 LSLCDGNIGDSGAQGIASGLSQNTTLEKIQIEYSCIGATGVSALAKVIQNAT---HLDLS 158

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N+I   G  ++A+ +  +  ++ L ++      LG   LAK L  NK+L EL +    I
Sbjct: 159 RNIIGTKGAKAIAKVIKNSCKLKYLRIDCCNIDVLGVRDLAKALSKNKNLEELSVACAGI 218

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            DEG+  L   ++  K  L VL I  N+IS
Sbjct: 219 DDEGMCELARSVAKNK-SLQVLTITYNNIS 247



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 4/238 (1%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S++D+S  +  D     LAE L  N +  +V  +   +  AG+ +    L  N  ++TL
Sbjct: 15  LSTIDISVNSLADACASELAEVLVDNTSLNDVYISGEYLGDAGVASIAKALMVNTTVRTL 74

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            + G  +  E  + L ++L  N  +  L L   ++ D GA+ IA  L  N+ L  +++  
Sbjct: 75  EIIGRNMTAEAGRALGEMLRHNTTITCLSLCDGNIGDSGAQGIASGLSQNTTLEKIQIEY 134

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           + I  +G ++LA+ +++N+T   L L+ N  G  GA A+AK ++ +  L+ L +   +I 
Sbjct: 135 SCIGATGVSALAK-VIQNAT--HLDLSRNIIGTKGAKAIAKVIKNSCKLKYLRIDCCNID 191

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
             G+R L   LS  K  L  L +    I  +G   +A  +   KSL  + +  N+I +
Sbjct: 192 VLGVRDLAKALSKNK-NLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYNNISE 248



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 4/171 (2%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +KN  +L  I++ +N + D  A ++A+ L  N ++  + + G  +   G ++IA+ L  N
Sbjct: 9   LKNNSTLSTIDISVNSLADACASELAEVLVDNTSLNDVYISGEYLGDAGVASIAKALMVN 68

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + + +L++    + A+  +AL E+L+ +  I  L L    IG SGA+ +A  L  N T+ 
Sbjct: 69  TTVRTLEIIGRNMTAEAGRALGEMLRHNTTITCLSLCDGNIGDSGAQGIASGLSQNTTLE 128

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            + +  + +   G   LA   KV+  A T +DL+ N I   GA AIA+ +K
Sbjct: 129 KIQIEYSCIGATGVSALA---KVIQNA-THLDLSRNIIGTKGAKAIAKVIK 175



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 6/169 (3%)

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           +LK N T++TID+  N++    AS +A VL DN+ +  + ++   +G  G  ++++ L  
Sbjct: 8   SLKNNSTLSTIDISVNSLADACASELAEVLVDNTSLNDVYISGEYLGDAGVASIAKALMV 67

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +  + TL++    + A     + +MLR+N TI+ L L    + D GA+ +A      N  
Sbjct: 68  NTTVRTLEIIGRNMTAEAGRALGEMLRHNTTITCLSLCDGNIGDSGAQGIASGLS-QNTT 126

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           L  I + ++ I   G  A+A+ ++       T L+L+ N +   G  A+
Sbjct: 127 LEKIQIEYSCIGATGVSALAKVIQ-----NATHLDLSRNIIGTKGAKAI 170



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 31/196 (15%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+ + L E  +     + + +   N GD G   +A  L  N T E++    + I A G+ 
Sbjct: 84  EAGRALGEMLRHNTTITCLSLCDGNIGDSGAQGIASGLSQNTTLEKIQIEYSCIGATGVS 143

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   V+Q+      L+LS N IG                             +GAKAIA+
Sbjct: 144 ALAKVIQN---ATHLDLSRNIIG----------------------------TKGAKAIAK 172

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           ++KN+  L+ L ++   ID  G   LA+AL +N  +  L +        G   LA+ +  
Sbjct: 173 VIKNSCKLKYLRIDCCNIDVLGVRDLAKALSKNKNLEELSVACAGIDDEGMCELARSVAK 232

Query: 329 NKSLRELHLHGNSIGD 344
           NKSL+ L +  N+I +
Sbjct: 233 NKSLQVLTITYNNISE 248


>gi|57529989|ref|NP_001006473.1| ribonuclease inhibitor [Gallus gallus]
 gi|53134140|emb|CAG32305.1| hypothetical protein RCJMB04_22k18 [Gallus gallus]
          Length = 456

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 189/408 (46%), Gaps = 11/408 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN-GITAAGIKAFDGVLQSNIALK 221
           +   + ++    GD G+ +L + L     + +  +  N  +T+A  +    VL +  +L 
Sbjct: 52  SLKELKLNNNELGDAGIEYLCKGLLTPSCSLQKLWLQNCNLTSASCETLRSVLSAQPSLT 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L++  N +G  GVK LC  L++ N  +++LQL   +L  +  +A+   L+    L+ L 
Sbjct: 112 ELHVGDNKLGTAGVKVLCQGLMNPNCKLQKLQLEYCELTADIVEALNAALQAKPTLKELS 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           L+NN +  +    L   L+E S  +  LHL      +     ++  L    SL +L +  
Sbjct: 172 LSNNTLGDTAVKQLCRGLVEASCDLELLHLENCGITSDSCRDISAVLSSKPSLLDLAVGD 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G+  L  GL     K+  L + +  +++     ++      ++LL ++L  N++
Sbjct: 232 NKIGDTGLALLCQGLLHPNCKIQKLWLWDCDLTSASCKDLSRVFSTKETLLEVSLIDNNL 291

Query: 400 GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            D G E +  ALK  +  +  + +    + +    A++ VL  N  +  L +  N +G  
Sbjct: 292 RDSGMEMLCQALKDPKAHLQELWVRECGLTAACCKAVSSVLSVNKHLQVLHIGENKLGNA 351

Query: 459 GAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + L E +L  + NI++L LG C I A+    +A+++     ++ LDL  N L DEG  
Sbjct: 352 GVEILCEGLLHPNCNIHSLWLGNCDITAACCATLANVMVTKQNLTELDLSYNTLEDEGVM 411

Query: 518 CLAQSFKVVN---EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L ++ +  N   + L   D+ +    DD   A+ +   A  DV + S
Sbjct: 412 KLCEAVRNPNCKMQQLILYDIFWGPEVDDELKALEE---ARPDVKIIS 456



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 94/406 (23%), Positives = 178/406 (43%), Gaps = 38/406 (9%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-I 241
           AE L   ++   +      ++++  K    ++ +N +LK L L+ N +GD G++ LC  +
Sbjct: 16  AELLSTMKSCSTIRLDDCNLSSSNCKDLSSIIHTNPSLKELKLNNNELGDAGIEYLCKGL 75

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-E 300
           L  +  +++L L + +L     + +  +L     L  L + +N +  +G   L + L+  
Sbjct: 76  LTPSCSLQKLWLQNCNLTSASCETLRSVLSAQPSLTELHVGDNKLGTAGVKVLCQGLMNP 135

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           N  ++ L L      A    AL   L+   +L+EL L  N++GD  ++ L  GL      
Sbjct: 136 NCKLQKLQLEYCELTADIVEALNAALQAKPTLKELSLSNNTLGDTAVKQLCRGLVEASCD 195

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG----------------- 403
           L +L + N  I++     ++  + +  SLL + +  N IGD G                 
Sbjct: 196 LELLHLENCGITSDSCRDISAVLSSKPSLLDLAVGDNKIGDTGLALLCQGLLHPNCKIQK 255

Query: 404 ------------AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD-NSVITSLDL 450
                        + ++       T+  + L  NN+   G   + + LKD  + +  L +
Sbjct: 256 LWLWDCDLTSASCKDLSRVFSTKETLLEVSLIDNNLRDSGMEMLCQALKDPKAHLQELWV 315

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD-MLRYNNTISILDLRAN 509
               + A   KA+S VL  + ++  L +G  ++G +G E + + +L  N  I  L L   
Sbjct: 316 RECGLTAACCKAVSSVLSVNKHLQVLHIGENKLGNAGVEILCEGLLHPNCNIHSLWL--- 372

Query: 510 GLRDEGAKCLAQ--SFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
           G  D  A C A   +  V  + LT +DL++N + D+G   + +A++
Sbjct: 373 GNCDITAACCATLANVMVTKQNLTELDLSYNTLEDEGVMKLCEAVR 418



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 4/327 (1%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITA 204
           L   S +TL        + + + +     G  G+  L + L   N   +++      +TA
Sbjct: 92  LTSASCETLRSVLSAQPSLTELHVGDNKLGTAGVKVLCQGLMNPNCKLQKLQLEYCELTA 151

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGA 263
             ++A +  LQ+   LK L+LS N +GD  VK LC  LV+ +  +E L L +  +  +  
Sbjct: 152 DIVEALNAALQAKPTLKELSLSNNTLGDTAVKQLCRGLVEASCDLELLHLENCGITSDSC 211

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
           + I+ +L +   L  L + +N I  +G   L + LL  N  I+ L L      +     L
Sbjct: 212 RDISAVLSSKPSLLDLAVGDNKIGDTGLALLCQGLLHPNCKIQKLWLWDCDLTSASCKDL 271

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           ++     ++L E+ L  N++ D G+  L   L   K  L  L +    ++A     V+  
Sbjct: 272 SRVFSTKETLLEVSLIDNNLRDSGMEMLCQALKDPKAHLQELWVRECGLTAACCKAVSSV 331

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           +   K L  +++  N +G+ G E + +  L  N  I ++ LG  +I +   + +A V+  
Sbjct: 332 LSVNKHLQVLHIGENKLGNAGVEILCEGLLHPNCNIHSLWLGNCDITAACCATLANVMVT 391

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLK 468
              +T LDL+YN +  +G   L E ++
Sbjct: 392 KQNLTELDLSYNTLEDEGVMKLCEAVR 418



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 123/306 (40%), Gaps = 35/306 (11%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L++    ++ S +  L   +   STIR   L+     +     L+  +  N SL+EL L+
Sbjct: 3   LDIQCEEMNPSRWAELLSTMKSCSTIR---LDDCNLSSSNCKDLSSIIHTNPSLKELKLN 59

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA---------------FHVAEY- 382
            N +GD GI  L  GL +    L  L + N ++++                   HV +  
Sbjct: 60  NNELGDAGIEYLCKGLLTPSCSLQKLWLQNCNLTSASCETLRSVLSAQPSLTELHVGDNK 119

Query: 383 -----IKN-CKSLLWINLYMNDIGDEGAEKIAD-------ALKQNRTITTIDLGGNNIHS 429
                +K  C+ L+  N  +  +  E  E  AD       AL+   T+  + L  N +  
Sbjct: 120 LGTAGVKVLCQGLMNPNCKLQKLQLEYCELTADIVEALNAALQAKPTLKELSLSNNTLGD 179

Query: 430 KGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
                + R L + S  +  L L    I +D  + +S VL    ++  L +G  +IG +G 
Sbjct: 180 TAVKQLCRGLVEASCDLELLHLENCGITSDSCRDISAVLSSKPSLLDLAVGDNKIGDTGL 239

Query: 489 EFVAD-MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
             +   +L  N  I  L L    L     K L++ F    E L  + L  N +RD G   
Sbjct: 240 ALLCQGLLHPNCKIQKLWLWDCDLTSASCKDLSRVFS-TKETLLEVSLIDNNLRDSGMEM 298

Query: 548 IAQALK 553
           + QALK
Sbjct: 299 LCQALK 304


>gi|402876801|ref|XP_003902142.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Papio anubis]
          Length = 471

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 133/262 (50%), Gaps = 3/262 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 151

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  +E A  +  AL  N  I  +DL  N
Sbjct: 152 SNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 212 QFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 272 EGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLES-NESLRVLKLFLNPISMDGA 330

Query: 546 FAIAQALKANEDVAVTSLNLAN 567
             +  A+K N    +  L+++N
Sbjct: 331 ILLILAIKRNPKSRMEELDISN 352



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 30/264 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 104 GTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 163

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   +E    L   LS+   ++  LD+ +N  S        
Sbjct: 164 ISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNY-RIKKLDLSHNQFS-------- 214

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E++   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 215 --------------------DIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 254

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N +G +GA AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 255 GNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNES 314

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           + +L L  N +  +GA  L  + K
Sbjct: 315 LRVLKLFLNPISMDGAILLILAIK 338



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 131/252 (51%), Gaps = 7/252 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +  +   + +E  +S   L+ HG  +G  G +A+   L S    +  L++ +N I  +
Sbjct: 77  GVVPVSYFIRNME--ESYVNLNHHG--LGPRGTKAIAIALVSNTA-VTKLELEDNCIMEE 131

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
           G   + E ++    L  +N+  N +G EGA  I+D  ++N + I  ++L GN+   + A+
Sbjct: 132 GVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAA 191

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            + + L  N  I  LDL++N     G + L ++L  +  + +L L W      GA  + +
Sbjct: 192 PLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCN 251

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            LR N T++ LDL  NGL +EGA  L +  + +N  L  +D+  N+I ++GA  I++ L+
Sbjct: 252 GLRGNVTLTKLDLSMNGLGNEGAVALGEVLR-LNSCLVYLDVGGNDIGNEGASKISKGLE 310

Query: 554 ANEDVAVTSLNL 565
           +NE + V  L L
Sbjct: 311 SNESLRVLKLFL 322



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 91  SYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D ++E A  + + L  N  ++ L+L++
Sbjct: 151 ISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N +G
Sbjct: 211 NQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+G N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 271 NEGAVALGEVLRLNSC-LVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDG 329

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 330 AILLILAIKRN 340



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKL 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 207 DLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 265

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N +  +GA  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 266 MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
              GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 326 SMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 376



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 128 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKE 187

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 188 ESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAV 247

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N +   G  +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 248 ALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISK 307

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 308 GLESNESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 358


>gi|356535989|ref|XP_003536523.1| PREDICTED: RAN GTPase-activating protein 1-like [Glycine max]
          Length = 534

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 162/327 (49%), Gaps = 32/327 (9%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F   L+ ++ L+ LNLS N +G++GV+    +L     +E L L +  + +E AKA++EL
Sbjct: 207 FSSALEGSV-LRYLNLSNNAMGEKGVRAFRSLLKSQINLEELYLMNDGISEEAAKAVSEL 265

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           L +   LRVL  +NNM    G  ++AE +  +  +     +    G+ G  AL + L   
Sbjct: 266 LPSTEKLRVLHFHNNMTGDEGAIAIAEIVKRSPALEDFRCSSTRVGSDGGVALVEALGDC 325

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K LR+L L  N  G+E      +G++  K   A  D+    +S                 
Sbjct: 326 KHLRKLDLRDNMFGEE------AGVALSKVVPAFTDLTEIYLS----------------- 362

Query: 390 LWINLYMNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
                Y+N + D+GAE +A+ALK++  ++  +DL GN+I +K A+++A  +     +T L
Sbjct: 363 -----YLN-LEDDGAEALANALKESAPSLEILDLAGNDITAKAAASVAACISSKQFLTKL 416

Query: 449 DLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           +L+ N +  +G   +S+ L+  HG +  + L    I  SGA+ VA+ +       +L++ 
Sbjct: 417 NLSENELKDEGVVLISKALEGGHGQLIEVDLSTNSITWSGAKLVAEAVVGKPGFKLLNIN 476

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSID 534
           AN + DEG   L   FK   + L  +D
Sbjct: 477 ANFISDEGIDELKNIFKNSPDMLGPLD 503



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 132/275 (48%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S I L+ L L  + I +E  K + ++L     +  L   
Sbjct: 219 LNLSNNAMGEKGVRAFRSLLKSQINLEELYLMNDGISEEAAKAVSELLPSTEKLRVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K +  L     ++  +   G  +L EAL +   +R L L  N  
Sbjct: 279 NNMTGDEGAIAIAEIVKRSPALEDFRCSSTRVGSDGGVALVEALGDCKHLRKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K +     L E++L   ++ D+G  AL + L      L +LD+  N I+AK
Sbjct: 339 GEEAGVALSKVVPAFTDLTEIYLSYLNLEDDGAEALANALKESAPSLEILDLAGNDITAK 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGAS 433
            A  VA  I + + L  +NL  N++ DEG   I+ AL+     +  +DL  N+I   GA 
Sbjct: 399 AAASVAACISSKQFLTKLNLSENELKDEGVVLISKALEGGHGQLIEVDLSTNSITWSGAK 458

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            +A  +        L++  N I  +G   L  + K
Sbjct: 459 LVAEAVVGKPGFKLLNINANFISDEGIDELKNIFK 493



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 135/277 (48%), Gaps = 4/277 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S +R L+L+ N  G  G  A    L+   +L EL+L  + I +E  +A+   L S +
Sbjct: 211 LEGSVLRYLNLSNNAMGEKGVRAFRSLLKSQINLEELYLMNDGISEEAAKAVSELLPSTE 270

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE +K   +L         +G +G   + +AL   + + 
Sbjct: 271 -KLRVLHFHNNMTGDEGAIAIAEIVKRSPALEDFRCSSTRVGSDGGVALVEALGDCKHLR 329

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +   A+++V+   + +T + L+Y  +  DGA+AL+  LK    ++  L 
Sbjct: 330 KLDLRDNMFGEEAGVALSKVVPAFTDLTEIYLSYLNLEDDGAEALANALKESAPSLEILD 389

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           L    I A  A  VA  +     ++ L+L  N L+DEG   ++++ +  +  L  +DL+ 
Sbjct: 390 LAGNDITAKAAASVAACISSKQFLTKLNLSENELKDEGVVLISKALEGGHGQLIEVDLST 449

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           N I   GA  +A+A+       +  LN+  NF++  G
Sbjct: 450 NSITWSGAKLVAEAVVGKPGFKL--LNINANFISDEG 484



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 27/238 (11%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G  A    L     L+ L+L  N  G+E 
Sbjct: 283 GDEGAIAIAEIVKRSPALEDFRCSSTRVGSDGGVALVEALGDCKHLRKLDLRDNMFGEEA 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
              L  ++     +  + LS ++L D+GA+A+A  LK ++                    
Sbjct: 343 GVALSKVVPAFTDLTEIYLSYLNLEDDGAEALANALKESA-------------------- 382

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
                   ++  L L GN   A  A ++A  +   + L +L+L  N + DEG+  +   L
Sbjct: 383 -------PSLEILDLAGNDITAKAAASVAACISSKQFLTKLNLSENELKDEGVVLISKAL 435

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
               G+L  +D+  NSI+  GA  VAE +        +N+  N I DEG +++ +  K
Sbjct: 436 EGGHGQLIEVDLSTNSITWSGAKLVAEAVVGKPGFKLLNINANFISDEGIDELKNIFK 493


>gi|154339185|ref|XP_001562284.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134062867|emb|CAM39314.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 417

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 175/364 (48%), Gaps = 7/364 (1%)

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           +++  ++ ++   N +G  G   +   L +++ V ++ +   D+  EG   +AE++  ++
Sbjct: 24  KTDAPIRAVDFMDNQLGPTGALRIASCL-ESSPVTKVLICYNDIGKEGCDGLAEVVNLSN 82

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L VL++  N +  S    L  ++  ++++  L L  N  G  GA  +AK LE N  L  
Sbjct: 83  SLHVLDIRGNRLSASDAHRLLRSVSLSTSLTRLGLASNRLGPEGAALVAKVLESNTYLSS 142

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N +G  G   +   L +    L VL +  N + A G   + + +K  K L  + L
Sbjct: 143 LDLSVNELGASGAEYIAGALRNPASALQVLQLHGNYLGATGVTMICDAVKTNKELKRLTL 202

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYN 453
             N   DE A  IA  L  N  +  +D+  N + ++G   IA+  L  N+ +  L L+ N
Sbjct: 203 GNNHATDEAASAIAAMLNANYILEELDIRLNTLTTRGVKTIAQQGLAKNTTLRMLSLSGN 262

Query: 454 PIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            +G  GA  L+ VL  H    +  L L  C + +SG   +A +L  + ++  ++L  N L
Sbjct: 263 EVGHAGANELTHVLASHQRSALGHLDLSSCGLTSSGGVQIARLLSMSISLKEINLSDNAL 322

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            DE A  LAQS    + +++ +DL+ NEI ++GA  +  A+  N  +A    N   N ++
Sbjct: 323 DDEAAVRLAQSI-ADSISISVVDLSCNEIGEEGASQLIGAVLRNAQLAALVTN--GNNIS 379

Query: 572 KFGQ 575
           +  Q
Sbjct: 380 RVAQ 383



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 145/284 (51%), Gaps = 7/284 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI-ALK 221
           + + + ++    G EG   +A+ L  N     +  + N + A+G +   G L++   AL+
Sbjct: 111 SLTRLGLASNRLGPEGAALVAKVLESNTYLSSLDLSVNELGASGAEYIAGALRNPASALQ 170

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L GN +G  GV  +CD +  N  ++RL L +    DE A AIA +L  N IL  L++
Sbjct: 171 VLQLHGNYLGATGVTMICDAVKTNKELKRLTLGNNHATDEAASAIAAMLNANYILEELDI 230

Query: 282 NNNMIDYSGFTSLAE-ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
             N +   G  ++A+  L +N+T+R L L+GN  G  GAN L   L  ++     HL  +
Sbjct: 231 RLNTLTTRGVKTIAQQGLAKNTTLRMLSLSGNEVGHAGANELTHVLASHQRSALGHLDLS 290

Query: 341 SIG---DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           S G     G++  ++ L S    L  +++ +N++  + A  +A+ I +  S+  ++L  N
Sbjct: 291 SCGLTSSGGVQ--IARLLSMSISLKEINLSDNALDDEAAVRLAQSIADSISISVVDLSCN 348

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           +IG+EGA ++  A+ +N  +  +   GNNI       I  VL++
Sbjct: 349 EIGEEGASQLIGAVLRNAQLAALVTNGNNISRVAQKKIDNVLEE 392



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 142/296 (47%), Gaps = 5/296 (1%)

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           ++ IR++    N  G  GA  +A  LE +   + L  + N IG EG   L + + +    
Sbjct: 26  DAPIRAVDFMDNQLGPTGALRIASCLESSPVTKVLICY-NDIGKEGCDGL-AEVVNLSNS 83

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L VLDI  N +SA  A  +   +    SL  + L  N +G EGA  +A  L+ N  ++++
Sbjct: 84  LHVLDIRGNRLSASDAHRLLRSVSLSTSLTRLGLASNRLGPEGAALVAKVLESNTYLSSL 143

Query: 421 DLGGNNIHSKGASAIARVLKDN-SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           DL  N + + GA  IA  L++  S +  L L  N +GA G   + + +K +  +  L LG
Sbjct: 144 DLSVNELGASGAEYIAGALRNPASALQVLQLHGNYLGATGVTMICDAVKTNKELKRLTLG 203

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
                   A  +A ML  N  +  LD+R N L   G K +AQ     N  L  + L+ NE
Sbjct: 204 NNHATDEAASAIAAMLNANYILEELDIRLNTLTTRGVKTIAQQGLAKNTTLRMLSLSGNE 263

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 595
           +   GA  +   L +++  A+  L+L++  LT  G   +  A+ L   +S KE+N+
Sbjct: 264 VGHAGANELTHVLASHQRSALGHLDLSSCGLTSSG--GVQIARLLSMSISLKEINL 317



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 149/327 (45%), Gaps = 31/327 (9%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G EG   LAE +  + +   +    N ++A+        +  + +L  L L+ N +G 
Sbjct: 65  DIGKEGCDGLAEVVNLSNSLHVLDIRGNRLSASDAHRLLRSVSLSTSLTRLGLASNRLGP 124

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSGF 291
           EG   +  +L  N  +  L LS  +L   GA+ IA  L+N  S L+VL+L+ N +  +G 
Sbjct: 125 EGAALVAKVLESNTYLSSLDLSVNELGASGAEYIAGALRNPASALQVLQLHGNYLGATGV 184

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALA---------------------------- 323
           T + +A+  N  ++ L L  N+     A+A+A                            
Sbjct: 185 TMICDAVKTNKELKRLTLGNNHATDEAASAIAAMLNANYILEELDIRLNTLTTRGVKTIA 244

Query: 324 -KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS-RKGKLAVLDIGNNSISAKGAFHVAE 381
            +GL  N +LR L L GN +G  G   L   L+S ++  L  LD+ +  +++ G   +A 
Sbjct: 245 QQGLAKNTTLRMLSLSGNEVGHAGANELTHVLASHQRSALGHLDLSSCGLTSSGGVQIAR 304

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +    SL  INL  N + DE A ++A ++  + +I+ +DL  N I  +GAS +   +  
Sbjct: 305 LLSMSISLKEINLSDNALDDEAAVRLAQSIADSISISVVDLSCNEIGEEGASQLIGAVLR 364

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLK 468
           N+ + +L    N I     K +  VL+
Sbjct: 365 NAQLAALVTNGNNISRVAQKKIDNVLE 391



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 160/338 (47%), Gaps = 7/338 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             +VD      G  G   +A  L  +    +V    N I   G      V+  + +L  L
Sbjct: 29  IRAVDFMDNQLGPTGALRIASCL-ESSPVTKVLICYNDIGKEGCDGLAEVVNLSNSLHVL 87

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++ GN +       L   +  +  + RL L+S  L  EGA  +A++L++N+ L  L+L+ 
Sbjct: 88  DIRGNRLSASDAHRLLRSVSLSTSLTRLGLASNRLGPEGAALVAKVLESNTYLSSLDLSV 147

Query: 284 NMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           N +  SG   +A AL    S ++ L L+GNY GA G   +   ++ NK L+ L L  N  
Sbjct: 148 NELGASGAEYIAGALRNPASALQVLQLHGNYLGATGVTMICDAVKTNKELKRLTLGNNHA 207

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY-IKNCKSLLWINLYMNDIGD 401
            DE   A+ + L++    L  LDI  N+++ +G   +A+  +    +L  ++L  N++G 
Sbjct: 208 TDEAASAIAAMLNANY-ILEELDIRLNTLTTRGVKTIAQQGLAKNTTLRMLSLSGNEVGH 266

Query: 402 EGAEKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            GA ++   L   Q   +  +DL    + S G   IAR+L  +  +  ++L+ N +  + 
Sbjct: 267 AGANELTHVLASHQRSALGHLDLSSCGLTSSGGVQIARLLSMSISLKEINLSDNALDDEA 326

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGA-EFVADMLR 496
           A  L++ +    +I+ + L   +IG  GA + +  +LR
Sbjct: 327 AVRLAQSIADSISISVVDLSCNEIGEEGASQLIGAVLR 364



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 6/187 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSN 217
           KEL+  +   +   +  DE    +A  L  N   EE+    N +T  G+K      L  N
Sbjct: 195 KELKRLT---LGNNHATDEAASAIAAMLNANYILEELDIRLNTLTTRGVKTIAQQGLAKN 251

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
             L+ L+LSGN +G  G   L  +L  +  + +  L LSS  L   G   IA LL  +  
Sbjct: 252 TTLRMLSLSGNEVGHAGANELTHVLASHQRSALGHLDLSSCGLTSSGGVQIARLLSMSIS 311

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+ + L++N +D      LA+++ ++ +I  + L+ N  G  GA+ L   +  N  L  L
Sbjct: 312 LKEINLSDNALDDEAAVRLAQSIADSISISVVDLSCNEIGEEGASQLIGAVLRNAQLAAL 371

Query: 336 HLHGNSI 342
             +GN+I
Sbjct: 372 VTNGNNI 378


>gi|145529231|ref|XP_001450404.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418015|emb|CAK83007.1| unnamed protein product [Paramecium tetraurelia]
          Length = 399

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 13/299 (4%)

Query: 176 DEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           D+ L  L   L  Y    + +  + N IT  GI+     L     L++LNL  N IG EG
Sbjct: 58  DQDLILLLSCLQNYKDYIQHIDLSFNEITNVGIQELSKFLSGCNTLESLNLQSNKIGVEG 117

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            + + + + D   +  L L+  +L+ +GA +I E+L NN  +  L L NN ID+ G  ++
Sbjct: 118 GELIAEGIKDIQTLTHLNLNFNNLQTKGAMSIVEMLFNNKTILELNLANNGIDHDGVIAI 177

Query: 295 AEAL-LENSTIRSLHLNGNYGGALG---ANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              L  +N++++ L+L+     ++G   A    K    N+ L ++ L  ++   + I  +
Sbjct: 178 TSILNWKNNSLQILNLDNPVYHSIGQETAIHFGKMFHSNRGLEKISLQKHNFTCDAIYII 237

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNC--KSLLWINLYMNDIGDEGAEK 406
              L     KL VLD+  N IS KG   +A+Y+  + C  +SL+   L  N  G  GA+ 
Sbjct: 238 TEHL-LENNKLRVLDLTANRISFKGCEAIAKYLCGEYCVLESLI---LTSNRTGHYGAKA 293

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
           I+ AL +NRT+  +D+  N+I   G   IA  L+ N ++ SL L  N  G    +A  +
Sbjct: 294 ISQALSKNRTLIHLDMVRNDIDDNGLKMIAESLETNDMLVSLKLYQNHFGQMALQAFHK 352



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 6/242 (2%)

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D+ +  L+S L + K  +  +D+  N I+  G   +++++  C +L  +NL  N IG EG
Sbjct: 58  DQDLILLLSCLQNYKDYIQHIDLSFNEITNVGIQELSKFLSGCNTLESLNLQSNKIGVEG 117

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            E IA+ +K  +T+T ++L  NN+ +KGA +I  +L +N  I  L+LA N I  DG  A+
Sbjct: 118 GELIAEGIKDIQTLTHLNLNFNNLQTKGAMSIVEMLFNNKTILELNLANNGIDHDGVIAI 177

Query: 464 SEVLKFHGN-INTLKLG---WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           + +L +  N +  L L    +  IG   A     M   N  +  + L+ +    +    +
Sbjct: 178 TSILNWKNNSLQILNLDNPVYHSIGQETAIHFGKMFHSNRGLEKISLQKHNFTCDAIYII 237

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
            +   + N  L  +DL  N I   G  AIA+ L   E   + SL L +N    +G  A++
Sbjct: 238 TEHL-LENNKLRVLDLTANRISFKGCEAIAKYL-CGEYCVLESLILTSNRTGHYGAKAIS 295

Query: 580 DA 581
            A
Sbjct: 296 QA 297



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 138/296 (46%), Gaps = 33/296 (11%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           ++ + LS  ++ + G + +++ L   + L  L L +N I   G   +AE + +  T+  L
Sbjct: 75  IQHIDLSFNEITNVGIQELSKFLSGCNTLESLNLQSNKIGVEGGELIAEGIKDIQTLTHL 134

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +LN N     GA ++ + L  NK++ EL+L  N I  +G+ A+ S L+ +   L +L++ 
Sbjct: 135 NLNFNNLQTKGAMSIVEMLFNNKTILELNLANNGIDHDGVIAITSILNWKNNSLQILNLD 194

Query: 368 N---NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           N   +SI  + A H  +   + + L  I+L  ++   +    I + L +N  +  +DL  
Sbjct: 195 NPVYHSIGQETAIHFGKMFHSNRGLEKISLQKHNFTCDAIYIITEHLLENNKLRVLDLTA 254

Query: 425 NNIHSKGASAIARVL-KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           N I  KG  AIA+ L  +  V+ SL L  N  G  GAKA+S+ L                
Sbjct: 255 NRISFKGCEAIAKYLCGEYCVLESLILTSNRTGHYGAKAISQALS--------------- 299

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
                         N T+  LD+  N + D G K +A+S +  N+ L S+ L  N 
Sbjct: 300 -------------KNRTLIHLDMVRNDIDDNGLKMIAESLE-TNDMLVSLKLYQNH 341



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 10/232 (4%)

Query: 134 AGTNLLSGF---TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQ 190
           +G N L      + K+  E  + + E  K+++  + ++++  N   +G   + E L  N+
Sbjct: 98  SGCNTLESLNLQSNKIGVEGGELIAEGIKDIQTLTHLNLNFNNLQTKGAMSIVEMLFNNK 157

Query: 191 TAEEVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSGNP----IGDEGVKCLCDILVDN 245
           T  E++ A NGI   G+ A   +L   N +L+ LNL  NP    IG E       +   N
Sbjct: 158 TILELNLANNGIDHDGVIAITSILNWKNNSLQILNLD-NPVYHSIGQETAIHFGKMFHSN 216

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-ENSTI 304
            G+E++ L   +   +    I E L  N+ LRVL+L  N I + G  ++A+ L  E   +
Sbjct: 217 RGLEKISLQKHNFTCDAIYIITEHLLENNKLRVLDLTANRISFKGCEAIAKYLCGEYCVL 276

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
            SL L  N  G  GA A+++ L  N++L  L +  N I D G++ +   L +
Sbjct: 277 ESLILTSNRTGHYGAKAISQALSKNRTLIHLDMVRNDIDDNGLKMIAESLET 328


>gi|426234291|ref|XP_004011130.1| PREDICTED: uncharacterized protein C14orf166B homolog [Ovis aries]
          Length = 492

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 149/288 (51%), Gaps = 9/288 (3%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++  L L  N I  EGI +L+  L      L  +++
Sbjct: 93  VNLNHHGLGPKGTKAIAIALVSNTTVLTLELADNCIMKEGILSLVEMLQENY-YLQEMNV 151

Query: 367 GNNSISAKGAFHVAEYIKN-CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +N +  +GA  ++E+++N   SLL + L  N+  +E AE    AL  N  I ++DL  N
Sbjct: 152 SDNDLGLEGARILSEFLQNNTSSLLSLQLAGNNFKEESAELFCQALSNNYRIKSLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               K    + ++L  N  + SLDL++N +   G  AL   L+ + ++  L L     G 
Sbjct: 212 QFCHKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + ++LR N+ ++ LDL +N + ++G   ++++ + +NE+L  + L  N I  DGA
Sbjct: 272 EGAAALGEVLRLNSYLTYLDLSSNNITNDGLSKISRALE-LNESLKVLKLFLNPISMDGA 330

Query: 546 FAIAQALKAN-----EDVAVTSLNLANNFLTKF-GQSALTDAKDLVYE 587
             +  ++K N     ED+ ++++ ++  F+    G  A+    D++Y+
Sbjct: 331 LLLILSIKRNPKSRMEDIDISNVLVSEQFVKILDGVCAIHPQLDVIYK 378



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 126/273 (46%), Gaps = 30/273 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN  + TL L+ N I  EG+  L ++L +N  +
Sbjct: 87  NMEESYVNLNHHGLGPKGTKAIAIALVSNTTVLTLELADNCIMKEGILSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S  DL  EGA+ ++E L+NN S L  L+L  N           +AL  N  I+SL
Sbjct: 147 QEMNVSDNDLGLEGARILSEFLQNNTSSLLSLQLAGNNFKEESAELFCQALSNNYRIKSL 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N         L + L  N  L+ L L  N +   G+ AL +GL S           
Sbjct: 207 DLSHNQFCHKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRS----------- 255

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
             ++S K                 ++L MN  G+EGA  + + L+ N  +T +DL  NNI
Sbjct: 256 --NVSLKK----------------LDLSMNSFGNEGAAALGEVLRLNSYLTYLDLSSNNI 297

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            + G S I+R L+ N  +  L L  NPI  DGA
Sbjct: 298 TNDGLSKISRALELNESLKVLKLFLNPISMDGA 330



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 150/299 (50%), Gaps = 5/299 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G +G   +A +L  N T   +  A N I   GI +   +LQ N  L+ +N
Sbjct: 91  SYVNLNHHGLGPKGTKAIAIALVSNTTVLTLELADNCIMKEGILSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + L + L +N + +  LQL+  + ++E A+   + L NN  ++ L+L++
Sbjct: 151 VSDNDLGLEGARILSEFLQNNTSSLLSLQLAGNNFKEESAELFCQALSNNYRIKSLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N   +     L + L  N  ++SL L+ N+    G  AL  GL  N SL++L L  NS G
Sbjct: 211 NQFCHKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+ +N+I+  G   ++  ++  +SL  + L++N I  +G
Sbjct: 271 NEGAAALGEVL-RLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDG 329

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI-TSLDLAYNPIGADGAK 461
           A  +  ++K+N      D+  +N+    +    ++L     I   LD+ Y  + A  AK
Sbjct: 330 ALLLILSIKRNPKSRMEDIDISNVLV--SEQFVKILDGVCAIHPQLDVIYKSVQALSAK 386



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 5/205 (2%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G +G + IA AL  N T+ T++L  N I  +G  +
Sbjct: 77  GVVPVSYFIRNMEES-YVNLNHHGLGPKGTKAIAIALVSNTTVLTLELADNCIMKEGILS 135

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVAD 493
           +  +L++N  +  ++++ N +G +GA+ LSE L+ +  ++ +L+L         AE    
Sbjct: 136 LVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQNNTSSLLSLQLAGNNFKEESAELFCQ 195

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L  N  I  LDL  N    +  + L Q    +N  L S+DL++N +   G  A+   L+
Sbjct: 196 ALSNNYRIKSLDLSHNQFCHKAGEYLGQML-AINVGLQSLDLSWNHLYIRGVVALCNGLR 254

Query: 554 ANEDVAVTSLNLANNFLTKFGQSAL 578
           +N  V++  L+L+ N     G +AL
Sbjct: 255 SN--VSLKKLDLSMNSFGNEGAAAL 277



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 2/228 (0%)

Query: 149 ESKQTLNEFAKE-LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + L+EF +    +  S+ ++G NF +E      ++L  N   + +  + N       
Sbjct: 159 EGARILSEFLQNNTSSLLSLQLAGNNFKEESAELFCQALSNNYRIKSLDLSHNQFCHKAG 218

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N+ L++L+LS N +   GV  LC+ L  N  +++L LS     +EGA A+ 
Sbjct: 219 EYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALG 278

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E+L+ NS L  L+L++N I   G + ++ AL  N +++ L L  N     GA  L   ++
Sbjct: 279 EVLRLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDGALLLILSIK 338

Query: 328 GNKSLRELHLH-GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            N   R   +   N +  E    ++ G+ +   +L V+     ++SAK
Sbjct: 339 RNPKSRMEDIDISNVLVSEQFVKILDGVCAIHPQLDVIYKSVQALSAK 386


>gi|428179394|gb|EKX48265.1| hypothetical protein GUITHDRAFT_136783 [Guillardia theta CCMP2712]
          Length = 502

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 158/331 (47%), Gaps = 33/331 (9%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            LNL  + I  EG + L   L    G ++RL+L    +   G   ++  L +   L  L 
Sbjct: 113 VLNLVDSHIKREGAESLSQALARCGGTIKRLELDGNYVGRMGISRLSVALTHCRNLTFLS 172

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N+I   G   L  +LL    ++ L L+ NY GA GA  LA  L     L  L L GN
Sbjct: 173 LGRNLIGDKGIGHLVSSLL-FCPLQHLDLSINYIGAEGAAKLASVLPHLSMLEVLILFGN 231

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            + DEG+   +S +  +   L  LD+  N I A+GA  +A  + +C  L  +NL  N +G
Sbjct: 232 PLKDEGVEK-ISKVLLQCFLLQRLDLSVNGIGAEGAGRLALALPSCTRLRSLNLRGNALG 290

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D G + ++ A  Q   +T +DL  N+I + GAS++ R L  + VI +LDLA N +G +GA
Sbjct: 291 DLGVKLLSWATPQCLAMTELDLSRNSITADGASSLCRKLVPD-VIVNLDLAGNFLGEEGA 349

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS------------------ 502
            AL+  LK   +++ L+L  C++G  G + +   LR+N ++S                  
Sbjct: 350 MALALSLKSCTSLSRLELSRCRLGCQGIKRLIP-LRHNQSLSHLGLGLNDIGDSGVEALL 408

Query: 503 ----------ILDLRANGLRDEGAKCLAQSF 523
                      LDL  NG+ D+GA  L   F
Sbjct: 409 PCLSDMHCLKWLDLCGNGITDQGASLLCSQF 439



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 187/393 (47%), Gaps = 11/393 (2%)

Query: 135 GTNLLSGFTGKLFRESKQTLNE-FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           G ++L+     + RE  ++L++  A+       +++ G   G  G+  L+ +L + +   
Sbjct: 110 GPSVLNLVDSHIKREGAESLSQALARCGGTIKRLELDGNYVGRMGISRLSVALTHCRNLT 169

Query: 194 EVSFAANGITAAGIKAFDGVLQSNI---ALKTLNLSGNPIGDEGVKCLCDILVDNAGVER 250
            +S   N I   GI    G L S++    L+ L+LS N IG EG   L  +L   + +E 
Sbjct: 170 FLSLGRNLIGDKGI----GHLVSSLLFCPLQHLDLSINYIGAEGAAKLASVLPHLSMLEV 225

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L    L+DEG + I+++L    +L+ L+L+ N I   G   LA AL   + +RSL+L 
Sbjct: 226 LILFGNPLKDEGVEKISKVLLQCFLLQRLDLSVNGIGAEGAGRLALALPSCTRLRSLNLR 285

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           GN  G LG   L+       ++ EL L  NSI  +G  +L   L      +  LD+  N 
Sbjct: 286 GNALGDLGVKLLSWATPQCLAMTELDLSRNSITADGASSLCRKLV--PDVIVNLDLAGNF 343

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           +  +GA  +A  +K+C SL  + L    +G +G +++   L+ N++++ + LG N+I   
Sbjct: 344 LGEEGAMALALSLKSCTSLSRLELSRCRLGCQGIKRLI-PLRHNQSLSHLGLGLNDIGDS 402

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G  A+   L D   +  LDL  N I   GA  L        ++ TL LG      +G + 
Sbjct: 403 GVEALLPCLSDMHCLKWLDLCGNGITDQGASLLCSQFTSLLSLETLNLGGNNFSLAGVDK 462

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
           +    +   ++  L + + G  DEG+  L+ + 
Sbjct: 463 LRKAAKEARSLRTLIIGSEGNWDEGSGLLSVAL 495



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 140/278 (50%), Gaps = 33/278 (11%)

Query: 278 VLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           VL L ++ I   G  SL++AL     TI+ L L+GNY G +G + L+  L   ++L  L 
Sbjct: 113 VLNLVDSHIKREGAESLSQALARCGGTIKRLELDGNYVGRMGISRLSVALTHCRNLTFLS 172

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N IGD+GI  L+S L      L  LD+  N I A+GA  +A  + +   L  + L+ 
Sbjct: 173 LGRNLIGDKGIGHLVSSLLF--CPLQHLDLSINYIGAEGAAKLASVLPHLSMLEVLILFG 230

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N + DEG EKI+  L Q   +  +DL  N I ++GA  +A  L   + + SL+L  N +G
Sbjct: 231 NPLKDEGVEKISKVLLQCFLLQRLDLSVNGIGAEGAGRLALALPSCTRLRSLNLRGNALG 290

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G K LS               W     +  + +A        ++ LDL  N +  +GA
Sbjct: 291 DLGVKLLS---------------W-----ATPQCLA--------MTELDLSRNSITADGA 322

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
             L +  K+V + + ++DLA N + ++GA A+A +LK+
Sbjct: 323 SSLCR--KLVPDVIVNLDLAGNFLGEEGAMALALSLKS 358



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 140/281 (49%), Gaps = 5/281 (1%)

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
           GG + +  +   +EG K    L+L  + I  EG  +L   L+   G +  L++  N +  
Sbjct: 93  GGIVDSLIVPAVIEGWKGPSVLNLVDSHIKREGAESLSQALARCGGTIKRLELDGNYVGR 152

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            G   ++  + +C++L +++L  N IGD+G   +  +L     +  +DL  N I ++GA+
Sbjct: 153 MGISRLSVALTHCRNLTFLSLGRNLIGDKGIGHLVSSLLFC-PLQHLDLSINYIGAEGAA 211

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            +A VL   S++  L L  NP+  +G + +S+VL     +  L L    IGA GA  +A 
Sbjct: 212 KLASVLPHLSMLEVLILFGNPLKDEGVEKISKVLLQCFLLQRLDLSVNGIGAEGAGRLAL 271

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L     +  L+LR N L D G K L+ +      A+T +DL+ N I  DGA ++ + L 
Sbjct: 272 ALPSCTRLRSLNLRGNALGDLGVKLLSWATPQC-LAMTELDLSRNSITADGASSLCRKLV 330

Query: 554 ANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVN 594
            +    + +L+LA NFL + G  AL  +      +S  E++
Sbjct: 331 PD---VIVNLDLAGNFLGEEGAMALALSLKSCTSLSRLELS 368


>gi|421897505|ref|ZP_16327873.1| lrr-gala family type III effector protein (gala 4) [Ralstonia
           solanacearum MolK2]
 gi|206588711|emb|CAQ35674.1| lrr-gala family type III effector protein (gala 4) [Ralstonia
           solanacearum MolK2]
          Length = 460

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 152/301 (50%), Gaps = 43/301 (14%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++++     GD G+   A     N+    ++ ++NGI   G++A    L +N  + TL
Sbjct: 193 LTTLNLRRNAIGDAGVAAFAR----NKKLTTLNVSSNGIGPVGVRA----LAANTTITTL 244

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++S N IGDEG +     L  N  + RL  S   +  EG +A+A     ++ L  L+L+ 
Sbjct: 245 DISNNEIGDEGARA----LASNTALTRLDASDCGIGPEGTQALA----TSTTLTSLDLSY 296

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I+  G     EAL  N+T+R+LH  GN  G   A  LA     N +L  L+L  N+IG
Sbjct: 297 NAIEAEGV----EALGRNTTLRTLHACGNELGHREAELLA----ANTTLTVLNLSSNAIG 348

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G RA  +  +     L  L++ NN I       V E+  N K L  ++L  N IGD  
Sbjct: 349 NAGARAFGANTT-----LVELNLSNNGIE-----RVPEWADNGK-LTTLDLSNNQIGDTA 397

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+ +A     + T+TT+++G N I   GA A+A     N+ +T+L+++ N IG  G  AL
Sbjct: 398 AQVLA----ASHTLTTLNVGSNRIGDTGACALA----GNTTLTTLNVSLNRIGKAGMLAL 449

Query: 464 S 464
           +
Sbjct: 450 A 450



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 48/273 (17%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L G+ +L  L+L  N+IGD G+ A      +R  KL  L++ +N I   G   +A  
Sbjct: 184 ARLLAGHPTLTTLNLRRNAIGDAGVAAF-----ARNKKLTTLNVSSNGIGPVGVRALAAN 238

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                ++  +++  N+IGDEGA     AL  N  +T +D     I  +G  A+A     +
Sbjct: 239 ----TTITTLDISNNEIGDEGAR----ALASNTALTRLDASDCGIGPEGTQALA----TS 286

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +TSLDL+YN I A+G +AL      +  + TL     ++G   AE +A     N T++
Sbjct: 287 TTLTSLDLSYNAIEAEGVEALGR----NTTLRTLHACGNELGHREAELLA----ANTTLT 338

Query: 503 ILDLRANGLRDEGAKCLAQSFKVV-----------------NEALTSIDLAFNEIRDDGA 545
           +L+L +N + + GA+    +  +V                 N  LT++DL+ N+I D   
Sbjct: 339 VLNLSSNAIGNAGARAFGANTTLVELNLSNNGIERVPEWADNGKLTTLDLSNNQIGDTA- 397

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
              AQ L A+    +T+LN+ +N +   G  AL
Sbjct: 398 ---AQVLAASH--TLTTLNVGSNRIGDTGACAL 425


>gi|326426541|gb|EGD72111.1| hypothetical protein PTSG_11549 [Salpingoeca sp. ATCC 50818]
          Length = 1203

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 131/249 (52%), Gaps = 1/249 (0%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           ++D+GA AIA+ L+       L L  N+I   G T+LA  L EN  IRSL L+ N   + 
Sbjct: 650 IQDDGATAIAQALECVDTCEHLALPENLITADGATALAALLEENMYIRSLDLSTNDIRSR 709

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G  ALA  ++    L+ L L  N+  D  +  L + L      LA L + NN +    A 
Sbjct: 710 GLEALAHAIKNGAGLKSLRLDSNNFLDVDMSPLCNALLD-NDTLAELSLSNNRLGNAAAV 768

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +   + N   L  ++L  N I D G   IA +L+ N ++T ++L GN I++ GA+A+A 
Sbjct: 769 QLGRMLANNTGLSTLDLSWNCIQDAGIRAIAQSLEANVSLTKLNLQGNGIYNAGAAALAL 828

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            +K+N+ +TSLDL++N I  +GA+ L+  LK    +  + L    I A G + V   +  
Sbjct: 829 AIKNNTTLTSLDLSHNNIRDEGAELLASALKSAPGLEHISLALNPISAKGLKAVLYAIAE 888

Query: 498 NNTISILDL 506
           N+TI  LD+
Sbjct: 889 NSTIRSLDI 897



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 137/260 (52%), Gaps = 1/260 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           +SV +  +   D+G   +A++L    T E ++   N ITA G  A   +L+ N+ +++L+
Sbjct: 641 ASVVVRAQGIQDDGATAIAQALECVDTCEHLALPENLITADGATALAALLEENMYIRSLD 700

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N I   G++ L   + + AG++ L+L S +  D     +   L +N  L  L L+NN
Sbjct: 701 LSTNDIRSRGLEALAHAIKNGAGLKSLRLDSNNFLDVDMSPLCNALLDNDTLAELSLSNN 760

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +  +    L   L  N+ + +L L+ N     G  A+A+ LE N SL +L+L GN I +
Sbjct: 761 RLGNAAAVQLGRMLANNTGLSTLDLSWNCIQDAGIRAIAQSLEANVSLTKLNLQGNGIYN 820

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G  AL   + +    L  LD+ +N+I  +GA  +A  +K+   L  I+L +N I  +G 
Sbjct: 821 AGAAALALAIKN-NTTLTSLDLSHNNIRDEGAELLASALKSAPGLEHISLALNPISAKGL 879

Query: 405 EKIADALKQNRTITTIDLGG 424
           + +  A+ +N TI ++D+GG
Sbjct: 880 KAVLYAIAENSTIRSLDIGG 899



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 1/202 (0%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +  N I+A GA  +A  ++    +  ++L  NDI   G E +A A+K    + ++ L 
Sbjct: 671 LALPENLITADGATALAALLEENMYIRSLDLSTNDIRSRGLEALAHAIKNGAGLKSLRLD 730

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            NN      S +   L DN  +  L L+ N +G   A  L  +L  +  ++TL L W  I
Sbjct: 731 SNNFLDVDMSPLCNALLDNDTLAELSLSNNRLGNAAAVQLGRMLANNTGLSTLDLSWNCI 790

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             +G   +A  L  N +++ L+L+ NG+ + GA  LA + K  N  LTS+DL+ N IRD+
Sbjct: 791 QDAGIRAIAQSLEANVSLTKLNLQGNGIYNAGAAALALAIKN-NTTLTSLDLSHNNIRDE 849

Query: 544 GAFAIAQALKANEDVAVTSLNL 565
           GA  +A ALK+   +   SL L
Sbjct: 850 GAELLASALKSAPGLEHISLAL 871


>gi|355756770|gb|EHH60378.1| hypothetical protein EGM_11726 [Macaca fascicularis]
          Length = 1044

 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 124/244 (50%), Gaps = 5/244 (2%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L   +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 779  GPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 834

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 835  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGARV 894

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+DN+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 895  LAEGLRDNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 954

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            L  N  +  L L  N L+DEG  CLA+  K  N +L  + L+ N I   GA A+ QAL+ 
Sbjct: 955  LAKNVMLEELCLEENHLQDEGVCCLAEGLK-RNSSLKILKLSNNCITYLGAEALLQALER 1013

Query: 555  NEDV 558
            N+ +
Sbjct: 1014 NDTI 1017



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 136/269 (50%), Gaps = 4/269 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 768  VGHLKLTFCSVGPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 824

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 825  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 883

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE +++  SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 884  NNHITAAGARVLAEGLRDNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 943

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G   L+E LK + ++  LKL    I   G
Sbjct: 944  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNNCITYLG 1003

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGA 516
            AE +   L  N+TI  + LR N    E A
Sbjct: 1004 AEALLQALERNDTILEVWLRGNTFSLEEA 1032



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 1/207 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL        L 
Sbjct: 822  KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALR 881

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G   LAE L +N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 882  LGNNHITAAGARVLAEGLRDNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 941

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +IG  G +AL   L ++   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 942  NIGSVGAQALALML-AKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNNCIT 1000

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNI 427
              GAE +  AL++N TI  + L GN  
Sbjct: 1001 YLGAEALLQALERNDTILEVWLRGNTF 1027



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 85/164 (51%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 867  MAKLLACRQNFLALRLGNNHITAAGARVLAEGLRDNASLQFLGFWGNRVGDEGAQALAEA 926

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G   LAE L  N
Sbjct: 927  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRN 986

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E
Sbjct: 987  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLE 1030



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 126/278 (45%), Gaps = 8/278 (2%)

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
            G N    +++F + G       AF  VL+       L L  N +GD GV+ L   L    
Sbjct: 765  GLNVGHLKLTFCSVGPAECAALAF--VLRHLRQPVALQLDYNSVGDIGVEQLLPCL---- 818

Query: 247  GVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
            GV + L L   ++ D G   + E   +   L+ L L NN +      S+A+ L       
Sbjct: 819  GVCKALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFL 878

Query: 306  SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            +L L  N+  A GA  LA+GL  N SL+ L   GN +GDEG +AL   L   +  L  L 
Sbjct: 879  ALRLGNNHITAAGARVLAEGLRDNASLQFLGFWGNRVGDEGAQALAEALGDHQS-LRWLS 937

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +  N+I + GA  +A  +     L  + L  N + DEG   +A+ LK+N ++  + L  N
Sbjct: 938  LVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNN 997

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             I   GA A+ + L+ N  I  + L  N    + A  L
Sbjct: 998  CITYLGAEALLQALERNDTILEVWLRGNTFSLEEADKL 1035



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 87/174 (50%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F ++ +   +    G   LAE L  N + + + F 
Sbjct: 852  LALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGARVLAEGLRDNASLQFLGFW 911

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A    L  + +L+ L+L GN IG  G + L  +L  N  +E L L    L
Sbjct: 912  GNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHL 971

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            +DEG   +AE LK NS L++L+L+NN I Y G  +L +AL  N TI  + L GN
Sbjct: 972  QDEGVCCLAEGLKRNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGN 1025



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 103/235 (43%), Gaps = 29/235 (12%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 830  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 889

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L DNA ++ L      + DEGA+A+AE                        
Sbjct: 890  AGARVLAEGLRDNASLQFLGFWGNRVGDEGAQALAE------------------------ 925

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
                AL ++ ++R L L GN  G++GA ALA  L  N  L EL L  N + DEG+  L  
Sbjct: 926  ----ALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAE 981

Query: 353  GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            GL  R   L +L + NN I+  GA  + + ++   ++L + L  N    E A+K+
Sbjct: 982  GL-KRNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEADKL 1035


>gi|290990760|ref|XP_002678004.1| predicted protein [Naegleria gruberi]
 gi|284091614|gb|EFC45260.1| predicted protein [Naegleria gruberi]
          Length = 561

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 115/208 (55%), Gaps = 2/208 (0%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +  S+ +   N GDE L  LA  L  NQT   +  + N I+  GI      L  NI LK 
Sbjct: 320 SLKSLSIVNCNVGDEHLKLLAHGLADNQTITSLDMSFNLISDFGICDLIDGLFINITLKR 379

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L LS N IG+ G   L D+L+ N  ++RL +S   +  +GAK+I++ L +NS+L+ L+L 
Sbjct: 380 LTLSHNNIGNVGCVYLSDLLLGNVSLKRLDISYNRVGSDGAKSISKALCSNSLLKRLDLG 439

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK-GLEGNKSLRELHLHGNS 341
           +N I   G ++LAE L  N T+ +L L+ N  G+ G   L   G+  N+ L++L LHGN 
Sbjct: 440 HNNIGDEGCSALAEGLKANKTLATLDLSFNAIGSEGLIRLCNDGILYNRGLKDLSLHGNP 499

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             + G ++L+  L   K  L  +DIGNN
Sbjct: 500 FDNAGAKSLVKALIDHK-TLKRVDIGNN 526



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 127/238 (53%), Gaps = 3/238 (1%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +  S ++LK+L++    +GDE +K L   L DN  +  L +S   + D G   + + L  
Sbjct: 314 IQSSRVSLKSLSIVNCNVGDEHLKLLAHGLADNQTITSLDMSFNLISDFGICDLIDGLFI 373

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N  L+ L L++N I   G   L++ LL N +++ L ++ N  G+ GA +++K L  N  L
Sbjct: 374 NITLKRLTLSHNNIGNVGCVYLSDLLLGNVSLKRLDISYNRVGSDGAKSISKALCSNSLL 433

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLW 391
           + L L  N+IGDEG  AL  GL + K  LA LD+  N+I ++G   +  + I   + L  
Sbjct: 434 KRLDLGHNNIGDEGCSALAEGLKANK-TLATLDLSFNAIGSEGLIRLCNDGILYNRGLKD 492

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN-NIHSKGASAIARVLKDNSVITSL 448
           ++L+ N   + GA+ +  AL  ++T+  +D+G N  I   G   IA+ L    +I +L
Sbjct: 493 LSLHGNPFDNAGAKSLVKALIDHKTLKRVDIGNNEKIGVDGIGTIAQTLTTKYMIGNL 550



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 111/217 (51%), Gaps = 8/217 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +  +S+DMS     D G+  L + L  N T + ++ + N I   G      +L  N++LK
Sbjct: 347 QTITSLDMSFNLISDFGICDLIDGLFINITLKRLTLSHNNIGNVGCVYLSDLLLGNVSLK 406

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L++S N +G +G K +   L  N+ ++RL L   ++ DEG  A+AE LK N  L  L+L
Sbjct: 407 RLDISYNRVGSDGAKSISKALCSNSLLKRLDLGHNNIGDEGCSALAEGLKANKTLATLDL 466

Query: 282 NNNMIDYSGFTSLA-EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           + N I   G   L  + +L N  ++ L L+GN     GA +L K L  +K+L+ + +  N
Sbjct: 467 SFNAIGSEGLIRLCNDGILYNRGLKDLSLHGNPFDNAGAKSLVKALIDHKTLKRVDIGNN 526

Query: 341 S-IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
             IG +GI  +   L+++        IGN  +  KGA
Sbjct: 527 EKIGVDGIGTIAQTLTTK------YMIGNLVMRRKGA 557



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 139/311 (44%), Gaps = 42/311 (13%)

Query: 208 KAFDGVLQSNIALKTLNLSG-NPIGDEGVKCLCDILVDNAGVERLQLSSVDLR--DEGAK 264
           K  D   +SNI  + L L G +P     +K L    + ++ V    LS V+    DE  K
Sbjct: 280 KENDAKRESNI--EKLVLEGEDPFTISDLKALTTTCIQSSRVSLKSLSIVNCNVGDEHLK 337

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            +A  L +N  +  L+++ N+I   G   L + L  N T++ L L+ N  G +G   L+ 
Sbjct: 338 LLAHGLADNQTITSLDMSFNLISDFGICDLIDGLFINITLKRLTLSHNNIGNVGCVYLSD 397

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L GN SL+ L +  N +G +G +++   L S    L  LD+G+N               
Sbjct: 398 LLLGNVSLKRLDISYNRVGSDGAKSISKALCSN-SLLKRLDLGHN--------------- 441

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD--- 441
                        +IGDEG   +A+ LK N+T+ T+DL  N I S+G   + R+  D   
Sbjct: 442 -------------NIGDEGCSALAEGLKANKTLATLDLSFNAIGSEG---LIRLCNDGIL 485

Query: 442 -NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ-IGASGAEFVADMLRYNN 499
            N  +  L L  NP    GAK+L + L  H  +  + +G  + IG  G   +A  L    
Sbjct: 486 YNRGLKDLSLHGNPFDNAGAKSLVKALIDHKTLKRVDIGNNEKIGVDGIGTIAQTLTTKY 545

Query: 500 TISILDLRANG 510
            I  L +R  G
Sbjct: 546 MIGNLVMRRKG 556



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 29/222 (13%)

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           SL+ L +   ++GDE ++ L  GL+            N +I++                 
Sbjct: 320 SLKSLSIVNCNVGDEHLKLLAHGLAD-----------NQTITS----------------- 351

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +++  N I D G   + D L  N T+  + L  NNI + G   ++ +L  N  +  LD+
Sbjct: 352 -LDMSFNLISDFGICDLIDGLFINITLKRLTLSHNNIGNVGCVYLSDLLLGNVSLKRLDI 410

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           +YN +G+DGAK++S+ L  +  +  L LG   IG  G   +A+ L+ N T++ LDL  N 
Sbjct: 411 SYNRVGSDGAKSISKALCSNSLLKRLDLGHNNIGDEGCSALAEGLKANKTLATLDLSFNA 470

Query: 511 LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
           +  EG   L     + N  L  + L  N   + GA ++ +AL
Sbjct: 471 IGSEGLIRLCNDGILYNRGLKDLSLHGNPFDNAGAKSLVKAL 512



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           N+  +    +A  L DN  ITSLD+++N I   G   L + L  +  +  L L    IG 
Sbjct: 330 NVGDEHLKLLAHGLADNQTITSLDMSFNLISDFGICDLIDGLFINITLKRLTLSHNNIGN 389

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            G  +++D+L  N ++  LD+  N +  +GAK ++++    N  L  +DL  N I D+G 
Sbjct: 390 VGCVYLSDLLLGNVSLKRLDISYNRVGSDGAKSISKAL-CSNSLLKRLDLGHNNIGDEGC 448

Query: 546 FAIAQALKANEDVAVTSLNL 565
            A+A+ LKAN+ +A   L+ 
Sbjct: 449 SALAEGLKANKTLATLDLSF 468


>gi|224045451|ref|XP_002196320.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Taeniopygia guttata]
          Length = 951

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 119/230 (51%), Gaps = 5/230 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N+I D GI+ L    S    KLAV+ +  N I+  G   + E +   + + ++ L
Sbjct: 706 LDLDNNNINDYGIKQLQPCFS----KLAVIRLSVNQITDHGVRILYEELSKYQIVSFLGL 761

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           Y N I D GA+ +A  +++  ++  + +G N I S+G   +A+ ++ +  +  + +  N 
Sbjct: 762 YNNQITDVGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNQ 821

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G +GAKA +E L+ H  +  + L +  I   G + +A+ +++NN++ I  L  N L DE
Sbjct: 822 VGDEGAKAFAEALRNHPKLTNVSLAFNGITTEGGKSIAEAMQHNNSVRIFWLTKNELDDE 881

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            A   A+  K VN+ L  + L  N+I   G   ++ AL+ N  +    LN
Sbjct: 882 AAMSFAEMLK-VNKKLVHLWLIQNKITAKGVKCLSDALQENTTIKEICLN 930



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 116/214 (54%), Gaps = 2/214 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L  N I D G+R L   LS  +  ++ L + NN I+  GA +VA+ I+ C SL ++ +
Sbjct: 731 IRLSVNQITDHGVRILYEELSKYQ-IVSFLGLYNNQITDVGAKYVAKLIEECSSLEYVKI 789

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+++++T+  I + GN +  +GA A A  L+++  +T++ LA+N 
Sbjct: 790 GANKITSEGGKCLAQAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRNHPKLTNVSLAFNG 849

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           I  +G K+++E ++ + ++    L   ++    A   A+ML+ N  +  L L  N +  +
Sbjct: 850 ITTEGGKSIAEAMQHNNSVRIFWLTKNELDDEAAMSFAEMLKVNKKLVHLWLIQNKITAK 909

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           G KCL+ + +  N  +  I L  N I  + A A 
Sbjct: 910 GVKCLSDALQ-ENTTIKEICLNGNLISQEEAKAF 942



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 130/262 (49%), Gaps = 4/262 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AI+ +L +      L+L+NN I+  G   L     + + IR   L+ N     G   L +
Sbjct: 692 AISFVLHHFQKRLALDLDNNNINDYGIKQLQPCFSKLAVIR---LSVNQITDHGVRILYE 748

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L   + +  L L+ N I D G +  ++ L      L  + IG N I+++G   +A+ I+
Sbjct: 749 ELSKYQIVSFLGLYNNQITDVGAK-YVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQ 807

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             K++  I ++ N +GDEGA+  A+AL+ +  +T + L  N I ++G  +IA  ++ N+ 
Sbjct: 808 KSKTMFEIGMWGNQVGDEGAKAFAEALRNHPKLTNVSLAFNGITTEGGKSIAEAMQHNNS 867

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +    L  N +  + A + +E+LK +  +  L L   +I A G + ++D L+ N TI  +
Sbjct: 868 VRIFWLTKNELDDEAAMSFAEMLKVNKKLVHLWLIQNKITAKGVKCLSDALQENTTIKEI 927

Query: 505 DLRANGLRDEGAKCLAQSFKVV 526
            L  N +  E AK      +++
Sbjct: 928 CLNGNLISQEEAKAFENEERII 949



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 4/236 (1%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N I   GIK           L  + LS N I D GV+ L + L     V  L L +  + 
Sbjct: 711 NNINDYGIKQLQPCFSK---LAVIRLSVNQITDHGVRILYEELSKYQIVSFLGLYNNQIT 767

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GAK +A+L++  S L  +++  N I   G   LA+A+ ++ T+  + + GN  G  GA
Sbjct: 768 DVGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNQVGDEGA 827

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A A+ L  +  L  + L  N I  EG +++   +      + +  +  N +  + A   
Sbjct: 828 KAFAEALRNHPKLTNVSLAFNGITTEGGKSIAEAM-QHNNSVRIFWLTKNELDDEAAMSF 886

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           AE +K  K L+ + L  N I  +G + ++DAL++N TI  I L GN I  + A A 
Sbjct: 887 AEMLKVNKKLVHLWLIQNKITAKGVKCLSDALQENTTIKEICLNGNLISQEEAKAF 942



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 3/195 (1%)

Query: 159 KELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           +EL  +  V   G       D G  ++A+ +    + E V   AN IT+ G K     +Q
Sbjct: 748 EELSKYQIVSFLGLYNNQITDVGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQ 807

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            +  +  + + GN +GDEG K   + L ++  +  + L+   +  EG K+IAE +++N+ 
Sbjct: 808 KSKTMFEIGMWGNQVGDEGAKAFAEALRNHPKLTNVSLAFNGITTEGGKSIAEAMQHNNS 867

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           +R+  L  N +D     S AE L  N  +  L L  N   A G   L+  L+ N +++E+
Sbjct: 868 VRIFWLTKNELDDEAAMSFAEMLKVNKKLVHLWLIQNKITAKGVKCLSDALQENTTIKEI 927

Query: 336 HLHGNSIGDEGIRAL 350
            L+GN I  E  +A 
Sbjct: 928 CLNGNLISQEEAKAF 942



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 87/189 (46%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   Q    +    N IT  G K    +++   +L+ + + 
Sbjct: 731 IRLSVNQITDHGVRILYEELSKYQIVSFLGLYNNQITDVGAKYVAKLIEECSSLEYVKIG 790

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG KCL   +  +  +  + +    + DEGAKA AE L+N+  L  + L  N I
Sbjct: 791 ANKITSEGGKCLAQAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRNHPKLTNVSLAFNGI 850

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  S+AEA+  N+++R   L  N      A + A+ L+ NK L  L L  N I  +G
Sbjct: 851 TTEGGKSIAEAMQHNNSVRIFWLTKNELDDEAAMSFAEMLKVNKKLVHLWLIQNKITAKG 910

Query: 347 IRALMSGLS 355
           ++ L   L 
Sbjct: 911 VKCLSDALQ 919



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L +  ++ +    + M G   GDEG    AE+L  +     VS A NGIT 
Sbjct: 793 KITSEGGKCLAQAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRNHPKLTNVSLAFNGITT 852

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    +Q N +++   L+ N                            +L DE A 
Sbjct: 853 EGGKSIAEAMQHNNSVRIFWLTKN----------------------------ELDDEAAM 884

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           + AE+LK N  L  L L  N I   G   L++AL EN+TI+ + LNGN
Sbjct: 885 SFAEMLKVNKKLVHLWLIQNKITAKGVKCLSDALQENTTIKEICLNGN 932



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 28/203 (13%)

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK----------DN----------- 442
           +EK+     +      I L   N  S   SAI+ VL           DN           
Sbjct: 662 SEKVGRMAARRMHANYIKLAYCNACSADCSAISFVLHHFQKRLALDLDNNNINDYGIKQL 721

Query: 443 ----SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
               S +  + L+ N I   G + L E L  +  ++ L L   QI   GA++VA ++   
Sbjct: 722 QPCFSKLAVIRLSVNQITDHGVRILYEELSKYQIVSFLGLYNNQITDVGAKYVAKLIEEC 781

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           +++  + + AN +  EG KCLAQ+ +  ++ +  I +  N++ D+GA A A+AL+ +   
Sbjct: 782 SSLEYVKIGANKITSEGGKCLAQAIQ-KSKTMFEIGMWGNQVGDEGAKAFAEALRNHP-- 838

Query: 559 AVTSLNLANNFLTKFGQSALTDA 581
            +T+++LA N +T  G  ++ +A
Sbjct: 839 KLTNVSLAFNGITTEGGKSIAEA 861


>gi|326926192|ref|XP_003209288.1| PREDICTED: leucine-rich repeat-containing protein 34-like
           [Meleagris gallopavo]
          Length = 418

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 154/345 (44%), Gaps = 43/345 (12%)

Query: 222 TLNLSGN-------PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           TL ++GN        + DE V+ L  +L     V  L L   DL D G + +A  L+ NS
Sbjct: 46  TLKIAGNNRLVPVQRVTDEDVQVLASVLCSAVFVTGLDLRYNDLTDVGVRHVATFLQENS 105

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            LR L L  N I  SG   +A AL  N T+  L + GN  G  G    A  L+ N +L +
Sbjct: 106 TLRYLNLMFNDIGTSGAELIANALHSNETLLHLRMTGNKIGNKGGMYFASMLQVNCTLEK 165

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN-----SISAKGAFHVAEYIKNCKSL 389
           L L    +G + + A+ S L+  K   AV  I  N     S   +   H+A  +KN  SL
Sbjct: 166 LDLGDCDMGTQCLIAIASVLTQNK---AVRAINLNRPLLYSQEEETTIHMALMLKNNSSL 222

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           + ++L  ++I   G E++ +AL +N ++  +DL  N I  +    +  +LK N  +  LD
Sbjct: 223 VELHLCKHEIKSLGVERLCEALYENCSLRYLDLSCNKITREDVKFLGELLKQNQTLEILD 282

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L  N I  DGA  LSE L                             YN T+  L + +N
Sbjct: 283 LNSNRIEDDGAIYLSEALAL---------------------------YNRTLKALSVVSN 315

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            +  +G   L+Q+ K +N  L+ I +  N   +    A ++ ++A
Sbjct: 316 NISGKGLAALSQAMK-INVELSYIYIWGNNFDEAACTAFSELIQA 359



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 133/279 (47%), Gaps = 34/279 (12%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + DE ++ L S L S    +  LD+  N ++  G  HVA +++   +L ++NL  NDIG 
Sbjct: 61  VTDEDVQVLASVLCSAVF-VTGLDLRYNDLTDVGVRHVATFLQENSTLRYLNLMFNDIGT 119

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GAE IA+AL  N T+  + + GN I +KG    A +L+ N  +  LDL    +G     
Sbjct: 120 SGAELIANALHSNETLLHLRMTGNKIGNKGGMYFASMLQVNCTLEKLDLGDCDMGTQCLI 179

Query: 462 ALSEVLK-----------------------------FHGNINTLKLGWC--QIGASGAEF 490
           A++ VL                                 N + ++L  C  +I + G E 
Sbjct: 180 AIASVLTQNKAVRAINLNRPLLYSQEEETTIHMALMLKNNSSLVELHLCKHEIKSLGVER 239

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           + + L  N ++  LDL  N +  E  K L +  K  N+ L  +DL  N I DDGA  +++
Sbjct: 240 LCEALYENCSLRYLDLSCNKITREDVKFLGELLK-QNQTLEILDLNSNRIEDDGAIYLSE 298

Query: 551 ALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMS 589
           AL A  +  + +L++ +N ++  G +AL+ A  +  E+S
Sbjct: 299 AL-ALYNRTLKALSVVSNNISGKGLAALSQAMKINVELS 336



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 139/284 (48%), Gaps = 13/284 (4%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + +D+   +  D G+  +A  L  N T   ++   N I  +G +     L SN  L  L 
Sbjct: 80  TGLDLRYNDLTDVGVRHVATFLQENSTLRYLNLMFNDIGTSGAELIANALHSNETLLHLR 139

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           ++GN IG++G      +L  N  +E+L L   D+  +   AIA +L  N  +R + LN  
Sbjct: 140 MTGNKIGNKGGMYFASMLQVNCTLEKLDLGDCDMGTQCLIAIASVLTQNKAVRAINLNRP 199

Query: 285 MIDYSG--FTSLAEALL--ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           ++ YS    T++  AL+   NS++  LHL  +   +LG   L + L  N SLR L L  N
Sbjct: 200 LL-YSQEEETTIHMALMLKNNSSLVELHLCKHEIKSLGVERLCEALYENCSLRYLDLSCN 258

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE----YIKNCKSLLWINLYM 396
            I  E ++  +  L  +   L +LD+ +N I   GA +++E    Y +  K+L  ++   
Sbjct: 259 KITREDVK-FLGELLKQNQTLEILDLNSNRIEDDGAIYLSEALALYNRTLKALSVVS--- 314

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           N+I  +G   ++ A+K N  ++ I + GNN      +A + +++
Sbjct: 315 NNISGKGLAALSQAMKINVELSYIYIWGNNFDEAACTAFSELIQ 358



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 3/262 (1%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F +E      +++   + G  G   +A +L  N+T   +    N I   G   F  +LQ 
Sbjct: 100 FLQENSTLRYLNLMFNDIGTSGAELIANALHSNETLLHLRMTGNKIGNKGGMYFASMLQV 159

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKNN 273
           N  L+ L+L    +G + +  +  +L  N  V  + L+   L    +E    +A +LKNN
Sbjct: 160 NCTLEKLDLGDCDMGTQCLIAIASVLTQNKAVRAINLNRPLLYSQEEETTIHMALMLKNN 219

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           S L  L L  + I   G   L EAL EN ++R L L+ N         L + L+ N++L 
Sbjct: 220 SSLVELHLCKHEIKSLGVERLCEALYENCSLRYLDLSCNKITREDVKFLGELLKQNQTLE 279

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L+ N I D+G   L   L+     L  L + +N+IS KG   +++ +K    L +I 
Sbjct: 280 ILDLNSNRIEDDGAIYLSEALALYNRTLKALSVVSNNISGKGLAALSQAMKINVELSYIY 339

Query: 394 LYMNDIGDEGAEKIADALKQNR 415
           ++ N+  +      ++ ++  R
Sbjct: 340 IWGNNFDEAACTAFSELIQAGR 361


>gi|300704109|ref|YP_003745711.1| leucine-rich-repeat type III effector protein (gala5) [Ralstonia
           solanacearum CFBP2957]
 gi|299071772|emb|CBJ43096.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
           solanacearum CFBP2957]
          Length = 535

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 166/359 (46%), Gaps = 80/359 (22%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRVLE 280
           TLN S N +G EGV+ L         V    L+S+DL D G   A A+ L ++  L  L 
Sbjct: 218 TLNASHNGVGSEGVQAL---------VGCKTLTSLDLSDNGLGDAEAQRLGSSERLTTLN 268

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           +N N ID  G                                A+ L   K+L  L + GN
Sbjct: 269 VNRNRIDVQG--------------------------------ARALAACKTLTSLDIGGN 296

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           SIGD G+ AL++       +L  L++    I A    H  + + +CK+L  + +  N+IG
Sbjct: 297 SIGDAGVNALVA-----NAQLTTLNVERAEIGA----HGVQALADCKTLTSLRIDNNNIG 347

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           DEGA  +A     + ++TT+    N I   GA A+A     N+ +T+L+L +N IG  GA
Sbjct: 348 DEGANTLA----ASTSLTTLHSESNGIGPTGAQALA----ANTRLTTLNLGHNSIGDAGA 399

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASG-AEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           +A          +    L W  +  +G ++  A  L  + T++ LD   N ++D GA+ L
Sbjct: 400 QAW---------LANTTLVWLSVRRNGLSDACAIRLAASKTLTTLDASDNAIKDAGARAL 450

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           A      N  LT+++++ NEI + GA A+A       +  + SL+L NN + + G  AL
Sbjct: 451 A-----ANRTLTALNVSSNEIGNAGARALA------ANTMLKSLDLRNNRMLEAGVRAL 498



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 90/194 (46%), Gaps = 26/194 (13%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           + +  +S+ +   N GDEG   LA S        E    +NGI   G +A    L +N  
Sbjct: 332 DCKTLTSLRIDNNNIGDEGANTLAASTSLTTLHSE----SNGIGPTGAQA----LAANTR 383

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRV 278
           L TLNL  N IGD G +         A +    L  + +R  G + A A  L  +  L  
Sbjct: 384 LTTLNLGHNSIGDAGAQ---------AWLANTTLVWLSVRRNGLSDACAIRLAASKTLTT 434

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+ ++N I  +G    A AL  N T+ +L+++ N  G  GA ALA     N  L+ L L 
Sbjct: 435 LDASDNAIKDAG----ARALAANRTLTALNVSSNEIGNAGARALA----ANTMLKSLDLR 486

Query: 339 GNSIGDEGIRALMS 352
            N + + G+RAL++
Sbjct: 487 NNRMLEAGVRALLA 500


>gi|428170884|gb|EKX39805.1| hypothetical protein GUITHDRAFT_76089 [Guillardia theta CCMP2712]
          Length = 350

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 151/317 (47%), Gaps = 11/317 (3%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA-FDG 212
           LN     L     +D+S    GDEG   + E L  N+T + +    + I   G +A FD 
Sbjct: 37  LNGLNNRLCQLDKLDLSCNKIGDEGGTLIGEFLASNRTLKTLVLQGSSIGPPGQRAIFDA 96

Query: 213 VLQSNIALKTLNLSG-----NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +   N +L +L+L       N  GDEG   L + L  N  + RL LS+  L      +++
Sbjct: 97  LKGKNTSLSSLDLGCCGAGKNVCGDEGCLALAEALRRNTSLARLSLSANRLSPGMMSSLS 156

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
             L  N  L  L+L++NMI   G TSLA++L             +   + GA  +A  +E
Sbjct: 157 RGLGRNLYLTQLDLSDNMIHDEGATSLAQSLSLLHLSELSLCRNSIASS-GAEKIAYAIE 215

Query: 328 -GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
            G   +  L L GN++G  G RA    LS +   L  L + + S+  +    +  Y +  
Sbjct: 216 LGKPGITTLDLSGNAVGYGGCRAFADILSYKNTVLTALKLRSCSLHLQEVEGILRYPR-- 273

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
            SL   +L  N+IGD+G   ++  L  NR+I  +DL  N+I   GASA++ VLK N  +T
Sbjct: 274 -SLTMTDLSKNEIGDKGLLHLSRVLASNRSIQHVDLSFNSIGDAGASALSSVLKTNESLT 332

Query: 447 SLDLAYNPIGADGAKAL 463
            LD+++N +   G  +L
Sbjct: 333 ELDVSWNNLREAGLHSL 349



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 151/307 (49%), Gaps = 40/307 (13%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L+ N  G  G   + + L  N++L+ L L G+SIG  G RA+   L  +   L+ LD+
Sbjct: 50  LDLSCNKIGDEGGTLIGEFLASNRTLKTLVLQGSSIGPPGQRAIFDALKGKNTSLSSLDL 109

Query: 367 G-----NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
           G      N    +G   +AE ++   SL  ++L  N +       ++  L +N  +T +D
Sbjct: 110 GCCGAGKNVCGDEGCLALAEALRRNTSLARLSLSANRLSPGMMSSLSRGLGRNLYLTQLD 169

Query: 422 LGGNNIHSKGASAIARVLKD----------NSV------------------ITSLDLAYN 453
           L  N IH +GA+++A+ L            NS+                  IT+LDL+ N
Sbjct: 170 LSDNMIHDEGATSLAQSLSLLHLSELSLCRNSIASSGAEKIAYAIELGKPGITTLDLSGN 229

Query: 454 PIGADGAKALSEVLKFHGNINT-LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
            +G  G +A +++L +   + T LKL  C +     + V  +LRY  ++++ DL  N + 
Sbjct: 230 AVGYGGCRAFADILSYKNTVLTALKLRSCSLHL---QEVEGILRYPRSLTMTDLSKNEIG 286

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           D+G   L++     N ++  +DL+FN I D GA A++  LK NE  ++T L+++ N L +
Sbjct: 287 DKGLLHLSRVL-ASNRSIQHVDLSFNSIGDAGASALSSVLKTNE--SLTELDVSWNNLRE 343

Query: 573 FGQSALT 579
            G  +L 
Sbjct: 344 AGLHSLC 350



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 151/309 (48%), Gaps = 13/309 (4%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRV 278
           L  L+LS N IGDEG   + + L  N  ++ L L    +   G +AI + LK  N+ L  
Sbjct: 47  LDKLDLSCNKIGDEGGTLIGEFLASNRTLKTLVLQGSSIGPPGQRAIFDALKGKNTSLSS 106

Query: 279 LELN-----NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           L+L       N+    G  +LAEAL  N+++  L L+ N       ++L++GL  N  L 
Sbjct: 107 LDLGCCGAGKNVCGDEGCLALAEALRRNTSLARLSLSANRLSPGMMSSLSRGLGRNLYLT 166

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWI 392
           +L L  N I DEG  A     S     L+ L +  NSI++ GA  +A  I+  K  +  +
Sbjct: 167 QLDLSDNMIHDEG--ATSLAQSLSLLHLSELSLCRNSIASSGAEKIAYAIELGKPGITTL 224

Query: 393 NLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +L  N +G  G    AD L  +N  +T + L   ++H +    I R  +    +T  DL+
Sbjct: 225 DLSGNAVGYGGCRAFADILSYKNTVLTALKLRSCSLHLQEVEGILRYPRS---LTMTDLS 281

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  G   LS VL  + +I  + L +  IG +GA  ++ +L+ N +++ LD+  N L
Sbjct: 282 KNEIGDKGLLHLSRVLASNRSIQHVDLSFNSIGDAGASALSSVLKTNESLTELDVSWNNL 341

Query: 512 RDEGAKCLA 520
           R+ G   L 
Sbjct: 342 REAGLHSLC 350



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 43/78 (55%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+ +  D+S    GD+GL  L+  L  N++ + V  + N I  AG  A   VL++N +L 
Sbjct: 273 RSLTMTDLSKNEIGDKGLLHLSRVLASNRSIQHVDLSFNSIGDAGASALSSVLKTNESLT 332

Query: 222 TLNLSGNPIGDEGVKCLC 239
            L++S N + + G+  LC
Sbjct: 333 ELDVSWNNLREAGLHSLC 350


>gi|145529968|ref|XP_001450767.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418389|emb|CAK83370.1| unnamed protein product [Paramecium tetraurelia]
          Length = 763

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 161/348 (46%), Gaps = 16/348 (4%)

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N +G E  K + DIL+ N     L+L+   + DEG   + E+LK N  +  L+ ++N I 
Sbjct: 183 NQLGLESAKTVRDILLYNNHFSTLRLARNAIGDEGLVELLEMLKVNKNIVHLDFSSNNIT 242

Query: 288 YSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             G   L   L+   +I S+ L      N N     G   +   L+ N  L+ L L G S
Sbjct: 243 ADGAFYLFNELIPLHSIISIELSSKDGLNRNKVSVKGCEPIETILKYNHPLQFLGLRGTS 302

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G   ++SGL +    LA L++ NN ++ +   ++ +YI NC +L+ ++L  N +G+
Sbjct: 303 IQNAGFECILSGLQT-NNTLAYLNVSNNDLNEEACNYMVQYISNC-NLVELDLSYNPLGN 360

Query: 402 EGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G + ++    K +  +  ++L G  I S G     + L  N  +  L L  N    +G 
Sbjct: 361 NGMDYLSRIFDKGSFMLRKLNLAGCEIKSLGILKFFQSLAVNRFLERLILDENHFSGNGF 420

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
             +  VL     +  L +  C I A+GA+F+ + +  N T+  L LR N L D GA+C+ 
Sbjct: 421 NEIENVLTSRIPLTYLSMAKCSINATGADFIGNGVERNRTLKTLILRDNRLTDAGAECVF 480

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           +           +DL    + D     +   +K  +   +T+L L +N
Sbjct: 481 KGL-----FFEKLDLKRCNLTDKCVLGLCSMIK--QSTQLTTLLLPDN 521



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 156/379 (41%), Gaps = 61/379 (16%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA---- 204
           ES +T+ +       FS++ ++    GDEGL  L E L  N+    + F++N ITA    
Sbjct: 188 ESAKTVRDILLYNNHFSTLRLARNAIGDEGLVELLEMLKVNKNIVHLDFSSNNITADGAF 247

Query: 205 ------------------------------AGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
                                          G +  + +L+ N  L+ L L G  I + G
Sbjct: 248 YLFNELIPLHSIISIELSSKDGLNRNKVSVKGCEPIETILKYNHPLQFLGLRGTSIQNAG 307

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            +C+   L  N  +  L +S+ DL +E    + + + N +++  L+L+ N +  +G   L
Sbjct: 308 FECILSGLQTNNTLAYLNVSNNDLNEEACNYMVQYISNCNLVE-LDLSYNPLGNNGMDYL 366

Query: 295 AEALLENS-TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +    + S  +R L+L G    +LG     + L  N+ L  L L  N     G   + + 
Sbjct: 367 SRIFDKGSFMLRKLNLAGCEIKSLGILKFFQSLAVNRFLERLILDENHFSGNGFNEIENV 426

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI------ 407
           L+SR   L  L +   SI+A GA  +   ++  ++L  + L  N + D GAE +      
Sbjct: 427 LTSR-IPLTYLSMAKCSINATGADFIGNGVERNRTLKTLILRDNRLTDAGAECVFKGLFF 485

Query: 408 ------------------ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
                                +KQ+  +TT+ L  N  H      I   ++ NS I +LD
Sbjct: 486 EKLDLKRCNLTDKCVLGLCSMIKQSTQLTTLLLPDNGFHDSSGIVICEAIRVNSSILNLD 545

Query: 450 LAYNPIGADGAKALSEVLK 468
           +  NP+       +++V++
Sbjct: 546 ICENPLSYKYIDQINKVIE 564



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 112/288 (38%), Gaps = 35/288 (12%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL-QSNIALK 221
             + +++S  +  +E   ++ + +  N    E+  + N +   G+     +  + +  L+
Sbjct: 320 TLAYLNVSNNDLNEEACNYMVQYIS-NCNLVELDLSYNPLGNNGMDYLSRIFDKGSFMLR 378

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL+G  I   G+      L  N  +ERL L      DE                    
Sbjct: 379 KLNLAGCEIKSLGILKFFQSLAVNRFLERLIL------DE-------------------- 412

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N    +GF  +   L     +  L +      A GA+ +  G+E N++L+ L L  N 
Sbjct: 413 --NHFSGNGFNEIENVLTSRIPLTYLSMAKCSINATGADFIGNGVERNRTLKTLILRDNR 470

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D G   +  GL   K     LD+   +++ K    +   IK    L  + L  N   D
Sbjct: 471 LTDAGAECVFKGLFFEK-----LDLKRCNLTDKCVLGLCSMIKQSTQLTTLLLPDNGFHD 525

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
                I +A++ N +I  +D+  N +  K    I +V++ N +   LD
Sbjct: 526 SSGIVICEAIRVNSSILNLDICENPLSYKYIDQINKVIESNRLKYELD 573


>gi|403254159|ref|XP_003919845.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14
           [Saimiri boliviensis boliviensis]
          Length = 1093

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 153/318 (48%), Gaps = 4/318 (1%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +  +L  N  LR L+L+++ +D S      + L+         L   +  + G   ++  
Sbjct: 665 LCSVLHTNEHLRELDLSHSNLDKSAMNIFHQELMHPDCKLQKLLLKFFTFSDGCQDISTS 724

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L  N++L+ L L G+ IGD G+++L   L     KL  L + + +++     +++  +  
Sbjct: 725 LIHNQNLKHLDLKGSDIGDNGVKSLCEALKHPDCKLQTLRLESCNLTVFCCLNISNALIR 784

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +SL+++NL  N++ D+G + + +AL+     +  + L    +   G   ++  L  N  
Sbjct: 785 SQSLIFLNLSTNNLLDDGVQLLCEALRHPECYLERLSLESCGLTEAGCEDLSLALISNKR 844

Query: 445 ITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           +T L LA N +G  G K +S+ L+     + +L L  C   +   E ++  L YN +++ 
Sbjct: 845 LTHLCLADNVLGDGGVKLISDALQHPQCTLQSLVLRRCHFTSLSTEHLSTSLLYNKSLTH 904

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           LDL +N L+D+GAK L   F+  +  L  ++L    + +     +A  +  N ++   SL
Sbjct: 905 LDLGSNSLQDDGAKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNSNLR--SL 962

Query: 564 NLANNFLTKFGQSALTDA 581
           +L NN L   G   L DA
Sbjct: 963 DLGNNNLQDDGVKILCDA 980



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 148/320 (46%), Gaps = 5/320 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD G+  L E+L +     + +   +  +T          L  + +L  LNL
Sbjct: 734  LDLKGSDIGDNGVKSLCEALKHPDCKLQTLRLESCNLTVFCCLNISNALIRSQSLIFLNL 793

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GV+ LC+ L      +ERL L S  L + G + ++  L +N  L  L L +N
Sbjct: 794  STNNLLDDGVQLLCEALRHPECYLERLSLESCGLTEAGCEDLSLALISNKRLTHLCLADN 853

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   +++AL     T++SL L   +  +L    L+  L  NKSL  L L  NS+ 
Sbjct: 854  VLGDGGVKLISDALQHPQCTLQSLVLRRCHFTSLSTEHLSTSLLYNKSLTHLDLGSNSLQ 913

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D+G + L          L  L++    ++      +A  I N  +L  ++L  N++ D+G
Sbjct: 914  DDGAKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNSNLRSLDLGNNNLQDDG 973

Query: 404  AEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + DAL+  N  I  + L    + S     ++  L  N  +  ++L  N +G +G   
Sbjct: 974  VKILCDALRHPNCNIQRLGLEYCGLTSLCCQDLSSALSINQRLIKMNLTQNILGYEGIAK 1033

Query: 463  LSEVLKFHGNINTLKLGWCQ 482
            L EVLK     N   LG C+
Sbjct: 1034 LCEVLK-SPECNLQVLGLCK 1052



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 175/374 (46%), Gaps = 7/374 (1%)

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLC-DILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             VL +N  L+ L+LS + +    +     +++  +  +++L L      D G + I+  L
Sbjct: 667  SVLHTNEHLRELDLSHSNLDKSAMNIFHQELMHPDCKLQKLLLKFFTFSD-GCQDISTSL 725

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN 329
             +N  L+ L+L  + I  +G  SL EAL   +  +++L L            ++  L  +
Sbjct: 726  IHNQNLKHLDLKGSDIGDNGVKSLCEALKHPDCKLQTLRLESCNLTVFCCLNISNALIRS 785

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL  L+L  N++ D+G++ L   L   +  L  L + +  ++  G   ++  + + K L
Sbjct: 786  QSLIFLNLSTNNLLDDGVQLLCEALRHPECYLERLSLESCGLTEAGCEDLSLALISNKRL 845

Query: 390  LWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              + L  N +GD G + I+DAL+  + T+ ++ L   +  S     ++  L  N  +T L
Sbjct: 846  THLCLADNVLGDGGVKLISDALQHPQCTLQSLVLRRCHFTSLSTEHLSTSLLYNKSLTHL 905

Query: 449  DLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            DL  N +  DGAK L +V +    N+  L+L  C +  +    +A ++  N+ +  LDL 
Sbjct: 906  DLGSNSLQDDGAKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNSNLRSLDLG 965

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
             N L+D+G K L  + +  N  +  + L +  +       ++ AL  N+   +  +NL  
Sbjct: 966  NNNLQDDGVKILCDALRHPNCNIQRLGLEYCGLTSLCCQDLSSALSINQ--RLIKMNLTQ 1023

Query: 568  NFLTKFGQSALTDA 581
            N L   G + L + 
Sbjct: 1024 NILGYEGIAKLCEV 1037


>gi|440793894|gb|ELR15065.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 554

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 160/343 (46%), Gaps = 47/343 (13%)

Query: 154 LNEFAKELRAFSS----VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           L+ + + LRA  S    VD+  +  G EG   + E+L  + TA  V   A+ I   G +A
Sbjct: 27  LDWYVQRLRANQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARA 86

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
               L  N +LKT+ L  N IG+E                            GAK IAE 
Sbjct: 87  VGQALLKNRSLKTVFLGCNGIGEE----------------------------GAKYIAEA 118

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           ++NN ++    L  N I  +G  ++  AL  N ++++L L  N  G  GA  L +     
Sbjct: 119 IENNDVVEGYWLKRNQIGLTGLQAILSALRTNQSVKTLDLVQNNLGVEGARLLEEAFVDA 178

Query: 330 K---SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
               S+  L+L GN  G +G R + +G+  R   +  L +G N++  +G   +AE +K  
Sbjct: 179 AHPLSIISLYLSGNEFGVDGARHI-AGIIRRNTTIKHLYLGLNNLGEEGGLLIAEALKEN 237

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG-----------GNNIHSKGASAI 435
           K+LL + +  N++G   A   ADAL+ N T+T +DLG            N I   GA AI
Sbjct: 238 KTLLTLAVLSNELGPRAAATFADALRLNNTLTCLDLGYAKATKALEGKPNVIEDAGAQAI 297

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           A  + +N+ +  L+L  N IG  G  A++E L+ + ++  L L
Sbjct: 298 AAAVAENTSLRVLNLTQNGIGEAGYLAVAEALRTNTSLTHLVL 340



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 163/311 (52%), Gaps = 16/311 (5%)

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           + + V ++ L    L  EGA+ I E L+N++  R + L  + I   G  ++ +ALL+N +
Sbjct: 37  NQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARAVGQALLKNRS 96

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           ++++ L  N  G  GA  +A+ +E N  +    L  N IG  G++A++S L + +  +  
Sbjct: 97  LKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALRTNQS-VKT 155

Query: 364 LDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYM--NDIGDEGAEKIADALKQNRTITTI 420
           LD+  N++  +GA  + E ++     L  I+LY+  N+ G +GA  IA  +++N TI  +
Sbjct: 156 LDLVQNNLGVEGARLLEEAFVDAAHPLSIISLYLSGNEFGVDGARHIAGIIRRNTTIKHL 215

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            LG NN+  +G   IA  LK+N  + +L +  N +G   A   ++ L+ +  +  L LG+
Sbjct: 216 YLGLNNLGEEGGLLIAEALKENKTLLTLAVLSNELGPRAAATFADALRLNNTLTCLDLGY 275

Query: 481 CQ-----------IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
            +           I  +GA+ +A  +  N ++ +L+L  NG+ + G   +A++ +  N +
Sbjct: 276 AKATKALEGKPNVIEDAGAQAIAAAVAENTSLRVLNLTQNGIGEAGYLAVAEALR-TNTS 334

Query: 530 LTSIDLAFNEI 540
           LT + L  N +
Sbjct: 335 LTHLVLDRNRM 345



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 2/193 (1%)

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
           ++V     N  +++ ++L    +G EGA +I +AL+ + T  ++ LG + I  +GA A+ 
Sbjct: 29  WYVQRLRANQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARAVG 88

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           + L  N  + ++ L  N IG +GAK ++E ++ +  +    L   QIG +G + +   LR
Sbjct: 89  QALLKNRSLKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALR 148

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF--NEIRDDGAFAIAQALKA 554
            N ++  LDL  N L  EGA+ L ++F      L+ I L    NE   DGA  IA  ++ 
Sbjct: 149 TNQSVKTLDLVQNNLGVEGARLLEEAFVDAAHPLSIISLYLSGNEFGVDGARHIAGIIRR 208

Query: 555 NEDVAVTSLNLAN 567
           N  +    L L N
Sbjct: 209 NTTIKHLYLGLNN 221



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 32/244 (13%)

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L + +  +  +D+    +  +GA  + E ++N  +   + L  ++IG EGA  +  AL +
Sbjct: 34  LRANQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARAVGQALLK 93

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSV----------------------------I 445
           NR++ T+ LG N I  +GA  IA  +++N V                            +
Sbjct: 94  NRSLKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALRTNQSV 153

Query: 446 TSLDLAYNPIGADGAKALSE--VLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +LDL  N +G +GA+ L E  V   H  +I +L L   + G  GA  +A ++R N TI 
Sbjct: 154 KTLDLVQNNLGVEGARLLEEAFVDAAHPLSIISLYLSGNEFGVDGARHIAGIIRRNTTIK 213

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N L +EG   +A++ K  N+ L ++ +  NE+    A   A AL+ N  +    
Sbjct: 214 HLYLGLNNLGEEGGLLIAEALK-ENKTLLTLAVLSNELGPRAAATFADALRLNNTLTCLD 272

Query: 563 LNLA 566
           L  A
Sbjct: 273 LGYA 276



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 21/269 (7%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+  +V +     G+EG  ++AE++  N   E      N I   G++A    L++N ++K
Sbjct: 95  RSLKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALRTNQSVK 154

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNA---GVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           TL+L  N +G EG + L +  VD A    +  L LS  +   +GA+ IA +++ N+ ++ 
Sbjct: 155 TLDLVQNNLGVEGARLLEEAFVDAAHPLSIISLYLSGNEFGVDGARHIAGIIRRNTTIKH 214

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L  N +   G   +AEAL EN T+ +L +  N  G   A   A  L  N +L  L L 
Sbjct: 215 LYLGLNNLGEEGGLLIAEALKENKTLLTLAVLSNELGPRAAATFADALRLNNTLTCLDL- 273

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
                  G       L  +           N I   GA  +A  +    SL  +NL  N 
Sbjct: 274 -------GYAKATKALEGKP----------NVIEDAGAQAIAAAVAENTSLRVLNLTQNG 316

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNI 427
           IG+ G   +A+AL+ N ++T + L  N +
Sbjct: 317 IGEAGYLAVAEALRTNTSLTHLVLDRNRM 345


>gi|73976559|ref|XP_539499.2| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Canis lupus familiaris]
          Length = 953

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 119/240 (49%), Gaps = 7/240 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   + E +   K L ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVLRLSVNQITDSGVKVLYEELTKYKILTFLGLYSNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + + +T + LG N I S+G   +A  ++++S I  + +  N IG +GAKA +E
Sbjct: 775 YVARILDECKGLTHLKLGENKITSEGGKCLALAVRNSSSILEIGMWGNRIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I   G + +A  L+ N ++ I  L  N L DE A+ LA+  K 
Sbjct: 835 ALRNHPSLTNLSLAFNGISTEGGKSLAQALQRNTSLRIFWLTKNELDDEVAESLAEMLK- 893

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
           VN+ L  + L  N+I   G   +A AL+ N    +T + L  N +         D K +V
Sbjct: 894 VNQTLKHLWLIQNQITAKGIAQLADALQKN--TGITEICLNGNLIKPEEAKVFEDEKRIV 951



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 125/261 (47%), Gaps = 29/261 (11%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + EL    S L VL L+ N I  SG   L E L +                         
Sbjct: 720 VRELQPCFSRLTVLRLSVNQITDSGVKVLYEELTK------------------------- 754

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
               K L  L L+ N I D G R +   L   KG L  L +G N I+++G   +A  ++N
Sbjct: 755 ---YKILTFLGLYSNQITDVGARYVARILDECKG-LTHLKLGENKITSEGGKCLALAVRN 810

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             S+L I ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++A+ L+ N+ +
Sbjct: 811 SSSILEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQRNTSL 870

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
               L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ N  I+ + 
Sbjct: 871 RIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQKNTGITEIC 930

Query: 506 LRANGLRDEGAKCLAQSFKVV 526
           L  N ++ E AK      ++V
Sbjct: 931 LNGNLIKPEEAKVFEDEKRIV 951



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 110/229 (48%), Gaps = 5/229 (2%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L LS N I D GVK L + L     +  L L S  + D GA+ +A +L     L  L
Sbjct: 730 LTVLRLSVNQITDSGVKVLYEELTKYKILTFLGLYSNQITDVGARYVARILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G   LA A+  +S+I  + + GN  G  GA A A+ L  + SL  L L  
Sbjct: 790 KLGENKITSEGGKCLALAVRNSSSILEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAF 849

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  EG ++L   L  R   L +  +  N +  + A  +AE +K  ++L  + L  N I
Sbjct: 850 NGISTEGGKSLAQAL-QRNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQI 908

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             +G  ++ADAL++N  IT I L GN I  +     A+V +D   I   
Sbjct: 909 TAKGIAQLADALQKNTGITEICLNGNLIKPEE----AKVFEDEKRIVCF 953



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 92/200 (46%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L E L   +    +   +N IT  G +    +L     L  L L  N
Sbjct: 735 LSVNQITDSGVKVLYEELTKYKILTFLGLYSNQITDVGARYVARILDECKGLTHLKLGEN 794

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG KCL   + +++ +  + +    + DEGAKA AE L+N+  L  L L  N I  
Sbjct: 795 KITSEGGKCLALAVRNSSSILEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGIST 854

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  SLA+AL  N+++R   L  N      A +LA+ L+ N++L+ L L  N I  +GI 
Sbjct: 855 EGGKSLAQALQRNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIA 914

Query: 349 ALMSGLSSRKGKLAVLDIGN 368
            L   L    G   +   GN
Sbjct: 915 QLADALQKNTGITEICLNGN 934



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 93/194 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E   + +  + + +      D G  ++A  L   +    +    N IT+ G K   
Sbjct: 746 KVLYEELTKYKILTFLGLYSNQITDVGARYVARILDECKGLTHLKLGENKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN IGDEG K   + L ++  +  L L+   +  EG K++A+ L+
Sbjct: 806 LAVRNSSSILEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ LR+  L  N +D     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 RNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQKNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939


>gi|281208565|gb|EFA82741.1| hypothetical protein PPL_04436 [Polysphondylium pallidum PN500]
          Length = 280

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 138/263 (52%), Gaps = 3/263 (1%)

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLS 254
            ++N I   G  +F  V+  N  + +L+LS N I  +GV  + +  ++N  + +  + LS
Sbjct: 1   MSSNCIEDEGAASFAAVVLHNNTVTSLDLSVNWINSDGVVEIANAFLENPNSTITSIDLS 60

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
              +  +GA+A+AE L  +  LR +   +N I+  G   L++++++N T+ SL L+ N  
Sbjct: 61  CNTICPKGARAMAEALSVDCALRHINFFSNNIETDGAYELSKSIIKNHTLTSLELSTNLI 120

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G   L++ L  N ++  L L  + I  EGI+ L+S L S    L  LD+  N I  K
Sbjct: 121 GNEGIKYLSQALLENNTIVSLSLSQSLIAYEGIKYLVS-LISLNHTLTFLDLSYNFIGPK 179

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  ++  ++N K++  ++L  N IGD+GA  IA    +N T+  + L  N I  KGA  
Sbjct: 180 GAEELSLSLENNKTITSLDLSSNSIGDDGATAIAGIFPKNNTLQRLSLYNNKIGPKGAKP 239

Query: 435 IARVLKDNSVITSLDLAYNPIGA 457
           I   L  N  + S++L  N I A
Sbjct: 240 IVENLLKNHSLYSINLLANRIDA 262



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 135/257 (52%), Gaps = 4/257 (1%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG-LSSRKGKLAVLDIGNNSISAKGA 376
           GA + A  +  N ++  L L  N I  +G+  + +  L +    +  +D+  N+I  KGA
Sbjct: 10  GAASFAAVVLHNNTVTSLDLSVNWINSDGVVEIANAFLENPNSTITSIDLSCNTICPKGA 69

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             +AE +    +L  IN + N+I  +GA +++ ++ +N T+T+++L  N I ++G   ++
Sbjct: 70  RAMAEALSVDCALRHINFFSNNIETDGAYELSKSIIKNHTLTSLELSTNLIGNEGIKYLS 129

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           + L +N+ I SL L+ + I  +G K L  ++  +  +  L L +  IG  GAE ++  L 
Sbjct: 130 QALLENNTIVSLSLSQSLIAYEGIKYLVSLISLNHTLTFLDLSYNFIGPKGAEELSLSLE 189

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            N TI+ LDL +N + D+GA  +A  F   N  L  + L  N+I   GA  I + L  N 
Sbjct: 190 NNKTITSLDLSSNSIGDDGATAIAGIFP-KNNTLQRLSLYNNKIGPKGAKPIVENLLKNH 248

Query: 557 DVAVTSLNLANNFLTKF 573
             ++ S+NL  N +  +
Sbjct: 249 --SLYSINLLANRIDAY 263



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 5/238 (2%)

Query: 165 SSVDMSGRNFGDEGLFFLAESL--GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +S+D+S      +G+  +A +     N T   +  + N I   G +A    L  + AL+ 
Sbjct: 25  TSLDLSVNWINSDGVVEIANAFLENPNSTITSIDLSCNTICPKGARAMAEALSVDCALRH 84

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSILRVLEL 281
           +N   N I  +G   L   ++ N  +  L+LS+  + +EG K +++ LL+NN+I+  L L
Sbjct: 85  INFFSNNIETDGAYELSKSIIKNHTLTSLELSTNLIGNEGIKYLSQALLENNTIVS-LSL 143

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           + ++I Y G   L   +  N T+  L L+ N+ G  GA  L+  LE NK++  L L  NS
Sbjct: 144 SQSLIAYEGIKYLVSLISLNHTLTFLDLSYNFIGPKGAEELSLSLENNKTITSLDLSSNS 203

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           IGD+G  A ++G+  +   L  L + NN I  KGA  + E +    SL  INL  N I
Sbjct: 204 IGDDGATA-IAGIFPKNNTLQRLSLYNNKIGPKGAKPIVENLLKNHSLYSINLLANRI 260



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 95/192 (49%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             +S+D+S      +G   +AE+L  +     ++F +N I   G       +  N  L +
Sbjct: 53  TITSIDLSCNTICPKGARAMAEALSVDCALRHINFFSNNIETDGAYELSKSIIKNHTLTS 112

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L LS N IG+EG+K L   L++N  +  L LS   +  EG K +  L+  N  L  L+L+
Sbjct: 113 LELSTNLIGNEGIKYLSQALLENNTIVSLSLSQSLIAYEGIKYLVSLISLNHTLTFLDLS 172

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G   L+ +L  N TI SL L+ N  G  GA A+A     N +L+ L L+ N I
Sbjct: 173 YNFIGPKGAEELSLSLENNKTITSLDLSSNSIGDDGATAIAGIFPKNNTLQRLSLYNNKI 232

Query: 343 GDEGIRALMSGL 354
           G +G + ++  L
Sbjct: 233 GPKGAKPIVENL 244



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 87/166 (52%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
              +S+++S    G+EG+ +L+++L  N T   +S + + I   GIK    ++  N  L 
Sbjct: 108 HTLTSLELSTNLIGNEGIKYLSQALLENNTIVSLSLSQSLIAYEGIKYLVSLISLNHTLT 167

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+LS N IG +G + L   L +N  +  L LSS  + D+GA AIA +   N+ L+ L L
Sbjct: 168 FLDLSYNFIGPKGAEELSLSLENNKTITSLDLSSNSIGDDGATAIAGIFPKNNTLQRLSL 227

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
            NN I   G   + E LL+N ++ S++L  N   A     + K LE
Sbjct: 228 YNNKIGPKGAKPIVENLLKNHSLYSINLLANRIDAYILKPIVKRLE 273



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 90/180 (50%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   ++    N   +G + L++S+  N T   +  + N I   GIK     L  N  + +
Sbjct: 81  ALRHINFFSNNIETDGAYELSKSIIKNHTLTSLELSTNLIGNEGIKYLSQALLENNTIVS 140

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS + I  EG+K L  ++  N  +  L LS   +  +GA+ ++  L+NN  +  L+L+
Sbjct: 141 LSLSQSLIAYEGIKYLVSLISLNHTLTFLDLSYNFIGPKGAEELSLSLENNKTITSLDLS 200

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G T++A    +N+T++ L L  N  G  GA  + + L  N SL  ++L  N I
Sbjct: 201 SNSIGDDGATAIAGIFPKNNTLQRLSLYNNKIGPKGAKPIVENLLKNHSLYSINLLANRI 260



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 3/144 (2%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN--INTLKLG 479
           +  N I  +GA++ A V+  N+ +TSLDL+ N I +DG   ++     + N  I ++ L 
Sbjct: 1   MSSNCIEDEGAASFAAVVLHNNTVTSLDLSVNWINSDGVVEIANAFLENPNSTITSIDLS 60

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
              I   GA  +A+ L  +  +  ++  +N +  +GA  L++S  + N  LTS++L+ N 
Sbjct: 61  CNTICPKGARAMAEALSVDCALRHINFFSNNIETDGAYELSKSI-IKNHTLTSLELSTNL 119

Query: 540 IRDDGAFAIAQALKANEDVAVTSL 563
           I ++G   ++QAL  N  +   SL
Sbjct: 120 IGNEGIKYLSQALLENNTIVSLSL 143



 Score = 46.2 bits (108), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           + +N + DEGA   A +  + N  +TS+DL+ N I  DG   IA A   N +  +TS++L
Sbjct: 1   MSSNCIEDEGAASFA-AVVLHNNTVTSLDLSVNWINSDGVVEIANAFLENPNSTITSIDL 59

Query: 566 ANNFLTKFGQSALTDAKDLVYEMSEKEVNIF 596
           + N +   G  A+ +A  L  + + + +N F
Sbjct: 60  SCNTICPKGARAMAEA--LSVDCALRHINFF 88


>gi|157871015|ref|XP_001684057.1| conserved hypothetical protein [Leishmania major strain Friedlin]
 gi|68127125|emb|CAJ04759.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 429

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 162/340 (47%), Gaps = 5/340 (1%)

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           +S+  + T++L  N +G  G   +   L +++ V  + +   D+  EG   +A ++  + 
Sbjct: 24  ESDTPIHTIDLMDNQLGPTGAVKIASCL-ESSPVTEVFICYNDIGKEGCDGLAGVVNLSH 82

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L+VL++  N +  S    L  ++  ++ ++ L L  N  G  GA   AK LE N  L  
Sbjct: 83  SLQVLDIRGNQLSASDVHRLLRSVSMSTALKRLGLASNRLGPEGAALTAKALERNTYLSS 142

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N +G  G   L   L +    L VL +  N +   G   + + +K  K L  + L
Sbjct: 143 LDLSVNELGPSGAEWLAGILRNSVLALRVLQLHGNYLGPTGVMAICDAVKTNKELRRLTL 202

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYN 453
             N   DE A  +A  L+ N T+  +D+  N + + G   IAR  L  N+ +  L L+ N
Sbjct: 203 GNNHATDEAAGAVAAMLEANDTLEELDICLNTLTANGVRTIARQGLAKNTSLAVLSLSGN 262

Query: 454 PIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            +G  GA  L++VL  H    +  L L  C + ASG   VA +L  + ++  ++L  N L
Sbjct: 263 EVGPVGANELTQVLTSHQRSVLKQLDLSSCGLTASGGARVASLLSTSMSLKEINLSDNAL 322

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
            DE A  LAQ+       ++ +D++ N+I ++GA  +  A
Sbjct: 323 DDEAAVRLAQNI-TDGITISVVDVSCNKIGEEGASQLIDA 361



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 141/269 (52%), Gaps = 5/269 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI-ALK 221
           A   + ++    G EG    A++L  N     +  + N +  +G +   G+L++++ AL+
Sbjct: 111 ALKRLGLASNRLGPEGAALTAKALERNTYLSSLDLSVNELGPSGAEWLAGILRNSVLALR 170

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L GN +G  GV  +CD +  N  + RL L +    DE A A+A +L+ N  L  L++
Sbjct: 171 VLQLHGNYLGPTGVMAICDAVKTNKELRRLTLGNNHATDEAAGAVAAMLEANDTLEELDI 230

Query: 282 NNNMIDYSGFTSLA-EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS--LRELHLH 338
             N +  +G  ++A + L +N+++  L L+GN  G +GAN L + L  ++   L++L L 
Sbjct: 231 CLNTLTANGVRTIARQGLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLKQLDLS 290

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
              +   G  A ++ L S    L  +++ +N++  + A  +A+ I +  ++  +++  N 
Sbjct: 291 SCGLTASG-GARVASLLSTSMSLKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNK 349

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNI 427
           IG+EGA ++ DA  +N  +  +   GNNI
Sbjct: 350 IGEEGASQLIDAAVRNAQLVALVTNGNNI 378



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 158/335 (47%), Gaps = 8/335 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             ++D+     G  G   +A  L  +    EV    N I   G     GV+  + +L+ L
Sbjct: 29  IHTIDLMDNQLGPTGAVKIASCL-ESSPVTEVFICYNDIGKEGCDGLAGVVNLSHSLQVL 87

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++ GN +    V  L   +  +  ++RL L+S  L  EGA   A+ L+ N+ L  L+L+ 
Sbjct: 88  DIRGNQLSASDVHRLLRSVSMSTALKRLGLASNRLGPEGAALTAKALERNTYLSSLDLSV 147

Query: 284 NMIDYSGFTSLAEALLENST--IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           N +  SG   LA  +L NS   +R L L+GNY G  G  A+   ++ NK LR L L  N 
Sbjct: 148 NELGPSGAEWLA-GILRNSVLALRVLQLHGNYLGPTGVMAICDAVKTNKELRRLTLGNNH 206

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIG 400
             DE   A+ + L +    L  LDI  N+++A G   +A + +    SL  ++L  N++G
Sbjct: 207 ATDEAAGAVAAMLEAND-TLEELDICLNTLTANGVRTIARQGLAKNTSLAVLSLSGNEVG 265

Query: 401 DEGAEKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
             GA ++   L   Q   +  +DL    + + G + +A +L  +  +  ++L+ N +  +
Sbjct: 266 PVGANELTQVLTSHQRSVLKQLDLSSCGLTASGGARVASLLSTSMSLKEINLSDNALDDE 325

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            A  L++ +     I+ + +   +IG  GA  + D
Sbjct: 326 AAVRLAQNITDGITISVVDVSCNKIGEEGASQLID 360



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 8/188 (4%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK--AFDGVLQS 216
           KELR  +   +   +  DE    +A  L  N T EE+    N +TA G++  A  G L  
Sbjct: 195 KELRRLT---LGNNHATDEAAGAVAAMLEANDTLEELDICLNTLTANGVRTIARQG-LAK 250

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           N +L  L+LSGN +G  G   L  +L  +  + +++L LSS  L   G   +A LL  + 
Sbjct: 251 NTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLKQLDLSSCGLTASGGARVASLLSTSM 310

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L+ + L++N +D      LA+ + +  TI  + ++ N  G  GA+ L      N  L  
Sbjct: 311 SLKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNKIGEEGASQLIDAAVRNAQLVA 370

Query: 335 LHLHGNSI 342
           L  +GN+I
Sbjct: 371 LVTNGNNI 378


>gi|320170914|gb|EFW47813.1| hypothetical protein CAOG_05751 [Capsaspora owczarzaki ATCC 30864]
          Length = 426

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 122/240 (50%), Gaps = 38/240 (15%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           ERL L+   + D GA+A+AE LK +++L +LEL  N I   G  ++AEAL  N+ + +L 
Sbjct: 100 ERLFLNKQQIDDAGAEAVAEALKVSTLL-ILELETNQIGEGGARAIAEALKVNTPLTTLM 158

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N  G  GA A+A+ LE N +L  L L+ N IG  G +A+   L   +G         
Sbjct: 159 LHQNQIGYAGALAIAEALEVNDTLIYLGLNANQIGAAGAQAIAEALKVNRG--------- 209

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
                               L+ + L+ N IGD GA+ IA+ALK N+T+  ++L  N I 
Sbjct: 210 --------------------LIQLFLHENQIGDAGAQAIAEALKVNKTLWRLNLDKNRIG 249

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG--------NINTLKLGW 480
             GA AIA  LK N ++  L L +N IG  G++AL E  K +G         IN L   W
Sbjct: 250 DAGAQAIAETLKVNKMLIELSLRWNCIGNRGSQALDEARKVNGFRELFSELQINPLVFSW 309



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 110/192 (57%), Gaps = 2/192 (1%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +    I   GA  VAE +K   +LL + L  N IG+ GA  IA+ALK N  +TT+ L 
Sbjct: 102 LFLNKQQIDDAGAEAVAEALK-VSTLLILELETNQIGEGGARAIAEALKVNTPLTTLMLH 160

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I   GA AIA  L+ N  +  L L  N IGA GA+A++E LK +  +  L L   QI
Sbjct: 161 QNQIGYAGALAIAEALEVNDTLIYLGLNANQIGAAGAQAIAEALKVNRGLIQLFLHENQI 220

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G +GA+ +A+ L+ N T+  L+L  N + D GA+ +A++ K VN+ L  + L +N I + 
Sbjct: 221 GDAGAQAIAEALKVNKTLWRLNLDKNRIGDAGAQAIAETLK-VNKMLIELSLRWNCIGNR 279

Query: 544 GAFAIAQALKAN 555
           G+ A+ +A K N
Sbjct: 280 GSQALDEARKVN 291



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 109/192 (56%), Gaps = 2/192 (1%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L+   I D G + + + L   + +  L+L +  + + GA+AIAE LK N+ L  L L+
Sbjct: 102 LFLNKQQIDDAGAEAVAEAL-KVSTLLILELETNQIGEGGARAIAEALKVNTPLTTLMLH 160

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I Y+G  ++AEAL  N T+  L LN N  GA GA A+A+ L+ N+ L +L LH N I
Sbjct: 161 QNQIGYAGALAIAEALEVNDTLIYLGLNANQIGAAGAQAIAEALKVNRGLIQLFLHENQI 220

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A+   L   K  L  L++  N I   GA  +AE +K  K L+ ++L  N IG+ 
Sbjct: 221 GDAGAQAIAEALKVNK-TLWRLNLDKNRIGDAGAQAIAETLKVNKMLIELSLRWNCIGNR 279

Query: 403 GAEKIADALKQN 414
           G++ + +A K N
Sbjct: 280 GSQALDEARKVN 291



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 113/193 (58%), Gaps = 6/193 (3%)

Query: 394 LYMN--DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           L++N   I D GAE +A+ALK + T+  ++L  N I   GA AIA  LK N+ +T+L L 
Sbjct: 102 LFLNKQQIDDAGAEAVAEALKVS-TLLILELETNQIGEGGARAIAEALKVNTPLTTLMLH 160

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA A++E L+ +  +  L L   QIGA+GA+ +A+ L+ N  +  L L  N +
Sbjct: 161 QNQIGYAGALAIAEALEVNDTLIYLGLNANQIGAAGAQAIAEALKVNRGLIQLFLHENQI 220

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            D GA+ +A++ KV N+ L  ++L  N I D GA AIA+ LK N+   +  L+L  N + 
Sbjct: 221 GDAGAQAIAEALKV-NKTLWRLNLDKNRIGDAGAQAIAETLKVNK--MLIELSLRWNCIG 277

Query: 572 KFGQSALTDAKDL 584
             G  AL +A+ +
Sbjct: 278 NRGSQALDEARKV 290



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 104/196 (53%), Gaps = 2/196 (1%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K+   L L+   I D G  A+   L  +   L +L++  N I   GA  +AE +K    L
Sbjct: 97  KTRERLFLNKQQIDDAGAEAVAEAL--KVSTLLILELETNQIGEGGARAIAEALKVNTPL 154

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N IG  GA  IA+AL+ N T+  + L  N I + GA AIA  LK N  +  L 
Sbjct: 155 TTLMLHQNQIGYAGALAIAEALEVNDTLIYLGLNANQIGAAGAQAIAEALKVNRGLIQLF 214

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L  N IG  GA+A++E LK +  +  L L   +IG +GA+ +A+ L+ N  +  L LR N
Sbjct: 215 LHENQIGDAGAQAIAEALKVNKTLWRLNLDKNRIGDAGAQAIAETLKVNKMLIELSLRWN 274

Query: 510 GLRDEGAKCLAQSFKV 525
            + + G++ L ++ KV
Sbjct: 275 CIGNRGSQALDEARKV 290



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 106/218 (48%), Gaps = 30/218 (13%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           LN   ID +G  ++AEAL + ST+  L L  N  G  GA A+A+ L+ N  L  L LH N
Sbjct: 104 LNKQQIDDAGAEAVAEAL-KVSTLLILELETNQIGEGGARAIAEALKVNTPLTTLMLHQN 162

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IG                               GA  +AE ++   +L+++ L  N IG
Sbjct: 163 QIG-----------------------------YAGALAIAEALEVNDTLIYLGLNANQIG 193

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             GA+ IA+ALK NR +  + L  N I   GA AIA  LK N  +  L+L  N IG  GA
Sbjct: 194 AAGAQAIAEALKVNRGLIQLFLHENQIGDAGAQAIAEALKVNKTLWRLNLDKNRIGDAGA 253

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           +A++E LK +  +  L L W  IG  G++ + +  + N
Sbjct: 254 QAIAETLKVNKMLIELSLRWNCIGNRGSQALDEARKVN 291



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 98/194 (50%), Gaps = 1/194 (0%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F K  +    + ++ +   D G   +AE+L  + T   +    N I   G +A    L+ 
Sbjct: 92  FNKVWKTRERLFLNKQQIDDAGAEAVAEALKVS-TLLILELETNQIGEGGARAIAEALKV 150

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L TL L  N IG  G   + + L  N  +  L L++  +   GA+AIAE LK N  L
Sbjct: 151 NTPLTTLMLHQNQIGYAGALAIAEALEVNDTLIYLGLNANQIGAAGAQAIAEALKVNRGL 210

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L+ N I  +G  ++AEAL  N T+  L+L+ N  G  GA A+A+ L+ NK L EL 
Sbjct: 211 IQLFLHENQIGDAGAQAIAEALKVNKTLWRLNLDKNRIGDAGAQAIAETLKVNKMLIELS 270

Query: 337 LHGNSIGDEGIRAL 350
           L  N IG+ G +AL
Sbjct: 271 LRWNCIGNRGSQAL 284



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 1/169 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++     G+ G   +AE+L  N     +    N I  AG  A    L+ N  L  L L+
Sbjct: 129 LELETNQIGEGGARAIAEALKVNTPLTTLMLHQNQIGYAGALAIAEALEVNDTLIYLGLN 188

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IG  G + + + L  N G+ +L L    + D GA+AIAE LK N  L  L L+ N I
Sbjct: 189 ANQIGAAGAQAIAEALKVNRGLIQLFLHENQIGDAGAQAIAEALKVNKTLWRLNLDKNRI 248

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
             +G  ++AE L  N  +  L L  N  G  G+ AL +  + N   REL
Sbjct: 249 GDAGAQAIAETLKVNKMLIELSLRWNCIGNRGSQALDEARKVN-GFREL 296



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 65/134 (48%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++ +     G  G   +AE+L  N T   +   AN I AAG +A    L+ N  L  L
Sbjct: 154 LTTLMLHQNQIGYAGALAIAEALEVNDTLIYLGLNANQIGAAGAQAIAEALKVNRGLIQL 213

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N IGD G + + + L  N  + RL L    + D GA+AIAE LK N +L  L L  
Sbjct: 214 FLHENQIGDAGAQAIAEALKVNKTLWRLNLDKNRIGDAGAQAIAETLKVNKMLIELSLRW 273

Query: 284 NMIDYSGFTSLAEA 297
           N I   G  +L EA
Sbjct: 274 NCIGNRGSQALDEA 287


>gi|297680729|ref|XP_002818131.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 isoform 2 [Pongo abelii]
          Length = 953

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELRPCFS----RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKRLTHLKLGKNKITSEGGKCLALAVKNSKSISEVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++ TL L    I   G + +A  L+ N ++ IL L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL++N  +    LN
Sbjct: 895 -NQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLN 932



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   K +L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECK-RLTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N I ++G  ++AR
Sbjct: 803 CLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQS 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I+ + L  N ++ E AK      +++
Sbjct: 923 NTGITEICLNGNLIKPEEAKVYEDEKRII 951



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VRELRPCFSRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKRLTHLKLGKNKITSEGGKCLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L +N I   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L S  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKRLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NGI+ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGIST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELNDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 77/139 (55%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T L L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L     ++
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKRLT 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG KCLA + K  +++++ + +  N++ D+GA A A+AL+ +   ++T+
Sbjct: 788 HLKLGKNKITSEGGKCLALAVKN-SKSISEVGMWGNQVGDEGAKAFAEALRNHP--SLTT 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA+N ++  G  +L  A
Sbjct: 845 LSLASNGISTEGGKSLARA 863


>gi|14042074|dbj|BAB55096.1| unnamed protein product [Homo sapiens]
 gi|14042078|dbj|BAB55098.1| unnamed protein product [Homo sapiens]
          Length = 753

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 162/346 (46%), Gaps = 14/346 (4%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 384 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 443

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L++ +++ S    L   L + + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 444 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 503

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 504 QIGDAGVQHLATILPGLP-ELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALG 562

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D  A  +A  L Q+  +  + L  +++   GA ++A+ L     +  + LA N +     
Sbjct: 563 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGFPHLEEISLAENNLAGG-- 618

Query: 461 KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE A 
Sbjct: 619 -----VLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAA 673

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
            LAQ    +   L  +D   N+I   GA+ +A+ L     + V  L
Sbjct: 674 ELAQVLPQMGR-LKRVDPEKNQITALGAWLLAEGLAQGSSIQVIRL 718



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 138/341 (40%), Gaps = 59/341 (17%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSG--------- 227
           EGL  LA  LG+    EE+  + N     G KA    L+    LK L+LS          
Sbjct: 396 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLA 455

Query: 228 -------------------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                              N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 456 LLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 515

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEAL-----LEN---------------------S 302
           +L     LR ++L+ N I  +G   LAE+L     LE                       
Sbjct: 516 ILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 575

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            +R LHL  ++ G  GA +LA+ L+G   L E+ L  N++    +R  M     R+    
Sbjct: 576 HLRVLHLPFSHLGPGGALSLAQALDGFPHLEEISLAENNLAGGVLRFCMELPLLRQ---- 631

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            +D+ +  I  + A  +     +C +L  I L  N +GDE A ++A  L Q   +  +D 
Sbjct: 632 -IDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDP 690

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 691 EKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHL 731



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 148/364 (40%), Gaps = 57/364 (15%)

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN-NMI--DYSGFTSLAEALLE 300
           +N     L+L+  DL    +  + +L++  + L+ L L+  N+   D +    L   LL 
Sbjct: 320 ENPEAVALRLAHCDLGAHHSLLVGQLMETCARLQQLSLSQVNLCEDDDASSLLLQSLLLS 379

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS----- 355
            S +++  L  +     G   LA GL     L EL L  N   +EG +ALM  L      
Sbjct: 380 LSELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWML 439

Query: 356 ----------------------SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
                                 S+   L  L +  NSI   G  H++E ++   SL  ++
Sbjct: 440 KRLDLSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELD 499

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IGD G + +A  L     +  IDL GN+I S G   +A  L     +  L L  N
Sbjct: 500 LSHNQIGDAGVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCN 559

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD-------------------- 493
            +G   A  L++ L  H  +  L L +  +G  GA  +A                     
Sbjct: 560 ALGDPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGFPHLEEISLAENNLAG 617

Query: 494 -MLRYNNTISIL---DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
            +LR+   + +L   DL +  + ++ AK L  SF     AL  I L++N + D+ A  +A
Sbjct: 618 GVLRFCMELPLLRQIDLVSCKIDNQTAKLLTSSFTSC-PALEVILLSWNLLGDEAAAELA 676

Query: 550 QALK 553
           Q L 
Sbjct: 677 QVLP 680



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 5/218 (2%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DL   
Sbjct: 388 LTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHL 447

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            ++S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG 
Sbjct: 448 LLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGD 507

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
           +G + +A +L     +  +DL  N +   G   LA+S  V+   L  + L  N + D  A
Sbjct: 508 AGVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESL-VLCRRLEELMLGCNALGDPTA 566

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
             +AQ L  +  V    L+L  + L   G  +L  A D
Sbjct: 567 LGLAQELPQHLRV----LHLPFSHLGPGGALSLAQALD 600


>gi|120577638|gb|AAI30224.1| Nlrc3 protein [Mus musculus]
          Length = 239

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 108/182 (59%), Gaps = 4/182 (2%)

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           K+C+ +  I+L  N IG++GA+ +A +L  NR++ T+DL  N+I   GA A+A  LK N 
Sbjct: 27  KDCR-IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINR 85

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            +TSL L  N I  DG   ++E L  +  I+ L+L    IG  GA+ +AD L+ N ++  
Sbjct: 86  TLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKA 145

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           L   +N + D GA  LA++ KV N+ L ++DL  N I D G   + +AL +N+   ++SL
Sbjct: 146 LMFSSNTIGDRGAIALAEALKV-NQILENLDLQSNSISDMGVTVLMRALCSNQ--TLSSL 202

Query: 564 NL 565
           NL
Sbjct: 203 NL 204



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 1/200 (0%)

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D  +  L S LS +  ++  + +  N I  KGA  +A  +   +SL+ ++L 
Sbjct: 6   RLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITLDLR 65

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG  GA+ +ADALK NRT+T++ L  N I   G   +A  L  N  I+ L L  N I
Sbjct: 66  SNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLI 125

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G  GA+ +++ LK + ++  L      IG  GA  +A+ L+ N  +  LDL++N + D G
Sbjct: 126 GLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMG 185

Query: 516 AKCLAQSFKVVNEALTSIDL 535
              L ++    N+ L+S++L
Sbjct: 186 VTVLMRAL-CSNQTLSSLNL 204



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 1/186 (0%)

Query: 174 FGDEGLFFLAESL-GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           F D  +  L   L G +    ++S A N I   G KA    L  N +L TL+L  N IG 
Sbjct: 12  FQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGP 71

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G K L D L  N  +  L L S  ++D+G   +AE L +N  + +L+L  N+I   G  
Sbjct: 72  PGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQ 131

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +A+AL +N ++++L  + N  G  GA ALA+ L+ N+ L  L L  NSI D G+  LM 
Sbjct: 132 QMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMR 191

Query: 353 GLSSRK 358
            L S +
Sbjct: 192 ALCSNQ 197



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 87/171 (50%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + ++    G++G   LA SL  N++   +   +N I   G KA    L+ N  L +L+L 
Sbjct: 34  ISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQ 93

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I D+GV C+ + LV N  +  LQL    +   GA+ +A+ LK N  L+ L  ++N I
Sbjct: 94  SNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTI 153

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
              G  +LAEAL  N  + +L L  N    +G   L + L  N++L  L+L
Sbjct: 154 GDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 204



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 75/148 (50%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+  ++D+   + G  G   LA++L  N+T   +S  +N I   G+      L SN  + 
Sbjct: 57  RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 116

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L  N IG  G + + D L  N  ++ L  SS  + D GA A+AE LK N IL  L+L
Sbjct: 117 MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 176

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHL 309
            +N I   G T L  AL  N T+ SL+L
Sbjct: 177 QSNSISDMGVTVLMRALCSNQTLSSLNL 204



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 1/175 (0%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + ++ L+   + ++GAKA+A  L  N  L  L+L +N I   G  +LA+AL  N T+ SL
Sbjct: 31  IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSL 90

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L  N     G   +A+ L  N+++  L L  N IG  G + +   L   +  L  L   
Sbjct: 91  SLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRS-LKALMFS 149

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           +N+I  +GA  +AE +K  + L  ++L  N I D G   +  AL  N+T+++++L
Sbjct: 150 SNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNL 204



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 3/109 (2%)

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           I  + L   QIG  GA+ +A  L  N ++  LDLR+N +   GAK LA + K+ N  LTS
Sbjct: 31  IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKI-NRTLTS 89

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           + L  N I+DDG   +A+AL +N+ +++  L L  N +   G   + DA
Sbjct: 90  LSLQSNVIKDDGVMCVAEALVSNQTISM--LQLQKNLIGLIGAQQMADA 136


>gi|410928299|ref|XP_003977538.1| PREDICTED: ribonuclease inhibitor-like [Takifugu rubripes]
          Length = 444

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 187/397 (47%), Gaps = 27/397 (6%)

Query: 202 ITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLR 259
           ++     +    L+SN + L+ L+LS N + D  V  LCD L++    +E L+L+   L 
Sbjct: 43  LSEVSCDSLASALRSNPSNLRVLDLSENELQDSAVTLLCDFLLNPLCKLETLRLNGCWLS 102

Query: 260 DEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGAL 317
           +    ++A  L++N   LR L+L++N +  S  T L+  LL +   + +L L G +   +
Sbjct: 103 EISCDSLASALRSNPAHLRELDLSDNKLQDSAVTLLSNYLLNHLCELETLRLKGCWLSEI 162

Query: 318 GANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL--------DIGN 368
               LA  L  N S LREL L  NS+ D G++ L SGL S   +L  L        +I  
Sbjct: 163 SCEDLASALRSNPSHLRELDLSYNSLPDSGVKVLCSGLESPNCELETLRLRFCRLSEINC 222

Query: 369 NS-ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNN 426
            S +SA G+ H   +++       ++L  N + D G   +   LK Q   + T+ L G  
Sbjct: 223 ESLVSALGSNH--SHLRE------LDLSQNHLLDSGVMLLCFGLKTQTYKLETLRLNGCR 274

Query: 427 IHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIG 484
           +      ++A  L+ D S +  LDL+ N +   G   +   L+  +  + TL+L  C + 
Sbjct: 275 VSQISCGSLASALRSDPSPLRELDLSENELQDSGVMLICSGLESPNCELETLRLNGCWLS 334

Query: 485 ASGAEFVADMLRYN-NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
               +++A  LR + + +  LDL  N L+D G K L    +  +  L ++ L    + + 
Sbjct: 335 HISCKYLASALRSDPSPLRELDLSQNELQDSGVKVLCSGLESPSCDLETLRLRCCWLSEI 394

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
              ++A AL++N    +  L+L  N L   G+  L D
Sbjct: 395 SCDSLASALRSNPS-HLRELDLNENSLGDSGEKRLFD 430



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 8/207 (3%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA--FDGVLQSNIA-LKTL 223
           +D+S  +  D G+  L   L   QT +  +   NG   + I        L+S+ + L+ L
Sbjct: 239 LDLSQNHLLDSGVMLLCFGLK-TQTYKLETLRLNGCRVSQISCGSLASALRSDPSPLREL 297

Query: 224 NLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLEL 281
           +LS N + D GV  +C  L   N  +E L+L+   L     K +A  L+++ S LR L+L
Sbjct: 298 DLSENELQDSGVMLICSGLESPNCELETLRLNGCWLSHISCKYLASALRSDPSPLRELDL 357

Query: 282 NNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHG 339
           + N +  SG   L   L   S  + +L L   +   +  ++LA  L  N S LREL L+ 
Sbjct: 358 SQNELQDSGVKVLCSGLESPSCDLETLRLRCCWLSEISCDSLASALRSNPSHLRELDLNE 417

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDI 366
           NS+GD G + L   + S   +L +L +
Sbjct: 418 NSLGDSGEKRLFDLVESPNFELEILKL 444



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 114/275 (41%), Gaps = 39/275 (14%)

Query: 150 SKQTLNEFAKELRAFSS----VDMSGRNFGDEGLFFLAESL-GYNQTAEEVSFAANGITA 204
           S+ +  + A  LR+  S    +D+S  +  D G+  L   L   N   E +      ++ 
Sbjct: 160 SEISCEDLASALRSNPSHLRELDLSYNSLPDSGVKVLCSGLESPNCELETLRLRFCRLSE 219

Query: 205 AGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLC-DILVDNAGVERLQLSSVDLRDEG 262
              ++    L SN + L+ L+LS N + D GV  LC  +      +E L+L+   +    
Sbjct: 220 INCESLVSALGSNHSHLRELDLSQNHLLDSGVMLLCFGLKTQTYKLETLRLNGCRVSQIS 279

Query: 263 AKAIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGAN 320
             ++A  L+++ S LR L+L+ N +  SG   +   L   N  + +L LNG +   +   
Sbjct: 280 CGSLASALRSDPSPLRELDLSENELQDSGVMLICSGLESPNCELETLRLNGCWLSHISCK 339

Query: 321 ALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL--------------- 364
            LA  L  + S LREL L  N + D G++ L SGL S    L  L               
Sbjct: 340 YLASALRSDPSPLRELDLSQNELQDSGVKVLCSGLESPSCDLETLRLRCCWLSEISCDSL 399

Query: 365 --------------DIGNNSISAKGAFHVAEYIKN 385
                         D+  NS+   G   + + +++
Sbjct: 400 ASALRSNPSHLRELDLNENSLGDSGEKRLFDLVES 434


>gi|156355002|ref|XP_001623466.1| predicted protein [Nematostella vectensis]
 gi|156210169|gb|EDO31366.1| predicted protein [Nematostella vectensis]
          Length = 378

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 177/382 (46%), Gaps = 35/382 (9%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G+  +A++L  N T  ++    + +T    +A   +L+ N  +  L+L    IG+ 
Sbjct: 1   LGDAGVASIAKALKVNTTVRKLGIEGSNMTPEAGRALGEMLRHNTTITLLSLFHGNIGNS 60

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   +   L+ N  +E++Q+ +  +   G  A+A++++N +    L+L+ N+I   G  +
Sbjct: 61  GALSIASGLLQNTTLEKIQIENSCIGPTGVSALAKVIQNAT---HLDLSRNIIGTKGAKA 117

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +++ +  +  ++ L ++      LG   +AK L  N +L EL +    I DEG+  L   
Sbjct: 118 ISKVIENSCKLKYLRIDHCNIDVLGVRDIAKALSKNTNLEELSVAYAGIDDEGMCELARS 177

Query: 354 LSSRKGKLAVLDIGNNSISAKGA----------------FHVAEYI-------------- 383
           ++  K  L VL I  N+IS  G                 FH  + I              
Sbjct: 178 VAKNK-SLQVLTITYNNISEIGKRAIIKACAESQSLNHLFHENDPILNTCLKPHSVLFKS 236

Query: 384 -KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
            KN  +L  I++ +N +GD  A ++A  L  N ++  +  GG  +   G ++IA+ LK N
Sbjct: 237 LKNNSTLSTIDIGVNSLGDACASELAKVLVDNTSLNVVYFGGEYLGDAGVASIAKALKVN 296

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +  L +  + +  +  +AL E+L+ +  I  L L    IG SGA+ +A  L  N T+ 
Sbjct: 297 TTVRKLGIEGSNMTPEAGRALGEMLRHNTTITLLSLFHGNIGNSGAQGIASGLSQNTTLE 356

Query: 503 ILDLRANGLRDEGAKCLAQSFK 524
            + +  + +   G   LA+  +
Sbjct: 357 KIQIEDSCIGPTGVSALAKVIQ 378



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 167/357 (46%), Gaps = 36/357 (10%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +GD GV  +   L  N  V +L +   ++  E  +A+ E+L++N+ + +L L +  I  S
Sbjct: 1   LGDAGVASIAKALKVNTTVRKLGIEGSNMTPEAGRALGEMLRHNTTITLLSLFHGNIGNS 60

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  S+A  LL+N+T+  + +  +  G  G +ALAK ++   +   L L  N IG +G +A
Sbjct: 61  GALSIASGLLQNTTLEKIQIENSCIGPTGVSALAKVIQ---NATHLDLSRNIIGTKGAKA 117

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           + S +     KL  L I + +I   G   +A+ +    +L  +++    I DEG  ++A 
Sbjct: 118 I-SKVIENSCKLKYLRIDHCNIDVLGVRDIAKALSKNTNLEELSVAYAGIDDEGMCELAR 176

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARV------------------------------- 438
           ++ +N+++  + +  NNI   G  AI +                                
Sbjct: 177 SVAKNKSLQVLTITYNNISEIGKRAIIKACAESQSLNHLFHENDPILNTCLKPHSVLFKS 236

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           LK+NS ++++D+  N +G   A  L++VL  + ++N +  G   +G +G   +A  L+ N
Sbjct: 237 LKNNSTLSTIDIGVNSLGDACASELAKVLVDNTSLNVVYFGGEYLGDAGVASIAKALKVN 296

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            T+  L +  + +  E  + L +  +  N  +T + L    I + GA  IA  L  N
Sbjct: 297 TTVRKLGIEGSNMTPEAGRALGEMLR-HNTTITLLSLFHGNIGNSGAQGIASGLSQN 352



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 166/350 (47%), Gaps = 5/350 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+ + L E  +     + + +   N G+ G   +A  L  N T E++    + I   G+ 
Sbjct: 32  EAGRALGEMLRHNTTITLLSLFHGNIGNSGALSIASGLLQNTTLEKIQIENSCIGPTGVS 91

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A   V+Q+      L+LS N IG +G K +  ++ ++  ++ L++   ++   G + IA+
Sbjct: 92  ALAKVIQN---ATHLDLSRNIIGTKGAKAISKVIENSCKLKYLRIDHCNIDVLGVRDIAK 148

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            L  N+ L  L +    ID  G   LA ++ +N +++ L +  N    +G  A+ K    
Sbjct: 149 ALSKNTNLEELSVAYAGIDDEGMCELARSVAKNKSLQVLTITYNNISEIGKRAIIKACAE 208

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRK--GKLAVLDIGNNSISAKGAFHVAEYIKNC 386
           ++SL  L    + I +  ++       S K    L+ +DIG NS+    A  +A+ + + 
Sbjct: 209 SQSLNHLFHENDPILNTCLKPHSVLFKSLKNNSTLSTIDIGVNSLGDACASELAKVLVDN 268

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
            SL  +      +GD G   IA ALK N T+  + + G+N+  +   A+  +L+ N+ IT
Sbjct: 269 TSLNVVYFGGEYLGDAGVASIAKALKVNTTVRKLGIEGSNMTPEAGRALGEMLRHNTTIT 328

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            L L +  IG  GA+ ++  L  +  +  +++    IG +G   +A +++
Sbjct: 329 LLSLFHGNIGNSGAQGIASGLSQNTTLEKIQIEDSCIGPTGVSALAKVIQ 378


>gi|320164864|gb|EFW41763.1| hypothetical protein CAOG_06895 [Capsaspora owczarzaki ATCC 30864]
          Length = 270

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 100/167 (59%), Gaps = 3/167 (1%)

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           KN   LL +N Y   IGD GA+ IA+AL+ N T+T I L  N+I   GA AIA  LK NS
Sbjct: 19  KNASELLDLNDYQ--IGDAGAQAIAEALRVNTTLTEIRLQRNHIGDVGAQAIAEALKVNS 76

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            +T+L L+ N IG  GA+ ++E LK +  +    L   QIG +GA+ +A  L  NN I  
Sbjct: 77  TLTTLYLSGNQIGDAGAQDIAEALKVNTTLAVFFLRLNQIGDAGAQDIAAALEVNNGIKS 136

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           L+L+ N + D GA  +A++ K VN+ LT +DL+ N + + G  A+ Q
Sbjct: 137 LNLQENQIADVGANAIAEALK-VNKTLTWLDLSQNFLTNTGINALRQ 182



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 99/159 (62%), Gaps = 3/159 (1%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +DL    I   GA AIA  L+ N+ +T + L  N IG  GA+A++E LK +  + TL L 
Sbjct: 25  LDLNDYQIGDAGAQAIAEALRVNTTLTEIRLQRNHIGDVGAQAIAEALKVNSTLTTLYLS 84

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
             QIG +GA+ +A+ L+ N T+++  LR N + D GA+ +A + +V N  + S++L  N+
Sbjct: 85  GNQIGDAGAQDIAEALKVNTTLAVFFLRLNQIGDAGAQDIAAALEV-NNGIKSLNLQENQ 143

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           I D GA AIA+ALK N+   +T L+L+ NFLT  G +AL
Sbjct: 144 IADVGANAIAEALKVNK--TLTWLDLSQNFLTNTGINAL 180



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 88/160 (55%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           +LD+ +  I   GA  +AE ++   +L  I L  N IGD GA+ IA+ALK N T+TT+ L
Sbjct: 24  LLDLNDYQIGDAGAQAIAEALRVNTTLTEIRLQRNHIGDVGAQAIAEALKVNSTLTTLYL 83

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            GN I   GA  IA  LK N+ +    L  N IG  GA+ ++  L+ +  I +L L   Q
Sbjct: 84  SGNQIGDAGAQDIAEALKVNTTLAVFFLRLNQIGDAGAQDIAAALEVNNGIKSLNLQENQ 143

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           I   GA  +A+ L+ N T++ LDL  N L + G   L Q+
Sbjct: 144 IADVGANAIAEALKVNKTLTWLDLSQNFLTNTGINALRQT 183



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 29/189 (15%)

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +L+LN+  I  +G  ++AEAL  N+T+  + L  N+ G +GA A+A+ L+ N +L  L+L
Sbjct: 24  LLDLNDYQIGDAGAQAIAEALRVNTTLTEIRLQRNHIGDVGAQAIAEALKVNSTLTTLYL 83

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            GN IGD                              GA  +AE +K   +L    L +N
Sbjct: 84  SGNQIGD-----------------------------AGAQDIAEALKVNTTLAVFFLRLN 114

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IGD GA+ IA AL+ N  I +++L  N I   GA+AIA  LK N  +T LDL+ N +  
Sbjct: 115 QIGDAGAQDIAAALEVNNGIKSLNLQENQIADVGANAIAEALKVNKTLTWLDLSQNFLTN 174

Query: 458 DGAKALSEV 466
            G  AL + 
Sbjct: 175 TGINALRQT 183



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 96/206 (46%), Gaps = 33/206 (16%)

Query: 150 SKQTLNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           S Q +N+  ++L      A   +D++    GD G   +AE+L  N T  E+    N I  
Sbjct: 3   SYQNMNQRQRQLYDKAKNASELLDLNDYQIGDAGAQAIAEALRVNTTLTEIRLQRNHIGD 62

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +A    L+ N  L TL LSGN IGD G                            A+
Sbjct: 63  VGAQAIAEALKVNSTLTTLYLSGNQIGDAG----------------------------AQ 94

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            IAE LK N+ L V  L  N I  +G   +A AL  N+ I+SL+L  N    +GANA+A+
Sbjct: 95  DIAEALKVNTTLAVFFLRLNQIGDAGAQDIAAALEVNNGIKSLNLQENQIADVGANAIAE 154

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRAL 350
            L+ NK+L  L L  N + + GI AL
Sbjct: 155 ALKVNKTLTWLDLSQNFLTNTGINAL 180



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 78/153 (50%), Gaps = 1/153 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L+   IGD G + + + L  N  +  ++L    + D GA+AIAE LK NS L  L L+
Sbjct: 25  LDLNDYQIGDAGAQAIAEALRVNTTLTEIRLQRNHIGDVGAQAIAEALKVNSTLTTLYLS 84

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G   +AEAL  N+T+    L  N  G  GA  +A  LE N  ++ L+L  N I
Sbjct: 85  GNQIGDAGAQDIAEALKVNTTLAVFFLRLNQIGDAGAQDIAAALEVNNGIKSLNLQENQI 144

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
            D G  A+   L   K  L  LD+  N ++  G
Sbjct: 145 ADVGANAIAEALKVNK-TLTWLDLSQNFLTNTG 176


>gi|407853630|gb|EKG06530.1| hypothetical protein TCSYLVIO_002358 [Trypanosoma cruzi]
          Length = 449

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 186/363 (51%), Gaps = 7/363 (1%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +++ ++ ++L  N +G E  + +  +L +++ V  + L   D+  EG  A+A ++  ++ 
Sbjct: 60  ADVPVRVVDLIDNQLGPEQTQKIASML-ESSTVRDVLLRYNDIGKEGCDALANVVNISTK 118

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L++L++  N +  +    L +++  ++ +  L L+ N  G  GA  L + LE N  L+ L
Sbjct: 119 LQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNVYLKSL 178

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N IG  G  ++   L+     L  L +  N +   G   +A+ +K  K L  + L 
Sbjct: 179 DLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGIALIADAVKGNKCLKDLTLG 238

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNP 454
            N+  D  AE +AD L++N T+ T+DL  N + + G   +AR  L +N  + SL L+ NP
Sbjct: 239 NNNATDAAAEALADMLRENSTLETLDLRSNTLTATGVRILARDGLANNIFLVSLSLSANP 298

Query: 455 IGADGAKALSEVLKFH--GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           IG+ GA  +++ L  H  G +  L L  C++G +G   +A ++    T++ ++L  N L 
Sbjct: 299 IGSVGADEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLD 358

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           +E A  L++S        + +DL+ NEI + GA  +  A + N    ++SL L  N + +
Sbjct: 359 NEAAVVLSKSIVNSISI-SIVDLSANEIGEWGASNLIDATQLN--ARISSLLLHGNNINR 415

Query: 573 FGQ 575
             Q
Sbjct: 416 IVQ 418



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 149/309 (48%), Gaps = 3/309 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G EG   LA  +  +   + +    NG+TAA ++     +  + AL  L LS N IG 
Sbjct: 100 DIGKEGCDALANVVNISTKLQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGH 159

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLELNNNMIDYSGF 291
           EG   L   L  N  ++ L LS  ++   GA++IA LL    S L+ L+L  N +  +G 
Sbjct: 160 EGAALLFRALEKNVYLKSLDLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGI 219

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             +A+A+  N  ++ L L  N      A ALA  L  N +L  L L  N++   G+R L 
Sbjct: 220 ALIADAVKGNKCLKDLTLGNNNATDAAAEALADMLRENSTLETLDLRSNTLTATGVRILA 279

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMNDIGDEGAEKIAD 409
               +    L  L +  N I + GA  +A+   +    +L  ++L   ++G  G  +IA 
Sbjct: 280 RDGLANNIFLVSLSLSANPIGSVGADEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIAS 339

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            +    T+  ++L GN + ++ A  +++ + ++  I+ +DL+ N IG  GA  L +  + 
Sbjct: 340 LIAATITLNEVNLSGNQLDNEAAVVLSKSIVNSISISIVDLSANEIGEWGASNLIDATQL 399

Query: 470 HGNINTLKL 478
           +  I++L L
Sbjct: 400 NARISSLLL 408



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 168/349 (48%), Gaps = 6/349 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+     G E    +A S+  + T  +V    N I   G  A   V+  +  L+ L++ 
Sbjct: 67  VDLIDNQLGPEQTQKIA-SMLESSTVRDVLLRYNDIGKEGCDALANVVNISTKLQLLDIR 125

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +    V+ L   +  +  + RL LS+  +  EGA  +   L+ N  L+ L+L+ N I
Sbjct: 126 GNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNVYLKSLDLSLNEI 185

Query: 287 DYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
             SG  S+A  L L  S +++L L GN+ G  G   +A  ++GNK L++L L GN+   +
Sbjct: 186 GPSGAESIAHLLALPASPLKTLQLYGNHLGVAGIALIADAVKGNKCLKDLTL-GNNNATD 244

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGA 404
                ++ +      L  LD+ +N+++A G   +A + + N   L+ ++L  N IG  GA
Sbjct: 245 AAAEALADMLRENSTLETLDLRSNTLTATGVRILARDGLANNIFLVSLSLSANPIGSVGA 304

Query: 405 EKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           ++IA  L   Q   +T +DL    +   G   IA ++     +  ++L+ N +  + A  
Sbjct: 305 DEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVV 364

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           LS+ +    +I+ + L   +IG  GA  + D  + N  IS L L  N +
Sbjct: 365 LSKSIVNSISISIVDLSANEIGEWGASNLIDATQLNARISSLLLHGNNI 413


>gi|260821111|ref|XP_002605877.1| hypothetical protein BRAFLDRAFT_87451 [Branchiostoma floridae]
 gi|229291213|gb|EEN61887.1| hypothetical protein BRAFLDRAFT_87451 [Branchiostoma floridae]
          Length = 650

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 58/306 (18%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GAKAIA  L  N+ +  L L +N ++  G   +AE L+EN  I  L L+ N  G  G+  
Sbjct: 162 GAKAIATSLVTNTTILKLNLRDNWLEAQGGKYIAEMLVENCYIHDLDLSYNKIGNEGSEP 221

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+ L+ N +L  + L GN  GD+   A+   + S + K+  +D+ +N            
Sbjct: 222 IAEMLQDNSTLERVVLSGNGFGDKAAEAMAEAIMSNQ-KMEEMDLSHN------------ 268

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
                           + G+   E +  A+ +N  +  +DL  N++  KGA A+A  ++D
Sbjct: 269 ----------------EFGEVSGELLGPAIAENSQMKVLDLSWNHLRRKGALAVAEGIRD 312

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  IT LDL++N  G DGA+A+ E LK                             N T+
Sbjct: 313 NITITHLDLSWNGFGDDGAQAIGEALK----------------------------SNKTL 344

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
            +LD+  N +  EGA  LA+   + N+AL  + +  N ++  G + + + +  N + AV 
Sbjct: 345 EVLDMSNNRISTEGAVLLAKGL-IENDALRVLKMGKNPMQSAGCYGVLKGISQNPNSAVQ 403

Query: 562 SLNLAN 567
            L+ ++
Sbjct: 404 ELDFSD 409



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 129/242 (53%), Gaps = 6/242 (2%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY-IKNCKSLLWI 392
           EL +  + +G  G +A+ + L +    L  L++ +N + A+G  ++AE  ++NC  +  +
Sbjct: 150 ELVMMHHGLGPLGAKAIATSLVTNTTILK-LNLRDNWLEAQGGKYIAEMLVENC-YIHDL 207

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N IG+EG+E IA+ L+ N T+  + L GN    K A A+A  +  N  +  +DL++
Sbjct: 208 DLSYNKIGNEGSEPIAEMLQDNSTLERVVLSGNGFGDKAAEAMAEAIMSNQKMEEMDLSH 267

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N  G    + L   +  +  +  L L W  +   GA  VA+ +R N TI+ LDL  NG  
Sbjct: 268 NEFGEVSGELLGPAIAENSQMKVLDLSWNHLRRKGALAVAEGIRDNITITHLDLSWNGFG 327

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           D+GA+ + ++ K  N+ L  +D++ N I  +GA  +A+ L  N+  A+  L +  N +  
Sbjct: 328 DDGAQAIGEALK-SNKTLEVLDMSNNRISTEGAVLLAKGLIEND--ALRVLKMGKNPMQS 384

Query: 573 FG 574
            G
Sbjct: 385 AG 386



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 129/250 (51%), Gaps = 1/250 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S + M     G  G   +A SL  N T  +++   N + A G K    +L  N  +  L+
Sbjct: 149 SELVMMHHGLGPLGAKAIATSLVTNTTILKLNLRDNWLEAQGGKYIAEMLVENCYIHDLD 208

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N IG+EG + + ++L DN+ +ER+ LS     D+ A+A+AE + +N  +  ++L++N
Sbjct: 209 LSYNKIGNEGSEPIAEMLQDNSTLERVVLSGNGFGDKAAEAMAEAIMSNQKMEEMDLSHN 268

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
                    L  A+ ENS ++ L L+ N+    GA A+A+G+  N ++  L L  N  GD
Sbjct: 269 EFGEVSGELLGPAIAENSQMKVLDLSWNHLRRKGALAVAEGIRDNITITHLDLSWNGFGD 328

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           +G +A+   L S K  L VLD+ NN IS +GA  +A+ +    +L  + +  N +   G 
Sbjct: 329 DGAQAIGEALKSNK-TLEVLDMSNNRISTEGAVLLAKGLIENDALRVLKMGKNPMQSAGC 387

Query: 405 EKIADALKQN 414
             +   + QN
Sbjct: 388 YGVLKGISQN 397



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 117/228 (51%), Gaps = 32/228 (14%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ ++++ +    + ++ + +G  GA+ IA +L  N TI  ++L  N + ++G   
Sbjct: 135 GVVPVSYFLRHMQDSELVMMH-HGLGPLGAKAIATSLVTNTTILKLNLRDNWLEAQGGKY 193

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK---------FHGN------------- 472
           IA +L +N  I  LDL+YN IG +G++ ++E+L+           GN             
Sbjct: 194 IAEMLVENCYIHDLDLSYNKIGNEGSEPIAEMLQDNSTLERVVLSGNGFGDKAAEAMAEA 253

Query: 473 ------INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
                 +  + L   + G    E +   +  N+ + +LDL  N LR +GA  +A+  +  
Sbjct: 254 IMSNQKMEEMDLSHNEFGEVSGELLGPAIAENSQMKVLDLSWNHLRRKGALAVAEGIRD- 312

Query: 527 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           N  +T +DL++N   DDGA AI +ALK+N+ + V  L+++NN ++  G
Sbjct: 313 NITITHLDLSWNGFGDDGAQAIGEALKSNKTLEV--LDMSNNRISTEG 358



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 91/185 (49%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + + E  ++      V +SG  FGD+    +AE++  NQ  EE+  + N    
Sbjct: 213 KIGNEGSEPIAEMLQDNSTLERVVLSGNGFGDKAAEAMAEAIMSNQKMEEMDLSHNEFGE 272

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
              +     +  N  +K L+LS N +  +G   + + + DN  +  L LS     D+GA+
Sbjct: 273 VSGELLGPAIAENSQMKVLDLSWNHLRRKGALAVAEGIRDNITITHLDLSWNGFGDDGAQ 332

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AI E LK+N  L VL+++NN I   G   LA+ L+EN  +R L +  N   + G   + K
Sbjct: 333 AIGEALKSNKTLEVLDMSNNRISTEGAVLLAKGLIENDALRVLKMGKNPMQSAGCYGVLK 392

Query: 325 GLEGN 329
           G+  N
Sbjct: 393 GISQN 397



 Score = 38.9 bits (89), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 61/204 (29%)

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
           S   R ++D+ ++    + ++ +G  GAKA++  L  +  I  L L    + A G +++A
Sbjct: 140 SYFLRHMQDSELV----MMHHGLGPLGAKAIATSLVTNTTILKLNLRDNWLEAQGGKYIA 195

Query: 493 DMLRYNNTISILDLRANGLRDEGAKCLAQSF-------KVV------------------- 526
           +ML  N  I  LDL  N + +EG++ +A+         +VV                   
Sbjct: 196 EMLVENCYIHDLDLSYNKIGNEGSEPIAEMLQDNSTLERVVLSGNGFGDKAAEAMAEAIM 255

Query: 527 -NEALTSIDLAFNE----------------------------IRDDGAFAIAQALKANED 557
            N+ +  +DL+ NE                            +R  GA A+A+ ++ N  
Sbjct: 256 SNQKMEEMDLSHNEFGEVSGELLGPAIAENSQMKVLDLSWNHLRRKGALAVAEGIRDN-- 313

Query: 558 VAVTSLNLANNFLTKFGQSALTDA 581
           + +T L+L+ N     G  A+ +A
Sbjct: 314 ITITHLDLSWNGFGDDGAQAIGEA 337


>gi|71418232|ref|XP_810784.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70875372|gb|EAN88933.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 449

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 186/363 (51%), Gaps = 7/363 (1%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +++ ++ ++L  N +G E  + +  +L +++ V  + L   D+  EG  A+A ++  ++ 
Sbjct: 60  ADVPVRVVDLIDNQLGPEQTQKIASML-ESSTVRDVLLRYNDIGKEGCDALANVVNVSTK 118

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L++L++  N +  +    L +++  ++ +  L L+ N  G  GA  L + LE N  L+ L
Sbjct: 119 LQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNVYLKSL 178

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N IG  G  ++   L+     L  L +  N +   G   +A+ +K  K L  + L 
Sbjct: 179 DLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGIALIADAVKGNKCLKDLTLG 238

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNP 454
            N+  D  AE +AD L++N T+ T+DL  N + + G   +AR  L +N  + SL L+ NP
Sbjct: 239 NNNATDAAAEALADMLRENSTLETLDLRSNTLTATGVRILARDGLANNIFLVSLSLSANP 298

Query: 455 IGADGAKALSEVLKFH--GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           IG+ GA  +++ L  H  G +  L L  C++G +G   +A ++    T++ ++L  N L 
Sbjct: 299 IGSVGADEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLD 358

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           +E A  L++S        + +DL+ NEI + GA  +  A + N    ++SL L  N + +
Sbjct: 359 NEAAVVLSRSIVNSISI-SIVDLSANEIGEWGASNLIDATQLN--ARISSLLLHGNNINR 415

Query: 573 FGQ 575
             Q
Sbjct: 416 IVQ 418



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 149/309 (48%), Gaps = 3/309 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G EG   LA  +  +   + +    NG+TAA ++     +  + AL  L LS N IG 
Sbjct: 100 DIGKEGCDALANVVNVSTKLQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGH 159

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLELNNNMIDYSGF 291
           EG   L   L  N  ++ L LS  ++   GA++IA LL    S L+ L+L  N +  +G 
Sbjct: 160 EGAALLFRALEKNVYLKSLDLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGI 219

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             +A+A+  N  ++ L L  N      A ALA  L  N +L  L L  N++   G+R L 
Sbjct: 220 ALIADAVKGNKCLKDLTLGNNNATDAAAEALADMLRENSTLETLDLRSNTLTATGVRILA 279

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMNDIGDEGAEKIAD 409
               +    L  L +  N I + GA  +A+   +    +L  ++L   ++G  G  +IA 
Sbjct: 280 RDGLANNIFLVSLSLSANPIGSVGADEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIAS 339

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            +    T+  ++L GN + ++ A  ++R + ++  I+ +DL+ N IG  GA  L +  + 
Sbjct: 340 LIAATITLNEVNLSGNQLDNEAAVVLSRSIVNSISISIVDLSANEIGEWGASNLIDATQL 399

Query: 470 HGNINTLKL 478
           +  I++L L
Sbjct: 400 NARISSLLL 408



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 167/349 (47%), Gaps = 6/349 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+     G E    +A S+  + T  +V    N I   G  A   V+  +  L+ L++ 
Sbjct: 67  VDLIDNQLGPEQTQKIA-SMLESSTVRDVLLRYNDIGKEGCDALANVVNVSTKLQLLDIR 125

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +    V+ L   +  +  + RL LS+  +  EGA  +   L+ N  L+ L+L+ N I
Sbjct: 126 GNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNVYLKSLDLSLNEI 185

Query: 287 DYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
             SG  S+A  L L  S +++L L GN+ G  G   +A  ++GNK L++L L GN+   +
Sbjct: 186 GPSGAESIAHLLALPASPLKTLQLYGNHLGVAGIALIADAVKGNKCLKDLTL-GNNNATD 244

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGA 404
                ++ +      L  LD+ +N+++A G   +A + + N   L+ ++L  N IG  GA
Sbjct: 245 AAAEALADMLRENSTLETLDLRSNTLTATGVRILARDGLANNIFLVSLSLSANPIGSVGA 304

Query: 405 EKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           ++IA  L   Q   +T +DL    +   G   IA ++     +  ++L+ N +  + A  
Sbjct: 305 DEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVV 364

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           LS  +    +I+ + L   +IG  GA  + D  + N  IS L L  N +
Sbjct: 365 LSRSIVNSISISIVDLSANEIGEWGASNLIDATQLNARISSLLLHGNNI 413


>gi|66821673|ref|XP_644281.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
 gi|60472031|gb|EAL69984.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
          Length = 880

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 216/497 (43%), Gaps = 36/497 (7%)

Query: 86  KQIASFVVPAGVFVSATFVLWKLVEKLLMPK--PSRPSKPTAEGMNWSVGAGTNLLSGFT 143
           K+   + V   +  S+TF  +  V K  MP   P +  K T + +         L + F+
Sbjct: 376 KKFKFYYVAMHIDKSSTFQKFMNVVKHTMPDRVPEKFMKATTKPI---------LSNSFS 426

Query: 144 GKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
             LF +      E A  +  F       +    E    +  +L  N +   +SF    + 
Sbjct: 427 KNLFTQ----FFEVANSMTYFR---FYQKWISPENFMAIGNALRINTSITHLSFRHGNLD 479

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD-----L 258
              I A    L  N  +++++  GN +G+     L  ++  N    +  L ++D     +
Sbjct: 480 DDSIDAVINALSENTTIESIDFRGNKLGNATAIKLAQLMSTN----KTSLKTIDFFYNHI 535

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGA 316
             EG  A+A  +K N+ L  L L  N I+      L  +L  NST++S+HL+   +  GA
Sbjct: 536 APEGGIALARAMKTNNKLERLYLRLNYINGQTAIMLGNSLAHNSTLKSVHLDHIDDQSGA 595

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
           +   +L K       L EL+L    +       +   LS +   L  ++  +N +     
Sbjct: 596 VFFESLGKS--TTTVLNELNLSNCQLESASASEISKTLSKKTSTLVDINFKSNKLGV-SL 652

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGD-EGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
             +A  ++   ++  +NL  N I D  G  ++ADAL  N+TIT + L  N++ +  A  I
Sbjct: 653 ISIARALEVNSTITRLNLSDNRIFDTSGGWELADALSNNKTITALSLSTNSLGNGFAEGI 712

Query: 436 ARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           AR L  ++  + SLD++ N I   GAK ++E L  +  +  L +   ++     + +AD 
Sbjct: 713 ARALNSSTCSLKSLDISGNQIDYAGAKYIAEALSNNKTLKLLNMSQNKLSPQFGQLIADS 772

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L+ N ++  L+L    L D+G+  +A         L  +++  NEI D      A++L  
Sbjct: 773 LKVNRSLIHLELSYTSLGDKGSLPIASLLANDGTHLIRLNMNENEINDKVGIIFAESLAT 832

Query: 555 NEDVAVTSLNLANNFLT 571
           N  + V  L+L+ N LT
Sbjct: 833 NTHIQV--LDLSFNKLT 847



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 162/369 (43%), Gaps = 33/369 (8%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S+D  G   G+     LA+ +  N+T+ + + F  N I   G  A    +++N  L+ L 
Sbjct: 498 SIDFRGNKLGNATAIKLAQLMSTNKTSLKTIDFFYNHIAPEGGIALARAMKTNNKLERLY 557

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD--------------------------- 257
           L  N I  +    L + L  N+ ++ + L  +D                           
Sbjct: 558 LRLNYINGQTAIMLGNSLAHNSTLKSVHLDHIDDQSGAVFFESLGKSTTTVLNELNLSNC 617

Query: 258 -LRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN-YG 314
            L    A  I++ L K  S L  +   +N +  S   S+A AL  NSTI  L+L+ N   
Sbjct: 618 QLESASASEISKTLSKKTSTLVDINFKSNKLGVS-LISIARALEVNSTITRLNLSDNRIF 676

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
              G   LA  L  NK++  L L  NS+G+     +   L+S    L  LDI  N I   
Sbjct: 677 DTSGGWELADALSNNKTITALSLSTNSLGNGFAEGIARALNSSTCSLKSLDISGNQIDYA 736

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA ++AE + N K+L  +N+  N +  +  + IAD+LK NR++  ++L   ++  KG+  
Sbjct: 737 GAKYIAEALSNNKTLKLLNMSQNKLSPQFGQLIADSLKVNRSLIHLELSYTSLGDKGSLP 796

Query: 435 IARVL-KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           IA +L  D + +  L++  N I        +E L  + +I  L L + ++     E    
Sbjct: 797 IASLLANDGTHLIRLNMNENEINDKVGIIFAESLATNTHIQVLDLSFNKLTYRSKEVFER 856

Query: 494 MLRYNNTIS 502
            L+ N +I+
Sbjct: 857 SLKTNLSIT 865



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 3/232 (1%)

Query: 191 TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD-EGVKCLCDILVDNAGVE 249
           T  +++F +N +  + I +    L+ N  +  LNLS N I D  G   L D L +N  + 
Sbjct: 637 TLVDINFKSNKLGVSLI-SIARALEVNSTITRLNLSDNRIFDTSGGWELADALSNNKTIT 695

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
            L LS+  L +  A+ IA  L +++  L+ L+++ N IDY+G   +AEAL  N T++ L+
Sbjct: 696 ALSLSTNSLGNGFAEGIARALNSSTCSLKSLDISGNQIDYAGAKYIAEALSNNKTLKLLN 755

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           ++ N         +A  L+ N+SL  L L   S+GD+G   + S L++    L  L++  
Sbjct: 756 MSQNKLSPQFGQLIADSLKVNRSLIHLELSYTSLGDKGSLPIASLLANDGTHLIRLNMNE 815

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           N I+ K     AE +     +  ++L  N +     E    +LK N +IT I
Sbjct: 816 NEINDKVGIIFAESLATNTHIQVLDLSFNKLTYRSKEVFERSLKTNLSITNI 867


>gi|189027074|ref|NP_001121103.1| NACHT, LRR and PYD domains-containing protein 5 [Macaca mulatta]
 gi|164709497|gb|ABY67443.1| NLR family pyrin domain-containing protein 5 [Macaca mulatta]
          Length = 1199

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 169/389 (43%), Gaps = 35/389 (8%)

Query: 225  LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNN 283
            + G  + ++  +  C +L  +  + +L L S  L +   K +   L++ +  ++ L+  N
Sbjct: 759  MRGKTLMEDQWEDFCSVLSTHPNLRQLDLGSSILTERAMKTLCAKLRHPTCKIQTLKFRN 818

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK------------- 330
              I  SG   L   L+ N  +RSL+L G +          + L+  K             
Sbjct: 819  AQI-ASGLQHLWRTLIANRNLRSLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDRCGL 877

Query: 331  ----------------SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
                            SL+ L L GN + D+G+  L   L   +  L  L + +  I A 
Sbjct: 878  THACYLKISQILTTSPSLKSLSLAGNEVTDQGVTPLSDALRVSQCALQKLTLEDCGIMAT 937

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGAS 433
            G   +A  + + +SL  + L  ND+G+EG   +  +++  + ++  + L   N+H+ G  
Sbjct: 938  GCQSLASALVSNRSLTHLCLSNNDLGNEGVNLLCRSMRLPHCSLRRLMLNRCNLHTAGCG 997

Query: 434  AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVA 492
             +A  L  N+ +T L L+ NP+  +G K L EV++    ++  L+L  C + A+  E ++
Sbjct: 998  FLALALMGNAWLTHLSLSVNPVEDNGMKLLCEVMREPSCHLQDLELVKCHLTAACCESLS 1057

Query: 493  DMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
             ++  +  +  LDL  N L D G   L +  K     LT + L    +  D   A++ AL
Sbjct: 1058 CVISRSRHLKSLDLTDNALGDGGVAALCEGLKQKKSVLTRLGLKACGLTSDCCEALSLAL 1117

Query: 553  KANEDVAVTSLNLANNFLTKFGQSALTDA 581
              N    +TSLNL  N  +  G   L  A
Sbjct: 1118 SCNRH--LTSLNLVQNNFSPEGMMKLCSA 1144



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 4/307 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R   S+++ G +  +E +    E+L + +   E +     G+T A       +L ++ +L
Sbjct: 836  RNLRSLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDRCGLTHACYLKISQILTTSPSL 895

Query: 221  KTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            K+L+L+GN + D+GV  L D L V    +++L L    +   G +++A  L +N  L  L
Sbjct: 896  KSLSLAGNEVTDQGVTPLSDALRVSQCALQKLTLEDCGIMATGCQSLASALVSNRSLTHL 955

Query: 280  ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
             L+NN +   G   L  ++ L + ++R L LN       G   LA  L GN  L  L L 
Sbjct: 956  CLSNNDLGNEGVNLLCRSMRLPHCSLRRLMLNRCNLHTAGCGFLALALMGNAWLTHLSLS 1015

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N + D G++ L   +      L  L++    ++A     ++  I   + L  ++L  N 
Sbjct: 1016 VNPVEDNGMKLLCEVMREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSLDLTDNA 1075

Query: 399  IGDEGAEKIADALKQNRTI-TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            +GD G   + + LKQ +++ T + L    + S    A++  L  N  +TSL+L  N    
Sbjct: 1076 LGDGGVAALCEGLKQKKSVLTRLGLKACGLTSDCCEALSLALSCNRHLTSLNLVQNNFSP 1135

Query: 458  DGAKALS 464
            +G   L 
Sbjct: 1136 EGMMKLC 1142



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 153/340 (45%), Gaps = 4/340 (1%)

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDL 258
            N   A+G++     L +N  L++LNL G  + +E V+  C+ L      +E L+L    L
Sbjct: 818  NAQIASGLQHLWRTLIANRNLRSLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDRCGL 877

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGAL 317
                   I+++L  +  L+ L L  N +   G T L++AL +    ++ L L      A 
Sbjct: 878  THACYLKISQILTTSPSLKSLSLAGNEVTDQGVTPLSDALRVSQCALQKLTLEDCGIMAT 937

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            G  +LA  L  N+SL  L L  N +G+EG+  L   +      L  L +   ++   G  
Sbjct: 938  GCQSLASALVSNRSLTHLCLSNNDLGNEGVNLLCRSMRLPHCSLRRLMLNRCNLHTAGCG 997

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIA 436
             +A  +     L  ++L +N + D G + + + +++    +  ++L   ++ +    +++
Sbjct: 998  FLALALMGNAWLTHLSLSVNPVEDNGMKLLCEVMREPSCHLQDLELVKCHLTAACCESLS 1057

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT-LKLGWCQIGASGAEFVADML 495
             V+  +  + SLDL  N +G  G  AL E LK   ++ T L L  C + +   E ++  L
Sbjct: 1058 CVISRSRHLKSLDLTDNALGDGGVAALCEGLKQKKSVLTRLGLKACGLTSDCCEALSLAL 1117

Query: 496  RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
              N  ++ L+L  N    EG   L  +F      L  I L
Sbjct: 1118 SCNRHLTSLNLVQNNFSPEGMMKLCSAFACPTSNLQIIGL 1157


>gi|320169040|gb|EFW45939.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 561

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 101/169 (59%), Gaps = 3/169 (1%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N I    A AIA  LK N+ +T L L  N IG  GA+A+++ LK +  + +L LG  
Sbjct: 21  LQQNQIGDAEARAIAETLKVNTTLTKLYLDNNQIGDAGAQAIAKTLKVNTTLTSLSLGGN 80

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           QIG +GA  +A+ L+ N T+++L L  N + D GA+ + ++ KV N  LT + L  N++ 
Sbjct: 81  QIGDAGARAIAEALKVNTTLTVLYLDVNQIGDTGAQAMTEALKV-NTTLTELYLDSNQMT 139

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
           D G  AIA+ALK N+   +TSL L+ NFLT  G +AL +  + V ++ +
Sbjct: 140 DVGGQAIAEALKVNK--TLTSLYLSQNFLTNTGITALNETGNTVCKLED 186



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 94/157 (59%), Gaps = 1/157 (0%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L  N IGD  A  IA+ LK N T+T + L  N I   GA AIA+ LK N+ +TSL L 
Sbjct: 19  LGLQQNQIGDAEARAIAETLKVNTTLTKLYLDNNQIGDAGAQAIAKTLKVNTTLTSLSLG 78

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA+A++E LK +  +  L L   QIG +GA+ + + L+ N T++ L L +N +
Sbjct: 79  GNQIGDAGARAIAEALKVNTTLTVLYLDVNQIGDTGAQAMTEALKVNTTLTELYLDSNQM 138

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
            D G + +A++ K VN+ LTS+ L+ N + + G  A+
Sbjct: 139 TDVGGQAIAEALK-VNKTLTSLYLSQNFLTNTGITAL 174



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 88/163 (53%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +  N I    A  +AE +K   +L  + L  N IGD GA+ IA  LK N T+T++ LG
Sbjct: 19  LGLQQNQIGDAEARAIAETLKVNTTLTKLYLDNNQIGDAGAQAIAKTLKVNTTLTSLSLG 78

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I   GA AIA  LK N+ +T L L  N IG  GA+A++E LK +  +  L L   Q+
Sbjct: 79  GNQIGDAGARAIAEALKVNTTLTVLYLDVNQIGDTGAQAMTEALKVNTTLTELYLDSNQM 138

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
              G + +A+ L+ N T++ L L  N L + G   L ++   V
Sbjct: 139 TDVGGQAIAEALKVNKTLTSLYLSQNFLTNTGITALNETGNTV 181



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 91/188 (48%), Gaps = 29/188 (15%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L  N I  +   ++AE L  N+T+  L+L+ N  G  GA A+AK L+ N +L  L L 
Sbjct: 19  LGLQQNQIGDAEARAIAETLKVNTTLTKLYLDNNQIGDAGAQAIAKTLKVNTTLTSLSLG 78

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           GN IGD G RA                             +AE +K   +L  + L +N 
Sbjct: 79  GNQIGDAGARA-----------------------------IAEALKVNTTLTVLYLDVNQ 109

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD GA+ + +ALK N T+T + L  N +   G  AIA  LK N  +TSL L+ N +   
Sbjct: 110 IGDTGAQAMTEALKVNTTLTELYLDSNQMTDVGGQAIAEALKVNKTLTSLYLSQNFLTNT 169

Query: 459 GAKALSEV 466
           G  AL+E 
Sbjct: 170 GITALNET 177



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 83/157 (52%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E+    N I  A  +A    L+ N  L  L L  N IGD G + +   L  N  +  L L
Sbjct: 18  ELGLQQNQIGDAEARAIAETLKVNTTLTKLYLDNNQIGDAGAQAIAKTLKVNTTLTSLSL 77

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               + D GA+AIAE LK N+ L VL L+ N I  +G  ++ EAL  N+T+  L+L+ N 
Sbjct: 78  GGNQIGDAGARAIAEALKVNTTLTVLYLDVNQIGDTGAQAMTEALKVNTTLTELYLDSNQ 137

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              +G  A+A+ L+ NK+L  L+L  N + + GI AL
Sbjct: 138 MTDVGGQAIAEALKVNKTLTSLYLSQNFLTNTGITAL 174



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 1/145 (0%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL L  N IGD   RA+   L      L  L + NN I   GA  +A+ +K   +L  ++
Sbjct: 18  ELGLQQNQIGDAEARAIAETLKVNT-TLTKLYLDNNQIGDAGAQAIAKTLKVNTTLTSLS 76

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N IGD GA  IA+ALK N T+T + L  N I   GA A+   LK N+ +T L L  N
Sbjct: 77  LGGNQIGDAGARAIAEALKVNTTLTVLYLDVNQIGDTGAQAMTEALKVNTTLTELYLDSN 136

Query: 454 PIGADGAKALSEVLKFHGNINTLKL 478
            +   G +A++E LK +  + +L L
Sbjct: 137 QMTDVGGQAIAEALKVNKTLTSLYL 161



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 75/136 (55%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L  N IGD   + + + L  N  + +L L +  + D GA+AIA+ LK N+ L  L L 
Sbjct: 19  LGLQQNQIGDAEARAIAETLKVNTTLTKLYLDNNQIGDAGAQAIAKTLKVNTTLTSLSLG 78

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  ++AEAL  N+T+  L+L+ N  G  GA A+ + L+ N +L EL+L  N +
Sbjct: 79  GNQIGDAGARAIAEALKVNTTLTVLYLDVNQIGDTGAQAMTEALKVNTTLTELYLDSNQM 138

Query: 343 GDEGIRALMSGLSSRK 358
            D G +A+   L   K
Sbjct: 139 TDVGGQAIAEALKVNK 154



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 62/128 (48%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +     GD G   +A++L  N T   +S   N I  AG +A    L+ N  L  L L  N
Sbjct: 49  LDNNQIGDAGAQAIAKTLKVNTTLTSLSLGGNQIGDAGARAIAEALKVNTTLTVLYLDVN 108

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + + L  N  +  L L S  + D G +AIAE LK N  L  L L+ N +  
Sbjct: 109 QIGDTGAQAMTEALKVNTTLTELYLDSNQMTDVGGQAIAEALKVNKTLTSLYLSQNFLTN 168

Query: 289 SGFTSLAE 296
           +G T+L E
Sbjct: 169 TGITALNE 176


>gi|440800840|gb|ELR21872.1| leucine rich repeat containing protein, partial [Acanthamoeba
           castellanii str. Neff]
          Length = 375

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 163/311 (52%), Gaps = 16/311 (5%)

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           + + V ++ L    L  EGA+ I E L+N++  R + L  + I   G  ++ +ALL+N +
Sbjct: 37  NQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARAVGQALLKNRS 96

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           ++++ L  N  G  GA  +A+ +E N  +    L  N IG  G++A++S L + +  +  
Sbjct: 97  LKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALRTNQ-SVKT 155

Query: 364 LDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYM--NDIGDEGAEKIADALKQNRTITTI 420
           LD+  N++  +GA  + E ++     L  I+LY+  N+ G +GA  IA  +++N TI  +
Sbjct: 156 LDLVQNNLGVEGARLLEEAFVDAAHPLSIISLYLSGNEFGVDGARHIAGIIRRNTTIKHL 215

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            LG NN+  +G   IA  LK+N  + +L +  N +G   A   ++ L+ +  +  L LG+
Sbjct: 216 YLGLNNLGEEGGLLIAEALKENKTLLTLAVLSNELGPRAAATFADALRLNNTLTCLDLGY 275

Query: 481 CQ-----------IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
            +           I  +GA+ +A  +  N ++ +L+L  NG+ + G   +A++ +  N +
Sbjct: 276 AKATKALEGKPNVIEDAGAQAIAAAVAENTSLRVLNLTQNGIGEAGYLAVAEALR-TNTS 334

Query: 530 LTSIDLAFNEI 540
           LT + L  N +
Sbjct: 335 LTHLVLDRNRM 345



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 160/343 (46%), Gaps = 47/343 (13%)

Query: 154 LNEFAKELRAFSS----VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA 209
           L+ + + LRA  S    VD+  +  G EG   + E+L  + TA  V   A+ I   G +A
Sbjct: 27  LDWYVQRLRANQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARA 86

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
               L  N +LKT+ L  N IG+E                            GAK IAE 
Sbjct: 87  VGQALLKNRSLKTVFLGCNGIGEE----------------------------GAKYIAEA 118

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           ++NN ++    L  N I  +G  ++  AL  N ++++L L  N  G  GA  L +     
Sbjct: 119 IENNDVVEGYWLKRNQIGLTGLQAILSALRTNQSVKTLDLVQNNLGVEGARLLEEAFVDA 178

Query: 330 K---SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
               S+  L+L GN  G +G R + +G+  R   +  L +G N++  +G   +AE +K  
Sbjct: 179 AHPLSIISLYLSGNEFGVDGARHI-AGIIRRNTTIKHLYLGLNNLGEEGGLLIAEALKEN 237

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG-----------GNNIHSKGASAI 435
           K+LL + +  N++G   A   ADAL+ N T+T +DLG            N I   GA AI
Sbjct: 238 KTLLTLAVLSNELGPRAAATFADALRLNNTLTCLDLGYAKATKALEGKPNVIEDAGAQAI 297

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           A  + +N+ +  L+L  N IG  G  A++E L+ + ++  L L
Sbjct: 298 AAAVAENTSLRVLNLTQNGIGEAGYLAVAEALRTNTSLTHLVL 340



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 2/193 (1%)

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
           ++V     N  +++ ++L    +G EGA +I +AL+ + T  ++ LG + I  +GA A+ 
Sbjct: 29  WYVQRLRANQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARAVG 88

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           + L  N  + ++ L  N IG +GAK ++E ++ +  +    L   QIG +G + +   LR
Sbjct: 89  QALLKNRSLKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALR 148

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF--NEIRDDGAFAIAQALKA 554
            N ++  LDL  N L  EGA+ L ++F      L+ I L    NE   DGA  IA  ++ 
Sbjct: 149 TNQSVKTLDLVQNNLGVEGARLLEEAFVDAAHPLSIISLYLSGNEFGVDGARHIAGIIRR 208

Query: 555 NEDVAVTSLNLAN 567
           N  +    L L N
Sbjct: 209 NTTIKHLYLGLNN 221



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 32/244 (13%)

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L + +  +  +D+    +  +GA  + E ++N  +   + L  ++IG EGA  +  AL +
Sbjct: 34  LRANQSNVVKVDLCKQMLGPEGAREIMEALENSTTARSVLLGADEIGPEGARAVGQALLK 93

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSV----------------------------I 445
           NR++ T+ LG N I  +GA  IA  +++N V                            +
Sbjct: 94  NRSLKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALRTNQSV 153

Query: 446 TSLDLAYNPIGADGAKALSE--VLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +LDL  N +G +GA+ L E  V   H  +I +L L   + G  GA  +A ++R N TI 
Sbjct: 154 KTLDLVQNNLGVEGARLLEEAFVDAAHPLSIISLYLSGNEFGVDGARHIAGIIRRNTTIK 213

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N L +EG   +A++ K  N+ L ++ +  NE+    A   A AL+ N  +    
Sbjct: 214 HLYLGLNNLGEEGGLLIAEALK-ENKTLLTLAVLSNELGPRAAATFADALRLNNTLTCLD 272

Query: 563 LNLA 566
           L  A
Sbjct: 273 LGYA 276



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 125/271 (46%), Gaps = 21/271 (7%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R+  +V +     G+EG  ++AE++  N   E      N I   G++A    L++N ++K
Sbjct: 95  RSLKTVFLGCNGIGEEGAKYIAEAIENNDVVEGYWLKRNQIGLTGLQAILSALRTNQSVK 154

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNA---GVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           TL+L  N +G EG + L +  VD A    +  L LS  +   +GA+ IA +++ N+ ++ 
Sbjct: 155 TLDLVQNNLGVEGARLLEEAFVDAAHPLSIISLYLSGNEFGVDGARHIAGIIRRNTTIKH 214

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L  N +   G   +AEAL EN T+ +L +  N  G   A   A  L  N +L  L L 
Sbjct: 215 LYLGLNNLGEEGGLLIAEALKENKTLLTLAVLSNELGPRAAATFADALRLNNTLTCLDL- 273

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
                  G       L  +           N I   GA  +A  +    SL  +NL  N 
Sbjct: 274 -------GYAKATKALEGKP----------NVIEDAGAQAIAAAVAENTSLRVLNLTQNG 316

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
           IG+ G   +A+AL+ N ++T + L  N + +
Sbjct: 317 IGEAGYLAVAEALRTNTSLTHLVLDRNRMPT 347


>gi|426377571|ref|XP_004055536.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Gorilla gorilla gorilla]
          Length = 488

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 128/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 104 NMKESYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    N S+I SL L+GN      A  L + L  N  +++L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 223

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G + L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 224 DLSHNQFSDVGGKHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 282

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 283 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 456 GADGA 460
             DGA
Sbjct: 343 NMDGA 347



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 134/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 168

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  ++ A  +  AL  N  I  +DL  N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 228

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 229 QFSDVGGKHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 288

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
             A  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 289 EVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLES-NESLRVLKLFLNPINMDGA 347

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  A+K N    +  L+++N  +++
Sbjct: 348 ILLILAIKRNPKSRMEELDISNVLVSE 374



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 126/264 (47%), Gaps = 30/264 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S  G  H+ 
Sbjct: 181 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFSDVGGKHLG 239

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           +       +L IN+                      +T++DL  NN H++GA A+   L+
Sbjct: 240 Q-------MLAINV---------------------GLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 272 GNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNES 331

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           + +L L  N +  +GA  L  + K
Sbjct: 332 LRVLKLFLNPINMDGAILLILAIK 355



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 228 NQFSDVGGKHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G K L  +L  N G+  L LS  +    GA 
Sbjct: 205 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGKHLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375


>gi|402908492|ref|XP_003916973.1| PREDICTED: protein NLRC5 [Papio anubis]
          Length = 1866

 Score =  104 bits (259), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 14/346 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1497 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1556

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L + +++ S  T L   L   + ++SL L  N  G +G   L++ L    SL EL L  N
Sbjct: 1557 LGHLLLNSSALTLLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS  G   +AE +  C+ L  + L  N +G
Sbjct: 1617 QIGDAGVQHLATILPGLP-ELRKIDLSVNSISPAGGMQLAESLILCRHLEELMLGCNALG 1675

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++ + L  +  +  + LA N +     
Sbjct: 1676 DPTALGLARELPQH--LRVLHLPFSHLGPGGALSLTQALDGSPHLEEISLAENNLAGG-- 1731

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                 VL+F   +  L+   L  C+I     + +         + ++ L  N L DE A 
Sbjct: 1732 -----VLRFCKELPLLRQIDLVSCKIDNQTVKLLTSSFTRCPALEVILLSWNLLGDEAAA 1786

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
             LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1787 ELAQVLPQMGR-LKRVDLEKNQITAFGAWLLAEGLAQGSSIQVIRL 1831



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 93/341 (27%), Positives = 135/341 (39%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK--------------- 221
            EGL  LA  LG+    EE+  + N     G KA    L+    LK               
Sbjct: 1509 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALT 1568

Query: 222  -------------TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                         +L L  N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1569 LLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL---------------LENST---------- 303
            +L     LR ++L+ N I  +G   LAE+L               L + T          
Sbjct: 1629 ILPGLPELRKIDLSVNSISPAGGMQLAESLILCRHLEELMLGCNALGDPTALGLARELPQ 1688

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +L + L+G+  L E+ L  N++    +R        R+  L 
Sbjct: 1689 HLRVLHLPFSHLGPGGALSLTQALDGSPHLEEISLAENNLAGGVLRFCKELPLLRQIDLV 1748

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               I N ++       +      C +L  I L  N +GDE A ++A  L Q   +  +DL
Sbjct: 1749 SCKIDNQTVKL-----LTSSFTRCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDL 1803

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1804 EKNQITAFGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQRL 1844



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 96/363 (26%), Positives = 152/363 (41%), Gaps = 33/363 (9%)

Query: 246  AGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            A +++L LS V+L    D+ +  +  LL + S L+   L ++ +   G   LA  L    
Sbjct: 1463 ARLQQLSLSQVNLCEDNDDSSLLLQNLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCH 1522

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +  L L+ N     G  AL + LEG   L+ L L    +    +  L  GLS    +L 
Sbjct: 1523 HLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALTLLTHGLSHMT-RLQ 1581

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +  NSI   G  H++E ++   SL  ++L  N IGD G + +A  L     +  IDL
Sbjct: 1582 SLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDL 1641

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
              N+I   G   +A  L     +  L L  N +G   A  L+  L  H  +  L L +  
Sbjct: 1642 SVNSISPAGGMQLAESLILCRHLEELMLGCNALGDPTALGLARELPQH--LRVLHLPFSH 1699

Query: 483  IGASGA---------------------EFVADMLRYNNTISIL---DLRANGLRDEGAKC 518
            +G  GA                          +LR+   + +L   DL +  + ++  K 
Sbjct: 1700 LGPGGALSLTQALDGSPHLEEISLAENNLAGGVLRFCKELPLLRQIDLVSCKIDNQTVKL 1759

Query: 519  LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
            L  SF     AL  I L++N + D+ A  +AQ L   +   +  ++L  N +T FG   L
Sbjct: 1760 LTSSFTRC-PALEVILLSWNLLGDEAAAELAQVLP--QMGRLKRVDLEKNQITAFGAWLL 1816

Query: 579  TDA 581
             + 
Sbjct: 1817 AEG 1819



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 5/216 (2%)

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DLG   +
Sbjct: 1503 SSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLL 1562

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG +G
Sbjct: 1563 NSSALTLLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAG 1622

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
             + +A +L     +  +DL  N +   G   LA+S  ++   L  + L  N + D  A  
Sbjct: 1623 VQHLATILPGLPELRKIDLSVNSISPAGGMQLAESL-ILCRHLEELMLGCNALGDPTALG 1681

Query: 548  IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            +A+ L  +  V    L+L  + L   G  +LT A D
Sbjct: 1682 LARELPQHLRV----LHLPFSHLGPGGALSLTQALD 1713



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 28/252 (11%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L G   +  L       GD    AL   L +  G+L +L +  + I+A+G  H+ + +
Sbjct: 680 EALVGCGQIENLSFKSRKCGDAFAEALSRSLPTM-GRLQMLGLAGSKITARGISHLVKAL 738

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
             C  L  ++   N + D+    I + L     +  +DL GN++       +ARV     
Sbjct: 739 PLCPQLEEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSGNSVCVSTLLCLARVAVTCP 798

Query: 444 VITSL-----DLAY----------------NPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            I +L     DL +                +   +DG +  ++         TL+L  CQ
Sbjct: 799 TIRTLQARKADLIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSL-----TLRLQKCQ 853

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +    AE +  +L+    +  +DL  N L DEG + +A++   ++     +DL+ N +  
Sbjct: 854 LQVHDAETLIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLH-ITRKLDLSDNGLSL 912

Query: 543 DGAFAIAQALKA 554
            G   + +A+ A
Sbjct: 913 AGVHCVLRAVSA 924



 Score = 48.5 bits (114), Expect = 0.010,   Method: Composition-based stats.
 Identities = 91/454 (20%), Positives = 182/454 (40%), Gaps = 14/454 (3%)

Query: 142  FTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN 200
            FTG  L +E  ++L     + +  S VD+S    GD GL  L E L     +  +  + N
Sbjct: 1222 FTGCSLSQEHVESLCRLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPISGSLDLSHN 1281

Query: 201  GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
             ++          L S   ++  +++   +G E    +     D AG + L+LS    R 
Sbjct: 1282 SVSQESALYLVETLPSCPRVREASVN---LGSEQSFRIHFSKEDQAG-KTLRLSECSFRP 1337

Query: 261  EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
            E    +A  L  +  L  L L    +D      L   +   + + SL +   +    G  
Sbjct: 1338 EHVSRLATGLSQSLQLTELTLTQCCLDQEQLAILLSLVGRPAGLFSLRVQEPWADRAGIL 1397

Query: 321  ALAK-GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            +L +   + + S+ E+ +  +    +    L         +   L + +  +    +  V
Sbjct: 1398 SLLEVCAQASGSVTEISI--SKTQQQLCVQLEFPRQEENPEAVALRLAHCDLGTHHSLLV 1455

Query: 380  AEYIKNCKSLLWINLYMNDI---GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             + ++ C  L  ++L   ++    D+ +  + + L     + T  L  + + ++G + +A
Sbjct: 1456 GQLMETCARLQQLSLSQVNLCEDNDDSSLLLQNLLLSLSELKTFRLTSSCVSTEGLAHLA 1515

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
              L     +  LDL+ N    +G KAL   L+    +  L LG   + +S    +   L 
Sbjct: 1516 SGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALTLLTHGLS 1575

Query: 497  YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            +   +  L L+ N + D G   L+++ +    +L  +DL+ N+I D G   +A  L    
Sbjct: 1576 HMTRLQSLRLKRNSIGDVGCCHLSEALRAAT-SLEELDLSHNQIGDAGVQHLATILPGLP 1634

Query: 557  DVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
            +  +  ++L+ N ++  G   L ++  L   + E
Sbjct: 1635 E--LRKIDLSVNSISPAGGMQLAESLILCRHLEE 1666



 Score = 47.0 bits (110), Expect = 0.026,   Method: Composition-based stats.
 Identities = 75/324 (23%), Positives = 129/324 (39%), Gaps = 29/324 (8%)

Query: 251  LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL-HL 309
            L  S   L DEGA  +A+LL     L+ L L+ N +       LA      ST++ L HL
Sbjct: 1009 LDFSGNALGDEGATRLAQLLPGLGALQSLNLSENSLSLDAVLGLARCF---STLQWLFHL 1065

Query: 310  NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
            + ++       +    L G+K+ R++   G+S  D    A   G   R+     L +   
Sbjct: 1066 DISF------ESQHILLRGDKTGRDIWTTGSS-PDFPAGAEFLGFR-RRCIPRSLRLSEC 1117

Query: 370  SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
             +      H+   +K C   L + L    + D+  E + D L +   ++ + L    +  
Sbjct: 1118 PLEPPSLTHLCATLKECPGPLELQLSCEFLSDQSLETLLDCLPRLPQLSLLQLSQTGLSP 1177

Query: 430  KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGN-----INTLKLGWCQI 483
            K    +A  L     +  +DL          ++L    L F  N     +   +   C +
Sbjct: 1178 KSPFLLANTLSLCPRVKKVDL----------RSLHHATLHFRSNEEQEGVCCGRFTGCSL 1227

Query: 484  GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
                 E +  +L     +S +DL AN L D G +CL +    V  +  S+DL+ N +  +
Sbjct: 1228 SQEHVESLCRLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPIS-GSLDLSHNSVSQE 1286

Query: 544  GAFAIAQALKANEDVAVTSLNLAN 567
             A  + + L +   V   S+NL +
Sbjct: 1287 SALYLVETLPSCPRVREASVNLGS 1310



 Score = 45.1 bits (105), Expect = 0.11,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 87/224 (38%), Gaps = 19/224 (8%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G      G+  L ++L      EEVSF  N ++   +     VL     L+ L+LSGN
Sbjct: 721 LAGSKITARGISHLVKALPLCPQLEEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSGN 780

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVD---LRDEGAKAIAELLKNNSILRVLELNNNM 285
            +    + CL  + V    +  LQ    D   L     +  AEL       R  +L  + 
Sbjct: 781 SVCVSTLLCLARVAVTCPTIRTLQARKADLIFLLSPPTETTAEL------QRAPDLQESD 834

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G  S +  L        +H          A  L   L+    L E+ L GN + DE
Sbjct: 835 GQRKGAQSRSLTLRLQKCQLQVH---------DAETLIALLQEGPHLEEVDLSGNQLEDE 885

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           G R LM+  +S+      LD+ +N +S  G   V   +  C +L
Sbjct: 886 GCR-LMAEAASQLHITRKLDLSDNGLSLAGVHCVLRAVSACWTL 928



 Score = 39.7 bits (91), Expect = 4.7,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 39/259 (15%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            ++L LS  P+    +  LC  L +  G   LQLS   L D+  + + + L      R+ +
Sbjct: 1110 RSLRLSECPLEPPSLTHLCATLKECPGPLELQLSCEFLSDQSLETLLDCLP-----RLPQ 1164

Query: 281  LNNNMIDYSGFTSLAEALLENS----------TIRSLH---------------LNGNYGG 315
            L+   +  +G +  +  LL N+           +RSLH                 G + G
Sbjct: 1165 LSLLQLSQTGLSPKSPFLLANTLSLCPRVKKVDLRSLHHATLHFRSNEEQEGVCCGRFTG 1224

Query: 316  AL----GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
                     +L + L   K L ++ L  N +GD G+R L+  L         LD+ +NS+
Sbjct: 1225 CSLSQEHVESLCRLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPIS-GSLDLSHNSV 1283

Query: 372  SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
            S + A ++ E + +C  +   ++   ++G E + +I  + K+++   T+ L   +   + 
Sbjct: 1284 SQESALYLVETLPSCPRVREASV---NLGSEQSFRIHFS-KEDQAGKTLRLSECSFRPEH 1339

Query: 432  ASAIARVLKDNSVITSLDL 450
             S +A  L  +  +T L L
Sbjct: 1340 VSRLATGLSQSLQLTELTL 1358


>gi|299115568|emb|CBN75771.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
          Length = 376

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 11/272 (4%)

Query: 195 VSFAANGITAAGIKAFDGVLQS-----NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVE 249
           +S A+N I  AG+ +   +L       +  L +L+L GN IG +G + L + L  NA + 
Sbjct: 66  ISVASNDIGDAGVGSLARLLDDEPPSYSSVLSSLDLRGNSIGSKGCQLLTERLRQNATLT 125

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLH 308
            L LSS  L+ EGA  I+++L +N  +  L ++N  +  +GFT++   L E N+T+R L 
Sbjct: 126 SLDLSSNPLKSEGASYISKMLLDNFTIERLVISNTDMTEAGFTAVLAVLREGNNTVRELS 185

Query: 309 LNGNYGGA---LGANALAKGLEGNK-SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           +      +   + A  +++ LE     LR L L G  IGDEG   L   L+     +  L
Sbjct: 186 IGSQLLRSREEVAACHVSRTLETPPYMLRLLDLSGCGIGDEGAYVLRGALTGHP-TMRTL 244

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           D+  N I   G   +A  +    SL  + L  N IGDEGA      L  ++T+TT+DL  
Sbjct: 245 DLSRNRIGITGGQALASLLVGDSSLSSLFLRANMIGDEGARAFKIVLLHSQTLTTLDLRS 304

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N+IH  G  A+A  ++ N+ +  L +  N  G
Sbjct: 305 NDIHDPGLDALAEGMECNASVERLFVWGNHFG 336



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 151/324 (46%), Gaps = 61/324 (18%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEG 262
           K    V+ S +A++ ++++ N IGD GV  L  +L D        LSS+DLR      +G
Sbjct: 51  KIVGAVISSGLAIRNISVASNDIGDAGVGSLARLLDDEPPSYSSVLSSLDLRGNSIGSKG 110

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA- 321
            + + E L+ N+ L  L+L++N +   G + +++ LL+N TI  L ++       G  A 
Sbjct: 111 CQLLTERLRQNATLTSLDLSSNPLKSEGASYISKMLLDNFTIERLVISNTDMTEAGFTAV 170

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           LA   EGN ++REL     SIG + +R       SR+                 A HV+ 
Sbjct: 171 LAVLREGNNTVREL-----SIGSQLLR-------SRE--------------EVAACHVSR 204

Query: 382 YIKNCKSLL-WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
            ++    +L  ++L    IGDEGA  +  AL  + T+ T+DL  N I   G  A+A +L 
Sbjct: 205 TLETPPYMLRLLDLSGCGIGDEGAYVLRGALTGHPTMRTLDLSRNRIGITGGQALASLLV 264

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            +S ++SL L  N IG +GA+A   VL                             ++ T
Sbjct: 265 GDSSLSSLFLRANMIGDEGARAFKIVLL----------------------------HSQT 296

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           ++ LDLR+N + D G   LA+  +
Sbjct: 297 LTTLDLRSNDIHDPGLDALAEGME 320



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 152/288 (52%), Gaps = 23/288 (7%)

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKS-----LRELHLHGNSIGDEGIRALMSGLSSRK 358
           IR++ +  N  G  G  +LA+ L+         L  L L GNSIG +G + L   L  + 
Sbjct: 63  IRNISVASNDIGDAGVGSLARLLDDEPPSYSSVLSSLDLRGNSIGSKGCQLLTERLR-QN 121

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTI 417
             L  LD+ +N + ++GA ++++ + +  ++  + +   D+ + G   +   L++ N T+
Sbjct: 122 ATLTSLDLSSNPLKSEGASYISKMLLDNFTIERLVISNTDMTEAGFTAVLAVLREGNNTV 181

Query: 418 TTIDLGGNNIHSK---GASAIARVLKDNS-VITSLDLAYNPIGADGAKALSEVLKFHGNI 473
             + +G   + S+    A  ++R L+    ++  LDL+   IG +GA  L   L  H  +
Sbjct: 182 RELSIGSQLLRSREEVAACHVSRTLETPPYMLRLLDLSGCGIGDEGAYVLRGALTGHPTM 241

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV---NEAL 530
            TL L   +IG +G + +A +L  ++++S L LRAN + DEGA+    +FK+V   ++ L
Sbjct: 242 RTLDLSRNRIGITGGQALASLLVGDSSLSSLFLRANMIGDEGAR----AFKIVLLHSQTL 297

Query: 531 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           T++DL  N+I D G  A+A+ ++ N   +V  L +  N    FGQ++L
Sbjct: 298 TTLDLRSNDIHDPGLDALAEGMECN--ASVERLFVWGN---HFGQASL 340



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 107/264 (40%), Gaps = 36/264 (13%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L E  ++    +S+D+S      EG  ++++ L  N T E +  +   +T AG  A  
Sbjct: 112 QLLTERLRQNATLTSLDLSSNPLKSEGASYISKMLLDNFTIERLVISNTDMTEAGFTAVL 171

Query: 212 GVLQSN---------------------------------IALKTLNLSGNPIGDEGVKCL 238
            VL+                                     L+ L+LSG  IGDEG   L
Sbjct: 172 AVLREGNNTVRELSIGSQLLRSREEVAACHVSRTLETPPYMLRLLDLSGCGIGDEGAYVL 231

Query: 239 CDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL 298
              L  +  +  L LS   +   G +A+A LL  +S L  L L  NMI   G  +    L
Sbjct: 232 RGALTGHPTMRTLDLSRNRIGITGGQALASLLVGDSSLSSLFLRANMIGDEGARAFKIVL 291

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           L + T+ +L L  N     G +ALA+G+E N S+  L + GN  G   ++        R 
Sbjct: 292 LHSQTLTTLDLRSNDIHDPGLDALAEGMECNASVERLFVWGNHFGQASLKRFGGLGGGRF 351

Query: 359 GKLAV-LDIGNNSISAKGAFHVAE 381
             + V LD+        G +H AE
Sbjct: 352 ALVGVFLDV--QPFVVDGVYHAAE 373



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 40/218 (18%)

Query: 399 IGDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKD-----NSVITSLDLAY 452
           + DE  EKI  A +     I  I +  N+I   G  ++AR+L D     +SV++SLDL  
Sbjct: 44  VTDEDVEKIVGAVISSGLAIRNISVASNDIGDAGVGSLARLLDDEPPSYSSVLSSLDLRG 103

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL-----DLR 507
           N IG+ G + L+E L+ +  + +L L    + + GA +++ ML  N TI  L     D+ 
Sbjct: 104 NSIGSKGCQLLTERLRQNATLTSLDLSSNPLKSEGASYISKMLLDNFTIERLVISNTDMT 163

Query: 508 ANGL--------------------------RDEGAKC-LAQSFKVVNEALTSIDLAFNEI 540
             G                           R+E A C ++++ +     L  +DL+   I
Sbjct: 164 EAGFTAVLAVLREGNNTVRELSIGSQLLRSREEVAACHVSRTLETPPYMLRLLDLSGCGI 223

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
            D+GA+ +  AL  +    + +L+L+ N +   G  AL
Sbjct: 224 GDEGAYVLRGALTGHP--TMRTLDLSRNRIGITGGQAL 259


>gi|194670841|ref|XP_606462.4| PREDICTED: uncharacterized protein C14orf166B homolog [Bos taurus]
 gi|297479949|ref|XP_002691169.1| PREDICTED: uncharacterized protein C14orf166B homolog [Bos taurus]
 gi|296482882|tpg|DAA24997.1| TPA: ribonuclease inhibitor-like [Bos taurus]
          Length = 582

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 149/288 (51%), Gaps = 9/288 (3%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++  L L  N I +EGI +L+  L      L  +++
Sbjct: 93  INLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCITEEGILSLVEMLQENY-YLQEMNV 151

Query: 367 GNNSISAKGAFHVAEYIKN-CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +N +  +GA  ++E+++N   SL  + L  N+  +E AE    AL  N  I ++DL  N
Sbjct: 152 SDNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               K    + ++L  N  + SLDL++N +   G  AL   L+ + ++  L L     G 
Sbjct: 212 KFCDKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + ++LR N+ ++ LDL +N + ++G   ++++ + +NE+L  + L  N I  DGA
Sbjct: 272 EGAAALGEVLRLNSYLTYLDLSSNNITNDGLSKISRALE-LNESLKVLKLFLNPISMDGA 330

Query: 546 FAIAQALKAN-----EDVAVTSLNLANNFLTKF-GQSALTDAKDLVYE 587
             +  ++K N     ED+ ++++ ++  F+    G  A+    D++Y+
Sbjct: 331 VLLILSIKRNPKSRMEDIDISNVLVSEQFVKILDGVCAIHPQLDVIYK 378



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 28/275 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     ++   +G+   G KA    L SN  + TL L+ N I +EG+  L ++L +N  +
Sbjct: 87  NMEESYINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCITEEGILSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + + +S  DL  EGA+ ++E L+NN+                           S++ SL 
Sbjct: 147 QEMNVSDNDLGLEGARILSEFLQNNT---------------------------SSLFSLQ 179

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+GN      A    + L  N  ++ L L  N   D+    L   L+   G L  LD+  
Sbjct: 180 LSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAGEYLGQMLAINVG-LQSLDLSW 238

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N +  +G   +   +++  SL  ++L MN  G+EGA  + + L+ N  +T +DL  NNI 
Sbjct: 239 NHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLRLNSYLTYLDLSSNNIT 298

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           + G S I+R L+ N  +  L L  NPI  DGA  L
Sbjct: 299 NDGLSKISRALELNESLKVLKLFLNPISMDGAVLL 333



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 5/299 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N T   +  A N IT  GI +   +LQ N  L+ +N
Sbjct: 91  SYINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCITEEGILSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + L + L +N + +  LQLS  + ++E A+   + L NN  ++ L+L++
Sbjct: 151 VSDNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N         L + L  N  ++SL L+ N+    G  AL  GL  N SL++L L  NS G
Sbjct: 211 NKFCDKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+ +N+I+  G   ++  ++  +SL  + L++N I  +G
Sbjct: 271 NEGAAALGEVL-RLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDG 329

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI-TSLDLAYNPIGADGAK 461
           A  +  ++K+N      D+  +N+    +    ++L     I   LD+ Y  + A  AK
Sbjct: 330 AVLLILSIKRNPKSRMEDIDISNVLV--SEQFVKILDGVCAIHPQLDVIYKSVQAPSAK 386



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 5/205 (2%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   +INL  + +G  G + IA AL  N T+ T++L  N I  +G  +
Sbjct: 77  GVVPVSYFIRNMEES-YINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCITEEGILS 135

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVAD 493
           +  +L++N  +  ++++ N +G +GA+ LSE L+ +  ++ +L+L         AE    
Sbjct: 136 LVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQ 195

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L  N  I  LDL  N   D+  + L Q    +N  L S+DL++N +   G  A+   L+
Sbjct: 196 ALSNNYRIKSLDLSHNKFCDKAGEYLGQML-AINVGLQSLDLSWNHLYIRGVVALCNGLR 254

Query: 554 ANEDVAVTSLNLANNFLTKFGQSAL 578
           +N  V++  L+L+ N     G +AL
Sbjct: 255 SN--VSLKKLDLSMNSFGNEGAAAL 277



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 1/162 (0%)

Query: 149 ESKQTLNEFAKE-LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + L+EF +    +  S+ +SG NF +E      ++L  N   + +  + N       
Sbjct: 159 EGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAG 218

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N+ L++L+LS N +   GV  LC+ L  N  +++L LS     +EGA A+ 
Sbjct: 219 EYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALG 278

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           E+L+ NS L  L+L++N I   G + ++ AL  N +++ L L
Sbjct: 279 EVLRLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKL 320


>gi|440804489|gb|ELR25366.1| FERM central domain containing protein [Acanthamoeba castellanii str.
            Neff]
          Length = 1072

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 165/389 (42%), Gaps = 34/389 (8%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            ++S   N ITA   +    +L +   L+ LNL+   +G +G   L  +L  N  +  L +
Sbjct: 649  DLSSNQNAITARHAQYIGQLLGACPVLRVLNLNDCRLGTQGAVDLAAVLTSNLTLHELHV 708

Query: 254  SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
            +S  + D G  A+ + LK N  L      +N +   G   L + L +N  + +L L  N 
Sbjct: 709  ASNQINDRGTAALVKALKGNQALHAFNFADNGLSADGAKLLGDMLEKNPHVTTLALGLNK 768

Query: 314  GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
             G LG N L  G++ N +L                               LD+     +A
Sbjct: 769  FGDLGINHLYHGIKCNTTLLR-----------------------------LDLCRTEFTA 799

Query: 374  KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            K   H+   +    ++  + L  NDIG  G + +   L     +T +DL   NI SK   
Sbjct: 800  KAGKHLLRILTEKPNITCVKLAHNDIGQTGGQMLGAYLTSGSRLTVLDLSYTNIGSKALK 859

Query: 434  AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            AI R L++N  +T+L L+ N     GA AL+E L+ +  +  L L  C +       +  
Sbjct: 860  AIGRGLRENRSVTTLKLSGNEFDKKGAMALAEALEANRTLQHLALARCGLPKPALWVLVQ 919

Query: 494  MLR-YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
             LR  N T+  L+L  N +  E AK +       N +L +++L    +  DG   I   +
Sbjct: 920  ALRSRNTTLQRLNLSHNPMNVEVAKVMGDVL-AYNTSLQTLNLT-GCLSSDGTKEIVTGI 977

Query: 553  KANEDVAVTSLNLANNFLTKFGQSALTDA 581
              N   A+  LNL+   +TK   ++L DA
Sbjct: 978  GVNR--ALVKLNLSGCRMTKVVWTSLADA 1004



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 148/324 (45%), Gaps = 5/324 (1%)

Query: 244 DNAGVERLQLSSVD--LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           +N  ++ L LSS    +    A+ I +LL    +LRVL LN+  +   G   LA  L  N
Sbjct: 641 NNILIQELDLSSNQNAITARHAQYIGQLLGACPVLRVLNLNDCRLGTQGAVDLAAVLTSN 700

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            T+  LH+  N     G  AL K L+GN++L   +   N +  +G + L+  +  +   +
Sbjct: 701 LTLHELHVASNQINDRGTAALVKALKGNQALHAFNFADNGLSADGAK-LLGDMLEKNPHV 759

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +G N     G  H+   IK   +LL ++L   +   +  + +   L +   IT + 
Sbjct: 760 TTLALGLNKFGDLGINHLYHGIKCNTTLLRLDLCRTEFTAKAGKHLLRILTEKPNITCVK 819

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  N+I   G   +   L   S +T LDL+Y  IG+   KA+   L+ + ++ TLKL   
Sbjct: 820 LAHNDIGQTGGQMLGAYLTSGSRLTVLDLSYTNIGSKALKAIGRGLRENRSVTTLKLSGN 879

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           +    GA  +A+ L  N T+  L L   GL       L Q+ +  N  L  ++L+ N + 
Sbjct: 880 EFDKKGAMALAEALEANRTLQHLALARCGLPKPALWVLVQALRSRNTTLQRLNLSHNPMN 939

Query: 542 DDGAFAIAQALKANEDVAVTSLNL 565
            + A  +   L  N   ++ +LNL
Sbjct: 940 VEVAKVMGDVLAYN--TSLQTLNL 961



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 116/239 (48%), Gaps = 16/239 (6%)

Query: 342 IGDEGIRALMSGLSSRKGK---------LAVLDIGNN--SISAKGAFHVAEYIKNCKSLL 390
           +G+   +AL+ GL +   +         +  LD+ +N  +I+A+ A ++ + +  C  L 
Sbjct: 617 VGEFQFKALLKGLEAAAAQAVHAHNNILIQELDLSSNQNAITARHAQYIGQLLGACPVLR 676

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            +NL    +G +GA  +A  L  N T+  + +  N I+ +G +A+ + LK N  + + + 
Sbjct: 677 VLNLNDCRLGTQGAVDLAAVLTSNLTLHELHVASNQINDRGTAALVKALKGNQALHAFNF 736

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           A N + ADGAK L ++L+ + ++ TL LG  + G  G   +   ++ N T+  LDL    
Sbjct: 737 ADNGLSADGAKLLGDMLEKNPHVTTLALGLNKFGDLGINHLYHGIKCNTTLLRLDLCRTE 796

Query: 511 LRDEGAKCLAQSFKVVNEA--LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
              +  K L    +++ E   +T + LA N+I   G   +   L +   + V  L+  N
Sbjct: 797 FTAKAGKHL---LRILTEKPNITCVKLAHNDIGQTGGQMLGAYLTSGSRLTVLDLSYTN 852



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 29/313 (9%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
               + ++     D G   L ++L  NQ     +FA NG++A G K    +L+ N  + TL
Sbjct: 703  LHELHVASNQINDRGTAALVKALKGNQALHAFNFADNGLSADGAKLLGDMLEKNPHVTTL 762

Query: 224  NLSGNPIGD-------EGVKC--------LC-------------DILVDNAGVERLQLSS 255
             L  N  GD        G+KC        LC              IL +   +  ++L+ 
Sbjct: 763  ALGLNKFGDLGINHLYHGIKCNTTLLRLDLCRTEFTAKAGKHLLRILTEKPNITCVKLAH 822

Query: 256  VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             D+   G + +   L + S L VL+L+   I      ++   L EN ++ +L L+GN   
Sbjct: 823  NDIGQTGGQMLGAYLTSGSRLTVLDLSYTNIGSKALKAIGRGLRENRSVTTLKLSGNEFD 882

Query: 316  ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
              GA ALA+ LE N++L+ L L    +    +  L+  L SR   L  L++ +N ++ + 
Sbjct: 883  KKGAMALAEALEANRTLQHLALARCGLPKPALWVLVQALRSRNTTLQRLNLSHNPMNVEV 942

Query: 376  AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
            A  + + +    SL  +NL    +  +G ++I   +  NR +  ++L G  +     +++
Sbjct: 943  AKVMGDVLAYNTSLQTLNL-TGCLSSDGTKEIVTGIGVNRALVKLNLSGCRMTKVVWTSL 1001

Query: 436  ARVLKDNSVITSL 448
            A  +  N  +  L
Sbjct: 1002 ADAILQNRTLERL 1014



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 125/309 (40%), Gaps = 30/309 (9%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G +G   LA  L  N T  E+  A+N I   G  A    L+ N AL   N + N +  +
Sbjct: 685 LGTQGAVDLAAVLTSNLTLHELHVASNQINDRGTAALVKALKGNQALHAFNFADNGLSAD 744

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G K L D+L  N  V  L L      D G   +   +K N+ L  L+L            
Sbjct: 745 GAKLLGDMLEKNPHVTTLALGLNKFGDLGINHLYHGIKCNTTLLRLDLCRTEFTAKAGKH 804

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           L   L E   I  + L  N  G  G   L   L     L  L L   +IG + ++A+  G
Sbjct: 805 LLRILTEKPNITCVKLAHNDIGQTGGQMLGAYLTSGSRLTVLDLSYTNIGSKALKAIGRG 864

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L             N S++                   + L  N+   +GA  +A+AL+ 
Sbjct: 865 LRE-----------NRSVTT------------------LKLSGNEFDKKGAMALAEALEA 895

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKD-NSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           NRT+  + L    +       + + L+  N+ +  L+L++NP+  + AK + +VL ++ +
Sbjct: 896 NRTLQHLALARCGLPKPALWVLVQALRSRNTTLQRLNLSHNPMNVEVAKVMGDVLAYNTS 955

Query: 473 INTLKLGWC 481
           + TL L  C
Sbjct: 956 LQTLNLTGC 964



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 2/150 (1%)

Query: 159  KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS-N 217
            +E R+ +++ +SG  F  +G   LAE+L  N+T + ++ A  G+    +      L+S N
Sbjct: 866  RENRSVTTLKLSGNEFDKKGAMALAEALEANRTLQHLALARCGLPKPALWVLVQALRSRN 925

Query: 218  IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
              L+ LNLS NP+  E  K + D+L  N  ++ L L+   L  +G K I   +  N  L 
Sbjct: 926  TTLQRLNLSHNPMNVEVAKVMGDVLAYNTSLQTLNLTGC-LSSDGTKEIVTGIGVNRALV 984

Query: 278  VLELNNNMIDYSGFTSLAEALLENSTIRSL 307
             L L+   +    +TSLA+A+L+N T+  L
Sbjct: 985  KLNLSGCRMTKVVWTSLADAILQNRTLERL 1014


>gi|344289378|ref|XP_003416420.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2-like [Loxodonta africana]
          Length = 1065

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 132/270 (48%), Gaps = 10/270 (3%)

Query: 294  LAEALLENSTIRSL---HLNGNYGGALGAN--ALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            + E  L    +R L   HL   + G   A   ALA  L+  +    L L  NS+GD G+ 
Sbjct: 774  MQEERLAREAVRGLDVEHLKLTFCGVGPAECAALAFALQHLRQPVALQLDYNSVGDIGVE 833

Query: 349  ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
             L+  L    G    L + +N+IS +G   + E+  + + L  + L+ N + D  A  +A
Sbjct: 834  QLLPCL----GVCKALYLRDNNISDRGICKLIEHALHFEQLQKLALFNNKLTDGCARSMA 889

Query: 409  DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            + L + +    + LG N+I + GA  +A+ L+DN  +  L    N +G  GA+AL+E L 
Sbjct: 890  ELLARKQNFLALRLGNNHITAVGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALAEALS 949

Query: 469  FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
             H ++  L L    IG+ GA+ +A ML  N  +  L L  N L DEG   LA+  K  N 
Sbjct: 950  DHQSLKWLSLVGNSIGSVGAQALARMLEKNMVLEELCLEENHLHDEGVCFLAEGLK-RNS 1008

Query: 529  ALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            +L  + L+ N I   GA A+ Q L+ N  +
Sbjct: 1009 SLKVLKLSNNSITYAGAEALLQTLERNNTI 1038



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 141/274 (51%), Gaps = 4/274 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            VE L+L+   +      A+A  L++      L+L+ N +   G   L   L      ++L
Sbjct: 789  VEHLKLTFCGVGPAECAALAFALQHLRQPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 845

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D   R+ M+ L +RK     L +G
Sbjct: 846  YLRDNNISDRGICKLIEHALHFEQLQKLALFNNKLTDGCARS-MAELLARKQNFLALRLG 904

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +A+ +++  SL ++  + N +GD+GA+ +A+AL  ++++  + L GN+I
Sbjct: 905  NNHITAVGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALAEALSDHQSLKWLSLVGNSI 964

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+AR+L+ N V+  L L  N +  +G   L+E LK + ++  LKL    I  +G
Sbjct: 965  GSVGAQALARMLEKNMVLEELCLEENHLHDEGVCFLAEGLKRNSSLKVLKLSNNSITYAG 1024

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AE +   L  NNTI  + LR N    E  + L+ 
Sbjct: 1025 AEALLQTLERNNTILEVWLRGNTFSPEEIETLSH 1058



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 103/207 (49%), Gaps = 1/207 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A+++AELL        L 
Sbjct: 843  KALYLRDNNISDRGICKLIEHALHFEQLQKLALFNNKLTDGCARSMAELLARKQNFLALR 902

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I   G   LA+ L +N +++ L   GN  G  GA ALA+ L  ++SL+ L L GN
Sbjct: 903  LGNNHITAVGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALAEALSDHQSLKWLSLVGN 962

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            SIG  G +AL   L  +   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 963  SIGSVGAQALARML-EKNMVLEELCLEENHLHDEGVCFLAEGLKRNSSLKVLKLSNNSIT 1021

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNI 427
              GAE +   L++N TI  + L GN  
Sbjct: 1022 YAGAEALLQTLERNNTILEVWLRGNTF 1048



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 86/169 (50%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +AE L   Q    +    N ITA G +     L+ N +L+ L   GN +GD+G + L + 
Sbjct: 888  MAELLARKQNFLALRLGNNHITAVGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALAEA 947

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  ++ L L    +   GA+A+A +L+ N +L  L L  N +   G   LAE L  N
Sbjct: 948  LSDHQSLKWLSLVGNSIGSVGAQALARMLEKNMVLEELCLEENHLHDEGVCFLAEGLKRN 1007

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N     GA AL + LE N ++ E+ L GN+   E I  L
Sbjct: 1008 SSLKVLKLSNNSITYAGAEALLQTLERNNTILEVWLRGNTFSPEEIETL 1056



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 118/238 (49%), Gaps = 4/238 (1%)

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA AL       +L L+ N  G +G   L   L   K+L   +L  N+I D GI  L+ 
Sbjct: 806  ALAFALQHLRQPVALQLDYNSVGDIGVEQLLPCLGVCKAL---YLRDNNISDRGICKLIE 862

Query: 353  GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
              +    +L  L + NN ++   A  +AE +   ++ L + L  N I   GAE +A  L+
Sbjct: 863  H-ALHFEQLQKLALFNNKLTDGCARSMAELLARKQNFLALRLGNNHITAVGAEVLAQGLR 921

Query: 413  QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
             N ++  +   GN +  KGA A+A  L D+  +  L L  N IG+ GA+AL+ +L+ +  
Sbjct: 922  DNCSLQFLGFWGNRVGDKGAQALAEALSDHQSLKWLSLVGNSIGSVGAQALARMLEKNMV 981

Query: 473  INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEAL 530
            +  L L    +   G  F+A+ L+ N+++ +L L  N +   GA+ L Q+ +  N  L
Sbjct: 982  LEELCLEENHLHDEGVCFLAEGLKRNSSLKVLKLSNNSITYAGAEALLQTLERNNTIL 1039



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 88/174 (50%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL     +++ E     + F ++ +   +    G   LA+ L  N + + + F 
Sbjct: 873  LALFNNKLTDGCARSMAELLARKQNFLALRLGNNHITAVGAEVLAQGLRDNCSLQFLGFW 932

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A    L  + +LK L+L GN IG  G + L  +L  N  +E L L    L
Sbjct: 933  GNRVGDKGAQALAEALSDHQSLKWLSLVGNSIGSVGAQALARMLEKNMVLEELCLEENHL 992

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
             DEG   +AE LK NS L+VL+L+NN I Y+G  +L + L  N+TI  + L GN
Sbjct: 993  HDEGVCFLAEGLKRNSSLKVLKLSNNSITYAGAEALLQTLERNNTILEVWLRGN 1046



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 104/236 (44%), Gaps = 29/236 (12%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T    ++   +L        L L  N I  
Sbjct: 851  NISDRGICKLIEHALHFEQLQKLALFNNKLTDGCARSMAELLARKQNFLALRLGNNHITA 910

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L   L DN  ++ L      + D+GA+A+A                         
Sbjct: 911  VGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALA------------------------- 945

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
               EAL ++ +++ L L GN  G++GA ALA+ LE N  L EL L  N + DEG+  L  
Sbjct: 946  ---EALSDHQSLKWLSLVGNSIGSVGAQALARMLEKNMVLEELCLEENHLHDEGVCFLAE 1002

Query: 353  GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            GL  R   L VL + NNSI+  GA  + + ++   ++L + L  N    E  E ++
Sbjct: 1003 GL-KRNSSLKVLKLSNNSITYAGAEALLQTLERNNTILEVWLRGNTFSPEEIETLS 1057


>gi|356500208|ref|XP_003518925.1| PREDICTED: RAN GTPase-activating protein 1-like [Glycine max]
          Length = 533

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 30/288 (10%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F   L+ ++ L+ LNLS N +G++GV+    +L     +E L L +  + +E AKA++EL
Sbjct: 206 FSSALEGSV-LRYLNLSNNAMGEKGVRAFRSLLKSQTSLEELYLMNDGISEEAAKAVSEL 264

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           L +   LRVL  +NNM    G  ++AE +  +  +     +    G+ G  ALA+ L   
Sbjct: 265 LPSTEKLRVLHFHNNMTGDEGAIAIAEIVKHSPALEDFRCSSTRVGSDGGVALAEALGAC 324

Query: 330 KSLRELHLHGNSIG----------------------------DEGIRALMSGLSSRKGKL 361
           K LR+L L  N  G                            D+G  AL + L      L
Sbjct: 325 KHLRKLDLRDNMFGEEAGVALSKVIPAFTDLTEIYLSYLNLEDDGAEALANALKESAPSL 384

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTI 420
            +LD+  N I+AK +  VA  I + + L  +NL  N++ DEGA  I+ AL+     +  +
Sbjct: 385 EILDLAGNDITAKASASVAACISSKQFLTKLNLSENELKDEGAVLISKALEGGHGQLIEV 444

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           DL  N+I   GA  +A  +        L++  N I  +G   L  + K
Sbjct: 445 DLSTNSITWSGAKLVAEAVVGKPGFKLLNINANFISDEGIDELKNIFK 492



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 138/277 (49%), Gaps = 4/277 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S +R L+L+ N  G  G  A    L+   SL EL+L  + I +E  +A+   L S +
Sbjct: 210 LEGSVLRYLNLSNNAMGEKGVRAFRSLLKSQTSLEELYLMNDGISEEAAKAVSELLPSTE 269

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE +K+  +L         +G +G   +A+AL   + + 
Sbjct: 270 -KLRVLHFHNNMTGDEGAIAIAEIVKHSPALEDFRCSSTRVGSDGGVALAEALGACKHLR 328

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +   A+++V+   + +T + L+Y  +  DGA+AL+  LK    ++  L 
Sbjct: 329 KLDLRDNMFGEEAGVALSKVIPAFTDLTEIYLSYLNLEDDGAEALANALKESAPSLEILD 388

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           L    I A  +  VA  +     ++ L+L  N L+DEGA  ++++ +  +  L  +DL+ 
Sbjct: 389 LAGNDITAKASASVAACISSKQFLTKLNLSENELKDEGAVLISKALEGGHGQLIEVDLST 448

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           N I   GA  +A+A+       +  LN+  NF++  G
Sbjct: 449 NSITWSGAKLVAEAVVGKPGFKL--LNINANFISDEG 483



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 32/260 (12%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +  LEG+  LR L+L  N++G++G+RA  S L S+   L  L + N+ IS + A  V+E
Sbjct: 206 FSSALEGS-VLRYLNLSNNAMGEKGVRAFRSLLKSQTS-LEELYLMNDGISEEAAKAVSE 263

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            + + + L  ++ + N  GDEGA                             AIA ++K 
Sbjct: 264 LLPSTEKLRVLHFHNNMTGDEGA----------------------------IAIAEIVKH 295

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           +  +     +   +G+DG  AL+E L    ++  L L     G      ++ ++     +
Sbjct: 296 SPALEDFRCSSTRVGSDGGVALAEALGACKHLRKLDLRDNMFGEEAGVALSKVIPAFTDL 355

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + + L    L D+GA+ LA + K    +L  +DLA N+I    + ++A  + + +   +T
Sbjct: 356 TEIYLSYLNLEDDGAEALANALKESAPSLEILDLAGNDITAKASASVAACISSKQ--FLT 413

Query: 562 SLNLANNFLTKFGQSALTDA 581
            LNL+ N L   G   ++ A
Sbjct: 414 KLNLSENELKDEGAVLISKA 433



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 27/238 (11%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE + ++   E+   ++  + + G  A    L +   L+ L+L  N  G+E 
Sbjct: 282 GDEGAIAIAEIVKHSPALEDFRCSSTRVGSDGGVALAEALGACKHLRKLDLRDNMFGEEA 341

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
              L  ++     +  + LS ++L D+GA+A+A  LK ++                    
Sbjct: 342 GVALSKVIPAFTDLTEIYLSYLNLEDDGAEALANALKESA-------------------- 381

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
                   ++  L L GN   A  + ++A  +   + L +L+L  N + DEG   +   L
Sbjct: 382 -------PSLEILDLAGNDITAKASASVAACISSKQFLTKLNLSENELKDEGAVLISKAL 434

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
               G+L  +D+  NSI+  GA  VAE +        +N+  N I DEG +++ +  K
Sbjct: 435 EGGHGQLIEVDLSTNSITWSGAKLVAEAVVGKPGFKLLNINANFISDEGIDELKNIFK 492


>gi|299116824|emb|CBN74936.1| Hypothetical leucine rich repeat calcium binding protein
           [Ectocarpus siliculosus]
          Length = 2023

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 122/235 (51%), Gaps = 10/235 (4%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA +LA  L  N  + EL L  N I   GI AL + L   + +L+ L +  N I  +G  
Sbjct: 688 GAVSLALALRQNVRVEELDLSFNRISGAGIAALAASLGDPRCRLSWLSLSQNGIGRRGGE 747

Query: 378 HVAEYI----KNCKSLLWIN-LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
           H+ + +    ++     W   L  NDIG +G + + +AL QN +I  + L  N + +  A
Sbjct: 748 HLGKMLAGGSEDDGGAQWGQILDGNDIGHDGTQGLCEALLQNHSILKLSLRRNLLLADSA 807

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE--- 489
             +A++L  N  I +LDLAYNPIG +G + LS  L  + ++ TL L  C++  +G +   
Sbjct: 808 ERLAQLLLRNGAIETLDLAYNPIGPEGLRRLSGFLWKNTSLETLGLRGCEVEPTGVKSGI 867

Query: 490 -FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             +A  L  N  ++ LDL AN L +   + LA S  V N+ LT IDL  N + D+
Sbjct: 868 YTLAQGLCTNRALTSLDLAANELDEYAGQELAHSL-VKNKTLTDIDLTGNNVPDE 921



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 33/292 (11%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           TG    ESK    + A +      +++S +   D+G   LA +L  N   EE+  + N I
Sbjct: 653 TGVPLTESKIESADEADQQAPLKRINLSRQQICDDGAVSLALALRQNVRVEELDLSFNRI 712

Query: 203 TAAGIKAFDGVL-QSNIALKTLNLSGNPIGDEGVKCLCDILV----DNAGVERLQ-LSSV 256
           + AGI A    L      L  L+LS N IG  G + L  +L     D+ G +  Q L   
Sbjct: 713 SGAGIAALAASLGDPRCRLSWLSLSQNGIGRRGGEHLGKMLAGGSEDDGGAQWGQILDGN 772

Query: 257 DLRDEGAKAIAE-LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
           D+  +G + + E LL+N+SIL+ L L  N++       LA+ LL N  I +L L  N  G
Sbjct: 773 DIGHDGTQGLCEALLQNHSILK-LSLRRNLLLADSAERLAQLLLRNGAIETLDLAYNPIG 831

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G   L+  L  N SL  L L G  +   G+++                         G
Sbjct: 832 PEGLRRLSGFLWKNTSLETLGLRGCEVEPTGVKS-------------------------G 866

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            + +A+ +   ++L  ++L  N++ +   +++A +L +N+T+T IDL GNN+
Sbjct: 867 IYTLAQGLCTNRALTSLDLAANELDEYAGQELAHSLVKNKTLTDIDLTGNNV 918



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 24/180 (13%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G + G +G   L E+L  N +  ++S   N + A   +    +L  N A++TL+L+ N
Sbjct: 769 LDGNDIGHDGTQGLCEALLQNHSILKLSLRRNLLLADSAERLAQLLLRNGAIETLDLAYN 828

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
           PIG EG++ L   L  N  +E L L   ++   G K                        
Sbjct: 829 PIGPEGLRRLSGFLWKNTSLETLGLRGCEVEPTGVK------------------------ 864

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           SG  +LA+ L  N  + SL L  N         LA  L  NK+L ++ L GN++ DE +R
Sbjct: 865 SGIYTLAQGLCTNRALTSLDLAANELDEYAGQELAHSLVKNKTLTDIDLTGNNVPDEWLR 924



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 43/226 (19%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV-ITSLDL 450
           INL    I D+GA  +A AL+QN  +  +DL  N I   G +A+A  L D    ++ L L
Sbjct: 677 INLSRQQICDDGAVSLALALRQNVRVEELDLSFNRISGAGIAALAASLGDPRCRLSWLSL 736

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQ------IGASGAEFVADMLRYNNTISIL 504
           + N IG  G + L ++L   G+ +     W Q      IG  G + + + L  N++I  L
Sbjct: 737 SQNGIGRRGGEHLGKMLAG-GSEDDGGAQWGQILDGNDIGHDGTQGLCEALLQNHSILKL 795

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD--------------------- 543
            LR N L  + A+ LAQ   + N A+ ++DLA+N I  +                     
Sbjct: 796 SLRRNLLLADSAERLAQLL-LRNGAIETLDLAYNPIGPEGLRRLSGFLWKNTSLETLGLR 854

Query: 544 -----------GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
                      G + +AQ L  N   A+TSL+LA N L ++    L
Sbjct: 855 GCEVEPTGVKSGIYTLAQGLCTNR--ALTSLDLAANELDEYAGQEL 898


>gi|156354977|ref|XP_001623455.1| predicted protein [Nematostella vectensis]
 gi|156210155|gb|EDO31355.1| predicted protein [Nematostella vectensis]
          Length = 268

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 142/284 (50%), Gaps = 33/284 (11%)

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E LKNNS L  + ++   +  +  + LA+ L+ N+++  +H+ G Y G  G  ++A+ L+
Sbjct: 7   ESLKNNSTLSTIGIHFYSLGDACASELAKVLVNNTSLNIVHIGGKYLGDAGVASIAEALK 66

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
            N ++R+L + GN++  E  RAL                              E +++  
Sbjct: 67  VNTTVRKLGIKGNNMTPEAGRAL-----------------------------GEMLRHNT 97

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           ++  ++L+  +IG+ GA  IA  L QN T+  I +  + I   G SA+A+V+++    T 
Sbjct: 98  TITLLSLFHGNIGNSGALSIASGLLQNTTLEKIQIVNSCIGPTGVSALAKVIQN---ATH 154

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           LDL+ N IG  GAKA+S+V++    +  L++  C I   G   +A  +  N  +  L + 
Sbjct: 155 LDLSRNIIGTKGAKAISKVIENSCKLKYLRIDHCNIDVLGVRDIAKAVSKNTNLEELSVA 214

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
             G+ DEG   LA+S    N++L  + +  N I + G  AI +A
Sbjct: 215 HAGIDDEGMCELARSV-AKNKSLQVLTITHNNISEKGKRAIIEA 257



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 8/265 (3%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L T+ +    +GD     L  +LV+N  +  + +    L D G  +IAE LK N
Sbjct: 9   LKNNSTLSTIGIHFYSLGDACASELAKVLVNNTSLNIVHIGGKYLGDAGVASIAEALKVN 68

Query: 274 SILRVLELN-NNMIDYSGFTSLAEALLENSTIRSLHL-NGNYGGALGANALAKGLEGNKS 331
           + +R L +  NNM   +G  +L E L  N+TI  L L +GN G + GA ++A GL  N +
Sbjct: 69  TTVRKLGIKGNNMTPEAG-RALGEMLRHNTTITLLSLFHGNIGNS-GALSIASGLLQNTT 126

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L ++ +  + IG  G+ AL   + +       LD+  N I  KGA  +++ I+N   L +
Sbjct: 127 LEKIQIVNSCIGPTGVSALAKVIQNATH----LDLSRNIIGTKGAKAISKVIENSCKLKY 182

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + +   +I   G   IA A+ +N  +  + +    I  +G   +AR +  N  +  L + 
Sbjct: 183 LRIDHCNIDVLGVRDIAKAVSKNTNLEELSVAHAGIDDEGMCELARSVAKNKSLQVLTIT 242

Query: 452 YNPIGADGAKALSEVLKFHGNINTL 476
           +N I   G +A+ E      ++N L
Sbjct: 243 HNNISEKGKRAIIEACAMSQSLNHL 267



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 4/254 (1%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           L ESL  N T   +      +  A       VL +N +L  +++ G  +GD GV  + + 
Sbjct: 5   LFESLKNNSTLSTIGIHFYSLGDACASELAKVLVNNTSLNIVHIGGKYLGDAGVASIAEA 64

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  V +L +   ++  E  +A+ E+L++N+ + +L L +  I  SG  S+A  LL+N
Sbjct: 65  LKVNTTVRKLGIKGNNMTPEAGRALGEMLRHNTTITLLSLFHGNIGNSGALSIASGLLQN 124

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           +T+  + +  +  G  G +ALAK ++   +   L L  N IG +G +A+ S +     KL
Sbjct: 125 TTLEKIQIVNSCIGPTGVSALAKVIQ---NATHLDLSRNIIGTKGAKAI-SKVIENSCKL 180

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L I + +I   G   +A+ +    +L  +++    I DEG  ++A ++ +N+++  + 
Sbjct: 181 KYLRIDHCNIDVLGVRDIAKAVSKNTNLEELSVAHAGIDDEGMCELARSVAKNKSLQVLT 240

Query: 422 LGGNNIHSKGASAI 435
           +  NNI  KG  AI
Sbjct: 241 ITHNNISEKGKRAI 254



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 118/237 (49%), Gaps = 7/237 (2%)

Query: 156 EFAKEL---RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
           E AK L    + + V + G+  GD G+  +AE+L  N T  ++    N +T    +A   
Sbjct: 32  ELAKVLVNNTSLNIVHIGGKYLGDAGVASIAEALKVNTTVRKLGIKGNNMTPEAGRALGE 91

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L+ N  +  L+L    IG+ G   +   L+ N  +E++Q+ +  +   G  A+A++++N
Sbjct: 92  MLRHNTTITLLSLFHGNIGNSGALSIASGLLQNTTLEKIQIVNSCIGPTGVSALAKVIQN 151

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            +    L+L+ N+I   G  ++++ +  +  ++ L ++      LG   +AK +  N +L
Sbjct: 152 AT---HLDLSRNIIGTKGAKAISKVIENSCKLKYLRIDHCNIDVLGVRDIAKAVSKNTNL 208

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            EL +    I DEG+  L   ++  K  L VL I +N+IS KG   + E     +SL
Sbjct: 209 EELSVAHAGIDDEGMCELARSVAKNK-SLQVLTITHNNISEKGKRAIIEACAMSQSL 264



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 4/173 (2%)

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           E +KN  +L  I ++   +GD  A ++A  L  N ++  + +GG  +   G ++IA  LK
Sbjct: 7   ESLKNNSTLSTIGIHFYSLGDACASELAKVLVNNTSLNIVHIGGKYLGDAGVASIAEALK 66

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ +  L +  N +  +  +AL E+L+ +  I  L L    IG SGA  +A  L  N T
Sbjct: 67  VNTTVRKLGIKGNNMTPEAGRALGEMLRHNTTITLLSLFHGNIGNSGALSIASGLLQNTT 126

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
           +  + +  + +   G   LA   KV+  A T +DL+ N I   GA AI++ ++
Sbjct: 127 LEKIQIVNSCIGPTGVSALA---KVIQNA-THLDLSRNIIGTKGAKAISKVIE 175



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 31/177 (17%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+ + L E  +     + + +   N G+ G   +A  L  N T E++    + I   G+ 
Sbjct: 84  EAGRALGEMLRHNTTITLLSLFHGNIGNSGALSIASGLLQNTTLEKIQIVNSCIGPTGVS 143

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCL-----------------CDILV-------- 243
           A   V+Q+      L+LS N IG +G K +                 C+I V        
Sbjct: 144 ALAKVIQN---ATHLDLSRNIIGTKGAKAISKVIENSCKLKYLRIDHCNIDVLGVRDIAK 200

Query: 244 ---DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
               N  +E L ++   + DEG   +A  +  N  L+VL + +N I   G  ++ EA
Sbjct: 201 AVSKNTNLEELSVAHAGIDDEGMCELARSVAKNKSLQVLTITHNNISEKGKRAIIEA 257


>gi|195997037|ref|XP_002108387.1| hypothetical protein TRIADDRAFT_52814 [Trichoplax adhaerens]
 gi|190589163|gb|EDV29185.1| hypothetical protein TRIADDRAFT_52814 [Trichoplax adhaerens]
          Length = 611

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 128/247 (51%), Gaps = 1/247 (0%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K L+LS   +G   +K L   LV+N    +L L    L  EGA AIA ++K N+ ++ + 
Sbjct: 123 KGLHLSHLGLGSRDIKILAQSLVENTATVKLDLQDNRLEGEGAVAIANMMKENTTIKEIN 182

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L  N I   G  ++AE LL N+ + SL+++GN      A  L++ +  N  L+ L+L  N
Sbjct: 183 LAENRIRSEGANAVAEMLLYNTEMLSLNVSGNDFEDNDAEILSEPIMINFHLQTLNLSHN 242

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
                G + L S ++   G +  LD+  N +  KGA  +A  +++   L ++NL  N   
Sbjct: 243 KFSIIGGQFLGSAIAQNDG-IEDLDLSWNHLRKKGAHAIAIALRSNVRLKYLNLSWNGFA 301

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D+GA  + + LK N T+  +DL  N I  KGA A+A  L  N  I  + +  NPI A+G 
Sbjct: 302 DDGAAIMGETLKYNNTLLELDLSNNRIGVKGAKALALGLAVNDTIRVIKIGKNPIYAEGC 361

Query: 461 KALSEVL 467
            ++ E +
Sbjct: 362 CSILEAI 368



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 2/229 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           LHL    +G   I+ L   L      +  LD+ +N +  +GA  +A  +K   ++  INL
Sbjct: 125 LHLSHLGLGSRDIKILAQSLVENTATVK-LDLQDNRLEGEGAVAIANMMKENTTIKEINL 183

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EGA  +A+ L  N  + ++++ GN+     A  ++  +  N  + +L+L++N 
Sbjct: 184 AENRIRSEGANAVAEMLLYNTEMLSLNVSGNDFEDNDAEILSEPIMINFHLQTLNLSHNK 243

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
               G + L   +  +  I  L L W  +   GA  +A  LR N  +  L+L  NG  D+
Sbjct: 244 FSIIGGQFLGSAIAQNDGIEDLDLSWNHLRKKGAHAIAIALRSNVRLKYLNLSWNGFADD 303

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           GA  + ++ K  N  L  +DL+ N I   GA A+A  L  N+ + V  +
Sbjct: 304 GAAIMGETLK-YNNTLLELDLSNNRIGVKGAKALALGLAVNDTIRVIKI 351



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 15/286 (5%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFF------------LAESLGYNQTAEEVSFAANG 201
           +NE  K  +  + V    R+F D+GL              LA+SL  N    ++    N 
Sbjct: 102 INECKK--KGMTPVSHYVRHFTDKGLHLSHLGLGSRDIKILAQSLVENTATVKLDLQDNR 159

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +   G  A   +++ N  +K +NL+ N I  EG   + ++L+ N  +  L +S  D  D 
Sbjct: 160 LEGEGAVAIANMMKENTTIKEINLAENRIRSEGANAVAEMLLYNTEMLSLNVSGNDFEDN 219

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
            A+ ++E +  N  L+ L L++N     G   L  A+ +N  I  L L+ N+    GA+A
Sbjct: 220 DAEILSEPIMINFHLQTLNLSHNKFSIIGGQFLGSAIAQNDGIEDLDLSWNHLRKKGAHA 279

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A  L  N  L+ L+L  N   D+G  A+M         L  LD+ NN I  KGA  +A 
Sbjct: 280 IAIALRSNVRLKYLNLSWNGFADDGA-AIMGETLKYNNTLLELDLSNNRIGVKGAKALAL 338

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            +    ++  I +  N I  EG   I +A+ +N     +D+   +I
Sbjct: 339 GLAVNDTIRVIKIGKNPIYAEGCCSILEAINRNPRTVIVDIEMQDI 384



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 121/247 (48%), Gaps = 2/247 (0%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA++L+EN+    L L  N     GA A+A  ++ N +++E++L  N I  EG  A+   
Sbjct: 140 LAQSLVENTATVKLDLQDNRLEGEGAVAIANMMKENTTIKEINLAENRIRSEGANAVAEM 199

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L      L+ L++  N      A  ++E I     L  +NL  N     G + +  A+ Q
Sbjct: 200 LLYNTEMLS-LNVSGNDFEDNDAEILSEPIMINFHLQTLNLSHNKFSIIGGQFLGSAIAQ 258

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N  I  +DL  N++  KGA AIA  L+ N  +  L+L++N    DGA  + E LK++  +
Sbjct: 259 NDGIEDLDLSWNHLRKKGAHAIAIALRSNVRLKYLNLSWNGFADDGAAIMGETLKYNNTL 318

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
             L L   +IG  GA+ +A  L  N+TI ++ +  N +  EG   + ++    N     +
Sbjct: 319 LELDLSNNRIGVKGAKALALGLAVNDTIRVIKIGKNPIYAEGCCSILEAIN-RNPRTVIV 377

Query: 534 DLAFNEI 540
           D+   +I
Sbjct: 378 DIEMQDI 384



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 2/263 (0%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   +D+       EG   +A  +  N T +E++ A N I + G  A   +L  N  + +
Sbjct: 149 ATVKLDLQDNRLEGEGAVAIANMMKENTTIKEINLAENRIRSEGANAVAEMLLYNTEMLS 208

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LN+SGN   D   + L + ++ N  ++ L LS       G + +   +  N  +  L+L+
Sbjct: 209 LNVSGNDFEDNDAEILSEPIMINFHLQTLNLSHNKFSIIGGQFLGSAIAQNDGIEDLDLS 268

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N +   G  ++A AL  N  ++ L+L+ N     GA  + + L+ N +L EL L  N I
Sbjct: 269 WNHLRKKGAHAIAIALRSNVRLKYLNLSWNGFADDGAAIMGETLKYNNTLLELDLSNNRI 328

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI-GD 401
           G +G +AL  GL+     + V+ IG N I A+G   + E I      + +++ M DI  D
Sbjct: 329 GVKGAKALALGLAV-NDTIRVIKIGKNPIYAEGCCSILEAINRNPRTVIVDIEMQDILID 387

Query: 402 EGAEKIADALKQNRTITTIDLGG 424
           +   KI + + +      I  GG
Sbjct: 388 DVCGKILEEITKKFPTIKITHGG 410


>gi|332242716|ref|XP_003270528.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Nomascus leucogenys]
          Length = 953

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 112/200 (56%), Gaps = 1/200 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N + ++G  ++AR
Sbjct: 803 CLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQS 922

Query: 498 NNTISILDLRANGLRDEGAK 517
           N  I+ + L  N ++ E AK
Sbjct: 923 NTGITEICLNGNLIKPEEAK 942



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 114/219 (52%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L VL +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELRPCFS----RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL++N  +    LN
Sbjct: 895 -NQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLN 932



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VRELRPCFSRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L +N +   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L S  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELNDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGN 934



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 77/139 (55%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T L L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L     ++
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLT 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG KCLA + K  +++++ + +  N++ D+GA A A+AL+ +   ++T+
Sbjct: 788 HLKLGKNKITSEGGKCLALAVKN-SKSISDVGMWGNQVGDEGAKAFAEALRNHP--SLTT 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA+N ++  G  +L  A
Sbjct: 845 LSLASNGVSTEGGKSLARA 863


>gi|444727434|gb|ELW67927.1| Nucleotide-binding oligomerization domain-containing protein 1
            [Tupaia chinensis]
          Length = 1109

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 114/219 (52%), Gaps = 5/219 (2%)

Query: 346  GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
            G++ L    S    +L V+ +  N I+ KG   + E +   + L ++ LY N I D GA 
Sbjct: 875  GVQELQPCFS----RLTVIRLSVNQITDKGVKVLYEELSKYRILTFLGLYSNQITDVGAR 930

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             IA  L + + +T + LG N+I S+G   +A  +K++  I  + +  N IG +GAKA +E
Sbjct: 931  YIAKLLDECKGLTHLKLGKNSITSEGGKCLALAVKNSKSIFEVGMWGNRIGDEGAKAFAE 990

Query: 466  VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
             L+ H ++  L L +  I   G + +A  L++N ++ I  L  N L DE A+ LA+  K 
Sbjct: 991  ALRNHPSLTNLSLAYNGISTEGGKSLAQALQWNASLRIFWLTKNELDDEVAESLAEMLK- 1049

Query: 526  VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            VN+ L  + L  N+I   G   +A+ L+ N  +    LN
Sbjct: 1050 VNQTLKHLWLIQNQITAKGIAQLAEGLQKNTGIMEICLN 1088



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 112/209 (53%), Gaps = 1/209 (0%)

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            G   L + L   + L  L L+ N I D G R +   L   KG L  L +G NSI+++G  
Sbjct: 900  GVKVLYEELSKYRILTFLGLYSNQITDVGARYIAKLLDECKG-LTHLKLGKNSITSEGGK 958

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
             +A  +KN KS+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++A+
Sbjct: 959  CLALAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAYNGISTEGGKSLAQ 1018

Query: 438  VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
             L+ N+ +    L  N +  + A++L+E+LK +  +  L L   QI A G   +A+ L+ 
Sbjct: 1019 ALQWNASLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLAEGLQK 1078

Query: 498  NNTISILDLRANGLRDEGAKCLAQSFKVV 526
            N  I  + L  N ++ E AK      ++V
Sbjct: 1079 NTGIMEICLNGNLIKPEEAKVFEDEKRIV 1107



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 95/202 (47%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            + +S     D+G+  L E L   +    +   +N IT  G +    +L     L  L L 
Sbjct: 889  IRLSVNQITDKGVKVLYEELSKYRILTFLGLYSNQITDVGARYIAKLLDECKGLTHLKLG 948

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 949  KNSITSEGGKCLALAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAYNGI 1008

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
               G  SLA+AL  N+++R   L  N      A +LA+ L+ N++L+ L L  N I  +G
Sbjct: 1009 STEGGKSLAQALQWNASLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKG 1068

Query: 347  IRALMSGLSSRKGKLAVLDIGN 368
            I  L  GL    G + +   GN
Sbjct: 1069 IAQLAEGLQKNTGIMEICLNGN 1090



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 96/194 (49%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            + L E   + R  + + +      D G  ++A+ L   +    +    N IT+ G K   
Sbjct: 902  KVLYEELSKYRILTFLGLYSNQITDVGARYIAKLLDECKGLTHLKLGKNSITSEGGKCLA 961

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              ++++ ++  + + GN IGDEG K   + L ++  +  L L+   +  EG K++A+ L+
Sbjct: 962  LAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAYNGISTEGGKSLAQALQ 1021

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N+ LR+  L  N +D     SLAE L  N T++ L L  N   A G   LA+GL+ N  
Sbjct: 1022 WNASLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLAEGLQKNTG 1081

Query: 332  LRELHLHGNSIGDE 345
            + E+ L+GN I  E
Sbjct: 1082 IMEICLNGNLIKPE 1095


>gi|291237672|ref|XP_002738757.1| PREDICTED: leucine rich repeat containing 45-like [Saccoglossus
           kowalevskii]
          Length = 453

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N +   G   +A  +K    +  +NL  N +G +GA  + D L+ N T+  I+L 
Sbjct: 38  LDLTGNHVEGAGGKCIAAMLKENCYISELNLSSNKLGSQGARAVGDMLEHNTTLQRINLS 97

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N    K A    + LK N  +  L L  N     G + L E +  +  ++ L L W  +
Sbjct: 98  ANEFKDKDAEPFTQALKSNYRLKELILNNNDFSEIGGEFLGEAIASNDTLDILDLSWNHL 157

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
              GA  ++  +  NN+I ILDL  NG  +EGA  + Q+ K VN+ L  +DL  N I +D
Sbjct: 158 RNRGAIAISKAMAENNSIRILDLSWNGFANEGALAMGQALK-VNKQLIDLDLTNNRITND 216

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFG------------QSALTDAK 582
           GA AIA+ L++N+ + V  L +  N ++  G            QSALTD +
Sbjct: 217 GALAIAKGLESNDTLKV--LKIGKNPISAAGAMAILMAISKNPQSALTDIR 265



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 149/323 (46%), Gaps = 40/323 (12%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +    N +  AG K    +L+ N  +  LNLS N +G +G + + D+L  N  ++R+ LS
Sbjct: 38  LDLTGNHVEGAGGKCIAAMLKENCYISELNLSSNKLGSQGARAVGDMLEHNTTLQRINLS 97

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           + + +D+ A+   + LK+N  L+ L LNNN     G   L EA+  N T+  L L+ N+ 
Sbjct: 98  ANEFKDKDAEPFTQALKSNYRLKELILNNNDFSEIGGEFLGEAIASNDTLDILDLSWNHL 157

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
              GA A++K +  N S+R                             +LD+  N  + +
Sbjct: 158 RNRGAIAISKAMAENNSIR-----------------------------ILDLSWNGFANE 188

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  + + +K  K L+ ++L  N I ++GA  IA  L+ N T+  + +G N I + GA A
Sbjct: 189 GALAMGQALKVNKQLIDLDLTNNRITNDGALAIAKGLESNDTLKVLKIGKNPISAAGAMA 248

Query: 435 IARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ-IGASGAEF- 490
           I   +  N  S +T + L    I  +  + L  + K   ++     G  +  G +GAE  
Sbjct: 249 ILMAISKNPQSALTDIRLTDIIITEEFEEMLKAIQKTRSDLRIEHGGTARHHGTNGAEIE 308

Query: 491 -----VADMLRY--NNTISILDL 506
                +  +L Y   N + +LDL
Sbjct: 309 KKSDPLQKLLDYVQKNNLRLLDL 331



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 140/265 (52%), Gaps = 4/265 (1%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D++G +    G   +A  L  N    E++ ++N + + G +A   +L+ N  L+ +NL
Sbjct: 37  SLDLTGNHVEGAGGKCIAAMLKENCYISELNLSSNKLGSQGARAVGDMLEHNTTLQRINL 96

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S N   D+  +     L  N  ++ L L++ D  + G + + E + +N  L +L+L+ N 
Sbjct: 97  SANEFKDKDAEPFTQALKSNYRLKELILNNNDFSEIGGEFLGEAIASNDTLDILDLSWNH 156

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +   G  ++++A+ EN++IR L L+ N     GA A+ + L+ NK L +L L  N I ++
Sbjct: 157 LRNRGAIAISKAMAENNSIRILDLSWNGFANEGALAMGQALKVNKQLIDLDLTNNRITND 216

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI-KNCKSLLWINLYMND-IGDEG 403
           G  A+  GL S    L VL IG N ISA GA  +   I KN +S L  ++ + D I  E 
Sbjct: 217 GALAIAKGLES-NDTLKVLKIGKNPISAAGAMAILMAISKNPQSAL-TDIRLTDIIITEE 274

Query: 404 AEKIADALKQNRTITTIDLGGNNIH 428
            E++  A+++ R+   I+ GG   H
Sbjct: 275 FEEMLKAIQKTRSDLRIEHGGTARH 299



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 29/259 (11%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           +G  + + + +SN  + +L+L+GN +   G KC+  +L +N  +  L LSS  L  +GA+
Sbjct: 20  SGHLSTNSIEKSNTVVISLDLTGNHVEGAGGKCIAAMLKENCYISELNLSSNKLGSQGAR 79

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+ ++L++N+ L+ + L+ N           +AL  N  ++ L LN N    +G   L +
Sbjct: 80  AVGDMLEHNTTLQRINLSANEFKDKDAEPFTQALKSNYRLKELILNNNDFSEIGGEFLGE 139

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            +  N +                             L +LD+  N +  +GA  +++ + 
Sbjct: 140 AIASNDT-----------------------------LDILDLSWNHLRNRGAIAISKAMA 170

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
              S+  ++L  N   +EGA  +  ALK N+ +  +DL  N I + GA AIA+ L+ N  
Sbjct: 171 ENNSIRILDLSWNGFANEGALAMGQALKVNKQLIDLDLTNNRITNDGALAIAKGLESNDT 230

Query: 445 ITSLDLAYNPIGADGAKAL 463
           +  L +  NPI A GA A+
Sbjct: 231 LKVLKIGKNPISAAGAMAI 249



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 75/166 (45%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              +++S   F D+      ++L  N   +E+    N  +  G +     + SN  L  L
Sbjct: 91  LQRINLSANEFKDKDAEPFTQALKSNYRLKELILNNNDFSEIGGEFLGEAIASNDTLDIL 150

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N + + G   +   + +N  +  L LS     +EGA A+ + LK N  L  L+L N
Sbjct: 151 DLSWNHLRNRGAIAISKAMAENNSIRILDLSWNGFANEGALAMGQALKVNKQLIDLDLTN 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           N I   G  ++A+ L  N T++ L +  N   A GA A+   +  N
Sbjct: 211 NRITNDGALAIAKGLESNDTLKVLKIGKNPISAAGAMAILMAISKN 256


>gi|154346260|ref|XP_001569067.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134066409|emb|CAM44200.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 1079

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 172/412 (41%), Gaps = 65/412 (15%)

Query: 195 VSFAANGITA--AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           V F+ N +T     +      L+ N  ++ LNLS N  GD G   L D +  N+ +  L 
Sbjct: 463 VDFSGNDVTLNDDSVWVLAQALRLNSTVRRLNLSHNSFGDMGASYLADYIASNSTMLELN 522

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           LSS  + + GA  + E L  N  L++L+L+NNM+D  G ++L   L EN+T+R L L   
Sbjct: 523 LSSCTIGNRGAHRLCEALATNQTLQLLDLSNNMMDGDGLSALLRVLRENNTLRELKLERT 582

Query: 313 YGGA-------------------------------------------------LGANALA 323
              A                                                 L  + + 
Sbjct: 583 RVPAEFVERVKIACSLNRECAAVKRVCYRLHDEDVSLKKIELSNPDDERVIDDLSVSTIC 642

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L  N  +  + L GN IG+ G  AL + LS R  K+  +++  N I       + +  
Sbjct: 643 TALNNNTFVEVIDLSGNHIGENGCAALAAMLSQRTCKVRTINLSKNPIDDDAVAKLVDGF 702

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
            N K+L  + LY  +I D G E +A  L++N++I  I +  ++  SK  S + R L  N+
Sbjct: 703 PNTKTLREVLLYNTNITDLGIEILAKGLEKNQSIVWIGVADDDAVSKQVSLLKRNLALNT 762

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
             T  +L +  +  D    L +V       +  +   C +  S  +F+   L  +  +  
Sbjct: 763 GPT--ELKHIILSIDAGAVLEDV-------DMSRPIDCSLDDSMCQFLCASLVGSRMLRS 813

Query: 504 LDLRANGLRDEGAKCLAQSFKVVN--EALTSIDLAFNEIRDDGAFAIAQALK 553
           L L  N L    + C+    +VV    +L S+DL+ N+I + GA  I   L+
Sbjct: 814 LKLSHNTL---SSACVPYIVEVVELCPSLVSLDLSDNQIDESGAQQIIACLE 862



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 181/432 (41%), Gaps = 98/432 (22%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L +F         +++S     D GL  L+++L  N T + +  A   +TAAGI+    V
Sbjct: 319 LADFIAASSVIQHLNISNTLVDDAGLKLLSDALQKNSTLKVIELANCHVTAAGIQTLFVV 378

Query: 214 L-QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA----IAE 268
           L +   A++ +N++ N + D+ V+ +   L  N  +  L   +VD+    + A    IA 
Sbjct: 379 LAKGKCAVEEVNIANNSLDDDSVQFITAALRANPKLTTL---NVDVNPAISAASMQEIAG 435

Query: 269 LLKNN-------SILRVLELNNN---MIDYSG---------FTSLAEALLENSTIRSLHL 309
           L   N       S+L  +E N      +D+SG            LA+AL  NST+R L+L
Sbjct: 436 LTMVNRAPPRIRSVLPSIENNCKDVVSVDFSGNDVTLNDDSVWVLAQALRLNSTVRRLNL 495

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N  G +GA+ LA  +  N ++ EL+L   +IG+ G   L   L++ +  L +LD+ NN
Sbjct: 496 SHNSFGDMGASYLADYIASNSTMLELNLSSCTIGNRGAHRLCEALATNQ-TLQLLDLSNN 554

Query: 370 SISAKGAFHV---------------------AEYI----------KNCKSLLWINLYMND 398
            +   G   +                     AE++          + C ++  +   ++D
Sbjct: 555 MMDGDGLSALLRVLRENNTLRELKLERTRVPAEFVERVKIACSLNRECAAVKRVCYRLHD 614

Query: 399 ------------------IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                             I D     I  AL  N  +  IDL GN+I   G +A+A +L 
Sbjct: 615 EDVSLKKIELSNPDDERVIDDLSVSTICTALNNNTFVEVIDLSGNHIGENGCAALAAMLS 674

Query: 441 DNSV-ITSLDLAYNPIGADGA----------KALSEVLKFHGNINTLKLGWCQIGASGAE 489
             +  + +++L+ NPI  D            K L EVL ++ NI  L          G E
Sbjct: 675 QRTCKVRTINLSKNPIDDDAVAKLVDGFPNTKTLREVLLYNTNITDL----------GIE 724

Query: 490 FVADMLRYNNTI 501
            +A  L  N +I
Sbjct: 725 ILAKGLEKNQSI 736



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 122/536 (22%), Positives = 208/536 (38%), Gaps = 130/536 (24%)

Query: 166 SVDMSGRN--FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           SVD SG +    D+ ++ LA++L  N T   ++ + N     G       + SN  +  L
Sbjct: 462 SVDFSGNDVTLNDDSVWVLAQALRLNSTVRRLNLSHNSFGDMGASYLADYIASNSTMLEL 521

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL-- 281
           NLS   IG+ G   LC+ L  N  ++ L LS+  +  +G  A+  +L+ N+ LR L+L  
Sbjct: 522 NLSSCTIGNRGAHRLCEALATNQTLQLLDLSNNMMDGDGLSALLRVLRENNTLRELKLER 581

Query: 282 -----------------------------------------------NNNMIDYSGFTSL 294
                                                          +  +ID    +++
Sbjct: 582 TRVPAEFVERVKIACSLNRECAAVKRVCYRLHDEDVSLKKIELSNPDDERVIDDLSVSTI 641

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSG 353
             AL  N+ +  + L+GN+ G  G  ALA  L +    +R ++L  N I D+ +  L+ G
Sbjct: 642 CTALNNNTFVEVIDLSGNHIGENGCAALAAMLSQRTCKVRTINLSKNPIDDDAVAKLVDG 701

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI-----------------NLYM 396
             + K    VL + N +I+  G   +A+ ++  +S++WI                 NL +
Sbjct: 702 FPNTKTLREVL-LYNTNITDLGIEILAKGLEKNQSIVWIGVADDDAVSKQVSLLKRNLAL 760

Query: 397 N------------------------------DIGDEGAEKIADALKQNRTITTIDLGGNN 426
           N                               + D   + +  +L  +R + ++ L  N 
Sbjct: 761 NTGPTELKHIILSIDAGAVLEDVDMSRPIDCSLDDSMCQFLCASLVGSRMLRSLKLSHNT 820

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           + S     I  V++    + SLDL+ N I   GA+ +   L+   ++ ++ +        
Sbjct: 821 LSSACVPYIVEVVELCPSLVSLDLSDNQIDESGAQQIIACLERVSHLRSVDVTNNLFSPQ 880

Query: 487 GAEFVADMLRYNNTISIL---------------DLRANG------LRDEGAKCLA---QS 522
             E V+ ++  N    +L               D+  NG      L DE    LA   Q 
Sbjct: 881 SLERVSHLVSLNLGSEVLKKLHLATARGEALPKDIDLNGVTNSYKLTDEDVVILAGILQD 940

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
             VV     S+DL+ N   D G  AIA+ L+ N   A+ +LNL  N +   G +AL
Sbjct: 941 CSVVK----SLDLSSNNFSDAGCIAIAEVLRVNH--ALEALNLTGNAIGANGGAAL 990



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 161/384 (41%), Gaps = 71/384 (18%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +A+ +  +S+++ L ++N ++D +G   L++AL +NST++ + L   +  A G   L   
Sbjct: 319 LADFIAASSVIQHLNISNTLVDDAGLKLLSDALQKNSTLKVIELANCHVTAAGIQTLFVV 378

Query: 326 L-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG-NNSISAKGAFHVAEYI 383
           L +G  ++ E+++  NS+ D+ ++ + + L +   KL  L++  N +ISA     +A   
Sbjct: 379 LAKGKCAVEEVNIANNSLDDDSVQFITAALRANP-KLTTLNVDVNPAISAASMQEIAGLT 437

Query: 384 -----------------KNCKSLL----------------WI--------------NLYM 396
                             NCK ++                W+              NL  
Sbjct: 438 MVNRAPPRIRSVLPSIENNCKDVVSVDFSGNDVTLNDDSVWVLAQALRLNSTVRRLNLSH 497

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N  GD GA  +AD +  N T+  ++L    I ++GA  +   L  N  +  LDL+ N + 
Sbjct: 498 NSFGDMGASYLADYIASNSTMLELNLSSCTIGNRGAHRLCEALATNQTLQLLDLSNNMMD 557

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            DG  AL  VL+ +  +  LKL   ++ A   E V      N   + +      L DE  
Sbjct: 558 GDGLSALLRVLRENNTLRELKLERTRVPAEFVERVKIACSLNRECAAVKRVCYRLHDEDV 617

Query: 517 KCLAQSF------KVVNEALTS--------------IDLAFNEIRDDGAFAIAQALKANE 556
                        +V+++   S              IDL+ N I ++G  A+A A+ +  
Sbjct: 618 SLKKIELSNPDDERVIDDLSVSTICTALNNNTFVEVIDLSGNHIGENGCAALA-AMLSQR 676

Query: 557 DVAVTSLNLANNFLTKFGQSALTD 580
              V ++NL+ N +     + L D
Sbjct: 677 TCKVRTINLSKNPIDDDAVAKLVD 700



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 101/456 (22%), Positives = 196/456 (42%), Gaps = 82/456 (17%)

Query: 130 WSVGAGTNLLSG------FTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFL- 182
           + +   + LLSG      F+G  + + ++ L ++  +L    +VD SG + G  G+F + 
Sbjct: 129 YPLAVRSTLLSGKASQISFSGMSYGDLEKELLQYLLQLEGLEAVDFSGLDLGPGGMFVVG 188

Query: 183 ----------------------------AESLGYNQTAEEVSFAAN-GITAAGI-KAFDG 212
                                       A  L ++++     F++N G+T   + K    
Sbjct: 189 TFLKDTQVSSLSFRECSLTNDAVLKFVEAADLAHHRSLRSFDFSSNMGLTNDLVRKLISS 248

Query: 213 VLQSNIALKTLNLSGNPIGDEG---VKCLCDILVDNAGVERLQLSSVDLRDEGAKA---- 265
           +   N  + +  L+   I       V+  C +  ++  ++R   + V LR+  + A    
Sbjct: 249 MFDHNSCITSFVLTATSITPAYCGVVQKECAVNQEHPAIKR---AVVALRNNSSAAQEIN 305

Query: 266 -------------IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
                        +A+ +  +S+++ L ++N ++D +G   L++AL +NST++ + L   
Sbjct: 306 LQWDAPLPTCMYHLADFIAASSVIQHLNISNTLVDDAGLKLLSDALQKNSTLKVIELANC 365

Query: 313 YGGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG-NNS 370
           +  A G   L   L +G  ++ E+++  NS+ D+ ++ + + L +   KL  L++  N +
Sbjct: 366 HVTAAGIQTLFVVLAKGKCAVEEVNIANNSLDDDSVQFITAALRANP-KLTTLNVDVNPA 424

Query: 371 ISAKGAFHVAEYI-----------------KNCKSLLWINLYMNDI--GDEGAEKIADAL 411
           ISA     +A                     NCK ++ ++   ND+   D+    +A AL
Sbjct: 425 ISAASMQEIAGLTMVNRAPPRIRSVLPSIENNCKDVVSVDFSGNDVTLNDDSVWVLAQAL 484

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           + N T+  ++L  N+    GAS +A  +  NS +  L+L+   IG  GA  L E L  + 
Sbjct: 485 RLNSTVRRLNLSHNSFGDMGASYLADYIASNSTMLELNLSSCTIGNRGAHRLCEALATNQ 544

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            +  L L    +   G   +  +LR NNT+  L L 
Sbjct: 545 TLQLLDLSNNMMDGDGLSALLRVLRENNTLRELKLE 580



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 175/438 (39%), Gaps = 80/438 (18%)

Query: 172  RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL-QSNIALKTLNLSGNPI 230
            R   D  +  +  +L  N   E +  + N I   G  A   +L Q    ++T+NLS NPI
Sbjct: 631  RVIDDLSVSTICTALNNNTFVEVIDLSGNHIGENGCAALAAMLSQRTCKVRTINLSKNPI 690

Query: 231  GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE-LLKNNSIL------------- 276
             D+ V  L D   +   +  + L + ++ D G + +A+ L KN SI+             
Sbjct: 691  DDDAVAKLVDGFPNTKTLREVLLYNTNITDLGIEILAKGLEKNQSIVWIGVADDDAVSKQ 750

Query: 277  -----RVLELN----------------------------NNMIDYSGFTSLAEALLENST 303
                 R L LN                            +  +D S    L  +L+ +  
Sbjct: 751  VSLLKRNLALNTGPTELKHIILSIDAGAVLEDVDMSRPIDCSLDDSMCQFLCASLVGSRM 810

Query: 304  IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
            +RSL L+ N   +     + + +E   SL  L L  N I + G + +++ L  R   L  
Sbjct: 811  LRSLKLSHNTLSSACVPYIVEVVELCPSLVSLDLSDNQIDESGAQQIIACLE-RVSHLRS 869

Query: 364  LDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYM---------NDIG-----------DE 402
            +D+ NN  S +    V+  +  N  S +   L++          DI            DE
Sbjct: 870  VDVTNNLFSPQSLERVSHLVSLNLGSEVLKKLHLATARGEALPKDIDLNGVTNSYKLTDE 929

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
                +A  L+    + ++DL  NN    G  AIA VL+ N  + +L+L  N IGA+G  A
Sbjct: 930  DVVILAGILQDCSVVKSLDLSSNNFSDAGCIAIAEVLRVNHALEALNLTGNAIGANGGAA 989

Query: 463  LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT-----ISILDLRANGLRDEGA- 516
            L   LK +  +  + L    I     E +A +L  N T     I + D++ + + DE   
Sbjct: 990  LYFALKVNPQLQHIWLENTAIPREILEDIASLLHVNQTPYRAVIDMRDVKLDEVSDETQF 1049

Query: 517  ----KCLAQSFKVVNEAL 530
                  +AQ+  + NE++
Sbjct: 1050 RSTDYYVAQTISLKNESI 1067



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 108/241 (44%), Gaps = 38/241 (15%)

Query: 360 KLAVLDIGNNSISAK------------GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
           K AV+ + NNS +A+              +H+A++I     +  +N+    + D G + +
Sbjct: 288 KRAVVALRNNSSAAQEINLQWDAPLPTCMYHLADFIAASSVIQHLNISNTLVDDAGLKLL 347

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYNPIGADGAKALSEV 466
           +DAL++N T+  I+L   ++ + G   +  VL K    +  +++A N +  D  + ++  
Sbjct: 348 SDALQKNSTLKVIELANCHVTAAGIQTLFVVLAKGKCAVEEVNIANNSLDDDSVQFITAA 407

Query: 467 LKFHGNINTLKLGW-CQIGASGAEFVADMLRYNNTI----SILDLRANGLRDEGAKCLAQ 521
           L+ +  + TL +     I A+  + +A +   N       S+L    N  +D        
Sbjct: 408 LRANPKLTTLNVDVNPAISAASMQEIAGLTMVNRAPPRIRSVLPSIENNCKD-------- 459

Query: 522 SFKVVNEALTSIDLAFNEI--RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
                   + S+D + N++   DD  + +AQAL+ N    V  LNL++N     G S L 
Sbjct: 460 --------VVSVDFSGNDVTLNDDSVWVLAQALRLNS--TVRRLNLSHNSFGDMGASYLA 509

Query: 580 D 580
           D
Sbjct: 510 D 510



 Score = 39.7 bits (91), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 5/124 (4%)

Query: 139  LSGFTG--KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS 196
            L+G T   KL  E    L    ++     S+D+S  NF D G   +AE L  N   E ++
Sbjct: 917  LNGVTNSYKLTDEDVVILAGILQDCSVVKSLDLSSNNFSDAGCIAIAEVLRVNHALEALN 976

Query: 197  FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
               N I A G  A    L+ N  L+ + L    I  E ++ +  +L  N    R   + +
Sbjct: 977  LTGNAIGANGGAALYFALKVNPQLQHIWLENTAIPREILEDIASLLHVNQTPYR---AVI 1033

Query: 257  DLRD 260
            D+RD
Sbjct: 1034 DMRD 1037


>gi|397474932|ref|XP_003808909.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Pan paniscus]
          Length = 488

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 104 NMEESYMNLNHHGLGPRGTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    N S+I SL L+GN      A  L + L  N  +++L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 223

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 224 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 282

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 283 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 456 GADGA 460
             DGA
Sbjct: 343 NMDGA 347



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 134/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 110 MNLNHHGLGPRGTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 168

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  ++ A  +  AL  N  I  +DL  N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 228

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 229 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 288

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
             A  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 289 EVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLES-NESLRVLKLFLNPINMDGA 347

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  A+K N    +  L+++N  +++
Sbjct: 348 ILLILAIKRNPKSRMEELDISNVLVSE 374



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 30/264 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 181 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFS-------- 231

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 232 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 272 GNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNES 331

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           + +L L  N +  +GA  L  + K
Sbjct: 332 LRVLKLFLNPINMDGAILLILAIK 355



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 129/252 (51%), Gaps = 7/252 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +  +   + +E  +S   L+ HG  +G  G +A+   L S    +  L++ +N I  +
Sbjct: 94  GVVPVSYFIRNME--ESYMNLNHHG--LGPRGTKAIAIALVSNP-TVTKLELEDNCIMEE 148

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
           G   + E ++    L  +N+  N +G EGA  I+D  ++N + I +++L GN+     A+
Sbjct: 149 GVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAA 208

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            + + L  N  I  LDL++N     G + L ++L  +  + +L L W      GA  + +
Sbjct: 209 LLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCN 268

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            LR N T++ LDL  NG  +E A  L +  + +N  L  +D+  N+I ++GA  I++ L+
Sbjct: 269 GLRGNVTLTKLDLSMNGFGNEVALALGEVLR-LNSCLVYLDIGGNDIGNEGASKISKGLE 327

Query: 554 ANEDVAVTSLNL 565
           +NE + V  L L
Sbjct: 328 SNESLRVLKLFL 339



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N T  ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYMNLNHHGLGPRGTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 228 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 5/195 (2%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N T+T ++L  N I  +G  +
Sbjct: 94  GVVPVSYFIRNMEES-YMNLNHHGLGPRGTKAIAIALVSNPTVTKLELEDNCIMEEGVLS 152

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVAD 493
           +  +L++N  +  ++++ N +G +GA+ +S+  + +  +I +L+L         A  +  
Sbjct: 153 LVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQ 212

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L  N  I  LDL  N   D G + L Q    +N  LTS+DL++N     GA A+   L+
Sbjct: 213 ALSTNYRIKKLDLSHNQFSDVGGEHLGQML-AINVGLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 554 ANEDVAVTSLNLANN 568
            N  V +T L+L+ N
Sbjct: 272 GN--VTLTKLDLSMN 284



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375


>gi|355756800|gb|EHH60408.1| Nucleotide-binding oligomerization domain protein 4 [Macaca
            fascicularis]
          Length = 1866

 Score =  103 bits (258), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 14/346 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1497 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1556

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L + +++ S  T L   L   + ++SL L  N  G +G   L++ L    SL EL L  N
Sbjct: 1557 LGHLLLNSSALTLLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS  G   +AE +  C+ L  + L  N +G
Sbjct: 1617 QIGDAGVQHLATILPGLP-ELRKIDLSVNSISPAGGMQLAESLILCRHLEELMLGCNALG 1675

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++ + L  +  +  + LA N +     
Sbjct: 1676 DPTALGLARELPQH--LRVLHLPFSHLGPGGALSLTQALDGSPHLEEISLAENNLAGG-- 1731

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                 VL+F   +  L+   L  C+I     + +         + ++ L  N L DE A 
Sbjct: 1732 -----VLRFCKELPLLRQIDLVSCKIDNQTIKLLTSSFTRCPALEVILLSWNLLGDEAAA 1786

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
             LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1787 ELAQVLPQMGR-LKRVDLEKNQITAFGAWLLAEGLAQGSSIQVIRL 1831



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 94/341 (27%), Positives = 135/341 (39%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK--------------- 221
            EGL  LA  LG+    EE+  + N     G KA    L+    LK               
Sbjct: 1509 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALT 1568

Query: 222  -------------TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                         +L L  N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1569 LLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL---------------LENST---------- 303
            +L     LR ++L+ N I  +G   LAE+L               L + T          
Sbjct: 1629 ILPGLPELRKIDLSVNSISPAGGMQLAESLILCRHLEELMLGCNALGDPTALGLARELPQ 1688

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +L + L+G+  L E+ L  N++    +R        R+  L 
Sbjct: 1689 HLRVLHLPFSHLGPGGALSLTQALDGSPHLEEISLAENNLAGGVLRFCKELPLLRQIDLV 1748

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               I N +I       +      C +L  I L  N +GDE A ++A  L Q   +  +DL
Sbjct: 1749 SCKIDNQTIKL-----LTSSFTRCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDL 1803

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1804 EKNQITAFGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQRL 1844



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 96/363 (26%), Positives = 152/363 (41%), Gaps = 33/363 (9%)

Query: 246  AGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            A +++L LS V+L    D+ +  +  LL + S L+   L ++ +   G   LA  L    
Sbjct: 1463 ARLQQLSLSQVNLCEDNDDSSLLLQNLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCH 1522

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +  L L+ N     G  AL + LEG   L+ L L    +    +  L  GLS    +L 
Sbjct: 1523 HLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALTLLTHGLSHMT-RLQ 1581

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +  NSI   G  H++E ++   SL  ++L  N IGD G + +A  L     +  IDL
Sbjct: 1582 SLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDL 1641

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
              N+I   G   +A  L     +  L L  N +G   A  L+  L  H  +  L L +  
Sbjct: 1642 SVNSISPAGGMQLAESLILCRHLEELMLGCNALGDPTALGLARELPQH--LRVLHLPFSH 1699

Query: 483  IGASGA---------------------EFVADMLRYNNTISIL---DLRANGLRDEGAKC 518
            +G  GA                          +LR+   + +L   DL +  + ++  K 
Sbjct: 1700 LGPGGALSLTQALDGSPHLEEISLAENNLAGGVLRFCKELPLLRQIDLVSCKIDNQTIKL 1759

Query: 519  LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
            L  SF     AL  I L++N + D+ A  +AQ L   +   +  ++L  N +T FG   L
Sbjct: 1760 LTSSFTRC-PALEVILLSWNLLGDEAAAELAQVLP--QMGRLKRVDLEKNQITAFGAWLL 1816

Query: 579  TDA 581
             + 
Sbjct: 1817 AEG 1819



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 5/216 (2%)

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DLG   +
Sbjct: 1503 SSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLL 1562

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG +G
Sbjct: 1563 NSSALTLLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAG 1622

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
             + +A +L     +  +DL  N +   G   LA+S  ++   L  + L  N + D  A  
Sbjct: 1623 VQHLATILPGLPELRKIDLSVNSISPAGGMQLAESL-ILCRHLEELMLGCNALGDPTALG 1681

Query: 548  IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            +A+ L  +  V    L+L  + L   G  +LT A D
Sbjct: 1682 LARELPQHLRV----LHLPFSHLGPGGALSLTQALD 1713



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 28/252 (11%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L G   +  L       GD    AL   L +  G+L +L +  + I+A+G  H+ + +
Sbjct: 680 EALVGCGQIENLSFKSRKCGDAFAEALSRSLPTM-GRLQMLGLAGSKITARGISHLVKAL 738

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
             C  L  ++   N + D+    I + L     +  +DL GN +       +ARV     
Sbjct: 739 PLCPQLEEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSGNIVCVSTLLCLARVAVTCP 798

Query: 444 VITSL-----DLAY----------------NPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            I +L     DL +                +   +DG +  ++         TL+L  CQ
Sbjct: 799 TIRTLQARKADLIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSL-----TLRLQKCQ 853

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +    AE +  +L+    +  +DL  N L DEG + +A++   ++ A   +DL+ N +  
Sbjct: 854 LQVHDAETLIALLQKGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIA-RKLDLSDNGLSL 912

Query: 543 DGAFAIAQALKA 554
            G   + +A+ A
Sbjct: 913 AGVHCVLRAVSA 924



 Score = 48.5 bits (114), Expect = 0.010,   Method: Composition-based stats.
 Identities = 91/454 (20%), Positives = 182/454 (40%), Gaps = 14/454 (3%)

Query: 142  FTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN 200
            FTG  L +E  ++L     + +  S VD+S    GD GL  L E L     +  +  + N
Sbjct: 1222 FTGCSLSQEHVESLCRLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPISGSLDLSHN 1281

Query: 201  GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
             ++          L S   ++  +++   +G E    +     D AG + L+LS    R 
Sbjct: 1282 SVSQESALYLVETLPSCPRVREASVN---LGSEQSFRIHFSKEDQAG-KTLRLSECSFRP 1337

Query: 261  EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
            E    +A  L  +  L  L L    +D      L   +   + + SL +   +    G  
Sbjct: 1338 EHVSRLATGLSQSLQLTELTLTQCCLDQEQLAILLSLVGRPAGLFSLRVQEPWADRAGIL 1397

Query: 321  ALAK-GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            +L +   + + S+ E+ +  +    +    L         +   L + +  +    +  V
Sbjct: 1398 SLLEVCAQASGSVTEISI--SKTQQQLCVQLEFPRQEENPEAVALRLAHCDLGTHHSLLV 1455

Query: 380  AEYIKNCKSLLWINLYMNDI---GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             + ++ C  L  ++L   ++    D+ +  + + L     + T  L  + + ++G + +A
Sbjct: 1456 GQLMETCARLQQLSLSQVNLCEDNDDSSLLLQNLLLSLSELKTFRLTSSCVSTEGLAHLA 1515

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
              L     +  LDL+ N    +G KAL   L+    +  L LG   + +S    +   L 
Sbjct: 1516 SGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALTLLTHGLS 1575

Query: 497  YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            +   +  L L+ N + D G   L+++ +    +L  +DL+ N+I D G   +A  L    
Sbjct: 1576 HMTRLQSLRLKRNSIGDVGCCHLSEALRAAT-SLEELDLSHNQIGDAGVQHLATILPGLP 1634

Query: 557  DVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
            +  +  ++L+ N ++  G   L ++  L   + E
Sbjct: 1635 E--LRKIDLSVNSISPAGGMQLAESLILCRHLEE 1666



 Score = 42.7 bits (99), Expect = 0.60,   Method: Composition-based stats.
 Identities = 73/324 (22%), Positives = 124/324 (38%), Gaps = 29/324 (8%)

Query: 251  LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL-HL 309
            L  S   L DEGA  +A+LL     L+ L L+ N +       LA      ST++ L HL
Sbjct: 1009 LDFSGNALGDEGATRLAQLLPGLGALQSLNLSENGLSLDAVLGLARCF---STLQWLFHL 1065

Query: 310  NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
            + ++       +    L G+K+ R++   G+S  D    A   G   R+     L +   
Sbjct: 1066 DISF------ESQHILLRGDKTGRDIRATGSS-PDFPAGAEFLGFR-RRCIPRSLRLSEC 1117

Query: 370  SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
             +      H+   +K C   L +              I D L +   ++ + L    +  
Sbjct: 1118 PLEPPSLTHLCATLKECPGPLELXXXXXXXXXXXXXXILDCLPRLPQLSLLQLNQTGLSP 1177

Query: 430  KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGN-----INTLKLGWCQI 483
            K    +A  L     +  +DL          ++L    L F  N     +   +   C +
Sbjct: 1178 KSPFLLANTLSLCPRVKKVDL----------RSLHHATLHFRSNEEQEGVCCGRFTGCSL 1227

Query: 484  GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
                 E +  +L     +S +DL AN L D G +CL +    V  +  S+DL+ N +  +
Sbjct: 1228 SQEHVESLCRLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPIS-GSLDLSHNSVSQE 1286

Query: 544  GAFAIAQALKANEDVAVTSLNLAN 567
             A  + + L +   V   S+NL +
Sbjct: 1287 SALYLVETLPSCPRVREASVNLGS 1310


>gi|345788194|ref|XP_542482.3| PREDICTED: LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing
            protein 14 [Canis lupus familiaris]
          Length = 1093

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 151/324 (46%), Gaps = 6/324 (1%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD+GVK LC+ L      ++ L L S  L      
Sbjct: 718  GCQDIASSLTHNQNLMHLDLKGSDIGDDGVKSLCEALKHPECKLQNLSLESCGLTTLCCL 777

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALA 323
             I++ L  +  LR L L+ N +   G   L EAL      +  L L        G   L+
Sbjct: 778  NISKALIRSQSLRFLNLSTNHLLDDGVKLLCEALGHPKCHLERLSLESCGLTVAGCEDLS 837

Query: 324  KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
              L  NK L  L L  N +GD+G++ +   L   + KL  L +     ++  + H++  +
Sbjct: 838  LALISNKRLTHLCLADNILGDDGVKLVNDALKHPQCKLQSLVLRRCHFTSLSSEHLSSAL 897

Query: 384  KNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDN 442
               KSL+ ++L  N I D+G + + DA +     +  ++L G  + S     +A  + +N
Sbjct: 898  LCNKSLIHLDLGSNWIQDDGIKLLCDAFRHPSCNLQDLELMGCVLTSMCCLDLASAILNN 957

Query: 443  SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG--WCQIGASGAEFVADMLRYNNT 500
            S + +LDL +N +  DG K L E L+ H N N  +LG  +C + +   + ++  LR N  
Sbjct: 958  SHLQNLDLGHNDLRDDGVKILCEALR-HPNCNIQRLGLEYCGLTSLCCQDLSYTLRSNQN 1016

Query: 501  ISILDLRANGLRDEGAKCLAQSFK 524
            +  ++L+ N L  EG   L +  K
Sbjct: 1017 LIKINLKQNTLGYEGMMKLCEVLK 1040



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 147/306 (48%), Gaps = 4/306 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD+G+  L E+L + +   + +S  + G+T          L  + +L+ LNL
Sbjct: 735  LDLKGSDIGDDGVKSLCEALKHPECKLQNLSLESCGLTTLCCLNISKALIRSQSLRFLNL 794

Query: 226  SGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GVK LC+ L      +ERL L S  L   G + ++  L +N  L  L L +N
Sbjct: 795  STNHLLDDGVKLLCEALGHPKCHLERLSLESCGLTVAGCEDLSLALISNKRLTHLCLADN 854

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   + +AL      ++SL L   +  +L +  L+  L  NKSL  L L  N I 
Sbjct: 855  ILGDDGVKLVNDALKHPQCKLQSLVLRRCHFTSLSSEHLSSALLCNKSLIHLDLGSNWIQ 914

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D+GI+ L          L  L++    +++     +A  I N   L  ++L  ND+ D+G
Sbjct: 915  DDGIKLLCDAFRHPSCNLQDLELMGCVLTSMCCLDLASAILNNSHLQNLDLGHNDLRDDG 974

Query: 404  AEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + +AL+  N  I  + L    + S     ++  L+ N  +  ++L  N +G +G   
Sbjct: 975  VKILCEALRHPNCNIQRLGLEYCGLTSLCCQDLSYTLRSNQNLIKINLKQNTLGYEGMMK 1034

Query: 463  LSEVLK 468
            L EVLK
Sbjct: 1035 LCEVLK 1040



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 148/324 (45%), Gaps = 42/324 (12%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEAL------LENSTIRSLHLNGNYGGALGA 319
           +  +L  N  LR L+L ++ +D     +  + L      L+   +R L   G      G 
Sbjct: 666 LCSVLHTNEHLRELDLCHSNLDELAMKTFYQELRHPNCKLQRLLMRFLSFPG------GC 719

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             +A  L  N++L  L L G+ IGD+G+++L   L   + KL  L + +  ++     ++
Sbjct: 720 QDIASSLTHNQNLMHLDLKGSDIGDDGVKSLCEALKHPECKLQNLSLESCGLTTLCCLNI 779

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARV 438
           ++ +   +SL ++NL  N + D+G + + +AL   +  +  + L    +   G   ++  
Sbjct: 780 SKALIRSQSLRFLNLSTNHLLDDGVKLLCEALGHPKCHLERLSLESCGLTVAGCEDLSLA 839

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRY 497
           L  N  +T L LA N +G DG K +++ LK     + +L L  C   +  +E ++  L  
Sbjct: 840 LISNKRLTHLCLADNILGDDGVKLVNDALKHPQCKLQSLVLRRCHFTSLSSEHLSSALLC 899

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFK----------------------------VVNEA 529
           N ++  LDL +N ++D+G K L  +F+                            + N  
Sbjct: 900 NKSLIHLDLGSNWIQDDGIKLLCDAFRHPSCNLQDLELMGCVLTSMCCLDLASAILNNSH 959

Query: 530 LTSIDLAFNEIRDDGAFAIAQALK 553
           L ++DL  N++RDDG   + +AL+
Sbjct: 960 LQNLDLGHNDLRDDGVKILCEALR 983



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 171/374 (45%), Gaps = 7/374 (1%)

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELL 270
             VL +N  L+ L+L  + + +  +K     L   N  ++RL +  +     G + IA  L
Sbjct: 668  SVLHTNEHLRELDLCHSNLDELAMKTFYQELRHPNCKLQRLLMRFLSFPG-GCQDIASSL 726

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN 329
             +N  L  L+L  + I   G  SL EAL      +++L L       L    ++K L  +
Sbjct: 727  THNQNLMHLDLKGSDIGDDGVKSLCEALKHPECKLQNLSLESCGLTTLCCLNISKALIRS 786

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SLR L+L  N + D+G++ L   L   K  L  L + +  ++  G   ++  + + K L
Sbjct: 787  QSLRFLNLSTNHLLDDGVKLLCEALGHPKCHLERLSLESCGLTVAGCEDLSLALISNKRL 846

Query: 390  LWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              + L  N +GD+G + + DALK  +  + ++ L   +  S  +  ++  L  N  +  L
Sbjct: 847  THLCLADNILGDDGVKLVNDALKHPQCKLQSLVLRRCHFTSLSSEHLSSALLCNKSLIHL 906

Query: 449  DLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            DL  N I  DG K L +  +    N+  L+L  C + +     +A  +  N+ +  LDL 
Sbjct: 907  DLGSNWIQDDGIKLLCDAFRHPSCNLQDLELMGCVLTSMCCLDLASAILNNSHLQNLDLG 966

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
             N LRD+G K L ++ +  N  +  + L +  +       ++  L++N++  +  +NL  
Sbjct: 967  HNDLRDDGVKILCEALRHPNCNIQRLGLEYCGLTSLCCQDLSYTLRSNQN--LIKINLKQ 1024

Query: 568  NFLTKFGQSALTDA 581
            N L   G   L + 
Sbjct: 1025 NTLGYEGMMKLCEV 1038


>gi|440911068|gb|ELR60794.1| hypothetical protein M91_01512, partial [Bos grunniens mutus]
          Length = 478

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 149/288 (51%), Gaps = 9/288 (3%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++  L L  N I +EGI +L+  L      L  +++
Sbjct: 93  INLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENY-YLQEMNV 151

Query: 367 GNNSISAKGAFHVAEYIKN-CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +N +  +GA  ++E+++N   SL  + L  N+  +E AE    AL  N  I ++DL  N
Sbjct: 152 SDNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               K    + ++L  N  + SLDL++N +   G  AL   L+ + ++  L L     G 
Sbjct: 212 KFCDKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + ++LR N+ ++ LDL +N + ++G   ++++ + +NE+L  + L  N I  DGA
Sbjct: 272 EGAAALGEVLRLNSYLTYLDLSSNNITNDGLSKISRALE-LNESLKVLKLFLNPISMDGA 330

Query: 546 FAIAQALKAN-----EDVAVTSLNLANNFLTKF-GQSALTDAKDLVYE 587
             +  ++K N     ED+ ++++ ++  F+    G  A+    D++Y+
Sbjct: 331 VLLILSIKRNPKSRMEDIDISNVLVSEQFVKILDGVCAIHPQLDVIYK 378



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 28/275 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     ++   +G+   G KA    L SN  + TL L+ N I +EG+  L ++L +N  +
Sbjct: 87  NMEESYINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + + +S  DL  EGA+ ++E L+NN+                           S++ SL 
Sbjct: 147 QEMNVSDNDLGLEGARILSEFLQNNT---------------------------SSLFSLQ 179

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+GN      A    + L  N  ++ L L  N   D+    L   L+   G L  LD+  
Sbjct: 180 LSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAGEYLGQMLAINVG-LQSLDLSW 238

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N +  +G   +   +++  SL  ++L MN  G+EGA  + + L+ N  +T +DL  NNI 
Sbjct: 239 NHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLRLNSYLTYLDLSSNNIT 298

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           + G S I+R L+ N  +  L L  NPI  DGA  L
Sbjct: 299 NDGLSKISRALELNESLKVLKLFLNPISMDGAVLL 333



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 148/299 (49%), Gaps = 5/299 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N T   +  A N I   GI +   +LQ N  L+ +N
Sbjct: 91  SYINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + L + L +N + +  LQLS  + ++E A+   + L NN  ++ L+L++
Sbjct: 151 VSDNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N         L + L  N  ++SL L+ N+    G  AL  GL  N SL++L L  NS G
Sbjct: 211 NKFCDKAGEYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  LD+ +N+I+  G   ++  ++  +SL  + L++N I  +G
Sbjct: 271 NEGAAALGEVL-RLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDG 329

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI-TSLDLAYNPIGADGAK 461
           A  +  ++K+N      D+  +N+    +    ++L     I   LD+ Y  + A  AK
Sbjct: 330 AVLLILSIKRNPKSRMEDIDISNVLV--SEQFVKILDGVCAIHPQLDVIYKSVQAPSAK 386



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 5/205 (2%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   +INL  + +G  G + IA AL  N T+ T++L  N I  +G  +
Sbjct: 77  GVVPVSYFIRNMEES-YINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCIMEEGILS 135

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVAD 493
           +  +L++N  +  ++++ N +G +GA+ LSE L+ +  ++ +L+L         AE    
Sbjct: 136 LVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQ 195

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L  N  I  LDL  N   D+  + L Q    +N  L S+DL++N +   G  A+   L+
Sbjct: 196 ALSNNYRIKSLDLSHNKFCDKAGEYLGQML-AINVGLQSLDLSWNHLYIRGVVALCNGLR 254

Query: 554 ANEDVAVTSLNLANNFLTKFGQSAL 578
           +N  V++  L+L+ N     G +AL
Sbjct: 255 SN--VSLKKLDLSMNSFGNEGAAAL 277



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 2/228 (0%)

Query: 149 ESKQTLNEFAKE-LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + L+EF +    +  S+ +SG NF +E      ++L  N   + +  + N       
Sbjct: 159 EGARILSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAG 218

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N+ L++L+LS N +   GV  LC+ L  N  +++L LS     +EGA A+ 
Sbjct: 219 EYLGQMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALG 278

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E+L+ NS L  L+L++N I   G + ++ AL  N +++ L L  N     GA  L   ++
Sbjct: 279 EVLRLNSYLTYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDGAVLLILSIK 338

Query: 328 GNKSLRELHLH-GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            N   R   +   N +  E    ++ G+ +   +L V+     + SAK
Sbjct: 339 RNPKSRMEDIDISNVLVSEQFVKILDGVCAIHPQLDVIYKSVQAPSAK 386


>gi|383422123|gb|AFH34275.1| protein NLRC5 [Macaca mulatta]
          Length = 1865

 Score =  103 bits (258), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 14/346 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1496 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1555

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L + +++ S  T L   L   + ++SL L  N  G +G   L++ L    SL EL L  N
Sbjct: 1556 LGHLLLNSSALTLLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHN 1615

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS  G   +AE +  C+ L  + L  N +G
Sbjct: 1616 QIGDAGVQHLATILPGLP-ELRKIDLSVNSISPAGGMQLAESLILCRHLEELMLGCNALG 1674

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++ + L  +  +  + LA N +     
Sbjct: 1675 DPTALGLARELPQH--LRVLHLPFSHLGPGGALSLTQALDGSPHLEEISLAENNLAGG-- 1730

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                 VL+F   +  L+   L  C+I     + +         + ++ L  N L DE A 
Sbjct: 1731 -----VLRFCKELPLLRQIDLVSCKIDNQTIKLLTSSFTRCPALEVILLSWNLLGDEAAA 1785

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
             LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1786 ELAQVLPQMGR-LKRVDLEKNQITAFGAWLLAEGLAQGSSIQVIRL 1830



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 94/341 (27%), Positives = 135/341 (39%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK--------------- 221
            EGL  LA  LG+    EE+  + N     G KA    L+    LK               
Sbjct: 1508 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALT 1567

Query: 222  -------------TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                         +L L  N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1568 LLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1627

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL---------------LENST---------- 303
            +L     LR ++L+ N I  +G   LAE+L               L + T          
Sbjct: 1628 ILPGLPELRKIDLSVNSISPAGGMQLAESLILCRHLEELMLGCNALGDPTALGLARELPQ 1687

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +L + L+G+  L E+ L  N++    +R        R+  L 
Sbjct: 1688 HLRVLHLPFSHLGPGGALSLTQALDGSPHLEEISLAENNLAGGVLRFCKELPLLRQIDLV 1747

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               I N +I       +      C +L  I L  N +GDE A ++A  L Q   +  +DL
Sbjct: 1748 SCKIDNQTIKL-----LTSSFTRCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDL 1802

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1803 EKNQITAFGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQRL 1843



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 96/363 (26%), Positives = 152/363 (41%), Gaps = 33/363 (9%)

Query: 246  AGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            A +++L LS V+L    D+ +  +  LL + S L+   L ++ +   G   LA  L    
Sbjct: 1462 ARLQQLSLSQVNLCEDNDDSSLLLQNLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCH 1521

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +  L L+ N     G  AL + LEG   L+ L L    +    +  L  GLS    +L 
Sbjct: 1522 HLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALTLLTHGLSHMT-RLQ 1580

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +  NSI   G  H++E ++   SL  ++L  N IGD G + +A  L     +  IDL
Sbjct: 1581 SLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDL 1640

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
              N+I   G   +A  L     +  L L  N +G   A  L+  L  H  +  L L +  
Sbjct: 1641 SVNSISPAGGMQLAESLILCRHLEELMLGCNALGDPTALGLARELPQH--LRVLHLPFSH 1698

Query: 483  IGASGA---------------------EFVADMLRYNNTISIL---DLRANGLRDEGAKC 518
            +G  GA                          +LR+   + +L   DL +  + ++  K 
Sbjct: 1699 LGPGGALSLTQALDGSPHLEEISLAENNLAGGVLRFCKELPLLRQIDLVSCKIDNQTIKL 1758

Query: 519  LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
            L  SF     AL  I L++N + D+ A  +AQ L   +   +  ++L  N +T FG   L
Sbjct: 1759 LTSSFTRC-PALEVILLSWNLLGDEAAAELAQVLP--QMGRLKRVDLEKNQITAFGAWLL 1815

Query: 579  TDA 581
             + 
Sbjct: 1816 AEG 1818



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 5/216 (2%)

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DLG   +
Sbjct: 1502 SSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLL 1561

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG +G
Sbjct: 1562 NSSALTLLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAG 1621

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
             + +A +L     +  +DL  N +   G   LA+S  ++   L  + L  N + D  A  
Sbjct: 1622 VQHLATILPGLPELRKIDLSVNSISPAGGMQLAESL-ILCRHLEELMLGCNALGDPTALG 1680

Query: 548  IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            +A+ L  +  V    L+L  + L   G  +LT A D
Sbjct: 1681 LARELPQHLRV----LHLPFSHLGPGGALSLTQALD 1712



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 28/252 (11%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L G   +  L       GD    AL   L +  G+L +L +  + I+A+G  H+ + +
Sbjct: 680 EALVGCGQIENLSFKSRKCGDAFAEALSRSLPTM-GRLQMLGLAGSKITARGISHLVKAL 738

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
             C  L  ++   N + D+    I + L     +  +DL GN++       +ARV     
Sbjct: 739 PLCPQLEEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSGNSVCVSTLLCLARVAVTCP 798

Query: 444 VITSL-----DLAY----------------NPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            I +L     DL +                +   +DG +  ++         TL+L  CQ
Sbjct: 799 TIRTLQARKADLIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSL-----TLRLQKCQ 853

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +    AE +  +L+    +  +DL  N L DEG + +A++   ++ A   +DL+ N +  
Sbjct: 854 LQVHDAETLIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIA-RKLDLSDNGLSL 912

Query: 543 DGAFAIAQALKA 554
            G   + +A+ A
Sbjct: 913 AGVHCVLRAVSA 924



 Score = 50.8 bits (120), Expect = 0.002,   Method: Composition-based stats.
 Identities = 92/455 (20%), Positives = 183/455 (40%), Gaps = 14/455 (3%)

Query: 141  GFTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA 199
            GFTG  L +E  ++L     + +  S VD+S    GD GL  L E L     +  +  + 
Sbjct: 1220 GFTGCSLSQEHVESLCRLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPISGSLDLSH 1279

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N ++          L S   ++  +++   +G E    +     D AG + L+LS    R
Sbjct: 1280 NSVSQESALYLVETLPSCPRVREASVN---LGSEQSFRIHFSKEDQAG-KTLRLSECSFR 1335

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
             E    +A  L  +  L  L L    +D      L   +   + + SL +   +    G 
Sbjct: 1336 PEHVSRLATGLSQSLQLTELTLTQCCLDQEQLAILLSLVGRPAGLFSLRVQEPWADRAGI 1395

Query: 320  NALAK-GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             +L +   + + S+ E+ +  +    +    L         +   L + +  +    +  
Sbjct: 1396 LSLLEVCAQASGSVTEISI--SKTQQQLCVQLEFPRQEENPEAVALRLAHCDLGTHHSLL 1453

Query: 379  VAEYIKNCKSLLWINLYMNDI---GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
            V + ++ C  L  ++L   ++    D+ +  + + L     + T  L  + + ++G + +
Sbjct: 1454 VGQLMETCARLQQLSLSQVNLCEDNDDSSLLLQNLLLSLSELKTFRLTSSCVSTEGLAHL 1513

Query: 436  ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
            A  L     +  LDL+ N    +G KAL   L+    +  L LG   + +S    +   L
Sbjct: 1514 ASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALTLLTHGL 1573

Query: 496  RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             +   +  L L+ N + D G   L+++ +    +L  +DL+ N+I D G   +A  L   
Sbjct: 1574 SHMTRLQSLRLKRNSIGDVGCCHLSEALRAAT-SLEELDLSHNQIGDAGVQHLATILPGL 1632

Query: 556  EDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
             +  +  ++L+ N ++  G   L ++  L   + E
Sbjct: 1633 PE--LRKIDLSVNSISPAGGMQLAESLILCRHLEE 1665



 Score = 48.9 bits (115), Expect = 0.007,   Method: Composition-based stats.
 Identities = 75/323 (23%), Positives = 127/323 (39%), Gaps = 28/323 (8%)

Query: 251  LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL-HL 309
            L  S   L DEGA  +A+LL     L+ L L+ N +       LA      ST++ L HL
Sbjct: 1009 LDFSGNALGDEGATRLAQLLPGLGALQSLNLSENGLSLDAVLGLARCF---STLQWLFHL 1065

Query: 310  NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
            + ++       +    L G+K+ R++   G+S  D    A   G   R+     L +   
Sbjct: 1066 DISF------ESQHILLRGDKTGRDIWATGSS-PDFPAGAEFLGFR-RRCIPRSLRLSEC 1117

Query: 370  SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
             +      H+   +K C   L + L    + D+  E + D L +   ++ + L    +  
Sbjct: 1118 PLEPPSLTHLCATLKECPGPLELQLSCEFLSDQSLETLLDCLPRLPQLSLLQLNQTGLSP 1177

Query: 430  KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINT----LKLGWCQIG 484
            K    +A  L     +  +DL          ++L    L F  N            C + 
Sbjct: 1178 KSPFLLANTLSLCPRVKKVDL----------RSLHHATLHFRSNEEQEGVCCGFTGCSLS 1227

Query: 485  ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
                E +  +L     +S +DL AN L D G +CL +    V  +  S+DL+ N +  + 
Sbjct: 1228 QEHVESLCRLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPIS-GSLDLSHNSVSQES 1286

Query: 545  AFAIAQALKANEDVAVTSLNLAN 567
            A  + + L +   V   S+NL +
Sbjct: 1287 ALYLVETLPSCPRVREASVNLGS 1309



 Score = 48.1 bits (113), Expect = 0.013,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 28/253 (11%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            ++L LS  P+    +  LC  L +  G   LQLS   L D+  + + + L     L +L+
Sbjct: 1110 RSLRLSECPLEPPSLTHLCATLKECPGPLELQLSCEFLSDQSLETLLDCLPRLPQLSLLQ 1169

Query: 281  LNNNMIDYSGFTSLAEAL-----LENSTIRSLH---------------LNGNYGGALG-- 318
            LN   +       LA  L     ++   +RSLH                 G  G +L   
Sbjct: 1170 LNQTGLSPKSPFLLANTLSLCPRVKKVDLRSLHHATLHFRSNEEQEGVCCGFTGCSLSQE 1229

Query: 319  -ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
               +L + L   K L ++ L  N +GD G+R L+  L         LD+ +NS+S + A 
Sbjct: 1230 HVESLCRLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPIS-GSLDLSHNSVSQESAL 1288

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            ++ E + +C  +   ++   ++G E + +I  + K+++   T+ L   +   +  S +A 
Sbjct: 1289 YLVETLPSCPRVREASV---NLGSEQSFRIHFS-KEDQAGKTLRLSECSFRPEHVSRLAT 1344

Query: 438  VLKDNSVITSLDL 450
             L  +  +T L L
Sbjct: 1345 GLSQSLQLTELTL 1357



 Score = 44.7 bits (104), Expect = 0.13,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 87/224 (38%), Gaps = 19/224 (8%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G      G+  L ++L      EEVSF  N ++   +     VL     L+ L+LSGN
Sbjct: 721 LAGSKITARGISHLVKALPLCPQLEEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSGN 780

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVD---LRDEGAKAIAELLKNNSILRVLELNNNM 285
            +    + CL  + V    +  LQ    D   L     +  AEL       R  +L  + 
Sbjct: 781 SVCVSTLLCLARVAVTCPTIRTLQARKADLIFLLSPPTETTAEL------QRAPDLQESD 834

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G  S +  L        +H          A  L   L+    L E+ L GN + DE
Sbjct: 835 GQRKGAQSRSLTLRLQKCQLQVH---------DAETLIALLQEGPHLEEVDLSGNQLEDE 885

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           G R LM+  +S+      LD+ +N +S  G   V   +  C +L
Sbjct: 886 GCR-LMAEAASQLHIARKLDLSDNGLSLAGVHCVLRAVSACWTL 928


>gi|355710224|gb|EHH31688.1| Nucleotide-binding oligomerization domain protein 4 [Macaca mulatta]
          Length = 1866

 Score =  103 bits (258), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 14/346 (4%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1497 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1556

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L + +++ S  T L   L   + ++SL L  N  G +G   L++ L    SL EL L  N
Sbjct: 1557 LGHLLLNSSALTLLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS  G   +AE +  C+ L  + L  N +G
Sbjct: 1617 QIGDAGVQHLATILPGLP-ELRKIDLSVNSISPAGGMQLAESLILCRHLEELMLGCNALG 1675

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++ + L  +  +  + LA N +     
Sbjct: 1676 DPTALGLARELPQH--LRVLHLPFSHLGPGGALSLTQALDGSPHLEEISLAENNLAGG-- 1731

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                 VL+F   +  L+   L  C+I     + +         + ++ L  N L DE A 
Sbjct: 1732 -----VLRFCKELPLLRQIDLVSCKIDNQTIKLLTSSFTRCPALEVILLSWNLLGDEAAA 1786

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
             LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1787 ELAQVLPQMGR-LKRVDLEKNQITAFGAWLLAEGLAQGSSIQVIRL 1831



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 94/341 (27%), Positives = 135/341 (39%), Gaps = 59/341 (17%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK--------------- 221
            EGL  LA  LG+    EE+  + N     G KA    L+    LK               
Sbjct: 1509 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALT 1568

Query: 222  -------------TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                         +L L  N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1569 LLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEAL---------------LENST---------- 303
            +L     LR ++L+ N I  +G   LAE+L               L + T          
Sbjct: 1629 ILPGLPELRKIDLSVNSISPAGGMQLAESLILCRHLEELMLGCNALGDPTALGLARELPQ 1688

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +R LHL  ++ G  GA +L + L+G+  L E+ L  N++    +R        R+  L 
Sbjct: 1689 HLRVLHLPFSHLGPGGALSLTQALDGSPHLEEISLAENNLAGGVLRFCKELPLLRQIDLV 1748

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               I N +I       +      C +L  I L  N +GDE A ++A  L Q   +  +DL
Sbjct: 1749 SCKIDNQTIKL-----LTSSFTRCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDL 1803

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
              N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1804 EKNQITAFGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQRL 1844



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 96/363 (26%), Positives = 152/363 (41%), Gaps = 33/363 (9%)

Query: 246  AGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            A +++L LS V+L    D+ +  +  LL + S L+   L ++ +   G   LA  L    
Sbjct: 1463 ARLQQLSLSQVNLCEDNDDSSLLLQNLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCH 1522

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +  L L+ N     G  AL + LEG   L+ L L    +    +  L  GLS    +L 
Sbjct: 1523 HLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALTLLTHGLSHMT-RLQ 1581

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +  NSI   G  H++E ++   SL  ++L  N IGD G + +A  L     +  IDL
Sbjct: 1582 SLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDL 1641

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
              N+I   G   +A  L     +  L L  N +G   A  L+  L  H  +  L L +  
Sbjct: 1642 SVNSISPAGGMQLAESLILCRHLEELMLGCNALGDPTALGLARELPQH--LRVLHLPFSH 1699

Query: 483  IGASGA---------------------EFVADMLRYNNTISIL---DLRANGLRDEGAKC 518
            +G  GA                          +LR+   + +L   DL +  + ++  K 
Sbjct: 1700 LGPGGALSLTQALDGSPHLEEISLAENNLAGGVLRFCKELPLLRQIDLVSCKIDNQTIKL 1759

Query: 519  LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
            L  SF     AL  I L++N + D+ A  +AQ L   +   +  ++L  N +T FG   L
Sbjct: 1760 LTSSFTRC-PALEVILLSWNLLGDEAAAELAQVLP--QMGRLKRVDLEKNQITAFGAWLL 1816

Query: 579  TDA 581
             + 
Sbjct: 1817 AEG 1819



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 5/216 (2%)

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DLG   +
Sbjct: 1503 SSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLL 1562

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG +G
Sbjct: 1563 NSSALTLLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAG 1622

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
             + +A +L     +  +DL  N +   G   LA+S  ++   L  + L  N + D  A  
Sbjct: 1623 VQHLATILPGLPELRKIDLSVNSISPAGGMQLAESL-ILCRHLEELMLGCNALGDPTALG 1681

Query: 548  IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            +A+ L  +  V    L+L  + L   G  +LT A D
Sbjct: 1682 LARELPQHLRV----LHLPFSHLGPGGALSLTQALD 1713



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 28/252 (11%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L G   +  L       GD    AL   L +  G+L +L +  + I+A+G  H+ + +
Sbjct: 680 EALVGCGQIENLSFKSRKCGDAFAEALSRSLPTM-GRLQMLGLAGSKITARGISHLVKAL 738

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
             C  L  ++   N + D+    I + L     +  +DL GN++       +ARV     
Sbjct: 739 PLCPQLEEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSGNSVCVSTLLCLARVAVTCP 798

Query: 444 VITSL-----DLAY----------------NPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            I +L     DL +                +   +DG +  ++         TL+L  CQ
Sbjct: 799 TIRTLQARKADLIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSL-----TLRLQKCQ 853

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +    AE +  +L+    +  +DL  N L DEG + +A++   ++ A   +DL+ N +  
Sbjct: 854 LQVHDAETLIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIA-RKLDLSDNGLSL 912

Query: 543 DGAFAIAQALKA 554
            G   + +A+ A
Sbjct: 913 AGVHCVLRAVSA 924



 Score = 50.4 bits (119), Expect = 0.003,   Method: Composition-based stats.
 Identities = 75/324 (23%), Positives = 129/324 (39%), Gaps = 29/324 (8%)

Query: 251  LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL-HL 309
            L  S   L DEGA  +A+LL     L+ L L+ N +       LA      ST++ L HL
Sbjct: 1009 LDFSGNALGDEGATRLAQLLPGLGALQSLNLSENGLSLDAVLGLARCF---STLQWLFHL 1065

Query: 310  NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
            + ++       +    L G+K+ R++   G+S  D    A   G   R+     L +   
Sbjct: 1066 DISF------ESQHILLRGDKTGRDIWATGSS-PDFPAGAEFLGFR-RRCIPRSLRLSEC 1117

Query: 370  SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
             +      H+   +K C   L + L    + D+  E + D L +   ++ + L    +  
Sbjct: 1118 PLEPPSLTHLCATLKECPGPLELQLSCEFLSDQSLETLLDCLPRLPQLSLLQLNQTGLSP 1177

Query: 430  KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGN-----INTLKLGWCQI 483
            K    +A  L     +  +DL          ++L    L F  N     +   +   C +
Sbjct: 1178 KSPFLLANTLSLCPRVKKVDL----------RSLHHATLHFRSNEEQEGVCCGRFTGCSL 1227

Query: 484  GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
                 E +  +L     +S +DL AN L D G +CL +    V  +  S+DL+ N +  +
Sbjct: 1228 SQEHVESLCRLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPIS-GSLDLSHNSVSQE 1286

Query: 544  GAFAIAQALKANEDVAVTSLNLAN 567
             A  + + L +   V   S+NL +
Sbjct: 1287 SALYLVETLPSCPRVREASVNLGS 1310



 Score = 48.1 bits (113), Expect = 0.011,   Method: Composition-based stats.
 Identities = 91/454 (20%), Positives = 182/454 (40%), Gaps = 14/454 (3%)

Query: 142  FTG-KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN 200
            FTG  L +E  ++L     + +  S VD+S    GD GL  L E L     +  +  + N
Sbjct: 1222 FTGCSLSQEHVESLCRLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPISGSLDLSHN 1281

Query: 201  GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
             ++          L S   ++  +++   +G E    +     D AG + L+LS    R 
Sbjct: 1282 SVSQESALYLVETLPSCPRVREASVN---LGSEQSFRIHFSKEDQAG-KTLRLSECSFRP 1337

Query: 261  EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
            E    +A  L  +  L  L L    +D      L   +   + + SL +   +    G  
Sbjct: 1338 EHVSRLATGLSQSLQLTELTLTQCCLDQEQLAILLSLVGRPAGLFSLRVQEPWADRAGIL 1397

Query: 321  ALAK-GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            +L +   + + S+ E+ +  +    +    L         +   L + +  +    +  V
Sbjct: 1398 SLLEVCAQASGSVTEISI--SKTQQQLCVQLEFPRQEENPEAVALRLAHCDLGTHHSLLV 1455

Query: 380  AEYIKNCKSLLWINLYMNDI---GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             + ++ C  L  ++L   ++    D+ +  + + L     + T  L  + + ++G + +A
Sbjct: 1456 GQLMETCARLQQLSLSQVNLCEDNDDSSLLLQNLLLSLSELKTFRLTSSCVSTEGLAHLA 1515

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
              L     +  LDL+ N    +G KAL   L+    +  L LG   + +S    +   L 
Sbjct: 1516 SGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALTLLTHGLS 1575

Query: 497  YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            +   +  L L+ N + D G   L+++ +    +L  +DL+ N+I D G   +A  L    
Sbjct: 1576 HMTRLQSLRLKRNSIGDVGCCHLSEALRAAT-SLEELDLSHNQIGDAGVQHLATILPGLP 1634

Query: 557  DVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSE 590
            +  +  ++L+ N ++  G   L ++  L   + E
Sbjct: 1635 E--LRKIDLSVNSISPAGGMQLAESLILCRHLEE 1666



 Score = 47.0 bits (110), Expect = 0.027,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 29/254 (11%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            ++L LS  P+    +  LC  L +  G   LQLS   L D+  + + + L     L +L+
Sbjct: 1110 RSLRLSECPLEPPSLTHLCATLKECPGPLELQLSCEFLSDQSLETLLDCLPRLPQLSLLQ 1169

Query: 281  LNNNMIDYSGFTSLAEAL-----LENSTIRSLH---------------LNGNYGGAL--- 317
            LN   +       LA  L     ++   +RSLH                 G + G     
Sbjct: 1170 LNQTGLSPKSPFLLANTLSLCPRVKKVDLRSLHHATLHFRSNEEQEGVCCGRFTGCSLSQ 1229

Query: 318  -GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                +L + L   K L ++ L  N +GD G+R L+  L         LD+ +NS+S + A
Sbjct: 1230 EHVESLCRLLSKCKDLSQVDLSANLLGDSGLRCLLECLPQVPIS-GSLDLSHNSVSQESA 1288

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             ++ E + +C  +   ++   ++G E + +I  + K+++   T+ L   +   +  S +A
Sbjct: 1289 LYLVETLPSCPRVREASV---NLGSEQSFRIHFS-KEDQAGKTLRLSECSFRPEHVSRLA 1344

Query: 437  RVLKDNSVITSLDL 450
              L  +  +T L L
Sbjct: 1345 TGLSQSLQLTELTL 1358



 Score = 44.7 bits (104), Expect = 0.13,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 87/224 (38%), Gaps = 19/224 (8%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G      G+  L ++L      EEVSF  N ++   +     VL     L+ L+LSGN
Sbjct: 721 LAGSKITARGISHLVKALPLCPQLEEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSGN 780

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVD---LRDEGAKAIAELLKNNSILRVLELNNNM 285
            +    + CL  + V    +  LQ    D   L     +  AEL       R  +L  + 
Sbjct: 781 SVCVSTLLCLARVAVTCPTIRTLQARKADLIFLLSPPTETTAEL------QRAPDLQESD 834

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G  S +  L        +H          A  L   L+    L E+ L GN + DE
Sbjct: 835 GQRKGAQSRSLTLRLQKCQLQVH---------DAETLIALLQEGPHLEEVDLSGNQLEDE 885

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           G R LM+  +S+      LD+ +N +S  G   V   +  C +L
Sbjct: 886 GCR-LMAEAASQLHIARKLDLSDNGLSLAGVHCVLRAVSACWTL 928


>gi|432091961|gb|ELK24767.1| NACHT, LRR and PYD domains-containing protein 14 [Myotis davidii]
          Length = 547

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 132/266 (49%), Gaps = 4/266 (1%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G    A  L  N++L  L L G+ IGD G+++L   L     KL  L + + S++     
Sbjct: 171 GCQNFANCLIHNQNLLHLDLKGSDIGDGGVKSLCEALRHPDCKLQNLSLESCSLTTLCCL 230

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIA 436
           ++++ +    SL+++NL  N+I D+G E + +AL+  N  +  + L    +   G   ++
Sbjct: 231 NISKILIRSHSLIFLNLSTNNILDDGVELLCEALRHPNCHLERLSLESCGLTVAGCEDLS 290

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADML 495
             L +N  +T L LA N +G  G K LS+VLK     + +L L  C   +   E ++  L
Sbjct: 291 LALINNKGLTHLCLADNILGDGGVKLLSDVLKHPQCTLQSLVLRRCHFTSGSCEHLSSSL 350

Query: 496 RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           R N +++ LDL +N L+D+GAK L   F+    +L  + L    +       +A A+  N
Sbjct: 351 RSNKSLTHLDLASNQLQDDGAKLLCDVFRHPGCSLQDLQLMGCVLTSACCLDLASAILNN 410

Query: 556 EDVAVTSLNLANNFLTKFGQSALTDA 581
            +  + SL+L NN L   G   L +A
Sbjct: 411 PN--LRSLDLGNNDLQDDGVKILCEA 434



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 149/326 (45%), Gaps = 6/326 (1%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEG 262
           A G + F   L  N  L  L+L G+ IGD GVK LC+ L   +  ++ L L S  L    
Sbjct: 169 ADGCQNFANCLIHNQNLLHLDLKGSDIGDGGVKSLCEALRHPDCKLQNLSLESCSLTTLC 228

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA 321
              I+++L  +  L  L L+ N I   G   L EAL   N  +  L L        G   
Sbjct: 229 CLNISKILIRSHSLIFLNLSTNNILDDGVELLCEALRHPNCHLERLSLESCGLTVAGCED 288

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           L+  L  NK L  L L  N +GD G++ L   L   +  L  L +     ++    H++ 
Sbjct: 289 LSLALINNKGLTHLCLADNILGDGGVKLLSDVLKHPQCTLQSLVLRRCHFTSGSCEHLSS 348

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLK 440
            +++ KSL  ++L  N + D+GA+ + D  +    ++  + L G  + S     +A  + 
Sbjct: 349 SLRSNKSLTHLDLASNQLQDDGAKLLCDVFRHPGCSLQDLQLMGCVLTSACCLDLASAIL 408

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG--WCQIGASGAEFVADMLRYN 498
           +N  + SLDL  N +  DG K L E L+ H N N  +LG  +C + +   + ++  L  N
Sbjct: 409 NNPNLRSLDLGNNDLQDDGVKILCEALR-HPNCNIQRLGLEYCGLTSLCCQDLSSTLSSN 467

Query: 499 NTISILDLRANGLRDEGAKCLAQSFK 524
             +  ++L  N L  EG K L +  +
Sbjct: 468 QRLIKMNLVQNTLGCEGIKKLCEVLR 493



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 150/324 (46%), Gaps = 5/324 (1%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGA 319
           +G +  A  L +N  L  L+L  + I   G  SL EAL   +  +++L L       L  
Sbjct: 170 DGCQNFANCLIHNQNLLHLDLKGSDIGDGGVKSLCEALRHPDCKLQNLSLESCSLTTLCC 229

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             ++K L  + SL  L+L  N+I D+G+  L   L      L  L + +  ++  G   +
Sbjct: 230 LNISKILIRSHSLIFLNLSTNNILDDGVELLCEALRHPNCHLERLSLESCGLTVAGCEDL 289

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARV 438
           +  + N K L  + L  N +GD G + ++D LK  + T+ ++ L   +  S     ++  
Sbjct: 290 SLALINNKGLTHLCLADNILGDGGVKLLSDVLKHPQCTLQSLVLRRCHFTSGSCEHLSSS 349

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRY 497
           L+ N  +T LDLA N +  DGAK L +V +  G ++  L+L  C + ++    +A  +  
Sbjct: 350 LRSNKSLTHLDLASNQLQDDGAKLLCDVFRHPGCSLQDLQLMGCVLTSACCLDLASAILN 409

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
           N  +  LDL  N L+D+G K L ++ +  N  +  + L +  +       ++  L +N+ 
Sbjct: 410 NPNLRSLDLGNNDLQDDGVKILCEALRHPNCNIQRLGLEYCGLTSLCCQDLSSTLSSNQ- 468

Query: 558 VAVTSLNLANNFLTKFGQSALTDA 581
             +  +NL  N L   G   L + 
Sbjct: 469 -RLIKMNLVQNTLGCEGIKKLCEV 491



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 3/249 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           +++S  N  D+G+  L E+L + N   E +S  + G+T AG +     L +N  L  L L
Sbjct: 245 LNLSTNNILDDGVELLCEALRHPNCHLERLSLESCGLTVAGCEDLSLALINNKGLTHLCL 304

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           + N +GD GVK L D+L      ++ L L          + ++  L++N  L  L+L +N
Sbjct: 305 ADNILGDGGVKLLSDVLKHPQCTLQSLVLRRCHFTSGSCEHLSSSLRSNKSLTHLDLASN 364

Query: 285 MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +   G   L +       +++ L L G    +     LA  +  N +LR L L  N + 
Sbjct: 365 QLQDDGAKLLCDVFRHPGCSLQDLQLMGCVLTSACCLDLASAILNNPNLRSLDLGNNDLQ 424

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D+G++ L   L      +  L +    +++     ++  + + + L+ +NL  N +G EG
Sbjct: 425 DDGVKILCEALRHPNCNIQRLGLEYCGLTSLCCQDLSSTLSSNQRLIKMNLVQNTLGCEG 484

Query: 404 AEKIADALK 412
            +K+ + L+
Sbjct: 485 IKKLCEVLR 493


>gi|320165382|gb|EFW42281.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 398

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 106/198 (53%), Gaps = 1/198 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L L  N I D G + + + L  N  +  L L    + D GA+AIAE LK N+ L+ L L 
Sbjct: 19  LILHQNQIDDAGAQVIAEALRVNTALTGLNLPQNQIGDAGARAIAEALKVNTTLKELNLR 78

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I  +G  ++AEAL  N+T+  L L  N  G  GA A+A+ L  NK+L+EL+L+ N I
Sbjct: 79  ENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTLKELYLYQNQI 138

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            D G  A+   L   K  L  LD+  N I   GA  +AE +   K L W+++  N IG  
Sbjct: 139 DDAGAHAIAEALKVNK-TLEKLDLRGNQIGDIGAQAIAEALMVNKQLWWLDIRFNFIGKA 197

Query: 403 GAEKIADALKQNRTITTI 420
           G + I +A + NR + T+
Sbjct: 198 GLQAIGEARQVNRILKTL 215



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 110/192 (57%), Gaps = 1/192 (0%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +  N I   GA  +AE ++   +L  +NL  N IGD GA  IA+ALK N T+  ++L 
Sbjct: 19  LILHQNQIDDAGAQVIAEALRVNTALTGLNLPQNQIGDAGARAIAEALKVNTTLKELNLR 78

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I + GA AIA  LK N+ +  L L  N IG  GA+A++E L+ +  +  L L   QI
Sbjct: 79  ENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTLKELYLYQNQI 138

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             +GA  +A+ L+ N T+  LDLR N + D GA+ +A++  +VN+ L  +D+ FN I   
Sbjct: 139 DDAGAHAIAEALKVNKTLEKLDLRGNQIGDIGAQAIAEAL-MVNKQLWWLDIRFNFIGKA 197

Query: 544 GAFAIAQALKAN 555
           G  AI +A + N
Sbjct: 198 GLQAIGEARQVN 209



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 92/178 (51%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
              D G   +AE+L  N     ++   N I  AG +A    L+ N  LK LNL  N IG 
Sbjct: 25  QIDDAGAQVIAEALRVNTALTGLNLPQNQIGDAGARAIAEALKVNTTLKELNLRENQIGA 84

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + + + L  N  +  L L    + D GA+AIAE L+ N  L+ L L  N ID +G  
Sbjct: 85  AGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTLKELYLYQNQIDDAGAH 144

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           ++AEAL  N T+  L L GN  G +GA A+A+ L  NK L  L +  N IG  G++A+
Sbjct: 145 AIAEALKVNKTLEKLDLRGNQIGDIGAQAIAEALMVNKQLWWLDIRFNFIGKAGLQAI 202



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 113/226 (50%), Gaps = 8/226 (3%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L LH N I D G + +   L      L  L++  N I   GA  +AE +K   +L  +NL
Sbjct: 19  LILHQNQIDDAGAQVIAEALRVNTA-LTGLNLPQNQIGDAGARAIAEALKVNTTLKELNL 77

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N IG  GA+ IA+ALK N T+  + L  N I   GA AIA  L++N  +  L L  N 
Sbjct: 78  RENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTLKELYLYQNQ 137

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           I   GA A++E LK +  +  L L   QIG  GA+ +A+ L  N  +  LD+R N +   
Sbjct: 138 IDDAGAHAIAEALKVNKTLEKLDLRGNQIGDIGAQAIAEALMVNKQLWWLDIRFNFIGKA 197

Query: 515 GAKCLAQSFKVVNEALTS--IDLAFNEIRDDGAFAIAQALKANEDV 558
           G + + ++ + VN  L +  ID   N +    AF++   L   ED+
Sbjct: 198 GLQAIGEA-RQVNRILKTLLIDKQINPL----AFSLLPRLATAEDL 238



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 90/173 (52%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A + +++     GD G   +AE+L  N T +E++   N I AAG +A    L+ N  L  
Sbjct: 43  ALTGLNLPQNQIGDAGARAIAEALKVNTTLKELNLRENQIGAAGAQAIAEALKVNTTLAV 102

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  N IGD G + + + L +N  ++ L L    + D GA AIAE LK N  L  L+L 
Sbjct: 103 LSLYQNQIGDAGAQAIAEALRENKTLKELYLYQNQIDDAGAHAIAEALKVNKTLEKLDLR 162

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            N I   G  ++AEAL+ N  +  L +  N+ G  G  A+ +  + N+ L+ L
Sbjct: 163 GNQIGDIGAQAIAEALMVNKQLWWLDIRFNFIGKAGLQAIGEARQVNRILKTL 215



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 12/132 (9%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             GD G   +AE+L  N+T +E+    N I  AG  A    L+ N  L+ L+L GN IGD
Sbjct: 109 QIGDAGAQAIAEALRENKTLKELYLYQNQIDDAGAHAIAEALKVNKTLEKLDLRGNQIGD 168

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNSILRVLELNN--NM 285
            G + + + L+ N      QL  +D+R       G +AI E  + N IL+ L ++   N 
Sbjct: 169 IGAQAIAEALMVNK-----QLWWLDIRFNFIGKAGLQAIGEARQVNRILKTLLIDKQINP 223

Query: 286 IDYSGFTSLAEA 297
           + +S    LA A
Sbjct: 224 LAFSLLPRLATA 235


>gi|297284079|ref|XP_001095341.2| PREDICTED: protein NLRC5 [Macaca mulatta]
          Length = 1730

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 158/343 (46%), Gaps = 8/343 (2%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L LS+    +EG KA+   L+   +L+ L+
Sbjct: 1361 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLD 1420

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L + +++ S  T L   L   + ++SL L  N  G +G   L++ L    SL EL L  N
Sbjct: 1421 LGHLLLNSSALTLLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHN 1480

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS  G   +AE +  C+ L  + L  N +G
Sbjct: 1481 QIGDAGVQHLATILPGLP-ELRKIDLSVNSISPAGGMQLAESLILCRHLEELMLGCNALG 1539

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++ + L  +  +  + LA N + A G 
Sbjct: 1540 DPTALGLARELPQH--LRVLHLPFSHLGPGGALSLTQALDGSPHLEEISLAENNL-AGGV 1596

Query: 461  KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
                + L     I+ +    C+I     + +         + ++ L  N L DE A  LA
Sbjct: 1597 LHFCKELPLLRQIDLVS---CKIDNQTIKLLTSSFTRCPALEVILLSWNLLGDEAAAELA 1653

Query: 521  QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
            Q    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1654 QVLPQMGR-LKRVDLEKNQITAFGAWLLAEGLAQGSSIQVIRL 1695



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 133/340 (39%), Gaps = 57/340 (16%)

Query: 177  EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK--------------- 221
            EGL  LA  LG+    EE+  + N     G KA    L+    LK               
Sbjct: 1373 EGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALT 1432

Query: 222  -------------TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                         +L L  N IGD G   L + L     +E L LS   + D G + +A 
Sbjct: 1433 LLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1492

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            +L     LR ++L+ N I  +G   LAE+L+    +  L L  N  G   A  LA+ L  
Sbjct: 1493 ILPGLPELRKIDLSVNSISPAGGMQLAESLILCRHLEELMLGCNALGDPTALGLARELP- 1551

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK---- 384
             + LR LHL  + +G  G  +L   L      L  + +  N++ A G  H  + +     
Sbjct: 1552 -QHLRVLHLPFSHLGPGGALSLTQALDGSP-HLEEISLAENNL-AGGVLHFCKELPLLRQ 1608

Query: 385  ---------------------NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
                                  C +L  I L  N +GDE A ++A  L Q   +  +DL 
Sbjct: 1609 IDLVSCKIDNQTIKLLTSSFTRCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDLE 1668

Query: 424  GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             N I + GA  +A  L   S I  + L  NPI  D A+ L
Sbjct: 1669 KNQITAFGAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQRL 1708



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 149/356 (41%), Gaps = 33/356 (9%)

Query: 246  AGVERLQLSSVDL---RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            A +++L LS V+L    D+ +  +  LL + S L+   L ++ +   G   LA  L    
Sbjct: 1327 ARLQQLSLSQVNLCEDNDDSSLLLQNLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCH 1386

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             +  L L+ N     G  AL + LEG   L+ L L    +    +  L  GL S   +L 
Sbjct: 1387 HLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHLLLNSSALTLLTHGL-SHMTRLQ 1445

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +  NSI   G  H++E ++   SL  ++L  N IGD G + +A  L     +  IDL
Sbjct: 1446 SLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDL 1505

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
              N+I   G   +A  L     +  L L  N +G   A  L+  L  H  +  L L +  
Sbjct: 1506 SVNSISPAGGMQLAESLILCRHLEELMLGCNALGDPTALGLARELPQH--LRVLHLPFSH 1563

Query: 483  IGASGA---------------------EFVADMLRYNNTISIL---DLRANGLRDEGAKC 518
            +G  GA                          +L +   + +L   DL +  + ++  K 
Sbjct: 1564 LGPGGALSLTQALDGSPHLEEISLAENNLAGGVLHFCKELPLLRQIDLVSCKIDNQTIKL 1623

Query: 519  LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            L  SF     AL  I L++N + D+ A  +AQ L   +   +  ++L  N +T FG
Sbjct: 1624 LTSSFTRC-PALEVILLSWNLLGDEAAAELAQVLP--QMGRLKRVDLEKNQITAFG 1676



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 5/218 (2%)

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + ++ +S +G  H+A  + +C  L  ++L  N   +EG + +  AL+    +  +DLG  
Sbjct: 1365 LTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLGHL 1424

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
             ++S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG 
Sbjct: 1425 LLNSSALTLLTHGLSHMTRLQSLRLKRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGD 1484

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            +G + +A +L     +  +DL  N +   G   LA+S  ++   L  + L  N + D  A
Sbjct: 1485 AGVQHLATILPGLPELRKIDLSVNSISPAGGMQLAESL-ILCRHLEELMLGCNALGDPTA 1543

Query: 546  FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
              +A+ L  +  V    L+L  + L   G  +LT A D
Sbjct: 1544 LGLARELPQHLRV----LHLPFSHLGPGGALSLTQALD 1577



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 20/278 (7%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           +HL+  + G        + L G   +  L       GD    AL   L +  G+L +L +
Sbjct: 665 IHLD--FDGCPLEPHCPEALVGCGQIENLSFKSRKCGDAFAEALSRSLPT-MGRLQMLGL 721

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
             + I+A+G  H+ + +  C  L  ++   N + D+    I + L     +  +DL GN+
Sbjct: 722 AGSKITARGISHLVKALPLCPQLEEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSGNS 781

Query: 427 IHSKGASAIARVLKDNSVITSL-----DLAY--NPIGADGA--KALSEVLKFHGNIN--- 474
           +       +ARV      I +L     DL +  +P     A  +   ++ +  G      
Sbjct: 782 VCVSTLLCLARVAVTCPTIRTLQARKADLIFLLSPPTETTAELQRAPDLQESDGQRKGAQ 841

Query: 475 ----TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEAL 530
               TL+L  CQ+    AE +  +L+    +  +DL  N L DEG + +A++   ++ A 
Sbjct: 842 SRSLTLRLQKCQLQVHDAETLIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIA- 900

Query: 531 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
             +DL+ N +   G   + +A+ A   +A   ++L + 
Sbjct: 901 RKLDLSDNGLSLAGVHCVLRAVSACWTLAELHISLRHK 938



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 19/231 (8%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++G      G+  L ++L      EEVSF  N ++   +     VL     L+ L+LSGN
Sbjct: 721 LAGSKITARGISHLVKALPLCPQLEEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSGN 780

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVD---LRDEGAKAIAELLKNNSILRVLELNNNM 285
            +    + CL  + V    +  LQ    D   L     +  AEL       R  +L  + 
Sbjct: 781 SVCVSTLLCLARVAVTCPTIRTLQARKADLIFLLSPPTETTAEL------QRAPDLQESD 834

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G  S +  L        +H          A  L   L+    L E+ L GN + DE
Sbjct: 835 GQRKGAQSRSLTLRLQKCQLQVH---------DAETLIALLQEGPHLEEVDLSGNQLEDE 885

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           G R LM+  +S+      LD+ +N +S  G   V   +  C +L  +++ +
Sbjct: 886 GCR-LMAEAASQLHIARKLDLSDNGLSLAGVHCVLRAVSACWTLAELHISL 935


>gi|348682848|gb|EGZ22664.1| hypothetical protein PHYSODRAFT_488550 [Phytophthora sojae]
          Length = 436

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 190/413 (46%), Gaps = 45/413 (10%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           MS R+  D     LA S+  N   EE+  + + + A G++AF   L  N  LK L+L   
Sbjct: 28  MSTRSISDADFGRLASSISGNSQLEELYLSGHKVGAQGLQAFADCLAVNSTLKHLSLGSE 87

Query: 229 PIGDEGVKCLCDILVDNA--GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            +GD+ VK L   L  NA   +E   L    L  +GA A+ ELLK N  L+ + L+ N I
Sbjct: 88  ALGDDAVKTLSAGLARNAQSALESWDLEFKSLGVDGAAAVGELLKTNKSLKTVTLSRNQI 147

Query: 287 DYSGFTSLAEALLENST--IRSLHLNGNYGGALGANALA-----------------KGLE 327
              G   LAE L EN+   ++ L +        G ++LA                  GLE
Sbjct: 148 GDEGVKKLAERLSENAEAGVKELSVTDVGISGAGLDSLAALVEKESCSLMTLQVSFNGLE 207

Query: 328 -----------GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                       NKSL +L +    + D+ + AL + L  +   L  +D+ +N ++    
Sbjct: 208 TASSKFFDAFKTNKSLTKLQMKECKLTDDHVAALAAAL-KQNSTLVEVDLSDNELTQASC 266

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAI 435
             +A+ +++ K+L  + L  N   DEGA ++AD L   N T+T +++G N + S G   +
Sbjct: 267 AALADGLRDNKTLKILRLENNKCQDEGAVQLADVLATSNTTLTYLEMGNNALTSVG---M 323

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
             +LK  S +  L L  N +G +G   L   L  +  I T  +G  ++  + +  + + L
Sbjct: 324 TPLLKAQS-LKELHLFNNKLG-EGLSELLPALLANSAIETFGIGANRLHEALSVTLFNAL 381

Query: 496 RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF--NEIRDDGAF 546
             + ++  L++  N L  EG   L +    + EA  S+D+A   N   +DG+F
Sbjct: 382 HSHPSLKTLEMGGNTLGQEGHNALDR----LKEANRSLDVAVDKNAANEDGSF 430



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 164/349 (46%), Gaps = 44/349 (12%)

Query: 152 QTLNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYN-QTAEE---VSFAANGITA 204
           Q L  FA  L   S++    +     GD+ +  L+  L  N Q+A E   + F + G+  
Sbjct: 64  QGLQAFADCLAVNSTLKHLSLGSEALGDDAVKTLSAGLARNAQSALESWDLEFKSLGVD- 122

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA--GVERLQLSSVDLRDEG 262
            G  A   +L++N +LKT+ LS N IGDEGVK L + L +NA  GV+ L ++ V +   G
Sbjct: 123 -GAAAVGELLKTNKSLKTVTLSRNQIGDEGVKKLAERLSENAEAGVKELSVTDVGISGAG 181

Query: 263 AKAIAELL----------------------------KNNSILRVLELNNNMIDYSGFTSL 294
             ++A L+                            K N  L  L++    +      +L
Sbjct: 182 LDSLAALVEKESCSLMTLQVSFNGLETASSKFFDAFKTNKSLTKLQMKECKLTDDHVAAL 241

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A AL +NST+  + L+ N        ALA GL  NK+L+ L L  N   DEG   L   L
Sbjct: 242 AAALKQNSTLVEVDLSDNELTQASCAALADGLRDNKTLKILRLENNKCQDEGAVQLADVL 301

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
           ++    L  L++GNN++++ G   +   +K  +SL  ++L+ N +G EG  ++  AL  N
Sbjct: 302 ATSNTTLTYLEMGNNALTSVG---MTPLLK-AQSLKELHLFNNKLG-EGLSELLPALLAN 356

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             I T  +G N +H   +  +   L  +  + +L++  N +G +G  AL
Sbjct: 357 SAIETFGIGANRLHEALSVTLFNALHSHPSLKTLEMGGNTLGQEGHNAL 405


>gi|332842671|ref|XP_001163223.2| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Pan troglodytes]
          Length = 488

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    N S+I SL L+GN      A  L + L  N  +++L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 223

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 224 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 282

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 283 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 456 GADGA 460
             DGA
Sbjct: 343 NMDGA 347



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 134/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 168

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  ++ A  +  AL  N  I  +DL  N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 228

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 229 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 288

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
             A  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 289 EVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLES-NESLRVLKLFLNPINMDGA 347

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  A+K N    +  L+++N  +++
Sbjct: 348 ILLILAIKRNPKSRMEELDISNVLVSE 374



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 30/264 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 121 GTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 180

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 181 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFS-------- 231

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 232 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 271

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 272 GNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNES 331

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           + +L L  N +  +GA  L  + K
Sbjct: 332 LRVLKLFLNPINMDGAILLILAIK 355



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 129/252 (51%), Gaps = 7/252 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +  +   + +E  +S   L+ HG  +G  G +A+   L S    +  L++ +N I  +
Sbjct: 94  GVVPVSYFIRNME--ESYVNLNHHG--LGPRGTKAIAIALVSNPA-VTKLELEDNCIMEE 148

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
           G   + E ++    L  +N+  N +G EGA  I+D  ++N + I +++L GN+     A+
Sbjct: 149 GVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAA 208

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            + + L  N  I  LDL++N     G + L ++L  +  + +L L W      GA  + +
Sbjct: 209 LLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCN 268

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            LR N T++ LDL  NG  +E A  L +  + +N  L  +D+  N+I ++GA  I++ L+
Sbjct: 269 GLRGNVTLTKLDLSMNGFGNEVALALGEVLR-LNSCLVYLDIGGNDIGNEGASKISKGLE 327

Query: 554 ANEDVAVTSLNL 565
           +NE + V  L L
Sbjct: 328 SNESLRVLKLFL 339



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 223

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 224 DLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 282

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N    + A  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 283 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 343 NMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 393



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 108 SYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 167

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 168 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 227

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 228 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 287

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 288 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 346

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 347 AILLILAIKRN 357



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375


>gi|405954368|gb|EKC21830.1| hypothetical protein CGI_10003222 [Crassostrea gigas]
          Length = 544

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 149/303 (49%), Gaps = 3/303 (0%)

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +G  ++A AL+ NST+ SL L+ N  G+ G   + + L+ NK++ +++L GN +G  G R
Sbjct: 125 NGAKAVAIALVNNSTVSSLDLSSNGLGSAGLFYVLEMLQSNKNISDINLAGNDLGSRGAR 184

Query: 349 ALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            +   L  RK + +  L+I  NS S + A H+A+ I   K+L  + L  N   ++G   +
Sbjct: 185 LISDSL--RKNRTITKLNISGNSFSERDATHMAKLISRNKALKELILSHNTFREQGGVIL 242

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
             AL+ N  + T+DL  N++   GA AI   + +N+ +TSLDL++N  G +G   + + L
Sbjct: 243 GKALESNSVLKTLDLSWNHLRLLGAVAICWSVAENTCLTSLDLSWNGFGMEGCHEMGKSL 302

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
             +  +  L L   ++       +   + +N  + +L +  N +  +GA  + QS  V +
Sbjct: 303 LRNRTLTHLDLSANRVSFDAFRQLLRGVVHNKVLKVLKVGVNPITTDGAFAILQSIAVSD 362

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYE 587
            +L  IDL    +  D    + Q  K    V V    L ++   K   + + D  D V  
Sbjct: 363 SSLEEIDLKDVSVDMDFVDLLEQIQKRRHLVCVYGNTLRHDETKKGNVARVLDTDDPVTV 422

Query: 588 MSE 590
           + E
Sbjct: 423 LFE 425



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 114/219 (52%), Gaps = 1/219 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           SS+D+S    G  GLF++ E L  N+   +++ A N + + G +     L+ N  +  LN
Sbjct: 141 SSLDLSSNGLGSAGLFYVLEMLQSNKNISDINLAGNDLGSRGARLISDSLRKNRTITKLN 200

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           +SGN   +     +  ++  N  ++ L LS    R++G   + + L++NS+L+ L+L+ N
Sbjct: 201 ISGNSFSERDATHMAKLISRNKALKELILSHNTFREQGGVILGKALESNSVLKTLDLSWN 260

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +   G  ++  ++ EN+ + SL L+ N  G  G + + K L  N++L  L L  N +  
Sbjct: 261 HLRLLGAVAICWSVAENTCLTSLDLSWNGFGMEGCHEMGKSLLRNRTLTHLDLSANRVSF 320

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           +  R L+ G+   K  L VL +G N I+  GAF + + I
Sbjct: 321 DAFRQLLRGVVHNK-VLKVLKVGVNPITTDGAFAILQSI 358



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 119/223 (53%), Gaps = 4/223 (1%)

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
           HG  IG  G +A+   L +    ++ LD+ +N + + G F+V E +++ K++  INL  N
Sbjct: 120 HG--IGPNGAKAVAIALVN-NSTVSSLDLSSNGLGSAGLFYVLEMLQSNKNISDINLAGN 176

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           D+G  GA  I+D+L++NRTIT +++ GN+   + A+ +A+++  N  +  L L++N    
Sbjct: 177 DLGSRGARLISDSLRKNRTITKLNISGNSFSERDATHMAKLISRNKALKELILSHNTFRE 236

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
            G   L + L+ +  + TL L W  +   GA  +   +  N  ++ LDL  NG   EG  
Sbjct: 237 QGGVILGKALESNSVLKTLDLSWNHLRLLGAVAICWSVAENTCLTSLDLSWNGFGMEGCH 296

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
            + +S  + N  LT +DL+ N +  D    + + +  N+ + V
Sbjct: 297 EMGKSL-LRNRTLTHLDLSANRVSFDAFRQLLRGVVHNKVLKV 338



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 1/234 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IG  G K +   LV+N+ V  L LSS  L   G   + E+L++N  +  + L  N +   
Sbjct: 122 IGPNGAKAVAIALVNNSTVSSLDLSSNGLGSAGLFYVLEMLQSNKNISDINLAGNDLGSR 181

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   ++++L +N TI  L+++GN      A  +AK +  NK+L+EL L  N+  ++G   
Sbjct: 182 GARLISDSLRKNRTITKLNISGNSFSERDATHMAKLISRNKALKELILSHNTFREQGGVI 241

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L   L S    L  LD+  N +   GA  +   +     L  ++L  N  G EG  ++  
Sbjct: 242 LGKALES-NSVLKTLDLSWNHLRLLGAVAICWSVAENTCLTSLDLSWNGFGMEGCHEMGK 300

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           +L +NRT+T +DL  N +       + R +  N V+  L +  NPI  DGA A+
Sbjct: 301 SLLRNRTLTHLDLSANRVSFDAFRQLLRGVVHNKVLKVLKVGVNPITTDGAFAI 354



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 3/205 (1%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L I ++ I   GA  VA  + N  ++  ++L  N +G  G   + + L+ N+ I+ I+L 
Sbjct: 115 LVIPHHGIGPNGAKAVAIALVNNSTVSSLDLSSNGLGSAGLFYVLEMLQSNKNISDINLA 174

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN++ S+GA  I+  L+ N  IT L+++ N      A  +++++  +  +  L L     
Sbjct: 175 GNDLGSRGARLISDSLRKNRTITKLNISGNSFSERDATHMAKLISRNKALKELILSHNTF 234

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
              G   +   L  N+ +  LDL  N LR  GA  +  S    N  LTS+DL++N    +
Sbjct: 235 REQGGVILGKALESNSVLKTLDLSWNHLRLLGAVAICWSV-AENTCLTSLDLSWNGFGME 293

Query: 544 GAFAIAQALKANEDVAVTSLNLANN 568
           G   + ++L  N    +T L+L+ N
Sbjct: 294 GCHEMGKSLLRNR--TLTHLDLSAN 316



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 2/203 (0%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  + +++SG +F +     +A+ +  N+  +E+  + N     G       L+SN  LK
Sbjct: 194 RTITKLNISGNSFSERDATHMAKLISRNKALKELILSHNTFREQGGVILGKALESNSVLK 253

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL+LS N +   G   +C  + +N  +  L LS      EG   + + L  N  L  L+L
Sbjct: 254 TLDLSWNHLRLLGAVAICWSVAENTCLTSLDLSWNGFGMEGCHEMGKSLLRNRTLTHLDL 313

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLRELHLHGN 340
           + N + +  F  L   ++ N  ++ L +  N     GA A+ + +   + SL E+ L   
Sbjct: 314 SANRVSFDAFRQLLRGVVHNKVLKVLKVGVNPITTDGAFAILQSIAVSDSSLEEIDLKDV 373

Query: 341 SIGDEGIRALMSGLSSRKGKLAV 363
           S+ D     L+  +  R+  + V
Sbjct: 374 SV-DMDFVDLLEQIQKRRHLVCV 395



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 31/160 (19%)

Query: 447 SLDLAYNPIGADGAKALS----------------------------EVLKFHGNINTLKL 478
           SL + ++ IG +GAKA++                            E+L+ + NI+ + L
Sbjct: 114 SLVIPHHGIGPNGAKAVAIALVNNSTVSSLDLSSNGLGSAGLFYVLEMLQSNKNISDINL 173

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
               +G+ GA  ++D LR N TI+ L++  N   +  A  +A+     N+AL  + L+ N
Sbjct: 174 AGNDLGSRGARLISDSLRKNRTITKLNISGNSFSERDATHMAKLIS-RNKALKELILSHN 232

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
             R+ G   + +AL++N    + +L+L+ N L   G  A+
Sbjct: 233 TFREQGGVILGKALESNS--VLKTLDLSWNHLRLLGAVAI 270


>gi|320165120|gb|EFW42019.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 685

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L   +I ++  + IA+ALK N ++  +DL  N I   GA AIA  LK N+ +T L L 
Sbjct: 19  LELIQQNIREDDVQAIAEALKVNTSLKALDLRVNQIGDAGAQAIAEALKVNTTLTHLYLD 78

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
              IG  GA+A++E LK +  +  + L   QIG +GA+ +A+ L+ N  ++ L L  N +
Sbjct: 79  ECHIGVVGAQAIAEALKVNTVLTEIYLRDNQIGDAGAQAIAETLKVNTILTALALGKNHI 138

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
              GA+ +A++ K VN  +  + L  N+I D GA AIA+ LK N+ +    L+L+NNF+T
Sbjct: 139 SVAGAQAIAEALK-VNRLVNHVRLNDNQIGDAGALAIAEVLKVNKKLRY--LSLSNNFIT 195

Query: 572 KFGQSAL 578
             G +AL
Sbjct: 196 IVGINAL 202



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 1/185 (0%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L+L   ++R++  +AIAE LK N+ L+ L+L  N I  +G  ++AEAL  N+T+  L+L+
Sbjct: 19  LELIQQNIREDDVQAIAEALKVNTSLKALDLRVNQIGDAGAQAIAEALKVNTTLTHLYLD 78

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
             + G +GA A+A+ L+ N  L E++L  N IGD G +A+   L      L  L +G N 
Sbjct: 79  ECHIGVVGAQAIAEALKVNTVLTEIYLRDNQIGDAGAQAIAETLKV-NTILTALALGKNH 137

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS  GA  +AE +K  + +  + L  N IGD GA  IA+ LK N+ +  + L  N I   
Sbjct: 138 ISVAGAQAIAEALKVNRLVNHVRLNDNQIGDAGALAIAEVLKVNKKLRYLSLSNNFITIV 197

Query: 431 GASAI 435
           G +A+
Sbjct: 198 GINAL 202



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           R L L   +I ++ ++A+   L      L  LD+  N I   GA  +AE +K   +L  +
Sbjct: 17  RTLELIQQNIREDDVQAIAEALKVNTS-LKALDLRVNQIGDAGAQAIAEALKVNTTLTHL 75

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L    IG  GA+ IA+ALK N  +T I L  N I   GA AIA  LK N+++T+L L  
Sbjct: 76  YLDECHIGVVGAQAIAEALKVNTVLTEIYLRDNQIGDAGAQAIAETLKVNTILTALALGK 135

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           N I   GA+A++E LK +  +N ++L   QIG +GA  +A++L+ N  +  L L  N + 
Sbjct: 136 NHISVAGAQAIAEALKVNRLVNHVRLNDNQIGDAGALAIAEVLKVNKKLRYLSLSNNFIT 195

Query: 513 DEGAKCLAQS 522
             G   L Q+
Sbjct: 196 IVGINALWQT 205



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 98/194 (50%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           + K   A  ++++  +N  ++ +  +AE+L  N + + +    N I  AG +A    L+ 
Sbjct: 9   YDKVKHASRTLELIQQNIREDDVQAIAEALKVNTSLKALDLRVNQIGDAGAQAIAEALKV 68

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L  L L    IG  G + + + L  N  +  + L    + D GA+AIAE LK N+IL
Sbjct: 69  NTTLTHLYLDECHIGVVGAQAIAEALKVNTVLTEIYLRDNQIGDAGAQAIAETLKVNTIL 128

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L  N I  +G  ++AEAL  N  +  + LN N  G  GA A+A+ L+ NK LR L 
Sbjct: 129 TALALGKNHISVAGAQAIAEALKVNRLVNHVRLNDNQIGDAGALAIAEVLKVNKKLRYLS 188

Query: 337 LHGNSIGDEGIRAL 350
           L  N I   GI AL
Sbjct: 189 LSNNFITIVGINAL 202



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 1/169 (0%)

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
           ++A    L+ N +LK L+L  N IGD G + + + L  N  +  L L    +   GA+AI
Sbjct: 31  VQAIAEALKVNTSLKALDLRVNQIGDAGAQAIAEALKVNTTLTHLYLDECHIGVVGAQAI 90

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE LK N++L  + L +N I  +G  ++AE L  N+ + +L L  N+    GA A+A+ L
Sbjct: 91  AEALKVNTVLTEIYLRDNQIGDAGAQAIAETLKVNTILTALALGKNHISVAGAQAIAEAL 150

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           + N+ +  + L+ N IGD G  A+   L   K KL  L + NN I+  G
Sbjct: 151 KVNRLVNHVRLNDNQIGDAGALAIAEVLKVNK-KLRYLSLSNNFITIVG 198



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 82/171 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K   +  ++D+     GD G   +AE+L  N T   +      I   G +A  
Sbjct: 32  QAIAEALKVNTSLKALDLRVNQIGDAGAQAIAEALKVNTTLTHLYLDECHIGVVGAQAIA 91

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L  + L  N IGD G + + + L  N  +  L L    +   GA+AIAE LK
Sbjct: 92  EALKVNTVLTEIYLRDNQIGDAGAQAIAETLKVNTILTALALGKNHISVAGAQAIAEALK 151

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            N ++  + LN+N I  +G  ++AE L  N  +R L L+ N+   +G NAL
Sbjct: 152 VNRLVNHVRLNDNQIGDAGALAIAEVLKVNKKLRYLSLSNNFITIVGINAL 202


>gi|146089485|ref|XP_001470396.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|398016901|ref|XP_003861638.1| hypothetical protein, conserved [Leishmania donovani]
 gi|134070429|emb|CAM68769.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|322499865|emb|CBZ34938.1| hypothetical protein, conserved [Leishmania donovani]
          Length = 429

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 159/320 (49%), Gaps = 13/320 (4%)

Query: 280 ELNNNMIDYSGFTSLAEALLE---NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           +++N  +D     S+  ALL+   ++ I ++ L  N  G  GA  +A  LE +  + E+ 
Sbjct: 7   QISNQQLD-----SICRALLDREFDTPIHTIDLMDNQLGPTGAVKIASCLESSP-VTEVF 60

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           +  N IG EG   L +G+ +    L VLDI  N +SA     +   +    +L  + L  
Sbjct: 61  ICYNDIGKEGCDGL-AGVVNLSHSLQVLDIRGNHLSASDVHRLLRSVSMSTALSRLGLAS 119

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYNPI 455
           N +G EGA   A AL++N  ++++DL  N +   GA  +A +L+++ S +  L L  N +
Sbjct: 120 NRLGPEGAALAAKALERNTYLSSLDLSVNELGPSGAECLAGILRNSVSALRVLQLHGNYL 179

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G  G  A+ + ++ +  +  L LG        A  VA ML  N+T+  LD+R N L   G
Sbjct: 180 GPTGVIAICDAVRTNKELRRLTLGNNHATDEAAGAVAAMLEANDTLEELDIRLNTLTANG 239

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
            + + Q     N +L  + L+ NE+   GA  + Q L +++   +  L+L++  LT  G 
Sbjct: 240 VRTIVQQGLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLEQLDLSSCGLTASGG 299

Query: 576 SALTDAKDLVYEMSEKEVNI 595
           + +  A  L   MS KE+N+
Sbjct: 300 ARV--ASLLSTSMSLKEINL 317



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 140/269 (52%), Gaps = 5/269 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI-ALK 221
           A S + ++    G EG    A++L  N     +  + N +  +G +   G+L++++ AL+
Sbjct: 111 ALSRLGLASNRLGPEGAALAAKALERNTYLSSLDLSVNELGPSGAECLAGILRNSVSALR 170

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L GN +G  GV  +CD +  N  + RL L +    DE A A+A +L+ N  L  L++
Sbjct: 171 VLQLHGNYLGPTGVIAICDAVRTNKELRRLTLGNNHATDEAAGAVAAMLEANDTLEELDI 230

Query: 282 NNNMIDYSGF-TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS--LRELHLH 338
             N +  +G  T + + L +N+++  L L+GN  G +GAN L + L  ++   L +L L 
Sbjct: 231 RLNTLTANGVRTIVQQGLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLEQLDLS 290

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
              +   G  A ++ L S    L  +++ +N++  + A  +A+ I +  ++  +++  N 
Sbjct: 291 SCGLTASG-GARVASLLSTSMSLKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNK 349

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNI 427
           IG+EGA ++ DA  +N  +  +   GNNI
Sbjct: 350 IGEEGASQLIDAALRNAQLVALVTNGNNI 378



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 145/294 (49%), Gaps = 3/294 (1%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G EG   LA  +  + + + +    N ++A+ +      +  + AL  L L+ N +G 
Sbjct: 65  DIGKEGCDGLAGVVNLSHSLQVLDIRGNHLSASDVHRLLRSVSMSTALSRLGLASNRLGP 124

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN-SILRVLELNNNMIDYSGF 291
           EG       L  N  +  L LS  +L   GA+ +A +L+N+ S LRVL+L+ N +  +G 
Sbjct: 125 EGAALAAKALERNTYLSSLDLSVNELGPSGAECLAGILRNSVSALRVLQLHGNYLGPTGV 184

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            ++ +A+  N  +R L L  N+     A A+A  LE N +L EL +  N++   G+R ++
Sbjct: 185 IAICDAVRTNKELRRLTLGNNHATDEAAGAVAAMLEANDTLEELDIRLNTLTANGVRTIV 244

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG--DEGAEKIAD 409
               ++   LAVL +  N +   GA  + + + + +  +   L ++  G    G  ++A 
Sbjct: 245 QQGLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLEQLDLSSCGLTASGGARVAS 304

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            L  + ++  I+L  N +  + A  +A+ + D   I+ +D++ N IG +GA  L
Sbjct: 305 LLSTSMSLKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNKIGEEGASQL 358



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 157/335 (46%), Gaps = 5/335 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + T++L  N +G  G   +   L +++ V  + +   D+  EG   +A ++  +  L+VL
Sbjct: 29  IHTIDLMDNQLGPTGAVKIASCL-ESSPVTEVFICYNDIGKEGCDGLAGVVNLSHSLQVL 87

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++  N +  S    L  ++  ++ +  L L  N  G  GA   AK LE N  L  L L  
Sbjct: 88  DIRGNHLSASDVHRLLRSVSMSTALSRLGLASNRLGPEGAALAAKALERNTYLSSLDLSV 147

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +G  G   L   L +    L VL +  N +   G   + + ++  K L  + L  N  
Sbjct: 148 NELGPSGAECLAGILRNSVSALRVLQLHGNYLGPTGVIAICDAVRTNKELRRLTLGNNHA 207

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNPIGAD 458
            DE A  +A  L+ N T+  +D+  N + + G   I +  L  N+ +  L L+ N +G  
Sbjct: 208 TDEAAGAVAAMLEANDTLEELDIRLNTLTANGVRTIVQQGLAKNTSLAVLSLSGNEVGPV 267

Query: 459 GAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
           GA  L++VL  H    +  L L  C + ASG   VA +L  + ++  ++L  N L DE A
Sbjct: 268 GANELTQVLTSHQRSVLEQLDLSSCGLTASGGARVASLLSTSMSLKEINLSDNALDDEAA 327

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
             LAQ+       ++ +D++ N+I ++GA  +  A
Sbjct: 328 VRLAQNI-TDGITISVVDVSCNKIGEEGASQLIDA 361



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 6/205 (2%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSN 217
           KELR  +   +   +  DE    +A  L  N T EE+    N +TA G++      L  N
Sbjct: 195 KELRRLT---LGNNHATDEAAGAVAAMLEANDTLEELDIRLNTLTANGVRTIVQQGLAKN 251

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            +L  L+LSGN +G  G   L  +L  +  + +E+L LSS  L   G   +A LL  +  
Sbjct: 252 TSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLEQLDLSSCGLTASGGARVASLLSTSMS 311

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+ + L++N +D      LA+ + +  TI  + ++ N  G  GA+ L      N  L  L
Sbjct: 312 LKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNKIGEEGASQLIDAALRNAQLVAL 371

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGK 360
             +GN+I     + L + L  R  K
Sbjct: 372 VTNGNNISRAAQKRLDNLLEERLAK 396


>gi|123413398|ref|XP_001304269.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121885709|gb|EAX91339.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 732

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 173/356 (48%), Gaps = 11/356 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG-IKAFDGVLQSNIAL 220
           R F  +D+S     D+G  +LAE L Y+    ++   +N I   G ++ F+G++  N  L
Sbjct: 118 RPFYFMDLSLNRLSDQGASYLAEYLSYDPLLIQLDLKSNNIGIDGCVQIFEGLMH-NQHL 176

Query: 221 KTLNLSG------NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
            TL+LS       N IG  G + L ++L+ N  +  L ++   +  EG   I + L NN+
Sbjct: 177 TTLDLSAIDGIDRNRIGTPGCEALANLLLSNGVLCNLNIAMCGVTAEGCHHIGQALPNNT 236

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L+L++N    +G  S+         + SL L+ N  G     AL   L   KSLR 
Sbjct: 237 SLTHLDLSSNRFGSAGANSMFSQPGALGALESLVLSRNLIGDDAGPALVTQLSRAKSLRY 296

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N+     ++ ++    +   +++ L + +N ++ +   ++   +K    +  +NL
Sbjct: 297 LDLSRNNFTKGFLKYILQAYDN-GCRVSNLSLAHNKLN-ESLEYLCHVLKTYSKIRILNL 354

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN-SVITSLDLAYN 453
             N IGD G  K+ ++L+QN +++ +DL      SKGA+AI+ VL +  + I  L L  N
Sbjct: 355 SGNKIGDNGIIKLMESLEQNTSLSILDLSQTECTSKGAAAISVVLANGVTPIQKLYLNNN 414

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            I  DG   L E ++ +  + ++ L   ++    A  +  +L+ N TI  +D+  N
Sbjct: 415 KISDDGGVRLFEAIENNTTLVSISLKNNEMKDKTAATLIKILKTNTTIGDIDVTMN 470



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 161/360 (44%), Gaps = 16/360 (4%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           I  KTLN +G  +G    + L  +L        + LS   L D+GA  +AE L  + +L 
Sbjct: 90  IRKKTLNFTGLGLGPLSSQYLMALLPFKRPFYFMDLSLNRLSDQGASYLAEYLSYDPLLI 149

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG------NYGGALGANALAKGLEGNKS 331
            L+L +N I   G   + E L+ N  + +L L+       N  G  G  ALA  L  N  
Sbjct: 150 QLDLKSNNIGIDGCVQIFEGLMHNQHLTTLDLSAIDGIDRNRIGTPGCEALANLLLSNGV 209

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L++    +  EG   +   L +    L  LD+ +N   + GA  +        +L  
Sbjct: 210 LCNLNIAMCGVTAEGCHHIGQALPNNTS-LTHLDLSSNRFGSAGANSMFSQPGALGALES 268

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + L  N IGD+    +   L + +++  +DL  NN        I +   +   +++L LA
Sbjct: 269 LVLSRNLIGDDAGPALVTQLSRAKSLRYLDLSRNNFTKGFLKYILQAYDNGCRVSNLSLA 328

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           +N +  +  + L  VLK +  I  L L   +IG +G   + + L  N ++SILDL     
Sbjct: 329 HNKLN-ESLEYLCHVLKTYSKIRILNLSGNKIGDNGIIKLMESLEQNTSLSILDLSQTEC 387

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAF---NEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
             +GA  ++    V+   +T I   +   N+I DDG   + +A++ N    + S++L NN
Sbjct: 388 TSKGAAAISV---VLANGVTPIQKLYLNNNKISDDGGVRLFEAIENN--TTLVSISLKNN 442



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 1/266 (0%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
           EG   + ++L  N +   +  ++N   +AG  +      +  AL++L LS N IGD+   
Sbjct: 223 EGCHHIGQALPNNTSLTHLDLSSNRFGSAGANSMFSQPGALGALESLVLSRNLIGDDAGP 282

Query: 237 CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
            L   L     +  L LS  +      K I +   N   +  L L +N ++ S    L  
Sbjct: 283 ALVTQLSRAKSLRYLDLSRNNFTKGFLKYILQAYDNGCRVSNLSLAHNKLNES-LEYLCH 341

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
            L   S IR L+L+GN  G  G   L + LE N SL  L L       +G  A+   L++
Sbjct: 342 VLKTYSKIRILNLSGNKIGDNGIIKLMESLEQNTSLSILDLSQTECTSKGAAAISVVLAN 401

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
               +  L + NN IS  G   + E I+N  +L+ I+L  N++ D+ A  +   LK N T
Sbjct: 402 GVTPIQKLYLNNNKISDDGGVRLFEAIENNTTLVSISLKNNEMKDKTAATLIKILKTNTT 461

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDN 442
           I  ID+  N+   +    +A +++++
Sbjct: 462 IGDIDVTMNDFSYRSYVKVASLIEEH 487



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 3/263 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + +D+S   FG  G   +    G     E +  + N I      A    L    +L+ 
Sbjct: 237 SLTHLDLSSNRFGSAGANSMFSQPGALGALESLVLSRNLIGDDAGPALVTQLSRAKSLRY 296

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N      +K +     +   V  L L+   L +E  + +  +LK  S +R+L L+
Sbjct: 297 LDLSRNNFTKGFLKYILQAYDNGCRVSNLSLAHNKL-NESLEYLCHVLKTYSKIRILNLS 355

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHLHGNS 341
            N I  +G   L E+L +N+++  L L+     + GA A++  L  G   +++L+L+ N 
Sbjct: 356 GNKIGDNGIIKLMESLEQNTSLSILDLSQTECTSKGAAAISVVLANGVTPIQKLYLNNNK 415

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I D+G   L   + +    L  + + NN +  K A  + + +K   ++  I++ MND   
Sbjct: 416 ISDDGGVRLFEAIEN-NTTLVSISLKNNEMKDKTAATLIKILKTNTTIGDIDVTMNDFSY 474

Query: 402 EGAEKIADALKQNRTITTIDLGG 424
               K+A  +++++     ++ G
Sbjct: 475 RSYVKVASLIEEHKKTLNSNIAG 497



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 8/168 (4%)

Query: 152 QTLNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           ++L      L+ +S +   ++SG   GD G+  L ESL  N +   +  +    T+ G  
Sbjct: 334 ESLEYLCHVLKTYSKIRILNLSGNKIGDNGIIKLMESLEQNTSLSILDLSQTECTSKGAA 393

Query: 209 AFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           A   VL + +  ++ L L+ N I D+G   L + + +N  +  + L + +++D+ A  + 
Sbjct: 394 AISVVLANGVTPIQKLYLNNNKISDDGGVRLFEAIENNTTLVSISLKNNEMKDKTAATLI 453

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
           ++LK N+ +  +++  N   Y  +  +A  + E+       LN N  G
Sbjct: 454 KILKTNTTIGDIDVTMNDFSYRSYVKVASLIEEHKKT----LNSNIAG 497


>gi|355747741|gb|EHH52238.1| Caspase recruitment domain-containing protein 4 [Macaca
           fascicularis]
          Length = 953

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N + ++G  ++AR
Sbjct: 803 CLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I+ + L  N ++ E AK      +++
Sbjct: 923 NTGITEICLNGNLIKPEEAKVYEDEKRII 951



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL+ N  +    LN
Sbjct: 895 -NQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLN 932



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 104/213 (48%), Gaps = 1/213 (0%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK L + L     V  L L +  + D GA+ + ++L     L  L
Sbjct: 730 LTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G   LA A+  + +I  + + GN  G  GA A A+ L  + SL  L L  
Sbjct: 790 KLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLAS 849

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +  EG ++L   L  +   L +L +  N +  + A  +AE +K  ++L  + L  N I
Sbjct: 850 NGVSTEGGKSLARAL-QQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQI 908

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             +G  ++ADAL+ N  IT I L GN I  + A
Sbjct: 909 TAKGTAQLADALQNNTGITEICLNGNLIKPEEA 941



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N +D     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 94/205 (45%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + +S     D G+  L+E L   +    +    N IT  G +    +L     L  L
Sbjct: 730 LTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHL 789

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L +
Sbjct: 790 KLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLAS 849

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+ L L  N I 
Sbjct: 850 NGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQIT 909

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGN 368
            +G   L   L +  G   +   GN
Sbjct: 910 AKGTAQLADALQNNTGITEICLNGN 934



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELDDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L     ++
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLT 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG KCLA + K  +++++ + +  N++ D+GA A A+AL+ +   ++T+
Sbjct: 788 HLKLGKNKITSEGGKCLALAVKN-SKSISDVGMWGNQVGDEGAKAFAEALRNHP--SLTT 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA+N ++  G  +L  A
Sbjct: 845 LSLASNGVSTEGGKSLARA 863


>gi|410952572|ref|XP_003982953.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Felis catus]
          Length = 953

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   + E +   K L ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVIRLSVNQITDSGVKVLCEELTKYKILTFLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA  L + + +T + LG N I S+G   +A  +K +  I  + +  N IG +GAKA +E
Sbjct: 775 YIARILDECKGLTHLKLGENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I   G + +A  L++N ++ I  L  N L DE A+ LA+  K 
Sbjct: 835 ALRNHPSLTNLSLAFNGISTEGGKSLAQALQWNTSLRIFWLTKNELDDEVAESLAEMLK- 893

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           VN+ L  + L  N+I   G   +A AL+ N  +    LN
Sbjct: 894 VNQTLKHLWLIQNQITAKGIAQLADALQRNTGIMEICLN 932



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K L  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLCEELTKYKILTFLGLYNNQITDVGARYIARILDECKG-LTHLKLGENKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +K  KS+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++A+
Sbjct: 803 CLALAVKKSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQ 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQWNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQR 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I  + L  N ++ E AK      ++V
Sbjct: 923 NTGIMEICLNGNLIKPEEAKVFQDEKRIV 951



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 109/229 (47%), Gaps = 5/229 (2%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK LC+ L     +  L L +  + D GA+ IA +L     L  L
Sbjct: 730 LTVIRLSVNQITDSGVKVLCEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G   LA A+ ++ +I  + + GN  G  GA A A+ L  + SL  L L  
Sbjct: 790 KLGENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAF 849

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  EG ++L   L      L +  +  N +  + A  +AE +K  ++L  + L  N I
Sbjct: 850 NGISTEGGKSLAQALQWNTS-LRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQI 908

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             +G  ++ADAL++N  I  I L GN I  +     A+V +D   I   
Sbjct: 909 TAKGIAQLADALQRNTGIMEICLNGNLIKPEE----AKVFQDEKRIVCF 953



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 92/205 (44%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + +S     D G+  L E L   +    +    N IT  G +    +L     L  L
Sbjct: 730 LTVIRLSVNQITDSGVKVLCEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHL 789

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N I  EG KCL   +  +  +  + +    + DEGAKA AE L+N+  L  L L  
Sbjct: 790 KLGENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAF 849

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  SLA+AL  N+++R   L  N      A +LA+ L+ N++L+ L L  N I 
Sbjct: 850 NGISTEGGKSLAQALQWNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQIT 909

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGN 368
            +GI  L   L    G + +   GN
Sbjct: 910 AKGIAQLADALQRNTGIMEICLNGN 934



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A  L   +    +    N IT+ G K     ++ + ++  + + GN IGDEG 
Sbjct: 770 DVGARYIARILDECKGLTHLKLGENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGA 829

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L ++  +  L L+   +  EG K++A+ L+ N+ LR+  L  N +D     SLA
Sbjct: 830 KAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQWNTSLRIFWLTKNELDDEVAESLA 889

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T++ L L  N   A G   LA  L+ N  + E+ L+GN I  E
Sbjct: 890 EMLKVNQTLKHLWLIQNQITAKGIAQLADALQRNTGIMEICLNGNLIKPE 939



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 77/153 (50%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +  + + +       EG   LA ++  +++  EV    N I   G KAF   L+++ +
Sbjct: 782 ECKGLTHLKLGENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L+L+ N I  EG K L   L  N  +    L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTNLSLAFNGISTEGGKSLAQALQWNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 902 WLIQNQITAKGIAQLADALQRNTGIMEICLNGN 934


>gi|345783337|ref|XP_540521.3| PREDICTED: ribonuclease inhibitor [Canis lupus familiaris]
          Length = 416

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 152/330 (46%), Gaps = 21/330 (6%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           + + + +     GD G+  + + L       +++S     +T  G      VL+S   L+
Sbjct: 52  SLTELSLCTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCCLTKTGCGVLPAVLRSMPTLR 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS NP+ D G++ LC+ L+D    +E+LQL   +L     +++A  L+N    + L 
Sbjct: 112 ELHLSDNPLEDAGLQLLCEGLLDPQCHLEKLQLEYCNLTAASCESLASALRNKQHFKELA 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I  +G   L + L+E++  + +L L            L   +    SLREL L  
Sbjct: 172 VSNNEIGEAGVRVLCQGLVESACQLETLKLENCGLTPASCEDLRAVVASKTSLRELDLGD 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD+GI  L   L     ++ VL +    ++A G   +   +   +SL  ++L  N +
Sbjct: 232 NKLGDQGIAVLCPSLLHPSCQIRVLWLWECDVTATGCRDLCHVVSTKESLEELSLACNAL 291

Query: 400 GDEGAEKIADALKQ-------------NRTITTID-----LGGNNIHSKGASAIARVLKD 441
           GDEGA+ + ++L +             N T          LG  ++ + G +++A +L  
Sbjct: 292 GDEGAQLLCESLLEPGSRLQSLWVKSCNFTAACCHHFGTILGDCDVANDGCASLASLLLA 351

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           N  +  LDL+ N +   G + L E ++  G
Sbjct: 352 NRSLRELDLSNNRMNDQGIRRLMESVEQPG 381



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 169/391 (43%), Gaps = 24/391 (6%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           E L   Q  E V     G+T    K     LQ+N +L  L+L  N +GD GV  +   L 
Sbjct: 17  ELLPLIQQYEVVRLDDCGLTEVRCKDISSALQANPSLTELSLCTNELGDAGVHLVLQGLQ 76

Query: 244 D-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-N 301
                +++L L +  L   G   +  +L++   LR L L++N ++ +G   L E LL+  
Sbjct: 77  SPTCKIQKLSLQNCCLTKTGCGVLPAVLRSMPTLRELHLSDNPLEDAGLQLLCEGLLDPQ 136

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +  L L      A    +LA  L   +  +EL +  N IG+ G+R L  GL     +L
Sbjct: 137 CHLEKLQLEYCNLTAASCESLASALRNKQHFKELAVSNNEIGEAGVRVLCQGLVESACQL 196

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTI 420
             L + N  ++      +   + +  SL  ++L  N +GD+G   +  +L   +  I  +
Sbjct: 197 ETLKLENCGLTPASCEDLRAVVASKTSLRELDLGDNKLGDQGIAVLCPSLLHPSCQIRVL 256

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INTLK-- 477
            L   ++ + G   +  V+     +  L LA N +G +GA+ L E L   G+ + +L   
Sbjct: 257 WLWECDVTATGCRDLCHVVSTKESLEELSLACNALGDEGAQLLCESLLEPGSRLQSLWVK 316

Query: 478 ---------------LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
                          LG C +   G   +A +L  N ++  LDL  N + D+G + L +S
Sbjct: 317 SCNFTAACCHHFGTILGDCDVANDGCASLASLLLANRSLRELDLSNNRMNDQGIRRLMES 376

Query: 523 FK---VVNEALTSIDLAFNEIRDDGAFAIAQ 550
            +      E L   D+ +++  +D   A+ +
Sbjct: 377 VEQPGCALEQLVLYDIYWSQDIEDSLRALEE 407


>gi|320165466|gb|EFW42365.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 545

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 107/181 (59%), Gaps = 6/181 (3%)

Query: 364 LDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           LD+  N I+  GA  +AE ++ NC +L  ++L  N IGD GA  IA+ LK N+T+  +DL
Sbjct: 53  LDLSGNLIADVGARAIAEAVRANC-ALTVVDLTENRIGDAGARAIAETLKVNKTLIDLDL 111

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I + GA AIA  LK N  +  L LA NPIG DGA+A+++ LK +  +  L L   Q
Sbjct: 112 NDNQIGAAGAQAIADGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLWQNQ 171

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           I  +GA+ +A+ L+ N T++ LDL  N + D GA+ +A++ K     L + D    ++R 
Sbjct: 172 ITCTGAQALAEALKANTTVTELDLGKNQIGDAGARAIAEALK----ELAAKDQGLQQLRS 227

Query: 543 D 543
           D
Sbjct: 228 D 228



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 114/223 (51%), Gaps = 29/223 (13%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           A + L+L    IG+   K + + +  N  +  L LS   + D GA+AIAE ++ N  L V
Sbjct: 21  ASQLLDLCKQQIGNAEAKAIAEAIKVNTTMTELDLSGNLIADVGARAIAEAVRANCALTV 80

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           ++L  N I  +G  ++AE L  N T+  L LN N  GA GA A+A GL+ NK+L EL L 
Sbjct: 81  VDLTENRIGDAGARAIAETLKVNKTLIDLDLNDNQIGAAGAQAIADGLKVNKTLIELSLA 140

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD+G +A                             +A+ +K   +L  + L+ N 
Sbjct: 141 KNPIGDDGAQA-----------------------------IADALKVNTTLTELYLWQNQ 171

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           I   GA+ +A+ALK N T+T +DLG N I   GA AIA  LK+
Sbjct: 172 ITCTGAQALAEALKANTTVTELDLGKNQIGDAGARAIAEALKE 214



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 98/166 (59%), Gaps = 1/166 (0%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           ++  ++L  N I D GA  IA+A++ N  +T +DL  N I   GA AIA  LK N  +  
Sbjct: 49  TMTELDLSGNLIADVGARAIAEAVRANCALTVVDLTENRIGDAGARAIAETLKVNKTLID 108

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           LDL  N IGA GA+A+++ LK +  +  L L    IG  GA+ +AD L+ N T++ L L 
Sbjct: 109 LDLNDNQIGAAGAQAIADGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLW 168

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            N +   GA+ LA++ K  N  +T +DL  N+I D GA AIA+ALK
Sbjct: 169 QNQITCTGAQALAEALK-ANTTVTELDLGKNQIGDAGARAIAEALK 213



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 100/194 (51%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+  +  G+     +AE++  N T  E+  + N I   G +A    +++N AL  ++L+
Sbjct: 25  LDLCKQQIGNAEAKAIAEAIKVNTTMTELDLSGNLIADVGARAIAEAVRANCALTVVDLT 84

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD G + + + L  N  +  L L+   +   GA+AIA+ LK N  L  L L  N I
Sbjct: 85  ENRIGDAGARAIAETLKVNKTLIDLDLNDNQIGAAGAQAIADGLKVNKTLIELSLAKNPI 144

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  ++A+AL  N+T+  L+L  N     GA ALA+ L+ N ++ EL L  N IGD G
Sbjct: 145 GDDGAQAIADALKVNTTLTELYLWQNQITCTGAQALAEALKANTTVTELDLGKNQIGDAG 204

Query: 347 IRALMSGLSSRKGK 360
            RA+   L     K
Sbjct: 205 ARAIAEALKELAAK 218



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 102/198 (51%), Gaps = 11/198 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+SG    D G   +AE++  N     V    N I  AG +A    L+ N  L  L
Sbjct: 50  MTELDLSGNLIADVGARAIAEAVRANCALTVVDLTENRIGDAGARAIAETLKVNKTLIDL 109

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+ N IG  G + + D L  N  +  L L+   + D+GA+AIA+ LK N+ L  L L  
Sbjct: 110 DLNDNQIGAAGAQAIADGLKVNKTLIELSLAKNPIGDDGAQAIADALKVNTTLTELYLWQ 169

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  +G  +LAEAL  N+T+  L L  N  G  GA A+A      ++L+EL     +  
Sbjct: 170 NQITCTGAQALAEALKANTTVTELDLGKNQIGDAGARAIA------EALKEL-----AAK 218

Query: 344 DEGIRALMSGLSSRKGKL 361
           D+G++ L S L+++  +L
Sbjct: 219 DQGLQQLRSDLAAKDLEL 236


>gi|290987620|ref|XP_002676520.1| predicted protein [Naegleria gruberi]
 gi|284090123|gb|EFC43776.1| predicted protein [Naegleria gruberi]
          Length = 270

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 131/280 (46%), Gaps = 58/280 (20%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+   I+      L++ L  N+T  +LHL  N     G  AL + L+ N+ L+ L+L+
Sbjct: 20  LDLDEKEINNKELAQLSDLLRNNNTCYALHLKANNFDEKGLEALGEALQTNRFLKRLYLN 79

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G +                             H+A+ IK   +L  I++ M+ 
Sbjct: 80  NNRIGDVGCK-----------------------------HLADAIKRVTALGMIDMSMSG 110

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IG +GA+ +  +L  N +I TI L  N I ++G  A+A  LKDN  +  LD++ N IG D
Sbjct: 111 IGTQGAKFLGVSLVLNNSIHTIYLTDNTIGAEGTKALAEGLKDNKKLKVLDISRNDIGND 170

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA AL+E+LK +  +  L +    IG +G+  +A+ L                       
Sbjct: 171 GAVALAEMLKVNSVLEQLYIVKNNIGTTGSIALAEAL----------------------- 207

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
                 VVN+ + S+++ FN I DDGA    + L+ N+ +
Sbjct: 208 ------VVNKGMRSLNMDFNPIGDDGATPFMKVLRENDKI 241



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 1/207 (0%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++ +   NF ++GL  L E+L  N+  + +    N I   G K     ++   AL  +++
Sbjct: 47  ALHLKANNFDEKGLEALGEALQTNRFLKRLYLNNNRIGDVGCKHLADAIKRVTALGMIDM 106

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S + IG +G K L   LV N  +  + L+   +  EG KA+AE LK+N  L+VL+++ N 
Sbjct: 107 SMSGIGTQGAKFLGVSLVLNNSIHTIYLTDNTIGAEGTKALAEGLKDNKKLKVLDISRND 166

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I   G  +LAE L  NS +  L++  N  G  G+ ALA+ L  NK +R L++  N IGD+
Sbjct: 167 IGNDGAVALAEMLKVNSVLEQLYIVKNNIGTTGSIALAEALVVNKGMRSLNMDFNPIGDD 226

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSIS 372
           G    M  L     K+  ++  + SIS
Sbjct: 227 GATPFMKVLREND-KIEKIEFDDKSIS 252



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 99/194 (51%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E  +  R    + ++    GD G   LA+++        +  + +GI   G K   
Sbjct: 61  EALGEALQTNRFLKRLYLNNNRIGDVGCKHLADAIKRVTALGMIDMSMSGIGTQGAKFLG 120

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  N ++ T+ L+ N IG EG K L + L DN  ++ L +S  D+ ++GA A+AE+LK
Sbjct: 121 VSLVLNNSIHTIYLTDNTIGAEGTKALAEGLKDNKKLKVLDISRNDIGNDGAVALAEMLK 180

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            NS+L  L +  N I  +G  +LAEAL+ N  +RSL+++ N  G  GA    K L  N  
Sbjct: 181 VNSVLEQLYIVKNNIGTTGSIALAEALVVNKGMRSLNMDFNPIGDDGATPFMKVLRENDK 240

Query: 332 LRELHLHGNSIGDE 345
           + ++     SI ++
Sbjct: 241 IEKIEFDDKSISED 254



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 8/130 (6%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + L E  K+ +    +D+S  + G++G   LAE L  N   E++    N I   G  
Sbjct: 142 EGTKALAEGLKDNKKLKVLDISRNDIGNDGAVALAEMLKVNSVLEQLYIVKNNIGTTGSI 201

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L  N  +++LN+  NPIGD+G      +L +N  +E+++           K+I+E
Sbjct: 202 ALAEALVVNKGMRSLNMDFNPIGDDGATPFMKVLRENDKIEKIEFDD--------KSISE 253

Query: 269 LLKNNSILRV 278
             KN   +R+
Sbjct: 254 DWKNEFRMRL 263


>gi|109066981|ref|XP_001085719.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1-like [Macaca mulatta]
          Length = 953

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N + ++G  ++AR
Sbjct: 803 CLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I+ + L  N ++ E AK      +++
Sbjct: 923 NTGITEICLNGNLIKPEEAKVYEDEKRII 951



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELRPCFS----RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL+ N  +    LN
Sbjct: 895 -NQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLN 932



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VRELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L +N +   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L +  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N +D     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELDDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L     ++
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLT 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG KCLA + K  +++++ + +  N++ D+GA A A+AL+ +   ++T+
Sbjct: 788 HLKLGKNKITSEGGKCLALAVKN-SKSISDVGMWGNQVGDEGAKAFAEALRNHP--SLTT 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA+N ++  G  +L  A
Sbjct: 845 LSLASNGVSTEGGKSLARA 863


>gi|426377569|ref|XP_004055535.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Gorilla gorilla gorilla]
          Length = 471

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 128/245 (52%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMKESYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    N S+I SL L+GN      A  L + L  N  +++L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G + L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 207 DLSHNQFSDVGGKHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 266 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 NMDGA 330



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 131/262 (50%), Gaps = 3/262 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 151

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  ++ A  +  AL  N  I  +DL  N
Sbjct: 152 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 212 QFSDVGGKHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
             A  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 272 EVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLES-NESLRVLKLFLNPINMDGA 330

Query: 546 FAIAQALKANEDVAVTSLNLAN 567
             +  A+K N    +  L+++N
Sbjct: 331 ILLILAIKRNPKSRMEELDISN 352



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 126/264 (47%), Gaps = 30/264 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 104 GTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 163

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S  G  H+ 
Sbjct: 164 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFSDVGGKHLG 222

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           +       +L IN+                      +T++DL  NN H++GA A+   L+
Sbjct: 223 Q-------MLAINV---------------------GLTSLDLSWNNFHTRGAVALCNGLR 254

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 255 GNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNES 314

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           + +L L  N +  +GA  L  + K
Sbjct: 315 LRVLKLFLNPINMDGAILLILAIK 338



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 91  SYVNLNHHGLGPRGTKAIAIALVSNMAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 151 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 211 NQFSDVGGKHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 271 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 329

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 330 AILLILAIKRN 340



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 128 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 187

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G K L  +L  N G+  L LS  +    GA 
Sbjct: 188 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGKHLGQMLAINVGLTSLDLSWNNFHTRGAV 247

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 248 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 307

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 308 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 358


>gi|387540924|gb|AFJ71089.1| nucleotide-binding oligomerization domain-containing protein 1
           [Macaca mulatta]
          Length = 953

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N + ++G  ++AR
Sbjct: 803 CLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I+ + L  N ++ E AK      +++
Sbjct: 923 NTGITEICLNGNLIKPEEAKVYEDEKRII 951



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELRPCFS----RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL+ N  +    LN
Sbjct: 895 -NQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLN 932



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VRELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L +N +   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L +  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N +D     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELDDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L     ++
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLT 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG KCLA + K  +++++ + +  N++ D+GA A A+AL+ +   ++T+
Sbjct: 788 HLKLGKNKITSEGGKCLALAVKN-SKSISDVGMWGNQVGDEGAKAFAEALRNHP--SLTT 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA+N ++  G  +L  A
Sbjct: 845 LSLASNGVSTEGGKSLARA 863


>gi|301767766|ref|XP_002919315.1| PREDICTED: LOW QUALITY PROTEIN: nucleotide-binding oligomerization
           domain-containing protein 1-like [Ailuropoda
           melanoleuca]
          Length = 962

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S     L V+ +  N I+  G   + E +   K L ++ LY N I D GA 
Sbjct: 728 GVRELQPCFSC----LTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGAR 783

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA  L + + +T + LG N I S+G   +A  +K++  I  + +  N IG +GA A +E
Sbjct: 784 YIARILDECKGLTHLKLGENKITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAE 843

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I   G + +A  L++N T+ I  L  N L DE A+ LA+  K 
Sbjct: 844 ALRNHPSLTNLSLAFNGISTEGGKSLAQALQHNTTLRIFWLTKNELNDEVAESLAEMLK- 902

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           VN+ L  + L  N+I   G   +A AL++N  +    LN
Sbjct: 903 VNQTLKHLWLIQNQITAKGIAQLADALQSNTGIMEICLN 941



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K L  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 753 GVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKG-LTHLKLGENKITSEGGK 811

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  I ++ N IGDEGA   A+AL+ + ++T + L  N I ++G  ++A+
Sbjct: 812 CLALAVKNSKSIFEIGMWGNRIGDEGATAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQ 871

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 872 ALQHNTTLRIFWLTKNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQS 931

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I  + L  N ++ E AK      ++V
Sbjct: 932 NTGIMEICLNGNLIKPEEAKVFEDEKRIV 960



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 108/247 (43%), Gaps = 29/247 (11%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L  + LS N I D GVK L                             E L    IL  
Sbjct: 738 CLTVIRLSVNQITDSGVKVL----------------------------YEELTKYKILTF 769

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L NN I   G   +A  L E   +  L L  N   + G   LA  ++ +KS+ E+ + 
Sbjct: 770 LGLYNNQITDVGARYIARILDECKGLTHLKLGENKITSEGGKCLALAVKNSKSIFEIGMW 829

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           GN IGDEG  A    L +    L  L +  N IS +G   +A+ +++  +L    L  N+
Sbjct: 830 GNRIGDEGATAFAEALRNHPS-LTNLSLAFNGISTEGGKSLAQALQHNTTLRIFWLTKNE 888

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + DE AE +A+ LK N+T+  + L  N I +KG + +A  L+ N+ I  + L  N I  +
Sbjct: 889 LNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQSNTGIMEICLNGNLIKPE 948

Query: 459 GAKALSE 465
            AK   +
Sbjct: 949 EAKVFED 955



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 95/215 (44%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           + E        + + +S     D G+  L E L   +    +    N IT  G +    +
Sbjct: 729 VRELQPCFSCLTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARI 788

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGA A AE L+N+
Sbjct: 789 LDECKGLTHLKLGENKITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEALRNH 848

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L  N I   G  SLA+AL  N+T+R   L  N      A +LA+ L+ N++L+
Sbjct: 849 PSLTNLSLAFNGISTEGGKSLAQALQHNTTLRIFWLTKNELNDEVAESLAEMLKVNQTLK 908

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +GI  L   L S  G + +   GN
Sbjct: 909 HLWLIQNQITAKGIAQLADALQSNTGIMEICLNGN 943



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 93/194 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E   + +  + + +      D G  ++A  L   +    +    N IT+ G K   
Sbjct: 755 KVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGENKITSEGGKCLA 814

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN IGDEG     + L ++  +  L L+   +  EG K++A+ L+
Sbjct: 815 LAVKNSKSIFEIGMWGNRIGDEGATAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQ 874

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           +N+ LR+  L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 875 HNTTLRIFWLTKNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQSNTG 934

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 935 IMEICLNGNLIKPE 948



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++   + M G   GDEG    AE+L  + +   +S A NGI+ 
Sbjct: 804 KITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEALRNHPSLTNLSLAFNGIST 863

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N  L+   L+ N                            +L DE A+
Sbjct: 864 EGGKSLAQALQHNTTLRIFWLTKN----------------------------ELNDEVAE 895

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 896 SLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQSNTGIMEICLNGN 943



 Score = 39.3 bits (90), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 29/59 (49%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
           LAE L  NQT + +    N ITA GI      LQSN  +  + L+GN I  E  K   D
Sbjct: 897 LAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQSNTGIMEICLNGNLIKPEEAKVFED 955


>gi|355560721|gb|EHH17407.1| Caspase recruitment domain-containing protein 4 [Macaca mulatta]
          Length = 953

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N + ++G  ++AR
Sbjct: 803 CLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I+ + L  N ++ E AK      +++
Sbjct: 923 NTGITEICLNGNLIKPEEAKVYEDEKRII 951



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELRPCFS----RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL+ N  +    LN
Sbjct: 895 -NQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLN 932



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VRELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L +N +   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L +  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N +D     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELDDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L     ++
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLT 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG KCLA + K  +++++ + +  N++ D+GA A A+AL+ +   ++T+
Sbjct: 788 HLKLGKNKITSEGGKCLALAVKN-SKSISDVGMWGNQVGDEGAKAFAEALRNHP--SLTT 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA+N ++  G  +L  A
Sbjct: 845 LSLASNGVSTEGGKSLARA 863


>gi|402863820|ref|XP_003896196.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Papio anubis]
          Length = 953

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N + ++G  ++AR
Sbjct: 803 CLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I+ + L  N ++ E AK      +++
Sbjct: 923 NTGITEICLNGNLIKPEEAKVYEDEKRII 951



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   ++E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELRPCFS----RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +   L + + +T + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E
Sbjct: 775 YVTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL+ N  +    LN
Sbjct: 895 -NQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLN 932



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VRELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L     L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L +N +   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L +  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 94/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   +    +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N +D     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 795 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELDDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K LSE L  +  +  L L   QI   GA +V  +L     ++
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLT 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG KCLA + K  +++++ + +  N++ D+GA A A+AL+ +   ++T+
Sbjct: 788 HLKLGKNKITSEGGKCLALAVKN-SKSISDVGMWGNQVGDEGAKAFAEALRNHP--SLTT 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA+N ++  G  +L  A
Sbjct: 845 LSLASNGVSTEGGKSLARA 863


>gi|340505146|gb|EGR31503.1| hypothetical protein IMG5_107210 [Ichthyophthirius multifiliis]
          Length = 733

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 149/305 (48%), Gaps = 18/305 (5%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TLNL+ NPI D G+  +  I+ +N  ++ L L+S  + + G + I + L  N  L+ L+L
Sbjct: 157 TLNLADNPISDNGMHLIKQIM-ENTQIKHLNLASNMISESGFEIIVDELSKNQNLKSLDL 215

Query: 282 -------NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
                    N     G   +A  +L+N  I  + L  N  G  G + +   L+ NK+L+ 
Sbjct: 216 GILEGSIRKNSFGIDGAKCIAALILQNKNIEIIKLYDNDIGVQGGDIIGTALKQNKNLKN 275

Query: 335 LHLHGNSIGDEGIRALM-SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           L +  N +  +G   ++ S L      L  LD+G N I +     +  Y++N ++L  +N
Sbjct: 276 LTISENYLKSQGAEFILKSALF-----LESLDLGKNCIKSNAGISIRNYLQNNQNLKRLN 330

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N++  EG ++    L  ++++  I+L GN I  +G   I  VL DN ++  LD++ N
Sbjct: 331 LEFNELSFEGIKEFRQGLLYSQSLQYINLKGNGIGDEGFLMICEVLNDNYILEELDVSLN 390

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML-RYNNTISI--LDLRANG 510
            I + G K  +++L F G +  + L    +G      + D+  +Y N I +  +D  ++ 
Sbjct: 391 EISSAGIKCFADILPFCG-LKNINLSKNFLGDESLFIIGDICQQYENVIKLQKIDFSSSR 449

Query: 511 LRDEG 515
           + D G
Sbjct: 450 VADAG 454



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 186 LGYNQTAEEVSFAANGITAAGIKAF-DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           L  NQ  + ++   N ++  GIK F  G+L S  +L+ +NL GN IGDEG   +C++L D
Sbjct: 320 LQNNQNLKRLNLEFNELSFEGIKEFRQGLLYSQ-SLQYINLKGNGIGDEGFLMICEVLND 378

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELL 270
           N  +E L +S  ++   G K  A++L
Sbjct: 379 NYILEELDVSLNEISSAGIKCFADIL 404



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 33/255 (12%)

Query: 193 EEVSFAANGITA-AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
           E +    N I + AGI +    LQ+N  LK LNL  N +  EG+K     L+ +  ++ +
Sbjct: 299 ESLDLGKNCIKSNAGI-SIRNYLQNNQNLKRLNLEFNELSFEGIKEFRQGLLYSQSLQYI 357

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
            L    + DEG   I E+L +N IL  L+++ N I  +G    A+ L             
Sbjct: 358 NLKGNGIGDEGFLMICEVLNDNYILEELDVSLNEISSAGIKCFADIL------------- 404

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG--KLAVLDIGNN 369
            + G                L+ ++L  N +GDE +  +       +   KL  +D  ++
Sbjct: 405 PFCG----------------LKNINLSKNFLGDESLFIIGDICQQYENVIKLQKIDFSSS 448

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            ++  G  +  + I   +++  I    N I ++  + + + L +N+T+    + GN +  
Sbjct: 449 RVADAGILYFLDRIDYFENMRCIKCQDNFISEKVEKVLLEILIKNKTLIEFGINGNRLSL 508

Query: 430 KGASAIARVLKDNSV 444
              + + ++L+ N +
Sbjct: 509 SFLNKVKKILQRNII 523


>gi|348584658|ref|XP_003478089.1| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Cavia porcellus]
          Length = 421

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 31/290 (10%)

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
           V   C +  +NA    L L    L  +GA+A+A +L +N  ++ L+L +N +  +G  +L
Sbjct: 102 VPVSCFLRQENAA--ELSLRHRGLGPQGAQALASMLTSNPYIKRLDLRDNGLCVAGAEAL 159

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A+ L +NS+I  + L+ N  GA G  AL   L  N++++++ L GN + ++  + L   L
Sbjct: 160 ADVLSKNSSISDVDLSENQFGAPGVQALCAALTVNQAVQKMKLAGNGLEEQAAKYLADLL 219

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
               G                             L  ++L  N + D+  E +  AL +N
Sbjct: 220 LVHTG-----------------------------LKSLDLSYNQLNDQAGETLGPALAEN 250

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
             +T +D+  N++   GA A AR L+ N  +  LD++YN  G  GA A++E LK +  + 
Sbjct: 251 TGLTELDISWNHLRGPGAIAFARGLEANIFLKVLDISYNGFGDLGALAVAEALKVNNVLE 310

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
            L +   +I A+GA  +   LR N T+ IL +  N ++ EG   L +S +
Sbjct: 311 ELNMSNNRIFAAGALSLGMDLRVNQTLRILVVSRNPMQSEGCFGLLKSVQ 360



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 31/282 (10%)

Query: 172 RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           R  G +G   LA  L  N   + +    NG+  AG +A   VL  N ++  ++LS N  G
Sbjct: 121 RGLGPQGAQALASMLTSNPYIKRLDLRDNGLCVAGAEALADVLSKNSSISDVDLSENQFG 180

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
             GV+ LC  L  N  V++++L+   L ++ AK +A+LL  ++ L+ L+L+ N ++    
Sbjct: 181 APGVQALCAALTVNQAVQKMKLAGNGLEEQAAKYLADLLLVHTGLKSLDLSYNQLNDQAG 240

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            +L  AL EN+ +  L ++ N+    GA A A+GLE N  L+                  
Sbjct: 241 ETLGPALAENTGLTELDISWNHLRGPGAIAFARGLEANIFLK------------------ 282

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
                      VLDI  N     GA  VAE +K    L  +N+  N I   GA  +   L
Sbjct: 283 -----------VLDISYNGFGDLGALAVAEALKVNNVLEELNMSNNRIFAAGALSLGMDL 331

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLA 451
           + N+T+  + +  N + S+G   + + ++DN  S +  LD++
Sbjct: 332 RVNQTLRILVVSRNPMQSEGCFGLLKSVQDNTASALELLDIS 373



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 30/289 (10%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L +  +   G  +LA  L  N  I+ L L  N     GA ALA  L  N S+ ++ L 
Sbjct: 116 LSLRHRGLGPQGAQALASMLTSNPYIKRLDLRDNGLCVAGAEALADVLSKNSSISDVDLS 175

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N  G  G++AL + L+  +  +  + +  N +  + A ++A+ +     L  ++L  N 
Sbjct: 176 ENQFGAPGVQALCAALTVNQA-VQKMKLAGNGLEEQAAKYLADLLLVHTGLKSLDLSYNQ 234

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + D+  E +  AL +N  +T +D+  N++   GA A AR L+ N  +  LD++YN  G  
Sbjct: 235 LNDQAGETLGPALAENTGLTELDISWNHLRGPGAIAFARGLEANIFLKVLDISYNGFGDL 294

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA A++E LK +  +  L +   +I A+GA  +   LR N T+ IL +  N ++ E    
Sbjct: 295 GALAVAEALKVNNVLEELNMSNNRIFAAGALSLGMDLRVNQTLRILVVSRNPMQSE---- 350

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
                                    G F + ++++ N   A+  L++++
Sbjct: 351 -------------------------GCFGLLKSVQDNTASALELLDISD 374



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 5/228 (2%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R+   A L + +  +  +GA  +A  + +   +  ++L  N +   GAE +AD L +N +
Sbjct: 109 RQENAAELSLRHRGLGPQGAQALASMLTSNPYIKRLDLRDNGLCVAGAEALADVLSKNSS 168

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I+ +DL  N   + G  A+   L  N  +  + LA N +    AK L+++L  H  + +L
Sbjct: 169 ISDVDLSENQFGAPGVQALCAALTVNQAVQKMKLAGNGLEEQAAKYLADLLLVHTGLKSL 228

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L + Q+     E +   L  N  ++ LD+  N LR  GA   A+  +  N  L  +D++
Sbjct: 229 DLSYNQLNDQAGETLGPALAENTGLTELDISWNHLRGPGAIAFARGLE-ANIFLKVLDIS 287

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           +N   D GA A+A+ALK N    +  LN++NN +  F   AL+   DL
Sbjct: 288 YNGFGDLGALAVAEALKVNN--VLEELNMSNNRI--FAAGALSLGMDL 331



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 1/213 (0%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + S VD+S   FG  G+  L  +L  NQ  +++  A NG+     K    +L  +  LK+
Sbjct: 168 SISDVDLSENQFGAPGVQALCAALTVNQAVQKMKLAGNGLEEQAAKYLADLLLVHTGLKS 227

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N + D+  + L   L +N G+  L +S   LR  GA A A  L+ N  L+VL+++
Sbjct: 228 LDLSYNQLNDQAGETLGPALAENTGLTELDISWNHLRGPGAIAFARGLEANIFLKVLDIS 287

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N     G  ++AEAL  N+ +  L+++ N   A GA +L   L  N++LR L +  N +
Sbjct: 288 YNGFGDLGALAVAEALKVNNVLEELNMSNNRIFAAGALSLGMDLRVNQTLRILVVSRNPM 347

Query: 343 GDEGIRALMSGLSSRKGK-LAVLDIGNNSISAK 374
             EG   L+  +       L +LDI +  ++ K
Sbjct: 348 QSEGCFGLLKSVQDNTASALELLDISDIEVNRK 380


>gi|320164479|gb|EFW41378.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 348

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 3/193 (1%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + +  I   GA  +A+ +K    L W++L  N IGD G + IA +LK N T+T + L  N
Sbjct: 4   LSDAQIGDAGAQAIAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSNN 63

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            I   G  AIA+ LK N  +T L LA N IG  GA+A++EVLK +  +  L L   QIG 
Sbjct: 64  QIGDSGVQAIAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIGD 123

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA+ VA+ L+ N+ ++ L LR+N + + G + L ++ KV       ID  ++++ +  A
Sbjct: 124 VGAQGVAEALKVNSKLNQLSLRSNCIGNLGFQALDETSKVT--CRIEIDRYYDQV-NPLA 180

Query: 546 FAIAQALKANEDV 558
           F++   L   +D+
Sbjct: 181 FSLLPRLATAKDI 193



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/137 (41%), Positives = 79/137 (57%), Gaps = 1/137 (0%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IGD G +A+   L +   +L  LD+ NN I   G   +A+ +K  ++L  ++L  N IGD
Sbjct: 9   IGDAGAQAIAKALKANT-RLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSNNQIGD 67

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            G + IA +LK N T+T + L GN I   GA AIA VLK NS +T L L  N IG  GA+
Sbjct: 68  SGVQAIAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIGDVGAQ 127

Query: 462 ALSEVLKFHGNINTLKL 478
            ++E LK +  +N L L
Sbjct: 128 GVAEALKVNSKLNQLSL 144



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 89/159 (55%), Gaps = 3/159 (1%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L    I   GA AIA+ LK N+ +T LDL+ N IG  G +A+++ LK +  +  L L   
Sbjct: 4   LSDAQIGDAGAQAIAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSNN 63

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           QIG SG + +A  L+ N T++ L L  N + D GA+ +A+  KV N  LT + L  N+I 
Sbjct: 64  QIGDSGVQAIAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKV-NSTLTELSLHENQIG 122

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           D GA  +A+ALK N    +  L+L +N +   G  AL +
Sbjct: 123 DVGAQGVAEALKVNS--KLNQLSLRSNCIGNLGFQALDE 159



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 84/155 (54%)

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           S +   I  AG +A    L++N  L  L+LS N IGD GV+ +   L  N  +  L LS+
Sbjct: 3   SLSDAQIGDAGAQAIAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSN 62

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             + D G +AIA+ LK N  L  L L  N I  +G  ++AE L  NST+  L L+ N  G
Sbjct: 63  NQIGDSGVQAIAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIG 122

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            +GA  +A+ L+ N  L +L L  N IG+ G +AL
Sbjct: 123 DVGAQGVAEALKVNSKLNQLSLRSNCIGNLGFQAL 157



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 90/176 (51%), Gaps = 2/176 (1%)

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS   IGD G + +   L  N  +  L LS+  + D G +AIA+ LK N  L  L L+N
Sbjct: 3   SLSDAQIGDAGAQAIAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSN 62

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I  SG  ++A++L  N T+  LHL GN  G  GA A+A+ L+ N +L EL LH N IG
Sbjct: 63  NQIGDSGVQAIAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIG 122

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           D G + +   L     KL  L + +N I   G F   +        + I+ Y + +
Sbjct: 123 DVGAQGVAEALKV-NSKLNQLSLRSNCIGNLG-FQALDETSKVTCRIEIDRYYDQV 176



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 80/154 (51%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GD G   +A++L  N     +  + N I  +G++A    L++N  L  L+LS N
Sbjct: 4   LSDAQIGDAGAQAIAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSNN 63

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD GV+ +   L  N  +  L L+   + D GA+AIAE+LK NS L  L L+ N I  
Sbjct: 64  QIGDSGVQAIAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIGD 123

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            G   +AEAL  NS +  L L  N  G LG  AL
Sbjct: 124 VGAQGVAEALKVNSKLNQLSLRSNCIGNLGFQAL 157



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 79/143 (55%), Gaps = 3/143 (2%)

Query: 157 FAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            AK L+A    + +D+S    GD G+  +A+SL  N+T   +  + N I  +G++A    
Sbjct: 17  IAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSNNQIGDSGVQAIAKS 76

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L++N  L  L+L+GN IGD G + + ++L  N+ +  L L    + D GA+ +AE LK N
Sbjct: 77  LKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIGDVGAQGVAEALKVN 136

Query: 274 SILRVLELNNNMIDYSGFTSLAE 296
           S L  L L +N I   GF +L E
Sbjct: 137 SKLNQLSLRSNCIGNLGFQALDE 159



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 3/127 (2%)

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA+A+++ LK +  +  L L   QIG SG + +A  L+ N T++ L L  N + D 
Sbjct: 9   IGDAGAQAIAKALKANTRLTWLDLSNNQIGDSGVQAIAKSLKANETLTGLHLSNNQIGDS 68

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           G + +A+S K  NE LT + LA N I D GA AIA+ LK N    +T L+L  N +   G
Sbjct: 69  GVQAIAKSLKA-NETLTGLHLAGNRIGDAGAQAIAEVLKVNS--TLTELSLHENQIGDVG 125

Query: 575 QSALTDA 581
              + +A
Sbjct: 126 AQGVAEA 132



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 10/98 (10%)

Query: 157 FAKELRA---FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            AK L+A    + + ++G   GD G   +AE L  N T  E+S   N I   G +     
Sbjct: 73  IAKSLKANETLTGLHLAGNRIGDAGAQAIAEVLKVNSTLTELSLHENQIGDVGAQGVAEA 132

Query: 214 LQSNIALKTLNLSGNPIG-------DEGVKCLCDILVD 244
           L+ N  L  L+L  N IG       DE  K  C I +D
Sbjct: 133 LKVNSKLNQLSLRSNCIGNLGFQALDETSKVTCRIEID 170


>gi|432945011|ref|XP_004083482.1| PREDICTED: T-complex-associated testis-expressed protein 1-like
           [Oryzias latipes]
          Length = 433

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 120/226 (53%), Gaps = 5/226 (2%)

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + Y    +LA+AL    T++   L+ ++        L K L  + SL EL    N IGD 
Sbjct: 202 MTYRDCETLAKALQSCKTLKLFRLHQSHMDDRKCQLLVKHLMDHPSLEELDFCHNKIGDV 261

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI-KNCKSLLWINLYMNDIGDEGA 404
           G RA+   L+  + KL  L++ NN IS +GA  +A  + KNC +L  +NL +N I DEG 
Sbjct: 262 GARAISKLLT--RNKLQTLNLCNNLISCQGAKAIALALSKNC-TLESLNLLLNMIKDEGG 318

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           + IA+AL  N T+  ++LGGN + S  A A+++VL +N+ + SL+L+ N +   G +AL 
Sbjct: 319 QAIAEALLNNTTLHNLNLGGNYLTSVTAEAVSKVLTENTTLQSLNLSCNQLCEVGGEALV 378

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
             L  +  I    +   Q+    + F+ + L + N +S L  +  G
Sbjct: 379 AALSQNSTIKECDVHLTQVDDQRS-FLINKLLWANQMSQLKTQRKG 423



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 4/208 (1%)

Query: 141 GFTGKLFRESKQTLNEFAKELRAFSSVDM---SGRNFGDEGLFFLAESLGYNQTAEEVSF 197
            F   +F  + +     AK L++  ++ +      +  D     L + L  + + EE+ F
Sbjct: 194 NFAWNMFEMTYRDCETLAKALQSCKTLKLFRLHQSHMDDRKCQLLVKHLMDHPSLEELDF 253

Query: 198 AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
             N I   G +A   +L  N  L+TLNL  N I  +G K +   L  N  +E L L    
Sbjct: 254 CHNKIGDVGARAISKLLTRN-KLQTLNLCNNLISCQGAKAIALALSKNCTLESLNLLLNM 312

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           ++DEG +AIAE L NN+ L  L L  N +      ++++ L EN+T++SL+L+ N    +
Sbjct: 313 IKDEGGQAIAEALLNNTTLHNLNLGGNYLTSVTAEAVSKVLTENTTLQSLNLSCNQLCEV 372

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDE 345
           G  AL   L  N +++E  +H   + D+
Sbjct: 373 GGEALVAALSQNSTIKECDVHLTQVDDQ 400



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 162/390 (41%), Gaps = 42/390 (10%)

Query: 24  SRSFCQARDAPLSFALPFSGT----------RRCFRLKRLVVKAAARPEGGRRQRRVYRQ 73
            + F Q R   LS +LP   T          RRC + K      +     G   +R++ +
Sbjct: 45  QKEFLQER---LSLSLPVQVTASVLPEGPYWRRCCQQKLAFCDVSVH---GHSWKRMFLE 98

Query: 74  SQSDNALTTAPVKQIASFVVPAGVFVSATFVLWKLVEKLLMP--KPSRPSKPTAEGMNWS 131
              +  +            V   V V   +V    + +LL+P  +P + SK      +W 
Sbjct: 99  KHLEKIIELFIPNVTDPQTVLDVVSVCEKYVKRLDISQLLVPVVEPQKKSKENDHDFHWK 158

Query: 132 VGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLF--------FLA 183
                  +  F   +  +    L    +EL     +   G NF    +F         LA
Sbjct: 159 RYVPP--MDHFDFNILLQRLTNL----EELHLVYRIKQCGMNFA-WNMFEMTYRDCETLA 211

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           ++L   +T +      + +     +     L  + +L+ L+   N IGD G + +  +L 
Sbjct: 212 KALQSCKTLKLFRLHQSHMDDRKCQLLVKHLMDHPSLEELDFCHNKIGDVGARAISKLLT 271

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
            N  ++ L L +  +  +GAKAIA  L  N  L  L L  NMI   G  ++AEALL N+T
Sbjct: 272 RN-KLQTLNLCNNLISCQGAKAIALALSKNCTLESLNLLLNMIKDEGGQAIAEALLNNTT 330

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           + +L+L GNY  ++ A A++K L  N +L+ L+L  N + + G  AL++ L S+   +  
Sbjct: 331 LHNLNLGGNYLTSVTAEAVSKVLTENTTLQSLNLSCNQLCEVGGEALVAAL-SQNSTIKE 389

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            D+    +  + +F +         LLW N
Sbjct: 390 CDVHLTQVDDQRSFLI-------NKLLWAN 412



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 31/238 (13%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              LAK L+  K+L+   LH + + D            RK +L V               
Sbjct: 207 CETLAKALQSCKTLKLFRLHQSHMDD------------RKCQLLV--------------- 239

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
             +++ +  SL  ++   N IGD GA  I+  L +N+ + T++L  N I  +GA AIA  
Sbjct: 240 --KHLMDHPSLEELDFCHNKIGDVGARAISKLLTRNK-LQTLNLCNNLISCQGAKAIALA 296

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  N  + SL+L  N I  +G +A++E L  +  ++ L LG   + +  AE V+ +L  N
Sbjct: 297 LSKNCTLESLNLLLNMIKDEGGQAIAEALLNNTTLHNLNLGGNYLTSVTAEAVSKVLTEN 356

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            T+  L+L  N L + G + L  +    N  +   D+   ++ D  +F I + L AN+
Sbjct: 357 TTLQSLNLSCNQLCEVGGEALVAALS-QNSTIKECDVHLTQVDDQRSFLINKLLWANQ 413



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           DEG   +AE+L  N T   ++   N +T+   +A   VL  N  L++LNLS N + + G 
Sbjct: 315 DEGGQAIAEALLNNTTLHNLNLGGNYLTSVTAEAVSKVLTENTTLQSLNLSCNQLCEVGG 374

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           + L   L  N+ ++   +    + D+ +  I +LL  N +
Sbjct: 375 EALVAALSQNSTIKECDVHLTQVDDQRSFLINKLLWANQM 414


>gi|332818323|ref|XP_001162186.2| PREDICTED: leucine-rich repeat-containing protein 34 isoform 2 [Pan
           troglodytes]
 gi|397493673|ref|XP_003817725.1| PREDICTED: leucine-rich repeat-containing protein 34 isoform 2 [Pan
           paniscus]
          Length = 432

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+G N +   GA++ A+ ++   +L+++NL  NDIG EG E IA  L +NRT+  + + 
Sbjct: 128 LDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMT 187

Query: 424 GNNIHSKG---------------------------ASAIARVLKDNSVITSLDLAYNPIG 456
           GN I +KG                              + R+LK+N  + +L +  + I 
Sbjct: 188 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLEESTVHVGRMLKENHCLVALHMCKHDIK 247

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G + L + L  + ++  L +   +I   G  ++AD+L+ N T+ ++DL  N + + GA
Sbjct: 248 NSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGA 307

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             L+++    N +L ++ +  N I  +G  A++Q++K N
Sbjct: 308 NYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTN 346



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 123/269 (45%), Gaps = 3/269 (1%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +T         +L++ + +  L++  N + D G      +L     +  L L   D+  E
Sbjct: 107 VTGEDFWILSKILKNCLYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPE 166

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G + IA++L  N  L+ L +  N I+  G    A  L  NS++  L L G+         
Sbjct: 167 GGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDL-GDCDLEESTVH 225

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           + + L+ N  L  LH+  + I + GI+ L   L      L  LD+  N I+  G  ++A+
Sbjct: 226 VGRMLKENHCLVALHMCKHDIKNSGIQQLCDALY-LNSSLRYLDVSCNKITHDGMVYLAD 284

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLK 440
            +K+  +L  I+L  N I + GA  +++ L   NR++  + +  NNI  +G  A+++ +K
Sbjct: 285 VLKSNTTLEVIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMK 344

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKF 469
            N   + + +  N        A S++++ 
Sbjct: 345 TNLTFSHIYIWGNKFDEATCVAYSDLIQM 373



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 1/259 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L++  K     + +D+      D G ++ A+ L        ++   N I   G +    V
Sbjct: 115 LSKILKNCLYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKV 174

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  LK L ++GN I ++G      +L  N+ +E+L L   DL +E    +  +LK N
Sbjct: 175 LHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDL-EESTVHVGRMLKEN 233

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L +  + I  SG   L +AL  NS++R L ++ N     G   LA  L+ N +L 
Sbjct: 234 HCLVALHMCKHDIKNSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLE 293

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            + L  N I + G   L   L+S    L  L + +N+I  +G   +++ +K   +   I 
Sbjct: 294 VIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTNLTFSHIY 353

Query: 394 LYMNDIGDEGAEKIADALK 412
           ++ N   +      +D ++
Sbjct: 354 IWGNKFDEATCVAYSDLIQ 372



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 14/197 (7%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN-------IHSKGASAIARVLKDNSV 444
           IN ++  I  E  E+I   L       T+++ GNN       +  +    ++++LK+   
Sbjct: 68  INPFILHILQEVDEEIKKGLAAG---ITLNIAGNNRLVPVERVTGEDFWILSKILKNCLY 124

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           I  LD+ YN +   GA   +++L+   N+  L L +  IG  G E +A +L  N T+  L
Sbjct: 125 INGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYL 184

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            +  N + ++G    A   + +N +L  +DL   ++ ++    + + LK N    + +L+
Sbjct: 185 RMTGNKIENKGGMFFAAMLQ-INSSLEKLDLGDCDL-EESTVHVGRMLKENH--CLVALH 240

Query: 565 LANNFLTKFGQSALTDA 581
           +  + +   G   L DA
Sbjct: 241 MCKHDIKNSGIQQLCDA 257


>gi|386333501|ref|YP_006029671.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
 gi|334195950|gb|AEG69135.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
          Length = 462

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 43/301 (14%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++++     GD G+   A     N+    ++ + NGI  AG++A    L +N  + TL
Sbjct: 195 LTALNLRRNAIGDAGVAAFAR----NKKLTTLNVSGNGIGPAGVRA----LAANTTITTL 246

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++S N IGDEG + L      NA + RL  S   +  +G +A+A     ++ L  L+L+ 
Sbjct: 247 DISDNEIGDEGARAL----ASNAALTRLDASDCGIGPDGTQALA----TSTTLTSLDLSY 298

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I+  G     EAL  N+T+R+LH  GN  G   A  LA     + +L  L+L  N+IG
Sbjct: 299 NEIEAEGV----EALGRNTTLRTLHACGNELGHREAELLA----ASTTLTVLNLSSNAIG 350

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           + G RA  +  +     LA L++ NN I    A+       +   L  ++L  N IGD  
Sbjct: 351 NAGARAFGANTT-----LAELNLSNNGIERVPAW------ADTGKLTTLDLSNNRIGDAA 399

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A+ +A     +RT+TT+++G N I   GA A+A     N+ + +LD++ N IG  G  AL
Sbjct: 400 AQVLA----ASRTLTTLNVGSNRIGDAGACALA----GNTTLATLDVSLNRIGKAGMLAL 451

Query: 464 S 464
           +
Sbjct: 452 A 452



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 129/273 (47%), Gaps = 48/273 (17%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L G+ +L  L+L  N+IGD G+ A      +R  KL  L++  N I   G   +A  
Sbjct: 186 ARLLAGHATLTALNLRRNAIGDAGVAAF-----ARNKKLTTLNVSGNGIGPAGVRALAAN 240

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                ++  +++  N+IGDEGA     AL  N  +T +D     I   G  A+A     +
Sbjct: 241 T----TITTLDISDNEIGDEGAR----ALASNAALTRLDASDCGIGPDGTQALA----TS 288

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +TSLDL+YN I A+G +AL      +  + TL     ++G   AE +A     + T++
Sbjct: 289 TTLTSLDLSYNEIEAEGVEALGR----NTTLRTLHACGNELGHREAELLA----ASTTLT 340

Query: 503 ILDLRANGLRDEGAKCLAQSFKVV-----------------NEALTSIDLAFNEIRDDGA 545
           +L+L +N + + GA+    +  +                     LT++DL+ N I D   
Sbjct: 341 VLNLSSNAIGNAGARAFGANTTLAELNLSNNGIERVPAWADTGKLTTLDLSNNRIGD--- 397

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
            A AQ L A+    +T+LN+ +N +   G  AL
Sbjct: 398 -AAAQVLAASR--TLTTLNVGSNRIGDAGACAL 427



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 45/229 (19%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+    ++A  A  +A +     +L  +NL  N IGD G      A  +N+ +TT+++ 
Sbjct: 174 LDVSGCGLNADSARLLAGH----ATLTALNLRRNAIGDAGVA----AFARNKKLTTLNVS 225

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I   G     R L  N+ IT+LD++ N IG +GA+AL+     +  +  L    C I
Sbjct: 226 GNGIGPAGV----RALAANTTITTLDISDNEIGDEGARALAS----NAALTRLDASDCGI 277

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV------------------ 525
           G  G + +A     + T++ LDL  N +  EG + L ++  +                  
Sbjct: 278 GPDGTQALA----TSTTLTSLDLSYNEIEAEGVEALGRNTTLRTLHACGNELGHREAELL 333

Query: 526 -VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
             +  LT ++L+ N I + G    A+A  AN  +A   LNL+NN + + 
Sbjct: 334 AASTTLTVLNLSSNAIGNAG----ARAFGANTTLA--ELNLSNNGIERV 376



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 54/233 (23%)

Query: 164 FSSVDMSGRNFGDEGLFFLA--------------------ESLGYNQTAEEVSFAANGIT 203
            +++D+S    GDEG   LA                    ++L  + T   +  + N I 
Sbjct: 243 ITTLDISDNEIGDEGARALASNAALTRLDASDCGIGPDGTQALATSTTLTSLDLSYNEIE 302

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           A G++A    L  N  L+TL+  GN +G        ++L  +  +  L LSS  + + GA
Sbjct: 303 AEGVEA----LGRNTTLRTLHACGNELGHREA----ELLAASTTLTVLNLSSNAIGNAGA 354

Query: 264 KA------IAEL-LKNNSILRV-----------LELNNNMIDYSGFTSLAEALLENSTIR 305
           +A      +AEL L NN I RV           L+L+NN I  +     A+ L  + T+ 
Sbjct: 355 RAFGANTTLAELNLSNNGIERVPAWADTGKLTTLDLSNNRIGDAA----AQVLAASRTLT 410

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           +L++  N  G  GA ALA    GN +L  L +  N IG  G+ AL +  + +K
Sbjct: 411 TLNVGSNRIGDAGACALA----GNTTLATLDVSLNRIGKAGMLALAANTTLKK 459


>gi|297672456|ref|XP_002814313.1| PREDICTED: leucine-rich repeat-containing protein 34 isoform 2
           [Pongo abelii]
          Length = 432

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 123/249 (49%), Gaps = 32/249 (12%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+G N +   GA++ A+ ++   +L+++NL  NDIG EG E IA  L +NRT+  + + 
Sbjct: 128 LDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMT 187

Query: 424 GNNIHSKG---------------------------ASAIARVLKDNSVITSLDLAYNPIG 456
           GN I +KG                              + R+LK+N  + +L +  + I 
Sbjct: 188 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLEESTVHVGRMLKENHCLVALHMCKHDIK 247

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G + L + L  + ++  L +   +I   G  ++AD+L+ N T+ ++DL  N + + GA
Sbjct: 248 NSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGA 307

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 576
             L+++    N +L ++ +  N I  +G  A++Q++K N  +  + + +  N   KF ++
Sbjct: 308 NYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTN--LTFSHIYIWGN---KFDEA 362

Query: 577 ALTDAKDLV 585
                 DL+
Sbjct: 363 TCVAYSDLI 371



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 123/269 (45%), Gaps = 3/269 (1%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +T         +L++ + +  L++  N + D G      +L     +  L L   D+  E
Sbjct: 107 VTGEDFWILSKILKNCLYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPE 166

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G + IA++L  N  L+ L +  N I+  G    A  L  NS++  L L G+         
Sbjct: 167 GGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDL-GDCDLEESTVH 225

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           + + L+ N  L  LH+  + I + GI+ L   L      L  LD+  N I+  G  ++A+
Sbjct: 226 VGRMLKENHCLVALHMCKHDIKNSGIQQLCDALY-LNSSLRYLDVSCNKITHDGMVYLAD 284

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLK 440
            +K+  +L  I+L  N I + GA  +++ L   NR++  + +  NNI  +G  A+++ +K
Sbjct: 285 VLKSNTTLEVIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMK 344

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKF 469
            N   + + +  N        A S++++ 
Sbjct: 345 TNLTFSHIYIWGNKFDEATCVAYSDLIQM 373



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 1/259 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L++  K     + +D+      D G ++ A+ L        ++   N I   G +    V
Sbjct: 115 LSKILKNCLYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKV 174

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  LK L ++GN I ++G      +L  N+ +E+L L   DL +E    +  +LK N
Sbjct: 175 LHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDL-EESTVHVGRMLKEN 233

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L +  + I  SG   L +AL  NS++R L ++ N     G   LA  L+ N +L 
Sbjct: 234 HCLVALHMCKHDIKNSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLE 293

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            + L  N I + G   L   L+S    L  L + +N+I  +G   +++ +K   +   I 
Sbjct: 294 VIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTNLTFSHIY 353

Query: 394 LYMNDIGDEGAEKIADALK 412
           ++ N   +      +D ++
Sbjct: 354 IWGNKFDEATCVAYSDLIQ 372



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 14/197 (7%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN-------IHSKGASAIARVLKDNSV 444
           IN ++  I  E  E+I   L       T+++ GNN       +  +    ++++LK+   
Sbjct: 68  INPFILHILQEVDEEIKKGLAAG---ITLNIAGNNRLVPVERVTGEDFWILSKILKNCLY 124

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           I  LD+ YN +   GA   +++L+   N+  L L +  IG  G E +A +L  N T+  L
Sbjct: 125 INGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYL 184

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            +  N + ++G    A   + +N +L  +DL   ++ ++    + + LK N    + +L+
Sbjct: 185 RMTGNKIENKGGMFFAAMLQ-INSSLEKLDLGDCDL-EESTVHVGRMLKENH--CLVALH 240

Query: 565 LANNFLTKFGQSALTDA 581
           +  + +   G   L DA
Sbjct: 241 MCKHDIKNSGIQQLCDA 257


>gi|407402853|gb|EKF29300.1| hypothetical protein MOQ_006924, partial [Trypanosoma cruzi
           marinkellei]
          Length = 486

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 185/363 (50%), Gaps = 7/363 (1%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +++ ++ ++L  N +G E  + +  +L +++ V  + L   ++  EG  A+A ++  ++ 
Sbjct: 97  ADVPVRVVDLIDNQLGPEQTQKIASML-ESSTVRDVLLRYNEIGKEGCDALANVVNVSTK 155

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L++L++  N +  +    L +++  ++ +  L L+ N  G  GA  L + LE N  L+ L
Sbjct: 156 LQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNAYLKSL 215

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N IG  G  ++   L+     L  L +  N +   G   +A  +K  K L  + L 
Sbjct: 216 DLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQLIANAVKGNKCLTDLTLG 275

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNP 454
            N+  D  AE +A+ LK+N T+ T+DL  N + + G   +AR  L +N  + SL L+ NP
Sbjct: 276 NNNATDAAAEALAEMLKENSTLETLDLRSNTLTATGVRILARDGLANNMFLVSLSLSANP 335

Query: 455 IGADGAKALSEVLKFH--GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           IG+ GA  +++ L  H  G +  L L  C++G +G   +A ++    T++ ++L  N L 
Sbjct: 336 IGSVGADEIAKTLIMHQGGALARLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLD 395

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           +E A  L++S        + +DL+ NEI + GA  +  A + N    ++SL L  N + +
Sbjct: 396 NEAAVVLSRSIVNSISI-SIVDLSANEIGEWGASNLIDATQLN--ARISSLLLHGNSINR 452

Query: 573 FGQ 575
             Q
Sbjct: 453 IVQ 455



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 149/308 (48%), Gaps = 3/308 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G EG   LA  +  +   + +    NG+TAA ++     +  + AL  L LS N IG E
Sbjct: 138 IGKEGCDALANVVNVSTKLQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHE 197

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLELNNNMIDYSGFT 292
           G   L   L  NA ++ L LS  ++   GA++IA LL    S L+ L+L  N +  +G  
Sbjct: 198 GAALLFRALEKNAYLKSLDLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQ 257

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +A A+  N  +  L L  N      A ALA+ L+ N +L  L L  N++   G+R L  
Sbjct: 258 LIANAVKGNKCLTDLTLGNNNATDAAAEALAEMLKENSTLETLDLRSNTLTATGVRILAR 317

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              +    L  L +  N I + GA  +A+   +    +L  ++L   ++G  G  +IA  
Sbjct: 318 DGLANNMFLVSLSLSANPIGSVGADEIAKTLIMHQGGALARLDLSSCELGPTGGMRIASL 377

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           +    T+  ++L GN + ++ A  ++R + ++  I+ +DL+ N IG  GA  L +  + +
Sbjct: 378 IAATITLNEVNLSGNQLDNEAAVVLSRSIVNSISISIVDLSANEIGEWGASNLIDATQLN 437

Query: 471 GNINTLKL 478
             I++L L
Sbjct: 438 ARISSLLL 445



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 166/349 (47%), Gaps = 6/349 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+     G E    +A S+  + T  +V    N I   G  A   V+  +  L+ L++ 
Sbjct: 104 VDLIDNQLGPEQTQKIA-SMLESSTVRDVLLRYNEIGKEGCDALANVVNVSTKLQLLDIR 162

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +    V+ L   +  +  + RL LS+  +  EGA  +   L+ N+ L+ L+L+ N I
Sbjct: 163 GNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNAYLKSLDLSLNEI 222

Query: 287 DYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
             SG  S+A  L L  S +++L L GN+ G  G   +A  ++GNK L +L L GN+   +
Sbjct: 223 GPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVQLIANAVKGNKCLTDLTL-GNNNATD 281

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGA 404
                ++ +      L  LD+ +N+++A G   +A + + N   L+ ++L  N IG  GA
Sbjct: 282 AAAEALAEMLKENSTLETLDLRSNTLTATGVRILARDGLANNMFLVSLSLSANPIGSVGA 341

Query: 405 EKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           ++IA  L   Q   +  +DL    +   G   IA ++     +  ++L+ N +  + A  
Sbjct: 342 DEIAKTLIMHQGGALARLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVV 401

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           LS  +    +I+ + L   +IG  GA  + D  + N  IS L L  N +
Sbjct: 402 LSRSIVNSISISIVDLSANEIGEWGASNLIDATQLNARISSLLLHGNSI 450


>gi|401423736|ref|XP_003876354.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322492596|emb|CBZ27873.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 473

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 161/340 (47%), Gaps = 5/340 (1%)

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           +S+  + T++   N +G  G   +   L +++ V  + +   D+  EG   +A ++  + 
Sbjct: 73  ESDTPIHTIDFMDNQLGPTGAAKIASCL-ESSPVTEVFICYNDIGKEGCDGLAGVVNVSH 131

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L+VL++  N +  S    L  ++  ++ ++ L L  N     GA  +AK LE N  L  
Sbjct: 132 SLQVLDIRGNHLSASDVQRLLRSVSMSTALKRLGLASNRLDPEGAALVAKALERNTYLSS 191

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N +G  G   L   L +    L VL +  N +   G   + + +K  + L  + L
Sbjct: 192 LDLSVNELGPSGAECLAGILRTSVSVLQVLQLHGNYLGPTGVIAICDAVKTNRELKRLTL 251

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYN 453
             N   DE A  IA  L+ N T+  +D+  N + + G   IA+  L  N+ +  L L+ N
Sbjct: 252 GNNHATDEAAGGIAAMLEANETLEELDIRLNTLTANGVRTIAQQGLAKNTSLAVLSLSGN 311

Query: 454 PIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            +G  GA  L++VL  H    +  L L  C + ASG   VA +L  + ++  ++L  N L
Sbjct: 312 EVGPVGANELTQVLTSHQRSVLEKLDLSSCGLTASGGFRVASLLSTSISLKEINLSDNAL 371

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
            DE A  LAQ+  +    ++ +D++ N I ++GA  +  A
Sbjct: 372 DDEAAARLAQNI-MDGITISVVDVSCNNIGEEGASQLIDA 410



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 141/308 (45%), Gaps = 29/308 (9%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA-LK 221
           A   + ++      EG   +A++L  N     +  + N +  +G +   G+L+++++ L+
Sbjct: 160 ALKRLGLASNRLDPEGAALVAKALERNTYLSSLDLSVNELGPSGAECLAGILRTSVSVLQ 219

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L L GN +G  GV  +CD +  N  ++RL L +    DE A  IA +L+ N  L  L++
Sbjct: 220 VLQLHGNYLGPTGVIAICDAVKTNRELKRLTLGNNHATDEAAGGIAAMLEANETLEELDI 279

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N +  +G  ++A+                           +GL  N SL  L L GN 
Sbjct: 280 RLNTLTANGVRTIAQ---------------------------QGLAKNTSLAVLSLSGNE 312

Query: 342 IGDEGIRALMSGLSS-RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           +G  G   L   L+S ++  L  LD+ +  ++A G F VA  +    SL  INL  N + 
Sbjct: 313 VGPVGANELTQVLTSHQRSVLEKLDLSSCGLTASGGFRVASLLSTSISLKEINLSDNALD 372

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           DE A ++A  +    TI+ +D+  NNI  +GAS +      N+ + +L    N I     
Sbjct: 373 DEAAARLAQNIMDGITISVVDVSCNNIGEEGASQLIDAALRNARLVALMTNGNSISRVAQ 432

Query: 461 KALSEVLK 468
           K L  +L+
Sbjct: 433 KRLDNLLE 440



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 163/354 (46%), Gaps = 12/354 (3%)

Query: 150 SKQTLNEFAKEL------RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT 203
           SKQ L+   + L          ++D      G  G   +A  L  +    EV    N I 
Sbjct: 58  SKQQLDSICRALMDRESDTPIHTIDFMDNQLGPTGAAKIASCL-ESSPVTEVFICYNDIG 116

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
             G     GV+  + +L+ L++ GN +    V+ L   +  +  ++RL L+S  L  EGA
Sbjct: 117 KEGCDGLAGVVNVSHSLQVLDIRGNHLSASDVQRLLRSVSMSTALKRLGLASNRLDPEGA 176

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANAL 322
             +A+ L+ N+ L  L+L+ N +  SG   LA  L  + S ++ L L+GNY G  G  A+
Sbjct: 177 ALVAKALERNTYLSSLDLSVNELGPSGAECLAGILRTSVSVLQVLQLHGNYLGPTGVIAI 236

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
              ++ N+ L+ L L  N   DE    + + L + +  L  LDI  N+++A G   +A+ 
Sbjct: 237 CDAVKTNRELKRLTLGNNHATDEAAGGIAAMLEANE-TLEELDIRLNTLTANGVRTIAQQ 295

Query: 383 -IKNCKSLLWINLYMNDIGDEGAEKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVL 439
            +    SL  ++L  N++G  GA ++   L   Q   +  +DL    + + G   +A +L
Sbjct: 296 GLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLEKLDLSSCGLTASGGFRVASLL 355

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
             +  +  ++L+ N +  + A  L++ +     I+ + +    IG  GA  + D
Sbjct: 356 STSISLKEINLSDNALDDEAAARLAQNIMDGITISVVDVSCNNIGEEGASQLID 409



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 3/202 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-DGVLQSNIAL 220
           R    + +   +  DE    +A  L  N+T EE+    N +TA G++      L  N +L
Sbjct: 244 RELKRLTLGNNHATDEAAGGIAAMLEANETLEELDIRLNTLTANGVRTIAQQGLAKNTSL 303

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             L+LSGN +G  G   L  +L  +  + +E+L LSS  L   G   +A LL  +  L+ 
Sbjct: 304 AVLSLSGNEVGPVGANELTQVLTSHQRSVLEKLDLSSCGLTASGGFRVASLLSTSISLKE 363

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           + L++N +D      LA+ +++  TI  + ++ N  G  GA+ L      N  L  L  +
Sbjct: 364 INLSDNALDDEAAARLAQNIMDGITISVVDVSCNNIGEEGASQLIDAALRNARLVALMTN 423

Query: 339 GNSIGDEGIRALMSGLSSRKGK 360
           GNSI     + L + L  R+ K
Sbjct: 424 GNSISRVAQKRLDNLLEERQAK 445


>gi|242062330|ref|XP_002452454.1| hypothetical protein SORBIDRAFT_04g026090 [Sorghum bicolor]
 gi|241932285|gb|EES05430.1| hypothetical protein SORBIDRAFT_04g026090 [Sorghum bicolor]
          Length = 543

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 137/275 (49%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S  +L+ L +  + I +E  K L +++     ++ L   
Sbjct: 219 LNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA  IAE++K +  +     +   I   G  +L+EAL   + ++ L L  N  
Sbjct: 279 NNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L     L EL+L   ++ +EG  +++  L     +L VL++  N I+AK
Sbjct: 339 GVDAGLALSKTLSKLHDLVELYLSDLNLENEGTISIVKALKQSAPQLEVLEMAGNEINAK 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
            A  +AE +   +SL  + L  N++ D+GA  IA +L+   T +  +D+  N +   GA 
Sbjct: 399 AALDLAECLTAMQSLKKLTLAENELKDDGAVIIAKSLEDGHTDLKELDVSTNMLQRVGAR 458

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             AR + D      L++  N I  +G   + E+LK
Sbjct: 459 CFARAVADKPAFVQLNINGNFISDEGIDEVKEILK 493



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 33/282 (11%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +K LEG+  LR L++  N++G++G+RA    L S++  L  L + N+ IS + A  ++E
Sbjct: 207 FSKALEGS-VLRYLNISDNALGEKGVRAFSELLKSQES-LEELYVMNDGISEEAAKALSE 264

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I   + L  ++ + N  GDEGA  IA+ +K++  + +       I S G  A++  L  
Sbjct: 265 LIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGT 324

Query: 442 NSVITSLDLAYNPIGADGAKALSEVL-KFHG----------------------------N 472
            + +  LDL  N  G D   ALS+ L K H                              
Sbjct: 325 CTRLKKLDLRDNLFGVDAGLALSKTLSKLHDLVELYLSDLNLENEGTISIVKALKQSAPQ 384

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           +  L++   +I A  A  +A+ L    ++  L L  N L+D+GA  +A+S +  +  L  
Sbjct: 385 LEVLEMAGNEINAKAALDLAECLTAMQSLKKLTLAENELKDDGAVIIAKSLEDGHTDLKE 444

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           +D++ N ++  GA   A+A+   +  A   LN+  NF++  G
Sbjct: 445 LDVSTNMLQRVGARCFARAVA--DKPAFVQLNINGNFISDEG 484



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 135/303 (44%), Gaps = 31/303 (10%)

Query: 144 GKLFRESKQTLNEFAKELR--AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           G+   E+   +  F+K L       +++S    G++G+   +E L   ++ EE+    +G
Sbjct: 194 GRPEDEALDVMRIFSKALEGSVLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDG 253

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I+    KA   ++ +   LK L+   N  GDEG   + +++  +  VE  + S+  +  +
Sbjct: 254 ISEEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSD 313

Query: 262 GAKAIAELLKNNSILRVLELNNNM----------------------------IDYSGFTS 293
           G  A++E L   + L+ L+L +N+                            ++  G  S
Sbjct: 314 GGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSKTLSKLHDLVELYLSDLNLENEGTIS 373

Query: 294 LAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           + +AL +++  +  L + GN   A  A  LA+ L   +SL++L L  N + D+G   +  
Sbjct: 374 IVKALKQSAPQLEVLEMAGNEINAKAALDLAECLTAMQSLKKLTLAENELKDDGAVIIAK 433

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  LD+  N +   GA   A  + +  + + +N+  N I DEG +++ + LK
Sbjct: 434 SLEDGHTDLKELDVSTNMLQRVGARCFARAVADKPAFVQLNINGNFISDEGIDEVKEILK 493

Query: 413 QNR 415
             +
Sbjct: 494 AGK 496



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 101/247 (40%), Gaps = 30/247 (12%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
            E+ + L+E          +       GDEG  ++AE +  +   E    +A  I + G 
Sbjct: 256 EEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGG 315

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
            A    L +   LK L+L  N  G +    L   L     +  L LS ++L +EG  +I 
Sbjct: 316 VALSEALGTCTRLKKLDLRDNLFGVDAGLALSKTLSKLHDLVELYLSDLNLENEGTISIV 375

Query: 268 ELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           + LK ++  L VLE+  N I+      LAE L    +++ L L  N     GA  +AK L
Sbjct: 376 KALKQSAPQLEVLEMAGNEINAKAALDLAECLTAMQSLKKLTLAENELKDDGAVIIAKSL 435

Query: 327 E-GNKSLREL----------------------------HLHGNSIGDEGIRALMSGLSSR 357
           E G+  L+EL                            +++GN I DEGI  +   L + 
Sbjct: 436 EDGHTDLKELDVSTNMLQRVGARCFARAVADKPAFVQLNINGNFISDEGIDEVKEILKAG 495

Query: 358 KGKLAVL 364
           K  L VL
Sbjct: 496 KKSLDVL 502


>gi|229595531|ref|XP_001016935.3| hypothetical protein TTHERM_01535640 [Tetrahymena thermophila]
 gi|225565936|gb|EAR96690.3| hypothetical protein TTHERM_01535640 [Tetrahymena thermophila
           SB210]
          Length = 710

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 192/409 (46%), Gaps = 37/409 (9%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER--LQLSSVDLRDEGAKAIAELLKNN 273
           +N++  TLNLS N IGD+G+  L   L +   +    LQL    + D+G   +   L N 
Sbjct: 234 TNLSKLTLNLSDNQIGDQGISGLGFALANCTNLSNLTLQLYVNQIGDQGISGLGFALANC 293

Query: 274 SILR--VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA-KGLEG-- 328
           + L    L L  + I   G + L +AL   + I  L LN      LG N +  +G+ G  
Sbjct: 294 TNLSNLTLYLYPSQIGDQGASGLGQALANCTNISKLTLN------LGDNQIGDQGISGLG 347

Query: 329 -------NKSLRELHLHGNSIGDEGIRALMSGLSSRKG-KLAVLDIGNNSISAKGAFHVA 380
                  N S   L+L+GN IGD+G   L   L++        L++G N I  +GA  + 
Sbjct: 348 FALANCTNLSNLTLYLYGNQIGDQGASGLGQALANCTNISNLTLNLGRNQIDDQGALGLG 407

Query: 381 EYIKNCKSLLWINLYM--NDIGDEGAEKIADALKQ--NRTITTIDLGGNNIHSKGASAIA 436
             + +C +L  + L +  N IGDEGA  +   L    N +  T+ L GN I  +GAS + 
Sbjct: 408 SALADCTNLQNLTLILDGNQIGDEGASGLGSVLANCANLSNLTLYLSGNQIGDEGASGLG 467

Query: 437 RVLKDNSVITSLD--LAYNPIGADGAKALSEVLKFHGNIN--TLKLGWCQIGASGAEFVA 492
            VL + + +++L   L+ N IG  GA  L   L  + +++  TL L + QIG  GA  + 
Sbjct: 468 SVLANCANLSNLTLYLSQNQIGVIGAIGLGSALANYIHLSNLTLNLSYNQIGDQGASGLG 527

Query: 493 DMLRYNNTIS--ILDLRANGLRDEGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGAFAIA 549
             L   N +S  ILDL  N +  +GA  L        N +  ++ L  N+I D GA  + 
Sbjct: 528 SALANCNNLSNLILDLCDNQISGQGASGLGSGLVNCTNLSNLTLHLNRNQIDDQGALGLG 587

Query: 550 QALKANEDVAVTSLNLANNFL-----TKFGQSALTDAKDLVYEMSEKEV 593
            AL    +++   L L+ N +     + FG ++ T+  +L  ++   ++
Sbjct: 588 SALANCTNLSNLKLCLSANQIRDLGASSFGLASCTNISNLALDLRYNQI 636



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 178/399 (44%), Gaps = 36/399 (9%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS--SVDLRDEGAKAIAELLKNN 273
           +NI+  TLNL  N IGD+G+  L   L +   +  L L      + D+GA  + + L N 
Sbjct: 324 TNISKLTLNLGDNQIGDQGISGLGFALANCTNLSNLTLYLYGNQIGDQGASGLGQALANC 383

Query: 274 SILRVLELN--NNMIDYSGFTSLAEALLENSTIRSLHL--NGNYGGALGANALAKGLE-- 327
           + +  L LN   N ID  G   L  AL + + +++L L  +GN  G  GA+ L   L   
Sbjct: 384 TNISNLTLNLGRNQIDDQGALGLGSALADCTNLQNLTLILDGNQIGDEGASGLGSVLANC 443

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA-----VLDIGNNSISAKGAFHVAEY 382
            N S   L+L GN IGDEG     SGL S     A      L +  N I   GA  +   
Sbjct: 444 ANLSNLTLYLSGNQIGDEG----ASGLGSVLANCANLSNLTLYLSQNQIGVIGAIGLGSA 499

Query: 383 IKNCKSL--LWINLYMNDIGDEGAEKIADALKQNRTITTI--DLGGNNIHSKGASAIARV 438
           + N   L  L +NL  N IGD+GA  +  AL     ++ +  DL  N I  +GAS +   
Sbjct: 500 LANYIHLSNLTLNLSYNQIGDQGASGLGSALANCNNLSNLILDLCDNQISGQGASGLGSG 559

Query: 439 LKDNSVITSLDLAYN--PIGADGAKALSEVLKFHGNINTLKLGWC--QIGASGAEFVADM 494
           L + + +++L L  N   I   GA  L   L    N++ LKL     QI   GA      
Sbjct: 560 LVNCTNLSNLTLHLNRNQIDDQGALGLGSALANCTNLSNLKLCLSANQIRDLGASSFGLA 619

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALT-SIDLAFNEIRDDGAFAIAQALK 553
              N +   LDLR N + ++GA  L  +          S+DL+ N+I D GA  +  AL 
Sbjct: 620 SCTNISNLALDLRYNQIHEQGALGLGSALANCTHLQNLSLDLSGNQIDDQGALGLGSALA 679

Query: 554 ANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKE 592
              ++   +L+L          S LTD ++  +  +  E
Sbjct: 680 NCINLLNLTLHL----------SCLTDKQEFFFVKASGE 708



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 148/486 (30%), Positives = 210/486 (43%), Gaps = 52/486 (10%)

Query: 147 FRESKQTLNE--FAKELRAFSSVDMSGRNFGDEGLFFLAESLG--YNQTAEEVSFAANGI 202
           F  S Q  N+  F + L+       S    GDEG   L  +L    N +   +    N I
Sbjct: 47  FFPSNQLFNDIFFLQYLK-------SNNQIGDEGASGLGSALANCINLSNLTLQLYENQI 99

Query: 203 TAAGIKAFDGVLQSNIALK--TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR- 259
              G       L + I L   TLNLS N IGDEG   L   L +   +  L L   +LR 
Sbjct: 100 GDEGASDLGSALANCINLSNLTLNLSYNQIGDEGASGLGSALANCINLSNLTL---NLRY 156

Query: 260 ----DEGAKAIAELLKNNSILRVLELN--NNMIDYSGFTSLAEALLENSTIRSLHLN-GN 312
               DEGA  +   L N   L  L LN  +  I   G + L  AL     + +L L+  N
Sbjct: 157 NQIGDEGASGLGSALANCINLSNLTLNLRDKKIGDEGASGLGSALANCINLSNLTLDLRN 216

Query: 313 YGGALGANALAKGLEGNKSLRE--LHLHGNSIGDEGIRAL------MSGLSSRKGKLAVL 364
                G + L   L    +L +  L+L  N IGD+GI  L       + LS+   +L V 
Sbjct: 217 QIDDQGTSELGSALANCTNLSKLTLNLSDNQIGDQGISGLGFALANCTNLSNLTLQLYVN 276

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSL--LWINLYMNDIGDEGAEKIADALKQNRTIT--TI 420
            IG+  IS  G F +A    NC +L  L + LY + IGD+GA  +  AL     I+  T+
Sbjct: 277 QIGDQGISGLG-FALA----NCTNLSNLTLYLYPSQIGDQGASGLGQALANCTNISKLTL 331

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAY--NPIGADGAKALSEVLKFHGNIN--TL 476
           +LG N I  +G S +   L + + +++L L    N IG  GA  L + L    NI+  TL
Sbjct: 332 NLGDNQIGDQGISGLGFALANCTNLSNLTLYLYGNQIGDQGASGLGQALANCTNISNLTL 391

Query: 477 KLGWCQIGASGA----EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF-KVVNEALT 531
            LG  QI   GA      +AD     N   ILD   N + DEGA  L        N +  
Sbjct: 392 NLGRNQIDDQGALGLGSALADCTNLQNLTLILD--GNQIGDEGASGLGSVLANCANLSNL 449

Query: 532 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEK 591
           ++ L+ N+I D+GA  +   L    +++  +L L+ N +   G   L  A      +S  
Sbjct: 450 TLYLSGNQIGDEGASGLGSVLANCANLSNLTLYLSQNQIGVIGAIGLGSALANYIHLSNL 509

Query: 592 EVNIFF 597
            +N+ +
Sbjct: 510 TLNLSY 515



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 136/317 (42%), Gaps = 19/317 (5%)

Query: 169 MSGRNFGDEGLFFLAESLG--YNQTAEEVSFAANGITAAGIKAFDGVLQ--SNIALKTLN 224
           + G   GD+G   L ++L    N +   ++   N I   G       L   +N+   TL 
Sbjct: 363 LYGNQIGDQGASGLGQALANCTNISNLTLNLGRNQIDDQGALGLGSALADCTNLQNLTLI 422

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQL--SSVDLRDEGAKAIAELLKNNSILR--VLE 280
           L GN IGDEG   L  +L + A +  L L  S   + DEGA  +  +L N + L    L 
Sbjct: 423 LDGNQIGDEGASGLGSVLANCANLSNLTLYLSGNQIGDEGASGLGSVLANCANLSNLTLY 482

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG--GALGANALAKGLEGNKSLREL--H 336
           L+ N I   G   L  AL     + +L LN +Y   G  GA+ L   L    +L  L   
Sbjct: 483 LSQNQIGVIGAIGLGSALANYIHLSNLTLNLSYNQIGDQGASGLGSALANCNNLSNLILD 542

Query: 337 LHGNSIGDEGIRALMSGL--SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LWI 392
           L  N I  +G   L SGL   +    L  L +  N I  +GA  +   + NC +L  L +
Sbjct: 543 LCDNQISGQGASGLGSGLVNCTNLSNL-TLHLNRNQIDDQGALGLGSALANCTNLSNLKL 601

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT--SLDL 450
            L  N I D GA     A   N +   +DL  N IH +GA  +   L + + +   SLDL
Sbjct: 602 CLSANQIRDLGASSFGLASCTNISNLALDLRYNQIHEQGALGLGSALANCTHLQNLSLDL 661

Query: 451 AYNPIGADGAKALSEVL 467
           + N I   GA  L   L
Sbjct: 662 SGNQIDDQGALGLGSAL 678



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 107/245 (43%), Gaps = 11/245 (4%)

Query: 169 MSGRNFGDEGLFFLAESLG--YNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK--TLN 224
           +SG   GDEG   L   L    N +   +  + N I   G       L + I L   TLN
Sbjct: 453 LSGNQIGDEGASGLGSVLANCANLSNLTLYLSQNQIGVIGAIGLGSALANYIHLSNLTLN 512

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD--LRDEGAKAIAELLKNNSILR--VLE 280
           LS N IGD+G   L   L +   +  L L   D  +  +GA  +   L N + L    L 
Sbjct: 513 LSYNQIGDQGASGLGSALANCNNLSNLILDLCDNQISGQGASGLGSGLVNCTNLSNLTLH 572

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHL--NGNYGGALGANALAKGLEGNKSLRELHLH 338
           LN N ID  G   L  AL   + + +L L  + N    LGA++       N S   L L 
Sbjct: 573 LNRNQIDDQGALGLGSALANCTNLSNLKLCLSANQIRDLGASSFGLASCTNISNLALDLR 632

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            N I ++G   L S L++      + LD+  N I  +GA  +   + NC +LL + L+++
Sbjct: 633 YNQIHEQGALGLGSALANCTHLQNLSLDLSGNQIDDQGALGLGSALANCINLLNLTLHLS 692

Query: 398 DIGDE 402
            + D+
Sbjct: 693 CLTDK 697


>gi|443728681|gb|ELU14920.1| hypothetical protein CAPTEDRAFT_163530 [Capitella teleta]
          Length = 635

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 133/259 (51%), Gaps = 2/259 (0%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L++ ++ +   G   +A AL+ N+ +  L L  N+ G  G   L + L+ N  + EL L 
Sbjct: 238 LKMKHHGLGPKGVKPIAVALVSNTCVLRLSLTDNWLGNEGGRHLCEMLKENCYITELDLS 297

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G        S L++    L  + +  N +  K A ++A+ I N   L ++NL  N 
Sbjct: 298 DNQLGVSFAENFTSVLNN-NSTLTHVTLTGNFLDDKAAIYLADAIMNTTRLEYLNLSRNK 356

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G+     +  A+ +N +I  +DL  N++  KGA A+A+ +K N ++ S++L++N +G D
Sbjct: 357 LGEVAGVALGPAIAENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQSVNLSWNGVGND 416

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GAKAL + LK +  +  L +   +I   G+ F+   +  N ++ +L +  N ++  G   
Sbjct: 417 GAKALGDALKVNSALEELDITNNRITTEGSVFLGKGIAVNESLKVLKMARNPMQSAGCYA 476

Query: 519 L-AQSFKVVNEALTSIDLA 536
           + A   K  N  +TSID +
Sbjct: 477 ICAAMLKNPNSIITSIDFS 495



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 125/253 (49%), Gaps = 2/253 (0%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G   +A  L  N  +  L L  N +G+EG R L   L      +  LD+ +N +   
Sbjct: 246 GPKGVKPIAVALVSNTCVLRLSLTDNWLGNEGGRHLCEMLK-ENCYITELDLSDNQLGVS 304

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A +    + N  +L  + L  N + D+ A  +ADA+     +  ++L  N +      A
Sbjct: 305 FAENFTSVLNNNSTLTHVTLTGNFLDDKAAIYLADAIMNTTRLEYLNLSRNKLGEVAGVA 364

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +   + +NS I  LDL++N +   GA A+++ +K +  + ++ L W  +G  GA+ + D 
Sbjct: 365 LGPAIAENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQSVNLSWNGVGNDGAKALGDA 424

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L+ N+ +  LD+  N +  EG+  L +    VNE+L  + +A N ++  G +AI  A+  
Sbjct: 425 LKVNSALEELDITNNRITTEGSVFLGKGI-AVNESLKVLKMARNPMQSAGCYAICAAMLK 483

Query: 555 NEDVAVTSLNLAN 567
           N +  +TS++ ++
Sbjct: 484 NPNSIITSIDFSD 496



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 129/274 (47%), Gaps = 31/274 (11%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L +  + +G +GVK +   LV N  V RL L+   L +EG + + E+LK N  +  L+L+
Sbjct: 238 LKMKHHGLGPKGVKPIAVALVSNTCVLRLSLTDNWLGNEGGRHLCEMLKENCYITELDLS 297

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N +  S   +    L  NST+  + L GN+     A  LA  +     L  L+L  N +
Sbjct: 298 DNQLGVSFAENFTSVLNNNSTLTHVTLTGNFLDDKAAIYLADAIMNTTRLEYLNLSRNKL 357

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           G+    AL   ++     +  LD+  N +  KGA  VA+ IK+   +  +NL  N +G++
Sbjct: 358 GEVAGVALGPAIA-ENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQSVNLSWNGVGND 416

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGA----SAIA-----RVLK------------- 440
           GA+ + DALK N  +  +D+  N I ++G+      IA     +VLK             
Sbjct: 417 GAKALGDALKVNSALEELDITNNRITTEGSVFLGKGIAVNESLKVLKMARNPMQSAGCYA 476

Query: 441 --------DNSVITSLDLAYNPIGADGAKALSEV 466
                    NS+ITS+D +   + +D    L +V
Sbjct: 477 ICAAMLKNPNSIITSIDFSDILVNSDFGDILKKV 510



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 31/253 (12%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           +G+   G+K     L SN  +  L+L+ N +G+EG + LC++L +N  +  L LS   L 
Sbjct: 243 HGLGPKGVKPIAVALVSNTCVLRLSLTDNWLGNEGGRHLCEMLKENCYITELDLSDNQLG 302

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-------------------- 299
              A+    +L NNS L  + L  N +D      LA+A++                    
Sbjct: 303 VSFAENFTSVLNNNSTLTHVTLTGNFLDDKAAIYLADAIMNTTRLEYLNLSRNKLGEVAG 362

Query: 300 --------ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
                   ENS+I+ L L+ N+    GA A+A+G++ N  ++ ++L  N +G++G +AL 
Sbjct: 363 VALGPAIAENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQSVNLSWNGVGNDGAKALG 422

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
             L      L  LDI NN I+ +G+  + + I   +SL  + +  N +   G   I  A+
Sbjct: 423 DALKVNSA-LEELDITNNRITTEGSVFLGKGIAVNESLKVLKMARNPMQSAGCYAICAAM 481

Query: 412 --KQNRTITTIDL 422
               N  IT+ID 
Sbjct: 482 LKNPNSIITSIDF 494



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 3/190 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + +  + +G +G + IA AL  N  +  + L  N + ++G   +  +LK+N  IT LDL+
Sbjct: 238 LKMKHHGLGPKGVKPIAVALVSNTCVLRLSLTDNWLGNEGGRHLCEMLKENCYITELDLS 297

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +G   A+  + VL  +  +  + L    +    A ++AD +     +  L+L  N L
Sbjct: 298 DNQLGVSFAENFTSVLNNNSTLTHVTLTGNFLDDKAAIYLADAIMNTTRLEYLNLSRNKL 357

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            +     L  +    N ++  +DL++N +R  GA A+AQ +K N  V + S+NL+ N + 
Sbjct: 358 GEVAGVALGPAI-AENSSIKHLDLSWNHLRRKGAIAVAQGIKHN--VLMQSVNLSWNGVG 414

Query: 572 KFGQSALTDA 581
             G  AL DA
Sbjct: 415 NDGAKALGDA 424



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 2/210 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT-A 204
           L  E  + L E  KE    + +D+S    G          L  N T   V+   N +   
Sbjct: 273 LGNEGGRHLCEMLKENCYITELDLSDNQLGVSFAENFTSVLNNNSTLTHVTLTGNFLDDK 332

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           A I   D ++ +   L+ LNLS N +G+     L   + +N+ ++ L LS   LR +GA 
Sbjct: 333 AAIYLADAIMNTT-RLEYLNLSRNKLGEVAGVALGPAIAENSSIKHLDLSWNHLRRKGAI 391

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A+ +K+N +++ + L+ N +   G  +L +AL  NS +  L +  N     G+  L K
Sbjct: 392 AVAQGIKHNVLMQSVNLSWNGVGNDGAKALGDALKVNSALEELDITNNRITTEGSVFLGK 451

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           G+  N+SL+ L +  N +   G  A+ + +
Sbjct: 452 GIAVNESLKVLKMARNPMQSAGCYAICAAM 481



 Score = 45.4 bits (106), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E  +   +D+S  +   +G   +A+ + +N   + V+ + NG+   G KA    L+ N A
Sbjct: 371 ENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQSVNLSWNGVGNDGAKALGDALKVNSA 430

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI-AELLKN-NSILR 277
           L+ L+++ N I  EG   L   +  N  ++ L+++   ++  G  AI A +LKN NSI+ 
Sbjct: 431 LEELDITNNRITTEGSVFLGKGIAVNESLKVLKMARNPMQSAGCYAICAAMLKNPNSIIT 490

Query: 278 VLELNNNMID 287
            ++ ++ +++
Sbjct: 491 SIDFSDILVN 500


>gi|343962255|dbj|BAK62715.1| hypothetical protein [Pan troglodytes]
          Length = 471

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    N S+I SL L+GN      A  L + L  N  +++L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 266 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 NMDGA 330



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 134/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 151

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  ++ A  +  AL  N  I  +DL  N
Sbjct: 152 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 212 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
             A  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 272 EVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLES-NESLRVLKLFLNPINMDGA 330

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  A+K N    +  L+++N  +++
Sbjct: 331 ILLILAIKRNPKSRMEELDISNVLVSE 357



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 30/264 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 104 GTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 163

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 164 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFS-------- 214

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 215 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 254

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 255 GNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNES 314

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           + +L L  N +  +GA  L  + K
Sbjct: 315 LRVLKLFLNPINMDGAILLILAIK 338



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 129/252 (51%), Gaps = 7/252 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +  +   + +E  +S   L+ HG  +G  G +A+   L S    +  L++ +N I  +
Sbjct: 77  GVVPVSYFIRNME--ESYVNLNHHG--LGPRGTKAIAIALVSNPA-VTKLELEDNCIMEE 131

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
           G   + E ++    L  +N+  N +G EGA  I+D  ++N + I +++L GN+     A+
Sbjct: 132 GVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAA 191

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            + + L  N  I  LDL++N     G + L ++L  +  + +L L W      GA  + +
Sbjct: 192 LLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCN 251

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            LR N T++ LDL  NG  +E A  L +  + +N  L  +D+  N+I ++GA  I++ L+
Sbjct: 252 GLRGNVTLTKLDLSMNGFGNEVALALGEVLR-LNSCLVYLDIGGNDIGNEGASKISKGLE 310

Query: 554 ANEDVAVTSLNL 565
           +NE + V  L L
Sbjct: 311 SNESLRVLKLFL 322



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 265

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N    + A  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 266 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 326 NMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 376



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 91  SYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 151 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 211 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 271 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 329

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 330 AILLILAIKRN 340



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 128 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 187

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 188 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 247

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 248 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 307

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 308 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 358


>gi|410048542|ref|XP_003952592.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Pan troglodytes]
          Length = 471

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    N S+I SL L+GN      A  L + L  N  +++L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 266 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 NMDGA 330



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 134/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 151

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  ++ A  +  AL  N  I  +DL  N
Sbjct: 152 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 212 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
             A  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 272 EVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLES-NESLRVLKLFLNPINMDGA 330

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  A+K N    +  L+++N  +++
Sbjct: 331 ILLILAIKRNPKSRMEELDISNVLVSE 357



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 30/264 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 104 GTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 163

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 164 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFS-------- 214

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 215 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 254

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 255 GNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNES 314

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           + +L L  N +  +GA  L  + K
Sbjct: 315 LRVLKLFLNPINMDGAILLILAIK 338



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 129/252 (51%), Gaps = 7/252 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +  +   + +E  +S   L+ HG  +G  G +A+   L S    +  L++ +N I  +
Sbjct: 77  GVVPVSYFIRNME--ESYVNLNHHG--LGPRGTKAIAIALVSNPA-VTKLELEDNCIMEE 131

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
           G   + E ++    L  +N+  N +G EGA  I+D  ++N + I +++L GN+     A+
Sbjct: 132 GVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAA 191

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            + + L  N  I  LDL++N     G + L ++L  +  + +L L W      GA  + +
Sbjct: 192 LLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCN 251

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            LR N T++ LDL  NG  +E A  L +  + +N  L  +D+  N+I ++GA  I++ L+
Sbjct: 252 GLRGNVTLTKLDLSMNGFGNEVALALGEVLR-LNSCLVYLDIGGNDIGNEGASKISKGLE 310

Query: 554 ANEDVAVTSLNL 565
           +NE + V  L L
Sbjct: 311 SNESLRVLKLFL 322



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      L  LD+ 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLTKLDLS 265

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N    + A  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 266 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 326 NMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 376



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N    ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 91  SYVNLNHHGLGPRGTKAIAIALVSNPAVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 151 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 211 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 271 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 329

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 330 AILLILAIKRN 340



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 128 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 187

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 188 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 247

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 248 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 307

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 308 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 358


>gi|255084115|ref|XP_002508632.1| flagellar autotomy protein [Micromonas sp. RCC299]
 gi|226523909|gb|ACO69890.1| flagellar autotomy protein [Micromonas sp. RCC299]
          Length = 1414

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 151/324 (46%), Gaps = 32/324 (9%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
            L+ L L    +G +G   L +IL D   AG+ERL L    L  EG +A+   L     L+
Sbjct: 1070 LRFLALGETALGPKGGIALAEILRDGSCAGLERLSLPGAGLGAEGVEAVCAALPPK--LQ 1127

Query: 278  VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             L++ +N     G  ++ EAL   + ++ + L  N    +GA ALA  +  + SL ELH+
Sbjct: 1128 ALDVGSNGCGDQGAKAVGEALKRCANMKRIGLAANELSEVGARALAPFIRDHASLEELHV 1187

Query: 338  HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             GN +GD G  AL   + S    +  L +  N     GA         CKSL        
Sbjct: 1188 TGNRVGDRGCSALAMAVRSTNAPIVKLALNENFNITAGA---------CKSL-------- 1230

Query: 398  DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
                      A  +  +RT+  +DL    I ++GA A+A  L ++  +  L+L    + A
Sbjct: 1231 ----------AQCIASSRTLQELDLSKVMIGAEGAKALAAGLSESPALRVLELGSCKLRA 1280

Query: 458  DGAKALSEVLKFHGNINTLKLGWCQIGASGA-EFVADMLRYNNTISILDLRANGLRDEGA 516
            DGAK + E L  + ++  L L    +G  G  E VA  L+ + ++  LDLR N +  EGA
Sbjct: 1281 DGAKFIGEALVRNLSLERLGLSRNSLGDKGVFELVAAGLQGSRSLRDLDLRHNSIGPEGA 1340

Query: 517  KCLAQSFKVVNEALTSIDLAFNEI 540
            K L    +  N  L +++LA N++
Sbjct: 1341 KRLGAMLERKNFVLKNLELAGNKL 1364



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 157/320 (49%), Gaps = 9/320 (2%)

Query: 265  AIAELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENST--IRSLHLNGNYGGALGANA 321
            A+ +L K + + LR L L    +   G  +LAE L + S   +  L L G   GA G  A
Sbjct: 1058 AVTKLAKGDVATLRFLALGETALGPKGGIALAEILRDGSCAGLERLSLPGAGLGAEGVEA 1117

Query: 322  LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +   L     L+ L +  N  GD+G +A+   L  R   +  + +  N +S  GA  +A 
Sbjct: 1118 VCAALP--PKLQALDVGSNGCGDQGAKAVGEALK-RCANMKRIGLAANELSEVGARALAP 1174

Query: 382  YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGN-NIHSKGASAIARVL 439
            +I++  SL  +++  N +GD G   +A A++  N  I  + L  N NI +    ++A+ +
Sbjct: 1175 FIRDHASLEELHVTGNRVGDRGCSALAMAVRSTNAPIVKLALNENFNITAGACKSLAQCI 1234

Query: 440  KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
              +  +  LDL+   IGA+GAKAL+  L     +  L+LG C++ A GA+F+ + L  N 
Sbjct: 1235 ASSRTLQELDLSKVMIGAEGAKALAAGLSESPALRVLELGSCKLRADGAKFIGEALVRNL 1294

Query: 500  TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
            ++  L L  N L D+G   L  +    + +L  +DL  N I  +GA  +   L+  ++  
Sbjct: 1295 SLERLGLSRNSLGDKGVFELVAAGLQGSRSLRDLDLRHNSIGPEGAKRLGAMLE-RKNFV 1353

Query: 560  VTSLNLANNFLTKFGQSALT 579
            + +L LA N L    +S L 
Sbjct: 1354 LKNLELAGNKLDASTESKLV 1373



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 134/274 (48%), Gaps = 15/274 (5%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
               + + G   G EG+  +  +L     A +V   +NG    G KA    L+    +K +
Sbjct: 1100 LERLSLPGAGLGAEGVEAVCAALPPKLQALDV--GSNGCGDQGAKAVGEALKRCANMKRI 1157

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN-NSILRVLELN 282
             L+ N + + G + L   + D+A +E L ++   + D G  A+A  +++ N+ +  L LN
Sbjct: 1158 GLAANELSEVGARALAPFIRDHASLEELHVTGNRVGDRGCSALAMAVRSTNAPIVKLALN 1217

Query: 283  NNM-IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N  I      SLA+ +  + T++ L L+    GA GA ALA GL  + +LR L L    
Sbjct: 1218 ENFNITAGACKSLAQCIASSRTLQELDLSKVMIGAEGAKALAAGLSESPALRVLELGSCK 1277

Query: 342  IGDEGIR----ALMSGLSSRKGKLAVLDIGNNSISAKGAFH-VAEYIKNCKSLLWINLYM 396
            +  +G +    AL+  LS     L  L +  NS+  KG F  VA  ++  +SL  ++L  
Sbjct: 1278 LRADGAKFIGEALVRNLS-----LERLGLSRNSLGDKGVFELVAAGLQGSRSLRDLDLRH 1332

Query: 397  NDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHS 429
            N IG EGA+++   L ++N  +  ++L GN + +
Sbjct: 1333 NSIGPEGAKRLGAMLERKNFVLKNLELAGNKLDA 1366



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 20/151 (13%)

Query: 439  LKDNSVITSLDLAYNPIGADGAKALS-EVLKF-HGNINTLK---LGWCQIGASGAEFVAD 493
            +K+ +   SLD+A  P G  G   LS  V K   G++ TL+   LG   +G  G   +A+
Sbjct: 1031 VKEGASPYSLDIAGTPCGVPGLVTLSGAVTKLAKGDVATLRFLALGETALGPKGGIALAE 1090

Query: 494  MLRYNNTISI--LDLRANGLRDEG--AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
            +LR  +   +  L L   GL  EG  A C A   K     L ++D+  N   D GA A+ 
Sbjct: 1091 ILRDGSCAGLERLSLPGAGLGAEGVEAVCAALPPK-----LQALDVGSNGCGDQGAKAVG 1145

Query: 550  QALK--ANEDVAVTSLNLANNFLTKFGQSAL 578
            +ALK  AN    +  + LA N L++ G  AL
Sbjct: 1146 EALKRCAN----MKRIGLAANELSEVGARAL 1172



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 12/140 (8%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            R    +D+S    G EG   LA  L  +     +   +  + A G K     L  N++L+
Sbjct: 1238 RTLQELDLSKVMIGAEGAKALAAGLSESPALRVLELGSCKLRADGAKFIGEALVRNLSLE 1297

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVE-RLQLSSVDLR-----DEGAKAIAELL-KNNS 274
             L LS N +GD+GV  L       AG++    L  +DLR      EGAK +  +L + N 
Sbjct: 1298 RLGLSRNSLGDKGVFELV-----AAGLQGSRSLRDLDLRHNSIGPEGAKRLGAMLERKNF 1352

Query: 275  ILRVLELNNNMIDYSGFTSL 294
            +L+ LEL  N +D S  + L
Sbjct: 1353 VLKNLELAGNKLDASTESKL 1372


>gi|156370327|ref|XP_001628422.1| predicted protein [Nematostella vectensis]
 gi|156215398|gb|EDO36359.1| predicted protein [Nematostella vectensis]
          Length = 496

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 141/299 (47%), Gaps = 30/299 (10%)

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  +++ ALL N+TI  L++  N  G  G   +AK L  N  + EL              
Sbjct: 114 GVQAISLALLYNTTITVLNIRDNGIGEEGGEIIAKLLRENYYITEL-------------- 159

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
                          DI  N + A+G   +AE +K   +L  + +  ND+ D+ A  +  
Sbjct: 160 ---------------DISENQVGARGTLEIAETLKMNNTLTKLGMAGNDLSDKEAALLCS 204

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           AL  N T+T IDL GN   +K    I  +L ++  +  LDL++N I   GA+ +++ L+ 
Sbjct: 205 ALLVNSTVTRIDLSGNKFSNKACEYIGALLDESYSLEYLDLSWNHIQVKGAQRIAKGLEG 264

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +  + TLKL W  +   GA  +A  L  N T+  LDL +N + DEGA   A++ K  N +
Sbjct: 265 NMKLKTLKLAWNGVATDGAIALAKSLEGNTTLVELDLSSNRVGDEGAIAFARTLK-NNSS 323

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEM 588
           L S+  A N I ++GA ++  A+  +    +  ++L    L     S + + K +  EM
Sbjct: 324 LESLYAAKNNITENGACSLLNAVMQSSGSTMIKIDLTGAILKDDFHSLVEELKIVKPEM 382



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 92/194 (47%), Gaps = 1/194 (0%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           A+ L  N    E+  + N + A G       L+ N  L  L ++GN + D+    LC  L
Sbjct: 147 AKLLRENYYITELDISENQVGARGTLEIAETLKMNNTLTKLGMAGNDLSDKEAALLCSAL 206

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           + N+ V R+ LS     ++  + I  LL  +  L  L+L+ N I   G   +A+ L  N 
Sbjct: 207 LVNSTVTRIDLSGNKFSNKACEYIGALLDESYSLEYLDLSWNHIQVKGAQRIAKGLEGNM 266

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            +++L L  N     GA ALAK LEGN +L EL L  N +GDEG  A    L +    L 
Sbjct: 267 KLKTLKLAWNGVATDGAIALAKSLEGNTTLVELDLSSNRVGDEGAIAFARTLKN-NSSLE 325

Query: 363 VLDIGNNSISAKGA 376
            L    N+I+  GA
Sbjct: 326 SLYAAKNNITENGA 339



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 7/267 (2%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M     G  G+  ++ +L YN T   ++   NGI   G +    +L+ N  +  L++S N
Sbjct: 105 MMHHGLGPVGVQAISLALLYNTTITVLNIRDNGIGEEGGEIIAKLLRENYYITELDISEN 164

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            +G  G   + + L  N  + +L ++  DL D+ A  +   L  NS +  ++L+ N    
Sbjct: 165 QVGARGTLEIAETLKMNNTLTKLGMAGNDLSDKEAALLCSALLVNSTVTRIDLSGNKFSN 224

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
                +   L E+ ++  L L+ N+    GA  +AKGLEGN  L+ L L  N +  +G  
Sbjct: 225 KACEYIGALLDESYSLEYLDLSWNHIQVKGAQRIAKGLEGNMKLKTLKLAWNGVATDGAI 284

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   L      L  LD+ +N +  +GA   A  +KN  SL  +    N+I + GA  + 
Sbjct: 285 ALAKSLEGNT-TLVELDLSSNRVGDEGAIAFARTLKNNSSLESLYAAKNNITENGACSLL 343

Query: 409 DALKQN--RTITTIDLGG----NNIHS 429
           +A+ Q+   T+  IDL G    ++ HS
Sbjct: 344 NAVMQSSGSTMIKIDLTGAILKDDFHS 370



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 11/219 (5%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           KL RE     N +  EL      D+S    G  G   +AE+L  N T  ++  A N ++ 
Sbjct: 148 KLLRE-----NYYITEL------DISENQVGARGTLEIAETLKMNNTLTKLGMAGNDLSD 196

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L  N  +  ++LSGN   ++  + +  +L ++  +E L LS   ++ +GA+
Sbjct: 197 KEAALLCSALLVNSTVTRIDLSGNKFSNKACEYIGALLDESYSLEYLDLSWNHIQVKGAQ 256

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            IA+ L+ N  L+ L+L  N +   G  +LA++L  N+T+  L L+ N  G  GA A A+
Sbjct: 257 RIAKGLEGNMKLKTLKLAWNGVATDGAIALAKSLEGNTTLVELDLSSNRVGDEGAIAFAR 316

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
            L+ N SL  L+   N+I + G  +L++ +    G   +
Sbjct: 317 TLKNNSSLESLYAAKNNITENGACSLLNAVMQSSGSTMI 355



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           + +  + +G  G + I+ AL  N TIT +++  N I  +G   IA++L++N  IT LD++
Sbjct: 103 MTMMHHGLGPVGVQAISLALLYNTTITVLNIRDNGIGEEGGEIIAKLLRENYYITELDIS 162

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +GA G   ++E LK +  +  L +    +    A  +   L  N+T++ +DL  N  
Sbjct: 163 ENQVGARGTLEIAETLKMNNTLTKLGMAGNDLSDKEAALLCSALLVNSTVTRIDLSGNKF 222

Query: 512 RDEGAK----CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
            ++  +     L +S+     +L  +DL++N I+  GA  IA+ L+ N  + + +L LA 
Sbjct: 223 SNKACEYIGALLDESY-----SLEYLDLSWNHIQVKGAQRIAKGLEGN--MKLKTLKLAW 275

Query: 568 NFLTKFGQSAL 578
           N +   G  AL
Sbjct: 276 NGVATDGAIAL 286


>gi|224060897|ref|XP_002194083.1| PREDICTED: leucine-rich repeat-containing protein 34 [Taeniopygia
           guttata]
          Length = 385

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 27/219 (12%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N ++  GA  +A +++   +L ++NL  NDIG  GAE IA AL  N+++  + + 
Sbjct: 81  LDLAYNLLTDAGAKIMATFLQENSTLQYLNLMFNDIGTSGAELIAGALHSNQSLVHLRMT 140

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD------------------------- 458
           GN I ++G    A +LK+NS +  LDL    +                            
Sbjct: 141 GNKIGNQGGMFFASMLKNNSALEKLDLGDCDVEETTVHMARMLRSNSSLVELHLGKHEMK 200

Query: 459 --GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G + L E L  + ++  L L    I   G EF+ ++LR N ++ ILDL AN + D GA
Sbjct: 201 NFGVERLCEALYENSSLRYLDLSCNNIICDGVEFLGELLRRNRSLEILDLGANRIEDVGA 260

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            CL+Q+    N  L ++ +  N I   G  A+AQA+ +N
Sbjct: 261 ICLSQALATRNRTLQALSVVSNNITGQGLVALAQAMHSN 299



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 1/235 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + +D++     D G   +A  L  N T + ++   N I  +G +   G L SN +L  L 
Sbjct: 79  TGLDLAYNLLTDAGAKIMATFLQENSTLQYLNLMFNDIGTSGAELIAGALHSNQSLVHLR 138

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           ++GN IG++G      +L +N+ +E+L L   D+ +E    +A +L++NS L  L L  +
Sbjct: 139 MTGNKIGNQGGMFFASMLKNNSALEKLDLGDCDV-EETTVHMARMLRSNSSLVELHLGKH 197

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +   G   L EAL ENS++R L L+ N     G   L + L  N+SL  L L  N I D
Sbjct: 198 EMKNFGVERLCEALYENSSLRYLDLSCNNIICDGVEFLGELLRRNRSLEILDLGANRIED 257

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            G   L   L++R   L  L + +N+I+ +G   +A+ + +  +L  I ++ N I
Sbjct: 258 VGAICLSQALATRNRTLQALSVVSNNITGQGLVALAQAMHSNMALSHIYIWGNKI 312



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 142/299 (47%), Gaps = 10/299 (3%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+ L  LA  LG       +  A N +T AG K     LQ N  L+ LNL  N IG  G 
Sbjct: 62  DDDLGVLASVLGQAAFVTGLDLAYNLLTDAGAKIMATFLQENSTLQYLNLMFNDIGTSGA 121

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + +   L  N  +  L+++   + ++G    A +LKNNS L  L+L +  ++ +    +A
Sbjct: 122 ELIAGALHSNQSLVHLRMTGNKIGNQGGMFFASMLKNNSALEKLDLGDCDVEETT-VHMA 180

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
             L  NS++  LHL  +     G   L + L  N SLR L L  N+I  +G+   +  L 
Sbjct: 181 RMLRSNSSLVELHLGKHEMKNFGVERLCEALYENSSLRYLDLSCNNIICDGVE-FLGELL 239

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
            R   L +LD+G N I   GA  +++ +  +N ++L  +++  N+I  +G   +A A+  
Sbjct: 240 RRNRSLEILDLGANRIEDVGAICLSQALATRN-RTLQALSVVSNNITGQGLVALAQAMHS 298

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHG 471
           N  ++ I + GN I      A + ++    + +   D+A  P   DG   L+E  + HG
Sbjct: 299 NMALSHIYIWGNKIDRSTCVAFSELMAVGRLELGCTDVA--PYEVDGEVLLAE--QSHG 353



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 2/169 (1%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + D+    +A  L Q   +T +DL  N +   GA  +A  L++NS +  L+L +N IG  
Sbjct: 60  VTDDDLGVLASVLGQAAFVTGLDLAYNLLTDAGAKIMATFLQENSTLQYLNLMFNDIGTS 119

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA+ ++  L  + ++  L++   +IG  G  F A ML+ N+ +  LDL  +   +E    
Sbjct: 120 GAELIAGALHSNQSLVHLRMTGNKIGNQGGMFFASMLKNNSALEKLDL-GDCDVEETTVH 178

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           +A+  +  N +L  + L  +E+++ G   + +AL  N  +    L+  N
Sbjct: 179 MARMLR-SNSSLVELHLGKHEMKNFGVERLCEALYENSSLRYLDLSCNN 226


>gi|397474930|ref|XP_003808908.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Pan paniscus]
          Length = 471

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G K +   LV N  V +L+L    + +EG  ++ E+L+ N  L
Sbjct: 87  NMEESYMNLNHHGLGPRGTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 277 RVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + + ++NN +   G   +++    N S+I SL L+GN      A  L + L  N  +++L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKL 206

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N   D G   L   L+   G L  LD+  N+   +GA  +   ++   +L  ++L 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLAINVG-LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS 265

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G+E A  + + L+ N  +  +D+GGN+I ++GAS I++ L+ N  +  L L  NPI
Sbjct: 266 MNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 456 GADGA 460
             DGA
Sbjct: 326 NMDGA 330



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 131/262 (50%), Gaps = 3/262 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 93  MNLNHHGLGPRGTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 151

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  ++ A  +  AL  N  I  +DL  N
Sbjct: 152 SNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L     G 
Sbjct: 212 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
             A  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 272 EVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLES-NESLRVLKLFLNPINMDGA 330

Query: 546 FAIAQALKANEDVAVTSLNLAN 567
             +  A+K N    +  L+++N
Sbjct: 331 ILLILAIKRNPKSRMEELDISN 352



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 30/264 (11%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N  +  LEL +N I   G  SL E L EN  ++ ++++ N+ G  GA  
Sbjct: 104 GTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARI 163

Query: 322 LAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++   E N S +  L L GN   ++    L   LS+   ++  LD+ +N  S        
Sbjct: 164 ISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNY-RIKKLDLSHNQFS-------- 214

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
                               D G E +   L  N  +T++DL  NN H++GA A+   L+
Sbjct: 215 --------------------DVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLR 254

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T LDL+ N  G + A AL EVL+ +  +  L +G   IG  GA  ++  L  N +
Sbjct: 255 GNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISKGLESNES 314

Query: 501 ISILDLRANGLRDEGAKCLAQSFK 524
           + +L L  N +  +GA  L  + K
Sbjct: 315 LRVLKLFLNPINMDGAILLILAIK 338



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 129/252 (51%), Gaps = 7/252 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +  +   + +E  +S   L+ HG  +G  G +A+   L S    +  L++ +N I  +
Sbjct: 77  GVVPVSYFIRNME--ESYMNLNHHG--LGPRGTKAIAIALVSNP-TVTKLELEDNCIMEE 131

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
           G   + E ++    L  +N+  N +G EGA  I+D  ++N + I +++L GN+     A+
Sbjct: 132 GVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAA 191

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            + + L  N  I  LDL++N     G + L ++L  +  + +L L W      GA  + +
Sbjct: 192 LLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCN 251

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            LR N T++ LDL  NG  +E A  L +  + +N  L  +D+  N+I ++GA  I++ L+
Sbjct: 252 GLRGNVTLTKLDLSMNGFGNEVALALGEVLR-LNSCLVYLDIGGNDIGNEGASKISKGLE 310

Query: 554 ANEDVAVTSLNL 565
           +NE + V  L L
Sbjct: 311 SNESLRVLKLFL 322



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 2/251 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G   +A +L  N T  ++    N I   G+ +   +LQ N  L+ +N
Sbjct: 91  SYMNLNHHGLGPRGTKAIAIALVSNPTVTKLELEDNCIMEEGVLSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D    N + +  L+LS  D +++ A  + + L  N  ++ L+L++
Sbjct: 151 ISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQALSTNYRIKKLDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL L+ N     GA AL  GL GN +L +L L  N  G
Sbjct: 211 NQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +E   AL   L      L  LDIG N I  +GA  +++ +++ +SL  + L++N I  +G
Sbjct: 271 NEVALALGEVLRLNSC-LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDG 329

Query: 404 AEKIADALKQN 414
           A  +  A+K+N
Sbjct: 330 AILLILAIKRN 340



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 5/195 (2%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   V+ +I+N +   ++NL  + +G  G + IA AL  N T+T ++L  N I  +G  +
Sbjct: 77  GVVPVSYFIRNMEES-YMNLNHHGLGPRGTKAIAIALVSNPTVTKLELEDNCIMEEGVLS 135

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVAD 493
           +  +L++N  +  ++++ N +G +GA+ +S+  + +  +I +L+L         A  +  
Sbjct: 136 LVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKEDSAALLCQ 195

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L  N  I  LDL  N   D G + L Q    +N  LTS+DL++N     GA A+   L+
Sbjct: 196 ALSTNYRIKKLDLSHNQFSDVGGEHLGQML-AINVGLTSLDLSWNNFHTRGAVALCNGLR 254

Query: 554 ANEDVAVTSLNLANN 568
            N  V +T L+L+ N
Sbjct: 255 GN--VTLTKLDLSMN 267



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 128 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWSLELSGNDFKE 187

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 188 DSAALLCQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 247

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N        +L E L  NS +  L + GN  G  GA+ ++K
Sbjct: 248 ALCNGLRGNVTLTKLDLSMNGFGNEVALALGEVLRLNSCLVYLDIGGNDIGNEGASKISK 307

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 308 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 358


>gi|289666778|ref|NP_699184.2| leucine-rich repeat-containing protein 34 isoform 3 [Homo sapiens]
          Length = 432

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+G N +   GA++ A+ ++   +L+++NL  NDIG EG E IA  L +NRT+  + + 
Sbjct: 128 LDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMT 187

Query: 424 GNNIHSKG---------------------------ASAIARVLKDNSVITSLDLAYNPIG 456
           GN I +KG                              + R+LK+N  + +L +  + I 
Sbjct: 188 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLEESTVHVGRMLKENHCLVALHMCKHDIK 247

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G + L + L  + ++  L +   +I   G  ++AD+L+ N T+ ++DL  N + + GA
Sbjct: 248 NSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGA 307

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             L+++    N +L ++ +  N I  +G  A++Q++K N
Sbjct: 308 NYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTN 346



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 123/269 (45%), Gaps = 3/269 (1%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +T         +L++ + +  L++  N + D G      +L     +  L L   D+  E
Sbjct: 107 VTGEDFWILSKILKNCLYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPE 166

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G + IA++L  N  L+ L +  N I+  G    A  L  NS++  L L G+         
Sbjct: 167 GGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDL-GDCDLEESTVH 225

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           + + L+ N  L  LH+  + I + GI+ L   L      L  LD+  N I+  G  ++A+
Sbjct: 226 VGRMLKENHCLVALHMCKHDIKNSGIQQLCDALY-LNSSLRYLDVSCNKITHDGMVYLAD 284

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLK 440
            +K+  +L  I+L  N I + GA  +++ L   NR++  + +  NNI  +G  A+++ +K
Sbjct: 285 VLKSNTTLEVIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMK 344

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKF 469
            N   + + +  N        A S++++ 
Sbjct: 345 TNLTFSHIYIWGNKFDEATCIAYSDLIQM 373



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 1/231 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L++  K     + +D+      D G ++ A+ L        ++   N I   G +    V
Sbjct: 115 LSKILKNCLYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKV 174

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  LK L ++GN I ++G      +L  N+ +E+L L   DL +E    +  +LK N
Sbjct: 175 LHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDL-EESTVHVGRMLKEN 233

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L +  + I  SG   L +AL  NS++R L ++ N     G   LA  L+ N +L 
Sbjct: 234 HCLVALHMCKHDIKNSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLE 293

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            + L  N I + G   L   L+S    L  L + +N+I  +G   +++ +K
Sbjct: 294 VIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMK 344



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 14/197 (7%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN-------IHSKGASAIARVLKDNSV 444
           IN ++  I  E  E+I   L       T+++ GNN       +  +    ++++LK+   
Sbjct: 68  INPFILHILQEVDEEIKKGLAAG---ITLNIAGNNRLVPVERVTGEDFWILSKILKNCLY 124

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           I  LD+ YN +   GA   +++L+   N+  L L +  IG  G E +A +L  N T+  L
Sbjct: 125 INGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYL 184

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            +  N + ++G    A   + +N +L  +DL   ++ ++    + + LK N    + +L+
Sbjct: 185 RMTGNKIENKGGMFFAAMLQ-INSSLEKLDLGDCDL-EESTVHVGRMLKENH--CLVALH 240

Query: 565 LANNFLTKFGQSALTDA 581
           +  + +   G   L DA
Sbjct: 241 MCKHDIKNSGIQQLCDA 257


>gi|405978407|gb|EKC42798.1| hypothetical protein CGI_10015924 [Crassostrea gigas]
          Length = 421

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 126/245 (51%), Gaps = 3/245 (1%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            +A  L  N S+  L L GN+IG +G+  ++  L      +  L+I +N + +K    + 
Sbjct: 118 TIAYALTTNNSVTSLDLSGNNIGHKGLLDVLRMLDENTS-ITYLNISHNKLGSKAVIILR 176

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + I + K +L +    ND  D+ AE+IAD ++Q  T+ +++L  N    +G   IA  L+
Sbjct: 177 DLISSTKKILTLEAAGNDFNDKDAEQIADGIRQTNTLRSLNLSQNAFQERGGEDIAGALE 236

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
           +N  +  L+L++N +  DGA A+   L  +  +  L L W      G + +   L+ N+T
Sbjct: 237 ENMSLKELNLSWNHLRLDGAIAVGAALSTNSTLQALYLAWNGFSNCGCQEIGTALQTNST 296

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           + +LDL  N +  EGAK LA+   ++N  L  + +  N +   GA  I  A++ N + A+
Sbjct: 297 LELLDLSNNRVGLEGAKWLAKGL-MLNSKLRHL-MNMNSLTTLGAKTILLAIRDNPESAI 354

Query: 561 TSLNL 565
            +L L
Sbjct: 355 DTLEL 359



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 100/187 (53%), Gaps = 3/187 (1%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMND--IGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           ++A    HVA   K  +SL    +   +  +  +  E IA AL  N ++T++DL GNNI 
Sbjct: 81  VNACKHLHVAPGKKILRSLSSTQMSAKERIVNTKEVETIAYALTTNNSVTSLDLSGNNIG 140

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            KG   + R+L +N+ IT L++++N +G+     L +++     I TL+          A
Sbjct: 141 HKGLLDVLRMLDENTSITYLNISHNKLGSKAVIILRDLISSTKKILTLEAAGNDFNDKDA 200

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           E +AD +R  NT+  L+L  N  ++ G + +A + +  N +L  ++L++N +R DGA A+
Sbjct: 201 EQIADGIRQTNTLRSLNLSQNAFQERGGEDIAGALE-ENMSLKELNLSWNHLRLDGAIAV 259

Query: 549 AQALKAN 555
             AL  N
Sbjct: 260 GAALSTN 266



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 140/299 (46%), Gaps = 30/299 (10%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K LR+ SS  MS +           E +   +  E +++A               L +N 
Sbjct: 94  KILRSLSSTQMSAK-----------ERIVNTKEVETIAYA---------------LTTNN 127

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           ++ +L+LSGN IG +G+  +  +L +N  +  L +S   L  +    + +L+ +   +  
Sbjct: 128 SVTSLDLSGNNIGHKGLLDVLRMLDENTSITYLNISHNKLGSKAVIILRDLISSTKKILT 187

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           LE   N  +      +A+ + + +T+RSL+L+ N     G   +A  LE N SL+EL+L 
Sbjct: 188 LEAAGNDFNDKDAEQIADGIRQTNTLRSLNLSQNAFQERGGEDIAGALEENMSLKELNLS 247

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +  +G  A+ + LS+    L  L +  N  S  G   +   ++   +L  ++L  N 
Sbjct: 248 WNHLRLDGAIAVGAALST-NSTLQALYLAWNGFSNCGCQEIGTALQTNSTLELLDLSNNR 306

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLAYNPI 455
           +G EGA+ +A  L  N  +  + +  N++ + GA  I   ++DN  S I +L+L   P+
Sbjct: 307 VGLEGAKWLAKGLMLNSKLRHL-MNMNSLTTLGAKTILLAIRDNPESAIDTLELKEIPV 364



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 30/257 (11%)

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            + IA  L  N+ +  L+L+ N I + G   +   L EN++I  L+++ N    LG+ A+
Sbjct: 116 VETIAYALTTNNSVTSLDLSGNNIGHKGLLDVLRMLDENTSITYLNISHN---KLGSKAV 172

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
                                      ++  L S   K+  L+   N  + K A  +A+ 
Sbjct: 173 --------------------------IILRDLISSTKKILTLEAAGNDFNDKDAEQIADG 206

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           I+   +L  +NL  N   + G E IA AL++N ++  ++L  N++   GA A+   L  N
Sbjct: 207 IRQTNTLRSLNLSQNAFQERGGEDIAGALEENMSLKELNLSWNHLRLDGAIAVGAALSTN 266

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S + +L LA+N     G + +   L+ +  +  L L   ++G  GA+++A  L  N+ + 
Sbjct: 267 STLQALYLAWNGFSNCGCQEIGTALQTNSTLELLDLSNNRVGLEGAKWLAKGLMLNSKLR 326

Query: 503 ILDLRANGLRDEGAKCL 519
            L +  N L   GAK +
Sbjct: 327 HL-MNMNSLTTLGAKTI 342


>gi|23270956|gb|AAH32841.1| Leucine rich repeat containing 34 [Homo sapiens]
          Length = 419

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 123/249 (49%), Gaps = 32/249 (12%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+G N +   GA++ A+ ++   +L+++NL  NDIG EG E IA  L +NRT+  + + 
Sbjct: 115 LDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMT 174

Query: 424 GNNIHSKG---------------------------ASAIARVLKDNSVITSLDLAYNPIG 456
           GN I +KG                              + R+LK+N  + +L +  + I 
Sbjct: 175 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLEESTVHVGRMLKENHCLVALHMCKHDIK 234

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G + L + L  + ++  L +   +I   G  ++AD+L+ N T+ ++DL  N + + GA
Sbjct: 235 NSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGA 294

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 576
             L+++    N +L ++ +  N I  +G  A++Q++K N  +  + + +  N   KF ++
Sbjct: 295 NYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTN--LTFSHIYIWGN---KFDEA 349

Query: 577 ALTDAKDLV 585
                 DL+
Sbjct: 350 TCITYSDLI 358



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 1/231 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L++  K     + +D+      D G ++ A+ L        ++   N I   G +    V
Sbjct: 102 LSKILKNCLYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKV 161

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  LK L ++GN I ++G      +L  N+ +E+L L   DL +E    +  +LK N
Sbjct: 162 LHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDL-EESTVHVGRMLKEN 220

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L +  + I  SG   L +AL  NS++R L ++ N     G   LA  L+ N +L 
Sbjct: 221 HCLVALHMCKHDIKNSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLE 280

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            + L  N I + G   L   L+S    L  L + +N+I  +G   +++ +K
Sbjct: 281 VIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMK 331



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 125/268 (46%), Gaps = 19/268 (7%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +LQ  + L  LNL  N IG EG + +  +L  N  ++ L+++   + ++G    A +L+ 
Sbjct: 133 LLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQI 192

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           NS L  L+L +  ++ S    +   L EN  + +LH+  +     G   L   L  N SL
Sbjct: 193 NSSLEKLDLGDCDLEEST-VHVGRMLKENHCLVALHMCKHDIKNSGIQQLCDALYLNSSL 251

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI-KNCKSLLW 391
           R L +  N I  +G+  L   L S    L V+D+  N I   GA +++E +  + +SL  
Sbjct: 252 RYLDVSCNKITHDGMVYLADVLKSNT-TLEVIDLSFNRIENAGANYLSETLTSHNRSLKA 310

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK------DNSVI 445
           +++  N+I  EG   ++ ++K N T + I + GN          + +++      DN+ +
Sbjct: 311 LSVVSNNIEGEGLVALSQSMKTNLTFSHIYIWGNKFDEATCITYSDLIQMGCLKPDNTDV 370

Query: 446 TSLDLAYNPIGADGAKALSEV---LKFH 470
                   P   DG   L+EV   LK H
Sbjct: 371 -------EPFVVDGRVYLAEVSNGLKKH 391



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 31/268 (11%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +T         +L++ + +  L++  N + D G      +L     +  L L   D+  E
Sbjct: 94  VTGEDFWILSKILKNCLYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPE 153

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G + IA++L  N  L+ L +  N I+  G    A  L  NS++  L L G+         
Sbjct: 154 GGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDL-GDCDLEESTVH 212

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           + + L+ N  L  LH+  + I + GI+ L   L                           
Sbjct: 213 VGRMLKENHCLVALHMCKHDIKNSGIQQLCDAL--------------------------- 245

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL-K 440
           Y+ +  SL ++++  N I  +G   +AD LK N T+  IDL  N I + GA+ ++  L  
Sbjct: 246 YLNS--SLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGANYLSETLTS 303

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLK 468
            N  + +L +  N I  +G  ALS+ +K
Sbjct: 304 HNRSLKALSVVSNNIEGEGLVALSQSMK 331



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 14/197 (7%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN-------IHSKGASAIARVLKDNSV 444
           IN ++  I  E  E+I   L       T+++ GNN       +  +    ++++LK+   
Sbjct: 55  INPFILHILQEVDEEIKKGLAAG---ITLNIAGNNRLVPVERVTGEDFWILSKILKNCLY 111

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           I  LD+ YN +   GA   +++L+   N+  L L +  IG  G E +A +L  N T+  L
Sbjct: 112 INGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYL 171

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            +  N + ++G    A   + +N +L  +DL   ++ ++    + + LK N    + +L+
Sbjct: 172 RMTGNKIENKGGMFFAAMLQ-INSSLEKLDLGDCDL-EESTVHVGRMLKENH--CLVALH 227

Query: 565 LANNFLTKFGQSALTDA 581
           +  + +   G   L DA
Sbjct: 228 MCKHDIKNSGIQQLCDA 244


>gi|426342828|ref|XP_004038034.1| PREDICTED: leucine-rich repeat-containing protein 34 isoform 2
           [Gorilla gorilla gorilla]
          Length = 432

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+G N +   GA++ A+ ++   +L+++NL  NDIG EG E IA  L +NRT+  + + 
Sbjct: 128 LDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMT 187

Query: 424 GNNIHSKG---------------------------ASAIARVLKDNSVITSLDLAYNPIG 456
           GN I +KG                              + R+LK+N  + +L +  + I 
Sbjct: 188 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLEESTVHVGRMLKENHCLVALHMCKHDIK 247

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G + L + L  + ++  L +   +I   G  ++AD+L+ N T+ ++DL  N + + GA
Sbjct: 248 NSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGA 307

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             L+++    N +L ++ +  N I  +G  A++Q++K N
Sbjct: 308 NYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTN 346



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 123/268 (45%), Gaps = 3/268 (1%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +T         +L++ + +  L++  N + D G      +L     +  L L   D+  E
Sbjct: 107 VTGEDFWILSKILKNCLYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPE 166

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G + IA++L  N  L+ L +  N I+  G    A  L  NS++  L L G+         
Sbjct: 167 GGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDL-GDCDLEESTVH 225

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           + + L+ N  L  LH+  + I + GI+ L   L      L  LD+  N I+  G  ++A+
Sbjct: 226 VGRMLKENHCLVALHMCKHDIKNSGIQQLCDALY-LNSSLRYLDVSCNKITHDGMVYLAD 284

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLK 440
            +K+  +L  I+L  N I + GA  +++ L   NR++  + +  NNI  +G  A+++ +K
Sbjct: 285 VLKSNTTLEVIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMK 344

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLK 468
            N   + + +  N        A S++++
Sbjct: 345 TNLTFSHIYIWGNKFDEATCVAYSDLIQ 372



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 1/259 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L++  K     + +D+      D G ++ A+ L        ++   N I   G +    V
Sbjct: 115 LSKILKNCLYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKV 174

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  LK L ++GN I ++G      +L  N+ +E+L L   DL +E    +  +LK N
Sbjct: 175 LHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDL-EESTVHVGRMLKEN 233

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L +  + I  SG   L +AL  NS++R L ++ N     G   LA  L+ N +L 
Sbjct: 234 HCLVALHMCKHDIKNSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLE 293

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            + L  N I + G   L   L+S    L  L + +N+I  +G   +++ +K   +   I 
Sbjct: 294 VIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTNLTFSHIY 353

Query: 394 LYMNDIGDEGAEKIADALK 412
           ++ N   +      +D ++
Sbjct: 354 IWGNKFDEATCVAYSDLIQ 372



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 14/197 (7%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN-------IHSKGASAIARVLKDNSV 444
           IN ++  I  E  E+I   L       T+++ GNN       +  +    ++++LK+   
Sbjct: 68  INPFILHILQEVDEEIKKGLAAG---ITLNIAGNNRLVPVERVTGEDFWILSKILKNCLY 124

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           I  LD+ YN +   GA   +++L+   N+  L L +  IG  G E +A +L  N T+  L
Sbjct: 125 INGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYL 184

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            +  N + ++G    A   + +N +L  +DL   ++ ++    + + LK N    + +L+
Sbjct: 185 RMTGNKIENKGGMFFAAMLQ-INSSLEKLDLGDCDL-EESTVHVGRMLKENH--CLVALH 240

Query: 565 LANNFLTKFGQSALTDA 581
           +  + +   G   L DA
Sbjct: 241 MCKHDIKNSGIQQLCDA 257


>gi|386336010|ref|YP_006032180.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
 gi|334198460|gb|AEG71644.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
          Length = 1053

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 192/431 (44%), Gaps = 91/431 (21%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            LSG TG    E+   L   A+      S+D+SG   GD  +  LA S         ++ +
Sbjct: 654  LSGCTGSAVSEAG--LAVLAR--LPLESLDLSGTRIGDREVQALASSTSLT----SLNLS 705

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N I  AG +A    L  N  L  LN+S NPI D GV+ L D            L+S++L
Sbjct: 706  GNRIGDAGARA----LGRNTVLTALNVSANPIRDTGVQALAD---------SRSLTSLEL 752

Query: 259  RDEG---AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            R  G    +A    L +N++LR L++++N +       LA     N T+ SL  N     
Sbjct: 753  RGIGIGIGEASIAALASNTVLRSLDISSNDLSEQSAAELAR----NQTLASLKAN----- 803

Query: 316  ALG-ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            A G  N +A+ L   +SLR L +  NSIGD G+ A+     +R   L  L++ +N I+ +
Sbjct: 804  ACGLTNGMAQQLARIRSLRTLEVGSNSIGDTGVLAI-----ARNASLRTLNLSHNPITLQ 858

Query: 375  GAFHV--------------------AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
            G   +                    A  +   + L  + L  N IG  GA+++A     N
Sbjct: 859  GLCPLELSRTLTSLDVSGIGCGDRGALLLSKNRVLTSLKLGFNGIGSAGAQRLA----AN 914

Query: 415  RTITTIDLGGNNIHSKGASAIARVLKDNSV--------------------ITSLDLAYNP 454
            RT+ ++DL GN I    A A+A   +  S+                    +TSLD++ N 
Sbjct: 915  RTLISLDLRGNTIDVDAAKALANTGRLTSLNVSDCKLDDAAASALAESLTLTSLDVSVNR 974

Query: 455  IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            +    A+AL+     +  + +L +    IG  GA  +A+    + ++++LD RAN + + 
Sbjct: 975  LSGRAAQALA----GNATLTSLNISHNHIGPDGARALAE----SPSLTVLDARANDIGEA 1026

Query: 515  GAKCLAQSFKV 525
            GA+ L  + ++
Sbjct: 1027 GARALENNTRM 1037



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 184/388 (47%), Gaps = 72/388 (18%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE----- 268
            L S+ +L +LNLSGN IGD G + L      N  +  L +S+  +RD G +A+A+     
Sbjct: 693  LASSTSLTSLNLSGNRIGDAGARALG----RNTVLTALNVSANPIRDTGVQALADSRSLT 748

Query: 269  -----------------LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
                              L +N++LR L++++N +       LA     N T+ SL  N 
Sbjct: 749  SLELRGIGIGIGEASIAALASNTVLRSLDISSNDLSEQSAAELA----RNQTLASLKAN- 803

Query: 312  NYGGALG-ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                A G  N +A+ L   +SLR L +  NSIGD G+ A+     +R   L  L++ +N 
Sbjct: 804  ----ACGLTNGMAQQLARIRSLRTLEVGSNSIGDTGVLAI-----ARNASLRTLNLSHNP 854

Query: 371  ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
            I+ +G       ++  ++L  +++     GD GA      L +NR +T++ LG N I S 
Sbjct: 855  ITLQGLC----PLELSRTLTSLDVSGIGCGDRGAL----LLSKNRVLTSLKLGFNGIGSA 906

Query: 431  GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
            GA  +A     N  + SLDL  N I  D AKAL+      G + +L +  C++     + 
Sbjct: 907  GAQRLAA----NRTLISLDLRGNTIDVDAAKALANT----GRLTSLNVSDCKL----DDA 954

Query: 491  VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
             A  L  + T++ LD+  N L    A+ LA      N  LTS++++ N I  DGA A+A 
Sbjct: 955  AASALAESLTLTSLDVSVNRLSGRAAQALAG-----NATLTSLNISHNHIGPDGARALA- 1008

Query: 551  ALKANEDVAVTSLNLANNFLTKFGQSAL 578
                 E  ++T L+   N + + G  AL
Sbjct: 1009 -----ESPSLTVLDARANDIGEAGARAL 1031



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 169/396 (42%), Gaps = 109/396 (27%)

Query: 276  LRVLELNNNMIDYSGFTSLAE-----ALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
            LR L  +   +D SG T  A      A+L    + SL L+G   G     ALA     + 
Sbjct: 642  LRALPPSVRRLDLSGCTGSAVSEAGLAVLARLPLESLDLSGTRIGDREVQALAS----ST 697

Query: 331  SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY-------- 382
            SL  L+L GN IGD G RAL      R   L  L++  N I   G   +A+         
Sbjct: 698  SLTSLNLSGNRIGDAGARAL-----GRNTVLTALNVSANPIRDTGVQALADSRSLTSLEL 752

Query: 383  --------------IKNCKSLLWINLYMNDIGDEGAEKIAD-----ALKQN--------- 414
                          + +   L  +++  ND+ ++ A ++A      +LK N         
Sbjct: 753  RGIGIGIGEASIAALASNTVLRSLDISSNDLSEQSAAELARNQTLASLKANACGLTNGMA 812

Query: 415  ------RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG------AKA 462
                  R++ T+++G N+I   G  AIAR    N+ + +L+L++NPI   G      ++ 
Sbjct: 813  QQLARIRSLRTLEVGSNSIGDTGVLAIAR----NASLRTLNLSHNPITLQGLCPLELSRT 868

Query: 463  LSE--------------VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            L+               +L  +  + +LKLG+  IG++GA+ +A     N T+  LDLR 
Sbjct: 869  LTSLDVSGIGCGDRGALLLSKNRVLTSLKLGFNGIGSAGAQRLA----ANRTLISLDLRG 924

Query: 509  NGLRDEGAKCLAQSFKVVN-------------------EALTSIDLAFNEIRDDGAFAIA 549
            N +  + AK LA + ++ +                     LTS+D++ N +    +   A
Sbjct: 925  NTIDVDAAKALANTGRLTSLNVSDCKLDDAAASALAESLTLTSLDVSVNRL----SGRAA 980

Query: 550  QALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
            QAL  N    +TSLN+++N +   G  AL ++  L 
Sbjct: 981  QALAGN--ATLTSLNISHNHIGPDGARALAESPSLT 1014



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 128/308 (41%), Gaps = 70/308 (22%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
           + L++LN++G  IGD+G                                A LL  N  L+
Sbjct: 153 LPLESLNVAGADIGDDG--------------------------------ARLLAANPSLK 180

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            L    N  +     + A AL E+  + SL L  N  G  GA ALA    G++SL  L +
Sbjct: 181 TL----NAANGGIGAAGARALAESPVLTSLDLTQNGIGDEGARALA----GSRSLTNLAV 232

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
               + D G +AL    +     L  LD+GN           A Y +            N
Sbjct: 233 LNCLVTDVGAQALAGNRT-----LTALDLGNLITETDNELEQAGYDRTA----------N 277

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           +I  +GA     AL QNR++T++ + GN     G  A+AR    N  +TSL++AY     
Sbjct: 278 EITAQGAW----ALAQNRSLTSLSIQGNLCGDGGVQALAR----NRTLTSLNVAYT---- 325

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           D   A +  L  +  + +L + W   G   A  V   L  + ++++LD R+ G+ + G  
Sbjct: 326 DMTPASATELARNPVLTSLSVRW-NYGLGDAGVVE--LAKSPSLTLLDARSTGMGERGTL 382

Query: 518 CLAQSFKV 525
            LA + ++
Sbjct: 383 ALAANARI 390



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 125/269 (46%), Gaps = 50/269 (18%)

Query: 330 KSLRELHLHGN--SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
           ++L ELH + N  S+  +G    ++ L +    L  LD+   + SAK +  +A Y+    
Sbjct: 97  RALSELHNYPNLTSLQLKG-NLTLTDLKALPATLRHLDLSACTGSAKSSGAIA-YLAGLP 154

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            L  +N+   DIGD+GA  +A     N ++ T+    N  +    +A AR L ++ V+TS
Sbjct: 155 -LESLNVAGADIGDDGARLLA----ANPSLKTL----NAANGGIGAAGARALAESPVLTS 205

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL- 506
           LDL  N IG +GA+AL+       N+  L    C +   GA+ +A     N T++ LDL 
Sbjct: 206 LDLTQNGIGDEGARALAGSRSLT-NLAVLN---CLVTDVGAQALAG----NRTLTALDLG 257

Query: 507 -----------------RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
                             AN +  +GA  LAQ     N +LTS+ +  N   D G  A+A
Sbjct: 258 NLITETDNELEQAGYDRTANEITAQGAWALAQ-----NRSLTSLSIQGNLCGDGGVQALA 312

Query: 550 QALKANEDVAVTSLNLANNFLTKFGQSAL 578
           +      +  +TSLN+A   +T    + L
Sbjct: 313 R------NRTLTSLNVAYTDMTPASATEL 335



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 61/292 (20%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S++++G + GD+G   LA     N + + +    N        A    L  +  L +L
Sbjct: 155 LESLNVAGADIGDDGARLLAA----NPSLKTL----NAANGGIGAAGARALAESPVLTSL 206

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L+ N IGDEG + L      +  +  L + +  + D GA+A+A     N  L  L+L N
Sbjct: 207 DLTQNGIGDEGARALAG----SRSLTNLAVLNCLVTDVGAQALA----GNRTLTALDLGN 258

Query: 284 ------NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
                 N ++ +G+   A  +                 A GA ALA+    N+SL  L +
Sbjct: 259 LITETDNELEQAGYDRTANEIT----------------AQGAWALAQ----NRSLTSLSI 298

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYM 396
            GN  GD G++AL     +R   L  L++    ++   A  +A   +    S+ W     
Sbjct: 299 QGNLCGDGGVQAL-----ARNRTLTSLNVAYTDMTPASATELARNPVLTSLSVRW----N 349

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA-----RVLKDNS 443
             +GD G  ++A    ++ ++T +D     +  +G  A+A     RV  DN+
Sbjct: 350 YGLGDAGVVELA----KSPSLTLLDARSTGMGERGTLALAANARIRVQHDNA 397


>gi|168026804|ref|XP_001765921.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682827|gb|EDQ69242.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 540

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 145/307 (47%), Gaps = 30/307 (9%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+++S    G++G+   +  LG   + E +SF  NGI+    +A   +L S+  L+TL
Sbjct: 215 LKSLNLSDNALGEKGVRAFSALLGSQNSLEALSFMNNGISVDAARAIREILPSSKELRTL 274

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
               N  GDEG   L   +V  A + E  Q SS  +  EG  A+ E L+    L+++++ 
Sbjct: 275 RFHNNMTGDEGALELATEVVGGAPLLEHFQFSSSRVGSEGGVALMEALQAGKSLKIIDIR 334

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +NM                         G  GGA    ALA  L  +  L+E++L    +
Sbjct: 335 DNMY------------------------GPEGGA----ALALALRSHTMLKEVYLSDLGL 366

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            DEG  A++  L+    ++ +L++G N I+ K A  +A  I++ + L  +NL  N++ D 
Sbjct: 367 EDEGALAVVKALTEASSQVTILELGGNEITEKVAPALATCIRSMRHLTRLNLMENELKDS 426

Query: 403 GAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           G   ++ A+ +    +  +DL  N +   GA A A+ + +      L+L  N I   G +
Sbjct: 427 GVVTVSTAIGEGLENLRELDLSVNELSRIGALAAAQAVGNKKHFKHLNLNGNQISEQGVE 486

Query: 462 ALSEVLK 468
           A+ E+L+
Sbjct: 487 AVQEMLR 493



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 135/284 (47%), Gaps = 5/284 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S ++SL+L+ N  G  G  A +  L    SL  L    N I  +  RA+   L S K
Sbjct: 210 LEGSKLKSLNLSDNALGEKGVRAFSALLGSQNSLEALSFMNNGISVDAARAIREILPSSK 269

Query: 359 GKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
            +L  L   NN    +GA  +A E +     L       + +G EG   + +AL+  +++
Sbjct: 270 -ELRTLRFHNNMTGDEGALELATEVVGGAPLLEHFQFSSSRVGSEGGVALMEALQAGKSL 328

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-KFHGNINTL 476
             ID+  N    +G +A+A  L+ ++++  + L+   +  +GA A+ + L +    +  L
Sbjct: 329 KIIDIRDNMYGPEGGAALALALRSHTMLKEVYLSDLGLEDEGALAVVKALTEASSQVTIL 388

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
           +LG  +I    A  +A  +R    ++ L+L  N L+D G   ++ +     E L  +DL+
Sbjct: 389 ELGGNEITEKVAPALATCIRSMRHLTRLNLMENELKDSGVVTVSTAIGEGLENLRELDLS 448

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
            NE+   GA A AQA+   +      LNL  N +++ G  A+ +
Sbjct: 449 VNELSRIGALAAAQAVGNKKH--FKHLNLNGNQISEQGVEAVQE 490



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 33/256 (12%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           + ++  LEG+K L+ L+L  N++G++G+RA  S L   +  L  L   NN IS   A  +
Sbjct: 204 STISSALEGSK-LKSLNLSDNALGEKGVRAF-SALLGSQNSLEALSFMNNGISVDAARAI 261

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIA-DALKQNRTITTIDLGGNNIHSKGASAIARV 438
            E + + K L  +  + N  GDEGA ++A + +     +       + + S+G  A+   
Sbjct: 262 REILPSSKELRTLRFHNNMTGDEGALELATEVVGGAPLLEHFQFSSSRVGSEGGVALMEA 321

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+    +  +D+  N  G +G  AL+  L+ H  +  +             +++D+    
Sbjct: 322 LQAGKSLKIIDIRDNMYGPEGGAALALALRSHTMLKEV-------------YLSDL---- 364

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
                      GL DEGA  + ++    +  +T ++L  NEI +  A A+A  +++    
Sbjct: 365 -----------GLEDEGALAVVKALTEASSQVTILELGGNEITEKVAPALATCIRSMRH- 412

Query: 559 AVTSLNLANNFLTKFG 574
            +T LNL  N L   G
Sbjct: 413 -LTRLNLMENELKDSG 427


>gi|428161855|gb|EKX31100.1| hypothetical protein GUITHDRAFT_83406, partial [Guillardia theta
           CCMP2712]
          Length = 376

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 176/375 (46%), Gaps = 38/375 (10%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
           G+   G  A   +L+S+     ++L GN I DEG K L  +L ++  +  L LSS ++  
Sbjct: 5   GLGGHGATAVAELLRSHPTYTHVDLGGNTIKDEGAKTLAGMLAESRSIRTLVLSSNEIGS 64

Query: 261 EGAKAIAELLKNNSILRVLELN------NNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           EGA A+   LK N  L  L+L        N I       LA AL  N T+ SL L GN  
Sbjct: 65  EGASALFAALKLNGCLETLDLGLVDNGRKNRIGRPCARDLAGALRGNETLTSLSLAGNNF 124

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G+ G  A+A+G E N  ++ L L  N I  E + +L +        L  L++ +N +  +
Sbjct: 125 GSEGCRAIAEGFEHNTRVKHLDLSMNKIRGE-VASLFASAFLSGASLETLNLSSNQVGHQ 183

Query: 375 GAFHVAEY-----------------------------IKNCKSLLWINLYMNDIGDEGAE 405
           G   +A+                              ++N + L  + L  N++G  G  
Sbjct: 184 GCASIAKMLSSDSLLLRSLNLSGNLVGPKAAALLAAGLENNRLLSELQLAGNELGATGCT 243

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            ++ +L +   +T + LG NNI  +G   + R L +NS + SLDL+ N IG  G  A+S+
Sbjct: 244 SLSGSLNKC-NVTLLALGENNIGDEGTLMLMRKLAENSSLKSLDLSSNQIGDYGGVAVSK 302

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
           +L+ + ++ +L L    IG  G   +A  L  N  +  L L++N   D+    L  + + 
Sbjct: 303 MLQSNASLTSLNLEKNLIGDRGGVEIAQGLGRNGVLLQLSLKSNMFHDKTGSALVVALR- 361

Query: 526 VNEALTSIDLAFNEI 540
            N+ LT +D+++N+I
Sbjct: 362 ANKTLTELDVSWNDI 376



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 156/363 (42%), Gaps = 65/363 (17%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  +    ++ VD+ G    DEG   LA  L  +++   +  ++N I + G  A    L+
Sbjct: 16  ELLRSHPTYTHVDLGGNTIKDEGAKTLAGMLAESRSIRTLVLSSNEIGSEGASALFAALK 75

Query: 216 SNIALKTLNLS------GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
            N  L+TL+L        N IG    + L   L  N  +  L L+  +   EG +AIAE 
Sbjct: 76  LNGCLETLDLGLVDNGRKNRIGRPCARDLAGALRGNETLTSLSLAGNNFGSEGCRAIAEG 135

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK----- 324
            ++N+ ++ L+L+ N I     +  A A L  +++ +L+L+ N  G  G  ++AK     
Sbjct: 136 FEHNTRVKHLDLSMNKIRGEVASLFASAFLSGASLETLNLSSNQVGHQGCASIAKMLSSD 195

Query: 325 ------------------------GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
                                   GLE N+ L EL L GN +G  G  +L   L+  K  
Sbjct: 196 SLLLRSLNLSGNLVGPKAAALLAAGLENNRLLSELQLAGNELGATGCTSLSGSLN--KCN 253

Query: 361 LAVLDIGNNSISAKGAFH----------------------------VAEYIKNCKSLLWI 392
           + +L +G N+I  +G                               V++ +++  SL  +
Sbjct: 254 VTLLALGENNIGDEGTLMLMRKLAENSSLKSLDLSSNQIGDYGGVAVSKMLQSNASLTSL 313

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           NL  N IGD G  +IA  L +N  +  + L  N  H K  SA+   L+ N  +T LD+++
Sbjct: 314 NLEKNLIGDRGGVEIAQGLGRNGVLLQLSLKSNMFHDKTGSALVVALRANKTLTELDVSW 373

Query: 453 NPI 455
           N I
Sbjct: 374 NDI 376



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 98/176 (55%), Gaps = 9/176 (5%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G  GA  +A+ L+ + T T +DLGGN I  +GA  +A +L ++  I +L L+ N IG++
Sbjct: 6   LGGHGATAVAELLRSHPTYTHVDLGGNTIKDEGAKTLAGMLAESRSIRTLVLSSNEIGSE 65

Query: 459 GAKALSEVLKFHGNINTLKLGWC------QIGASGAEFVADMLRYNNTISILDLRANGLR 512
           GA AL   LK +G + TL LG        +IG   A  +A  LR N T++ L L  N   
Sbjct: 66  GASALFAALKLNGCLETLDLGLVDNGRKNRIGRPCARDLAGALRGNETLTSLSLAGNNFG 125

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            EG + +A+ F+  N  +  +DL+ N+IR + A   A A  +    ++ +LNL++N
Sbjct: 126 SEGCRAIAEGFE-HNTRVKHLDLSMNKIRGEVASLFASAFLSG--ASLETLNLSSN 178



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 164/324 (50%), Gaps = 12/324 (3%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           L   GA A+AELL+++     ++L  N I   G  +LA  L E+ +IR+L L+ N  G+ 
Sbjct: 6   LGGHGATAVAELLRSHPTYTHVDLGGNTIKDEGAKTLAGMLAESRSIRTLVLSSNEIGSE 65

Query: 318 GANALAKGLEGNKSLRELHL------HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           GA+AL   L+ N  L  L L        N IG    R L   L   +  L  L +  N+ 
Sbjct: 66  GASALFAALKLNGCLETLDLGLVDNGRKNRIGRPCARDLAGALRGNE-TLTSLSLAGNNF 124

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
            ++G   +AE  ++   +  ++L MN I  E A   A A     ++ T++L  N +  +G
Sbjct: 125 GSEGCRAIAEGFEHNTRVKHLDLSMNKIRGEVASLFASAFLSGASLETLNLSSNQVGHQG 184

Query: 432 ASAIARVLKDNSVITSLDLAY-NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
            ++IA++L  +S++        N +G   A  L+  L+ +  ++ L+L   ++GA+G   
Sbjct: 185 CASIAKMLSSDSLLLRSLNLSGNLVGPKAAALLAAGLENNRLLSELQLAGNELGATGCTS 244

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           ++  L   N +++L L  N + DEG   L +     N +L S+DL+ N+I D G  A+++
Sbjct: 245 LSGSLNKCN-VTLLALGENNIGDEGTLMLMRKL-AENSSLKSLDLSSNQIGDYGGVAVSK 302

Query: 551 ALKANEDVAVTSLNLANNFLTKFG 574
            L++N   ++TSLNL  N +   G
Sbjct: 303 MLQSN--ASLTSLNLEKNLIGDRG 324


>gi|326678385|ref|XP_001346239.4| PREDICTED: NACHT, LRR and PYD domains-containing protein 14 [Danio
            rerio]
          Length = 1080

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 150/282 (53%), Gaps = 9/282 (3%)

Query: 201  GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
             +T         VL+S+ +LK LN+S N + D GVK LC  L +   +E L+LS  DL +
Sbjct: 772  NLTDRSCSVLASVLRSDTSLKELNMSNNNLQDSGVKLLCAGLKEKCDLELLRLSKCDLTE 831

Query: 261  EGAKAIAELLK-NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
            E   A+A +L+ ++S L+ L+L+NN +  SG   L++ L E S +  L L+         
Sbjct: 832  ESCSALALVLRSDSSSLKDLDLSNNNLQDSGVKRLSDVLKE-SKLEKLGLSKCDLTEESC 890

Query: 320  NALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            +ALA  L  +  SL++L L  N++ D G++ L   L  +  KL  L +    ++ +    
Sbjct: 891  SALASVLRSDSSSLKDLDLSNNNLQDSGVKLLSDEL--KDSKLEKLRLSKCDLTEESCSA 948

Query: 379  VAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  ++ +  SL  ++L  N++ D G ++++D LK ++ +  +   G +I  +G  A+A 
Sbjct: 949  LASVLRSDSSSLKDLDLSNNNLQDSGVKRLSDGLKDSK-LEILGFLGCSITEEGYKALAS 1007

Query: 438  VLKDN-SVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLK 477
             LK N S +  LDL  N  G  G K L+++L+  H  + TL+
Sbjct: 1008 ALKSNPSHLIELDLRGNDPGQSGVKELTDLLQDPHCTLKTLR 1049



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 33/252 (13%)

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
              + LA  L  + SL+EL++  N++ D G++ L +GL   K  L +L +    ++ +   
Sbjct: 777  SCSVLASVLRSDTSLKELNMSNNNLQDSGVKLLCAGLK-EKCDLELLRLSKCDLTEESCS 835

Query: 378  HVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             +A  ++ +  SL  ++L  N++ D G ++++D LK+++ +  + L   ++  +  SA+A
Sbjct: 836  ALALVLRSDSSSLKDLDLSNNNLQDSGVKRLSDVLKESK-LEKLGLSKCDLTEESCSALA 894

Query: 437  RVLK-DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
             VL+ D+S +  LDL+ N +   G K LS+ LK    +  L+L  C +       +A +L
Sbjct: 895  SVLRSDSSSLKDLDLSNNNLQDSGVKLLSDELK-DSKLEKLRLSKCDLTEESCSALASVL 953

Query: 496  RYNNT-ISILDLRANGLRD---------------------------EGAKCLAQSFKVVN 527
            R +++ +  LDL  N L+D                           EG K LA + K   
Sbjct: 954  RSDSSSLKDLDLSNNNLQDSGVKRLSDGLKDSKLEILGFLGCSITEEGYKALASALKSNP 1013

Query: 528  EALTSIDLAFNE 539
              L  +DL  N+
Sbjct: 1014 SHLIELDLRGND 1025



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 97/198 (48%), Gaps = 12/198 (6%)

Query: 392 INLY--MNDIGDEGAEKIADALKQNRTITTIDLG------GNNIHSKGASAIARVLKDNS 443
           INL+  +N++ D+   K   +     ++++ DL         N+  +  S +A VL+ ++
Sbjct: 730 INLFYCLNELNDQTLVKEIQSHLSKGSLSSADLSPAQWLNDCNLTDRSCSVLASVLRSDT 789

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NTIS 502
            +  L+++ N +   G K L   LK   ++  L+L  C +       +A +LR + +++ 
Sbjct: 790 SLKELNMSNNNLQDSGVKLLCAGLKEKCDLELLRLSKCDLTEESCSALALVLRSDSSSLK 849

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            LDL  N L+D G K L+   K     L  + L+  ++ ++   A+A  L+++   ++  
Sbjct: 850 DLDLSNNNLQDSGVKRLSDVLK--ESKLEKLGLSKCDLTEESCSALASVLRSDSS-SLKD 906

Query: 563 LNLANNFLTKFGQSALTD 580
           L+L+NN L   G   L+D
Sbjct: 907 LDLSNNNLQDSGVKLLSD 924



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 42/247 (17%)

Query: 340 NSIGDEG-IRALMSGLSSRKGKLAVLDIG------NNSISAKGAFHVAEYIKNCKSLLWI 392
           N + D+  ++ + S LS  KG L+  D+       + +++ +    +A  +++  SL  +
Sbjct: 737 NELNDQTLVKEIQSHLS--KGSLSSADLSPAQWLNDCNLTDRSCSVLASVLRSDTSLKEL 794

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLA 451
           N+  N++ D G + +   LK+   +  + L   ++  +  SA+A VL+ D+S +  LDL+
Sbjct: 795 NMSNNNLQDSGVKLLCAGLKEKCDLELLRLSKCDLTEESCSALALVLRSDSSSLKDLDLS 854

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N +   G K LS+VLK    +  L L  C +       +A +LR +++           
Sbjct: 855 NNNLQDSGVKRLSDVLK-ESKLEKLGLSKCDLTEESCSALASVLRSDSS----------- 902

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
                            +L  +DL+ N ++D G   ++  LK   D  +  L L+   LT
Sbjct: 903 -----------------SLKDLDLSNNNLQDSGVKLLSDELK---DSKLEKLRLSKCDLT 942

Query: 572 KFGQSAL 578
           +   SAL
Sbjct: 943 EESCSAL 949


>gi|390359220|ref|XP_784501.2| PREDICTED: leucine-rich repeat-containing protein 34-like
           [Strongylocentrotus purpuratus]
          Length = 411

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 121/225 (53%), Gaps = 12/225 (5%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N I+ KGA H+AE +K   +L  ++L  ND+G EG   IA+ L+ N T+  + L 
Sbjct: 86  LDMRYNQITDKGAEHIAELLKETCALKRLSLMCNDLGPEGGAIIANGLQLNETLQELKLN 145

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL----KLG 479
           GN I +KG  A+A VL+ N+ + SLDL           A + VL ++  +  L     L 
Sbjct: 146 GNKIGNKGGMALAGVLQVNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLL 205

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
           + Q   +   F A ML+ N+T++ L L+   ++D GA+ L++   V N  L  +DLA N+
Sbjct: 206 FSQQEETTIHF-AKMLKVNSTLTELHLQKCDIKDTGAERLSEML-VENIGLKYLDLACNK 263

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG----QSALTD 580
           IR DGA  +++ L  N  + V  L+L +N +   G      ALTD
Sbjct: 264 IRRDGAKYLSRVLMKNTPLEV--LDLGHNCIEDDGAMDLSRALTD 306



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 134/278 (48%), Gaps = 5/278 (1%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+   + DE    L  +L +N  V  L +    + D+GA+ IAELLK    L+ L L  N
Sbjct: 60  LTDKMLQDEDAYVLLKVLANNTYVTGLDMRYNQITDKGAEHIAELLKETCALKRLSLMCN 119

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +   G   +A  L  N T++ L LNGN  G  G  ALA  L+ N +L+ L L G++  D
Sbjct: 120 DLGPEGGAIIANGLQLNETLQELKLNGNKIGNKGGMALAGVLQVNTALQSLDL-GDTDQD 178

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
                  + + +    L  L +      S   +   H A+ +K   +L  ++L   DI D
Sbjct: 179 TQSMIAFTTVLNYNSTLKALCMNRPLLFSQQEETTIHFAKMLKVNSTLTELHLQKCDIKD 238

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GAE++++ L +N  +  +DL  N I   GA  ++RVL  N+ +  LDL +N I  DGA 
Sbjct: 239 TGAERLSEMLVENIGLKYLDLACNKIRRDGAKYLSRVLMKNTPLEVLDLGHNCIEDDGAM 298

Query: 462 ALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            LS  L   + N++TL +    I A G   +A  +  N
Sbjct: 299 DLSRALTDMNTNLHTLVITSNNIKAPGLCAIASAMENN 336



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 127/288 (44%), Gaps = 33/288 (11%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           VL +N  +  L++  N I D+G + + ++L +   ++RL L   DL  EG   IA  L+ 
Sbjct: 76  VLANNTYVTGLDMRYNQITDKGAEHIAELLKETCALKRLSLMCNDLGPEGGAIIANGLQL 135

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG---------------NYGGAL 317
           N  L+ L+LN N I   G  +LA  L  N+ ++SL L                 NY   L
Sbjct: 136 NETLQELKLNGNKIGNKGGMALAGVLQVNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTL 195

Query: 318 GANAL----------------AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            A  +                AK L+ N +L ELHL    I D G   L   L    G L
Sbjct: 196 KALCMNRPLLFSQQEETTIHFAKMLKVNSTLTELHLQKCDIKDTGAERLSEMLVENIG-L 254

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTI 420
             LD+  N I   GA +++  +     L  ++L  N I D+GA  ++ AL   N  + T+
Sbjct: 255 KYLDLACNKIRRDGAKYLSRVLMKNTPLEVLDLGHNCIEDDGAMDLSRALTDMNTNLHTL 314

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            +  NNI + G  AIA  +++N    S+ +  N    D   A   +++
Sbjct: 315 VITSNNIKAPGLCAIASAMENNPNFNSVFIWGNHHEEDACNAFHRLIE 362



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 6/306 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + +DM      D+G   +AE L      + +S   N +   G       LQ N  L+ L 
Sbjct: 84  TGLDMRYNQITDKGAEHIAELLKETCALKRLSLMCNDLGPEGGAIIANGLQLNETLQELK 143

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+GN IG++G   L  +L  N  ++ L L   D   +   A   +L  NS L+ L +N  
Sbjct: 144 LNGNKIGNKGGMALAGVLQVNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRP 203

Query: 285 MI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++           A+ L  NST+  LHL        GA  L++ L  N  L+ L L  N 
Sbjct: 204 LLFSQQEETTIHFAKMLKVNSTLTELHLQKCDIKDTGAERLSEMLVENIGLKYLDLACNK 263

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMNDIG 400
           I  +G + L S +  +   L VLD+G+N I   GA  ++  + +  + L  + +  N+I 
Sbjct: 264 IRRDGAKYL-SRVLMKNTPLEVLDLGHNCIEDDGAMDLSRALTDMNTNLHTLVITSNNIK 322

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             G   IA A++ N    ++ + GN+      +A  R+++  + +        P   DG 
Sbjct: 323 APGLCAIASAMENNPNFNSVFIWGNHHEEDACNAFHRLIEGGN-LEPEKTDVKPYVVDGQ 381

Query: 461 KALSEV 466
             LSE+
Sbjct: 382 VYLSEL 387



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 3/233 (1%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  KE  A   + +   + G EG   +A  L  N+T +E+    N I   G  A  GVLQ
Sbjct: 103 ELLKETCALKRLSLMCNDLGPEGGAIIANGLQLNETLQELKLNGNKIGNKGGMALAGVLQ 162

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKN 272
            N AL++L+L       + +     +L  N+ ++ L ++   L   ++E     A++LK 
Sbjct: 163 VNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLLFSQQEETTIHFAKMLKV 222

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           NS L  L L    I  +G   L+E L+EN  ++ L L  N     GA  L++ L  N  L
Sbjct: 223 NSTLTELHLQKCDIKDTGAERLSEMLVENIGLKYLDLACNKIRRDGAKYLSRVLMKNTPL 282

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
             L L  N I D+G   L   L+     L  L I +N+I A G   +A  ++N
Sbjct: 283 EVLDLGHNCIEDDGAMDLSRALTDMNTNLHTLVITSNNIKAPGLCAIASAMEN 335



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 141/308 (45%), Gaps = 12/308 (3%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           +QLS  D +D       E+  NN +L      + M+       L + L  N+ +  L + 
Sbjct: 38  VQLSKYDPKD---FMDMEMPGNNHLL-----TDKMLQDEDAYVLLKVLANNTYVTGLDMR 89

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N     GA  +A+ L+   +L+ L L  N +G EG   + +GL   +  L  L +  N 
Sbjct: 90  YNQITDKGAEHIAELLKETCALKRLSLMCNDLGPEGGAIIANGLQLNE-TLQELKLNGNK 148

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I  KG   +A  ++   +L  ++L   D   +        L  N T+  + +    + S+
Sbjct: 149 IGNKGGMALAGVLQVNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLLFSQ 208

Query: 431 GASA---IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
                   A++LK NS +T L L    I   GA+ LSE+L  +  +  L L   +I   G
Sbjct: 209 QEETTIHFAKMLKVNSTLTELHLQKCDIKDTGAERLSEMLVENIGLKYLDLACNKIRRDG 268

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
           A++++ +L  N  + +LDL  N + D+GA  L+++   +N  L ++ +  N I+  G  A
Sbjct: 269 AKYLSRVLMKNTPLEVLDLGHNCIEDDGAMDLSRALTDMNTNLHTLVITSNNIKAPGLCA 328

Query: 548 IAQALKAN 555
           IA A++ N
Sbjct: 329 IASAMENN 336



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 10/195 (5%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS------FAANGITAAGIKAFDGVLQS 216
           A  S+D+   +   + +      L YN T + +       F+    T      F  +L+ 
Sbjct: 166 ALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLLFSQQEETTI---HFAKMLKV 222

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L  L+L    I D G + L ++LV+N G++ L L+   +R +GAK ++ +L  N+ L
Sbjct: 223 NSTLTELHLQKCDIKDTGAERLSEMLVENIGLKYLDLACNKIRRDGAKYLSRVLMKNTPL 282

Query: 277 RVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            VL+L +N I+  G   L+ AL + N+ + +L +  N   A G  A+A  +E N +   +
Sbjct: 283 EVLDLGHNCIEDDGAMDLSRALTDMNTNLHTLVITSNNIKAPGLCAIASAMENNPNFNSV 342

Query: 336 HLHGNSIGDEGIRAL 350
            + GN   ++   A 
Sbjct: 343 FIWGNHHEEDACNAF 357


>gi|402908353|ref|XP_003916914.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Papio anubis]
          Length = 1044

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 5/244 (2%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L   +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 779  GPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 834

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 835  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGARV 894

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 895  LAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 954

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            L  N  +  L L  N L+DEG  CLA+  K  N +L  + L+ N I   GA A+ QAL+ 
Sbjct: 955  LAKNVMLEELCLEENHLQDEGVCCLAEGLK-RNSSLKILKLSNNCITYLGAEALLQALEK 1013

Query: 555  NEDV 558
            N+ +
Sbjct: 1014 NDTI 1017



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 133/262 (50%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 768  VGHLKLTFCSVGPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 824

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 825  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 883

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 884  NNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 943

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G   L+E LK + ++  LKL    I   G
Sbjct: 944  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNNCITYLG 1003

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            AE +   L  N+TI  + LR N
Sbjct: 1004 AEALLQALEKNDTILEVWLRGN 1025



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 127/278 (45%), Gaps = 8/278 (2%)

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
            G N    +++F + G       AF  VL+       L L  N +GD GV+ L   L    
Sbjct: 765  GLNVGHLKLTFCSVGPAECAALAF--VLRHLRQPVALQLDYNSVGDIGVEQLLPCL---- 818

Query: 247  GVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
            GV + L L   ++ D G   + E   +   L+ L L NN +      S+A+ L       
Sbjct: 819  GVCKALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFL 878

Query: 306  SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            +L L  N+  A GA  LA+GL GN SL+ L   GN +GDEG +AL   L   +  L  L 
Sbjct: 879  ALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQS-LRWLS 937

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +  N+I + GA  +A  +     L  + L  N + DEG   +A+ LK+N ++  + L  N
Sbjct: 938  LVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNN 997

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             I   GA A+ + L+ N  I  + L  N    + A  L
Sbjct: 998  CITYLGAEALLQALEKNDTILEVWLRGNIFSLEEADKL 1035



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 83/159 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 867  MAKLLACRQNFLALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEA 926

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G   LAE L  N
Sbjct: 927  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRN 986

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN
Sbjct: 987  SSLKILKLSNNCITYLGAEALLQALEKNDTILEVWLRGN 1025



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 88/174 (50%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F ++ +   +    G   LAE L  N + + + F 
Sbjct: 852  LALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGARVLAEGLRGNASLQFLGFW 911

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A    L  + +L+ L+L GN IG  G + L  +L  N  +E L L    L
Sbjct: 912  GNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHL 971

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            +DEG   +AE LK NS L++L+L+NN I Y G  +L +AL +N TI  + L GN
Sbjct: 972  QDEGVCCLAEGLKRNSSLKILKLSNNCITYLGAEALLQALEKNDTILEVWLRGN 1025



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 87/196 (44%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 830  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 889

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  NA ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 890  AGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 949

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA  L +N  +  L L  N+    G   LA+GL+ N SL+ L L  N I   G  AL+ 
Sbjct: 950  ALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNNCITYLGAEALLQ 1009

Query: 353  GLSSRKGKLAVLDIGN 368
             L      L V   GN
Sbjct: 1010 ALEKNDTILEVWLRGN 1025


>gi|388502958|gb|AFK39545.1| unknown [Medicago truncatula]
          Length = 484

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 168/360 (46%), Gaps = 38/360 (10%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESL-GYNQTAEEVS---FAANGITAAGIKA---FDGVLQ 215
           +F+++  S R+FG +    +   L       +EV    F A    A  I+    F   L+
Sbjct: 153 SFTNICFSNRSFGLDAAHVVEPMLISIKDQLKEVDLSDFIAGRPEAEAIEVMNIFSSALE 212

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
             + L+ LNLS N +G++GV+    +L     +E L L +  + +E AKA+AEL+     
Sbjct: 213 GAV-LRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPFTEK 271

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+VL  +NNM    G  ++A+ +  +  +     +    GA G  ALA+ L     L++L
Sbjct: 272 LKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKL 331

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N  G E   AL                             ++ I     L  I L 
Sbjct: 332 DLRDNMFGVEAGVAL-----------------------------SKVIPVFADLTEIYLS 362

Query: 396 MNDIGDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             ++ D+GAE +A+ALK++  ++  +D+ GN+I +K A ++A  +     +T L+L+ N 
Sbjct: 363 YLNLEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENE 422

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +  +GA  +S+ L+  G ++ + L    I  SGA+ +A+ +       +L++ AN + DE
Sbjct: 423 LKDEGAGLISKALEGLGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNVNANFISDE 482



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 140/263 (53%), Gaps = 6/263 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG   LR L+L  N++G++G+RA  + L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSSALEG-AVLRHLNLSNNAMGEKGVRAFRALLKSQ-NDLEELYLMNDGISEEAAKAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE I   + L  ++ + N  GDEGA  IAD +K++  +         + ++G  A+A  L
Sbjct: 263 AELIPFTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              + +  LDL  N  G +   ALS+V+    ++  + L +  +   GAE +A+ L+ + 
Sbjct: 323 GACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKESA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++ ILD+  N +  + A  +A+      + LT ++L+ NE++D+GA  I++AL+     
Sbjct: 383 PSLEILDMAGNDITAKTAVSVAECIS-SKQFLTKLNLSENELKDEGAGLISKALEGLGQ- 440

Query: 559 AVTSLNLANNFLTKFGQSALTDA 581
            ++ ++L+ N +T  G   L +A
Sbjct: 441 -LSEVDLSTNLITWSGAKLLAEA 462


>gi|326428256|gb|EGD73826.1| hypothetical protein PTSG_05519 [Salpingoeca sp. ATCC 50818]
          Length = 380

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 147/308 (47%), Gaps = 27/308 (8%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           IT A +      L+SN ++  L+LS N I D G   +  +L  N  +  L L   D+ + 
Sbjct: 51  ITDAALGPICEALKSNSSVFYLDLSYNRITDAGAATISRLLETNHSIISLSLDCNDITER 110

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA  I+++L+ NS L++L L  N I  +G  SLA  L  N T+ SL +           A
Sbjct: 111 GADTISKMLQVNSALKILSLRGNKIGRAGNLSLASVLQVNQTLESLDVGETDADCSAVIA 170

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            A  L GN +L+ L+L            L+S     +G +                H+AE
Sbjct: 171 YAAALAGNTALKSLNLD----------RLVSFTQQEEGTV----------------HIAE 204

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            +K   +L  +++  + + D G  ++  ALK N T+ T+DL  N I   GA+ + RVL+ 
Sbjct: 205 MLKQNTTLTSLSMQKHGMTDFGVGRLCQALKDNATLATLDLSCNKITRDGAAELGRVLQT 264

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ + SL L  N +  +GA  L + +    NI+ L L + ++ A G   VAD +R ++ +
Sbjct: 265 NTSLRSLQLNNNSLEDEGASILMKAV-VGTNIDALGLAYNRLCAEGVHAVADGIRAHSRL 323

Query: 502 SILDLRAN 509
           + L L  N
Sbjct: 324 TRLSLWGN 331



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 34/248 (13%)

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
           ++GN  I+      + E +K+  S+ +++L  N I D GA  I+  L+ N +I ++ L  
Sbjct: 45  ELGNICITDAALGPICEALKSNSSVFYLDLSYNRITDAGAATISRLLETNHSIISLSLDC 104

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N+I  +GA  I+++L+ NS +  L L  N IG  G  +L+ VL+ +  + +L +G     
Sbjct: 105 NDITERGADTISKMLQVNSALKILSLRGNKIGRAGNLSLASVLQVNQTLESLDVGETDAD 164

Query: 485 AS-------------------------------GAEFVADMLRYNNTISILDLRANGLRD 513
            S                               G   +A+ML+ N T++ L ++ +G+ D
Sbjct: 165 CSAVIAYAAALAGNTALKSLNLDRLVSFTQQEEGTVHIAEMLKQNTTLTSLSMQKHGMTD 224

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
            G   L Q+ K  N  L ++DL+ N+I  DGA  + + L+ N   ++ SL L NN L   
Sbjct: 225 FGVGRLCQALKD-NATLATLDLSCNKITRDGAAELGRVLQTN--TSLRSLQLNNNSLEDE 281

Query: 574 GQSALTDA 581
           G S L  A
Sbjct: 282 GASILMKA 289



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 129/294 (43%), Gaps = 39/294 (13%)

Query: 154 LNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           L    + L++ SSV   D+S     D G   ++  L  N +   +S   N IT  G    
Sbjct: 56  LGPICEALKSNSSVFYLDLSYNRITDAGAATISRLLETNHSIISLSLDCNDITERGADTI 115

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL------------ 258
             +LQ N ALK L+L GN IG  G   L  +L  N  +E L +   D             
Sbjct: 116 SKMLQVNSALKILSLRGNKIGRAGNLSLASVLQVNQTLESLDVGETDADCSAVIAYAAAL 175

Query: 259 -------------------RDEGAKAIAELLKNNSILRVLELNNN-MIDYSGFTSLAEAL 298
                              ++EG   IAE+LK N+ L  L +  + M D+ G   L +AL
Sbjct: 176 AGNTALKSLNLDRLVSFTQQEEGTVHIAEMLKQNTTLTSLSMQKHGMTDF-GVGRLCQAL 234

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
            +N+T+ +L L+ N     GA  L + L+ N SLR L L+ NS+ DEG   LM  +    
Sbjct: 235 KDNATLATLDLSCNKITRDGAAELGRVLQTNTSLRSLQLNNNSLEDEGASILMKAVVGT- 293

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
             +  L +  N + A+G   VA+ I+    L  ++L+ N  G  G    ADA +
Sbjct: 294 -NIDALGLAYNRLCAEGVHAVADGIRAHSRLTRLSLWGNP-GLAGTTADADACR 345


>gi|327260169|ref|XP_003214908.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3-like
           [Anolis carolinensis]
          Length = 843

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 4/282 (1%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLR 259
           G+ AAG + F  VL  +  L+ L L  N +GD GVK LC+ L      +E L L++ +L 
Sbjct: 535 GLNAAGCQHFIPVLSISQTLRKLTLESNKLGDVGVKLLCEGLKHPQCQLETLSLATCELS 594

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALG 318
                 ++ +L  +  LR LEL  N ++ +G   L E L +    +  L L      A  
Sbjct: 595 PACCGDLSSVLSISQTLRELELEYNKLEDTGLRLLCEGLKQPQCKLEKLGLFTCDLTAAC 654

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              LA  L  N++L +L L GN +GD G++ L  GL   + K+  L + +  I+A G   
Sbjct: 655 TKDLASILCCNQTLAQLFLGGNMLGDSGLKQLCEGLKHSQCKIKKLCLCDTGITAAGCME 714

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIAR 437
           ++  +   ++L  I+L+ N + D G   + + LK  +  +  + + G    S     +  
Sbjct: 715 LSSVLSTSQALEDIDLWQNTLEDSGLRLLCEGLKHPDCKLEVLSMWGCKFTSASCGDLQC 774

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           VL  N  +  L L  N +G  G   L E LK H N     +G
Sbjct: 775 VLSTNQNLKKLQLENNKLGDSGVLLLCEGLK-HPNCKLKSIG 815



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 3/255 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           +    + +     GD G+  L E L + Q   E +S A   ++ A       VL  +  L
Sbjct: 552 QTLRKLTLESNKLGDVGVKLLCEGLKHPQCQLETLSLATCELSPACCGDLSSVLSISQTL 611

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           + L L  N + D G++ LC+ L      +E+L L + DL     K +A +L  N  L  L
Sbjct: 612 RELELEYNKLEDTGLRLLCEGLKQPQCKLEKLGLFTCDLTAACTKDLASILCCNQTLAQL 671

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L  NM+  SG   L E L  +   I+ L L      A G   L+  L  +++L ++ L 
Sbjct: 672 FLGGNMLGDSGLKQLCEGLKHSQCKIKKLCLCDTGITAAGCMELSSVLSTSQALEDIDLW 731

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N++ D G+R L  GL     KL VL +     ++     +   +   ++L  + L  N 
Sbjct: 732 QNTLEDSGLRLLCEGLKHPDCKLEVLSMWGCKFTSASCGDLQCVLSTNQNLKKLQLENNK 791

Query: 399 IGDEGAEKIADALKQ 413
           +GD G   + + LK 
Sbjct: 792 LGDSGVLLLCEGLKH 806



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 122/295 (41%), Gaps = 31/295 (10%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG----------- 328
           +L+   ++ +G       L  + T+R L L  N  G +G   L +GL+            
Sbjct: 530 QLDECGLNAAGCQHFIPVLSISQTLRKLTLESNKLGDVGVKLLCEGLKHPQCQLETLSLA 589

Query: 329 ------------------NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                             +++LREL L  N + D G+R L  GL   + KL  L +    
Sbjct: 590 TCELSPACCGDLSSVLSISQTLRELELEYNKLEDTGLRLLCEGLKQPQCKLEKLGLFTCD 649

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHS 429
           ++A     +A  +   ++L  + L  N +GD G +++ + LK ++  I  + L    I +
Sbjct: 650 LTAACTKDLASILCCNQTLAQLFLGGNMLGDSGLKQLCEGLKHSQCKIKKLCLCDTGITA 709

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGA 488
            G   ++ VL  +  +  +DL  N +   G + L E LK     +  L +  C+  ++  
Sbjct: 710 AGCMELSSVLSTSQALEDIDLWQNTLEDSGLRLLCEGLKHPDCKLEVLSMWGCKFTSASC 769

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             +  +L  N  +  L L  N L D G   L +  K  N  L SI L   E+ +D
Sbjct: 770 GDLQCVLSTNQNLKKLQLENNKLGDSGVLLLCEGLKHPNCKLKSIGLDIEELSED 824



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 12/238 (5%)

Query: 298 LLENSTIRSLHLNGNYGGAL--------GANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           LLE      L    NY   L        G       L  +++LR+L L  N +GD G++ 
Sbjct: 512 LLEECETEVLQRLPNYPDQLDECGLNAAGCQHFIPVLSISQTLRKLTLESNKLGDVGVKL 571

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L  GL   + +L  L +    +S      ++  +   ++L  + L  N + D G   + +
Sbjct: 572 LCEGLKHPQCQLETLSLATCELSPACCGDLSSVLSISQTLRELELEYNKLEDTGLRLLCE 631

Query: 410 ALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            LKQ +  +  + L   ++ +     +A +L  N  +  L L  N +G  G K L E LK
Sbjct: 632 GLKQPQCKLEKLGLFTCDLTAACTKDLASILCCNQTLAQLFLGGNMLGDSGLKQLCEGLK 691

Query: 469 FHGNINTLKLGWCQIG--ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
            H      KL  C  G  A+G   ++ +L  +  +  +DL  N L D G + L +  K
Sbjct: 692 -HSQCKIKKLCLCDTGITAAGCMELSSVLSTSQALEDIDLWQNTLEDSGLRLLCEGLK 748



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 101/235 (42%), Gaps = 4/235 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
           +    +++      D GL  L E L   Q   E++      +TAA  K    +L  N  L
Sbjct: 609 QTLRELELEYNKLEDTGLRLLCEGLKQPQCKLEKLGLFTCDLTAACTKDLASILCCNQTL 668

Query: 221 KTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L L GN +GD G+K LC+ L      +++L L    +   G   ++ +L  +  L  +
Sbjct: 669 AQLFLGGNMLGDSGLKQLCEGLKHSQCKIKKLCLCDTGITAAGCMELSSVLSTSQALEDI 728

Query: 280 ELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           +L  N ++ SG   L E L   +  +  L + G    +     L   L  N++L++L L 
Sbjct: 729 DLWQNTLEDSGLRLLCEGLKHPDCKLEVLSMWGCKFTSASCGDLQCVLSTNQNLKKLQLE 788

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            N +GD G+  L  GL     KL  + +    +S      + +Y+K  K  L I+
Sbjct: 789 NNKLGDSGVLLLCEGLKHPNCKLKSIGLDIEELSEDTVREL-KYLKRMKPRLTID 842



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 4/212 (1%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHS 429
           ++A G  H    +   ++L  + L  N +GD G + + + LK  +  + T+ L    +  
Sbjct: 536 LNAAGCQHFIPVLSISQTLRKLTLESNKLGDVGVKLLCEGLKHPQCQLETLSLATCELSP 595

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGA 488
                ++ VL  +  +  L+L YN +   G + L E LK     +  L L  C + A+  
Sbjct: 596 ACCGDLSSVLSISQTLRELELEYNKLEDTGLRLLCEGLKQPQCKLEKLGLFTCDLTAACT 655

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           + +A +L  N T++ L L  N L D G K L +  K     +  + L    I   G   +
Sbjct: 656 KDLASILCCNQTLAQLFLGGNMLGDSGLKQLCEGLKHSQCKIKKLCLCDTGITAAGCMEL 715

Query: 549 AQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           +  L  ++  A+  ++L  N L   G   L +
Sbjct: 716 SSVLSTSQ--ALEDIDLWQNTLEDSGLRLLCE 745


>gi|443719206|gb|ELU09480.1| hypothetical protein CAPTEDRAFT_200350 [Capitella teleta]
          Length = 539

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 143/301 (47%), Gaps = 33/301 (10%)

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +D     ++  AL  N  + SL ++ N  G +G   +A  +  N+ +R L L  N IG  
Sbjct: 103 MDKRDALAICSALQGNIEVVSLIVDDNNLGWIGVGYVALMMCENEVIRTLGLAKNQIGKR 162

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G R +M  L      L+ LDI  N I       +A+ IK+ ++L ++NL  N+I D+GA+
Sbjct: 163 GCRVVMEMLLENH-VLSSLDISGNQIDDNDMEFIAKIIKDNRNLTYLNLSHNNISDKGAK 221

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +  A+  N T+ ++DL  N I  +G  AI+  L +N V++S+ LAYN +   GA+A+ E
Sbjct: 222 FLQPAIADNETLRSLDLSWNKIRPRGGVAISEGLAENVVMSSISLAYNGLCITGARAMGE 281

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+                             N  ++ LDL  N + DEG   +A++   
Sbjct: 282 CLQI----------------------------NEILTDLDLTCNRMFDEGVAFIAKALS- 312

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
            NE L  + ++ N +       +   ++ N + A+  L+++N  + K    AL  A ++V
Sbjct: 313 TNENLQKLRISNNAMTTASVITVLTTIQENPESAIVLLDMSNMHIYK---EALGLANEIV 369

Query: 586 Y 586
           +
Sbjct: 370 F 370



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 1/212 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N G  G+ ++A  +  N+    +  A N I   G +    +L  N  L +L++SGN I D
Sbjct: 130 NLGWIGVGYVALMMCENEVIRTLGLAKNQIGKRGCRVVMEMLLENHVLSSLDISGNQIDD 189

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             ++ +  I+ DN  +  L LS  ++ D+GAK +   + +N  LR L+L+ N I   G  
Sbjct: 190 NDMEFIAKIIKDNRNLTYLNLSHNNISDKGAKFLQPAIADNETLRSLDLSWNKIRPRGGV 249

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +++E L EN  + S+ L  N     GA A+ + L+ N+ L +L L  N + DEG+  +  
Sbjct: 250 AISEGLAENVVMSSISLAYNGLCITGARAMGECLQINEILTDLDLTCNRMFDEGVAFIAK 309

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            LS+ +  L  L I NN+++      V   I+
Sbjct: 310 ALSTNEN-LQKLRISNNAMTTASVITVLTTIQ 340



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 115/244 (47%), Gaps = 1/244 (0%)

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           G ++  ++ K + + G  +       +C  L  N  V  L +   +L   G   +A ++ 
Sbjct: 85  GAVRKGLSKKEIRVKGRGMDKRDALAICSALQGNIEVVSLIVDDNNLGWIGVGYVALMMC 144

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N ++R L L  N I   G   + E LLEN  + SL ++GN         +AK ++ N++
Sbjct: 145 ENEVIRTLGLAKNQIGKRGCRVVMEMLLENHVLSSLDISGNQIDDNDMEFIAKIIKDNRN 204

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L  L+L  N+I D+G + L   ++  +  L  LD+  N I  +G   ++E +     +  
Sbjct: 205 LTYLNLSHNNISDKGAKFLQPAIADNE-TLRSLDLSWNKIRPRGGVAISEGLAENVVMSS 263

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           I+L  N +   GA  + + L+ N  +T +DL  N +  +G + IA+ L  N  +  L ++
Sbjct: 264 ISLAYNGLCITGARAMGECLQINEILTDLDLTCNRMFDEGVAFIAKALSTNENLQKLRIS 323

Query: 452 YNPI 455
            N +
Sbjct: 324 NNAM 327



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 31/241 (12%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           ++  N  ++TL L+ N IG  G + + ++L++N  +  L +S   + D   + IA+++K+
Sbjct: 142 MMCENEVIRTLGLAKNQIGKRGCRVVMEMLLENHVLSSLDISGNQIDDNDMEFIAKIIKD 201

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N  L  L L++N I   G   L  A+ +N T+RSL L+ N     G  A+++GL  N   
Sbjct: 202 NRNLTYLNLSHNNISDKGAKFLQPAIADNETLRSLDLSWNKIRPRGGVAISEGLAEN--- 258

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
                            +MS +S          +  N +   GA  + E ++  + L  +
Sbjct: 259 ----------------VVMSSIS----------LAYNGLCITGARAMGECLQINEILTDL 292

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDL 450
           +L  N + DEG   IA AL  N  +  + +  N + +     +   +++N  S I  LD+
Sbjct: 293 DLTCNRMFDEGVAFIAKALSTNENLQKLRISNNAMTTASVITVLTTIQENPESAIVLLDM 352

Query: 451 A 451
           +
Sbjct: 353 S 353



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 1/213 (0%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E     ++ ++    G  G   + E L  N     +  + N I    ++    +++ N  
Sbjct: 145 ENEVIRTLGLAKNQIGKRGCRVVMEMLLENHVLSSLDISGNQIDDNDMEFIAKIIKDNRN 204

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  LNLS N I D+G K L   + DN  +  L LS   +R  G  AI+E L  N ++  +
Sbjct: 205 LTYLNLSHNNISDKGAKFLQPAIADNETLRSLDLSWNKIRPRGGVAISEGLAENVVMSSI 264

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L  N +  +G  ++ E L  N  +  L L  N     G   +AK L  N++L++L +  
Sbjct: 265 SLAYNGLCITGARAMGECLQINEILTDLDLTCNRMFDEGVAFIAKALSTNENLQKLRISN 324

Query: 340 NSIGDEGIRALMSGLSSR-KGKLAVLDIGNNSI 371
           N++    +  +++ +    +  + +LD+ N  I
Sbjct: 325 NAMTTASVITVLTTIQENPESAIVLLDMSNMHI 357



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 45/243 (18%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD  + + +   A+ +  Y++ C+ +      +N +G         A+++  +   I + 
Sbjct: 54  LDGEDRATTPYDAYGLRTYMRACRKM-----KINPVG---------AVRKGLSKKEIRVK 99

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           G  +  + A AI   L+ N  + SL +  N +G  G   ++ ++  +  I TL L   QI
Sbjct: 100 GRGMDKRDALAICSALQGNIEVVSLIVDDNNLGWIGVGYVALMMCENEVIRTLGLAKNQI 159

Query: 484 GASGAEFVADMLRYNNTISILD----------------------------LRANGLRDEG 515
           G  G   V +ML  N+ +S LD                            L  N + D+G
Sbjct: 160 GKRGCRVVMEMLLENHVLSSLDISGNQIDDNDMEFIAKIIKDNRNLTYLNLSHNNISDKG 219

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
           AK L Q     NE L S+DL++N+IR  G  AI++ L   E+V ++S++LA N L   G 
Sbjct: 220 AKFL-QPAIADNETLRSLDLSWNKIRPRGGVAISEGLA--ENVVMSSISLAYNGLCITGA 276

Query: 576 SAL 578
            A+
Sbjct: 277 RAM 279



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 77/157 (49%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E   E    SS+D+SG    D  + F+A+ +  N+    ++ + N I+  G K     + 
Sbjct: 169 EMLLENHVLSSLDISGNQIDDNDMEFIAKIIKDNRNLTYLNLSHNNISDKGAKFLQPAIA 228

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N  L++L+LS N I   G   + + L +N  +  + L+   L   GA+A+ E L+ N I
Sbjct: 229 DNETLRSLDLSWNKIRPRGGVAISEGLAENVVMSSISLAYNGLCITGARAMGECLQINEI 288

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L  L+L  N +   G   +A+AL  N  ++ L ++ N
Sbjct: 289 LTDLDLTCNRMFDEGVAFIAKALSTNENLQKLRISNN 325



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 69/143 (48%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K+ R  + +++S  N  D+G  FL  ++  N+T   +  + N I   G  A    L  N+
Sbjct: 200 KDNRNLTYLNLSHNNISDKGAKFLQPAIADNETLRSLDLSWNKIRPRGGVAISEGLAENV 259

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            + +++L+ N +   G + + + L  N  +  L L+   + DEG   IA+ L  N  L+ 
Sbjct: 260 VMSSISLAYNGLCITGARAMGECLQINEILTDLDLTCNRMFDEGVAFIAKALSTNENLQK 319

Query: 279 LELNNNMIDYSGFTSLAEALLEN 301
           L ++NN +  +   ++   + EN
Sbjct: 320 LRISNNAMTTASVITVLTTIQEN 342


>gi|290994540|ref|XP_002679890.1| predicted protein [Naegleria gruberi]
 gi|284093508|gb|EFC47146.1| predicted protein [Naegleria gruberi]
          Length = 293

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 154/289 (53%), Gaps = 42/289 (14%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           EG K I+E+ +    L  L++++N I   G    A+ + E   + SL++  N  G  GA 
Sbjct: 17  EGGKFISEIKQ----LTSLDISDNQIGVEG----AKLISEMKQLTSLNIFKNGIGVEGAK 68

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            +++     K L  L + GN I DEG++++     S   +L  LDI  N I  +GA    
Sbjct: 69  LISE----MKQLTSLDISGNLIYDEGVKSI-----SEMKQLTSLDISKNEIGVEGA---- 115

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + I   K L  +N+  N+I DEGA+ I++     + +T++ +  + I  KGA  ++ + +
Sbjct: 116 KLISGMKQLTSLNISKNEISDEGAKLISEM----KQLTSLTIYKSGIDDKGAKYLSEIKQ 171

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
               +TSLD++ NP+G +GAK +SE+      + +L +    I   GAEF++ M +  + 
Sbjct: 172 ----LTSLDISSNPMGVEGAKFISEM----KQLTSLDISNNLIYDEGAEFISGMKQLTS- 222

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
              L++  N + DEGAK +++      + LTS+D+ +NEI D+GA  I+
Sbjct: 223 ---LNISNNIILDEGAKLISEM-----KQLTSLDICYNEIGDEGAKFIS 263



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 50/274 (18%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K L  L +  N IG EG + +     S   +L  LDI +N I  +GA  ++E     K L
Sbjct: 2   KQLTSLSIGVNEIGVEGGKFI-----SEIKQLTSLDISDNQIGVEGAKLISE----MKQL 52

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             +N++ N IG EGA+ I++     + +T++D+ GN I+ +G  +I+ + +    +TSLD
Sbjct: 53  TSLNIFKNGIGVEGAKLISEM----KQLTSLDISGNLIYDEGVKSISEMKQ----LTSLD 104

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           ++ N IG +GAK +S +      + +L +   +I   GA+ +++M +  +    L +  +
Sbjct: 105 ISKNEIGVEGAKLISGM----KQLTSLNISKNEISDEGAKLISEMKQLTS----LTIYKS 156

Query: 510 GLRDEGAKCLAQ-----------------SFKVVNE--ALTSIDLAFNEIRDDGAFAIAQ 550
           G+ D+GAK L++                   K ++E   LTS+D++ N I D+GA  I+ 
Sbjct: 157 GIDDKGAKYLSEIKQLTSLDISSNPMGVEGAKFISEMKQLTSLDISNNLIYDEGAEFIS- 215

Query: 551 ALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
            +K      +TSLN++NN +   G   +++ K L
Sbjct: 216 GMKQ-----LTSLNISNNIILDEGAKLISEMKQL 244



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 138/295 (46%), Gaps = 63/295 (21%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           +S   N I   G K    + Q    L +L++S N IG EG K +          E  QL+
Sbjct: 7   LSIGVNEIGVEGGKFISEIKQ----LTSLDISDNQIGVEGAKLIS---------EMKQLT 53

Query: 255 SVDLRD-----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           S+++       EGAK I+E+ +    L  L+++ N+I   G  S++E       + SL +
Sbjct: 54  SLNIFKNGIGVEGAKLISEMKQ----LTSLDISGNLIYDEGVKSISEM----KQLTSLDI 105

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N  G  GA  ++    G K L  L++  N I DEG +     L S   +L  L I  +
Sbjct: 106 SKNEIGVEGAKLIS----GMKQLTSLNISKNEISDEGAK-----LISEMKQLTSLTIYKS 156

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            I  KGA    +Y+   K L  +++  N +G EGA+ I++     + +T++D+  N I+ 
Sbjct: 157 GIDDKGA----KYLSEIKQLTSLDISSNPMGVEGAKFISEM----KQLTSLDISNNLIYD 208

Query: 430 KGASAI--------------------ARVLKDNSVITSLDLAYNPIGADGAKALS 464
           +GA  I                    A+++ +   +TSLD+ YN IG +GAK +S
Sbjct: 209 EGAEFISGMKQLTSLNISNNIILDEGAKLISEMKQLTSLDICYNEIGDEGAKFIS 263



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 124/271 (45%), Gaps = 46/271 (16%)

Query: 145 KLFRESKQ--TLNEFA-----------KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT 191
           KL  E KQ  +LN F             E++  +S+D+SG    DEG+  ++E     + 
Sbjct: 44  KLISEMKQLTSLNIFKNGIGVEGAKLISEMKQLTSLDISGNLIYDEGVKSISEM----KQ 99

Query: 192 AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
              +  + N I   G K   G+ Q    L +LN+S N I DEG K + ++      +  L
Sbjct: 100 LTSLDISKNEIGVEGAKLISGMKQ----LTSLNISKNEISDEGAKLISEM----KQLTSL 151

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
            +    + D+GAK ++E+ +    L  L++++N +   G    A+ + E   + SL ++ 
Sbjct: 152 TIYKSGIDDKGAKYLSEIKQ----LTSLDISSNPMGVEG----AKFISEMKQLTSLDISN 203

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N     GA  ++    G K L  L++  N I DEG +     L S   +L  LDI  N I
Sbjct: 204 NLIYDEGAEFIS----GMKQLTSLNISNNIILDEGAK-----LISEMKQLTSLDICYNEI 254

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
             +G    A++I   K L  + +Y N I DE
Sbjct: 255 GDEG----AKFISGMKQLTSLYVYANRISDE 281


>gi|189501941|ref|YP_001957658.1| hypothetical protein Aasi_0526 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497382|gb|ACE05929.1| hypothetical protein Aasi_0526 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 372

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 144/268 (53%), Gaps = 11/268 (4%)

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           +  + L +N I   G    A AL + + + +++L  N  GA GA A AK L+G   +  +
Sbjct: 100 VHTINLRDNQIGAHGAVEFAHAL-QGTHVHTVNLGINEIGARGAIAFAKHLQGT-CVHTV 157

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           HL  N IGD+G+      L      +  + +G N I A+G     ++++  +    ++L 
Sbjct: 158 HLIYNQIGDQGVEGFAKHLQGTC--VHTVYLGENEIGAQGIEAFTKHLQGTQVHT-VDLD 214

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N+IG +GAE  A  L Q   +  I+L GN I ++GA A+A+ L+   V T +DL++N I
Sbjct: 215 TNEIGIQGAEGFARLL-QGTNVQKINLSGNQIGAQGAEALAKQLQGTRVHT-VDLSWNRI 272

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G  GA+AL++ L+    ++T+ L W QIG  GA   A  L+     ++ +LR+N +  +G
Sbjct: 273 GDQGAEALAKHLQG-TRVHTVNLSWNQIGGQGAIEFAKHLQGAQAHTV-NLRSNQIGAQG 330

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           A+  A+  +  N  + +++L+ N+I  D
Sbjct: 331 AEGFARLLQGTN--VHTVELSENQIGPD 356



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 10/265 (3%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +  ++++     G  G    A +L        V+   N I A G  AF   LQ    + T
Sbjct: 99  SVHTINLRDNQIGAHGAVEFAHAL-QGTHVHTVNLGINEIGARGAIAFAKHLQGT-CVHT 156

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           ++L  N IGD+GV+     L     V  + L   ++  +G +A  + L+   +   ++L+
Sbjct: 157 VHLIYNQIGDQGVEGFAKHL-QGTCVHTVYLGENEIGAQGIEAFTKHLQGTQV-HTVDLD 214

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I   G    A  LL+ + ++ ++L+GN  GA GA ALAK L+G + +  + L  N I
Sbjct: 215 TNEIGIQGAEGFAR-LLQGTNVQKINLSGNQIGAQGAEALAKQLQGTR-VHTVDLSWNRI 272

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD+G  AL   L     ++  +++  N I  +GA   A++++  ++   +NL  N IG +
Sbjct: 273 GDQGAEALAKHLQGT--RVHTVNLSWNQIGGQGAIEFAKHLQGAQAHT-VNLRSNQIGAQ 329

Query: 403 GAEKIADALKQNRTITTIDLGGNNI 427
           GAE  A  L Q   + T++L  N I
Sbjct: 330 GAEGFARLL-QGTNVHTVELSENQI 353



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 43/255 (16%)

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSL 389
           S+  ++L  N IG  G       L      +  +++G N I A+GA   A++++  C   
Sbjct: 99  SVHTINLRDNQIGAHGAVEFAHALQGTH--VHTVNLGINEIGARGAIAFAKHLQGTCVHT 156

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             ++L  N IGD+G E  A  L Q   + T+ LG N I ++G  A  + L+   V T +D
Sbjct: 157 --VHLIYNQIGDQGVEGFAKHL-QGTCVHTVYLGENEIGAQGIEAFTKHLQGTQVHT-VD 212

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           L  N IG  GA+  + +L+   N+  + L   QIGA GAE +A  L+             
Sbjct: 213 LDTNEIGIQGAEGFARLLQG-TNVQKINLSGNQIGAQGAEALAKQLQ------------- 258

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
           G R                 + ++DL++N I D GA A+A+ L+      V ++NL+ N 
Sbjct: 259 GTR-----------------VHTVDLSWNRIGDQGAEALAKHLQGTR---VHTVNLSWNQ 298

Query: 570 LTKFGQSALTDAKDL 584
           +   GQ A+  AK L
Sbjct: 299 IG--GQGAIEFAKHL 311


>gi|296434572|sp|Q8IZ02.2|LRC34_HUMAN RecName: Full=Leucine-rich repeat-containing protein 34
 gi|119598948|gb|EAW78542.1| leucine rich repeat containing 34, isoform CRA_f [Homo sapiens]
          Length = 419

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+G N +   GA++ A+ ++   +L+++NL  NDIG EG E IA  L +NRT+  + + 
Sbjct: 115 LDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMT 174

Query: 424 GNNIHSKG---------------------------ASAIARVLKDNSVITSLDLAYNPIG 456
           GN I +KG                              + R+LK+N  + +L +  + I 
Sbjct: 175 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLEESTVHVGRMLKENHCLVALHMCKHDIK 234

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G + L + L  + ++  L +   +I   G  ++AD+L+ N T+ ++DL  N + + GA
Sbjct: 235 NSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGA 294

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             L+++    N +L ++ +  N I  +G  A++Q++K N
Sbjct: 295 NYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTN 333



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 123/269 (45%), Gaps = 3/269 (1%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +T         +L++ + +  L++  N + D G      +L     +  L L   D+  E
Sbjct: 94  VTGEDFWILSKILKNCLYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPE 153

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G + IA++L  N  L+ L +  N I+  G    A  L  NS++  L L G+         
Sbjct: 154 GGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDL-GDCDLEESTVH 212

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           + + L+ N  L  LH+  + I + GI+ L   L      L  LD+  N I+  G  ++A+
Sbjct: 213 VGRMLKENHCLVALHMCKHDIKNSGIQQLCDALY-LNSSLRYLDVSCNKITHDGMVYLAD 271

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLK 440
            +K+  +L  I+L  N I + GA  +++ L   NR++  + +  NNI  +G  A+++ +K
Sbjct: 272 VLKSNTTLEVIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMK 331

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKF 469
            N   + + +  N        A S++++ 
Sbjct: 332 TNLTFSHIYIWGNKFDEATCIAYSDLIQM 360



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 1/231 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L++  K     + +D+      D G ++ A+ L        ++   N I   G +    V
Sbjct: 102 LSKILKNCLYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKV 161

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  LK L ++GN I ++G      +L  N+ +E+L L   DL +E    +  +LK N
Sbjct: 162 LHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDL-EESTVHVGRMLKEN 220

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L +  + I  SG   L +AL  NS++R L ++ N     G   LA  L+ N +L 
Sbjct: 221 HCLVALHMCKHDIKNSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLE 280

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            + L  N I + G   L   L+S    L  L + +N+I  +G   +++ +K
Sbjct: 281 VIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMK 331



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 14/197 (7%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN-------IHSKGASAIARVLKDNSV 444
           IN ++  I  E  E+I   L       T+++ GNN       +  +    ++++LK+   
Sbjct: 55  INPFILHILQEVDEEIKKGLAAG---ITLNIAGNNRLVPVERVTGEDFWILSKILKNCLY 111

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           I  LD+ YN +   GA   +++L+   N+  L L +  IG  G E +A +L  N T+  L
Sbjct: 112 INGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYL 171

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            +  N + ++G    A   + +N +L  +DL   ++ ++    + + LK N    + +L+
Sbjct: 172 RMTGNKIENKGGMFFAAMLQ-INSSLEKLDLGDCDL-EESTVHVGRMLKENH--CLVALH 227

Query: 565 LANNFLTKFGQSALTDA 581
           +  + +   G   L DA
Sbjct: 228 MCKHDIKNSGIQQLCDA 244


>gi|399498042|emb|CCG20349.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDAFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEG   IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDAFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 131/260 (50%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  +  LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSVALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSVALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +G  AIA ALK +   ++  L +A N +T
Sbjct: 369 EGVIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|145348360|ref|XP_001418618.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578848|gb|ABO96911.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 241

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 122/229 (53%), Gaps = 3/229 (1%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLE 300
           L D   +++L LS+  L     + IA +L  N   L  L+L  N I   G  +LA AL +
Sbjct: 4   LTDARSLKKLDLSACGLSASAGERIAAVLDENGCPLERLDLRGNAIGAEGTLALASALRK 63

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS-GLSSRKG 359
             T++SL+L  N  G  G  ALA  L G  S+ EL +  N  GDEG  AL + G  SR  
Sbjct: 64  TKTLKSLNLAQNLIGGDGLRALASALAGETSMEELDIQHNGCGDEGCMALATHGFGSRLE 123

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            L +    +N+    GA  +A+ +K+  S L  +NL  N++ D+ A  IADAL +N+T+ 
Sbjct: 124 TLLLDLDLSNNSVRDGAKWLAKSLKSGASNLKQLNLQANEMTDDDAWYIADALGENKTLK 183

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           T++LG N      AS IA  L++N  + +LDL  N IG +GA  L + +
Sbjct: 184 TLNLGSNAFGDSAASDIASDLRENIALETLDLTRNGIGREGACELMDAM 232



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 105/207 (50%), Gaps = 11/207 (5%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
           + + +SL  ++L    +     E+IA  L +N   +  +DL GN I ++G  A+A  L+ 
Sbjct: 4   LTDARSLKKLDLSACGLSASAGERIAAVLDENGCPLERLDLRGNAIGAEGTLALASALRK 63

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM---LRYN 498
              + SL+LA N IG DG +AL+  L    ++  L +     G  G   +A      R  
Sbjct: 64  TKTLKSLNLAQNLIGGDGLRALASALAGETSMEELDIQHNGCGDEGCMALATHGFGSRLE 123

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
             +  LDL  N +RD GAK LA+S K     L  ++L  NE+ DD A+ IA AL  N+  
Sbjct: 124 TLLLDLDLSNNSVRD-GAKWLAKSLKSGASNLKQLNLQANEMTDDDAWYIADALGENK-- 180

Query: 559 AVTSLNLANNFLTKFGQSALTD-AKDL 584
            + +LNL +N    FG SA +D A DL
Sbjct: 181 TLKTLNLGSN---AFGDSAASDIASDL 204



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 4/229 (1%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +SL++L L    +       + + L      L  LD+  N+I A+G   +A  ++  K+L
Sbjct: 8   RSLKKLDLSACGLSASAGERIAAVLDENGCPLERLDLRGNAIGAEGTLALASALRKTKTL 67

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             +NL  N IG +G   +A AL    ++  +D+  N    +G  A+A     + + T L 
Sbjct: 68  KSLNLAQNLIGGDGLRALASALAGETSMEELDIQHNGCGDEGCMALATHGFGSRLETLLL 127

Query: 450 LAYNPIGA--DGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
                  +  DGAK L++ LK    N+  L L   ++    A ++AD L  N T+  L+L
Sbjct: 128 DLDLSNNSVRDGAKWLAKSLKSGASNLKQLNLQANEMTDDDAWYIADALGENKTLKTLNL 187

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            +N   D  A  +A   +  N AL ++DL  N I  +GA  +  A+  N
Sbjct: 188 GSNAFGDSAASDIASDLR-ENIALETLDLTRNGIGREGACELMDAMDEN 235



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           E +    N I A G  A    L+    LK+LNL+ N IG +G++ L   L     +E L 
Sbjct: 40  ERLDLRGNAIGAEGTLALASALRKTKTLKSLNLAQNLIGGDGLRALASALAGETSMEELD 99

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +      DEG  A+A                      GF S  E LL +  + +  +   
Sbjct: 100 IQHNGCGDEGCMALA--------------------THGFGSRLETLLLDLDLSNNSVRD- 138

Query: 313 YGGALGANALAKGLE-GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
                GA  LAK L+ G  +L++L+L  N + D+    +   L   K  L  L++G+N+ 
Sbjct: 139 -----GAKWLAKSLKSGASNLKQLNLQANEMTDDDAWYIADALGENK-TLKTLNLGSNAF 192

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
               A  +A  ++   +L  ++L  N IG EGA ++ DA+ +N T+
Sbjct: 193 GDSAASDIASDLRENIALETLDLTRNGIGREGACELMDAMDENTTL 238



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 31/180 (17%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF-------- 210
           ++ +   S++++    G +GL  LA +L    + EE+    NG    G  A         
Sbjct: 62  RKTKTLKSLNLAQNLIGGDGLRALASALAGETSMEELDIQHNGCGDEGCMALATHGFGSR 121

Query: 211 ----------------DGV------LQSNIA-LKTLNLSGNPIGDEGVKCLCDILVDNAG 247
                           DG       L+S  + LK LNL  N + D+    + D L +N  
Sbjct: 122 LETLLLDLDLSNNSVRDGAKWLAKSLKSGASNLKQLNLQANEMTDDDAWYIADALGENKT 181

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           ++ L L S    D  A  IA  L+ N  L  L+L  N I   G   L +A+ EN+T+R L
Sbjct: 182 LKTLNLGSNAFGDSAASDIASDLRENIALETLDLTRNGIGREGACELMDAMDENTTLRRL 241



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 8/101 (7%)

Query: 157 FAKELRAFSS----VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN--GITAAGIKAF 210
            AK L++ +S    +++      D+  +++A++LG N+T + ++  +N  G +AA   A 
Sbjct: 143 LAKSLKSGASNLKQLNLQANEMTDDDAWYIADALGENKTLKTLNLGSNAFGDSAASDIAS 202

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
           D  L+ NIAL+TL+L+ N IG EG   L D + +N  + RL
Sbjct: 203 D--LRENIALETLDLTRNGIGREGACELMDAMDENTTLRRL 241


>gi|431839151|gb|ELK01078.1| hypothetical protein PAL_GLEAN10020677 [Pteropus alecto]
          Length = 504

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 18/297 (6%)

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            L N     ++LN +  G  G  A+A  L  N ++  L L  N I DEG+ +L+  L   
Sbjct: 84  FLRNMEESYVNLNHHGLGPNGTKAIAIALVSNTTVITLELADNCIMDEGVLSLVEMLQEN 143

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
              L  ++I +N++  +GA  ++E++K N  SL+ + L  N+  DE AE  + AL  N  
Sbjct: 144 Y-YLQEMNISDNALGLEGARIISEFLKRNTSSLVNLQLSGNNFKDEAAELFSQALSANYR 202

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I  +DL  N    KG   + ++L  N  + SL+L++N     GA AL   L+ +  + TL
Sbjct: 203 IKAVDLSHNQFSDKGGEYLGQMLALNVGLLSLNLSWNHFCTRGAVALCSGLRTNVTLKTL 262

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L     G  GA  + D+LR N+ ++ LD+ +N +  EG   +++           ++L 
Sbjct: 263 DLSMNGFGNEGAAALGDVLRLNSFLAHLDVSSNNIGSEGISKISK----------GLELF 312

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF------GQSALTDAKDLVYE 587
            N I  DGA  +  ++K N    + +L+++N  +++       G  A+    D++Y+
Sbjct: 313 LNPINMDGAVLLILSIKKNPKSKMENLDISNVLVSEQFVKILDGVYAIHPQLDVIYK 369



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 125/275 (45%), Gaps = 37/275 (13%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN  + TL L+ N I DEGV  L ++L +N  +
Sbjct: 87  NMEESYVNLNHHGLGPNGTKAIAIALVSNTTVITLELADNCIMDEGVLSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + + +S   L  EGA+ I+E LK N+                           S++ +L 
Sbjct: 147 QEMNISDNALGLEGARIISEFLKRNT---------------------------SSLVNLQ 179

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+GN      A   ++ L  N  ++ + L  N   D+G   L   L+   G L+ L++  
Sbjct: 180 LSGNNFKDEAAELFSQALSANYRIKAVDLSHNQFSDKGGEYLGQMLALNVGLLS-LNLSW 238

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N    +GA  +   ++   +L  ++L MN  G+EGA  + D L+ N  +  +D+  NNI 
Sbjct: 239 NHFCTRGAVALCSGLRTNVTLKTLDLSMNGFGNEGAAALGDVLRLNSFLAHLDVSSNNIG 298

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           S+G S I++          L+L  NPI  DGA  L
Sbjct: 299 SEGISKISK---------GLELFLNPINMDGAVLL 324



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 128/251 (50%), Gaps = 11/251 (4%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N T   +  A N I   G+ +   +LQ N  L+ +N
Sbjct: 91  SYVNLNHHGLGPNGTKAIAIALVSNTTVITLELADNCIMDEGVLSLVEMLQENYYLQEMN 150

Query: 225 LSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + + L  N + +  LQLS  + +DE A+  ++ L  N  ++ ++L++
Sbjct: 151 ISDNALGLEGARIISEFLKRNTSSLVNLQLSGNNFKDEAAELFSQALSANYRIKAVDLSH 210

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  + SL+L+ N+    GA AL  GL  N +L+ L L  N  G
Sbjct: 211 NQFSDKGGEYLGQMLALNVGLLSLNLSWNHFCTRGAVALCSGLRTNVTLKTLDLSMNGFG 270

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      LA LD+ +N+I ++G   +++ ++         L++N I  +G
Sbjct: 271 NEGAAALGDVL-RLNSFLAHLDVSSNNIGSEGISKISKGLE---------LFLNPINMDG 320

Query: 404 AEKIADALKQN 414
           A  +  ++K+N
Sbjct: 321 AVLLILSIKKN 331



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 1/151 (0%)

Query: 149 ESKQTLNEFAKE-LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           E  + ++EF K    +  ++ +SG NF DE     +++L  N   + V  + N  +  G 
Sbjct: 159 EGARIISEFLKRNTSSLVNLQLSGNNFKDEAAELFSQALSANYRIKAVDLSHNQFSDKGG 218

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           +    +L  N+ L +LNLS N     G   LC  L  N  ++ L LS     +EGA A+ 
Sbjct: 219 EYLGQMLALNVGLLSLNLSWNHFCTRGAVALCSGLRTNVTLKTLDLSMNGFGNEGAAALG 278

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEAL 298
           ++L+ NS L  L++++N I   G + +++ L
Sbjct: 279 DVLRLNSFLAHLDVSSNNIGSEGISKISKGL 309



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 11/231 (4%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITA 204
           +  E   +L E  +E      +++S    G EG   ++E L  N ++   +  + N    
Sbjct: 128 IMDEGVLSLVEMLQENYYLQEMNISDNALGLEGARIISEFLKRNTSSLVNLQLSGNNFKD 187

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
              + F   L +N  +K ++LS N   D+G + L  +L  N G+  L LS       GA 
Sbjct: 188 EAAELFSQALSANYRIKAVDLSHNQFSDKGGEYLGQMLALNVGLLSLNLSWNHFCTRGAV 247

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L+ L+L+ N     G  +L + L  NS +  L ++ N  G+ G + ++K
Sbjct: 248 ALCSGLRTNVTLKTLDLSMNGFGNEGAAALGDVLRLNSFLAHLDVSSNNIGSEGISKISK 307

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE         L  N I  +G +  ++S   + K K+  LDI N  +S +
Sbjct: 308 GLE---------LFLNPINMDGAVLLILSIKKNPKSKMENLDISNVLVSEQ 349


>gi|145520627|ref|XP_001446169.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413646|emb|CAK78772.1| unnamed protein product [Paramecium tetraurelia]
          Length = 763

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 161/348 (46%), Gaps = 16/348 (4%)

Query: 228 NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
           N +G E  K + DIL+ N     L+L+   + DEG   + E+LK N+ +  L+L++N + 
Sbjct: 183 NQLGLESAKTIRDILLYNNHFSTLRLARNSIGDEGLVELLEMLKVNNNIVHLDLSSNNLT 242

Query: 288 YSGFTSLAEALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             G   L   L+   +I S+ L      N N     G   +   L+ N  L+ L L G S
Sbjct: 243 ADGAFYLFNELVPLHSIISIELSSKDGLNRNKVSVKGCEPIETILKYNHPLQFLGLRGTS 302

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I + G   ++SGL +    L  L++ NN ++ +   ++ +YI  C +L+ ++L  N +G+
Sbjct: 303 IQNAGFECILSGLQT-NNTLTYLNVSNNDLNEEACNYMVQYISVC-NLVELDLSYNPLGN 360

Query: 402 EGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G + ++    K +  +  ++L G  I S G     + L  N  +  L L  N    +G 
Sbjct: 361 NGMDYLSRIFDKGSFMLKKLNLAGCEIKSLGILKFFQSLSVNRFLEKLILDENHFSGNGV 420

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
             +  VL     +  L +  C I A+GAEF+ + +  N T+  L LR N L D GA+C+ 
Sbjct: 421 NEIENVLTSRIPLAYLSMAKCSINATGAEFIGNGVERNRTLKTLILRDNRLTDVGAECIF 480

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           +           +DL    + D     +   +K  +   +T+L L +N
Sbjct: 481 KGL-----FFEKLDLKRCNLTDKCVLGLCSMIK--QSTQLTTLLLPDN 521



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/413 (23%), Positives = 168/413 (40%), Gaps = 69/413 (16%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA---- 204
           ES +T+ +       FS++ ++  + GDEGL  L E L  N     +  ++N +TA    
Sbjct: 188 ESAKTIRDILLYNNHFSTLRLARNSIGDEGLVELLEMLKVNNNIVHLDLSSNNLTADGAF 247

Query: 205 ------------------------------AGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
                                          G +  + +L+ N  L+ L L G  I + G
Sbjct: 248 YLFNELVPLHSIISIELSSKDGLNRNKVSVKGCEPIETILKYNHPLQFLGLRGTSIQNAG 307

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
            +C+   L  N  +  L +S+ DL +E    + + +   +++  L+L+ N +  +G   L
Sbjct: 308 FECILSGLQTNNTLTYLNVSNNDLNEEACNYMVQYISVCNLVE-LDLSYNPLGNNGMDYL 366

Query: 295 AEALLENS-TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +    + S  ++ L+L G    +LG     + L  N+ L +L L  N     G+  + + 
Sbjct: 367 SRIFDKGSFMLKKLNLAGCEIKSLGILKFFQSLSVNRFLEKLILDENHFSGNGVNEIENV 426

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI------ 407
           L+SR   LA L +   SI+A GA  +   ++  ++L  + L  N + D GAE I      
Sbjct: 427 LTSR-IPLAYLSMAKCSINATGAEFIGNGVERNRTLKTLILRDNRLTDVGAECIFKGLFF 485

Query: 408 ------------------ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
                                +KQ+  +TT+ L  N  H      I   ++ NS I +LD
Sbjct: 486 EKLDLKRCNLTDKCVLGLCSMIKQSTQLTTLLLPDNGFHDSSGIVICEAIRVNSSILNLD 545

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           +  NP+       +++V++     N LK    ++     E V    + NN I 
Sbjct: 546 ICENPLSYKYIDQINKVIE----TNRLKYELDRVPMYKREIV----KLNNIIQ 590


>gi|281338814|gb|EFB14398.1| hypothetical protein PANDA_011621 [Ailuropoda melanoleuca]
          Length = 402

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 166/363 (45%), Gaps = 14/363 (3%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRD 260
           ++ A   A   VL ++  L  L  S   +    +K LC+ L D N  +++L+L +  L +
Sbjct: 25  LSPAPCGALAAVLSTSQWLTDLEFSETKLEASALKLLCEDLKDPNCKLQKLKLCASLLPE 84

Query: 261 EG---AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGA 316
                 K +A +L  N  L  L+L+ N +  +G   L E L   N  +  L L+  Y   
Sbjct: 85  SPEVVCKYLAAVLICNPNLTELDLSENPLGDTGVKYLCEGLRHSNCKVEKLDLSTCYLTD 144

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                L+  L+ +++L+EL +  +++GD G++ L  GL   KG L  L +   S+SA   
Sbjct: 145 ASCMELSSFLQVSQTLKELFVFASALGDTGVQHLCEGLRHAKGILENLVLSECSLSAACC 204

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA-- 434
             +A+ + + +SL  + L  N I D G + + + LKQ       DL   N H  G     
Sbjct: 205 ESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQ-PDCQLKDLALWNCHLTGECCQD 263

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVAD 493
           +   L  N  +  LDL+ N +G  G + L E LK     ++TL L  C +  +    +A 
Sbjct: 264 LCNALYTNEYLRDLDLSDNALGNGGMQVLCEGLKHPSCKLHTLWLAECHLTDACCGALAS 323

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSF-----KVVNEALTSIDLAFNEIRDDGAFAI 548
           +L  N  +++LDL  N L+D G + L  S      K+    + +  L     R +G+F  
Sbjct: 324 VLNRNENLTLLDLSGNDLKDFGVQMLCDSLIQPICKLQTFYIDTDHLHEETFRKNGSFKN 383

Query: 549 AQA 551
            QA
Sbjct: 384 EQA 386



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 153/343 (44%), Gaps = 8/343 (2%)

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NST 303
           N  ++ L+L    L      A+A +L  +  L  LE +   ++ S    L E L + N  
Sbjct: 12  NCILQTLRLYRCLLSPAPCGALAAVLSTSQWLTDLEFSETKLEASALKLLCEDLKDPNCK 71

Query: 304 IRSLHLNGNY---GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           ++ L L  +       +    LA  L  N +L EL L  N +GD G++ L  GL     K
Sbjct: 72  LQKLKLCASLLPESPEVVCKYLAAVLICNPNLTELDLSENPLGDTGVKYLCEGLRHSNCK 131

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI-TT 419
           +  LD+    ++      ++ +++  ++L  + ++ + +GD G + + + L+  + I   
Sbjct: 132 VEKLDLSTCYLTDASCMELSSFLQVSQTLKELFVFASALGDTGVQHLCEGLRHAKGILEN 191

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKL 478
           + L   ++ +    ++A+VL     +T L L  N I   G K L E LK     +  L L
Sbjct: 192 LVLSECSLSAACCESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQPDCQLKDLAL 251

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
             C +     + + + L  N  +  LDL  N L + G + L +  K  +  L ++ LA  
Sbjct: 252 WNCHLTGECCQDLCNALYTNEYLRDLDLSDNALGNGGMQVLCEGLKHPSCKLHTLWLAEC 311

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            + D    A+A  L  NE+  +T L+L+ N L  FG   L D+
Sbjct: 312 HLTDACCGALASVLNRNEN--LTLLDLSGNDLKDFGVQMLCDS 352



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 14/276 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + +D+S    GD G+ +L E L + N   E++  +   +T A        LQ +  LK 
Sbjct: 103 LTELDLSENPLGDTGVKYLCEGLRHSNCKVEKLDLSTCYLTDASCMELSSFLQVSQTLKE 162

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L +  + +GD GV+ LC+ L    G+ E L LS   L     +++A++L +   L  L L
Sbjct: 163 LFVFASALGDTGVQHLCEGLRHAKGILENLVLSECSLSAACCESLAQVLSSTRSLTRLLL 222

Query: 282 NNNMIDYSGFTSLAEAL------LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            NN I+  G   L E L      L++  + + HL G          L   L  N+ LR+L
Sbjct: 223 INNKIEDLGLKLLCEGLKQPDCQLKDLALWNCHLTGE-----CCQDLCNALYTNEYLRDL 277

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N++G+ G++ L  GL     KL  L +    ++      +A  +   ++L  ++L 
Sbjct: 278 DLSDNALGNGGMQVLCEGLKHPSCKLHTLWLAECHLTDACCGALASVLNRNENLTLLDLS 337

Query: 396 MNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSK 430
            ND+ D G + + D+L Q    + T  +  +++H +
Sbjct: 338 GNDLKDFGVQMLCDSLIQPICKLQTFYIDTDHLHEE 373


>gi|115673327|ref|XP_798473.2| PREDICTED: leucine-rich repeat-containing protein 34-like
           [Strongylocentrotus purpuratus]
          Length = 363

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 121/225 (53%), Gaps = 12/225 (5%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N I+ KGA H+AE +K   +L  ++L  ND+G EG   IA+ L+ N T+  + L 
Sbjct: 38  LDMRYNQITDKGAEHIAELLKETCALKRLSLMCNDLGPEGGAIIANGLQLNETLQELKLN 97

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL----KLG 479
           GN I +KG  A+A VL+ N+ + SLDL           A + VL ++  +  L     L 
Sbjct: 98  GNKIGNKGGMALAGVLQVNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLL 157

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
           + Q   +   F A ML+ N+T++ L L+   ++D GA+ L++   V N  L  +DLA N+
Sbjct: 158 FSQQEETTIHF-AKMLKVNSTLTELHLQKCDIKDTGAERLSEML-VENIGLKYLDLACNK 215

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG----QSALTD 580
           IR DGA  +++ L  N  + V  L+L +N +   G      ALTD
Sbjct: 216 IRRDGAKYLSRVLMKNTPLEV--LDLGHNCIEDDGAMDLSRALTD 258



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 134/278 (48%), Gaps = 5/278 (1%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+   + DE    L  +L +N  V  L +    + D+GA+ IAELLK    L+ L L  N
Sbjct: 12  LTDKMLQDEDAYVLLKVLANNTYVTGLDMRYNQITDKGAEHIAELLKETCALKRLSLMCN 71

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +   G   +A  L  N T++ L LNGN  G  G  ALA  L+ N +L+ L L G++  D
Sbjct: 72  DLGPEGGAIIANGLQLNETLQELKLNGNKIGNKGGMALAGVLQVNTALQSLDL-GDTDQD 130

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
                  + + +    L  L +      S   +   H A+ +K   +L  ++L   DI D
Sbjct: 131 TQSMIAFTTVLNYNSTLKALCMNRPLLFSQQEETTIHFAKMLKVNSTLTELHLQKCDIKD 190

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            GAE++++ L +N  +  +DL  N I   GA  ++RVL  N+ +  LDL +N I  DGA 
Sbjct: 191 TGAERLSEMLVENIGLKYLDLACNKIRRDGAKYLSRVLMKNTPLEVLDLGHNCIEDDGAM 250

Query: 462 ALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            LS  L   + N++TL +    I A G   +A  +  N
Sbjct: 251 DLSRALTDMNSNLHTLVITSNNIRAPGLCAIASAMENN 288



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 127/288 (44%), Gaps = 33/288 (11%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           VL +N  +  L++  N I D+G + + ++L +   ++RL L   DL  EG   IA  L+ 
Sbjct: 28  VLANNTYVTGLDMRYNQITDKGAEHIAELLKETCALKRLSLMCNDLGPEGGAIIANGLQL 87

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG---------------NYGGAL 317
           N  L+ L+LN N I   G  +LA  L  N+ ++SL L                 NY   L
Sbjct: 88  NETLQELKLNGNKIGNKGGMALAGVLQVNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTL 147

Query: 318 GANAL----------------AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            A  +                AK L+ N +L ELHL    I D G   L   L    G L
Sbjct: 148 KALCMNRPLLFSQQEETTIHFAKMLKVNSTLTELHLQKCDIKDTGAERLSEMLVENIG-L 206

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTI 420
             LD+  N I   GA +++  +     L  ++L  N I D+GA  ++ AL   N  + T+
Sbjct: 207 KYLDLACNKIRRDGAKYLSRVLMKNTPLEVLDLGHNCIEDDGAMDLSRALTDMNSNLHTL 266

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            +  NNI + G  AIA  +++N    S+ +  N    D   A   +++
Sbjct: 267 VITSNNIRAPGLCAIASAMENNPNFNSVFIWGNHHEEDACNAFHRLIE 314



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 134/306 (43%), Gaps = 6/306 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + +DM      D+G   +AE L      + +S   N +   G       LQ N  L+ L 
Sbjct: 36  TGLDMRYNQITDKGAEHIAELLKETCALKRLSLMCNDLGPEGGAIIANGLQLNETLQELK 95

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L+GN IG++G   L  +L  N  ++ L L   D   +   A   +L  NS L+ L +N  
Sbjct: 96  LNGNKIGNKGGMALAGVLQVNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRP 155

Query: 285 MI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           ++           A+ L  NST+  LHL        GA  L++ L  N  L+ L L  N 
Sbjct: 156 LLFSQQEETTIHFAKMLKVNSTLTELHLQKCDIKDTGAERLSEMLVENIGLKYLDLACNK 215

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMNDIG 400
           I  +G + L S +  +   L VLD+G+N I   GA  ++  + +  S L  + +  N+I 
Sbjct: 216 IRRDGAKYL-SRVLMKNTPLEVLDLGHNCIEDDGAMDLSRALTDMNSNLHTLVITSNNIR 274

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             G   IA A++ N    ++ + GN+      +A  R+++  + +        P   DG 
Sbjct: 275 APGLCAIASAMENNPNFNSVFIWGNHHEEDACNAFHRLIEGGN-LEPEKTDVKPYVVDGQ 333

Query: 461 KALSEV 466
             LSE+
Sbjct: 334 VYLSEL 339



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 3/233 (1%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  KE  A   + +   + G EG   +A  L  N+T +E+    N I   G  A  GVLQ
Sbjct: 55  ELLKETCALKRLSLMCNDLGPEGGAIIANGLQLNETLQELKLNGNKIGNKGGMALAGVLQ 114

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL---RDEGAKAIAELLKN 272
            N AL++L+L       + +     +L  N+ ++ L ++   L   ++E     A++LK 
Sbjct: 115 VNTALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLLFSQQEETTIHFAKMLKV 174

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           NS L  L L    I  +G   L+E L+EN  ++ L L  N     GA  L++ L  N  L
Sbjct: 175 NSTLTELHLQKCDIKDTGAERLSEMLVENIGLKYLDLACNKIRRDGAKYLSRVLMKNTPL 234

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
             L L  N I D+G   L   L+     L  L I +N+I A G   +A  ++N
Sbjct: 235 EVLDLGHNCIEDDGAMDLSRALTDMNSNLHTLVITSNNIRAPGLCAIASAMEN 287



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 10/195 (5%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVS------FAANGITAAGIKAFDGVLQS 216
           A  S+D+   +   + +      L YN T + +       F+    T      F  +L+ 
Sbjct: 118 ALQSLDLGDTDQDTQSMIAFTTVLNYNSTLKALCMNRPLLFSQQEETTI---HFAKMLKV 174

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  L  L+L    I D G + L ++LV+N G++ L L+   +R +GAK ++ +L  N+ L
Sbjct: 175 NSTLTELHLQKCDIKDTGAERLSEMLVENIGLKYLDLACNKIRRDGAKYLSRVLMKNTPL 234

Query: 277 RVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            VL+L +N I+  G   L+ AL + NS + +L +  N   A G  A+A  +E N +   +
Sbjct: 235 EVLDLGHNCIEDDGAMDLSRALTDMNSNLHTLVITSNNIRAPGLCAIASAMENNPNFNSV 294

Query: 336 HLHGNSIGDEGIRAL 350
            + GN   ++   A 
Sbjct: 295 FIWGNHHEEDACNAF 309


>gi|71423289|ref|XP_812408.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70877185|gb|EAN90557.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 449

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 186/363 (51%), Gaps = 7/363 (1%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +++ ++ ++L  N +G E  + +  +L +++ V  + L   D+  EG  A+A ++  ++ 
Sbjct: 60  ADVPVRVVDLIDNQLGPEQTQKIASML-ESSTVRDVLLRYNDIGKEGCDALANVVNVSTK 118

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L++L++  N +  +    L +++  ++ +  L L+ N  G  GA  L + LE N  L+ L
Sbjct: 119 LQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNVYLKSL 178

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N IG  G  ++   L+     L  L +  N +   G   +A+ +K  + L  + L 
Sbjct: 179 DLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVGLIADAVKGNRCLKDLTLG 238

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNP 454
            N+  D  AE +A+ L++N T+ T+DL  N + + G   +AR  L +N  + SL L+ NP
Sbjct: 239 NNNATDAAAEALAEMLRENSTLETLDLRSNTLTATGVRILARDGLANNVFLVSLSLSANP 298

Query: 455 IGADGAKALSEVLKFH--GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
           IG+ GA  +++ L  H  G +  L L  C++G +G   +A ++    T++ ++L  N L 
Sbjct: 299 IGSVGADEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLD 358

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           +E A  L++S        + +DL+ NEI + GA  +  A + N    ++SL L  N + +
Sbjct: 359 NEAAVVLSRSIVNSISI-SIVDLSANEIGEWGASNLIDATQLN--ARISSLLLHGNNINR 415

Query: 573 FGQ 575
             Q
Sbjct: 416 IVQ 418



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 150/309 (48%), Gaps = 3/309 (0%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G EG   LA  +  +   + +    NG+TAA ++     +  + AL  L LS N IG 
Sbjct: 100 DIGKEGCDALANVVNVSTKLQLLDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGH 159

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSILRVLELNNNMIDYSGF 291
           EG   L   L  N  ++ L LS  ++   GA++IA LL    S L+ L+L  N +  +G 
Sbjct: 160 EGAALLFRALEKNVYLKSLDLSLNEIGPSGAESIAHLLALPASPLKTLQLYGNHLGVAGV 219

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             +A+A+  N  ++ L L  N      A ALA+ L  N +L  L L  N++   G+R L 
Sbjct: 220 GLIADAVKGNRCLKDLTLGNNNATDAAAEALAEMLRENSTLETLDLRSNTLTATGVRILA 279

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAE--YIKNCKSLLWINLYMNDIGDEGAEKIAD 409
               +    L  L +  N I + GA  +A+   +    +L  ++L   ++G  G  +IA 
Sbjct: 280 RDGLANNVFLVSLSLSANPIGSVGADEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIAS 339

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            +    T+  ++L GN + ++ A  ++R + ++  I+ +DL+ N IG  GA  L +  + 
Sbjct: 340 LIAATITLNEVNLSGNQLDNEAAVVLSRSIVNSISISIVDLSANEIGEWGASNLIDATQL 399

Query: 470 HGNINTLKL 478
           +  I++L L
Sbjct: 400 NARISSLLL 408



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 167/349 (47%), Gaps = 6/349 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+     G E    +A S+  + T  +V    N I   G  A   V+  +  L+ L++ 
Sbjct: 67  VDLIDNQLGPEQTQKIA-SMLESSTVRDVLLRYNDIGKEGCDALANVVNVSTKLQLLDIR 125

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN +    V+ L   +  +  + RL LS+  +  EGA  +   L+ N  L+ L+L+ N I
Sbjct: 126 GNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLFRALEKNVYLKSLDLSLNEI 185

Query: 287 DYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
             SG  S+A  L L  S +++L L GN+ G  G   +A  ++GN+ L++L L GN+   +
Sbjct: 186 GPSGAESIAHLLALPASPLKTLQLYGNHLGVAGVGLIADAVKGNRCLKDLTL-GNNNATD 244

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-EYIKNCKSLLWINLYMNDIGDEGA 404
                ++ +      L  LD+ +N+++A G   +A + + N   L+ ++L  N IG  GA
Sbjct: 245 AAAEALAEMLRENSTLETLDLRSNTLTATGVRILARDGLANNVFLVSLSLSANPIGSVGA 304

Query: 405 EKIADAL--KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           ++IA  L   Q   +T +DL    +   G   IA ++     +  ++L+ N +  + A  
Sbjct: 305 DEIAKTLIMHQGGALTRLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVV 364

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           LS  +    +I+ + L   +IG  GA  + D  + N  IS L L  N +
Sbjct: 365 LSRSIVNSISISIVDLSANEIGEWGASNLIDATQLNARISSLLLHGNNI 413


>gi|426244300|ref|XP_004015961.1| PREDICTED: LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing
            protein 5 [Ovis aries]
          Length = 1164

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 138/306 (45%), Gaps = 3/306 (0%)

Query: 201  GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLR 259
            G+T A  +    VL ++++LK+L+L GN + D+GVK LCD L V    +++L L S  L 
Sbjct: 758  GLTPASCRVISQVLATSVSLKSLSLMGNKVADQGVKSLCDALKVAPCTLQKLILGSCGLA 817

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALG 318
                + +A  L  N  L  L L+ + +   G + L  A+ L +  ++ L LN       G
Sbjct: 818  ATTCQDLASALIENQGLTHLSLSGDELGSEGMSLLCRAVKLPSCGLQKLALNACSLDVAG 877

Query: 319  ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
               LA  L  N+ L  L L  N + D G+  L   +      L  LD+ N  ++A     
Sbjct: 878  CGFLALALMSNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLQDLDLVNCRLTAACCES 937

Query: 379  VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            ++  I   + L  ++L  N +GDEG   +   LKQ   +T + L    + S+G  A++  
Sbjct: 938  LSNVITRSRHLRSLDLAANALGDEGIVALCKGLKQKNALTRLGLEACGLTSEGCKALSAA 997

Query: 439  LKDNSVITSLDLAYNPIGADGAKAL-SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L  +  + SL+L  N +   G   L S  +    N+ T+ L   Q  A     +  + R 
Sbjct: 998  LICSRHLASLNLMRNDLSPGGMAMLCSAFMHPSSNLQTIGLWKEQYPARVRRLLEQVQRL 1057

Query: 498  NNTISI 503
               + I
Sbjct: 1058 KPHVVI 1063



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 183/408 (44%), Gaps = 21/408 (5%)

Query: 189  NQTAEEVSFAANGITAAGIKAFD-------GVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +++AE    A  G+    IK  D        VL ++  L+ L+LSG+ +  E +K LC  
Sbjct: 624  DESAEAWPGAPQGLK---IKTLDEHWEDLCSVLGTHPNLRELDLSGSVLSKEAMKTLCVK 680

Query: 242  LVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRV----LELNNNMIDYSGFTSLAE 296
            L   A  ++ L  +   +          LL N ++ R+      L    + +    +   
Sbjct: 681  LRQPACKIQNLIFTGARVTPGLRHLWMTLLVNRNVTRLDLAGSRLARGRLRFEDVRAAGA 740

Query: 297  ALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
            AL   +  +++L L+           +++ L  + SL+ L L GN + D+G+++L   L 
Sbjct: 741  ALRHPHCALQTLRLDRCGLTPASCRVISQVLATSVSLKSLSLMGNKVADQGVKSLCDALK 800

Query: 356  SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                 L  L +G+  ++A     +A  +   + L  ++L  +++G EG   +  A+K   
Sbjct: 801  VAPCTLQKLILGSCGLAATTCQDLASALIENQGLTHLSLSGDELGSEGMSLLCRAVKLPS 860

Query: 416  T-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV-LKFHGNI 473
              +  + L   ++   G   +A  L  N  +T L L+ NP+   G   L EV ++    +
Sbjct: 861  CGLQKLALNACSLDVAGCGFLALALMSNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPL 920

Query: 474  NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
              L L  C++ A+  E +++++  +  +  LDL AN L DEG   L +  K  N ALT +
Sbjct: 921  QDLDLVNCRLTAACCESLSNVITRSRHLRSLDLAANALGDEGIVALCKGLKQKN-ALTRL 979

Query: 534  DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             L    +  +G  A++ AL  +  +A  SLNL  N L+  G + L  A
Sbjct: 980  GLEACGLTSEGCKALSAALICSRHLA--SLNLMRNDLSPGGMAMLCSA 1025



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 138/290 (47%), Gaps = 7/290 (2%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGYNQ-TAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  S+ + G    D+G+  L ++L     T +++   + G+ A   +     L  N  L 
Sbjct: 776  SLKSLSLMGNKVADQGVKSLCDALKVAPCTLQKLILGSCGLAATTCQDLASALIENQGLT 835

Query: 222  TLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
             L+LSG+ +G EG+  LC  + + + G+++L L++  L   G   +A  L +N  L  L 
Sbjct: 836  HLSLSGDELGSEGMSLLCRAVKLPSCGLQKLALNACSLDVAGCGFLALALMSNRHLTHLS 895

Query: 281  LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L+ N ++  G   L E ++E S  ++ L L      A    +L+  +  ++ LR L L  
Sbjct: 896  LSMNPLEDPGMNLLCEVMMEPSCPLQDLDLVNCRLTAACCESLSNVITRSRHLRSLDLAA 955

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N++GDEGI AL  GL  +K  L  L +    ++++G   ++  +   + L  +NL  ND+
Sbjct: 956  NALGDEGIVALCKGL-KQKNALTRLGLEACGLTSEGCKALSAALICSRHLASLNLMRNDL 1014

Query: 400  GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARV--LKDNSVIT 446
               G   +  A +  +  + TI L      ++    + +V  LK + VI+
Sbjct: 1015 SPGGMAMLCSAFMHPSSNLQTIGLWKEQYPARVRRLLEQVQRLKPHVVIS 1064



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 2/293 (0%)

Query: 245  NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENST 303
            +  ++ L+L    L     + I+++L  +  L+ L L  N +   G  SL +AL +   T
Sbjct: 746  HCALQTLRLDRCGLTPASCRVISQVLATSVSLKSLSLMGNKVADQGVKSLCDALKVAPCT 805

Query: 304  IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
            ++ L L      A     LA  L  N+ L  L L G+ +G EG+  L   +      L  
Sbjct: 806  LQKLILGSCGLAATTCQDLASALIENQGLTHLSLSGDELGSEGMSLLCRAVKLPSCGLQK 865

Query: 364  LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDL 422
            L +   S+   G   +A  + + + L  ++L MN + D G   + + + +    +  +DL
Sbjct: 866  LALNACSLDVAGCGFLALALMSNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLQDLDL 925

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
                + +    +++ V+  +  + SLDLA N +G +G  AL + LK    +  L L  C 
Sbjct: 926  VNCRLTAACCESLSNVITRSRHLRSLDLAANALGDEGIVALCKGLKQKNALTRLGLEACG 985

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
            + + G + ++  L  +  ++ L+L  N L   G   L  +F   +  L +I L
Sbjct: 986  LTSEGCKALSAALICSRHLASLNLMRNDLSPGGMAMLCSAFMHPSSNLQTIGL 1038



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 30/238 (12%)

Query: 160  ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNI 218
            E +  + + +SG   G EG+  L  ++       ++++  A  +  AG       L SN 
Sbjct: 830  ENQGLTHLSLSGDELGSEGMSLLCRAVKLPSCGLQKLALNACSLDVAGCGFLALALMSNR 889

Query: 219  ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
             L  L+LS NP+ D G+  LC+++++          S  L+D                  
Sbjct: 890  HLTHLSLSMNPLEDPGMNLLCEVMME---------PSCPLQD------------------ 922

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L+L N  +  +   SL+  +  +  +RSL L  N  G  G  AL KGL+   +L  L L 
Sbjct: 923  LDLVNCRLTAACCESLSNVITRSRHLRSLDLAANALGDEGIVALCKGLKQKNALTRLGLE 982

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG-AFHVAEYIKNCKSLLWINLY 395
               +  EG +AL + L   +  LA L++  N +S  G A   + ++    +L  I L+
Sbjct: 983  ACGLTSEGCKALSAALICSR-HLASLNLMRNDLSPGGMAMLCSAFMHPSSNLQTIGLW 1039



 Score = 42.7 bits (99), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 40/88 (45%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            ++L+      R   S+D++    GDEG+  L + L        +   A G+T+ G KA  
Sbjct: 936  ESLSNVITRSRHLRSLDLAANALGDEGIVALCKGLKQKNALTRLGLEACGLTSEGCKALS 995

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLC 239
              L  +  L +LNL  N +   G+  LC
Sbjct: 996  AALICSRHLASLNLMRNDLSPGGMAMLC 1023


>gi|355710190|gb|EHH31654.1| hypothetical protein EGK_12770 [Macaca mulatta]
          Length = 1044

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 5/244 (2%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L   +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 779  GPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 834

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 835  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGARV 894

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 895  LAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 954

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            L  N  +  L L  N L+DEG  CLA+  K  N +L  + L+ N I   GA A+ QAL+ 
Sbjct: 955  LAKNVMLEELCLEENHLQDEGVCCLAEGLK-RNSSLKILKLSNNCITYLGAEALLQALER 1013

Query: 555  NEDV 558
            N+ +
Sbjct: 1014 NDTI 1017



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 135/269 (50%), Gaps = 4/269 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 768  VGHLKLTFCSVGPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 824

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 825  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 883

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 884  NNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 943

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G   L+E LK + ++  LKL    I   G
Sbjct: 944  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNNCITYLG 1003

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGA 516
            AE +   L  N+TI  + LR N    E A
Sbjct: 1004 AEALLQALERNDTILEVWLRGNTFSLEEA 1032



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 127/278 (45%), Gaps = 8/278 (2%)

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
            G N    +++F + G       AF  VL+       L L  N +GD GV+ L   L    
Sbjct: 765  GLNVGHLKLTFCSVGPAECAALAF--VLRHLRQPVALQLDYNSVGDIGVEQLLPCL---- 818

Query: 247  GVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
            GV + L L   ++ D G   + E   +   L+ L L NN +      S+A+ L       
Sbjct: 819  GVCKALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFL 878

Query: 306  SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            +L L  N+  A GA  LA+GL GN SL+ L   GN +GDEG +AL   L   +  L  L 
Sbjct: 879  ALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQS-LRWLS 937

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +  N+I + GA  +A  +     L  + L  N + DEG   +A+ LK+N ++  + L  N
Sbjct: 938  LVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNN 997

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             I   GA A+ + L+ N  I  + L  N    + A  L
Sbjct: 998  CITYLGAEALLQALERNDTILEVWLRGNTFSLEEADKL 1035



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 85/164 (51%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 867  MAKLLACRQNFLALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEA 926

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G   LAE L  N
Sbjct: 927  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRN 986

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E
Sbjct: 987  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLE 1030



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 87/174 (50%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F ++ +   +    G   LAE L  N + + + F 
Sbjct: 852  LALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGARVLAEGLRGNASLQFLGFW 911

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A    L  + +L+ L+L GN IG  G + L  +L  N  +E L L    L
Sbjct: 912  GNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHL 971

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            +DEG   +AE LK NS L++L+L+NN I Y G  +L +AL  N TI  + L GN
Sbjct: 972  QDEGVCCLAEGLKRNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGN 1025



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 29/235 (12%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 830  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 889

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  NA ++ L      + DEGA+A+AE                        
Sbjct: 890  AGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAE------------------------ 925

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
                AL ++ ++R L L GN  G++GA ALA  L  N  L EL L  N + DEG+  L  
Sbjct: 926  ----ALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAE 981

Query: 353  GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            GL  R   L +L + NN I+  GA  + + ++   ++L + L  N    E A+K+
Sbjct: 982  GL-KRNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEADKL 1035


>gi|29427819|sp|Q8K3Z0.1|NOD2_MOUSE RecName: Full=Nucleotide-binding oligomerization domain-containing
           protein 2; AltName: Full=Caspase recruitment
           domain-containing protein 15
 gi|21702727|gb|AAM76073.1|AF520774_1 CARD15 [Mus musculus]
          Length = 1020

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 129/270 (47%), Gaps = 10/270 (3%)

Query: 294 LAEALLENSTIRSL---HLNGNYG--GALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           + E  L    +R L   HL   +   G     ALA  L+  +    L L  NS+GD G+ 
Sbjct: 729 MQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVE 788

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            L   L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A
Sbjct: 789 QLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMA 844

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L   +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+ 
Sbjct: 845 KLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVA 904

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
            H N+  L L    IG+ GAE +A ML  N ++  L L  N + DEG   LA+  K  N 
Sbjct: 905 DHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHICDEGVYSLAEGLK-RNS 963

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            L  + L+ N I   GA A+ QAL  N  +
Sbjct: 964 TLKFLKLSNNGITYRGAEALLQALSRNSAI 993



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 748  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 801

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 802  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 861

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 862  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 920

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 921  SMGAEALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 980

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 981  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1012



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 813  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 872

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 873  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLE 932

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 933  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 992

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 993  ILEVWLRGNTFSLEEIQT----LSSRDARL 1018



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 761  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 817

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 818  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 876

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 877  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKS 936

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 937  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 996

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 997  WLRGNTFSLEEIQTLS 1012



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 828  LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 887

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 888  GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHI 947

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
             DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 948  CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 1001


>gi|440793719|gb|ELR14895.1| calponin domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 785

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 2/235 (0%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           LHL+          AL   L  N  L+ L L    + D  +R L   L++    L VL +
Sbjct: 526 LHLDDRPLSQEALRALTAVLAHNYHLKTLSLENAELEDNDVRRLAPALAALT-HLRVLKL 584

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
           G N IS+ GA  VAE +   KSL  + L  N+IGDEGA+ +A AL    ++  +DL  + 
Sbjct: 585 GKNKISSAGAAAVAEALPKMKSLEELYLNENEIGDEGADALAQALAHKSSLRVVDLSASK 644

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           +  KGA+AIA  L +   + SL L+ N I  +GA+AL+ +L+    + ++ LG   I   
Sbjct: 645 VSDKGAAAIAGALTEEHGLGSLILSRNAITDEGAQALAALLRRRTALESIHLGGNGISDE 704

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           GA+ +A  L+ N+ I+ +DL AN L + GA  + Q     NE L  ++L+ N+++
Sbjct: 705 GAQAIAAALKENDKITHVDLSANKLGNAGASHIRQVLD-DNEVLEGVNLSENKLQ 758



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 1/231 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +  R    E L  L   L +N   + +S     +    ++     L +   L+ L L  N
Sbjct: 528 LDDRPLSQEALRALTAVLAHNYHLKTLSLENAELEDNDVRRLAPALAALTHLRVLKLGKN 587

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I   G   + + L     +E L L+  ++ DEGA A+A+ L + S LRV++L+ + +  
Sbjct: 588 KISSAGAAAVAEALPKMKSLEELYLNENEIGDEGADALAQALAHKSSLRVVDLSASKVSD 647

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  ++A AL E   + SL L+ N     GA ALA  L    +L  +HL GN I DEG +
Sbjct: 648 KGAAAIAGALTEEHGLGSLILSRNAITDEGAQALAALLRRRTALESIHLGGNGISDEGAQ 707

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           A+ + L     K+  +D+  N +   GA H+ + + + + L  +NL  N +
Sbjct: 708 AIAAALKE-NDKITHVDLSANKLGNAGASHIRQVLDDNEVLEGVNLSENKL 757



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 3/216 (1%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           VL + +  +S +    +   + +   L  ++L   ++ D    ++A AL     +  + L
Sbjct: 525 VLHLDDRPLSQEALRALTAVLAHNYHLKTLSLENAELEDNDVRRLAPALAALTHLRVLKL 584

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
           G N I S GA+A+A  L     +  L L  N IG +GA AL++ L    ++  + L   +
Sbjct: 585 GKNKISSAGAAAVAEALPKMKSLEELYLNENEIGDEGADALAQALAHKSSLRVVDLSASK 644

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +   GA  +A  L   + +  L L  N + DEGA+ LA   +    AL SI L  N I D
Sbjct: 645 VSDKGAAAIAGALTEEHGLGSLILSRNAITDEGAQALAALLRRRT-ALESIHLGGNGISD 703

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           +GA AIA ALK N+   +T ++L+ N L   G S +
Sbjct: 704 EGAQAIAAALKEND--KITHVDLSANKLGNAGASHI 737



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 78/152 (51%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           +++   + ++    GDEG   LA++L +  +   V  +A+ ++  G  A  G L     L
Sbjct: 604 MKSLEELYLNENEIGDEGADALAQALAHKSSLRVVDLSASKVSDKGAAAIAGALTEEHGL 663

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            +L LS N I DEG + L  +L     +E + L    + DEGA+AIA  LK N  +  ++
Sbjct: 664 GSLILSRNAITDEGAQALAALLRRRTALESIHLGGNGISDEGAQAIAAALKENDKITHVD 723

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+ N +  +G + + + L +N  +  ++L+ N
Sbjct: 724 LSANKLGNAGASHIRQVLDDNEVLEGVNLSEN 755



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 62/120 (51%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+S     D+G   +A +L        +  + N IT  G +A   +L+   AL++++L 
Sbjct: 638 VDLSASKVSDKGAAAIAGALTEEHGLGSLILSRNAITDEGAQALAALLRRRTALESIHLG 697

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN I DEG + +   L +N  +  + LS+  L + GA  I ++L +N +L  + L+ N +
Sbjct: 698 GNGISDEGAQAIAAALKENDKITHVDLSANKLGNAGASHIRQVLDDNEVLEGVNLSENKL 757



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 45/100 (45%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E     S+ +S     DEG   LA  L      E +    NGI+  G +A    L+ N  
Sbjct: 659 EEHGLGSLILSRNAITDEGAQALAALLRRRTALESIHLGGNGISDEGAQAIAAALKENDK 718

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           +  ++LS N +G+ G   +  +L DN  +E + LS   L+
Sbjct: 719 ITHVDLSANKLGNAGASHIRQVLDDNEVLEGVNLSENKLQ 758


>gi|350591707|ref|XP_003358721.2| PREDICTED: leucine-rich repeat-containing protein 34 [Sus scrofa]
          Length = 390

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 6/218 (2%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N IS  GA++ A+ ++   +L+++NL  NDIG EG E IA AL +N T+  + + 
Sbjct: 86  LDVRYNRISDVGAYYAAKLLQKQHNLIYLNLMFNDIGPEGGEVIAKALHKNTTLKHLRMT 145

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I +KG    A +L+ NS +  LDL    +  +    L+ +LK +  +  L L    I
Sbjct: 146 GNKIKNKGGMFFATMLQINSSLEKLDLGDCDL-EESTVHLAHMLKENQCLVELHLSKHDI 204

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             SG + + D L  N  +  LD+  N +  +G  CLA   K  N  L  IDL+FN I + 
Sbjct: 205 KNSGMKHLCDALYLNRCLRYLDISCNKITQDGMACLADILK-SNTTLEVIDLSFNRIENA 263

Query: 544 GAFAIAQALKAN----EDVAVTSLNLANNFLTKFGQSA 577
           GA  ++  L A+    + ++V S N+    L    QS 
Sbjct: 264 GANYLSDTLAAHNRTLKALSVVSNNIEGEGLVALSQSV 301



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 131/310 (42%), Gaps = 64/310 (20%)

Query: 222 TLNLSGNP-------IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           T+N++GN        I  E    LC IL +N  +  L +    + D GA   A+LL+   
Sbjct: 50  TVNIAGNSRLMMVERITGEDFWILCRILKNNPYINGLDVRYNRISDVGAYYAAKLLQKQH 109

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L L  N I   G   +A+AL +N+T++ L + GN     G    A  L+ N SL +
Sbjct: 110 NLIYLNLMFNDIGPEGGEVIAKALHKNTTLKHLRMTGNKIKNKGGMFFATMLQINSSLEK 169

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
                                        LD+G+  +  +   H+A  +K  + L+ ++L
Sbjct: 170 -----------------------------LDLGDCDLE-ESTVHLAHMLKENQCLVELHL 199

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             +DI + G + + DAL  NR +  +D+  N I   G + +A +LK N+ +  +DL++N 
Sbjct: 200 SKHDIKNSGMKHLCDALYLNRCLRYLDISCNKITQDGMACLADILKSNTTLEVIDLSFNR 259

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           I   GA  LS+ L  H                           N T+  L + +N +  E
Sbjct: 260 IENAGANYLSDTLAAH---------------------------NRTLKALSVVSNNIEGE 292

Query: 515 GAKCLAQSFK 524
           G   L+QS K
Sbjct: 293 GLVALSQSVK 302



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 1/218 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+      D G ++ A+ L        ++   N I   G +     L  N  LK L ++
Sbjct: 86  LDVRYNRISDVGAYYAAKLLQKQHNLIYLNLMFNDIGPEGGEVIAKALHKNTTLKHLRMT 145

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN I ++G      +L  N+ +E+L L   DL +E    +A +LK N  L  L L+ + I
Sbjct: 146 GNKIKNKGGMFFATMLQINSSLEKLDLGDCDL-EESTVHLAHMLKENQCLVELHLSKHDI 204

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             SG   L +AL  N  +R L ++ N     G   LA  L+ N +L  + L  N I + G
Sbjct: 205 KNSGMKHLCDALYLNRCLRYLDISCNKITQDGMACLADILKSNTTLEVIDLSFNRIENAG 264

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
              L   L++    L  L + +N+I  +G   +++ +K
Sbjct: 265 ANYLSDTLAAHNRTLKALSVVSNNIEGEGLVALSQSVK 302



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 91/177 (51%), Gaps = 2/177 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M+G    ++G  F A  L  N + E++      +  + +     +L+ N  L  L+LS +
Sbjct: 144 MTGNKIKNKGGMFFATMLQINSSLEKLDLGDCDLEESTVH-LAHMLKENQCLVELHLSKH 202

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I + G+K LCD L  N  +  L +S   +  +G   +A++LK+N+ L V++L+ N I+ 
Sbjct: 203 DIKNSGMKHLCDALYLNRCLRYLDISCNKITQDGMACLADILKSNTTLEVIDLSFNRIEN 262

Query: 289 SGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           +G   L++ L   N T+++L +  N     G  AL++ ++ N +   +++ GN   +
Sbjct: 263 AGANYLSDTLAAHNRTLKALSVVSNNIEGEGLVALSQSVKRNPTFSNIYIWGNKFDE 319


>gi|156229394|emb|CAM28209.1| Ran GTPase activating protein [Nicotiana benthamiana]
          Length = 407

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L    + I  E  + + +++     ++ L   
Sbjct: 128 LNLSDNALGEKGVRAFGKLLQSQTNLEELYFINDGISQEAARAVSELVPSTEKLKVLHFH 187

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G ++L EAL   S ++ L L  N  
Sbjct: 188 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCEALGMCSHLKKLDLRDNMF 247

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L+K L  ++ L E++L   ++ DEG  A+ + L      L+VL++  N I+ +
Sbjct: 248 GPEAGLVLSKALSKHEKLTEVYLSYLNLEDEGATAIANALKDSAPSLSVLEMAGNDITQE 307

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 308 AAPAIASCIAAKQFLSKLSLGENELMDEGAIQIAKALRGHNHLKEVDMNTNTLRRAGARV 367

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +AR +        L++  N I  +G   L ++ K
Sbjct: 368 LARTVLHKDEFKLLNVNGNFISEEGVDELKDIFK 401



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 143/312 (45%), Gaps = 30/312 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L   +  +  E A+A++EL+ +   L+VL
Sbjct: 125 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELYFINDGISQEAARAVSELVPSTEKLKVL 184

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G +AL + L     L++L L  
Sbjct: 185 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCEALGMCSHLKKLDLRD 244

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +    V                         L ++NL     
Sbjct: 245 NMFGPEAGLVLSKALSKHEKLTEVY------------------------LSYLNLE---- 276

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  +++ +++ GN+I  + A AIA  +     ++ L L  N +  +
Sbjct: 277 -DEGATAIANALKDSAPSLSVLEMAGNDITQEAAPAIASCIAAKQFLSKLSLGENELMDE 335

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 336 GAIQIAKALRGHNHLKEVDMNTNTLRRAGARVLARTVLHKDEFKLLNVNGNFISEEGVDE 395

Query: 519 LAQSFKVVNEAL 530
           L   FK   E L
Sbjct: 396 LKDIFKKSPEML 407



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L   N+ IS + A  V
Sbjct: 114 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELYFINDGISQEAARAV 171

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G SA+   L
Sbjct: 172 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCEAL 231

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    LS+ L  H  +  + L +  +   GA  +A+ L+ + 
Sbjct: 232 GMCSHLKKLDLRDNMFGPEAGLVLSKALSKHEKLTEVYLSYLNLEDEGATAIANALKDSA 291

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++S+L++  N +  E A  +A       + L+ + L  NE+ D+GA  IA+AL+ +  +
Sbjct: 292 PSLSVLEMAGNDITQEAAPAIASCI-AAKQFLSKLSLGENELMDEGAIQIAKALRGHNHL 350

Query: 559 AVTSLNLANNFLTKFGQSAL 578
               +N   N L + G   L
Sbjct: 351 KEVDMN--TNTLRRAGARVL 368



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 2/244 (0%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           +E+ + ++E          +       GDEG   +AE +  +   E+   ++  + + G 
Sbjct: 165 QEAARAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGG 224

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
            A    L     LK L+L  N  G E    L   L  +  +  + LS ++L DEGA AIA
Sbjct: 225 SALCEALGMCSHLKKLDLRDNMFGPEAGLVLSKALSKHEKLTEVYLSYLNLEDEGATAIA 284

Query: 268 ELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
             LK+++  L VLE+  N I      ++A  +     +  L L  N     GA  +AK L
Sbjct: 285 NALKDSAPSLSVLEMAGNDITQEAAPAIASCIAAKQFLSKLSLGENELMDEGAIQIAKAL 344

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
            G+  L+E+ ++ N++   G R L   +   K +  +L++  N IS +G   + +  K  
Sbjct: 345 RGHNHLKEVDMNTNTLRRAGARVLARTV-LHKDEFKLLNVNGNFISEEGVDELKDIFKKS 403

Query: 387 KSLL 390
             +L
Sbjct: 404 PEML 407


>gi|20467213|gb|AAM22460.1| CARD15-like protein [Homo sapiens]
          Length = 195

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 99/174 (56%), Gaps = 3/174 (1%)

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IG +GA+ +ADALK NRT+T++ L GN +   GA ++A  L  N  ++ L L  N IG
Sbjct: 4   NSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIG 63

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             GA+ +++ LK + ++  L      IG  GA+ +A+ L+ N  +  LDL++N + D G 
Sbjct: 64  PMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGV 123

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
             L  +    N+ L S+ L  N I  +GA AIA AL AN    + +L+L  NF+
Sbjct: 124 AALMGAL-CTNQTLLSLSLRENSISPEGAQAIAHALCANS--TLKNLDLQWNFI 174



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 111/224 (49%), Gaps = 29/224 (12%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           L GN IG +G K L D L  N  +  L L    +RD+GA+++AE L +N  L +L L  N
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKN 60

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            I   G   +A+AL +N +++ L  + N  G  GA ALA+ L+ N+ L  L L  NSI D
Sbjct: 61  SIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISD 120

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            G+ ALM  L +                              ++LL ++L  N I  EGA
Sbjct: 121 AGVAALMGALCTN-----------------------------QTLLSLSLRENSISPEGA 151

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           + IA AL  N T+  +DL  N I +  A A+ + L+ N  +TSL
Sbjct: 152 QAIAHALCANSTLKNLDLQWNFIQAGAAQALGQALQLNRSLTSL 195



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 1/173 (0%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L GNSIG +G +AL   L   +  L  L +  N++   GA  +AE + + ++L  ++L  
Sbjct: 1   LRGNSIGPQGAKALADALKINR-TLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQK 59

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IG  GA+++ADALKQNR++  +    N+I   GA A+A  LK N  + SLDL  N I 
Sbjct: 60  NSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSIS 119

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
             G  AL   L  +  + +L L    I   GA+ +A  L  N+T+  LDL+ N
Sbjct: 120 DAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLQWN 172



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 1/172 (0%)

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           NSI  +GA  +A+ +K  ++L  ++L  N + D+GA  +A+AL  NRT++ + L  N+I 
Sbjct: 4   NSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIG 63

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             GA  +A  LK N  +  L  + N IG  GAKAL+E LK +  + +L L    I  +G 
Sbjct: 64  PMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGV 123

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
             +   L  N T+  L LR N +  EGA+ +A +    N  L ++DL +N I
Sbjct: 124 AALMGALCTNQTLLSLSLRENSISPEGAQAIAHAL-CANSTLKNLDLQWNFI 174



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 3/160 (1%)

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L GN+I  +GA A+A  LK N  +TSL L  N +  DGA++++E L  +  ++ L L   
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKN 60

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
            IG  GA+ +AD L+ N ++  L   +N + D GAK LA++ KV N+ L S+DL  N I 
Sbjct: 61  SIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKV-NQGLESLDLQSNSIS 119

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           D G  A+  AL  N+   + SL+L  N ++  G  A+  A
Sbjct: 120 DAGVAALMGALCTNQ--TLLSLSLRENSISPEGAQAIAHA 157



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 88/174 (50%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G + G +G   LA++L  N+T   +S   N +   G ++    L SN  L  L+L  N
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKN 60

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IG  G + + D L  N  ++ L  SS  + D GAKA+AE LK N  L  L+L +N I  
Sbjct: 61  SIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISD 120

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +G  +L  AL  N T+ SL L  N     GA A+A  L  N +L+ L L  N I
Sbjct: 121 AGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLQWNFI 174



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 74/152 (48%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  +S+ + G    D+G   +AE+L  N+T   +    N I   G +     L+ N +LK
Sbjct: 22  RTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLK 81

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L  S N IGD G K L + L  N G+E L L S  + D G  A+   L  N  L  L L
Sbjct: 82  ELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSL 141

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
             N I   G  ++A AL  NST+++L L  N+
Sbjct: 142 RENSISPEGAQAIAHALCANSTLKNLDLQWNF 173


>gi|256066525|ref|XP_002570552.1| hypothetical protein [Schistosoma mansoni]
 gi|360043874|emb|CCD81420.1| putative leucine rich repeat-containing [Schistosoma mansoni]
          Length = 424

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 146/309 (47%), Gaps = 28/309 (9%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRD 260
           +T+  +      L     +  L+L  N I DEGV+ LC+ L VDN  +E L L   D+ +
Sbjct: 74  LTSVDLPPLCMALSLKPCITMLDLRYNFIKDEGVEILCEFLNVDNL-LEELNLMCNDITE 132

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           +GA+ +A  LKNN  L +L++  N I   G    A+AL  N T+  + L           
Sbjct: 133 KGAQFLANSLKNNRNLVILKMTGNPIGSKGGLYFAQALQINDTLEFIDLGECDQDITSCI 192

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           A A  L+ N+S                   M G++  +  L  L         +   H A
Sbjct: 193 AFATVLKSNRS-------------------MIGINLNRQILWTL-------QEESTVHFA 226

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +   K+L  ++L   D+ D GA ++A+AL++N T+  +D+  N +   GA  ++RV+ 
Sbjct: 227 DMLCINKTLKELHLAKCDMRDFGAARLAEALERNDTLELLDISANRVSRDGAILLSRVIS 286

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +  LDLA+N +   GA AL+  L ++ ++  L + +C++   G   +A+ L  N T
Sbjct: 287 INCTLVVLDLAFNRVQCKGAMALANALIYNTHLKVLAVQFCELKGPGLCALAESLITNLT 346

Query: 501 ISILDLRAN 509
           +  + +  N
Sbjct: 347 LECIYIWGN 355



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 5/262 (1%)

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           HL+     ++    L   L     +  L L  N I DEG+  L   L+     L  L++ 
Sbjct: 68  HLDAIQLTSVDLPPLCMALSLKPCITMLDLRYNFIKDEGVEILCEFLNV-DNLLEELNLM 126

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N I+ KGA  +A  +KN ++L+ + +  N IG +G    A AL+ N T+  IDLG  + 
Sbjct: 127 CNDITEKGAQFLANSLKNNRNLVILKMTGNPIGSKGGLYFAQALQINDTLEFIDLGECDQ 186

Query: 428 HSKGASAIARVLKDNSVITSLDLAYN---PIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
                 A A VLK N  +  ++L       +  +     +++L  +  +  L L  C + 
Sbjct: 187 DITSCIAFATVLKSNRSMIGINLNRQILWTLQEESTVHFADMLCINKTLKELHLAKCDMR 246

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG 544
             GA  +A+ L  N+T+ +LD+ AN +  +GA  L++   + N  L  +DLAFN ++  G
Sbjct: 247 DFGAARLAEALERNDTLELLDISANRVSRDGAILLSRVISI-NCTLVVLDLAFNRVQCKG 305

Query: 545 AFAIAQALKANEDVAVTSLNLA 566
           A A+A AL  N  + V ++   
Sbjct: 306 AMALANALIYNTHLKVLAVQFC 327



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 143/315 (45%), Gaps = 10/315 (3%)

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           +N  ++ +QL+SVDL       +   L     + +L+L  N I   G   L E L  ++ 
Sbjct: 65  NNHHLDAIQLTSVDL-----PPLCMALSLKPCITMLDLRYNFIKDEGVEILCEFLNVDNL 119

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           +  L+L  N     GA  LA  L+ N++L  L + GN IG +G       L      L  
Sbjct: 120 LEELNLMCNDITEKGAQFLANSLKNNRNLVILKMTGNPIGSKGGLYFAQALQI-NDTLEF 178

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINL---YMNDIGDEGAEKIADALKQNRTITTI 420
           +D+G            A  +K+ +S++ INL    +  + +E     AD L  N+T+  +
Sbjct: 179 IDLGECDQDITSCIAFATVLKSNRSMIGINLNRQILWTLQEESTVHFADMLCINKTLKEL 238

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
            L   ++   GA+ +A  L+ N  +  LD++ N +  DGA  LS V+  +  +  L L +
Sbjct: 239 HLAKCDMRDFGAARLAEALERNDTLELLDISANRVSRDGAILLSRVISINCTLVVLDLAF 298

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            ++   GA  +A+ L YN  + +L ++   L+  G   LA+S  + N  L  I +  NE 
Sbjct: 299 NRVQCKGAMALANALIYNTHLKVLAVQFCELKGPGLCALAESL-ITNLTLECIYIWGNEH 357

Query: 541 RDDGAFAIAQALKAN 555
            +    A A  +  N
Sbjct: 358 EESACNAFANLIYIN 372



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 132/305 (43%), Gaps = 5/305 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +D+      DEG+  L E L  +   EE++   N IT  G +     L++N  L  
Sbjct: 91  CITMLDLRYNFIKDEGVEILCEFLNVDNLLEELNLMCNDITEKGAQFLANSLKNNRNLVI 150

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L ++GNPIG +G       L  N  +E + L   D       A A +LK+N  +  + LN
Sbjct: 151 LKMTGNPIGSKGGLYFAQALQINDTLEFIDLGECDQDITSCIAFATVLKSNRSMIGINLN 210

Query: 283 NNM---IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +   +        A+ L  N T++ LHL        GA  LA+ LE N +L  L +  
Sbjct: 211 RQILWTLQEESTVHFADMLCINKTLKELHLAKCDMRDFGAARLAEALERNDTLELLDISA 270

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +  +G   L+S + S    L VLD+  N +  KGA  +A  +     L  + +   ++
Sbjct: 271 NRVSRDG-AILLSRVISINCTLVVLDLAFNRVQCKGAMALANALIYNTHLKVLAVQFCEL 329

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              G   +A++L  N T+  I + GN       +A A ++  N ++ +      P   DG
Sbjct: 330 KGPGLCALAESLITNLTLECIYIWGNEHEESACNAFANLIYINRLLENCT-DIKPYIVDG 388

Query: 460 AKALS 464
              L+
Sbjct: 389 RTCLA 393



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 8/236 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R    + M+G   G +G  + A++L  N T E +             AF  VL+SN ++ 
Sbjct: 146 RNLVILKMTGNPIGSKGGLYFAQALQINDTLEFIDLGECDQDITSCIAFATVLKSNRSMI 205

Query: 222 TLNLSGN---PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            +NL+      + +E      D+L  N  ++ L L+  D+RD GA  +AE L+ N  L +
Sbjct: 206 GINLNRQILWTLQEESTVHFADMLCINKTLKELHLAKCDMRDFGAARLAEALERNDTLEL 265

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+++ N +   G   L+  +  N T+  L L  N     GA ALA  L  N  L+ L + 
Sbjct: 266 LDISANRVSRDGAILLSRVISINCTLVVLDLAFNRVQCKGAMALANALIYNTHLKVLAVQ 325

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGN-NSISAKGAF----HVAEYIKNCKSL 389
              +   G+ AL   L +      +   GN +  SA  AF    ++   ++NC  +
Sbjct: 326 FCELKGPGLCALAESLITNLTLECIYIWGNEHEESACNAFANLIYINRLLENCTDI 381



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 8/152 (5%)

Query: 420 IDLGGNNIH-------SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           + L GNN H       S     +   L     IT LDL YN I  +G + L E L     
Sbjct: 60  LKLCGNNHHLDAIQLTSVDLPPLCMALSLKPCITMLDLRYNFIKDEGVEILCEFLNVDNL 119

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           +  L L    I   GA+F+A+ L+ N  + IL +  N +  +G    AQ+ ++ N+ L  
Sbjct: 120 LEELNLMCNDITEKGAQFLANSLKNNRNLVILKMTGNPIGSKGGLYFAQALQI-NDTLEF 178

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           IDL   +       A A  LK+N  +   +LN
Sbjct: 179 IDLGECDQDITSCIAFATVLKSNRSMIGINLN 210


>gi|399497954|emb|CCG20305.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNCISEEGVDELKEIFK 492



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEG   IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNCISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +G  AIA ALK +   ++  L +A N +T
Sbjct: 369 EGVIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|29838679|gb|AAN52483.1| NOD2 [Mus musculus castaneus]
          Length = 1013

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLKALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 282 NNNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGN 329
             +M    GF  L  +L E          +R L   HL   +   G     ALA  L+  
Sbjct: 703 TKSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHL 762

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +    L L  NS+GD G+  L   L    G    L + +N+IS +GA  + E    C+ L
Sbjct: 763 QRPVALQLDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQL 818

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L 
Sbjct: 819 QKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLG 878

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +G  G +AL+EV+  H N+  L L    IG+ GA+ +A ML  N ++  L L  N
Sbjct: 879 FWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEEN 938

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + DEG   LA+  K  N  L  + L+ N I   GA A+ +AL  N  +
Sbjct: 939 HICDEGVYSLAEGLK-RNSTLKFLKLSNNGITYRGAEALLKALSRNSAI 986



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL K L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLKALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLKALSRNSAILEV 989

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 990  WLRGNTFSLEEIQTLS 1005



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLKALSRNSAILEVWLRGN 994


>gi|397477084|ref|XP_003809912.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 5 isoform 1
            [Pan paniscus]
          Length = 1198

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 181/416 (43%), Gaps = 33/416 (7%)

Query: 169  MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSG 227
            M G+   +E        LG +    ++   ++ +T   +K     L+ S   ++TL    
Sbjct: 758  MRGKTLIEEQWEDFCSVLGTHPHLRQLDLGSSILTERAMKTLCAKLRHSTCKIQTLMFRN 817

Query: 228  NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
              I   GV+ L  IL+ N  +  L L    L++E  +   E LK+   L    L +  +D
Sbjct: 818  AQI-TPGVQHLWRILMANRNLRSLNLGGTHLKEEDVRMACEALKHPKCL----LESLRLD 872

Query: 288  YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
              G T             + +L            +++ L  + SL+ L L GN + D+G+
Sbjct: 873  CCGLT------------HACYLK-----------ISQILTTSPSLKSLSLAGNKVTDQGV 909

Query: 348  RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
              L   L   +  L  L + +  I+A G   +A  + + +SL  + L  N +G+EG   +
Sbjct: 910  TPLSDALRVSQCALQKLILEDCGITATGCQSLASALVSNRSLTHLCLSNNSLGNEGVNLL 969

Query: 408  ADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
              +++  + ++  + L   ++ + G   +A  L  NS +T L L+ NP+  +G K L EV
Sbjct: 970  CRSMRLPHCSLQRLMLNQCHLDTAGCGFLALALMGNSWLTHLSLSMNPVEDNGVKLLCEV 1029

Query: 467  LKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            ++    ++  L+L  C + A+  E ++ ++  +  +  LDL  N L D G   L +  K 
Sbjct: 1030 MREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSLDLTDNALGDGGVAALCEGLKQ 1089

Query: 526  VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             N  LT + L    +  D   A++ AL  N    +TSLNL  N  +  G   L  A
Sbjct: 1090 KNSVLTRLGLKACGLTSDCCEALSLALSCNRH--LTSLNLVQNNFSPKGMMKLCSA 1143



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 162/373 (43%), Gaps = 4/373 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+      +  +  L   L ++    +     N     G++    +L +N  L++LNL 
Sbjct: 784  LDLGSSILTERAMKTLCAKLRHSTCKIQTLMFRNAQITPGVQHLWRILMANRNLRSLNLG 843

Query: 227  GNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            G  + +E V+  C+ L      +E L+L    L       I+++L  +  L+ L L  N 
Sbjct: 844  GTHLKEEDVRMACEALKHPKCLLESLRLDCCGLTHACYLKISQILTTSPSLKSLSLAGNK 903

Query: 286  IDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +   G T L++AL +    ++ L L      A G  +LA  L  N+SL  L L  NS+G+
Sbjct: 904  VTDQGVTPLSDALRVSQCALQKLILEDCGITATGCQSLASALVSNRSLTHLCLSNNSLGN 963

Query: 345  EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            EG+  L   +      L  L +    +   G   +A  +     L  ++L MN + D G 
Sbjct: 964  EGVNLLCRSMRLPHCSLQRLMLNQCHLDTAGCGFLALALMGNSWLTHLSLSMNPVEDNGV 1023

Query: 405  EKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            + + + +++    +  ++L   ++ +    +++ V+  +  + SLDL  N +G  G  AL
Sbjct: 1024 KLLCEVMREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSLDLTDNALGDGGVAAL 1083

Query: 464  SEVLKFHGNINT-LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
             E LK   ++ T L L  C + +   E ++  L  N  ++ L+L  N    +G   L  +
Sbjct: 1084 CEGLKQKNSVLTRLGLKACGLTSDCCEALSLALSCNRHLTSLNLVQNNFSPKGMMKLCSA 1143

Query: 523  FKVVNEALTSIDL 535
            F      L  I L
Sbjct: 1144 FACPTSNLQIIGL 1156


>gi|29838643|gb|AAN52480.1| NOD2 [Mus musculus musculus]
 gi|29838655|gb|AAN52481.1| NOD2 [Mus musculus musculus]
          Length = 1013

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 282 NNNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGN 329
             +M    GF  L  +L E          +R L   HL   +   G     ALA  L+  
Sbjct: 703 TKSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHL 762

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +    L L  NS+GD G+  L   L    G    L + +N+IS +GA  + E    C+ L
Sbjct: 763 QRPVALQLDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQL 818

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L 
Sbjct: 819 QKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLG 878

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +G  G +AL+EV+  H N+  L L    IG+ GAE +A ML  N ++  L L  N
Sbjct: 879 FWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEEN 938

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + DEG   LA+  K  N  L  + L+ N I   GA A+ QAL  N  +
Sbjct: 939 HICDEGVYSLAEGLK-RNSTLKFLKLSNNGITYRGAEALLQALSRNSAI 986



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAEALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKS 929

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 990  WLRGNTFSLEEIQTLS 1005



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|148679112|gb|EDL11059.1| caspase recruitment domain family, member 15 [Mus musculus]
          Length = 1020

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 129/270 (47%), Gaps = 10/270 (3%)

Query: 294 LAEALLENSTIRSL---HLNGNYG--GALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           + E  L    +R L   HL   +   G     ALA  L+  +    L L  NS+GD G+ 
Sbjct: 729 MQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVE 788

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            L   L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A
Sbjct: 789 QLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMA 844

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L   +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+ 
Sbjct: 845 KLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVA 904

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
            H N+  L L    IG+ GAE +A ML  N ++  L L  N + DEG   LA+  K  N 
Sbjct: 905 DHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHICDEGVYSLAEGLK-RNS 963

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            L  + L+ N I   GA A+ QAL  N  +
Sbjct: 964 TLKFLKLSNNGITYRGAEALLQALSRNSAI 993



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 748  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 801

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 802  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 861

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 862  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 920

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 921  SMGAEALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 980

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 981  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1012



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 813  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 872

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 873  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLE 932

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 933  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 992

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 993  ILEVWLRGNTFSLEEIQT----LSSRDARL 1018



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 761  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 817

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 818  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 876

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 877  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKS 936

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 937  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 996

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 997  WLRGNTFSLEEIQTLS 1012



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 828  LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 887

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 888  GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHI 947

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
             DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 948  CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 1001


>gi|83977454|ref|NP_665856.2| nucleotide-binding oligomerization domain-containing protein 2 [Mus
           musculus]
 gi|29838775|gb|AAN57787.1| NOD2 [Mus musculus]
 gi|29838799|gb|AAN57789.1| NOD2 [Mus musculus]
 gi|29838859|gb|AAN63034.1| NOD2 [Mus musculus]
 gi|29839003|gb|AAN60735.1| NOD2 [Mus musculus molossinus]
 gi|29839015|gb|AAN60736.1| NOD2 [Mus musculus molossinus]
 gi|29839063|gb|AAN62470.1| NOD2 [Mus musculus]
 gi|29839075|gb|AAN62471.1| NOD2 [Mus musculus]
 gi|29839099|gb|AAN63035.1| NOD2 [Mus musculus]
 gi|29839135|gb|AAN63039.1| NOD2 [Mus musculus]
 gi|30017189|gb|AAN52477.1| NOD2 [Mus musculus]
 gi|195934835|gb|AAI68407.1| Nucleotide-binding oligomerization domain containing 2 [synthetic
           construct]
          Length = 1013

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 282 NNNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGN 329
             +M    GF  L  +L E          +R L   HL   +   G     ALA  L+  
Sbjct: 703 TKSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHL 762

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +    L L  NS+GD G+  L   L    G    L + +N+IS +GA  + E    C+ L
Sbjct: 763 QRPVALQLDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQL 818

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L 
Sbjct: 819 QKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLG 878

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +G  G +AL+EV+  H N+  L L    IG+ GAE +A ML  N ++  L L  N
Sbjct: 879 FWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEEN 938

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + DEG   LA+  K  N  L  + L+ N I   GA A+ QAL  N  +
Sbjct: 939 HICDEGVYSLAEGLK-RNSTLKFLKLSNNGITYRGAEALLQALSRNSAI 986



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAEALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKS 929

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 990  WLRGNTFSLEEIQTLS 1005



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|29838691|gb|AAN52484.1| NOD2 [Mus musculus castaneus]
          Length = 1013

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLKALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 282 NNNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGN 329
             +M    GF  L  +L E          +R L   HL   +   G     ALA  L+  
Sbjct: 703 TKSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHL 762

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +    L L  NS+GD G+  L   L    G    L + +N+IS +GA  + E    C+ L
Sbjct: 763 QRPVALQLDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQL 818

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L 
Sbjct: 819 QKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLG 878

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +G  G +AL+EV+  H N+  L L    IG+ GA+ +A ML  N ++  L L  N
Sbjct: 879 FWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEEN 938

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + DEG   LA+  K  N  L  + L+ N I   GA A+ +AL  N  +
Sbjct: 939 HICDEGVYSLAEGLK-RNSTLKFLKLSNNGITYRGAEALLKALSRNSAI 986



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL K L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLKALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLKALSRNSAILEV 989

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 990  WLRGNTFSLEEIQTLS 1005



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLKALSRNSAILEVWLRGN 994


>gi|109128476|ref|XP_001084287.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Macaca mulatta]
          Length = 1044

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 5/244 (2%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L   +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 779  GPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 834

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 835  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGARV 894

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 895  LAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 954

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            L  N  +  L L  N L+DEG  CLA+  K  N +L  + L+ N I   GA A+ QAL+ 
Sbjct: 955  LAKNVMLEELCLEENHLQDEGVCCLAEGLK-RNSSLKILKLSNNCITYLGAEALLQALER 1013

Query: 555  NEDV 558
            N+ +
Sbjct: 1014 NDTI 1017



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 135/269 (50%), Gaps = 4/269 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 768  VGHLKLTFCSVGPAECAALAFVLRHLRQPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 824

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 825  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 883

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 884  NNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 943

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G   L+E LK + ++  LKL    I   G
Sbjct: 944  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNNCITYLG 1003

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGA 516
            AE +   L  N+TI  + LR N    E A
Sbjct: 1004 AEALLQALERNDTILEVWLRGNTFSLEEA 1032



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 127/278 (45%), Gaps = 8/278 (2%)

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
            G N    +++F + G       AF  VL+       L L  N +GD GV+ L   L    
Sbjct: 765  GLNVGHLKLTFCSVGPAECAALAF--VLRHLRQPVALQLDYNSVGDIGVEQLLPCL---- 818

Query: 247  GVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
            GV + L L   ++ D G   + E   +   L+ L L NN +      S+A+ L       
Sbjct: 819  GVCKALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFL 878

Query: 306  SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            +L L  N+  A GA  LA+GL GN SL+ L   GN +GDEG +AL   L   +  L  L 
Sbjct: 879  ALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEALGDHQS-LRWLS 937

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +  N+I + GA  +A  +     L  + L  N + DEG   +A+ LK+N ++  + L  N
Sbjct: 938  LVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRNSSLKILKLSNN 997

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             I   GA A+ + L+ N  I  + L  N    + A  L
Sbjct: 998  CITYLGAEALLQALERNDTILEVWLRGNTFSLEEADKL 1035



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 85/164 (51%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 867  MAKLLACRQNFLALRLGNNHITAAGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAEA 926

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G   LAE L  N
Sbjct: 927  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAEGLKRN 986

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E
Sbjct: 987  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLE 1030



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 87/174 (50%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F ++ +   +    G   LAE L  N + + + F 
Sbjct: 852  LALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGARVLAEGLRGNASLQFLGFW 911

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A    L  + +L+ L+L GN IG  G + L  +L  N  +E L L    L
Sbjct: 912  GNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHL 971

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            +DEG   +AE LK NS L++L+L+NN I Y G  +L +AL  N TI  + L GN
Sbjct: 972  QDEGVCCLAEGLKRNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGN 1025



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 29/235 (12%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 830  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 889

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  NA ++ L      + DEGA+A+AE                        
Sbjct: 890  AGARVLAEGLRGNASLQFLGFWGNRVGDEGAQALAE------------------------ 925

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
                AL ++ ++R L L GN  G++GA ALA  L  N  L EL L  N + DEG+  L  
Sbjct: 926  ----ALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCCLAE 981

Query: 353  GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            GL  R   L +L + NN I+  GA  + + ++   ++L + L  N    E A+K+
Sbjct: 982  GL-KRNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEADKL 1035


>gi|399498034|emb|CCG20345.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E V  +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAVNAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +I  AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIVKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E   A+ EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAVNAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEG   IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  + + L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIVKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 130/260 (50%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS +    V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAVNAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  I +AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIVKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 5/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S ++ L+L+ N  G  G  A  K L+   +L EL L  + I  E + A+   + S +
Sbjct: 211 LEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAVNAVCELVPSTE 270

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE +K    L         +G EG   + +AL     + 
Sbjct: 271 -KLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +    + + L  +  +T + L+Y  +  +G  A++  LK    ++  L+
Sbjct: 330 KLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLE 389

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I A  A  +A  +     ++ L L  N L+DEGA  + ++ +  +  L  +D++ 
Sbjct: 390 MAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIVKALEG-HSHLIEVDMSS 448

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  +  +A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAVNAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +G  AIA ALK +   ++  L +A N +T
Sbjct: 369 EGVIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|403369389|gb|EJY84539.1| Leucine Rich Repeat family protein [Oxytricha trifallax]
          Length = 825

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 178/381 (46%), Gaps = 11/381 (2%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           L++ +  NQ    +    N +   G+K     +  +  +  L+LS N I  +G K +   
Sbjct: 240 LSQIIAVNQNIAHIDLKKNLLGDEGVKILIKAISKSKNIVHLDLSSNQITHKGAKKIFTS 299

Query: 242 LVDNAGVERLQLSSVD------LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           L+ N  +  L+L S+D      +  +G + +  LL+++  L+ L+L +N++  +G  +L 
Sbjct: 300 LLPNCSLISLKLGSIDGVNKNKVGQKGVQHLIPLLQHSKFLQFLDLRSNILSDNGIVTLC 359

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           +AL +N T+ SL+L  N   + G   L   L     L EL L GN +G++GI  L   +S
Sbjct: 360 DALFQNKTLVSLNLGSNEITSYGMERLKDALLTT-VLNELDLTGNPLGNQGIDYLGQYMS 418

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                L  L+I      + G+  + + ++ C SL  + L  ND+    +  +   +    
Sbjct: 419 HADCNLVRLNISECRFQSPGSILLFQAVRKCSSLKHLILDKNDLKSRNSSYLTTGIYHG- 477

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-KFHGNIN 474
            +T + +   N+      ++A  L  +  + +L L YN +  + AK L+E L K   NI 
Sbjct: 478 -LTYLSMIRCNLGDDEGISVAEGLSRSRQLKALILQYNSLSDEAAKTLAEALAKPTVNIE 536

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
            L L   +I  +G + +   L  N+ +S L+L++  L++      A+S K  N  +  +D
Sbjct: 537 HLDLSHNKINDAGGQLIGISLGQNSLLSKLNLKSINLKETTGSLFAKSVK-QNSQIQFLD 595

Query: 535 LAFNEIRDDGAFAIAQALKAN 555
           L+ N +  +    I Q L+ N
Sbjct: 596 LSKNSVPVNFIEDIEQQLQVN 616



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 145/320 (45%), Gaps = 45/320 (14%)

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           T L++ +  N  I  + L  N  G  G   L K +  +K++  L L  N I  +G + + 
Sbjct: 238 TELSQIIAVNQNIAHIDLKKNLLGDEGVKILIKAISKSKNIVHLDLSSNQITHKGAKKIF 297

Query: 352 SGL----SSRKGKLAVLD-IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
           + L    S    KL  +D +  N +  KG  H+   +++ K L +++L  N + D G   
Sbjct: 298 TSLLPNCSLISLKLGSIDGVNKNKVGQKGVQHLIPLLQHSKFLQFLDLRSNILSDNGIVT 357

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           + DAL QN+T+ +++LG N I S G   +   L   +V+  LDL  NP+G  G   L + 
Sbjct: 358 LCDALFQNKTLVSLNLGSNEITSYGMERLKDALL-TTVLNELDLTGNPLGNQGIDYLGQY 416

Query: 467 LKFHGNINTLKL--GWCQIGASGAEFVADMLRYNNTISILDLRANGLR------------ 512
           +  H + N ++L    C+  + G+  +   +R  +++  L L  N L+            
Sbjct: 417 MS-HADCNLVRLNISECRFQSPGSILLFQAVRKCSSLKHLILDKNDLKSRNSSYLTTGIY 475

Query: 513 ---------------DEG---AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
                          DEG   A+ L++S       L ++ L +N + D+ A  +A+AL A
Sbjct: 476 HGLTYLSMIRCNLGDDEGISVAEGLSRS-----RQLKALILQYNSLSDEAAKTLAEAL-A 529

Query: 555 NEDVAVTSLNLANNFLTKFG 574
              V +  L+L++N +   G
Sbjct: 530 KPTVNIEHLDLSHNKINDAG 549



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 171/378 (45%), Gaps = 14/378 (3%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +G      L  I+  N  +  + L    L DEG K + + +  +  +  L+L++N I + 
Sbjct: 232 MGQNAATELSQIIAVNQNIAHIDLKKNLLGDEGVKILIKAISKSKNIVHLDLSSNQITHK 291

Query: 290 GFTSLAEALLENSTIRSLHL------NGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           G   +  +LL N ++ SL L      N N  G  G   L   L+ +K L+ L L  N + 
Sbjct: 292 GAKKIFTSLLPNCSLISLKLGSIDGVNKNKVGQKGVQHLIPLLQHSKFLQFLDLRSNILS 351

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D GI  L   L   K  L  L++G+N I++ G   + + +     L  ++L  N +G++G
Sbjct: 352 DNGIVTLCDALFQNKT-LVSLNLGSNEITSYGMERLKDALLTT-VLNELDLTGNPLGNQG 409

Query: 404 AEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            + +   +   +  +  +++      S G+  + + ++  S +  L L  N + +  +  
Sbjct: 410 IDYLGQYMSHADCNLVRLNISECRFQSPGSILLFQAVRKCSSLKHLILDKNDLKSRNSSY 469

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           L+  + +HG +  L +  C +G      VA+ L  +  +  L L+ N L DE AK LA++
Sbjct: 470 LTTGI-YHG-LTYLSMIRCNLGDDEGISVAEGLSRSRQLKALILQYNSLSDEAAKTLAEA 527

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN---EDVAVTSLNLANNFLTKFGQSALT 579
                  +  +DL+ N+I D G   I  +L  N     + + S+NL     + F +S   
Sbjct: 528 LAKPTVNIEHLDLSHNKINDAGGQLIGISLGQNSLLSKLNLKSINLKETTGSLFAKSVKQ 587

Query: 580 DAKDLVYEMSEKEVNIFF 597
           +++    ++S+  V + F
Sbjct: 588 NSQIQFLDLSKNSVPVNF 605



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 36/334 (10%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+      D G+  L ++L  N+T   ++  +N IT+ G++     L + + L  L+L+
Sbjct: 343 LDLRSNILSDNGIVTLCDALFQNKTLVSLNLGSNEITSYGMERLKDALLTTV-LNELDLT 401

Query: 227 GNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           GNP+G++G+  L   +   +  + RL +S    +  G+  + + ++  S L+ L L+ N 
Sbjct: 402 GNPLGNQGIDYLGQYMSHADCNLVRLNISECRFQSPGSILLFQAVRKCSSLKHLILDKND 461

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +     + L   +    T  S+ +  N G   G  ++A+GL  ++ L+ L L  NS+ DE
Sbjct: 462 LKSRNSSYLTTGIYHGLTYLSM-IRCNLGDDEGI-SVAEGLSRSRQLKALILQYNSLSDE 519

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
             + L   L+     +  LD+ +N I+                            D G +
Sbjct: 520 AAKTLAEALAKPTVNIEHLDLSHNKIN----------------------------DAGGQ 551

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            I  +L QN  ++ ++L   N+     S  A+ +K NS I  LDL+ N +  +  + + +
Sbjct: 552 LIGISLGQNSLLSKLNLKSINLKETTGSLFAKSVKQNSQIQFLDLSKNSVPVNFIEDIEQ 611

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
            L+    +N ++    +I     E V   L   N
Sbjct: 612 QLQ----VNLIRAAKNKIPQYKTEVVQLKLEQEN 641


>gi|399498076|emb|CCG20366.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLLQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  A  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  N  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLS 417


>gi|399497866|emb|CCG20261.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497888|emb|CCG20272.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497910|emb|CCG20283.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497918|emb|CCG20287.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497976|emb|CCG20316.1| Ran GTPase activating protein 2 [Solanum phureja]
 gi|399497978|emb|CCG20317.1| Ran GTPase activating protein 2 [Solanum phureja]
          Length = 553

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLLQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  A  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  N  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLS 417


>gi|399497982|emb|CCG20319.1| Ran GTPase activating protein 2 [Solanum phureja]
          Length = 553

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLLQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  A  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  N  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLS 417


>gi|399497856|emb|CCG20256.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497864|emb|CCG20260.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLLQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  A  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  N  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLS 417


>gi|320167855|gb|EFW44754.1| hypothetical protein CAOG_02779 [Capsaspora owczarzaki ATCC 30864]
          Length = 983

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 145/288 (50%), Gaps = 3/288 (1%)

Query: 240 DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
           ++L     ++ +    V+LRDE  + + + L     L  L L++N I   GF ++   L 
Sbjct: 228 ELLFRAGDIKSISFEGVNLRDEIMQPLVKSLLLKRSLESLNLSHNPIKLPGFDAVGFLLR 287

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE-GIRALMSGLSSRK 358
             + ++ L+L+     A  AN+L   L     L  L L    + +   + A+  G+  R 
Sbjct: 288 RGAQLKHLNLSAISIDAKCANSLGVSLLTCIGLESLVLQNCGLKNSVSLEAICEGVR-RN 346

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
             + +LD+ +N I  KGA  VA  ++   +LL + L  N I D GAE IAD+L  NRT+ 
Sbjct: 347 HTVRLLDLQSNGIGPKGAKVVAHMVQKNDTLLCLRLGGNPIQDHGAEFIADSLSVNRTLQ 406

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG-ADGAKALSEVLKFHGNINTLK 477
            ++L G +I   G +A+A+VL  NS + +++L YN +G ADG + L + L  +  +  L 
Sbjct: 407 KMELWGCSIQLPGLTALAQVLTKNSPLEAINLGYNALGNADGMETLCKALISNKYLRELI 466

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
           L    + +  A  +A  L  N  +++LD+R N L   G   L+ + ++
Sbjct: 467 LASTGMQSESAVALAGALAENKHLAVLDIRHNDLGQGGLIALSVAMRL 514



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 142/312 (45%), Gaps = 31/312 (9%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             S+   G N  DE +  L +SL   ++ E ++ + N I   G  A   +L+    LK L
Sbjct: 236 IKSISFEGVNLRDEIMQPLVKSLLLKRSLESLNLSHNPIKLPGFDAVGFLLRRGAQLKHL 295

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA-KAIAELLKNNSILRVLELN 282
           NLS   I  +    L   L+   G+E L L +  L++  + +AI E ++ N  +R+L+L 
Sbjct: 296 NLSAISIDAKCANSLGVSLLTCIGLESLVLQNCGLKNSVSLEAICEGVRRNHTVRLLDLQ 355

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G   +A  + +N T+  L L GN     GA  +A  L  N++L+++ L G SI
Sbjct: 356 SNGIGPKGAKVVAHMVQKNDTLLCLRLGGNPIQDHGAEFIADSLSVNRTLQKMELWGCSI 415

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD- 401
              G+ AL                             A+ +     L  INL  N +G+ 
Sbjct: 416 QLPGLTAL-----------------------------AQVLTKNSPLEAINLGYNALGNA 446

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +G E +  AL  N+ +  + L    + S+ A A+A  L +N  +  LD+ +N +G  G  
Sbjct: 447 DGMETLCKALISNKYLRELILASTGMQSESAVALAGALAENKHLAVLDIRHNDLGQGGLI 506

Query: 462 ALSEVLKFHGNI 473
           ALS  ++ + ++
Sbjct: 507 ALSVAMRLNRSV 518



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 4/200 (2%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           ++ N  ++ L+L  N IG +G K +  ++  N  +  L+L    ++D GA+ IA+ L  N
Sbjct: 343 VRRNHTVRLLDLQSNGIGPKGAKVVAHMVQKNDTLLCLRLGGNPIQDHGAEFIADSLSVN 402

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN-YGGALGANALAKGLEGNKSL 332
             L+ +EL    I   G T+LA+ L +NS + +++L  N  G A G   L K L  NK L
Sbjct: 403 RTLQKMELWGCSIQLPGLTALAQVLTKNSPLEAINLGYNALGNADGMETLCKALISNKYL 462

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG--AFHVAEYIKNCKSLL 390
           REL L    +  E   AL   L+  K  LAVLDI +N +   G  A  VA  +      L
Sbjct: 463 RELILASTGMQSESAVALAGALAENK-HLAVLDIRHNDLGQGGLIALSVAMRLNRSVIQL 521

Query: 391 WINLYMNDIGDEGAEKIADA 410
           + ++    +G+     I D 
Sbjct: 522 FFDMAKPIVGNPPHSAIPDP 541



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 29/186 (15%)

Query: 179 LFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCL 238
           L  + E +  N T   +   +NGI   G K    ++Q N  L  L L GNPI D G + +
Sbjct: 336 LEAICEGVRRNHTVRLLDLQSNGIGPKGAKVVAHMVQKNDTLLCLRLGGNPIQDHGAEFI 395

Query: 239 CDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN-------------- 284
            D L  N  +++++L    ++  G  A+A++L  NS L  + L  N              
Sbjct: 396 ADSLSVNRTLQKMELWGCSIQLPGLTALAQVLTKNSPLEAINLGYNALGNADGMETLCKA 455

Query: 285 ----------MIDYSGFTS-----LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
                     ++  +G  S     LA AL EN  +  L +  N  G  G  AL+  +  N
Sbjct: 456 LISNKYLRELILASTGMQSESAVALAGALAENKHLAVLDIRHNDLGQGGLIALSVAMRLN 515

Query: 330 KSLREL 335
           +S+ +L
Sbjct: 516 RSVIQL 521


>gi|399498078|emb|CCG20367.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 132/269 (49%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +LQS   L+ L L  + I  E    +  ++     ++ L   +    
Sbjct: 224 NALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSKLVPSTEKLKVLHFHNNMTG 283

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  G    
Sbjct: 284 DEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVG 343

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+ A  +
Sbjct: 344 LVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAI 403

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  +A+ +
Sbjct: 404 ASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTV 463

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLK 468
                   L++  N I  +G   L E+ K
Sbjct: 464 LHKDEFKLLNVNVNFISEEGVDELKEIFK 492



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNL  N +G++GV+    +L     +E L L +  +  E A A+++L+ +   L+VL
Sbjct: 216 LKFLNLPDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSKLVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNVNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLPDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           ++ + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SKLVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 145/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L  N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLPDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLLQSQTNLEELFLMNDGISQEAANAV-SKLVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  A  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  N  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 562 SLNLANNFLTKFGQSALTD 580
           ++N+  NF+++ G   L +
Sbjct: 473 NVNV--NFISEEGVDELKE 489



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 140/306 (45%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++     G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLPDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSKLVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++  N I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNVNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 128/290 (44%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLPDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+++++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSKLVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLS 417


>gi|290990770|ref|XP_002678009.1| predicted protein [Naegleria gruberi]
 gi|284091619|gb|EFC45265.1| predicted protein [Naegleria gruberi]
          Length = 329

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 123/221 (55%), Gaps = 31/221 (14%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K L  L++  N IG EG + +     S   +L  LDI  N I  +G+    +YI   K L
Sbjct: 128 KQLTSLYISDNQIGVEGAKYI-----SEMKQLTSLDITYNQIGVEGS----KYISEMKQL 178

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             +N+Y N IG EG + I++     + +T++++G N I  +GA  I+ + +    +TSLD
Sbjct: 179 TSLNIYYNGIGVEGTKYISEM----KQLTSLNIGYNQIGVEGAKYISEMKQ----LTSLD 230

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           + YN IG +G+K +SE+      + +L +G+ QIG  G++F+++M +       L++  N
Sbjct: 231 IYYNGIGVEGSKYISEM----KQLTSLNIGYNQIGVEGSKFISEMKQLT-----LNITGN 281

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
            +  EGAK +++      + LTS+D+ +N+I  +G+  I++
Sbjct: 282 QIGVEGAKFISEM-----KQLTSLDITYNQIGVEGSKFISE 317



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 35/223 (15%)

Query: 249 ERLQLSSVDLRD-----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           E  QL+S+ + D     EGAK I+E+ +    L  L++  N I   G   ++E       
Sbjct: 126 EMKQLTSLYISDNQIGVEGAKYISEMKQ----LTSLDITYNQIGVEGSKYISEM----KQ 177

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           + SL++  N  G  G   +++     K L  L++  N IG EG + +     S   +L  
Sbjct: 178 LTSLNIYYNGIGVEGTKYISEM----KQLTSLNIGYNQIGVEGAKYI-----SEMKQLTS 228

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LDI  N I  +G+    +YI   K L  +N+  N IG EG++ I++ +KQ     T+++ 
Sbjct: 229 LDIYYNGIGVEGS----KYISEMKQLTSLNIGYNQIGVEGSKFISE-MKQ----LTLNIT 279

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           GN I  +GA  I+ + +    +TSLD+ YN IG +G+K +SE+
Sbjct: 280 GNQIGVEGAKFISEMKQ----LTSLDITYNQIGVEGSKFISEM 318



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 99/190 (52%), Gaps = 40/190 (21%)

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV-------L 467
           + +T++ +  N I  +GA  I+ + +    +TSLD+ YN IG +G+K +SE+       +
Sbjct: 128 KQLTSLYISDNQIGVEGAKYISEMKQ----LTSLDITYNQIGVEGSKYISEMKQLTSLNI 183

Query: 468 KFHG-------------NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            ++G              + +L +G+ QIG  GA+++++M      ++ LD+  NG+  E
Sbjct: 184 YYNGIGVEGTKYISEMKQLTSLNIGYNQIGVEGAKYISEM----KQLTSLDIYYNGIGVE 239

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           G+K +++      + LTS+++ +N+I  +G+  I+       ++   +LN+  N +   G
Sbjct: 240 GSKYISEM-----KQLTSLNIGYNQIGVEGSKFIS-------EMKQLTLNITGNQIGVEG 287

Query: 575 QSALTDAKDL 584
              +++ K L
Sbjct: 288 AKFISEMKQL 297



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 44/219 (20%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           ++  E++  +S+D++    G EG  +++E     +    ++   NGI   G K    + Q
Sbjct: 146 KYISEMKQLTSLDITYNQIGVEGSKYISEM----KQLTSLNIYYNGIGVEGTKYISEMKQ 201

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD-----EGAKAIAELL 270
               L +LN+  N IG EG K +          E  QL+S+D+       EG+K I+E+ 
Sbjct: 202 ----LTSLNIGYNQIGVEGAKYIS---------EMKQLTSLDIYYNGIGVEGSKYISEMK 248

Query: 271 KNNSILRVLELNNNMIDYSG--FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +    L  L +  N I   G  F S  + L       +L++ GN  G  GA  +++    
Sbjct: 249 Q----LTSLNIGYNQIGVEGSKFISEMKQL-------TLNITGNQIGVEGAKFISEM--- 294

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            K L  L +  N IG EG     S   S   +L  LDIG
Sbjct: 295 -KQLTSLDITYNQIGVEG-----SKFISEMKQLTSLDIG 327


>gi|406939756|gb|EKD72712.1| hypothetical protein ACD_45C00605G0001 [uncultured bacterium]
          Length = 541

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 208/420 (49%), Gaps = 58/420 (13%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL 242
           A SL   +  + +S   N I   GI  +      N +LK++ L+ N I D+G K    +L
Sbjct: 153 AISLANMRNIQRISLMNNDIDDDGIIPY----SKNTSLKSIALNKNHITDKGAK----VL 204

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            ++  ++ + LSS ++ DEGA ++A     N  +  L+++NN I   G     +AL +N 
Sbjct: 205 TNSISLKEIWLSSNEIGDEGAISLAY----NKYITSLDVSNNHISTIGI----KALQQNK 256

Query: 303 TIRSLHLNGNYGG--ALGANALAKGLE---GNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            I  L   GN     +L  N + K +     + S+  L+L+   + D  I  + S L+  
Sbjct: 257 NITELETTGNLDKPPSLCFNDIDKRVNVSVEDPSIVRLNLYSCELRDADISFVTSYLNLH 316

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
              +  L I NN I + GA  + +     K+L  +N+  N +    AE    A  +N T+
Sbjct: 317 P-YINFLQISNNKIGSNGAILLGQ----NKTLKTLNISNNLLDSRSAE----AFSKNTTL 367

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV--LKF----HG 471
             +DL GN++   GA    ++L +N+V+  L+++ N +G DG  AL+++  LK       
Sbjct: 368 IRLDLEGNHLGENGA----KILANNNVLDVLNISKNYVGDDGFAALTKMKSLKILIADDN 423

Query: 472 NINTLKLG----WCQIGASG---AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
            I+ L +     + ++  SG   +   ADM+ +N +++ L L  N L D+GA  LA+   
Sbjct: 424 QISDLGVSSPFLFHELYLSGNNISSIGADMISHNPSLTDLGLSDNYLGDDGATILAR--- 480

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
             N+++ S++L +NEI   GA AIAQ      ++ +  LN+A+N +   G +AL + K L
Sbjct: 481 --NKSIISLNLNYNEIGSTGAIAIAQ------NIILRDLNIAHNHICSIGLAALYNNKTL 532



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 152/348 (43%), Gaps = 72/348 (20%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    GDEG    A SL YN+    +  + N I+  GIKA    LQ N  +  L  +GN
Sbjct: 215 LSSNEIGDEG----AISLAYNKYITSLDVSNNHISTIGIKA----LQQNKNITELETTGN 266

Query: 229 PIGDEGVKCLCDI------LVDNAGVERLQLSSVDLRDEGAKAI---------------- 266
            +      C  DI       V++  + RL L S +LRD     +                
Sbjct: 267 -LDKPPSLCFNDIDKRVNVSVEDPSIVRLNLYSCELRDADISFVTSYLNLHPYINFLQIS 325

Query: 267 --------AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
                   A LL  N  L+ L ++NN++D    +  AEA  +N+T+  L L GN+ G  G
Sbjct: 326 NNKIGSNGAILLGQNKTLKTLNISNNLLD----SRSAEAFSKNTTLIRLDLEGNHLGENG 381

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A  LA     N  L  L++  N +GD+G  AL     ++   L +L   +N IS  G   
Sbjct: 382 AKILAN----NNVLDVLNISKNYVGDDGFAAL-----TKMKSLKILIADDNQISDLGV-- 430

Query: 379 VAEYIKNCKSLLWINLYM--NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
                      L+  LY+  N+I   G    AD +  N ++T + L  N +   GA+ +A
Sbjct: 431 -------SSPFLFHELYLSGNNISSIG----ADMISHNPSLTDLGLSDNYLGDDGATILA 479

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           R    N  I SL+L YN IG+ GA A+++ +    ++N      C IG
Sbjct: 480 R----NKSIISLNLNYNEIGSTGAIAIAQNIILR-DLNIAHNHICSIG 522



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 187/418 (44%), Gaps = 83/418 (19%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD 260
           G+T   +     +LQ    + TLNL  N IG +G      +L  N  + RL LS+  + D
Sbjct: 47  GLTDKDVPRVISLLQQYPKVDTLNLEMNHIGPKGAA----LLSKNKTLSRLDLSNNQIGD 102

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
            GA A ++    N+ L  L +  N I   G    A+ L +N  +R L +  N+ G+ GA 
Sbjct: 103 AGASAFSK----NTTLTELYIIANAIGPEG----AKGLSQNKNLRILLIGDNHIGSSGAI 154

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA      ++++ + L  N I D+GI        S+   L  + +  N I+ KG    A
Sbjct: 155 SLANM----RNIQRISLMNNDIDDDGIIPY-----SKNTSLKSIALNKNHITDKG----A 201

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + N  SL  I L  N+IGDEGA  +A     N+ IT++D+  N+I + G  A    L+
Sbjct: 202 KVLTNSISLKEIWLSSNEIGDEGAISLA----YNKYITSLDVSNNHISTIGIKA----LQ 253

Query: 441 DNSVITSLD----------LAYNPI------------------------GADGAKALSEV 466
            N  IT L+          L +N I                         AD    ++  
Sbjct: 254 QNKNITELETTGNLDKPPSLCFNDIDKRVNVSVEDPSIVRLNLYSCELRDAD-ISFVTSY 312

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
           L  H  IN L++   +IG++GA     +L  N T+  L++  N L    A+  ++     
Sbjct: 313 LNLHPYINFLQISNNKIGSNGAI----LLGQNKTLKTLNISNNLLDSRSAEAFSK----- 363

Query: 527 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           N  L  +DL  N + ++GA      + AN +V +  LN++ N++   G +ALT  K L
Sbjct: 364 NTTLIRLDLEGNHLGENGA-----KILANNNV-LDVLNISKNYVGDDGFAALTKMKSL 415



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 109/214 (50%), Gaps = 43/214 (20%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +NL MN IG +GA      L +N+T++ +DL  N I   GASA ++    N+ +T L + 
Sbjct: 69  LNLEMNHIGPKGAA----LLSKNKTLSRLDLSNNQIGDAGASAFSK----NTTLTELYII 120

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM----------------- 494
            N IG +GAK LS+    + N+  L +G   IG+SGA  +A+M                 
Sbjct: 121 ANAIGPEGAKGLSQ----NKNLRILLIGDNHIGSSGAISLANMRNIQRISLMNNDIDDDG 176

Query: 495 -LRY--NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
            + Y  N ++  + L  N + D+GAK L  S      +L  I L+ NEI D+GA ++A  
Sbjct: 177 IIPYSKNTSLKSIALNKNHITDKGAKVLTNSI-----SLKEIWLSSNEIGDEGAISLAY- 230

Query: 552 LKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
                +  +TSL+++NN ++  G  AL   K++ 
Sbjct: 231 -----NKYITSLDVSNNHISTIGIKALQQNKNIT 259


>gi|399497916|emb|CCG20286.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLREALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +DL  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLREALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + L    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEVLASL 501



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLREAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  ++L++N L + G   L
Sbjct: 441 -LIEVDLSSNALRRAGARVL 459



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+   +L EL L  + I  E   A +S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLLQSQTNLEELFLMNDGISQEAANA-VSELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLREALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  A  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +DL+ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 147/315 (46%), Gaps = 6/315 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLREALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ ++L  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLKDN-SVITSL 448
           +  + K +  V+ SL
Sbjct: 487 LKEIFKKSPEVLASL 501



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLREALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLS 417


>gi|291407748|ref|XP_002720226.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12
           (predicted)-like [Oryctolagus cuniculus]
          Length = 1010

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 143/321 (44%), Gaps = 7/321 (2%)

Query: 238 LCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
           LC  L +    ++ L+L    L     + ++ + + N  L  LE   N ++ SG   L E
Sbjct: 650 LCQALQNPYCKIKDLKLIFCHLTASCGRDLSSVFETNQYLTDLEFVKNTLEDSGLKLLCE 709

Query: 297 ALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
            L   N  ++ L L           ALA  L  N+ L EL L  N +GD G++ L  GL 
Sbjct: 710 GLKRPNCILQKLRLYRCLISPASCGALAAVLSTNQHLTELDLSENPLGDTGVKYLCEGLR 769

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
               K+  L++   S+SA     +A+ + + +SL  + L  N I D G + + + LKQ  
Sbjct: 770 HANCKVEKLELSECSLSAACCEPLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQP- 828

Query: 416 TITTIDLGGNNIHSKGASA--IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGN 472
                DL     H  GA    +   L  N  +  LDL+ N +G +G + L E LK  +  
Sbjct: 829 DCQLKDLALWTCHLTGACCQDLCNALYTNEHLRDLDLSDNALGDEGMQVLCEGLKHPYCK 888

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           + TL L  C +  +    +A +L  N  +++LDL  N LRD G + L  +       L +
Sbjct: 889 LQTLWLAECHLTDACCGALASVLSRNENLTLLDLSGNHLRDFGVQMLCDALIHPVCKLQT 948

Query: 533 IDLAFNEIRDDGAFAIAQALK 553
             +  + + DD  F   +ALK
Sbjct: 949 FYIDTDHLHDD-TFRKMEALK 968



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 115/244 (47%), Gaps = 13/244 (5%)

Query: 176 DEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           D GL  L E L   N   +++      I+ A   A   VL +N  L  L+LS NP+GD G
Sbjct: 701 DSGLKLLCEGLKRPNCILQKLRLYRCLISPASCGALAAVLSTNQHLTELDLSENPLGDTG 760

Query: 235 VKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           VK LC+ L   N  VE+L+LS   L     + +A++L +   L  L L NN I+  G   
Sbjct: 761 VKYLCEGLRHANCKVEKLELSECSLSAACCEPLAQVLSSTRSLTRLLLINNKIEDLGLKL 820

Query: 294 LAEAL------LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
           L E L      L++  + + HL G          L   L  N+ LR+L L  N++GDEG+
Sbjct: 821 LCEGLKQPDCQLKDLALWTCHLTGA-----CCQDLCNALYTNEHLRDLDLSDNALGDEGM 875

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
           + L  GL     KL  L +    ++      +A  +   ++L  ++L  N + D G + +
Sbjct: 876 QVLCEGLKHPYCKLQTLWLAECHLTDACCGALASVLSRNENLTLLDLSGNHLRDFGVQML 935

Query: 408 ADAL 411
            DAL
Sbjct: 936 CDAL 939



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 123/280 (43%), Gaps = 4/280 (1%)

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           I+ L L   +  A     L+   E N+ L +L    N++ D G++ L  GL      L  
Sbjct: 661 IKDLKLIFCHLTASCGRDLSSVFETNQYLTDLEFVKNTLEDSGLKLLCEGLKRPNCILQK 720

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDL 422
           L +    IS      +A  +   + L  ++L  N +GD G + + + L+  N  +  ++L
Sbjct: 721 LRLYRCLISPASCGALAAVLSTNQHLTELDLSENPLGDTGVKYLCEGLRHANCKVEKLEL 780

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWC 481
              ++ +     +A+VL     +T L L  N I   G K L E LK     +  L L  C
Sbjct: 781 SECSLSAACCEPLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQPDCQLKDLALWTC 840

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
            +  +  + + + L  N  +  LDL  N L DEG + L +  K     L ++ LA   + 
Sbjct: 841 HLTGACCQDLCNALYTNEHLRDLDLSDNALGDEGMQVLCEGLKHPYCKLQTLWLAECHLT 900

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           D    A+A  L  NE+  +T L+L+ N L  FG   L DA
Sbjct: 901 DACCGALASVLSRNEN--LTLLDLSGNHLRDFGVQMLCDA 938



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 3/269 (1%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRD 260
           +TA+  +    V ++N  L  L    N + D G+K LC+ L   N  +++L+L    +  
Sbjct: 671 LTASCGRDLSSVFETNQYLTDLEFVKNTLEDSGLKLLCEGLKRPNCILQKLRLYRCLISP 730

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGA 319
               A+A +L  N  L  L+L+ N +  +G   L E L   N  +  L L+     A   
Sbjct: 731 ASCGALAAVLSTNQHLTELDLSENPLGDTGVKYLCEGLRHANCKVEKLELSECSLSAACC 790

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             LA+ L   +SL  L L  N I D G++ L  GL     +L  L +    ++      +
Sbjct: 791 EPLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQPDCQLKDLALWTCHLTGACCQDL 850

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARV 438
              +   + L  ++L  N +GDEG + + + LK     + T+ L   ++      A+A V
Sbjct: 851 CNALYTNEHLRDLDLSDNALGDEGMQVLCEGLKHPYCKLQTLWLAECHLTDACCGALASV 910

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVL 467
           L  N  +T LDL+ N +   G + L + L
Sbjct: 911 LSRNENLTLLDLSGNHLRDFGVQMLCDAL 939



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 3/213 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           +  + +D+S    GD G+ +L E L + N   E++  +   ++AA  +    VL S  +L
Sbjct: 744 QHLTELDLSENPLGDTGVKYLCEGLRHANCKVEKLELSECSLSAACCEPLAQVLSSTRSL 803

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L L  N I D G+K LC+ L   +  ++ L L +  L     + +   L  N  LR L
Sbjct: 804 TRLLLINNKIEDLGLKLLCEGLKQPDCQLKDLALWTCHLTGACCQDLCNALYTNEHLRDL 863

Query: 280 ELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           +L++N +   G   L E L      +++L L   +       ALA  L  N++L  L L 
Sbjct: 864 DLSDNALGDEGMQVLCEGLKHPYCKLQTLWLAECHLTDACCGALASVLSRNENLTLLDLS 923

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           GN + D G++ L   L     KL    I  + +
Sbjct: 924 GNHLRDFGVQMLCDALIHPVCKLQTFYIDTDHL 956


>gi|281354526|gb|EFB30110.1| hypothetical protein PANDA_017872 [Ailuropoda melanoleuca]
          Length = 1031

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 155/343 (45%), Gaps = 18/343 (5%)

Query: 190  QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL------V 243
            QT    S   + +  A  K     L +N  L  L L  N +G  GV+ LC  L      +
Sbjct: 683  QTLPAPSPEKHLLPEAYSKQLAAALSTNPNLTELVLYRNALGSRGVRLLCQGLRHPGCKL 742

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
             N  ++R  + S   +D  A  +A    N S+ RV +L+ N +   G   L E L     
Sbjct: 743  QNLSLKRCCVPSSACQDLAAALVA----NRSLTRV-DLSCNGLGLPGVRLLCEGLQHPGC 797

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             ++++ L      A     +A  L  N+ L EL L GN + D G+R L  GL     +L 
Sbjct: 798  RLQAIQLRKCQLEAGACREIASVLSTNRHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQ 857

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTID 421
            +L +    ++A     +A  +   +SL+ ++L +ND+GD GA  + + L+  + ++ T+ 
Sbjct: 858  ILWLKICHLTAAACEELASTLAVNRSLMELDLSLNDLGDPGALLLCEGLRHPQCSLQTVR 917

Query: 422  LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW- 480
            LG   + S     I  VL+ N  +  LDL++N +G  G   L E L+ H      KL W 
Sbjct: 918  LGICRLSSATCEGICTVLRVNPHLRELDLSFNDLGDTGMWPLCEGLR-HPTCRLQKL-WL 975

Query: 481  --CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
              C + A   E ++  L  + T++ L L  N L + G + L +
Sbjct: 976  DSCGLTAKACEDLSSALGVSQTLTELYLTNNALGNAGVRLLCK 1018



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 30/265 (11%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           +  LA  L  N +L EL L+ N++G  G+R L  GL     KL  L +    + +     
Sbjct: 700 SKQLAAALSTNPNLTELVLYRNALGSRGVRLLCQGLRHPGCKLQNLSLKRCCVPSSACQD 759

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIAR 437
           +A  +   +SL  ++L  N +G  G   + + L+     +  I L    + +     IA 
Sbjct: 760 LAAALVANRSLTRVDLSCNGLGLPGVRLLCEGLQHPGCRLQAIQLRKCQLEAGACREIAS 819

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLR 496
           VL  N  +  LDL  N +   G + L + L+  G  +  L L  C + A+  E +A  L 
Sbjct: 820 VLSTNRHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQILWLKICHLTAAACEELASTLA 879

Query: 497 YNNTISILDLRANGLRDEGA----------KCLAQSFKV------------------VNE 528
            N ++  LDL  N L D GA          +C  Q+ ++                  VN 
Sbjct: 880 VNRSLMELDLSLNDLGDPGALLLCEGLRHPQCSLQTVRLGICRLSSATCEGICTVLRVNP 939

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALK 553
            L  +DL+FN++ D G + + + L+
Sbjct: 940 HLRELDLSFNDLGDTGMWPLCEGLR 964



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 5/315 (1%)

Query: 263  AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA 321
            +K +A  L  N  L  L L  N +   G   L + L      +++L L      +     
Sbjct: 700  SKQLAAALSTNPNLTELVLYRNALGSRGVRLLCQGLRHPGCKLQNLSLKRCCVPSSACQD 759

Query: 322  LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            LA  L  N+SL  + L  N +G  G+R L  GL     +L  + +    + A     +A 
Sbjct: 760  LAAALVANRSLTRVDLSCNGLGLPGVRLLCEGLQHPGCRLQAIQLRKCQLEAGACREIAS 819

Query: 382  YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLK 440
             +   + L+ ++L  N + D G   +   L+     +  + L   ++ +     +A  L 
Sbjct: 820  VLSTNRHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQILWLKICHLTAAACEELASTLA 879

Query: 441  DNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNN 499
             N  +  LDL+ N +G  GA  L E L+    ++ T++LG C++ ++  E +  +LR N 
Sbjct: 880  VNRSLMELDLSLNDLGDPGALLLCEGLRHPQCSLQTVRLGICRLSSATCEGICTVLRVNP 939

Query: 500  TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
             +  LDL  N L D G   L +  +     L  + L    +       ++ AL  ++   
Sbjct: 940  HLRELDLSFNDLGDTGMWPLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSALGVSQ--T 997

Query: 560  VTSLNLANNFLTKFG 574
            +T L L NN L   G
Sbjct: 998  LTELYLTNNALGNAG 1012



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 3/206 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIAL 220
            R    +D++G    D GL  L + L +     ++ +     +TAA  +     L  N +L
Sbjct: 825  RHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQILWLKICHLTAAACEELASTLAVNRSL 884

Query: 221  KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
              L+LS N +GD G   LC+ L      ++ ++L    L     + I  +L+ N  LR L
Sbjct: 885  MELDLSLNDLGDPGALLLCEGLRHPQCSLQTVRLGICRLSSATCEGICTVLRVNPHLREL 944

Query: 280  ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +L+ N +  +G   L E L   +  ++ L L+     A     L+  L  +++L EL+L 
Sbjct: 945  DLSFNDLGDTGMWPLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSALGVSQTLTELYLT 1004

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVL 364
             N++G+ G+R L  GLS    KL VL
Sbjct: 1005 NNALGNAGVRLLCKGLSHPGCKLQVL 1030



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 7/257 (2%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R+ + VD+S    G  G+  L E L +     + +      + A   +    VL +N  L
Sbjct: 768  RSLTRVDLSCNGLGLPGVRLLCEGLQHPGCRLQAIQLRKCQLEAGACREIASVLSTNRHL 827

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL---LKNNSILR 277
              L+L+GN + D G++ LC  L  + G  RLQ+  + +    A A  EL   L  N  L 
Sbjct: 828  VELDLTGNVLEDLGLRLLCQGL-RHPGC-RLQILWLKICHLTAAACEELASTLAVNRSLM 885

Query: 278  VLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L+L+ N +   G   L E L     +++++ L      +     +   L  N  LREL 
Sbjct: 886  ELDLSLNDLGDPGALLLCEGLRHPQCSLQTVRLGICRLSSATCEGICTVLRVNPHLRELD 945

Query: 337  LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
            L  N +GD G+  L  GL     +L  L + +  ++AK    ++  +   ++L  + L  
Sbjct: 946  LSFNDLGDTGMWPLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSALGVSQTLTELYLTN 1005

Query: 397  NDIGDEGAEKIADALKQ 413
            N +G+ G   +   L  
Sbjct: 1006 NALGNAGVRLLCKGLSH 1022


>gi|399497950|emb|CCG20303.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEG   IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +G  AIA ALK +   ++  L +A N +T
Sbjct: 369 EGVIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|399498058|emb|CCG20357.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLLQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  A  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  N  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLS 417


>gi|291239051|ref|XP_002739438.1| PREDICTED: leucine rich repeat containing 45-like [Saccoglossus
           kowalevskii]
          Length = 546

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 130/253 (51%), Gaps = 2/253 (0%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A+A  L  N ++ +L+L  N +  EG +A+   L      +A LD+ +N +S  
Sbjct: 158 GPAGARAIAITLVANTTILKLNLADNWLDSEGGQAVADMLK-ENCYIAELDLSDNRLSDD 216

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ +K   +L  + L  N  GD+ AE  A+ + QN  +  ++L  N+        
Sbjct: 217 GAKAMADMLKENVNLHSVTLAGNGFGDKSAEGFAEVILQNSKLENMNLSRNSFSEAAGLL 276

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +   + +N  I  LDL++N I   GA AL++ +  +  +  + L W  +G  GA  + + 
Sbjct: 277 LGPAISENITIRQLDLSWNHIRRKGAVALAKGIGSNIGLRKVDLSWNGLGNEGALAIGEA 336

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L+ NN++  LDL  N +  EGA  LA+    VNE L  + +  N ++  G + I +A+K 
Sbjct: 337 LKMNNSLEELDLTNNRISPEGAVLLAKGL-AVNETLRVLKVGKNPMQTAGCYGIVKAVKE 395

Query: 555 NEDVAVTSLNLAN 567
           N + A+  L+ ++
Sbjct: 396 NANTAIEQLDFSD 408



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 31/296 (10%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S + M     G  G   +A +L  N T  +++ A N + + G +A   +L+ N  +  L+
Sbjct: 148 SELTMKHHGLGPAGARAIAITLVANTTILKLNLADNWLDSEGGQAVADMLKENCYIAELD 207

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N + D+G K + D+L +N  +  + L+     D+ A+  AE++  NS L  + L+ N
Sbjct: 208 LSDNRLSDDGAKAMADMLKENVNLHSVTLAGNGFGDKSAEGFAEVILQNSKLENMNLSRN 267

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
               +    L  A+ EN TIR L L+ N+    GA ALAKG+  N  LR++ L  N +G+
Sbjct: 268 SFSEAAGLLLGPAISENITIRQLDLSWNHIRRKGAVALAKGIGSNIGLRKVDLSWNGLGN 327

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           E                             GA  + E +K   SL  ++L  N I  EGA
Sbjct: 328 E-----------------------------GALAIGEALKMNNSLEELDLTNNRISPEGA 358

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD--NSVITSLDLAYNPIGAD 458
             +A  L  N T+  + +G N + + G   I + +K+  N+ I  LD +   +  D
Sbjct: 359 VLLAKGLAVNETLRVLKVGKNPMQTAGCYGIVKAVKENANTAIEQLDFSDIQVNKD 414



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E++   +G+  AG +A    L +N  +  LNL+ N +  EG + + D+L +N  +  L L
Sbjct: 149 ELTMKHHGLGPAGARAIAITLVANTTILKLNLADNWLDSEGGQAVADMLKENCYIAELDL 208

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           S   L D+GAKA+A++LK N  L  + L  N          AE +L+NS + +++L+ N 
Sbjct: 209 SDNRLSDDGAKAMADMLKENVNLHSVTLAGNGFGDKSAEGFAEVILQNSKLENMNLSRNS 268

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
                   L   +  N ++R+L                             D+  N I  
Sbjct: 269 FSEAAGLLLGPAISENITIRQL-----------------------------DLSWNHIRR 299

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           KGA  +A+ I +   L  ++L  N +G+EGA  I +ALK N ++  +DL  N I  +GA 
Sbjct: 300 KGAVALAKGIGSNIGLRKVDLSWNGLGNEGALAIGEALKMNNSLEELDLTNNRISPEGAV 359

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            +A+ L  N  +  L +  NP+   G   + + +K + N    +L +  I
Sbjct: 360 LLAKGLAVNETLRVLKVGKNPMQTAGCYGIVKAVKENANTAIEQLDFSDI 409



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 100/209 (47%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  E  Q + +  KE    + +D+S     D+G   +A+ L  N     V+ A NG    
Sbjct: 185 LDSEGGQAVADMLKENCYIAELDLSDNRLSDDGAKAMADMLKENVNLHSVTLAGNGFGDK 244

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
             + F  V+  N  L+ +NLS N   +     L   + +N  + +L LS   +R +GA A
Sbjct: 245 SAEGFAEVILQNSKLENMNLSRNSFSEAAGLLLGPAISENITIRQLDLSWNHIRRKGAVA 304

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +A+ + +N  LR ++L+ N +   G  ++ EAL  N+++  L L  N     GA  LAKG
Sbjct: 305 LAKGIGSNIGLRKVDLSWNGLGNEGALAIGEALKMNNSLEELDLTNNRISPEGAVLLAKG 364

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           L  N++LR L +  N +   G   ++  +
Sbjct: 365 LAVNETLRVLKVGKNPMQTAGCYGIVKAV 393



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 87/185 (47%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           +L  +  + + +  KE     SV ++G  FGD+     AE +  N   E ++ + N  + 
Sbjct: 212 RLSDDGAKAMADMLKENVNLHSVTLAGNGFGDKSAEGFAEVILQNSKLENMNLSRNSFSE 271

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           A        +  NI ++ L+LS N I  +G   L   +  N G+ ++ LS   L +EGA 
Sbjct: 272 AAGLLLGPAISENITIRQLDLSWNHIRRKGAVALAKGIGSNIGLRKVDLSWNGLGNEGAL 331

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AI E LK N+ L  L+L NN I   G   LA+ L  N T+R L +  N     G   + K
Sbjct: 332 AIGEALKMNNSLEELDLTNNRISPEGAVLLAKGLAVNETLRVLKVGKNPMQTAGCYGIVK 391

Query: 325 GLEGN 329
            ++ N
Sbjct: 392 AVKEN 396



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 72/139 (51%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             ++++S  +F +     L  ++  N T  ++  + N I   G  A    + SNI L+ +
Sbjct: 259 LENMNLSRNSFSEAAGLLLGPAISENITIRQLDLSWNHIRRKGAVALAKGIGSNIGLRKV 318

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N +G+EG   + + L  N  +E L L++  +  EGA  +A+ L  N  LRVL++  
Sbjct: 319 DLSWNGLGNEGALAIGEALKMNNSLEELDLTNNRISPEGAVLLAKGLAVNETLRVLKVGK 378

Query: 284 NMIDYSGFTSLAEALLENS 302
           N +  +G   + +A+ EN+
Sbjct: 379 NPMQTAGCYGIVKAVKENA 397


>gi|397477086|ref|XP_003809913.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 5 isoform 2
            [Pan paniscus]
          Length = 1147

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 181/416 (43%), Gaps = 33/416 (7%)

Query: 169  MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSG 227
            M G+   +E        LG +    ++   ++ +T   +K     L+ S   ++TL    
Sbjct: 707  MRGKTLIEEQWEDFCSVLGTHPHLRQLDLGSSILTERAMKTLCAKLRHSTCKIQTLMFRN 766

Query: 228  NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
              I   GV+ L  IL+ N  +  L L    L++E  +   E LK+   L    L +  +D
Sbjct: 767  AQITP-GVQHLWRILMANRNLRSLNLGGTHLKEEDVRMACEALKHPKCL----LESLRLD 821

Query: 288  YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
              G T             + +L            +++ L  + SL+ L L GN + D+G+
Sbjct: 822  CCGLT------------HACYLK-----------ISQILTTSPSLKSLSLAGNKVTDQGV 858

Query: 348  RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
              L   L   +  L  L + +  I+A G   +A  + + +SL  + L  N +G+EG   +
Sbjct: 859  TPLSDALRVSQCALQKLILEDCGITATGCQSLASALVSNRSLTHLCLSNNSLGNEGVNLL 918

Query: 408  ADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
              +++  + ++  + L   ++ + G   +A  L  NS +T L L+ NP+  +G K L EV
Sbjct: 919  CRSMRLPHCSLQRLMLNQCHLDTAGCGFLALALMGNSWLTHLSLSMNPVEDNGVKLLCEV 978

Query: 467  LKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            ++    ++  L+L  C + A+  E ++ ++  +  +  LDL  N L D G   L +  K 
Sbjct: 979  MREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSLDLTDNALGDGGVAALCEGLKQ 1038

Query: 526  VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             N  LT + L    +  D   A++ AL  N    +TSLNL  N  +  G   L  A
Sbjct: 1039 KNSVLTRLGLKACGLTSDCCEALSLALSCNRH--LTSLNLVQNNFSPKGMMKLCSA 1092



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 162/373 (43%), Gaps = 4/373 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+      +  +  L   L ++    +     N     G++    +L +N  L++LNL 
Sbjct: 733  LDLGSSILTERAMKTLCAKLRHSTCKIQTLMFRNAQITPGVQHLWRILMANRNLRSLNLG 792

Query: 227  GNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            G  + +E V+  C+ L      +E L+L    L       I+++L  +  L+ L L  N 
Sbjct: 793  GTHLKEEDVRMACEALKHPKCLLESLRLDCCGLTHACYLKISQILTTSPSLKSLSLAGNK 852

Query: 286  IDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +   G T L++AL +    ++ L L      A G  +LA  L  N+SL  L L  NS+G+
Sbjct: 853  VTDQGVTPLSDALRVSQCALQKLILEDCGITATGCQSLASALVSNRSLTHLCLSNNSLGN 912

Query: 345  EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            EG+  L   +      L  L +    +   G   +A  +     L  ++L MN + D G 
Sbjct: 913  EGVNLLCRSMRLPHCSLQRLMLNQCHLDTAGCGFLALALMGNSWLTHLSLSMNPVEDNGV 972

Query: 405  EKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            + + + +++    +  ++L   ++ +    +++ V+  +  + SLDL  N +G  G  AL
Sbjct: 973  KLLCEVMREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSLDLTDNALGDGGVAAL 1032

Query: 464  SEVLKFHGNINT-LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
             E LK   ++ T L L  C + +   E ++  L  N  ++ L+L  N    +G   L  +
Sbjct: 1033 CEGLKQKNSVLTRLGLKACGLTSDCCEALSLALSCNRHLTSLNLVQNNFSPKGMMKLCSA 1092

Query: 523  FKVVNEALTSIDL 535
            F      L  I L
Sbjct: 1093 FACPTSNLQIIGL 1105


>gi|402894336|ref|XP_003910321.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14 [Papio
           anubis]
          Length = 1092

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 154/319 (48%), Gaps = 6/319 (1%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L + L   N  ++ L L        G   ++ 
Sbjct: 664 LCSVLHTNEHLRELDLCHSNLDKSAMNILHQELRHPNCKLQKLLLKC-ITFPDGCQDIST 722

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N++L  L L G+ IGD G+++L   L   + KL  L + + +++      ++  + 
Sbjct: 723 SLIHNQNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLSISNVLI 782

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 783 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEDLSLALISNK 842

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 843 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLQSLVLRHCHFTSLSSEYLSTSLLHNKSLT 902

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            LDL +N L+D G K L   F+  +  L  ++L    + +     +A  +  N ++   S
Sbjct: 903 HLDLGSNWLQDNGMKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVIVYNPNLR--S 960

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+L NN L   G   L DA
Sbjct: 961 LDLGNNNLQDDGVKILCDA 979



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 145/306 (47%), Gaps = 4/306 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD G+  L E+L + +   + +   +  +T     +   VL  + +L  LNL
Sbjct: 733  LDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLSISNVLIRSQSLIFLNL 792

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GV+ LC+ L      +ERL L S  L + G + ++  L +N  L  L L +N
Sbjct: 793  STNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEDLSLALISNKRLTHLCLADN 852

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   +++AL     T++SL L   +  +L +  L+  L  NKSL  L L  N + 
Sbjct: 853  VLGDGGVKLMSDALQHAQCTLQSLVLRHCHFTSLSSEYLSTSLLHNKSLTHLDLGSNWLQ 912

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D G++ L          L  L++    ++      +A  I    +L  ++L  N++ D+G
Sbjct: 913  DNGMKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVIVYNPNLRSLDLGNNNLQDDG 972

Query: 404  AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + DAL+  N  I  + L    + S     ++  L  N  +  ++L  N +G +G   
Sbjct: 973  VKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNQRLIKMNLTQNTLGYEGIMK 1032

Query: 463  LSEVLK 468
            L +VLK
Sbjct: 1033 LYKVLK 1038



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 169/363 (46%), Gaps = 7/363 (1%)

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELL 270
             VL +N  L+ L+L  + +    +  L   L   N  +++L L  +   D G + I+  L
Sbjct: 666  SVLHTNEHLRELDLCHSNLDKSAMNILHQELRHPNCKLQKLLLKCITFPD-GCQDISTSL 724

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN 329
             +N  L  L+L  + I  +G  SL EAL      +++L L           +++  L  +
Sbjct: 725  IHNQNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLSISNVLIRS 784

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL  L+L  N++ D+G++ L   L   K  L  L + +  ++  G   ++  + + K L
Sbjct: 785  QSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEDLSLALISNKRL 844

Query: 390  LWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              + L  N +GD G + ++DAL+  + T+ ++ L   +  S  +  ++  L  N  +T L
Sbjct: 845  THLCLADNVLGDGGVKLMSDALQHAQCTLQSLVLRHCHFTSLSSEYLSTSLLHNKSLTHL 904

Query: 449  DLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            DL  N +  +G K L +V +    N+  L+L  C +  +    +A ++ YN  +  LDL 
Sbjct: 905  DLGSNWLQDNGMKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVIVYNPNLRSLDLG 964

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
             N L+D+G K L  + +  N  +  + L +  +       ++ AL  N+   +  +NL  
Sbjct: 965  NNNLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNQ--RLIKMNLTQ 1022

Query: 568  NFL 570
            N L
Sbjct: 1023 NTL 1025


>gi|354474680|ref|XP_003499558.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 2 [Cricetulus griseus]
          Length = 1012

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 114/224 (50%), Gaps = 5/224 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  NS+GD G+  L+  L    G    L + +N+IS +G   + EY  +C+ L  + L
Sbjct: 767 LQLDHNSVGDVGVEQLLPCL----GVCTALYLRDNNISDRGVCTLIEYALHCEQLQKLAL 822

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L    N 
Sbjct: 823 FNNKLTDGCAYSMAKLLAHRQNFLSLRVGNNHITAAGAQVLAQGLKSNTSLQFLGFWGNS 882

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G  G +AL+E L  H +I  L L    IG+ GA+ +A ML  N ++  L L  N + DE
Sbjct: 883 VGDKGTQALAEALAGHQSIKWLSLVGNNIGSEGAQALAMMLEKNKSLEELCLEENHVCDE 942

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           G   L +  K  N +L  + L+ N I   GA A+ QAL  N  +
Sbjct: 943 GVYFLTEGLK-RNSSLKILKLSNNGITYGGAEALLQALDRNSTI 985



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 126/245 (51%), Gaps = 4/245 (1%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A +L++      L+L++N +   G   L   L       +L+L  N     G   L +
Sbjct: 753 ALAFVLRHLQRPVALQLDHNSVGDVGVEQLLPCL---GVCTALYLRDNNISDRGVCTLIE 809

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                + L++L L  N + D G    M+ L + +     L +GNN I+A GA  +A+ +K
Sbjct: 810 YALHCEQLQKLALFNNKLTD-GCAYSMAKLLAHRQNFLSLRVGNNHITAAGAQVLAQGLK 868

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
           +  SL ++  + N +GD+G + +A+AL  +++I  + L GNNI S+GA A+A +L+ N  
Sbjct: 869 SNTSLQFLGFWGNSVGDKGTQALAEALAGHQSIKWLSLVGNNIGSEGAQALAMMLEKNKS 928

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  L L  N +  +G   L+E LK + ++  LKL    I   GAE +   L  N+TI  +
Sbjct: 929 LEELCLEENHVCDEGVYFLTEGLKRNSSLKILKLSNNGITYGGAEALLQALDRNSTILEV 988

Query: 505 DLRAN 509
            LR N
Sbjct: 989 WLRGN 993



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 6/198 (3%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
            TL E+A        + +      D   + +A+ L + Q    +    N ITAAG +    
Sbjct: 806  TLIEYALHCEQLQKLALFNNKLTDGCAYSMAKLLAHRQNFLSLRVGNNHITAAGAQVLAQ 865

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
             L+SN +L+ L   GN +GD+G + L + L  +  ++ L L   ++  EGA+A+A +L+ 
Sbjct: 866  GLKSNTSLQFLGFWGNSVGDKGTQALAEALAGHQSIKWLSLVGNNIGSEGAQALAMMLEK 925

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN---YGGALGANALAKGLEGN 329
            N  L  L L  N +   G   L E L  NS+++ L L+ N   YG   GA AL + L+ N
Sbjct: 926  NKSLEELCLEENHVCDEGVYFLTEGLKRNSSLKILKLSNNGITYG---GAEALLQALDRN 982

Query: 330  KSLRELHLHGNSIGDEGI 347
             ++ E+ L GN+   E I
Sbjct: 983  STILEVWLRGNTFSLEEI 1000



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 87/174 (50%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 820 LALFNNKLTDGCAYSMAKLLAHRQNFLSLRVGNNHITAAGAQVLAQGLKSNTSLQFLGFW 879

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A    L  + ++K L+L GN IG EG + L  +L  N  +E L L    +
Sbjct: 880 GNSVGDKGTQALAEALAGHQSIKWLSLVGNNIGSEGAQALAMMLEKNKSLEELCLEENHV 939

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG   + E LK NS L++L+L+NN I Y G  +L +AL  NSTI  + L GN
Sbjct: 940 CDEGVYFLTEGLKRNSSLKILKLSNNGITYGGAEALLQALDRNSTILEVWLRGN 993



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 114/269 (42%), Gaps = 32/269 (11%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           + L+   ++ +   + GD G+  L   LG       +    N I+  G+           
Sbjct: 759 RHLQRPVALQLDHNSVGDVGVEQLLPCLG---VCTALYLRDNNISDRGVCTLIEYALHCE 815

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L+ L L  N + D     +  +L        L++ +  +   GA+ +A+ LK+N+ L+ 
Sbjct: 816 QLQKLALFNNKLTDGCAYSMAKLLAHRQNFLSLRVGNNHITAAGAQVLAQGLKSNTSLQF 875

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L    N +   G  +LAEAL  + +I+ L L GN  G+ GA ALA  LE NKSL EL L 
Sbjct: 876 LGFWGNSVGDKGTQALAEALAGHQSIKWLSLVGNNIGSEGAQALAMMLEKNKSLEELCLE 935

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N + DEG+  L  GL  R   L +L + NN I+                          
Sbjct: 936 ENHVCDEGVYFLTEGL-KRNSSLKILKLSNNGITYG------------------------ 970

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNI 427
               GAE +  AL +N TI  + L GN  
Sbjct: 971 ----GAEALLQALDRNSTILEVWLRGNTF 995


>gi|154332027|ref|XP_001561830.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059151|emb|CAM36849.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 442

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 179/383 (46%), Gaps = 55/383 (14%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           K +  VLQ       ++L+G  +G  G   +   L  N  V  L LS  +L D+GA +IA
Sbjct: 29  KRWRSVLQET----RVDLAGRALGPRGALIVGTALFRNTYVTFLDLSHNELGDDGAISIA 84

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
            +L+ N+ ++ L L++N +  +G  +LA A + N     +  +G  G            +
Sbjct: 85  SMLRGNTHVQYLNLSHNNMTDAGGIALASAFIPN-----VSPSGQPG------------Q 127

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNC 386
            N++L  L L GN +GD+ + A+ +  +  +  L  +D+  N++   G   +   Y +N 
Sbjct: 128 WNRTLFTLVLMGNRLGDDTLLAMGNAAACHR-DLTRVDLSWNTVGENGTKCLMRAYERN- 185

Query: 387 KSLLWINLYMNDIGDEGAEKIADALKQN--RTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             L    L  N IGDEGA  + +AL+++  +T TT++L  N+I   GA A+ R++  +S+
Sbjct: 186 -PLCVYELAANAIGDEGAVYLCEALQRHGGKTQTTLNLYRNSISCPGAEAVGRLVASSSI 244

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  + LA N IG  G +AL   L                  + A  +A       T+  L
Sbjct: 245 VQDVSLACNTIGFKGVQALQRQL------------------TDAAVIASC-----TLRSL 281

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           +L  N + DEGA  +A   K    +L  +D++ N+I D GA AI  A   N     T L 
Sbjct: 282 NLSDNWIGDEGAASVAAIIKADLPSLERLDVSENKITDVGATAIITAALQN-----THLL 336

Query: 565 LANNFLTKFGQSALTDAKDLVYE 587
           L N    + G  A+     L++E
Sbjct: 337 LLNCEANRLGPKAVDAVVRLIHE 359



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 161/375 (42%), Gaps = 58/375 (15%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + VD++GR  G  G   +  +L  N     V+F                         L+
Sbjct: 38  TRVDLAGRALGPRGALIVGTALFRNTY---VTF-------------------------LD 69

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N +GD+G   +  +L  N  V+ L LS  ++ D G  A+A     N           
Sbjct: 70  LSHNELGDDGAISIASMLRGNTHVQYLNLSHNNMTDAGGIALASAFIPN----------- 118

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +  SG     +    N T+ +L L GN  G     A+      ++ L  + L  N++G+
Sbjct: 119 -VSPSG-----QPGQWNRTLFTLVLMGNRLGDDTLLAMGNAAACHRDLTRVDLSWNTVGE 172

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC--KSLLWINLYMNDIGDE 402
            G + LM   +  +  L V ++  N+I  +GA ++ E ++    K+   +NLY N I   
Sbjct: 173 NGTKCLMR--AYERNPLCVYELAANAIGDEGAVYLCEALQRHGGKTQTTLNLYRNSISCP 230

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT-----SLDLAYNPIGA 457
           GAE +   +  +  +  + L  N I  KG  A+ R L D +VI      SL+L+ N IG 
Sbjct: 231 GAEAVGRLVASSSIVQDVSLACNTIGFKGVQALQRQLTDAAVIASCTLRSLNLSDNWIGD 290

Query: 458 DGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
           +GA +++ ++K    ++  L +   +I   GA  +      N  + +L+  AN L   G 
Sbjct: 291 EGAASVAAIIKADLPSLERLDVSENKITDVGATAIITAALQNTHLLLLNCEANRL---GP 347

Query: 517 KCLAQSFKVVNEALT 531
           K +    ++++E  T
Sbjct: 348 KAVDAVVRLIHETRT 362



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 26/265 (9%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R   ++ + G   GD+ L  +  +   ++    V  + N +   G K      + N  L 
Sbjct: 130 RTLFTLVLMGNRLGDDTLLAMGNAAACHRDLTRVDLSWNTVGENGTKCLMRAYERN-PLC 188

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVER--LQLSSVDLRDEGAKAIAELLKNNSILRVL 279
              L+ N IGDEG   LC+ L  + G  +  L L    +   GA+A+  L+ ++SI++ +
Sbjct: 189 VYELAANAIGDEGAVYLCEALQRHGGKTQTTLNLYRNSISCPGAEAVGRLVASSSIVQDV 248

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L  N I + G  +L   L + + I S                        +LR L+L  
Sbjct: 249 SLACNTIGFKGVQALQRQLTDAAVIASC-----------------------TLRSLNLSD 285

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG  ++ + + +    L  LD+  N I+  GA  +         LL +N   N +
Sbjct: 286 NWIGDEGAASVAAIIKADLPSLERLDVSENKITDVGATAIITAALQNTHLLLLNCEANRL 345

Query: 400 GDEGAEKIADALKQNRTITTIDLGG 424
           G +  + +   + + RT+ ++++ G
Sbjct: 346 GPKAVDAVVRLIHETRTLKSLNVAG 370


>gi|399498110|emb|CCG20383.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 30/316 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSID 534
           L + FK   E L S++
Sbjct: 487 LKEIFKKSPEMLASLE 502



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLLQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  A  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  N  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 10/244 (4%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
               +   +    ++G+ G   + + L   + +  LDLR N    E    L ++    +E
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHE 354

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLV 585
            LT I L++  + D+GA AIA ALK +   ++  L +A N +T     A+     AK L+
Sbjct: 355 NLTEIYLSYLNLEDEGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 586 YEMS 589
            ++S
Sbjct: 414 AKLS 417


>gi|29838727|gb|AAN52936.1| NOD2 [Mus musculus]
 gi|29838787|gb|AAN57788.1| NOD2 [Mus musculus]
 gi|29838823|gb|AAN57792.1| NOD2 [Mus musculus]
 gi|29838847|gb|AAN62472.1| NOD2 [Mus musculus]
 gi|29838883|gb|AAN57790.1| NOD2 [Mus musculus]
 gi|29838907|gb|AAN59991.1| NOD2 [Mus musculus]
 gi|29839027|gb|AAN60737.1| NOD2 [Mus musculus]
 gi|29839051|gb|AAN62469.1| NOD2 [Mus musculus]
 gi|29839087|gb|AAN78330.1| NOD2 [Mus musculus]
          Length = 1013

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 282 NNNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGN 329
             +M    GF  L  +L E          +R L   HL   +   G     ALA  L+  
Sbjct: 703 TKSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHL 762

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +    L L  NS+GD G+  L   L    G    L + +N+IS +GA  + E    C+ L
Sbjct: 763 QRPVALQLDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQL 818

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L 
Sbjct: 819 QKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLG 878

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +G  G +AL+EV+  H N+  L L    IG+ GA+ +A ML  N ++  L L  N
Sbjct: 879 FWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEEN 938

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + DEG   LA+  K  N  L  + L+ N I   GA A+ QAL  N  +
Sbjct: 939 HICDEGVYSLAEGLK-RNSTLKFLKLSNNGITYRGAEALLQALSRNSAI 986



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 990  WLRGNTFSLEEIQTLS 1005



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|29838703|gb|AAN52934.1| NOD2 [Mus musculus]
          Length = 1013

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 282 NNNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGN 329
             +M    GF  L  +L E          +R L   HL   +   G     ALA  L+  
Sbjct: 703 TKSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHL 762

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +    L L  NS+GD G+  L   L    G    L + +N+IS +GA  + E    C+ L
Sbjct: 763 QRPVALQLDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQL 818

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L 
Sbjct: 819 QKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLG 878

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +G  G +AL+EV+  H N+  L L    IG+ GA+ +A ML  N ++  L L  N
Sbjct: 879 FWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEEN 938

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + DEG   LA+  K  N  L  + L+ N I   GA A+ QAL  N  +
Sbjct: 939 HICDEGVYSLAEGLK-RNSTLKFLKLSNNGITYRGAEALLQALSRNSAI 986



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 990  WLRGNTFSLEEIQTLS 1005



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|426367312|ref|XP_004050677.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14
           [Gorilla gorilla gorilla]
          Length = 1093

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 154/319 (48%), Gaps = 6/319 (1%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L   L   N  ++ L L        G   ++ 
Sbjct: 665 LCSVLHTNEHLRELDLCHSNLDKSAMNILHHELRHPNCKLQKLLLKF-ITFPDGCQDIST 723

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  NK+L  L L G+ IGD G+++L   L   + KL  L + + +++     +++  + 
Sbjct: 724 SLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALI 783

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 784 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNK 843

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 844 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRHCHFTSLSSEYLSTSLLHNKSLT 903

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            LDL +N L+D G K L   F+  +  L  ++L    + +     +A  +  N ++   S
Sbjct: 904 HLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLR--S 961

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+L NN L   G   L DA
Sbjct: 962 LDLGNNDLQDDGVKILCDA 980



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 4/306 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD G+  L E+L + +   + +   +  +T          L  + +L  LNL
Sbjct: 734  LDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRSQSLIFLNL 793

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GV+ LC+ L      +ERL L S  L + G + ++  L +N  L  L L +N
Sbjct: 794  STNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRLTHLCLADN 853

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   +++AL     T++SL L   +  +L +  L+  L  NKSL  L L  N + 
Sbjct: 854  VLGDGGVKLMSDALQHAQCTLKSLVLRHCHFTSLSSEYLSTSLLHNKSLTHLDLGSNWLQ 913

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D G++ L          L  L++    ++      +A  I N  +L  ++L  ND+ D+G
Sbjct: 914  DNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQDDG 973

Query: 404  AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + DAL+  N  I  + L    + S     ++  L  N  +  ++L  N +G +G   
Sbjct: 974  VKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEGIVK 1033

Query: 463  LSEVLK 468
            L +VLK
Sbjct: 1034 LYKVLK 1039



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 150/340 (44%), Gaps = 16/340 (4%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      
Sbjct: 717  GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I+  L  +  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISNALIRSQSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  NK L  L L  N +GD G++ +   L   +  L  L + +   ++  + +++  
Sbjct: 836  SLALISNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRHCHFTSLSSEYLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            + + KSL  ++L  N + D G + + D  +     +  ++L G  + +     +A V+ +
Sbjct: 896  LLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  + SLDL  N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  
Sbjct: 956  NPNLRSLDLGNNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKR 1015

Query: 501  ISILDLRANGLRDEG----------AKCLAQSFKVVNEAL 530
            +  ++L  N L  EG           KC  Q   +  EA 
Sbjct: 1016 LIKMNLTQNTLGYEGIVKLYKVLKSPKCKLQVLGLCKEAF 1055



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 169/363 (46%), Gaps = 7/363 (1%)

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLC-DILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             VL +N  L+ L+L  + +    +  L  ++   N  +++L L  +   D G + I+  L
Sbjct: 667  SVLHTNEHLRELDLCHSNLDKSAMNILHHELRHPNCKLQKLLLKFITFPD-GCQDISTSL 725

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN 329
             +N  L  L+L  + I  +G  SL EAL      +++L L            ++  L  +
Sbjct: 726  IHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRS 785

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL  L+L  N++ D+G++ L   L   K  L  L + +  ++  G  +++  + + K L
Sbjct: 786  QSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRL 845

Query: 390  LWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              + L  N +GD G + ++DAL+  + T+ ++ L   +  S  +  ++  L  N  +T L
Sbjct: 846  THLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRHCHFTSLSSEYLSTSLLHNKSLTHL 905

Query: 449  DLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            DL  N +  +G K L +V +    N+  L+L  C +  +    +A ++  N  +  LDL 
Sbjct: 906  DLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLG 965

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
             N L+D+G K L  + +  N  +  + L +  +       ++ AL  N+   +  +NL  
Sbjct: 966  NNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNK--RLIKMNLTQ 1023

Query: 568  NFL 570
            N L
Sbjct: 1024 NTL 1026


>gi|28386271|gb|AAH44774.1| Nod2 protein [Mus musculus]
          Length = 1045

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 773  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 826

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 827  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 886

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 887  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 945

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 946  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 1005

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 1006 EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1037



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 282  NNNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGN 329
              +M    GF  L  +L E          +R L   HL   +   G     ALA  L+  
Sbjct: 735  TKSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHL 794

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +    L L  NS+GD G+  L   L    G    L + +N+IS +GA  + E    C+ L
Sbjct: 795  QRPVALQLDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQL 850

Query: 390  LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
              + L+ N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L 
Sbjct: 851  QKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLG 910

Query: 450  LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
               N +G  G +AL+EV+  H N+  L L    IG+ GA+ +A ML  N ++  L L  N
Sbjct: 911  FWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEEN 970

Query: 510  GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
             + DEG   LA+  K  N  L  + L+ N I   GA A+ QAL  N  +
Sbjct: 971  HICDEGVYSLAEGLK-RNSTLKFLKLSNNGITYRGAEALLQALSRNSAI 1018



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 838  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 897

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 898  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 957

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 958  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 1017

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 1018 ILEVWLRGNTFSLEEIQT----LSSRDARL 1043



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 786  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 842

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 843  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 901

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 902  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 961

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 962  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 1021

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 1022 WLRGNTFSLEEIQTLS 1037



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 853  LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 912

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 913  GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 972

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
             DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 973  CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 1026


>gi|92098299|gb|AAI15271.1| Zgc:136791 [Danio rerio]
          Length = 399

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 10/290 (3%)

Query: 201 GITAAGIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDL 258
           GI+  G  A    L+SN + L+ L+LS N +GD GVK L   L D +  +E+L+L    +
Sbjct: 106 GISDKGCAALASALRSNSSNLRELDLSYNIVGDSGVKLLSAGLKDPHCKLEKLRLRCCGV 165

Query: 259 RDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
            DEG   +A +L++NS  LR LEL+ N+        L  A L++   +   L   Y G  
Sbjct: 166 SDEGCADLASVLRSNSSNLRELELSKNINVGDSGVKLLSAGLKDPHCKLEKLRLGYCGVS 225

Query: 318 --GANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             G  ALA  L  N S LREL L  N I D G++ L +GL   + KL  L + N  +S K
Sbjct: 226 DEGCAALASVLRSNSSNLRELDLSDNKIVDSGVKRLSAGLKDPQCKLETLRLINCDVSGK 285

Query: 375 GAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGA 432
           G   +A  ++ N  +L  +NL  N +GD G ++++  LK     +  + L    +     
Sbjct: 286 GCAALASALRSNSSNLRELNLSENKVGDSGVKRLSAGLKDPHCKLEKLTLNYCGVSDASC 345

Query: 433 SAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVL-KFHGNINTLKLGW 480
           + +A  L+ NS  +  L+L +N +   G K LS++    H  + TL + W
Sbjct: 346 ADLASALRSNSSNLRELNLKWNRVEGIGVKWLSDLRDDPHYKLETLHISW 395



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 118/278 (42%), Gaps = 38/278 (13%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN--CKSLLWINLYMNDI 399
           I D+G  AL S L S    L  LD+  N +   G   ++  +K+  CK L  + L    +
Sbjct: 107 ISDKGCAALASALRSNSSNLRELDLSYNIVGDSGVKLLSAGLKDPHCK-LEKLRLRCCGV 165

Query: 400 GDEGAEKIADALKQNRT-------------------------------ITTIDLGGNNIH 428
            DEG   +A  L+ N +                               +  + LG   + 
Sbjct: 166 SDEGCADLASVLRSNSSNLRELELSKNINVGDSGVKLLSAGLKDPHCKLEKLRLGYCGVS 225

Query: 429 SKGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGAS 486
            +G +A+A VL+ NS  +  LDL+ N I   G K LS  LK     + TL+L  C +   
Sbjct: 226 DEGCAALASVLRSNSSNLRELDLSDNKIVDSGVKRLSAGLKDPQCKLETLRLINCDVSGK 285

Query: 487 GAEFVADMLRYNNT-ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
           G   +A  LR N++ +  L+L  N + D G K L+   K  +  L  + L +  + D   
Sbjct: 286 GCAALASALRSNSSNLRELNLSENKVGDSGVKRLSAGLKDPHCKLEKLTLNYCGVSDASC 345

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
             +A AL++N    +  LNL  N +   G   L+D +D
Sbjct: 346 ADLASALRSNSS-NLRELNLKWNRVEGIGVKWLSDLRD 382


>gi|29838667|gb|AAN52482.1| NOD2 [Mus musculus domesticus]
          Length = 1013

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 129/270 (47%), Gaps = 10/270 (3%)

Query: 294 LAEALLENSTIRSL---HLNGNYG--GALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           + E  L    +R L   HL   +   G     ALA  L+  +    L L  NS+GD G+ 
Sbjct: 722 MQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDYNSVGDVGVE 781

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
            L   L    G    L + +N+IS +GA  + E    C+ L  + L+ N + D  A  +A
Sbjct: 782 QLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMA 837

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L   +   ++ +G N+I + GA  +A+ LK N+ +  L    N +G  G +AL+EV+ 
Sbjct: 838 KLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVA 897

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
            H N+  L L    IG+ GA+ +A ML  N ++  L L  N + DEG   LA+  K  N 
Sbjct: 898 DHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLK-RNS 956

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            L  + L+ N I   GA A+ QAL  N  +
Sbjct: 957 TLKFLKLSNNGITYRGAEALLQALSRNSAI 986



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 990  WLRGNTFSLEEIQTLS 1005



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|74154099|dbj|BAE43401.1| unnamed protein product [Mus musculus]
          Length = 1013

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 282 NNNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGN 329
             +M    GF  L  +L E          +R L   HL   +   G     ALA  L+  
Sbjct: 703 TKSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHL 762

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +    L L  NS+GD G+  L   L    G    L + +N+IS +GA  + E    C+ L
Sbjct: 763 QRPVALQLDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQL 818

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L 
Sbjct: 819 QKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLG 878

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +G  G +AL+EV+  H N+  L L    IG+ GA+ +A ML  N ++  L L  N
Sbjct: 879 FWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEEN 938

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + DEG   LA+  K  N  L  + L+ N I   GA A+ QAL  N  +
Sbjct: 939 HICDEGVYSLAEGLK-RNSTLKFLKLSNNGITYRGAEALLQALSRNSAI 986



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 990  WLRGNTFSLEEIQTLS 1005



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|29838811|gb|AAN57791.1| NOD2 [Mus musculus]
 gi|29838871|gb|AAN63037.1| NOD2 [Mus musculus]
 gi|29838955|gb|AAN59994.1| NOD2 [Mus musculus]
          Length = 1013

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 282 NNNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGN 329
             +M    GF  L  +L E          +R L   HL   +   G     ALA  L+  
Sbjct: 703 TKSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHL 762

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +    L L  NS+GD G+  L   L    G    L + +N+IS +GA  + E    C+ L
Sbjct: 763 QRPVALQLDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQL 818

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L 
Sbjct: 819 QKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLG 878

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +G  G +AL+EV+  H N+  L L    IG+ GA+ +A ML  N ++  L L  N
Sbjct: 879 FWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEEN 938

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + DEG   LA+  K  N  L  + L+ N I   GA A+ QAL  N  +
Sbjct: 939 HICDEGVYSLAEGLK-RNSTLKFLKLSNNGITYRGAEALLQALSRNSAI 986



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 990  WLRGNTFSLEEIQTLS 1005



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|29838763|gb|AAN52939.1| NOD2 [Mus musculus]
          Length = 1013

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 282 NNNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGN 329
             +M    GF  L  +L E          +R L   HL   +   G     ALA  L+  
Sbjct: 703 TKSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHL 762

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +    L L  NS+GD G+  L   L    G    L + +N+IS +GA  + E    C+ L
Sbjct: 763 QRPVALQLDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQL 818

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L 
Sbjct: 819 QKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLG 878

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +G  G +AL+EV+  H N+  L L    IG+ GA+ +A ML  N ++  L L  N
Sbjct: 879 FWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEEN 938

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + DEG   LA+  K  N  L  + L+ N I   GA A+ QAL  N  +
Sbjct: 939 HICDEGVYSLAEGLK-RNSTLKFLKLSNNGITYRGAEALLQALSRNSAI 986



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 990  WLRGNTFSLEEIQTLS 1005



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|29838739|gb|AAN52937.1| NOD2 [Mus musculus]
 gi|29838835|gb|AAN62467.1| NOD2 [Mus musculus]
 gi|29838895|gb|AAN57793.1| NOD2 [Mus musculus]
 gi|29838919|gb|AAN78329.1| NOD2 [Mus musculus]
 gi|29838931|gb|AAN59992.1| NOD2 [Mus musculus]
 gi|29838943|gb|AAN59993.1| NOD2 [Mus musculus]
 gi|29838967|gb|AAN59995.1| NOD2 [Mus musculus]
 gi|29838979|gb|AAN60733.1| NOD2 [Mus musculus]
 gi|29838991|gb|AAN60734.1| NOD2 [Mus musculus]
 gi|29839039|gb|AAN62468.1| NOD2 [Mus musculus]
 gi|29839111|gb|AAN63036.1| NOD2 [Mus musculus]
 gi|29839123|gb|AAN63038.1| NOD2 [Mus musculus]
 gi|29839147|gb|AAN63040.1| NOD2 [Mus musculus]
 gi|29839159|gb|AAN63041.1| NOD2 [Mus musculus]
 gi|30017199|gb|AAN52478.1| NOD2 [Mus musculus]
 gi|30017211|gb|AAN84594.1| NOD2 [Mus musculus]
          Length = 1013

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 282 NNNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGN 329
             +M    GF  L  +L E          +R L   HL   +   G     ALA  L+  
Sbjct: 703 TKSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHL 762

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +    L L  NS+GD G+  L   L    G    L + +N+IS +GA  + E    C+ L
Sbjct: 763 QRPVALQLDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQL 818

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L 
Sbjct: 819 QKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLG 878

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +G  G +AL+EV+  H N+  L L    IG+ GA+ +A ML  N ++  L L  N
Sbjct: 879 FWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEEN 938

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + DEG   LA+  K  N  L  + L+ N I   GA A+ QAL  N  +
Sbjct: 939 HICDEGVYSLAEGLK-RNSTLKFLKLSNNGITYRGAEALLQALSRNSAI 986



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 990  WLRGNTFSLEEIQTLS 1005



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|290998894|ref|XP_002682015.1| predicted protein [Naegleria gruberi]
 gi|284095641|gb|EFC49271.1| predicted protein [Naegleria gruberi]
          Length = 413

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 159/310 (51%), Gaps = 41/310 (13%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F  E++  +S+D+     G EG+ +++E     +    ++ +   I+  G K    + Q 
Sbjct: 128 FISEMKQLTSLDIYSNRIGVEGVKYISEM----KQLTSLNISEIEISDEGAKYISEMKQ- 182

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              L +L +  N IGDEG K + ++      +  L +   ++ DEGAK I+E+   N ++
Sbjct: 183 ---LTSLYIHNNEIGDEGSKHISEM----KQLTSLNIGCNEISDEGAKHISEM---NQLI 232

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L +  N I   GF  ++E       + SL +  +  G  GA  +++     K L  L+
Sbjct: 233 S-LSIGYNRIGDEGFKYISEM----KQLTSLDITDDEIGDEGAKYISEM----KQLTSLN 283

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           +  N IGDEG + +     S   +L  LDI    IS +G    A+YI   K L+W+ +  
Sbjct: 284 IGFNEIGDEGAKYI-----SELKQLTSLDISETEISDEG----AKYISEMKQLIWLTIGY 334

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N+I D+GA+ I++ LKQ   +T++D+  N I ++GA  I+ +   N +I SL++ YN IG
Sbjct: 335 NEISDKGAKYISE-LKQ---LTSLDITDNKIGNEGAKYISEM---NQLI-SLNIGYNRIG 386

Query: 457 ADGAKALSEV 466
            +GAK +SE+
Sbjct: 387 DEGAKYISEM 396



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 167/318 (52%), Gaps = 43/318 (13%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L +L++  N IG EGVK + ++      +  L +S +++ DEGAK I+E+ +    L  L
Sbjct: 135 LTSLDIYSNRIGVEGVKYISEM----KQLTSLNISEIEISDEGAKYISEMKQ----LTSL 186

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            ++NN I   G   ++E       + SL++  N     GA  ++   E N+ L  L +  
Sbjct: 187 YIHNNEIGDEGSKHISEM----KQLTSLNIGCNEISDEGAKHIS---EMNQ-LISLSIGY 238

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG + +     S   +L  LDI ++ I  +GA    +YI   K L  +N+  N+I
Sbjct: 239 NRIGDEGFKYI-----SEMKQLTSLDITDDEIGDEGA----KYISEMKQLTSLNIGFNEI 289

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           GDEGA+ I++ LKQ   +T++D+    I  +GA  I+ + +    +  L + YN I   G
Sbjct: 290 GDEGAKYISE-LKQ---LTSLDISETEISDEGAKYISEMKQ----LIWLTIGYNEISDKG 341

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           AK +SE+      + +L +   +IG  GA+++++M   N  IS L++  N + DEGAK +
Sbjct: 342 AKYISEL----KQLTSLDITDNKIGNEGAKYISEM---NQLIS-LNIGYNRIGDEGAKYI 393

Query: 520 AQSFKVVNEALTSIDLAF 537
           ++  ++   +L  I L F
Sbjct: 394 SEMKQLT--SLRQISLGF 409



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 141/263 (53%), Gaps = 36/263 (13%)

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           AK +   K L  L++H N IGDEG + +     S   +L  L+IG N IS +GA H++E 
Sbjct: 174 AKYISEMKQLTSLYIHNNEIGDEGSKHI-----SEMKQLTSLNIGCNEISDEGAKHISE- 227

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
                 L+ +++  N IGDEG + I++     + +T++D+  + I  +GA  I+ + +  
Sbjct: 228 ---MNQLISLSIGYNRIGDEGFKYISEM----KQLTSLDITDDEIGDEGAKYISEMKQ-- 278

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +TSL++ +N IG +GAK +SE+      + +L +   +I   GA+++++M      + 
Sbjct: 279 --LTSLNIGFNEIGDEGAKYISEL----KQLTSLDISETEISDEGAKYISEM----KQLI 328

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L +  N + D+GAK +++      + LTS+D+  N+I ++GA  I++  +      + S
Sbjct: 329 WLTIGYNEISDKGAKYISEL-----KQLTSLDITDNKIGNEGAKYISEMNQ------LIS 377

Query: 563 LNLANNFLTKFGQSALTDAKDLV 585
           LN+  N +   G   +++ K L 
Sbjct: 378 LNIGYNRIGDEGAKYISEMKQLT 400



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 118/225 (52%), Gaps = 43/225 (19%)

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADA--------------------LKQNRTITTID 421
           +I   K L  +++Y N IG EG + I++                     + + + +T++ 
Sbjct: 128 FISEMKQLTSLDIYSNRIGVEGVKYISEMKQLTSLNISEIEISDEGAKYISEMKQLTSLY 187

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           +  N I  +G+  I+ + +    +TSL++  N I  +GAK +SE+      + +L +G+ 
Sbjct: 188 IHNNEIGDEGSKHISEMKQ----LTSLNIGCNEISDEGAKHISEM----NQLISLSIGYN 239

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           +IG  G +++++M      ++ LD+  + + DEGAK +++      + LTS+++ FNEI 
Sbjct: 240 RIGDEGFKYISEM----KQLTSLDITDDEIGDEGAKYISEM-----KQLTSLNIGFNEIG 290

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 586
           D+GA  I++ LK      +TSL+++   ++  G   +++ K L++
Sbjct: 291 DEGAKYISE-LK-----QLTSLDISETEISDEGAKYISEMKQLIW 329



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 50/189 (26%)

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR------YN 498
           +TSLD+  N IG +G K +SE+      + +L +   +I   GA+++++M +      +N
Sbjct: 135 LTSLDIYSNRIGVEGVKYISEM----KQLTSLNISEIEISDEGAKYISEMKQLTSLYIHN 190

Query: 499 NTI--------------SILDLRANGLRDEGAKCLA-----------------QSFKVVN 527
           N I              + L++  N + DEGAK ++                 + FK ++
Sbjct: 191 NEIGDEGSKHISEMKQLTSLNIGCNEISDEGAKHISEMNQLISLSIGYNRIGDEGFKYIS 250

Query: 528 E--ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
           E   LTS+D+  +EI D+GA  I++  +      +TSLN+  N +   G   +++ K L 
Sbjct: 251 EMKQLTSLDITDDEIGDEGAKYISEMKQ------LTSLNIGFNEIGDEGAKYISELKQLT 304

Query: 586 -YEMSEKEV 593
             ++SE E+
Sbjct: 305 SLDISETEI 313



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 50/202 (24%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           +  E++  +S+D++    GDEG  +++E                                
Sbjct: 248 YISEMKQLTSLDITDDEIGDEGAKYISEMK------------------------------ 277

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              L +LN+  N IGDEG K + ++      +  L +S  ++ DEGAK I+E+ +    L
Sbjct: 278 --QLTSLNIGFNEIGDEGAKYISEL----KQLTSLDISETEISDEGAKYISEMKQ----L 327

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L +  N I   G    A+ + E   + SL +  N  G  GA  ++   E N+ L  L+
Sbjct: 328 IWLTIGYNEISDKG----AKYISELKQLTSLDITDNKIGNEGAKYIS---EMNQ-LISLN 379

Query: 337 LHGNSIGDEGIRAL--MSGLSS 356
           +  N IGDEG + +  M  L+S
Sbjct: 380 IGYNRIGDEGAKYISEMKQLTS 401


>gi|399498040|emb|CCG20348.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L    + DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLDLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   D+
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLDL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEG   IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLDLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++ ++ D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLDLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +G  AIA ALK +   ++  L +A N +T
Sbjct: 369 EGVIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|399498032|emb|CCG20344.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEG   IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +G  AIA ALK +   ++  L +A N +T
Sbjct: 369 EGVIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|301785165|ref|XP_002928006.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like
            [Ailuropoda melanoleuca]
          Length = 1059

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 155/343 (45%), Gaps = 18/343 (5%)

Query: 190  QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDIL------V 243
            QT    S   + +  A  K     L +N  L  L L  N +G  GV+ LC  L      +
Sbjct: 683  QTLPAPSPEKHLLPEAYSKQLAAALSTNPNLTELVLYRNALGSRGVRLLCQGLRHPGCKL 742

Query: 244  DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
             N  ++R  + S   +D  A  +A    N S+ RV +L+ N +   G   L E L     
Sbjct: 743  QNLSLKRCCVPSSACQDLAAALVA----NRSLTRV-DLSCNGLGLPGVRLLCEGLQHPGC 797

Query: 304  -IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             ++++ L      A     +A  L  N+ L EL L GN + D G+R L  GL     +L 
Sbjct: 798  RLQAIQLRKCQLEAGACREIASVLSTNRHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQ 857

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTID 421
            +L +    ++A     +A  +   +SL+ ++L +ND+GD GA  + + L+  + ++ T+ 
Sbjct: 858  ILWLKICHLTAAACEELASTLAVNRSLMELDLSLNDLGDPGALLLCEGLRHPQCSLQTVR 917

Query: 422  LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW- 480
            LG   + S     I  VL+ N  +  LDL++N +G  G   L E L+ H      KL W 
Sbjct: 918  LGICRLSSATCEGICTVLRVNPHLRELDLSFNDLGDTGMWPLCEGLR-HPTCRLQKL-WL 975

Query: 481  --CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
              C + A   E ++  L  + T++ L L  N L + G + L +
Sbjct: 976  DSCGLTAKACEDLSSALGVSQTLTELYLTNNALGNAGVRLLCK 1018



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 30/265 (11%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           +  LA  L  N +L EL L+ N++G  G+R L  GL     KL  L +    + +     
Sbjct: 700 SKQLAAALSTNPNLTELVLYRNALGSRGVRLLCQGLRHPGCKLQNLSLKRCCVPSSACQD 759

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIAR 437
           +A  +   +SL  ++L  N +G  G   + + L+     +  I L    + +     IA 
Sbjct: 760 LAAALVANRSLTRVDLSCNGLGLPGVRLLCEGLQHPGCRLQAIQLRKCQLEAGACREIAS 819

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLR 496
           VL  N  +  LDL  N +   G + L + L+  G  +  L L  C + A+  E +A  L 
Sbjct: 820 VLSTNRHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQILWLKICHLTAAACEELASTLA 879

Query: 497 YNNTISILDLRANGLRDEGA----------KCLAQSFKV------------------VNE 528
            N ++  LDL  N L D GA          +C  Q+ ++                  VN 
Sbjct: 880 VNRSLMELDLSLNDLGDPGALLLCEGLRHPQCSLQTVRLGICRLSSATCEGICTVLRVNP 939

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALK 553
            L  +DL+FN++ D G + + + L+
Sbjct: 940 HLRELDLSFNDLGDTGMWPLCEGLR 964



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 5/315 (1%)

Query: 263  AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA 321
            +K +A  L  N  L  L L  N +   G   L + L      +++L L      +     
Sbjct: 700  SKQLAAALSTNPNLTELVLYRNALGSRGVRLLCQGLRHPGCKLQNLSLKRCCVPSSACQD 759

Query: 322  LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            LA  L  N+SL  + L  N +G  G+R L  GL     +L  + +    + A     +A 
Sbjct: 760  LAAALVANRSLTRVDLSCNGLGLPGVRLLCEGLQHPGCRLQAIQLRKCQLEAGACREIAS 819

Query: 382  YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLK 440
             +   + L+ ++L  N + D G   +   L+     +  + L   ++ +     +A  L 
Sbjct: 820  VLSTNRHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQILWLKICHLTAAACEELASTLA 879

Query: 441  DNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNN 499
             N  +  LDL+ N +G  GA  L E L+    ++ T++LG C++ ++  E +  +LR N 
Sbjct: 880  VNRSLMELDLSLNDLGDPGALLLCEGLRHPQCSLQTVRLGICRLSSATCEGICTVLRVNP 939

Query: 500  TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
             +  LDL  N L D G   L +  +     L  + L    +       ++ AL  ++   
Sbjct: 940  HLRELDLSFNDLGDTGMWPLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSALGVSQ--T 997

Query: 560  VTSLNLANNFLTKFG 574
            +T L L NN L   G
Sbjct: 998  LTELYLTNNALGNAG 1012



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 3/206 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIAL 220
            R    +D++G    D GL  L + L +     ++ +     +TAA  +     L  N +L
Sbjct: 825  RHLVELDLTGNVLEDLGLRLLCQGLRHPGCRLQILWLKICHLTAAACEELASTLAVNRSL 884

Query: 221  KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
              L+LS N +GD G   LC+ L      ++ ++L    L     + I  +L+ N  LR L
Sbjct: 885  MELDLSLNDLGDPGALLLCEGLRHPQCSLQTVRLGICRLSSATCEGICTVLRVNPHLREL 944

Query: 280  ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +L+ N +  +G   L E L   +  ++ L L+     A     L+  L  +++L EL+L 
Sbjct: 945  DLSFNDLGDTGMWPLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSALGVSQTLTELYLT 1004

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVL 364
             N++G+ G+R L  GLS    KL VL
Sbjct: 1005 NNALGNAGVRLLCKGLSHPGCKLQVL 1030



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 7/257 (2%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R+ + VD+S    G  G+  L E L +     + +      + A   +    VL +N  L
Sbjct: 768  RSLTRVDLSCNGLGLPGVRLLCEGLQHPGCRLQAIQLRKCQLEAGACREIASVLSTNRHL 827

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL---LKNNSILR 277
              L+L+GN + D G++ LC  L  + G  RLQ+  + +    A A  EL   L  N  L 
Sbjct: 828  VELDLTGNVLEDLGLRLLCQGL-RHPGC-RLQILWLKICHLTAAACEELASTLAVNRSLM 885

Query: 278  VLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L+L+ N +   G   L E L     +++++ L      +     +   L  N  LREL 
Sbjct: 886  ELDLSLNDLGDPGALLLCEGLRHPQCSLQTVRLGICRLSSATCEGICTVLRVNPHLRELD 945

Query: 337  LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
            L  N +GD G+  L  GL     +L  L + +  ++AK    ++  +   ++L  + L  
Sbjct: 946  LSFNDLGDTGMWPLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSALGVSQTLTELYLTN 1005

Query: 397  NDIGDEGAEKIADALKQ 413
            N +G+ G   +   L  
Sbjct: 1006 NALGNAGVRLLCKGLSH 1022


>gi|242062340|ref|XP_002452459.1| hypothetical protein SORBIDRAFT_04g026160 [Sorghum bicolor]
 gi|241932290|gb|EES05435.1| hypothetical protein SORBIDRAFT_04g026160 [Sorghum bicolor]
          Length = 558

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S  +L+ L +  + I +E  K L +++     ++ L   
Sbjct: 234 LNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKVLHFH 293

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA  IAE++K +  +     +   I   G  +L+EAL   + ++ L L  N  
Sbjct: 294 NNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLF 353

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     AL+K L     L EL+L   ++ +EG  A++  L     +L VL++  N I+AK
Sbjct: 354 GVDAGLALSKTLPKLPDLVELYLSDLNLENEGTIAIVKALKQSAPQLEVLEMAGNEINAK 413

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
            A  +AE +   +SL  + L  N++ D GA  IA +L+   T +  +D+  N +   GA 
Sbjct: 414 AAPDLAECLTAMQSLKKLTLAENELKDGGAVIIAKSLEDGHTDLKELDVSTNMLQRVGAR 473

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             AR + D      L++  N I  +G   + E+LK
Sbjct: 474 CFARAVADKPAFVQLNINGNFISDEGIDEVKEILK 508



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 129/254 (50%), Gaps = 5/254 (1%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +K LEG+  LR L++  N++G++G+RA    L S++  L  L + N+ IS + A  ++E
Sbjct: 222 FSKALEGS-VLRYLNISDNALGEKGVRAFSELLKSQES-LEELYVMNDGISEEAAKALSE 279

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I   + L  ++ + N  GDEGA  IA+ +K++  + +       I S G  A++  L  
Sbjct: 280 LIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGT 339

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NT 500
            + +  LDL  N  G D   ALS+ L    ++  L L    +   G   +   L+ +   
Sbjct: 340 CTRLKKLDLRDNLFGVDAGLALSKTLPKLPDLVELYLSDLNLENEGTIAIVKALKQSAPQ 399

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           + +L++  N +  + A  LA+    + ++L  + LA NE++D GA  IA++L+      +
Sbjct: 400 LEVLEMAGNEINAKAAPDLAECLTAM-QSLKKLTLAENELKDGGAVIIAKSLEDGH-TDL 457

Query: 561 TSLNLANNFLTKFG 574
             L+++ N L + G
Sbjct: 458 KELDVSTNMLQRVG 471



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 130/286 (45%), Gaps = 32/286 (11%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S +R L+++ N  G  G  A ++ L+  +SL EL++  + I +E  +AL S L    
Sbjct: 226 LEGSVLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKAL-SELIPAT 284

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA ++AE +K   ++         IG +G   +++AL     + 
Sbjct: 285 EKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLK 344

Query: 419 TIDLGGN----------------------------NIHSKGASAIARVLKDNSV-ITSLD 449
            +DL  N                            N+ ++G  AI + LK ++  +  L+
Sbjct: 345 KLDLRDNLFGVDAGLALSKTLPKLPDLVELYLSDLNLENEGTIAIVKALKQSAPQLEVLE 404

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRA 508
           +A N I A  A  L+E L    ++  L L   ++   GA  +A  L   +T +  LD+  
Sbjct: 405 MAGNEINAKAAPDLAECLTAMQSLKKLTLAENELKDGGAVIIAKSLEDGHTDLKELDVST 464

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           N L+  GA+C A++      A   +++  N I D+G   + + LKA
Sbjct: 465 NMLQRVGARCFARAV-ADKPAFVQLNINGNFISDEGIDEVKEILKA 509



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 131/303 (43%), Gaps = 31/303 (10%)

Query: 144 GKLFRESKQTLNEFAKELR--AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           G+   E+   +  F+K L       +++S    G++G+   +E L   ++ EE+    +G
Sbjct: 209 GRPEDEALDVMRIFSKALEGSVLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDG 268

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I+    KA   ++ +   LK L+   N  GDEG   + +++  +  VE  + S+  +  +
Sbjct: 269 ISEEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSD 328

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL---------------LENS---- 302
           G  A++E L   + L+ L+L +N+       +L++ L               LEN     
Sbjct: 329 GGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSKTLPKLPDLVELYLSDLNLENEGTIA 388

Query: 303 ----------TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
                      +  L + GN   A  A  LA+ L   +SL++L L  N + D G   +  
Sbjct: 389 IVKALKQSAPQLEVLEMAGNEINAKAAPDLAECLTAMQSLKKLTLAENELKDGGAVIIAK 448

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L      L  LD+  N +   GA   A  + +  + + +N+  N I DEG +++ + LK
Sbjct: 449 SLEDGHTDLKELDVSTNMLQRVGARCFARAVADKPAFVQLNINGNFISDEGIDEVKEILK 508

Query: 413 QNR 415
             +
Sbjct: 509 AGK 511



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 101/247 (40%), Gaps = 30/247 (12%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
            E+ + L+E          +       GDEG  ++AE +  +   E    +A  I + G 
Sbjct: 271 EEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGG 330

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
            A    L +   LK L+L  N  G +    L   L     +  L LS ++L +EG  AI 
Sbjct: 331 VALSEALGTCTRLKKLDLRDNLFGVDAGLALSKTLPKLPDLVELYLSDLNLENEGTIAIV 390

Query: 268 ELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           + LK ++  L VLE+  N I+      LAE L    +++ L L  N     GA  +AK L
Sbjct: 391 KALKQSAPQLEVLEMAGNEINAKAAPDLAECLTAMQSLKKLTLAENELKDGGAVIIAKSL 450

Query: 327 E-GNKSLREL----------------------------HLHGNSIGDEGIRALMSGLSSR 357
           E G+  L+EL                            +++GN I DEGI  +   L + 
Sbjct: 451 EDGHTDLKELDVSTNMLQRVGARCFARAVADKPAFVQLNINGNFISDEGIDEVKEILKAG 510

Query: 358 KGKLAVL 364
           K  L VL
Sbjct: 511 KKSLDVL 517


>gi|328874934|gb|EGG23299.1| hypothetical protein DFA_05431 [Dictyostelium fasciculatum]
          Length = 669

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 159/359 (44%), Gaps = 24/359 (6%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           E ++ A   I   G  A  G L SN +LK L+LS N + ++    +   +  N  V  L 
Sbjct: 310 ESLNLAHTLIGDDGAMAIAGALHSNRSLKHLDLSFNCLENDAGCAIGAAIAKNQAVTTLL 369

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L      +   K I + LK N+ L +L+L+ N I   G  SLA +L  N T+  L L+ N
Sbjct: 370 LKRNQFGEHTVKVIGDALKTNTSLTLLDLSGNQIGLKGAKSLAFSLPLNKTLADLDLSYN 429

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL-----DIG 367
             G  G   +   L  N  L  L+L  N IG E  +++   L +   +   L     ++ 
Sbjct: 430 LLGDAGGKLIGDCLATNAGLVRLNLAANRIGVETCKSISQSLKNSNLQFNHLPSNQFNLD 489

Query: 368 NNSI------------------SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
              I                  S+    H+A    +   L WI L  N +GDEGA  +++
Sbjct: 490 RQDIPIIIHYFLRNKKSTFLTSSSPNIHHIASGQASLSKLRWICLDCNRVGDEGAIVLSE 549

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            +  N T+ +I L  N+I  +G  AI   L  N+ + +L L  N IG  GAK++ + L+ 
Sbjct: 550 VIANNSTLKSISLTNNHIGERGGKAIGESLMMNTKLINLQLDSNLIGPVGAKSIGDALRR 609

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
           +  + +L L   +I   G   + D L  NN++  L +R N    +  + L +S   ++E
Sbjct: 610 NTTLQSLGLSGNRIEDDGGRAINDALCDNNSLKALMIRNNSF-GQDLQSLIESLPQISE 667



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 165/352 (46%), Gaps = 3/352 (0%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  + ++ +  + + DE    L   L  N+G+  L  S   L DE  + +A +L+  
Sbjct: 160 LRVNPHISSITVMHSHLNDEDGVALFSALSGNSGLLHLNASFNQLGDESVRLLARMLECA 219

Query: 274 SI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL-EGNKS 331
              ++ L L  N I      +L +A++   T+  L ++ N  G  G  ++ + L   ++S
Sbjct: 220 GCKIKTLNLATNQITDDSMDALIDAIVGIDTLSELDISSNRIGERGGVSIGQRLIPHDRS 279

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           LR L L  N IG +   A+  GL++    +  L++ +  I   GA  +A  + + +SL  
Sbjct: 280 LRTLVLASNDIGPDAGMAIGQGLATPDIMIESLNLAHTLIGDDGAMAIAGALHSNRSLKH 339

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N + ++    I  A+ +N+ +TT+ L  N         I   LK N+ +T LDL+
Sbjct: 340 LDLSFNCLENDAGCAIGAAIAKNQAVTTLLLKRNQFGEHTVKVIGDALKTNTSLTLLDLS 399

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GAK+L+  L  +  +  L L +  +G +G + + D L  N  +  L+L AN +
Sbjct: 400 GNQIGLKGAKSLAFSLPLNKTLADLDLSYNLLGDAGGKLIGDCLATNAGLVRLNLAANRI 459

Query: 512 RDEGAKCLAQSFKVVNEALTSIDL-AFNEIRDDGAFAIAQALKANEDVAVTS 562
             E  K ++QS K  N     +    FN  R D    I   L+  +   +TS
Sbjct: 460 GVETCKSISQSLKNSNLQFNHLPSNQFNLDRQDIPIIIHYFLRNKKSTFLTS 511



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 177/390 (45%), Gaps = 25/390 (6%)

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGV-KC---LCDILVDNAGVERLQLSSVDL---R 259
           +  ++ +L  NI  +     G  IG   + KC     D L+D   V   +L S+ +   R
Sbjct: 63  LHKYNTLLNDNILTRLFEQEGESIGHLDLSKCKYFTIDGLIDQF-VRLPKLQSLKMQFSR 121

Query: 260 DEGAKAIAELLKN-NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL-----HLNGNY 313
              A +IA LL+N +S    L+++ NM +  G   +   L  N  I S+     HLN   
Sbjct: 122 QVDASSIARLLENTHSTFSHLDISCNM-NLHGSQFVGAPLRVNPHISSITVMHSHLNDED 180

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
           G AL +      L GN  L  L+   N +GDE +R L   L     K+  L++  N I+ 
Sbjct: 181 GVALFS-----ALSGNSGLLHLNASFNQLGDESVRLLARMLECAGCKIKTLNLATNQITD 235

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGA 432
                + + I    +L  +++  N IG+ G   I   L   +R++ T+ L  N+I     
Sbjct: 236 DSMDALIDAIVGIDTLSELDISSNRIGERGGVSIGQRLIPHDRSLRTLVLASNDIGPDAG 295

Query: 433 SAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
            AI + L    + I SL+LA+  IG DGA A++  L  + ++  L L +  +       +
Sbjct: 296 MAIGQGLATPDIMIESLNLAHTLIGDDGAMAIAGALHSNRSLKHLDLSFNCLENDAGCAI 355

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
              +  N  ++ L L+ N   +   K +  + K  N +LT +DL+ N+I   GA ++A +
Sbjct: 356 GAAIAKNQAVTTLLLKRNQFGEHTVKVIGDALKT-NTSLTLLDLSGNQIGLKGAKSLAFS 414

Query: 552 LKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           L  N+ +A   L+L+ N L   G   + D 
Sbjct: 415 LPLNKTLA--DLDLSYNLLGDAGGKLIGDC 442



 Score = 42.0 bits (97), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 2/113 (1%)

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
           C +   G++FV   LR N  IS + +  + L DE    L  +    N  L  ++ +FN++
Sbjct: 146 CNMNLHGSQFVGAPLRVNPHISSITVMHSHLNDEDGVALFSALSG-NSGLLHLNASFNQL 204

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEV 593
            D+    +A+ L+      + +LNLA N +T     AL DA   +  +SE ++
Sbjct: 205 GDESVRLLARMLEC-AGCKIKTLNLATNQITDDSMDALIDAIVGIDTLSELDI 256


>gi|399498060|emb|CCG20358.1| Ran GTPase activating protein 2 [Solanum tuberosum]
 gi|399498088|emb|CCG20372.1| Ran GTPase activating protein 2 [Solanum tuberosum]
 gi|399498108|emb|CCG20382.1| Ran GTPase activating protein 2 [Solanum vernei]
 gi|399498118|emb|CCG20387.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 30/316 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSID 534
           L + FK   E L S++
Sbjct: 487 LKEIFKKSPEMLASLE 502



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLLQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  A  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  N  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLS 417


>gi|29838715|gb|AAN52935.1| NOD2 [Mus musculus]
          Length = 1013

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
            +++F   G       AF  VLQ       L L  N +GD GV+ L   L    GV   L 
Sbjct: 741  KLTFCRVGPAECAALAF--VLQHLQRPVALQLDYNSVGDVGVEQLRPCL----GVCTALY 794

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D GA+ + E       L+ L L NN +  +   S+A+ L       SL +  N
Sbjct: 795  LRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNN 854

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL+ N SL+ L   GNS+GD+G +AL   ++  +  L  L +  N+I 
Sbjct: 855  HITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIG 913

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A  ++  KSL  + L  N I DEG   +A+ LK+N T+  + L  N I  +GA
Sbjct: 914  SMGAQALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGA 973

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             A+ + L  NS I  + L  N    +  + LS
Sbjct: 974  EALLQALSRNSAILEVWLRGNTFSLEEIQTLS 1005



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 282 NNNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGN 329
             +M    GF  L  +L E          +R L   HL   +   G     ALA  L+  
Sbjct: 703 TKSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHL 762

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +    L L  NS+GD G+  L   L    G    L + +N+IS +GA  + E    C+ L
Sbjct: 763 QRPVALQLDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGARTLVECALRCEQL 818

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L 
Sbjct: 819 QKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLG 878

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +G  G +AL+EV+  H N+  L L    IG+ GA+ +A ML  N ++  L L  N
Sbjct: 879 FWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEEN 938

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + DEG   LA+  K  N  L  + L+ N I   GA A+ QAL  N  +
Sbjct: 939 HICDEGVYSLAEGLK-RNSTLKFLKLSNNGITYRGAEALLQALSRNSAI 986



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 152  QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
            +TL E A        + +      D     +A+ L + Q    +    N ITAAG +   
Sbjct: 806  RTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLA 865

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
              L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+
Sbjct: 866  QGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLE 925

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
             N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N +
Sbjct: 926  KNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSA 985

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            + E+ L GN+   E I+     LSSR  +L
Sbjct: 986  ILEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +L++      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754  ALAFVLQHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGARTLVE 810

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 990  WLRGNTFSLEEIQTLS 1005



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|403292566|ref|XP_003937312.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Saimiri boliviensis boliviensis]
          Length = 1040

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 5/244 (2%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 775  GPTECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL----GACKALYLRDNNISDR 830

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E+  +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 831  GICKLIEHALHCEPLQKLALFNNKLTDGCAHSMAKLLACKQNFLALRLGNNHITATGAQV 890

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 891  LAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALSDHQSLRWLSLVGNNIGSVGAQALALM 950

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            L  N  +  L L  N L+DEG   LA+  K  N +L  + L+ N I   GA A+ QAL+ 
Sbjct: 951  LAKNVMLEELCLEENHLQDEGVCSLAEGLK-RNSSLKILKLSNNCITYLGAEALLQALER 1009

Query: 555  NEDV 558
            N+ +
Sbjct: 1010 NDTI 1013



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 133/267 (49%), Gaps = 4/267 (1%)

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            V    V  L+L+   +      A+A +L++      L+L+ N +   G   L   L    
Sbjct: 759  VRGLNVGHLKLTFCSVGPTECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---G 815

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
              ++L+L  N     G   L +     + L++L L  N + D G    M+ L + K    
Sbjct: 816  ACKALYLRDNNISDRGICKLIEHALHCEPLQKLALFNNKLTD-GCAHSMAKLLACKQNFL 874

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +GNN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L
Sbjct: 875  ALRLGNNHITATGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALSDHQSLRWLSL 934

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             GNNI S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    
Sbjct: 935  VGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKRNSSLKILKLSNNC 994

Query: 483  IGASGAEFVADMLRYNNTISILDLRAN 509
            I   GAE +   L  N+TI  + LR N
Sbjct: 995  ITYLGAEALLQALERNDTILEVWLRGN 1021



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 127/278 (45%), Gaps = 6/278 (2%)

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
            G N    +++F + G T     AF  VLQ       L L  N +GD GV+ L   L    
Sbjct: 761  GLNVGHLKLTFCSVGPTECAALAF--VLQHLRRPVALQLDYNSVGDIGVEQLLPCL---G 815

Query: 247  GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
              + L L   ++ D G   + E   +   L+ L L NN +      S+A+ L       +
Sbjct: 816  ACKALYLRDNNISDRGICKLIEHALHCEPLQKLALFNNKLTDGCAHSMAKLLACKQNFLA 875

Query: 307  LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
            L L  N+  A GA  LA+GL GN SL+ L   GN +GDEG +AL   LS  +  L  L +
Sbjct: 876  LRLGNNHITATGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALSDHQS-LRWLSL 934

Query: 367  GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
              N+I + GA  +A  +     L  + L  N + DEG   +A+ LK+N ++  + L  N 
Sbjct: 935  VGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKRNSSLKILKLSNNC 994

Query: 427  IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            I   GA A+ + L+ N  I  + L  N    +    LS
Sbjct: 995  ITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKLS 1032



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 87/169 (51%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITA G +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 863  MAKLLACKQNFLALRLGNNHITATGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEA 922

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L  N
Sbjct: 923  LSDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKRN 982

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +  L
Sbjct: 983  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 1031



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 79/149 (53%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +   +    G   LAE L  N + + + F  N +   G +A    L  + +L+ L
Sbjct: 873  FLALRLGNNHITATGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALSDHQSLRWL 932

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +L GN IG  G + L  +L  N  +E L L    L+DEG  ++AE LK NS L++L+L+N
Sbjct: 933  SLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKRNSSLKILKLSN 992

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N I Y G  +L +AL  N TI  + L GN
Sbjct: 993  NCITYLGAEALLQALERNDTILEVWLRGN 1021



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 92/209 (44%)

Query: 161  LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
            L A  ++ +   N  D G+  L E   + +  ++++   N +T     +   +L      
Sbjct: 814  LGACKALYLRDNNISDRGICKLIEHALHCEPLQKLALFNNKLTDGCAHSMAKLLACKQNF 873

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
              L L  N I   G + L + L  N  ++ L      + DEGA+A+AE L ++  LR L 
Sbjct: 874  LALRLGNNHITATGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALSDHQSLRWLS 933

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L  N I   G  +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N
Sbjct: 934  LVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKRNSSLKILKLSNN 993

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             I   G  AL+  L      L V   GN 
Sbjct: 994  CITYLGAEALLQALERNDTILEVWLRGNT 1022


>gi|399497984|emb|CCG20320.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEG   IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGADAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +G  AIA ALK +   ++  L +A N +T
Sbjct: 369 EGVIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|399497874|emb|CCG20265.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSGGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSGGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSGGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLLQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G  G   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSGGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  A  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  N  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +   G   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSGGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSGGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSGGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLS 417


>gi|224001524|ref|XP_002290434.1| hypothetical protein THAPSDRAFT_262646 [Thalassiosira pseudonana
           CCMP1335]
 gi|220973856|gb|EED92186.1| hypothetical protein THAPSDRAFT_262646 [Thalassiosira pseudonana
           CCMP1335]
          Length = 969

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 178/369 (48%), Gaps = 14/369 (3%)

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
           D   Q+  A++ L+L  + + D  +  L   LVDN  V  L L   ++  EGA+ +   L
Sbjct: 530 DDDWQAQAAVERLSLRNSNVDDTELSSLSLALVDNTAVTHLWLGDNNITSEGAEYLIGTL 589

Query: 271 KNNSILRVLELNNNM-IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           ++N+ +  +EL  N  ID    +S++ AL++N +I  L+L  N     GA +  + LE N
Sbjct: 590 ESNNTIVYVELEGNRGIDDDIVSSISLALVDNKSITHLNLANNAITTDGAESTLQSLEAN 649

Query: 330 -KSLRELHLHG-NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
             SL +L L   + +       ++  L++ K  +  L + N          ++  + + +
Sbjct: 650 DPSLVDLMLDDVDLVQSPEAEPILDALAANK-HVTSLSLNNTCFDDSLIATLSLALVDNR 708

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI---HSKGASAIARVLKDNSV 444
           S+  I+L  N I  EG E +   L  N  I  +DL GN      S  A  +   L  NSV
Sbjct: 709 SITHISLRDNKITSEGCEYLMGTLDSNTKIIHLDLTGNPTDLAQSPDAEPLVDALAGNSV 768

Query: 445 ITSLDLAYNPIGADGA--KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           +TS  L++N  G D +   ALS  L  + +I  + L    I + G E++   L  N T++
Sbjct: 769 VTS--LSFNNTGFDDSLIAALSLALVDNESITHISLKGNNITSEGCEYLMGTLDSNTTLT 826

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            ++L   GL  E    L ++    N+ +TS+ L  N+I ++GA  + +AL+ N   ++T 
Sbjct: 827 KVELDGKGLSREDESALFEAL-ANNKYVTSLSLRKNKIDNEGAGELCEALRRNS--SLTH 883

Query: 563 LNLANNFLT 571
           +NL  N +T
Sbjct: 884 INLEENLIT 892



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 175/386 (45%), Gaps = 9/386 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   + +   N  D  L  L+ +L  N     +    N IT+ G +   G L+SN  +  
Sbjct: 538 AVERLSLRNSNVDDTELSSLSLALVDNTAVTHLWLGDNNITSEGAEYLIGTLESNNTIVY 597

Query: 223 LNLSGNP-IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN--SILRVL 279
           + L GN  I D+ V  +   LVDN  +  L L++  +  +GA++  + L+ N  S++ ++
Sbjct: 598 VELEGNRGIDDDIVSSISLALVDNKSITHLNLANNAITTDGAESTLQSLEANDPSLVDLM 657

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN-YGGALGANALAKGLEGNKSLRELHLH 338
             + +++       + +AL  N  + SL LN   +  +L A  L+  L  N+S+  + L 
Sbjct: 658 LDDVDLVQSPEAEPILDALAANKHVTSLSLNNTCFDDSLIA-TLSLALVDNRSITHISLR 716

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK-SLLWINLYMN 397
            N I  EG   LM  L S   K+  LD+  N      +      +     + +  +L  N
Sbjct: 717 DNKITSEGCEYLMGTLDSNT-KIIHLDLTGNPTDLAQSPDAEPLVDALAGNSVVTSLSFN 775

Query: 398 DIG--DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           + G  D     ++ AL  N +IT I L GNNI S+G   +   L  N+ +T ++L    +
Sbjct: 776 NTGFDDSLIAALSLALVDNESITHISLKGNNITSEGCEYLMGTLDSNTTLTKVELDGKGL 835

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
             +   AL E L  +  + +L L   +I   GA  + + LR N++++ ++L  N +    
Sbjct: 836 SREDESALFEALANNKYVTSLSLRKNKIDNEGAGELCEALRRNSSLTHINLEENLITSNA 895

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIR 541
           A       K  N+ +  ++LA N +R
Sbjct: 896 ALDFITCLKEHNDTVQYLELADNRVR 921



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 9/181 (4%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           L ++L  N     +SF   G   + I A    L  N ++  ++L GN I  EG + L   
Sbjct: 759 LVDALAGNSVVTSLSFNNTGFDDSLIAALSLALVDNESITHISLKGNNITSEGCEYLMGT 818

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  + +++L    L  E   A+ E L NN  +  L L  N ID  G   L EAL  N
Sbjct: 819 LDSNTTLTKVELDGKGLSREDESALFEALANNKYVTSLSLRKNKIDNEGAGELCEALRRN 878

Query: 302 STIRSLHLNGNYGGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           S++  ++L  N   +  A      L E N +++ L L  N +         SGL S+  K
Sbjct: 879 SSLTHINLEENLITSNAALDFITCLKEHNDTVQYLELADNRV--------RSGLFSQMNK 930

Query: 361 L 361
           +
Sbjct: 931 I 931



 Score = 43.1 bits (100), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 30/157 (19%)

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D+      D  +    +  + L  +N+     S+++  L DN+ +T L L  N       
Sbjct: 523 DQSTISTDDDWQAQAAVERLSLRNSNVDDTELSSLSLALVDNTAVTHLWLGDN------- 575

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN-GLRDEGAKCL 519
                                 I + GAE++   L  NNTI  ++L  N G+ D+    +
Sbjct: 576 ---------------------NITSEGAEYLIGTLESNNTIVYVELEGNRGIDDDIVSSI 614

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           + +  V N+++T ++LA N I  DGA +  Q+L+AN+
Sbjct: 615 SLAL-VDNKSITHLNLANNAITTDGAESTLQSLEAND 650


>gi|307691260|ref|NP_001182696.1| uncharacterized protein LOC627607 [Mus musculus]
          Length = 487

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 150/300 (50%), Gaps = 9/300 (3%)

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A   + N     ++LN +  G +G  A+A  L  N ++ +L L  N I +EGI +LM  L
Sbjct: 83  ASYFIRNMEESCVNLNHHGLGPMGTKAIAITLVSNTTVLKLELGDNCIQEEGIMSLMEML 142

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQ 413
                 L  L++ +N++  +GA  ++ +++   S LW + L  N   +E A  +  AL  
Sbjct: 143 HENY-YLQELNVSDNNLGLEGARIISNFLQENNSSLWKLKLSGNSFKEECAALLCQALSS 201

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N  I +++L  N     G   + ++L  N  + SL+L++N     GA AL   L+ +  +
Sbjct: 202 NYRIRSLNLSHNEFSDIGGEHLGQMLALNVGLQSLNLSWNHFNIRGAVALCNGLRSNVTL 261

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
             L +     G  GA  + D LR N+ +  +D+  NG+ +EGA  +++  +  NE L  +
Sbjct: 262 KKLDVSMNGFGNEGALALGDALRLNSCLVYVDVSRNGITNEGASKISKGLE-NNECLQVL 320

Query: 534 DLAFNEIRDDGAFAIAQALKAN-----EDVAVTSLNLANNFLTKF-GQSALTDAKDLVYE 587
            L  N +  +GA+++  A+K N     ED+ ++++ ++  F+    G  A+    D+VY+
Sbjct: 321 KLFLNPLSLEGAYSLIMAIKRNPKSRMEDIDISNVLVSEQFVKVLDGVCAIHPQLDVVYK 380



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 130/275 (47%), Gaps = 30/275 (10%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           V+   +G+   G KA    L SN  +  L L  N I +EG+  L ++L +N  ++ L +S
Sbjct: 95  VNLNHHGLGPMGTKAIAITLVSNTTVLKLELGDNCIQEEGIMSLMEMLHENYYLQELNVS 154

Query: 255 SVDLRDEGAKAIAELLK-NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
             +L  EGA+ I+  L+ NNS L  L+L+ N         L +AL  N  IRSL+L+ N 
Sbjct: 155 DNNLGLEGARIISNFLQENNSSLWKLKLSGNSFKEECAALLCQALSSNYRIRSLNLSHNE 214

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
              +G   L + L  N  L+ L+L  N     G  AL +GL S    L  LD+       
Sbjct: 215 FSDIGGEHLGQMLALNVGLQSLNLSWNHFNIRGAVALCNGLRSNV-TLKKLDVS------ 267

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
                                 MN  G+EGA  + DAL+ N  +  +D+  N I ++GAS
Sbjct: 268 ----------------------MNGFGNEGALALGDALRLNSCLVYVDVSRNGITNEGAS 305

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            I++ L++N  +  L L  NP+  +GA +L   +K
Sbjct: 306 KISKGLENNECLQVLKLFLNPLSLEGAYSLIMAIK 340



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 136/264 (51%), Gaps = 2/264 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S V+++    G  G   +A +L  N T  ++    N I   GI +   +L  N  L+ LN
Sbjct: 93  SCVNLNHHGLGPMGTKAIAITLVSNTTVLKLELGDNCIQEEGIMSLMEMLHENYYLQELN 152

Query: 225 LSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + + L + N+ + +L+LS    ++E A  + + L +N  +R L L++
Sbjct: 153 VSDNNLGLEGARIISNFLQENNSSLWKLKLSGNSFKEECAALLCQALSSNYRIRSLNLSH 212

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G   L + L  N  ++SL+L+ N+    GA AL  GL  N +L++L +  N  G
Sbjct: 213 NEFSDIGGEHLGQMLALNVGLQSLNLSWNHFNIRGAVALCNGLRSNVTLKKLDVSMNGFG 272

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           +EG  AL   L      L  +D+  N I+ +GA  +++ ++N + L  + L++N +  EG
Sbjct: 273 NEGALALGDAL-RLNSCLVYVDVSRNGITNEGASKISKGLENNECLQVLKLFLNPLSLEG 331

Query: 404 AEKIADALKQNRTITTIDLGGNNI 427
           A  +  A+K+N      D+  +N+
Sbjct: 332 AYSLIMAIKRNPKSRMEDIDISNV 355



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 131/252 (51%), Gaps = 7/252 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G + A+   + +E  +S   L+ HG  +G  G +A+   L S    L  L++G+N I  +
Sbjct: 79  GVVPASYFIRNME--ESCVNLNHHG--LGPMGTKAIAITLVSNTTVLK-LELGDNCIQEE 133

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
           G   + E +     L  +N+  N++G EGA  I++ L++N + +  + L GN+   + A+
Sbjct: 134 GIMSLMEMLHENYYLQELNVSDNNLGLEGARIISNFLQENNSSLWKLKLSGNSFKEECAA 193

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
            + + L  N  I SL+L++N     G + L ++L  +  + +L L W      GA  + +
Sbjct: 194 LLCQALSSNYRIRSLNLSHNEFSDIGGEHLGQMLALNVGLQSLNLSWNHFNIRGAVALCN 253

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            LR N T+  LD+  NG  +EGA  L  + + +N  L  +D++ N I ++GA  I++ L+
Sbjct: 254 GLRSNVTLKKLDVSMNGFGNEGALALGDALR-LNSCLVYVDVSRNGITNEGASKISKGLE 312

Query: 554 ANEDVAVTSLNL 565
            NE + V  L L
Sbjct: 313 NNECLQVLKLFL 324



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 29/207 (14%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +SG +F +E    L ++L  N     ++ + N  +  G +    +L  N+ L++LNLS N
Sbjct: 182 LSGNSFKEECAALLCQALSSNYRIRSLNLSHNEFSDIGGEHLGQMLALNVGLQSLNLSWN 241

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
                G   LC+ L  N  +++L +S     +EGA A+ + L+ NS L  ++++ N    
Sbjct: 242 HFNIRGAVALCNGLRSNVTLKKLDVSMNGFGNEGALALGDALRLNSCLVYVDVSRN---- 297

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G T+                        GA+ ++KGLE N+ L+ L L  N +  EG  
Sbjct: 298 -GITN-----------------------EGASKISKGLENNECLQVLKLFLNPLSLEGAY 333

Query: 349 ALMSGLS-SRKGKLAVLDIGNNSISAK 374
           +L+  +  + K ++  +DI N  +S +
Sbjct: 334 SLIMAIKRNPKSRMEDIDISNVLVSEQ 360


>gi|114635946|ref|XP_521822.2| PREDICTED: NACHT, LRR and PYD domains-containing protein 14 [Pan
           troglodytes]
          Length = 1093

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 154/319 (48%), Gaps = 6/319 (1%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L   L   N  ++ L L        G   ++ 
Sbjct: 665 LCSVLHTNEHLRELDLCHSNLDKSAMNILHHELRHPNCKLQKLLLKF-ITFPDGCQDIST 723

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  NK+L  L L G+ IGD G+++L   L   + KL  L + + +++     +++  + 
Sbjct: 724 SLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALI 783

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 784 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNK 843

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 844 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLT 903

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            LDL +N L+D G K L   F+  +  L  ++L    + +     +A  +  N ++   S
Sbjct: 904 HLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLR--S 961

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+L NN L   G   L DA
Sbjct: 962 LDLGNNDLQDDGVKILCDA 980



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 4/306 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD G+  L E+L + +   + +   +  +T          L  + +L  LNL
Sbjct: 734  LDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRSQSLIFLNL 793

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GV+ LC+ L      +ERL L S  L + G + ++  L +N  L  L L +N
Sbjct: 794  STNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRLTHLCLADN 853

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   +++AL     T++SL L   +  +L +  L+  L  NKSL  L L  N + 
Sbjct: 854  VLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHLDLGSNWLQ 913

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D G++ L          L  L++    ++      +A  I N  +L  ++L  ND+ D+G
Sbjct: 914  DNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQDDG 973

Query: 404  AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + DAL+  N  I  + L    + S     ++  L  N  +  ++L  N +G +G   
Sbjct: 974  VKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEGIVK 1033

Query: 463  LSEVLK 468
            L +VLK
Sbjct: 1034 LYKVLK 1039



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 149/340 (43%), Gaps = 16/340 (4%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      
Sbjct: 717  GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I+  L  +  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISNALIRSQSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  NK L  L L  N +GD G++ +   L   +  L  L +     ++  + +++  
Sbjct: 836  SLALISNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            + + KSL  ++L  N + D G + + D  +     +  ++L G  + +     +A V+ +
Sbjct: 896  LLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  + SLDL  N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  
Sbjct: 956  NPNLRSLDLGNNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKR 1015

Query: 501  ISILDLRANGLRDEG----------AKCLAQSFKVVNEAL 530
            +  ++L  N L  EG           KC  Q   +  EA 
Sbjct: 1016 LIKMNLTQNTLGYEGIVKLYKVLKSPKCKLQVLGLCKEAF 1055



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 169/363 (46%), Gaps = 7/363 (1%)

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLC-DILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             VL +N  L+ L+L  + +    +  L  ++   N  +++L L  +   D G + I+  L
Sbjct: 667  SVLHTNEHLRELDLCHSNLDKSAMNILHHELRHPNCKLQKLLLKFITFPD-GCQDISTSL 725

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN 329
             +N  L  L+L  + I  +G  SL EAL      +++L L            ++  L  +
Sbjct: 726  IHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRS 785

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL  L+L  N++ D+G++ L   L   K  L  L + +  ++  G  +++  + + K L
Sbjct: 786  QSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRL 845

Query: 390  LWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              + L  N +GD G + ++DAL+  + T+ ++ L   +  S  +  ++  L  N  +T L
Sbjct: 846  THLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHL 905

Query: 449  DLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            DL  N +  +G K L +V +    N+  L+L  C +  +    +A ++  N  +  LDL 
Sbjct: 906  DLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLG 965

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
             N L+D+G K L  + +  N  +  + L +  +       ++ AL  N+   +  +NL  
Sbjct: 966  NNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNK--RLIKMNLTQ 1023

Query: 568  NFL 570
            N L
Sbjct: 1024 NTL 1026


>gi|326431953|gb|EGD77523.1| serine/threonine protein kinase [Salpingoeca sp. ATCC 50818]
          Length = 1076

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 132/266 (49%), Gaps = 5/266 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K+++AF    +   + G EG   LA +L  +   + +    N I   G  A  G L+ + 
Sbjct: 58  KDIQAF----LDNNSIGKEGCVALAGALRGHTGLQRLVLNNNSIEKEGCVALAGALRGHT 113

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L+ L L+ N I  EG   L   L  + G++ L L++  +  EG  A+A  L+ ++ L+ 
Sbjct: 114 GLQWLGLTNNSIEKEGCVALAGALRGHTGLQELYLNNNSIEKEGCVALAGALRGHTGLQE 173

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L+NN I+  G  +LA AL  ++ ++ L L+ N     G  ALA  L G+  L+EL L+
Sbjct: 174 LYLSNNSIEKEGCVALAGALRGHTGLQELFLSNNSIEKEGCVALAGALRGHTGLQELFLN 233

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            NSI  EG  AL   L    G L  L + +NSI  +G   +A  ++    L  + L  N 
Sbjct: 234 NNSIEKEGCVALAGALRGHTG-LQELYLDDNSIEKEGCVALAGALRGHTGLYILGLSNNS 292

Query: 399 IGDEGAEKIADALKQNRTITTIDLGG 424
           I  EG   +A AL+++  + T+ L G
Sbjct: 293 IEKEGCVALAGALREHTRLQTLWLQG 318



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 156/335 (46%), Gaps = 6/335 (1%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDIL--VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           ++   +N +   +GD+G K L   L    N  ++   L +  +  EG  A+A  L+ ++ 
Sbjct: 28  MSTTNVNFNKAGLGDKGAKALAIALNIRPNKDIQAF-LDNNSIGKEGCVALAGALRGHTG 86

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+ L LNNN I+  G  +LA AL  ++ ++ L L  N     G  ALA  L G+  L+EL
Sbjct: 87  LQRLVLNNNSIEKEGCVALAGALRGHTGLQWLGLTNNSIEKEGCVALAGALRGHTGLQEL 146

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L+ NSI  EG  AL   L    G L  L + NNSI  +G   +A  ++    L  + L 
Sbjct: 147 YLNNNSIEKEGCVALAGALRGHTG-LQELYLSNNSIEKEGCVALAGALRGHTGLQELFLS 205

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N I  EG   +A AL+ +  +  + L  N+I  +G  A+A  L+ ++ +  L L  N I
Sbjct: 206 NNSIEKEGCVALAGALRGHTGLQELFLNNNSIEKEGCVALAGALRGHTGLQELYLDDNSI 265

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
             +G  AL+  L+ H  +  L L    I   G   +A  LR +  +  L L+  G+ D  
Sbjct: 266 EKEGCVALAGALRGHTGLYILGLSNNSIEKEGCVALAGALREHTRLQTLWLQ--GIGDAA 323

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           A+     +     A   +  +     D+G +  AQ
Sbjct: 324 ARAFGAKWPPEGSARLFLTTSERAAFDEGQWLQAQ 358



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 117/268 (43%), Gaps = 31/268 (11%)

Query: 342 IGDEGIRALMSGLSSRKGK----------------------------LAVLDIGNNSISA 373
           +GD+G +AL   L+ R  K                            L  L + NNSI  
Sbjct: 40  LGDKGAKALAIALNIRPNKDIQAFLDNNSIGKEGCVALAGALRGHTGLQRLVLNNNSIEK 99

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           +G   +A  ++    L W+ L  N I  EG   +A AL+ +  +  + L  N+I  +G  
Sbjct: 100 EGCVALAGALRGHTGLQWLGLTNNSIEKEGCVALAGALRGHTGLQELYLNNNSIEKEGCV 159

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           A+A  L+ ++ +  L L+ N I  +G  AL+  L+ H  +  L L    I   G   +A 
Sbjct: 160 ALAGALRGHTGLQELYLSNNSIEKEGCVALAGALRGHTGLQELFLSNNSIEKEGCVALAG 219

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            LR +  +  L L  N +  EG   LA + +  +  L  + L  N I  +G  A+A AL+
Sbjct: 220 ALRGHTGLQELFLNNNSIEKEGCVALAGALR-GHTGLQELYLDDNSIEKEGCVALAGALR 278

Query: 554 ANEDVAVTSLNLANNFLTKFGQSALTDA 581
            +  + +  L L+NN + K G  AL  A
Sbjct: 279 GHTGLYI--LGLSNNSIEKEGCVALAGA 304


>gi|119589074|gb|EAW68668.1| NACHT, leucine rich repeat and PYD containing 14, isoform CRA_c
           [Homo sapiens]
          Length = 1093

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 154/319 (48%), Gaps = 6/319 (1%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L   L   N  ++ L L        G   ++ 
Sbjct: 665 LCSVLHTNEHLRELDLYHSNLDKSAMNILHHELRHPNCKLQKLLLKF-ITFPDGCQDIST 723

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  NK+L  L L G+ IGD G+++L   L   + KL  L + + +++     +++  + 
Sbjct: 724 SLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALI 783

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 784 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNK 843

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 844 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLT 903

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            LDL +N L+D G K L   F+  +  L  ++L    + +     +A  +  N ++   S
Sbjct: 904 HLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLR--S 961

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+L NN L   G   L DA
Sbjct: 962 LDLGNNDLQDDGVKILCDA 980



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 4/306 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD G+  L E+L + +   + +   +  +T          L  + +L  LNL
Sbjct: 734  LDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRSQSLIFLNL 793

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GV+ LC+ L      +ERL L S  L + G + ++  L +N  L  L L +N
Sbjct: 794  STNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRLTHLCLADN 853

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   +++AL     T++SL L   +  +L +  L+  L  NKSL  L L  N + 
Sbjct: 854  VLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHLDLGSNWLQ 913

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D G++ L          L  L++    ++      +A  I N  +L  ++L  ND+ D+G
Sbjct: 914  DNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQDDG 973

Query: 404  AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + DAL+  N  I  + L    + S     ++  L  N  +  ++L  N +G +G   
Sbjct: 974  VKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEGIVK 1033

Query: 463  LSEVLK 468
            L +VLK
Sbjct: 1034 LYKVLK 1039



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 149/340 (43%), Gaps = 16/340 (4%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      
Sbjct: 717  GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I+  L  +  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISNALIRSQSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  NK L  L L  N +GD G++ +   L   +  L  L +     ++  + +++  
Sbjct: 836  SLALISNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            + + KSL  ++L  N + D G + + D  +     +  ++L G  + +     +A V+ +
Sbjct: 896  LLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  + SLDL  N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  
Sbjct: 956  NPNLRSLDLGNNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKR 1015

Query: 501  ISILDLRANGLRDEG----------AKCLAQSFKVVNEAL 530
            +  ++L  N L  EG           KC  Q   +  EA 
Sbjct: 1016 LIKMNLTQNTLGYEGIVKLYKVLKSPKCKLQVLGLCKEAF 1055



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 169/363 (46%), Gaps = 7/363 (1%)

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLC-DILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             VL +N  L+ L+L  + +    +  L  ++   N  +++L L  +   D G + I+  L
Sbjct: 667  SVLHTNEHLRELDLYHSNLDKSAMNILHHELRHPNCKLQKLLLKFITFPD-GCQDISTSL 725

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN 329
             +N  L  L+L  + I  +G  SL EAL      +++L L            ++  L  +
Sbjct: 726  IHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRS 785

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL  L+L  N++ D+G++ L   L   K  L  L + +  ++  G  +++  + + K L
Sbjct: 786  QSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRL 845

Query: 390  LWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              + L  N +GD G + ++DAL+  + T+ ++ L   +  S  +  ++  L  N  +T L
Sbjct: 846  THLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHL 905

Query: 449  DLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            DL  N +  +G K L +V +    N+  L+L  C +  +    +A ++  N  +  LDL 
Sbjct: 906  DLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLG 965

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
             N L+D+G K L  + +  N  +  + L +  +       ++ AL  N+   +  +NL  
Sbjct: 966  NNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNK--RLIKMNLTQ 1023

Query: 568  NFL 570
            N L
Sbjct: 1024 NTL 1026


>gi|397496667|ref|XP_003819153.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14 [Pan
           paniscus]
          Length = 1093

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 154/319 (48%), Gaps = 6/319 (1%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L   L   N  ++ L L        G   ++ 
Sbjct: 665 LCSVLHTNEHLRELDLCHSNLDKSAMNILHHELRHPNCKLQKLLLKF-ITFPDGCQDIST 723

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  NK+L  L L G+ IGD G+++L   L   + KL  L + + +++     +++  + 
Sbjct: 724 SLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALI 783

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 784 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNK 843

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 844 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLT 903

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            LDL +N L+D G K L   F+  +  L  ++L    + +     +A  +  N ++   S
Sbjct: 904 HLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLR--S 961

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+L NN L   G   L DA
Sbjct: 962 LDLGNNDLQDDGVKILCDA 980



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 4/306 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD G+  L E+L + +   + +   +  +T          L  + +L  LNL
Sbjct: 734  LDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRSQSLIFLNL 793

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GV+ LC+ L      +ERL L S  L + G + ++  L +N  L  L L +N
Sbjct: 794  STNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRLTHLCLADN 853

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   +++AL     T++SL L   +  +L +  L+  L  NKSL  L L  N + 
Sbjct: 854  VLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHLDLGSNWLQ 913

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D G++ L          L  L++    ++      +A  I N  +L  ++L  ND+ D+G
Sbjct: 914  DNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQDDG 973

Query: 404  AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + DAL+  N  I  + L    + S     ++  L  N  +  ++L  N +G +G   
Sbjct: 974  VKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALVCNKRLIKMNLTQNTLGYEGIVK 1033

Query: 463  LSEVLK 468
            L +VLK
Sbjct: 1034 LYKVLK 1039



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 149/340 (43%), Gaps = 16/340 (4%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      
Sbjct: 717  GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I+  L  +  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISNALIRSQSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  NK L  L L  N +GD G++ +   L   +  L  L +     ++  + +++  
Sbjct: 836  SLALISNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            + + KSL  ++L  N + D G + + D  +     +  ++L G  + +     +A V+ +
Sbjct: 896  LLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  + SLDL  N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  
Sbjct: 956  NPNLRSLDLGNNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALVCNKR 1015

Query: 501  ISILDLRANGLRDEG----------AKCLAQSFKVVNEAL 530
            +  ++L  N L  EG           KC  Q   +  EA 
Sbjct: 1016 LIKMNLTQNTLGYEGIVKLYKVLKSPKCKLQVLGLCKEAF 1055



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 169/363 (46%), Gaps = 7/363 (1%)

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLC-DILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             VL +N  L+ L+L  + +    +  L  ++   N  +++L L  +   D G + I+  L
Sbjct: 667  SVLHTNEHLRELDLCHSNLDKSAMNILHHELRHPNCKLQKLLLKFITFPD-GCQDISTSL 725

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN 329
             +N  L  L+L  + I  +G  SL EAL      +++L L            ++  L  +
Sbjct: 726  IHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRS 785

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL  L+L  N++ D+G++ L   L   K  L  L + +  ++  G  +++  + + K L
Sbjct: 786  QSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRL 845

Query: 390  LWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              + L  N +GD G + ++DAL+  + T+ ++ L   +  S  +  ++  L  N  +T L
Sbjct: 846  THLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHL 905

Query: 449  DLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            DL  N +  +G K L +V +    N+  L+L  C +  +    +A ++  N  +  LDL 
Sbjct: 906  DLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLG 965

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
             N L+D+G K L  + +  N  +  + L +  +       ++ AL  N+   +  +NL  
Sbjct: 966  NNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALVCNK--RLIKMNLTQ 1023

Query: 568  NFL 570
            N L
Sbjct: 1024 NTL 1026


>gi|290973418|ref|XP_002669445.1| predicted protein [Naegleria gruberi]
 gi|284082993|gb|EFC36701.1| predicted protein [Naegleria gruberi]
          Length = 280

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 126/227 (55%), Gaps = 31/227 (13%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           +L +LDIG N I  +GA  ++E     K L  +N+  N+IGDEGA  I++     + +T 
Sbjct: 3   QLTLLDIGYNQIGVEGAKLISEM----KQLTLLNIGTNEIGDEGAIMISEM----KQLTF 54

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +D+GGN I  +GA +I+++ +    +T LD+  N IG  GAK++SE+ +    +  L +G
Sbjct: 55  LDIGGNQISDEGARSISKMRQ----LTFLDIYGNGIGDKGAKSISEMQQ----LTLLNIG 106

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
             QIG  GA+ ++ M +    ++ LD+  N +  EGAKC+++      + LTS+++  NE
Sbjct: 107 GNQIGDEGAKLISQMKQ----LTFLDIYCNEIDVEGAKCISEM-----QQLTSLNIGSNE 157

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 586
           I  +G   +++  +      +TSLN+  N +   G   ++  K L +
Sbjct: 158 IGVEGVKFLSEMQQ------LTSLNIGENLIGDEGAKLISQMKQLTF 198



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 165/309 (53%), Gaps = 50/309 (16%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           EGAK I+E+ +    L +L +  N I   G   ++E       +  L + GN     GA 
Sbjct: 17  EGAKLISEMKQ----LTLLNIGTNEIGDEGAIMISEM----KQLTFLDIGGNQISDEGAR 68

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +++K     + L  L ++GN IGD+G +++     S   +L +L+IG N I  +GA    
Sbjct: 69  SISK----MRQLTFLDIYGNGIGDKGAKSI-----SEMQQLTLLNIGGNQIGDEGA---- 115

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + I   K L ++++Y N+I  EGA+ I++     + +T++++G N I  +G     + L 
Sbjct: 116 KLISQMKQLTFLDIYCNEIDVEGAKCISEM----QQLTSLNIGSNEIGVEGV----KFLS 167

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC-QIGASGAEFVADMLRYNN 499
           +   +TSL++  N IG +GAK +S++ +      T    +C +IG  GA+ +++M +   
Sbjct: 168 EMQQLTSLNIGENLIGDEGAKLISQMKQL-----TFLDIYCNEIGVEGAKSISEMQQ--- 219

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
            ++ L++  NG+ DEGAK +++      + LT +D+  NEI  +GA  I++  +      
Sbjct: 220 -LTSLNIGENGIGDEGAKLISEM-----KQLTFLDIYCNEIGVEGAKYISEMKQ------ 267

Query: 560 VTSLNLANN 568
           +TSLN++NN
Sbjct: 268 LTSLNISNN 276



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 145/310 (46%), Gaps = 71/310 (22%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF---AANGITAAGIKAFDGVLQS 216
           E++  + +++     GDEG   ++E        ++++F     N I+  G ++   + Q 
Sbjct: 24  EMKQLTLLNIGTNEIGDEGAIMISE-------MKQLTFLDIGGNQISDEGARSISKMRQ- 75

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              L  L++ GN IGD+G K + ++      +  L +    + DEGAK I+++ +    L
Sbjct: 76  ---LTFLDIYGNGIGDKGAKSISEM----QQLTLLNIGGNQIGDEGAKLISQMKQ----L 124

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L++  N ID  G   ++E                                 + L  L+
Sbjct: 125 TFLDIYCNEIDVEGAKCISEM--------------------------------QQLTSLN 152

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           +  N IG EG++ L     S   +L  L+IG N I  +GA    + I   K L ++++Y 
Sbjct: 153 IGSNEIGVEGVKFL-----SEMQQLTSLNIGENLIGDEGA----KLISQMKQLTFLDIYC 203

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N+IG EGA+ I++     + +T++++G N I  +GA  I+ + +    +T LD+  N IG
Sbjct: 204 NEIGVEGAKSISEM----QQLTSLNIGENGIGDEGAKLISEMKQ----LTFLDIYCNEIG 255

Query: 457 ADGAKALSEV 466
            +GAK +SE+
Sbjct: 256 VEGAKYISEM 265



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 35/188 (18%)

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
           + +T +D+G N I  +GA  I+ + +    +T L++  N IG +GA  +SE+ +    + 
Sbjct: 2   KQLTLLDIGYNQIGVEGAKLISEMKQ----LTLLNIGTNEIGDEGAIMISEMKQ----LT 53

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
            L +G  QI   GA  ++ M +    ++ LD+  NG+ D+GAK +++      + LT ++
Sbjct: 54  FLDIGGNQISDEGARSISKMRQ----LTFLDIYGNGIGDKGAKSISEM-----QQLTLLN 104

Query: 535 LAFNEIRDDGAFAIAQA-------LKANE-DV----------AVTSLNLANNFLTKFGQS 576
           +  N+I D+GA  I+Q        +  NE DV           +TSLN+ +N +   G  
Sbjct: 105 IGGNQIGDEGAKLISQMKQLTFLDIYCNEIDVEGAKCISEMQQLTSLNIGSNEIGVEGVK 164

Query: 577 ALTDAKDL 584
            L++ + L
Sbjct: 165 FLSEMQQL 172


>gi|399497952|emb|CCG20304.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSVPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEG   IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGVIAIANALKDSVPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSV 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 16/251 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALK 553
           +G  AIA ALK
Sbjct: 369 EGVIAIANALK 379


>gi|291234811|ref|XP_002737343.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 470

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 107/189 (56%), Gaps = 5/189 (2%)

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N  G EGA+ I+D L +N  + T+D+  NN+ S+G   I  ++ DN+ +TSL+++   I 
Sbjct: 86  NRFGTEGAKHISDMLTENVYLQTLDMSNNNLGSEGTRIICEMVADNNSLTSLNISGTQIK 145

Query: 457 ADGAKALSEVLK--FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
              A+ +S++L+      +  L L        G + +A  ++YN  + +++L  N +R +
Sbjct: 146 DTDAQVISDLLRDPLSARLKKLDLSHNHFEEPGGKHLALAIKYNKWLEVINLSYNHIRRK 205

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           GA  + ++ K+ N  LT +DL++N + D GA  I++ LKAN    +TSLN+A N  T FG
Sbjct: 206 GATSICKALKL-NSVLTDVDLSWNGLADPGAALISEVLKAN--TTLTSLNVAFNRFTIFG 262

Query: 575 QSALTDAKD 583
            + + D  D
Sbjct: 263 VTIVKDGLD 271



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 155/345 (44%), Gaps = 43/345 (12%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +  +L  N T  +   A N     G K    +L  N+ L+TL++S N +G EG + +C++
Sbjct: 68  MTTALVRNITVTDFILADNRFGTEGAKHISDMLTENVYLQTLDMSNNNLGSEGTRIICEM 127

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKN--NSILRVLELNNNMIDYSGFTSLAEALL 299
           + DN  +  L +S   ++D  A+ I++LL++  ++ L+ L+L++N  +  G   LA A+ 
Sbjct: 128 VADNNSLTSLNISGTQIKDTDAQVISDLLRDPLSARLKKLDLSHNHFEEPGGKHLALAIK 187

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
            N  +  ++L+ N+    GA ++ K L+ N  L ++ L  N + D               
Sbjct: 188 YNKWLEVINLSYNHIRRKGATSICKALKLNSVLTDVDLSWNGLAD--------------- 232

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
                          GA  ++E +K   +L  +N+  N     G   + D L +NRT+ T
Sbjct: 233 --------------PGAALISEVLKANTTLTSLNVAFNRFTIFGVTIVKDGLDENRTLKT 278

Query: 420 IDLGGNNIHSKGASAIARVL--KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           + +GGN I    +  +  VL  +    +T LDL   P+  +    L E+     ++  + 
Sbjct: 279 LRIGGNMITHAASMTLLTVLETRPECSLTLLDLGDAPVTREFTDLLEELQTERADLTVIY 338

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD----EGAKC 518
              C +   G +  A + R    I +  +R   LRD    EG +C
Sbjct: 339 --GCVV--RGFDIYAALARGRTHIPVNPIRV--LRDYIVNEGLRC 377



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 9/256 (3%)

Query: 288 YSGFTS-----LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           Y G TS     +  AL+ N T+    L  N  G  GA  ++  L  N  L+ L +  N++
Sbjct: 57  YCGLTSVDVKAMTTALVRNITVTDFILADNRFGTEGAKHISDMLTENVYLQTLDMSNNNL 116

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS--LLWINLYMNDIG 400
           G EG R ++  + +    L  L+I    I    A  +++ +++  S  L  ++L  N   
Sbjct: 117 GSEGTR-IICEMVADNNSLTSLNISGTQIKDTDAQVISDLLRDPLSARLKKLDLSHNHFE 175

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           + G + +A A+K N+ +  I+L  N+I  KGA++I + LK NSV+T +DL++N +   GA
Sbjct: 176 EPGGKHLALAIKYNKWLEVINLSYNHIRRKGATSICKALKLNSVLTDVDLSWNGLADPGA 235

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
             +SEVLK +  + +L + + +    G   V D L  N T+  L +  N +    +  L 
Sbjct: 236 ALISEVLKANTTLTSLNVAFNRFTIFGVTIVKDGLDENRTLKTLRIGGNMITHAASMTLL 295

Query: 521 QSFKVVNE-ALTSIDL 535
              +   E +LT +DL
Sbjct: 296 TVLETRPECSLTLLDL 311



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 8/257 (3%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+SVD+     KA+   L  N  +    L +N     G   +++ L EN  +++L ++ N
Sbjct: 60  LTSVDV-----KAMTTALVRNITVTDFILADNRFGTEGAKHISDMLTENVYLQTLDMSNN 114

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR-KGKLAVLDIGNNSI 371
             G+ G   + + +  N SL  L++ G  I D   + +   L      +L  LD+ +N  
Sbjct: 115 NLGSEGTRIICEMVADNNSLTSLNISGTQIKDTDAQVISDLLRDPLSARLKKLDLSHNHF 174

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
              G  H+A  IK  K L  INL  N I  +GA  I  ALK N  +T +DL  N +   G
Sbjct: 175 EEPGGKHLALAIKYNKWLEVINLSYNHIRRKGATSICKALKLNSVLTDVDLSWNGLADPG 234

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A+ I+ VLK N+ +TSL++A+N     G   + + L  +  + TL++G   I  + +  +
Sbjct: 235 AALISEVLKANTTLTSLNVAFNRFTIFGVTIVKDGLDENRTLKTLRIGGNMITHAASMTL 294

Query: 492 ADML--RYNNTISILDL 506
             +L  R   ++++LDL
Sbjct: 295 LTVLETRPECSLTLLDL 311



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 108/208 (51%), Gaps = 5/208 (2%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + +N    +GA H+++ +     L  +++  N++G EG   I + +  N ++T++++ G 
Sbjct: 83  LADNRFGTEGAKHISDMLTENVYLQTLDMSNNNLGSEGTRIICEMVADNNSLTSLNISGT 142

Query: 426 NIHSKGASAIARVLKD--NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            I    A  I+ +L+D  ++ +  LDL++N     G K L+  +K++  +  + L +  I
Sbjct: 143 QIKDTDAQVISDLLRDPLSARLKKLDLSHNHFEEPGGKHLALAIKYNKWLEVINLSYNHI 202

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
              GA  +   L+ N+ ++ +DL  NGL D GA  +++  K  N  LTS+++AFN     
Sbjct: 203 RRKGATSICKALKLNSVLTDVDLSWNGLADPGAALISEVLKA-NTTLTSLNVAFNRFTIF 261

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLT 571
           G   +   L  +E+  + +L +  N +T
Sbjct: 262 GVTIVKDGL--DENRTLKTLRIGGNMIT 287



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 113/227 (49%), Gaps = 3/227 (1%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  + +++   E     ++DMS  N G EG   + E +  N +   ++ +   I     +
Sbjct: 91  EGAKHISDMLTENVYLQTLDMSNNNLGSEGTRIICEMVADNNSLTSLNISGTQIKDTDAQ 150

Query: 209 AFDGVLQSNIA--LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
               +L+  ++  LK L+LS N   + G K L   +  N  +E + LS   +R +GA +I
Sbjct: 151 VISDLLRDPLSARLKKLDLSHNHFEEPGGKHLALAIKYNKWLEVINLSYNHIRRKGATSI 210

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
            + LK NS+L  ++L+ N +   G   ++E L  N+T+ SL++  N     G   +  GL
Sbjct: 211 CKALKLNSVLTDVDLSWNGLADPGAALISEVLKANTTLTSLNVAFNRFTIFGVTIVKDGL 270

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSR-KGKLAVLDIGNNSIS 372
           + N++L+ L + GN I       L++ L +R +  L +LD+G+  ++
Sbjct: 271 DENRTLKTLRIGGNMITHAASMTLLTVLETRPECSLTLLDLGDAPVT 317



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 3/206 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           ++   FG EG   +++ L  N   + +  + N + + G +    ++  N +L +LN+SG 
Sbjct: 83  LADNRFGTEGAKHISDMLTENVYLQTLDMSNNNLGSEGTRIICEMVADNNSLTSLNISGT 142

Query: 229 PIGDEGVKCLCDILVD--NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            I D   + + D+L D  +A +++L LS     + G K +A  +K N  L V+ L+ N I
Sbjct: 143 QIKDTDAQVISDLLRDPLSARLKKLDLSHNHFEEPGGKHLALAIKYNKWLEVINLSYNHI 202

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G TS+ +AL  NS +  + L+ N     GA  +++ L+ N +L  L++  N     G
Sbjct: 203 RRKGATSICKALKLNSVLTDVDLSWNGLADPGAALISEVLKANTTLTSLNVAFNRFTIFG 262

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSIS 372
           +  +  GL   +  L  L IG N I+
Sbjct: 263 VTIVKDGLDENR-TLKTLRIGGNMIT 287


>gi|348583944|ref|XP_003477732.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2-like [Cavia porcellus]
          Length = 1059

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 137/288 (47%), Gaps = 17/288 (5%)

Query: 283  NNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGNK 330
             +M    GF SL  +L E          +R L   HL   +   G     ALA  L   +
Sbjct: 750  KSMHAMPGFVSLIRSLYEMQEEQLAREAVRGLDIGHLKLTFCSVGPAECAALAFVLRHLQ 809

Query: 331  SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
                L L  NS+GD G+  L+  +    G    L + +N+IS +G   + E+  +   L 
Sbjct: 810  QPVALQLDHNSVGDIGVEQLLPCI----GICKALYLRDNNISDRGICKLIEHALHYGQLQ 865

Query: 391  WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
             + L+ N + D  A  +A  L+ N+    + LG N+I + GA  +A+ L+ N+ +  L  
Sbjct: 866  KLALFNNKLTDGCAHAMAKLLECNQNFLALRLGNNHITAAGAQVLAQGLRRNASLQFLGF 925

Query: 451  AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
              N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A ML  N  +  L L  N 
Sbjct: 926  WGNTVGDEGAQALAEALGDHQSLKWLSLVGNSIGSMGAQALAQMLEKNVALEELCLEENH 985

Query: 511  LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            L DEG   LA+  K  N +L  + L+ N +   G  A+ QAL++N  +
Sbjct: 986  LCDEGVCSLAEGLK-RNSSLKVLKLSNNSVTSRGVEALLQALESNNTI 1032



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 29/259 (11%)

Query: 256  VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            +D    G   + +LL    I + L L +N I   G   L E  L    ++ L L  N   
Sbjct: 816  LDHNSVGDIGVEQLLPCIGICKALYLRDNNISDRGICKLIEHALHYGQLQKLALFNNKLT 875

Query: 316  ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
               A+A+AK LE N++   L L                             GNN I+A G
Sbjct: 876  DGCAHAMAKLLECNQNFLALRL-----------------------------GNNHITAAG 906

Query: 376  AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
            A  +A+ ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GN+I S GA A+
Sbjct: 907  AQVLAQGLRRNASLQFLGFWGNTVGDEGAQALAEALGDHQSLKWLSLVGNSIGSMGAQAL 966

Query: 436  ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
            A++L+ N  +  L L  N +  +G  +L+E LK + ++  LKL    + + G E +   L
Sbjct: 967  AQMLEKNVALEELCLEENHLCDEGVCSLAEGLKRNSSLKVLKLSNNSVTSRGVEALLQAL 1026

Query: 496  RYNNTISILDLRANGLRDE 514
              NNTI  + LR N    E
Sbjct: 1027 ESNNTILEVWLRGNTFSSE 1045



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 133/271 (49%), Gaps = 8/271 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER-LQ 252
            +++F + G       AF  VL+       L L  N +GD GV    + L+   G+ + L 
Sbjct: 787  KLTFCSVGPAECAALAF--VLRHLQQPVALQLDHNSVGDIGV----EQLLPCIGICKALY 840

Query: 253  LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L   ++ D G   + E   +   L+ L L NN +      ++A+ L  N    +L L  N
Sbjct: 841  LRDNNISDRGICKLIEHALHYGQLQKLALFNNKLTDGCAHAMAKLLECNQNFLALRLGNN 900

Query: 313  YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
            +  A GA  LA+GL  N SL+ L   GN++GDEG +AL   L   +  L  L +  NSI 
Sbjct: 901  HITAAGAQVLAQGLRRNASLQFLGFWGNTVGDEGAQALAEALGDHQS-LKWLSLVGNSIG 959

Query: 373  AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
            + GA  +A+ ++   +L  + L  N + DEG   +A+ LK+N ++  + L  N++ S+G 
Sbjct: 960  SMGAQALAQMLEKNVALEELCLEENHLCDEGVCSLAEGLKRNSSLKVLKLSNNSVTSRGV 1019

Query: 433  SAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
             A+ + L+ N+ I  + L  N   ++  + L
Sbjct: 1020 EALLQALESNNTILEVWLRGNTFSSEEIEKL 1050



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L  NQ    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 882  MAKLLECNQNFLALRLGNNHITAAGAQVLAQGLRRNASLQFLGFWGNTVGDEGAQALAEA 941

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  ++ L L    +   GA+A+A++L+ N  L  L L  N +   G  SLAE L  N
Sbjct: 942  LGDHQSLKWLSLVGNSIGSMGAQALAQMLEKNVALEELCLEENHLCDEGVCSLAEGLKRN 1001

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N   + G  AL + LE N ++ E+ L GN+   E I  L
Sbjct: 1002 SSLKVLKLSNNSVTSRGVEALLQALESNNTILEVWLRGNTFSSEEIEKL 1050



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 31/236 (13%)

Query: 173  NFGDEGLFFLAE-SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
            N  D G+  L E +L Y Q  ++++   N +T     A   +L+ N     L L  N I 
Sbjct: 845  NISDRGICKLIEHALHYGQL-QKLALFNNKLTDGCAHAMAKLLECNQNFLALRLGNNHIT 903

Query: 232  DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
              G + L   L  NA ++ L      + DEGA+A+A                        
Sbjct: 904  AAGAQVLAQGLRRNASLQFLGFWGNTVGDEGAQALA------------------------ 939

Query: 292  TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
                EAL ++ +++ L L GN  G++GA ALA+ LE N +L EL L  N + DEG+ +L 
Sbjct: 940  ----EALGDHQSLKWLSLVGNSIGSMGAQALAQMLEKNVALEELCLEENHLCDEGVCSLA 995

Query: 352  SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
             GL  R   L VL + NNS++++G   + + +++  ++L + L  N    E  EK+
Sbjct: 996  EGL-KRNSSLKVLKLSNNSVTSRGVEALLQALESNNTILEVWLRGNTFSSEEIEKL 1050


>gi|332214709|ref|XP_003256478.1| PREDICTED: leucine-rich repeat-containing protein 34 isoform 2
           [Nomascus leucogenys]
          Length = 432

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 27/219 (12%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+G N +   GA++  + ++   +L+++NL  NDIG EG E IA  L +NRT+  + + 
Sbjct: 128 LDVGYNLLCDVGAYYAMKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMT 187

Query: 424 GNNIHSKG---------------------------ASAIARVLKDNSVITSLDLAYNPIG 456
           GN I +KG                              + R+LK+N  + +L +  + I 
Sbjct: 188 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLEESTVHVGRMLKENHCLVALHMCKHDIK 247

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G + L + L  + ++  L +   +I   G  ++AD+L+ N T+ ++DL  N + + GA
Sbjct: 248 NSGIQQLCDALYLNNSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGA 307

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             L+++    N +L ++ +  N I  +G  A++Q++K N
Sbjct: 308 NYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTN 346



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 3/268 (1%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +T         +L++ + +  L++  N + D G      +L     +  L L   D+  E
Sbjct: 107 VTGEDFWILSKILKNCLYINGLDVGYNLLCDVGAYYAMKLLQKQLNLIYLNLMFNDIGPE 166

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G + IA++L  N  L+ L +  N I+  G    A  L  NS++  L L G+         
Sbjct: 167 GGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDL-GDCDLEESTVH 225

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           + + L+ N  L  LH+  + I + GI+ L   L      L  LD+  N I+  G  ++A+
Sbjct: 226 VGRMLKENHCLVALHMCKHDIKNSGIQQLCDALY-LNNSLRYLDVSCNKITHDGMVYLAD 284

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLK 440
            +K+  +L  I+L  N I + GA  +++ L   NR++  + +  NNI  +G  A+++ +K
Sbjct: 285 VLKSNTTLEVIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMK 344

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLK 468
            N   + + +  N        A S +++
Sbjct: 345 TNLTFSHIYIWGNKFDEATCVAYSHLIQ 372



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 124/262 (47%), Gaps = 7/262 (2%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +LQ  + L  LNL  N IG EG + +  +L  N  ++ L+++   + ++G    A +L+ 
Sbjct: 146 LLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQI 205

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           NS L  L+L +  ++ S    +   L EN  + +LH+  +     G   L   L  N SL
Sbjct: 206 NSSLEKLDLGDCDLEEST-VHVGRMLKENHCLVALHMCKHDIKNSGIQQLCDALYLNNSL 264

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI-KNCKSLLW 391
           R L +  N I  +G+  L   L S    L V+D+  N I   GA +++E +  + +SL  
Sbjct: 265 RYLDVSCNKITHDGMVYLADVLKSNT-TLEVIDLSFNRIENAGANYLSETLTSHNRSLKA 323

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +++  N+I  EG   ++ ++K N T + I + GN        A + +++    +   +  
Sbjct: 324 LSVVSNNIEGEGLVALSQSMKTNLTFSHIYIWGNKFDEATCVAYSHLIQ-TGCLKPDNTD 382

Query: 452 YNPIGADGAKALSEV---LKFH 470
             P   DG   L+EV   LK H
Sbjct: 383 VEPFVVDGRVYLAEVSNGLKKH 404



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 1/231 (0%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L++  K     + +D+      D G ++  + L        ++   N I   G +    V
Sbjct: 115 LSKILKNCLYINGLDVGYNLLCDVGAYYAMKLLQKQLNLIYLNLMFNDIGPEGGELIAKV 174

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  LK L ++GN I ++G      +L  N+ +E+L L   DL +E    +  +LK N
Sbjct: 175 LHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDL-EESTVHVGRMLKEN 233

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L +  + I  SG   L +AL  N+++R L ++ N     G   LA  L+ N +L 
Sbjct: 234 HCLVALHMCKHDIKNSGIQQLCDALYLNNSLRYLDVSCNKITHDGMVYLADVLKSNTTLE 293

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            + L  N I + G   L   L+S    L  L + +N+I  +G   +++ +K
Sbjct: 294 VIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMK 344



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 92/184 (50%), Gaps = 2/184 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R    + M+G    ++G  F A  L  N + E++      +  + +     +L+ N  L 
Sbjct: 179 RTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLEESTVHV-GRMLKENHCLV 237

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L++  + I + G++ LCD L  N  +  L +S   +  +G   +A++LK+N+ L V++L
Sbjct: 238 ALHMCKHDIKNSGIQQLCDALYLNNSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDL 297

Query: 282 NNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           + N I+ +G   L+E L   N ++++L +  N     G  AL++ ++ N +   +++ GN
Sbjct: 298 SFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTNLTFSHIYIWGN 357

Query: 341 SIGD 344
              +
Sbjct: 358 KFDE 361



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 11/170 (6%)

Query: 419 TIDLGGNN-------IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           T+++ GNN       +  +    ++++LK+   I  LD+ YN +   GA    ++L+   
Sbjct: 92  TLNIAGNNRLVPVERVTGEDFWILSKILKNCLYINGLDVGYNLLCDVGAYYAMKLLQKQL 151

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALT 531
           N+  L L +  IG  G E +A +L  N T+  L +  N + ++G    A   + +N +L 
Sbjct: 152 NLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQ-INSSLE 210

Query: 532 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            +DL   ++ ++    + + LK N    + +L++  + +   G   L DA
Sbjct: 211 KLDLGDCDL-EESTVHVGRMLKENH--CLVALHMCKHDIKNSGIQQLCDA 257


>gi|320165883|gb|EFW42782.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 642

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 110/215 (51%), Gaps = 31/215 (14%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL--- 448
           + L  + +G   A+ IA+ALK N T+T + L  N I   GA A+A  LK N+ +T L   
Sbjct: 25  LTLKASQLGSAEAQAIAEALKVNTTLTQLHLMDNQIGDIGAQAMAEALKVNTKVTQLYRG 84

Query: 449 -----------DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
                       L  N IG  GA+A++E LK +  +N L LG   IG  GA+ +A+ L+ 
Sbjct: 85  HAERSLNEGTDSLGTNQIGHGGAQAIAEALKVNTTLNDLDLGENMIGDIGAQAMAEALKV 144

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID--------------LAFNEIRDD 543
           N T+  LDL  N + D GA  + ++ K  N  +T ID              L  N+I D 
Sbjct: 145 NTTLDYLDLSVNQIGDTGATAIVEALK-ANTTVTLIDKGHYECSLMEEMDSLHENQIGDA 203

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           GA AIA+A+K N    +T L +  NFLT+ G ++L
Sbjct: 204 GAQAIAEAVKVNN--TLTMLYMDQNFLTEAGITSL 236



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 119/254 (46%), Gaps = 31/254 (12%)

Query: 285 MIDYSGFTSLAEALLENSTIRS--LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           M+ Y   T     L +     S  L L  +  G+  A A+A+ L+ N +L +LHL  N I
Sbjct: 1   MLSYQDMTESERELYDKVKNASGELTLKASQLGSAEAQAIAEALKVNTTLTQLHLMDNQI 60

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G +A+   L             N  ++     H    +         +L  N IG  
Sbjct: 61  GDIGAQAMAEALKV-----------NTKVTQLYRGHAERSLNEGTD----SLGTNQIGHG 105

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA+ IA+ALK N T+  +DLG N I   GA A+A  LK N+ +  LDL+ N IG  GA A
Sbjct: 106 GAQAIAEALKVNTTLNDLDLGENMIGDIGAQAMAEALKVNTTLDYLDLSVNQIGDTGATA 165

Query: 463 LSEVLKFHGNINTLKLGW--C------------QIGASGAEFVADMLRYNNTISILDLRA 508
           + E LK +  +  +  G   C            QIG +GA+ +A+ ++ NNT+++L +  
Sbjct: 166 IVEALKANTTVTLIDKGHYECSLMEEMDSLHENQIGDAGAQAIAEAVKVNNTLTMLYMDQ 225

Query: 509 NGLRDEGAKCLAQS 522
           N L + G   L Q+
Sbjct: 226 NFLTEAGITSLRQT 239



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 29/242 (11%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E++  A+ + +A  +A    L+ N  L  L+L  N IGD G + + + L  N  V +L  
Sbjct: 24  ELTLKASQLGSAEAQAIAEALKVNTTLTQLHLMDNQIGDIGAQAMAEALKVNTKVTQL-- 81

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
                R    +++ E   +        L  N I + G  ++AEAL  N+T+  L L  N 
Sbjct: 82  ----YRGHAERSLNEGTDS--------LGTNQIGHGGAQAIAEALKVNTTLNDLDLGENM 129

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G +GA A+A+ L+ N +L  L L  N IGD G  A++  L +    + ++D G+   S 
Sbjct: 130 IGDIGAQAMAEALKVNTTLDYLDLSVNQIGDTGATAIVEALKANT-TVTLIDKGHYECS- 187

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
                + E +         +L+ N IGD GA+ IA+A+K N T+T + +  N +   G +
Sbjct: 188 -----LMEEMD--------SLHENQIGDAGAQAIAEAVKVNNTLTMLYMDQNFLTEAGIT 234

Query: 434 AI 435
           ++
Sbjct: 235 SL 236



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 33/234 (14%)

Query: 150 SKQTLNEFAKEL-----RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           S Q + E  +EL      A   + +     G      +AE+L  N T  ++    N I  
Sbjct: 3   SYQDMTESERELYDKVKNASGELTLKASQLGSAEAQAIAEALKVNTTLTQLHLMDNQIGD 62

Query: 205 AGIKAFDGVLQSNI---------ALKTLN-----LSGNPIGDEGVKCLCDILVDNAGVER 250
            G +A    L+ N          A ++LN     L  N IG  G + + + L  N  +  
Sbjct: 63  IGAQAMAEALKVNTKVTQLYRGHAERSLNEGTDSLGTNQIGHGGAQAIAEALKVNTTLND 122

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH-- 308
           L L    + D GA+A+AE LK N+ L  L+L+ N I  +G T++ EAL  N+T+  +   
Sbjct: 123 LDLGENMIGDIGAQAMAEALKVNTTLDYLDLSVNQIGDTGATAIVEALKANTTVTLIDKG 182

Query: 309 ------------LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
                       L+ N  G  GA A+A+ ++ N +L  L++  N + + GI +L
Sbjct: 183 HYECSLMEEMDSLHENQIGDAGAQAIAEAVKVNNTLTMLYMDQNFLTEAGITSL 236



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 25/166 (15%)

Query: 145 KLFR-ESKQTLNEFAKELRAFSSVDMSGRN-FGDEGLFFLAESLGYNQTAEEVSFAANGI 202
           +L+R  ++++LNE           D  G N  G  G   +AE+L  N T  ++    N I
Sbjct: 80  QLYRGHAERSLNE---------GTDSLGTNQIGHGGAQAIAEALKVNTTLNDLDLGENMI 130

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-------------- 248
              G +A    L+ N  L  L+LS N IGD G   + + L  N  V              
Sbjct: 131 GDIGAQAMAEALKVNTTLDYLDLSVNQIGDTGATAIVEALKANTTVTLIDKGHYECSLME 190

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
           E   L    + D GA+AIAE +K N+ L +L ++ N +  +G TSL
Sbjct: 191 EMDSLHENQIGDAGAQAIAEAVKVNNTLTMLYMDQNFLTEAGITSL 236


>gi|344270472|ref|XP_003407068.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Loxodonta africana]
          Length = 953

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 134/267 (50%), Gaps = 7/267 (2%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            +AL+  L   +    L L  N++ D G++ L    S    +L ++ +  N I+ +G   
Sbjct: 692 CSALSFVLHHFRKRLALSLDNNNLNDYGVQELQPCFS----RLTIIRLSVNQITDRGVKV 747

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           + E +   K + ++ LY N I D GA+ +A  L++ +++  + LG   I S G   +A  
Sbjct: 748 LYEELTKYKIVTFLGLYNNQITDVGAKYVARILEECKSLAYLKLGLIIIASDGGICLALA 807

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           +K++  I  + +  N +G +GAKA +E L+ H ++ +L L +  I   G + +A  L+ N
Sbjct: 808 VKNSKSICDVGMWGNTVGDEGAKAFAEALRNHPSLTSLSLAFNGISTEGGKSLARALQQN 867

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++ IL L  N L DE A+ LA+  K+ N+ L  + L  N+I   G   +A AL+  E+ 
Sbjct: 868 TSLRILWLTKNELNDEVAESLAEMLKI-NQTLQHLWLIQNQITAKGVAHLADALQ--ENT 924

Query: 559 AVTSLNLANNFLTKFGQSALTDAKDLV 585
            +T + L  N +         D K ++
Sbjct: 925 GITEICLNGNLIKPEEAKVFEDEKRII 951



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 126/245 (51%), Gaps = 5/245 (2%)

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           NNN+ DY G   L       + IR   L+ N     G   L + L   K +  L L+ N 
Sbjct: 712 NNNLNDY-GVQELQPCFSRLTIIR---LSVNQITDRGVKVLYEELTKYKIVTFLGLYNNQ 767

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I D G + +   L   K  LA L +G   I++ G   +A  +KN KS+  + ++ N +GD
Sbjct: 768 ITDVGAKYVARILEECKS-LAYLKLGLIIIASDGGICLALAVKNSKSICDVGMWGNTVGD 826

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGA+  A+AL+ + ++T++ L  N I ++G  ++AR L+ N+ +  L L  N +  + A+
Sbjct: 827 EGAKAFAEALRNHPSLTSLSLAFNGISTEGGKSLARALQQNTSLRILWLTKNELNDEVAE 886

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
           +L+E+LK +  +  L L   QI A G   +AD L+ N  I+ + L  N ++ E AK    
Sbjct: 887 SLAEMLKINQTLQHLWLIQNQITAKGVAHLADALQENTGITEICLNGNLIKPEEAKVFED 946

Query: 522 SFKVV 526
             +++
Sbjct: 947 EKRII 951



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 112/229 (48%), Gaps = 5/229 (2%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK L + L     V  L L +  + D GAK +A +L+    L  L
Sbjct: 730 LTIIRLSVNQITDRGVKVLYEELTKYKIVTFLGLYNNQITDVGAKYVARILEECKSLAYL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L   +I   G   LA A+  + +I  + + GN  G  GA A A+ L  + SL  L L  
Sbjct: 790 KLGLIIIASDGGICLALAVKNSKSICDVGMWGNTVGDEGAKAFAEALRNHPSLTSLSLAF 849

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  EG ++L   L  +   L +L +  N ++ + A  +AE +K  ++L  + L  N I
Sbjct: 850 NGISTEGGKSLARAL-QQNTSLRILWLTKNELNDEVAESLAEMLKINQTLQHLWLIQNQI 908

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             +G   +ADAL++N  IT I L GN I  +     A+V +D   I  L
Sbjct: 909 TAKGVAHLADALQENTGITEICLNGNLIKPEE----AKVFEDEKRIICL 953



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 17/239 (7%)

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL------ 389
            +HG       +R +    S + GKLA   I  N +  K  F  A Y  +C +L      
Sbjct: 645 QVHGMPTFIWMLRCIYETQSEKVGKLAARGICANYL--KLTFCNA-YSADCSALSFVLHH 701

Query: 390 ----LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
               L ++L  N++ D G +++     +   +T I L  N I  +G   +   L    ++
Sbjct: 702 FRKRLALSLDNNNLNDYGVQELQPCFSR---LTIIRLSVNQITDRGVKVLYEELTKYKIV 758

Query: 446 TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
           T L L  N I   GAK ++ +L+   ++  LKLG   I + G   +A  ++ + +I  + 
Sbjct: 759 TFLGLYNNQITDVGAKYVARILEECKSLAYLKLGLIIIASDGGICLALAVKNSKSICDVG 818

Query: 506 LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           +  N + DEGAK  A++ +  + +LTS+ LAFN I  +G  ++A+AL+ N  + +  L 
Sbjct: 819 MWGNTVGDEGAKAFAEALRN-HPSLTSLSLAFNGISTEGGKSLARALQQNTSLRILWLT 876



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 73/131 (55%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           LA ++  +++  +V    N +   G KAF   L+++ +L +L+L+ N I  EG K L   
Sbjct: 804 LALAVKNSKSICDVGMWGNTVGDEGAKAFAEALRNHPSLTSLSLAFNGISTEGGKSLARA 863

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  +  L L+  +L DE A+++AE+LK N  L+ L L  N I   G   LA+AL EN
Sbjct: 864 LQQNTSLRILWLTKNELNDEVAESLAEMLKINQTLQHLWLIQNQITAKGVAHLADALQEN 923

Query: 302 STIRSLHLNGN 312
           + I  + LNGN
Sbjct: 924 TGITEICLNGN 934



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 92/202 (45%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G K    +L+   +L  L L 
Sbjct: 733 IRLSVNQITDRGVKVLYEELTKYKIVTFLGLYNNQITDVGAKYVARILEECKSLAYLKLG 792

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
              I  +G  CL   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 793 LIIIASDGGICLALAVKNSKSICDVGMWGNTVGDEGAKAFAEALRNHPSLTSLSLAFNGI 852

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA AL +N+++R L L  N      A +LA+ L+ N++L+ L L  N I  +G
Sbjct: 853 STEGGKSLARALQQNTSLRILWLTKNELNDEVAESLAEMLKINQTLQHLWLIQNQITAKG 912

Query: 347 IRALMSGLSSRKGKLAVLDIGN 368
           +  L   L    G   +   GN
Sbjct: 913 VAHLADALQENTGITEICLNGN 934


>gi|296209319|ref|XP_002751479.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Callithrix jacchus]
          Length = 957

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 111/200 (55%), Gaps = 1/200 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   K  L  L +G N I+++G  
Sbjct: 748 GVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKS-LTHLKLGKNKITSEGGK 806

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N +GDEGA+  A+AL+ + ++TT+ L  N + ++G  ++AR
Sbjct: 807 CLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLAR 866

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 867 ALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 926

Query: 498 NNTISILDLRANGLRDEGAK 517
           N  I+ + L  N ++ E AK
Sbjct: 927 NTGITEICLNGNLIKPEEAK 946



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 116/224 (51%), Gaps = 8/224 (3%)

Query: 343 GDEGIRALMSGLS--SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           G + +R   S L+  S   +L+V     N I+  G   ++E +   K + ++ LY N I 
Sbjct: 719 GVQELRPCFSRLTVISEAARLSV-----NQITDGGVKVLSEELTKYKIVTFLGLYNNQIT 773

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D GA  I   L + +++T + LG N I S+G   +A  +K++  I+ + +  N +G +GA
Sbjct: 774 DVGARYITKILDECKSLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGA 833

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
           KA +E L+ H ++ TL L    +   G + +A  L+ N ++ IL L  N L DE A+ LA
Sbjct: 834 KAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLA 893

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           +  KV N+ L  + L  N+I   G   +A AL+ N  +    LN
Sbjct: 894 EMLKV-NQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLN 936



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 103/188 (54%), Gaps = 3/188 (1%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L +N I D G + +++ L + + +T + L  N I   GA  I ++L +   +T L L  N
Sbjct: 739 LSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHLKLGKN 798

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            I ++G K L+  +K   +I+ + +   Q+G  GA+  A+ LR + +++ L L +NG+  
Sbjct: 799 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 858

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
           EG K LA++ +  N +L  + L  NE+ D+ A ++A+ LK N+   +  L L  N +T  
Sbjct: 859 EGGKSLARALQQ-NTSLEILWLTQNELNDEVAESLAEMLKVNQ--TLKHLWLIQNQITAK 915

Query: 574 GQSALTDA 581
           G + L DA
Sbjct: 916 GTAQLADA 923



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 93/200 (46%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S     D G+  L+E L   +    +    N IT  G +    +L    +L  L L  N
Sbjct: 739 LSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHLKLGKN 798

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L +N +  
Sbjct: 799 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 858

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+ L L  N I  +G  
Sbjct: 859 EGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTA 918

Query: 349 ALMSGLSSRKGKLAVLDIGN 368
            L   L +  G   +   GN
Sbjct: 919 QLADALQNNTGITEICLNGN 938



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 3/192 (1%)

Query: 157 FAKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            ++EL  +  V   G       D G  ++ + L   ++   +    N IT+ G K     
Sbjct: 752 LSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHLKLGKNKITSEGGKCLALA 811

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+ N
Sbjct: 812 VKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQQN 871

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  + 
Sbjct: 872 TSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGIT 931

Query: 334 ELHLHGNSIGDE 345
           E+ L+GN I  E
Sbjct: 932 EICLNGNLIKPE 943



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 102/241 (42%), Gaps = 29/241 (12%)

Query: 192 AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
           +E    + N IT  G+K     L     +  L L  N I D G + +  IL +   +  L
Sbjct: 734 SEAARLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHL 793

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           +L    +  EG K +A  +KN+  +  + +  N +   G  + AEAL  + ++ +L L  
Sbjct: 794 KLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLAS 853

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N     G  +LA+ L+ N SL  L L  N + DE   +L                     
Sbjct: 854 NGVSTEGGKSLARALQQNTSLEILWLTQNELNDEVAESL--------------------- 892

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
                   AE +K  ++L  + L  N I  +G  ++ADAL+ N  IT I L GN I  + 
Sbjct: 893 --------AEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGNLIKPEE 944

Query: 432 A 432
           A
Sbjct: 945 A 945



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++ S V M G   GDEG    AE+L  + +   +S A+NG++ 
Sbjct: 799 KITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVST 858

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 859 EGGKSLARALQQNTSLEILWLTQN----------------------------ELNDEVAE 890

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 891 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 938


>gi|281205123|gb|EFA79316.1| Prostaglandin-E [Polysphondylium pallidum PN500]
          Length = 1633

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 146/280 (52%), Gaps = 23/280 (8%)

Query: 175  GDEGLFFLAESLGYNQTAEEVSF--AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            G++G + +A  + YN+ ++  ++  A N     GI      L+++  +K L L  NP+  
Sbjct: 1296 GNQGGWEIANYIKYNKDSKIDTWYIAGNEFDVEGITPIAEALETDNKVKALWLKRNPLLT 1355

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L  +L  N+ ++ L + +  + DEG + +   L++NS LR L ++ N +     T
Sbjct: 1356 AGCRPLAAMLEKNSYLQILDVLNCGILDEGVEILFGALQHNSTLRHLYIDTNGLTPKSAT 1415

Query: 293  SLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
            ++ + L    + + +++++ N+ G  GA+ LA GL G+K+L  L L  N IG  G + L+
Sbjct: 1416 TVRKHLETGLNKLETIYMSCNHLGDAGASELAAGLLGDKTLLRLGLSSNCIGPAGTKELV 1475

Query: 352  SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI-GDEGAEKIADA 410
              +  +   L  L++G      +G F +                +N+I GDEGA +IA  
Sbjct: 1476 DAVI-KHPSLLELNLG----FKRGTFLLGS--------------LNNILGDEGANEIARL 1516

Query: 411  LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++ N  I +IDL  N+I  KG SA+   LK N+++TS+DL
Sbjct: 1517 IRANTQIRSIDLTHNSISQKGISALREALKTNNILTSMDL 1556



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 137/298 (45%), Gaps = 43/298 (14%)

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN--SILRVLE 280
            L+L    +G EG+K L   +  ++ ++RL L +  + ++G   IA  +K N  S +    
Sbjct: 1260 LDLCKQVVGPEGIKPLLGAMAKSSSIKRLLLGNNIVGNQGGWEIANYIKYNKDSKIDTWY 1319

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            +  N  D  G T +AEAL  ++ +++L L  N     G   LA  LE N  L+ L +   
Sbjct: 1320 IAGNEFDVEGITPIAEALETDNKVKALWLKRNPLLTAGCRPLAAMLEKNSYLQILDVLNC 1379

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-----------NC--- 386
             I DEG+  L   L      L  L I  N ++ K A  V ++++           +C   
Sbjct: 1380 GILDEGVEILFGALQ-HNSTLRHLYIDTNGLTPKSATTVRKHLETGLNKLETIYMSCNHL 1438

Query: 387  ---------------KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG-------- 423
                           K+LL + L  N IG  G +++ DA+ ++ ++  ++LG        
Sbjct: 1439 GDAGASELAAGLLGDKTLLRLGLSSNCIGPAGTKELVDAVIKHPSLLELNLGFKRGTFLL 1498

Query: 424  ---GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
                N +  +GA+ IAR+++ N+ I S+DL +N I   G  AL E LK +  + ++ L
Sbjct: 1499 GSLNNILGDEGANEIARLIRANTQIRSIDLTHNSISQKGISALREALKTNNILTSMDL 1556



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 117/263 (44%), Gaps = 31/263 (11%)

Query: 335  LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
            L L    +G EGI+ L+ G  ++   +  L +GNN +  +G + +A YIK  K       
Sbjct: 1260 LDLCKQVVGPEGIKPLL-GAMAKSSSIKRLLLGNNIVGNQGGWEIANYIKYNK------- 1311

Query: 395  YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
                               +  I T  + GN    +G + IA  L+ ++ + +L L  NP
Sbjct: 1312 -------------------DSKIDTWYIAGNEFDVEGITPIAEALETDNKVKALWLKRNP 1352

Query: 455  IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            +   G + L+ +L+ +  +  L +  C I   G E +   L++N+T+  L +  NGL  +
Sbjct: 1353 LLTAGCRPLAAMLEKNSYLQILDVLNCGILDEGVEILFGALQHNSTLRHLYIDTNGLTPK 1412

Query: 515  GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
             A  + +  +     L +I ++ N + D GA  +A  L    D  +  L L++N +   G
Sbjct: 1413 SATTVRKHLETGLNKLETIYMSCNHLGDAGASELAAGLLG--DKTLLRLGLSSNCIGPAG 1470

Query: 575  QSALTDAKDLVYEMSEKEVNIFF 597
               L DA  ++   S  E+N+ F
Sbjct: 1471 TKELVDA--VIKHPSLLELNLGF 1491


>gi|156381140|ref|XP_001632124.1| predicted protein [Nematostella vectensis]
 gi|156219175|gb|EDO40061.1| predicted protein [Nematostella vectensis]
          Length = 366

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 176/393 (44%), Gaps = 37/393 (9%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   ++  L  N    E+     GI  +G +A    +Q N+ L  L++S NPIG  
Sbjct: 1   IGDLGAQRISNGLALNTKVTELILVDAGIGPSGTQALAKAIQ-NVTL--LDMSINPIGLA 57

Query: 234 GVKCLCDILVDNAG-VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           G+  + +IL DN+  ++ L L    +   GA++I++ L  N+ L  L L  N ID  G  
Sbjct: 58  GLNAIANILQDNSCRLKTLILDGCGINMFGARSISKALSKNTSLEKLSLACNNIDDEGMC 117

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
                                       ALAK +   KSL+ L +  N I D G +A++ 
Sbjct: 118 ----------------------------ALAKYVTKTKSLQSLDISYNHISDVGKKAIID 149

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
             S     L+   I + SI    A  +AE +    +L  I +    +GD G + IA+ALK
Sbjct: 150 ACSENNSTLSTFHIHSPSIDDNCAIALAEVLSGNTTLTDIYIGGEILGDAGVQYIAEALK 209

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD--LAYNPIGADGAKALSEVLKFH 470
            N TI T+ +    +      A   +L+ N+ IT L    ++  I   GA+ +S+ L  +
Sbjct: 210 FNTTIRTLAINPGRVTPDAGQAFGEMLRHNNTITRLTSIHSHGNIVDLGAQRISDGLALN 269

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEAL 530
             +  L L    IG SG   +A  ++    +++LD+ AN +  EG   +A   +  +  L
Sbjct: 270 TKVTELTLVNAGIGPSGTRALAKAIQ---NVTLLDMSANPIGLEGLNAIANILQDNSCRL 326

Query: 531 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
            S+ L    I  DGA +I++AL  N  +   SL
Sbjct: 327 KSLILDGCCINMDGARSISKALSKNTSLEKLSL 359



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 165/360 (45%), Gaps = 33/360 (9%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQ 215
            AK ++  + +DMS    G  GL  +A  L  N    + +     GI   G ++    L 
Sbjct: 37  LAKAIQNVTLLDMSINPIGLAGLNAIANILQDNSCRLKTLILDGCGINMFGARSISKALS 96

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNS 274
            N +L+ L+L+ N I DEG+  L   +     ++ L +S   + D G KAI +   +NNS
Sbjct: 97  KNTSLEKLSLACNNIDDEGMCALAKYVTKTKSLQSLDISYNHISDVGKKAIIDACSENNS 156

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L    +++  ID +   +LAE L  N+T+  +++ G   G  G   +A+ L+ N ++R 
Sbjct: 157 TLSTFHIHSPSIDDNCAIALAEVLSGNTTLTDIYIGGEILGDAGVQYIAEALKFNTTIRT 216

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L ++   +  +  +A    L             NN+I+   + H                
Sbjct: 217 LAINPGRVTPDAGQAFGEMLRH-----------NNTITRLTSIH---------------- 249

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
              +I D GA++I+D L  N  +T + L    I   G  A+A+ +++   +T LD++ NP
Sbjct: 250 SHGNIVDLGAQRISDGLALNTKVTELTLVNAGIGPSGTRALAKAIQN---VTLLDMSANP 306

Query: 455 IGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           IG +G  A++ +L+ +   + +L L  C I   GA  ++  L  N ++  L L  N + D
Sbjct: 307 IGLEGLNAIANILQDNSCRLKSLILDGCCINMDGARSISKALSKNTSLEKLSLACNNIGD 366



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 38/227 (16%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           K  ++  ++     S+  +   +  D     LAE L  N T  ++      +  AG++  
Sbjct: 145 KAIIDACSENNSTLSTFHIHSPSIDDNCAIALAEVLSGNTTLTDIYIGGEILGDAGVQYI 204

Query: 211 DGVLQSNIALKTLNLSGNP--------------------------------IGDEGVKCL 238
              L+ N  ++TL +  NP                                I D G + +
Sbjct: 205 AEALKFNTTIRTLAI--NPGRVTPDAGQAFGEMLRHNNTITRLTSIHSHGNIVDLGAQRI 262

Query: 239 CDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL 298
            D L  N  V  L L +  +   G +A+A+ ++N   + +L+++ N I   G  ++A  L
Sbjct: 263 SDGLALNTKVTELTLVNAGIGPSGTRALAKAIQN---VTLLDMSANPIGLEGLNAIANIL 319

Query: 299 LENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +NS  ++SL L+G      GA +++K L  N SL +L L  N+IGD
Sbjct: 320 QDNSCRLKSLILDGCCINMDGARSISKALSKNTSLEKLSLACNNIGD 366


>gi|28827813|ref|NP_789792.1| NACHT, LRR and PYD domains-containing protein 14 [Homo sapiens]
 gi|38372322|sp|Q86W24.1|NAL14_HUMAN RecName: Full=NACHT, LRR and PYD domains-containing protein 14;
           AltName: Full=Nucleotide-binding oligomerization domain
           protein 5
 gi|28436382|gb|AAO18165.1| NALP14 [Homo sapiens]
 gi|30348938|tpg|DAA01240.1| TPA_inf: NOD5 [Homo sapiens]
 gi|162318954|gb|AAI56269.1| NLR family, pyrin domain containing 14 [synthetic construct]
          Length = 1093

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 154/319 (48%), Gaps = 6/319 (1%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L   L   N  ++ L L        G   ++ 
Sbjct: 665 LCSVLHTNEHLRELDLYHSNLDKSAMNILHHELRHPNCKLQKLLLKF-ITFPDGCQDIST 723

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  NK+L  L L G+ IGD G+++L   L   + KL  L + + +++     +++  + 
Sbjct: 724 SLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALI 783

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 784 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNK 843

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 844 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLT 903

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            LDL +N L+D G K L   F+  +  L  ++L    + +     +A  +  N ++   S
Sbjct: 904 HLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLR--S 961

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+L NN L   G   L DA
Sbjct: 962 LDLGNNDLQDDGVKILCDA 980



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 4/306 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD G+  L E+L + +   + +   +  +T          L  + +L  LNL
Sbjct: 734  LDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRSQSLIFLNL 793

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GV+ LC+ L      +ERL L S  L + G + ++  L +N  L  L L +N
Sbjct: 794  STNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRLTHLCLADN 853

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   +++AL     T++SL L   +  +L +  L+  L  NKSL  L L  N + 
Sbjct: 854  VLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHLDLGSNWLQ 913

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D G++ L          L  L++    ++      +A  I N  +L  ++L  ND+ D+G
Sbjct: 914  DNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQDDG 973

Query: 404  AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + DAL+  N  I  + L    + S     ++  L  N  +  ++L  N +G +G   
Sbjct: 974  VKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEGIVK 1033

Query: 463  LSEVLK 468
            L +VLK
Sbjct: 1034 LYKVLK 1039



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 149/340 (43%), Gaps = 16/340 (4%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      
Sbjct: 717  GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I+  L  +  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISNALIRSQSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  NK L  L L  N +GD G++ +   L   +  L  L +     ++  + +++  
Sbjct: 836  SLALISNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            + + KSL  ++L  N + D G + + D  +     +  ++L G  + +     +A V+ +
Sbjct: 896  LLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  + SLDL  N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  
Sbjct: 956  NPNLRSLDLGNNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKR 1015

Query: 501  ISILDLRANGLRDEG----------AKCLAQSFKVVNEAL 530
            +  ++L  N L  EG           KC  Q   +  EA 
Sbjct: 1016 LIKMNLTQNTLGYEGIVKLYKVLKSPKCKLQVLGLCKEAF 1055



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 169/363 (46%), Gaps = 7/363 (1%)

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLC-DILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             VL +N  L+ L+L  + +    +  L  ++   N  +++L L  +   D G + I+  L
Sbjct: 667  SVLHTNEHLRELDLYHSNLDKSAMNILHHELRHPNCKLQKLLLKFITFPD-GCQDISTSL 725

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN 329
             +N  L  L+L  + I  +G  SL EAL      +++L L            ++  L  +
Sbjct: 726  IHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRS 785

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL  L+L  N++ D+G++ L   L   K  L  L + +  ++  G  +++  + + K L
Sbjct: 786  QSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRL 845

Query: 390  LWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              + L  N +GD G + ++DAL+  + T+ ++ L   +  S  +  ++  L  N  +T L
Sbjct: 846  THLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHL 905

Query: 449  DLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            DL  N +  +G K L +V +    N+  L+L  C +  +    +A ++  N  +  LDL 
Sbjct: 906  DLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLG 965

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
             N L+D+G K L  + +  N  +  + L +  +       ++ AL  N+   +  +NL  
Sbjct: 966  NNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNK--RLIKMNLTQ 1023

Query: 568  NFL 570
            N L
Sbjct: 1024 NTL 1026


>gi|354479045|ref|XP_003501724.1| PREDICTED: T-complex-associated testis-expressed protein 1
           [Cricetulus griseus]
 gi|344245236|gb|EGW01340.1| T-complex-associated testis-expressed protein 1 [Cricetulus
           griseus]
          Length = 498

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 2/187 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  +    SLA  +    T++   L  +      A  L + L  + +L EL L 
Sbjct: 253 FEWNLFLFTFRDCHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 312

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N 
Sbjct: 313 HNLIGDRGARAAAKLLS--HSRLRVLNLANNQLRAPGAQSLAHALAHNTNLVSLNLRLNC 370

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + IA AL+ N+ +TT+ LGGN +    A+ +++VL  N+++TSL+L+ N IG D
Sbjct: 371 IEDEGGQAIAHALETNKCLTTLHLGGNELSEPTATVLSQVLPINTILTSLNLSCNHIGVD 430

Query: 459 GAKALSE 465
           G K L E
Sbjct: 431 GGKQLLE 437



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 105/212 (49%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 269 AATIKACH-------TLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGA 321

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +A A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  A+A
Sbjct: 322 RAAAKLL-SHSRLRVLNLANNQLRAPGAQSLAHALAHNTNLVSLNLRLNCIEDEGGQAIA 380

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             LE NK L  LHL GN +  E    ++S +      L  L++  N I   G   + E +
Sbjct: 381 HALETNKCLTTLHLGGNELS-EPTATVLSQVLPINTILTSLNLSCNHIGVDGGKQLLEGM 439

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
              K++L  +L ++D+  E    I  AL  NR
Sbjct: 440 SENKTILEFDLRLSDVSQESEYLIGQALHANR 471



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 2/211 (0%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R L+  L      L  LD+ +N I  +GA  
Sbjct: 265 CHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPA-LEELDLSHNLIGDRGARA 323

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  AIA  
Sbjct: 324 AAKLLSHSR-LRVLNLANNQLRAPGAQSLAHALAHNTNLVSLNLRLNCIEDEGGQAIAHA 382

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  LS+VL  +  + +L L    IG  G + + + +  N
Sbjct: 383 LETNKCLTTLHLGGNELSEPTATVLSQVLPINTILTSLNLSCNHIGVDGGKQLLEGMSEN 442

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
            TI   DLR + +  E    + Q+     EA
Sbjct: 443 KTILEFDLRLSDVSQESEYLIGQALHANREA 473



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 91/182 (50%), Gaps = 2/182 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N IGD GA   A  L  +R +  ++L  N + + GA ++A  L  N+ + SL+L 
Sbjct: 309 LDLSHNLIGDRGARAAAKLLSHSR-LRVLNLANNQLRAPGAQSLAHALAHNTNLVSLNLR 367

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I  +G +A++  L+ +  + TL LG  ++    A  ++ +L  N  ++ L+L  N +
Sbjct: 368 LNCIEDEGGQAIAHALETNKCLTTLHLGGNELSEPTATVLSQVLPINTILTSLNLSCNHI 427

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
             +G K L +     N+ +   DL  +++  +  + I QAL AN + A        +F+T
Sbjct: 428 GVDGGKQLLEGMSE-NKTILEFDLRLSDVSQESEYLIGQALHANREAARQRALNPGHFMT 486

Query: 572 KF 573
             
Sbjct: 487 PI 488



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 253 FEWNLFLFTFRDCHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 312

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +A   +L S+  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 313 HNLIGDRGARAAAKLL-SHSRLRVLNLANNQLRAPGAQSLAHALAHNTNLVSLNLRLNCI 371

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +AIA  L+ N  L  L L  N +     T L++ L  N+ + SL+L+ N+ G  G
Sbjct: 372 EDEGGQAIAHALETNKCLTTLHLGGNELSEPTATVLSQVLPINTILTSLNLSCNHIGVDG 431

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK++ E  L  + +  E
Sbjct: 432 GKQLLEGMSENKTILEFDLRLSDVSQE 458



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 34/197 (17%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+    L  + +    A  + R L D+
Sbjct: 246 VKDCGMNFEWNLFLFTFRD--CHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDH 303

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  LDL++N IG  GA+A +++L                              ++ + 
Sbjct: 304 PALEELDLSHNLIGDRGARAAAKLLS-----------------------------HSRLR 334

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
           +L+L  N LR  GA+ LA +    N  L S++L  N I D+G  AIA AL+ N+   +T+
Sbjct: 335 VLNLANNQLRAPGAQSLAHAL-AHNTNLVSLNLRLNCIEDEGGQAIAHALETNK--CLTT 391

Query: 563 LNLANNFLTKFGQSALT 579
           L+L  N L++   + L+
Sbjct: 392 LHLGGNELSEPTATVLS 408


>gi|399498106|emb|CCG20381.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMTDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNTTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 144/316 (45%), Gaps = 30/316 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMTDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NN     G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNTTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSID 534
           L + FK   E L S++
Sbjct: 487 LKEIFKKSPEMLASLE 502



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L +  + IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMTDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNTTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 145/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K  +   +L EL L  + I  E   A +S L     KL VL   NN+   +GA  +AE 
Sbjct: 235 GKLFQSQTNLEELFLMTDGISQEAANA-VSELVPSTEKLKVLHFHNNTTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  A  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  N  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMTDGISQEAANAVSELVPSTEKLKVLHFHNNTTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 4/258 (1%)

Query: 136 TNLLSGF--TGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           TNL   F  T  + +E+   ++E          +       GDEG   +AE +  +   E
Sbjct: 242 TNLEELFLMTDGISQEAANAVSELVPSTEKLKVLHFHNNTTGDEGAVAIAEIVKRSPLLE 301

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           +   ++  + + G       L     LK L+L  N  G E    LC  L  +  +  + L
Sbjct: 302 DFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYL 361

Query: 254 SSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           S ++L DEGA AIA  LK+++  L VLE+  N I      ++A  +     +  L L  N
Sbjct: 362 SYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGEN 421

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                GA  +AK LEG+  L E+ +  N++   G R L   +   K +  +L++  N IS
Sbjct: 422 ELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTV-LHKDEFKLLNVNGNFIS 480

Query: 373 AKGAFHVAEYIKNCKSLL 390
            +G   + E  K    +L
Sbjct: 481 EEGVDELKEIFKKSPEML 498



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MTDGISQEAANAVSELVPSTEKLKVLHFHNNTTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLS 417


>gi|426366743|ref|XP_004050406.1| PREDICTED: ribonuclease inhibitor-like [Gorilla gorilla gorilla]
          Length = 350

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 145/327 (44%), Gaps = 4/327 (1%)

Query: 201 GITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLR 259
           G+T A  K     L+ N AL  LNL  N +GD GV C+   L   +  +++L L +  L 
Sbjct: 13  GLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLT 72

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALG 318
             G   ++  L++   L+ L L++N++  +G   L E LL+    +  L L      A  
Sbjct: 73  GAGCGVLSSTLRSLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAAS 132

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              LA  L      +EL +  N I + G+R L  GL     +L  L + +  +++     
Sbjct: 133 CEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRD 192

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEG-AEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           +   + +  SL  + L  N +GD G AE     L  +  + T+ +    I +KG   + R
Sbjct: 193 LCGIVASKASLRELALGSNRLGDVGIAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 252

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLR 496
           VL+    +  L LA N +G +GA+ L E L   G  + +L +  C   A+     + +L 
Sbjct: 253 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLA 312

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSF 523
            N  +  L +  N L D G + L Q  
Sbjct: 313 QNKFLLELQISNNRLEDAGVRELCQGL 339



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 152/322 (47%), Gaps = 6/322 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
           A + +++     GD G+  + + L       +++S     +T AG       L+S   L+
Sbjct: 31  ALAELNLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSSTLRSLPTLQ 90

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L+LS N +GD G++ LC+ L+D    +E+LQL   +L     + +A +L+     + L 
Sbjct: 91  ELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCEPLASVLRAKPDFKELT 150

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           ++NN I+ +G   L + L ++   + +L L      +     L   +    SLREL L  
Sbjct: 151 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 210

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N +GD GI  L  GL     +L  L I    I+AKG   +   ++  +SL  ++L  N++
Sbjct: 211 NRLGDVGIAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 270

Query: 400 GDEGAEKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           GDEGA  + +  L+    + ++ +   +  +   S  + VL  N  +  L ++ N +   
Sbjct: 271 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNKFLLELQISNNRLEDA 330

Query: 459 GAKALSEVLKFHGNINTLKLGW 480
           G + L + L   G++  L++ W
Sbjct: 331 GVRELCQGLGQPGSV--LRVLW 350



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 3/275 (1%)

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLN 310
           +L    L +   K I+  L+ N  L  L L +N +   G   + + L   S  I+ L L 
Sbjct: 8   RLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQ 67

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                  G   L+  L    +L+ELHL  N +GD G++ L  GL   + +L  L +   +
Sbjct: 68  NCCLTGAGCGVLSSTLRSLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCN 127

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHS 429
           +SA     +A  ++       + +  NDI + G   +   LK +   +  + L    + S
Sbjct: 128 LSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTS 187

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGASGA 488
                +  ++   + +  L L  N +G  G   L   +L     + TL +  C I A G 
Sbjct: 188 DNCRDLCGIVASKASLRELALGSNRLGDVGIAELCPGLLHPSSRLRTLWIWECGITAKGC 247

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
             +  +LR   ++  L L  N L DEGA+ L ++ 
Sbjct: 248 GDLCRVLRAKESLKELSLAGNELGDEGARLLCETL 282



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 114/262 (43%), Gaps = 32/262 (12%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           ++  L  N +L EL+L  N +GD G+  ++ GL S   K+  L + N  ++  G   ++ 
Sbjct: 22  ISSALRVNPALAELNLRSNELGDVGVHCVLQGLQSPSCKIQKLSLQNCCLTGAGCGVLSS 81

Query: 382 YIKNCKSLLWINLYMNDIGDEG-----------------------------AEKIADALK 412
            +++  +L  ++L  N +GD G                              E +A  L+
Sbjct: 82  TLRSLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCNLSAASCEPLASVLR 141

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHG 471
                  + +  N+I+  G   + + LKD+   + +L L    + +D  + L  ++    
Sbjct: 142 AKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKA 201

Query: 472 NINTLKLGWCQIGASG-AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEAL 530
           ++  L LG  ++G  G AE    +L  ++ +  L +   G+  +G   L +  +   E+L
Sbjct: 202 SLRELALGSNRLGDVGIAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRA-KESL 260

Query: 531 TSIDLAFNEIRDDGAFAIAQAL 552
             + LA NE+ D+GA  + + L
Sbjct: 261 KELSLAGNELGDEGARLLCETL 282


>gi|301774444|ref|XP_002922630.1| PREDICTED: ribonuclease inhibitor-like [Ailuropoda melanoleuca]
          Length = 363

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 154/330 (46%), Gaps = 9/330 (2%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRD 260
           ++ A   A   VL ++  L  L  S   +    +K LC+ L D N  +++L+L +  L +
Sbjct: 25  LSPAPCGALAAVLSTSQWLTDLEFSETKLEASALKLLCEDLKDPNCKLQKLKLCASLLPE 84

Query: 261 EG---AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGA 316
                 K +A +L  N  L  L+L+ N +  +G   L E L   N  +  L L+  Y   
Sbjct: 85  SPEVVCKYLAAVLICNPNLTELDLSENPLGDTGVKYLCEGLRHSNCKVEKLDLSTCYLTD 144

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                L+  L+ +++L+EL +  +++GD G++ L  GL   KG L  L +   S+SA   
Sbjct: 145 ASCMELSSFLQVSQTLKELFVFASALGDTGVQHLCEGLRHAKGILENLVLSECSLSAACC 204

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA-- 434
             +A+ + + +SL  + L  N I D G + + + LKQ       DL   N H  G     
Sbjct: 205 ESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQ-PDCQLKDLALWNCHLTGECCQD 263

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVAD 493
           +   L  N  +  LDL+ N +G  G + L E LK     ++TL L  C +  +    +A 
Sbjct: 264 LCNALYTNEYLRDLDLSDNALGNGGMQVLCEGLKHPSCKLHTLWLAECHLTDACCGALAS 323

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSF 523
           +L  N  +++LDL  N L+D G + L  S 
Sbjct: 324 VLNRNENLTLLDLSGNDLKDFGVQMLCDSL 353



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 153/343 (44%), Gaps = 8/343 (2%)

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NST 303
           N  ++ L+L    L      A+A +L  +  L  LE +   ++ S    L E L + N  
Sbjct: 12  NCILQTLRLYRCLLSPAPCGALAAVLSTSQWLTDLEFSETKLEASALKLLCEDLKDPNCK 71

Query: 304 IRSLHLNGNY---GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
           ++ L L  +       +    LA  L  N +L EL L  N +GD G++ L  GL     K
Sbjct: 72  LQKLKLCASLLPESPEVVCKYLAAVLICNPNLTELDLSENPLGDTGVKYLCEGLRHSNCK 131

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI-TT 419
           +  LD+    ++      ++ +++  ++L  + ++ + +GD G + + + L+  + I   
Sbjct: 132 VEKLDLSTCYLTDASCMELSSFLQVSQTLKELFVFASALGDTGVQHLCEGLRHAKGILEN 191

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKL 478
           + L   ++ +    ++A+VL     +T L L  N I   G K L E LK     +  L L
Sbjct: 192 LVLSECSLSAACCESLAQVLSSTRSLTRLLLINNKIEDLGLKLLCEGLKQPDCQLKDLAL 251

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
             C +     + + + L  N  +  LDL  N L + G + L +  K  +  L ++ LA  
Sbjct: 252 WNCHLTGECCQDLCNALYTNEYLRDLDLSDNALGNGGMQVLCEGLKHPSCKLHTLWLAEC 311

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            + D    A+A  L  NE+  +T L+L+ N L  FG   L D+
Sbjct: 312 HLTDACCGALASVLNRNEN--LTLLDLSGNDLKDFGVQMLCDS 352



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 120/258 (46%), Gaps = 13/258 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + +D+S    GD G+ +L E L + N   E++  +   +T A        LQ +  LK 
Sbjct: 103 LTELDLSENPLGDTGVKYLCEGLRHSNCKVEKLDLSTCYLTDASCMELSSFLQVSQTLKE 162

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L +  + +GD GV+ LC+ L    G+ E L LS   L     +++A++L +   L  L L
Sbjct: 163 LFVFASALGDTGVQHLCEGLRHAKGILENLVLSECSLSAACCESLAQVLSSTRSLTRLLL 222

Query: 282 NNNMIDYSGFTSLAEAL------LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            NN I+  G   L E L      L++  + + HL G          L   L  N+ LR+L
Sbjct: 223 INNKIEDLGLKLLCEGLKQPDCQLKDLALWNCHLTGE-----CCQDLCNALYTNEYLRDL 277

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            L  N++G+ G++ L  GL     KL  L +    ++      +A  +   ++L  ++L 
Sbjct: 278 DLSDNALGNGGMQVLCEGLKHPSCKLHTLWLAECHLTDACCGALASVLNRNENLTLLDLS 337

Query: 396 MNDIGDEGAEKIADALKQ 413
            ND+ D G + + D+L Q
Sbjct: 338 GNDLKDFGVQMLCDSLIQ 355


>gi|449274476|gb|EMC83618.1| Ribonuclease inhibitor [Columba livia]
          Length = 456

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 172/367 (46%), Gaps = 5/367 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN-GITAAGIKAFDGVLQSNIALK 221
           + + + ++    GD G+ +L + L     + +  +  N  +T+A  +    VL +  +L 
Sbjct: 52  SLTELKLNNNELGDAGMEYLCKGLLMPSCSLQKLWLQNCNLTSASCETLCSVLSAQPSLT 111

Query: 222 TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            L++  N +G  GVK LC  +++ N  +++LQL   +L  +  +A+   L++   L+ L 
Sbjct: 112 ELHVGDNKLGTGGVKVLCQGMMNPNCKLQKLQLEYCELTGDIVEALNVALQSKPTLKELS 171

Query: 281 LNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           L+NN +  +    L   L+E S  +  LHL      +     ++  L    SL +L +  
Sbjct: 172 LSNNTLGDTAVKQLCRGLVEASCNLELLHLENCGITSDSCREISAVLSNKSSLIDLSVGD 231

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G+  L  GL     K+  L + +  +++     ++  +   ++L  I+L  N++
Sbjct: 232 NKIGDSGLALLCQGLMHPNCKIQKLWLWDCDLTSASCKDLSRLLSTKETLTEISLIDNNL 291

Query: 400 GDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            D G E +  ALK  ++ +  + +    + +    AI+  L  N  +  L +  N +G  
Sbjct: 292 RDSGMEMLCQALKDPKSKLQELWIRECGLTTACCKAISSALSVNKHLKVLHMGENKLGDA 351

Query: 459 GAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           G + + E +L    NI +L LG C + A+    +  ++     ++ LDL  N L DEG +
Sbjct: 352 GVELMCEGLLHPSCNIQSLWLGNCDLTAACCATLGTVMATKQCLTELDLSYNSLEDEGVR 411

Query: 518 CLAQSFK 524
            + ++ +
Sbjct: 412 KICEALR 418



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 106/451 (23%), Positives = 194/451 (43%), Gaps = 48/451 (10%)

Query: 183 AESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-I 241
           AE L   ++ + +      ++++  +    ++  N +L  L L+ N +GD G++ LC  +
Sbjct: 16  AELLSTMKSCKTIRLDDCNLSSSNCEDLCSIINMNPSLTELKLNNNELGDAGMEYLCKGL 75

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL-E 300
           L+ +  +++L L + +L     + +  +L     L  L + +N +   G   L + ++  
Sbjct: 76  LMPSCSLQKLWLQNCNLTSASCETLCSVLSAQPSLTELHVGDNKLGTGGVKVLCQGMMNP 135

Query: 301 NSTIRSLHLNGNYGGALG--ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           N  ++ L L   Y    G    AL   L+   +L+EL L  N++GD  ++ L  GL    
Sbjct: 136 NCKLQKLQL--EYCELTGDIVEALNVALQSKPTLKELSLSNNTLGDTAVKQLCRGLVEAS 193

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG--------------- 403
             L +L + N  I++     ++  + N  SL+ +++  N IGD G               
Sbjct: 194 CNLELLHLENCGITSDSCREISAVLSNKSSLIDLSVGDNKIGDSGLALLCQGLMHPNCKI 253

Query: 404 --------------AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD-NSVITSL 448
                          + ++  L    T+T I L  NN+   G   + + LKD  S +  L
Sbjct: 254 QKLWLWDCDLTSASCKDLSRLLSTKETLTEISLIDNNLRDSGMEMLCQALKDPKSKLQEL 313

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD-MLRYNNTISILDLR 507
            +    +     KA+S  L  + ++  L +G  ++G +G E + + +L  +  I  L L 
Sbjct: 314 WIRECGLTTACCKAISSALSVNKHLKVLHMGENKLGDAGVELMCEGLLHPSCNIQSLWL- 372

Query: 508 ANGLRDEGAKCLAQ--SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
             G  D  A C A   +     + LT +DL++N + D+G   I +AL+ N    V  L L
Sbjct: 373 --GNCDLTAACCATLGTVMATKQCLTELDLSYNSLEDEGVRKICEALR-NPSCNVQQLIL 429

Query: 566 ANNFLTKFGQSALTDAKDLVYEMSEKEVNIF 596
            + F      S+  D +    E S+ EV I 
Sbjct: 430 YDIF-----WSSEVDDELRALEESKPEVKII 455



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 13/267 (4%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN-GITAAGI 207
           +SK TL E +          +S    GD  +  L   L       E+    N GIT+   
Sbjct: 162 QSKPTLKELS----------LSNNTLGDTAVKQLCRGLVEASCNLELLHLENCGITSDSC 211

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRDEGAKAI 266
           +    VL +  +L  L++  N IGD G+  LC  ++  N  +++L L   DL     K +
Sbjct: 212 REISAVLSNKSSLIDLSVGDNKIGDSGLALLCQGLMHPNCKIQKLWLWDCDLTSASCKDL 271

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKG 325
           + LL     L  + L +N +  SG   L +AL +  S ++ L +           A++  
Sbjct: 272 SRLLSTKETLTEISLIDNNLRDSGMEMLCQALKDPKSKLQELWIRECGLTTACCKAISSA 331

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L  NK L+ LH+  N +GD G+  +  GL      +  L +GN  ++A     +   +  
Sbjct: 332 LSVNKHLKVLHMGENKLGDAGVELMCEGLLHPSCNIQSLWLGNCDLTAACCATLGTVMAT 391

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALK 412
            + L  ++L  N + DEG  KI +AL+
Sbjct: 392 KQCLTELDLSYNSLEDEGVRKICEALR 418


>gi|297695587|ref|XP_002825013.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Pongo abelii]
          Length = 488

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 135/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 168

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  +E A  +  AL  N  I  +DL  N
Sbjct: 169 SNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKEESAALLGQALSTNYRIKKLDLSHN 228

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 229 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLAKLDLSMNGLGN 288

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
             A  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 289 EVALALGEVLRLNSCLVYLDISGNDIGNEGASKISKGLES-NESLRVLKLFLNPINMDGA 347

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  A+K N    +  L+++N  +++
Sbjct: 348 ILLILAIKRNPKSRMEELDISNVLVSE 374



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 104 NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 163

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 164 QEMNISNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKEESAALLGQALSTNYRIKKL 223

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      LA LD+ 
Sbjct: 224 DLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLAKLDLS 282

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N +  + A  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 283 MNGLGNEVALALGEVLRLNSCLVYLDISGNDIGNEGASKISKGLESNESLRVLKLFLNPI 342

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 343 NMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 393



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE-EVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 145 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKE 204

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 205 ESAALLGQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 264

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N +      +L E L  NS +  L ++GN  G  GA+ ++K
Sbjct: 265 ALCNGLRGNVTLAKLDLSMNGLGNEVALALGEVLRLNSCLVYLDISGNDIGNEGASKISK 324

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 325 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 375


>gi|29838751|gb|AAN52938.1| NOD2 [Mus spretus]
          Length = 1013

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 282 NNNMIDYSGFTSLAEALLE-------NSTIRSL---HLNGNYG--GALGANALAKGLEGN 329
             +M    GF  L  +L E          +R L   HL   +   G     ALA  L+  
Sbjct: 703 TKSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLKHL 762

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           +    L L  NS+GD G+  L   L    G    L + +N+IS +GA  + E    C+ L
Sbjct: 763 QRPVALQLDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGACTLVECALRCEQL 818

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
             + L+ N + D  A  +A  L   +   ++ +G N+I + GA  +A+ LK N+ +  L 
Sbjct: 819 QKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLG 878

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
              N +G  G +AL+EV+  H N+  L L    IG+ GA+ +A ML  N ++  L L  N
Sbjct: 879 FWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEEN 938

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            + DEG   LA+  K  N  L  + L+ N I   GA A+ QAL  N  +
Sbjct: 939 HICDEGVYSLAEGLK-RNSTLKFLKLSNNGITYRGAEALLQALSRNSAI 986



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 126/252 (50%), Gaps = 9/252 (3%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKN 272
            LQ  +AL+   L  N +GD GV+ L   L    GV   L L   ++ D GA  + E    
Sbjct: 762  LQRPVALQ---LDYNSVGDVGVEQLRPCL----GVCTALYLRDNNISDRGACTLVECALR 814

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
               L+ L L NN +  +   S+A+ L       SL +  N+  A GA  LA+GL+ N SL
Sbjct: 815  CEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSL 874

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            + L   GNS+GD+G +AL   ++  +  L  L +  N+I + GA  +A  ++  KSL  +
Sbjct: 875  KFLGFWGNSVGDKGTQALAEVVADHQN-LKWLSLVGNNIGSMGAQALALMLEKNKSLEEL 933

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
             L  N I DEG   +A+ LK+N T+  + L  N I  +GA A+ + L  NS I  + L  
Sbjct: 934  CLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRG 993

Query: 453  NPIGADGAKALS 464
            N    +  + LS
Sbjct: 994  NTFSLEEIQTLS 1005



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 103/209 (49%), Gaps = 4/209 (1%)

Query: 153  TLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDG 212
            TL E A        + +      D     +A+ L + Q    +    N ITAAG +    
Sbjct: 807  TLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQ 866

Query: 213  VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
             L+SN +LK L   GN +GD+G + L +++ D+  ++ L L   ++   GA+A+A +L+ 
Sbjct: 867  GLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEK 926

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            N  L  L L  N I   G  SLAE L  NST++ L L+ N     GA AL + L  N ++
Sbjct: 927  NKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAI 986

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             E+ L GN+   E I+     LSSR  +L
Sbjct: 987  LEVWLRGNTFSLEEIQT----LSSRDARL 1011



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            A+A +LK+      L+L+ N +   G   L   L       +L+L  N     GA  L +
Sbjct: 754  ALAFVLKHLQRPVALQLDYNSVGDVGVEQLRPCL---GVCTALYLRDNNISDRGACTLVE 810

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
                 + L++L L  N + D      M+ L + K     L +GNN I+A GA  +A+ +K
Sbjct: 811  CALRCEQLQKLALFNNKLTD-ACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLK 869

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +  SL ++  + N +GD+G + +A+ +  ++ +  + L GNNI S GA A+A +L+ N  
Sbjct: 870  SNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKS 929

Query: 445  ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
            +  L L  N I  +G  +L+E LK +  +  LKL    I   GAE +   L  N+ I  +
Sbjct: 930  LEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEV 989

Query: 505  DLRANGLRDEGAKCLA 520
             LR N    E  + L+
Sbjct: 990  WLRGNTFSLEEIQTLS 1005



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 86/174 (49%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F S+ +   +    G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   V+  +  LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAQALALMLEKNKSLEELCLEENHI 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            DEG  ++AE LK NS L+ L+L+NN I Y G  +L +AL  NS I  + L GN
Sbjct: 941 CDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWLRGN 994


>gi|300693896|ref|YP_003749869.1| type III effector protein [Ralstonia solanacearum PSI07]
 gi|299075933|emb|CBJ35242.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
           solanacearum PSI07]
          Length = 1002

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 175/366 (47%), Gaps = 52/366 (14%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L++L+LS  PIGD G +    +L  +  +  L LS  ++ D GA A A+    N+ L  L
Sbjct: 602 LESLDLSDTPIGDRGAQ----LLASSTSLTSLNLSGNEISDAGAAAFAD----NTSLTSL 653

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L  N I  +G    AEAL  N+ + SL ++ N  G  G  ALA     ++SL  L+L  
Sbjct: 654 NLRGNHISDAG----AEALGRNTVLTSLDVSANPIGNTGVQALAS----SRSLTSLNLCS 705

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
             I DEG+ AL S    R      LDI +N     GA   AE  +N ++L  +      +
Sbjct: 706 TWIEDEGVEALASNTVLRS-----LDISHNRF---GAQFAAELAQN-RTLASLKANHCSL 756

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            +  A+++A      R++T ++L  N I   G  AI R    N+ + SLDL+ NPIG  G
Sbjct: 757 TNNVAQQLASI----RSLTALELSSNLIDDAGVQAIVR----NASLRSLDLSQNPIGLGG 808

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
             AL+        + +L +     G  G      +L  + ++++L L +NG+  EG + L
Sbjct: 809 LHALA----LSRTLTSLDVSCIGCGDRGGL----VLSKSRSLTLLKLGSNGIASEGVQIL 860

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
           A      N +L S+DL+ N I        A+AL  N  +A  SLN ++  L     SAL 
Sbjct: 861 A-----ANRSLISLDLSGNTID----VVAARALAKNPRLA--SLNASSCGLDDAAVSALA 909

Query: 580 DAKDLV 585
           +++ L 
Sbjct: 910 ESRSLT 915



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 186/410 (45%), Gaps = 70/410 (17%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAES---LGYNQTAEEVSFA-----------------ANG 201
           R   S+D+S    GD G   LA S      N +  E+S A                  N 
Sbjct: 600 RKLESLDLSDTPIGDRGAQLLASSTSLTSLNLSGNEISDAGAAAFADNTSLTSLNLRGNH 659

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I+ AG +A    L  N  L +L++S NPIG+ GV+ L      +  +  L L S  + DE
Sbjct: 660 ISDAGAEA----LGRNTVLTSLDVSANPIGNTGVQALA----SSRSLTSLNLCSTWIEDE 711

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G +A+A    +N++LR L++++N          A  L +N T+ SL  N         N 
Sbjct: 712 GVEALA----SNTVLRSLDISHNRFG----AQFAAELAQNRTLASLKAN----HCSLTNN 759

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A+ L   +SL  L L  N I D G++A++     R   L  LD+  N I   G  H   
Sbjct: 760 VAQQLASIRSLTALELSSNLIDDAGVQAIV-----RNASLRSLDLSQNPI-GLGGLHALA 813

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
             +   SL   ++     GD G       L ++R++T + LG N I S+G     ++L  
Sbjct: 814 LSRTLTSL---DVSCIGCGDRGGL----VLSKSRSLTLLKLGSNGIASEG----VQILAA 862

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  + SLDL+ N I    A+AL++    +  + +L    C +  +    +A+    + ++
Sbjct: 863 NRSLISLDLSGNTIDVVAARALAK----NPRLASLNASSCGLDDAAVSALAE----SRSL 914

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
           + LD+  N L   GA+ LA      N  LTS++++ N I   GA A+A++
Sbjct: 915 TSLDVSKNRLFSPGARALAG-----NRVLTSLNISHNRIGFHGAAALAES 959



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 183/408 (44%), Gaps = 115/408 (28%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + +S+++ G +  D G    AE+LG N     +  +AN I   G++A    L S+ +L +
Sbjct: 649 SLTSLNLRGNHISDAG----AEALGRNTVLTSLDVSANPIGNTGVQA----LASSRSLTS 700

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE--GAKAIAELLKNNSI----- 275
           LNL    I DEGV+ L    V         L S+D+     GA+  AEL +N ++     
Sbjct: 701 LNLCSTWIEDEGVEALASNTV---------LRSLDISHNRFGAQFAAELAQNRTLASLKA 751

Query: 276 ------------------LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
                             L  LEL++N+ID +G     +A++ N+++RSL L+ N  G  
Sbjct: 752 NHCSLTNNVAQQLASIRSLTALELSSNLIDDAGV----QAIVRNASLRSLDLSQNPIGLG 807

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G +ALA     +++L  L +     GD G   L     S+   L +L +G+N I+++G  
Sbjct: 808 GLHALAL----SRTLTSLDVSCIGCGDRGGLVL-----SKSRSLTLLKLGSNGIASEG-- 856

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIA--------------------DALKQNRTI 417
              + +   +SL+ ++L  N I    A  +A                     AL ++R++
Sbjct: 857 --VQILAANRSLISLDLSGNTIDVVAARALAKNPRLASLNASSCGLDDAAVSALAESRSL 914

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           T++D+  N + S G    AR L  N V+TSL++++N IG  GA AL+E            
Sbjct: 915 TSLDVSKNRLFSPG----ARALAGNRVLTSLNISHNRIGFHGAAALAE------------ 958

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
                               + +++ LD RANG+ + GA  L  + ++
Sbjct: 959 --------------------STSLTFLDARANGIGEAGALVLEANTRI 986



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 130/276 (47%), Gaps = 50/276 (18%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKG-KLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            S+R L L G +    G     +GL+   G KL  LD+ +  I  +GA    + + +  S
Sbjct: 574 PSVRHLDLSGCT----GTAVSGAGLAYLAGRKLESLDLSDTPIGDRGA----QLLASSTS 625

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L  +NL  N+I D GA   AD    N ++T+++L GN+I   GA A+ R    N+V+TSL
Sbjct: 626 LTSLNLSGNEISDAGAAAFAD----NTSLTSLNLRGNHISDAGAEALGR----NTVLTSL 677

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           D++ NPIG  G +AL+       ++ +L L    I   G E +A     N  +  LD+  
Sbjct: 678 DVSANPIGNTGVQALAS----SRSLTSLNLCSTWIEDEGVEALAS----NTVLRSLDISH 729

Query: 509 NGLRDEGAKCLAQSFKVVN-------------------EALTSIDLAFNEIRDDGAFAIA 549
           N    + A  LAQ+  + +                    +LT+++L+ N I D G  AI 
Sbjct: 730 NRFGAQFAAELAQNRTLASLKANHCSLTNNVAQQLASIRSLTALELSSNLIDDAGVQAIV 789

Query: 550 QALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
           +      + ++ SL+L+ N +   G  AL  ++ L 
Sbjct: 790 R------NASLRSLDLSQNPIGLGGLHALALSRTLT 819



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 112/269 (41%), Gaps = 76/269 (28%)

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           +++ L++LN+ G  IGD G                                A LL  N  
Sbjct: 151 ASLPLESLNVKGAQIGDHG--------------------------------ARLLAANPS 178

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L+ L    NM       + A  L E+ T+ SL L  N  G  G  ALA     ++SL  L
Sbjct: 179 LKTL----NMAIGGIGAAGAANLAESRTLMSLDLTQNKIGDKGVQALA----ASRSLTNL 230

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN------------------NSISAKGAF 377
            +    + D G+ AL     +R   L  LD+GN                  N I+ KG  
Sbjct: 231 TVSNCLVTDIGLEAL-----ARSRTLTSLDLGNLVSATYDEAEQADFDRTANDITVKGTR 285

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            + +      SL  +++  N  GD G  ++A    ++RT+T +++   N+    A A+AR
Sbjct: 286 ALVQ----SPSLTSLSVQGNLCGDAGVLELA----KSRTLTHLNVAFTNMGPVSARALAR 337

Query: 438 VLKDNSVITSLDLAYN-PIGADGAKALSE 465
               N V+TSL++ +N  IG +GA  L++
Sbjct: 338 ----NPVLTSLNVRWNYDIGTEGALELTK 362


>gi|73973032|ref|XP_852058.1| PREDICTED: T-complex-associated testis-expressed protein 1 [Canis
           lupus familiaris]
          Length = 501

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 100/187 (53%), Gaps = 2/187 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  Y    SLA  +    T+++  L  +      A  L + L  + +L EL L 
Sbjct: 256 FEWNLFLFTYQDCHSLAATIKACHTLKTFRLTRSKVDDDKARILIRSLLDHPALEELDLS 315

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G RA    LS     L VL + NN + A GA  +A  + +  +L+ +NL +N 
Sbjct: 316 HNLIGDRGARAAAKLLS--HSHLRVLTLANNQVRAPGAQSLAHALAHNTNLISLNLRLNC 373

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG D
Sbjct: 374 IEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLTVNTTLTSINLSCNHIGLD 433

Query: 459 GAKALSE 465
           G K L E
Sbjct: 434 GGKQLLE 440



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 12/215 (5%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+ T  L  + +    A  + R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYQD--CHSLAATIKACHTLKTFRLTRSKVDDDKARILIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  LDL++N IG  GA+A +++L  H ++  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PALEELDLSHNLIGDRGARAAAKLLS-HSHLRVLTLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L+LR N + DEG + LA + +  N+ LT++ L  NE+ +  A  ++Q L  N    +TS
Sbjct: 366 SLNLRLNCIEDEGGQALAHALQ-TNKCLTTLHLGGNELSEPTATLLSQVLTVN--TTLTS 422

Query: 563 LNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
           +NL+ N +       L   K L+  MS+ +  + F
Sbjct: 423 INLSCNHI------GLDGGKQLLEGMSDNKTLLEF 451



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + Q  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 256 FEWNLFLFTYQDCHSLAATIKACHTLKTFRLTRSKVDDDKARILIRSLLDHPALEELDLS 315

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +A   +L S+  L+ L L+ N +   G + L   L  N  +  L L    +
Sbjct: 316 HNLIGDRGARAAAKLL-SHSHLRVLTLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLTVNTTLTSINLSCNHIGLDG 434

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 435 GKQLLEGMSDNKTLLEFDLRLSDVAQE 461



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 30/202 (14%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  + AL+ L+LS N IGD G +    +L  ++ +  L L++  +R  GA+++A  L +N
Sbjct: 303 LLDHPALEELDLSHNLIGDRGARAAAKLL-SHSHLRVLTLANNQVRAPGAQSLAHALAHN 361

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + L  L L  N I+  G  +LA AL  N  + +LHL GN      A  L++ L  N +L 
Sbjct: 362 TNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLTVNTTLT 421

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            ++L  N IG +G + L+ G+S                               K+LL  +
Sbjct: 422 SINLSCNHIGLDGGKQLLEGMSDN-----------------------------KTLLEFD 452

Query: 394 LYMNDIGDEGAEKIADALKQNR 415
           L ++D+  E    I  AL  NR
Sbjct: 453 LRLSDVAQESEYLIGQALCANR 474


>gi|399497892|emb|CCG20274.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKRLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 145/316 (45%), Gaps = 30/316 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKRLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSID 534
           L + FK   E L S++
Sbjct: 487 LKEIFKKSPEMLASLE 502



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A         L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKRLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 5/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S ++ L+L+ N  G  G  A  K  +   +L EL L  + I  E   A+ S L    
Sbjct: 211 LEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAV-SELVPST 269

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE +K    L         +G EG   + +AL     + 
Sbjct: 270 EKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +    + + L  +  +T + L+Y  +  +GA A++  LK    ++  L+
Sbjct: 330 KLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLE 389

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I A  A  +A  +     ++ L L  N L+DEGA  +A++ +  N  L  +D++ 
Sbjct: 390 MAGNDITAEAAPAIASCIAAKRLLAKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSS 448

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKRLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAXRIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKRLLAKLS 417


>gi|156229388|emb|CAL69642.1| Ran GTPase-activating protein 2 [Solanum tuberosum]
          Length = 553

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N + DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENKLKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 30/316 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENKLKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSID 534
           L + FK   E L S++
Sbjct: 487 LKEIFKKSPEMLASLE 502



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+   +L EL L  + I  E   A +S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLLQSQTNLEELFLMNDGISQEAANA-VSELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  A  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  N  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENKLKDEGAIQIAKALEGHNH-LIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFCNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLS 417


>gi|340380815|ref|XP_003388917.1| PREDICTED: uncharacterized protein C14orf166B homolog [Amphimedon
           queenslandica]
          Length = 455

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 133/248 (53%), Gaps = 2/248 (0%)

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           S+ L+ +Y GA GA A+A  L  N ++  L+L  N +  EG  A++  L      +  LD
Sbjct: 107 SIDLSHHYVGAKGAKAIAVALISNTTVTNLNLSYNGLCPEGGVAIIDMLK-ENCYITHLD 165

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + NN I+A GA  + + + +  ++  +NL  +   D+ AE +++ +K +  +T ++L  N
Sbjct: 166 LSNNGIAATGAVMLLDILASNTTVTHLNLSGSSFDDKAAEPLSEIIKSSIRVTHLNLSHN 225

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            +       I   L ++ V+  LDL++N +   GA A+++ LK +  +  L L +   G 
Sbjct: 226 ELSEASGVLIGAALAESEVLQHLDLSWNYLRRKGAVAIAQGLKPNQMLKKLNLSYNGFGT 285

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  +AD L+ N T++ LD+  N +  +G + +A+  + + ++L S+ +  N I+  G 
Sbjct: 286 EGAVALADSLKINTTLTHLDITDNRILIDGVRAIAKVLQTI-DSLQSLKIGHNPIQIIGV 344

Query: 546 FAIAQALK 553
            A+ +ALK
Sbjct: 345 IALLEALK 352



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 1/247 (0%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+S    G +G   +A +L  N T   ++ + NG+   G  A   +L+ N  +  L+L
Sbjct: 107 SIDLSHHYVGAKGAKAIAVALISNTTVTNLNLSYNGLCPEGGVAIIDMLKENCYITHLDL 166

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S N I   G   L DIL  N  V  L LS     D+ A+ ++E++K++  +  L L++N 
Sbjct: 167 SNNGIAATGAVMLLDILASNTTVTHLNLSGSSFDDKAAEPLSEIIKSSIRVTHLNLSHNE 226

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +  +    +  AL E+  ++ L L+ NY    GA A+A+GL+ N+ L++L+L  N  G E
Sbjct: 227 LSEASGVLIGAALAESEVLQHLDLSWNYLRRKGAVAIAQGLKPNQMLKKLNLSYNGFGTE 286

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G  AL   L      L  LDI +N I   G   +A+ ++   SL  + +  N I   G  
Sbjct: 287 GAVALADSLKINT-TLTHLDITDNRILIDGVRAIAKVLQTIDSLQSLKIGHNPIQIIGVI 345

Query: 406 KIADALK 412
            + +ALK
Sbjct: 346 ALLEALK 352



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 1/224 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           +++++S      EG   + + L  N     +  + NGI A G      +L SN  +  LN
Sbjct: 134 TNLNLSYNGLCPEGGVAIIDMLKENCYITHLDLSNNGIAATGAVMLLDILASNTTVTHLN 193

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LSG+   D+  + L +I+  +  V  L LS  +L +     I   L  + +L+ L+L+ N
Sbjct: 194 LSGSSFDDKAAEPLSEIIKSSIRVTHLNLSHNELSEASGVLIGAALAESEVLQHLDLSWN 253

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +   G  ++A+ L  N  ++ L+L+ N  G  GA ALA  L+ N +L  L +  N I  
Sbjct: 254 YLRRKGAVAIAQGLKPNQMLKKLNLSYNGFGTEGAVALADSLKINTTLTHLDITDNRILI 313

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           +G+RA+   L +    L  L IG+N I   G   + E +KN  S
Sbjct: 314 DGVRAIAKVLQTID-SLQSLKIGHNPIQIIGVIALLEALKNGTS 356



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 5/252 (1%)

Query: 136 TNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           TNL   + G L  E    + +  KE    + +D+S       G   L + L  N T   +
Sbjct: 134 TNLNLSYNG-LCPEGGVAIIDMLKENCYITHLDLSNNGIAATGAVMLLDILASNTTVTHL 192

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
           + + +       +    +++S+I +  LNLS N + +     +   L ++  ++ L LS 
Sbjct: 193 NLSGSSFDDKAAEPLSEIIKSSIRVTHLNLSHNELSEASGVLIGAALAESEVLQHLDLSW 252

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             LR +GA AIA+ LK N +L+ L L+ N     G  +LA++L  N+T+  L +  N   
Sbjct: 253 NYLRRKGAVAIAQGLKPNQMLKKLNLSYNGFGTEGAVALADSLKINTTLTHLDITDNRIL 312

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G  A+AK L+   SL+ L +  N I   G+ AL+  L  + G  +V  +G + I+   
Sbjct: 313 IDGVRAIAKVLQTIDSLQSLKIGHNPIQIIGVIALLEAL--KNGTSSVKYLGLDGITV-- 368

Query: 376 AFHVAEYIKNCK 387
             +VA+ I   +
Sbjct: 369 TLNVAKIITEMQ 380


>gi|332211652|ref|XP_003254928.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14
           [Nomascus leucogenys]
          Length = 1092

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 154/319 (48%), Gaps = 6/319 (1%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L   L   N  ++ L L        G   ++ 
Sbjct: 665 LCSVLHTNEHLRELDLCHSNLDKSAMNILHHELRHPNCKLQKLLLKF-ITFPDGCQDIST 723

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  NK+L  L L G+ IGD G+++L   L   + KL  L + + +++     +++  + 
Sbjct: 724 SLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALI 783

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +   G   ++  L  N 
Sbjct: 784 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEDLSLALISNK 843

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 844 RLTHLCLADNILGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLT 903

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            LDL +N L+D G K L   F+  +  L  ++L    + +     +A  +  N ++   S
Sbjct: 904 HLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLR--S 961

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+L NN L   G   L DA
Sbjct: 962 LDLGNNDLQDDGVKILCDA 980



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 4/306 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD G+  L E+L + +   + +   +  +T          L  + +L  LNL
Sbjct: 734  LDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRSQSLIFLNL 793

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GV+ LC+ L      +ERL L S  L + G + ++  L +N  L  L L +N
Sbjct: 794  STNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEDLSLALISNKRLTHLCLADN 853

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   +++AL     T++SL L   +  +L +  L+  L  NKSL  L L  N + 
Sbjct: 854  ILGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHLDLGSNWLQ 913

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D G++ L          L  L++    ++      +A  I N  +L  ++L  ND+ D+G
Sbjct: 914  DNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQDDG 973

Query: 404  AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + DAL+  N  I  + L    + S     ++  L  N  +  ++L  N +G +G   
Sbjct: 974  VKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEGIVK 1033

Query: 463  LSEVLK 468
            L +VLK
Sbjct: 1034 LYKVLK 1039



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 149/340 (43%), Gaps = 16/340 (4%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ IGD GVK LC+ L      ++ L+L S +L      
Sbjct: 717  GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCL 776

Query: 265  AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANAL 322
             I+  L  +  L  L L+ NN++D  G   L EAL      +  L L        G   L
Sbjct: 777  NISNALIRSQSLIFLNLSTNNLLD-DGVQLLCEALRHPKCYLERLSLESCGLTEAGCEDL 835

Query: 323  AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            +  L  NK L  L L  N +GD G++ +   L   +  L  L +     ++  + +++  
Sbjct: 836  SLALISNKRLTHLCLADNILGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTS 895

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKD 441
            + + KSL  ++L  N + D G + + D  +     +  ++L G  + +     +A V+ +
Sbjct: 896  LLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILN 955

Query: 442  NSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  + SLDL  N +  DG K L + L++ + NI  L L +C + +   + ++  L  N  
Sbjct: 956  NPNLRSLDLGNNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKR 1015

Query: 501  ISILDLRANGLRDEG----------AKCLAQSFKVVNEAL 530
            +  ++L  N L  EG           KC  Q   +  EA 
Sbjct: 1016 LIKMNLTQNTLGYEGIVKLYKVLKSPKCKLQVLGLCKEAF 1055



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 168/363 (46%), Gaps = 7/363 (1%)

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLC-DILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             VL +N  L+ L+L  + +    +  L  ++   N  +++L L  +   D G + I+  L
Sbjct: 667  SVLHTNEHLRELDLCHSNLDKSAMNILHHELRHPNCKLQKLLLKFITFPD-GCQDISTSL 725

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN 329
             +N  L  L+L  + I  +G  SL EAL      +++L L            ++  L  +
Sbjct: 726  IHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRS 785

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL  L+L  N++ D+G++ L   L   K  L  L + +  ++  G   ++  + + K L
Sbjct: 786  QSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEDLSLALISNKRL 845

Query: 390  LWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              + L  N +GD G + ++DAL+  + T+ ++ L   +  S  +  ++  L  N  +T L
Sbjct: 846  THLCLADNILGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHL 905

Query: 449  DLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            DL  N +  +G K L +V +    N+  L+L  C +  +    +A ++  N  +  LDL 
Sbjct: 906  DLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLG 965

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
             N L+D+G K L  + +  N  +  + L +  +       ++ AL  N+   +  +NL  
Sbjct: 966  NNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNK--RLIKMNLTQ 1023

Query: 568  NFL 570
            N L
Sbjct: 1024 NTL 1026


>gi|51850115|dbj|BAD42399.1| leucine-rich repeat protein [Ralstonia solanacearum]
          Length = 1035

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 198/424 (46%), Gaps = 91/424 (21%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            LSG TG    E+   L   A+     +S+D+S    G+ G   LA S     +   ++ +
Sbjct: 638  LSGCTGSAVSEAG--LAYLAR--LPLASLDLSDTGIGNRGAQALAAS----ASLTSLNLS 689

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             NGI  AG +A    L  N  L  L++S NPI + G + L              L+S++L
Sbjct: 690  GNGIGTAGAEA----LGRNTVLTALDISANPIRNAGAQALA---------SSRSLTSLEL 736

Query: 259  RDEGAK-AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
            RD G +    E L  N++LR L+++ N++ D S     A AL  N T+ SL  NG     
Sbjct: 737  RDTGIEDGGIEALAANTVLRSLDISGNDLSDQS-----AAALAANRTLTSLKANG----- 786

Query: 317  LG-ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G  N +A+ L   +SLR L +  NSIGD G+  +     +R   L  L++  NSI+ +G
Sbjct: 787  CGLTNDMAQQLARIRSLRTLEVGSNSIGDAGVLTI-----ARNASLRSLNLSRNSITPQG 841

Query: 376  AFHVA--EYIKN-------C-----------KSLLWINLYMNDIGDEGAEKIADALKQNR 415
             + +A    +K+       C           ++L  + L  N I  EGA ++A     NR
Sbjct: 842  LYPLALSRTLKSLDVSRIGCGDRGALLLSGNRALTSLKLGFNRISSEGARRLA----ANR 897

Query: 416  TITTIDLGGNNIHSKGAS--------------------AIARVLKDNSVITSLDLAYNPI 455
            T+ ++DL GN I    A                     A+A  L ++  +TSLD+++N +
Sbjct: 898  TLVSLDLRGNTIDVAAARALANAEPLASLNVSDCRLDDAVACALAESRTLTSLDVSWNRL 957

Query: 456  GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
                A+AL++    +  + +L +    IG  GA+ +AD    + +++ILD RAN + + G
Sbjct: 958  SHRAARALAD----NPVLASLDISHNDIGPEGAQALAD----SASLTILDARANRIGEAG 1009

Query: 516  AKCL 519
            A+ L
Sbjct: 1010 ARLL 1013



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 172/348 (49%), Gaps = 58/348 (16%)

Query: 222 TLNLSGNPIGDEGVKCL--------CDI---LVDNAGVERL----QLSSVDLRDEGAK-A 265
           +LNLSGN IG  G + L         DI    + NAG + L     L+S++LRD G +  
Sbjct: 685 SLNLSGNGIGTAGAEALGRNTVLTALDISANPIRNAGAQALASSRSLTSLELRDTGIEDG 744

Query: 266 IAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG-ANALA 323
             E L  N++LR L+++ N++ D S     A AL  N T+ SL  NG      G  N +A
Sbjct: 745 GIEALAANTVLRSLDISGNDLSDQS-----AAALAANRTLTSLKANG-----CGLTNDMA 794

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L   +SLR L +  NSIGD G+  +     +R   L  L++  NSI+ +G + +A   
Sbjct: 795 QQLARIRSLRTLEVGSNSIGDAGVLTI-----ARNASLRSLNLSRNSITPQGLYPLA-LS 848

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
           +  KSL   ++     GD GA      L  NR +T++ LG N I S+G    AR L  N 
Sbjct: 849 RTLKSL---DVSRIGCGDRGALL----LSGNRALTSLKLGFNRISSEG----ARRLAANR 897

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
            + SLDL  N I    A+AL+        + +L +  C++     + VA  L  + T++ 
Sbjct: 898 TLVSLDLRGNTIDVAAARALANAEP----LASLNVSDCRLD----DAVACALAESRTLTS 949

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
           LD+  N L    A+ LA      N  L S+D++ N+I  +GA A+A +
Sbjct: 950 LDVSWNRLSHRAARALAD-----NPVLASLDISHNDIGPEGAQALADS 992



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 117/235 (49%), Gaps = 49/235 (20%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           +E L ++  ++ D GA+    LL  N  L+ L   +  I  SG    A  L E+ T+ SL
Sbjct: 154 LESLNVAGAEIGDGGAR----LLAANPSLKSLNAASGGISASG----ARMLAESPTLESL 205

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L  N  G  GA ALA    G++SLR L +    + D G RAL     +    L  LD+G
Sbjct: 206 DLTQNAIGDAGAQALA----GSRSLRHLAVRNGLVTDVGTRAL-----ALNPALVSLDLG 256

Query: 368 N------------------NSISAKGAFHVAEYIKNCKSLLWINLYMNDI-GDEGAEKIA 408
           N                  N+I+A+GA+ +A+     +SL  +++  ND+ GD+G     
Sbjct: 257 NLVTETGNQVEQDGYDKTANNITAQGAWALAQN----RSLKSLSVQGNDLCGDDGVR--- 309

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            AL +NRT+T++++   N+     SA A+ L DN V+TSL + +N  G D A A+
Sbjct: 310 -ALARNRTLTSLNVAFTNM----TSASAKALADNPVLTSLSVRWN-YGLDDAGAM 358



 Score = 46.6 bits (109), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 42/268 (15%)

Query: 325 GLEGNKSLRELHLHGN-SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           GL  +  L  +HL G+ ++ D  ++AL + L         LD+   + SAK +F    Y+
Sbjct: 100 GLRDHPHLESVHLKGDFTLAD--LKALPTTLRH-------LDLSECTGSAK-SFRAIAYL 149

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
                L  +N+   +IGD GA  +A     N ++ +++     I + GA    R+L ++ 
Sbjct: 150 AGLP-LESLNVAGAEIGDGGARLLA----ANPSLKSLNAASGGISASGA----RMLAESP 200

Query: 444 VITSLDLAYNPIGADGAKAL--SEVLKFHGNINTL--KLGWCQIGASGAEFVADM----L 495
            + SLDL  N IG  GA+AL  S  L+     N L   +G   +  + A    D+     
Sbjct: 201 TLESLDLTQNAIGDAGAQALAGSRSLRHLAVRNGLVTDVGTRALALNPALVSLDLGNLVT 260

Query: 496 RYNNTISI--LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI-RDDGAFAIAQAL 552
              N +     D  AN +  +GA  LAQ     N +L S+ +  N++  DDG  A+A+  
Sbjct: 261 ETGNQVEQDGYDKTANNITAQGAWALAQ-----NRSLKSLSVQGNDLCGDDGVRALAR-- 313

Query: 553 KANEDVAVTSLNLANNFLTKFGQSALTD 580
               +  +TSLN+A   +T     AL D
Sbjct: 314 ----NRTLTSLNVAFTNMTSASAKALAD 337



 Score = 45.1 bits (105), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 118/271 (43%), Gaps = 49/271 (18%)

Query: 302 STIRSLHLNGNYGGALGANALA--KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
           +T+R L L+   G A    A+A   GL     L  L++ G  IGD G R L +  S    
Sbjct: 126 TTLRHLDLSECTGSAKSFRAIAYLAGLP----LESLNVAGAEIGDGGARLLAANPS---- 177

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
            L  L+  +  ISA GA  +AE      +L  ++L  N IGD GA+    AL  +R++  
Sbjct: 178 -LKSLNAASGGISASGARMLAE----SPTLESLDLTQNAIGDAGAQ----ALAGSRSLRH 228

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           + +    +   G     R L  N  + SLDL  N +   G +   +      N  T +  
Sbjct: 229 LAVRNGLVTDVGT----RALALNPALVSLDLG-NLVTETGNQVEQDGYDKTANNITAQGA 283

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGL-RDEGAKCLAQSFKVVNEALTSIDLAFN 538
           W              L  N ++  L ++ N L  D+G + LA+     N  LTS+++AF 
Sbjct: 284 WA-------------LAQNRSLKSLSVQGNDLCGDDGVRALAR-----NRTLTSLNVAFT 325

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
            +    A A+A      ++  +TSL++  N+
Sbjct: 326 NMTSASAKALA------DNPVLTSLSVRWNY 350



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 27/187 (14%)

Query: 402 EGAEKIADALKQNRTITTIDLGG---NNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            G   +AD      ++  +DL G   + +   G + +AR+      + SLDL+   IG  
Sbjct: 618 HGPLSLADLRALPPSVRHLDLSGCTGSAVSEAGLAYLARL-----PLASLDLSDTGIGNR 672

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA+AL+          +L L    IG +GAE     L  N  ++ LD+ AN +R+ GA+ 
Sbjct: 673 GAQALAASASL----TSLNLSGNGIGTAGAE----ALGRNTVLTALDISANPIRNAGAQA 724

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           LA S      +LTS++L    I D G     +AL AN    + SL+++ N L+    +AL
Sbjct: 725 LASS-----RSLTSLELRDTGIEDGG----IEALAAN--TVLRSLDISGNDLSDQSAAAL 773

Query: 579 TDAKDLV 585
              + L 
Sbjct: 774 AANRTLT 780


>gi|410959302|ref|XP_003986250.1| PREDICTED: T-complex-associated testis-expressed protein 1 [Felis
           catus]
          Length = 504

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 101/187 (54%), Gaps = 2/187 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L 
Sbjct: 259 FEWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSKVDDDKARVLIRSLLDHPALEELDLS 318

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +GD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N 
Sbjct: 319 HNLVGDRGARAAAKLLS--HSRLRVLNLANNQVRALGAQSLAHALAHNTNLISLNLRLNC 376

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + +A AL+ NR +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG D
Sbjct: 377 IEDEGGQALAHALQTNRCLTTLHLGGNELSEPTATLLSQVLAVNTTLTSINLSCNHIGLD 436

Query: 459 GAKALSE 465
           G K L E
Sbjct: 437 GGKQLLE 443



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 107/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 275 AATIKACH-------TLKIFRLTRSKVDDDKARVLIRSLLDHPALEELDLSHNLVGDRGA 327

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +A A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 328 RAAAKLL-SHSRLRVLNLANNQVRALGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 386

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ N+ L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 387 HALQTNRCLTTLHLGGNELS-EPTATLLSQVLAVNTTLTSINLSCNHIGLDGGKQLLEGM 445

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + ++LL  +L ++D+  E    I  AL  NR
Sbjct: 446 SDNRTLLEFDLRLSDVAQESEYLIGRALCANR 477



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 2/211 (0%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R L+  L      L  LD+ +N +  +GA  
Sbjct: 271 CHSLAATIKACHTLKIFRLTRSKVDDDKARVLIRSLLDHPA-LEELDLSHNLVGDRGARA 329

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  
Sbjct: 330 AAKLLSHSR-LRVLNLANNQVRALGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHA 388

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N
Sbjct: 389 LQTNRCLTTLHLGGNELSEPTATLLSQVLAVNTTLTSINLSCNHIGLDGGKQLLEGMSDN 448

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
            T+   DLR + +  E    + ++     EA
Sbjct: 449 RTLLEFDLRLSDVAQESEYLIGRALCANREA 479



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 2/189 (1%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A  IK C +L    L  + + D+ A  +  +L  +  +  +DL  N +  +GA A A++
Sbjct: 274 LAATIKACHTLKIFRLTRSKVDDDKARVLIRSLLDHPALEELDLSHNLVGDRGARAAAKL 333

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  +S +  L+LA N + A GA++L+  L  + N+ +L L    I   G + +A  L+ N
Sbjct: 334 LS-HSRLRVLNLANNQVRALGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTN 392

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
             ++ L L  N L +  A  L+Q    VN  LTSI+L+ N I  DG   + + +  N  +
Sbjct: 393 RCLTTLHLGGNELSEPTATLLSQVL-AVNTTLTSINLSCNHIGLDGGKQLLEGMSDNRTL 451

Query: 559 AVTSLNLAN 567
               L L++
Sbjct: 452 LEFDLRLSD 460



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 259 FEWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSKVDDDKARVLIRSLLDHPALEELDLS 318

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A   +L S+  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 319 HNLVGDRGARAAAKLL-SHSRLRVLNLANNQVRALGAQSLAHALAHNTNLISLNLRLNCI 377

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 378 EDEGGQALAHALQTNRCLTTLHLGGNELSEPTATLLSQVLAVNTTLTSINLSCNHIGLDG 437

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  N++L E  L  + +  E
Sbjct: 438 GKQLLEGMSDNRTLLEFDLRLSDVAQE 464


>gi|395830995|ref|XP_003788597.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Otolemur garnettii]
          Length = 953

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 108/200 (54%), Gaps = 1/200 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   + +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLYEELTKYRIVTYLGLYNNQITDVGARYVSKILDECKG-LMYLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  I ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++AR
Sbjct: 803 CLALAVKNSKSIFDIGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++++E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTCLRIFWLTKNELNDEVAESMAEMLKVNQTLKHLWLIQNQITARGLARLADALQN 922

Query: 498 NNTISILDLRANGLRDEGAK 517
           N  I  + L  N ++ E AK
Sbjct: 923 NTGIMEICLHGNPIKPEEAK 942



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G++ L    S    +L V+ +  N I+  G   + E +   + + ++ LY N I D GA 
Sbjct: 719 GVQQLQPCFS----RLTVIRLSVNQITDSGVKVLYEELTKYRIVTYLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            ++  L + + +  + LG N I S+G   +A  +K++  I  + +  N IG +GAKA +E
Sbjct: 775 YVSKILDECKGLMYLKLGKNKITSEGGKCLALAVKNSKSIFDIGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I   G + +A  L+ N  + I  L  N L DE A+ +A+  KV
Sbjct: 835 ALRNHPSLTNLSLAFNGISTEGGKSLARALQQNTCLRIFWLTKNELNDEVAESMAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL+ N  +    L+
Sbjct: 895 -NQTLKHLWLIQNQITARGLARLADALQNNTGIMEICLH 932



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 110/246 (44%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK L + L     V  L L +  + D GA+ ++++L     L  L
Sbjct: 730 LTVIRLSVNQITDSGVKVLYEELTKYRIVTYLGLYNNQITDVGARYVSKILDECKGLMYL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I   G   LA A+  + +I  + + GN  G  GA A A+ L  + SL  L L  
Sbjct: 790 KLGKNKITSEGGKCLALAVKNSKSIFDIGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAF 849

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I  EG ++L   L                               C  + W+    N++
Sbjct: 850 NGISTEGGKSLARALQQ---------------------------NTCLRIFWLT--KNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I ++G + +A  L++N+ I  + L  NPI  + 
Sbjct: 881 NDEVAESMAEMLKVNQTLKHLWLIQNQITARGLARLADALQNNTGIMEICLHGNPIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVFED 946



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 3/190 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           I L +N I D G + + + L + R +T + L  N I   GA  ++++L +   +  L L 
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYRIVTYLGLYNNQITDVGARYVSKILDECKGLMYLKLG 792

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I ++G K L+  +K   +I  + +   QIG  GA+  A+ LR + +++ L L  NG+
Sbjct: 793 KNKITSEGGKCLALAVKNSKSIFDIGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGI 852

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
             EG K LA++ +  N  L    L  NE+ D+ A ++A+ LK N+   +  L L  N +T
Sbjct: 853 STEGGKSLARALQQ-NTCLRIFWLTKNELNDEVAESMAEMLKVNQ--TLKHLWLIQNQIT 909

Query: 572 KFGQSALTDA 581
             G + L DA
Sbjct: 910 ARGLARLADA 919



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 93/194 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E   + R  + + +      D G  ++++ L   +    +    N IT+ G K   
Sbjct: 746 KVLYEELTKYRIVTYLGLYNNQITDVGARYVSKILDECKGLMYLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN IGDEG K   + L ++  +  L L+   +  EG K++A  L+
Sbjct: 806 LAVKNSKSIFDIGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ LR+  L  N ++     S+AE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTCLRIFWLTKNELNDEVAESMAEMLKVNQTLKHLWLIQNQITARGLARLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ LHGN I  E
Sbjct: 926 IMEICLHGNPIKPE 939



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 91/202 (45%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G +    +L     L  L L 
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYRIVTYLGLYNNQITDVGARYVSKILDECKGLMYLKLG 792

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 793 KNKITSEGGKCLALAVKNSKSIFDIGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGI 852

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA AL +N+ +R   L  N      A ++A+ L+ N++L+ L L  N I   G
Sbjct: 853 STEGGKSLARALQQNTCLRIFWLTKNELNDEVAESMAEMLKVNQTLKHLWLIQNQITARG 912

Query: 347 IRALMSGLSSRKGKLAVLDIGN 368
           +  L   L +  G + +   GN
Sbjct: 913 LARLADALQNNTGIMEICLHGN 934



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K L E L  +  +  L L   QI   GA +V+ +L     + 
Sbjct: 728 SRLTVIRLSVNQITDSGVKVLYEELTKYRIVTYLGLYNNQITDVGARYVSKILDECKGLM 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG KCLA + K  ++++  I +  N+I D+GA A A+AL+ +   ++T+
Sbjct: 788 YLKLGKNKITSEGGKCLALAVKN-SKSIFDIGMWGNQIGDEGAKAFAEALRNHP--SLTN 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA N ++  G  +L  A
Sbjct: 845 LSLAFNGISTEGGKSLARA 863



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 28/55 (50%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
           +AE L  NQT + +    N ITA G+      LQ+N  +  + L GNPI  E  K
Sbjct: 888 MAEMLKVNQTLKHLWLIQNQITARGLARLADALQNNTGIMEICLHGNPIKPEEAK 942


>gi|399497914|emb|CCG20285.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSENALGEKGVRAFGKLLQSQNNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSENALGEKGVRAFGKLLQSQNNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ LK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSENALGEKGVRAFGKLLQSQNN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 5/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S ++ L+L+ N  G  G  A  K L+   +L EL L  + I  E   A+ S L    
Sbjct: 211 LEGSNLKFLNLSENALGEKGVRAFGKLLQSQNNLEELFLMNDGISQEAANAV-SELVPST 269

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE +K    L         +G EG   + +AL     + 
Sbjct: 270 EKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +    + + L  +  +T + L+Y  +  +GA A++  LK    ++  L+
Sbjct: 330 KLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLE 389

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I A  A  +A  +     ++ L L  N L+DEGA  +A++ +  N  L  +D++ 
Sbjct: 390 MAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSS 448

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSENALGEKGVRAFGKLLQSQNNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANTLKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIYAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSENALGEKGVRAFGKLLQSQNNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA  LK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANTLK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLS 417


>gi|399498114|emb|CCG20385.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 147/316 (46%), Gaps = 30/316 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSID 534
           L + FK   E L S++
Sbjct: 487 LKEIFKKSPEMLASLE 502



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E +  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEASSAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 145/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K L+   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLLQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  +  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|399498014|emb|CCG20335.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKALHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIATKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+ L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKAL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIATKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKALHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIATKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIATKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 118/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     + +L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKALHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AIA ALK +   ++  L +A N +T
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|66799973|ref|XP_628912.1| hypothetical protein DDB_G0293858 [Dictyostelium discoideum AX4]
 gi|60462274|gb|EAL60500.1| hypothetical protein DDB_G0293858 [Dictyostelium discoideum AX4]
          Length = 800

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 196/432 (45%), Gaps = 73/432 (16%)

Query: 191 TAEEVSFAA--NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           T  E+S +     IT  G+  F   L  N +LK+LNLS N I ++ V  +   L  N  +
Sbjct: 367 TPTEISQSTITTAITKIGL-TFKNSLGKNKSLKSLNLSRNLIDNQAVGYIAFGLSLNRSI 425

Query: 249 ERLQLSSVDLRDEGAKAIAELL--KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
             + LS   + D+GAK +++ +    N+++  L L++N I+ SG +S ++ ++ N T+  
Sbjct: 426 LNIDLSCNRIGDQGAKLLSKSIAYNENTMITTLNLSSNCIEDSGASSFSDIIINNKTLTQ 485

Query: 307 LHLNGNYGGALGANALAKGLE-----------------GNKSLRELHLHGNSIGDEGIRA 349
           L L+ N+  + G   L+K  E                     +  +    N+I   G + 
Sbjct: 486 LDLSINWINSNGIIQLSKSFEVLSSSSSSSSSSSSSSNCVSPITSIDFSCNTICHRGAKY 545

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE---YIKNCKSLLWINLYMNDIGDEGAEK 406
           + S L  +   +  L++ +N++ A GA  +A+    I +  +L  ++L  N +G+ G   
Sbjct: 546 IGSFL--KNSNIKYLNLFSNNLEALGAIKLAKSFSLINDNINLTQLDLSSNSLGNYGVSV 603

Query: 407 IADALKQNRTITTIDLG------------------------------------------- 423
           +A+ L +N+TI +I L                                            
Sbjct: 604 LANQLIKNKTIKSISLSQSLITSIESSHIQSTTTTTTNPKEASPPPTTTTTTTTTTTTTD 663

Query: 424 -GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N + S G  ++ +++K+N+VI  +DL+YN IGA GAK +S  LK +  I  L L    
Sbjct: 664 DKNIVVSDGVLSLVKLIKENNVIEFIDLSYNSIGAIGAKEISFALKSNKTITNLDLSCNS 723

Query: 483 IGASGAEFVAD-MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           IG  GA  +A+ +  +NN +S L L  N +   GAK +  +  + N  L +I+L  N I 
Sbjct: 724 IGDIGATSIANQVFPFNNILSRLSLYNNKISSVGAKSIVDNL-IKNHTLFTINLLANNID 782

Query: 542 DDGAFAIAQALK 553
           ++    I + L+
Sbjct: 783 NELLIPITKRLE 794



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 176/426 (41%), Gaps = 103/426 (24%)

Query: 188 YNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAG 247
           YNQ + E          + I   DG L SN ++++LNLS N I   G   +   L  N  
Sbjct: 247 YNQLSNE----------SAIILADG-LSSNKSIQSLNLSFNDIKQFGSVAIAKALSINNS 295

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN------------------------ 283
           +  LQ S   L  EG  A AE++  N  L  L L+N                        
Sbjct: 296 ITSLQYSCNSLFQEGTLAFAEMISLNQSLTDLNLSNCKLSLSPSSSSSTSSSSSPESSSP 355

Query: 284 -----NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
                 +I  +  T ++++ +  +  +         G    N+L K    NKSL+ L+L 
Sbjct: 356 ESSSIIIIPTATPTEISQSTITTAITKI--------GLTFKNSLGK----NKSLKSLNLS 403

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW--INLYM 396
            N I ++ +  +  GLS  +  L + D+  N I  +GA  +++ I   ++ +   +NL  
Sbjct: 404 RNLIDNQAVGYIAFGLSLNRSILNI-DLSCNRIGDQGAKLLSKSIAYNENTMITTLNLSS 462

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK---------------D 441
           N I D GA   +D +  N+T+T +DL  N I+S G   +++  +                
Sbjct: 463 NCIEDSGASSFSDIIINNKTLTQLDLSINWINSNGIIQLSKSFEVLSSSSSSSSSSSSSS 522

Query: 442 NSV--ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           N V  ITS+D + N I   GAK +   LK                             N+
Sbjct: 523 NCVSPITSIDFSCNTICHRGAKYIGSFLK-----------------------------NS 553

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNE--ALTSIDLAFNEIRDDGAFAIAQALKANED 557
            I  L+L +N L   GA  LA+SF ++N+   LT +DL+ N + + G   +A  L  N+ 
Sbjct: 554 NIKYLNLFSNNLEALGAIKLAKSFSLINDNINLTQLDLSSNSLGNYGVSVLANQLIKNKT 613

Query: 558 VAVTSL 563
           +   SL
Sbjct: 614 IKSISL 619



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 48/230 (20%)

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N + +E A  +AD L  N++I +++L  N+I   G+ AIA+ L  N+ ITSL  + N + 
Sbjct: 248 NQLSNESAIILADGLSSNKSIQSLNLSFNDIKQFGSVAIAKALSINNSITSLQYSCNSLF 307

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQ---------------------------------- 482
            +G  A +E++  + ++  L L  C+                                  
Sbjct: 308 QEGTLAFAEMISLNQSLTDLNLSNCKLSLSPSSSSSTSSSSSPESSSPESSSIIIIPTAT 367

Query: 483 ------------IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEAL 530
                       I   G  F  + L  N ++  L+L  N + ++    +A    + N ++
Sbjct: 368 PTEISQSTITTAITKIGLTF-KNSLGKNKSLKSLNLSRNLIDNQAVGYIAFGLSL-NRSI 425

Query: 531 TSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
            +IDL+ N I D GA  +++++  NE+  +T+LNL++N +   G S+ +D
Sbjct: 426 LNIDLSCNRIGDQGAKLLSKSIAYNENTMITTLNLSSNCIEDSGASSFSD 475


>gi|327260015|ref|XP_003214831.1| PREDICTED: ribonuclease inhibitor-like [Anolis carolinensis]
          Length = 456

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 171/402 (42%), Gaps = 33/402 (8%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD-ILVDNAGVERLQLSSVDLRD 260
           ++    K    VL  N  L  L L+ N +GD G+  LC  +L  +  +++L L + +L +
Sbjct: 35  LSTKHFKDISTVLTKNQVLTELKLNNNEVGDSGMDVLCKGLLHPSCKLQKLWLQNCNLTE 94

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGA 319
              + +  +L + + L  L L +N +  SG   L + LL+ N  + SL L+     A   
Sbjct: 95  ACCEHLRSVLSSKTSLTELHLGDNTLGESGAKVLCQGLLDPNCKLESLQLDYCELSAANV 154

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL+  L    SL+EL L  NS GD  ++ L  G+   K  L  L + N   +A+    +
Sbjct: 155 EALSSALRTKPSLKELSLCNNSFGDAAVKLLCQGVQDSKCNLQTLRLENCDFTAESCGDL 214

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIAD-ALKQNRTITTIDLGGNNIHSKGASAIARV 438
              +    SL  + +  N IGD G   +   AL  N  +  + L    I + G   ++ +
Sbjct: 215 GTILSTKPSLTELCIGENKIGDRGVALLCQGALNPNCHVQKLWLWECGITAHGCKDLSNL 274

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRY 497
           L +   I  + L  N +   G   LS+ LK     + ++ L  C +  +  + ++  L  
Sbjct: 275 LGNKETIKEISLIGNDVKDQGMDFLSQGLKNPKCKLQSIWLRECGLTGTCCKSLSQALST 334

Query: 498 NNTISILDLRANGLRDEGA----------KCLAQSFKVVNEALTS--------------- 532
           N T+  L +  N L D G            C  QS  V    LT+               
Sbjct: 335 NGTLKELHIGGNQLDDAGVVQICEGVLSPTCNLQSLSVGQSKLTAACCDKLAEVIAGKPS 394

Query: 533 ---IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
              +D++++ I D+GA  + +A+K N +  +  L L + F T
Sbjct: 395 LQELDVSYSHIGDEGAMKLCEAVK-NPNCHLKYLILYDTFWT 435



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 169/371 (45%), Gaps = 5/371 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAAN-GITAAGIKAFDGVLQSNIAL 220
           +  + + ++    GD G+  L + L +     +  +  N  +T A  +    VL S  +L
Sbjct: 51  QVLTELKLNNNEVGDSGMDVLCKGLLHPSCKLQKLWLQNCNLTEACCEHLRSVLSSKTSL 110

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L+L  N +G+ G K LC  L+D N  +E LQL   +L     +A++  L+    L+ L
Sbjct: 111 TELHLGDNTLGESGAKVLCQGLLDPNCKLESLQLDYCELSAANVEALSSALRTKPSLKEL 170

Query: 280 ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            L NN    +    L + + ++   +++L L      A     L   L    SL EL + 
Sbjct: 171 SLCNNSFGDAAVKLLCQGVQDSKCNLQTLRLENCDFTAESCGDLGTILSTKPSLTELCIG 230

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G+  L  G  +    +  L +    I+A G   ++  + N +++  I+L  ND
Sbjct: 231 ENKIGDRGVALLCQGALNPNCHVQKLWLWECGITAHGCKDLSNLLGNKETIKEISLIGND 290

Query: 399 IGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           + D+G + ++  LK  +  + +I L    +      ++++ L  N  +  L +  N +  
Sbjct: 291 VKDQGMDFLSQGLKNPKCKLQSIWLRECGLTGTCCKSLSQALSTNGTLKELHIGGNQLDD 350

Query: 458 DGAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            G   + E VL    N+ +L +G  ++ A+  + +A+++    ++  LD+  + + DEGA
Sbjct: 351 AGVVQICEGVLSPTCNLQSLSVGQSKLTAACCDKLAEVIAGKPSLQELDVSYSHIGDEGA 410

Query: 517 KCLAQSFKVVN 527
             L ++ K  N
Sbjct: 411 MKLCEAVKNPN 421



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 131/319 (41%), Gaps = 31/319 (9%)

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG-- 325
           EL+ +    + + L++  +    F  ++  L +N  +  L LN N  G  G + L KG  
Sbjct: 17  ELVSSLHQYKTIRLDDCSLSTKHFKDISTVLTKNQVLTELKLNNNEVGDSGMDVLCKGLL 76

Query: 326 ---------------------------LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
                                      L    SL ELHL  N++G+ G + L  GL    
Sbjct: 77  HPSCKLQKLWLQNCNLTEACCEHLRSVLSSKTSLTELHLGDNTLGESGAKVLCQGLLDPN 136

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-I 417
            KL  L +    +SA     ++  ++   SL  ++L  N  GD   + +   ++ ++  +
Sbjct: 137 CKLESLQLDYCELSAANVEALSSALRTKPSLKELSLCNNSFGDAAVKLLCQGVQDSKCNL 196

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTL 476
            T+ L   +  ++    +  +L     +T L +  N IG  G   L +  L  + ++  L
Sbjct: 197 QTLRLENCDFTAESCGDLGTILSTKPSLTELCIGENKIGDRGVALLCQGALNPNCHVQKL 256

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L  C I A G + ++++L    TI  + L  N ++D+G   L+Q  K     L SI L 
Sbjct: 257 WLWECGITAHGCKDLSNLLGNKETIKEISLIGNDVKDQGMDFLSQGLKNPKCKLQSIWLR 316

Query: 537 FNEIRDDGAFAIAQALKAN 555
              +      +++QAL  N
Sbjct: 317 ECGLTGTCCKSLSQALSTN 335


>gi|301757308|ref|XP_002914541.1| PREDICTED: t-complex-associated testis-expressed protein 1-like
           [Ailuropoda melanoleuca]
 gi|281345698|gb|EFB21282.1| hypothetical protein PANDA_002398 [Ailuropoda melanoleuca]
          Length = 499

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 99/187 (52%), Gaps = 2/187 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L 
Sbjct: 254 FEWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 313

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G RA    LS     L VLD+ NN + A GA  +A  + +  +L  +NL +N 
Sbjct: 314 HNLIGDRGARAAAKLLS--HSHLRVLDLANNQVRAPGAQSLAHALAHNTNLTSLNLRLNC 371

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG D
Sbjct: 372 IEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLTVNTTLTSINLSCNHIGLD 431

Query: 459 GAKALSE 465
           G K L E
Sbjct: 432 GGKQLLE 438



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 108/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 270 AATIKACH-------TLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGA 322

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +A A+LL ++S LRVL+L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 323 RAAAKLL-SHSHLRVLDLANNQVRAPGAQSLAHALAHNTNLTSLNLRLNCIEDEGGQALA 381

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 382 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLTVNTTLTSINLSCNHIGLDGGKQLLEGM 440

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 441 SDNKTLLEFDLRLSDVAQESEYLIGQALCANR 472



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 2/189 (1%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A  IK C +L    L  + + D+ A  +  +L  +  +  +DL  N I  +GA A A++
Sbjct: 269 LAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKL 328

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  +S +  LDLA N + A GA++L+  L  + N+ +L L    I   G + +A  L+ N
Sbjct: 329 LS-HSHLRVLDLANNQVRAPGAQSLAHALAHNTNLTSLNLRLNCIEDEGGQALAHALQTN 387

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
             ++ L L  N L +  A  L+Q    VN  LTSI+L+ N I  DG   + + +  N+ +
Sbjct: 388 KCLTTLHLGGNELSEPTATLLSQVL-TVNTTLTSINLSCNHIGLDGGKQLLEGMSDNKTL 446

Query: 559 AVTSLNLAN 567
               L L++
Sbjct: 447 LEFDLRLSD 455



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 254 FEWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 313

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +A   +L S+  L+ L+L+ N +   G + L   L  N  +  L L    +
Sbjct: 314 HNLIGDRGARAAAKLL-SHSHLRVLDLANNQVRAPGAQSLAHALAHNTNLTSLNLRLNCI 372

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 373 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLTVNTTLTSINLSCNHIGLDG 432

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 433 GKQLLEGMSDNKTLLEFDLRLSDVAQE 459



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 34/190 (17%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+    L  + +    A  + R L D+
Sbjct: 247 VKDCGMNFEWNLFLFTYRD--CHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDH 304

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  LDL++N IG  GA+A +++L                              ++ + 
Sbjct: 305 PALEELDLSHNLIGDRGARAAAKLLS-----------------------------HSHLR 335

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
           +LDL  N +R  GA+ LA +    N  LTS++L  N I D+G  A+A AL+ N+   +T+
Sbjct: 336 VLDLANNQVRAPGAQSLAHAL-AHNTNLTSLNLRLNCIEDEGGQALAHALQTNK--CLTT 392

Query: 563 LNLANNFLTK 572
           L+L  N L++
Sbjct: 393 LHLGGNELSE 402


>gi|166796047|ref|NP_001107749.1| nucleotide-binding oligomerization domain-containing protein 1 [Sus
           scrofa]
 gi|164562263|gb|ABY61043.1| nucleotide-binding oligomerization domain containing 1 [Sus scrofa]
          Length = 953

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   + E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + + +  + LG N I S+G   +AR +K++  I  + +  N IG +GAKA +E
Sbjct: 775 YVARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I   G + +A  L+ N ++ I  L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTNLSLAFNGISTEGGKGLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL+ N  +    LN
Sbjct: 895 -NQTLKHLWLIQNQITARGTARLADALQNNTGIMEICLN 932



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLYEELTKYKIVTFLGLYNNQITDVGARYVARILDECKG-LKCLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN +S+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G   +A+
Sbjct: 803 CLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKGLAQ 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITARGTARLADALQN 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I  + L  N ++ E AK      ++V
Sbjct: 923 NTGIMEICLNGNLIKPEEAKVFEDEKRIV 951



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 2/211 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L  N I D G++ L   L+  K  +  L + NN I+  GA +VA  +  CK L  + L
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYK-IVTFLGLYNNQITDVGARYVARILDECKGLKCLKL 791

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+K +R+I  + + GN I  +GA A A  L+++  +T+L LA+N 
Sbjct: 792 GKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNG 851

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           I  +G K L++ L+ + ++    L   ++    AE +A+ML+ N T+  L L  N +   
Sbjct: 852 ISTEGGKGLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAR 911

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
           G   LA + +  N  +  I L  N I+ + A
Sbjct: 912 GTARLADALQ-NNTGIMEICLNGNLIKPEEA 941



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 113/246 (45%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK L + L     V  L L +  + D GA+ +A +L     L+ L
Sbjct: 730 LTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGARYVARILDECKGLKCL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I                               G   LA+ ++ ++S+ E+ + G
Sbjct: 790 KLGKNKITSE----------------------------GGKCLARAVKNSRSIFEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG +A    L +    L  L +  N IS +G   +A+ ++   SL    L  N++
Sbjct: 822 NQIGDEGAKAFAEALRNHPS-LTNLSLAFNGISTEGGKGLAQALQQNASLRIFWLTQNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I ++G + +A  L++N+ I  + L  N I  + 
Sbjct: 881 DDEVAESLAEMLKVNQTLKHLWLIQNQITARGTARLADALQNNTGIMEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVFED 946



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 92/202 (45%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G +    +L     LK L L 
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGARYVARILDECKGLKCLKLG 792

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 793 KNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGI 852

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   LA+AL +N+++R   L  N      A +LA+ L+ N++L+ L L  N I   G
Sbjct: 853 STEGGKGLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITARG 912

Query: 347 IRALMSGLSSRKGKLAVLDIGN 368
              L   L +  G + +   GN
Sbjct: 913 TARLADALQNNTGIMEICLNGN 934



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 85/170 (50%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A  L   +  + +    N IT+ G K     ++++ ++  + + GN IGDEG 
Sbjct: 770 DVGARYVARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGA 829

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L ++  +  L L+   +  EG K +A+ L+ N+ LR+  L  N +D     SLA
Sbjct: 830 KAFAEALRNHPSLTNLSLAFNGISTEGGKGLAQALQQNASLRIFWLTQNELDDEVAESLA 889

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T++ L L  N   A G   LA  L+ N  + E+ L+GN I  E
Sbjct: 890 EMLKVNQTLKHLWLIQNQITARGTARLADALQNNTGIMEICLNGNLIKPE 939



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 77/153 (50%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +    + +       EG   LA ++  +++  EV    N I   G KAF   L+++ +
Sbjct: 782 ECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L+L+ N I  EG K L   L  NA +    L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTNLSLAFNGISTEGGKGLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 902 WLIQNQITARGTARLADALQNNTGIMEICLNGN 934



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K L E L  +  +  L L   QI   GA +VA +L     + 
Sbjct: 728 SRLTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGARYVARILDECKGLK 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG KCLA++ K  + ++  + +  N+I D+GA A A+AL+ +   ++T+
Sbjct: 788 CLKLGKNKITSEGGKCLARAVKN-SRSIFEVGMWGNQIGDEGAKAFAEALRNHP--SLTN 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA N ++  G   L  A
Sbjct: 845 LSLAFNGISTEGGKGLAQA 863


>gi|440901347|gb|ELR52310.1| Nucleotide-binding oligomerization domain-containing protein 1 [Bos
           grunniens mutus]
          Length = 954

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   + E +   K L ++ LY N I D GA 
Sbjct: 720 GVRELQPCFS----RLTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGAR 775

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA  L + + +T + LG N I S+G  ++A  +K++  I  + +  N IG +GAKA +E
Sbjct: 776 YIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAE 835

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I   G + +A  L+ N ++ I  L  N L DE A+  A+  K 
Sbjct: 836 ALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLK- 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           VN+ L  + L  N+I   G   +A+AL+ N  +    LN
Sbjct: 895 VNQTLKHLWLIQNQITAKGIAQLAEALQKNTGIMEICLN 933



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K L  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 745 GVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKG-LTHLKLGKNKITSEGGK 803

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++A 
Sbjct: 804 SLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAW 863

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++ +E+LK +  +  L L   QI A G   +A+ L+ 
Sbjct: 864 ALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQK 923

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I  + L  N ++ E AK      ++V
Sbjct: 924 NTGIMEICLNGNLIKPEEAKVFEDEKRIV 952



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 2/211 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L  N I D G++ L   L+  K  L  L + NN I+  GA ++A  +  CK L  + L
Sbjct: 734 IRLSVNQITDSGVKVLYEELTKYK-ILTFLGLYNNQITDVGARYIARILDECKGLTHLKL 792

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+K +++I  + + GN I  +GA A A  L+++  +T+L LA+N 
Sbjct: 793 GKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNG 852

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           I  +G K+L+  L+ + ++    L   ++    AE  A+ML+ N T+  L L  N +  +
Sbjct: 853 ISTEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAK 912

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
           G   LA++ +  N  +  I L  N I+ + A
Sbjct: 913 GIAQLAEALQ-KNTGIMEICLNGNLIKPEEA 942



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A  L   +    +    N IT+ G K+    ++++ ++  + + GN IGDEG 
Sbjct: 771 DVGARYIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGA 830

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L ++  +  L L+   +  EG K++A  L+ N+ LR+  L  N +D     S A
Sbjct: 831 KAFAEALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFA 890

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T++ L L  N   A G   LA+ L+ N  + E+ L+GN I  E
Sbjct: 891 EMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKNTGIMEICLNGNLIKPE 940



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 90/202 (44%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G +    +L     L  L L 
Sbjct: 734 IRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLG 793

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG K L   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 794 KNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGI 853

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA AL +N+++R   L  N      A + A+ L+ N++L+ L L  N I  +G
Sbjct: 854 STEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKG 913

Query: 347 IRALMSGLSSRKGKLAVLDIGN 368
           I  L   L    G + +   GN
Sbjct: 914 IAQLAEALQKNTGIMEICLNGN 935



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  ++L    K  ++   V M G   GDEG    AE+L  + +   +S A NGI+ 
Sbjct: 796 KITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGIST 855

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+   L+ N                            +L DE A+
Sbjct: 856 EGGKSLAWALQQNASLRIFWLTKN----------------------------ELDDEVAE 887

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           + AE+LK N  L+ L L  N I   G   LAEAL +N+ I  + LNGN
Sbjct: 888 SFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKNTGIMEICLNGN 935


>gi|156353814|ref|XP_001623106.1| predicted protein [Nematostella vectensis]
 gi|156209767|gb|EDO31006.1| predicted protein [Nematostella vectensis]
          Length = 550

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 2/270 (0%)

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           ++E+ T +++ +  +  G  GA A+   L  N ++  L++    IG +G    ++ L   
Sbjct: 145 IMEHITTKAVDIKHHGLGPSGAKAIVTALMNNTTIASLNIRDCGIGSDG-GVEVAKLLKE 203

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
              +  LD+  N +   GA   AE I++   +  +NL  N+  +  A + A+AL+ N T+
Sbjct: 204 NCYITELDVAQNKLKTSGACAFAEVIQDNNVVTSLNLAWNEFNNHDAARFAEALRTNHTL 263

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
             +DL  N    +    +   +  N  +  L+L++N +   GA A ++ L+ + ++  L 
Sbjct: 264 KRLDLSRNKFEEQAGIYLGPAIDANDGLEYLNLSWNHLRGPGAIAFAKGLRANCSLQVLD 323

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           L W      GA  V + L+ NNT+  LDL  N +  +GA  LA+  K +N  L  + +  
Sbjct: 324 LSWNGFADEGAHAVGESLKDNNTLLELDLSYNRITCKGALALAEGLK-INNTLKVLKIGM 382

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           N I++ GA A+  A++ N + A+  + L N
Sbjct: 383 NMIQNKGANALLDAMRNNAECAMEKVYLNN 412



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 119/258 (46%), Gaps = 1/258 (0%)

Query: 157 FAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS 216
           F  E     +VD+     G  G   +  +L  N T   ++    GI + G      +L+ 
Sbjct: 144 FIMEHITTKAVDIKHHGLGPSGAKAIVTALMNNTTIASLNIRDCGIGSDGGVEVAKLLKE 203

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N  +  L+++ N +   G     +++ DN  V  L L+  +  +  A   AE L+ N  L
Sbjct: 204 NCYITELDVAQNKLKTSGACAFAEVIQDNNVVTSLNLAWNEFNNHDAARFAEALRTNHTL 263

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           + L+L+ N  +      L  A+  N  +  L+L+ N+    GA A AKGL  N SL+ L 
Sbjct: 264 KRLDLSRNKFEEQAGIYLGPAIDANDGLEYLNLSWNHLRGPGAIAFAKGLRANCSLQVLD 323

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L  N   DEG  A+   L      L  LD+  N I+ KGA  +AE +K   +L  + + M
Sbjct: 324 LSWNGFADEGAHAVGESLKD-NNTLLELDLSYNRITCKGALALAEGLKINNTLKVLKIGM 382

Query: 397 NDIGDEGAEKIADALKQN 414
           N I ++GA  + DA++ N
Sbjct: 383 NMIQNKGANALLDAMRNN 400


>gi|399497870|emb|CCG20263.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG   + + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIVIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIVIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIVIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 5/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S ++ L+L+ N  G  G  A  K L+   +L EL L  + I  E   A+ S L    
Sbjct: 211 LEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAV-SELVPST 269

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE +K    L         +G EG   + +AL     + 
Sbjct: 270 EKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +    + + L  +  +T + L+Y  +  +GA  ++  LK    ++  L+
Sbjct: 330 KLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIVIANALKDSAPSLAVLE 389

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I A  A  +A  +     ++ L L  N L+DEGA  +A++ +  N  L  +D++ 
Sbjct: 390 MAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSS 448

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 142/309 (45%), Gaps = 11/309 (3%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN----G 311
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           + G  + ANAL    +   SL  L + GN I  E   A+ S +++++  LA L +G N +
Sbjct: 368 DEGAIVIANALK---DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQ-LLAKLSLGENEL 423

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
             +GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G
Sbjct: 424 KDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEG 483

Query: 432 ASAIARVLK 440
              +  + K
Sbjct: 484 VDELKEIFK 492



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA  IA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIVIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA  IA ALK +   ++  L +A N +T     A+     AK L+ ++S
Sbjct: 369 EGAIVIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLS 417


>gi|119891078|ref|XP_598513.3| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Bos taurus]
          Length = 954

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   + E +   K L ++ LY N I D GA 
Sbjct: 720 GVRELQPCFS----RLTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGAR 775

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA  L + + +T + LG N I S+G  ++A  +K++  I  + +  N IG +GAKA +E
Sbjct: 776 YIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAE 835

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I   G + +A  L+ N ++ I  L  N L DE A+  A+  K 
Sbjct: 836 ALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLK- 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           VN+ L  + L  N+I   G   +A+AL+ N  +    LN
Sbjct: 895 VNQTLKHLWLIQNQITAKGIAQLAEALQKNTGIMEICLN 933



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K L  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 745 GVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKG-LTHLKLGKNKITSEGGK 803

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++A 
Sbjct: 804 SLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAW 863

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++ +E+LK +  +  L L   QI A G   +A+ L+ 
Sbjct: 864 ALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQK 923

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I  + L  N ++ E AK      +++
Sbjct: 924 NTGIMEICLNGNLIKPEEAKVFEDEKRII 952



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 2/206 (0%)

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I D G++ L   L+  K  L  L + NN I+  GA ++A  +  CK L  + L  N I
Sbjct: 739 NQITDSGVKVLYEELTKYK-ILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGKNKI 797

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             EG + +A A+K +++I  + + GN I  +GA A A  L+++  +T+L LA+N I  +G
Sbjct: 798 TSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEG 857

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
            K+L+  L+ + ++    L   ++    AE  A+ML+ N T+  L L  N +  +G   L
Sbjct: 858 GKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKGIAQL 917

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGA 545
           A++ +  N  +  I L  N I+ + A
Sbjct: 918 AEALQ-KNTGIMEICLNGNLIKPEEA 942



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 93/194 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E   + +  + + +      D G  ++A  L   +    +    N IT+ G K+  
Sbjct: 747 KVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGKNKITSEGGKSLA 806

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN IGDEG K   + L ++  +  L L+   +  EG K++A  L+
Sbjct: 807 LAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAWALQ 866

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ LR+  L  N +D     S AE L  N T++ L L  N   A G   LA+ L+ N  
Sbjct: 867 QNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKNTG 926

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 927 IMEICLNGNLIKPE 940



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 90/202 (44%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G +    +L     L  L L 
Sbjct: 734 IRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLG 793

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG K L   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 794 KNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGI 853

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA AL +N+++R   L  N      A + A+ L+ N++L+ L L  N I  +G
Sbjct: 854 STEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKG 913

Query: 347 IRALMSGLSSRKGKLAVLDIGN 368
           I  L   L    G + +   GN
Sbjct: 914 IAQLAEALQKNTGIMEICLNGN 935



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  ++L    K  ++   V M G   GDEG    AE+L  + +   +S A NGI+ 
Sbjct: 796 KITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGIST 855

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+   L+ N                            +L DE A+
Sbjct: 856 EGGKSLAWALQQNASLRIFWLTKN----------------------------ELDDEVAE 887

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           + AE+LK N  L+ L L  N I   G   LAEAL +N+ I  + LNGN
Sbjct: 888 SFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKNTGIMEICLNGN 935


>gi|395815169|ref|XP_003781107.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14 [Otolemur
            garnettii]
          Length = 1095

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 154/308 (50%), Gaps = 8/308 (2%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGIT-AAGIKAFDGVLQSNIALKTLN 224
            +D+ G + GD G+  L E+L + +   +++S  +  +T    +  F+ +++S  +L  LN
Sbjct: 736  LDLKGNDIGDNGVKLLCEALKHPECKLQKLSLESCNLTEVCCLDIFNALIRSQ-SLIFLN 794

Query: 225  LSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            LS N + D+GVK LC+ L      +ERL L S  L ++  + ++  L +N  L  L L N
Sbjct: 795  LSTNNLLDDGVKLLCEALRYPKCYLERLSLESCGLTEDVCEDLSLALISNKRLTHLCLAN 854

Query: 284  NMIDYSGFTSLAEALLEN--STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            N +  SG   +++ +L+N   T++SL L   +   L +  L+  L  NKSL  L L  N 
Sbjct: 855  NALGDSGIKLMSD-VLQNPCCTLQSLVLRHCHFTLLSSEYLSTSLLHNKSLTHLDLGSNR 913

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            + D+G + L          L  L++    +++     +A  + +  +L  ++L  ND+ D
Sbjct: 914  LQDDGAKLLCDAFRHPSCNLRDLELMGCVLTSACCLDLASVVLSNPNLWSLDLGKNDLQD 973

Query: 402  EGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            EG + + DAL+  + +I  + L    + S     ++  L  N  +  ++LA N +  +G 
Sbjct: 974  EGVKILCDALRHPDCSIQRLGLECCGLTSLSCEDLSSTLSSNQRLKKMNLAQNDLRCEGI 1033

Query: 461  KALSEVLK 468
            + L + LK
Sbjct: 1034 RKLCQALK 1041



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 158/355 (44%), Gaps = 32/355 (9%)

Query: 256  VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYG 314
            VD      + +  +L  N  LR LEL ++ +D        + L      ++ L L+    
Sbjct: 656  VDRITHYWQELCSVLHTNEDLRELELCHSNLDKLAMKIFNQELRHPKCKLQKLRLSFVTF 715

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
                   ++  L  NK+L  L L GN IGD G++ L   L   + KL  L + + +++  
Sbjct: 716  PVTACRGISSSLTHNKNLMHLDLKGNDIGDNGVKLLCEALKHPECKLQKLSLESCNLTEV 775

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
                +   +   +SL+++NL  N++ D+G + + +AL+  +  +  + L    +      
Sbjct: 776  CCLDIFNALIRSQSLIFLNLSTNNLLDDGVKLLCEALRYPKCYLERLSLESCGLTEDVCE 835

Query: 434  AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVA 492
             ++  L  N  +T L LA N +G  G K +S+VL+     + +L L  C      +E+++
Sbjct: 836  DLSLALISNKRLTHLCLANNALGDSGIKLMSDVLQNPCCTLQSLVLRHCHFTLLSSEYLS 895

Query: 493  DMLRYNNTISILDLRANGLRDEGAKCLAQSFK---------------------------- 524
              L +N +++ LDL +N L+D+GAK L  +F+                            
Sbjct: 896  TSLLHNKSLTHLDLGSNRLQDDGAKLLCDAFRHPSCNLRDLELMGCVLTSACCLDLASVV 955

Query: 525  VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
            + N  L S+DL  N+++D+G   +  AL+ + D ++  L L    LT      L+
Sbjct: 956  LSNPNLWSLDLGKNDLQDEGVKILCDALR-HPDCSIQRLGLECCGLTSLSCEDLS 1009



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 173/372 (46%), Gaps = 21/372 (5%)

Query: 195  VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQL 253
            +SF    +TA   +     L  N  L  L+L GN IGD GVK LC+ L      +++L L
Sbjct: 710  LSFVTFPVTAC--RGISSSLTHNKNLMHLDLKGNDIGDNGVKLLCEALKHPECKLQKLSL 767

Query: 254  SSVDLRDEGAKAIAELLKNNSILRVLELN-NNMIDYSGFTSLAEAL------LENSTIRS 306
             S +L +     I   L  +  L  L L+ NN++D  G   L EAL      LE  ++ S
Sbjct: 768  ESCNLTEVCCLDIFNALIRSQSLIFLNLSTNNLLD-DGVKLLCEALRYPKCYLERLSLES 826

Query: 307  LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
              L  +         L+  L  NK L  L L  N++GD GI+ +   L +    L  L +
Sbjct: 827  CGLTEDV-----CEDLSLALISNKRLTHLCLANNALGDSGIKLMSDVLQNPCCTLQSLVL 881

Query: 367  GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGN 425
             +   +   + +++  + + KSL  ++L  N + D+GA+ + DA +     +  ++L G 
Sbjct: 882  RHCHFTLLSSEYLSTSLLHNKSLTHLDLGSNRLQDDGAKLLCDAFRHPSCNLRDLELMGC 941

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG--WCQI 483
             + S     +A V+  N  + SLDL  N +  +G K L + L+ H + +  +LG   C +
Sbjct: 942  VLTSACCLDLASVVLSNPNLWSLDLGKNDLQDEGVKILCDALR-HPDCSIQRLGLECCGL 1000

Query: 484  GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             +   E ++  L  N  +  ++L  N LR EG + L Q+ K  +  L  + L   E  D+
Sbjct: 1001 TSLSCEDLSSTLSSNQRLKKMNLAQNDLRCEGIRKLCQALKSPDCKLQVLGLC-KEAFDE 1059

Query: 544  GAFAIAQALKAN 555
             A  + +A++ +
Sbjct: 1060 EAQKLLEAVRVS 1071


>gi|320163929|gb|EFW40828.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 554

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 95/159 (59%), Gaps = 3/159 (1%)

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           ++   N I   GA A+A  LK N+ +T L L Y  +G  GA+A +E  K +  +  L L 
Sbjct: 19  LEFRTNQIGDAGAQAMAEALKVNTTLTELYLWYGQVGDAGAQAFAEAFKVNTTLTKLNLF 78

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
             QIG +GA+ + + L+ N T+S LDL  N + D  A  +A++ K  N  LT ++L  N+
Sbjct: 79  KNQIGWAGAQAIFEALQVNTTLSSLDLEENMIGDAEAHAIAETLKG-NTTLTWLNLGANQ 137

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           I D GA AIA+ALK N+ +A  +L L+NNFLTK G +AL
Sbjct: 138 IGDAGAQAIAEALKVNKTLA--NLFLSNNFLTKAGITAL 174



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 88/159 (55%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L+   N I   GA  +AE +K   +L  + L+   +GD GA+  A+A K N T+T ++L 
Sbjct: 19  LEFRTNQIGDAGAQAMAEALKVNTTLTELYLWYGQVGDAGAQAFAEAFKVNTTLTKLNLF 78

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I   GA AI   L+ N+ ++SLDL  N IG   A A++E LK +  +  L LG  QI
Sbjct: 79  KNQIGWAGAQAIFEALQVNTTLSSLDLEENMIGDAEAHAIAETLKGNTTLTWLNLGANQI 138

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           G +GA+ +A+ L+ N T++ L L  N L   G   L Q+
Sbjct: 139 GDAGAQAIAEALKVNKTLANLFLSNNFLTKAGITALKQT 177



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 81/153 (52%), Gaps = 1/153 (0%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L    N IGD G + + + L  N  +  L L    + D GA+A AE  K N+ L  L L 
Sbjct: 19  LEFRTNQIGDAGAQAMAEALKVNTTLTELYLWYGQVGDAGAQAFAEAFKVNTTLTKLNLF 78

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N I ++G  ++ EAL  N+T+ SL L  N  G   A+A+A+ L+GN +L  L+L  N I
Sbjct: 79  KNQIGWAGAQAIFEALQVNTTLSSLDLEENMIGDAEAHAIAETLKGNTTLTWLNLGANQI 138

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           GD G +A+   L   K  LA L + NN ++  G
Sbjct: 139 GDAGAQAIAEALKVNK-TLANLFLSNNFLTKAG 170



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 83/172 (48%), Gaps = 29/172 (16%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L    N  G  GA A+A+ L+ N +L EL+L    +GD G +A                 
Sbjct: 19  LEFRTNQIGDAGAQAMAEALKVNTTLTELYLWYGQVGDAGAQAF---------------- 62

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
                        AE  K   +L  +NL+ N IG  GA+ I +AL+ N T++++DL  N 
Sbjct: 63  -------------AEAFKVNTTLTKLNLFKNQIGWAGAQAIFEALQVNTTLSSLDLEENM 109

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           I    A AIA  LK N+ +T L+L  N IG  GA+A++E LK +  +  L L
Sbjct: 110 IGDAEAHAIAETLKGNTTLTWLNLGANQIGDAGAQAIAEALKVNKTLANLFL 161



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 79/157 (50%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E+ F  N I  AG +A    L+ N  L  L L    +GD G +   +    N  + +L L
Sbjct: 18  ELEFRTNQIGDAGAQAMAEALKVNTTLTELYLWYGQVGDAGAQAFAEAFKVNTTLTKLNL 77

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               +   GA+AI E L+ N+ L  L+L  NMI  +   ++AE L  N+T+  L+L  N 
Sbjct: 78  FKNQIGWAGAQAIFEALQVNTTLSSLDLEENMIGDAEAHAIAETLKGNTTLTWLNLGANQ 137

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            G  GA A+A+ L+ NK+L  L L  N +   GI AL
Sbjct: 138 IGDAGAQAIAEALKVNKTLANLFLSNNFLTKAGITAL 174



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 73/152 (48%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             GD G   +AE+L  N T  E+      +  AG +AF    + N  L  LNL  N IG 
Sbjct: 25  QIGDAGAQAMAEALKVNTTLTELYLWYGQVGDAGAQAFAEAFKVNTTLTKLNLFKNQIGW 84

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + + + L  N  +  L L    + D  A AIAE LK N+ L  L L  N I  +G  
Sbjct: 85  AGAQAIFEALQVNTTLSSLDLEENMIGDAEAHAIAETLKGNTTLTWLNLGANQIGDAGAQ 144

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           ++AEAL  N T+ +L L+ N+    G  AL +
Sbjct: 145 AIAEALKVNKTLANLFLSNNFLTKAGITALKQ 176



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           L+ R N + D GA+ +A++ K VN  LT + L + ++ D GA A A+A K N    +T L
Sbjct: 19  LEFRTNQIGDAGAQAMAEALK-VNTTLTELYLWYGQVGDAGAQAFAEAFKVN--TTLTKL 75

Query: 564 NLANNFLTKFGQSALTDA 581
           NL  N +   G  A+ +A
Sbjct: 76  NLFKNQIGWAGAQAIFEA 93


>gi|297695585|ref|XP_002825012.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Pongo abelii]
          Length = 471

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 135/267 (50%), Gaps = 3/267 (1%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G  G  A+A  L  N ++ +L L  N I +EG+ +L+  L      L  ++I
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENY-YLQEMNI 151

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            NN +  +GA  ++++ +   S +W + L  ND  +E A  +  AL  N  I  +DL  N
Sbjct: 152 SNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKEESAALLGQALSTNYRIKKLDLSHN 211

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                G   + ++L  N  +TSLDL++N     GA AL   L+ +  +  L L    +G 
Sbjct: 212 QFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLAKLDLSMNGLGN 271

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
             A  + ++LR N+ +  LD+  N + +EGA  +++  +  NE+L  + L  N I  DGA
Sbjct: 272 EVALALGEVLRLNSCLVYLDISGNDIGNEGASKISKGLES-NESLRVLKLFLNPINMDGA 330

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTK 572
             +  A+K N    +  L+++N  +++
Sbjct: 331 ILLILAIKRNPKSRMEELDISNVLVSE 357



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 4/291 (1%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     V+   +G+   G KA    L SN A+  L L  N I +EGV  L ++L +N  +
Sbjct: 87  NMEESYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLSLVEMLQENYYL 146

Query: 249 ERLQLSSVDLRDEGAKAIAELL-KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           + + +S+  L  EGA+ I++   +N+S +  LEL+ N         L +AL  N  I+ L
Sbjct: 147 QEMNISNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKEESAALLGQALSTNYRIKKL 206

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L+ N    +G   L + L  N  L  L L  N+    G  AL +GL      LA LD+ 
Sbjct: 207 DLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNV-TLAKLDLS 265

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            N +  + A  + E ++    L+++++  NDIG+EGA KI+  L+ N ++  + L  N I
Sbjct: 266 MNGLGNEVALALGEVLRLNSCLVYLDISGNDIGNEGASKISKGLESNESLRVLKLFLNPI 325

Query: 428 HSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  GA  +   +K N  S +  LD++   +     K L  V   H  ++ +
Sbjct: 326 NMDGAILLILAIKRNPKSRMEELDISNVLVSEQFMKTLDGVYAVHPQLDVV 376



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 2/231 (0%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE-EVSFAANGITA 204
           +  E   +L E  +E      +++S  + G EG   +++    N ++   +  + N    
Sbjct: 128 IMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSVWSLELSGNDFKE 187

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
                    L +N  +K L+LS N   D G + L  +L  N G+  L LS  +    GA 
Sbjct: 188 ESAALLGQALSTNYRIKKLDLSHNQFSDVGGEHLGQMLAINVGLTSLDLSWNNFHTRGAV 247

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+   L+ N  L  L+L+ N +      +L E L  NS +  L ++GN  G  GA+ ++K
Sbjct: 248 ALCNGLRGNVTLAKLDLSMNGLGNEVALALGEVLRLNSCLVYLDISGNDIGNEGASKISK 307

Query: 325 GLEGNKSLRELHLHGNSIGDEG-IRALMSGLSSRKGKLAVLDIGNNSISAK 374
           GLE N+SLR L L  N I  +G I  +++   + K ++  LDI N  +S +
Sbjct: 308 GLESNESLRVLKLFLNPINMDGAILLILAIKRNPKSRMEELDISNVLVSEQ 358


>gi|375151555|ref|NP_001243492.1| nucleotide-binding oligomerization domain containing 1 [Bos taurus]
 gi|296488448|tpg|DAA30561.1| TPA: nucleotide-binding oligomerization domain containing 1-like
           [Bos taurus]
          Length = 954

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   + E +   K L ++ LY N I D GA 
Sbjct: 720 GVRELQPCFS----RLTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGAR 775

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA  L + + +T + LG N I S+G  ++A  +K++  I  + +  N IG +GAKA +E
Sbjct: 776 YIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAE 835

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I   G + +A  L+ N ++ I  L  N L DE A+  A+  K 
Sbjct: 836 ALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLK- 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           VN+ L  + L  N+I   G   +A+AL+ N  +    LN
Sbjct: 895 VNQTLKHLWLIQNQITAKGIAQLAEALQKNTGIMEICLN 933



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K L  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 745 GVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKG-LTHLKLGKNKITSEGGK 803

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++A 
Sbjct: 804 SLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAW 863

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++ +E+LK +  +  L L   QI A G   +A+ L+ 
Sbjct: 864 ALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQK 923

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I  + L  N ++ E AK      +++
Sbjct: 924 NTGIMEICLNGNLIKPEEAKVFEDEKRII 952



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 2/206 (0%)

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N I D G++ L   L+  K  L  L + NN I+  GA ++A  +  CK L  + L  N I
Sbjct: 739 NQITDSGVKVLYEELTKYK-ILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGKNKI 797

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
             EG + +A A+K +++I  + + GN I  +GA A A  L+++  +T+L LA+N I  +G
Sbjct: 798 TSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEG 857

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
            K+L+  L+ + ++    L   ++    AE  A+ML+ N T+  L L  N +  +G   L
Sbjct: 858 GKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKGIAQL 917

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGA 545
           A++ +  N  +  I L  N I+ + A
Sbjct: 918 AEALQ-KNTGIMEICLNGNLIKPEEA 942



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 93/194 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E   + +  + + +      D G  ++A  L   +    +    N IT+ G K+  
Sbjct: 747 KVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGKNKITSEGGKSLA 806

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN IGDEG K   + L ++  +  L L+   +  EG K++A  L+
Sbjct: 807 LAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAWALQ 866

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ LR+  L  N +D     S AE L  N T++ L L  N   A G   LA+ L+ N  
Sbjct: 867 QNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKNTG 926

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 927 IMEICLNGNLIKPE 940



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 90/202 (44%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G +    +L     L  L L 
Sbjct: 734 IRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLG 793

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG K L   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 794 KNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGI 853

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA AL +N+++R   L  N      A + A+ L+ N++L+ L L  N I  +G
Sbjct: 854 STEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKG 913

Query: 347 IRALMSGLSSRKGKLAVLDIGN 368
           I  L   L    G + +   GN
Sbjct: 914 IAQLAEALQKNTGIMEICLNGN 935



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  ++L    K  ++   V M G   GDEG    AE+L  + +   +S A NGI+ 
Sbjct: 796 KITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGIST 855

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+   L+ N                            +L DE A+
Sbjct: 856 EGGKSLAWALQQNASLRIFWLTKN----------------------------ELDDEVAE 887

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           + AE+LK N  L+ L L  N I   G   LAEAL +N+ I  + LNGN
Sbjct: 888 SFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKNTGIMEICLNGN 935


>gi|126631387|gb|AAI34205.1| LOC556175 protein [Danio rerio]
          Length = 414

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 32/301 (10%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           L D+    + + L+ NS ++ L+L  N I   G   +A  + ++ +++SL L  N   A 
Sbjct: 53  LTDDDMLVLTKTLEGNSAIKGLDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEAD 112

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA  +AK L  N +L+ L + GN IG++G   L + L      L  +D+ +  ++ +   
Sbjct: 113 GAEVIAKSLHKNITLKTLRMTGNKIGNQGAMQLATMLQI-NATLEEVDVSDCDLATQSVI 171

Query: 378 HVAEYIKNCKSLLWINL---YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
             A  + N K +  IN+    +  + +E    +A  L  N T+  + +G +++   G   
Sbjct: 172 AFAIVLMNNKRICAINVSRPLLFSLQEETTVHMAQMLVVNNTLKELHMGKHDMTDTGVET 231

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +   LK N  +  LDL  N I  DGAK LSEVLK                          
Sbjct: 232 LCEALKRNISLRYLDLCCNRITRDGAKHLSEVLK-------------------------- 265

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
              N ++ ILDL  N + D+GA  L+++ K+ +  L ++ +  N+IR  G  +++ A++ 
Sbjct: 266 --QNCSLEILDLSFNRIEDDGAIHLSEAIKLPHSKLKALSVTSNKIRKGGLLSLSAAMRV 323

Query: 555 N 555
           N
Sbjct: 324 N 324



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 135/262 (51%), Gaps = 37/262 (14%)

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           + G S+ KG    LD+  N I+ KGA H+A  I++ KSL  ++L  NDI  +GAE IA +
Sbjct: 65  LEGNSAIKG----LDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEADGAEVIAKS 120

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           L +N T+ T+ + GN I ++GA  +A +L+ N+ +  +D++   +      A + VL  +
Sbjct: 121 LHKNITLKTLRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIAFAIVLMNN 180

Query: 471 GNI----------------------------NTLK---LGWCQIGASGAEFVADMLRYNN 499
             I                            NTLK   +G   +  +G E + + L+ N 
Sbjct: 181 KRICAINVSRPLLFSLQEETTVHMAQMLVVNNTLKELHMGKHDMTDTGVETLCEALKRNI 240

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
           ++  LDL  N +  +GAK L++  K  N +L  +DL+FN I DDGA  +++A+K      
Sbjct: 241 SLRYLDLCCNRITRDGAKHLSEVLK-QNCSLEILDLSFNRIEDDGAIHLSEAIKLPHS-K 298

Query: 560 VTSLNLANNFLTKFGQSALTDA 581
           + +L++ +N + K G  +L+ A
Sbjct: 299 LKALSVTSNKIRKGGLLSLSAA 320



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 148/313 (47%), Gaps = 18/313 (5%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   +D+      D+G   +A  +  +++ + +    N I A G +     L  NI LKT
Sbjct: 70  AIKGLDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEADGAEVIAKSLHKNITLKT 129

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L ++GN IG++G   L  +L  NA +E + +S  DL  +   A A +L NN  +  + ++
Sbjct: 130 LRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIAFAIVLMNNKRICAINVS 189

Query: 283 NNM---IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +   +       +A+ L+ N+T++ LH+  +     G   L + L+ N SLR L L  
Sbjct: 190 RPLLFSLQEETTVHMAQMLVVNNTLKELHMGKHDMTDTGVETLCEALKRNISLRYLDLCC 249

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMND 398
           N I  +G + L S +  +   L +LD+  N I   GA H++E IK   S L  +++  N 
Sbjct: 250 NRITRDGAKHL-SEVLKQNCSLEILDLSFNRIEDDGAIHLSEAIKLPHSKLKALSVTSNK 308

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA------RVLKDNSVITSLDLAY 452
           I   G   ++ A++ N ++T I + GN        A +      R+LK+++ ++      
Sbjct: 309 IRKGGLLSLSAAMRVNSSLTHIYIWGNKHEEPVCEAFSGLMSSGRLLKEHTDVS------ 362

Query: 453 NPIGADGAKALSE 465
            P   DG   L+E
Sbjct: 363 -PYEVDGHVFLAE 374



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 123/268 (45%), Gaps = 33/268 (12%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L+ N A+K L+L  N I D+G   +  ++ D+  ++ L L   D+  +GA+ IA+ L  
Sbjct: 64  TLEGNSAIKGLDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEADGAEVIAKSLHK 123

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH------------------LNGNYG 314
           N  L+ L +  N I   G   LA  L  N+T+  +                   +N    
Sbjct: 124 NITLKTLRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIAFAIVLMNNKRI 183

Query: 315 GALGAN-------------ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            A+  +              +A+ L  N +L+ELH+  + + D G+  L   L  R   L
Sbjct: 184 CAINVSRPLLFSLQEETTVHMAQMLVVNNTLKELHMGKHDMTDTGVETLCEAL-KRNISL 242

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTI 420
             LD+  N I+  GA H++E +K   SL  ++L  N I D+GA  +++A+K  +  +  +
Sbjct: 243 RYLDLCCNRITRDGAKHLSEVLKQNCSLEILDLSFNRIEDDGAIHLSEAIKLPHSKLKAL 302

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSL 448
            +  N I   G  +++  ++ NS +T +
Sbjct: 303 SVTSNKIRKGGLLSLSAAMRVNSSLTHI 330



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 34/213 (15%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + D+    +   L+ N  I  +DL  N I  KGA  IA +++D+  + SLDL  N I AD
Sbjct: 53  LTDDDMLVLTKTLEGNSAIKGLDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEAD 112

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN--------- 509
           GA+ +++ L  +  + TL++   +IG  GA  +A ML+ N T+  +D+            
Sbjct: 113 GAEVIAKSLHKNITLKTLRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIA 172

Query: 510 ----------------------GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
                                  L++E    +AQ   VVN  L  + +  +++ D G   
Sbjct: 173 FAIVLMNNKRICAINVSRPLLFSLQEETTVHMAQML-VVNNTLKELHMGKHDMTDTGVET 231

Query: 548 IAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           + +ALK N  +++  L+L  N +T+ G   L++
Sbjct: 232 LCEALKRN--ISLRYLDLCCNRITRDGAKHLSE 262


>gi|399497908|emb|CCG20282.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVGELKEIFK 492



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 147/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   L                            IK+ ++L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKAL----------------------------IKH-ENLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVGE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 138/269 (51%), Gaps = 7/269 (2%)

Query: 312 NYGGALGA-NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           N   AL   N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ 
Sbjct: 196 NEAAALDVMNIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDG 253

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           IS + A  V+E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+
Sbjct: 254 ISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSE 313

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G S +   L   S +  LDL  N  G +    L + L  H N+  + L +  +   GA  
Sbjct: 314 GGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIA 373

Query: 491 VADMLRYN-NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
           +A+ L+ +  ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA
Sbjct: 374 IANALKDSAPSLAVLEMAGNDITAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIA 432

Query: 550 QALKANEDVAVTSLNLANNFLTKFGQSAL 578
           +AL+ +    +  +++++N L + G   L
Sbjct: 433 KALEGHNH--LIEVDMSSNALRRAGARVL 459



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 5/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S ++ L+L+ N  G  G  A  K L+   +L EL L  + I  E   A+ S L    
Sbjct: 211 LEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAV-SELVPST 269

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE +K    L         +G EG   + +AL     + 
Sbjct: 270 EKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +    + + L  +  +T + L+Y  +  +GA A++  LK    ++  L+
Sbjct: 330 KLDLRDNMFGPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLE 389

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I A  A  +A  +     ++ L L  N L+DEGA  +A++ +  N  L  +D++ 
Sbjct: 390 MAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNH-LIEVDMSS 448

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVGELKE 489



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 2/275 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S    G++G+    + L      EE+    +GI+     A   ++ S   LK L+  
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N  GDEG   + +I+  +  +E  + SS  +  EG   + E L   S L+ L+L +NM 
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN-KSLRELHLHGNSIGDE 345
                  L +AL+++  +  ++L+       GA A+A  L+ +  SL  L + GN I  E
Sbjct: 339 GPEVGLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
              A+ S +++++  LA L +G N +  +GA  +A+ ++    L+ +++  N +   GA 
Sbjct: 399 AAPAIASCIAAKQ-LLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGAR 457

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
            +A  +        +++ GN I  +G   +  + K
Sbjct: 458 VLAQTVLHKDEFKLLNVNGNFISEEGVGELKEIFK 492



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L+ +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I      +
Sbjct: 343 GLVLCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVGELKEIFKKSPEML 498



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 10/244 (4%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N  +A    ++        +L ++NL  N +G++G     
Sbjct: 176 LATLKDQLKEVDLSDFVAGRNEAAALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
               +   +    ++G+ G   + + L   + +  LDLR N    E    L ++  + +E
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKAL-IKHE 354

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLV 585
            LT I L++  + D+GA AIA ALK +   ++  L +A N +T     A+     AK L+
Sbjct: 355 NLTEIYLSYLNLEDEGAIAIANALK-DSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLL 413

Query: 586 YEMS 589
            ++S
Sbjct: 414 AKLS 417


>gi|297286443|ref|XP_001092091.2| PREDICTED: leucine-rich repeat-containing protein 34 isoform 2
           [Macaca mulatta]
          Length = 432

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 27/219 (12%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD G N +   GA++ A+ ++   +L+++NL  NDIG EG E IA  L +N+T+  + + 
Sbjct: 128 LDAGYNLLGDVGAYYAAKLVQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNQTLKYLRMT 187

Query: 424 GNNIHSKGASA---------------------------IARVLKDNSVITSLDLAYNPIG 456
           GN I +KG  +                           I R+LK+N  +  L +  + I 
Sbjct: 188 GNKIENKGGMSFAAMLQINSSLEKLDLGDCDLEESTVHIGRMLKENHCLVVLHMCKHDIK 247

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G + L + L  + ++  L +   +I   G  ++AD+L+ N T+ ++DL  N + + GA
Sbjct: 248 NSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGA 307

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             L+++    N +L ++ +  N I  +G  A++Q++K N
Sbjct: 308 NYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTN 346



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 1/242 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G ++ A+ +        ++   N I   G +    VL  N  LK L ++GN I ++
Sbjct: 135 LGDVGAYYAAKLVQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNQTLKYLRMTGNKIENK 194

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G      +L  N+ +E+L L   DL +E    I  +LK N  L VL +  + I  SG   
Sbjct: 195 GGMSFAAMLQINSSLEKLDLGDCDL-EESTVHIGRMLKENHCLVVLHMCKHDIKNSGIQQ 253

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           L +AL  NS++R L ++ N     G   LA  L+ N +L  + L  N I + G   L   
Sbjct: 254 LCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGANYLSET 313

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L+S    L  L + +N+I  +G   +++ +K   +   I ++ N   +      +D ++ 
Sbjct: 314 LTSHNRSLKALSVVSNNIEGEGLVALSQSMKTNLTFSHIYIWGNKFDEATCVAYSDLIQM 373

Query: 414 NR 415
            R
Sbjct: 374 GR 375



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 139/325 (42%), Gaps = 12/325 (3%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  E  Q +N F   LR    VD   +         LA  +  N            +T  
Sbjct: 60  LCMEKSQKINPFI--LRILQEVDKEIKKG-------LAAGITLNIAGNNRLVPVERVTGE 110

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
                  +L++ + +  L+   N +GD G      ++     +  L L   D+  EG + 
Sbjct: 111 DFWILSRILKNCLYINGLDAGYNLLGDVGAYYAAKLVQKQLNLIYLNLMFNDIGPEGGEL 170

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           IA++L  N  L+ L +  N I+  G  S A  L  NS++  L L G+         + + 
Sbjct: 171 IAKVLHKNQTLKYLRMTGNKIENKGGMSFAAMLQINSSLEKLDL-GDCDLEESTVHIGRM 229

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N  L  LH+  + I + GI+ L   L      L  LD+  N I+  G  ++A+ +K+
Sbjct: 230 LKENHCLVVLHMCKHDIKNSGIQQLCDALY-LNSSLRYLDVSCNKITHDGMVYLADVLKS 288

Query: 386 CKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             +L  I+L  N I + GA  +++ L   NR++  + +  NNI  +G  A+++ +K N  
Sbjct: 289 NTTLEVIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTNLT 348

Query: 445 ITSLDLAYNPIGADGAKALSEVLKF 469
            + + +  N        A S++++ 
Sbjct: 349 FSHIYIWGNKFDEATCVAYSDLIQM 373


>gi|431910520|gb|ELK13591.1| Leucine-rich repeat-containing protein 34 [Pteropus alecto]
          Length = 452

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 4/268 (1%)

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           F  L+  L +N  I  L +  N+ G +GA   AK L+   SL  L+L  N IG EG   L
Sbjct: 100 FWILSRVLEKNPYINGLDVRYNFLGDVGAYYAAKLLQKQYSLIYLNLMFNDIGPEG-GEL 158

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           ++ +  +   L  L +  N I  KG    A  ++   SL  ++L   D+G +     A  
Sbjct: 159 IAKVLHKNTTLKYLRMTGNKIENKGGMFFATMLQINSSLEKLDLGDCDLGMQSVIAFATV 218

Query: 411 LKQNRTITTIDLGGNNIHSKGASA---IARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           L QN+TI  I+L    ++ +   +   +  +LK+N  +  L +  + I   G K L + L
Sbjct: 219 LTQNQTIKGINLNRPILYGEEEESTVHLGHMLKENHCLVELHMCKHDIRNYGIKHLCDAL 278

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
             + ++  L +   +I   G  F+AD+L+ N T+ ++DL  N + + GAK L+++    N
Sbjct: 279 YLNKSLRYLDVSCNEITRDGMVFLADVLKSNTTLEVIDLSFNRIENTGAKYLSETLASHN 338

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKAN 555
            +L ++ +  N I  +G  A++Q+LK N
Sbjct: 339 RSLKALSVVSNNIEGEGLVALSQSLKTN 366



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 4/205 (1%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N +   GA++ A+ ++   SL+++NL  NDIG EG E IA  L +N T+  + + 
Sbjct: 116 LDVRYNFLGDVGAYYAAKLLQKQYSLIYLNLMFNDIGPEGGELIAKVLHKNTTLKYLRMT 175

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I +KG    A +L+ NS +  LDL    +G     A + VL  +  I  + L    +
Sbjct: 176 GNKIENKGGMFFATMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNQTIKGINLNRPIL 235

Query: 484 GASGAE---FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
                E    +  ML+ N+ +  L +  + +R+ G K L  +   +N++L  +D++ NEI
Sbjct: 236 YGEEEESTVHLGHMLKENHCLVELHMCKHDIRNYGIKHLCDAL-YLNKSLRYLDVSCNEI 294

Query: 541 RDDGAFAIAQALKANEDVAVTSLNL 565
             DG   +A  LK+N  + V  L+ 
Sbjct: 295 TRDGMVFLADVLKSNTTLEVIDLSF 319



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 5/296 (1%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
           E  + L+  L  N     +    N +   G      +LQ   +L  LNL  N IG EG +
Sbjct: 98  EDFWILSRVLEKNPYINGLDVRYNFLGDVGAYYAAKLLQKQYSLIYLNLMFNDIGPEGGE 157

Query: 237 CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
            +  +L  N  ++ L+++   + ++G    A +L+ NS L  L+L +  +      + A 
Sbjct: 158 LIAKVLHKNTTLKYLRMTGNKIENKGGMFFATMLQINSSLEKLDLGDCDLGMQSVIAFAT 217

Query: 297 ALLENSTIRSLHLNGN--YGGALGANA-LAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
            L +N TI+ ++LN    YG    +   L   L+ N  L ELH+  + I + GI+ L   
Sbjct: 218 VLTQNQTIKGINLNRPILYGEEEESTVHLGHMLKENHCLVELHMCKHDIRNYGIKHLCDA 277

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-K 412
           L   K  L  LD+  N I+  G   +A+ +K+  +L  I+L  N I + GA+ +++ L  
Sbjct: 278 LYLNK-SLRYLDVSCNEITRDGMVFLADVLKSNTTLEVIDLSFNRIENTGAKYLSETLAS 336

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            NR++  + +  NNI  +G  A+++ LK N   +++ +  N        A S++++
Sbjct: 337 HNRSLKALSVVSNNIEGEGLVALSQSLKTNPTFSNIYIWGNKFDEATCVAYSDLIQ 392



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 7/195 (3%)

Query: 157 FAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSF---AANGITAAGIKAF 210
           FA  L+  SS+   D+   + G + +   A  L  NQT + ++       G         
Sbjct: 187 FATMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNQTIKGINLNRPILYGEEEESTVHL 246

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             +L+ N  L  L++  + I + G+K LCD L  N  +  L +S  ++  +G   +A++L
Sbjct: 247 GHMLKENHCLVELHMCKHDIRNYGIKHLCDALYLNKSLRYLDVSCNEITRDGMVFLADVL 306

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           K+N+ L V++L+ N I+ +G   L+E L   N ++++L +  N     G  AL++ L+ N
Sbjct: 307 KSNTTLEVIDLSFNRIENTGAKYLSETLASHNRSLKALSVVSNNIEGEGLVALSQSLKTN 366

Query: 330 KSLRELHLHGNSIGD 344
            +   +++ GN   +
Sbjct: 367 PTFSNIYIWGNKFDE 381


>gi|344925101|ref|ZP_08778562.1| hypothetical protein COdytL_10705 [Candidatus Odyssella
           thessalonicensis L13]
          Length = 301

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 119/245 (48%), Gaps = 2/245 (0%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           ++L  N T + +  A   + + G+      L+S  +L++L+LS NP+  E +K L   + 
Sbjct: 2   QALKSNMTLQRLKLAKLDLDSKGLATIIYSLESYPSLRSLDLSDNPLSLESIKGLAAYIK 61

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
            N  ++ L+L+SV L  EG K + E LK    LR L L  N +   G     E+   ++ 
Sbjct: 62  SNKNLKTLKLNSVSLTPEGLKILLEALKETQSLRHLSLKCNTLGPEGIKVFGESFTGSTF 121

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           +  L+L  N  G  G     +   G   L+ L L  N IG EGI++L + L      L  
Sbjct: 122 LERLNLASNNIGPEGIKVFVESFTGITFLKHLSLASNKIGPEGIKSL-ADLLMNNPSLTR 180

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE-KIADALKQNRTITTIDL 422
           LD+  N +  KG   +A  +K    L ++NL  N+I DEG +  I   L  N T+T +DL
Sbjct: 181 LDVSMNKLQYKGMPSLATALKVNTKLQYLNLATNNIYDEGVKILIQQGLTDNFTLTYLDL 240

Query: 423 GGNNI 427
             N++
Sbjct: 241 SSNDL 245



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 130/286 (45%), Gaps = 10/286 (3%)

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           +AL  N T++ L L      + G   +   LE   SLR L L  N +  E I+ L + + 
Sbjct: 2   QALKSNMTLQRLKLAKLDLDSKGLATIIYSLESYPSLRSLDLSDNPLSLESIKGLAAYIK 61

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           S K  L  L + + S++ +G   + E +K  +SL  ++L  N +G EG +   ++   + 
Sbjct: 62  SNKN-LKTLKLNSVSLTPEGLKILLEALKETQSLRHLSLKCNTLGPEGIKVFGESFTGST 120

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
            +  ++L  NNI  +G           + +  L LA N IG +G K+L+++L  + ++  
Sbjct: 121 FLERLNLASNNIGPEGIKVFVESFTGITFLKHLSLASNKIGPEGIKSLADLLMNNPSLTR 180

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
           L +   ++   G   +A  L+ N  +  L+L  N + DEG K L Q     N  LT +DL
Sbjct: 181 LDVSMNKLQYKGMPSLATALKVNTKLQYLNLATNNIYDEGVKILIQQGLTDNFTLTYLDL 240

Query: 536 AFNE---------IRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
           + N+         I  +    +       E+  +  L L NN LTK
Sbjct: 241 SSNDLAGVYYGDYIYGENTLNVKLLNLLQENPTIKQLILKNNSLTK 286



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 129/275 (46%), Gaps = 17/275 (6%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +  S+D+S      E +  LA  +  N+  + +   +  +T  G+K     L+   +L+ 
Sbjct: 37  SLRSLDLSDNPLSLESIKGLAAYIKSNKNLKTLKLNSVSLTPEGLKILLEALKETQSLRH 96

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+L  N +G EG+K   +    +  +ERL L+S ++  EG K   E     + L+ L L 
Sbjct: 97  LSLKCNTLGPEGIKVFGESFTGSTFLERLNLASNNIGPEGIKVFVESFTGITFLKHLSLA 156

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           +N I   G  SLA+ L+ N ++  L ++ N     G  +LA  L+ N  L+ L+L  N+I
Sbjct: 157 SNKIGPEGIKSLADLLMNNPSLTRLDVSMNKLQYKGMPSLATALKVNTKLQYLNLATNNI 216

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
            DEG++ L+    +    L  LD+ +N ++  G ++  +YI    +L             
Sbjct: 217 YDEGVKILIQQGLTDNFTLTYLDLSSNDLA--GVYY-GDYIYGENTL------------- 260

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
              K+ + L++N TI  + L  N++  +    + R
Sbjct: 261 -NVKLLNLLQENPTIKQLILKNNSLTKRNKELVKR 294


>gi|189163508|ref|NP_001032872.2| uncharacterized protein C14orf166B homolog [Rattus norvegicus]
 gi|158706430|sp|A0JPI9.1|CN16B_RAT RecName: Full=Uncharacterized protein C14orf166B homolog
 gi|117558794|gb|AAI27445.1| LOC314328 protein [Rattus norvegicus]
          Length = 479

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 148/288 (51%), Gaps = 9/288 (3%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G +G  A+A  L  N ++ +L L  NSI +EGI +LM  L      L  L++
Sbjct: 95  MNLNHHGLGPMGIKAIAITLVSNTTVLKLELEDNSIQEEGILSLMEMLHENY-YLQELNV 153

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +N++  +GA  ++++++   S LW + L  N   +E A  +  AL  N  I +++L  N
Sbjct: 154 SDNNLGLEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSHN 213

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                    + ++L  N  + SL+L++N     GA AL   L+ +  +  L +     G 
Sbjct: 214 EFSDTAGEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNGFGN 273

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + D L+ N+ +  +D+  NG+ +EGA  +++  +  NE L  + L  N +  +GA
Sbjct: 274 DGALALGDTLKLNSCLVYVDVSRNGITNEGASRISKGLE-NNECLQVLKLFLNPVSLEGA 332

Query: 546 FAIAQALKAN-----EDVAVTSLNLANNFLTKF-GQSALTDAKDLVYE 587
           +++  A+K N     ED+ ++++ ++  F+    G  A+    D+VY+
Sbjct: 333 YSLILAIKRNPKSRMEDLDISNVLVSEQFVKVLDGVCAIHPQLDVVYK 380



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 129/248 (52%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G+K +   LV N  V +L+L    +++EG  ++ E+L  N  L
Sbjct: 89  NMEESCMNLNHHGLGPMGIKAIAITLVSNTTVLKLELEDNSIQEEGILSLMEMLHENYYL 148

Query: 277 RVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L +++N +   G   +++ L E NS++  L L+GN      A  L + L  N  +R L
Sbjct: 149 QELNVSDNNLGLEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSL 208

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L  N   D     L   L+   G L  L++  N  + +GA  +   ++   +L  +++ 
Sbjct: 209 NLSHNEFSDTAGEYLGQMLALNVG-LQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVS 267

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G++GA  + D LK N  +  +D+  N I ++GAS I++ L++N  +  L L  NP+
Sbjct: 268 MNGFGNDGALALGDTLKLNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPV 327

Query: 456 GADGAKAL 463
             +GA +L
Sbjct: 328 SLEGAYSL 335



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 137/264 (51%), Gaps = 2/264 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G+  +A +L  N T  ++    N I   GI +   +L  N  L+ LN
Sbjct: 93  SCMNLNHHGLGPMGIKAIAITLVSNTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELN 152

Query: 225 LSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D L + N+ + +L+LS    ++E A  + + L +N  +R L L++
Sbjct: 153 VSDNNLGLEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSH 212

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N    +    L + L  N  ++SL+L+ N+    GA AL  GL  N +L++L +  N  G
Sbjct: 213 NEFSDTAGEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNGFG 272

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           ++G  AL   L      L  +D+  N I+ +GA  +++ ++N + L  + L++N +  EG
Sbjct: 273 NDGALALGDTLKLNSC-LVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPVSLEG 331

Query: 404 AEKIADALKQNRTITTIDLGGNNI 427
           A  +  A+K+N      DL  +N+
Sbjct: 332 AYSLILAIKRNPKSRMEDLDISNV 355



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 4/283 (1%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           +G+   GIKA    L SN  +  L L  N I +EG+  L ++L +N  ++ L +S  +L 
Sbjct: 100 HGLGPMGIKAIAITLVSNTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELNVSDNNLG 159

Query: 260 DEGAKAIAELLK-NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            EGA+ I++ L+ NNS L  L+L+ N         L +AL  N  IRSL+L+ N      
Sbjct: 160 LEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSHNEFSDTA 219

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              L + L  N  L+ L+L  N     G  AL +GL +    L  LD+  N     GA  
Sbjct: 220 GEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNV-TLKKLDVSMNGFGNDGALA 278

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           + + +K    L+++++  N I +EGA +I+  L+ N  +  + L  N +  +GA ++   
Sbjct: 279 LGDTLKLNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPVSLEGAYSLILA 338

Query: 439 LKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +K N  S +  LD++   +     K L  V   H  ++ +  G
Sbjct: 339 IKRNPKSRMEDLDISNVLVSEQFVKVLDGVCAIHPQLDVVYKG 381



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 113/228 (49%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L +N+ +  LEL +N I   G  SL E L EN  ++ L+++ N  G  GA  
Sbjct: 106 GIKAIAITLVSNTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELNVSDNNLGLEGARI 165

Query: 322 LAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++  L E N SL +L L GN   +E    L   LSS   ++  L++ +N  S     ++ 
Sbjct: 166 ISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNY-RIRSLNLSHNEFSDTAGEYLG 224

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  +NL  N     GA  + + L+ N T+  +D+  N   + GA A+   LK
Sbjct: 225 QMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNGFGNDGALALGDTLK 284

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  +D++ N I  +GA  +S+ L+ +  +  LKL    +   GA
Sbjct: 285 LNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPVSLEGA 332



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 29/207 (14%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +SG  F +E    L ++L  N     ++ + N  +    +    +L  N+ L++LNLS N
Sbjct: 182 LSGNKFKEECALLLCQALSSNYRIRSLNLSHNEFSDTAGEYLGQMLALNVGLQSLNLSWN 241

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
                G   LC+ L  N  +++L +S     ++GA A+ + LK NS L  ++++ N    
Sbjct: 242 HFNVRGAVALCNGLRTNVTLKKLDVSMNGFGNDGALALGDTLKLNSCLVYVDVSRN---- 297

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G T+                        GA+ ++KGLE N+ L+ L L  N +  EG  
Sbjct: 298 -GITN-----------------------EGASRISKGLENNECLQVLKLFLNPVSLEGAY 333

Query: 349 ALMSGLS-SRKGKLAVLDIGNNSISAK 374
           +L+  +  + K ++  LDI N  +S +
Sbjct: 334 SLILAIKRNPKSRMEDLDISNVLVSEQ 360


>gi|332857666|ref|XP_001139299.2| PREDICTED: NACHT, LRR and PYD domains-containing protein 5 [Pan
            troglodytes]
          Length = 1179

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 178/416 (42%), Gaps = 33/416 (7%)

Query: 169  MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSG 227
            M G+   +E        LG +    ++   ++ +T   +K     L+ S   ++TL    
Sbjct: 739  MRGKTLIEEQWEDFCSVLGTHPHLRQLDLGSSILTERAMKTLCAKLRHSTCKIQTLMFRN 798

Query: 228  NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
              I   GV+ L  IL+ N  +  L L    L++E  +   E LK+   L    L +  +D
Sbjct: 799  AQI-TAGVQHLWRILMANRNLRSLNLGGTHLKEEDVRMACEALKHPKCL----LESLRLD 853

Query: 288  YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
              G T      L+ S I                     L  + SL+ L L GN + D+G+
Sbjct: 854  CCGLTH--ACYLKISQI---------------------LTTSPSLKSLSLAGNKVTDQGV 890

Query: 348  RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
              L   L   +  L  L + +  I+A G   +A  + + +SL  + L  N +G+EG   +
Sbjct: 891  TPLSDALRVSQCALQKLILEDCGITATGCQSLASALVSNRSLTHLCLSNNSLGNEGVNLL 950

Query: 408  ADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
              +++  + ++  + L   ++ + G   +A  L  NS +T L L+ NP+  +G K L EV
Sbjct: 951  CRSMRLPHCSLQRLMLNQCHLDTAGCGFLALALMGNSWLTHLSLSMNPVEDNGVKLLCEV 1010

Query: 467  LKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            ++    ++  L+L  C + A+  E ++ ++  +  +  +DL  N L D G   L +  K 
Sbjct: 1011 MREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSMDLTDNALGDVGVAALCEGLKQ 1070

Query: 526  VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             N  LT + L    +  D   A++ AL  N    +T LNL  N  +  G   L  A
Sbjct: 1071 KNSVLTRLGLKACGLTSDCCEALSLALSCNRH--LTCLNLVQNNFSPKGMMKLCSA 1124



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 163/373 (43%), Gaps = 4/373 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+      +  +  L   L ++    +     N    AG++    +L +N  L++LNL 
Sbjct: 765  LDLGSSILTERAMKTLCAKLRHSTCKIQTLMFRNAQITAGVQHLWRILMANRNLRSLNLG 824

Query: 227  GNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            G  + +E V+  C+ L      +E L+L    L       I+++L  +  L+ L L  N 
Sbjct: 825  GTHLKEEDVRMACEALKHPKCLLESLRLDCCGLTHACYLKISQILTTSPSLKSLSLAGNK 884

Query: 286  IDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
            +   G T L++AL +    ++ L L      A G  +LA  L  N+SL  L L  NS+G+
Sbjct: 885  VTDQGVTPLSDALRVSQCALQKLILEDCGITATGCQSLASALVSNRSLTHLCLSNNSLGN 944

Query: 345  EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
            EG+  L   +      L  L +    +   G   +A  +     L  ++L MN + D G 
Sbjct: 945  EGVNLLCRSMRLPHCSLQRLMLNQCHLDTAGCGFLALALMGNSWLTHLSLSMNPVEDNGV 1004

Query: 405  EKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            + + + +++    +  ++L   ++ +    +++ V+  +  + S+DL  N +G  G  AL
Sbjct: 1005 KLLCEVMREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSMDLTDNALGDVGVAAL 1064

Query: 464  SEVLKFHGNINT-LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
             E LK   ++ T L L  C + +   E ++  L  N  ++ L+L  N    +G   L  +
Sbjct: 1065 CEGLKQKNSVLTRLGLKACGLTSDCCEALSLALSCNRHLTCLNLVQNNFSPKGMMKLCSA 1124

Query: 523  FKVVNEALTSIDL 535
            F      L  I L
Sbjct: 1125 FACPTSNLQIIGL 1137


>gi|257468329|ref|NP_001028603.1| NACHT, LRR and PYD domains-containing protein 12 [Mus musculus]
 gi|410591643|sp|E9Q5R7.1|NAL12_MOUSE RecName: Full=NACHT, LRR and PYD domains-containing protein 12;
            AltName: Full=Monarch-1; AltName: Full=PYRIN-containing
            APAF1-like protein 7; Short=PYPAF7
          Length = 1054

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 147/318 (46%), Gaps = 14/318 (4%)

Query: 216  SNIALKTLNLSGNPIGDEGVKCLCDIL------VDNAGVERLQLSSVDLRDEGAKAIAEL 269
            +N  L  L L  N +G +GV+ LC  L      + N  ++R Q+S    +D  A  IA  
Sbjct: 704  TNSNLIELALYRNALGSQGVRLLCQGLRHASCKLQNLRLKRCQISGSACQDLAAAVIA-- 761

Query: 270  LKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEG 328
              N +++R L+L++N I   G   L E L      ++ + L      A    +LA  L  
Sbjct: 762  --NRNLIR-LDLSDNSIGVPGLELLCEGLQHPRCRLQMIQLRKCLLEAAAGRSLASVLSN 818

Query: 329  NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
            N  L EL L GN + D G++ L  GL     +L  L +    +       +A  +K  +S
Sbjct: 819  NSYLVELDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCEDLASTLKMNQS 878

Query: 389  LLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
            LL ++L +ND+GD G   + + L   +  + T+ LG   + S     IA VL+ N+ +  
Sbjct: 879  LLELDLGLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQVNTCLQE 938

Query: 448  LDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            LDL++N +G  G + L E L+     +  L L  C + +   E ++ +L  + T+  L L
Sbjct: 939  LDLSFNDLGDRGLQLLGEGLRHQTCRLQKLWLDNCGLTSKACEDLSSILGISQTLHELYL 998

Query: 507  RANGLRDEGAKCLAQSFK 524
              N L D G   L +  +
Sbjct: 999  TNNALGDTGVCLLCKRLR 1016



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 137/302 (45%), Gaps = 4/302 (1%)

Query: 174  FGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G +G+  L + L +     + +      I+ +  +     + +N  L  L+LS N IG 
Sbjct: 718  LGSQGVRLLCQGLRHASCKLQNLRLKRCQISGSACQDLAAAVIANRNLIRLDLSDNSIGV 777

Query: 233  EGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
             G++ LC+ L      ++ +QL    L     +++A +L NNS L  L+L  N ++ SG 
Sbjct: 778  PGLELLCEGLQHPRCRLQMIQLRKCLLEAAAGRSLASVLSNNSYLVELDLTGNPLEDSGL 837

Query: 292  TSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              L + L      +R+L L   + G      LA  L+ N+SL EL L  N +GD G+  L
Sbjct: 838  KLLCQGLRHPVCRLRTLWLKICHLGQASCEDLASTLKMNQSLLELDLGLNDLGDSGVLLL 897

Query: 351  MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              GLS    KL  L +G   + +     +A  ++    L  ++L  ND+GD G + + + 
Sbjct: 898  CEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQVNTCLQELDLSFNDLGDRGLQLLGEG 957

Query: 411  LK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L+ Q   +  + L    + SK    ++ +L  +  +  L L  N +G  G   L + L+ 
Sbjct: 958  LRHQTCRLQKLWLDNCGLTSKACEDLSSILGISQTLHELYLTNNALGDTGVCLLCKRLRH 1017

Query: 470  HG 471
             G
Sbjct: 1018 PG 1019



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 123/273 (45%), Gaps = 31/273 (11%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L EL L+ N++G +G+R L  GL     KL  L +    IS      +A  +   ++
Sbjct: 705 NSNLIELALYRNALGSQGVRLLCQGLRHASCKLQNLRLKRCQISGSACQDLAAAVIANRN 764

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           L+ ++L  N IG  G E + + L+  R  +  I L    + +    ++A VL +NS +  
Sbjct: 765 LIRLDLSDNSIGVPGLELLCEGLQHPRCRLQMIQLRKCLLEAAAGRSLASVLSNNSYLVE 824

Query: 448 LDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           LDL  NP+   G K L + L+     + TL L  C +G +  E +A  L+ N ++  LDL
Sbjct: 825 LDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCEDLASTLKMNQSLLELDL 884

Query: 507 RANGLRDEGA----------KCLAQSFKV------------------VNEALTSIDLAFN 538
             N L D G            C  Q+ ++                  VN  L  +DL+FN
Sbjct: 885 GLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQVNTCLQELDLSFN 944

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
           ++ D G   + + L+ ++   +  L L N  LT
Sbjct: 945 DLGDRGLQLLGEGLR-HQTCRLQKLWLDNCGLT 976



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 3/201 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D++G    D GL  L + L +       +      +  A  +     L+ N +L  L+L
Sbjct: 825  LDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCEDLASTLKMNQSLLELDL 884

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
              N +GD GV  LC+ L   +  ++ L+L    L       IA +L+ N+ L+ L+L+ N
Sbjct: 885  GLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQVNTCLQELDLSFN 944

Query: 285  MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             +   G   L E L   +  ++ L L+     +     L+  L  +++L EL+L  N++G
Sbjct: 945  DLGDRGLQLLGEGLRHQTCRLQKLWLDNCGLTSKACEDLSSILGISQTLHELYLTNNALG 1004

Query: 344  DEGIRALMSGLSSRKGKLAVL 364
            D G+  L   L     KL VL
Sbjct: 1005 DTGVCLLCKRLRHPGCKLRVL 1025


>gi|348517451|ref|XP_003446247.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Oreochromis niloticus]
          Length = 941

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 127/252 (50%), Gaps = 4/252 (1%)

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
             A+  +L++   L  L+++NN I   G   L  +  + + +R   L  N+        L
Sbjct: 680 CTALNFVLQHRQKLLGLDMDNNNISDYGVKQLKPSFCKMTVVR---LCVNHLSDRSIEIL 736

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A+ L  +K +  L L+ N+I D G R L++ +     KL VL IG N I++ G  H+A  
Sbjct: 737 AEELCKHKVVEVLGLYNNNITDAGAR-LVAQIIEECPKLRVLKIGKNKITSVGGRHLANA 795

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           IK   S+  + ++ N IGDEGAE   +AL+ + ++T + L  N I S+G   +A  LK+N
Sbjct: 796 IKKSSSIFDVGMWGNSIGDEGAEAFGEALRNHPSLTNLSLSANCITSRGGRGLAEALKEN 855

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           + +    L  N +  D A  L+++++ +  +  L L   Q    G   +A+ L +N  + 
Sbjct: 856 TALRIFWLVENEMTDDAAPHLADMIQANTGLTHLWLISNQFTVEGIRQLAEALTHNKGLK 915

Query: 503 ILDLRANGLRDE 514
            + ++ N L +E
Sbjct: 916 EICVKGNRLSEE 927



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 26/291 (8%)

Query: 198 AANGITAAGIK------------AFDGVLQSNIALKTLNLSGNPIGDEGVKCL----CDI 241
            A GITA  IK            A + VLQ    L  L++  N I D GVK L    C +
Sbjct: 659 TAKGITAGFIKLGYCNVYSGDCTALNFVLQHRQKLLGLDMDNNNISDYGVKQLKPSFCKM 718

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            V       ++L    L D   + +AE L  + ++ VL L NN I  +G   +A+ + E 
Sbjct: 719 TV-------VRLCVNHLSDRSIEILAEELCKHKVVEVLGLYNNNITDAGARLVAQIIEEC 771

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +R L +  N   ++G   LA  ++ + S+ ++ + GNSIGDEG  A    L +    L
Sbjct: 772 PKLRVLKIGKNKITSVGGRHLANAIKKSSSIFDVGMWGNSIGDEGAEAFGEALRNHPS-L 830

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +  N I+++G   +AE +K   +L    L  N++ D+ A  +AD ++ N  +T + 
Sbjct: 831 TNLSLSANCITSRGGRGLAEALKENTALRIFWLVENEMTDDAAPHLADMIQANTGLTHLW 890

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL--SEVLKFH 470
           L  N    +G   +A  L  N  +  + +  N +  +  +     + L+FH
Sbjct: 891 LISNQFTVEGIRQLAEALTHNKGLKEICVKGNRLSEEEEQQFVSEKRLRFH 941



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 7/285 (2%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSG-FTSLAEALLENSTIRSLHLNGNYGGALG 318
           + G+K IAE+         ++L    + YSG  T+L   L     +  L ++ N     G
Sbjct: 649 ETGSKDIAEMTAKGITAGFIKLGYCNV-YSGDCTALNFVLQHRQKLLGLDMDNNNISDYG 707

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              L         +R   L  N + D  I  L   L   K  + VL + NN+I+  GA  
Sbjct: 708 VKQLKPSFCKMTVVR---LCVNHLSDRSIEILAEELCKHK-VVEVLGLYNNNITDAGARL 763

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           VA+ I+ C  L  + +  N I   G   +A+A+K++ +I  + + GN+I  +GA A    
Sbjct: 764 VAQIIEECPKLRVLKIGKNKITSVGGRHLANAIKKSSSIFDVGMWGNSIGDEGAEAFGEA 823

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+++  +T+L L+ N I + G + L+E LK +  +    L   ++    A  +ADM++ N
Sbjct: 824 LRNHPSLTNLSLSANCITSRGGRGLAEALKENTALRIFWLVENEMTDDAAPHLADMIQAN 883

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
             ++ L L +N    EG + LA++    N+ L  I +  N + ++
Sbjct: 884 TGLTHLWLISNQFTVEGIRQLAEAL-THNKGLKEICVKGNRLSEE 927



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 118/239 (49%), Gaps = 8/239 (3%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
            + KL  LD+ NN+IS  G   +      CK  + + L +N + D   E +A+ L +++ 
Sbjct: 689 HRQKLLGLDMDNNNISDYGVKQLKPSF--CKMTV-VRLCVNHLSDRSIEILAEELCKHKV 745

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  + L  NNI   GA  +A+++++   +  L +  N I + G + L+  +K   +I  +
Sbjct: 746 VEVLGLYNNNITDAGARLVAQIIEECPKLRVLKIGKNKITSVGGRHLANAIKKSSSIFDV 805

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            +    IG  GAE   + LR + +++ L L AN +   G + LA++ K  N AL    L 
Sbjct: 806 GMWGNSIGDEGAEAFGEALRNHPSLTNLSLSANCITSRGGRGLAEALKE-NTALRIFWLV 864

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 595
            NE+ DD A  +A  ++AN    +T L L +N  T  G   L +A  L +    KE+ +
Sbjct: 865 ENEMTDDAAPHLADMIQAN--TGLTHLWLISNQFTVEGIRQLAEA--LTHNKGLKEICV 919



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           KQ    F K     + V +   +  D  +  LAE L  ++  E +    N IT AG +  
Sbjct: 709 KQLKPSFCK----MTVVRLCVNHLSDRSIEILAEELCKHKVVEVLGLYNNNITDAGARLV 764

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             +++    L+ L +  N I   G + L + +  ++ +  + +    + DEGA+A  E L
Sbjct: 765 AQIIEECPKLRVLKIGKNKITSVGGRHLANAIKKSSSIFDVGMWGNSIGDEGAEAFGEAL 824

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           +N+  L  L L+ N I   G   LAEAL EN+ +R   L  N      A  LA  ++ N 
Sbjct: 825 RNHPSLTNLSLSANCITSRGGRGLAEALKENTALRIFWLVENEMTDDAAPHLADMIQANT 884

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L  L L  N    EGIR L   L+  KG   +   GN
Sbjct: 885 GLTHLWLISNQFTVEGIRQLAEALTHNKGLKEICVKGN 922



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 3/206 (1%)

Query: 150 SKQTLNEFAKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
           S +++   A+EL     V++ G    N  D G   +A+ +        +    N IT+ G
Sbjct: 729 SDRSIEILAEELCKHKVVEVLGLYNNNITDAGARLVAQIIEECPKLRVLKIGKNKITSVG 788

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            +     ++ + ++  + + GN IGDEG +   + L ++  +  L LS+  +   G + +
Sbjct: 789 GRHLANAIKKSSSIFDVGMWGNSIGDEGAEAFGEALRNHPSLTNLSLSANCITSRGGRGL 848

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           AE LK N+ LR+  L  N +       LA+ +  N+ +  L L  N     G   LA+ L
Sbjct: 849 AEALKENTALRIFWLVENEMTDDAAPHLADMIQANTGLTHLWLISNQFTVEGIRQLAEAL 908

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMS 352
             NK L+E+ + GN + +E  +  +S
Sbjct: 909 THNKGLKEICVKGNRLSEEEEQQFVS 934


>gi|399497828|emb|CCG20242.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHXHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA++LK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHXHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKLLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N   DEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGH--X 439

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 440 HLIEVDMSSNALRRAGARVL 459



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 134/283 (47%), Gaps = 5/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S ++ L+L+ N  G  G  A  K L+   +L EL L  + I  E   A+   + S +
Sbjct: 211 LEGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN  + +GA  +AE +K    L         +G EG   + +AL     + 
Sbjct: 271 -KLKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +    + + L  +  +T + L+Y  +  +GA A++  LK    ++  L+
Sbjct: 330 KLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLE 389

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I A  A  +A  +     ++ L L  N L+DEGA  +A++ +  +  L  +D++ 
Sbjct: 390 MAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEG-HXHLIEVDMSS 448

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N    +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AIA +LK +   ++  L +A N +T
Sbjct: 369 EGAIAIANSLK-DSAPSLAVLEMAGNDIT 396


>gi|19882273|gb|AAL15549.1| maternal-antigen-that-embryos-require protein [Homo sapiens]
          Length = 1200

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 4/307 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R   S+++ G +  +E +    E+L + +   E +     G+T A       +L ++ +L
Sbjct: 837  RNLRSLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDCCGLTHACYLKISQILTTSPSL 896

Query: 221  KTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            K+L+L+GN + D+GV  L D L V    +++L L    +   G +++A  L +N  L  L
Sbjct: 897  KSLSLAGNKVTDQGVTPLSDALRVSQCALQKLILEDCGITATGCQSLASALVSNRSLTHL 956

Query: 280  ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
             L+NN +   G   L  ++ L + +++ L LN  +    G  +LA  L GN  L  L L 
Sbjct: 957  CLSNNSLGNEGVNLLCRSMRLPHCSLQRLMLNQCHLDTAGCGSLALALMGNSWLTHLSLS 1016

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N + D G++ L   +      L  L++    ++A     ++  I   + L  ++L  N 
Sbjct: 1017 MNPVEDNGVKLLCEVMREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSLDLTDNA 1076

Query: 399  IGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            +GD G   + + LKQ N  +T + L    + S    A++  L  N  +TSL+L  N    
Sbjct: 1077 LGDGGVAALCEGLKQKNSVLTRLGLKACGLTSDCCEALSLALSCNRHLTSLNLVQNNFSP 1136

Query: 458  DGAKALS 464
             G   L 
Sbjct: 1137 KGMMKLC 1143



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 180/416 (43%), Gaps = 33/416 (7%)

Query: 169  MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSG 227
            M  +   +E        LG +    ++   ++ +T   +K     L+     ++TL    
Sbjct: 760  MRDKTLIEEQWEDFCSMLGTHPHLRQLDLGSSILTERAMKTLCAKLRHPTCKIQTLMFRN 819

Query: 228  NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
              I   GV+ L  I++ N  +  L L    L++E  +   E LK+   L    L +  +D
Sbjct: 820  AQI-TPGVQHLWRIVMANRNLRSLNLGGTHLKEEDVRMACEALKHPKCL----LESLRLD 874

Query: 288  YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
              G T             + +L            +++ L  + SL+ L L GN + D+G+
Sbjct: 875  CCGLT------------HACYLK-----------ISQILTTSPSLKSLSLAGNKVTDQGV 911

Query: 348  RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
              L   L   +  L  L + +  I+A G   +A  + + +SL  + L  N +G+EG   +
Sbjct: 912  TPLSDALRVSQCALQKLILEDCGITATGCQSLASALVSNRSLTHLCLSNNSLGNEGVNLL 971

Query: 408  ADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
              +++  + ++  + L   ++ + G  ++A  L  NS +T L L+ NP+  +G K L EV
Sbjct: 972  CRSMRLPHCSLQRLMLNQCHLDTAGCGSLALALMGNSWLTHLSLSMNPVEDNGVKLLCEV 1031

Query: 467  LKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            ++    ++  L+L  C + A+  E ++ ++  +  +  LDL  N L D G   L +  K 
Sbjct: 1032 MREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSLDLTDNALGDGGVAALCEGLKQ 1091

Query: 526  VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             N  LT + L    +  D   A++ AL  N    +TSLNL  N  +  G   L  A
Sbjct: 1092 KNSVLTRLGLKACGLTSDCCEALSLALSCNRH--LTSLNLVQNNFSPKGMMKLCSA 1145


>gi|207743100|ref|YP_002259492.1| lrr-gala family type III effector protein c terminal part
           [Ralstonia solanacearum IPO1609]
 gi|206594497|emb|CAQ61424.1| probable lrr-gala family type III effector protein c terminal part
           [Ralstonia solanacearum IPO1609]
          Length = 253

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 142/276 (51%), Gaps = 39/276 (14%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N+    ++ ++NGI   G++A    L +N  + TL++S N IGDEG +     L  N  +
Sbjct: 7   NKKLTTLNVSSNGIGPVGVRA----LAANTTITTLDISNNEIGDEGARA----LASNTAL 58

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
            RL  S   +  EG +A+A     ++ L  L+L+ N I+  G     EAL  N+T+R+LH
Sbjct: 59  TRLDASDCGIGPEGTQALAT----STTLTSLDLSYNAIEAEGV----EALGRNTTLRTLH 110

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
             GN  G   A  LA     N +L  L+L  N+IG+ G RA  +  +     L  L++ N
Sbjct: 111 ACGNELGHREAELLAA----NTTLTVLNLSSNAIGNAGARAFGANTT-----LVELNLSN 161

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I       V E+  N K L  ++L  N IGD  A+ +A     + T+TT+++G N I 
Sbjct: 162 NGIE-----RVPEWADNGK-LTTLDLSNNQIGDTAAQVLA----ASHTLTTLNVGSNRIG 211

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             GA A+A     N+ +T+L+++ N IG  G  AL+
Sbjct: 212 DTGACALA----GNTTLTTLNVSLNRIGKAGMLALA 243



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 43/240 (17%)

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           +R  KL  L++ +N I   G   +A       ++  +++  N+IGDEGA     AL  N 
Sbjct: 5   ARNKKLTTLNVSSNGIGPVGVRALAAN----TTITTLDISNNEIGDEGAR----ALASNT 56

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
            +T +D     I  +G  A+A     ++ +TSLDL+YN I A+G +AL      +  + T
Sbjct: 57  ALTRLDASDCGIGPEGTQALAT----STTLTSLDLSYNAIEAEGVEALGR----NTTLRT 108

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV--------- 526
           L     ++G   AE +A     N T+++L+L +N + + GA+    +  +V         
Sbjct: 109 LHACGNELGHREAELLA----ANTTLTVLNLSSNAIGNAGARAFGANTTLVELNLSNNGI 164

Query: 527 --------NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
                   N  LT++DL+ N+I D      AQ L A+    +T+LN+ +N +   G  AL
Sbjct: 165 ERVPEWADNGKLTTLDLSNNQIGDTA----AQVLAASH--TLTTLNVGSNRIGDTGACAL 218


>gi|405976905|gb|EKC41383.1| hypothetical protein CGI_10025655 [Crassostrea gigas]
          Length = 554

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 125/270 (46%), Gaps = 29/270 (10%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +S   +G+ + G++A    L SN ++ TL+LS N +G  G   +C++L DN  +  L L
Sbjct: 139 HLSMKHHGLGSQGMRAIAMSLVSNTSVLTLDLSDNWLGHPGGHAVCEMLRDNCFITHLDL 198

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           S      + A+++++ L+ NS L  + L+ N  D       ++A++  + +  L+L+ N 
Sbjct: 199 SDNKFGLQTAESLSQTLQQNSTLTHVTLSGNDFDDKAAVHFSDAIMNTTKLEYLNLSHNL 258

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G      L   +  N SL+EL L                               NSI  
Sbjct: 259 FGENAGIILGPAIADNSSLKELDLSW-----------------------------NSIRR 289

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           KGA  +A+ IKN   +  INL  N  G EG+    DALK N+ +  +DL  N I S+GA 
Sbjct: 290 KGAVAIAQGIKNNVYMKKINLAWNGFGLEGSIAFGDALKGNQVLEELDLTNNRITSEGAV 349

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            I + +  N  +T++ L  NP+   G   +
Sbjct: 350 LIGKGVSVNETLTTIRLGRNPMQTAGCYGI 379



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 149/346 (43%), Gaps = 65/346 (18%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
            L +    L  +G +AIA  L +N+ +  L+L++N + + G  ++ E L +N  I  L L
Sbjct: 139 HLSMKHHGLGSQGMRAIAMSLVSNTSVLTLDLSDNWLGHPGGHAVCEMLRDNCFITHLDL 198

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N  G   A +L++ L+ N +L  + L GN   D                         
Sbjct: 199 SDNKFGLQTAESLSQTLQQNSTLTHVTLSGNDFDD------------------------- 233

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
               K A H ++ I N   L ++NL  N  G+     +  A+  N ++  +DL  N+I  
Sbjct: 234 ----KAAVHFSDAIMNTTKLEYLNLSHNLFGENAGIILGPAIADNSSLKELDLSWNSIRR 289

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           KGA AIA+ +K+N  +  ++LA+N  G +G+ A                           
Sbjct: 290 KGAVAIAQGIKNNVYMKKINLAWNGFGLEGSIAF-------------------------- 323

Query: 490 FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
              D L+ N  +  LDL  N +  EGA  + +    VNE LT+I L  N ++  G + I 
Sbjct: 324 --GDALKGNQVLEELDLTNNRITSEGAVLIGKGVS-VNETLTTIRLGRNPMQTAGCYGIC 380

Query: 550 QALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 595
            A+  N + A+  L+  +  + K       D  D+  ++ E+  +I
Sbjct: 381 AAILRNPNCALKELDFKDILVNK-------DFDDIFKQVQEQVPDI 419



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 119/246 (48%), Gaps = 1/246 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           M     G +G+  +A SL  N +   +  + N +   G  A   +L+ N  +  L+LS N
Sbjct: 142 MKHHGLGSQGMRAIAMSLVSNTSVLTLDLSDNWLGHPGGHAVCEMLRDNCFITHLDLSDN 201

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
             G +  + L   L  N+ +  + LS  D  D+ A   ++ + N + L  L L++N+   
Sbjct: 202 KFGLQTAESLSQTLQQNSTLTHVTLSGNDFDDKAAVHFSDAIMNTTKLEYLNLSHNLFGE 261

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +    L  A+ +NS+++ L L+ N     GA A+A+G++ N  +++++L  N  G EG  
Sbjct: 262 NAGIILGPAIADNSSLKELDLSWNSIRRKGAVAIAQGIKNNVYMKKINLAWNGFGLEGSI 321

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A    L   +  L  LD+ NN I+++GA  + + +   ++L  I L  N +   G   I 
Sbjct: 322 AFGDALKGNQ-VLEELDLTNNRITSEGAVLIGKGVSVNETLTTIRLGRNPMQTAGCYGIC 380

Query: 409 DALKQN 414
            A+ +N
Sbjct: 381 AAILRN 386



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 45/235 (19%)

Query: 382 YIKNCKSL-----LWINLYMND---------IGDEGAEKIADALKQNRTITTIDLGGNNI 427
           YI+ CK +      +   +MND         +G +G   IA +L  N ++ T+DL  N +
Sbjct: 116 YIEGCKKVGVVPASYFLRHMNDPHLSMKHHGLGSQGMRAIAMSLVSNTSVLTLDLSDNWL 175

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK---------FHGN------ 472
              G  A+  +L+DN  IT LDL+ N  G   A++LS+ L+           GN      
Sbjct: 176 GHPGGHAVCEMLRDNCFITHLDLSDNKFGLQTAESLSQTLQQNSTLTHVTLSGNDFDDKA 235

Query: 473 --------INTLKLGWCQI-----GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
                   +NT KL +  +     G +    +   +  N+++  LDL  N +R +GA  +
Sbjct: 236 AVHFSDAIMNTTKLEYLNLSHNLFGENAGIILGPAIADNSSLKELDLSWNSIRRKGAVAI 295

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           AQ  K  N  +  I+LA+N    +G+ A   ALK N+   +  L+L NN +T  G
Sbjct: 296 AQGIK-NNVYMKKINLAWNGFGLEGSIAFGDALKGNQ--VLEELDLTNNRITSEG 347



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 110/253 (43%), Gaps = 10/253 (3%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++D+S    G  G   + E L  N     +  + N       ++    LQ N  L  + L
Sbjct: 167 TLDLSDNWLGHPGGHAVCEMLRDNCFITHLDLSDNKFGLQTAESLSQTLQQNSTLTHVTL 226

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           SGN   D+      D +++   +E L LS     +     +   + +NS L+ L+L+ N 
Sbjct: 227 SGNDFDDKAAVHFSDAIMNTTKLEYLNLSHNLFGENAGIILGPAIADNSSLKELDLSWNS 286

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           I   G  ++A+ +  N  ++ ++L  N  G  G+ A    L+GN+ L EL L  N I  E
Sbjct: 287 IRRKGAVAIAQGIKNNVYMKKINLAWNGFGLEGSIAFGDALKGNQVLEELDLTNNRITSE 346

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI---KNC--KSL----LWINLYM 396
           G   +  G+S  +  L  + +G N +   G + +   I    NC  K L    + +N   
Sbjct: 347 GAVLIGKGVSVNE-TLTTIRLGRNPMQTAGCYGICAAILRNPNCALKELDFKDILVNKDF 405

Query: 397 NDIGDEGAEKIAD 409
           +DI  +  E++ D
Sbjct: 406 DDIFKQVQEQVPD 418


>gi|399498016|emb|CCG20336.1| Ran GTPase activating protein 2 [Solanum sparsipilum]
          Length = 553

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AIA ALK +   ++  L +A N +T
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|91205254|ref|YP_537609.1| hypothetical protein RBE_0439 [Rickettsia bellii RML369-C]
 gi|239947374|ref|ZP_04699127.1| leucine Rich Repeat domain protein [Rickettsia endosymbiont of
           Ixodes scapularis]
 gi|383482251|ref|YP_005391165.1| hypothetical protein MCI_00705 [Rickettsia montanensis str. OSU
           85-930]
 gi|91068798|gb|ABE04520.1| Leucine-rich repeat protein [Rickettsia bellii RML369-C]
 gi|239921650|gb|EER21674.1| leucine Rich Repeat domain protein [Rickettsia endosymbiont of
           Ixodes scapularis]
 gi|378934605|gb|AFC73106.1| hypothetical protein MCI_00705 [Rickettsia montanensis str. OSU
           85-930]
          Length = 594

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 183/386 (47%), Gaps = 44/386 (11%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S  N G+  +  LA++L   Q    +  + N I   G+K    +L+ +  + TLNL  N
Sbjct: 16  LSLSNIGEGDVKSLAQALKGTQITR-LDLSNNNIGCNGLKYLTQILR-DTQITTLNLKNN 73

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV---------- 278
            I DEGVK L + L +   +  L LS   +  + A+ + ++L N  +  +          
Sbjct: 74  NIMDEGVKYLTESLKE-IQITELDLSENKIGSDAAQYLNKMLSNTKMRSLYLDIHYTEDG 132

Query: 279 ------------------LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
                             + ++NN I   G   L +   +N  I  L L+     A  A 
Sbjct: 133 DVNKYISQRSYCDIKNIHITIHNNKIGIKGAQYLNKTF-QNIAIAELTLDSQNLEADDAQ 191

Query: 321 ALAKGLEGNKSLRELHLHGNSIGD-EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            LA+  +  K + EL +  N I    GI+ L+     +  ++A L++    I   G  ++
Sbjct: 192 YLAQAFKDTK-ISELKMSYNHIMQLNGIQYLVQAF--KDSQIAKLNVHAEKIRTTGVKYL 248

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE++K  K +L ++L +N IGDEG + +A ALK N  I  IDL  ++I ++GA  +A +L
Sbjct: 249 AEFLKEVK-VLDLDLRLNYIGDEGMKYLAPALK-NSDIMYIDLAWDDIEAEGARYLAEIL 306

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           + NS I  +DL  N IGADGA+ L++ L +   +  + L    I  +G +++ D++  N 
Sbjct: 307 Q-NSKILFIDLCNNSIGADGARYLADGLPY-SQVTGIHLHGNMIEYAGYQYLIDVVD-NT 363

Query: 500 TISILDLRANGLR---DEGAKCLAQS 522
            IS ++L  N +    +EG K    S
Sbjct: 364 NISWVNLHCNNIETGLEEGTKLWPYS 389



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 33/353 (9%)

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K + D L DN     L LS++   D   K++A+ LK   I R L+L+NN I  +G   L 
Sbjct: 4   KTMIDNLKDNHS---LSLSNIGEGD--VKSLAQALKGTQITR-LDLSNNNIGCNGLKYLT 57

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           + +L ++ I +L+L  N     G   L + L+    + EL L  N IG +  + L   LS
Sbjct: 58  Q-ILRDTQITTLNLKNNNIMDEGVKYLTESLK-EIQITELDLSENKIGSDAAQYLNKMLS 115

Query: 356 SRKGKLAVLDIG-------NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           + K +   LDI        N  IS +        IKN    + I ++ N IG +GA+ + 
Sbjct: 116 NTKMRSLYLDIHYTEDGDVNKYISQRSYCD----IKN----IHITIHNNKIGIKGAQYLN 167

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI-GADGAKALSEVL 467
               QN  I  + L   N+ +  A  +A+  KD + I+ L ++YN I   +G + L +  
Sbjct: 168 KTF-QNIAIAELTLDSQNLEADDAQYLAQAFKD-TKISELKMSYNHIMQLNGIQYLVQAF 225

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
           K    I  L +   +I  +G +++A+ L+    +  LDLR N + DEG K LA + K  N
Sbjct: 226 K-DSQIAKLNVHAEKIRTTGVKYLAEFLKEVKVLD-LDLRLNYIGDEGMKYLAPALK--N 281

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
             +  IDLA+++I  +GA  +A+ L+ ++   +  ++L NN +   G   L D
Sbjct: 282 SDIMYIDLAWDDIEAEGARYLAEILQNSK---ILFIDLCNNSIGADGARYLAD 331



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 170/360 (47%), Gaps = 15/360 (4%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS + IG+  VK L   L     + RL LS+ ++   G K + ++L++  I  +   NNN
Sbjct: 16  LSLSNIGEGDVKSLAQAL-KGTQITRLDLSNNNIGCNGLKYLTQILRDTQITTLNLKNNN 74

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           ++D  G   L E+L E   I  L L+ N  G+  A  L K L  N  +R L+L  +   D
Sbjct: 75  IMD-EGVKYLTESLKE-IQITELDLSENKIGSDAAQYLNKML-SNTKMRSLYLDIHYTED 131

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
             +   +S  S    K   + I NN I  KGA ++ +  +N  ++  + L   ++  + A
Sbjct: 132 GDVNKYISQRSYCDIKNIHITIHNNKIGIKGAQYLNKTFQNI-AIAELTLDSQNLEADDA 190

Query: 405 EKIADALKQNRTITTIDLGGNNIHS-KGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           + +A A K  + I+ + +  N+I    G   + +  KD S I  L++    I   G K L
Sbjct: 191 QYLAQAFKDTK-ISELKMSYNHIMQLNGIQYLVQAFKD-SQIAKLNVHAEKIRTTGVKYL 248

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
           +E LK    +  L L    IG  G +++A  L+ N+ I  +DL  + +  EGA+ LA+  
Sbjct: 249 AEFLK-EVKVLDLDLRLNYIGDEGMKYLAPALK-NSDIMYIDLAWDDIEAEGARYLAEIL 306

Query: 524 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
           +  N  +  IDL  N I  DGA  +A  L  ++   VT ++L  N +   G   L D  D
Sbjct: 307 Q--NSKILFIDLCNNSIGADGARYLADGLPYSQ---VTGIHLHGNMIEYAGYQYLIDVVD 361



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 153/319 (47%), Gaps = 37/319 (11%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           +++++   N  DEG+ +L ESL   Q   E+  + N I +   +  + +L SN  +++L 
Sbjct: 66  TTLNLKNNNIMDEGVKYLTESLKEIQIT-ELDLSENKIGSDAAQYLNKML-SNTKMRSLY 123

Query: 225 LSGNPIGDEGV------KCLCDI----------------------LVDNAGVERLQLSSV 256
           L  +   D  V      +  CDI                         N  +  L L S 
Sbjct: 124 LDIHYTEDGDVNKYISQRSYCDIKNIHITIHNNKIGIKGAQYLNKTFQNIAIAELTLDSQ 183

Query: 257 DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
           +L  + A+ +A+  K+  I  +    N+++  +G   L +A  ++S I  L+++      
Sbjct: 184 NLEADDAQYLAQAFKDTKISELKMSYNHIMQLNGIQYLVQA-FKDSQIAKLNVHAEKIRT 242

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
            G   LA+ L+  K L +L L  N IGDEG++ L   L  +   +  +D+  + I A+GA
Sbjct: 243 TGVKYLAEFLKEVKVL-DLDLRLNYIGDEGMKYLAPAL--KNSDIMYIDLAWDDIEAEGA 299

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            ++AE ++N K +L+I+L  N IG +GA  +AD L  ++ +T I L GN I   G   + 
Sbjct: 300 RYLAEILQNSK-ILFIDLCNNSIGADGARYLADGLPYSQ-VTGIHLHGNMIEYAGYQYLI 357

Query: 437 RVLKDNSVITSLDLAYNPI 455
            V+ DN+ I+ ++L  N I
Sbjct: 358 DVV-DNTNISWVNLHCNNI 375


>gi|399497880|emb|CCG20268.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E +  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEASSAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K  +   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLFQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  +  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|432100119|gb|ELK29008.1| NACHT, LRR and PYD domains-containing protein 12 [Myotis davidii]
          Length = 999

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 147/317 (46%), Gaps = 8/317 (2%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKN 272
           L SN  L  L L  N +G +GVK LC  L   N  ++ L+L    +     + +A  L  
Sbjct: 647 LSSNPNLIELALHHNALGSQGVKLLCQGLRHPNCKLQNLRLKRCRVPSAACQDLAAALAA 706

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           N  L  ++L++N +   G   L E L      ++ L L      A     +A  L  N+ 
Sbjct: 707 NKNLMRMDLSSNALGLPGVRLLCEGLRHPKCRLQMLQLRKCQLEAGAGQEVASVLSSNRH 766

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           L EL L GN++ D G+R L  GL     +L +L +    ++A     +A  +   +SL+ 
Sbjct: 767 LVELDLTGNALEDTGLRRLCEGLRHPVCRLQILWLKICHLTAAACEDLASTLPVNQSLME 826

Query: 392 INLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           ++L +ND+GD G   + + L+  +  + T+ LG   + S     +A VL+ N  +  LDL
Sbjct: 827 LDLGLNDLGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLAAVLQSNRHLRELDL 886

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGW---CQIGASGAEFVADMLRYNNTISILDLR 507
           ++N +G  G   L E L+ H      KL W   C + A   E ++  L  N T++ L L 
Sbjct: 887 SFNDLGDRGMWWLCEGLQ-HPTCRLQKL-WLDSCGLTAKSCEDLSSTLGVNQTLTELYLT 944

Query: 508 ANGLRDEGAKCLAQSFK 524
            N L + G + L +  +
Sbjct: 945 NNALGNTGVRRLCKRLR 961



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 5/267 (1%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
           N  L  ++LS N +G  GV+ LC+ L      ++ LQL    L     + +A +L +N  
Sbjct: 707 NKNLMRMDLSSNALGLPGVRLLCEGLRHPKCRLQMLQLRKCQLEAGAGQEVASVLSSNRH 766

Query: 276 LRVLELNNNMIDYSGFTSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           L  L+L  N ++ +G   L E L      ++ L L   +  A     LA  L  N+SL E
Sbjct: 767 LVELDLTGNALEDTGLRRLCEGLRHPVCRLQILWLKICHLTAAACEDLASTLPVNQSLME 826

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N +GD G+  L  GL   + KL  L +G   +S+     +A  +++ + L  ++L
Sbjct: 827 LDLGLNDLGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLAAVLQSNRHLRELDL 886

Query: 395 YMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
             ND+GD G   + + L+     +  + L    + +K    ++  L  N  +T L L  N
Sbjct: 887 SFNDLGDRGMWWLCEGLQHPTCRLQKLWLDSCGLTAKSCEDLSSTLGVNQTLTELYLTNN 946

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGW 480
            +G  G + L + L+  G    L++ W
Sbjct: 947 ALGNTGVRRLCKRLRHPG--CKLRVLW 971



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 140/320 (43%), Gaps = 5/320 (1%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGA 316
           L D  +  +A  L +N  L  L L++N +   G   L + L   N  +++L L      +
Sbjct: 635 LPDAYSDQLATALSSNPNLIELALHHNALGSQGVKLLCQGLRHPNCKLQNLRLKRCRVPS 694

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                LA  L  NK+L  + L  N++G  G+R L  GL   K +L +L +    + A   
Sbjct: 695 AACQDLAAALAANKNLMRMDLSSNALGLPGVRLLCEGLRHPKCRLQMLQLRKCQLEAGAG 754

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
             VA  + + + L+ ++L  N + D G  ++ + L+     +  + L   ++ +     +
Sbjct: 755 QEVASVLSSNRHLVELDLTGNALEDTGLRRLCEGLRHPVCRLQILWLKICHLTAAACEDL 814

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADM 494
           A  L  N  +  LDL  N +G  G   L E L+     + TL+LG C++ ++  E +A +
Sbjct: 815 ASTLPVNQSLMELDLGLNDLGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLAAV 874

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L+ N  +  LDL  N L D G   L +  +     L  + L    +       ++  L  
Sbjct: 875 LQSNRHLRELDLSFNDLGDRGMWWLCEGLQHPTCRLQKLWLDSCGLTAKSCEDLSSTLGV 934

Query: 555 NEDVAVTSLNLANNFLTKFG 574
           N+   +T L L NN L   G
Sbjct: 935 NQ--TLTELYLTNNALGNTG 952



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 5/207 (2%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIAL 220
           R    +D++G    D GL  L E L +     ++ +     +TAA  +     L  N +L
Sbjct: 765 RHLVELDLTGNALEDTGLRRLCEGLRHPVCRLQILWLKICHLTAAACEDLASTLPVNQSL 824

Query: 221 KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L+L  N +GD GV  LC+ L      ++ L+L    L     + +A +L++N  LR L
Sbjct: 825 MELDLGLNDLGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLAAVLQSNRHLREL 884

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIR--SLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +L+ N +   G   L E L ++ T R   L L+     A     L+  L  N++L EL+L
Sbjct: 885 DLSFNDLGDRGMWWLCEGL-QHPTCRLQKLWLDSCGLTAKSCEDLSSTLGVNQTLTELYL 943

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVL 364
             N++G+ G+R L   L     KL VL
Sbjct: 944 TNNALGNTGVRRLCKRLRHPGCKLRVL 970


>gi|395832442|ref|XP_003789280.1| PREDICTED: T-complex-associated testis-expressed protein 1
           [Otolemur garnettii]
          Length = 497

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 98/187 (52%), Gaps = 2/187 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  Y    SLA  +    T++   L  +      A  L + L  +  L EL L 
Sbjct: 252 FEWNLFLFTYRDCHSLAATIKACLTLKIFRLTRSKVDDDKARILIRSLLDHPVLEELDLS 311

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G R     LS    +L VL++ NN + A GA  +A  + +  SL+ +NL +N 
Sbjct: 312 HNLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTSLISLNLRLNC 369

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + +A AL  N+ +TT+ LGGN +    A+ +A+VL  N+ +TS++L+ N IG D
Sbjct: 370 IEDEGGQALAHALHTNKCLTTLHLGGNELSEPTATLLAQVLSTNTTLTSINLSCNHIGLD 429

Query: 459 GAKALSE 465
           G K L E
Sbjct: 430 GGKQLLE 436



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 107/213 (50%), Gaps = 2/213 (0%)

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
           T     +    +++ + LK   L+ + + D+  + L   L+D+  +E L LS   + D G
Sbjct: 260 TYRDCHSLAATIKACLTLKIFRLTRSKVDDDKARILIRSLLDHPVLEELDLSHNLIGDRG 319

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A+  A+LL ++S LRVL L NN +   G  SLA AL  N+++ SL+L  N     G  AL
Sbjct: 320 ARGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTSLISLNLRLNCIEDEGGQAL 378

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A  L  NK L  LHL GN +  E    L++ + S    L  +++  N I   G   + E 
Sbjct: 379 AHALHTNKCLTTLHLGGNELS-EPTATLLAQVLSTNTTLTSINLSCNHIGLDGGKQLLEG 437

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           + + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 438 MSDNKTLLEFDLRLSDVAQESEYLIGQALNANR 470



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 12/215 (5%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+    L  + +    A  + R L D+
Sbjct: 245 VKDCGMNFEWNLFLFTYRD--CHSLAATIKACLTLKIFRLTRSKVDDDKARILIRSLLDH 302

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL++N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N ++ 
Sbjct: 303 PVLEELDLSHNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTSLI 361

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L+LR N + DEG + LA +    N+ LT++ L  NE+ +  A  +AQ L  N    +TS
Sbjct: 362 SLNLRLNCIEDEGGQALAHALHT-NKCLTTLHLGGNELSEPTATLLAQVLSTN--TTLTS 418

Query: 563 LNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
           +NL+ N +       L   K L+  MS+ +  + F
Sbjct: 419 INLSCNHI------GLDGGKQLLEGMSDNKTLLEF 447



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 2/211 (0%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R L+  L      L  LD+ +N I  +GA  
Sbjct: 264 CHSLAATIKACLTLKIFRLTRSKVDDDKARILIRSLLDHP-VLEELDLSHNLIGDRGARG 322

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N ++ +++L  N I  +G  A+A  
Sbjct: 323 AAKLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTSLISLNLRLNCIEDEGGQALAHA 381

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  N  +T+L L  N +    A  L++VL  +  + ++ L    IG  G + + + +  N
Sbjct: 382 LHTNKCLTTLHLGGNELSEPTATLLAQVLSTNTTLTSINLSCNHIGLDGGKQLLEGMSDN 441

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
            T+   DLR + +  E    + Q+     EA
Sbjct: 442 KTLLEFDLRLSDVAQESEYLIGQALNANREA 472



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 252 FEWNLFLFTYRDCHSLAATIKACLTLKIFRLTRSKVDDDKARILIRSLLDHPVLEELDLS 311

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +    +L S+  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 312 HNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTSLISLNLRLNCI 370

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L  N  L  L L  N +     T LA+ L  N+T+ S++L+ N+ G  G
Sbjct: 371 EDEGGQALAHALHTNKCLTTLHLGGNELSEPTATLLAQVLSTNTTLTSINLSCNHIGLDG 430

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 431 GKQLLEGMSDNKTLLEFDLRLSDVAQE 457



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 2/189 (1%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A  IK C +L    L  + + D+ A  +  +L  +  +  +DL  N I  +GA   A++
Sbjct: 267 LAATIKACLTLKIFRLTRSKVDDDKARILIRSLLDHPVLEELDLSHNLIGDRGARGAAKL 326

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  +S +  L+LA N + A GA++L+  L  + ++ +L L    I   G + +A  L  N
Sbjct: 327 LS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTSLISLNLRLNCIEDEGGQALAHALHTN 385

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
             ++ L L  N L +  A  LAQ     N  LTSI+L+ N I  DG   + + +  N+ +
Sbjct: 386 KCLTTLHLGGNELSEPTATLLAQVLST-NTTLTSINLSCNHIGLDGGKQLLEGMSDNKTL 444

Query: 559 AVTSLNLAN 567
               L L++
Sbjct: 445 LEFDLRLSD 453


>gi|399497886|emb|CCG20271.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +D  G ++L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSALCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +     + G +AL + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSALCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+K L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGSK-LKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G SA+   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSALCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G  A    L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSALCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498


>gi|224586734|dbj|BAH24204.1| nucleotide-binding oligomerization domain containing 2 [Sus scrofa]
          Length = 1013

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 121/235 (51%), Gaps = 6/235 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  NS+GD G+  L+  L+  K     L + +N+IS +G   + E+   C+ L  + L
Sbjct: 768 LQLDHNSVGDIGVEQLLPCLNVCKA----LYLRDNNISDRGFCKLVEHALRCEQLQKLAL 823

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N + D  A  +A  L   R    + LG N+  + GA  +A+ L+ N+ +  L    N 
Sbjct: 824 FNNKLTDGCAHSMARLLACKRNFLALRLGNNHFTAVGAQVLAQGLRANTSLQFLGFWGNQ 883

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G  GA+AL+E L+ + ++  L L    IG+ GA+ +A ML  N  +  L L  N ++DE
Sbjct: 884 VGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQALALMLEKNMALEELCLEENHVQDE 943

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
           G   LA+  +  N +L  + L+ N +   GA A+ QAL+ N+ +    L   NNF
Sbjct: 944 GVCSLARGLE-RNSSLKVLKLSNNHVTSRGAEALLQALEQNDTILEVWLR-GNNF 996



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 142/279 (50%), Gaps = 4/279 (1%)

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            V    V  L+L+   +      A+A +L++      L+L++N +   G   L   L   +
Sbjct: 732  VSRLNVGHLKLTFCSVGPAECAALAFVLRHLRWPVALQLDHNSVGDIGVEQLLPCL---N 788

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
              ++L+L  N     G   L +     + L++L L  N + D    ++   L+ ++  LA
Sbjct: 789  VCKALYLRDNNISDRGFCKLVEHALRCEQLQKLALFNNKLTDGCAHSMARLLACKRNFLA 848

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +GNN  +A GA  +A+ ++   SL ++  + N +GD+GA+ +A+AL+ N+++  + L
Sbjct: 849  -LRLGNNHFTAVGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSL 907

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             GNNI S GA A+A +L+ N  +  L L  N +  +G  +L+  L+ + ++  LKL    
Sbjct: 908  VGNNIGSVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNH 967

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            + + GAE +   L  N+TI  + LR N    E  + L+Q
Sbjct: 968  VTSRGAEALLQALEQNDTILEVWLRGNNFSPEETEQLSQ 1006



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 81/151 (53%)

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N  TA G +     L++N +L+ L   GN +GD+G + L + L DN  ++ L L   ++ 
Sbjct: 854  NHFTAVGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSLVGNNIG 913

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
              GA+A+A +L+ N  L  L L  N +   G  SLA  L  NS+++ L L+ N+  + GA
Sbjct: 914  SVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGA 973

Query: 320  NALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             AL + LE N ++ E+ L GN+   E    L
Sbjct: 974  EALLQALEQNDTILEVWLRGNNFSPEETEQL 1004



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 88/174 (50%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++       R F ++ +   +F   G   LA+ L  N + + + F 
Sbjct: 821 LALFNNKLTDGCAHSMARLLACKRNFLALRLGNNHFTAVGAQVLAQGLRANTSLQFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A    L+ N +LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNQVGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQALALMLEKNMALEELCLEENHV 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +DEG  ++A  L+ NS L+VL+L+NN +   G  +L +AL +N TI  + L GN
Sbjct: 941 QDEGVCSLARGLERNSSLKVLKLSNNHVTSRGAEALLQALEQNDTILEVWLRGN 994



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 85/197 (43%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G   L E     +  ++++   N +T     +   +L        L L  N    
Sbjct: 799 NISDRGFCKLVEHALRCEQLQKLALFNNKLTDGCAHSMARLLACKRNFLALRLGNNHFTA 858

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L   L  N  ++ L      + D+GA+A+AE L++N  L+ L L  N I   G  
Sbjct: 859 VGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQ 918

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA  L +N  +  L L  N+    G  +LA+GLE N SL+ L L  N +   G  AL+ 
Sbjct: 919 ALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGAEALLQ 978

Query: 353 GLSSRKGKLAVLDIGNN 369
            L      L V   GNN
Sbjct: 979 ALEQNDTILEVWLRGNN 995


>gi|157827405|ref|YP_001496469.1| hypothetical protein A1I_05525 [Rickettsia bellii OSU 85-389]
 gi|157802709|gb|ABV79432.1| Leucine-rich repeat protein [Rickettsia bellii OSU 85-389]
          Length = 594

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 183/387 (47%), Gaps = 44/387 (11%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S  N G+  +  LA++L   Q    +  + N I   G+K    +L+ +  + TLNL  N
Sbjct: 16  LSLSNIGEGDVKSLAQALKGTQITR-LDLSNNNIGCNGLKYLTQILR-DTQITTLNLKNN 73

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV---------- 278
            I DEGVK L + L +   +  L LS   +  + A+ + ++L N  +  +          
Sbjct: 74  NIMDEGVKYLTESLKE-IQITELDLSENKIGSDAAQYLNKMLSNTKMRSLYLDIHYTEDG 132

Query: 279 ------------------LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
                             + ++NN I   G   L +   +N  I  L L+     A  A 
Sbjct: 133 DVNKYISQRSYCDIKNIHITIHNNKIGIKGAQYLNKTF-QNIAIAELTLDSQNLEADDAQ 191

Query: 321 ALAKGLEGNKSLRELHLHGNSIGD-EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            LA+  +  K + EL +  N I    GI+ L+     +  ++A L++    I   G  ++
Sbjct: 192 YLAQAFKDTK-ISELKMSYNHIMQLNGIQYLVQAF--KDSQIAKLNVHAEKIRTTGVKYL 248

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           AE++K  K +L ++L +N IGDEG + +A ALK N  I  IDL  ++I ++GA  +A +L
Sbjct: 249 AEFLKEVK-VLDLDLRLNYIGDEGMKYLAPALK-NSDIMYIDLAWDDIEAEGARYLAEIL 306

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           + NS I  +DL  N IGADGA+ L++ L +   +  + L    I  +G +++ D++  N 
Sbjct: 307 Q-NSKILFIDLCNNSIGADGARYLADGLPY-SQVTGIHLHGNMIEYAGYQYLIDVVD-NT 363

Query: 500 TISILDLRANGLR---DEGAKCLAQSF 523
            IS ++L  N +    +EG K    S 
Sbjct: 364 NISWVNLHCNNIETGLEEGTKLWPYSI 390



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 33/353 (9%)

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K + D L DN     L LS++   D   K++A+ LK   I R L+L+NN I  +G   L 
Sbjct: 4   KTMIDNLKDNHS---LSLSNIGEGD--VKSLAQALKGTQITR-LDLSNNNIGCNGLKYLT 57

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
           + +L ++ I +L+L  N     G   L + L+    + EL L  N IG +  + L   LS
Sbjct: 58  Q-ILRDTQITTLNLKNNNIMDEGVKYLTESLK-EIQITELDLSENKIGSDAAQYLNKMLS 115

Query: 356 SRKGKLAVLDIG-------NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           + K +   LDI        N  IS +        IKN    + I ++ N IG +GA+ + 
Sbjct: 116 NTKMRSLYLDIHYTEDGDVNKYISQRSYCD----IKN----IHITIHNNKIGIKGAQYLN 167

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI-GADGAKALSEVL 467
               QN  I  + L   N+ +  A  +A+  KD + I+ L ++YN I   +G + L +  
Sbjct: 168 KTF-QNIAIAELTLDSQNLEADDAQYLAQAFKD-TKISELKMSYNHIMQLNGIQYLVQAF 225

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
           K    I  L +   +I  +G +++A+ L+    +  LDLR N + DEG K LA + K  N
Sbjct: 226 K-DSQIAKLNVHAEKIRTTGVKYLAEFLKEVKVLD-LDLRLNYIGDEGMKYLAPALK--N 281

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
             +  IDLA+++I  +GA  +A+ L+ ++   +  ++L NN +   G   L D
Sbjct: 282 SDIMYIDLAWDDIEAEGARYLAEILQNSK---ILFIDLCNNSIGADGARYLAD 331



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 170/360 (47%), Gaps = 15/360 (4%)

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS + IG+  VK L   L     + RL LS+ ++   G K + ++L++  I  +   NNN
Sbjct: 16  LSLSNIGEGDVKSLAQAL-KGTQITRLDLSNNNIGCNGLKYLTQILRDTQITTLNLKNNN 74

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD 344
           ++D  G   L E+L E   I  L L+ N  G+  A  L K L  N  +R L+L  +   D
Sbjct: 75  IMD-EGVKYLTESLKE-IQITELDLSENKIGSDAAQYLNKML-SNTKMRSLYLDIHYTED 131

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
             +   +S  S    K   + I NN I  KGA ++ +  +N  ++  + L   ++  + A
Sbjct: 132 GDVNKYISQRSYCDIKNIHITIHNNKIGIKGAQYLNKTFQNI-AIAELTLDSQNLEADDA 190

Query: 405 EKIADALKQNRTITTIDLGGNNIHS-KGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           + +A A K  + I+ + +  N+I    G   + +  KD S I  L++    I   G K L
Sbjct: 191 QYLAQAFKDTK-ISELKMSYNHIMQLNGIQYLVQAFKD-SQIAKLNVHAEKIRTTGVKYL 248

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
           +E LK    +  L L    IG  G +++A  L+ N+ I  +DL  + +  EGA+ LA+  
Sbjct: 249 AEFLK-EVKVLDLDLRLNYIGDEGMKYLAPALK-NSDIMYIDLAWDDIEAEGARYLAEIL 306

Query: 524 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
           +  N  +  IDL  N I  DGA  +A  L  ++   VT ++L  N +   G   L D  D
Sbjct: 307 Q--NSKILFIDLCNNSIGADGARYLADGLPYSQ---VTGIHLHGNMIEYAGYQYLIDVVD 361



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 153/320 (47%), Gaps = 37/320 (11%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +++++   N  DEG+ +L ESL   Q   E+  + N I +   +  + +L SN  +++L
Sbjct: 65  ITTLNLKNNNIMDEGVKYLTESLKEIQIT-ELDLSENKIGSDAAQYLNKML-SNTKMRSL 122

Query: 224 NLSGNPIGDEGV------KCLCDI----------------------LVDNAGVERLQLSS 255
            L  +   D  V      +  CDI                         N  +  L L S
Sbjct: 123 YLDIHYTEDGDVNKYISQRSYCDIKNIHITIHNNKIGIKGAQYLNKTFQNIAIAELTLDS 182

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            +L  + A+ +A+  K+  I  +    N+++  +G   L +A  ++S I  L+++     
Sbjct: 183 QNLEADDAQYLAQAFKDTKISELKMSYNHIMQLNGIQYLVQA-FKDSQIAKLNVHAEKIR 241

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
             G   LA+ L+  K L +L L  N IGDEG++ L   L  +   +  +D+  + I A+G
Sbjct: 242 TTGVKYLAEFLKEVKVL-DLDLRLNYIGDEGMKYLAPAL--KNSDIMYIDLAWDDIEAEG 298

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           A ++AE ++N K +L+I+L  N IG +GA  +AD L  ++ +T I L GN I   G   +
Sbjct: 299 ARYLAEILQNSK-ILFIDLCNNSIGADGARYLADGLPYSQ-VTGIHLHGNMIEYAGYQYL 356

Query: 436 ARVLKDNSVITSLDLAYNPI 455
             V+ DN+ I+ ++L  N I
Sbjct: 357 IDVV-DNTNISWVNLHCNNI 375


>gi|198437939|ref|XP_002125774.1| PREDICTED: similar to LOC496076 protein [Ciona intestinalis]
          Length = 377

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 131/273 (47%), Gaps = 38/273 (13%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGN-------PIGDEGVKCLCDILVDNAGVERLQLS 254
           I A    A D +L +   LK L+L+GN        +GD+ V+ LC IL  +  +  L L 
Sbjct: 29  INALVKSAKDFLLSTTNELK-LDLAGNNKLMTDKRLGDKDVEVLCAILGKSTALTSLDLR 87

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
             +L D+ A +I++L+K    L+ L +  N     G   +AEALL + T+RSL +NGN  
Sbjct: 88  YNNLTDDAAPSISKLIKETPSLKELNIMCNDFTEKGAEHIAEALLTSQTLRSLKVNGNKI 147

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G    A+ L+ N  LRE                             LD+G+  +  +
Sbjct: 148 GNRGGMYFAQALQINNKLRE-----------------------------LDLGDCDLE-E 177

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
              HV   +K   +L  I+L   D+ D G E++ D L  N ++  ++L  N I   GA+ 
Sbjct: 178 CVVHVGRMLKVNHTLREIHLAKFDMKDFGVERLCDGLYDNFSLGYLNLSCNRITRDGAAV 237

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           +A++L+ N+ +  LDL +N I  DGAK ++  L
Sbjct: 238 LAKLLRRNTPLEILDLGFNRIEEDGAKHIASAL 270



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 32/258 (12%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            N L   L GN  L    +    +GD+ +  L + L  +   L  LD+  N+++   A  
Sbjct: 44  TNELKLDLAGNNKL----MTDKRLGDKDVEVLCAILG-KSTALTSLDLRYNNLTDDAAPS 98

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA-- 436
           +++ IK   SL  +N+  ND  ++GAE IA+AL  ++T+ ++ + GN I ++G    A  
Sbjct: 99  ISKLIKETPSLKELNIMCNDFTEKGAEHIAEALLTSQTLRSLKVNGNKIGNRGGMYFAQA 158

Query: 437 -------------------------RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
                                    R+LK N  +  + LA   +   G + L + L  + 
Sbjct: 159 LQINNKLRELDLGDCDLEECVVHVGRMLKVNHTLREIHLAKFDMKDFGVERLCDGLYDNF 218

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALT 531
           ++  L L   +I   GA  +A +LR N  + ILDL  N + ++GAK +A +    N  L 
Sbjct: 219 SLGYLNLSCNRITRDGAAVLAKLLRRNTPLEILDLGFNRIEEDGAKHIASALSTSNSNLK 278

Query: 532 SIDLAFNEIRDDGAFAIA 549
           ++ +  N I+ +G  ++A
Sbjct: 279 ALVVVSNCIQGNGIVSLA 296



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 118/254 (46%), Gaps = 3/254 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A +S+D+   N  D+    +++ +    + +E++   N  T  G +     L ++  L++
Sbjct: 80  ALTSLDLRYNNLTDDAAPSISKLIKETPSLKELNIMCNDFTEKGAEHIAEALLTSQTLRS 139

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L ++GN IG+ G       L  N  +  L L   DL +E    +  +LK N  LR + L 
Sbjct: 140 LKVNGNKIGNRGGMYFAQALQINNKLRELDLGDCDL-EECVVHVGRMLKVNHTLREIHLA 198

Query: 283 N-NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             +M D+ G   L + L +N ++  L+L+ N     GA  LAK L  N  L  L L  N 
Sbjct: 199 KFDMKDF-GVERLCDGLYDNFSLGYLNLSCNRITRDGAAVLAKLLRRNTPLEILDLGFNR 257

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I ++G + + S LS+    L  L + +N I   G   +A  +    SL  + ++ ND+ +
Sbjct: 258 IEEDGAKHIASALSTSNSNLKALVVVSNCIQGNGIVSLASSLNTNSSLSNLYIWGNDLDE 317

Query: 402 EGAEKIADALKQNR 415
              + + + ++  R
Sbjct: 318 NACKAMGELIRSRR 331



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 8/182 (4%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +GD+  E +   L ++  +T++DL  NN+    A +I++++K+   +  L++  N     
Sbjct: 63  LGDKDVEVLCAILGKSTALTSLDLRYNNLTDDAAPSISKLIKETPSLKELNIMCNDFTEK 122

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA+ ++E L     + +LK+   +IG  G  + A  L+ NN +  LDL    L +    C
Sbjct: 123 GAEHIAEALLTSQTLRSLKVNGNKIGNRGGMYFAQALQINNKLRELDLGDCDLEE----C 178

Query: 519 LAQSFKV--VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 576
           +    ++  VN  L  I LA  +++D G   +   L  N   ++  LNL+ N +T+ G +
Sbjct: 179 VVHVGRMLKVNHTLREIHLAKFDMKDFGVERLCDGLYDN--FSLGYLNLSCNRITRDGAA 236

Query: 577 AL 578
            L
Sbjct: 237 VL 238


>gi|149634061|ref|XP_001512159.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Ornithorhynchus anatinus]
          Length = 950

 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 7/240 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G++ L    S    +L VL +  N I+  G   + E +   K + ++ LY N I D GA+
Sbjct: 716 GVKELRPCFS----RLTVLRLSVNQITDTGVKVLYEELTKYKIVTFLGLYNNQITDVGAK 771

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  + +  ++T + LG N I S+G   +A  ++ +  I  + +  N IG +GAKA +E
Sbjct: 772 YLARLMDECSSLTHLKLGANKITSEGGKCLALAVQKSKSIFEIGMWGNKIGDEGAKAFAE 831

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I   G + +A  L++N ++ I  L  N L DE A+  A+  + 
Sbjct: 832 ALRNHPSLTNLSLAFNGISTEGGKSIAQALQHNTSVRIFWLTKNELDDEVAESFAEMLE- 890

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
           VN+ LT + L  N+I   G   +A AL+ N  +    LN   N ++        D K +V
Sbjct: 891 VNQTLTHLWLIQNQITARGTTCLAGALQKNTGILEICLN--GNLISPEEAKTFEDEKRIV 948



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 1/186 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N I D G++ L   L+  K  +  L + NN I+  GA ++A  +  C SL  + L
Sbjct: 730 LRLSVNQITDTGVKVLYEELTKYK-IVTFLGLYNNQITDVGAKYLARLMDECSSLTHLKL 788

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A++++++I  I + GN I  +GA A A  L+++  +T+L LA+N 
Sbjct: 789 GANKITSEGGKCLALAVQKSKSIFEIGMWGNKIGDEGAKAFAEALRNHPSLTNLSLAFNG 848

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           I  +G K++++ L+ + ++    L   ++    AE  A+ML  N T++ L L  N +   
Sbjct: 849 ISTEGGKSIAQALQHNTSVRIFWLTKNELDDEVAESFAEMLEVNQTLTHLWLIQNQITAR 908

Query: 515 GAKCLA 520
           G  CLA
Sbjct: 909 GTTCLA 914



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 84/170 (49%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  +LA  +    +   +   AN IT+ G K     +Q + ++  + + GN IGDEG 
Sbjct: 767 DVGAKYLARLMDECSSLTHLKLGANKITSEGGKCLALAVQKSKSIFEIGMWGNKIGDEGA 826

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L ++  +  L L+   +  EG K+IA+ L++N+ +R+  L  N +D     S A
Sbjct: 827 KAFAEALRNHPSLTNLSLAFNGISTEGGKSIAQALQHNTSVRIFWLTKNELDDEVAESFA 886

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T+  L L  N   A G   LA  L+ N  + E+ L+GN I  E
Sbjct: 887 EMLEVNQTLTHLWLIQNQITARGTTCLAGALQKNTGILEICLNGNLISPE 936



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 93/215 (43%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            KELR      + + +S     D G+  L E L   +    +    N IT  G K    +
Sbjct: 717 VKELRPCFSRLTVLRLSVNQITDTGVKVLYEELTKYKIVTFLGLYNNQITDVGAKYLARL 776

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           +    +L  L L  N I  EG KCL   +  +  +  + +    + DEGAKA AE L+N+
Sbjct: 777 MDECSSLTHLKLGANKITSEGGKCLALAVQKSKSIFEIGMWGNKIGDEGAKAFAEALRNH 836

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L  N I   G  S+A+AL  N+++R   L  N      A + A+ LE N++L 
Sbjct: 837 PSLTNLSLAFNGISTEGGKSIAQALQHNTSVRIFWLTKNELDDEVAESFAEMLEVNQTLT 896

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I   G   L   L    G L +   GN
Sbjct: 897 HLWLIQNQITARGTTCLAGALQKNTGILEICLNGN 931


>gi|290986137|ref|XP_002675781.1| leucine-rich repeat-containing protein [Naegleria gruberi]
 gi|284089379|gb|EFC43037.1| leucine-rich repeat-containing protein [Naegleria gruberi]
          Length = 454

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 166/343 (48%), Gaps = 20/343 (5%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           E  K +  L+ N + + + E   + +D        E +L    I S  L+ N  G  GAN
Sbjct: 66  EKGKEMRHLILNGNCVSMFEKRLHNLDIFPICDTLE-ILHTGFIVSCDLSYNNIGDSGAN 124

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++A+ L+ N S++ L L  NSI + G   +   L   +  L+  D   N+I  KG   +A
Sbjct: 125 SIARMLKINSSIQHLSLRSNSISERGASDIADSLKENRNLLS-FDFSYNAIEDKGGMKMA 183

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI---AR 437
           + ++   +L ++NL   D+      K+A +++ + ++  + +G    +SK   ++   A 
Sbjct: 184 DMLEENITLKFLNLSSCDLKTSSVIKLAISVRHHPSLQELRIGKTLCNSKKEESLQHLAE 243

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           + + N+VI SLDL++  I   G     + +K    +  L+LG   I  S  + +A  L  
Sbjct: 244 IFRVNTVIRSLDLSFQSISDSGINTFFQGIKLCRTLTHLRLGANCITMS-VDVIAKYLEN 302

Query: 498 NNT-ISILDLRANGLRDEG----AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
            N  I +LDL AN +  +G    AKCL     + N+ LT +DL+ N I DD    +A+ L
Sbjct: 303 PNCAIQLLDLSANRIDSDGGIQIAKCL-----IKNKTLTYLDLSGNNIGDDSLTFLAKTL 357

Query: 553 KANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNI 595
            +  +V ++ L +A N   KF Q ++    DL  E  + +V+I
Sbjct: 358 ASKNEV-LSKLFVAGN---KFNQKSIKSFDDLAKERYDLDVDI 396



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 147/320 (45%), Gaps = 14/320 (4%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S D+S  N GD G   +A  L  N + + +S  +N I+  G       L+ N  L + + 
Sbjct: 110 SCDLSYNNIGDSGANSIARMLKINSSIQHLSLRSNSISERGASDIADSLKENRNLLSFDF 169

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S N I D+G   + D+L +N  ++ L LSS DL+      +A  ++++  L+ L +   +
Sbjct: 170 SYNAIEDKGGMKMADMLEENITLKFLNLSSCDLKTSSVIKLAISVRHHPSLQELRIGKTL 229

Query: 286 ID---YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            +         LAE    N+ IRSL L+       G N   +G++  ++L  L L  N I
Sbjct: 230 CNSKKEESLQHLAEIFRVNTVIRSLDLSFQSISDSGINTFFQGIKLCRTLTHLRLGANCI 289

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
               +  +   L +    + +LD+  N I + G   +A+ +   K+L +++L  N+IGD+
Sbjct: 290 T-MSVDVIAKYLENPNCAIQLLDLSANRIDSDGGIQIAKCLIKNKTLTYLDLSGNNIGDD 348

Query: 403 GAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG-- 459
               +A  L  +N  ++ + + GN  + K   +   + K+      LD+  +    D   
Sbjct: 349 SLTFLAKTLASKNEVLSKLFVAGNKFNQKSIKSFDDLAKER---YDLDVDIHTYKTDDIF 405

Query: 460 ---AKALSEVLKFHGNINTL 476
               K + E  ++ G+I+TL
Sbjct: 406 YCTKKTIPETHQY-GDIDTL 424


>gi|399497968|emb|CCG20312.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA++LK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKLLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AIA +LK +   ++  L +A N +T
Sbjct: 369 EGAIAIANSLK-DSAPSLAVLEMAGNDIT 396


>gi|399497844|emb|CCG20250.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E +  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEASSAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K  +   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLFQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  +  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|426250363|ref|XP_004018906.1| PREDICTED: T-complex-associated testis-expressed protein 1 [Ovis
           aries]
          Length = 502

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L  
Sbjct: 258 EWNLFLFTYRDCHSLAATVKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSH 317

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 318 NLIGDRGARAAAKLLS--HSRLRVLNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNCI 375

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL  N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 376 EDEGGQALAHALHTNKCLTTLHLGGNELSEPTATLLSQVLTINTTLTSINLSCNHIGLDG 435

Query: 460 AKALSE 465
            K L E
Sbjct: 436 GKQLLE 441



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 2/197 (1%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            LK   L+ + + D+  + L   L+D+  +E L LS   + D GA+A A+LL ++S LRV
Sbjct: 281 TLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKLL-SHSRLRV 339

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L NN +   G  SLA AL  NS + SL+L  N     G  ALA  L  NK L  LHL 
Sbjct: 340 LNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNCIEDEGGQALAHALHTNKCLTTLHLG 399

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           GN +  E    L+S + +    L  +++  N I   G   + E + + K+LL  +L ++D
Sbjct: 400 GNELS-EPTATLLSQVLTINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 458

Query: 399 IGDEGAEKIADALKQNR 415
           I  E    I  AL  NR
Sbjct: 459 IAQESEYLIGQALCANR 475



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 2/189 (1%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A  +K C +L    L  + + D+ A  +  +L  +  +  +DL  N I  +GA A A++
Sbjct: 272 LAATVKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKL 331

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  +S +  L+LA N + A GA +L+  L  + N+ +L L    I   G + +A  L  N
Sbjct: 332 LS-HSRLRVLNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNCIEDEGGQALAHALHTN 390

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
             ++ L L  N L +  A  L+Q    +N  LTSI+L+ N I  DG   + + +  N+ +
Sbjct: 391 KCLTTLHLGGNELSEPTATLLSQVL-TINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTL 449

Query: 559 AVTSLNLAN 567
               L L++
Sbjct: 450 LEFDLRLSD 458



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 257 FEWNLFLFTYRDCHSLAATVKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 316

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +A   +L S+  L+ LNL+ N +   G   L   L  N+ +  L L    +
Sbjct: 317 HNLIGDRGARAAAKLL-SHSRLRVLNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNCI 375

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L  N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 376 EDEGGQALAHALHTNKCLTTLHLGGNELSEPTATLLSQVLTINTTLTSINLSCNHIGLDG 435

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + I  E
Sbjct: 436 GKQLLEGMSDNKTLLEFDLRLSDIAQE 462



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G   LA +LG+N     ++   N I   G +A    L +N  L TL+L GN + +     
Sbjct: 351 GAHSLAHALGHNSNLISLNLRLNCIEDEGGQALAHALHTNKCLTTLHLGGNELSEPTATL 410

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           L  +L  N  +  + LS   +  +G K + E + +N  L   +L  + I       + +A
Sbjct: 411 LSQVLTINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDIAQESEYLIGQA 470

Query: 298 LLEN-STIRSLHLNGNYGGALGANALAKGLE 327
           L  N    R   LN ++   L +   AKG E
Sbjct: 471 LCANREAARQRALNPSH---LMSPVTAKGPE 498


>gi|118384891|ref|XP_001025584.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89307351|gb|EAS05339.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 409

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 148/303 (48%), Gaps = 10/303 (3%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYN-QTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
            R    ++ S R   D+ L  L E+L  + +    +  + N IT  G ++   ++ +   
Sbjct: 56  FRGNDKLNFSSR-LRDKDLIILCETLQESGEIIRHIDLSYNLITDTGAESLAQLIGNCPY 114

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L++LNL GN I   G + L + L +N  +  L L S  +R  GA  I E+L  N  L  L
Sbjct: 115 LESLNLQGNDIETAGSQELANHLKENFSLRYLNLESNKIRTNGAMNIIEILFTNKNLIEL 174

Query: 280 ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALG---ANALAKGLEGNKSLREL 335
            L +N I + G   +   L  +N+T+  L+++     ++G   A   AK L+ N+S+ +L
Sbjct: 175 NLGDNDITHDGMIGITSVLNYQNNTLAVLNVDRPTYTSIGQETAIHFAKMLQSNRSVEKL 234

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI--KNCKSLLWIN 393
            L  ++   E I  +   L     KL VLD+  N IS KG   +A+Y+  + C +L  + 
Sbjct: 235 SLQKHAFNCEAIYTITEHLL-ENNKLRVLDLTANKISFKGCEALAKYLCSEYC-ALESLI 292

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N  G  GA+ IA AL + R++  +D+  N+I   G   IA  L+ N  + SL L +N
Sbjct: 293 LASNRTGHYGAKVIAQALSKTRSLVHLDMTRNDIDDNGLKMIAESLETNDSLISLKLYWN 352

Query: 454 PIG 456
             G
Sbjct: 353 HFG 355



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 149/292 (51%), Gaps = 6/292 (2%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           LN S   + D+ +  LC+ L ++  + R + LS   + D GA+++A+L+ N   L  L L
Sbjct: 62  LNFSSR-LRDKDLIILCETLQESGEIIRHIDLSYNLITDTGAESLAQLIGNCPYLESLNL 120

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I+ +G   LA  L EN ++R L+L  N     GA  + + L  NK+L EL+L  N 
Sbjct: 121 QGNDIETAGSQELANHLKENFSLRYLNLESNKIRTNGAMNIIEILFTNKNLIELNLGDND 180

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGN---NSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           I  +G+  + S L+ +   LAVL++      SI  + A H A+ +++ +S+  ++L  + 
Sbjct: 181 ITHDGMIGITSVLNYQNNTLAVLNVDRPTYTSIGQETAIHFAKMLQSNRSVEKLSLQKHA 240

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL-KDNSVITSLDLAYNPIGA 457
              E    I + L +N  +  +DL  N I  KG  A+A+ L  +   + SL LA N  G 
Sbjct: 241 FNCEAIYTITEHLLENNKLRVLDLTANKISFKGCEALAKYLCSEYCALESLILASNRTGH 300

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
            GAK +++ L    ++  L +    I  +G + +A+ L  N+++  L L  N
Sbjct: 301 YGAKVIAQALSKTRSLVHLDMTRNDIDDNGLKMIAESLETNDSLISLKLYWN 352



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 121/240 (50%), Gaps = 11/240 (4%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +D+  N I+  GA  +A+ I NC  L  +NL  NDI   G++++A+ LK+N ++  ++L 
Sbjct: 90  IDLSYNLITDTGAESLAQLIGNCPYLESLNLQGNDIETAGSQELANHLKENFSLRYLNLE 149

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN----INTLKLG 479
            N I + GA  I  +L  N  +  L+L  N I  DG   ++ VL +  N    +N  +  
Sbjct: 150 SNKIRTNGAMNIIEILFTNKNLIELNLGDNDITHDGMIGITSVLNYQNNTLAVLNVDRPT 209

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
           +  IG   A   A ML+ N ++  L L+ +    E    + +   + N  L  +DL  N+
Sbjct: 210 YTSIGQETAIHFAKMLQSNRSVEKLSLQKHAFNCEAIYTITEHL-LENNKLRVLDLTANK 268

Query: 540 IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG----QSALTDAKDLVY-EMSEKEVN 594
           I   G  A+A+ L  +E  A+ SL LA+N    +G      AL+  + LV+ +M+  +++
Sbjct: 269 ISFKGCEALAKYL-CSEYCALESLILASNRTGHYGAKVIAQALSKTRSLVHLDMTRNDID 327



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 127/284 (44%), Gaps = 17/284 (5%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +TL E  + +R    +D+S     D G   LA+ +G     E ++   N I  AG +   
Sbjct: 78  ETLQESGEIIR---HIDLSYNLITDTGAESLAQLIGNCPYLESLNLQGNDIETAGSQELA 134

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N +L+ LNL  N I   G   + +IL  N  +  L L   D+  +G   I  +L 
Sbjct: 135 NHLKENFSLRYLNLESNKIRTNGAMNIIEILFTNKNLIELNLGDNDITHDGMIGITSVLN 194

Query: 272 -NNSILRVLELNNNMIDYSGFTSL--------AEALLENSTIRSLHLNGNYGGALGANAL 322
             N+ L VL      +D   +TS+        A+ L  N ++  L L  +         +
Sbjct: 195 YQNNTLAVLN-----VDRPTYTSIGQETAIHFAKMLQSNRSVEKLSLQKHAFNCEAIYTI 249

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            + L  N  LR L L  N I  +G  AL   L S    L  L + +N     GA  +A+ 
Sbjct: 250 TEHLLENNKLRVLDLTANKISFKGCEALAKYLCSEYCALESLILASNRTGHYGAKVIAQA 309

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
           +   +SL+ +++  NDI D G + IA++L+ N ++ ++ L  N+
Sbjct: 310 LSKTRSLVHLDMTRNDIDDNGLKMIAESLETNDSLISLKLYWNH 353



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 1/152 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G E     A+ L  N++ E++S   +      I      L  N  L+ L+L+ N I  +
Sbjct: 213 IGQETAIHFAKMLQSNRSVEKLSLQKHAFNCEAIYTITEHLLENNKLRVLDLTANKISFK 272

Query: 234 GVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           G + L   L  +   +E L L+S      GAK IA+ L     L  L++  N ID +G  
Sbjct: 273 GCEALAKYLCSEYCALESLILASNRTGHYGAKVIAQALSKTRSLVHLDMTRNDIDDNGLK 332

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            +AE+L  N ++ SL L  N+ G +      K
Sbjct: 333 MIAESLETNDSLISLKLYWNHFGQMALQEFHK 364


>gi|399498020|emb|CCG20338.1| Ran GTPase activating protein 2 [Solanum sparsipilum]
          Length = 553

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA++LK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKLLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AIA +LK +   ++  L +A N +T
Sbjct: 369 EGAIAIANSLK-DSAPSLAVLEMAGNDIT 396


>gi|169264970|dbj|BAG12313.1| nucleotide-binding oligomerization domain 1 [Sus scrofa]
          Length = 953

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 111/219 (50%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   + E +   + + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----RLTVIRLSVNQITDSGVKVLYEELTKYEIVTFLGLYNNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A  L + + +  + LG N I S+G   +AR +K++  I  + +  N IG +GAKA +E
Sbjct: 775 YVARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I   G + +A  L+ N ++ I  L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTNLSLAFNGISTEGGKSLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            N+ L  + L  N+I   G   +A AL+ N  +    LN
Sbjct: 895 -NQTLKHLWLIQNQITARGTARLADALQNNTGIMEICLN 932



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   + +  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLYEELTKYEIVTFLGLYNNQITDVGARYVARILDECKG-LKCLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN +S+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++A+
Sbjct: 803 CLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQ 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITARGTARLADALQN 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I  + L  N ++ E AK      ++V
Sbjct: 923 NTGIMEICLNGNLIKPEEAKVFEDEKRIV 951



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 2/211 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L  N I D G++ L   L+  +  +  L + NN I+  GA +VA  +  CK L  + L
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYE-IVTFLGLYNNQITDVGARYVARILDECKGLKCLKL 791

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+K +R+I  + + GN I  +GA A A  L+++  +T+L LA+N 
Sbjct: 792 GKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNG 851

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           I  +G K+L++ L+ + ++    L   ++    AE +A+ML+ N T+  L L  N +   
Sbjct: 852 ISTEGGKSLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAR 911

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
           G   LA + +  N  +  I L  N I+ + A
Sbjct: 912 GTARLADALQ-NNTGIMEICLNGNLIKPEEA 941



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 113/246 (45%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK L + L     V  L L +  + D GA+ +A +L     L+ L
Sbjct: 730 LTVIRLSVNQITDSGVKVLYEELTKYEIVTFLGLYNNQITDVGARYVARILDECKGLKCL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I                               G   LA+ ++ ++S+ E+ + G
Sbjct: 790 KLGKNKITSE----------------------------GGKCLARAVKNSRSIFEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG +A    L +    L  L +  N IS +G   +A+ ++   SL    L  N++
Sbjct: 822 NQIGDEGAKAFAEALRNHPS-LTNLSLAFNGISTEGGKSLAQALQQNASLRIFWLTQNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I ++G + +A  L++N+ I  + L  N I  + 
Sbjct: 881 DDEVAESLAEMLKVNQTLKHLWLIQNQITARGTARLADALQNNTGIMEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVFED 946



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 93/202 (46%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G +    +L     LK L L 
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYEIVTFLGLYNNQITDVGARYVARILDECKGLKCLKLG 792

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 793 KNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGI 852

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA+AL +N+++R   L  N      A +LA+ L+ N++L+ L L  N I   G
Sbjct: 853 STEGGKSLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITARG 912

Query: 347 IRALMSGLSSRKGKLAVLDIGN 368
              L   L +  G + +   GN
Sbjct: 913 TARLADALQNNTGIMEICLNGN 934



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 86/170 (50%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A  L   +  + +    N IT+ G K     ++++ ++  + + GN IGDEG 
Sbjct: 770 DVGARYVARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGA 829

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L ++  +  L L+   +  EG K++A+ L+ N+ LR+  L  N +D     SLA
Sbjct: 830 KAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQQNASLRIFWLTQNELDDEVAESLA 889

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T++ L L  N   A G   LA  L+ N  + E+ L+GN I  E
Sbjct: 890 EMLKVNQTLKHLWLIQNQITARGTARLADALQNNTGIMEICLNGNLIKPE 939



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 77/153 (50%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           E +    + +       EG   LA ++  +++  EV    N I   G KAF   L+++ +
Sbjct: 782 ECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPS 841

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  L+L+ N I  EG K L   L  NA +    L+  +L DE A+++AE+LK N  L+ L
Sbjct: 842 LTNLSLAFNGISTEGGKSLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHL 901

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 902 WLIQNQITARGTARLADALQNNTGIMEICLNGN 934



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 3/139 (2%)

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
           S +T + L+ N I   G K L E L  +  +  L L   QI   GA +VA +L     + 
Sbjct: 728 SRLTVIRLSVNQITDSGVKVLYEELTKYEIVTFLGLYNNQITDVGARYVARILDECKGLK 787

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L L  N +  EG KCLA++ K  + ++  + +  N+I D+GA A A+AL+ +   ++T+
Sbjct: 788 CLKLGKNKITSEGGKCLARAVKN-SRSIFEVGMWGNQIGDEGAKAFAEALRNHP--SLTN 844

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+LA N ++  G  +L  A
Sbjct: 845 LSLAFNGISTEGGKSLAQA 863


>gi|399497884|emb|CCG20270.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E +  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEASSAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K  +   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLFQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  +  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|326432654|gb|EGD78224.1| hypothetical protein PTSG_12865 [Salpingoeca sp. ATCC 50818]
          Length = 1444

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 4/175 (2%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA A+ +N+T+  L L+ N+    GA ALA+GL+ NK++  L+LH NS+GD G  AL  
Sbjct: 3   ALAVAVKDNTTVTRLDLSSNHISPEGAAALAQGLKHNKTIARLNLHWNSLGDVGAVALAD 62

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L+        +     SI  +G   +AE +K+  ++  + L  N IGDEG   +++ LK
Sbjct: 63  ALTHNTA----VTTACTSIGLEGTVALAEMLKHNTTITALFLSDNSIGDEGVVALSEMLK 118

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            N TIT + LG N+I   GA A+A +LK N+ I  + +  N I   G  AL  V+
Sbjct: 119 HNMTITYLVLGNNSIGDLGAKALAEMLKHNTTIMEILVYTNSISPVGGAALGAVM 173



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 94/156 (60%), Gaps = 3/156 (1%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+ +N IS +GA  +A+ +K+ K++  +NL+ N +GD GA  +ADAL  N  +TT    
Sbjct: 17  LDLSSNHISPEGAAALAQGLKHNKTIARLNLHWNSLGDVGAVALADALTHNTAVTT---A 73

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
             +I  +G  A+A +LK N+ IT+L L+ N IG +G  ALSE+LK +  I  L LG   I
Sbjct: 74  CTSIGLEGTVALAEMLKHNTTITALFLSDNSIGDEGVVALSEMLKHNMTITYLVLGNNSI 133

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           G  GA+ +A+ML++N TI  + +  N +   G   L
Sbjct: 134 GDLGAKALAEMLKHNTTIMEILVYTNSISPVGGAAL 169



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 4/192 (2%)

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL 294
           ++ L   + DN  V RL LSS  +  EGA A+A+ LK+N  +  L L+ N +   G  +L
Sbjct: 1   MRALAVAVKDNTTVTRLDLSSNHISPEGAAALAQGLKHNKTIARLNLHWNSLGDVGAVAL 60

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A+AL  N+ + +        G  G  ALA+ L+ N ++  L L  NSIGDEG+ AL S +
Sbjct: 61  ADALTHNTAVTTA---CTSIGLEGTVALAEMLKHNTTITALFLSDNSIGDEGVVAL-SEM 116

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
                 +  L +GNNSI   GA  +AE +K+  +++ I +Y N I   G   +   + QN
Sbjct: 117 LKHNMTITYLVLGNNSIGDLGAKALAEMLKHNTTIMEILVYTNSISPVGGAALGAVMDQN 176

Query: 415 RTITTIDLGGNN 426
           RT+  I +  N+
Sbjct: 177 RTLKCIYIEKNS 188



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 96/172 (55%), Gaps = 6/172 (3%)

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           +A A+K N T+T +DL  N+I  +GA+A+A+ LK N  I  L+L +N +G  GA AL++ 
Sbjct: 4   LAVAVKDNTTVTRLDLSSNHISPEGAAALAQGLKHNKTIARLNLHWNSLGDVGAVALADA 63

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
           L  +  + T       IG  G   +A+ML++N TI+ L L  N + DEG   L++  K  
Sbjct: 64  LTHNTAVTT---ACTSIGLEGTVALAEMLKHNTTITALFLSDNSIGDEGVVALSEMLK-H 119

Query: 527 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           N  +T + L  N I D GA A+A+ LK N    +  + +  N ++  G +AL
Sbjct: 120 NMTITYLVLGNNSIGDLGAKALAEMLKHN--TTIMEILVYTNSISPVGGAAL 169



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 100/196 (51%), Gaps = 4/196 (2%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           LA ++  N T   +  ++N I+  G  A    L+ N  +  LNL  N +GD G   L D 
Sbjct: 4   LAVAVKDNTTVTRLDLSSNHISPEGAAALAQGLKHNKTIARLNLHWNSLGDVGAVALADA 63

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  V     +S+ L  EG  A+AE+LK+N+ +  L L++N I   G  +L+E L  N
Sbjct: 64  LTHNTAVT-TACTSIGL--EGTVALAEMLKHNTTITALFLSDNSIGDEGVVALSEMLKHN 120

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            TI  L L  N  G LGA ALA+ L+ N ++ E+ ++ NSI   G  AL + +   +  L
Sbjct: 121 MTITYLVLGNNSIGDLGAKALAEMLKHNTTIMEILVYTNSISPVGGAALGAVMDQNR-TL 179

Query: 362 AVLDIGNNSISAKGAF 377
             + I  NS +   AF
Sbjct: 180 KCIYIEKNSPATARAF 195



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 3/183 (1%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K+    + +D+S  +   EG   LA+ L +N+T   ++   N +   G  A    L  N 
Sbjct: 9   KDNTTVTRLDLSSNHISPEGAAALAQGLKHNKTIARLNLHWNSLGDVGAVALADALTHNT 68

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           A+ T   S   IG EG   L ++L  N  +  L LS   + DEG  A++E+LK+N  +  
Sbjct: 69  AVTTACTS---IGLEGTVALAEMLKHNTTITALFLSDNSIGDEGVVALSEMLKHNMTITY 125

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L NN I   G  +LAE L  N+TI  + +  N    +G  AL   ++ N++L+ +++ 
Sbjct: 126 LVLGNNSIGDLGAKALAEMLKHNTTIMEILVYTNSISPVGGAALGAVMDQNRTLKCIYIE 185

Query: 339 GNS 341
            NS
Sbjct: 186 KNS 188



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           A+A  +KDN+ +T LDL+ N I  +GA AL++ LK +  I  L L W  +G  GA  +AD
Sbjct: 3   ALAVAVKDNTTVTRLDLSSNHISPEGAAALAQGLKHNKTIARLNLHWNSLGDVGAVALAD 62

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L +N  ++     + GL  EG   LA+  K  N  +T++ L+ N I D+G  A+++ LK
Sbjct: 63  ALTHNTAVTTA-CTSIGL--EGTVALAEMLK-HNTTITALFLSDNSIGDEGVVALSEMLK 118

Query: 554 ANEDVAVTSLNLANNFLTKFGQSALTD 580
            N  + +T L L NN +   G  AL +
Sbjct: 119 HN--MTITYLVLGNNSIGDLGAKALAE 143



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 10/169 (5%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K  +  + +++   + GD G   LA++L +N     V+ A   I   G  A   +L+ N 
Sbjct: 37  KHNKTIARLNLHWNSLGDVGAVALADALTHNTA---VTTACTSIGLEGTVALAEMLKHNT 93

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            +  L LS N IGDEGV  L ++L  N  +  L L +  + D GAKA+AE+LK+N+ +  
Sbjct: 94  TITALFLSDNSIGDEGVVALSEMLKHNMTITYLVLGNNSIGDLGAKALAEMLKHNTTIME 153

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN-------YGGALGAN 320
           + +  N I   G  +L   + +N T++ +++  N       +G AL  +
Sbjct: 154 ILVYTNSISPVGGAALGAVMDQNRTLKCIYIEKNSPATARAFGAALPVD 202


>gi|326679710|ref|XP_001919301.3| PREDICTED: leucine-rich repeat-containing protein 34 [Danio rerio]
          Length = 421

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 140/301 (46%), Gaps = 32/301 (10%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           L D+    + + L+ NS ++ L+L  N I   G   +A  + ++ +++SL L  N   A 
Sbjct: 60  LTDDDMLVLTKTLEGNSAIKGLDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEAD 119

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           GA  +AK L  N +L+ L + GN IG++G   L + L      L  +D+ +  ++ +   
Sbjct: 120 GAEVIAKSLHKNITLKTLRMTGNKIGNQGAMQLATMLQI-NATLEEVDVSDCDLATQSVI 178

Query: 378 HVAEYIKNCKSLLWINL---YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
             A  + N K +  IN+    +  + +E    +A  L  N T+  + +G +++   G   
Sbjct: 179 AFAIVLMNNKRICAINVSRPLLFSLQEETTVHMAQMLVVNNTLKELHMGKHDMTDTGVET 238

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +   LK N  +  LDL  N I  DGAK LSEVLK                          
Sbjct: 239 LCEALKRNISLRYLDLCCNRITRDGAKHLSEVLK-------------------------- 272

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
              N ++ ILDL  N + D GA  L+++ K+ +  L ++ +  N+IR  G  +++ A++ 
Sbjct: 273 --QNCSLEILDLSFNCIEDVGAIHLSEAIKLPHSKLKALSVTSNKIRKGGLLSLSAAMRV 330

Query: 555 N 555
           N
Sbjct: 331 N 331



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 148/313 (47%), Gaps = 18/313 (5%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   +D+      D+G   +A  +  +++ + +    N I A G +     L  NI LKT
Sbjct: 77  AIKGLDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEADGAEVIAKSLHKNITLKT 136

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L ++GN IG++G   L  +L  NA +E + +S  DL  +   A A +L NN  +  + ++
Sbjct: 137 LRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIAFAIVLMNNKRICAINVS 196

Query: 283 NNM---IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +   +       +A+ L+ N+T++ LH+  +     G   L + L+ N SLR L L  
Sbjct: 197 RPLLFSLQEETTVHMAQMLVVNNTLKELHMGKHDMTDTGVETLCEALKRNISLRYLDLCC 256

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS-LLWINLYMND 398
           N I  +G + L S +  +   L +LD+  N I   GA H++E IK   S L  +++  N 
Sbjct: 257 NRITRDGAKHL-SEVLKQNCSLEILDLSFNCIEDVGAIHLSEAIKLPHSKLKALSVTSNK 315

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA------RVLKDNSVITSLDLAY 452
           I   G   ++ A++ N ++T I + GN        A +      R+LK+++ ++      
Sbjct: 316 IRKGGLLSLSAAMRVNSSLTHIYIWGNKHEEPVCEAFSGLMSSGRLLKEHTDVS------ 369

Query: 453 NPIGADGAKALSE 465
            P   DG   L+E
Sbjct: 370 -PYEVDGHVFLAE 381



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 127/239 (53%), Gaps = 10/239 (4%)

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           + G S+ KG    LD+  N I+ KGA H+A  I++ KSL  ++L  NDI  +GAE IA +
Sbjct: 72  LEGNSAIKG----LDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEADGAEVIAKS 127

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           L +N T+ T+ + GN I ++GA  +A +L+ N+ +  +D++   +      A + VL  +
Sbjct: 128 LHKNITLKTLRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIAFAIVLMNN 187

Query: 471 GNINTLKLGWCQIGASGAE---FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
             I  + +    + +   E    +A ML  NNT+  L +  + + D G + L ++ K  N
Sbjct: 188 KRICAINVSRPLLFSLQEETTVHMAQMLVVNNTLKELHMGKHDMTDTGVETLCEALK-RN 246

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 586
            +L  +DL  N I  DGA  +++ LK N  + +  L+L+ N +   G   L++A  L +
Sbjct: 247 ISLRYLDLCCNRITRDGAKHLSEVLKQNCSLEI--LDLSFNCIEDVGAIHLSEAIKLPH 303



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 33/267 (12%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N A+K L+L  N I D+G   +  ++ D+  ++ L L   D+  +GA+ IA+ L  N
Sbjct: 72  LEGNSAIKGLDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEADGAEVIAKSLHKN 131

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH------------------LNGNYGG 315
             L+ L +  N I   G   LA  L  N+T+  +                   +N     
Sbjct: 132 ITLKTLRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIAFAIVLMNNKRIC 191

Query: 316 ALGAN-------------ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
           A+  +              +A+ L  N +L+ELH+  + + D G+  L   L  R   L 
Sbjct: 192 AINVSRPLLFSLQEETTVHMAQMLVVNNTLKELHMGKHDMTDTGVETLCEAL-KRNISLR 250

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTID 421
            LD+  N I+  GA H++E +K   SL  ++L  N I D GA  +++A+K  +  +  + 
Sbjct: 251 YLDLCCNRITRDGAKHLSEVLKQNCSLEILDLSFNCIEDVGAIHLSEAIKLPHSKLKALS 310

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSL 448
           +  N I   G  +++  ++ NS +T +
Sbjct: 311 VTSNKIRKGGLLSLSAAMRVNSSLTHI 337



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 34/214 (15%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + D+    +   L+ N  I  +DL  N I  KGA  IA +++D+  + SLDL  N I AD
Sbjct: 60  LTDDDMLVLTKTLEGNSAIKGLDLRYNCITDKGAVHIAHLIQDSKSLQSLDLMCNDIEAD 119

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN--------- 509
           GA+ +++ L  +  + TL++   +IG  GA  +A ML+ N T+  +D+            
Sbjct: 120 GAEVIAKSLHKNITLKTLRMTGNKIGNQGAMQLATMLQINATLEEVDVSDCDLATQSVIA 179

Query: 510 ----------------------GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
                                  L++E    +AQ   VVN  L  + +  +++ D G   
Sbjct: 180 FAIVLMNNKRICAINVSRPLLFSLQEETTVHMAQML-VVNNTLKELHMGKHDMTDTGVET 238

Query: 548 IAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           + +ALK N  +++  L+L  N +T+ G   L++ 
Sbjct: 239 LCEALKRN--ISLRYLDLCCNRITRDGAKHLSEV 270


>gi|345793929|ref|XP_544412.3| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Canis lupus familiaris]
          Length = 1092

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 116/224 (51%), Gaps = 5/224 (2%)

Query: 335  LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
            L L  NS+GD G+  L+  LS  K     L + +N+IS +G   + E+  +C+ L  + L
Sbjct: 847  LQLDHNSVGDIGVEQLLPCLSVCKA----LYLRDNNISDRGICKLIEHALHCEQLQKLAL 902

Query: 395  YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            + N + D  A  +A  L   +    + LG N I + GA A+A  L+ N+ +  L    N 
Sbjct: 903  FNNKLTDGCAHSMARLLACKQNFLALRLGNNRITAAGAQALAEGLRANTSLQFLGFWGNK 962

Query: 455  IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
            +G +GA+AL+E L  H ++  L L    IG+ GA  +A ML  N  +  L L  N L+DE
Sbjct: 963  VGDEGAQALAEALGDHQSLRWLSLVGNDIGSVGARALALMLEKNVALEELCLEENHLQDE 1022

Query: 515  GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            G   LA+  +  N +L  + L+ N I   GA  + QAL+ N+ +
Sbjct: 1023 GVCSLAKGLE-RNSSLKVLKLSNNCITYLGAEGLLQALEKNDTI 1065



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 139/274 (50%), Gaps = 4/274 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L++N +   G   L   L   S  ++L
Sbjct: 816  VGHLKLTFCGVGPPECAALAFVLRHLRRPVALQLDHNSVGDIGVEQLLPCL---SVCKAL 872

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D G    M+ L + K     L +G
Sbjct: 873  YLRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTD-GCAHSMARLLACKQNFLALRLG 931

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GN+I
Sbjct: 932  NNRITAAGAQALAEGLRANTSLQFLGFWGNKVGDEGAQALAEALGDHQSLRWLSLVGNDI 991

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L+ N  +  L L  N +  +G  +L++ L+ + ++  LKL    I   G
Sbjct: 992  GSVGARALALMLEKNVALEELCLEENHLQDEGVCSLAKGLERNSSLKVLKLSNNCITYLG 1051

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            AE +   L  N+TI  + LR N    E  + L+Q
Sbjct: 1052 AEGLLQALEKNDTILEVWLRGNTFSLEEMERLSQ 1085



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 88/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A  L   Q    +    N ITAAG +A    L++N +L+ L   GN +GDEG + L + 
Sbjct: 915  MARLLACKQNFLALRLGNNRITAAGAQALAEGLRANTSLQFLGFWGNKVGDEGAQALAEA 974

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   D+   GA+A+A +L+ N  L  L L  N +   G  SLA+ L  N
Sbjct: 975  LGDHQSLRWLSLVGNDIGSVGARALALMLEKNVALEELCLEENHLQDEGVCSLAKGLERN 1034

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA  L + LE N ++ E+ L GN+   E +  L
Sbjct: 1035 SSLKVLKLSNNCITYLGAEGLLQALEKNDTILEVWLRGNTFSLEEMERL 1083



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 103/207 (49%), Gaps = 1/207 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A ++A LL        L 
Sbjct: 870  KALYLRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSMARLLACKQNFLALR 929

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G  +LAE L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 930  LGNNRITAAGAQALAEGLRANTSLQFLGFWGNKVGDEGAQALAEALGDHQSLRWLSLVGN 989

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IG  G RAL   L  +   L  L +  N +  +G   +A+ ++   SL  + L  N I 
Sbjct: 990  DIGSVGARALALML-EKNVALEELCLEENHLQDEGVCSLAKGLERNSSLKVLKLSNNCIT 1048

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNI 427
              GAE +  AL++N TI  + L GN  
Sbjct: 1049 YLGAEGLLQALEKNDTILEVWLRGNTF 1075



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 122/252 (48%), Gaps = 6/252 (2%)

Query: 159  KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI-KAFDGVLQSN 217
            + LR   ++ +   + GD G+  L   L      + +    N I+  GI K  +  L   
Sbjct: 839  RHLRRPVALQLDHNSVGDIGVEQLLPCLS---VCKALYLRDNNISDRGICKLIEHALHCE 895

Query: 218  IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
              L+ L L  N + D     +  +L        L+L +  +   GA+A+AE L+ N+ L+
Sbjct: 896  -QLQKLALFNNKLTDGCAHSMARLLACKQNFLALRLGNNRITAAGAQALAEGLRANTSLQ 954

Query: 278  VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             L    N +   G  +LAEAL ++ ++R L L GN  G++GA ALA  LE N +L EL L
Sbjct: 955  FLGFWGNKVGDEGAQALAEALGDHQSLRWLSLVGNDIGSVGARALALMLEKNVALEELCL 1014

Query: 338  HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
              N + DEG+ +L  GL  R   L VL + NN I+  GA  + + ++   ++L + L  N
Sbjct: 1015 EENHLQDEGVCSLAKGL-ERNSSLKVLKLSNNCITYLGAEGLLQALEKNDTILEVWLRGN 1073

Query: 398  DIGDEGAEKIAD 409
                E  E+++ 
Sbjct: 1074 TFSLEEMERLSQ 1085


>gi|6708468|gb|AAF25948.1|AF214560_1 RAN GTPase activating protein 2 [Arabidopsis thaliana]
          Length = 545

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 30/288 (10%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F   LQ +I L +LNLS N +G++GV+    +L   + +E L L +  +  E A+A++EL
Sbjct: 207 FSDALQGSI-LSSLNLSDNALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSEL 265

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEA-----LLEN----------------------- 301
           + +   LRVL  +NNM    G  ++AE      LLEN                       
Sbjct: 266 IPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHC 325

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           + +  L L  N  G     +L+K L   K + EL+L   ++ DEG  A+++ L      +
Sbjct: 326 THMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALKESASPI 385

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTI 420
            VL++  N I+ + A  +A  +   + L  +NL  N++ DEG  +IA+ +++ N  +  I
Sbjct: 386 EVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCIEEVNSKLQYI 445

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           D+  N I   GA A+A V+        L++  N I  +G + L E+ K
Sbjct: 446 DMSTNYIRRAGARALAHVVVKKEAFKLLNIDGNIISEEGIEELKEIFK 493



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 39/293 (13%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRA---LMSGLSSRKGKLAVLDIGNNSISAKGA 376
           N  +  L+G+  L  L+L  N++G++G+RA   L+  LSS    L  L + N+ IS + A
Sbjct: 205 NIFSDALQGS-ILSSLNLSDNALGEKGVRAFGALLKSLSS----LEELYLMNDGISKEAA 259

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             V+E I + ++L  ++ + N  GDEGA  IA+ +K++  +         + SKG  A++
Sbjct: 260 QAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALS 319

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             L+  + +  LDL  N  G +   +LS+ L    ++  L L +  +   GA  + + L+
Sbjct: 320 EALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALK 379

Query: 497 YN-----------NTISI------------------LDLRANGLRDEGAKCLAQSFKVVN 527
            +           N I++                  L+L  N L+DEG   +A   + VN
Sbjct: 380 ESASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCIEEVN 439

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
             L  ID++ N IR  GA A+A  +   E  A   LN+  N +++ G   L +
Sbjct: 440 SKLQYIDMSTNYIRRAGARALAHVVVKKE--AFKLLNIDGNIISEEGIEELKE 490



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 3/245 (1%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           +E+ Q ++E          +       GDEG   +AE +  +   E    ++  + + G 
Sbjct: 256 KEAAQAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGG 315

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
            A    L+    ++ L+L  N  G E    L   L     +  L LS ++L DEGA AI 
Sbjct: 316 IALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIV 375

Query: 268 ELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
             LK + S + VLE+  N I     +++A  +     +  L+L+ N     G   +A  +
Sbjct: 376 NALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCI 435

Query: 327 EG-NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           E  N  L+ + +  N I   G RAL + +  +K    +L+I  N IS +G   + E  K 
Sbjct: 436 EEVNSKLQYIDMSTNYIRRAGARAL-AHVVVKKEAFKLLNIDGNIISEEGIEELKEIFKK 494

Query: 386 CKSLL 390
              LL
Sbjct: 495 SPELL 499


>gi|260828743|ref|XP_002609322.1| hypothetical protein BRAFLDRAFT_167681 [Branchiostoma floridae]
 gi|229294678|gb|EEN65332.1| hypothetical protein BRAFLDRAFT_167681 [Branchiostoma floridae]
          Length = 284

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 134/282 (47%), Gaps = 1/282 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD  +  LA  L +    E+++ + N I + G++ F  + Q   +LK LNLS N IGD 
Sbjct: 2   IGDVCMRSLASVLHHLSCLEDLNLSYNNIGSEGMEPFAAIEQPVASLKELNLSNNKIGDV 61

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
            ++ L  +L   + VE L LS  ++ +EG +  A + +  + L+VL L NN I      S
Sbjct: 62  CMRYLASVLHHLSCVEDLNLSYNNIGNEGLEPFAAIQQPVASLKVLNLCNNKIGDVCMRS 121

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA  L   S +  L+L+ N  G  G    A   +   SL+EL L  N IGD  +R+L S 
Sbjct: 122 LASVLHHLSCVEDLNLSYNNIGNEGLELFAAIQQPVASLKELSLSHNKIGDVCMRSLASL 181

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L      L  L++  N+I  +G    A   +   SL  +NL +N IGD     +A  L  
Sbjct: 182 LHHLPC-LVDLNLSYNNIGYEGLEPFAAIQQPVASLKVLNLCINKIGDVCMRSLAAVLHH 240

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
              +  +DL  NNI   G ++I   L     +  L L+ N I
Sbjct: 241 LSCLEDLDLSQNNIGDAGLASIVASLHHVPCLKYLTLSGNSI 282



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 117/253 (46%), Gaps = 1/253 (0%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E  +      + + +   +++S    GD  + +LA  L +    E+++ + N I   G++
Sbjct: 33  EGMEPFAAIEQPVASLKELNLSNNKIGDVCMRYLASVLHHLSCVEDLNLSYNNIGNEGLE 92

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
            F  + Q   +LK LNL  N IGD  ++ L  +L   + VE L LS  ++ +EG +  A 
Sbjct: 93  PFAAIQQPVASLKVLNLCNNKIGDVCMRSLASVLHHLSCVEDLNLSYNNIGNEGLELFAA 152

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           + +  + L+ L L++N I      SLA  L     +  L+L+ N  G  G    A   + 
Sbjct: 153 IQQPVASLKELSLSHNKIGDVCMRSLASLLHHLPCLVDLNLSYNNIGYEGLEPFAAIQQP 212

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
             SL+ L+L  N IGD  +R+L + L      L  LD+  N+I   G   +   + +   
Sbjct: 213 VASLKVLNLCINKIGDVCMRSLAAVL-HHLSCLEDLDLSQNNIGDAGLASIVASLHHVPC 271

Query: 389 LLWINLYMNDIGD 401
           L ++ L  N I +
Sbjct: 272 LKYLTLSGNSITE 284



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 2/283 (0%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D   +++A +L + S L  L L+ N I   G    A      ++++ L+L+ N  G +  
Sbjct: 4   DVCMRSLASVLHHLSCLEDLNLSYNNIGSEGMEPFAAIEQPVASLKELNLSNNKIGDVCM 63

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             LA  L     + +L+L  N+IG+EG+    + +      L VL++ NN I       +
Sbjct: 64  RYLASVLHHLSCVEDLNLSYNNIGNEGLEPF-AAIQQPVASLKVLNLCNNKIGDVCMRSL 122

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A  + +   +  +NL  N+IG+EG E  A   +   ++  + L  N I      ++A +L
Sbjct: 123 ASVLHHLSCVEDLNLSYNNIGNEGLELFAAIQQPVASLKELSLSHNKIGDVCMRSLASLL 182

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
                +  L+L+YN IG +G +  + + +   ++  L L   +IG      +A +L + +
Sbjct: 183 HHLPCLVDLNLSYNNIGYEGLEPFAAIQQPVASLKVLNLCINKIGDVCMRSLAAVLHHLS 242

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
            +  LDL  N + D G   +  S   V   L  + L+ N I +
Sbjct: 243 CLEDLDLSQNNIGDAGLASIVASLHHV-PCLKYLTLSGNSITE 284



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 1/284 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IGD  ++ L  +L   + +E L LS  ++  EG +  A + +  + L+ L L+NN I   
Sbjct: 2   IGDVCMRSLASVLHHLSCLEDLNLSYNNIGSEGMEPFAAIEQPVASLKELNLSNNKIGDV 61

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
               LA  L   S +  L+L+ N  G  G    A   +   SL+ L+L  N IGD  +R+
Sbjct: 62  CMRYLASVLHHLSCVEDLNLSYNNIGNEGLEPFAAIQQPVASLKVLNLCNNKIGDVCMRS 121

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           L S L      +  L++  N+I  +G    A   +   SL  ++L  N IGD     +A 
Sbjct: 122 LASVL-HHLSCVEDLNLSYNNIGNEGLELFAAIQQPVASLKELSLSHNKIGDVCMRSLAS 180

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L     +  ++L  NNI  +G    A + +  + +  L+L  N IG    ++L+ VL  
Sbjct: 181 LLHHLPCLVDLNLSYNNIGYEGLEPFAAIQQPVASLKVLNLCINKIGDVCMRSLAAVLHH 240

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
              +  L L    IG +G   +   L +   +  L L  N + +
Sbjct: 241 LSCLEDLDLSQNNIGDAGLASIVASLHHVPCLKYLTLSGNSITE 284



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 111/242 (45%), Gaps = 8/242 (3%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G +   +LA  L     L +L+L  N+IG EG+    + +      L  L++ NN I   
Sbjct: 3   GDVCMRSLASVLHHLSCLEDLNLSYNNIGSEGMEPF-AAIEQPVASLKELNLSNNKIGDV 61

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
              ++A  + +   +  +NL  N+IG+EG E  A   +   ++  ++L  N I      +
Sbjct: 62  CMRYLASVLHHLSCVEDLNLSYNNIGNEGLEPFAAIQQPVASLKVLNLCNNKIGDVCMRS 121

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A VL   S +  L+L+YN IG +G +  + + +   ++  L L   +IG      +A +
Sbjct: 122 LASVLHHLSCVEDLNLSYNNIGNEGLELFAAIQQPVASLKELSLSHNKIGDVCMRSLASL 181

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS---IDLAFNEIRDDGAFAIAQA 551
           L +   +  L+L  N +  EG     + F  + + + S   ++L  N+I D    ++A  
Sbjct: 182 LHHLPCLVDLNLSYNNIGYEG----LEPFAAIQQPVASLKVLNLCINKIGDVCMRSLAAV 237

Query: 552 LK 553
           L 
Sbjct: 238 LH 239



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 82/179 (45%)

Query: 134 AGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAE 193
           A   +L+    K+     ++L      L     +++S  N G+EGL   A       + +
Sbjct: 102 ASLKVLNLCNNKIGDVCMRSLASVLHHLSCVEDLNLSYNNIGNEGLELFAAIQQPVASLK 161

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E+S + N I    +++   +L     L  LNLS N IG EG++    I    A ++ L L
Sbjct: 162 ELSLSHNKIGDVCMRSLASLLHHLPCLVDLNLSYNNIGYEGLEPFAAIQQPVASLKVLNL 221

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
               + D   +++A +L + S L  L+L+ N I  +G  S+  +L     ++ L L+GN
Sbjct: 222 CINKIGDVCMRSLAAVLHHLSCLEDLDLSQNNIGDAGLASIVASLHHVPCLKYLTLSGN 280



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 10/192 (5%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           IGD     +A  L     +  ++L  NNI S+G    A + +  + +  L+L+ N IG  
Sbjct: 2   IGDVCMRSLASVLHHLSCLEDLNLSYNNIGSEGMEPFAAIEQPVASLKELNLSNNKIGDV 61

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
             + L+ VL     +  L L +  IG  G E  A + +   ++ +L+L  N + D   + 
Sbjct: 62  CMRYLASVLHHLSCVEDLNLSYNNIGNEGLEPFAAIQQPVASLKVLNLCNNKIGDVCMRS 121

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDG--AFAIAQALKANEDVAVTSLNLANNFLTKFGQS 576
           LA     ++  +  ++L++N I ++G   FA  Q   A    ++  L+L++N   K G  
Sbjct: 122 LASVLHHLS-CVEDLNLSYNNIGNEGLELFAAIQQPVA----SLKELSLSHN---KIGDV 173

Query: 577 ALTDAKDLVYEM 588
            +     L++ +
Sbjct: 174 CMRSLASLLHHL 185


>gi|157427717|ref|NP_001098765.1| nucleotide-binding oligomerization domain-containing protein 2 [Sus
           scrofa]
 gi|156623044|dbj|BAF76325.1| nucleotide-binding oligomerization domain 2 [Sus scrofa]
          Length = 1013

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 121/235 (51%), Gaps = 6/235 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  NS+GD G+  L+  L+  K     L + +N+IS +G   + E+   C+ L  + L
Sbjct: 768 LQLDHNSVGDIGVEQLLPCLNVCKA----LYLRDNNISDRGFCKLVEHALCCEQLQKLAL 823

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N + D  A  +A  L   R    + LG N+  + GA  +A+ L+ N+ +  L    N 
Sbjct: 824 FNNKLTDGCAHSMARLLACKRNFLALRLGNNHFTAVGAQVLAQGLRANTPLQFLGFWGNQ 883

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G  GA+AL+E L+ + ++  L L    IG+ GA+ +A ML  N  +  L L  N ++DE
Sbjct: 884 VGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQALALMLEKNMALEELCLEENHVQDE 943

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
           G   LA+  +  N +L  + L+ N +   GA A+ QAL+ N+ +    L   NNF
Sbjct: 944 GVCSLARGLE-RNSSLKVLKLSNNHVTSRGAEALLQALEQNDTILEVWLR-GNNF 996



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 141/279 (50%), Gaps = 4/279 (1%)

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            V    V  L+L+   +      A+A +L++      L+L++N +   G   L   L   +
Sbjct: 732  VRRLNVGHLKLTFCSVGPAECAALAFVLRHLQWPVALQLDHNSVGDIGVEQLLPCL---N 788

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
              ++L+L  N     G   L +     + L++L L  N + D    ++   L+ ++  LA
Sbjct: 789  VCKALYLRDNNISDRGFCKLVEHALCCEQLQKLALFNNKLTDGCAHSMARLLACKRNFLA 848

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +GNN  +A GA  +A+ ++    L ++  + N +GD+GA+ +A+AL+ N+++  + L
Sbjct: 849  -LRLGNNHFTAVGAQVLAQGLRANTPLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSL 907

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             GNNI S GA A+A +L+ N  +  L L  N +  +G  +L+  L+ + ++  LKL    
Sbjct: 908  VGNNIGSVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNH 967

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            + + GAE +   L  N+TI  + LR N    E  + L+Q
Sbjct: 968  VTSRGAEALLQALEQNDTILEVWLRGNNFSPEETEQLSQ 1006



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 80/151 (52%)

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N  TA G +     L++N  L+ L   GN +GD+G + L + L DN  ++ L L   ++ 
Sbjct: 854  NHFTAVGAQVLAQGLRANTPLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSLVGNNIG 913

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
              GA+A+A +L+ N  L  L L  N +   G  SLA  L  NS+++ L L+ N+  + GA
Sbjct: 914  SVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGA 973

Query: 320  NALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             AL + LE N ++ E+ L GN+   E    L
Sbjct: 974  EALLQALEQNDTILEVWLRGNNFSPEETEQL 1004



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 87/174 (50%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++       R F ++ +   +F   G   LA+ L  N   + + F 
Sbjct: 821 LALFNNKLTDGCAHSMARLLACKRNFLALRLGNNHFTAVGAQVLAQGLRANTPLQFLGFW 880

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A    L+ N +LK L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 881 GNQVGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQALALMLEKNMALEELCLEENHV 940

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +DEG  ++A  L+ NS L+VL+L+NN +   G  +L +AL +N TI  + L GN
Sbjct: 941 QDEGVCSLARGLERNSSLKVLKLSNNHVTSRGAEALLQALEQNDTILEVWLRGN 994



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 85/197 (43%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G   L E     +  ++++   N +T     +   +L        L L  N    
Sbjct: 799 NISDRGFCKLVEHALCCEQLQKLALFNNKLTDGCAHSMARLLACKRNFLALRLGNNHFTA 858

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L   L  N  ++ L      + D+GA+A+AE L++N  L+ L L  N I   G  
Sbjct: 859 VGAQVLAQGLRANTPLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQ 918

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA  L +N  +  L L  N+    G  +LA+GLE N SL+ L L  N +   G  AL+ 
Sbjct: 919 ALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGAEALLQ 978

Query: 353 GLSSRKGKLAVLDIGNN 369
            L      L V   GNN
Sbjct: 979 ALEQNDTILEVWLRGNN 995


>gi|301098077|ref|XP_002898132.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262105493|gb|EEY63545.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 436

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 189/417 (45%), Gaps = 53/417 (12%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           MS R+ GD     LA S+  N   EE+  + + +   G++AF   L +N  LK L+L   
Sbjct: 28  MSTRSIGDSDFVKLASSISSNTLLEELYLSGHQLGPLGLQAFADCLATNSTLKHLSLGSE 87

Query: 229 PIGDEGVKCLCDILVDN--AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            +GDE V+ LC  L  N  +G++   L    L   GA A+AELLK N  L  + L++N I
Sbjct: 88  KLGDEAVQVLCAGLARNTQSGLQNWDLEFKSLGANGAAAVAELLKTNKSLTTVSLSHNQI 147

Query: 287 DYSGFTSLAEALLEN--STIRSLHLN--GNYGGALGA----------------------- 319
              G   LA+ L EN  S ++ L++   G  G  LG                        
Sbjct: 148 GDEGVEKLAKGLSENAQSGVKELNVTEVGISGSGLGHLATLVEKETCSLSTIQLSFNTLE 207

Query: 320 -------NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                  +ALAK    NKS+ +L L    + D+ + AL + L  +   L  +D+ +N ++
Sbjct: 208 SATSTFFDALAK----NKSVTKLQLKECKLSDQHVAALSAAL-KQNTTLVEIDLSDNELT 262

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT-IDLGGNNIHSKG 431
                 +AE +   K+L  + +  N   DEGA  +AD L  N T  T +D+G N + S G
Sbjct: 263 QTSCASLAEGLCENKTLKILRINNNKCQDEGAALLADVLTTNNTTLTYLDMGNNGLTSVG 322

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
              +  +LK  S +T L L  N +G +G   L   L  +  I T  +G  Q+  + +  +
Sbjct: 323 ---MTPLLKAQS-MTQLHLLNNKLG-EGLSELLPALLANAVIETFGIGANQLHEALSVTM 377

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF--NEIRDDGAF 546
            D L  + ++  L++  N L   G   L +    + EA   +D+A   N   +D +F
Sbjct: 378 LDALHSHPSLKTLEMGGNTLGKAGHDALDK----LKEANRGLDVAVDKNAQNEDSSF 430



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 144/314 (45%), Gaps = 37/314 (11%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGV 213
           E  K  ++ ++V +S    GDEG+  LA+ L  N  +  +E++    GI+ +G+     +
Sbjct: 129 ELLKTNKSLTTVSLSHNQIGDEGVEKLAKGLSENAQSGVKELNVTEVGISGSGLGHLATL 188

Query: 214 LQ-SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           ++    +L T+ LS N + +       D L  N  V +LQL    L D+   A++  LK 
Sbjct: 189 VEKETCSLSTIQLSFNTL-ESATSTFFDALAKNKSVTKLQLKECKLSDQHVAALSAALKQ 247

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L  ++L++N +  +   SLAE L EN T++ L +N                      
Sbjct: 248 NTTLVEIDLSDNELTQTSCASLAEGLCENKTLKILRIN---------------------- 285

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
                  N   DEG   L   L++    L  LD+GNN +++ G   +   +K  +S+  +
Sbjct: 286 ------NNKCQDEGAALLADVLTTNNTTLTYLDMGNNGLTSVG---MTPLLK-AQSMTQL 335

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  N +G EG  ++  AL  N  I T  +G N +H   +  +   L  +  + +L++  
Sbjct: 336 HLLNNKLG-EGLSELLPALLANAVIETFGIGANQLHEALSVTMLDALHSHPSLKTLEMGG 394

Query: 453 NPIGADGAKALSEV 466
           N +G  G  AL ++
Sbjct: 395 NTLGKAGHDALDKL 408


>gi|397498167|ref|XP_003819863.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Pan paniscus]
          Length = 1040

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 5/244 (2%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 775  GPAECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 830

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 831  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGAQV 890

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A+ L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 891  LAQGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 950

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            L  N  +  L L  N L+DEG   LA+  K  N +L  + L+ N I   GA A+ QAL+ 
Sbjct: 951  LAKNVMLEELCLEENHLQDEGVCSLAEGLK-KNSSLKILKLSNNCITYLGAEALLQALER 1009

Query: 555  NEDV 558
            N+ +
Sbjct: 1010 NDTI 1013



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 764  VGHLKLTFCSVGPAECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 820

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 821  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 879

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +A+ ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 880  NNHITAAGAQVLAQGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 939

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    I   G
Sbjct: 940  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 999

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            AE +   L  N+TI  + LR N
Sbjct: 1000 AEALLQALERNDTILEVWLRGN 1021



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 863  MAKLLACRQNFLALRLGNNHITAAGAQVLAQGLRGNTSLQFLGFWGNRVGDEGAQALAEA 922

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L +N
Sbjct: 923  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 982

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +  L
Sbjct: 983  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 1031



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL        L 
Sbjct: 818  KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALR 877

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G   LA+ L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 878  LGNNHITAAGAQVLAQGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 937

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +IG  G +AL   L ++   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 938  NIGSVGAQALALML-AKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCIT 996

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNI 427
              GAE +  AL++N TI  + L GN  
Sbjct: 997  YLGAEALLQALERNDTILEVWLRGNTF 1023



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 88/174 (50%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F ++ +   +    G   LA+ L  N + + + F 
Sbjct: 848  LALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGAQVLAQGLRGNTSLQFLGFW 907

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A    L  + +L+ L+L GN IG  G + L  +L  N  +E L L    L
Sbjct: 908  GNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHL 967

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            +DEG  ++AE LK NS L++L+L+NN I Y G  +L +AL  N TI  + L GN
Sbjct: 968  QDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGN 1021



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 86/197 (43%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 826  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 885

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L   L  N  ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 886  AGAQVLAQGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 945

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N I   G  AL+ 
Sbjct: 946  ALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQ 1005

Query: 353  GLSSRKGKLAVLDIGNN 369
             L      L V   GN 
Sbjct: 1006 ALERNDTILEVWLRGNT 1022


>gi|410982498|ref|XP_003997593.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Felis
            catus]
          Length = 1328

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 150/339 (44%), Gaps = 10/339 (2%)

Query: 190  QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGV 248
            Q     S   N +  A  K     L +N  L+ L L  N +G  GV+ LC+ L   +  +
Sbjct: 952  QALPAPSPETNVLPDAYSKQLAAALSTNPHLRELLLDHNALGSRGVRLLCEGLRHPSCKL 1011

Query: 249  ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSL 307
            + L+L    +     + +A  L  N  LR ++L+ N +   G   L + L      ++++
Sbjct: 1012 QNLRLKRCCVAPSACRDLAAALMANQNLRRMDLSGNGLGLPGVKMLCQGLRHPRCRLQAI 1071

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
             L      A     +A  L  N+ L EL L GNS+ D G+R L  GL      L +L + 
Sbjct: 1072 QLRKCELEAGACQEIASVLSTNQHLVELDLAGNSLEDLGLRLLCQGLRHPVCGLRILWLK 1131

Query: 368  NNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGN 425
               ++A     +   +  NC SL  ++L +ND+GD G   + + L+  +  + T+ LG  
Sbjct: 1132 ICDLTAAACEDLTSILSVNC-SLRELDLSLNDLGDPGVLLLCEGLRHPQCRLQTLRLGIC 1190

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW---CQ 482
             + S     +  VL+ N  +  LDL++N +G  G   L E L  H      KL W   C 
Sbjct: 1191 RLGSAACEGLGAVLQVNPHLRELDLSFNDLGDRGMWPLCEGLG-HPTCRLQKL-WLDSCG 1248

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            + A   E +A  L  + T++ L L  N L D G + L +
Sbjct: 1249 LTAKACEHLASALGVSQTLTELYLTNNALGDTGVRLLCK 1287



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 138/320 (43%), Gaps = 5/320 (1%)

Query: 258  LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGA 316
            L D  +K +A  L  N  LR L L++N +   G   L E L   S  +++L L       
Sbjct: 964  LPDAYSKQLAAALSTNPHLRELLLDHNALGSRGVRLLCEGLRHPSCKLQNLRLKRCCVAP 1023

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                 LA  L  N++LR + L GN +G  G++ L  GL   + +L  + +    + A   
Sbjct: 1024 SACRDLAAALMANQNLRRMDLSGNGLGLPGVKMLCQGLRHPRCRLQAIQLRKCELEAGAC 1083

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
              +A  +   + L+ ++L  N + D G   +   L+     +  + L   ++ +     +
Sbjct: 1084 QEIASVLSTNQHLVELDLAGNSLEDLGLRLLCQGLRHPVCGLRILWLKICDLTAAACEDL 1143

Query: 436  ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADM 494
              +L  N  +  LDL+ N +G  G   L E L+     + TL+LG C++G++  E +  +
Sbjct: 1144 TSILSVNCSLRELDLSLNDLGDPGVLLLCEGLRHPQCRLQTLRLGICRLGSAACEGLGAV 1203

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            L+ N  +  LDL  N L D G   L +        L  + L    +       +A AL  
Sbjct: 1204 LQVNPHLRELDLSFNDLGDRGMWPLCEGLGHPTCRLQKLWLDSCGLTAKACEHLASALGV 1263

Query: 555  NEDVAVTSLNLANNFLTKFG 574
            ++   +T L L NN L   G
Sbjct: 1264 SQ--TLTELYLTNNALGDTG 1281



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 125/302 (41%), Gaps = 4/302 (1%)

Query: 174  FGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G  G+  L E L +     + +      +  +  +     L +N  L+ ++LSGN +G 
Sbjct: 992  LGSRGVRLLCEGLRHPSCKLQNLRLKRCCVAPSACRDLAAALMANQNLRRMDLSGNGLGL 1051

Query: 233  EGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
             GVK LC  L      ++ +QL   +L     + IA +L  N  L  L+L  N ++  G 
Sbjct: 1052 PGVKMLCQGLRHPRCRLQAIQLRKCELEAGACQEIASVLSTNQHLVELDLAGNSLEDLGL 1111

Query: 292  TSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              L + L      +R L L      A     L   L  N SLREL L  N +GD G+  L
Sbjct: 1112 RLLCQGLRHPVCGLRILWLKICDLTAAACEDLTSILSVNCSLRELDLSLNDLGDPGVLLL 1171

Query: 351  MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              GL   + +L  L +G   + +     +   ++    L  ++L  ND+GD G   + + 
Sbjct: 1172 CEGLRHPQCRLQTLRLGICRLGSAACEGLGAVLQVNPHLRELDLSFNDLGDRGMWPLCEG 1231

Query: 411  LKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L      +  + L    + +K    +A  L  +  +T L L  N +G  G + L + L  
Sbjct: 1232 LGHPTCRLQKLWLDSCGLTAKACEHLASALGVSQTLTELYLTNNALGDTGVRLLCKGLSH 1291

Query: 470  HG 471
             G
Sbjct: 1292 PG 1293



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 3/250 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+SG   G  G+  L + L + +   + +      + A   +    VL +N  L  L+L
Sbjct: 1042 MDLSGNGLGLPGVKMLCQGLRHPRCRLQAIQLRKCELEAGACQEIASVLSTNQHLVELDL 1101

Query: 226  SGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            +GN + D G++ LC  L     G+  L L   DL     + +  +L  N  LR L+L+ N
Sbjct: 1102 AGNSLEDLGLRLLCQGLRHPVCGLRILWLKICDLTAAACEDLTSILSVNCSLRELDLSLN 1161

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             +   G   L E L      +++L L     G+     L   L+ N  LREL L  N +G
Sbjct: 1162 DLGDPGVLLLCEGLRHPQCRLQTLRLGICRLGSAACEGLGAVLQVNPHLRELDLSFNDLG 1221

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D G+  L  GL     +L  L + +  ++AK   H+A  +   ++L  + L  N +GD G
Sbjct: 1222 DRGMWPLCEGLGHPTCRLQKLWLDSCGLTAKACEHLASALGVSQTLTELYLTNNALGDTG 1281

Query: 404  AEKIADALKQ 413
               +   L  
Sbjct: 1282 VRLLCKGLSH 1291



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 3/201 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D++G +  D GL  L + L +      + +     +TAA  +    +L  N +L+ L+L
Sbjct: 1099 LDLAGNSLEDLGLRLLCQGLRHPVCGLRILWLKICDLTAAACEDLTSILSVNCSLRELDL 1158

Query: 226  SGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N +GD GV  LC+ L      ++ L+L    L     + +  +L+ N  LR L+L+ N
Sbjct: 1159 SLNDLGDPGVLLLCEGLRHPQCRLQTLRLGICRLGSAACEGLGAVLQVNPHLRELDLSFN 1218

Query: 285  MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             +   G   L E L   +  ++ L L+     A     LA  L  +++L EL+L  N++G
Sbjct: 1219 DLGDRGMWPLCEGLGHPTCRLQKLWLDSCGLTAKACEHLASALGVSQTLTELYLTNNALG 1278

Query: 344  DEGIRALMSGLSSRKGKLAVL 364
            D G+R L  GLS    KL VL
Sbjct: 1279 DTGVRLLCKGLSHPGCKLRVL 1299


>gi|410916745|ref|XP_003971847.1| PREDICTED: T-complex-associated testis-expressed protein 1-like
           [Takifugu rubripes]
          Length = 495

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 100/175 (57%), Gaps = 2/175 (1%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           SL +AL    T+++LH+  ++        L K L  + SLREL L  N IGD+G +A+  
Sbjct: 287 SLGKALKSCLTLKTLHVCLSHMDDNKCCRLVKHLSDHPSLRELDLSYNLIGDKGAKAISQ 346

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L+  K +L  L + NN I   GA  +A+ + +  +LL +NL +N + DEG E IA AL 
Sbjct: 347 LLN--KSRLETLKMCNNCIGDPGAKAIAQALSHNGTLLSLNLRLNCLQDEGGEAIAGALL 404

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           +N ++  + LG N +    A+ +A+ L+ N  + S++L++N +G DG KAL   L
Sbjct: 405 RNDSLCHLHLGANELTGHTAAMLAKALRQNKTLRSINLSFNKLGVDGGKALQAAL 459



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 112/241 (46%), Gaps = 30/241 (12%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           IT    ++    L+S + LKTL++  + + D     L   L D+  +  L LS   + D+
Sbjct: 280 ITDRDCESLGKALKSCLTLKTLHVCLSHMDDNKCCRLVKHLSDHPSLRELDLSYNLIGDK 339

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GAKAI++LL N S L  L++ NN I   G  ++A+AL  N T+ SL+L  N     G  A
Sbjct: 340 GAKAISQLL-NKSRLETLKMCNNCIGDPGAKAIAQALSHNGTLLSLNLRLNCLQDEGGEA 398

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           +A  L  N SL  LHL                             G N ++   A  +A+
Sbjct: 399 IAGALLRNDSLCHLHL-----------------------------GANELTGHTAAMLAK 429

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            ++  K+L  INL  N +G +G + +  AL  N  +T  D+    I  + AS+I +V+  
Sbjct: 430 ALRQNKTLRSINLSFNKLGVDGGKALQAALSCNTILTECDVRLTEIEDQSASSIKQVVWS 489

Query: 442 N 442
           N
Sbjct: 490 N 490



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 9/183 (4%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  + +L+ L+LS N IGD+G K +  +L + + +E L++ +  + D GAKAIA+ L +N
Sbjct: 320 LSDHPSLRELDLSYNLIGDKGAKAISQLL-NKSRLETLKMCNNCIGDPGAKAIAQALSHN 378

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L  N +   G  ++A ALL N ++  LHL  N      A  LAK L  NK+LR
Sbjct: 379 GTLLSLNLRLNCLQDEGGEAIAGALLRNDSLCHLHLGANELTGHTAAMLAKALRQNKTLR 438

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            ++L  N +G +G +AL + LS     L   D+    I  + A  +       K ++W N
Sbjct: 439 SINLSFNKLGVDGGKALQAALSCNT-ILTECDVRLTEIEDQSASSI-------KQVVWSN 490

Query: 394 LYM 396
            ++
Sbjct: 491 QHL 493



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 7/216 (3%)

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I+ +    + + +K+C +L  +++ ++ + D    ++   L  + ++  +DL  N I  K
Sbjct: 280 ITDRDCESLGKALKSCLTLKTLHVCLSHMDDNKCCRLVKHLSDHPSLRELDLSYNLIGDK 339

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AI+++L + S + +L +  N IG  GAKA+++ L  +G + +L L    +   G E 
Sbjct: 340 GAKAISQLL-NKSRLETLKMCNNCIGDPGAKAIAQALSHNGTLLSLNLRLNCLQDEGGEA 398

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
           +A  L  N+++  L L AN L    A  LA++ +  N+ L SI+L+FN++  DG  A+  
Sbjct: 399 IAGALLRNDSLCHLHLGANELTGHTAAMLAKALR-QNKTLRSINLSFNKLGVDGGKALQA 457

Query: 551 ALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 586
           AL  N     T L   +  LT+    + +  K +V+
Sbjct: 458 ALSCN-----TILTECDVRLTEIEDQSASSIKQVVW 488



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 78/185 (42%), Gaps = 31/185 (16%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +   +D+S    GD+G   +++ L  ++  E +    N I   G KA    L  N  L +
Sbjct: 325 SLRELDLSYNLIGDKGAKAISQLLNKSRL-ETLKMCNNCIGDPGAKAIAQALSHNGTLLS 383

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA-ELLKNNSILRVLEL 281
           LNL  N                             L+DEG +AIA  LL+N+S+   L L
Sbjct: 384 LNLRLNC----------------------------LQDEGGEAIAGALLRNDSLCH-LHL 414

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N +       LA+AL +N T+RS++L+ N  G  G  AL   L  N  L E  +    
Sbjct: 415 GANELTGHTAAMLAKALRQNKTLRSINLSFNKLGVDGGKALQAALSCNTILTECDVRLTE 474

Query: 342 IGDEG 346
           I D+ 
Sbjct: 475 IEDQS 479



 Score = 39.3 bits (90), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 5/148 (3%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             ++ M     GD G   +A++L +N T   ++   N +   G +A  G L  N +L  L
Sbjct: 353 LETLKMCNNCIGDPGAKAIAQALSHNGTLLSLNLRLNCLQDEGGEAIAGALLRNDSLCHL 412

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L  N +       L   L  N  +  + LS   L  +G KA+   L  N+IL   ++  
Sbjct: 413 HLGANELTGHTAAMLAKALRQNKTLRSINLSFNKLGVDGGKALQAALSCNTILTECDVRL 472

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNG 311
             I+    +S+ + +  N      HL G
Sbjct: 473 TEIEDQSASSIKQVVWSNQ-----HLEG 495


>gi|399497872|emb|CCG20264.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497890|emb|CCG20273.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E +  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEASSAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K  +   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLFQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  +  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|340507176|gb|EGR33186.1| hypothetical protein IMG5_060000 [Ichthyophthirius multifiliis]
          Length = 404

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 158/320 (49%), Gaps = 17/320 (5%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG-YNQTAEEVSFAANGITA 204
           L ++S++TL+      R    ++ + R   D+ +  L+E L  +      +  + N IT 
Sbjct: 40  LQQDSEETLDIV---FRGNDKLNFTSR-LKDKDIIILSEVLKKHASIIHHIDLSFNLITD 95

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +A   +L     +++LNL GN I + G   L D L +N  ++ L L S  ++  G+ 
Sbjct: 96  IGAEALSSLLALCNNIESLNLQGNNIENTGGLHLADKLKENFSLKYLNLDSNKIKTNGSM 155

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALG---AN 320
            I E+L NN  L  L L +N I + G   +   L  +N+T+  L+++     ++G   A 
Sbjct: 156 NIIEILFNNKNLIELNLADNDITHDGMIGITSVLNFQNNTLAVLNVDKPTYTSIGQETAI 215

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
             AK L+ N+SL +L L  ++   E I  +   L     KL VLD+  N IS KG   +A
Sbjct: 216 HFAKMLQSNRSLEKLSLQKHNFTCEAIYIMTEHLL-ENNKLRVLDLTANKISFKGCEAIA 274

Query: 381 EYI--KNC--KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
           +Y+  + C  +SL+   L  N  G  GA+ IA AL + +++  +D+  N+I   G   IA
Sbjct: 275 KYLLSEYCVLESLI---LKSNRTGHYGAKAIAQALSKTKSLVHLDMTYNDIDDNGLKMIA 331

Query: 437 RVLKDNSVITSLDLAYNPIG 456
             L+ N  + SL L +N  G
Sbjct: 332 EALESNKSLVSLKLYFNHFG 351



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 162/321 (50%), Gaps = 9/321 (2%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV-ERLQ 252
           E+ + +  +     +  D V + N     LN +   + D+ +  L ++L  +A +   + 
Sbjct: 32  ELEYPSRTLQQDSEETLDIVFRGN---DKLNFTSR-LKDKDIIILSEVLKKHASIIHHID 87

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           LS   + D GA+A++ LL   + +  L L  N I+ +G   LA+ L EN +++ L+L+ N
Sbjct: 88  LSFNLITDIGAEALSSLLALCNNIESLNLQGNNIENTGGLHLADKLKENFSLKYLNLDSN 147

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN---N 369
                G+  + + L  NK+L EL+L  N I  +G+  + S L+ +   LAVL++      
Sbjct: 148 KIKTNGSMNIIEILFNNKNLIELNLADNDITHDGMIGITSVLNFQNNTLAVLNVDKPTYT 207

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
           SI  + A H A+ +++ +SL  ++L  ++   E    + + L +N  +  +DL  N I  
Sbjct: 208 SIGQETAIHFAKMLQSNRSLEKLSLQKHNFTCEAIYIMTEHLLENNKLRVLDLTANKISF 267

Query: 430 KGASAIAR-VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
           KG  AIA+ +L +  V+ SL L  N  G  GAKA+++ L    ++  L + +  I  +G 
Sbjct: 268 KGCEAIAKYLLSEYCVLESLILKSNRTGHYGAKAIAQALSKTKSLVHLDMTYNDIDDNGL 327

Query: 489 EFVADMLRYNNTISILDLRAN 509
           + +A+ L  N ++  L L  N
Sbjct: 328 KMIAEALESNKSLVSLKLYFN 348



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 6/244 (2%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D+ I  L   L      +  +D+  N I+  GA  ++  +  C ++  +NL  N+I +
Sbjct: 64  LKDKDIIILSEVLKKHASIIHHIDLSFNLITDIGAEALSSLLALCNNIESLNLQGNNIEN 123

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
            G   +AD LK+N ++  ++L  N I + G+  I  +L +N  +  L+LA N I  DG  
Sbjct: 124 TGGLHLADKLKENFSLKYLNLDSNKIKTNGSMNIIEILFNNKNLIELNLADNDITHDGMI 183

Query: 462 ALSEVLKFHGN----INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
            ++ VL F  N    +N  K  +  IG   A   A ML+ N ++  L L+ +    E   
Sbjct: 184 GITSVLNFQNNTLAVLNVDKPTYTSIGQETAIHFAKMLQSNRSLEKLSLQKHNFTCEAIY 243

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSA 577
            + +   + N  L  +DL  N+I   G  AIA+ L + E   + SL L +N    +G  A
Sbjct: 244 IMTEHL-LENNKLRVLDLTANKISFKGCEAIAKYLLS-EYCVLESLILKSNRTGHYGAKA 301

Query: 578 LTDA 581
           +  A
Sbjct: 302 IAQA 305



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 1/152 (0%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G E     A+ L  N++ E++S   +  T   I      L  N  L+ L+L+ N I  +
Sbjct: 209 IGQETAIHFAKMLQSNRSLEKLSLQKHNFTCEAIYIMTEHLLENNKLRVLDLTANKISFK 268

Query: 234 GVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           G + +   L+    V E L L S      GAKAIA+ L     L  L++  N ID +G  
Sbjct: 269 GCEAIAKYLLSEYCVLESLILKSNRTGHYGAKAIAQALSKTKSLVHLDMTYNDIDDNGLK 328

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            +AEAL  N ++ SL L  N+ G +      K
Sbjct: 329 MIAEALESNKSLVSLKLYFNHFGQMALQEFHK 360



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 89/223 (39%), Gaps = 33/223 (14%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ-SN 217
           KE  +   +++        G   + E L  N+   E++ A N IT  G+     VL   N
Sbjct: 134 KENFSLKYLNLDSNKIKTNGSMNIIEILFNNKNLIELNLADNDITHDGMIGITSVLNFQN 193

Query: 218 IALKTLNL---SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
             L  LN+   +   IG E       +L  N  +E+L L   +   E    + E L  N+
Sbjct: 194 NTLAVLNVDKPTYTSIGQETAIHFAKMLQSNRSLEKLSLQKHNFTCEAIYIMTEHLLENN 253

Query: 275 ILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGL------- 326
            LRVL+L  N I + G  ++A+ LL E   + SL L  N  G  GA A+A+ L       
Sbjct: 254 KLRVLDLTANKISFKGCEAIAKYLLSEYCVLESLILKSNRTGHYGAKAIAQALSKTKSLV 313

Query: 327 ---------------------EGNKSLRELHLHGNSIGDEGIR 348
                                E NKSL  L L+ N  G   ++
Sbjct: 314 HLDMTYNDIDDNGLKMIAEALESNKSLVSLKLYFNHFGQMALQ 356


>gi|399497836|emb|CCG20246.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHIHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS                             N ++L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALS-----------------------------NHENLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  +A+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAMANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHIHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKLLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +  +
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGH--I 439

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 440 HLIEVDMSSNALRRAGARVL 459



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-NHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA A+A ALK +   ++  L +A N +T
Sbjct: 369 EGAIAMANALK-DSAPSLAVLEMAGNDIT 396


>gi|229596699|ref|XP_001007500.2| Protein kinase domain containing protein [Tetrahymena thermophila]
 gi|225565160|gb|EAR87255.2| Protein kinase domain containing protein [Tetrahymena thermophila
           SB210]
          Length = 1132

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 159/283 (56%), Gaps = 16/283 (5%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           L + +I+   L   +G    A+ +AK    N S   L L  NSIG +G +A+ S ++   
Sbjct: 660 LYHPSIKGFFLQIIHGAKAVASEIAKC--TNLSTLTLSLQVNSIGSDGAKAVASEIAKCT 717

Query: 359 GKLAV-LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND--IGDEGAEKIADALKQ-- 413
               + L++G+N+I + GA  VA  I  C +L  ++L ++   IG +GA+  A  + +  
Sbjct: 718 NLSTLSLNLGSNNIGSDGAKAVASEIAKCTNLSTLSLNLSSNNIGSDGAKAFASKIAKYT 777

Query: 414 NRTITTIDLGGNNIHSKGASAIA-RVLKDNSVIT-SLDLAYNPIGADGAKALSEVLKFHG 471
           N +  T+DLG NNI S GA A+A ++ K  ++ T SLD   N IG+DGAK ++  +    
Sbjct: 778 NLSTLTLDLGNNNIGSDGAKAVASKIAKYTNLSTLSLDFYSNNIGSDGAKEVASEIAKCT 837

Query: 472 NINTLKLGWCQ---IGASGAEFVADML-RYNNTISI-LDLRANGLRDEGAKCLAQSF-KV 525
           N++TL L W Q   IG++GA+ VA  + +Y N  ++ L+L+ N +  +GAK +A    K 
Sbjct: 838 NLSTLSL-WLQLNSIGSNGAKAVASKIAKYTNLSTLSLNLQFNNIGSDGAKAVASEIAKC 896

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N +  S++L ++ I  DGA A+A  +    +++  SLNL+NN
Sbjct: 897 TNLSTLSLNLRWSSIGSDGAKAVASEIAKCTNLSTLSLNLSNN 939



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 195/374 (52%), Gaps = 22/374 (5%)

Query: 216  SNIALKTLNLSGNPIGDEGVKCLCDIL--VDNAGVERLQLSSVDLRDEGAKAIA-ELLK- 271
            +N++  TL+L  N IG +G K +   +    N     L L S ++  +GAKA+A E+ K 
Sbjct: 687  TNLSTLTLSLQVNSIGSDGAKAVASEIAKCTNLSTLSLNLGSNNIGSDGAKAVASEIAKC 746

Query: 272  NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGALGANALAKGLEGN 329
             N     L L++N I   G  + A  + + + + +L L+   N  G+ GA A+A  +   
Sbjct: 747  TNLSTLSLNLSSNNIGSDGAKAFASKIAKYTNLSTLTLDLGNNNIGSDGAKAVASKIAKY 806

Query: 330  KSLRELHL--HGNSIGDEGIRALMSGLSSRKGKLAVLDI--GNNSISAKGAFHVAEYIKN 385
             +L  L L  + N+IG +G + + S ++ +   L+ L +    NSI + GA  VA  I  
Sbjct: 807  TNLSTLSLDFYSNNIGSDGAKEVASEIA-KCTNLSTLSLWLQLNSIGSNGAKAVASKIAK 865

Query: 386  CKSL--LWINLYMNDIGDEGAEKIADALKQNRTITTIDLG--GNNIHSKGASAIA-RVLK 440
              +L  L +NL  N+IG +GA+ +A  + +   ++T+ L    ++I S GA A+A  + K
Sbjct: 866  YTNLSTLSLNLQFNNIGSDGAKAVASEIAKCTNLSTLSLNLRWSSIGSDGAKAVASEIAK 925

Query: 441  DNSVIT-SLDLAYNPIGADGAKALSEVLKFHGNINTLK--LGWCQIGASGAEFVADMLRY 497
              ++ T SL+L+ N IG+DGAK ++  +    N++TL   LGW  IG+ GA+ VA  +  
Sbjct: 926  CTNLSTLSLNLSNNNIGSDGAKEVASEIAKCTNLSTLSLNLGWNSIGSDGAKVVASEITK 985

Query: 498  NNTISI--LDLRANGLRDEGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
               +S   LD  +N +  +GAK +A    K  N +  S+ L  N+I  DGA A+A  +  
Sbjct: 986  CTDLSTLSLDFYSNNIGSDGAKEVASEIAKCTNLSTLSLWLQSNKIGSDGAKAVASEIAK 1045

Query: 555  NEDVAVTSLNLANN 568
              +++  SL L  N
Sbjct: 1046 CTNLSTLSLWLGGN 1059



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 199/393 (50%), Gaps = 22/393 (5%)

Query: 195  VSFAANGITAAGIKAFDGVLQ--SNIALKTLNLSGNPIGDEGVKCLCDIL--VDNAGVER 250
            +S   N I + G KA    +   +N++  +LNL  N IG +G K +   +    N     
Sbjct: 694  LSLQVNSIGSDGAKAVASEIAKCTNLSTLSLNLGSNNIGSDGAKAVASEIAKCTNLSTLS 753

Query: 251  LQLSSVDLRDEGAKAIAELLKNNSILRVLELN--NNMIDYSGFTSLAEALLENSTIRSLH 308
            L LSS ++  +GAKA A  +   + L  L L+  NN I   G  ++A  + + + + +L 
Sbjct: 754  LNLSSNNIGSDGAKAFASKIAKYTNLSTLTLDLGNNNIGSDGAKAVASKIAKYTNLSTLS 813

Query: 309  LN--GNYGGALGANALAKGLE--GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV- 363
            L+   N  G+ GA  +A  +    N S   L L  NSIG  G +A+ S ++       + 
Sbjct: 814  LDFYSNNIGSDGAKEVASEIAKCTNLSTLSLWLQLNSIGSNGAKAVASKIAKYTNLSTLS 873

Query: 364  LDIGNNSISAKGAFHVAEYIKNCKSL--LWINLYMNDIGDEGAEKIADALKQNRTITTI- 420
            L++  N+I + GA  VA  I  C +L  L +NL  + IG +GA+ +A  + +   ++T+ 
Sbjct: 874  LNLQFNNIGSDGAKAVASEIAKCTNLSTLSLNLRWSSIGSDGAKAVASEIAKCTNLSTLS 933

Query: 421  -DLGGNNIHSKGASAIA-RVLKDNSVIT-SLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
             +L  NNI S GA  +A  + K  ++ T SL+L +N IG+DGAK ++  +    +++TL 
Sbjct: 934  LNLSNNNIGSDGAKEVASEIAKCTNLSTLSLNLGWNSIGSDGAKVVASEITKCTDLSTLS 993

Query: 478  LGWC--QIGASGAEFVADMLRYNNTISILDL--RANGLRDEGAKCLAQSF-KVVNEALTS 532
            L +    IG+ GA+ VA  +     +S L L  ++N +  +GAK +A    K  N +  S
Sbjct: 994  LDFYSNNIGSDGAKEVASEIAKCTNLSTLSLWLQSNKIGSDGAKAVASEIAKCTNLSTLS 1053

Query: 533  IDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
            + L  N+I  D A A+A  +    +++  SL L
Sbjct: 1054 LWLGGNDIGSDAAKAVASEIAKCTNLSTLSLWL 1086


>gi|399497832|emb|CCG20244.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497868|emb|CCG20262.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497878|emb|CCG20267.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497894|emb|CCG20275.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497898|emb|CCG20277.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399498120|emb|CCG20388.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E +  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEASSAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K  +   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLFQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  +  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|399497912|emb|CCG20284.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E +  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEASSAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K  +   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLFQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  +  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|149042678|gb|EDL96315.1| rCG49763 [Rattus norvegicus]
          Length = 185

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 107/185 (57%), Gaps = 1/185 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ALA+ L+ N+ L  L L  N+I + G+  LM  L + +  L+ L++  NSIS +GA  +A
Sbjct: 2   ALAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQ-TLSSLNLRENSISPEGAQALA 60

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +    +L  ++L  N + D+GA+ IA A+ +N ++T + L  N I +  A A+ + L+
Sbjct: 61  QALCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQ 120

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+LDL  N IG +GA +++  LK +  +  L L    IG+ GA+ + + L  N T
Sbjct: 121 LNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRT 180

Query: 501 ISILD 505
           + IL+
Sbjct: 181 LEILE 185



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 98/185 (52%), Gaps = 1/185 (0%)

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+AE LK N  L  L+L +N I  +G   L  AL  N T+ SL+L  N     GA ALA+
Sbjct: 2   ALAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQ 61

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N +L+ L L  N + D+G +A+ + +      L  L +  N I A  A  + + ++
Sbjct: 62  ALCRNTTLKHLDLTANLLHDQGAQAIATAV-GENCSLTHLHLQWNFIQAGAARALGQALQ 120

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV 444
             ++L  ++L  N IGDEGA  +A ALK N T+T + L   +I S+GA A+   L  N  
Sbjct: 121 LNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRT 180

Query: 445 ITSLD 449
           +  L+
Sbjct: 181 LEILE 185



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 91/179 (50%)

Query: 180 FFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLC 239
             LAE+L  NQ  E +   +N I+  G+      L +N  L +LNL  N I  EG + L 
Sbjct: 1   MALAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALA 60

Query: 240 DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALL 299
             L  N  ++ L L++  L D+GA+AIA  +  N  L  L L  N I      +L +AL 
Sbjct: 61  QALCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQ 120

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
            N T+ +L L  N  G  GA+++A  L+ N +L  L+L   SIG +G +AL   L+  +
Sbjct: 121 LNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNR 179



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 1/160 (0%)

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           +A+ALK N+ +  +DL  N I + G + + R L  N  ++SL+L  N I  +GA+AL++ 
Sbjct: 3   LAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQA 62

Query: 467 LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
           L  +  +  L L    +   GA+ +A  +  N +++ L L+ N ++   A+ L Q+ ++ 
Sbjct: 63  LCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQL- 121

Query: 527 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
           N  LT++DL  N I D+GA ++A ALK N  +    L +A
Sbjct: 122 NRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVA 161



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 54/117 (46%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              +D++     D+G   +A ++G N +   +    N I A   +A    LQ N  L TL
Sbjct: 69  LKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQLNRTLTTL 128

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           +L  N IGDEG   +   L  N  +  L L    +  +GA+A+ E L  N  L +LE
Sbjct: 129 DLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRTLEILE 185



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 28/182 (15%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K  +   ++D+      + G+  L  +L  NQT   ++   N I+  G +A    
Sbjct: 3   LAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQA 62

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL-------------------- 253
           L  N  LK L+L+ N + D+G + +   + +N  +  L L                    
Sbjct: 63  LCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQLN 122

Query: 254 ---SSVDLR-----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
              +++DL+     DEGA ++A  LK N+ L  L L    I   G  +L EAL  N T+ 
Sbjct: 123 RTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRTLE 182

Query: 306 SL 307
            L
Sbjct: 183 IL 184


>gi|426219357|ref|XP_004003892.1| PREDICTED: leucine-rich repeat-containing protein 34 [Ovis aries]
          Length = 622

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 119/253 (47%), Gaps = 36/253 (14%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N +S  GA++ A+ ++   +L+++NL  NDIG EG E IA AL +NRT+  + + 
Sbjct: 286 LDVRYNLLSDVGAYYAAKLLQKQHNLIYLNLMFNDIGPEGGELIAKALHKNRTLKHLRMT 345

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL------- 476
           GN I +KG    A +L+ NS +  LDL    +G     A + VL  +  I  L       
Sbjct: 346 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNRTIKGLNLNRPIL 405

Query: 477 ----------------------KLGWCQ--IGASGAEFVADMLRYNNTISILDLRANGLR 512
                                 +L  C+  I   G + + D L  N ++  LD+  N + 
Sbjct: 406 YGEQEESTVHLGHMLKENQCLVELHMCKHDIKNCGMKQLCDALYLNRSLQYLDVSCNKIT 465

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN----EDVAVTSLNLANN 568
            +G KCLA   K  N  L  IDL+FN + + GA  ++ AL ++    + ++V S N+   
Sbjct: 466 QDGMKCLADVLK-SNTTLEVIDLSFNRMENAGANYLSDALASHNRTLKALSVVSNNIEGK 524

Query: 569 FLTKFGQSALTDA 581
            L    QS  T+ 
Sbjct: 525 GLVALSQSMKTNP 537



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 160/339 (47%), Gaps = 9/339 (2%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           NIA  + +LSG  +  E    LC +L +N+ +  L +    L D GA   A+LL+    L
Sbjct: 252 NIAGNSRSLSGERVTGEDFWILCRVLKNNSYINGLDVRYNLLSDVGAYYAAKLLQKQHNL 311

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L  N I   G   +A+AL +N T++ L + GN     G    A  L+ N SL +L 
Sbjct: 312 IYLNLMFNDIGPEGGELIAKALHKNRTLKHLRMTGNKIENKGGMFFAAMLQINSSLEKLD 371

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI----SAKGAFHVAEYIKNCKSLLWI 392
           L    +G + + A  + L+  +  +  L++ N  I      +   H+   +K  + L+ +
Sbjct: 372 LGDCDLGMQSVIAFATVLTQNR-TIKGLNL-NRPILYGEQEESTVHLGHMLKENQCLVEL 429

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++  +DI + G +++ DAL  NR++  +D+  N I   G   +A VLK N+ +  +DL++
Sbjct: 430 HMCKHDIKNCGMKQLCDALYLNRSLQYLDVSCNKITQDGMKCLADVLKSNTTLEVIDLSF 489

Query: 453 NPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           N +   GA  LS+ L  H   +  L +    I   G   ++  ++ N T+S + +  N  
Sbjct: 490 NRMENAGANYLSDALASHNRTLKALSVVSNNIEGKGLVALSQSMKTNPTLSHIYIWGNKF 549

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
            DE A C+A S  +    L S +        DG   +A+
Sbjct: 550 -DE-ATCVAYSDLIHTGRLKSDNTDVEPFVVDGHVYLAE 586



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 151/330 (45%), Gaps = 15/330 (4%)

Query: 152 QTLNEFAKELR----------AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           Q L E  KE+           A +S  +SG     E  + L   L  N     +    N 
Sbjct: 233 QILQEVDKEIEKGSVGITLNIAGNSRSLSGERVTGEDFWILCRVLKNNSYINGLDVRYNL 292

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           ++  G      +LQ    L  LNL  N IG EG + +   L  N  ++ L+++   + ++
Sbjct: 293 LSDVGAYYAAKLLQKQHNLIYLNLMFNDIGPEGGELIAKALHKNRTLKHLRMTGNKIENK 352

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--YGGALGA 319
           G    A +L+ NS L  L+L +  +      + A  L +N TI+ L+LN    YG    +
Sbjct: 353 GGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNRTIKGLNLNRPILYGEQEES 412

Query: 320 NA-LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              L   L+ N+ L ELH+  + I + G++ L   L   +  L  LD+  N I+  G   
Sbjct: 413 TVHLGHMLKENQCLVELHMCKHDIKNCGMKQLCDALYLNR-SLQYLDVSCNKITQDGMKC 471

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIAR 437
           +A+ +K+  +L  I+L  N + + GA  ++DAL   NRT+  + +  NNI  KG  A+++
Sbjct: 472 LADVLKSNTTLEVIDLSFNRMENAGANYLSDALASHNRTLKALSVVSNNIEGKGLVALSQ 531

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            +K N  ++ + +  N        A S+++
Sbjct: 532 SMKTNPTLSHIYIWGNKFDEATCVAYSDLI 561



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 9/299 (3%)

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           F  L   L  NS I  L +  N    +GA   AK L+   +L  L+L  N IG EG   +
Sbjct: 270 FWILCRVLKNNSYINGLDVRYNLLSDVGAYYAAKLLQKQHNLIYLNLMFNDIGPEGGELI 329

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              L   +  L  L +  N I  KG    A  ++   SL  ++L   D+G +     A  
Sbjct: 330 AKALHKNR-TLKHLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFATV 388

Query: 411 LKQNRTITTIDLGGNNIHSKGASA---IARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           L QNRTI  ++L    ++ +   +   +  +LK+N  +  L +  + I   G K L + L
Sbjct: 389 LTQNRTIKGLNLNRPILYGEQEESTVHLGHMLKENQCLVELHMCKHDIKNCGMKQLCDAL 448

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
             + ++  L +   +I   G + +AD+L+ N T+ ++DL  N + + GA  L+ +    N
Sbjct: 449 YLNRSLQYLDVSCNKITQDGMKCLADVLKSNTTLEVIDLSFNRMENAGANYLSDALASHN 508

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 586
             L ++ +  N I   G  A++Q++K N  ++   +     +  KF ++      DL++
Sbjct: 509 RTLKALSVVSNNIEGKGLVALSQSMKTNPTLSHIYI-----WGNKFDEATCVAYSDLIH 562



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 1/164 (0%)

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           D+  EK +  +  N    +  L G  +  +    + RVLK+NS I  LD+ YN +   GA
Sbjct: 239 DKEIEKGSVGITLNIAGNSRSLSGERVTGEDFWILCRVLKNNSYINGLDVRYNLLSDVGA 298

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
              +++L+   N+  L L +  IG  G E +A  L  N T+  L +  N + ++G    A
Sbjct: 299 YYAAKLLQKQHNLIYLNLMFNDIGPEGGELIAKALHKNRTLKHLRMTGNKIENKGGMFFA 358

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
              + +N +L  +DL   ++      A A  L  N  +   +LN
Sbjct: 359 AMLQ-INSSLEKLDLGDCDLGMQSVIAFATVLTQNRTIKGLNLN 401



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 7/183 (3%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           ES   L    KE +    + M   +  + G+  L ++L  N++ + +  + N IT  G+K
Sbjct: 411 ESTVHLGHMLKENQCLVELHMCKHDIKNCGMKQLCDALYLNRSLQYLDVSCNKITQDGMK 470

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAIA 267
               VL+SN  L+ ++LS N + + G   L D L   N  ++ L + S ++  +G  A++
Sbjct: 471 CLADVLKSNTTLEVIDLSFNRMENAGANYLSDALASHNRTLKALSVVSNNIEGKGLVALS 530

Query: 268 ELLKNNSILRVLELNNNMID------YSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           + +K N  L  + +  N  D      YS          +N+ +    ++G+   A  +N 
Sbjct: 531 QSMKTNPTLSHIYIWGNKFDEATCVAYSDLIHTGRLKSDNTDVEPFVVDGHVYLAEVSNG 590

Query: 322 LAK 324
           L +
Sbjct: 591 LKR 593


>gi|399498068|emb|CCG20362.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSETLEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E +  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEASSAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSETLEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K  +   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLFQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  +  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSETLEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSETLEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|397620649|gb|EJK65827.1| hypothetical protein THAOC_13276 [Thalassiosira oceanica]
          Length = 1478

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 100/183 (54%), Gaps = 3/183 (1%)

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           AL  N T+ +L+L+ N   + GA+++A  L G   LRE+ + GN +GD GIR L   L  
Sbjct: 269 ALRINKTVTTLNLSHNRISSKGASSIATSLTGTSVLREVDVSGNHLGDGGIRHLSEALPY 328

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
            K  L VL++  NSI+  G   +AE I N  SL  +NL  N IGD  A  +   L  N  
Sbjct: 329 AKS-LKVLELEENSITDAGVLSLAETI-NESSLERLNLNGNQIGD-AASSLFKHLASNEK 385

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +TT++L  N I  KGA+ +A  L DN  + ++DL  N +   GA  L +VL+ +  +  L
Sbjct: 386 MTTLELNSNKISDKGATELASALLDNETLLAVDLGENEVTNRGANDLLKVLRVNDTLEEL 445

Query: 477 KLG 479
           +L 
Sbjct: 446 ELA 448



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 3/210 (1%)

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           D+     + LS   L D     +   L+ N  +  L L++N I   G +S+A +L   S 
Sbjct: 244 DDPAFTSISLSREKLTDGDIVPLLGALRINKTVTTLNLSHNRISSKGASSIATSLTGTSV 303

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           +R + ++GN+ G  G   L++ L   KSL+ L L  NSI D G+ +L   ++  +  L  
Sbjct: 304 LREVDVSGNHLGDGGIRHLSEALPYAKSLKVLELEENSITDAGVLSLAETIN--ESSLER 361

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L++  N I    A  + +++ + + +  + L  N I D+GA ++A AL  N T+  +DLG
Sbjct: 362 LNLNGNQI-GDAASSLFKHLASNEKMTTLELNSNKISDKGATELASALLDNETLLAVDLG 420

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYN 453
            N + ++GA+ + +VL+ N  +  L+LA N
Sbjct: 421 ENEVTNRGANDLLKVLRVNDTLEELELAGN 450



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 93/189 (49%), Gaps = 31/189 (16%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+SG + GD G+  L+E+L Y ++ + +    N IT AG+ +    +  + +L+ LNL+
Sbjct: 307 VDVSGNHLGDGGIRHLSEALPYAKSLKVLELEENSITDAGVLSLAETINES-SLERLNLN 365

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN IGD                              A ++ + L +N  +  LELN+N I
Sbjct: 366 GNQIGD-----------------------------AASSLFKHLASNEKMTTLELNSNKI 396

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN-SIGDE 345
              G T LA ALL+N T+ ++ L  N     GAN L K L  N +L EL L GN S+ DE
Sbjct: 397 SDKGATELASALLDNETLLAVDLGENEVTNRGANDLLKVLRVNDTLEELELAGNASVTDE 456

Query: 346 GIRALMSGL 354
            +  + + L
Sbjct: 457 MMEMIQAVL 465



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 95/169 (56%), Gaps = 5/169 (2%)

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           AL+ N+T+TT++L  N I SKGAS+IA  L   SV+  +D++ N +G  G + LSE L +
Sbjct: 269 ALRINKTVTTLNLSHNRISSKGASSIATSLTGTSVLREVDVSGNHLGDGGIRHLSEALPY 328

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
             ++  L+L    I  +G   +A+ +   +++  L+L  N + D  A  L +     NE 
Sbjct: 329 AKSLKVLELEENSITDAGVLSLAETIN-ESSLERLNLNGNQIGD-AASSLFKHL-ASNEK 385

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           +T+++L  N+I D GA  +A AL  NE   + +++L  N +T  G + L
Sbjct: 386 MTTLELNSNKISDKGATELASALLDNE--TLLAVDLGENEVTNRGANDL 432



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 119/239 (49%), Gaps = 5/239 (2%)

Query: 320 NALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           +AL K L + + +   + L    + D  I  L+  L   K  +  L++ +N IS+KGA  
Sbjct: 235 SALIKRLGDDDPAFTSISLSREKLTDGDIVPLLGALRINK-TVTTLNLSHNRISSKGASS 293

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A  +     L  +++  N +GD G   +++AL   +++  ++L  N+I   G  ++A  
Sbjct: 294 IATSLTGTSVLREVDVSGNHLGDGGIRHLSEALPYAKSLKVLELEENSITDAGVLSLAET 353

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           + ++S +  L+L  N IG D A +L + L  +  + TL+L   +I   GA  +A  L  N
Sbjct: 354 INESS-LERLNLNGNQIG-DAASSLFKHLASNEKMTTLELNSNKISDKGATELASALLDN 411

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
            T+  +DL  N + + GA  L +  + VN+ L  ++LA N    D    + QA+   ED
Sbjct: 412 ETLLAVDLGENEVTNRGANDLLKVLR-VNDTLEELELAGNASVTDEMMEMIQAVLGEED 469


>gi|399497834|emb|CCG20245.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHIHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA++LK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHIHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKLLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N   DEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +  +
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGH--I 439

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 440 HLIEVDMSSNALRRAGARVL 459



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 134/283 (47%), Gaps = 5/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S ++ L+L+ N  G  G  A  K L+   +L EL L  + I  E   A+   + S +
Sbjct: 211 LEGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN  + +GA  +AE +K    L         +G EG   + +AL     + 
Sbjct: 271 -KLKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +    + + L  +  +T + L+Y  +  +GA A++  LK    ++  L+
Sbjct: 330 KLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLE 389

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I A  A  +A  +     ++ L L  N L+DEGA  +A++ +  +  L  +D++ 
Sbjct: 390 MAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEG-HIHLIEVDMSS 448

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L  +NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A+  ++     +  L    N    +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVCELVPSTEKLKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AIA +LK +   ++  L +A N +T
Sbjct: 369 EGAIAIANSLK-DSAPSLAVLEMAGNDIT 396


>gi|297812113|ref|XP_002873940.1| RANGAP2 [Arabidopsis lyrata subsp. lyrata]
 gi|297319777|gb|EFH50199.1| RANGAP2 [Arabidopsis lyrata subsp. lyrata]
          Length = 543

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 139/275 (50%), Gaps = 1/275 (0%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S  +L+ L L  + I  E  + + +++     +  L   
Sbjct: 217 LNLSENALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVLHFH 276

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G  +L+EAL   + +  L L  N  
Sbjct: 277 NNMSGDEGALAIAEVVKRSPLLENFRCSSTRVGSEGGIALSEALEHCTHMEKLDLRDNMF 336

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     +L+K L   K L EL+L   ++ DEG  A+++ L      + VL++  N I+ +
Sbjct: 337 GTEAGVSLSKTLSSFKHLTELYLSYLNLEDEGAIAIVNALKESASPIEVLEMAGNDITVE 396

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
            A  +A  +   + L  +NL  N++ DEG  +IA +++++ + +  ID+  N I   GA 
Sbjct: 397 AASAIAACVAAKQDLKKLNLSENELKDEGCVQIAKSMEEDHSKLQYIDMSTNFIRRAGAR 456

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           A+A V+        L++  N I  +G + L E+ K
Sbjct: 457 ALAHVVVKKEAFKLLNIDGNIISEEGIEELKEIFK 491



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 160/326 (49%), Gaps = 32/326 (9%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F   LQ +I L +LNLS N +G++GV+    +L   + +E L L +  +  E A+A++EL
Sbjct: 205 FSDALQGSI-LSSLNLSENALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSEL 263

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           + +   LRVL  +NNM    G  ++AE +  +  + +   +    G+ G  AL++ LE  
Sbjct: 264 IPSTENLRVLHFHNNMSGDEGALAIAEVVKRSPLLENFRCSSTRVGSEGGIALSEALEHC 323

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             + +L L  N  G E   +L   LSS K                   H+ E        
Sbjct: 324 THMEKLDLRDNMFGTEAGVSLSKTLSSFK-------------------HLTE-------- 356

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L+++ Y+N + DEGA  I +ALK++ + I  +++ GN+I  + ASAIA  +     +  L
Sbjct: 357 LYLS-YLN-LEDEGAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLKKL 414

Query: 449 DLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           +L+ N +  +G   +++ ++  H  +  + +    I  +GA  +A ++       +L++ 
Sbjct: 415 NLSENELKDEGCVQIAKSMEEDHSKLQYIDMSTNFIRRAGARALAHVVVKKEAFKLLNID 474

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSI 533
            N + +EG + L + FK   E L ++
Sbjct: 475 GNIISEEGIEELKEIFKKSPELLGAL 500



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 139/293 (47%), Gaps = 39/293 (13%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRA---LMSGLSSRKGKLAVLDIGNNSISAKGA 376
           N  +  L+G+  L  L+L  N++G++G+RA   L+  LSS    L  L + N+ IS + A
Sbjct: 203 NIFSDALQGS-ILSSLNLSENALGEKGVRAFGALLKSLSS----LEELYLMNDGISKEAA 257

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             V+E I + ++L  ++ + N  GDEGA  IA+ +K++  +         + S+G  A++
Sbjct: 258 QAVSELIPSTENLRVLHFHNNMSGDEGALAIAEVVKRSPLLENFRCSSTRVGSEGGIALS 317

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             L+  + +  LDL  N  G +   +LS+ L    ++  L L +  +   GA  + + L+
Sbjct: 318 EALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHLTELYLSYLNLEDEGAIAIVNALK 377

Query: 497 YN-----------NTISI------------------LDLRANGLRDEGAKCLAQSFKVVN 527
            +           N I++                  L+L  N L+DEG   +A+S +  +
Sbjct: 378 ESASPIEVLEMAGNDITVEAASAIAACVAAKQDLKKLNLSENELKDEGCVQIAKSMEEDH 437

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
             L  ID++ N IR  GA A+A  +   E  A   LN+  N +++ G   L +
Sbjct: 438 SKLQYIDMSTNFIRRAGARALAHVVVKKE--AFKLLNIDGNIISEEGIEELKE 488



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 3/245 (1%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           +E+ Q ++E          +       GDEG   +AE +  +   E    ++  + + G 
Sbjct: 254 KEAAQAVSELIPSTENLRVLHFHNNMSGDEGALAIAEVVKRSPLLENFRCSSTRVGSEGG 313

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
            A    L+    ++ L+L  N  G E    L   L     +  L LS ++L DEGA AI 
Sbjct: 314 IALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHLTELYLSYLNLEDEGAIAIV 373

Query: 268 ELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
             LK + S + VLE+  N I     +++A  +     ++ L+L+ N     G   +AK +
Sbjct: 374 NALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLKKLNLSENELKDEGCVQIAKSM 433

Query: 327 EGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           E + S L+ + +  N I   G RAL + +  +K    +L+I  N IS +G   + E  K 
Sbjct: 434 EEDHSKLQYIDMSTNFIRRAGARAL-AHVVVKKEAFKLLNIDGNIISEEGIEELKEIFKK 492

Query: 386 CKSLL 390
              LL
Sbjct: 493 SPELL 497


>gi|426390339|ref|XP_004061562.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 5, partial
            [Gorilla gorilla gorilla]
          Length = 1160

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 178/416 (42%), Gaps = 33/416 (7%)

Query: 169  MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSG 227
            M G+   +E        LG +    ++   ++ +T   +K     L+     ++TL    
Sbjct: 720  MRGKTLIEEQWEDFCSVLGTHPHLRQLDLGSSILTERAMKTLCAKLRHPTCKIQTLMFRN 779

Query: 228  NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
              I   GV+ L  IL+ N  +  L L    L++E  +   E LK+   L    L +  +D
Sbjct: 780  AQI-TPGVQHLWRILMANRNLRSLNLGGTHLKEEDVRMACEALKHPKCL----LESLRLD 834

Query: 288  YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
              G T      L+ S I                     L  + SL+ L L GN + D+G+
Sbjct: 835  CCGLTH--ACYLKISQI---------------------LTTSPSLKSLSLAGNKVTDQGV 871

Query: 348  RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
              L   L   +  L  L + +  I+A G   +A  + + +SL  + L  N +G+EG   +
Sbjct: 872  TPLSDVLRVSQCALQKLILEDCGITATGCQSLASALVSNRSLTHLCLSNNSLGNEGVNLL 931

Query: 408  ADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
              +++  + ++  + L   ++ + G   +A  L  NS +T L L+ NP+  +G K L EV
Sbjct: 932  CRSMRLPHCSLQRLMLNQCHLDTAGCGFLALALMGNSWLTHLSLSMNPVEDNGVKLLCEV 991

Query: 467  LKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            ++    ++  L+L  C + A+  E ++ ++  +  +  LDL  N L D G   L +  K 
Sbjct: 992  MREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSLDLTDNALGDGGVAALCEGLKQ 1051

Query: 526  VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             N  LT + L    +  D   A++ AL  N    +TSLNL  N  +  G   L  A
Sbjct: 1052 KNSVLTRLGLKACGLTADCCEALSLALSCNRH--LTSLNLVQNNFSPKGMMKLCSA 1105



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 148/328 (45%), Gaps = 4/328 (1%)

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDL 258
            N     G++    +L +N  L++LNL G  + +E V+  C+ L      +E L+L    L
Sbjct: 779  NAQITPGVQHLWRILMANRNLRSLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDCCGL 838

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGAL 317
                   I+++L  +  L+ L L  N +   G T L++ L +    ++ L L      A 
Sbjct: 839  THACYLKISQILTTSPSLKSLSLAGNKVTDQGVTPLSDVLRVSQCALQKLILEDCGITAT 898

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            G  +LA  L  N+SL  L L  NS+G+EG+  L   +      L  L +    +   G  
Sbjct: 899  GCQSLASALVSNRSLTHLCLSNNSLGNEGVNLLCRSMRLPHCSLQRLMLNQCHLDTAGCG 958

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIA 436
             +A  +     L  ++L MN + D G + + + +++    +  ++L   ++ +    +++
Sbjct: 959  FLALALMGNSWLTHLSLSMNPVEDNGVKLLCEVMREPSCHLQDLELVKCHLTAACCESLS 1018

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT-LKLGWCQIGASGAEFVADML 495
             V+  +  + SLDL  N +G  G  AL E LK   ++ T L L  C + A   E ++  L
Sbjct: 1019 CVISRSRHLKSLDLTDNALGDGGVAALCEGLKQKNSVLTRLGLKACGLTADCCEALSLAL 1078

Query: 496  RYNNTISILDLRANGLRDEGAKCLAQSF 523
              N  ++ L+L  N    +G   L  +F
Sbjct: 1079 SCNRHLTSLNLVQNNFSPKGMMKLCSAF 1106


>gi|410898359|ref|XP_003962665.1| PREDICTED: uncharacterized protein C14orf166B homolog [Takifugu
           rubripes]
          Length = 633

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 133/270 (49%), Gaps = 2/270 (0%)

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            + N  + ++ L+ +  G LG  ALA  L  +  +  L L  N I  EG + L+  L + 
Sbjct: 61  FIRNHALPTMTLSHHGLGPLGCKALAFALVSDMHINTLELADNQIQAEGAKYLLEMLRA- 119

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
              +  LD+ NN + + GA +VA+ + +  SL  + L  N+  D+ A+   DAL     +
Sbjct: 120 NFTIHHLDLSNNGLKSAGARYVAQMLLDNVSLKILKLSGNEFTDDDAKYFGDALSITSRL 179

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
             +DL  N    KG   + ++L +N  +  LDL++N I   GA A    L+ +  +  L 
Sbjct: 180 KELDLSHNEFRGKGGEHLGQLLANNEGVEVLDLSWNHIRMKGAVAFCAGLRVNTGLKHLD 239

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           L W   G  GA  + + L++N T+  L+L  N L +EG   L++  +  N+ L  + LA+
Sbjct: 240 LSWNGFGNEGALALGEALKFNTTLVHLNLNNNRLTNEGVGMLSRGLE-HNDTLQILQLAY 298

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           N +  +GA A+   +K     A+  +++ N
Sbjct: 299 NSVTVEGALALLTVVKKASQTALEEIDICN 328



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 143/321 (44%), Gaps = 58/321 (18%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N AL T+ LS + +G  G K L   LV +  +  L+L+   ++ EGAK + E+L+ N  +
Sbjct: 64  NHALPTMTLSHHGLGPLGCKALAFALVSDMHINTLELADNQIQAEGAKYLLEMLRANFTI 123

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L+L+NN +  +G   +A+ LL+                            N SL+ L 
Sbjct: 124 HHLDLSNNGLKSAGARYVAQMLLD----------------------------NVSLKILK 155

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           L GN   D+  +     LS    +L  LD+ +N    KG  H+ + + N           
Sbjct: 156 LSGNEFTDDDAKYFGDALSI-TSRLKELDLSHNEFRGKGGEHLGQLLAN----------- 203

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
               +EG E              +DL  N+I  KGA A    L+ N+ +  LDL++N  G
Sbjct: 204 ----NEGVE-------------VLDLSWNHIRMKGAVAFCAGLRVNTGLKHLDLSWNGFG 246

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            +GA AL E LKF+  +  L L   ++   G   ++  L +N+T+ IL L  N +  EGA
Sbjct: 247 NEGALALGEALKFNTTLVHLNLNNNRLTNEGVGMLSRGLEHNDTLQILQLAYNSVTVEGA 306

Query: 517 KCLAQSFKVVNE-ALTSIDLA 536
             L    K  ++ AL  ID+ 
Sbjct: 307 LALLTVVKKASQTALEEIDIC 327



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 29/280 (10%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     ++ + +G+   G KA    L S++ + TL L+ N I  EG K L ++L  N  +
Sbjct: 64  NHALPTMTLSHHGLGPLGCKALAFALVSDMHINTLELADNQIQAEGAKYLLEMLRANFTI 123

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
             L LS+  L+  GA+ +A++L +N  L++L+L+ N           +AL   S ++ L 
Sbjct: 124 HHLDLSNNGLKSAGARYVAQMLLDNVSLKILKLSGNEFTDDDAKYFGDALSITSRLKELD 183

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N     G   L + L  N               EG+               VLD+  
Sbjct: 184 LSHNEFRGKGGEHLGQLLANN---------------EGVE--------------VLDLSW 214

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I  KGA      ++    L  ++L  N  G+EGA  + +ALK N T+  ++L  N + 
Sbjct: 215 NHIRMKGAVAFCAGLRVNTGLKHLDLSWNGFGNEGALALGEALKFNTTLVHLNLNNNRLT 274

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           ++G   ++R L+ N  +  L LAYN +  +GA AL  V+K
Sbjct: 275 NEGVGMLSRGLEHNDTLQILQLAYNSVTVEGALALLTVVK 314



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 1/221 (0%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            ++++++      EG  +L E L  N T   +  + NG+ +AG +    +L  N++LK L
Sbjct: 95  INTLELADNQIQAEGAKYLLEMLRANFTIHHLDLSNNGLKSAGARYVAQMLLDNVSLKIL 154

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            LSGN   D+  K   D L   + ++ L LS  + R +G + + +LL NN  + VL+L+ 
Sbjct: 155 KLSGNEFTDDDAKYFGDALSITSRLKELDLSHNEFRGKGGEHLGQLLANNEGVEVLDLSW 214

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  +    L  N+ ++ L L+ N  G  GA AL + L+ N +L  L+L+ N + 
Sbjct: 215 NHIRMKGAVAFCAGLRVNTGLKHLDLSWNGFGNEGALALGEALKFNTTLVHLNLNNNRLT 274

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
           +EG+  L  GL      L +L +  NS++ +GA  +   +K
Sbjct: 275 NEGVGMLSRGL-EHNDTLQILQLAYNSVTVEGALALLTVVK 314


>gi|399498030|emb|CCG20343.1| Ran GTPase activating protein 2 [Solanum stenotomum]
          Length = 553

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E +  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEASSAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 5/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S ++ L+L+ N  G  G  A  K  +   +L EL L  + I  E   A+ S L    
Sbjct: 211 LEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAV-SELVPST 269

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE +K    L         +G EG   + +AL     + 
Sbjct: 270 EKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +    + + L  +  +T + L+Y  +  +GA A++  LK    ++  L+
Sbjct: 330 KLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLE 389

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I A  +  +A  +     ++ L L  N L+DEGA  +A++ +  +  L  +D++ 
Sbjct: 390 MAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSS 448

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|157863880|ref|XP_001687491.1| conserved hypothetical protein [Leishmania major strain Friedlin]
 gi|68223702|emb|CAJ01931.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 441

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 175/384 (45%), Gaps = 57/384 (14%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           K +  VLQ       ++L+G  +G  G   +   L+ N  V  L LS  +L D GA AIA
Sbjct: 28  KKWKSVLQET----RVDLAGRALGPRGALIVGTALLKNTYVTSLDLSQNELGDGGAIAIA 83

Query: 268 ELLKNNSILRVLEL-NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
            +L+ N+ L+ L L +N+M D  G  +LA A + N     +  +G  G            
Sbjct: 84  SMLRTNTQLQHLNLSHNDMTDIGGI-ALASAFIPN-----VSPSGQPG------------ 125

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKN 385
           + N++L  L L GN +GD+ + A MS  ++    L  +D+  N +   G   +   Y +N
Sbjct: 126 QWNRTLFSLVLMGNQLGDDTLLA-MSNAAACHRDLTRVDLSWNKVGQNGTKCLMRAYQRN 184

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQ--NRTITTIDLGGNNIHSKGASAIARVLKDNS 443
              L    L  N +GDEG   + +AL++   ++ TT++L  N I   G  A+ R+L ++S
Sbjct: 185 --PLCVYQLAANALGDEGTVYLCEALQRYGGKSQTTLNLYRNAISCPGTEAVGRLLANSS 242

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           ++  + LA N IG  G +AL   L                  + A  +A       ++ I
Sbjct: 243 IVQDVSLAGNTIGFKGVQALQRQL------------------TDAAVIASC-----SLRI 279

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           L+L  N + DEGA  +A   K    +L  +D++ N+I D GA AI  A   N     T L
Sbjct: 280 LNLSNNWIGDEGAASVAAIIKANIPSLERLDVSENKITDVGATAIVTAALQN-----THL 334

Query: 564 NLANNFLTKFGQSALTDAKDLVYE 587
            L N      G  A+     L++E
Sbjct: 335 LLLNCEANHLGAKAVDAVVQLIHE 358



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 147/319 (46%), Gaps = 19/319 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA---- 219
            +S+D+S    GD G   +A  L  N   + ++ + N +T  G  A       N++    
Sbjct: 64  VTSLDLSQNELGDGGAIAIASMLRTNTQLQHLNLSHNDMTDIGGIALASAFIPNVSPSGQ 123

Query: 220 -------LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
                  L +L L GN +GD+ +  + +    +  + R+ LS   +   G K +    + 
Sbjct: 124 PGQWNRTLFSLVLMGNQLGDDTLLAMSNAAACHRDLTRVDLSWNKVGQNGTKCLMRAYQR 183

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLE--NSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           N  L V +L  N +   G   L EAL      +  +L+L  N     G  A+ + L  + 
Sbjct: 184 NP-LCVYQLAANALGDEGTVYLCEALQRYGGKSQTTLNLYRNAISCPGTEAVGRLLANSS 242

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSS----RKGKLAVLDIGNNSISAKGAFHVAEYIK-N 385
            ++++ L GN+IG +G++AL   L+         L +L++ NN I  +GA  VA  IK N
Sbjct: 243 IVQDVSLAGNTIGFKGVQALQRQLTDAAVIASCSLRILNLSNNWIGDEGAASVAAIIKAN 302

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             SL  +++  N I D GA  I  A  QN  +  ++   N++ +K   A+ +++ +   +
Sbjct: 303 IPSLERLDVSENKITDVGATAIVTAALQNTHLLLLNCEANHLGAKAVDAVVQLIHETRTL 362

Query: 446 TSLDLAYNPIGADGAKALS 464
           TSL++A     AD  + L+
Sbjct: 363 TSLNVAGCVNSADHRRTLT 381



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 134/319 (42%), Gaps = 31/319 (9%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R   S+ + G   GD+ L  ++ +   ++    V  + N +   G K      Q N  L 
Sbjct: 129 RTLFSLVLMGNQLGDDTLLAMSNAAACHRDLTRVDLSWNKVGQNGTKCLMRAYQRN-PLC 187

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVER--LQLSSVDLRDEGAKAIAELLKNNSILRVL 279
              L+ N +GDEG   LC+ L    G  +  L L    +   G +A+  LL N+SI++ +
Sbjct: 188 VYQLAANALGDEGTVYLCEALQRYGGKSQTTLNLYRNAISCPGTEAVGRLLANSSIVQDV 247

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L  N I + G  +L   L + + I S                        SLR L+L  
Sbjct: 248 SLAGNTIGFKGVQALQRQLTDAAVIASC-----------------------SLRILNLSN 284

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG  ++ + + +    L  LD+  N I+  GA  +         LL +N   N +
Sbjct: 285 NWIGDEGAASVAAIIKANIPSLERLDVSENKITDVGATAIVTAALQNTHLLLLNCEANHL 344

Query: 400 GDEGAEKIADALKQNRTITTIDLGG--NNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           G +  + +   + + RT+T++++ G  N+   +    IA    D      ++L  NP  A
Sbjct: 345 GAKAVDAVVQLIHETRTLTSLNVAGCVNSADHRRTLTIAVGETDG---LHVELGPNPEDA 401

Query: 458 DGAKALSEVLKFHGNINTL 476
            GA+  + + K   ++  L
Sbjct: 402 AGAEGTALIEKITEHLQML 420



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 17/221 (7%)

Query: 373 AKGAFHVAEYIKN-CKSLLW---INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           AKG      Y K   KS+L    ++L    +G  GA  +  AL +N  +T++DL  N + 
Sbjct: 16  AKGEKSTGFYTKKKWKSVLQETRVDLAGRALGPRGALIVGTALLKNTYVTSLDLSQNELG 75

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-----------KFHGNINTLK 477
             GA AIA +L+ N+ +  L+L++N +   G  AL+              +++  + +L 
Sbjct: 76  DGGAIAIASMLRTNTQLQHLNLSHNDMTDIGGIALASAFIPNVSPSGQPGQWNRTLFSLV 135

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           L   Q+G      +++    +  ++ +DL  N +   G KCL ++++     L    LA 
Sbjct: 136 LMGNQLGDDTLLAMSNAAACHRDLTRVDLSWNKVGQNGTKCLMRAYQ--RNPLCVYQLAA 193

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           N + D+G   + +AL+     + T+LNL  N ++  G  A+
Sbjct: 194 NALGDEGTVYLCEALQRYGGKSQTTLNLYRNAISCPGTEAV 234



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 15/190 (7%)

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           T +DL G  +  +GA  +   L  N+ +TSLDL+ N +G  GA A++ +L+ +  +  L 
Sbjct: 37  TRVDLAGRALGPRGALIVGTALLKNTYVTSLDLSQNELGDGGAIAIASMLRTNTQLQHLN 96

Query: 478 LG---WCQIG--ASGAEFVADML------RYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
           L       IG  A  + F+ ++       ++N T+  L L  N L D+    ++ +    
Sbjct: 97  LSHNDMTDIGGIALASAFIPNVSPSGQPGQWNRTLFSLVLMGNQLGDDTLLAMSNA-AAC 155

Query: 527 NEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 586
           +  LT +DL++N++  +G   + +A + N    +    LA N L   G   L +A     
Sbjct: 156 HRDLTRVDLSWNKVGQNGTKCLMRAYQRNP---LCVYQLAANALGDEGTVYLCEALQRYG 212

Query: 587 EMSEKEVNIF 596
             S+  +N++
Sbjct: 213 GKSQTTLNLY 222


>gi|443707721|gb|ELU03190.1| hypothetical protein CAPTEDRAFT_107434 [Capitella teleta]
          Length = 330

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 153/316 (48%), Gaps = 31/316 (9%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           + F   G+TAA        L  N+   +L +  + +G +G K L   L +N   E + LS
Sbjct: 1   MKFLFTGLTAASF------LVRNLGEGSLKMRHHYLGGQGTKPLAVALKENTVCEEIDLS 54

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
              +  +GA A+A++LK N  +  L ++NN +   G  + AE L  N+T+++L L GN  
Sbjct: 55  DNYVEGDGASALAKMLKENMFIVNLNISNNFMRSIGAHAFAEMLEVNTTLKTLSLQGNQL 114

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
               A  L++ L  N SL  L L  N+ G+ G   L +G++   G LA +D+  N I  K
Sbjct: 115 SDNDALRLSEALRANMSLSVLDLSHNNFGELGGVYLGNGIAGNIG-LADIDLSWNGIREK 173

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++   SL  ++L  N +G  G   IA AL+ N+++  +D+  N + ++    
Sbjct: 174 GALSIAKALQKNSSLETLDLSWNGLGHTGGIAIAQALRVNKSLRVLDISNNRLTTEAGKK 233

Query: 435 IARVLKDN----SVITSLDLAY-------------NPIGADGAKAL------SEVLKFHG 471
           + + +  N    +++ S+D+ +             NPIG +G  A+      +  LK  G
Sbjct: 234 LGQAIGKNEALETLLVSIDMMHCSLLITCNYQMGMNPIGYEGVDAMLKGVATNPSLKLIG 293

Query: 472 NINTLKLGWCQIGASG 487
            I   +  + Q G SG
Sbjct: 294 -IEVSQTAFTQTGTSG 308



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 145/308 (47%), Gaps = 18/308 (5%)

Query: 288 YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
           ++G T+ A  L+ N    SL +  +Y G  G   LA  L+ N    E+ L  N +  +G 
Sbjct: 5   FTGLTA-ASFLVRNLGEGSLKMRHHYLGGQGTKPLAVALKENTVCEEIDLSDNYVEGDGA 63

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            AL   L      +  L+I NN + + GA   AE ++   +L  ++L  N + D  A ++
Sbjct: 64  SALAKMLKENM-FIVNLNISNNFMRSIGAHAFAEMLEVNTTLKTLSLQGNQLSDNDALRL 122

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           ++AL+ N +++ +DL  NN    G   +   +  N  +  +DL++N I   GA ++++ L
Sbjct: 123 SEALRANMSLSVLDLSHNNFGELGGVYLGNGIAGNIGLADIDLSWNGIREKGALSIAKAL 182

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF---K 524
           + + ++ TL L W  +G +G   +A  LR N ++ +LD+  N L  E  K L Q+    +
Sbjct: 183 QKNSSLETLDLSWNGLGHTGGIAIAQALRVNKSLRVLDISNNRLTTEAGKKLGQAIGKNE 242

Query: 525 VVNEALTSID-------------LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            +   L SID             +  N I  +G  A+ + +  N  + +  + ++    T
Sbjct: 243 ALETLLVSIDMMHCSLLITCNYQMGMNPIGYEGVDAMLKGVATNPSLKLIGIEVSQTAFT 302

Query: 572 KFGQSALT 579
           + G S  T
Sbjct: 303 QTGTSGQT 310



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 120/274 (43%), Gaps = 18/274 (6%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+ M     G +G   LA +L  N   EE+  + N +   G  A   +L+ N+ +  LN+
Sbjct: 22  SLKMRHHYLGGQGTKPLAVALKENTVCEEIDLSDNYVEGDGASALAKMLKENMFIVNLNI 81

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           S N +   G     ++L  N  ++ L L    L D  A  ++E L+ N  L VL+L++N 
Sbjct: 82  SNNFMRSIGAHAFAEMLEVNTTLKTLSLQGNQLSDNDALRLSEALRANMSLSVLDLSHNN 141

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
               G   L   +  N  +  + L+ N     GA ++AK L+ N SL  L L  N +G  
Sbjct: 142 FGELGGVYLGNGIAGNIGLADIDLSWNGIREKGALSIAKALQKNSSLETLDLSWNGLGHT 201

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI---------------KNCKSLL 390
           G  A+   L   K  L VLDI NN ++ +    + + I                +C  L+
Sbjct: 202 GGIAIAQALRVNK-SLRVLDISNNRLTTEAGKKLGQAIGKNEALETLLVSIDMMHCSLLI 260

Query: 391 WIN--LYMNDIGDEGAEKIADALKQNRTITTIDL 422
             N  + MN IG EG + +   +  N ++  I +
Sbjct: 261 TCNYQMGMNPIGYEGVDAMLKGVATNPSLKLIGI 294



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 18/216 (8%)

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G    AE L  N T + +S   N ++          L++N++L  L+LS N  G+ G   
Sbjct: 90  GAHAFAEMLEVNTTLKTLSLQGNQLSDNDALRLSEALRANMSLSVLDLSHNNFGELGGVY 149

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           L + +  N G+  + LS   +R++GA +IA+ L+ NS L  L+L+ N + ++G  ++A+A
Sbjct: 150 LGNGIAGNIGLADIDLSWNGIREKGALSIAKALQKNSSLETLDLSWNGLGHTGGIAIAQA 209

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL-----------------HLHGN 340
           L  N ++R L ++ N         L + +  N++L  L                  +  N
Sbjct: 210 LRVNKSLRVLDISNNRLTTEAGKKLGQAIGKNEALETLLVSIDMMHCSLLITCNYQMGMN 269

Query: 341 SIGDEGIRALMSGLSSRKG-KLAVLDIGNNSISAKG 375
            IG EG+ A++ G+++    KL  +++   + +  G
Sbjct: 270 PIGYEGVDAMLKGVATNPSLKLIGIEVSQTAFTQTG 305



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           L +R + L  +G K LA + K  N     IDL+ N +  DGA A+A+ LK  E++ + +L
Sbjct: 23  LKMRHHYLGGQGTKPLAVALKE-NTVCEEIDLSDNYVEGDGASALAKMLK--ENMFIVNL 79

Query: 564 NLANNFLTKFGQSALTD 580
           N++NNF+   G  A  +
Sbjct: 80  NISNNFMRSIGAHAFAE 96


>gi|410923541|ref|XP_003975240.1| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Takifugu rubripes]
          Length = 652

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 138/295 (46%), Gaps = 33/295 (11%)

Query: 161 LRAFSSVDM--SGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           LR   S +M    R+ G +G   LA +L  N +  +++   N +   G  A   +L+ N 
Sbjct: 106 LRQIQSSEMLLMHRSLGPQGTKALAVALVTNTSVLKLNLRDNWMEGMGGAAIAEMLKENC 165

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            +  ++LS N +GD G   + D+L  N+ +  + LS  D  DE A+ +++ L  N+ L+ 
Sbjct: 166 YITEVDLSDNNLGDRGAGAVADMLQRNSTLVEISLSGNDFTDEAAERLSQALTVNTRLQH 225

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L++N +       L   L EN+ +RS+ L  N     GA  LA GL GN  LR + L 
Sbjct: 226 LDLSHNALAERAGQILGATLSENTGLRSVSLAWNCIRGRGAVMLANGLGGNIFLRSVDLS 285

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N  G EG  AL   L   +  L  L++ NN I  +GA H+A                  
Sbjct: 286 FNGFGKEGAVALGQALRENE-VLEELNVSNNRIPPEGAIHLA------------------ 326

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLA 451
           +G          LK N+TI  + +G N I + G   I + +++N  S I +LD +
Sbjct: 327 LG----------LKHNKTIRILQIGKNPIQNAGCYGILQSMQENPDSAIEALDFS 371



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 118/230 (51%), Gaps = 2/230 (0%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E+ L   S+G +G +AL   L +    L  L++ +N +   G   +AE +K    +  ++
Sbjct: 113 EMLLMHRSLGPQGTKALAVALVTNTSVLK-LNLRDNWMEGMGGAAIAEMLKENCYITEVD 171

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N++GD GA  +AD L++N T+  I L GN+   + A  +++ L  N+ +  LDL++N
Sbjct: 172 LSDNNLGDRGAGAVADMLQRNSTLVEISLSGNDFTDEAAERLSQALTVNTRLQHLDLSHN 231

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +     + L   L  +  + ++ L W  I   GA  +A+ L  N  +  +DL  NG   
Sbjct: 232 ALAERAGQILGATLSENTGLRSVSLAWNCIRGRGAVMLANGLGGNIFLRSVDLSFNGFGK 291

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           EGA  L Q+ +  NE L  ++++ N I  +GA  +A  LK N+ + +  +
Sbjct: 292 EGAVALGQALR-ENEVLEELNVSNNRIPPEGAIHLALGLKHNKTIRILQI 340



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 127/249 (51%), Gaps = 2/249 (0%)

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G  +LA AL+ N+++  L+L  N+   +G  A+A+ L+ N  + E+ L  N++GD G  
Sbjct: 124 QGTKALAVALVTNTSVLKLNLRDNWMEGMGGAAIAEMLKENCYITEVDLSDNNLGDRGAG 183

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A+   L  R   L  + +  N  + + A  +++ +     L  ++L  N + +   + + 
Sbjct: 184 AVADMLQ-RNSTLVEISLSGNDFTDEAAERLSQALTVNTRLQHLDLSHNALAERAGQILG 242

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L +N  + ++ L  N I  +GA  +A  L  N  + S+DL++N  G +GA AL + L+
Sbjct: 243 ATLSENTGLRSVSLAWNCIRGRGAVMLANGLGGNIFLRSVDLSFNGFGKEGAVALGQALR 302

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV-VN 527
            +  +  L +   +I   GA  +A  L++N TI IL +  N +++ G   + QS +   +
Sbjct: 303 ENEVLEELNVSNNRIPPEGAIHLALGLKHNKTIRILQIGKNPIQNAGCYGILQSMQENPD 362

Query: 528 EALTSIDLA 536
            A+ ++D +
Sbjct: 363 SAIEALDFS 371



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 3/230 (1%)

Query: 345 EGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           E  R + S    R+ + + + + + S+  +G   +A  +    S+L +NL  N +   G 
Sbjct: 95  EKFRVVPSSAFLRQIQSSEMLLMHRSLGPQGTKALAVALVTNTSVLKLNLRDNWMEGMGG 154

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
             IA+ LK+N  IT +DL  NN+  +GA A+A +L+ NS +  + L+ N    + A+ LS
Sbjct: 155 AAIAEMLKENCYITEVDLSDNNLGDRGAGAVADMLQRNSTLVEISLSGNDFTDEAAERLS 214

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           + L  +  +  L L    +     + +   L  N  +  + L  N +R  GA  LA    
Sbjct: 215 QALTVNTRLQHLDLSHNALAERAGQILGATLSENTGLRSVSLAWNCIRGRGAVMLANGLG 274

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
             N  L S+DL+FN    +GA A+ QAL+ NE   +  LN++NN +   G
Sbjct: 275 -GNIFLRSVDLSFNGFGKEGAVALGQALRENE--VLEELNVSNNRIPPEG 321



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 1/218 (0%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           E  KE    + VD+S  N GD G   +A+ L  N T  E+S + N  T    +     L 
Sbjct: 159 EMLKENCYITEVDLSDNNLGDRGAGAVADMLQRNSTLVEISLSGNDFTDEAAERLSQALT 218

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
            N  L+ L+LS N + +   + L   L +N G+  + L+   +R  GA  +A  L  N  
Sbjct: 219 VNTRLQHLDLSHNALAERAGQILGATLSENTGLRSVSLAWNCIRGRGAVMLANGLGGNIF 278

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           LR ++L+ N     G  +L +AL EN  +  L+++ N     GA  LA GL+ NK++R L
Sbjct: 279 LRSVDLSFNGFGKEGAVALGQALRENEVLEELNVSNNRIPPEGAIHLALGLKHNKTIRIL 338

Query: 336 HLHGNSIGDEGIRALMSGLSSRK-GKLAVLDIGNNSIS 372
            +  N I + G   ++  +       +  LD  + ++S
Sbjct: 339 QIGKNPIQNAGCYGILQSMQENPDSAIEALDFSDITVS 376



 Score = 39.3 bits (90), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 77/193 (39%), Gaps = 13/193 (6%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q L     E     SV ++       G   LA  LG N     V  + NG    G  A  
Sbjct: 239 QILGATLSENTGLRSVSLAWNCIRGRGAVMLANGLGGNIFLRSVDLSFNGFGKEGAVALG 298

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N  L+ LN+S N I  EG   L   L  N  +  LQ+    +++ G   I + ++
Sbjct: 299 QALRENEVLEELNVSNNRIPPEGAIHLALGLKHNKTIRILQIGKNPIQNAGCYGILQSMQ 358

Query: 272 NN--SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
            N  S +  L+ ++  +    F  L  A  E     ++    N+GG +GA         +
Sbjct: 359 ENPDSAIEALDFSDITVS-QDFEDLYAATKEVFPALAV----NHGGKIGA------FTKH 407

Query: 330 KSLRELHLHGNSI 342
           K+ + L L G+ +
Sbjct: 408 KTEKRLSLSGDKV 420


>gi|440902432|gb|ELR53224.1| T-complex-associated testis-expressed protein 1 [Bos grunniens
           mutus]
          Length = 502

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 100/187 (53%), Gaps = 2/187 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L 
Sbjct: 257 FEWNLFLFTYRDCHSLAATVKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 316

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N 
Sbjct: 317 HNLIGDRGARAAAKLLS--HSRLRVLNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNC 374

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + +A AL  N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG D
Sbjct: 375 IEDEGGQALAHALHTNKCLTTLHLGGNELSEPTATLLSQVLTINTTLTSINLSCNHIGLD 434

Query: 459 GAKALSE 465
           G K L E
Sbjct: 435 GGKQLLE 441



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 2/197 (1%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            LK   L+ + + D+  + L   L+D+  +E L LS   + D GA+A A+LL ++S LRV
Sbjct: 281 TLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKLL-SHSRLRV 339

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L NN +   G  SLA AL  NS + SL+L  N     G  ALA  L  NK L  LHL 
Sbjct: 340 LNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNCIEDEGGQALAHALHTNKCLTTLHLG 399

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           GN +  E    L+S + +    L  +++  N I   G   + E + + K+LL  +L ++D
Sbjct: 400 GNELS-EPTATLLSQVLTINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 458

Query: 399 IGDEGAEKIADALKQNR 415
           I  E    I  AL  NR
Sbjct: 459 IAQESEYLIGQALCANR 475



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 2/189 (1%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A  +K C +L    L  + + D+ A  +  +L  +  +  +DL  N I  +GA A A++
Sbjct: 272 LAATVKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKL 331

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  +S +  L+LA N + A GA +L+  L  + N+ +L L    I   G + +A  L  N
Sbjct: 332 LS-HSRLRVLNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNCIEDEGGQALAHALHTN 390

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
             ++ L L  N L +  A  L+Q    +N  LTSI+L+ N I  DG   + + +  N+ +
Sbjct: 391 KCLTTLHLGGNELSEPTATLLSQVL-TINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTL 449

Query: 559 AVTSLNLAN 567
               L L++
Sbjct: 450 LEFDLRLSD 458



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 257 FEWNLFLFTYRDCHSLAATVKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 316

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +A   +L S+  L+ LNL+ N +   G   L   L  N+ +  L L    +
Sbjct: 317 HNLIGDRGARAAAKLL-SHSRLRVLNLANNQVRAPGAHSLAHALGHNSNLISLNLRLNCI 375

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L  N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 376 EDEGGQALAHALHTNKCLTTLHLGGNELSEPTATLLSQVLTINTTLTSINLSCNHIGLDG 435

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + I  E
Sbjct: 436 GKQLLEGMSDNKTLLEFDLRLSDIAQE 462



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 54/124 (43%)

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G   LA +LG+N     ++   N I   G +A    L +N  L TL+L GN + +     
Sbjct: 351 GAHSLAHALGHNSNLISLNLRLNCIEDEGGQALAHALHTNKCLTTLHLGGNELSEPTATL 410

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           L  +L  N  +  + LS   +  +G K + E + +N  L   +L  + I       + +A
Sbjct: 411 LSQVLTINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDIAQESEYLIGQA 470

Query: 298 LLEN 301
           L  N
Sbjct: 471 LCAN 474


>gi|198417716|ref|XP_002127082.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 666

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 1/203 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           AL+  L  N  + +L L GNSI D+G + ++  L  +   +  L++G+N +     ++++
Sbjct: 283 ALSAALLHNTFVEQLDLSGNSINDDGAKHVIDMLK-KNSNICRLNLGSNQLKNDSGYYIS 341

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             +    SL  I +  N + D+ A  + +ALK N T+ ++D+  N        A A +L 
Sbjct: 342 SMLCTNTSLTHICISHNTLADKEALHLCEALKLNSTLQSLDVSHNQFTDSAGQAFAAMLM 401

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
           DNS +TSL+L++N +G   A AL +  K +  + +L L W  +G  GA  +   LR+N+ 
Sbjct: 402 DNSSLTSLNLSWNMLGKIAAAALGQCFKVNSTLQSLDLSWNGLGDEGAALLGRPLRHNSN 461

Query: 501 ISILDLRANGLRDEGAKCLAQSF 523
           +  L L  N +   GA+ LA S 
Sbjct: 462 LRHLSLAVNHIGPFGAERLASSI 484



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 3/213 (1%)

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + + S+S+K    ++  + +   +  ++L  N I D+GA+ + D LK+N  I  ++LG N
Sbjct: 271 LHHRSLSSKDTLALSAALLHNTFVEQLDLSGNSINDDGAKHVIDMLKKNSNICRLNLGSN 330

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            + +     I+ +L  N+ +T + +++N +    A  L E LK +  + +L +   Q   
Sbjct: 331 QLKNDSGYYISSMLCTNTSLTHICISHNTLADKEALHLCEALKLNSTLQSLDVSHNQFTD 390

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
           S  +  A ML  N++++ L+L  N L    A  L Q FK VN  L S+DL++N + D+GA
Sbjct: 391 SAGQAFAAMLMDNSSLTSLNLSWNMLGKIAAAALGQCFK-VNSTLQSLDLSWNGLGDEGA 449

Query: 546 FAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
             + + L+ N +  +  L+LA N +  FG   L
Sbjct: 450 ALLGRPLRHNSN--LRHLSLAVNHIGPFGAERL 480



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 10/269 (3%)

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L  N  ++ L+LSGN I D+G K + D+L  N+ + RL L S  L+++    I+ 
Sbjct: 283 ALSAALLHNTFVEQLDLSGNSINDDGAKHVIDMLKKNSNICRLNLGSNQLKNDSGYYISS 342

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +L  N+ L  + +++N +       L EAL  NST++SL ++ N        A A  L  
Sbjct: 343 MLCTNTSLTHICISHNTLADKEALHLCEALKLNSTLQSLDVSHNQFTDSAGQAFAAMLMD 402

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N SL  L+L  N +G     AL          L  LD+  N +  +GA  +   +++  +
Sbjct: 403 NSSLTSLNLSWNMLGKIAAAALGQCFKV-NSTLQSLDLSWNGLGDEGAALLGRPLRHNSN 461

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRT---------ITTIDLGGNNIHSKGASAIARVL 439
           L  ++L +N IG  GAE++A ++   +          +TT+ L  N +  KG   + + L
Sbjct: 462 LRHLSLAVNHIGPFGAERLASSICGIKGKKIKKTASGLTTLVLDRNPLGRKGVMYLLKHL 521

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLK 468
           + + V T L +    +  D  + L +++K
Sbjct: 522 QQSDVFTELSIKEVVLSPDLIEMLRQMIK 550



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 14/238 (5%)

Query: 155 NEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           N F ++L      D+SG +  D+G   + + L  N     ++  +N +          +L
Sbjct: 291 NTFVEQL------DLSGNSINDDGAKHVIDMLKKNSNICRLNLGSNQLKNDSGYYISSML 344

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
            +N +L  + +S N + D+    LC+ L  N+ ++ L +S     D   +A A +L +NS
Sbjct: 345 CTNTSLTHICISHNTLADKEALHLCEALKLNSTLQSLDVSHNQFTDSAGQAFAAMLMDNS 404

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L L+ NM+      +L +    NST++SL L+ N  G  GA  L + L  N +LR 
Sbjct: 405 SLTSLNLSWNMLGKIAAAALGQCFKVNSTLQSLDLSWNGLGDEGAALLGRPLRHNSNLRH 464

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGK--------LAVLDIGNNSISAKGAFHVAEYIK 384
           L L  N IG  G   L S +   KGK        L  L +  N +  KG  ++ ++++
Sbjct: 465 LSLAVNHIGPFGAERLASSICGIKGKKIKKTASGLTTLVLDRNPLGRKGVMYLLKHLQ 522



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 9/204 (4%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           + + + +S     D+    L E+L  N T + +  + N  T +  +AF  +L  N +L +
Sbjct: 349 SLTHICISHNTLADKEALHLCEALKLNSTLQSLDVSHNQFTDSAGQAFAAMLMDNSSLTS 408

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNLS N +G      L      N+ ++ L LS   L DEGA  +   L++NS LR L L 
Sbjct: 409 LNLSWNMLGKIAAAALGQCFKVNSTLQSLDLSWNGLGDEGAALLGRPLRHNSNLRHLSLA 468

Query: 283 NNMIDYSGFTSLAEALLEN---------STIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
            N I   G   LA ++            S + +L L+ N  G  G   L K L+ +    
Sbjct: 469 VNHIGPFGAERLASSICGIKGKKIKKTASGLTTLVLDRNPLGRKGVMYLLKHLQQSDVFT 528

Query: 334 ELHLHGNSIGDEGIRALMSGLSSR 357
           EL +    +  + I  L   + SR
Sbjct: 529 ELSIKEVVLSPDLIEMLRQMIKSR 552


>gi|399498028|emb|CCG20342.1| Ran GTPase activating protein 2 [Solanum stenotomum]
          Length = 553

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEGLFLVNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N  +A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDTTAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEGLFLVNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+  ++ A AIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDTTAEAAPAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEGLFLVNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N    E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDTTAEAAPAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHNH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 140/306 (45%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    + L      E +
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEGL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLVNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN    E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDTTAEAAPAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N        +
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDTTAEAAPA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 125/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEGLFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 VNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N  T     A+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDTTAEAAPAIASCIAAKQLLAKLS 417


>gi|399497840|emb|CCG20248.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 143/319 (44%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K  +   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLFQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  +  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +D+  N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ ++ N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|403288047|ref|XP_003935228.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Saimiri boliviensis boliviensis]
          Length = 953

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 108/205 (52%), Gaps = 1/205 (0%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           +L V+ +  N I+  G   ++E +   K + ++ LY N I D GA  I   L + +++T 
Sbjct: 729 RLTVIRLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTH 788

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           + LG N I S+G   +A  +K++  I+ + +  N +G +GAKA +E L+ H ++  L L 
Sbjct: 789 LKLGKNKITSEGGKCLALAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNHPSLTILSLA 848

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
              I   G + +A  L+ N ++ IL L  N L DE A+ LA+  KV N+ L  + L  N+
Sbjct: 849 SNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKV-NQTLKHLWLIQNQ 907

Query: 540 IRDDGAFAIAQALKANEDVAVTSLN 564
           I   G   +A AL+ N  +    LN
Sbjct: 908 ITAKGTAQLADALQNNTGITEICLN 932



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 113/209 (54%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L++ L   K +  L L+ N I D G R +   L   K  L  L +G N I+++G  
Sbjct: 744 GVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKS-LTHLKLGKNKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN +S+  + ++ N +GDEGA+  A+AL+ + ++T + L  N I ++G  ++AR
Sbjct: 803 CLALAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNHPSLTILSLASNGISTEGGKSLAR 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +  L L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 863 ALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQN 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I+ + L  N ++ E AK      +++
Sbjct: 923 NTGITEICLNGNLIKPEEAKVYEDEKRII 951



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 110/200 (55%), Gaps = 4/200 (2%)

Query: 383 IKNCKS-LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           ++ C S L  I L +N I D G + +++ L + + +T + L  N I   GA  I ++L +
Sbjct: 723 LRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDE 782

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
              +T L L  N I ++G K L+  +K   +I+ + +   Q+G  GA+  A+ LR + ++
Sbjct: 783 CKSLTHLKLGKNKITSEGGKCLALAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNHPSL 842

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           +IL L +NG+  EG K LA++ +  N +L  + L  NE+ D+ A ++A+ LK N+   + 
Sbjct: 843 TILSLASNGISTEGGKSLARALQQ-NTSLEILWLTQNELNDEVAESLAEMLKVNQ--TLK 899

Query: 562 SLNLANNFLTKFGQSALTDA 581
            L L  N +T  G + L DA
Sbjct: 900 HLWLIQNQITAKGTAQLADA 919



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 4/215 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            +ELR      + + +S     D G+  L+E L   +    +    N IT  G +    +
Sbjct: 720 VQELRPCFSRLTVIRLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKI 779

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L    +L  L L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+
Sbjct: 780 LDECKSLTHLKLGKNKITSEGGKCLALAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNH 839

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L +L L +N I   G  SLA AL +N+++  L L  N      A +LA+ L+ N++L+
Sbjct: 840 PSLTILSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLK 899

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            L L  N I  +G   L   L +  G   +   GN
Sbjct: 900 HLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 95/194 (48%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++ + L   ++   +    N IT+ G K   
Sbjct: 746 KVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHLKLGKNKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN +GDEG K   + L ++  +  L L+S  +  EG K++A  L+
Sbjct: 806 LAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNHPSLTILSLASNGISTEGGKSLARALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ L +L L  N ++     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 866 QNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 ITEICLNGNLIKPE 939



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  R+ S V M G   GDEG    AE+L  + +   +S A+NGI+ 
Sbjct: 795 KITSEGGKCLALAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNHPSLTILSLASNGIST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+ L L+ N                            +L DE A+
Sbjct: 855 EGGKSLARALQQNTSLEILWLTQN----------------------------ELNDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGN 934


>gi|328875676|gb|EGG24040.1| hypothetical protein DFA_06178 [Dictyostelium fasciculatum]
          Length = 1451

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 112/523 (21%), Positives = 219/523 (41%), Gaps = 64/523 (12%)

Query: 99   VSATFVLWKLVEKLLMPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNE-- 156
            +S+ F L++       P+P + S P    +         L   +  K   +    ++E  
Sbjct: 911  ISSQFALFQ------PPRPRQKSDPLRSRLELFKSIYLTLCQNYRTKHILKFVDQIDELL 964

Query: 157  -----FAKELRAFSSVDMSGRNFGDEGLFFLAESL--GYNQTAEE------------VSF 197
                 F ++L  +S++D+S  +     + F+ ++L   +N   EE            +  
Sbjct: 965  DKEGSFRQKL-LYSTIDLSSSSIRANDISFIGDALRDAFNTPIEEGETIVENLAITSIDL 1023

Query: 198  AANGITAAGI-KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
            + N +    + +    +L+++  +  +NL    +  +G+  +  IL     ++ L +   
Sbjct: 1024 SNNPLMGGDLAEPLKIILETSPNIVHINLKNIGLAGKGIGNVVSILEKKKNIQTLHIGKN 1083

Query: 257  DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
             L D G K+I + LK ++I   L L    I   G   + + L +N T+ SL+++ N    
Sbjct: 1084 RLADIGVKSILKSLKQSTI-STLGLEETAIFDEGCIIIQKLLQKNRTLTSLNISKNKITE 1142

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
             G   + +GL  N+ L EL+L GN IG + I   +  +S+   +L  L I + S+++   
Sbjct: 1143 NGFKVMFEGLRNNQVLSELYLSGNPIGHKYINRFLQWISTNNNQLTKLAIASTSLNSNSG 1202

Query: 377  FHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN---------- 425
              + + +  N   L  +++ +N +G +G++ + + +  N TI  + L GN          
Sbjct: 1203 AEILKILTGNTCRLSVLDVSLNHLGPDGSKHVINGIANNNTILDVSLSGNKISTLGCNEL 1262

Query: 426  --------------------NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
                                N++SK    I ++L+ N  IT LDL+ N       +ALS+
Sbjct: 1263 CNSLELSASCIITKLSLRFCNLNSKSIYRICKMLETNKTITQLDLSLNKFSKSSCQALSQ 1322

Query: 466  VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
             L  +  +    +  C+IG      +   L+ N++I  L L  N + ++G + L      
Sbjct: 1323 SLPSNTTLEEFFITNCEIGHKEFAAILPGLQMNSSIKKLYLDFNPIGNKGIRLLCDVIN- 1381

Query: 526  VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
             N ++  I +   EI         + L  N ++ +  LNL  N
Sbjct: 1382 NNNSMEVITIRNAEIHAKEVLEFLKGL--NTNITLHKLNLTEN 1422



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 133/313 (42%), Gaps = 35/313 (11%)

Query: 176  DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKA-FDGVLQSNIALKTLNLSGNPIGDEG 234
            DEG   + + L  N+T   ++ + N IT  G K  F+G L++N  L  L LSGNPIG + 
Sbjct: 1114 DEGCIIIQKLLQKNRTLTSLNISKNKITENGFKVMFEG-LRNNQVLSELYLSGNPIGHKY 1172

Query: 235  V-KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFT 292
            + + L  I  +N  + +L ++S  L       I ++L  N+  L VL+++ N +   G  
Sbjct: 1173 INRFLQWISTNNNQLTKLAIASTSLNSNSGAEILKILTGNTCRLSVLDVSLNHLGPDGSK 1232

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALA----------------------------- 323
             +   +  N+TI  + L+GN    LG N L                              
Sbjct: 1233 HVINGIANNNTILDVSLSGNKISTLGCNELCNSLELSASCIITKLSLRFCNLNSKSIYRI 1292

Query: 324  -KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
             K LE NK++ +L L  N       +AL   L S    L    I N  I  K    +   
Sbjct: 1293 CKMLETNKTITQLDLSLNKFSKSSCQALSQSLPS-NTTLEEFFITNCEIGHKEFAAILPG 1351

Query: 383  IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
            ++   S+  + L  N IG++G   + D +  N ++  I +    IH+K      + L  N
Sbjct: 1352 LQMNSSIKKLYLDFNPIGNKGIRLLCDVINNNNSMEVITIRNAEIHAKEVLEFLKGLNTN 1411

Query: 443  SVITSLDLAYNPI 455
              +  L+L  NPI
Sbjct: 1412 ITLHKLNLTENPI 1424



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 19/180 (10%)

Query: 410  ALKQNRTITTIDLGGNNIHSKGASAIARVLKD--------------NSVITSLDLAYNPI 455
            + +Q    +TIDL  ++I +   S I   L+D              N  ITS+DL+ NP+
Sbjct: 969  SFRQKLLYSTIDLSSSSIRANDISFIGDALRDAFNTPIEEGETIVENLAITSIDLSNNPL 1028

Query: 456  -GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
             G D A+ L  +L+   NI  + L    +   G   V  +L     I  L +  N L D 
Sbjct: 1029 MGGDLAEPLKIILETSPNIVHINLKNIGLAGKGIGNVVSILEKKKNIQTLHIGKNRLADI 1088

Query: 515  GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            G K + +S K     ++++ L    I D+G   I + L+ N    +TSLN++ N +T+ G
Sbjct: 1089 GVKSILKSLK--QSTISTLGLEETAIFDEGCIIIQKLLQKNR--TLTSLNISKNKITENG 1144



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 12/131 (9%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL---QSNI 218
            +  + +D+S   F       L++SL  N T EE  F  N     G K F  +L   Q N 
Sbjct: 1300 KTITQLDLSLNKFSKSSCQALSQSLPSNTTLEEF-FITN--CEIGHKEFAAILPGLQMNS 1356

Query: 219  ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK---NNSI 275
            ++K L L  NPIG++G++ LCD++ +N  +E + + + ++    AK + E LK    N  
Sbjct: 1357 SIKKLYLDFNPIGNKGIRLLCDVINNNNSMEVITIRNAEIH---AKEVLEFLKGLNTNIT 1413

Query: 276  LRVLELNNNMI 286
            L  L L  N I
Sbjct: 1414 LHKLNLTENPI 1424


>gi|320165354|gb|EFW42253.1| hypothetical protein CAOG_07638 [Capsaspora owczarzaki ATCC 30864]
          Length = 381

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 1/148 (0%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L+EL L+ N IGD G++A+   L      L  LD+  N +   GA  +AE +K  K+
Sbjct: 50  NTTLKELDLYQNQIGDAGLQAVAEALKVNT-TLTSLDLEENRLGDAGAHAIAEALKVNKT 108

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           L W+NL  N IGD GA+ IA+ALK N T++++ LG N I   GA AIA  L  N  +  L
Sbjct: 109 LDWLNLNKNQIGDAGAQAIAEALKVNTTLSSLHLGDNQIGDIGAQAIAGALMVNKQLWWL 168

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTL 476
           D+ +N IG  G +A+ E  + +  +N L
Sbjct: 169 DIRFNFIGKAGLQAIGEARQVNRTLNRL 196



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 100/180 (55%), Gaps = 1/180 (0%)

Query: 405 EKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
           ++I DA K N T+  +DL  N I   G  A+A  LK N+ +TSLDL  N +G  GA A++
Sbjct: 41  KQIDDAFKVNTTLKELDLYQNQIGDAGLQAVAEALKVNTTLTSLDLEENRLGDAGAHAIA 100

Query: 465 EVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           E LK +  ++ L L   QIG +GA+ +A+ L+ N T+S L L  N + D GA+ +A +  
Sbjct: 101 EALKVNKTLDWLNLNKNQIGDAGAQAIAEALKVNTTLSSLHLGDNQIGDIGAQAIAGAL- 159

Query: 525 VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           +VN+ L  +D+ FN I   G  AI +A + N  +    ++   N L    +  L  A+DL
Sbjct: 160 MVNKQLWWLDIRFNFIGKAGLQAIGEARQVNRTLNRLLIDTQINPLVFSSRPRLATAEDL 219



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 78/143 (54%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           K  D   + N  LK L+L  N IGD G++ + + L  N  +  L L    L D GA AIA
Sbjct: 41  KQIDDAFKVNTTLKELDLYQNQIGDAGLQAVAEALKVNTTLTSLDLEENRLGDAGAHAIA 100

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E LK N  L  L LN N I  +G  ++AEAL  N+T+ SLHL  N  G +GA A+A  L 
Sbjct: 101 EALKVNKTLDWLNLNKNQIGDAGAQAIAEALKVNTTLSSLHLGDNQIGDIGAQAIAGALM 160

Query: 328 GNKSLRELHLHGNSIGDEGIRAL 350
            NK L  L +  N IG  G++A+
Sbjct: 161 VNKQLWWLDIRFNFIGKAGLQAI 183



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 81/134 (60%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++LY N IGD G + +A+ALK N T+T++DL  N +   GA AIA  LK N  +  L+L 
Sbjct: 56  LDLYQNQIGDAGLQAVAEALKVNTTLTSLDLEENRLGDAGAHAIAEALKVNKTLDWLNLN 115

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N IG  GA+A++E LK +  +++L LG  QIG  GA+ +A  L  N  +  LD+R N +
Sbjct: 116 KNQIGDAGAQAIAEALKVNTTLSSLHLGDNQIGDIGAQAIAGALMVNKQLWWLDIRFNFI 175

Query: 512 RDEGAKCLAQSFKV 525
              G + + ++ +V
Sbjct: 176 GKAGLQAIGEARQV 189



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 79/152 (51%)

Query: 184 ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV 243
           ++   N T +E+    N I  AG++A    L+ N  L +L+L  N +GD G   + + L 
Sbjct: 45  DAFKVNTTLKELDLYQNQIGDAGLQAVAEALKVNTTLTSLDLEENRLGDAGAHAIAEALK 104

Query: 244 DNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
            N  ++ L L+   + D GA+AIAE LK N+ L  L L +N I   G  ++A AL+ N  
Sbjct: 105 VNKTLDWLNLNKNQIGDAGAQAIAEALKVNTTLSSLHLGDNQIGDIGAQAIAGALMVNKQ 164

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           +  L +  N+ G  G  A+ +  + N++L  L
Sbjct: 165 LWWLDIRFNFIGKAGLQAIGEARQVNRTLNRL 196



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 2/166 (1%)

Query: 147 FRES--KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           +R+S  K+ +++  K       +D+     GD GL  +AE+L  N T   +    N +  
Sbjct: 34  WRDSLRKKQIDDAFKVNTTLKELDLYQNQIGDAGLQAVAEALKVNTTLTSLDLEENRLGD 93

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG  A    L+ N  L  LNL+ N IGD G + + + L  N  +  L L    + D GA+
Sbjct: 94  AGAHAIAEALKVNKTLDWLNLNKNQIGDAGAQAIAEALKVNTTLSSLHLGDNQIGDIGAQ 153

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           AIA  L  N  L  L++  N I  +G  ++ EA   N T+  L ++
Sbjct: 154 AIAGALMVNKQLWWLDIRFNFIGKAGLQAIGEARQVNRTLNRLLID 199



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 12/153 (7%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + E  K     +S+D+     GD G   +AE+L  N+T + ++   N I  AG +A  
Sbjct: 69  QAVAEALKVNTTLTSLDLEENRLGDAGAHAIAEALKVNKTLDWLNLNKNQIGDAGAQAIA 128

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAI 266
             L+ N  L +L+L  N IGD G + +   L+ N      QL  +D+R       G +AI
Sbjct: 129 EALKVNTTLSSLHLGDNQIGDIGAQAIAGALMVNK-----QLWWLDIRFNFIGKAGLQAI 183

Query: 267 AELLKNNSILRVLELNN--NMIDYSGFTSLAEA 297
            E  + N  L  L ++   N + +S    LA A
Sbjct: 184 GEARQVNRTLNRLLIDTQINPLVFSSRPRLATA 216


>gi|297698721|ref|XP_002826462.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 2-like, partial [Pongo abelii]
          Length = 860

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 122/238 (51%), Gaps = 5/238 (2%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +G   + 
Sbjct: 601 ALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDRGICKLI 656

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  +A  L+
Sbjct: 657 ECALHCEQLQKLALFNNKLTDGCAHSMAKLLASRQNFLALRLGNNHITAVGAQVLAEGLR 716

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A ML  N  
Sbjct: 717 GNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVM 776

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           +  L L  N L+DEG   LA+  K  N +L  + L+ N I   GA A+ QAL+ N+ +
Sbjct: 777 LEELCLEENHLQDEGVCSLAEGLK-KNSSLKILKLSNNCITYLGAEALLQALERNDTI 833



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 135/262 (51%), Gaps = 4/262 (1%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 584 VGHLKLTFCSVGPAECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 640

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +L  N     G   L +     + L++L L  N + D    ++   L+SR+  LA L +G
Sbjct: 641 YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLASRQNFLA-LRLG 699

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 700 NNHITAVGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 759

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    I   G
Sbjct: 760 GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 819

Query: 488 AEFVADMLRYNNTISILDLRAN 509
           AE +   L  N+TI  + LR N
Sbjct: 820 AEALLQALERNDTILEVWLRGN 841



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL +      L 
Sbjct: 638 KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLASRQNFLALR 697

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L NN I   G   LAE L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 698 LGNNHITAVGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 757

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           +IG  G +AL   L ++   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 758 NIGSVGAQALALML-AKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCIT 816

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNI 427
             GAE +  AL++N TI  + L GN  
Sbjct: 817 YLGAEALLQALERNDTILEVWLRGNTF 843



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 88/169 (52%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +A+ L   Q    +    N ITA G +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 683 MAKLLASRQNFLALRLGNNHITAVGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEA 742

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L +N
Sbjct: 743 LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 802

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +  L
Sbjct: 803 SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 851



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 88/174 (50%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL      ++ +     + F ++ +   +    G   LAE L  N + + + F 
Sbjct: 668 LALFNNKLTDGCAHSMAKLLASRQNFLALRLGNNHITAVGAQVLAEGLRGNTSLQFLGFW 727

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A    L  + +L+ L+L GN IG  G + L  +L  N  +E L L    L
Sbjct: 728 GNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHL 787

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +DEG  ++AE LK NS L++L+L+NN I Y G  +L +AL  N TI  + L GN
Sbjct: 788 QDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGN 841



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 88/197 (44%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G+  L E   + +  ++++   N +T     +   +L S      L L  N I  
Sbjct: 646 NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLASRQNFLALRLGNNHITA 705

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L + L  N  ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 706 VGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 765

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N I   G  AL+ 
Sbjct: 766 ALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQ 825

Query: 353 GLSSRKGKLAVLDIGNN 369
            L      L V   GN 
Sbjct: 826 ALERNDTILEVWLRGNT 842


>gi|426227751|ref|XP_004007979.1| PREDICTED: LOW QUALITY PROTEIN: nucleotide-binding oligomerization
           domain-containing protein 1 [Ovis aries]
          Length = 945

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   + E +   K L ++ LY N I D GA 
Sbjct: 711 GVRELQPCFS----RLTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGAG 766

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA  L + + +T + LG N I S+G  ++A  +K++  I  + +  N IG +GAKA +E
Sbjct: 767 YIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAE 826

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I   G + +A  L+ N ++ I  L  N L DE A+  A+  K 
Sbjct: 827 ALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLK- 885

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           VN+ L  + L  N+I   G   +A+AL+ N  +    LN
Sbjct: 886 VNQTLKHLWLIQNQITAKGIAQLAEALQKNTGIMEICLN 924



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 2/211 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L  N I D G++ L   L+  K  L  L + NN I+  GA ++A  +  CK L  + L
Sbjct: 725 IRLSVNQITDSGVKVLYEELTKYK-ILTFLGLYNNQITDVGAGYIARILDECKGLTHLKL 783

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+K +++I  + + GN I  +GA A A  L+++  +T+L LA+N 
Sbjct: 784 GKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNG 843

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           I  +G K+L+  L+ + ++    L   ++    AE  A+ML+ N T+  L L  N +  +
Sbjct: 844 ISTEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAK 903

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
           G   LA++ +  N  +  I L  N I+ + A
Sbjct: 904 GIAQLAEALQ-KNTGIMEICLNGNLIKPEEA 933



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K L  L L+ N I D G   +   L   KG L  L +G N I+++G  
Sbjct: 736 GVKVLYEELTKYKILTFLGLYNNQITDVGAGYIARILDECKG-LTHLKLGKNKITSEGGK 794

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++A 
Sbjct: 795 SLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAW 854

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++ +E+LK +  +  L L   QI A G   +A+ L+ 
Sbjct: 855 ALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQK 914

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I  + L  N ++ E AK      ++V
Sbjct: 915 NTGIMEICLNGNLIKPEEAKVFEDEKRIV 943



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  ++A  L   +    +    N IT+ G K+    ++++ ++  + + GN IGDEG 
Sbjct: 762 DVGAGYIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGA 821

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K   + L ++  +  L L+   +  EG K++A  L+ N+ LR+  L  N +D     S A
Sbjct: 822 KAFAEALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFA 881

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           E L  N T++ L L  N   A G   LA+ L+ N  + E+ L+GN I  E
Sbjct: 882 EMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKNTGIMEICLNGNLIKPE 931



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 89/202 (44%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G      +L     L  L L 
Sbjct: 725 IRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGAGYIARILDECKGLTHLKLG 784

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG K L   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 785 KNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGI 844

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA AL +N+++R   L  N      A + A+ L+ N++L+ L L  N I  +G
Sbjct: 845 STEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKG 904

Query: 347 IRALMSGLSSRKGKLAVLDIGN 368
           I  L   L    G + +   GN
Sbjct: 905 IAQLAEALQKNTGIMEICLNGN 926



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  ++L    K  ++   V M G   GDEG    AE+L  + +   +S A NGI+ 
Sbjct: 787 KITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGIST 846

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+   L+ N                            +L DE A+
Sbjct: 847 EGGKSLAWALQQNASLRIFWLTKN----------------------------ELDDEVAE 878

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           + AE+LK N  L+ L L  N I   G   LAEAL +N+ I  + LNGN
Sbjct: 879 SFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKNTGIMEICLNGN 926


>gi|403340520|gb|EJY69546.1| Leucine Rich Repeat family protein [Oxytricha trifallax]
          Length = 1290

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 160/318 (50%), Gaps = 13/318 (4%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           LRD+G K +A+ L +N+ +  L+L+ N I + G T L + L +N++I SL + G+Y G  
Sbjct: 607 LRDDGVKILAKYLVSNTSIMHLDLSQNEITHKGATDLFQCLSQNNSIVSLDI-GSYDGQS 665

Query: 318 GANALAKGLEG--------NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
                 KGL+         N  L  L+L GN IG++G++ L SGL + + ++  LD+ NN
Sbjct: 666 RNRIGPKGLQKLHSILIMPNTMLSFLYLAGNYIGNQGVQILASGLENNE-RIIALDLSNN 724

Query: 370 SIS-AKGAFHVAEYIKNCKS-LLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNN 426
            IS  +GA  + + ++N  + ++ + L  N +G+ G E+ + +LKQ+   +  ++L    
Sbjct: 725 EISGTQGADGLCQILQNKNNQIIKLILSKNPLGNNGIERFSWSLKQDHCKVKFLNLSKCE 784

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
               GA  +   ++    I +L L  N +       L ++L  + ++  L +  C +   
Sbjct: 785 FTQVGARFLYLGVRVCHSIQTLILDKNRLDGASVTVLQQMLWVNSSLQNLSMASCNLKDE 844

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
           G + + D L  N +I  L L+ N + D+    LA+ F +   A+  +DL++N I      
Sbjct: 845 GMKSLCDGLERNTSIRSLILQNNQITDKSIINLAKLFGICKLAIKLLDLSYNYITHKSGI 904

Query: 547 AIAQALKANEDVAVTSLN 564
            + + L  NE +    +N
Sbjct: 905 QLFENLANNETIQTLIIN 922



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 7/282 (2%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ----SNIALKTLN 224
           ++G   G++G+  LA  L  N+    +  + N I  +G +  DG+ Q     N  +  L 
Sbjct: 693 LAGNYIGNQGVQILASGLENNERIIALDLSNNEI--SGTQGADGLCQILQNKNNQIIKLI 750

Query: 225 LSGNPIGDEGVKCLC-DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           LS NP+G+ G++     +  D+  V+ L LS  +    GA+ +   ++    ++ L L+ 
Sbjct: 751 LSKNPLGNNGIERFSWSLKQDHCKVKFLNLSKCEFTQVGARFLYLGVRVCHSIQTLILDK 810

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +D +  T L + L  NS++++L +        G  +L  GLE N S+R L L  N I 
Sbjct: 811 NRLDGASVTVLQQMLWVNSSLQNLSMASCNLKDEGMKSLCDGLERNTSIRSLILQNNQIT 870

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           D+ I  L       K  + +LD+  N I+ K    + E + N +++  + +  N +GDE 
Sbjct: 871 DKSIINLAKLFGICKLAIKLLDLSYNYITHKSGIQLFENLANNETIQTLIINNNSLGDEA 930

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
           A+++   LK+NR I  I+L  N ++ +    I   +  N ++
Sbjct: 931 AQELIQTLKKNRFIRKINLQHNGMNLRFVDEIQEFVSKNEML 972



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 151/359 (42%), Gaps = 39/359 (10%)

Query: 191 TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVER 250
           T E+     N +   G+K     L SN ++  L+LS N I  +G   L   L  N  +  
Sbjct: 597 TGEQTQLI-NKLRDDGVKILAKYLVSNTSIMHLDLSQNEITHKGATDLFQCLSQNNSIVS 655

Query: 251 LQLSSVDLRDE---GAKAIAEL----LKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           L + S D +     G K + +L    +  N++L  L L  N I   G   LA  L  N  
Sbjct: 656 LDIGSYDGQSRNRIGPKGLQKLHSILIMPNTMLSFLYLAGNYIGNQGVQILASGLENNER 715

Query: 304 IRSLHLNGN-YGGALGANALAKGLEG-NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           I +L L+ N   G  GA+ L + L+  N  + +L L  N +G+ GI      L     K+
Sbjct: 716 IIALDLSNNEISGTQGADGLCQILQNKNNQIIKLILSKNPLGNNGIERFSWSLKQDHCKV 775

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKS---------------------LLWINLYMNDIG 400
             L++     +  GA  +   ++ C S                     +LW+N  + ++ 
Sbjct: 776 KFLNLSKCEFTQVGARFLYLGVRVCHSIQTLILDKNRLDGASVTVLQQMLWVNSSLQNLS 835

Query: 401 -------DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSV-ITSLDLAY 452
                  DEG + + D L++N +I ++ L  N I  K    +A++     + I  LDL+Y
Sbjct: 836 MASCNLKDEGMKSLCDGLERNTSIRSLILQNNQITDKSIINLAKLFGICKLAIKLLDLSY 895

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           N I       L E L  +  I TL +    +G   A+ +   L+ N  I  ++L+ NG+
Sbjct: 896 NYITHKSGIQLFENLANNETIQTLIINNNSLGDEAAQELIQTLKKNRFIRKINLQHNGM 954



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 1/178 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++S   F   G  FL   +    + + +    N +  A +     +L  N +L+ L+++
Sbjct: 778 LNLSKCEFTQVGARFLYLGVRVCHSIQTLILDKNRLDGASVTVLQQMLWVNSSLQNLSMA 837

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNM 285
              + DEG+K LCD L  N  +  L L +  + D+    +A+L     + +++L+L+ N 
Sbjct: 838 SCNLKDEGMKSLCDGLERNTSIRSLILQNNQITDKSIINLAKLFGICKLAIKLLDLSYNY 897

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           I +     L E L  N TI++L +N N  G   A  L + L+ N+ +R+++L  N + 
Sbjct: 898 ITHKSGIQLFENLANNETIQTLIINNNSLGDEAAQELIQTLKKNRFIRKINLQHNGMN 955



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 9/187 (4%)

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL----- 450
           +N + D+G + +A  L  N +I  +DL  N I  KGA+ + + L  N+ I SLD+     
Sbjct: 604 INKLRDDGVKILAKYLVSNTSIMHLDLSQNEITHKGATDLFQCLSQNNSIVSLDIGSYDG 663

Query: 451 -AYNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
            + N IG  G + L  +L      ++ L L    IG  G + +A  L  N  I  LDL  
Sbjct: 664 QSRNRIGPKGLQKLHSILIMPNTMLSFLYLAGNYIGNQGVQILASGLENNERIIALDLSN 723

Query: 509 NGLR-DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           N +   +GA  L Q  +  N  +  + L+ N + ++G    + +LK +    V  LNL+ 
Sbjct: 724 NEISGTQGADGLCQILQNKNNQIIKLILSKNPLGNNGIERFSWSLKQDH-CKVKFLNLSK 782

Query: 568 NFLTKFG 574
              T+ G
Sbjct: 783 CEFTQVG 789



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 69/269 (25%)

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG----- 423
           N +   G   +A+Y+ +  S++ ++L  N+I  +GA  +   L QN +I ++D+G     
Sbjct: 605 NKLRDDGVKILAKYLVSNTSIMHLDLSQNEITHKGATDLFQCLSQNNSIVSLDIGSYDGQ 664

Query: 424 ------------------------------GNNIHSKGASAIARVLKDNSVITSLDLAYN 453
                                         GN I ++G   +A  L++N  I +LDL+ N
Sbjct: 665 SRNRIGPKGLQKLHSILIMPNTMLSFLYLAGNYIGNQGVQILASGLENNERIIALDLSNN 724

Query: 454 PI-GADGAKALSEVL-----------------------KF-------HGNINTLKLGWCQ 482
            I G  GA  L ++L                       +F       H  +  L L  C+
Sbjct: 725 EISGTQGADGLCQILQNKNNQIIKLILSKNPLGNNGIERFSWSLKQDHCKVKFLNLSKCE 784

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
               GA F+   +R  ++I  L L  N L D  +  + Q    VN +L ++ +A   ++D
Sbjct: 785 FTQVGARFLYLGVRVCHSIQTLILDKNRL-DGASVTVLQQMLWVNSSLQNLSMASCNLKD 843

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +G  ++   L+ N   ++ SL L NN +T
Sbjct: 844 EGMKSLCDGLERN--TSIRSLILQNNQIT 870


>gi|326433997|gb|EGD79567.1| hypothetical protein PTSG_13043 [Salpingoeca sp. ATCC 50818]
          Length = 1170

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 118/217 (54%), Gaps = 2/217 (0%)

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+  DL DE    I   + NN+   V+ L    +   G  ++AEAL  N+ ++ L L G+
Sbjct: 16  LAQSDLEDEANDTI-RTIANNTCGDVVSLGFEGLGVDGARAVAEALRHNTCLKILDLIGS 74

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                GA ALAK L+ + +L+EL L  N+I ++G RAL   L      L  LD+ +NSIS
Sbjct: 75  AIAEKGAVALAKILKHDATLKELILRKNAICNDGARALALMLK-HNSTLTSLDLSHNSIS 133

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
             GA  + + +++  SL  ++L  N I D GAE +A+ LK N  I  +DL  N+I   G 
Sbjct: 134 DHGAEELGQMLQHNTSLKELDLNNNRISDVGAEVLAEMLKHNTAIRNLDLRKNSIGFNGV 193

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           +A+  +LK N  IT+L+L+ + +       + E+L++
Sbjct: 194 AALVVMLKHNMTITNLNLSEHCLTEREVLGVLELLQY 230



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%)

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           ++  N   + VS    G+   G +A    L+ N  LK L+L G+ I ++G   L  IL  
Sbjct: 31  TIANNTCGDVVSLGFEGLGVDGARAVAEALRHNTCLKILDLIGSAIAEKGAVALAKILKH 90

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           +A ++ L L    + ++GA+A+A +LK+NS L  L+L++N I   G   L + L  N+++
Sbjct: 91  DATLKELILRKNAICNDGARALALMLKHNSTLTSLDLSHNSISDHGAEELGQMLQHNTSL 150

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           + L LN N    +GA  LA+ L+ N ++R L L  NSIG  G+ AL+  L      +  L
Sbjct: 151 KELDLNNNRISDVGAEVLAEMLKHNTAIRNLDLRKNSIGFNGVAALVVMLKHNM-TITNL 209

Query: 365 DIGNNSISAK---GAFHVAEY------IKNCKSLL 390
           ++  + ++ +   G   + +Y      I+ CK +L
Sbjct: 210 NLSEHCLTEREVLGVLELLQYVHTKAKIRLCKPVL 244



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 106/191 (55%), Gaps = 1/191 (0%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           V+ +G   +   GA  VAE +++   L  ++L  + I ++GA  +A  LK + T+  + L
Sbjct: 40  VVSLGFEGLGVDGARAVAEALRHNTCLKILDLIGSAIAEKGAVALAKILKHDATLKELIL 99

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I + GA A+A +LK NS +TSLDL++N I   GA+ L ++L+ + ++  L L   +
Sbjct: 100 RKNAICNDGARALALMLKHNSTLTSLDLSHNSISDHGAEELGQMLQHNTSLKELDLNNNR 159

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           I   GAE +A+ML++N  I  LDLR N +   G   L    K  N  +T+++L+ + + +
Sbjct: 160 ISDVGAEVLAEMLKHNTAIRNLDLRKNSIGFNGVAALVVMLK-HNMTITNLNLSEHCLTE 218

Query: 543 DGAFAIAQALK 553
                + + L+
Sbjct: 219 REVLGVLELLQ 229



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 118/223 (52%), Gaps = 23/223 (10%)

Query: 294 LAEALLE---NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           LA++ LE   N TIR++  N   G     + ++ G EG             +G +G RA+
Sbjct: 16  LAQSDLEDEANDTIRTI-ANNTCG-----DVVSLGFEG-------------LGVDGARAV 56

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              L      L +LD+  ++I+ KGA  +A+ +K+  +L  + L  N I ++GA  +A  
Sbjct: 57  AEALRHNTC-LKILDLIGSAIAEKGAVALAKILKHDATLKELILRKNAICNDGARALALM 115

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           LK N T+T++DL  N+I   GA  + ++L+ N+ +  LDL  N I   GA+ L+E+LK +
Sbjct: 116 LKHNSTLTSLDLSHNSISDHGAEELGQMLQHNTSLKELDLNNNRISDVGAEVLAEMLKHN 175

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
             I  L L    IG +G   +  ML++N TI+ L+L  + L +
Sbjct: 176 TAIRNLDLRKNSIGFNGVAALVVMLKHNMTITNLNLSEHCLTE 218



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 31/187 (16%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L    +G +GA  +A+AL+ N  +  +DL G+ I  KGA A+A++LK ++ +  L L 
Sbjct: 41  VSLGFEGLGVDGARAVAEALRHNTCLKILDLIGSAIAEKGAVALAKILKHDATLKELILR 100

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I  DGA+AL                            A ML++N+T++ LDL  N +
Sbjct: 101 KNAICNDGARAL----------------------------ALMLKHNSTLTSLDLSHNSI 132

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            D GA+ L Q  +  N +L  +DL  N I D GA  +A+ LK N   A+ +L+L  N + 
Sbjct: 133 SDHGAEELGQMLQ-HNTSLKELDLNNNRISDVGAEVLAEMLKHN--TAIRNLDLRKNSIG 189

Query: 572 KFGQSAL 578
             G +AL
Sbjct: 190 FNGVAAL 196



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 95/188 (50%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           V +     G +G   +AE+L +N   + +    + I   G  A   +L+ +  LK L L 
Sbjct: 41  VSLGFEGLGVDGARAVAEALRHNTCLKILDLIGSAIAEKGAVALAKILKHDATLKELILR 100

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I ++G + L  +L  N+ +  L LS   + D GA+ + ++L++N+ L+ L+LNNN I
Sbjct: 101 KNAICNDGARALALMLKHNSTLTSLDLSHNSISDHGAEELGQMLQHNTSLKELDLNNNRI 160

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   LAE L  N+ IR+L L  N  G  G  AL   L+ N ++  L+L  + + +  
Sbjct: 161 SDVGAEVLAEMLKHNTAIRNLDLRKNSIGFNGVAALVVMLKHNMTITNLNLSEHCLTERE 220

Query: 347 IRALMSGL 354
           +  ++  L
Sbjct: 221 VLGVLELL 228



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            +S+D+S  +  D G   L + L +N + +E+    N I+  G +    +L+ N A++ L
Sbjct: 122 LTSLDLSHNSISDHGAEELGQMLQHNTSLKELDLNNNRISDVGAEVLAEMLKHNTAIRNL 181

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
           +L  N IG  GV  L  +L  N  +  L LS   L +     + ELL+
Sbjct: 182 DLRKNSIGFNGVAALVVMLKHNMTITNLNLSEHCLTEREVLGVLELLQ 229


>gi|32966211|gb|AAP92142.1| leucine-rich repeat protein N3C [synthetic construct]
          Length = 244

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 5/179 (2%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERL 251
           E++    N +T AG+K    VL+SN +L+ L+LS N +GD GV+ L   L+D    +E L
Sbjct: 42  EQLKLNKNDLTEAGLKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLESL 101

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-IRSLHLN 310
           +L S DL + G K +A +L++N  LR L L+ N +  +G   L + LL+  T +  L LN
Sbjct: 102 KLQSTDLTEAGLKDLASVLRSNPSLRELNLSTNKLGDAGVRLLLQGLLDPGTRLEKLDLN 161

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL---SSRKGKLAVLDI 366
                  G   LA  L  N SLREL L  N +GD G+R L+ GL    +R  +L + DI
Sbjct: 162 DTDLTEAGVKDLASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEQLVLYDI 220



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 1/160 (0%)

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST-I 304
           A +E+L+L+  DL + G K +A +L++N  LR L L+NN +  +G   L + LL+  T +
Sbjct: 39  ARLEQLKLNKNDLTEAGLKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRL 98

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            SL L        G   LA  L  N SLREL+L  N +GD G+R L+ GL     +L  L
Sbjct: 99  ESLKLQSTDLTEAGLKDLASVLRSNPSLRELNLSTNKLGDAGVRLLLQGLLDPGTRLEKL 158

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGA 404
           D+ +  ++  G   +A  +++  SL  ++L  N +GD G 
Sbjct: 159 DLNDTDLTEAGVKDLASVLRSNPSLRELSLSTNKLGDAGV 198



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 77/188 (40%), Gaps = 27/188 (14%)

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           +  L LN N     G   LA  L  N SLREL L  N +GD G+R L+ GL     +L  
Sbjct: 41  LEQLKLNKNDLTEAGLKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLES 100

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L + +  ++  G   +A  +++  SL  +NL  N +GD G   +   L            
Sbjct: 101 LKLQSTDLTEAGLKDLASVLRSNPSLRELNLSTNKLGDAGVRLLLQGL------------ 148

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
                          L   + +  LDL    +   G K L+ VL+ + ++  L L   ++
Sbjct: 149 ---------------LDPGTRLEKLDLNDTDLTEAGVKDLASVLRSNPSLRELSLSTNKL 193

Query: 484 GASGAEFV 491
           G +G   +
Sbjct: 194 GDAGVRLL 201



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 3/159 (1%)

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN-INT 475
           +  + L  N++   G   +A VL+ N  +  L L+ N +G  G + L + L   G  + +
Sbjct: 41  LEQLKLNKNDLTEAGLKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLES 100

Query: 476 LKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
           LKL    +  +G + +A +LR N ++  L+L  N L D G + L Q        L  +DL
Sbjct: 101 LKLQSTDLTEAGLKDLASVLRSNPSLRELNLSTNKLGDAGVRLLLQGLLDPGTRLEKLDL 160

Query: 536 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
              ++ + G   +A  L++N   ++  L+L+ N L   G
Sbjct: 161 NDTDLTEAGVKDLASVLRSNP--SLRELSLSTNKLGDAG 197


>gi|399498082|emb|CCG20369.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 146/316 (46%), Gaps = 30/316 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSID 534
           L + FK   E L S++
Sbjct: 487 LKEIFKKSPEMLASLE 502



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E +  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEASSAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K  +   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLFQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  +  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|332227825|ref|XP_003263091.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Nomascus leucogenys]
          Length = 1040

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 123/244 (50%), Gaps = 5/244 (2%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 775  GPAECAALAFVLQHLRRPVALQLDHNSVGDTGVEQLLPCL----GVCKALYLRDNNISDR 830

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 831  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGAQV 890

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 891  LAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 950

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            L  N  +  L L  N ++DEG   LA+  K  N +L  + L+ N I   GA A+ QAL+ 
Sbjct: 951  LAKNVMLEELCLEENHIQDEGVCSLAEGLK-KNSSLKILKLSNNCITYLGAKALLQALER 1009

Query: 555  NEDV 558
            N+ +
Sbjct: 1010 NDTI 1013



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 136/262 (51%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L++N +  +G   L   L      ++L
Sbjct: 764  VGHLKLTFCSVGPAECAALAFVLQHLRRPVALQLDHNSVGDTGVEQLLPCL---GVCKAL 820

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 821  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 879

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 880  NNHITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 939

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N I  +G  +L+E LK + ++  LKL    I   G
Sbjct: 940  GSVGAQALALMLAKNVMLEELCLEENHIQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 999

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            A+ +   L  N+TI  + LR N
Sbjct: 1000 AKALLQALERNDTILEVWLRGN 1021



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 88/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 863  MAKLLACRQNFLALRLGNNHITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEA 922

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N I   G  SLAE L +N
Sbjct: 923  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHIQDEGVCSLAEGLKKN 982

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN    E +  L
Sbjct: 983  SSLKILKLSNNCITYLGAKALLQALERNDTILEVWLRGNIFSLEEVDKL 1031



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 1/205 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL        L 
Sbjct: 818  KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALR 877

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G   LAE L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 878  LGNNHITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 937

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +IG  G +AL   L ++   L  L +  N I  +G   +AE +K   SL  + L  N I 
Sbjct: 938  NIGSVGAQALALML-AKNVMLEELCLEENHIQDEGVCSLAEGLKKNSSLKILKLSNNCIT 996

Query: 401  DEGAEKIADALKQNRTITTIDLGGN 425
              GA+ +  AL++N TI  + L GN
Sbjct: 997  YLGAKALLQALERNDTILEVWLRGN 1021



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 88/174 (50%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F ++ +   +    G   LAE L  N + + + F 
Sbjct: 848  LALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGAQVLAEGLRGNTSLQFLGFW 907

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A    L  + +L+ L+L GN IG  G + L  +L  N  +E L L    +
Sbjct: 908  GNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHI 967

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            +DEG  ++AE LK NS L++L+L+NN I Y G  +L +AL  N TI  + L GN
Sbjct: 968  QDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAKALLQALERNDTILEVWLRGN 1021



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 88/196 (44%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 826  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 885

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  N  ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 886  AGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 945

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N I   G +AL+ 
Sbjct: 946  ALALMLAKNVMLEELCLEENHIQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAKALLQ 1005

Query: 353  GLSSRKGKLAVLDIGN 368
             L      L V   GN
Sbjct: 1006 ALERNDTILEVWLRGN 1021


>gi|123408503|ref|XP_001303210.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121884571|gb|EAX90280.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 678

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 174/368 (47%), Gaps = 19/368 (5%)

Query: 201 GITAAGIKAFDGVLQSNIAL---KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
           GI A   + FD  LQ+ +     K   ++   +G +    +  ++  +  ++ L ++   
Sbjct: 50  GIFATN-QLFDRFLQNQVRKSFSKIFEMNSCSLGPKAASAVAKVVFAHPHIKLLSINGNS 108

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG--- 314
           + ++G   IAEL+  +  L  +++++N I  SG  ++  A+  N TI SL +  + G   
Sbjct: 109 IGNKGVLQIAELIYRSHTLISVDVSSNSIGDSGAKAVFMAMKSNKTIVSLSIGSSTGVSR 168

Query: 315 ---GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
              G+  A  L+  L+ N  L +L ++   I  + I  + +GL      L VL++GNN+I
Sbjct: 169 NSLGSSSAAELSSLLKENHVLSDLDINMCEITQDTISTIATGLKFNHT-LQVLNLGNNNI 227

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
            +KG   +   I N + +  +N+  N I D+ A        +N  I ++++ GN+     
Sbjct: 228 CSKGCRKLLHAIMNSQ-ITTLNISNNHIKDDTAPIFVQYFTKNDKIRSLNIAGNHFTKVF 286

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
             AIA+   D S IT L++++NP+G+ G       +  +  +  L +  CQI +   +  
Sbjct: 287 TKAIAQTFADCSQITDLNMSHNPLGSQGIDEFGVAIANNHYLQNLNISMCQIDSINFQSF 346

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDG------A 545
            + L  N++I  L+L  N + D+GA  L    K  +  L  IDL   EI D G       
Sbjct: 347 CNKLEKNSSILNLNLSHNPIGDQGAVMLCNVIK-KHPTLVDIDLELCEITDVGGDQLIPC 405

Query: 546 FAIAQALK 553
           F ++Q ++
Sbjct: 406 FEVSQTIQ 413



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 156/351 (44%), Gaps = 36/351 (10%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL--- 225
           ++G + G++G+  +AE +  + T   V  ++N I  +G KA    ++SN  + +L++   
Sbjct: 104 INGNSIGNKGVLQIAELIYRSHTLISVDVSSNSIGDSGAKAVFMAMKSNKTIVSLSIGSS 163

Query: 226 ---SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
              S N +G      L  +L +N  +  L ++  ++  +    IA  LK N  L+VL L 
Sbjct: 164 TGVSRNSLGSSSAAELSSLLKENHVLSDLDINMCEITQDTISTIATGLKFNHTLQVLNLG 223

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           NN I   G   L  A++ NS I +L+++ N+     A    +    N  +R L++ GN  
Sbjct: 224 NNNICSKGCRKLLHAIM-NSQITTLNISNNHIKDDTAPIFVQYFTKNDKIRSLNIAGNHF 282

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
                +A                             +A+   +C  +  +N+  N +G +
Sbjct: 283 TKVFTKA-----------------------------IAQTFADCSQITDLNMSHNPLGSQ 313

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           G ++   A+  N  +  +++    I S    +    L+ NS I +L+L++NPIG  GA  
Sbjct: 314 GIDEFGVAIANNHYLQNLNISMCQIDSINFQSFCNKLEKNSSILNLNLSHNPIGDQGAVM 373

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           L  V+K H  +  + L  C+I   G + +      + TI  + ++ N +R+
Sbjct: 374 LCNVIKKHPTLVDIDLELCEITDVGGDQLIPCFEVSQTIQRVSVKNNLVRN 424


>gi|426382153|ref|XP_004057684.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Gorilla gorilla gorilla]
          Length = 1040

 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 123/244 (50%), Gaps = 5/244 (2%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 775  GPAECAALAFVLQHLRQPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 830

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I + GA  
Sbjct: 831  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGAQV 890

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 891  LAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 950

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            L  N  +  L L  N L+DEG   LA+  K  N +L  + L+ N I   GA A+ QAL+ 
Sbjct: 951  LAKNVMLEELCLEENHLQDEGVCSLAEGLK-KNSSLKILKLSNNCITYLGAEALLQALER 1009

Query: 555  NEDV 558
            N+ +
Sbjct: 1010 NDTI 1013



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 764  VGHLKLTFCSVGPAECAALAFVLQHLRQPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 820

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 821  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 879

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 880  NNHITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 939

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    I   G
Sbjct: 940  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 999

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            AE +   L  N+TI  + LR N
Sbjct: 1000 AEALLQALERNDTILEVWLRGN 1021



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL        L 
Sbjct: 818  KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALR 877

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G   LAE L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 878  LGNNHITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 937

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +IG  G +AL   L ++   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 938  NIGSVGAQALALML-AKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCIT 996

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNI 427
              GAE +  AL++N TI  + L GN  
Sbjct: 997  YLGAEALLQALERNDTILEVWLRGNTF 1023



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 863  MAKLLACRQNFLALRLGNNHITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEA 922

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L +N
Sbjct: 923  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 982

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +  L
Sbjct: 983  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 1031



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 88/174 (50%)

Query: 139  LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
            L+ F  KL      ++ +     + F ++ +   +    G   LAE L  N + + + F 
Sbjct: 848  LALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITAAGAQVLAEGLRGNTSLQFLGFW 907

Query: 199  ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
             N +   G +A    L  + +L+ L+L GN IG  G + L  +L  N  +E L L    L
Sbjct: 908  GNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHL 967

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            +DEG  ++AE LK NS L++L+L+NN I Y G  +L +AL  N TI  + L GN
Sbjct: 968  QDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGN 1021



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 87/197 (44%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 826  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITA 885

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  N  ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 886  AGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 945

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N I   G  AL+ 
Sbjct: 946  ALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQ 1005

Query: 353  GLSSRKGKLAVLDIGNN 369
             L      L V   GN 
Sbjct: 1006 ALERNDTILEVWLRGNT 1022


>gi|164562265|gb|ABY61044.1| nucleotide-binding oligomerization domain containing 2 [Sus scrofa]
          Length = 1013

 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 121/235 (51%), Gaps = 6/235 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  NS+GD G+  L+  L+  K     L + +N+IS +G   + E+   C+ L  + L
Sbjct: 768 LQLDHNSVGDIGVEQLLPCLNVCKA----LYLRDNNISDRGFCKLVEHALCCEQLQKLAL 823

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N + D  A  +A  L   R    + LG N+  + GA  +A+ L+ N+ +  L    N 
Sbjct: 824 FNNKLTDGRAHSMARLLACKRNFLALRLGNNHFTAVGAQVLAQGLRANTSLQFLGFWGNQ 883

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G  GA+AL+E L+ + ++  L L    IG+ GA+ +A ML  N  +  L L  N ++DE
Sbjct: 884 VGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQALALMLEKNMALEELCLEENHVQDE 943

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
           G   LA+  +  N +L  + L+ N +   GA A+ QAL+ N+ +    L   NNF
Sbjct: 944 GVCSLARGLE-RNSSLKVLKLSNNHVTSRGAEALLQALEQNDTILEVWLR-GNNF 996



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 142/279 (50%), Gaps = 4/279 (1%)

Query: 243  VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
            V    V  L+L+   +      A+A +L++      L+L++N +   G   L   L   +
Sbjct: 732  VSRLNVGHLKLTFCSVGPAECAALAFVLRHLQWPVALQLDHNSVGDIGVEQLLPCL---N 788

Query: 303  TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
              ++L+L  N     G   L +     + L++L L  N + D    ++   L+ ++  LA
Sbjct: 789  VCKALYLRDNNISDRGFCKLVEHALCCEQLQKLALFNNKLTDGRAHSMARLLACKRNFLA 848

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
             L +GNN  +A GA  +A+ ++   SL ++  + N +GD+GA+ +A+AL+ N+++  + L
Sbjct: 849  -LRLGNNHFTAVGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSL 907

Query: 423  GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             GNNI S GA A+A +L+ N  +  L L  N +  +G  +L+  L+ + ++  LKL    
Sbjct: 908  VGNNIGSVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNH 967

Query: 483  IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
            + + GAE +   L  N+TI  + LR N    E  + L+Q
Sbjct: 968  VTSRGAEALLQALEQNDTILEVWLRGNNFSPEETEQLSQ 1006



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 81/151 (53%)

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
            N  TA G +     L++N +L+ L   GN +GD+G + L + L DN  ++ L L   ++ 
Sbjct: 854  NHFTAVGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSLVGNNIG 913

Query: 260  DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
              GA+A+A +L+ N  L  L L  N +   G  SLA  L  NS+++ L L+ N+  + GA
Sbjct: 914  SVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGA 973

Query: 320  NALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             AL + LE N ++ E+ L GN+   E    L
Sbjct: 974  EALLQALEQNDTILEVWLRGNNFSPEETEQL 1004



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 81/151 (53%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R F ++ +   +F   G   LA+ L  N + + + F  N +   G +A    L+ N +LK
Sbjct: 844 RNFLALRLGNNHFTAVGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQSLK 903

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L GN IG  G + L  +L  N  +E L L    ++DEG  ++A  L+ NS L+VL+L
Sbjct: 904 WLSLVGNNIGSVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKL 963

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           +NN +   G  +L +AL +N TI  + L GN
Sbjct: 964 SNNHVTSRGAEALLQALEQNDTILEVWLRGN 994



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 85/197 (43%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G   L E     +  ++++   N +T     +   +L        L L  N    
Sbjct: 799 NISDRGFCKLVEHALCCEQLQKLALFNNKLTDGRAHSMARLLACKRNFLALRLGNNHFTA 858

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L   L  N  ++ L      + D+GA+A+AE L++N  L+ L L  N I   G  
Sbjct: 859 VGAQVLAQGLRANTSLQFLGFWGNQVGDKGAQALAEALRDNQSLKWLSLVGNNIGSVGAQ 918

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA  L +N  +  L L  N+    G  +LA+GLE N SL+ L L  N +   G  AL+ 
Sbjct: 919 ALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKVLKLSNNHVTSRGAEALLQ 978

Query: 353 GLSSRKGKLAVLDIGNN 369
            L      L V   GNN
Sbjct: 979 ALEQNDTILEVWLRGNN 995


>gi|76607731|ref|XP_590280.2| PREDICTED: leucine-rich repeat-containing protein 34 [Bos taurus]
 gi|297471139|ref|XP_002684978.1| PREDICTED: leucine-rich repeat-containing protein 34 [Bos taurus]
 gi|296491193|tpg|DAA33266.1| TPA: nucleotide-binding oligomerization domain containing 1-like
           [Bos taurus]
          Length = 451

 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 36/252 (14%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N +S  GA++ A+ ++  ++L+++NL  NDIG EG E IA AL +NRT+  + + 
Sbjct: 115 LDVRYNLLSDVGAYYAAKLLQKQQNLIYLNLMFNDIGPEGGELIAKALHKNRTLKHLRMT 174

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL------- 476
           GN I +KG    A +L+ NS +  LDL    +G     A + VL  +  I  L       
Sbjct: 175 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMPSVIAFATVLTQNQTIKGLNLNRPIL 234

Query: 477 ----------------------KLGWCQ--IGASGAEFVADMLRYNNTISILDLRANGLR 512
                                 +L  C+  I   G + + D L  N ++  LD+  N + 
Sbjct: 235 YGEQEESTVHLGHMLKENQCLVELHMCKHDIKNCGMKQLCDALHLNRSLQYLDVSCNKIT 294

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN----EDVAVTSLNLANN 568
            +G KCLA   K  N  L  IDL+FN + + GA  ++ AL ++    + ++V S N+   
Sbjct: 295 QDGMKCLADVLK-SNTTLEVIDLSFNRMENAGANYLSDALASHNRTLKALSVVSNNIEGK 353

Query: 569 FLTKFGQSALTD 580
            L    QS  T+
Sbjct: 354 GLVALSQSMKTN 365



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 164/376 (43%), Gaps = 23/376 (6%)

Query: 114 MPKPSRPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQ--------TLNEFAKELR--- 162
           +P  SR   P     + SV A    L  +   L  E  Q         L E  KE+    
Sbjct: 16  LPASSRTPTPAWAAADDSVSASIGGLQEYYYDLCMEKSQEIKPFILQILQEVDKEIEKGS 75

Query: 163 -------AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
                  A +S  +SG     E  + L   L  N     +    N ++  G      +LQ
Sbjct: 76  VGITLNIAGNSRSVSGERVTGEDFWILCRVLKNNSYINGLDVRYNLLSDVGAYYAAKLLQ 135

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
               L  LNL  N IG EG + +   L  N  ++ L+++   + ++G    A +L+ NS 
Sbjct: 136 KQQNLIYLNLMFNDIGPEGGELIAKALHKNRTLKHLRMTGNKIENKGGMFFAAMLQINSS 195

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--YGGALGANA-LAKGLEGNKSL 332
           L  L+L +  +      + A  L +N TI+ L+LN    YG    +   L   L+ N+ L
Sbjct: 196 LEKLDLGDCDLGMPSVIAFATVLTQNQTIKGLNLNRPILYGEQEESTVHLGHMLKENQCL 255

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            ELH+  + I + G++ L   L   +  L  LD+  N I+  G   +A+ +K+  +L  I
Sbjct: 256 VELHMCKHDIKNCGMKQLCDALHLNR-SLQYLDVSCNKITQDGMKCLADVLKSNTTLEVI 314

Query: 393 NLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +L  N + + GA  ++DAL   NRT+  + +  NNI  KG  A+++ +K N  ++ + + 
Sbjct: 315 DLSFNRMENAGANYLSDALASHNRTLKALSVVSNNIEGKGLVALSQSMKTNPTLSHIYIW 374

Query: 452 YNPIGADGAKALSEVL 467
            N        A S+++
Sbjct: 375 GNKFDEATCVAYSDLI 390



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 9/299 (3%)

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           F  L   L  NS I  L +  N    +GA   AK L+  ++L  L+L  N IG EG   +
Sbjct: 99  FWILCRVLKNNSYINGLDVRYNLLSDVGAYYAAKLLQKQQNLIYLNLMFNDIGPEGGELI 158

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              L   +  L  L +  N I  KG    A  ++   SL  ++L   D+G       A  
Sbjct: 159 AKALHKNR-TLKHLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMPSVIAFATV 217

Query: 411 LKQNRTITTIDLGGNNIHSKGASA---IARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           L QN+TI  ++L    ++ +   +   +  +LK+N  +  L +  + I   G K L + L
Sbjct: 218 LTQNQTIKGLNLNRPILYGEQEESTVHLGHMLKENQCLVELHMCKHDIKNCGMKQLCDAL 277

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
             + ++  L +   +I   G + +AD+L+ N T+ ++DL  N + + GA  L+ +    N
Sbjct: 278 HLNRSLQYLDVSCNKITQDGMKCLADVLKSNTTLEVIDLSFNRMENAGANYLSDALASHN 337

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 586
             L ++ +  N I   G  A++Q++K N  ++   +     +  KF ++      DL++
Sbjct: 338 RTLKALSVVSNNIEGKGLVALSQSMKTNPTLSHIYI-----WGNKFDEATCVAYSDLIH 391


>gi|405975257|gb|EKC39838.1| T-complex-associated testis-expressed protein 1 [Crassostrea gigas]
          Length = 521

 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 109/200 (54%), Gaps = 1/200 (0%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           LA+ +   K L+   LH + + D+ +R L+S +    G L  LD+ +N IS +GA  + +
Sbjct: 286 LAQCVAATKGLKVFRLHRSKVDDDKVRVLISHILDHPG-LTELDLSHNVISDRGARAIGK 344

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           ++ N   L+ +NL  ND+   GA+ IA AL +N T+T +++  N +  +G  AI + L  
Sbjct: 345 FLNNHSQLVKLNLCDNDVRHSGAQAIAHALTKNTTLTDLNIRLNRLGDEGGQAICKALLK 404

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ + ++++A + +G   A   S+V+  +  + ++ L   ++GA G + + + +  N TI
Sbjct: 405 NTTLCNINMASSDLGEPTAAIFSQVVMQNTTLKSVDLSSNRLGAEGGKQIQEGMEDNTTI 464

Query: 502 SILDLRANGLRDEGAKCLAQ 521
           + +DLR      E   C+ Q
Sbjct: 465 THMDLRLTDSGQEAEYCINQ 484



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 1/196 (0%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK   L  + + D+ V+ L   ++D+ G+  L LS   + D GA+AI + L N+S L  L
Sbjct: 296 LKVFRLHRSKVDDDKVRVLISHILDHPGLTELDLSHNVISDRGARAIGKFLNNHSQLVKL 355

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L +N + +SG  ++A AL +N+T+  L++  N  G  G  A+ K L  N +L  +++  
Sbjct: 356 NLCDNDVRHSGAQAIAHALTKNTTLTDLNIRLNRLGDEGGQAICKALLKNTTLCNINMAS 415

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           + +G E   A+ S +  +   L  +D+ +N + A+G   + E +++  ++  ++L + D 
Sbjct: 416 SDLG-EPTAAIFSQVVMQNTTLKSVDLSSNRLGAEGGKQIQEGMEDNTTITHMDLRLTDS 474

Query: 400 GDEGAEKIADALKQNR 415
           G E    I   L +N+
Sbjct: 475 GQEAEYCINQILHRNQ 490



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 105/221 (47%), Gaps = 6/221 (2%)

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           +A+    +A+ +   K L    L+ + + D+    +   +  +  +T +DL  N I  +G
Sbjct: 279 TARDCLLLAQCVAATKGLKVFRLHRSKVDDDKVRVLISHILDHPGLTELDLSHNVISDRG 338

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A AI + L ++S +  L+L  N +   GA+A++  L  +  +  L +   ++G  G + +
Sbjct: 339 ARAIGKFLNNHSQLVKLNLCDNDVRHSGAQAIAHALTKNTTLTDLNIRLNRLGDEGGQAI 398

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
              L  N T+  +++ ++ L +  A   +Q   + N  L S+DL+ N +  +G   I + 
Sbjct: 399 CKALLKNTTLCNINMASSDLGEPTAAIFSQVV-MQNTTLKSVDLSSNRLGAEGGKQIQEG 457

Query: 552 LKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKE 592
           ++ N    +T ++L    LT  GQ A      +++   E+E
Sbjct: 458 MEDN--TTITHMDLR---LTDSGQEAEYCINQILHRNQERE 493



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 73/146 (50%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +D+S     D G   + + L  +    +++   N +  +G +A    L  N  L  L
Sbjct: 324 LTELDLSHNVISDRGARAIGKFLNNHSQLVKLNLCDNDVRHSGAQAIAHALTKNTTLTDL 383

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           N+  N +GDEG + +C  L+ N  +  + ++S DL +  A   ++++  N+ L+ ++L++
Sbjct: 384 NIRLNRLGDEGGQAICKALLKNTTLCNINMASSDLGEPTAAIFSQVVMQNTTLKSVDLSS 443

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHL 309
           N +   G   + E + +N+TI  + L
Sbjct: 444 NRLGAEGGKQIQEGMEDNTTITHMDL 469



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 73/153 (47%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E+  + N I+  G +A    L ++  L  LNL  N +   G + +   L  N  +  L +
Sbjct: 326 ELDLSHNVISDRGARAIGKFLNNHSQLVKLNLCDNDVRHSGAQAIAHALTKNTTLTDLNI 385

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               L DEG +AI + L  N+ L  + + ++ +        ++ +++N+T++S+ L+ N 
Sbjct: 386 RLNRLGDEGGQAICKALLKNTTLCNINMASSDLGEPTAAIFSQVVMQNTTLKSVDLSSNR 445

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
            GA G   + +G+E N ++  + L     G E 
Sbjct: 446 LGAEGGKQIQEGMEDNTTITHMDLRLTDSGQEA 478


>gi|157817121|ref|NP_001101676.1| T-complex-associated testis-expressed protein 1 [Rattus norvegicus]
 gi|149069293|gb|EDM18734.1| t-complex-associated testis expressed 1 (predicted) [Rattus
           norvegicus]
          Length = 498

 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 114/221 (51%), Gaps = 3/221 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L 
Sbjct: 254 FEWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 313

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N 
Sbjct: 314 HNLIGDRGARAAAKLLS--HSRLRVLNLANNQLRASGAQSLAHALAHNTNLVSLNLRLNC 371

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + IA AL+ N+ +T ++LGGN +    A+ +++VL  N+ + SL+L+ N IG D
Sbjct: 372 IEDEGGQAIAHALETNKCLTVLNLGGNELSEPTATLLSQVLPVNTTLISLNLSCNHIGQD 431

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           G K L E +  +  I    L    + A  +E++   + +NN
Sbjct: 432 GGKQLLEGMSDNKTILEFDLRLSDV-AQESEYLIGQVLHNN 471



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 270 AATIKACH-------TLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGA 322

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +A A+LL ++S LRVL L NN +  SG  SLA AL  N+ + SL+L  N     G  A+A
Sbjct: 323 RAAAKLL-SHSRLRVLNLANNQLRASGAQSLAHALAHNTNLVSLNLRLNCIEDEGGQAIA 381

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             LE NK L  L+L GN +  E    L+S +      L  L++  N I   G   + E +
Sbjct: 382 HALETNKCLTVLNLGGNELS-EPTATLLSQVLPVNTTLISLNLSCNHIGQDGGKQLLEGM 440

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K++L  +L ++D+  E    I   L  NR
Sbjct: 441 SDNKTILEFDLRLSDVAQESEYLIGQVLHNNR 472



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 12/215 (5%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+    L  + +    A  + R L D+
Sbjct: 247 VKDCGMNFEWNLFLFTYRD--CHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDH 304

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  LDL++N IG  GA+A +++L  H  +  L L   Q+ ASGA+ +A  L +N  + 
Sbjct: 305 PALEELDLSHNLIGDRGARAAAKLLS-HSRLRVLNLANNQLRASGAQSLAHALAHNTNLV 363

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L+LR N + DEG + +A + +  N+ LT ++L  NE+ +  A  ++Q L  N    + S
Sbjct: 364 SLNLRLNCIEDEGGQAIAHALE-TNKCLTVLNLGGNELSEPTATLLSQVLPVN--TTLIS 420

Query: 563 LNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
           LNL+ N + + G       K L+  MS+ +  + F
Sbjct: 421 LNLSCNHIGQDG------GKQLLEGMSDNKTILEF 449



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 2/211 (0%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R L+  L      L  LD+ +N I  +GA  
Sbjct: 266 CHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPA-LEELDLSHNLIGDRGARA 324

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  AIA  
Sbjct: 325 AAKLLSHSR-LRVLNLANNQLRASGAQSLAHALAHNTNLVSLNLRLNCIEDEGGQAIAHA 383

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T L+L  N +    A  LS+VL  +  + +L L    IG  G + + + +  N
Sbjct: 384 LETNKCLTVLNLGGNELSEPTATLLSQVLPVNTTLISLNLSCNHIGQDGGKQLLEGMSDN 443

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
            TI   DLR + +  E    + Q      EA
Sbjct: 444 KTILEFDLRLSDVAQESEYLIGQVLHNNREA 474



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 4/208 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 254 FEWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSKVDDDKARILIRSLLDHPALEELDLS 313

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +A   +L S+  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 314 HNLIGDRGARAAAKLL-SHSRLRVLNLANNQLRASGAQSLAHALAHNTNLVSLNLRLNCI 372

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +AIA  L+ N  L VL L  N +     T L++ L  N+T+ SL+L+ N+ G  G
Sbjct: 373 EDEGGQAIAHALETNKCLTVLNLGGNELSEPTATLLSQVLPVNTTLISLNLSCNHIGQDG 432

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEG 346
              L +G+  NK++ E  L  + +  E 
Sbjct: 433 GKQLLEGMSDNKTILEFDLRLSDVAQES 460



 Score = 43.1 bits (100), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 45/98 (45%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           DEG   +A +L  N+    ++   N ++         VL  N  L +LNLS N IG +G 
Sbjct: 374 DEGGQAIAHALETNKCLTVLNLGGNELSEPTATLLSQVLPVNTTLISLNLSCNHIGQDGG 433

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           K L + + DN  +    L   D+  E    I ++L NN
Sbjct: 434 KQLLEGMSDNKTILEFDLRLSDVAQESEYLIGQVLHNN 471


>gi|194215961|ref|XP_001494453.2| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Equus
            caballus]
          Length = 1061

 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 148/321 (46%), Gaps = 18/321 (5%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDIL------VDNAGVERLQLSSVDLRDEGAKAIA 267
            L +N  L  L L  N +G  GVK LC  L      + N  ++R QLS     D  A  IA
Sbjct: 709  LSTNPNLIELVLYRNALGSRGVKLLCQGLRHPNCKLQNLRLKRCQLSGPACWDLAAALIA 768

Query: 268  ELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGL 326
                N +++R ++L+ N +   G   L E L      ++ + L      A     +A  L
Sbjct: 769  ----NKNLIR-MDLSGNGLGLPGIRLLCEGLRHPRCRLQMIQLRKCQLEAGACREIASVL 823

Query: 327  EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
              N+ L EL L GN++ D G R L  GLS+   +L +L +    ++A     +A  +   
Sbjct: 824  STNRHLVELDLTGNALEDLGGRLLCEGLSNPVCRLQILWLKICRLTAAACEDLASTLSVN 883

Query: 387  KSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            +SL+ ++L +ND+GD G   + + L+  +  + T+ LG   + S     ++ VL+ N  +
Sbjct: 884  QSLVELDLSLNDLGDAGVLLLCEGLRHPQCKLQTLRLGICQLSSAACEGLSAVLQVNPHL 943

Query: 446  TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW---CQIGASGAEFVADMLRYNNTIS 502
              LDL++N +G  G   L E L+ H      KL W   C + A   E ++  L  N T+ 
Sbjct: 944  RELDLSFNDLGDRGVWLLCEGLR-HPTCRLQKL-WLDSCGLTAKACEALSCSLGVNRTLR 1001

Query: 503  ILDLRANGLRDEGAKCLAQSF 523
             L L  N L D G + L +  
Sbjct: 1002 ELYLTHNALGDTGVRLLCKRL 1022



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 34/267 (12%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           +  LA  L  N +L EL L+ N++G  G++ L  GL     KL  L +    +S    + 
Sbjct: 702 SEQLASALSTNPNLIELVLYRNALGSRGVKLLCQGLRHPNCKLQNLRLKRCQLSGPACWD 761

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIAR 437
           +A  +   K+L+ ++L  N +G  G   + + L+  R  +  I L    + +     IA 
Sbjct: 762 LAAALIANKNLIRMDLSGNGLGLPGIRLLCEGLRHPRCRLQMIQLRKCQLEAGACREIAS 821

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW---CQIGASGAEFVADM 494
           VL  N  +  LDL  N +   G + L E L     +  L++ W   C++ A+  E +A  
Sbjct: 822 VLSTNRHLVELDLTGNALEDLGGRLLCEGLS--NPVCRLQILWLKICRLTAAACEDLAST 879

Query: 495 LRYNNTISILDLRANGLRDEGA----------KCLAQSFKV------------------V 526
           L  N ++  LDL  N L D G           +C  Q+ ++                  V
Sbjct: 880 LSVNQSLVELDLSLNDLGDAGVLLLCEGLRHPQCKLQTLRLGICQLSSAACEGLSAVLQV 939

Query: 527 NEALTSIDLAFNEIRDDGAFAIAQALK 553
           N  L  +DL+FN++ D G + + + L+
Sbjct: 940 NPHLRELDLSFNDLGDRGVWLLCEGLR 966



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 3/270 (1%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGA 316
           L D  ++ +A  L  N  L  L L  N +   G   L + L   N  +++L L       
Sbjct: 697 LPDAYSEQLASALSTNPNLIELVLYRNALGSRGVKLLCQGLRHPNCKLQNLRLKRCQLSG 756

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                LA  L  NK+L  + L GN +G  GIR L  GL   + +L ++ +    + A   
Sbjct: 757 PACWDLAAALIANKNLIRMDLSGNGLGLPGIRLLCEGLRHPRCRLQMIQLRKCQLEAGAC 816

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
             +A  +   + L+ ++L  N + D G   + + L      +  + L    + +     +
Sbjct: 817 REIASVLSTNRHLVELDLTGNALEDLGGRLLCEGLSNPVCRLQILWLKICRLTAAACEDL 876

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADM 494
           A  L  N  +  LDL+ N +G  G   L E L+     + TL+LG CQ+ ++  E ++ +
Sbjct: 877 ASTLSVNQSLVELDLSLNDLGDAGVLLLCEGLRHPQCKLQTLRLGICQLSSAACEGLSAV 936

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           L+ N  +  LDL  N L D G   L +  +
Sbjct: 937 LQVNPHLRELDLSFNDLGDRGVWLLCEGLR 966



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 3/206 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIAL 220
            R    +D++G    D G   L E L       ++ +     +TAA  +     L  N +L
Sbjct: 827  RHLVELDLTGNALEDLGGRLLCEGLSNPVCRLQILWLKICRLTAAACEDLASTLSVNQSL 886

Query: 221  KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
              L+LS N +GD GV  LC+ L      ++ L+L    L     + ++ +L+ N  LR L
Sbjct: 887  VELDLSLNDLGDAGVLLLCEGLRHPQCKLQTLRLGICQLSSAACEGLSAVLQVNPHLREL 946

Query: 280  ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +L+ N +   G   L E L   +  ++ L L+     A    AL+  L  N++LREL+L 
Sbjct: 947  DLSFNDLGDRGVWLLCEGLRHPTCRLQKLWLDSCGLTAKACEALSCSLGVNRTLRELYLT 1006

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVL 364
             N++GD G+R L   LS     L VL
Sbjct: 1007 HNALGDTGVRLLCKRLSHAGCPLRVL 1032



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 7/250 (2%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+SG   G  G+  L E L + +   + +      + A   +    VL +N  L  L+L
Sbjct: 775  MDLSGNGLGLPGIRLLCEGLRHPRCRLQMIQLRKCQLEAGACREIASVLSTNRHLVELDL 834

Query: 226  SGNPIGDEGVKCLCDILVDNAGVERLQ---LSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            +GN + D G + LC+ L +   V RLQ   L    L     + +A  L  N  L  L+L+
Sbjct: 835  TGNALEDLGGRLLCEGLSNP--VCRLQILWLKICRLTAAACEDLASTLSVNQSLVELDLS 892

Query: 283  NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N +  +G   L E L      +++L L      +     L+  L+ N  LREL L  N 
Sbjct: 893  LNDLGDAGVLLLCEGLRHPQCKLQTLRLGICQLSSAACEGLSAVLQVNPHLRELDLSFND 952

Query: 342  IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            +GD G+  L  GL     +L  L + +  ++AK    ++  +   ++L  + L  N +GD
Sbjct: 953  LGDRGVWLLCEGLRHPTCRLQKLWLDSCGLTAKACEALSCSLGVNRTLRELYLTHNALGD 1012

Query: 402  EGAEKIADAL 411
             G   +   L
Sbjct: 1013 TGVRLLCKRL 1022



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 18/206 (8%)

Query: 383 IKNCKSLLWINL----YMNDIGD--EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
           +KNC++++ ++L    Y  D  D   GAE     L Q           N +    +  +A
Sbjct: 654 VKNCRNVVVLHLCGAAYSADEEDGLRGAEGPQAPLAQPPE-------RNILPDAYSEQLA 706

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN--INTLKLGWCQIGASGAEFVADM 494
             L  N  +  L L  N +G+ G K L + L+ H N  +  L+L  CQ+       +A  
Sbjct: 707 SALSTNPNLIELVLYRNALGSRGVKLLCQGLR-HPNCKLQNLRLKRCQLSGPACWDLAAA 765

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L  N  +  +DL  NGL   G + L +  +     L  I L   ++       IA  L  
Sbjct: 766 LIANKNLIRMDLSGNGLGLPGIRLLCEGLRHPRCRLQMIQLRKCQLEAGACREIASVLST 825

Query: 555 NEDVAVTSLNLANNFLTKFGQSALTD 580
           N    +  L+L  N L   G   L +
Sbjct: 826 NRH--LVELDLTGNALEDLGGRLLCE 849


>gi|399497858|emb|CCG20257.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +D  G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +     + G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           + + G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VDSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AIA ALK +   ++  L +A N +T
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|72390946|ref|XP_845767.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62175808|gb|AAX69935.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70802303|gb|AAZ12208.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 448

 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 174/339 (51%), Gaps = 5/339 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           +K ++LS N +G +G + +   + + +GV+ L L   D+  EG  A++ ++  +  LR+L
Sbjct: 68  VKVVHLSDNDLGPQGAQKVVTAM-NMSGVQDLLLCFNDVGREGCDALSNIVSISVNLRLL 126

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N +       L +A+  +++++ L L  N  G  GA  LA+ LE N  L  L +  
Sbjct: 127 DLRGNGLTPRCVHKLLKAVAVSTSLKRLGLGSNKLGPEGAALLARKLEKNTYLTSLDISL 186

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IG  G + +   +   +  L  + +  N +  +G   +   +K  +S+  + L  N  
Sbjct: 187 NEIGPGGAKPIAKLIEGPECVLECVQLYGNRLGPEGVSEILAAVKKNRSIKQLTLGNNHA 246

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNPIGAD 458
            D  A  +A  L++N ++  +D+  N + +      A+  L  NSV+ SL LA NP+ + 
Sbjct: 247 TDAVAADLAAMLRENTSLERLDIRLNTLTAAAVRVFAQDGLAQNSVLRSLCLAGNPLDSI 306

Query: 459 GAKALSE--VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
           G + +S+  +L     ++ L L  CQ+G  G   +A+++  ++TI+ ++L  N L DE +
Sbjct: 307 GGEDISQALILSQVTVLSHLDLSSCQLGPIGGMRIANLIGTSSTITDVNLSDNKLDDEAS 366

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             LA S  +   +++S++L+ NEI +  A  + +A + N
Sbjct: 367 ASLANSI-LNGVSISSLNLSANEIGEWSASNLIEATQRN 404



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 134/272 (49%), Gaps = 3/272 (1%)

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           ++ +HL+ N  G  GA  +   +  +  +++L L  N +G EG  AL S + S    L +
Sbjct: 68  VKVVHLSDNDLGPQGAQKVVTAMNMS-GVQDLLLCFNDVGREGCDAL-SNIVSISVNLRL 125

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N ++ +    + + +    SL  + L  N +G EGA  +A  L++N  +T++D+ 
Sbjct: 126 LDLRGNGLTPRCVHKLLKAVAVSTSLKRLGLGSNKLGPEGAALLARKLEKNTYLTSLDIS 185

Query: 424 GNNIHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            N I   GA  IA++++    V+  + L  N +G +G   +   +K + +I  L LG   
Sbjct: 186 LNEIGPGGAKPIAKLIEGPECVLECVQLYGNRLGPEGVSEILAAVKKNRSIKQLTLGNNH 245

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
              + A  +A MLR N ++  LD+R N L     +  AQ     N  L S+ LA N +  
Sbjct: 246 ATDAVAADLAAMLRENTSLERLDIRLNTLTAAAVRVFAQDGLAQNSVLRSLCLAGNPLDS 305

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            G   I+QAL  ++   ++ L+L++  L   G
Sbjct: 306 IGGEDISQALILSQVTVLSHLDLSSCQLGPIG 337



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 7/307 (2%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+ G       +  L +++  + + + +   +N +   G       L+ N  L +L++S
Sbjct: 126 LDLRGNGLTPRCVHKLLKAVAVSTSLKRLGLGSNKLGPEGAALLARKLEKNTYLTSLDIS 185

Query: 227 GNPIGDEGVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N IG  G K +  ++     V E +QL    L  EG   I   +K N  ++ L L NN 
Sbjct: 186 LNEIGPGGAKPIAKLIEGPECVLECVQLYGNRLGPEGVSEILAAVKKNRSIKQLTLGNNH 245

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK-GLEGNKSLRELHLHGN---S 341
              +    LA  L EN+++  L +  N   A      A+ GL  N  LR L L GN   S
Sbjct: 246 ATDAVAADLAAMLRENTSLERLDIRLNTLTAAAVRVFAQDGLAQNSVLRSLCLAGNPLDS 305

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IG E I   +  + S+   L+ LD+ +  +   G   +A  I    ++  +NL  N + D
Sbjct: 306 IGGEDISQAL--ILSQVTVLSHLDLSSCQLGPIGGMRIANLIGTSSTITDVNLSDNKLDD 363

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           E +  +A+++    +I++++L  N I    AS +    + N  + SL L  N I     K
Sbjct: 364 EASASLANSILNGVSISSLNLSANEIGEWSASNLIEATQRNFRMMSLVLHGNKINRTVQK 423

Query: 462 ALSEVLK 468
            +  +L+
Sbjct: 424 KIDTLLE 430



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 7/273 (2%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSGNPIGD 232
            G EG   LA  L  N     +  + N I   G K    +++     L+ + L GN +G 
Sbjct: 161 LGPEGAALLARKLEKNTYLTSLDISLNEIGPGGAKPIAKLIEGPECVLECVQLYGNRLGP 220

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           EGV  +   +  N  +++L L +    D  A  +A +L+ N+ L  L++  N +  +   
Sbjct: 221 EGVSEILAAVKKNRSIKQLTLGNNHATDAVAADLAAMLRENTSLERLDIRLNTLTAAAVR 280

Query: 293 SLAE-ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS--LRELHLHGNSIGD-EGIR 348
             A+  L +NS +RSL L GN   ++G   +++ L  ++   L  L L    +G   G+R
Sbjct: 281 VFAQDGLAQNSVLRSLCLAGNPLDSIGGEDISQALILSQVTVLSHLDLSSCQLGPIGGMR 340

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
             ++ L      +  +++ +N +  + +  +A  I N  S+  +NL  N+IG+  A  + 
Sbjct: 341 --IANLIGTSSTITDVNLSDNKLDDEASASLANSILNGVSISSLNLSANEIGEWSASNLI 398

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           +A ++N  + ++ L GN I+      I  +L++
Sbjct: 399 EATQRNFRMMSLVLHGNKINRTVQKKIDTLLEE 431


>gi|443692750|gb|ELT94280.1| hypothetical protein CAPTEDRAFT_227928 [Capitella teleta]
          Length = 389

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 132/264 (50%), Gaps = 2/264 (0%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           ++S    K + L G  + D G + L  ++  N  VE   +S  ++  +G+KA+A +L  N
Sbjct: 79  VESQFMSKVMRLRGQGLADAGTRALAVVMAKNNSVEEFDISDNNVHLKGSKALAAMLDTN 138

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             +  + +++N +   G   +  +L   S  +S+ ++         N +A  LE N S+R
Sbjct: 139 DTITDVNISDNQLGSVGIEEVCSSLASRSKTKSVKMSNVLMCDAAFNHIANLLEVNSSIR 198

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           E+ L  N++GD    AL   L + +  L VL++  N I  +GA  +A  +KN   L  ++
Sbjct: 199 EIDLSRNTLGDTSAVALGRILENTE-TLEVLNVSWNHIRCQGAKAIANGVKNNVGLTSLD 257

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N +G +G+  + +AL  NR++  ++L   N+ +  A A+    K+N  + +L L+ N
Sbjct: 258 LSWNGVGAQGSVALGEALSSNRSLRVLNLSRCNVCTNSAFALIAGFKENDTLRTLVLSNN 317

Query: 454 PIGADGAKALSEVLKFHGNINTLK 477
           P+ A     + E L   GN  TLK
Sbjct: 318 PLPASAPMLIVEGLLKTGNT-TLK 340



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 124/236 (52%), Gaps = 3/236 (1%)

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
           +V+ L    +  +G  +LA  + +N+++    ++ N     G+ ALA  L+ N ++ +++
Sbjct: 86  KVMRLRGQGLADAGTRALAVVMAKNNSVEEFDISDNNVHLKGSKALAAMLDTNDTITDVN 145

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF-HVAEYIKNCKSLLWINLY 395
           +  N +G  GI  + S L+SR    +V    +N +    AF H+A  ++   S+  I+L 
Sbjct: 146 ISDNQLGSVGIEEVCSSLASRSKTKSVK--MSNVLMCDAAFNHIANLLEVNSSIREIDLS 203

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N +GD  A  +   L+   T+  +++  N+I  +GA AIA  +K+N  +TSLDL++N +
Sbjct: 204 RNTLGDTSAVALGRILENTETLEVLNVSWNHIRCQGAKAIANGVKNNVGLTSLDLSWNGV 263

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           GA G+ AL E L  + ++  L L  C +  + A  +    + N+T+  L L  N L
Sbjct: 264 GAQGSVALGEALSSNRSLRVLNLSRCNVCTNSAFALIAGFKENDTLRTLVLSNNPL 319



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 29/241 (12%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           + G+   D G   LA  +  N + EE   + N +   G KA   +L +N  +  +N+S N
Sbjct: 90  LRGQGLADAGTRALAVVMAKNNSVEEFDISDNNVHLKGSKALAAMLDTNDTITDVNISDN 149

Query: 229 PIGDEGVKCLC----------------------------DILVDNAGVERLQLSSVDLRD 260
            +G  G++ +C                            ++L  N+ +  + LS   L D
Sbjct: 150 QLGSVGIEEVCSSLASRSKTKSVKMSNVLMCDAAFNHIANLLEVNSSIREIDLSRNTLGD 209

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
             A A+  +L+N   L VL ++ N I   G  ++A  +  N  + SL L+ N  GA G+ 
Sbjct: 210 TSAVALGRILENTETLEVLNVSWNHIRCQGAKAIANGVKNNVGLTSLDLSWNGVGAQGSV 269

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           AL + L  N+SLR L+L   ++      AL++G       L  L + NN + A     + 
Sbjct: 270 ALGEALSSNRSLRVLNLSRCNVCTNSAFALIAGF-KENDTLRTLVLSNNPLPASAPMLIV 328

Query: 381 E 381
           E
Sbjct: 329 E 329



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 30/233 (12%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L G  + D G RAL + + ++   +   DI +N++  KG+  +A  +    ++  +N+
Sbjct: 88  MRLRGQGLADAGTRAL-AVVMAKNNSVEEFDISDNNVHLKGSKALAAMLDTNDTITDVNI 146

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N +G  G E++  +L       ++ +    +     + IA +L+ NS I  +DL+ N 
Sbjct: 147 SDNQLGSVGIEEVCSSLASRSKTKSVKMSNVLMCDAAFNHIANLLEVNSSIREIDLSRNT 206

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G   A AL  +L+    +  L + W  I   GA+ +                ANG+++ 
Sbjct: 207 LGDTSAVALGRILENTETLEVLNVSWNHIRCQGAKAI----------------ANGVKN- 249

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
                       N  LTS+DL++N +   G+ A+ +AL +N  + V +L+  N
Sbjct: 250 ------------NVGLTSLDLSWNGVGAQGSVALGEALSSNRSLRVLNLSRCN 290



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 91/191 (47%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + V++S    G  G+  +  SL      + V  +   +  A       +L+ N +++ +
Sbjct: 141 ITDVNISDNQLGSVGIEEVCSSLASRSKTKSVKMSNVLMCDAAFNHIANLLEVNSSIREI 200

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +LS N +GD     L  IL +   +E L +S   +R +GAKAIA  +KNN  L  L+L+ 
Sbjct: 201 DLSRNTLGDTSAVALGRILENTETLEVLNVSWNHIRCQGAKAIANGVKNNVGLTSLDLSW 260

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N +   G  +L EAL  N ++R L+L+        A AL  G + N +LR L L  N + 
Sbjct: 261 NGVGAQGSVALGEALSSNRSLRVLNLSRCNVCTNSAFALIAGFKENDTLRTLVLSNNPLP 320

Query: 344 DEGIRALMSGL 354
                 ++ GL
Sbjct: 321 ASAPMLIVEGL 331



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 5/163 (3%)

Query: 154 LNEFAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
            N  A  L   SS+   D+S    GD     L   L   +T E ++ + N I   G KA 
Sbjct: 184 FNHIANLLEVNSSIREIDLSRNTLGDTSAVALGRILENTETLEVLNVSWNHIRCQGAKAI 243

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
              +++N+ L +L+LS N +G +G   L + L  N  +  L LS  ++    A A+    
Sbjct: 244 ANGVKNNVGLTSLDLSWNGVGAQGSVALGEALSSNRSLRVLNLSRCNVCTNSAFALIAGF 303

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLE--NSTIRSLHLNG 311
           K N  LR L L+NN +  S    + E LL+  N+T++S+H  G
Sbjct: 304 KENDTLRTLVLSNNPLPASAPMLIVEGLLKTGNTTLKSVHFEG 346


>gi|335290148|ref|XP_003127468.2| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Sus
            scrofa]
          Length = 1030

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 164/370 (44%), Gaps = 12/370 (3%)

Query: 158  AKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSN 217
            AK  R  + + + G  +  +G     + + + Q     S   N +  A  +     L ++
Sbjct: 654  AKNCRNAAVLQLYGAAYNADG----EDGVRWPQMPLAQSPERNLLPDAYSEQLAAALSTS 709

Query: 218  IALKTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
              L  L L  N +G  GVK LC  L   N  ++ L+L    +     + +A  L  N  L
Sbjct: 710  PNLVELVLYSNALGSRGVKLLCQGLGHPNCNLQNLRLKRCQISSSACQDLALALIANKHL 769

Query: 277  RVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
              ++L+ N +   G   L + L      ++ + L      A     +A  L  ++ L EL
Sbjct: 770  VRMDLSGNSLGLPGVKLLCKGLRHPKCRLQMVQLRKCQLEAGACQEIASVLSSSRHLEEL 829

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
             L GN++ D G+R L  GL     +L +L +    +SA     +A  +   +SL+ ++L 
Sbjct: 830  DLTGNALEDSGLRLLCQGLRHPVCRLRILWLKICQLSAAACEDLAATLSGNQSLMELDLS 889

Query: 396  MNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
            +N++GD G   + + L+  +  + T+ LG   + S     ++ VL+ N  +  LDL++N 
Sbjct: 890  LNELGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLSAVLQVNHHLQELDLSFND 949

Query: 455  IGADGAKALSEVLKFHGNINTLKLGW---CQIGASGAEFVADMLRYNNTISILDLRANGL 511
            +G  G   L E L+ H      KL W   C + A   E ++ ML  N T++ L L  N L
Sbjct: 950  LGDCGMSLLCEGLR-HPTCRLQKL-WLDSCGLTAKACEDLSSMLGVNQTLTELYLTNNVL 1007

Query: 512  RDEGAKCLAQ 521
             + G + L +
Sbjct: 1008 GNTGVRLLCK 1017



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 6/311 (1%)

Query: 174  FGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G  G+  L + LG+ N   + +      I+++  +     L +N  L  ++LSGN +G 
Sbjct: 722  LGSRGVKLLCQGLGHPNCNLQNLRLKRCQISSSACQDLALALIANKHLVRMDLSGNSLGL 781

Query: 233  EGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
             GVK LC  L      ++ +QL    L     + IA +L ++  L  L+L  N ++ SG 
Sbjct: 782  PGVKLLCKGLRHPKCRLQMVQLRKCQLEAGACQEIASVLSSSRHLEELDLTGNALEDSGL 841

Query: 292  TSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              L + L      +R L L      A     LA  L GN+SL EL L  N +GD G+  L
Sbjct: 842  RLLCQGLRHPVCRLRILWLKICQLSAAACEDLAATLSGNQSLMELDLSLNELGDPGVLLL 901

Query: 351  MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              GL   + KL  L +G   +S+     ++  ++    L  ++L  ND+GD G   + + 
Sbjct: 902  CEGLRHPQCKLQTLRLGICRLSSAACEGLSAVLQVNHHLQELDLSFNDLGDCGMSLLCEG 961

Query: 411  LKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L+     +  + L    + +K    ++ +L  N  +T L L  N +G  G + L + L  
Sbjct: 962  LRHPTCRLQKLWLDSCGLTAKACEDLSSMLGVNQTLTELYLTNNVLGNTGVRLLCKRLSH 1021

Query: 470  HGNINTLKLGW 480
             G    L++ W
Sbjct: 1022 PG--CKLRVLW 1030



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 137/320 (42%), Gaps = 5/320 (1%)

Query: 258  LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGA 316
            L D  ++ +A  L  +  L  L L +N +   G   L + L   N  +++L L      +
Sbjct: 694  LPDAYSEQLAAALSTSPNLVELVLYSNALGSRGVKLLCQGLGHPNCNLQNLRLKRCQISS 753

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                 LA  L  NK L  + L GNS+G  G++ L  GL   K +L ++ +    + A   
Sbjct: 754  SACQDLALALIANKHLVRMDLSGNSLGLPGVKLLCKGLRHPKCRLQMVQLRKCQLEAGAC 813

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
              +A  + + + L  ++L  N + D G   +   L+     +  + L    + +     +
Sbjct: 814  QEIASVLSSSRHLEELDLTGNALEDSGLRLLCQGLRHPVCRLRILWLKICQLSAAACEDL 873

Query: 436  ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADM 494
            A  L  N  +  LDL+ N +G  G   L E L+     + TL+LG C++ ++  E ++ +
Sbjct: 874  AATLSGNQSLMELDLSLNELGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLSAV 933

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            L+ N+ +  LDL  N L D G   L +  +     L  + L    +       ++  L  
Sbjct: 934  LQVNHHLQELDLSFNDLGDCGMSLLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSMLGV 993

Query: 555  NEDVAVTSLNLANNFLTKFG 574
            N+   +T L L NN L   G
Sbjct: 994  NQ--TLTELYLTNNVLGNTG 1011



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 3/206 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF-AANGITAAGIKAFDGVLQSNIAL 220
            R    +D++G    D GL  L + L +      + +     ++AA  +     L  N +L
Sbjct: 824  RHLEELDLTGNALEDSGLRLLCQGLRHPVCRLRILWLKICQLSAAACEDLAATLSGNQSL 883

Query: 221  KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
              L+LS N +GD GV  LC+ L      ++ L+L    L     + ++ +L+ N  L+ L
Sbjct: 884  MELDLSLNELGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLSAVLQVNHHLQEL 943

Query: 280  ELNNNMIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            +L+ N +   G + L E L   +  ++ L L+     A     L+  L  N++L EL+L 
Sbjct: 944  DLSFNDLGDCGMSLLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSMLGVNQTLTELYLT 1003

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVL 364
             N +G+ G+R L   LS    KL VL
Sbjct: 1004 NNVLGNTGVRLLCKRLSHPGCKLRVL 1029


>gi|156368361|ref|XP_001627663.1| predicted protein [Nematostella vectensis]
 gi|156214579|gb|EDO35563.1| predicted protein [Nematostella vectensis]
          Length = 163

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 87/158 (55%), Gaps = 3/158 (1%)

Query: 342 IGDEGIRAL-MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           + DE I AL M+ L   K  L  LD+  N IS+KG   +AE +   + L    L  N IG
Sbjct: 5   LADEFIAALAMTQL--HKPSLIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIG 62

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           DEGA  IA+ALK N T+  +DL  NNI ++GA AIA  L  NS +  L L  N IG +GA
Sbjct: 63  DEGAMSIANALKTNSTLKILDLTKNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDEGA 122

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
            A++  L  +  +  L    C I A GA  +ADML YN
Sbjct: 123 IAIANALMTNSTLKKLNFNTCGIRAVGAAALADMLYYN 160



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 73/133 (54%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           SL+ ++L +N I  +G   IA+ L +N+ + T  L  N I  +GA +IA  LK NS +  
Sbjct: 22  SLIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDEGAMSIANALKTNSTLKI 81

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           LDL  N IG +GAKA++  L  +  +  L L    IG  GA  +A+ L  N+T+  L+  
Sbjct: 82  LDLTKNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDEGAIAIANALMTNSTLKKLNFN 141

Query: 508 ANGLRDEGAKCLA 520
             G+R  GA  LA
Sbjct: 142 TCGIRAVGAAALA 154



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           +  LDL+ N I + G  A++E+L  +  + T  L + QIG  GA  +A+ L+ N+T+ IL
Sbjct: 23  LIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDEGAMSIANALKTNSTLKIL 82

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           DL  N + +EGAK +A +  + N  L  + L  N I D+GA AIA AL  N    +  LN
Sbjct: 83  DLTKNNIGNEGAKAIANAL-MTNSTLKKLHLCENNIGDEGAIAIANALMTNS--TLKKLN 139

Query: 565 LANNFLTKFGQSALTD 580
                +   G +AL D
Sbjct: 140 FNTCGIRAVGAAALAD 155



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 85/159 (53%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
             DE +  LA +  +  +  ++  + N I++ G  A   +L  N  L+T  LS N IGDE
Sbjct: 5   LADEFIAALAMTQLHKPSLIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDE 64

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   + + L  N+ ++ L L+  ++ +EGAKAIA  L  NS L+ L L  N I   G  +
Sbjct: 65  GAMSIANALKTNSTLKILDLTKNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDEGAIA 124

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           +A AL+ NST++ L+ N     A+GA ALA  L  N  L
Sbjct: 125 IANALMTNSTLKKLNFNTCGIRAVGAAALADMLYYNTEL 163



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 74/132 (56%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           +L  L+LS N I  +G   + ++L  N  +E   LS   + DEGA +IA  LK NS L++
Sbjct: 22  SLIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDEGAMSIANALKTNSTLKI 81

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L  N I   G  ++A AL+ NST++ LHL  N  G  GA A+A  L  N +L++L+ +
Sbjct: 82  LDLTKNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDEGAIAIANALMTNSTLKKLNFN 141

Query: 339 GNSIGDEGIRAL 350
              I   G  AL
Sbjct: 142 TCGIRAVGAAAL 153



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 1/160 (0%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           + DE    +A       ++  +DL  N I SKG  AIA +L  N  + +  L+YN IG +
Sbjct: 5   LADEFIAALAMTQLHKPSLIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDE 64

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA +++  LK +  +  L L    IG  GA+ +A+ L  N+T+  L L  N + DEGA  
Sbjct: 65  GAMSIANALKTNSTLKILDLTKNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDEGAIA 124

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           +A +  + N  L  ++     IR  GA A+A  L  N ++
Sbjct: 125 IANAL-MTNSTLKKLNFNTCGIRAVGAAALADMLYYNTEL 163



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 72/138 (52%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S      +G   +AE L  NQ  E    + N I   G  +    L++N  LK L+L+
Sbjct: 26  LDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDEGAMSIANALKTNSTLKILDLT 85

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IG+EG K + + L+ N+ +++L L   ++ DEGA AIA  L  NS L+ L  N   I
Sbjct: 86  KNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDEGAIAIANALMTNSTLKKLNFNTCGI 145

Query: 287 DYSGFTSLAEALLENSTI 304
              G  +LA+ L  N+ +
Sbjct: 146 RAVGAAALADMLYYNTEL 163



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 77/154 (50%), Gaps = 1/154 (0%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           + DE +  L    +    +  L LS   +  +G  AIAE+L  N  L    L+ N I   
Sbjct: 5   LADEFIAALAMTQLHKPSLIDLDLSLNKISSKGCIAIAEMLSKNQWLETFILSYNQIGDE 64

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  S+A AL  NST++ L L  N  G  GA A+A  L  N +L++LHL  N+IGDEG  A
Sbjct: 65  GAMSIANALKTNSTLKILDLTKNNIGNEGAKAIANALMTNSTLKKLHLCENNIGDEGAIA 124

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + + L +    L  L+     I A GA  +A+ +
Sbjct: 125 IANALMTN-STLKKLNFNTCGIRAVGAAALADML 157


>gi|156361881|ref|XP_001625512.1| predicted protein [Nematostella vectensis]
 gi|156212349|gb|EDO33412.1| predicted protein [Nematostella vectensis]
          Length = 401

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 146/293 (49%), Gaps = 7/293 (2%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           + DE    L   L  N  V  L L   ++ D+GAK I  LL+   +L+ L L+ N I   
Sbjct: 65  LDDEDADILYKTLKANTFVVSLDLGYNNIGDDGAKIIGVLLQETLVLQTLILSYNDIGPE 124

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   +A+ L  N T+R L LNGN  G  G  A+A  L+ N  L EL +    +  E + A
Sbjct: 125 GGEIIAKGLQVNETLRVLKLNGNKIGNKGGMAIAGTLQVNTVLEELDISEVDLKTESVIA 184

Query: 350 LMSGLSSRKGKLAVLDIGNN---SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            M+ + +    L VL I      S   +   H+A+ +K    L  ++L   DI D GAE+
Sbjct: 185 -MATVLNYNNTLKVLYINRPLLFSHQEETTVHMAKMLKVNIRLRELHLTHYDIRDFGAER 243

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
           I + L  N T+T ++L  NNI   GA  +A +LK N+ +  L+LAYN I  DGA A++E 
Sbjct: 244 IMEHLVDNLTLTHLNLASNNITRDGAKQLAILLKRNTPLEMLNLAYNRIEDDGAVAIAEA 303

Query: 467 LKFHGNINTLKLGWC--QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           L  + N N +KL  C   I + G   +A  ++ N  ++ + +  N L +   +
Sbjct: 304 LAAY-NTNLIKLVLCNNNIASQGLCALAKSMKSNVGLTSIYIWGNHLEEPACR 355



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 144/303 (47%), Gaps = 27/303 (8%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           S+D+   N GD+G   +   L      + +  + N I   G +     LQ N  L+ L L
Sbjct: 85  SLDLGYNNIGDDGAKIIGVLLQETLVLQTLILSYNDIGPEGGEIIAKGLQVNETLRVLKL 144

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
           +GN IG++G   +   L  N  +E L +S VDL+ E   A+A +L  N+ L+VL +N  +
Sbjct: 145 NGNKIGNKGGMAIAGTLQVNTVLEELDISEVDLKTESVIAMATVLNYNNTLKVLYINRPL 204

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           +    F+   E         ++H             +AK L+ N  LRELHL    I D 
Sbjct: 205 L----FSHQEET--------TVH-------------MAKMLKVNIRLRELHLTHYDIRDF 239

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G   +M  L      L  L++ +N+I+  GA  +A  +K    L  +NL  N I D+GA 
Sbjct: 240 GAERIMEHLVDNL-TLTHLNLASNNITRDGAKQLAILLKRNTPLEMLNLAYNRIEDDGAV 298

Query: 406 KIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            IA+AL   N  +  + L  NNI S+G  A+A+ +K N  +TS+ +  N +     +A  
Sbjct: 299 AIAEALAAYNTNLIKLVLCNNNIASQGLCALAKSMKSNVGLTSIYIWGNHLEEPACRAFQ 358

Query: 465 EVL 467
           ++L
Sbjct: 359 DLL 361



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 122/255 (47%), Gaps = 18/255 (7%)

Query: 334 ELHLHGNS-----------IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           EL LHGN            + DE    L   L +    ++ LD+G N+I   GA  +   
Sbjct: 46  ELRLHGNKRNERNEMYRRRLDDEDADILYKTLKANTFVVS-LDLGYNNIGDDGAKIIGVL 104

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           ++    L  + L  NDIG EG E IA  L+ N T+  + L GN I +KG  AIA  L+ N
Sbjct: 105 LQETLVLQTLILSYNDIGPEGGEIIAKGLQVNETLRVLKLNGNKIGNKGGMAIAGTLQVN 164

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE---FVADMLRYNN 499
           +V+  LD++   +  +   A++ VL ++  +  L +    + +   E    +A ML+ N 
Sbjct: 165 TVLEELDISEVDLKTESVIAMATVLNYNNTLKVLYINRPLLFSHQEETTVHMAKMLKVNI 224

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
            +  L L    +RD GA+ + +   V N  LT ++LA N I  DGA  +A  LK N    
Sbjct: 225 RLRELHLTHYDIRDFGAERIMEHL-VDNLTLTHLNLASNNITRDGAKQLAILLKRN--TP 281

Query: 560 VTSLNLANNFLTKFG 574
           +  LNLA N +   G
Sbjct: 282 LEMLNLAYNRIEDDG 296



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 154/337 (45%), Gaps = 38/337 (11%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           ER ++    L DE A  + + LK N+ +  L+L  N I   G   +   L E   +++L 
Sbjct: 56  ERNEMYRRRLDDEDADILYKTLKANTFVVSLDLGYNNIGDDGAKIIGVLLQETLVLQTLI 115

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N  G  G   +AKGL+ N++LR L L+GN IG++G  A+ +G       L  LDI  
Sbjct: 116 LSYNDIGPEGGEIIAKGLQVNETLRVLKLNGNKIGNKGGMAI-AGTLQVNTVLEELDISE 174

Query: 369 NSISAKGAFHVAEYIK--NCKSLLWIN---LYMNDIGDEGAEKIADALKQNRTITTIDLG 423
             +  +    +A  +   N   +L+IN   L+ +   +E    +A  LK N  +  + L 
Sbjct: 175 VDLKTESVIAMATVLNYNNTLKVLYINRPLLFSHQ--EETTVHMAKMLKVNIRLRELHLT 232

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
             +I   GA  I   L DN  +T L+LA N I  DGAK L                    
Sbjct: 233 HYDIRDFGAERIMEHLVDNLTLTHLNLASNNITRDGAKQL-------------------- 272

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
                   A +L+ N  + +L+L  N + D+GA  +A++    N  L  + L  N I   
Sbjct: 273 --------AILLKRNTPLEMLNLAYNRIEDDGAVAIAEALAAYNTNLIKLVLCNNNIASQ 324

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           G  A+A+++K+N  V +TS+ +  N L +    A  D
Sbjct: 325 GLCALAKSMKSN--VGLTSIYIWGNHLEEPACRAFQD 359


>gi|149068415|gb|EDM17967.1| rCG39476, isoform CRA_b [Rattus norvegicus]
          Length = 990

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 144/308 (46%), Gaps = 4/308 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEV-SFAANGITAAGIKAFDGVLQSNIALKTL 223
           + +D+   + GD G+  L E+L Y      V    +  +     +     LQSN +L  L
Sbjct: 630 THLDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRSLVFL 689

Query: 224 NLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NLS N + ++GVK LC++L + N  +ERL L+S  L   G + ++  L     L  L L 
Sbjct: 690 NLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSALTKTKRLTHLCLA 749

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N+++  G   L+  L     T++SL L   Y   +G+  L+  L+ NKSL  L L  N 
Sbjct: 750 HNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDLGFNK 809

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D G++ L   L      L  L++    ++++    +A  + N  +L  ++L  N + D
Sbjct: 810 LADSGVKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLWNLDLGNNILDD 869

Query: 402 EGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G   + +AL+  N  I  + L    +       +  +L +N  +  ++L  N +  +  
Sbjct: 870 AGLNILCEALRNPNCQIRRLGLENCGLTPGCCQDLLDLLSNNQSVIQMNLMKNSLDYEAI 929

Query: 461 KALSEVLK 468
           + L +VL+
Sbjct: 930 RNLCKVLR 937



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 142/307 (46%), Gaps = 6/307 (1%)

Query: 223 LNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+L    +GD GVK LC+ L      +  L+L S DL     + +++ L++N  L  L L
Sbjct: 632 LDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRSLVFLNL 691

Query: 282 NNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           + N +   G  SL E L   N  +  L L       +G   L+  L   K L  L L  N
Sbjct: 692 STNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSALTKTKRLTHLCLAHN 751

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            + DEGI  L   L   +  L  L +     +  G+ H++  ++N KSL+ ++L  N + 
Sbjct: 752 VLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDLGFNKLA 811

Query: 401 DEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           D G + +   L+Q N  +  ++L G  + S+    +A VL +NS + +LDL  N +   G
Sbjct: 812 DSGVKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLWNLDLGNNILDDAG 871

Query: 460 AKALSEVLKFHGNINTLKLGW--CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
              L E L+ + N    +LG   C +     + + D+L  N ++  ++L  N L  E  +
Sbjct: 872 LNILCEALR-NPNCQIRRLGLENCGLTPGCCQDLLDLLSNNQSVIQMNLMKNSLDYEAIR 930

Query: 518 CLAQSFK 524
            L +  +
Sbjct: 931 NLCKVLR 937



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 123/255 (48%), Gaps = 4/255 (1%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N ++  L L    +GD G++ L   L  +  KL VL + +  ++     ++++ +++ +S
Sbjct: 626 NNTVTHLDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRS 685

Query: 389 LLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           L+++NL  N + ++G + + + L+  N  +  + L    +   G   ++  L     +T 
Sbjct: 686 LVFLNLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSALTKTKRLTH 745

Query: 448 LDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           L LA+N +  +G + LS  L+     + +L L  C     G+E ++  L+ N ++  LDL
Sbjct: 746 LCLAHNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDL 805

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
             N L D G K L Q+ +  N  L  ++L    +  +    +A  L  N ++   +L+L 
Sbjct: 806 GFNKLADSGVKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLW--NLDLG 863

Query: 567 NNFLTKFGQSALTDA 581
           NN L   G + L +A
Sbjct: 864 NNILDDAGLNILCEA 878



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 29/282 (10%)

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  V  L L   DL D G K + E LK                Y G             +
Sbjct: 626 NNTVTHLDLKDTDLGDNGVKTLCEALK----------------YQG-----------CKL 658

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           R L L            L+K L+ N+SL  L+L  NS+ ++G+++L   L +    L  L
Sbjct: 659 RVLRLESCDLNVTHCQNLSKALQSNRSLVFLNLSTNSLSNDGVKSLCEVLENPNCPLERL 718

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLG 423
            + +  ++  G   ++  +   K L  + L  N + DEG E ++  L+  R T+ ++ L 
Sbjct: 719 ALASCGLTKVGCEVLSSALTKTKRLTHLCLAHNVLEDEGIELLSYTLRHPRCTLQSLVLR 778

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQ 482
                  G+  ++  L++N  +  LDL +N +   G K L + L+  + N+  L+L  C 
Sbjct: 779 CCYFTPIGSEHLSTALQNNKSLIHLDLGFNKLADSGVKLLCQTLQQPNCNLQELELMGCV 838

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           + +     +A +L  N+ +  LDL  N L D G   L ++ +
Sbjct: 839 LTSEACGDLASVLVNNSNLWNLDLGNNILDDAGLNILCEALR 880



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 94/193 (48%), Gaps = 5/193 (2%)

Query: 176 DEGLFFLAESLGYNQ-TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           DEG+  L+ +L + + T + +       T  G +     LQ+N +L  L+L  N + D G
Sbjct: 755 DEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDLGFNKLADSG 814

Query: 235 VKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           VK LC  L   N  ++ L+L    L  E    +A +L NNS L  L+L NN++D +G   
Sbjct: 815 VKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLWNLDLGNNILDDAGLNI 874

Query: 294 LAEALL-ENSTIRSLHLNGNYGGALGA-NALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           L EAL   N  IR L L  N G   G    L   L  N+S+ +++L  NS+  E IR L 
Sbjct: 875 LCEALRNPNCQIRRLGLE-NCGLTPGCCQDLLDLLSNNQSVIQMNLMKNSLDYEAIRNLC 933

Query: 352 SGLSSRKGKLAVL 364
             L S   K+  L
Sbjct: 934 KVLRSPTCKMEFL 946



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 34/181 (18%)

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           VL  N  +  +DL  + +     K L+E    H   N  K+ +  +    + +    L +
Sbjct: 567 VLHTNESLLEMDLYESRLDESLMKILNEEFS-HPKCNLQKVMFRAVCFLNSCYDFSFLAF 625

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKV----------------------------VNEA 529
           NNT++ LDL+   L D G K L ++ K                              N +
Sbjct: 626 NNTVTHLDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRS 685

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG----QSALTDAKDLV 585
           L  ++L+ N + +DG  ++ + L+ N +  +  L LA+  LTK G     SALT  K L 
Sbjct: 686 LVFLNLSTNSLSNDGVKSLCEVLE-NPNCPLERLALASCGLTKVGCEVLSSALTKTKRLT 744

Query: 586 Y 586
           +
Sbjct: 745 H 745


>gi|261329190|emb|CBH12169.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 448

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 174/339 (51%), Gaps = 5/339 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           +K ++LS N +G +G + +   + + +GV+ L L   D+  EG  A++ ++  +  LR+L
Sbjct: 68  VKVVHLSDNDLGPQGAQKVVTAM-NMSGVQDLLLCFNDVGREGCDALSNIVSISVNLRLL 126

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N +       L +A+  +++++ L L  N  G  GA  LA+ LE N  L  L +  
Sbjct: 127 DLRGNGLTPRCVHKLLKAVAVSTSLKRLGLGSNKLGPEGAALLARKLEKNTYLTSLDISL 186

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IG  G + +   +   +  L  + +  N +  +G   +   +K  +S+  + L  N  
Sbjct: 187 NEIGPGGAKPVAKLIEGPECVLECVQLYGNRLGPEGVSEILAAVKKNRSIKQLTLGNNHA 246

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV-LKDNSVITSLDLAYNPIGAD 458
            D  A  +A  L++N ++  +D+  N + +      A+  L  NSV+ SL LA NP+ + 
Sbjct: 247 TDAVAADLAAMLRENTSLERLDIRLNTLTAAAVRVFAQDGLAQNSVLRSLCLAGNPLDSI 306

Query: 459 GAKALSE--VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
           G + +S+  +L     ++ L L  CQ+G  G   +A+++  ++TI+ ++L  N L DE +
Sbjct: 307 GGEDISQALILSQVTVLSHLDLSSCQLGPIGGMRIANLIGTSSTITDVNLSDNKLDDEAS 366

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             LA S  +   +++S++L+ NEI +  A  + +A + N
Sbjct: 367 ASLANSI-LNGVSISSLNLSANEIGEWSASNLIEATQRN 404



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 134/272 (49%), Gaps = 3/272 (1%)

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           ++ +HL+ N  G  GA  +   +  +  +++L L  N +G EG  AL S + S    L +
Sbjct: 68  VKVVHLSDNDLGPQGAQKVVTAMNMS-GVQDLLLCFNDVGREGCDAL-SNIVSISVNLRL 125

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N ++ +    + + +    SL  + L  N +G EGA  +A  L++N  +T++D+ 
Sbjct: 126 LDLRGNGLTPRCVHKLLKAVAVSTSLKRLGLGSNKLGPEGAALLARKLEKNTYLTSLDIS 185

Query: 424 GNNIHSKGASAIARVLK-DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            N I   GA  +A++++    V+  + L  N +G +G   +   +K + +I  L LG   
Sbjct: 186 LNEIGPGGAKPVAKLIEGPECVLECVQLYGNRLGPEGVSEILAAVKKNRSIKQLTLGNNH 245

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
              + A  +A MLR N ++  LD+R N L     +  AQ     N  L S+ LA N +  
Sbjct: 246 ATDAVAADLAAMLRENTSLERLDIRLNTLTAAAVRVFAQDGLAQNSVLRSLCLAGNPLDS 305

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            G   I+QAL  ++   ++ L+L++  L   G
Sbjct: 306 IGGEDISQALILSQVTVLSHLDLSSCQLGPIG 337



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 7/307 (2%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+ G       +  L +++  + + + +   +N +   G       L+ N  L +L++S
Sbjct: 126 LDLRGNGLTPRCVHKLLKAVAVSTSLKRLGLGSNKLGPEGAALLARKLEKNTYLTSLDIS 185

Query: 227 GNPIGDEGVKCLCDILVDNAGV-ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
            N IG  G K +  ++     V E +QL    L  EG   I   +K N  ++ L L NN 
Sbjct: 186 LNEIGPGGAKPVAKLIEGPECVLECVQLYGNRLGPEGVSEILAAVKKNRSIKQLTLGNNH 245

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK-GLEGNKSLRELHLHGN---S 341
              +    LA  L EN+++  L +  N   A      A+ GL  N  LR L L GN   S
Sbjct: 246 ATDAVAADLAAMLRENTSLERLDIRLNTLTAAAVRVFAQDGLAQNSVLRSLCLAGNPLDS 305

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IG E I   +  + S+   L+ LD+ +  +   G   +A  I    ++  +NL  N + D
Sbjct: 306 IGGEDISQAL--ILSQVTVLSHLDLSSCQLGPIGGMRIANLIGTSSTITDVNLSDNKLDD 363

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           E +  +A+++    +I++++L  N I    AS +    + N  + SL L  N I     K
Sbjct: 364 EASASLANSILNGVSISSLNLSANEIGEWSASNLIEATQRNFRMMSLVLHGNKINRTVQK 423

Query: 462 ALSEVLK 468
            +  +L+
Sbjct: 424 KIDTLLE 430



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 7/273 (2%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSGNPIGD 232
            G EG   LA  L  N     +  + N I   G K    +++     L+ + L GN +G 
Sbjct: 161 LGPEGAALLARKLEKNTYLTSLDISLNEIGPGGAKPVAKLIEGPECVLECVQLYGNRLGP 220

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
           EGV  +   +  N  +++L L +    D  A  +A +L+ N+ L  L++  N +  +   
Sbjct: 221 EGVSEILAAVKKNRSIKQLTLGNNHATDAVAADLAAMLRENTSLERLDIRLNTLTAAAVR 280

Query: 293 SLAE-ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS--LRELHLHGNSIGD-EGIR 348
             A+  L +NS +RSL L GN   ++G   +++ L  ++   L  L L    +G   G+R
Sbjct: 281 VFAQDGLAQNSVLRSLCLAGNPLDSIGGEDISQALILSQVTVLSHLDLSSCQLGPIGGMR 340

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
             ++ L      +  +++ +N +  + +  +A  I N  S+  +NL  N+IG+  A  + 
Sbjct: 341 --IANLIGTSSTITDVNLSDNKLDDEASASLANSILNGVSISSLNLSANEIGEWSASNLI 398

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           +A ++N  + ++ L GN I+      I  +L++
Sbjct: 399 EATQRNFRMMSLVLHGNKINRTVQKKIDTLLEE 431


>gi|410060810|gb|AFV53357.1| nucleotide-binding oligomerization domain-containing protein 1
           [Epinephelus coioides]
          Length = 940

 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 4/261 (1%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++L   D+      A+  +L++   L  ++++NN I   G   L  +  + + +R   L+
Sbjct: 667 IKLGYCDVYSGDCTALNFVLQHRQKLLGVDMDNNNISDYGVKQLKPSFSKMTVVR---LS 723

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N         LA+ L  +K +  L L+ N I D G + L++ +     KL  + IG N 
Sbjct: 724 VNRLSDSSIEVLAEELCKHKIVEMLGLYNNEITDAGAK-LVARIIEECPKLRTVKIGKNK 782

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I++ G  ++A  I+   S+  + ++ N IGDEGAE  A+ALKQ+  +T + L  N I SK
Sbjct: 783 ITSVGGRYLASAIQKSTSIFDVGMWGNSIGDEGAEAFAEALKQHPRLTNLSLSANGITSK 842

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           G   +A  LK+NSV+    L  N +  D A  L+E+++ +  +  L L   Q    G + 
Sbjct: 843 GGKCLAEALKENSVLRIFWLVQNELTDDAAPHLAELVQANTGLLHLWLISNQFTVDGIKQ 902

Query: 491 VADMLRYNNTISILDLRANGL 511
           +A+ L +N  +  + ++ N L
Sbjct: 903 LAEALTHNTALKEICVKGNQL 923



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 7/243 (2%)

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
           Y G     AL   L+  + L  + +  N+I D G++ L    S    K+ V+ +  N +S
Sbjct: 675 YSG--DCTALNFVLQHRQKLLGVDMDNNNISDYGVKQLKPSFS----KMTVVRLSVNRLS 728

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
                 +AE +   K +  + LY N+I D GA+ +A  +++   + T+ +G N I S G 
Sbjct: 729 DSSIEVLAEELCKHKIVEMLGLYNNEITDAGAKLVARIIEECPKLRTVKIGKNKITSVGG 788

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
             +A  ++ ++ I  + +  N IG +GA+A +E LK H  +  L L    I + G + +A
Sbjct: 789 RYLASAIQKSTSIFDVGMWGNSIGDEGAEAFAEALKQHPRLTNLSLSANGITSKGGKCLA 848

Query: 493 DMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
           + L+ N+ + I  L  N L D+ A  LA+  +  N  L  + L  N+   DG   +A+AL
Sbjct: 849 EALKENSVLRIFWLVQNELTDDAAPHLAELVQ-ANTGLLHLWLISNQFTVDGIKQLAEAL 907

Query: 553 KAN 555
             N
Sbjct: 908 THN 910



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 16/263 (6%)

Query: 198 AANGITAAGIK------------AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
            A GITA  IK            A + VLQ    L  +++  N I D GVK    +    
Sbjct: 658 TAKGITANLIKLGYCDVYSGDCTALNFVLQHRQKLLGVDMDNNNISDYGVK---QLKPSF 714

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
           + +  ++LS   L D   + +AE L  + I+ +L L NN I  +G   +A  + E   +R
Sbjct: 715 SKMTVVRLSVNRLSDSSIEVLAEELCKHKIVEMLGLYNNEITDAGAKLVARIIEECPKLR 774

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
           ++ +  N   ++G   LA  ++ + S+ ++ + GNSIGDEG  A    L  +  +L  L 
Sbjct: 775 TVKIGKNKITSVGGRYLASAIQKSTSIFDVGMWGNSIGDEGAEAFAEAL-KQHPRLTNLS 833

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N I++KG   +AE +K    L    L  N++ D+ A  +A+ ++ N  +  + L  N
Sbjct: 834 LSANGITSKGGKCLAEALKENSVLRIFWLVQNELTDDAAPHLAELVQANTGLLHLWLISN 893

Query: 426 NIHSKGASAIARVLKDNSVITSL 448
                G   +A  L  N+ +  +
Sbjct: 894 QFTVDGIKQLAEALTHNTALKEI 916



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 3/199 (1%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           R S  ++   A+EL     V+M G       D G   +A  +        V    N IT+
Sbjct: 726 RLSDSSIEVLAEELCKHKIVEMLGLYNNEITDAGAKLVARIIEECPKLRTVKIGKNKITS 785

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +     +Q + ++  + + GN IGDEG +   + L  +  +  L LS+  +  +G K
Sbjct: 786 VGGRYLASAIQKSTSIFDVGMWGNSIGDEGAEAFAEALKQHPRLTNLSLSANGITSKGGK 845

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            +AE LK NS+LR+  L  N +       LAE +  N+ +  L L  N     G   LA+
Sbjct: 846 CLAEALKENSVLRIFWLVQNELTDDAAPHLAELVQANTGLLHLWLISNQFTVDGIKQLAE 905

Query: 325 GLEGNKSLRELHLHGNSIG 343
            L  N +L+E+ + GN + 
Sbjct: 906 ALTHNTALKEICVKGNQLS 924



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 92/205 (44%), Gaps = 4/205 (1%)

Query: 151 KQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF 210
           KQ    F+K     + V +S     D  +  LAE L  ++  E +    N IT AG K  
Sbjct: 708 KQLKPSFSK----MTVVRLSVNRLSDSSIEVLAEELCKHKIVEMLGLYNNEITDAGAKLV 763

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             +++    L+T+ +  N I   G + L   +  +  +  + +    + DEGA+A AE L
Sbjct: 764 ARIIEECPKLRTVKIGKNKITSVGGRYLASAIQKSTSIFDVGMWGNSIGDEGAEAFAEAL 823

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           K +  L  L L+ N I   G   LAEAL ENS +R   L  N      A  LA+ ++ N 
Sbjct: 824 KQHPRLTNLSLSANGITSKGGKCLAEALKENSVLRIFWLVQNELTDDAAPHLAELVQANT 883

Query: 331 SLRELHLHGNSIGDEGIRALMSGLS 355
            L  L L  N    +GI+ L   L+
Sbjct: 884 GLLHLWLISNQFTVDGIKQLAEALT 908


>gi|290985427|ref|XP_002675427.1| predicted protein [Naegleria gruberi]
 gi|284089023|gb|EFC42683.1| predicted protein [Naegleria gruberi]
          Length = 324

 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 188/366 (51%), Gaps = 53/366 (14%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L +L++SGN IGDE       ++ +   +  L +   ++ DE AK I+E+ +    L  L
Sbjct: 4   LTSLDISGNGIGDE-----AKLISEMKQLISLNIGKNEIGDEEAKLISEMKQ----LTSL 54

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            +++N+I   G    A+ + E   + SL++  N  G  GA  L++     K L  L++  
Sbjct: 55  NISDNLIGDEG----AKLISEMKQLTSLNICCNRIGVEGAKYLSE----MKQLISLNICE 106

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG +     L S   +L  L+IG   I  +GA  ++E     K L  +++  N I
Sbjct: 107 NEIGDEGAK-----LISETRQLTSLNIGFTQIGGEGAKFISEM----KQLTSLDISDNLI 157

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G EGA+ I++     + +T++++  N I  +GA  I+ + +    +TSL+++ N IG +G
Sbjct: 158 GVEGAKFISEM----KQLTSLNISDNLIGDEGAKLISEMKQ----LTSLNISNNQIGGEG 209

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
            K +SE+ +      +L +   QIG  GA+ +++M      ++ L++  N + DEGAK +
Sbjct: 210 VKLISEMKQL----TSLDISNNQIGDEGAKLISEM----KQLTSLNISGNRIGDEGAKSM 261

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALT 579
           ++      + L S+D+++N+I D+G   I++  +      + SLN+  N +   G   + 
Sbjct: 262 SEM-----KQLKSLDISYNQIGDEGTKLISEMKQ------LISLNIRANRIGDEGVKYIR 310

Query: 580 DAKDLV 585
           + K L 
Sbjct: 311 EMKQLT 316



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 173/364 (47%), Gaps = 82/364 (22%)

Query: 161 LRAFSSVDMSGRNFGDEGLF------FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           ++  +S+D+SG   GDE          ++ ++G N+  +E +           K    + 
Sbjct: 1   MKQLTSLDISGNGIGDEAKLISEMKQLISLNIGKNEIGDEEA-----------KLISEMK 49

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCD--------ILVDNAGVE------------RLQLS 254
           Q    L +LN+S N IGDEG K + +        I  +  GVE             L + 
Sbjct: 50  Q----LTSLNISDNLIGDEGAKLISEMKQLTSLNICCNRIGVEGAKYLSEMKQLISLNIC 105

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSL----AEALLENSTIRSLHLN 310
             ++ DEGAK I+E  +  S+        N+    GFT +    A+ + E   + SL ++
Sbjct: 106 ENEIGDEGAKLISETRQLTSL--------NI----GFTQIGGEGAKFISEMKQLTSLDIS 153

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  G  GA  +++     K L  L++  N IGDEG +     L S   +L  L+I NN 
Sbjct: 154 DNLIGVEGAKFISE----MKQLTSLNISDNLIGDEGAK-----LISEMKQLTSLNISNNQ 204

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           I  +G   ++E     K L  +++  N IGDEGA+ I++     + +T++++ GN I  +
Sbjct: 205 IGGEGVKLISEM----KQLTSLDISNNQIGDEGAKLISEM----KQLTSLNISGNRIGDE 256

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA +++ + +    + SLD++YN IG +G K +SE+ +      +L +   +IG  G ++
Sbjct: 257 GAKSMSEMKQ----LKSLDISYNQIGDEGTKLISEMKQLI----SLNIRANRIGDEGVKY 308

Query: 491 VADM 494
           + +M
Sbjct: 309 IREM 312



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 35/157 (22%)

Query: 131 SVGAGTNLLSGFTGKLFRESKQ--TLN-----------EFAKELRAFSSVDMSGRNFGDE 177
           S+    NL+     KL  E KQ  +LN           +   E++  +S+D+S    GDE
Sbjct: 173 SLNISDNLIGDEGAKLISEMKQLTSLNISNNQIGGEGVKLISEMKQLTSLDISNNQIGDE 232

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G   ++E     +    ++ + N I   G K+   + Q    LK+L++S N IGDEG K 
Sbjct: 233 GAKLISEM----KQLTSLNISGNRIGDEGAKSMSEMKQ----LKSLDISYNQIGDEGTKL 284

Query: 238 LCDILVDNAGVERLQLSSVDLR-----DEGAKAIAEL 269
           +          E  QL S+++R     DEG K I E+
Sbjct: 285 IS---------EMKQLISLNIRANRIGDEGVKYIREM 312


>gi|109462625|ref|XP_001072321.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14-like
           [Rattus norvegicus]
          Length = 994

 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 144/308 (46%), Gaps = 4/308 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEV-SFAANGITAAGIKAFDGVLQSNIALKTL 223
           + +D+   + GD G+  L E+L Y      V    +  +     +     LQSN +L  L
Sbjct: 634 THLDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRSLVFL 693

Query: 224 NLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           NLS N + ++GVK LC++L + N  +ERL L+S  L   G + ++  L     L  L L 
Sbjct: 694 NLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSALTKTKRLTHLCLA 753

Query: 283 NNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N+++  G   L+  L     T++SL L   Y   +G+  L+  L+ NKSL  L L  N 
Sbjct: 754 HNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDLGFNK 813

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           + D G++ L   L      L  L++    ++++    +A  + N  +L  ++L  N + D
Sbjct: 814 LADSGVKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLWNLDLGNNILDD 873

Query: 402 EGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            G   + +AL+  N  I  + L    +       +  +L +N  +  ++L  N +  +  
Sbjct: 874 AGLNILCEALRNPNCQIRRLGLENCGLTPGCCQDLLDLLSNNQSVIQMNLMKNSLDYEAI 933

Query: 461 KALSEVLK 468
           + L +VL+
Sbjct: 934 RNLCKVLR 941



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 142/307 (46%), Gaps = 6/307 (1%)

Query: 223 LNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           L+L    +GD GVK LC+ L      +  L+L S DL     + +++ L++N  L  L L
Sbjct: 636 LDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRSLVFLNL 695

Query: 282 NNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           + N +   G  SL E L   N  +  L L       +G   L+  L   K L  L L  N
Sbjct: 696 STNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSALTKTKRLTHLCLAHN 755

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            + DEGI  L   L   +  L  L +     +  G+ H++  ++N KSL+ ++L  N + 
Sbjct: 756 VLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDLGFNKLA 815

Query: 401 DEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           D G + +   L+Q N  +  ++L G  + S+    +A VL +NS + +LDL  N +   G
Sbjct: 816 DSGVKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLWNLDLGNNILDDAG 875

Query: 460 AKALSEVLKFHGNINTLKLGW--CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
              L E L+ + N    +LG   C +     + + D+L  N ++  ++L  N L  E  +
Sbjct: 876 LNILCEALR-NPNCQIRRLGLENCGLTPGCCQDLLDLLSNNQSVIQMNLMKNSLDYEAIR 934

Query: 518 CLAQSFK 524
            L +  +
Sbjct: 935 NLCKVLR 941



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 123/255 (48%), Gaps = 4/255 (1%)

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N ++  L L    +GD G++ L   L  +  KL VL + +  ++     ++++ +++ +S
Sbjct: 630 NNTVTHLDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRS 689

Query: 389 LLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           L+++NL  N + ++G + + + L+  N  +  + L    +   G   ++  L     +T 
Sbjct: 690 LVFLNLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSALTKTKRLTH 749

Query: 448 LDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
           L LA+N +  +G + LS  L+     + +L L  C     G+E ++  L+ N ++  LDL
Sbjct: 750 LCLAHNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDL 809

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
             N L D G K L Q+ +  N  L  ++L    +  +    +A  L  N ++   +L+L 
Sbjct: 810 GFNKLADSGVKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLW--NLDLG 867

Query: 567 NNFLTKFGQSALTDA 581
           NN L   G + L +A
Sbjct: 868 NNILDDAGLNILCEA 882



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 29/282 (10%)

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
           N  V  L L   DL D G K + E LK                Y G             +
Sbjct: 630 NNTVTHLDLKDTDLGDNGVKTLCEALK----------------YQG-----------CKL 662

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           R L L            L+K L+ N+SL  L+L  NS+ ++G+++L   L +    L  L
Sbjct: 663 RVLRLESCDLNVTHCQNLSKALQSNRSLVFLNLSTNSLSNDGVKSLCEVLENPNCPLERL 722

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR-TITTIDLG 423
            + +  ++  G   ++  +   K L  + L  N + DEG E ++  L+  R T+ ++ L 
Sbjct: 723 ALASCGLTKVGCEVLSSALTKTKRLTHLCLAHNVLEDEGIELLSYTLRHPRCTLQSLVLR 782

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQ 482
                  G+  ++  L++N  +  LDL +N +   G K L + L+  + N+  L+L  C 
Sbjct: 783 CCYFTPIGSEHLSTALQNNKSLIHLDLGFNKLADSGVKLLCQTLQQPNCNLQELELMGCV 842

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           + +     +A +L  N+ +  LDL  N L D G   L ++ +
Sbjct: 843 LTSEACGDLASVLVNNSNLWNLDLGNNILDDAGLNILCEALR 884



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 94/193 (48%), Gaps = 5/193 (2%)

Query: 176 DEGLFFLAESLGYNQ-TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           DEG+  L+ +L + + T + +       T  G +     LQ+N +L  L+L  N + D G
Sbjct: 759 DEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDLGFNKLADSG 818

Query: 235 VKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           VK LC  L   N  ++ L+L    L  E    +A +L NNS L  L+L NN++D +G   
Sbjct: 819 VKLLCQTLQQPNCNLQELELMGCVLTSEACGDLASVLVNNSNLWNLDLGNNILDDAGLNI 878

Query: 294 LAEALL-ENSTIRSLHLNGNYGGALGA-NALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           L EAL   N  IR L L  N G   G    L   L  N+S+ +++L  NS+  E IR L 
Sbjct: 879 LCEALRNPNCQIRRLGLE-NCGLTPGCCQDLLDLLSNNQSVIQMNLMKNSLDYEAIRNLC 937

Query: 352 SGLSSRKGKLAVL 364
             L S   K+  L
Sbjct: 938 KVLRSPTCKMEFL 950



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 34/181 (18%)

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           VL  N  +  +DL  + +     K L+E    H   N  K+ +  +    + +    L +
Sbjct: 571 VLHTNESLLEMDLYESRLDESLMKILNEEFS-HPKCNLQKVMFRAVCFLNSCYDFSFLAF 629

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKV----------------------------VNEA 529
           NNT++ LDL+   L D G K L ++ K                              N +
Sbjct: 630 NNTVTHLDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLESCDLNVTHCQNLSKALQSNRS 689

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG----QSALTDAKDLV 585
           L  ++L+ N + +DG  ++ + L+ N +  +  L LA+  LTK G     SALT  K L 
Sbjct: 690 LVFLNLSTNSLSNDGVKSLCEVLE-NPNCPLERLALASCGLTKVGCEVLSSALTKTKRLT 748

Query: 586 Y 586
           +
Sbjct: 749 H 749


>gi|355566745|gb|EHH23124.1| Nucleotide-binding oligomerization domain protein 5 [Macaca
           mulatta]
          Length = 1092

 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 152/319 (47%), Gaps = 6/319 (1%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAK 324
           +  +L  N  LR L+L ++ +D S    L + L   N  ++ L L        G   ++ 
Sbjct: 664 LCSVLHTNEHLRELDLCHSNLDKSAMNILHQELRHPNCKLQKLLLKC-ITFPDGCQDIST 722

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
            L  N++L  L L G+ IGD G+++L   L   + KL  L + + +++      +   + 
Sbjct: 723 SLIHNQNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLSIFNVLI 782

Query: 385 NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
             +SL+++NL  N++ D+G + + +AL+  +  +  + L    +       ++  L  N 
Sbjct: 783 RSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAACEDLSLALISNK 842

Query: 444 VITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            +T L LA N +G  G K +S+ L+     + +L L  C   +  +E+++  L +N +++
Sbjct: 843 RLTHLCLADNVLGDGGVKLMSDALQHAQCTLQSLVLRHCHFTSLSSEYLSTSLLHNKSLT 902

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            LDL +N L+D G K L   F+  +  L  ++L    + +     +A  +  N ++   S
Sbjct: 903 HLDLGSNWLQDNGMKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVIVYNPNLR--S 960

Query: 563 LNLANNFLTKFGQSALTDA 581
           L+L NN L   G   L DA
Sbjct: 961 LDLGNNNLQDDGVKILCDA 979



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 144/306 (47%), Gaps = 4/306 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD G+  L E+L + +   + +   +  +T     +   VL  + +L  LNL
Sbjct: 733  LDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLSIFNVLIRSQSLIFLNL 792

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GV+ LC+ L      +ERL L S  L +   + ++  L +N  L  L L +N
Sbjct: 793  STNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAACEDLSLALISNKRLTHLCLADN 852

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   +++AL     T++SL L   +  +L +  L+  L  NKSL  L L  N + 
Sbjct: 853  VLGDGGVKLMSDALQHAQCTLQSLVLRHCHFTSLSSEYLSTSLLHNKSLTHLDLGSNWLQ 912

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D G++ L          L  L++    ++      +A  I    +L  ++L  N++ D+G
Sbjct: 913  DNGMKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVIVYNPNLRSLDLGNNNLQDDG 972

Query: 404  AEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + DAL+  N  I  + L    + S     ++  L  N  +  ++L  N +G +G   
Sbjct: 973  VKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNQRLIKMNLTQNTLGYEGIMK 1032

Query: 463  LSEVLK 468
            L +VLK
Sbjct: 1033 LYKVLK 1038



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 167/363 (46%), Gaps = 7/363 (1%)

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELL 270
             VL +N  L+ L+L  + +    +  L   L   N  +++L L  +   D G + I+  L
Sbjct: 666  SVLHTNEHLRELDLCHSNLDKSAMNILHQELRHPNCKLQKLLLKCITFPD-GCQDISTSL 724

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN 329
             +N  L  L+L  + I  +G  SL EAL      +++L L           ++   L  +
Sbjct: 725  IHNQNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLSIFNVLIRS 784

Query: 330  KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
            +SL  L+L  N++ D+G++ L   L   K  L  L + +  ++      ++  + + K L
Sbjct: 785  QSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAACEDLSLALISNKRL 844

Query: 390  LWINLYMNDIGDEGAEKIADALKQNR-TITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              + L  N +GD G + ++DAL+  + T+ ++ L   +  S  +  ++  L  N  +T L
Sbjct: 845  THLCLADNVLGDGGVKLMSDALQHAQCTLQSLVLRHCHFTSLSSEYLSTSLLHNKSLTHL 904

Query: 449  DLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
            DL  N +  +G K L +V +    N+  L+L  C +  +    +A ++ YN  +  LDL 
Sbjct: 905  DLGSNWLQDNGMKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVIVYNPNLRSLDLG 964

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
             N L+D+G K L  + +  N  +  + L +  +       ++ AL  N+   +  +NL  
Sbjct: 965  NNNLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNQ--RLIKMNLTQ 1022

Query: 568  NFL 570
            N L
Sbjct: 1023 NTL 1025


>gi|399497902|emb|CCG20279.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E +  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEASSAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K  +   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLFQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTGVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  +  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TGVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++ G+ + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +     
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTG 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|338723261|ref|XP_001915323.2| PREDICTED: LOW QUALITY PROTEIN: nucleotide-binding oligomerization
           domain-containing protein 2-like [Equus caballus]
          Length = 1013

 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 5/224 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  NS+GD G+  L+  LS        L + +N+IS +G   + E   +C+ L  + L
Sbjct: 768 LQLDHNSVGDVGVEQLLPCLSV----CTALYLRDNNISDRGICQLIERALHCEQLQKLAL 823

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           + N + D  A  +A  L   +    + LG N+I + GA  +A+ L+ N+ +  L    N 
Sbjct: 824 FNNKLTDGCAHSMARLLMCKQNFLALRLGNNHITAAGAVVLAQGLRANTSLQFLGFWGNK 883

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G  GA+AL+E L  H ++  L L    IG++GA+ +A ML  N  +  L L  N L+DE
Sbjct: 884 VGDKGAQALAEALGNHPSLKWLSLVGNSIGSAGAQALAVMLEKNVALEELCLEENHLQDE 943

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           G   LA+  +  N +L  + L+ N I   GA A+ Q L+ N+ +
Sbjct: 944 GVCSLAEGLQ-RNSSLKVLKLSNNCITYRGAEALLQTLERNDTI 986



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 4/267 (1%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           V  L+L+   +      A+A +L++      L+L++N +   G   L   L   S   +L
Sbjct: 737 VGHLKLTFCSVGPAECAAMAFVLRHLRRPVALQLDHNSVGDVGVEQLLPCL---SVCTAL 793

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +L  N     G   L +     + L++L L  N + D G    M+ L   K     L +G
Sbjct: 794 YLRDNNISDRGICQLIERALHCEQLQKLALFNNKLTD-GCAHSMARLLMCKQNFLALRLG 852

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           NN I+A GA  +A+ ++   SL ++  + N +GD+GA+ +A+AL  + ++  + L GN+I
Sbjct: 853 NNHITAAGAVVLAQGLRANTSLQFLGFWGNKVGDKGAQALAEALGNHPSLKWLSLVGNSI 912

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            S GA A+A +L+ N  +  L L  N +  +G  +L+E L+ + ++  LKL    I   G
Sbjct: 913 GSAGAQALAVMLEKNVALEELCLEENHLQDEGVCSLAEGLQRNSSLKVLKLSNNCITYRG 972

Query: 488 AEFVADMLRYNNTISILDLRANGLRDE 514
           AE +   L  N+TI  + LR N    E
Sbjct: 973 AEALLQTLERNDTILEVWLRGNTFSPE 999



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 126/272 (46%), Gaps = 6/272 (2%)

Query: 194  EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +++F + G       AF  VL+       L L  N +GD GV+ L   L   +    L L
Sbjct: 741  KLTFCSVGPAECAAMAF--VLRHLRRPVALQLDHNSVGDVGVEQLLPCL---SVCTALYL 795

Query: 254  SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               ++ D G   + E   +   L+ L L NN +      S+A  L+      +L L  N+
Sbjct: 796  RDNNISDRGICQLIERALHCEQLQKLALFNNKLTDGCAHSMARLLMCKQNFLALRLGNNH 855

Query: 314  GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
              A GA  LA+GL  N SL+ L   GN +GD+G +AL   L +    L  L +  NSI +
Sbjct: 856  ITAAGAVVLAQGLRANTSLQFLGFWGNKVGDKGAQALAEALGNHPS-LKWLSLVGNSIGS 914

Query: 374  KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
             GA  +A  ++   +L  + L  N + DEG   +A+ L++N ++  + L  N I  +GA 
Sbjct: 915  AGAQALAVMLEKNVALEELCLEENHLQDEGVCSLAEGLQRNSSLKVLKLSNNCITYRGAE 974

Query: 434  AIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            A+ + L+ N  I  + L  N    +  + LS 
Sbjct: 975  ALLQTLERNDTILEVWLRGNTFSPEEIEKLSH 1006



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 79/149 (53%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           F ++ +   +    G   LA+ L  N + + + F  N +   G +A    L ++ +LK L
Sbjct: 846 FLALRLGNNHITAAGAVVLAQGLRANTSLQFLGFWGNKVGDKGAQALAEALGNHPSLKWL 905

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +L GN IG  G + L  +L  N  +E L L    L+DEG  ++AE L+ NS L+VL+L+N
Sbjct: 906 SLVGNSIGSAGAQALAVMLEKNVALEELCLEENHLQDEGVCSLAEGLQRNSSLKVLKLSN 965

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           N I Y G  +L + L  N TI  + L GN
Sbjct: 966 NCITYRGAEALLQTLERNDTILEVWLRGN 994



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 105/248 (42%), Gaps = 29/248 (11%)

Query: 161  LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
            L   +++ +   N  D G+  L E   + +  ++++   N +T     +   +L      
Sbjct: 787  LSVCTALYLRDNNISDRGICQLIERALHCEQLQKLALFNNKLTDGCAHSMARLLMCKQNF 846

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
              L L  N I   G   L   L  N  ++ L      + D+GA+A+AE L N+  L+ L 
Sbjct: 847  LALRLGNNHITAAGAVVLAQGLRANTSLQFLGFWGNKVGDKGAQALAEALGNHPSLKWLS 906

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L  N I                            G+ GA ALA  LE N +L EL L  N
Sbjct: 907  LVGNSI----------------------------GSAGAQALAVMLEKNVALEELCLEEN 938

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             + DEG+ +L  GL  R   L VL + NN I+ +GA  + + ++   ++L + L  N   
Sbjct: 939  HLQDEGVCSLAEGL-QRNSSLKVLKLSNNCITYRGAEALLQTLERNDTILEVWLRGNTFS 997

Query: 401  DEGAEKIA 408
             E  EK++
Sbjct: 998  PEEIEKLS 1005


>gi|348537652|ref|XP_003456307.1| PREDICTED: leucine-rich repeat-containing protein 34-like
           [Oreochromis niloticus]
          Length = 392

 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 157/319 (49%), Gaps = 27/319 (8%)

Query: 222 TLNLSGNP-----IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK-NNSI 275
           TL L GN      + D+ V  LC  L  N  V  L L    +++EG + +A+LL+   S 
Sbjct: 39  TLKLPGNVRQVQRLRDDDVLALCKCLRHNECVTGLDLRYNSIKNEGVEHLAKLLQEEKSS 98

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L+L  N I  +G   LA +L  N T+ SL L+GN  G  G   LA  L+ N +L+EL
Sbjct: 99  LSCLDLMFNDIQANGAQVLASSLQGNGTLLSLRLSGNKIGRGGGLELASMLQENCTLQEL 158

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN-- 393
            +    +    I AL+  L   K  L  +DI    + +    H  E+  +C  +L +N  
Sbjct: 159 EVADCDLDTSSIIALVIMLKKNKA-LCSVDISRPLLFS----HQEEWAVHCSKMLAVNSS 213

Query: 394 ---LYMNDIG--DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
              L++  +G  D G E++ + L +N ++  +DL  N +   GA  +A +LK N  +  L
Sbjct: 214 LMELHLGRMGMTDTGIEQLTEGLGRNHSLRYLDLCSNRVTRDGAFHLAMMLKQNRALEIL 273

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLK-LGWCQ--IGASGAEFVADMLRYNNTISILD 505
           DL+ N IG  GA  LS+V+       TLK L  C+  I + G   +A  ++ ++T++ + 
Sbjct: 274 DLSSNQIGDGGAGYLSKVITC--PCCTLKELSVCRNNIASEGLLLLAQAVKSSSTLTHIY 331

Query: 506 LRANGLRDEGAKCLAQSFK 524
           +  N L +     + Q+FK
Sbjct: 332 IWGNHLEEP----VCQAFK 346



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 135/265 (50%), Gaps = 10/265 (3%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           AL K L  N+ +  L L  NSI +EG+  L   L   K  L+ LD+  N I A GA  +A
Sbjct: 59  ALCKCLRHNECVTGLDLRYNSIKNEGVEHLAKLLQEEKSSLSCLDLMFNDIQANGAQVLA 118

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             ++   +LL + L  N IG  G  ++A  L++N T+  +++   ++ +    A+  +LK
Sbjct: 119 SSLQGNGTLLSLRLSGNKIGRGGGLELASMLQENCTLQELEVADCDLDTSSIIALVIMLK 178

Query: 441 DNSVITSLDLAYNPI----GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            N  + S+D++  P+      + A   S++L  + ++  L LG   +  +G E + + L 
Sbjct: 179 KNKALCSVDIS-RPLLFSHQEEWAVHCSKMLAVNSSLMELHLGRMGMTDTGIEQLTEGLG 237

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN- 555
            N+++  LDL +N +  +GA  LA   K  N AL  +DL+ N+I D GA  +++ +    
Sbjct: 238 RNHSLRYLDLCSNRVTRDGAFHLAMMLK-QNRALEILDLSSNQIGDGGAGYLSKVITCPC 296

Query: 556 ---EDVAVTSLNLANNFLTKFGQSA 577
              ++++V   N+A+  L    Q+ 
Sbjct: 297 CTLKELSVCRNNIASEGLLLLAQAV 321



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 7/311 (2%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALK 221
             + +D+   +  +EG+  LA+ L   +++   +    N I A G +     LQ N  L 
Sbjct: 69  CVTGLDLRYNSIKNEGVEHLAKLLQEEKSSLSCLDLMFNDIQANGAQVLASSLQGNGTLL 128

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           +L LSGN IG  G   L  +L +N  ++ L+++  DL      A+  +LK N  L  +++
Sbjct: 129 SLRLSGNKIGRGGGLELASMLQENCTLQELEVADCDLDTSSIIALVIMLKKNKALCSVDI 188

Query: 282 NNNMI---DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           +  ++           ++ L  NS++  LHL        G   L +GL  N SLR L L 
Sbjct: 189 SRPLLFSHQEEWAVHCSKMLAVNSSLMELHLGRMGMTDTGIEQLTEGLGRNHSLRYLDLC 248

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN-CKSLLWINLYMN 397
            N +  +G   L   L   +  L +LD+ +N I   GA ++++ I   C +L  +++  N
Sbjct: 249 SNRVTRDGAFHLAMMLKQNRA-LEILDLSSNQIGDGGAGYLSKVITCPCCTLKELSVCRN 307

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           +I  EG   +A A+K + T+T I + GN++      A   ++    +        +P   
Sbjct: 308 NIASEGLLLLAQAVKSSSTLTHIYIWGNHLEEPVCQAFKELISSGRLHPE-QTDVSPYEV 366

Query: 458 DGAKALSEVLK 468
           DG   L+EV +
Sbjct: 367 DGHVFLAEVFQ 377



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 9/185 (4%)

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK-DNSVITSLDLAYNPIGADG 459
           D+    +   L+ N  +T +DL  N+I ++G   +A++L+ + S ++ LDL +N I A+G
Sbjct: 54  DDDVLALCKCLRHNECVTGLDLRYNSIKNEGVEHLAKLLQEEKSSLSCLDLMFNDIQANG 113

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           A+ L+  L+ +G + +L+L   +IG  G   +A ML+ N T+  L++    L       L
Sbjct: 114 AQVLASSLQGNGTLLSLRLSGNKIGRGGGLELASMLQENCTLQELEVADCDLDTSSIIAL 173

Query: 520 AQSFKVVNEALTSID----LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
               K  N+AL S+D    L F+  +++ A   ++ L  N   ++  L+L    +T  G 
Sbjct: 174 VIMLK-KNKALCSVDISRPLLFSH-QEEWAVHCSKMLAVNS--SLMELHLGRMGMTDTGI 229

Query: 576 SALTD 580
             LT+
Sbjct: 230 EQLTE 234


>gi|399498112|emb|CCG20384.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALGKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   L   +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALGKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALGKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E +  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEASSAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K  +   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLFQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +AL     +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALGKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  +  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALGKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALGKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALG-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|335290294|ref|XP_003356132.1| PREDICTED: LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing
            protein 11-like [Sus scrofa]
          Length = 1119

 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 168/380 (44%), Gaps = 7/380 (1%)

Query: 193  EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERL 251
            + +S     + A+  +    +L  +  LK L LS NP+ +EGVK LC+ L+  +  +E L
Sbjct: 718  QHLSLMKCDLKASECQEIASLLIKSKNLKKLTLSNNPLKNEGVKILCNALLHPDCTLESL 777

Query: 252  QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS-TIRSLHLN 310
               S+       K +  +L  N  L  L+L++N +  +    +   L   S +++ L L 
Sbjct: 778  VCKSMS-PVRILKELVLVLHCNPNLTHLDLSSNNLGITVSMMIFRTLRHPSCSLKYLWLE 836

Query: 311  GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                 +   + L   L  N SL  L L  NS+ D  I+ L   L + K  L  L +   S
Sbjct: 837  SCGLTSEVCHQLFMELGKNTSLNFLSLGDNSLCDVEIKRLQGPLGTSKCPLKELSLEKCS 896

Query: 371  ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT-IDLGGNNIHS 429
            +       +A  + +   +  + L  N I D G + +  +L   + +   + L    + +
Sbjct: 897  LPVASCRDLALLLISTHRMTRLCLGFNQIQDAGVKLLCASLAHPKCLLERLVLWFCQLSA 956

Query: 430  KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGA 488
                 ++  L  N  +T L+L  N +G +G K L E L+    N+  L L  C     G 
Sbjct: 957  ASCRYLSNALLQNKRLTHLNLRKNNLGDEGVKFLCEPLRCPDCNLQDLNLSDCSFSVEGC 1016

Query: 489  EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
              +AD LR+N ++ ILDL  N +RD GAK L +  K VN AL ++ L    +  +    +
Sbjct: 1017 RELADALRHNQSLKILDLGENDVRDNGAKELCEVLKHVNYALKTLGLEKCNLTHNCCQHL 1076

Query: 549  AQALKANEDVAVTSLNLANN 568
               L+ N   ++  LNL  N
Sbjct: 1077 CSVLRNNR--SLVHLNLLGN 1094



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 136/309 (44%), Gaps = 4/309 (1%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +D+S  N G      +  +L +   + + +   + G+T+         L  N +L  
Sbjct: 801  LTHLDLSSNNLGITVSMMIFRTLRHPSCSLKYLWLESCGLTSEVCHQLFMELGKNTSLNF 860

Query: 223  LNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L+L  N + D  +K L   L      ++ L L    L     + +A LL +   +  L L
Sbjct: 861  LSLGDNSLCDVEIKRLQGPLGTSKCPLKELSLEKCSLPVASCRDLALLLISTHRMTRLCL 920

Query: 282  NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
              N I  +G   L  +L      +  L L      A     L+  L  NK L  L+L  N
Sbjct: 921  GFNQIQDAGVKLLCASLAHPKCLLERLVLWFCQLSAASCRYLSNALLQNKRLTHLNLRKN 980

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            ++GDEG++ L   L      L  L++ + S S +G   +A+ +++ +SL  ++L  ND+ 
Sbjct: 981  NLGDEGVKFLCEPLRCPDCNLQDLNLSDCSFSVEGCRELADALRHNQSLKILDLGENDVR 1040

Query: 401  DEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            D GA+++ + LK  N  + T+ L   N+       +  VL++N  +  L+L  N +G DG
Sbjct: 1041 DNGAKELCEVLKHVNYALKTLGLEKCNLTHNCCQHLCSVLRNNRSLVHLNLLGNDLGPDG 1100

Query: 460  AKALSEVLK 468
               L   LK
Sbjct: 1101 VNRLWTSLK 1109



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 3/192 (1%)

Query: 176  DEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
            D G+  L  SL + +   E +      ++AA  +     L  N  L  LNL  N +GDEG
Sbjct: 927  DAGVKLLCASLAHPKCLLERLVLWFCQLSAASCRYLSNALLQNKRLTHLNLRKNNLGDEG 986

Query: 235  VKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
            VK LC+ L   +  ++ L LS      EG + +A+ L++N  L++L+L  N +  +G   
Sbjct: 987  VKFLCEPLRCPDCNLQDLNLSDCSFSVEGCRELADALRHNQSLKILDLGENDVRDNGAKE 1046

Query: 294  LAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            L E L   N  +++L L            L   L  N+SL  L+L GN +G +G+  L +
Sbjct: 1047 LCEVLKHVNYALKTLGLEKCNLTHNCCQHLCSVLRNNRSLVHLNLLGNDLGPDGVNRLWT 1106

Query: 353  GLSSRKGKLAVL 364
             L     +L  L
Sbjct: 1107 SLKKSTCQLQKL 1118



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 2/224 (0%)

Query: 193  EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERL 251
            +E+S     +  A  +    +L S   +  L L  N I D GVK LC  L      +ERL
Sbjct: 888  KELSLEKCSLPVASCRDLALLLISTHRMTRLCLGFNQIQDAGVKLLCASLAHPKCLLERL 947

Query: 252  QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLN 310
             L    L     + ++  L  N  L  L L  N +   G   L E L   +  ++ L+L+
Sbjct: 948  VLWFCQLSAASCRYLSNALLQNKRLTHLNLRKNNLGDEGVKFLCEPLRCPDCNLQDLNLS 1007

Query: 311  GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
                   G   LA  L  N+SL+ L L  N + D G + L   L      L  L +   +
Sbjct: 1008 DCSFSVEGCRELADALRHNQSLKILDLGENDVRDNGAKELCEVLKHVNYALKTLGLEKCN 1067

Query: 371  ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
            ++     H+   ++N +SL+ +NL  ND+G +G  ++  +LK++
Sbjct: 1068 LTHNCCQHLCSVLRNNRSLVHLNLLGNDLGPDGVNRLWTSLKKS 1111



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 5/263 (1%)

Query: 186  LGYNQTAEEVSFAANGITAAGIKAFDGVL-QSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
            LG N +   +S   N +    IK   G L  S   LK L+L    +     + L  +L+ 
Sbjct: 852  LGKNTSLNFLSLGDNSLCDVEIKRLQGPLGTSKCPLKELSLEKCSLPVASCRDLALLLIS 911

Query: 245  NAGVERLQLSSVDLRDEGAKAI-AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
               + RL L    ++D G K + A L     +L  L L    +  +    L+ ALL+N  
Sbjct: 912  THRMTRLCLGFNQIQDAGVKLLCASLAHPKCLLERLVLWFCQLSAASCRYLSNALLQNKR 971

Query: 304  IRSLHLNGNYGGALGANALAKGLEG-NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            +  L+L  N  G  G   L + L   + +L++L+L   S   EG R L   L   +  L 
Sbjct: 972  LTHLNLRKNNLGDEGVKFLCEPLRCPDCNLQDLNLSDCSFSVEGCRELADALRHNQS-LK 1030

Query: 363  VLDIGNNSISAKGAFHVAEYIKNCK-SLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
            +LD+G N +   GA  + E +K+   +L  + L   ++     + +   L+ NR++  ++
Sbjct: 1031 ILDLGENDVRDNGAKELCEVLKHVNYALKTLGLEKCNLTHNCCQHLCSVLRNNRSLVHLN 1090

Query: 422  LGGNNIHSKGASAIARVLKDNSV 444
            L GN++   G + +   LK ++ 
Sbjct: 1091 LLGNDLGPDGVNRLWTSLKKSTC 1113



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 28/167 (16%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            +  + +++   N GDEG+ FL E L                     +  D  LQ      
Sbjct: 970  KRLTHLNLRKNNLGDEGVKFLCEPL---------------------RCPDCNLQD----- 1003

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN-NSILRVLE 280
             LNLS      EG + L D L  N  ++ L L   D+RD GAK + E+LK+ N  L+ L 
Sbjct: 1004 -LNLSDCSFSVEGCRELADALRHNQSLKILDLGENDVRDNGAKELCEVLKHVNYALKTLG 1062

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
            L    + ++    L   L  N ++  L+L GN  G  G N L   L+
Sbjct: 1063 LEKCNLTHNCCQHLCSVLRNNRSLVHLNLLGNDLGPDGVNRLWTSLK 1109



 Score = 42.0 bits (97), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 1/112 (0%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS-NIALKT 222
               +++S  +F  EG   LA++L +NQ+ + +    N +   G K    VL+  N ALKT
Sbjct: 1001 LQDLNLSDCSFSVEGCRELADALRHNQSLKILDLGENDVRDNGAKELCEVLKHVNYALKT 1060

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
            L L    +     + LC +L +N  +  L L   DL  +G   +   LK ++
Sbjct: 1061 LGLEKCNLTHNCCQHLCSVLRNNRSLVHLNLLGNDLGPDGVNRLWTSLKKST 1112


>gi|157412336|ref|NP_001098710.1| nucleotide-binding oligomerization domain-containing protein 2 [Pan
            troglodytes]
 gi|68565100|sp|Q53B87.1|NOD2_PANTR RecName: Full=Nucleotide-binding oligomerization domain-containing
            protein 2; AltName: Full=Caspase recruitment
            domain-containing protein 15
 gi|46370448|gb|AAS89991.1| caspase activation and recruitment domain protein family member 15
            [Pan troglodytes]
          Length = 1040

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 122/238 (51%), Gaps = 5/238 (2%)

Query: 321  ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +G   + 
Sbjct: 781  ALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDRGICKLI 836

Query: 381  EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
            E   +C+ L  + L+ N + D  A  +A  L   +    + LG N I + GA  +A+ L+
Sbjct: 837  ECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITAAGAQVLAQGLR 896

Query: 441  DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
             N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A ML  N  
Sbjct: 897  GNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVM 956

Query: 501  ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            +  L L  N L+DEG   LA+  K  N +L  + L+ N I   GA A+ QAL+ N+ +
Sbjct: 957  LEELCLEENHLQDEGVCSLAEGLK-KNSSLKILKLSNNCITYLGAEALLQALERNDTI 1013



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 764  VGHLKLTFCSVGPAECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 820

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 821  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 879

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +A+ ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 880  NNYITAAGAQVLAQGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 939

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    I   G
Sbjct: 940  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 999

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            AE +   L  N+TI  + LR N
Sbjct: 1000 AEALLQALERNDTILEVWLRGN 1021



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 863  MAKLLACRQNFLALRLGNNYITAAGAQVLAQGLRGNTSLQFLGFWGNRVGDEGAQALAEA 922

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L +N
Sbjct: 923  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 982

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +  L
Sbjct: 983  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 1031



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL        L 
Sbjct: 818  KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALR 877

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G   LA+ L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 878  LGNNYITAAGAQVLAQGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 937

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +IG  G +AL   L ++   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 938  NIGSVGAQALALML-AKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCIT 996

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNI 427
              GAE +  AL++N TI  + L GN  
Sbjct: 997  YLGAEALLQALERNDTILEVWLRGNTF 1023



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 86/197 (43%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 826  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITA 885

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L   L  N  ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 886  AGAQVLAQGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 945

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N I   G  AL+ 
Sbjct: 946  ALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQ 1005

Query: 353  GLSSRKGKLAVLDIGNN 369
             L      L V   GN 
Sbjct: 1006 ALERNDTILEVWLRGNT 1022


>gi|156392108|ref|XP_001635891.1| predicted protein [Nematostella vectensis]
 gi|156222989|gb|EDO43828.1| predicted protein [Nematostella vectensis]
          Length = 447

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 1/205 (0%)

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LA+A+    T++  HL+ +         L   L  + SL  L L  N IGD G RA+   
Sbjct: 235 LAKAVKACHTLKVFHLHRSQVDDEKVRVLVSHLLDHPSLITLDLSHNKIGDSGARAIGKL 294

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L+ R  KL +L++ +N I + GA  +   +     L  IN+ +N +GD+G + I  AL +
Sbjct: 295 LNGR-CKLTILNLCDNKIRSNGAAAIGHALGKNTILKNINIRLNRLGDDGGQAICRALLK 353

Query: 414 NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           N T+T + LGGN++    A+ +A+VL  N V+  L+L+ N IG DG K+L E ++ + +I
Sbjct: 354 NETLTHVHLGGNDLGEPTAAILAQVLVANKVLVELNLSCNKIGPDGGKSLQEGMEENSSI 413

Query: 474 NTLKLGWCQIGASGAEFVADMLRYN 498
             + L   ++G      +  +L+ N
Sbjct: 414 LLMDLRLTEVGQESEYCINQLLKRN 438



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 1/197 (0%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            LK  +L  + + DE V+ L   L+D+  +  L LS   + D GA+AI +LL     L +
Sbjct: 244 TLKVFHLHRSQVDDEKVRVLVSHLLDHPSLITLDLSHNKIGDSGARAIGKLLNGRCKLTI 303

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L +N I  +G  ++  AL +N+ ++++++  N  G  G  A+ + L  N++L  +HL 
Sbjct: 304 LNLCDNKIRSNGAAAIGHALGKNTILKNINIRLNRLGDDGGQAICRALLKNETLTHVHLG 363

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
           GN +G E   A+++ +      L  L++  N I   G   + E ++   S+L ++L + +
Sbjct: 364 GNDLG-EPTAAILAQVLVANKVLVELNLSCNKIGPDGGKSLQEGMEENSSILLMDLRLTE 422

Query: 399 IGDEGAEKIADALKQNR 415
           +G E    I   LK+NR
Sbjct: 423 VGQESEYCINQLLKRNR 439



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 6/206 (2%)

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
           + +    +A+ +K C +L   +L+ + + DE    +   L  + ++ T+DL  N I   G
Sbjct: 228 TTRDCLLLAKAVKACHTLKVFHLHRSQVDDEKVRVLVSHLLDHPSLITLDLSHNKIGDSG 287

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A AI ++L     +T L+L  N I ++GA A+   L  +  +  + +   ++G  G + +
Sbjct: 288 ARAIGKLLNGRCKLTILNLCDNKIRSNGAAAIGHALGKNTILKNINIRLNRLGDDGGQAI 347

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
              L  N T++ + L  N L +  A  LAQ   V N+ L  ++L+ N+I  DG  ++ + 
Sbjct: 348 CRALLKNETLTHVHLGGNDLGEPTAAILAQVL-VANKVLVELNLSCNKIGPDGGKSLQEG 406

Query: 552 LKANEDVAVTSLNLANNFLTKFGQSA 577
           ++ N  + +  L      LT+ GQ +
Sbjct: 407 MEENSSILLMDLR-----LTEVGQES 427



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 67/139 (48%)

Query: 166 SVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           ++D+S    GD G   + + L        ++   N I + G  A    L  N  LK +N+
Sbjct: 275 TLDLSHNKIGDSGARAIGKLLNGRCKLTILNLCDNKIRSNGAAAIGHALGKNTILKNINI 334

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             N +GD+G + +C  L+ N  +  + L   DL +  A  +A++L  N +L  L L+ N 
Sbjct: 335 RLNRLGDDGGQAICRALLKNETLTHVHLGGNDLGEPTAAILAQVLVANKVLVELNLSCNK 394

Query: 286 IDYSGFTSLAEALLENSTI 304
           I   G  SL E + ENS+I
Sbjct: 395 IGPDGGKSLQEGMEENSSI 413



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 28/200 (14%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
           F       LA+++    T +      + +    ++     L  + +L TL+LS N IGD 
Sbjct: 227 FTTRDCLLLAKAVKACHTLKVFHLHRSQVDDEKVRVLVSHLLDHPSLITLDLSHNKIGDS 286

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + +  +L     +  L L    +R  GA AI   L  N+IL+ + +  N +   G  +
Sbjct: 287 GARAIGKLLNGRCKLTILNLCDNKIRSNGAAAIGHALGKNTILKNINIRLNRLGDDGGQA 346

Query: 294 LAEALLENSTIRSLHLNGN----------------------------YGGALGANALAKG 325
           +  ALL+N T+  +HL GN                              G  G  +L +G
Sbjct: 347 ICRALLKNETLTHVHLGGNDLGEPTAAILAQVLVANKVLVELNLSCNKIGPDGGKSLQEG 406

Query: 326 LEGNKSLRELHLHGNSIGDE 345
           +E N S+  + L    +G E
Sbjct: 407 MEENSSILLMDLRLTEVGQE 426



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 50/110 (45%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
             ++++     GD+G   +  +L  N+T   V    N +          VL +N  L  L
Sbjct: 329 LKNINIRLNRLGDDGGQAICRALLKNETLTHVHLGGNDLGEPTAAILAQVLVANKVLVEL 388

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           NLS N IG +G K L + + +N+ +  + L   ++  E    I +LLK N
Sbjct: 389 NLSCNKIGPDGGKSLQEGMEENSSILLMDLRLTEVGQESEYCINQLLKRN 438


>gi|355707544|gb|AES02988.1| nucleotide-binding oligomerization domain containing 1 [Mustela
           putorius furo]
          Length = 261

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 5/219 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S    +L V+ +  N I+  G   + E +   K L ++ LY N I D GA 
Sbjct: 28  GVRELQPCFS----RLTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGAR 83

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA  L + + +T + LG N I S+G   +A  +K++  I  + +  N IG +GAKA +E
Sbjct: 84  YIARILDECKGLTHLKLGENKITSEGGKCLAVAVKNSKSIFEIGMWGNRIGDEGAKAFAE 143

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I   G + +A  L  N ++ I  L  N L DE A+ LA+  K 
Sbjct: 144 ALRNHPSLTNLSLAFNGISREGGKSLAQALEQNTSLRIFWLTKNELDDEVAESLAEMLK- 202

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
           VN+ L  + L  N+I   G   +A AL+ N  +    LN
Sbjct: 203 VNQTLKHLWLIQNQITAKGIAQLADALQRNTGIMEICLN 241



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K L  L L+ N I D G R +   L   KG L  L +G N I+++G  
Sbjct: 53  GVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKG-LTHLKLGENKITSEGGK 111

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  I ++ N IGDEGA+  A+AL+ + ++T + L  N I  +G  ++A+
Sbjct: 112 CLAVAVKNSKSIFEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISREGGKSLAQ 171

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++L+E+LK +  +  L L   QI A G   +AD L+ 
Sbjct: 172 ALEQNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQR 231

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I  + L  N ++ E AK      +++
Sbjct: 232 NTGIMEICLNGNLIKPEEAKVFEDEKRII 260



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 108/246 (43%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK L                             E L    IL  L
Sbjct: 39  LTVIRLSVNQITDSGVKVL----------------------------YEELTKYKILTFL 70

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L NN I   G   +A  L E   +  L L  N   + G   LA  ++ +KS+ E+ + G
Sbjct: 71  GLYNNQITDVGARYIARILDECKGLTHLKLGENKITSEGGKCLAVAVKNSKSIFEIGMWG 130

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG +A    L +    L  L +  N IS +G   +A+ ++   SL    L  N++
Sbjct: 131 NRIGDEGAKAFAEALRNHPS-LTNLSLAFNGISREGGKSLAQALEQNTSLRIFWLTKNEL 189

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I +KG + +A  L+ N+ I  + L  N I  + 
Sbjct: 190 DDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQRNTGIMEICLNGNLIKPEE 249

Query: 460 AKALSE 465
           AK   +
Sbjct: 250 AKVFED 255



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 94/205 (45%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + + +S     D G+  L E L   +    +    N IT  G +    +L     L  L
Sbjct: 39  LTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHL 98

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            L  N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L  
Sbjct: 99  KLGENKITSEGGKCLAVAVKNSKSIFEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAF 158

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N I   G  SLA+AL +N+++R   L  N      A +LA+ L+ N++L+ L L  N I 
Sbjct: 159 NGISREGGKSLAQALEQNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQIT 218

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGN 368
            +GI  L   L    G + +   GN
Sbjct: 219 AKGIAQLADALQRNTGIMEICLNGN 243



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 93/194 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L E   + +  + + +      D G  ++A  L   +    +    N IT+ G K   
Sbjct: 55  KVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGENKITSEGGKCLA 114

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN IGDEG K   + L ++  +  L L+   +  EG K++A+ L+
Sbjct: 115 VAVKNSKSIFEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISREGGKSLAQALE 174

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ LR+  L  N +D     SLAE L  N T++ L L  N   A G   LA  L+ N  
Sbjct: 175 QNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQRNTG 234

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 235 IMEICLNGNLIKPE 248



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++   + M G   GDEG    AE+L  + +   +S A NGI+ 
Sbjct: 104 KITSEGGKCLAVAVKNSKSIFEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISR 163

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    L+ N +L+   L+ N                            +L DE A+
Sbjct: 164 EGGKSLAQALEQNTSLRIFWLTKN----------------------------ELDDEVAE 195

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   LA+AL  N+ I  + LNGN
Sbjct: 196 SLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQRNTGIMEICLNGN 243



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 136 TNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           TNL   F G + RE  ++L +  ++  +     ++     DE    LAE L  NQT + +
Sbjct: 152 TNLSLAFNG-ISREGGKSLAQALEQNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHL 210

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
               N ITA GI      LQ N  +  + L+GN I  E  K   D
Sbjct: 211 WLIQNQITAKGIAQLADALQRNTGIMEICLNGNLIKPEEAKVFED 255


>gi|326432350|gb|EGD77920.1| hypothetical protein PTSG_12898 [Salpingoeca sp. ATCC 50818]
          Length = 1415

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 99/193 (51%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           ++   ++++    GD G   +  SL  N    E+    N +     +A    L+ N AL+
Sbjct: 560 KSLEILELNNNQIGDSGGRAICASLAGNTALRELDLRGNRLRGDAGRALGTALKENRALR 619

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNL GN +G +G + + + LV N  + +L L    + DE  +AI   LK+N  L  L L
Sbjct: 620 KLNLKGNRLGPQGGRAVGEGLVTNLALHKLILDDNLIGDEAGQAIGNALKHNMSLAKLHL 679

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            NN +      ++ EALL N+ +R LHL+ N  G +G +AL +GL+ N S+  L LH + 
Sbjct: 680 KNNRLGELAGYAIGEALLRNTILRELHLDNNRLGDVGGHALGEGLQRNTSIHILGLHNSG 739

Query: 342 IGDEGIRALMSGL 354
            G  G+  L +GL
Sbjct: 740 FGARGLEGLAAGL 752



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 131/275 (47%), Gaps = 6/275 (2%)

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
           Q+ S  ++D+    I EL K  +   +++L NN I   G T+LA+ L  N+ +R L L+ 
Sbjct: 487 QIKSKRVQDQ----IMELWKGTNPT-LVDLCNNRISDMGATALADMLNTNTHLRELRLHD 541

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N  G  GA A+A+ L  NKSL  L L+ N IGD G RA+ + L+     L  LD+  N +
Sbjct: 542 NRIGDFGATAIAEMLASNKSLEILELNNNQIGDSGGRAICASLAGNTA-LRELDLRGNRL 600

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
                  +   +K  ++L  +NL  N +G +G   + + L  N  +  + L  N I  + 
Sbjct: 601 RGDAGRALGTALKENRALRKLNLKGNRLGPQGGRAVGEGLVTNLALHKLILDDNLIGDEA 660

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
             AI   LK N  +  L L  N +G     A+ E L  +  +  L L   ++G  G   +
Sbjct: 661 GQAIGNALKHNMSLAKLHLKNNRLGELAGYAIGEALLRNTILRELHLDNNRLGDVGGHAL 720

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVV 526
            + L+ N +I IL L  +G    G + LA   + V
Sbjct: 721 GEGLQRNTSIHILGLHNSGFGARGLEGLAAGLEDV 755



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 114/258 (44%), Gaps = 5/258 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           VD+      D G   LA+ L  N    E+    N I   G  A   +L SN +L+ L L+
Sbjct: 509 VDLCNNRISDMGATALADMLNTNTHLRELRLHDNRIGDFGATAIAEMLASNKSLEILELN 568

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD G + +C  L  N  +  L L    LR +  +A+   LK N  LR L L  N +
Sbjct: 569 NNQIGDSGGRAICASLAGNTALRELDLRGNRLRGDAGRALGTALKENRALRKLNLKGNRL 628

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  ++ E L+ N  +  L L+ N  G     A+   L+ N SL +LHL  N +G+  
Sbjct: 629 GPQGGRAVGEGLVTNLALHKLILDDNLIGDEAGQAIGNALKHNMSLAKLHLKNNRLGELA 688

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             A+   L  R   L  L + NN +   G   + E ++   S+  + L+ +  G  G E 
Sbjct: 689 GYAIGEAL-LRNTILRELHLDNNRLGDVGGHALGEGLQRNTSIHILGLHNSGFGARGLEG 747

Query: 407 IA----DALKQNRTITTI 420
           +A    D   Q RTI  +
Sbjct: 748 LAAGLEDVFSQRRTIAKL 765



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 105/221 (47%), Gaps = 7/221 (3%)

Query: 155 NEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           N   +ELR      +     GD G   +AE L  N++ E +    N I  +G +A    L
Sbjct: 531 NTHLRELR------LHDNRIGDFGATAIAEMLASNKSLEILELNNNQIGDSGGRAICASL 584

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
             N AL+ L+L GN +  +  + L   L +N  + +L L    L  +G +A+ E L  N 
Sbjct: 585 AGNTALRELDLRGNRLRGDAGRALGTALKENRALRKLNLKGNRLGPQGGRAVGEGLVTNL 644

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L L++N+I      ++  AL  N ++  LHL  N  G L   A+ + L  N  LRE
Sbjct: 645 ALHKLILDDNLIGDEAGQAIGNALKHNMSLAKLHLKNNRLGELAGYAIGEALLRNTILRE 704

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
           LHL  N +GD G  AL  GL  R   + +L + N+   A+G
Sbjct: 705 LHLDNNRLGDVGGHALGEGL-QRNTSIHILGLHNSGFGARG 744



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 3/216 (1%)

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
           ++D+ NN IS  GA  +A+ +     L  + L+ N IGD GA  IA+ L  N+++  ++L
Sbjct: 508 LVDLCNNRISDMGATALADMLNTNTHLRELRLHDNRIGDFGATAIAEMLASNKSLEILEL 567

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             N I   G  AI   L  N+ +  LDL  N +  D  +AL   LK +  +  L L   +
Sbjct: 568 NNNQIGDSGGRAICASLAGNTALRELDLRGNRLRGDAGRALGTALKENRALRKLNLKGNR 627

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G  G   V + L  N  +  L L  N + DE  + +  + K  N +L  + L  N + +
Sbjct: 628 LGPQGGRAVGEGLVTNLALHKLILDDNLIGDEAGQAIGNALK-HNMSLAKLHLKNNRLGE 686

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
              +AI +AL  N    +  L+L NN L   G  AL
Sbjct: 687 LAGYAIGEALLRN--TILRELHLDNNRLGDVGGHAL 720


>gi|410050357|ref|XP_003952898.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC5 [Pan troglodytes]
          Length = 1864

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 22/346 (6%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            KT  L+ + +  EG+  L   L     +E L+         G KA+   L+   +L+ L+
Sbjct: 1503 KTFRLTSSCVSTEGLAHLASGLGHCHHLEELE--------SGTKALMSALEGKWMLKRLD 1554

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L++ +++ S    L   L   + ++SL LN N  G +G   L++ L    SL EL L  N
Sbjct: 1555 LSHLLLNSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1614

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
             IGD G++ L + L     +L  +D+  NSIS+ G   +AE +  C+ L  + L  N +G
Sbjct: 1615 QIGDAGVQHLATILPGLP-ELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNALG 1673

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D  A  +A  L Q+  +  + L  +++   GA ++A+ L  +  +  + LA N +     
Sbjct: 1674 DPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGG-- 1729

Query: 461  KALSEVLKFHGNINTLK---LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
                 VL+F   +  L+   L  C+I    A+ +         + ++ L  N L DE A 
Sbjct: 1730 -----VLRFCKELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAA 1784

Query: 518  CLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
             LAQ    +   L  +DL  N+I   GA+ +A+ L     + V  L
Sbjct: 1785 ELAQVLPQMGR-LKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRL 1829



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 7/297 (2%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
            +D+S        L  L   L +    + +    N I   G       L++  +L+ L+LS
Sbjct: 1553 LDLSHLLLNSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLS 1612

Query: 227  GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
             N IGD GV+ L  IL     + ++ LS   +   G   +AE L     L  L L  N +
Sbjct: 1613 HNQIGDAGVQHLATILPGLPELRKIDLSVNSISSAGGVQLAESLVLCRRLEELMLGCNAL 1672

Query: 287  DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
                   LA+ L ++  +R LHL  ++ G  GA +LA+ L+G+  L E+ L  N++    
Sbjct: 1673 GDPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNLAGGV 1730

Query: 347  IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            +R            L  +D+ +  I  + A  +     +C +L  I L  N +GDE A +
Sbjct: 1731 LR-----FCKELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAE 1785

Query: 407  IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
            +A  L Q   +  +DL  N I + GA  +A  L   S I  + L  NPI  D  + L
Sbjct: 1786 LAQVLPQMGRLKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRLWNNPIPCDMVQHL 1842



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 13/216 (6%)

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++ +S +G  H+A  + +C  L  +        + G + +  AL+    +  +DL    +
Sbjct: 1509 SSCVSTEGLAHLASGLGHCHHLEEL--------ESGTKALMSALEGKWMLKRLDLSHLLL 1560

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +S   + +   L   + + SL L  N IG  G   LSE L+   ++  L L   QIG +G
Sbjct: 1561 NSSTLALLTHRLSHMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAG 1620

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
             + +A +L     +  +DL  N +   G   LA+S  V+   L  + L  N + D  A  
Sbjct: 1621 VQHLATILPGLPELRKIDLSVNSISSAGGVQLAESL-VLCRRLEELMLGCNALGDPTALG 1679

Query: 548  IAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
            +AQ L  +  V    L+L  + L   G  +L  A D
Sbjct: 1680 LAQELPQHLRV----LHLPFSHLGPGGALSLAQALD 1711



 Score = 51.2 bits (121), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 18/247 (7%)

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           + L G   +  L       GD    AL   L +  G+L +L +  + I+A+G  H+ + +
Sbjct: 680 EALVGCGQIENLSFRSRKCGDTFAEALSRSLPTM-GRLQMLGLAGSKITARGISHLVKAL 738

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
             C  L  ++   N + D+    I + L     +  +DL  N+I       +ARV     
Sbjct: 739 PLCPQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCP 798

Query: 444 VITSL-----DLAY--NPIGADGA--KALSEVLKFHGNIN-------TLKLGWCQIGASG 487
            +  L     DL +  +P     A  +  S++ +  G          TL+L  CQ+    
Sbjct: 799 TVRMLQAREADLIFLLSPPTETTAELQRSSDLQESDGQRKGAQSRSLTLRLQKCQLQVHD 858

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFA 547
           AE +  +L+    +  +DL  N L DEG + +A++   ++ A   +DL+ N +   G   
Sbjct: 859 AEALIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIA-RKLDLSDNGLSVAGVHC 917

Query: 548 IAQALKA 554
           + +A+ A
Sbjct: 918 VLRAVSA 924



 Score = 41.2 bits (95), Expect = 1.5,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 88/241 (36%), Gaps = 45/241 (18%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           E +SF +        +A    L +   L+ L L+G+ I   G+  L   L     ++ + 
Sbjct: 689 ENLSFRSRKCGDTFAEALSRSLPTMGRLQMLGLAGSKITARGISHLVKALPLCPQLKEVS 748

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL--- 309
                L D+    I E+L +   LR L+L++N I  S    LA   +   T+R L     
Sbjct: 749 FRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCPTVRMLQAREA 808

Query: 310 -------------------------NGNYGGALG----------------ANALAKGLEG 328
                                    +G   GA                  A AL   L+ 
Sbjct: 809 DLIFLLSPPTETTAELQRSSDLQESDGQRKGAQSRSLTLRLQKCQLQVHDAEALIALLQE 868

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
              L E+ L GN + DEG R LM+  +S+      LD+ +N +S  G   V   +  C +
Sbjct: 869 GPHLEEVDLSGNQLEDEGCR-LMAEAASQLHIARKLDLSDNGLSVAGVHCVLRAVSACWT 927

Query: 389 L 389
           L
Sbjct: 928 L 928


>gi|14488149|emb|CAC42117.1| LRR-containing protein [Homo sapiens]
          Length = 1013

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 122/244 (50%), Gaps = 5/244 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 748 GPTECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 803

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N I + GA  
Sbjct: 804 GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITAAGAQV 863

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 864 LAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 923

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L  N  +  L L  N L+DEG   LA+  K  N +L  + L+ N I   GA A+ QAL+ 
Sbjct: 924 LAKNVMLEELCLEENHLQDEGVCSLAEGLK-KNSSLKILKLSNNCITYLGAEALLQALER 982

Query: 555 NEDV 558
           N+ +
Sbjct: 983 NDTI 986



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 737 VGHLKLTFCSVGPTECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 793

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 794 YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 852

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 853 NNYITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 912

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    I   G
Sbjct: 913 GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 972

Query: 488 AEFVADMLRYNNTISILDLRAN 509
           AE +   L  N+TI  + LR N
Sbjct: 973 AEALLQALERNDTILEVWLRGN 994



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL        L 
Sbjct: 791 KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALR 850

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L NN I  +G   LAE L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 851 LGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 910

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           +IG  G +AL   L ++   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 911 NIGSVGAQALALML-AKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCIT 969

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNI 427
             GAE +  AL++N TI  + L GN  
Sbjct: 970 YLGAEALLQALERNDTILEVWLRGNTF 996



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 836  MAKLLACRQNFLALRLGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEA 895

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L +N
Sbjct: 896  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 955

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +  L
Sbjct: 956  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 1004



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 87/197 (44%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 799 NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITA 858

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G + L + L  N  ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 859 AGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 918

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N I   G  AL+ 
Sbjct: 919 ALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQ 978

Query: 353 GLSSRKGKLAVLDIGNN 369
            L      L V   GN 
Sbjct: 979 ALERNDTILEVWLRGNT 995


>gi|15239712|ref|NP_197433.1| RAN GTPase-activating protein 2 [Arabidopsis thaliana]
 gi|205829463|sp|Q9M651.2|RAGP2_ARATH RecName: Full=RAN GTPase-activating protein 2; Short=AtRanGAP2;
           Short=RanGAP2
 gi|332005302|gb|AED92685.1| RAN GTPase-activating protein 2 [Arabidopsis thaliana]
          Length = 545

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 139/288 (48%), Gaps = 30/288 (10%)

Query: 210 FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL 269
           F   LQ +I L +LNLS N +G++GV+    +L   + +E L L +  +  E A+A++EL
Sbjct: 207 FSDALQGSI-LSSLNLSDNALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSEL 265

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEA-----LLEN----------------------- 301
           + +   LRVL  +NNM    G  ++AE      LLEN                       
Sbjct: 266 IPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHC 325

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           + +  L L  N  G     +L+K L   K + EL+L   ++ DEG  A+++ L      +
Sbjct: 326 THMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALKESASPI 385

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTI 420
            VL++  N I+ + A  +A  +   + L  +NL  N++ DEG  +IA+ +++  + +  I
Sbjct: 386 EVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCIEEGHSKLQYI 445

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           D+  N I   GA A+A V+        L++  N I  +G + L E+ K
Sbjct: 446 DMSTNYIRRAGARALAHVVVKKEAFKLLNIDGNIISEEGIEELKEIFK 493



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 39/293 (13%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRA---LMSGLSSRKGKLAVLDIGNNSISAKGA 376
           N  +  L+G+  L  L+L  N++G++G+RA   L+  LSS    L  L + N+ IS + A
Sbjct: 205 NIFSDALQGS-ILSSLNLSDNALGEKGVRAFGALLKSLSS----LEELYLMNDGISKEAA 259

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
             V+E I + ++L  ++ + N  GDEGA  IA+ +K++  +         + SKG  A++
Sbjct: 260 QAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALS 319

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             L+  + +  LDL  N  G +   +LS+ L    ++  L L +  +   GA  + + L+
Sbjct: 320 EALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALK 379

Query: 497 YN-----------NTISI------------------LDLRANGLRDEGAKCLAQSFKVVN 527
            +           N I++                  L+L  N L+DEG   +A   +  +
Sbjct: 380 ESASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCIEEGH 439

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
             L  ID++ N IR  GA A+A  +   E  A   LN+  N +++ G   L +
Sbjct: 440 SKLQYIDMSTNYIRRAGARALAHVVVKKE--AFKLLNIDGNIISEEGIEELKE 490



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 3/245 (1%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           +E+ Q ++E          +       GDEG   +AE +  +   E    ++  + + G 
Sbjct: 256 KEAAQAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGG 315

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
            A    L+    ++ L+L  N  G E    L   L     +  L LS ++L DEGA AI 
Sbjct: 316 IALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIV 375

Query: 268 ELLKNN-SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
             LK + S + VLE+  N I     +++A  +     +  L+L+ N     G   +A  +
Sbjct: 376 NALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCI 435

Query: 327 -EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
            EG+  L+ + +  N I   G RAL + +  +K    +L+I  N IS +G   + E  K 
Sbjct: 436 EEGHSKLQYIDMSTNYIRRAGARAL-AHVVVKKEAFKLLNIDGNIISEEGIEELKEIFKK 494

Query: 386 CKSLL 390
              LL
Sbjct: 495 SPELL 499


>gi|291414497|ref|XP_002723498.1| PREDICTED: nucleotide-binding oligomerization domain containing
           2-like [Oryctolagus cuniculus]
          Length = 392

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 139/274 (50%), Gaps = 30/274 (10%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L    L  +GA+A+A  L +   ++ L+L +N +  +G  +LA AL + S+I  + L+
Sbjct: 86  LNLRHRGLGPQGARALAPTLASIPYVKRLDLRDNGLRGAGAKALAGALSKTSSICDVDLS 145

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  GA GA AL  GL GN+S+++L L GN + ++  R                      
Sbjct: 146 ENQLGAAGAQALCAGLSGNQSVQKLWLAGNGLEEQAAR---------------------- 183

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
                  ++AE +     L +++L  N + ++  E +A AL +N  +T ++L  N++   
Sbjct: 184 -------YLAELLLAHTGLKFLDLSYNQLNEQAGETLAPALAENTGLTELNLSWNHLRGP 236

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA A AR L+ N  +  LD+++N  G  GA A+ E LK +  +  L +   +I A+GA+ 
Sbjct: 237 GAVAFARALEANIFLKVLDVSHNGFGDPGASAVGEALKTNNVLEELNMSNNRISAAGAQS 296

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           +   LR N T+ IL  R N +R EG   L ++ +
Sbjct: 297 LGLGLRVNQTLRILVTR-NPVRTEGCFGLLKAVR 329



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 2/227 (0%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           EL+L    +G +G RAL   L+S    +  LD+ +N +   GA  +A  +    S+  ++
Sbjct: 85  ELNLRHRGLGPQGARALAPTLASIP-YVKRLDLRDNGLRGAGAKALAGALSKTSSICDVD 143

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N +G  GA+ +   L  N+++  + L GN +  + A  +A +L  ++ +  LDL+YN
Sbjct: 144 LSENQLGAAGAQALCAGLSGNQSVQKLWLAGNGLEEQAARYLAELLLAHTGLKFLDLSYN 203

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            +     + L+  L  +  +  L L W  +   GA   A  L  N  + +LD+  NG  D
Sbjct: 204 QLNEQAGETLAPALAENTGLTELNLSWNHLRGPGAVAFARALEANIFLKVLDVSHNGFGD 263

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
            GA  + ++ K  N  L  ++++ N I   GA ++   L+ N+ + +
Sbjct: 264 PGASAVGEALK-TNNVLEELNMSNNRISAAGAQSLGLGLRVNQTLRI 309



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 2/248 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++  R  G +G   LA +L      + +    NG+  AG KA  G L    ++  ++LS
Sbjct: 86  LNLRHRGLGPQGARALAPTLASIPYVKRLDLRDNGLRGAGAKALAGALSKTSSICDVDLS 145

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N +G  G + LC  L  N  V++L L+   L ++ A+ +AELL  ++ L+ L+L+ N +
Sbjct: 146 ENQLGAAGAQALCAGLSGNQSVQKLWLAGNGLEEQAARYLAELLLAHTGLKFLDLSYNQL 205

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
           +     +LA AL EN+ +  L+L+ N+    GA A A+ LE N  L+ L +  N  GD G
Sbjct: 206 NEQAGETLAPALAENTGLTELNLSWNHLRGPGAVAFARALEANIFLKVLDVSHNGFGDPG 265

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             A+   L +    L  L++ NN ISA GA  +   ++     L I +  N +  EG   
Sbjct: 266 ASAVGEALKTNN-VLEELNMSNNRISAAGAQSLGLGLR-VNQTLRILVTRNPVRTEGCFG 323

Query: 407 IADALKQN 414
           +  A++ N
Sbjct: 324 LLKAVRDN 331



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 3/222 (1%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R+G    L++ +  +  +GA  +A  + +   +  ++L  N +   GA+ +A AL +  +
Sbjct: 79  RQGNTPELNLRHRGLGPQGARALAPTLASIPYVKRLDLRDNGLRGAGAKALAGALSKTSS 138

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I  +DL  N + + GA A+   L  N  +  L LA N +    A+ L+E+L  H  +  L
Sbjct: 139 ICDVDLSENQLGAAGAQALCAGLSGNQSVQKLWLAGNGLEEQAARYLAELLLAHTGLKFL 198

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L + Q+     E +A  L  N  ++ L+L  N LR  GA   A++ +  N  L  +D++
Sbjct: 199 DLSYNQLNEQAGETLAPALAENTGLTELNLSWNHLRGPGAVAFARALE-ANIFLKVLDVS 257

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
            N   D GA A+ +ALK N    +  LN++NN ++  G  +L
Sbjct: 258 HNGFGDPGASAVGEALKTNN--VLEELNMSNNRISAAGAQSL 297


>gi|301616926|ref|XP_002937900.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1-like [Xenopus (Silurana) tropicalis]
          Length = 954

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 116/221 (52%), Gaps = 5/221 (2%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L L  N+I D G++ L+   S    KL V+ +  N I+ +GA  + E +   K + ++ L
Sbjct: 693 LELDNNNINDYGVKELIPCFS----KLTVIRLSVNQITDEGAKVLYEELTKYKVITFLGL 748

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
           Y N I D GA+ IA  +++   +  + LG N    +G + I R + +++ I  + +  N 
Sbjct: 749 YKNLITDFGAQFIARIIEECPKLKRVKLGYNRFTGEGGTYIGRAILNSTSICDIGMWGNE 808

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG  GA A +E +  H ++  L L    I   G + +A+ L+ N ++ IL L  N L DE
Sbjct: 809 IGDVGACAFAEAITNHSSLTHLSLACNGISTEGGKSIAEALQQNTSLKILWLTENKLTDE 868

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            A+  A+  K VN+ L  + L  N+I + GA  +++AL+ N
Sbjct: 869 AAEHFAKMVK-VNKTLRHLWLVNNQITNHGAELLSEALQHN 908



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 126/282 (44%), Gaps = 16/282 (5%)

Query: 179 LFFLAESLGYNQTAEEVSFAANGITAAGIK------------AFDGVLQSNIALKTLNLS 226
             ++A  +   Q+ +    AA GI A  IK            A   VL        L L 
Sbjct: 637 FIWMARCICETQSEKVGKLAAKGICADYIKLSFCGASSSDCGAISFVLNHYHKKIALELD 696

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I D GVK   +++   + +  ++LS   + DEGAK + E L    ++  L L  N+I
Sbjct: 697 NNNINDYGVK---ELIPCFSKLTVIRLSVNQITDEGAKVLYEELTKYKVITFLGLYKNLI 753

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   +A  + E   ++ + L  N     G   + + +  + S+ ++ + GN IGD G
Sbjct: 754 TDFGAQFIARIIEECPKLKRVKLGYNRFTGEGGTYIGRAILNSTSICDIGMWGNEIGDVG 813

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
             A    +++    L  L +  N IS +G   +AE ++   SL  + L  N + DE AE 
Sbjct: 814 ACAFAEAITNHSS-LTHLSLACNGISTEGGKSIAEALQQNTSLKILWLTENKLTDEAAEH 872

Query: 407 IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            A  +K N+T+  + L  N I + GA  ++  L+ N+V+  +
Sbjct: 873 FAKMVKVNKTLRHLWLVNNQITNHGAELLSEALQHNTVMEEI 914



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 85/188 (45%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     DEG   L E L   +    +    N IT  G +    +++    LK + L 
Sbjct: 718 IRLSVNQITDEGAKVLYEELTKYKVITFLGLYKNLITDFGAQFIARIIEECPKLKRVKLG 777

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N    EG   +   ++++  +  + +   ++ D GA A AE + N+S L  L L  N I
Sbjct: 778 YNRFTGEGGTYIGRAILNSTSICDIGMWGNEIGDVGACAFAEAITNHSSLTHLSLACNGI 837

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  S+AEAL +N++++ L L  N      A   AK ++ NK+LR L L  N I + G
Sbjct: 838 STEGGKSIAEALQQNTSLKILWLTENKLTDEAAEHFAKMVKVNKTLRHLWLVNNQITNHG 897

Query: 347 IRALMSGL 354
              L   L
Sbjct: 898 AELLSEAL 905



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 73/160 (45%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G  F+A  +      + V    N  T  G       + ++ ++  + + GN IGD G 
Sbjct: 755 DFGAQFIARIIEECPKLKRVKLGYNRFTGEGGTYIGRAILNSTSICDIGMWGNEIGDVGA 814

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
               + + +++ +  L L+   +  EG K+IAE L+ N+ L++L L  N +        A
Sbjct: 815 CAFAEAITNHSSLTHLSLACNGISTEGGKSIAEALQQNTSLKILWLTENKLTDEAAEHFA 874

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + +  N T+R L L  N     GA  L++ L+ N  + E+
Sbjct: 875 KMVKVNKTLRHLWLVNNQITNHGAELLSEALQHNTVMEEI 914



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 6/101 (5%)

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
           + +KL +C   +S    ++ +L + +    L+L  N + D G K L   F      LT I
Sbjct: 663 DYIKLSFCGASSSDCGAISFVLNHYHKKIALELDNNNINDYGVKELIPCF----SKLTVI 718

Query: 534 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
            L+ N+I D+GA  + + L   +   +T L L  N +T FG
Sbjct: 719 RLSVNQITDEGAKVLYEELTKYK--VITFLGLYKNLITDFG 757


>gi|392341187|ref|XP_003754274.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C14orf166B
           homolog [Rattus norvegicus]
          Length = 479

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 147/288 (51%), Gaps = 9/288 (3%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           ++LN +  G +G  A+A  L    ++ +L L  NSI +EGI +LM  L      L  L++
Sbjct: 95  MNLNHHGLGPMGIKAIAITLVSKTTVLKLELEDNSIQEEGILSLMEMLHENY-YLQELNV 153

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLW-INLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            +N++  +GA  ++++++   S LW + L  N   +E A  +  AL  N  I +++L  N
Sbjct: 154 SDNNLGLEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSHN 213

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
                    + ++L  N  + SL+L++N     GA AL   L+ +  +  L +     G 
Sbjct: 214 EFSDTAGEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNGFGN 273

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            GA  + D L+ N+ +  +D+  NG+ +EGA  +++  +  NE L  + L  N +  +GA
Sbjct: 274 DGALALGDTLKLNSCLVYVDVSRNGITNEGASRISKGLE-NNECLQVLKLFLNPVSLEGA 332

Query: 546 FAIAQALKAN-----EDVAVTSLNLANNFLTKF-GQSALTDAKDLVYE 587
           +++  A+K N     ED+ ++++ ++  F+    G  A+    D+VY+
Sbjct: 333 YSLILAIKRNPKSRMEDLDISNVLVSEQFVKVLDGVCAIHPQLDVVYK 380



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 128/248 (51%), Gaps = 2/248 (0%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           N+    +NL+ + +G  G+K +   LV    V +L+L    +++EG  ++ E+L  N  L
Sbjct: 89  NMEESCMNLNHHGLGPMGIKAIAITLVSKTTVLKLELEDNSIQEEGILSLMEMLHENYYL 148

Query: 277 RVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L +++N +   G   +++ L E NS++  L L+GN      A  L + L  N  +R L
Sbjct: 149 QELNVSDNNLGLEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSL 208

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L  N   D     L   L+   G L  L++  N  + +GA  +   ++   +L  +++ 
Sbjct: 209 NLSHNEFSDTAGEYLGQMLALNVG-LQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVS 267

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN  G++GA  + D LK N  +  +D+  N I ++GAS I++ L++N  +  L L  NP+
Sbjct: 268 MNGFGNDGALALGDTLKLNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPV 327

Query: 456 GADGAKAL 463
             +GA +L
Sbjct: 328 SLEGAYSL 335



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 136/264 (51%), Gaps = 2/264 (0%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           S ++++    G  G+  +A +L    T  ++    N I   GI +   +L  N  L+ LN
Sbjct: 93  SCMNLNHHGLGPMGIKAIAITLVSKTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELN 152

Query: 225 LSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           +S N +G EG + + D L + N+ + +L+LS    ++E A  + + L +N  +R L L++
Sbjct: 153 VSDNNLGLEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSH 212

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N    +    L + L  N  ++SL+L+ N+    GA AL  GL  N +L++L +  N  G
Sbjct: 213 NEFSDTAGEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNGFG 272

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           ++G  AL   L      L  +D+  N I+ +GA  +++ ++N + L  + L++N +  EG
Sbjct: 273 NDGALALGDTLKLNSC-LVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPVSLEG 331

Query: 404 AEKIADALKQNRTITTIDLGGNNI 427
           A  +  A+K+N      DL  +N+
Sbjct: 332 AYSLILAIKRNPKSRMEDLDISNV 355



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 4/283 (1%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           +G+   GIKA    L S   +  L L  N I +EG+  L ++L +N  ++ L +S  +L 
Sbjct: 100 HGLGPMGIKAIAITLVSKTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELNVSDNNLG 159

Query: 260 DEGAKAIAELLK-NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            EGA+ I++ L+ NNS L  L+L+ N         L +AL  N  IRSL+L+ N      
Sbjct: 160 LEGARIISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNYRIRSLNLSHNEFSDTA 219

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              L + L  N  L+ L+L  N     G  AL +GL +    L  LD+  N     GA  
Sbjct: 220 GEYLGQMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNV-TLKKLDVSMNGFGNDGALA 278

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           + + +K    L+++++  N I +EGA +I+  L+ N  +  + L  N +  +GA ++   
Sbjct: 279 LGDTLKLNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPVSLEGAYSLILA 338

Query: 439 LKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +K N  S +  LD++   +     K L  V   H  ++ +  G
Sbjct: 339 IKRNPKSRMEDLDISNVLVSEQFVKVLDGVCAIHPQLDVVYKG 381



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 2/228 (0%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G KAIA  L + + +  LEL +N I   G  SL E L EN  ++ L+++ N  G  GA  
Sbjct: 106 GIKAIAITLVSKTTVLKLELEDNSIQEEGILSLMEMLHENYYLQELNVSDNNLGLEGARI 165

Query: 322 LAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           ++  L E N SL +L L GN   +E    L   LSS   ++  L++ +N  S     ++ 
Sbjct: 166 ISDFLQENNSSLWKLKLSGNKFKEECALLLCQALSSNY-RIRSLNLSHNEFSDTAGEYLG 224

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + +     L  +NL  N     GA  + + L+ N T+  +D+  N   + GA A+   LK
Sbjct: 225 QMLALNVGLQSLNLSWNHFNVRGAVALCNGLRTNVTLKKLDVSMNGFGNDGALALGDTLK 284

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
            NS +  +D++ N I  +GA  +S+ L+ +  +  LKL    +   GA
Sbjct: 285 LNSCLVYVDVSRNGITNEGASRISKGLENNECLQVLKLFLNPVSLEGA 332



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 29/207 (14%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +SG  F +E    L ++L  N     ++ + N  +    +    +L  N+ L++LNLS N
Sbjct: 182 LSGNKFKEECALLLCQALSSNYRIRSLNLSHNEFSDTAGEYLGQMLALNVGLQSLNLSWN 241

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
                G   LC+ L  N  +++L +S     ++GA A+ + LK NS L  ++++ N    
Sbjct: 242 HFNVRGAVALCNGLRTNVTLKKLDVSMNGFGNDGALALGDTLKLNSCLVYVDVSRN---- 297

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            G T+                        GA+ ++KGLE N+ L+ L L  N +  EG  
Sbjct: 298 -GITN-----------------------EGASRISKGLENNECLQVLKLFLNPVSLEGAY 333

Query: 349 ALMSGLS-SRKGKLAVLDIGNNSISAK 374
           +L+  +  + K ++  LDI N  +S +
Sbjct: 334 SLILAIKRNPKSRMEDLDISNVLVSEQ 360


>gi|11545912|ref|NP_071445.1| nucleotide-binding oligomerization domain-containing protein 2 [Homo
            sapiens]
 gi|20137973|sp|Q9HC29.1|NOD2_HUMAN RecName: Full=Nucleotide-binding oligomerization domain-containing
            protein 2; AltName: Full=Caspase recruitment
            domain-containing protein 15; AltName: Full=Inflammatory
            bowel disease protein 1
 gi|11275614|gb|AAG33677.1|AF178930_1 NOD2 protein [Homo sapiens]
 gi|119603173|gb|EAW82767.1| caspase recruitment domain family, member 15 [Homo sapiens]
 gi|157170222|gb|AAI52738.1| Nucleotide-binding oligomerization domain containing 2 [synthetic
            construct]
 gi|162317702|gb|AAI56572.1| Nucleotide-binding oligomerization domain containing 2 [synthetic
            construct]
 gi|261858064|dbj|BAI45554.1| nucleotide-binding oligomerization domain containing 2 [synthetic
            construct]
          Length = 1040

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 122/244 (50%), Gaps = 5/244 (2%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 775  GPTECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 830

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N I + GA  
Sbjct: 831  GICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITAAGAQV 890

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 891  LAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 950

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            L  N  +  L L  N L+DEG   LA+  K  N +L  + L+ N I   GA A+ QAL+ 
Sbjct: 951  LAKNVMLEELCLEENHLQDEGVCSLAEGLK-KNSSLKILKLSNNCITYLGAEALLQALER 1009

Query: 555  NEDV 558
            N+ +
Sbjct: 1010 NDTI 1013



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 764  VGHLKLTFCSVGPTECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 820

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 821  YLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 879

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 880  NNYITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 939

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    I   G
Sbjct: 940  GSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 999

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            AE +   L  N+TI  + LR N
Sbjct: 1000 AEALLQALERNDTILEVWLRGN 1021



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            K L L  N I D G+  L +  +    +++L L +  L D  A ++A+LL        L 
Sbjct: 818  KALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALR 877

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I  +G   LAE L  N++++ L   GN  G  GA ALA+ L  ++SLR L L GN
Sbjct: 878  LGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGN 937

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +IG  G +AL   L ++   L  L +  N +  +G   +AE +K   SL  + L  N I 
Sbjct: 938  NIGSVGAQALALML-AKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCIT 996

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNI 427
              GAE +  AL++N TI  + L GN  
Sbjct: 997  YLGAEALLQALERNDTILEVWLRGNTF 1023



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 863  MAKLLACRQNFLALRLGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEA 922

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L +N
Sbjct: 923  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 982

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +  L
Sbjct: 983  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 1031



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 87/197 (44%)

Query: 173  NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
            N  D G+  L E   + +  ++++   N +T     +   +L        L L  N I  
Sbjct: 826  NISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITA 885

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
             G + L + L  N  ++ L      + DEGA+A+AE L ++  LR L L  N I   G  
Sbjct: 886  AGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQ 945

Query: 293  SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
            +LA  L +N  +  L L  N+    G  +LA+GL+ N SL+ L L  N I   G  AL+ 
Sbjct: 946  ALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQ 1005

Query: 353  GLSSRKGKLAVLDIGNN 369
             L      L V   GN 
Sbjct: 1006 ALERNDTILEVWLRGNT 1022


>gi|395541286|ref|XP_003772576.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Sarcophilus harrisii]
          Length = 995

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 1/206 (0%)

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
           G+L V+ +  N I+  G   + E +   K L ++ LY N I + GA+ +A  +++   +T
Sbjct: 587 GRLTVIRLSVNQITDCGVKVLYEELTKYKILTFLGLYNNQITNVGAKYVAKIVEECTNLT 646

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
            + LG N I S+G   +A  +K +  I  + +  N IG +GAKA +E L+ H ++  L L
Sbjct: 647 HLKLGSNYITSEGGKCLALAVKKSKSIMDVGMWGNKIGDEGAKAFAEALRNHPSLCNLSL 706

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
            +  I   G + +A  L+ N+++ I  L  N L DE A+ LA+  + VN+ L  + L  N
Sbjct: 707 AFNGISTEGGKSLAKALQQNSSVRIFWLTKNNLDDEVAESLAEMLE-VNQTLRDLWLIQN 765

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLN 564
           +I   G   +A AL+ N  +    LN
Sbjct: 766 QITAKGVSCLADALRKNSTILDICLN 791



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 2/209 (0%)

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           + L  N I D G++ L   L+  K  L  L + NN I+  GA +VA+ ++ C +L  + L
Sbjct: 592 IRLSVNQITDCGVKVLYEELTKYK-ILTFLGLYNNQITNVGAKYVAKIVEECTNLTHLKL 650

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N I  EG + +A A+K++++I  + + GN I  +GA A A  L+++  + +L LA+N 
Sbjct: 651 GSNYITSEGGKCLALAVKKSKSIMDVGMWGNKIGDEGAKAFAEALRNHPSLCNLSLAFNG 710

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           I  +G K+L++ L+ + ++    L    +    AE +A+ML  N T+  L L  N +  +
Sbjct: 711 ISTEGGKSLAKALQQNSSVRIFWLTKNNLDDEVAESLAEMLEVNQTLRDLWLIQNQITAK 770

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G  CLA + +  N  +  I L  N I+ +
Sbjct: 771 GVSCLADALR-KNSTILDICLNGNPIKPE 798



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 101/215 (46%), Gaps = 7/215 (3%)

Query: 159 KELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           KELR      + + +S     D G+  L E L   +    +    N IT  G K    ++
Sbjct: 580 KELRPCFGRLTVIRLSVNQITDCGVKVLYEELTKYKILTFLGLYNNQITNVGAKYVAKIV 639

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           +    L  L L  N I  EG KCL   +  +  +  + +    + DEGAKA AE L+N+ 
Sbjct: 640 EECTNLTHLKLGSNYITSEGGKCLALAVKKSKSIMDVGMWGNKIGDEGAKAFAEALRNHP 699

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L L  N I   G  SLA+AL +NS++R   L  N      A +LA+ LE N++LR+
Sbjct: 700 SLCNLSLAFNGISTEGGKSLAKALQQNSSVRIFWLTKNNLDDEVAESLAEMLEVNQTLRD 759

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           L L  N I  +G+  L   L  RK    +LDI  N
Sbjct: 760 LWLIQNQITAKGVSCLADAL--RKNS-TILDICLN 791



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 2/167 (1%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
            +   +N IT+ G K     ++ + ++  + + GN IGDEG K   + L ++  +  L L
Sbjct: 647 HLKLGSNYITSEGGKCLALAVKKSKSIMDVGMWGNKIGDEGAKAFAEALRNHPSLCNLSL 706

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           +   +  EG K++A+ L+ NS +R+  L  N +D     SLAE L  N T+R L L  N 
Sbjct: 707 AFNGISTEGGKSLAKALQQNSSVRIFWLTKNNLDDEVAESLAEMLEVNQTLRDLWLIQNQ 766

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
             A G + LA  L  N ++ ++ L+GN I  E ++        R GK
Sbjct: 767 ITAKGVSCLADALRKNSTILDICLNGNPIKPEEVKVFQD--EKRTGK 811



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 73/154 (47%), Gaps = 28/154 (18%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K+ ++   V M G   GDEG    AE+L  + +   +S A NGI+  G K+    LQ N 
Sbjct: 668 KKSKSIMDVGMWGNKIGDEGAKAFAEALRNHPSLCNLSLAFNGISTEGGKSLAKALQQNS 727

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           +++   L+ N                            +L DE A+++AE+L+ N  LR 
Sbjct: 728 SVRIFWLTKN----------------------------NLDDEVAESLAEMLEVNQTLRD 759

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           L L  N I   G + LA+AL +NSTI  + LNGN
Sbjct: 760 LWLIQNQITAKGVSCLADALRKNSTILDICLNGN 793



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 157 FAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            AK L+  SSV    ++  N  DE    LAE L  NQT  ++    N ITA G+      
Sbjct: 719 LAKALQQNSSVRIFWLTKNNLDDEVAESLAEMLEVNQTLRDLWLIQNQITAKGVSCLADA 778

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCD 240
           L+ N  +  + L+GNPI  E VK   D
Sbjct: 779 LRKNSTILDICLNGNPIKPEEVKVFQD 805


>gi|146183341|ref|XP_001025927.2| hypothetical protein TTHERM_01390270 [Tetrahymena thermophila]
 gi|146143624|gb|EAS05682.2| hypothetical protein TTHERM_01390270 [Tetrahymena thermophila SB210]
          Length = 1630

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 25/308 (8%)

Query: 261  EGAKAIAELLKN--NSILRVLELNNNMIDYSGFTSLAEAL--LENSTIRSLHLNGNYGGA 316
            +GA+ I+  +K+   +I   ++L+ N I   G  S+AEAL   +N T  +L L  N  G 
Sbjct: 1327 QGAEYISNAIKHFRKAIQLDIDLSKNGIKDKGAQSIAEALQYCQNITTFNLSLRNNNIGV 1386

Query: 317  LGANALAKGLEGNKSLRELHLH--GNSIGDEGIRALMSGLSSRKGKLAVLDI--GNNSIS 372
                 +   LE  K L +LHL    N I DEG   L+  L   +  +A L +    N IS
Sbjct: 1387 ESIKNIVNSLEMFKKLSQLHLDLSENDIKDEGANILVRSLKKFEN-MAYLKLVLNKNGIS 1445

Query: 373  AKGAFHVAEYIKNCKSL--LWINLYMNDIGDEGAEKIADALKQNRTITTIDLG--GNNIH 428
            ++GA +++  +K C  +  L I+   N I DEGA+ IA++L + R +T ++L   GN I 
Sbjct: 1446 SEGAMNISNALKRCNKIARLNIDFTNNKIFDEGAKAIANSLTKCRNLTLLNLNIYGNKIT 1505

Query: 429  SKGASAIARVLKDNSVITSLDLAYNP--IGADGAKALSEVLKFHGNINT--LKLGWCQIG 484
            S+G S+I   L+   +I+ L+L  +   I  +GA  +S  L    NI    L L   QI 
Sbjct: 1506 SEGISSITNALEKCQIISKLNLILDEHQIKDEGAYCISRALVKCQNITQLILILEANQIT 1565

Query: 485  ASGAEFVADMLRYNNTIS--ILDLRANGLRDEGAKCLAQSF-KVVNEALTSIDLAFNEIR 541
              GA+ +A  +     IS   L+L +N ++DEGA+ ++ +  K +N  +T +DL   ++R
Sbjct: 1566 YKGAQEIASAIEKCQKISNLTLNLNSNQIQDEGAQSISNTMEKCLN--ITELDL---DLR 1620

Query: 542  DDGAFAIA 549
            +D  F ++
Sbjct: 1621 NDDEFDVS 1628



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 11/222 (4%)

Query: 371  ISAKGAFHVAEYIKNCKSLLWINLYM--NDIGDEGAEKIADALKQNRTITT--IDLGGNN 426
            I +K A  +A  +  C++   +NL +  N IG +GAE I++A+K  R      IDL  N 
Sbjct: 1294 IYSKEAQMIANALAKCQNTTKLNLCLRENHIGSQGAEYISNAIKHFRKAIQLDIDLSKNG 1353

Query: 427  IHSKGASAIARVLKDNSVITSLDLAY--NPIGADGAKALSEVLKFHGNINTLKLGWCQ-- 482
            I  KGA +IA  L+    IT+ +L+   N IG +  K +   L+    ++ L L   +  
Sbjct: 1354 IKDKGAQSIAEALQYCQNITTFNLSLRNNNIGVESIKNIVNSLEMFKKLSQLHLDLSEND 1413

Query: 483  IGASGAEFVADMLRYNNTISILDL--RANGLRDEGAKCLAQSFKVVNE-ALTSIDLAFNE 539
            I   GA  +   L+    ++ L L    NG+  EGA  ++ + K  N+ A  +ID   N+
Sbjct: 1414 IKDEGANILVRSLKKFENMAYLKLVLNKNGISSEGAMNISNALKRCNKIARLNIDFTNNK 1473

Query: 540  IRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            I D+GA AIA +L    ++ + +LN+  N +T  G S++T+A
Sbjct: 1474 IFDEGAKAIANSLTKCRNLTLLNLNIYGNKITSEGISSITNA 1515



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 140/280 (50%), Gaps = 16/280 (5%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS-RKGKLAVLDIGNNSISA 373
              + ANALAK    N +   L L  N IG +G   + + +   RK     +D+  N I  
Sbjct: 1299 AQMIANALAKC--QNTTKLNLCLRENHIGSQGAEYISNAIKHFRKAIQLDIDLSKNGIKD 1356

Query: 374  KGAFHVAEYIKNCKSLLWINLYM--NDIGDEGAEKIADALKQNRTITTI--DLGGNNIHS 429
            KGA  +AE ++ C+++   NL +  N+IG E  + I ++L+  + ++ +  DL  N+I  
Sbjct: 1357 KGAQSIAEALQYCQNITTFNLSLRNNNIGVESIKNIVNSLEMFKKLSQLHLDLSENDIKD 1416

Query: 430  KGASAIARVLK--DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC--QIGA 485
            +GA+ + R LK  +N     L L  N I ++GA  +S  LK    I  L + +   +I  
Sbjct: 1417 EGANILVRSLKKFENMAYLKLVLNKNGISSEGAMNISNALKRCNKIARLNIDFTNNKIFD 1476

Query: 486  SGAEFVADMLRYNNTISILDLR--ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE--IR 541
             GA+ +A+ L     +++L+L    N +  EG   +  + +   + ++ ++L  +E  I+
Sbjct: 1477 EGAKAIANSLTKCRNLTLLNLNIYGNKITSEGISSITNALEKC-QIISKLNLILDEHQIK 1535

Query: 542  DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            D+GA+ I++AL   +++    L L  N +T  G   +  A
Sbjct: 1536 DEGAYCISRALVKCQNITQLILILEANQITYKGAQEIASA 1575



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 15/275 (5%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQ--TAEEVSFAANGITAAGIKAFDGVLQ--SNIALKT 222
            +D+S     D+G   +AE+L Y Q  T   +S   N I    IK     L+    ++   
Sbjct: 1347 IDLSKNGIKDKGAQSIAEALQYCQNITTFNLSLRNNNIGVESIKNIVNSLEMFKKLSQLH 1406

Query: 223  LNLSGNPIGDEGVKCLCDIL--VDNAGVERLQLSSVDLRDEGAKAIAELLKN-NSILRV- 278
            L+LS N I DEG   L   L   +N    +L L+   +  EGA  I+  LK  N I R+ 
Sbjct: 1407 LDLSENDIKDEGANILVRSLKKFENMAYLKLVLNKNGISSEGAMNISNALKRCNKIARLN 1466

Query: 279  LELNNNMIDYSGFTSLAEALLE--NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
            ++  NN I   G  ++A +L +  N T+ +L++ GN   + G +++   LE  + + +L+
Sbjct: 1467 IDFTNNKIFDEGAKAIANSLTKCRNLTLLNLNIYGNKITSEGISSITNALEKCQIISKLN 1526

Query: 337  L--HGNSIGDEGIRALMSGL-SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LW 391
            L    + I DEG   +   L   +     +L +  N I+ KGA  +A  I+ C+ +  L 
Sbjct: 1527 LILDEHQIKDEGAYCISRALVKCQNITQLILILEANQITYKGAQEIASAIEKCQKISNLT 1586

Query: 392  INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
            +NL  N I DEGA+ I++ +++   IT +DL   N
Sbjct: 1587 LNLNSNQIQDEGAQSISNTMEKCLNITELDLDLRN 1621



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 29/148 (19%)

Query: 450  LAYNPIGADGAKALSEVL-KFHGNI---------------------NTLKLGWCQ----I 483
            L++N I ++ A  +  +L KF  NI                     NT K+  C     I
Sbjct: 1235 LSFNTICSEAATVIKNMLYKFKSNIKLKHMKNFDFGTVMSSLDKPVNTFKIDLCYTLEYI 1294

Query: 484  GASGAEFVADML-RYNNTISI-LDLRANGLRDEGAKCLAQSFKVVNEALT-SIDLAFNEI 540
             +  A+ +A+ L +  NT  + L LR N +  +GA+ ++ + K   +A+   IDL+ N I
Sbjct: 1295 YSKEAQMIANALAKCQNTTKLNLCLRENHIGSQGAEYISNAIKHFRKAIQLDIDLSKNGI 1354

Query: 541  RDDGAFAIAQALKANEDVAVTSLNLANN 568
            +D GA +IA+AL+  +++   +L+L NN
Sbjct: 1355 KDKGAQSIAEALQYCQNITTFNLSLRNN 1382


>gi|426243225|ref|XP_004015460.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Ovis
            aries]
          Length = 1054

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 148/319 (46%), Gaps = 15/319 (4%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDIL------VDNAGVERLQLSSVDLRDEGAKAIA 267
            L +N +L  L L  N +G +GVK LC  L      + N  ++R Q+SS   +D     IA
Sbjct: 703  LSTNPSLVELALHSNALGSQGVKLLCQGLRHPNCRLQNLRLKRCQVSSSVCQDLTTALIA 762

Query: 268  ELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGL 326
                NN +LR ++L+ N +   G   L + L      ++ + L      A     LA  L
Sbjct: 763  ----NNHLLR-MDLSGNALGLLGVQLLCQGLRHPKCRLQVVQLRKCQLEAEACQELASVL 817

Query: 327  EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
              +  L EL L GN++ D G+R L  GL     +L +L +    ++      +A  ++  
Sbjct: 818  SASCHLLELDLTGNALEDSGLRLLCQGLRHPVCRLRILWLKICLLTGAACEDLASTLRVN 877

Query: 387  KSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            +SL+ ++L +ND+GD G   + + L+  +  + T+ LG   + S     ++ VL  +S +
Sbjct: 878  QSLVELDLSLNDLGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLSAVLGVSSHL 937

Query: 446  TSLDLAYNPIGADGAKALSEVLKFHGNINTLK-LGWCQIGASGAEFVADMLRYNNTISIL 504
              LDL++N +G  G   L E L+ H      K L  C +     E ++  L  N T++ L
Sbjct: 938  WELDLSFNDLGDRGMSLLCEGLR-HPTCRLRKLLDSCSLTGKACEDISSALGVNQTLTDL 996

Query: 505  DLRANGLRDEGAKCLAQSF 523
             L  N L + G + L +  
Sbjct: 997  YLTNNALGNTGVRLLCERL 1015



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 133/310 (42%), Gaps = 5/310 (1%)

Query: 174  FGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G +G+  L + L + N   + +      ++++  +     L +N  L  ++LSGN +G 
Sbjct: 719  LGSQGVKLLCQGLRHPNCRLQNLRLKRCQVSSSVCQDLTTALIANNHLLRMDLSGNALGL 778

Query: 233  EGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
             GV+ LC  L      ++ +QL    L  E  + +A +L  +  L  L+L  N ++ SG 
Sbjct: 779  LGVQLLCQGLRHPKCRLQVVQLRKCQLEAEACQELASVLSASCHLLELDLTGNALEDSGL 838

Query: 292  TSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              L + L      +R L L            LA  L  N+SL EL L  N +GD G+  L
Sbjct: 839  RLLCQGLRHPVCRLRILWLKICLLTGAACEDLASTLRVNQSLVELDLSLNDLGDPGVLLL 898

Query: 351  MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              GL   + KL  L +G   +S+     ++  +     L  ++L  ND+GD G   + + 
Sbjct: 899  CEGLRHPQCKLQTLRLGICRLSSAACEGLSAVLGVSSHLWELDLSFNDLGDRGMSLLCEG 958

Query: 411  LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
            L+         L   ++  K    I+  L  N  +T L L  N +G  G + L E L   
Sbjct: 959  LRHPTCRLRKLLDSCSLTGKACEDISSALGVNQTLTDLYLTNNALGNTGVRLLCERLSHP 1018

Query: 471  GNINTLKLGW 480
            G    L++ W
Sbjct: 1019 G--CKLRVLW 1026



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 140/330 (42%), Gaps = 14/330 (4%)

Query: 258  LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGA 316
            L D  ++ +A  L  N  L  L L++N +   G   L + L   N  +++L L      +
Sbjct: 691  LPDVYSEQLAAALSTNPSLVELALHSNALGSQGVKLLCQGLRHPNCRLQNLRLKRCQVSS 750

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                 L   L  N  L  + L GN++G  G++ L  GL   K +L V+ +    + A+  
Sbjct: 751  SVCQDLTTALIANNHLLRMDLSGNALGLLGVQLLCQGLRHPKCRLQVVQLRKCQLEAEAC 810

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
              +A  +     LL ++L  N + D G   +   L+     +  + L    +       +
Sbjct: 811  QELASVLSASCHLLELDLTGNALEDSGLRLLCQGLRHPVCRLRILWLKICLLTGAACEDL 870

Query: 436  ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADM 494
            A  L+ N  +  LDL+ N +G  G   L E L+     + TL+LG C++ ++  E ++ +
Sbjct: 871  ASTLRVNQSLVELDLSLNDLGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLSAV 930

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFK----VVNEALTSIDLAFNEIRDDGAFAIAQ 550
            L  ++ +  LDL  N L D G   L +  +     + + L S  L      D     I+ 
Sbjct: 931  LGVSSHLWELDLSFNDLGDRGMSLLCEGLRHPTCRLRKLLDSCSLTGKACED-----ISS 985

Query: 551  ALKANEDVAVTSLNLANNFLTKFGQSALTD 580
            AL  N+   +T L L NN L   G   L +
Sbjct: 986  ALGVNQ--TLTDLYLTNNALGNTGVRLLCE 1013



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 1/138 (0%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            ++   +D+S  + GD G+  L E L + Q   + +      +++A  +    VL  +  L
Sbjct: 878  QSLVELDLSLNDLGDPGVLLLCEGLRHPQCKLQTLRLGICRLSSAACEGLSAVLGVSSHL 937

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
              L+LS N +GD G+  LC+ L       R  L S  L  +  + I+  L  N  L  L 
Sbjct: 938  WELDLSFNDLGDRGMSLLCEGLRHPTCRLRKLLDSCSLTGKACEDISSALGVNQTLTDLY 997

Query: 281  LNNNMIDYSGFTSLAEAL 298
            L NN +  +G   L E L
Sbjct: 998  LTNNALGNTGVRLLCERL 1015


>gi|156355014|ref|XP_001623472.1| predicted protein [Nematostella vectensis]
 gi|156210175|gb|EDO31372.1| predicted protein [Nematostella vectensis]
          Length = 238

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 33/260 (12%)

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
           + LAE L++N+++  +++ G Y G  G  ++AK L+ N ++R L + G  +  E  RAL 
Sbjct: 2   SELAEVLVDNTSLNDVYIGGEYLGDAGVASIAKALKVNTTVRTLGIIGRKMTPEAGRAL- 60

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL 411
                                        E + +  ++  ++L   +IGD GA+ IA  L
Sbjct: 61  ----------------------------GEMLNHNTTITCLSLVNGNIGDTGAQGIASGL 92

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
            QN T+  I +  + I + G SA+A V+++    T LDL+ N IG +GA+A+++V+K   
Sbjct: 93  SQNTTLEKIQIEDSCIGATGVSALAEVIQN---ATHLDLSRNIIGTEGAEAIAKVIKNSC 149

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALT 531
            +  L +  C I   G   +A  L  N  +  L +   G+ D+G   LAQS    N +L 
Sbjct: 150 KLKYLSINHCDIDVLGVRDLAKALSKNTNLGELSVACAGIDDKGMCALAQSV-AENRSLQ 208

Query: 532 SIDLAFNEIRDDGAFAIAQA 551
            + + +N I + G  AI +A
Sbjct: 209 VLTITYNNISEVGKRAIIEA 228



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 6/240 (2%)

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           L ++LVDN  +  + +    L D G  +IA+ LK N+ +R L +    +      +L E 
Sbjct: 4   LAEVLVDNTSLNDVYIGGEYLGDAGVASIAKALKVNTTVRTLGIIGRKMTPEAGRALGEM 63

Query: 298 LLENSTIRSLHL-NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           L  N+TI  L L NGN G   GA  +A GL  N +L ++ +  + IG  G+ AL   + +
Sbjct: 64  LNHNTTITCLSLVNGNIGDT-GAQGIASGLSQNTTLEKIQIEDSCIGATGVSALAEVIQN 122

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
                  LD+  N I  +GA  +A+ IKN   L ++++   DI   G   +A AL +N  
Sbjct: 123 ATH----LDLSRNIIGTEGAEAIAKVIKNSCKLKYLSINHCDIDVLGVRDLAKALSKNTN 178

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  + +    I  KG  A+A+ + +N  +  L + YN I   G +A+ E      ++N L
Sbjct: 179 LGELSVACAGIDDKGMCALAQSVAENRSLQVLTITYNNISEVGKRAIIEACARSQSLNHL 238



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 4/236 (1%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E   +  + + V + G   GD G+  +A++L  N T   +      +T    +A   +
Sbjct: 4   LAEVLVDNTSLNDVYIGGEYLGDAGVASIAKALKVNTTVRTLGIIGRKMTPEAGRALGEM 63

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  +  L+L    IGD G + +   L  N  +E++Q+    +   G  A+AE+++N 
Sbjct: 64  LNHNTTITCLSLVNGNIGDTGAQGIASGLSQNTTLEKIQIEDSCIGATGVSALAEVIQNA 123

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           +    L+L+ N+I   G  ++A+ +  +  ++ L +N      LG   LAK L  N +L 
Sbjct: 124 T---HLDLSRNIIGTEGAEAIAKVIKNSCKLKYLSINHCDIDVLGVRDLAKALSKNTNLG 180

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           EL +    I D+G+ AL   ++  +  L VL I  N+IS  G   + E     +SL
Sbjct: 181 ELSVACAGIDDKGMCALAQSVAENR-SLQVLTITYNNISEVGKRAIIEACARSQSL 235



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 120/236 (50%), Gaps = 4/236 (1%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           LAE L  N +  +V      +  AG+ +    L+ N  ++TL + G  +  E  + L ++
Sbjct: 4   LAEVLVDNTSLNDVYIGGEYLGDAGVASIAKALKVNTTVRTLGIIGRKMTPEAGRALGEM 63

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  +  L L + ++ D GA+ IA  L  N+ L  +++ ++ I  +G ++LAE +++N
Sbjct: 64  LNHNTTITCLSLVNGNIGDTGAQGIASGLSQNTTLEKIQIEDSCIGATGVSALAE-VIQN 122

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           +T   L L+ N  G  GA A+AK ++ +  L+ L ++   I   G+R L   L S+   L
Sbjct: 123 AT--HLDLSRNIIGTEGAEAIAKVIKNSCKLKYLSINHCDIDVLGVRDLAKAL-SKNTNL 179

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
             L +    I  KG   +A+ +   +SL  + +  N+I + G   I +A  +++++
Sbjct: 180 GELSVACAGIDDKGMCALAQSVAENRSLQVLTITYNNISEVGKRAIIEACARSQSL 235



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 4/161 (2%)

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A ++A+ L  N ++  + +GG  +   G ++IA+ LK N+ + +L +    +  +  +AL
Sbjct: 1   ASELAEVLVDNTSLNDVYIGGEYLGDAGVASIAKALKVNTTVRTLGIIGRKMTPEAGRAL 60

Query: 464 SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
            E+L  +  I  L L    IG +GA+ +A  L  N T+  + +  + +   G   LA+  
Sbjct: 61  GEMLNHNTTITCLSLVNGNIGDTGAQGIASGLSQNTTLEKIQIEDSCIGATGVSALAE-- 118

Query: 524 KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            V+  A T +DL+ N I  +GA AIA+ +K +  +   S+N
Sbjct: 119 -VIQNA-THLDLSRNIIGTEGAEAIAKVIKNSCKLKYLSIN 157



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 39/227 (17%)

Query: 389 LLWINLYMNDI-------GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           +L  N  +ND+       GD G   IA ALK N T+ T+ + G  +  +   A+  +L  
Sbjct: 7   VLVDNTSLNDVYIGGEYLGDAGVASIAKALKVNTTVRTLGIIGRKMTPEAGRALGEMLNH 66

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N+ IT L L    IG  GA+ ++  L  +  +  +++    IGA+G   +A++++     
Sbjct: 67  NTTITCLSLVNGNIGDTGAQGIASGLSQNTTLEKIQIEDSCIGATGVSALAEVIQ---NA 123

Query: 502 SILDLRANGLRDEGAKCLAQSFK---------------------------VVNEALTSID 534
           + LDL  N +  EGA+ +A+  K                             N  L  + 
Sbjct: 124 THLDLSRNIIGTEGAEAIAKVIKNSCKLKYLSINHCDIDVLGVRDLAKALSKNTNLGELS 183

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           +A   I D G  A+AQ++  N  + V  L +  N +++ G+ A+ +A
Sbjct: 184 VACAGIDDKGMCALAQSVAENRSLQV--LTITYNNISEVGKRAIIEA 228



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 31/191 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E+ + L E        + + +   N GD G   +A  L  N T E++    + I A
Sbjct: 51  KMTPEAGRALGEMLNHNTTITCLSLVNGNIGDTGAQGIASGLSQNTTLEKIQIEDSCIGA 110

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCL-----------------CDI------ 241
            G+ A   V+Q+      L+LS N IG EG + +                 CDI      
Sbjct: 111 TGVSALAEVIQN---ATHLDLSRNIIGTEGAEAIAKVIKNSCKLKYLSINHCDIDVLGVR 167

Query: 242 -----LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
                L  N  +  L ++   + D+G  A+A+ +  N  L+VL +  N I   G  ++ E
Sbjct: 168 DLAKALSKNTNLGELSVACAGIDDKGMCALAQSVAENRSLQVLTITYNNISEVGKRAIIE 227

Query: 297 ALLENSTIRSL 307
           A   + ++  L
Sbjct: 228 ACARSQSLNHL 238


>gi|270159735|ref|ZP_06188391.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|269988074|gb|EEZ94329.1| conserved hypothetical protein [Legionella longbeachae D-4968]
          Length = 926

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 154/324 (47%), Gaps = 9/324 (2%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            L  +L +N   + +S   N I  A       +L+SN  LK ++LS   I + G+  +  
Sbjct: 82  LLTAALSHNTYLKSLSLRDNYIGNAEAPYIASLLKSNSTLKEIDLSYTAIDEIGINTIAI 141

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L +N  +++L L    +R         L  + SI    ELN        +T L E L E
Sbjct: 142 ALQENRSLKKLDLEGCYIRGITNYLFHILSTHESIQ---ELNFRDCSLQFYTGLTELLSE 198

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG---IRALMSGLSSR 357
           ++++++L+L+ N  G+     L +GL+ NK L +L L    +       ++AL   L+  
Sbjct: 199 STSLKNLNLSKNDLGSYNLEYLTEGLQNNKKLMKLDLSSCGLDTSAPGRLQALAEALNGH 258

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
              L  L++ +N ++A+      E IKN  S+ ++NL  N +GDE    +A+A+  N ++
Sbjct: 259 PS-LNYLNLSSNGLNAEAYPLATEIIKNNFSIRYLNLTANHMGDEAFHNLANAIPNNNSL 317

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           TT+ L  N I +KG   ++  L+ N+ +  LDL  N    D  ++L + L+ +  I ++ 
Sbjct: 318 TTLVLRKNRISNKGLKHLSEALQQNNTLVHLDLTENDF--DSVQSLCDCLQHNIGITSID 375

Query: 478 LGWCQIGASGAEFVADMLRYNNTI 501
               +I  +    +  +L+ N  I
Sbjct: 376 FDKDKITDNSCVEIEQLLKRNQRI 399



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 170/371 (45%), Gaps = 40/371 (10%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           ++ A IK     L  N  LK+L+L  N IG+                             
Sbjct: 75  VSGAFIKLLTAALSHNTYLKSLSLRDNYIGNAE--------------------------- 107

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
            A  IA LLK+NS L+ ++L+   ID  G  ++A AL EN +++ L L G Y   +  N 
Sbjct: 108 -APYIASLLKSNSTLKEIDLSYTAIDEIGINTIAIALQENRSLKKLDLEGCYIRGI-TNY 165

Query: 322 LAKGLEGNKSLRELHLHGNSIG-DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           L   L  ++S++EL+    S+    G+  L+S  +S K     L++  N + +    ++ 
Sbjct: 166 LFHILSTHESIQELNFRDCSLQFYTGLTELLSESTSLKN----LNLSKNDLGSYNLEYLT 221

Query: 381 EYIKNCKSLLWINLYMNDIGDEGA---EKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           E ++N K L+ ++L    +        + +A+AL  + ++  ++L  N ++++       
Sbjct: 222 EGLQNNKKLMKLDLSSCGLDTSAPGRLQALAEALNGHPSLNYLNLSSNGLNAEAYPLATE 281

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           ++K+N  I  L+L  N +G +    L+  +  + ++ TL L   +I   G + +++ L+ 
Sbjct: 282 IIKNNFSIRYLNLTANHMGDEAFHNLANAIPNNNSLTTLVLRKNRISNKGLKHLSEALQQ 341

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
           NNT+  LDL  N      + C      +    +TSID   ++I D+    I Q LK N+ 
Sbjct: 342 NNTLVHLDLTENDFDSVQSLCDCLQHNI---GITSIDFDKDKITDNSCVEIEQLLKRNQR 398

Query: 558 VAVTSLNLANN 568
           +  + L +  N
Sbjct: 399 IKNSYLIILKN 409



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++++  + GDE    LA ++  N +   +    N I+  G+K     LQ N  L  L+L+
Sbjct: 292 LNLTANHMGDEAFHNLANAIPNNNSLTTLVLRKNRISNKGLKHLSEALQQNNTLVHLDLT 351

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
            N    + V+ LCD L  N G+  +      + D     I +LLK N  ++
Sbjct: 352 ENDF--DSVQSLCDCLQHNIGITSIDFDKDKITDNSCVEIEQLLKRNQRIK 400


>gi|372995364|gb|AEY11256.1| NLRC5 [Gallus gallus]
          Length = 1862

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 140/313 (44%), Gaps = 1/313 (0%)

Query: 197  FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
              +   T  GI      LQ   A++ LNL    +GD  +  L   L +   ++RL L+  
Sbjct: 1529 LTSCSFTPTGIDCLITGLQRCQAIEELNLGHMKLGDAAIPKLVFGLCEMPSLKRLILNHN 1588

Query: 257  DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
             + D+G   +AE L +   +  + L +N I   G  ++A  LLE   ++ + L+GN    
Sbjct: 1589 SIGDDGCSRLAEALSSMHCMEEINLGHNKIGDLGLINIAAVLLEMQNLKRIDLSGNCPSP 1648

Query: 317  LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
             G   L + L   K L EL L  N  GD G    ++       +L +L + +N+I   G 
Sbjct: 1649 AGGEKLMEALANCKHLEELILSRNDFGD-GTAVKLALCLPHMNRLKILHLQHNNIGPAGG 1707

Query: 377  FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
              +A  +  C+ L  I+L  N++G+ G   +++ L +   +  I+L    I    +  ++
Sbjct: 1708 TELARALMACELLEEISLSENNLGEGGIRALSEGLPRFEHLRKIELRLCGITDDASKLLS 1767

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            R  +    +  + L++N +G  GA+ L+ +L     +  L L    IGA GA  +A+ L 
Sbjct: 1768 RGFQQCPAVEEIILSWNALGDGGAQVLASILPGMETLKMLDLEKNLIGACGATRLAEELV 1827

Query: 497  YNNTISILDLRAN 509
                I  + L  N
Sbjct: 1828 RCPEIQFIRLWDN 1840



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 142/315 (45%), Gaps = 2/315 (0%)

Query: 238  LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
            L  IL+    +++ +L+S      G   +   L+    +  L L +  +  +    L   
Sbjct: 1514 LVSILLPLPDLKKFELTSCSFTPTGIDCLITGLQRCQAIEELNLGHMKLGDAAIPKLVFG 1573

Query: 298  LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            L E  +++ L LN N  G  G + LA+ L     + E++L  N IGD G+  + + L   
Sbjct: 1574 LCEMPSLKRLILNHNSIGDDGCSRLAEALSSMHCMEEINLGHNKIGDLGLINIAAVLLEM 1633

Query: 358  KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
            +  L  +D+  N  S  G   + E + NCK L  + L  ND GD  A K+A  L     +
Sbjct: 1634 QN-LKRIDLSGNCPSPAGGEKLMEALANCKHLEELILSRNDFGDGTAVKLALCLPHMNRL 1692

Query: 418  TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
              + L  NNI   G + +AR L    ++  + L+ N +G  G +ALSE L    ++  ++
Sbjct: 1693 KILHLQHNNIGPAGGTELARALMACELLEEISLSENNLGEGGIRALSEGLPRFEHLRKIE 1752

Query: 478  LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
            L  C I    ++ ++   +    +  + L  N L D GA+ LA     + E L  +DL  
Sbjct: 1753 LRLCGITDDASKLLSRGFQQCPAVEEIILSWNALGDGGAQVLASILPGM-ETLKMLDLEK 1811

Query: 538  NEIRDDGAFAIAQAL 552
            N I   GA  +A+ L
Sbjct: 1812 NLIGACGATRLAEEL 1826



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 135/305 (44%), Gaps = 29/305 (9%)

Query: 160  ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
            E+ +   + ++  + GD+G   LAE+L      EE++   N I   G+     VL     
Sbjct: 1576 EMPSLKRLILNHNSIGDDGCSRLAEALSSMHCMEEINLGHNKIGDLGLINIAAVLLEMQN 1635

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            LK ++LSGN     G + L + L +   +E L LS  D  D  A  +A  L + + L++L
Sbjct: 1636 LKRIDLSGNCPSPAGGEKLMEALANCKHLEELILSRNDFGDGTAVKLALCLPHMNRLKIL 1695

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L +N I  +G T LA AL+    +  + L+ N  G  G  AL++GL   + LR++ L  
Sbjct: 1696 HLQHNNIGPAGGTELARALMACELLEEISLSENNLGEGGIRALSEGLPRFEHLRKIELRL 1755

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
              I D+  + L  G                              + C ++  I L  N +
Sbjct: 1756 CGITDDASKLLSRGF-----------------------------QQCPAVEEIILSWNAL 1786

Query: 400  GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            GD GA+ +A  L    T+  +DL  N I + GA+ +A  L     I  + L  NP+    
Sbjct: 1787 GDGGAQVLASILPGMETLKMLDLEKNLIGACGATRLAEELVRCPEIQFIRLWDNPVPKGL 1846

Query: 460  AKALS 464
            A++L+
Sbjct: 1847 AESLT 1851



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 97/468 (20%), Positives = 160/468 (34%), Gaps = 122/468 (26%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF------------- 210
             S VD+S    GDEG  FL E+L +   +++++ + N ++  GI +              
Sbjct: 908  LSEVDLSDNKLGDEGCSFLLENLSWISISKQLNLSHNLLSVTGIYSLLKAVNTCQRVVEV 967

Query: 211  ---------------DGVL-----------------------QSNIALKTLNLSGNPIGD 232
                           DG                         Q+ +  K + L+      
Sbjct: 968  EVSLYHNTAVLRFTEDGEFASPPASREEPLYPTDDQWDDKENQTPVPSKKIRLTYCRFQA 1027

Query: 233  EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
              ++ LC +L +   +  L LS+  L DEG   + + L N   LR L+LNNN +  S   
Sbjct: 1028 SDLEKLCAVLKECGSISELDLSNNYLGDEGLAQLLQFLPNLKTLRSLKLNNNHLSLSSVF 1087

Query: 293  SLAEALLENSTIRSLHL------------------------------------NGNY--- 313
             LA++L     + ++ L                                    NG     
Sbjct: 1088 CLAQSLCTLEHLETMDLSLGRMQVVHLTFGDRIRLRRTSRWRRSFLVHPKHVTNGQCFRL 1147

Query: 314  ----GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
                 G      L + L     L E+ L GN++ D+ I  L+S L     +L +L I NN
Sbjct: 1148 RNCTVGPEDVTRLCQMLTQCTQLTEIDLCGNALNDQSIERLLSFLP-HFCQLTLLSIRNN 1206

Query: 370  SISAKGAFHVAEYIKNCKSLLWINLYMND-----------------------IGDEGAEK 406
            + S   A   A  I  C+ +  + +  +                        IG    EK
Sbjct: 1207 TFSPCCAVLFANSINLCERIRRVEVRSSQNAFLHLRTSTQSQKTSCRLTDCAIGQRQIEK 1266

Query: 407  IADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
            +   L+Q+  +  +DL  N +  +    +   L    V  SL+L++N I   G   L   
Sbjct: 1267 LCRVLEQHGCLAELDLSRNQLGDEVLRFLLDHLHRVPVTCSLNLSHNRISQRGVLHLINT 1326

Query: 467  LKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
                GN   +++  C    S A  +  M   ++   IL L     + E
Sbjct: 1327 FTTSGNTTEVQVSLC----SKATLIIKMTSRDDPRKILRLTECSFQPE 1370



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 97/437 (22%), Positives = 174/437 (39%), Gaps = 76/437 (17%)

Query: 156  EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
            E     R    +    R FGD+    L++ LG   + +++      ITAAG+      L 
Sbjct: 719  EMLASCRNVEHLSFRSRRFGDDFAAALSKGLGEMGSLKKLEVTGGSITAAGLTDMVQALS 778

Query: 216  SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE---LLKN 272
              + L+ +NL  N I +  VK + ++      ++++ LS   L       +A+     +N
Sbjct: 779  HCLQLEEINLQDNRIQNPDVKTVMELFSRMEKLKKIDLSKNSLSLNAVLLLAKEFIACQN 838

Query: 273  NSILRVLELNNNMIDYSGFT-----SL-------AEALLENSTIRSLHLNGNYGGALGAN 320
             + L V + +  +I +SG +     SL        E +     +R L L      +  A 
Sbjct: 839  AAELHVRK-DTVIISFSGPSGKVPRSLDLKREQNKECVTPTRHLR-LCLQARCLSSQHAK 896

Query: 321  ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS----SRKGKLAVLDIGNNSISAKGA 376
             +   L+    L E+ L  N +GDEG   L+  LS    S++     L++ +N +S  G 
Sbjct: 897  EIVSILQSCPHLSEVDLSDNKLGDEGCSFLLENLSWISISKQ-----LNLSHNLLSVTGI 951

Query: 377  FHVAEYIKNCKSLLWI--NLYMND----IGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
            + + + +  C+ ++ +  +LY N       ++G      A ++     T D   +     
Sbjct: 952  YSLLKAVNTCQRVVEVEVSLYHNTAVLRFTEDGEFASPPASREEPLYPTDDQWDD----- 1006

Query: 431  GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
                     K+N           P+ +                  ++L +C+  AS  E 
Sbjct: 1007 ---------KENQ---------TPVPS----------------KKIRLTYCRFQASDLEK 1032

Query: 491  VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN--EALTSIDLAFNEIRDDGAFAI 548
            +  +L+   +IS LDL  N L DEG   LAQ  + +   + L S+ L  N +     F +
Sbjct: 1033 LCAVLKECGSISELDLSNNYLGDEG---LAQLLQFLPNLKTLRSLKLNNNHLSLSSVFCL 1089

Query: 549  AQALKANEDVAVTSLNL 565
            AQ+L   E +    L+L
Sbjct: 1090 AQSLCTLEHLETMDLSL 1106



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 113/274 (41%), Gaps = 28/274 (10%)

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
           G  L  + L + L   +++  L       GD+   AL  GL    G L  L++   SI+A
Sbjct: 710 GCPLDTDCL-EMLASCRNVEHLSFRSRRFGDDFAAALSKGLG-EMGSLKKLEVTGGSITA 767

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
            G   + + + +C  L  INL  N I +   + + +   +   +  IDL  N++      
Sbjct: 768 AGLTDMVQALSHCLQLEEINLQDNRIQNPDVKTVMELFSRMEKLKKIDLSKNSLSLNAVL 827

Query: 434 AIARV-----------LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN----INTLKL 478
            +A+            ++ ++VI S        G  G    S  LK   N      T  L
Sbjct: 828 LLAKEFIACQNAAELHVRKDTVIISFS------GPSGKVPRSLDLKREQNKECVTPTRHL 881

Query: 479 GWC----QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
             C     + +  A+ +  +L+    +S +DL  N L DEG   L ++   ++ +   ++
Sbjct: 882 RLCLQARCLSSQHAKEIVSILQSCPHLSEVDLSDNKLGDEGCSFLLENLSWISIS-KQLN 940

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           L+ N +   G +++ +A+   + V    ++L +N
Sbjct: 941 LSHNLLSVTGIYSLLKAVNTCQRVVEVEVSLYHN 974


>gi|260799079|ref|XP_002594527.1| hypothetical protein BRAFLDRAFT_124994 [Branchiostoma floridae]
 gi|229279761|gb|EEN50538.1| hypothetical protein BRAFLDRAFT_124994 [Branchiostoma floridae]
          Length = 578

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 134/263 (50%), Gaps = 7/263 (2%)

Query: 211 DGVLQSNIALKTLN-----LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           DGV+ +   +K L      +  + +G+ G + L   L  N  +  L L    L  EGA A
Sbjct: 148 DGVVPATYLMKHLGDEHLVMRHHYLGERGWRPLAMALRKNVCIRHLDLVDNHLGVEGAVA 207

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           IA  +K++  +  + L+ N + + G +++A  L  NS +++L L  N  G   A   A+ 
Sbjct: 208 IASAVKDSPYISEMNLSENFLGHGG-SAIASMLETNSDLKTLILRANQLGDHEAKTFAEA 266

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L+ N ++  L L  N  G+ G   L +G+ + +G L  L++  N +  KG   +A  IK 
Sbjct: 267 LKRNITMTTLDLSQNQFGELGGIFLGAGIGANEG-LNCLNLSWNHLRLKGGVAIAMGIKV 325

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
            +SL  ++L  N +GD GA     AL+ N+T+  +DL  N I  +GA  ++  L  N  +
Sbjct: 326 NQSLEVLDLSWNGLGDLGATAFGKALRFNKTLRMLDLSNNRITVEGAKKLSLGLAKNEGL 385

Query: 446 TSLDLAYNPIGADGAKALSEVLK 468
            +L L  N IG +G KAL +VL+
Sbjct: 386 ETLMLGTNAIGDEGVKALLKVLE 408



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 142/290 (48%), Gaps = 4/290 (1%)

Query: 295 AEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGL 354
           A  L+++     L +  +Y G  G   LA  L  N  +R L L  N +G EG  A+ S +
Sbjct: 153 ATYLMKHLGDEHLVMRHHYLGERGWRPLAMALRKNVCIRHLDLVDNHLGVEGAVAIASAV 212

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN 414
                 ++ +++  N +   G+  +A  ++    L  + L  N +GD  A+  A+ALK+N
Sbjct: 213 KDSP-YISEMNLSENFLGHGGSA-IASMLETNSDLKTLILRANQLGDHEAKTFAEALKRN 270

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNIN 474
            T+TT+DL  N     G   +   +  N  +  L+L++N +   G  A++  +K + ++ 
Sbjct: 271 ITMTTLDLSQNQFGELGGIFLGAGIGANEGLNCLNLSWNHLRLKGGVAIAMGIKVNQSLE 330

Query: 475 TLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
            L L W  +G  GA      LR+N T+ +LDL  N +  EGAK L+      NE L ++ 
Sbjct: 331 VLDLSWNGLGDLGATAFGKALRFNKTLRMLDLSNNRITVEGAKKLSLGL-AKNEGLETLM 389

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDL 584
           L  N I D+G  A+ + L+  ++  +  L L +  +TK    ++ + +D+
Sbjct: 390 LGTNAIGDEGVKALLKVLE-KKNTTLKVLGLQDITVTKEVYKSIRELEDI 438



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 6/235 (2%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           NF   G   +A  L  N   + +   AN +     K F   L+ NI + TL+LS N  G+
Sbjct: 226 NFLGHGGSAIASMLETNSDLKTLILRANQLGDHEAKTFAEALKRNITMTTLDLSQNQFGE 285

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT 292
            G   L   +  N G+  L LS   LR +G  AIA  +K N  L VL+L+ N +   G T
Sbjct: 286 LGGIFLGAGIGANEGLNCLNLSWNHLRLKGGVAIAMGIKVNQSLEVLDLSWNGLGDLGAT 345

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +  +AL  N T+R L L+ N     GA  L+ GL  N+ L  L L  N+IGDEG++AL+ 
Sbjct: 346 AFGKALRFNKTLRMLDLSNNRITVEGAKKLSLGLAKNEGLETLMLGTNAIGDEGVKALLK 405

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
            L  +   L VL + + +++ +    V + I+  + +  I +    +G  G EKI
Sbjct: 406 VLEKKNTTLKVLGLQDITVTKE----VYKSIRELEDIRGIQIIHAGLG--GYEKI 454


>gi|407835250|gb|EKF99203.1| hypothetical protein TCSYLVIO_009887 [Trypanosoma cruzi]
          Length = 494

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 157/354 (44%), Gaps = 51/354 (14%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL L G  I   GV  +   L+ N  V RL LS  ++ DEGA  +AE+L+ N  ++ L L
Sbjct: 100 TLELQGRKIIPRGVLIIGTALMKNKHVVRLDLSQNNIGDEGAVTMAEVLRKNETIQYLNL 159

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G  +LA A + N     ++ NG  G            + N++L  + L GN 
Sbjct: 160 AQNGITDVGGIALASAFIPN-----VNPNGQPG------------QWNRNLFTIILTGND 202

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +GD+ + A MS  ++    L  +D+  N++   G   +   ++    L   +L  N IGD
Sbjct: 203 LGDDTLLA-MSKAAACHRDLTSVDLSWNNVGPLGTKCLLRSMQR-NPLCVYHLMANKIGD 260

Query: 402 EGAEKIADALKQ--NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            G   + +A+++   +  TT++L  N++  KG  A+ R+L++N  I  + L  N +G  G
Sbjct: 261 AGTTCLCEAMQRFAGKGTTTLNLFRNDVRHKGCEAVGRLLENNEFILDVSLHSNTLGLKG 320

Query: 460 AKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
            + L +      N + +L LG C +G  GA   A ++  N                    
Sbjct: 321 MQLLRQHFTAAPNRVRSLNLGNCMLGDEGAPEAAALITANL------------------- 361

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
                     AL  ++LA N   DDG   I +AL  N  + + S    N F TK
Sbjct: 362 ---------PALERLNLASNGFSDDGGVIIVKALLKNTFLVMVSCA-DNTFGTK 405



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 25/303 (8%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI-------- 218
           +D+S  N GDEG   +AE L  N+T + ++ A NGIT  G  A       N+        
Sbjct: 129 LDLSQNNIGDEGAVTMAEVLRKNETIQYLNLAQNGITDVGGIALASAFIPNVNPNGQPGQ 188

Query: 219 ---ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELL 270
               L T+ L+GN +GD+ +     + +  A      L+SVDL        G K +   +
Sbjct: 189 WNRNLFTIILTGNDLGDDTL-----LAMSKAAACHRDLTSVDLSWNNVGPLGTKCLLRSM 243

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEAL--LENSTIRSLHLNGNYGGALGANALAKGLEG 328
           + N  L V  L  N I  +G T L EA+         +L+L  N     G  A+ + LE 
Sbjct: 244 QRNP-LCVYHLMANKIGDAGTTCLCEAMQRFAGKGTTTLNLFRNDVRHKGCEAVGRLLEN 302

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCK 387
           N+ + ++ LH N++G +G++ L    ++   ++  L++GN  +  +GA   A  I  N  
Sbjct: 303 NEFILDVSLHSNTLGLKGMQLLRQHFTAAPNRVRSLNLGNCMLGDEGAPEAAALITANLP 362

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           +L  +NL  N   D+G   I  AL +N  +  +    N   +K   A A ++    V+  
Sbjct: 363 ALERLNLASNGFSDDGGVIIVKALLKNTFLVMVSCADNTFGTKTVDATAELIGTAKVLKL 422

Query: 448 LDL 450
           LD 
Sbjct: 423 LDF 425



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 13/215 (6%)

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
           A L++    I  +G   +   +   K ++ ++L  N+IGDEGA  +A+ L++N TI  ++
Sbjct: 99  ATLELQGRKIIPRGVLIIGTALMKNKHVVRLDLSQNNIGDEGAVTMAEVLRKNETIQYLN 158

Query: 422 LGGNNIHSKGASAIARVL-----------KDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           L  N I   G  A+A              + N  + ++ L  N +G D   A+S+    H
Sbjct: 159 LAQNGITDVGGIALASAFIPNVNPNGQPGQWNRNLFTIILTGNDLGDDTLLAMSKAAACH 218

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF-KVVNEA 529
            ++ ++ L W  +G  G + +   ++  N + +  L AN + D G  CL ++  +   + 
Sbjct: 219 RDLTSVDLSWNNVGPLGTKCLLRSMQ-RNPLCVYHLMANKIGDAGTTCLCEAMQRFAGKG 277

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            T+++L  N++R  G  A+ + L+ NE +   SL+
Sbjct: 278 TTTLNLFRNDVRHKGCEAVGRLLENNEFILDVSLH 312



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I   G+      L  N  +  L+LS N IGDEG   + ++L  N  ++ L L+   + D 
Sbjct: 108 IIPRGVLIIGTALMKNKHVVRLDLSQNNIGDEGAVTMAEVLRKNETIQYLNLAQNGITDV 167

Query: 262 GAKAIAELLK------------NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           G  A+A                N ++  ++   N++ D +   ++++A   +  + S+ L
Sbjct: 168 GGIALASAFIPNVNPNGQPGQWNRNLFTIILTGNDLGDDT-LLAMSKAAACHRDLTSVDL 226

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK-LAVLDIGN 368
           + N  G LG   L + ++ N  L   HL  N IGD G   L   +    GK    L++  
Sbjct: 227 SWNNVGPLGTKCLLRSMQRN-PLCVYHLMANKIGDAGTTCLCEAMQRFAGKGTTTLNLFR 285

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-----ITTIDLG 423
           N +  KG   V   ++N + +L ++L+ N +G +G +     L+Q+ T     + +++LG
Sbjct: 286 NDVRHKGCEAVGRLLENNEFILDVSLHSNTLGLKGMQ----LLRQHFTAAPNRVRSLNLG 341

Query: 424 GNNIHSKGASAIARVLKDN-SVITSLDLAYNPIGADGAKALSEVL 467
              +  +GA   A ++  N   +  L+LA N    DG   + + L
Sbjct: 342 NCMLGDEGAPEAAALITANLPALERLNLASNGFSDDGGVIIVKAL 386


>gi|320166182|gb|EFW43081.1| hypothetical protein CAOG_08213 [Capsaspora owczarzaki ATCC 30864]
          Length = 633

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 95/178 (53%), Gaps = 32/178 (17%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++AEAL  N+T+  L   GN  G +GA A+A+ L+ NK+L  L+L+ N IGD G +A   
Sbjct: 39  AIAEALKVNTTLTQL---GNQIGDVGAQAIAEALKVNKTLTLLYLNVNQIGDAGAQA--- 92

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
                                     +AE ++  K+L  +NL  N +GD GA+ I +ALK
Sbjct: 93  --------------------------IAEALQVNKTLTLLNLSANRLGDAGAQAIGEALK 126

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
            N T+  + LG N I   GA AIA  LK N+ +T L L  N IG  GA+AL+E LKF 
Sbjct: 127 VNTTLAGLGLGENQIGDVGAQAIAEALKVNTTLTELYLWQNQIGDAGAQALAEALKFE 184



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 96/171 (56%), Gaps = 3/171 (1%)

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
           K K   L +    I  + A  +AE +K   +L  +    N IGD GA+ IA+ALK N+T+
Sbjct: 19  KNKSGTLFLSAKQIGDEEAKAIAEALKVNTTLTQLG---NQIGDVGAQAIAEALKVNKTL 75

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           T + L  N I   GA AIA  L+ N  +T L+L+ N +G  GA+A+ E LK +  +  L 
Sbjct: 76  TLLYLNVNQIGDAGAQAIAEALQVNKTLTLLNLSANRLGDAGAQAIGEALKVNTTLAGLG 135

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
           LG  QIG  GA+ +A+ L+ N T++ L L  N + D GA+ LA++ K   E
Sbjct: 136 LGENQIGDVGAQAIAEALKVNTTLTELYLWQNQIGDAGAQALAEALKFEQE 186



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 98/178 (55%), Gaps = 6/178 (3%)

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           T+ L    I  + A AIA  LK N+ +T L    N IG  GA+A++E LK +  +  L L
Sbjct: 24  TLFLSAKQIGDEEAKAIAEALKVNTTLTQLG---NQIGDVGAQAIAEALKVNKTLTLLYL 80

Query: 479 GWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
              QIG +GA+ +A+ L+ N T+++L+L AN L D GA+ + ++ KV N  L  + L  N
Sbjct: 81  NVNQIGDAGAQAIAEALQVNKTLTLLNLSANRLGDAGAQAIGEALKV-NTTLAGLGLGEN 139

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIF 596
           +I D GA AIA+ALK N    +T L L  N +   G  AL +A     E  ++  N +
Sbjct: 140 QIGDVGAQAIAEALKVN--TTLTELYLWQNQIGDAGAQALAEALKFEQEFPDQHCNHY 195



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 3/147 (2%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           KA    L+ N  L  L   GN IGD G + + + L  N  +  L L+   + D GA+AIA
Sbjct: 38  KAIAEALKVNTTLTQL---GNQIGDVGAQAIAEALKVNKTLTLLYLNVNQIGDAGAQAIA 94

Query: 268 ELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE 327
           E L+ N  L +L L+ N +  +G  ++ EAL  N+T+  L L  N  G +GA A+A+ L+
Sbjct: 95  EALQVNKTLTLLNLSANRLGDAGAQAIGEALKVNTTLAGLGLGENQIGDVGAQAIAEALK 154

Query: 328 GNKSLRELHLHGNSIGDEGIRALMSGL 354
            N +L EL+L  N IGD G +AL   L
Sbjct: 155 VNTTLTELYLWQNQIGDAGAQALAEAL 181



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 86/168 (51%), Gaps = 3/168 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S +  GDE    +AE+L  N T  ++    N I   G +A    L+ N  L  L L+ N
Sbjct: 27  LSAKQIGDEEAKAIAEALKVNTTLTQL---GNQIGDVGAQAIAEALKVNKTLTLLYLNVN 83

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + + L  N  +  L LS+  L D GA+AI E LK N+ L  L L  N I  
Sbjct: 84  QIGDAGAQAIAEALQVNKTLTLLNLSANRLGDAGAQAIGEALKVNTTLAGLGLGENQIGD 143

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
            G  ++AEAL  N+T+  L+L  N  G  GA ALA+ L+  +   + H
Sbjct: 144 VGAQAIAEALKVNTTLTELYLWQNQIGDAGAQALAEALKFEQEFPDQH 191



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 84/172 (48%), Gaps = 4/172 (2%)

Query: 143 TGKLFRESKQTLNEFAKE----LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           +G LF  +KQ  +E AK     L+  +++   G   GD G   +AE+L  N+T   +   
Sbjct: 22  SGTLFLSAKQIGDEEAKAIAEALKVNTTLTQLGNQIGDVGAQAIAEALKVNKTLTLLYLN 81

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I  AG +A    LQ N  L  LNLS N +GD G + + + L  N  +  L L    +
Sbjct: 82  VNQIGDAGAQAIAEALQVNKTLTLLNLSANRLGDAGAQAIGEALKVNTTLAGLGLGENQI 141

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
            D GA+AIAE LK N+ L  L L  N I  +G  +LAEAL         H N
Sbjct: 142 GDVGAQAIAEALKVNTTLTELYLWQNQIGDAGAQALAEALKFEQEFPDQHCN 193


>gi|290982526|ref|XP_002673981.1| predicted protein [Naegleria gruberi]
 gi|284087568|gb|EFC41237.1| predicted protein [Naegleria gruberi]
          Length = 363

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 205/410 (50%), Gaps = 76/410 (18%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N I+  G K    + Q    L +LN+S N IG +G K +          E  QL+
Sbjct: 7   LNVSNNQISGKGAKYISEMKQ----LTSLNISNNRIGGKGAKYIS---------EMKQLT 53

Query: 255 SVDL-----RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           S+++      DEGAK I+E+ +    L  L+++ N I   G    A+ + E   + SL++
Sbjct: 54  SLNIFNNRISDEGAKYISEMKQ----LISLDISYNQIGAEG----AKFISEMKQLTSLNI 105

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N     GA  +++     K L  L++  N I  EG + +     S   +L  L++ NN
Sbjct: 106 SYNEISDEGAKYISEM----KQLTSLNISYNDIS-EGAKPI-----SEMKQLTSLNVSNN 155

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            IS KGA    +YI   K L  +N+  N I  +GA+ I + +KQ   +T++D+  N I  
Sbjct: 156 QISGKGA----KYISEMKQLTSLNISDNQISGKGAKYIGE-MKQ---LTSLDISNNQISD 207

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAE 489
           +GA    + L +   + SL+++ N I    AK +SE+ +    + +L +   QI    A+
Sbjct: 208 EGA----KFLSEMKQLISLNVSNNQISGKEAKFMSEMKQ----LTSLNISNNQISDERAK 259

Query: 490 FVADMLRYNNTISILDLRANGLRDEGAKCLAQ---------SFKVVN-----EALTSIDL 535
           ++++M +    ++ LD+  N + DEGAK +++         S+  ++     + LTS+++
Sbjct: 260 YISEMKQ----LTSLDIFNNLISDEGAKYISEMKHLTSLDISYNEISHISEMKQLTSLNI 315

Query: 536 AFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
           +FN+I D+GA +I+      E   +TSL+++ N +   G   +++ K L 
Sbjct: 316 SFNQINDEGAKSIS------EMKQLTSLDMSYNRIGGEGAKYISEMKHLT 359



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 176/384 (45%), Gaps = 82/384 (21%)

Query: 131 SVGAGTNLLSGFTGKLFRESKQ--TLN-----------EFAKELRAFSSVDMSGRNFGDE 177
           S+    N +SG   K   E KQ  +LN           ++  E++  +S+++      DE
Sbjct: 6   SLNVSNNQISGKGAKYISEMKQLTSLNISNNRIGGKGAKYISEMKQLTSLNIFNNRISDE 65

Query: 178 GLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKC 237
           G  +++E     +    +  + N I A G K    + Q    L +LN+S N I DEG K 
Sbjct: 66  GAKYISEM----KQLISLDISYNQIGAEGAKFISEMKQ----LTSLNISYNEISDEGAKY 117

Query: 238 LCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA 297
           + ++      +  L +S  D+  EGAK I+E+ +    L  L ++NN I   G    A+ 
Sbjct: 118 ISEM----KQLTSLNISYNDI-SEGAKPISEMKQ----LTSLNVSNNQISGKG----AKY 164

Query: 298 LLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
           + E   + SL+++ N     GA  + +     K L  L +  N I DEG + L     S 
Sbjct: 165 ISEMKQLTSLNISDNQISGKGAKYIGEM----KQLTSLDISNNQISDEGAKFL-----SE 215

Query: 358 KGKLAVLDIGNNSISAKGAFHVAE--------------------YIKNCKSLLWINLYMN 397
             +L  L++ NN IS K A  ++E                    YI   K L  ++++ N
Sbjct: 216 MKQLISLNVSNNQISGKEAKFMSEMKQLTSLNISNNQISDERAKYISEMKQLTSLDIFNN 275

Query: 398 DIGDEGAEKIADA---------------LKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
            I DEGA+ I++                + + + +T++++  N I+ +GA +I+ + +  
Sbjct: 276 LISDEGAKYISEMKHLTSLDISYNEISHISEMKQLTSLNISFNQINDEGAKSISEMKQ-- 333

Query: 443 SVITSLDLAYNPIGADGAKALSEV 466
             +TSLD++YN IG +GAK +SE+
Sbjct: 334 --LTSLDMSYNRIGGEGAKYISEM 355



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 134/245 (54%), Gaps = 46/245 (18%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           +L  L++ NN IS KGA    +YI   K L  +N+  N IG +GA+ I++ +KQ   +T+
Sbjct: 3   QLTSLNVSNNQISGKGA----KYISEMKQLTSLNISNNRIGGKGAKYISE-MKQ---LTS 54

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           +++  N I  +GA  I+ + +    + SLD++YN IGA+GAK +SE+ +    + +L + 
Sbjct: 55  LNIFNNRISDEGAKYISEMKQ----LISLDISYNQIGAEGAKFISEMKQ----LTSLNIS 106

Query: 480 WCQIGASGAEFVADM-------LRYNN------------TISILDLRANGLRDEGAKCLA 520
           + +I   GA+++++M       + YN+             ++ L++  N +  +GAK ++
Sbjct: 107 YNEISDEGAKYISEMKQLTSLNISYNDISEGAKPISEMKQLTSLNVSNNQISGKGAKYIS 166

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           +      + LTS++++ N+I   GA  I       E   +TSL+++NN ++  G   L++
Sbjct: 167 EM-----KQLTSLNISDNQISGKGAKYIG------EMKQLTSLDISNNQISDEGAKFLSE 215

Query: 581 AKDLV 585
            K L+
Sbjct: 216 MKQLI 220


>gi|149706081|ref|XP_001499616.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Equus caballus]
          Length = 953

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 1/209 (0%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
           G   L + L   K +  L L+ N I D G R + S L   KG L  L +G N I+++G  
Sbjct: 744 GVKVLHEELTKYKIVTFLGLYKNQITDVGARYIASILDECKG-LMYLKLGENKITSEGGK 802

Query: 378 HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
            +A  +KN KS+  + ++ N IGDEGA+  A+AL+ + ++T + L  N I ++G  ++A 
Sbjct: 803 CLALAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAW 862

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
            L+ N+ +    L  N +  + A++L+E+LK +  +  L L   QI A G   + D L+ 
Sbjct: 863 ALQQNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGVAQLVDALQK 922

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVV 526
           N  I  + L  N ++ E AK      ++V
Sbjct: 923 NTGIMEICLNGNLIKPEEAKVFEDEKRIV 951



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 115/241 (47%), Gaps = 7/241 (2%)

Query: 346 GIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
           G+R L    S     L ++ +  N I+  G   + E +   K + ++ LY N I D GA 
Sbjct: 719 GVRELQPCFS----HLTIIRLSVNQITDSGVKVLHEELTKYKIVTFLGLYKNQITDVGAR 774

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            IA  L + + +  + LG N I S+G   +A  +K++  I  + +  N IG +GAKA +E
Sbjct: 775 YIASILDECKGLMYLKLGENKITSEGGKCLALAVKNSKSIFEVGMWGNRIGDEGAKAFAE 834

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            L+ H ++  L L +  I   G + +A  L+ N ++ I  L  N L DE A+ LA+  KV
Sbjct: 835 ALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNTSLRIFWLTKNELDDEVAESLAEMLKV 894

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
            N+ L  + L  N+I   G   +  AL+ N  +    LN   N +         D K +V
Sbjct: 895 -NQTLKHLWLIQNQITAKGVAQLVDALQKNTGIMEICLN--GNLIKPEEAKVFEDEKRIV 951

Query: 586 Y 586
           +
Sbjct: 952 F 952



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 29/246 (11%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  + LS N I D GVK L + L     V  L L    + D GA+ IA +L     L  L
Sbjct: 730 LTIIRLSVNQITDSGVKVLHEELTKYKIVTFLGLYKNQITDVGARYIASILDECKGLMYL 789

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L  N I                               G   LA  ++ +KS+ E+ + G
Sbjct: 790 KLGENKITSE----------------------------GGKCLALAVKNSKSIFEVGMWG 821

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG +A    L +    L  L +  N IS +G   +A  ++   SL    L  N++
Sbjct: 822 NRIGDEGAKAFAEALRNHPS-LTNLSLAFNGISTEGGKSLAWALQQNTSLRIFWLTKNEL 880

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DE AE +A+ LK N+T+  + L  N I +KG + +   L+ N+ I  + L  N I  + 
Sbjct: 881 DDEVAESLAEMLKVNQTLKHLWLIQNQITAKGVAQLVDALQKNTGIMEICLNGNLIKPEE 940

Query: 460 AKALSE 465
           AK   +
Sbjct: 941 AKVFED 946



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 93/202 (46%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           + +S     D G+  L E L   +    +    N IT  G +    +L     L  L L 
Sbjct: 733 IRLSVNQITDSGVKVLHEELTKYKIVTFLGLYKNQITDVGARYIASILDECKGLMYLKLG 792

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N I  EG KCL   + ++  +  + +    + DEGAKA AE L+N+  L  L L  N I
Sbjct: 793 ENKITSEGGKCLALAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGI 852

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  SLA AL +N+++R   L  N      A +LA+ L+ N++L+ L L  N I  +G
Sbjct: 853 STEGGKSLAWALQQNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKG 912

Query: 347 IRALMSGLSSRKGKLAVLDIGN 368
           +  L+  L    G + +   GN
Sbjct: 913 VAQLVDALQKNTGIMEICLNGN 934



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 92/194 (47%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           + L+E   + +  + + +      D G  ++A  L   +    +    N IT+ G K   
Sbjct: 746 KVLHEELTKYKIVTFLGLYKNQITDVGARYIASILDECKGLMYLKLGENKITSEGGKCLA 805

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             ++++ ++  + + GN IGDEG K   + L ++  +  L L+   +  EG K++A  L+
Sbjct: 806 LAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAWALQ 865

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N+ LR+  L  N +D     SLAE L  N T++ L L  N   A G   L   L+ N  
Sbjct: 866 QNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGVAQLVDALQKNTG 925

Query: 332 LRELHLHGNSIGDE 345
           + E+ L+GN I  E
Sbjct: 926 IMEICLNGNLIKPE 939



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 28/168 (16%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L    K  ++   V M G   GDEG    AE+L  + +   +S A NGI+ 
Sbjct: 795 KITSEGGKCLALAVKNSKSIFEVGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGIST 854

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G K+    LQ N +L+   L+ N                            +L DE A+
Sbjct: 855 EGGKSLAWALQQNTSLRIFWLTKN----------------------------ELDDEVAE 886

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++AE+LK N  L+ L L  N I   G   L +AL +N+ I  + LNGN
Sbjct: 887 SLAEMLKVNQTLKHLWLIQNQITAKGVAQLVDALQKNTGIMEICLNGN 934


>gi|440894993|gb|ELR47303.1| Leucine-rich repeat-containing protein 34, partial [Bos grunniens
           mutus]
          Length = 425

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 36/252 (14%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N +S  GA++ A+ ++   +L+++NL  NDIG EG E IA AL +NRT+  + L 
Sbjct: 89  LDVRYNLLSDVGAYYAAKLLQKQHNLIYLNLMFNDIGPEGGELIAKALHKNRTLKHLRLT 148

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL------- 476
           GN I +KG    A +L+ NS +  LDL    +G     A + VL  +  I  L       
Sbjct: 149 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNQTIKGLNLNRPIL 208

Query: 477 ----------------------KLGWCQ--IGASGAEFVADMLRYNNTISILDLRANGLR 512
                                 +L  C+  I   G + + D L  N ++  LD+  N + 
Sbjct: 209 YGEQEESTVHLGHMLKENQCLIELHMCKHDIKNCGMKQLCDALHLNRSLQYLDVSCNKIT 268

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN----EDVAVTSLNLANN 568
            +G KCLA   K  N  L  IDL+FN + + GA  ++ AL ++    + ++V S N+   
Sbjct: 269 QDGMKCLADVLK-SNITLEVIDLSFNRMENAGANYLSDALASHNRTLKALSVVSNNIEGK 327

Query: 569 FLTKFGQSALTD 580
            L    QS  T+
Sbjct: 328 GLVALSQSMKTN 339



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 151/330 (45%), Gaps = 15/330 (4%)

Query: 152 QTLNEFAKELR----------AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           Q L E  KE+           A +S  +SG     E  + L   L  N     +    N 
Sbjct: 36  QILQEVDKEIEKGSVGITLNIAGNSRSVSGERVTGEDFWILCRVLKNNSYINGLDVRYNL 95

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           ++  G      +LQ    L  LNL  N IG EG + +   L  N  ++ L+L+   + ++
Sbjct: 96  LSDVGAYYAAKLLQKQHNLIYLNLMFNDIGPEGGELIAKALHKNRTLKHLRLTGNKIENK 155

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--YGGALGA 319
           G    A +L+ NS L  L+L +  +      + A  L +N TI+ L+LN    YG    +
Sbjct: 156 GGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNQTIKGLNLNRPILYGEQEES 215

Query: 320 NA-LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
              L   L+ N+ L ELH+  + I + G++ L   L   +  L  LD+  N I+  G   
Sbjct: 216 TVHLGHMLKENQCLIELHMCKHDIKNCGMKQLCDALHLNRS-LQYLDVSCNKITQDGMKC 274

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIAR 437
           +A+ +K+  +L  I+L  N + + GA  ++DAL   NRT+  + +  NNI  KG  A+++
Sbjct: 275 LADVLKSNITLEVIDLSFNRMENAGANYLSDALASHNRTLKALSVVSNNIEGKGLVALSQ 334

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVL 467
            +K N  ++ + +  N        A S+++
Sbjct: 335 SMKTNPTLSHIYIWGNKFDEATCVAYSDLI 364



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 159/340 (46%), Gaps = 9/340 (2%)

Query: 217 NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
           NIA  + ++SG  +  E    LC +L +N+ +  L +    L D GA   A+LL+    L
Sbjct: 55  NIAGNSRSVSGERVTGEDFWILCRVLKNNSYINGLDVRYNLLSDVGAYYAAKLLQKQHNL 114

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELH 336
             L L  N I   G   +A+AL +N T++ L L GN     G    A  L+ N SL +L 
Sbjct: 115 IYLNLMFNDIGPEGGELIAKALHKNRTLKHLRLTGNKIENKGGMFFAAMLQINSSLEKLD 174

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI----SAKGAFHVAEYIKNCKSLLWI 392
           L    +G + + A  + L+  +  +  L++ N  I      +   H+   +K  + L+ +
Sbjct: 175 LGDCDLGMQSVIAFATVLTQNQ-TIKGLNL-NRPILYGEQEESTVHLGHMLKENQCLIEL 232

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           ++  +DI + G +++ DAL  NR++  +D+  N I   G   +A VLK N  +  +DL++
Sbjct: 233 HMCKHDIKNCGMKQLCDALHLNRSLQYLDVSCNKITQDGMKCLADVLKSNITLEVIDLSF 292

Query: 453 NPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           N +   GA  LS+ L  H   +  L +    I   G   ++  ++ N T+S + +  N  
Sbjct: 293 NRMENAGANYLSDALASHNRTLKALSVVSNNIEGKGLVALSQSMKTNPTLSHIYIWGNKF 352

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
            DE A C+A S  +    L S +        DG   +A+ 
Sbjct: 353 -DE-ATCVAYSDLIHTGRLKSDNTDVEPFVVDGHVYLAEV 390



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 9/299 (3%)

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           F  L   L  NS I  L +  N    +GA   AK L+   +L  L+L  N IG EG   +
Sbjct: 73  FWILCRVLKNNSYINGLDVRYNLLSDVGAYYAAKLLQKQHNLIYLNLMFNDIGPEGGELI 132

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              L   +  L  L +  N I  KG    A  ++   SL  ++L   D+G +     A  
Sbjct: 133 AKALHKNR-TLKHLRLTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFATV 191

Query: 411 LKQNRTITTIDLGGNNIHSKGASA---IARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
           L QN+TI  ++L    ++ +   +   +  +LK+N  +  L +  + I   G K L + L
Sbjct: 192 LTQNQTIKGLNLNRPILYGEQEESTVHLGHMLKENQCLIELHMCKHDIKNCGMKQLCDAL 251

Query: 468 KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVN 527
             + ++  L +   +I   G + +AD+L+ N T+ ++DL  N + + GA  L+ +    N
Sbjct: 252 HLNRSLQYLDVSCNKITQDGMKCLADVLKSNITLEVIDLSFNRMENAGANYLSDALASHN 311

Query: 528 EALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 586
             L ++ +  N I   G  A++Q++K N  ++   +     +  KF ++      DL++
Sbjct: 312 RTLKALSVVSNNIEGKGLVALSQSMKTNPTLSHIYI-----WGNKFDEATCVAYSDLIH 365



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 1/141 (0%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
            ES   L    KE +    + M   +  + G+  L ++L  N++ + +  + N IT  G+
Sbjct: 213 EESTVHLGHMLKENQCLIELHMCKHDIKNCGMKQLCDALHLNRSLQYLDVSCNKITQDGM 272

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKAI 266
           K    VL+SNI L+ ++LS N + + G   L D L   N  ++ L + S ++  +G  A+
Sbjct: 273 KCLADVLKSNITLEVIDLSFNRMENAGANYLSDALASHNRTLKALSVVSNNIEGKGLVAL 332

Query: 267 AELLKNNSILRVLELNNNMID 287
           ++ +K N  L  + +  N  D
Sbjct: 333 SQSMKTNPTLSHIYIWGNKFD 353


>gi|289165493|ref|YP_003455631.1| hypothetical protein LLO_2165 [Legionella longbeachae NSW150]
 gi|288858666|emb|CBJ12563.1| Hypothetical protein, LRR and tropomodulin domains [Legionella
           longbeachae NSW150]
          Length = 926

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 154/324 (47%), Gaps = 9/324 (2%)

Query: 181 FLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCD 240
            L  +L +N   + +S   N I  A       +L+SN  LK ++LS   I + G+  +  
Sbjct: 82  LLTAALSHNTYLKSLSLRDNYIGNAEAPYIASLLKSNSTLKEIDLSYTAIDEIGINTIAI 141

Query: 241 ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE 300
            L +N  +++L L    +R         L  + SI    ELN        +T L E L E
Sbjct: 142 ALQENRSLKKLDLEGCYIRGITNYLFHILSTHESIQ---ELNFRDCSLQFYTGLTELLSE 198

Query: 301 NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG---IRALMSGLSSR 357
           ++++++L+L+ N  G+     L +GL+ NK L +L L    +       ++AL   L+  
Sbjct: 199 STSLKNLNLSKNDLGSYNLEYLTEGLQNNKKLMKLDLSSCGLDTSAPGRLQALAEALNGH 258

Query: 358 KGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
              L  L++ +N ++A+      E IKN  S+ ++NL  N +GDE    +A+A+  N ++
Sbjct: 259 PS-LNYLNLSSNGLNAEAYPLATEIIKNNFSIRYLNLTANHMGDEAFHNLANAIPNNNSL 317

Query: 418 TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLK 477
           TT+ L  N I +KG   ++  L+ N+ +  LDL  N    D  ++L + L+ +  I ++ 
Sbjct: 318 TTLVLRKNRISNKGLKHLSEALQQNNTLVHLDLTENDF--DSVQSLCDCLQHNIGITSID 375

Query: 478 LGWCQIGASGAEFVADMLRYNNTI 501
               +I  +    +  +L+ N  I
Sbjct: 376 FDKDKITDNSCVEIEQLLKRNQRI 399



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 170/371 (45%), Gaps = 40/371 (10%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           ++ A IK     L  N  LK+L+L  N IG+                             
Sbjct: 75  VSGAFIKLLTAALSHNTYLKSLSLRDNYIGNAE--------------------------- 107

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
            A  IA LLK+NS L+ ++L+   ID  G  ++A AL EN +++ L L G Y   +  N 
Sbjct: 108 -APYIASLLKSNSTLKEIDLSYTAIDEIGINTIAIALQENRSLKKLDLEGCYIRGI-TNY 165

Query: 322 LAKGLEGNKSLRELHLHGNSIG-DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           L   L  ++S++EL+    S+    G+  L+S  +S K     L++  N + +    ++ 
Sbjct: 166 LFHILSTHESIQELNFRDCSLQFYTGLTELLSESTSLKN----LNLSKNDLGSYNLEYLT 221

Query: 381 EYIKNCKSLLWINLYMNDIGDEGA---EKIADALKQNRTITTIDLGGNNIHSKGASAIAR 437
           E ++N K L+ ++L    +        + +A+AL  + ++  ++L  N ++++       
Sbjct: 222 EGLQNNKKLMKLDLSSCGLDTSAPGRLQALAEALNGHPSLNYLNLSSNGLNAEAYPLATE 281

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRY 497
           ++K+N  I  L+L  N +G +    L+  +  + ++ TL L   +I   G + +++ L+ 
Sbjct: 282 IIKNNFSIRYLNLTANHMGDEAFHNLANAIPNNNSLTTLVLRKNRISNKGLKHLSEALQQ 341

Query: 498 NNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANED 557
           NNT+  LDL  N      + C      +    +TSID   ++I D+    I Q LK N+ 
Sbjct: 342 NNTLVHLDLTENDFDSVQSLCDCLQHNI---GITSIDFDKDKITDNSCVEIEQLLKRNQR 398

Query: 558 VAVTSLNLANN 568
           +  + L +  N
Sbjct: 399 IKNSYLIILKN 409



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           ++++  + GDE    LA ++  N +   +    N I+  G+K     LQ N  L  L+L+
Sbjct: 292 LNLTANHMGDEAFHNLANAIPNNNSLTTLVLRKNRISNKGLKHLSEALQQNNTLVHLDLT 351

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
            N    + V+ LCD L  N G+  +      + D     I +LLK N  ++
Sbjct: 352 ENDF--DSVQSLCDCLQHNIGITSIDFDKDKITDNSCVEIEQLLKRNQRIK 400


>gi|146182816|ref|XP_001025335.2| hypothetical protein TTHERM_01287930 [Tetrahymena thermophila]
 gi|146143705|gb|EAS05090.2| hypothetical protein TTHERM_01287930 [Tetrahymena thermophila
           SB210]
          Length = 590

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 178/374 (47%), Gaps = 26/374 (6%)

Query: 215 QSNIALKT-LNLSGNPIGDEGVKCLCDILVDNAGVERLQL--SSVDLRDEGAKAIAELLK 271
           +S I LK  L   G  I +EG + + + L       +L L  S   + DE  K IA  L+
Sbjct: 152 KSAITLKIDLCQQGKSILNEGAQKIANTLAKCQNTTKLNLCLSECSIIDEATKIIAYNLR 211

Query: 272 NNSILRVLELN--NNMIDYSGFTSLAEAL--LENSTIRSLHLNGNYGGALGANALAKGLE 327
           N   +  L LN  +N I   G   +++A+     +    + LN N     GA  +A  L+
Sbjct: 212 NCKNITELSLNLSSNKIGIQGAKYISDAIKHFRKAIQLDIDLNQNDIKEEGAQCIADALQ 271

Query: 328 G--NKSLRELHLHGNSIGDEGIRALMSGLSS-RKGKLAVLDIGNNSISAKGAFHVAEYIK 384
              N ++  L L  N IG E I+ + + L   +K     LD+  N I   G  +++  + 
Sbjct: 272 NCQNITIFNLSLRKNKIGAESIKNIANSLEMFKKLSQVSLDLSQNKIGIDGTHYISRALI 331

Query: 385 NCKSL--LWINLYMNDIGDEGAEKIADALKQNRTITTIDLG--GNNIHSKGASAIARVLK 440
           NC ++  L INL  NDI DEGA+ IA AL++   +  + L    N+I S+GA  I   LK
Sbjct: 332 NCYNVNQLSINLGENDIKDEGAKFIASALEKCENLADLKLSLKENHISSEGAKNILNALK 391

Query: 441 DNSVITSLDLAY--NPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG--AEFVADMLR 496
             + IT L++ +  N I A+GAK ++  L    N+  L L  CQ           AD L 
Sbjct: 392 SCNKITGLNIDFENNKISAEGAKNIANALTKLQNLTLLNLDLCQYFQESDLVNVFADSLA 451

Query: 497 YNNTISILDLR-ANGLRDEGAKCLAQSFKVVNEA--LTSIDLAFN--EIRDDGAFAIAQA 551
            +  IS LDL  +  L  + AK +   +KV+ +   +T + L F   +I D+GA+ I++A
Sbjct: 452 NSENISELDLEFSANLNSQNAKNI---YKVLEKCQNVTQLSLKFQNADIGDEGAYYISRA 508

Query: 552 LKANEDVAVTSLNL 565
            +  +++    L+ 
Sbjct: 509 FEKCQNITQLKLDF 522



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 205/421 (48%), Gaps = 29/421 (6%)

Query: 171 GRNFGDEGLFFLAESLGYNQTAEEVSFAANGIT----AAGIKAFDGVLQSNIALKTLNLS 226
           G++  +EG   +A +L   Q   +++   +  +    A  I A++     NI   +LNLS
Sbjct: 165 GKSILNEGAQKIANTLAKCQNTTKLNLCLSECSIIDEATKIIAYNLRNCKNITELSLNLS 224

Query: 227 GNPIGDEGVKCLCDIL--VDNAGVERLQLSSVDLRDEGAKAIAELLKN--NSILRVLELN 282
            N IG +G K + D +     A    + L+  D+++EGA+ IA+ L+N  N  +  L L 
Sbjct: 225 SNKIGIQGAKYISDAIKHFRKAIQLDIDLNQNDIKEEGAQCIADALQNCQNITIFNLSLR 284

Query: 283 NNMIDYSGFTSLAEAL--LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL--HLH 338
            N I      ++A +L   +  +  SL L+ N  G  G + +++ L    ++ +L  +L 
Sbjct: 285 KNKIGAESIKNIANSLEMFKKLSQVSLDLSQNKIGIDGTHYISRALINCYNVNQLSINLG 344

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSL--LWINLY 395
            N I DEG + + S L   +    + L +  N IS++GA ++   +K+C  +  L I+  
Sbjct: 345 ENDIKDEGAKFIASALEKCENLADLKLSLKENHISSEGAKNILNALKSCNKITGLNIDFE 404

Query: 396 MNDIGDEGAEKIADALK--QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
            N I  EGA+ IA+AL   QN T+  +DL      S   +  A  L ++  I+ LDL ++
Sbjct: 405 NNKISAEGAKNIANALTKLQNLTLLNLDLCQYFQESDLVNVFADSLANSENISELDLEFS 464

Query: 454 P-IGADGAKALSEVLKFHGNINTLKLGW--CQIGASGAEFVADMLRYNNTISIL--DLRA 508
             + +  AK + +VL+   N+  L L +    IG  GA +++        I+ L  D R 
Sbjct: 465 ANLNSQNAKNIYKVLEKCQNVTQLSLKFQNADIGDEGAYYISRAFEKCQNITQLKLDFRF 524

Query: 509 NGLRDEGAKCLAQSF----KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
             +  +G + ++ +     K+ N AL   +L+ N I+D+G  +I+  L+  +++    LN
Sbjct: 525 TQIEAKGVQEISSAIEKCQKITNLAL---NLSMNNIQDEGVLSISNTLEKCQNITELFLN 581

Query: 565 L 565
           L
Sbjct: 582 L 582



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 36/257 (14%)

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSL--L 390
           +L   G SI +EG + + + L+  +    + L +   SI  +    +A  ++NCK++  L
Sbjct: 160 DLCQQGKSILNEGAQKIANTLAKCQNTTKLNLCLSECSIIDEATKIIAYNLRNCKNITEL 219

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITT--IDLGGNNIHSKGASAIARVLKD--NSVIT 446
            +NL  N IG +GA+ I+DA+K  R      IDL  N+I  +GA  IA  L++  N  I 
Sbjct: 220 SLNLSSNKIGIQGAKYISDAIKHFRKAIQLDIDLNQNDIKEEGAQCIADALQNCQNITIF 279

Query: 447 SLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ--IGASGAEFVADMLRYNNTISIL 504
           +L L  N IGA+  K ++  L+    ++ + L   Q  IG  G  +++  L         
Sbjct: 280 NLSLRKNKIGAESIKNIANSLEMFKKLSQVSLDLSQNKIGIDGTHYISRAL--------- 330

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
                                 N    SI+L  N+I+D+GA  IA AL+  E++A   L+
Sbjct: 331 ------------------INCYNVNQLSINLGENDIKDEGAKFIASALEKCENLADLKLS 372

Query: 565 LANNFLTKFGQSALTDA 581
           L  N ++  G   + +A
Sbjct: 373 LKENHISSEGAKNILNA 389



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 103/199 (51%), Gaps = 13/199 (6%)

Query: 399 IGDEGAEKIADALK--QNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT--SLDLAYNP 454
           I +EGA+KIA+ L   QN T   + L   +I  +    IA  L++   IT  SL+L+ N 
Sbjct: 168 ILNEGAQKIANTLAKCQNTTKLNLCLSECSIIDEATKIIAYNLRNCKNITELSLNLSSNK 227

Query: 455 IGADGAKALSEVLK-FHGNIN-TLKLGWCQIGASGAEFVADMLRYNNTISI--LDLRANG 510
           IG  GAK +S+ +K F   I   + L    I   GA+ +AD L+    I+I  L LR N 
Sbjct: 228 IGIQGAKYISDAIKHFRKAIQLDIDLNQNDIKEEGAQCIADALQNCQNITIFNLSLRKNK 287

Query: 511 LRDEGAKCLAQSFKVVNE-ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
           +  E  K +A S ++  + +  S+DL+ N+I  DG   I++AL    +V   S+NL  N 
Sbjct: 288 IGAESIKNIANSLEMFKKLSQVSLDLSQNKIGIDGTHYISRALINCYNVNQLSINLGEND 347

Query: 570 L----TKFGQSALTDAKDL 584
           +     KF  SAL   ++L
Sbjct: 348 IKDEGAKFIASALEKCENL 366



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 24/277 (8%)

Query: 166 SVDMSGRNFGDEGLFFLAESL--GYNQTAEEVSFAANGITAAGIKAFDGVLQ--SNIALK 221
           S+D+S    G +G  +++ +L   YN     ++   N I   G K     L+   N+A  
Sbjct: 310 SLDLSQNKIGIDGTHYISRALINCYNVNQLSINLGENDIKDEGAKFIASALEKCENLADL 369

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD-----EGAKAIAELLKNNSIL 276
            L+L  N I  EG K   +IL       ++   ++D  +     EGAK IA  L     L
Sbjct: 370 KLSLKENHISSEGAK---NILNALKSCNKITGLNIDFENNKISAEGAKNIANALTKLQNL 426

Query: 277 RVLELNNNMIDYSGFTSL----AEALLENSTIRSLHLNGNYG-GALGANALAKGLEGNKS 331
            +L L+  +  Y   + L    A++L  +  I  L L  +    +  A  + K LE  ++
Sbjct: 427 TLLNLD--LCQYFQESDLVNVFADSLANSENISELDLEFSANLNSQNAKNIYKVLEKCQN 484

Query: 332 LRELHL--HGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKS 388
           + +L L      IGDEG   +       +    + LD     I AKG   ++  I+ C+ 
Sbjct: 485 VTQLSLKFQNADIGDEGAYYISRAFEKCQNITQLKLDFRFTQIEAKGVQEISSAIEKCQK 544

Query: 389 L--LWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           +  L +NL MN+I DEG   I++ L++ + IT + L 
Sbjct: 545 ITNLALNLSMNNIQDEGVLSISNTLEKCQNITELFLN 581



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 92/186 (49%), Gaps = 9/186 (4%)

Query: 392 INLYM--NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLD 449
           ++LY+  N I  E A+ I + L+Q ++   ++   N+  +     I   L  +++   +D
Sbjct: 101 LDLYLDFNIISSEAAQVIKNMLQQYKSNIKLNHQFNSYKNFDYETIMSALDKSAITLKID 160

Query: 450 LAYN--PIGADGAKALSEVLKFHGNINTLKL--GWCQIGASGAEFVADMLRYNNTIS--I 503
           L      I  +GA+ ++  L    N   L L    C I     + +A  LR    I+   
Sbjct: 161 LCQQGKSILNEGAQKIANTLAKCQNTTKLNLCLSECSIIDEATKIIAYNLRNCKNITELS 220

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALT-SIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
           L+L +N +  +GAK ++ + K   +A+   IDL  N+I+++GA  IA AL+  +++ + +
Sbjct: 221 LNLSSNKIGIQGAKYISDAIKHFRKAIQLDIDLNQNDIKEEGAQCIADALQNCQNITIFN 280

Query: 563 LNLANN 568
           L+L  N
Sbjct: 281 LSLRKN 286


>gi|405963904|gb|EKC29436.1| hypothetical protein CGI_10023826 [Crassostrea gigas]
          Length = 592

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 8/246 (3%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            G  G   +A+++  N+   E+    N I   G +     L+ N  ++ L+L GN   +E
Sbjct: 199 LGGYGAKCIADAITRNEYLTEIRIVENNIGTEGARVICDALRKNNYVRRLDLKGNGFHEE 258

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
             K   D+L +N  +  L LS    ++ G +  A+ L NN  LRVL+L+ N +   G  +
Sbjct: 259 DAKYFKDMLDENHALRELYLSHNKFQELGGEIFADGLANNDFLRVLDLSWNHLRMRGAMA 318

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +  AL  N  +  L ++ N     GA  +++ LE N +L EL+L  N + D  I+ L++G
Sbjct: 319 IGSALQVNRHLEKLDISWNGFHIRGALTISRALEINTTLLELNLSCNRLSDGCIQILVNG 378

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD----EGAEKIAD 409
           L  +   L VL I  N I   GAF + E I+N  S   I L + D+GD    +  EK+  
Sbjct: 379 L-KKNSNLKVLRIAQNQIYPPGAFKILESIENTPS---IALELLDLGDTPVMDTFEKLYK 434

Query: 410 ALKQNR 415
            L++ R
Sbjct: 435 KLQEIR 440



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 3/244 (1%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  ++TL L  N +G  G KC+ D +  N  +  +++   ++  EGA+ I + L+ N
Sbjct: 183 LVRNSIVETLILESNELGGYGAKCIADAITRNEYLTEIRIVENNIGTEGARVICDALRKN 242

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
           + +R L+L  N           + L EN  +R L+L+ N    LG    A GL  N  LR
Sbjct: 243 NYVRRLDLKGNGFHEEDAKYFKDMLDENHALRELYLSHNKFQELGGEIFADGLANNDFLR 302

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            L L  N +   G  A+ S L   +  L  LDI  N    +GA  ++  ++   +LL +N
Sbjct: 303 VLDLSWNHLRMRGAMAIGSALQVNR-HLEKLDISWNGFHIRGALTISRALEINTTLLELN 361

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT--SLDLA 451
           L  N + D   + + + LK+N  +  + +  N I+  GA  I   +++   I    LDL 
Sbjct: 362 LSCNRLSDGCIQILVNGLKKNSNLKVLRIAQNQIYPPGAFKILESIENTPSIALELLDLG 421

Query: 452 YNPI 455
             P+
Sbjct: 422 DTPV 425



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 3/212 (1%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R   +  L + +N +   GA  +A+ I   + L  I +  N+IG EGA  I DAL++N  
Sbjct: 185 RNSIVETLILESNELGGYGAKCIADAITRNEYLTEIRIVENNIGTEGARVICDALRKNNY 244

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +  +DL GN  H + A     +L +N  +  L L++N     G +  ++ L  +  +  L
Sbjct: 245 VRRLDLKGNGFHEEDAKYFKDMLDENHALRELYLSHNKFQELGGEIFADGLANNDFLRVL 304

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L W  +   GA  +   L+ N  +  LD+  NG    GA  ++++ + +N  L  ++L+
Sbjct: 305 DLSWNHLRMRGAMAIGSALQVNRHLEKLDISWNGFHIRGALTISRALE-INTTLLELNLS 363

Query: 537 FNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
            N + D     +   LK N ++ V  L +A N
Sbjct: 364 CNRLSDGCIQILVNGLKKNSNLKV--LRIAQN 393



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 130/293 (44%), Gaps = 7/293 (2%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            +RL +  V L+   +KA A  L  NSI+  L L +N +   G   +A+A+  N  +  +
Sbjct: 161 TDRLAVVGVILKKNESKACAIGLVRNSIVETLILESNELGGYGAKCIADAITRNEYLTEI 220

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +  N  G  GA  +   L  N  +R L L GN   +E  +     L      L  L + 
Sbjct: 221 RIVENNIGTEGARVICDALRKNNYVRRLDLKGNGFHEEDAKYFKDMLDENHA-LRELYLS 279

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           +N     G    A+ + N   L  ++L  N +   GA  I  AL+ NR +  +D+  N  
Sbjct: 280 HNKFQELGGEIFADGLANNDFLRVLDLSWNHLRMRGAMAIGSALQVNRHLEKLDISWNGF 339

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
           H +GA  I+R L+ N+ +  L+L+ N +     + L   LK + N+  L++   QI   G
Sbjct: 340 HIRGALTISRALEINTTLLELNLSCNRLSDGCIQILVNGLKKNSNLKVLRIAQNQIYPPG 399

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
           A  + + +   NT SI    A  L D G   +  +F+ + + L  I   F  I
Sbjct: 400 AFKILESI--ENTPSI----ALELLDLGDTPVMDTFEKLYKKLQEIRNPFKVI 446



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 2/249 (0%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           + A A GL  N  +  L L  N +G  G + +   ++ R   L  + I  N+I  +GA  
Sbjct: 176 SKACAIGLVRNSIVETLILESNELGGYGAKCIADAIT-RNEYLTEIRIVENNIGTEGARV 234

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           + + ++    +  ++L  N   +E A+   D L +N  +  + L  N     G    A  
Sbjct: 235 ICDALRKNNYVRRLDLKGNGFHEEDAKYFKDMLDENHALRELYLSHNKFQELGGEIFADG 294

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L +N  +  LDL++N +   GA A+   L+ + ++  L + W      GA  ++  L  N
Sbjct: 295 LANNDFLRVLDLSWNHLRMRGAMAIGSALQVNRHLEKLDISWNGFHIRGALTISRALEIN 354

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            T+  L+L  N L D   + L    K  N  L  + +A N+I   GAF I ++++    +
Sbjct: 355 TTLLELNLSCNRLSDGCIQILVNGLK-KNSNLKVLRIAQNQIYPPGAFKILESIENTPSI 413

Query: 559 AVTSLNLAN 567
           A+  L+L +
Sbjct: 414 ALELLDLGD 422


>gi|320168607|gb|EFW45506.1| pelle/IL-1 receptor associated Kinase [Capsaspora owczarzaki ATCC
           30864]
          Length = 1265

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 113/189 (59%), Gaps = 10/189 (5%)

Query: 381 EYIKNCKSLLWINL-YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           E +KN  S L ++  +M D+     + +A+ALK N T+T +D+   ++   GA AIA  L
Sbjct: 35  ERVKNASSELPLSWPWMCDVE---TQTLAEALKVNTTLTQLDIPNRSLREDGAQAIAEAL 91

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
           K N+ +T LDL  N IG  GA+A++E LK +  +  L+     +G +GA  +++ LR N+
Sbjct: 92  KVNTALTQLDLHNNQIGDAGAQAIAEALKVNTALIQLE---NLVGDAGALSISEALRANS 148

Query: 500 TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
           T+  L+L +N + D GA+ ++++ +  N+ L  + L FN+I D GA +I++AL+  E+  
Sbjct: 149 TLQNLNLGSNQIGDAGARSISEALR-QNKTLQILSLWFNQIGDAGALSISEALR--ENTT 205

Query: 560 VTSLNLANN 568
           +  LNL  N
Sbjct: 206 LQKLNLEFN 214



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 32/205 (15%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L LS   + D   + L + L  N  + +L + +  LR++GA+AIAE LK N+ L  L+L+
Sbjct: 44  LPLSWPWMCDVETQTLAEALKVNTTLTQLDIPNRSLREDGAQAIAEALKVNTALTQLDLH 103

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
           NN I  +G  ++AEAL  N+ +  L    N  G  GA ++++ L  N +L+ L+L  N I
Sbjct: 104 NNQIGDAGAQAIAEALKVNTALIQLE---NLVGDAGALSISEALRANSTLQNLNLGSNQI 160

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G R+                             ++E ++  K+L  ++L+ N IGD 
Sbjct: 161 GDAGARS-----------------------------ISEALRQNKTLQILSLWFNQIGDA 191

Query: 403 GAEKIADALKQNRTITTIDLGGNNI 427
           GA  I++AL++N T+  ++L  N I
Sbjct: 192 GALSISEALRENTTLQKLNLEFNQI 216



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 4/178 (2%)

Query: 307 LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
           L L+  +   +    LA+ L+ N +L +L +   S+ ++G +A+   L      L  LD+
Sbjct: 44  LPLSWPWMCDVETQTLAEALKVNTTLTQLDIPNRSLREDGAQAIAEALKVNTA-LTQLDL 102

Query: 367 GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN 426
            NN I   GA  +AE +K   +L+ +    N +GD GA  I++AL+ N T+  ++LG N 
Sbjct: 103 HNNQIGDAGAQAIAEALKVNTALIQLE---NLVGDAGALSISEALRANSTLQNLNLGSNQ 159

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           I   GA +I+  L+ N  +  L L +N IG  GA ++SE L+ +  +  L L + QIG
Sbjct: 160 IGDAGARSISEALRQNKTLQILSLWFNQIGDAGALSISEALRENTTLQKLNLEFNQIG 217



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 3/164 (1%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           QTL E  K     + +D+  R+  ++G   +AE+L  N    ++    N I  AG +A  
Sbjct: 57  QTLAEALKVNTTLTQLDIPNRSLREDGAQAIAEALKVNTALTQLDLHNNQIGDAGAQAIA 116

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L+ N AL  L    N +GD G   + + L  N+ ++ L L S  + D GA++I+E L+
Sbjct: 117 EALKVNTALIQLE---NLVGDAGALSISEALRANSTLQNLNLGSNQIGDAGARSISEALR 173

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
            N  L++L L  N I  +G  S++EAL EN+T++ L+L  N  G
Sbjct: 174 QNKTLQILSLWFNQIGDAGALSISEALRENTTLQKLNLEFNQIG 217



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  +  Q + E  K   A + +D+     GD G   +AE+L  N    ++    N +  A
Sbjct: 79  LREDGAQAIAEALKVNTALTQLDLHNNQIGDAGAQAIAEALKVNTALIQLE---NLVGDA 135

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G  +    L++N  L+ LNL  N IGD G + + + L  N  ++ L L    + D GA +
Sbjct: 136 GALSISEALRANSTLQNLNLGSNQIGDAGARSISEALRQNKTLQILSLWFNQIGDAGALS 195

Query: 266 IAELLKNNSILRVLELNNNMIDY 288
           I+E L+ N+ L+ L L  N I Y
Sbjct: 196 ISEALRENTTLQKLNLEFNQIGY 218


>gi|290978242|ref|XP_002671845.1| predicted protein [Naegleria gruberi]
 gi|284085417|gb|EFC39101.1| predicted protein [Naegleria gruberi]
          Length = 439

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 185/397 (46%), Gaps = 66/397 (16%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           +EG  F  +     +    +  + N I+   +K F  +      L  L ++ N IG EG 
Sbjct: 86  EEGNLFNCQIFECLKNLTRIDISDNEISDERVKHFGNLTH----LTNLVINCNDIGVEGA 141

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAEL-------LKNNSI------------- 275
           KCLC +      + RL + +  L  EGAK I+EL       +  N I             
Sbjct: 142 KCLCQL----NQLTRLNIGNNSLETEGAKYISELKNLTKLDIARNCIGDRGAQFITEMKQ 197

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L LN N I+Y G    A+ + E   + SL ++ N  G+ GA  ++K       L +L
Sbjct: 198 LTSLNLNRNGIEYLG----AKFISEMYQLTSLDISNNDIGSEGAKQISKL----DQLTKL 249

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +++ N+IGDEG   +     S   +L  LDI  N I ++GA  + E  +    L  +N+ 
Sbjct: 250 YIYDNNIGDEGAMHI-----SEMKQLTNLDISRNDIDSEGAKSICELYQ----LTNLNIC 300

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N IG+ GA+ I++       +T +++G N I S+GA  I+R+ +    +T L +  N I
Sbjct: 301 SNYIGETGAKHISEM----NNLTILEIGSNEIGSEGAYHISRMHQ----LTRLMIFANDI 352

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G  GAK +SE+ +    +  L +    IG  G   +++M +    ++ LD+ AN +  EG
Sbjct: 353 GEKGAKHVSEMKQ----LTKLDIYDNNIGDEGTIHISEMKQ----LTYLDVSANNIGHEG 404

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
           A+ + +  +     LT +++ +N   D  +  I + L
Sbjct: 405 AEYIRKLNR-----LTFLNVHYNSFSDSESELIEKEL 436



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 150/310 (48%), Gaps = 42/310 (13%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           ++  EL+  + +D++    GD G  F+ E     +    ++   NGI   G K    + Q
Sbjct: 166 KYISELKNLTKLDIARNCIGDRGAQFITEM----KQLTSLNLNRNGIEYLGAKFISEMYQ 221

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
               L +L++S N IG EG K +  +      + +L +   ++ DEGA  I+E+ +    
Sbjct: 222 ----LTSLDISNNDIGSEGAKQISKL----DQLTKLYIYDNNIGDEGAMHISEMKQ---- 269

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L+++ N ID  G  S+ E       + +L++  NY G  GA  +++      +L  L
Sbjct: 270 LTNLDISRNDIDSEGAKSICELY----QLTNLNICSNYIGETGAKHISEM----NNLTIL 321

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
            +  N IG EG   +     SR  +L  L I  N I  KGA HV+E     K L  +++Y
Sbjct: 322 EIGSNEIGSEGAYHI-----SRMHQLTRLMIFANDIGEKGAKHVSEM----KQLTKLDIY 372

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
            N+IGDEG   I++ +KQ   +T +D+  NNI  +GA  I ++ +    +T L++ YN  
Sbjct: 373 DNNIGDEGTIHISE-MKQ---LTYLDVSANNIGHEGAEYIRKLNR----LTFLNVHYNSF 424

Query: 456 GADGAKALSE 465
            +D    L E
Sbjct: 425 -SDSESELIE 433


>gi|320170199|gb|EFW47098.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 392

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 93/157 (59%), Gaps = 8/157 (5%)

Query: 432 ASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFV 491
           A AI+  LK N+ +T   +  N IG  GA A++E LK +G +  ++L   QIG +GA+ +
Sbjct: 49  AQAISEALKVNTTLTQFGMGTNQIGDAGATAIAEALKVNGKLYWVELEDNQIGDAGAQAI 108

Query: 492 ADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
           A+ LR N T+  L L AN + D GA+ +A++ KV N+ LTS+ L+ N+I D GA AIA+A
Sbjct: 109 AEALRVNTTLKYLILYANRIGDAGAQAIAEALKV-NKTLTSLRLSKNQIGDAGAQAIAEA 167

Query: 552 LKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEM 588
           LK N        NL  N + K G  AL  A+   Y++
Sbjct: 168 LKVN-------TNLNCNCIGKAGAQALNKAQSCRYKL 197



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 88/168 (52%), Gaps = 11/168 (6%)

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           REL L    IGD   +A+   L      L    +G N I   GA  +AE +K    L W+
Sbjct: 36  RELFL-DQQIGDAEAQAISEALKVNT-TLTQFGMGTNQIGDAGATAIAEALKVNGKLYWV 93

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
            L  N IGD GA+ IA+AL+ N T+  + L  N I   GA AIA  LK N  +TSL L+ 
Sbjct: 94  ELEDNQIGDAGAQAIAEALRVNTTLKYLILYANRIGDAGAQAIAEALKVNKTLTSLRLSK 153

Query: 453 NPIGADGAKALSEVLKFHGNINTLKLGWCQ-IGASGAEFV--ADMLRY 497
           N IG  GA+A++E LK + N+N      C  IG +GA+ +  A   RY
Sbjct: 154 NQIGDAGAQAIAEALKVNTNLN------CNCIGKAGAQALNKAQSCRY 195



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 78/129 (60%)

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
             IGD  A+ I++ALK N T+T   +G N I   GA+AIA  LK N  +  ++L  N IG
Sbjct: 42  QQIGDAEAQAISEALKVNTTLTQFGMGTNQIGDAGATAIAEALKVNGKLYWVELEDNQIG 101

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             GA+A++E L+ +  +  L L   +IG +GA+ +A+ L+ N T++ L L  N + D GA
Sbjct: 102 DAGAQAIAEALRVNTTLKYLILYANRIGDAGAQAIAEALKVNKTLTSLRLSKNQIGDAGA 161

Query: 517 KCLAQSFKV 525
           + +A++ KV
Sbjct: 162 QAIAEALKV 170



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 7/148 (4%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           ++E +K   +L    +  N IGD GA  IA+ALK N  +  ++L  N I   GA AIA  
Sbjct: 52  ISEALKVNTTLTQFGMGTNQIGDAGATAIAEALKVNGKLYWVELEDNQIGDAGAQAIAEA 111

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N+ +  L L  N IG  GA+A++E LK +  + +L+L   QIG +GA+ +A+ L+ N
Sbjct: 112 LRVNTTLKYLILYANRIGDAGAQAIAEALKVNKTLTSLRLSKNQIGDAGAQAIAEALKVN 171

Query: 499 NTISILDLRANGLRDEGAKCL--AQSFK 524
                 +L  N +   GA+ L  AQS +
Sbjct: 172 T-----NLNCNCIGKAGAQALNKAQSCR 194



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 70/125 (56%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IGD   + + + L  N  + +  + +  + D GA AIAE LK N  L  +EL +N I  +
Sbjct: 44  IGDAEAQAISEALKVNTTLTQFGMGTNQIGDAGATAIAEALKVNGKLYWVELEDNQIGDA 103

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  ++AEAL  N+T++ L L  N  G  GA A+A+ L+ NK+L  L L  N IGD G +A
Sbjct: 104 GAQAIAEALRVNTTLKYLILYANRIGDAGAQAIAEALKVNKTLTSLRLSKNQIGDAGAQA 163

Query: 350 LMSGL 354
           +   L
Sbjct: 164 IAEAL 168



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 5/161 (3%)

Query: 197 FAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSV 256
           F    I  A  +A    L+ N  L    +  N IGD G   + + L  N  +  ++L   
Sbjct: 39  FLDQQIGDAEAQAISEALKVNTTLTQFGMGTNQIGDAGATAIAEALKVNGKLYWVELEDN 98

Query: 257 DLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
            + D GA+AIAE L+ N+ L+ L L  N I  +G  ++AEAL  N T+ SL L+ N  G 
Sbjct: 99  QIGDAGAQAIAEALRVNTTLKYLILYANRIGDAGAQAIAEALKVNKTLTSLRLSKNQIGD 158

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSR 357
            GA A+A+ L+ N +     L+ N IG  G +AL    S R
Sbjct: 159 AGAQAIAEALKVNTN-----LNCNCIGKAGAQALNKAQSCR 194



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 89/191 (46%), Gaps = 21/191 (10%)

Query: 143 TGKLFRESKQTLNEFAKELRAFSSVDMSGRN--------FGDEGLFFLAESLGYNQTAEE 194
           +GK+ +E+ Q  +         SS +M+ R          GD     ++E+L  N T  +
Sbjct: 13  SGKMLQEANQPAH--------LSSENMTRRQRELFLDQQIGDAEAQAISEALKVNTTLTQ 64

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
                N I  AG  A    L+ N  L  + L  N IGD G + + + L  N  ++ L L 
Sbjct: 65  FGMGTNQIGDAGATAIAEALKVNGKLYWVELEDNQIGDAGAQAIAEALRVNTTLKYLILY 124

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +  + D GA+AIAE LK N  L  L L+ N I  +G  ++AEAL  N+     +LN N  
Sbjct: 125 ANRIGDAGAQAIAEALKVNKTLTSLRLSKNQIGDAGAQAIAEALKVNT-----NLNCNCI 179

Query: 315 GALGANALAKG 325
           G  GA AL K 
Sbjct: 180 GKAGAQALNKA 190



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 3/100 (3%)

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           QIG + A+ +++ L+ N T++   +  N + D GA  +A++ K VN  L  ++L  N+I 
Sbjct: 43  QIGDAEAQAISEALKVNTTLTQFGMGTNQIGDAGATAIAEALK-VNGKLYWVELEDNQIG 101

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           D GA AIA+AL+ N    +  L L  N +   G  A+ +A
Sbjct: 102 DAGAQAIAEALRVN--TTLKYLILYANRIGDAGAQAIAEA 139


>gi|290980851|ref|XP_002673145.1| predicted protein [Naegleria gruberi]
 gi|284086726|gb|EFC40401.1| predicted protein [Naegleria gruberi]
          Length = 468

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 172/361 (47%), Gaps = 74/361 (20%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ 215
           ++  EL+  + +D+S  N G EG  ++++     +    +   +N I   G K    + Q
Sbjct: 178 KYISELKQLTDLDISYNNIGTEGAKYISDL----KQLTTLDIESNNIGTEGAKYISELNQ 233

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI 275
               L+ LN+S + +GD+G + + ++      +  L +S   +R EGAK I+E+ +    
Sbjct: 234 ----LQVLNISYSSLGDKGAQYISEM----KQLTHLYISDSLIRSEGAKYISEMKQ---- 281

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L  L + NN ID  G                                AK +   K L +L
Sbjct: 282 LTNLFIENNDIDDEG--------------------------------AKHISTMKELTKL 309

Query: 336 HLHGNS-IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           ++ GN  I DEG + L     S    L VL IG+N I  +GA H++E     K+L  I +
Sbjct: 310 YMQGNRLISDEGAKYL-----SELKNLTVLFIGDNRIGNEGAKHLSE----LKNLTSIYV 360

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
              +IGDEGA+ +++  K    +T + +G N I ++GA  I+  LK+   +T L + YN 
Sbjct: 361 SYTEIGDEGAKYLSELNK----LTILQIGYNGIGAEGAKHISN-LKE---LTMLKIQYNN 412

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           IG +GAK +SE+ +    +  L + +  IG  GA++++ M +    ++ L++  N   +E
Sbjct: 413 IGNEGAKYISELKQ----LTDLDISYNNIGTEGADYLSQMKQ----LTHLEIETNSDAEE 464

Query: 515 G 515
           G
Sbjct: 465 G 465



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 192/387 (49%), Gaps = 57/387 (14%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAE--SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSN 217
           E++  +++ ++  N G EG  FL E  +L Y      ++ + N I   G K    + Q  
Sbjct: 134 EMKQLTNLYVNANNIGTEGAKFLRELKNLTY------LNISENDIGVEGAKYISELKQ-- 185

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
             L  L++S N IG EG K + D+      +  L + S ++  EGAK I+EL    + L+
Sbjct: 186 --LTDLDISYNNIGTEGAKYISDL----KQLTTLDIESNNIGTEGAKYISEL----NQLQ 235

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           VL ++ + +   G    A+ + E   +  L+++ +   + GA  +++     K L  L +
Sbjct: 236 VLNISYSSLGDKG----AQYISEMKQLTHLYISDSLIRSEGAKYISEM----KQLTNLFI 287

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
             N I DEG + +    S+ K    +   GN  IS +GA    +Y+   K+L  + +  N
Sbjct: 288 ENNDIDDEGAKHI----STMKELTKLYMQGNRLISDEGA----KYLSELKNLTVLFIGDN 339

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            IG+EGA+ +++     + +T+I +    I  +GA  ++ + K    +T L + YN IGA
Sbjct: 340 RIGNEGAKHLSEL----KNLTSIYVSYTEIGDEGAKYLSELNK----LTILQIGYNGIGA 391

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
           +GAK +S + +    +  LK+ +  IG  GA++++++ +    ++ LD+  N +  EGA 
Sbjct: 392 EGAKHISNLKE----LTMLKIQYNNIGNEGAKYISELKQ----LTDLDISYNNIGTEGAD 443

Query: 518 CLAQSFKVVNEALTSIDLAFNEIRDDG 544
            L+Q      + LT +++  N   ++G
Sbjct: 444 YLSQM-----KQLTHLEIETNSDAEEG 465



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 146/294 (49%), Gaps = 71/294 (24%)

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRE------LHLHGNSIGDEGIRALMSGLSSR 357
           + SL ++ N  G    N +  G+EG K + E      L+++ N+IG EG + L      R
Sbjct: 106 VTSLEIDDNIEGTTNENGI--GVEGAKHVSEMKQLTNLYVNANNIGTEGAKFL------R 157

Query: 358 KGK-LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           + K L  L+I  N I  +GA    +YI   K L  +++  N+IG EGA+ I+D LKQ   
Sbjct: 158 ELKNLTYLNISENDIGVEGA----KYISELKQLTDLDISYNNIGTEGAKYISD-LKQ--- 209

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           +TT+D+  NNI ++GA  I+ +    + +  L+++Y+ +G  GA+ +SE+ +    +  L
Sbjct: 210 LTTLDIESNNIGTEGAKYISEL----NQLQVLNISYSSLGDKGAQYISEMKQ----LTHL 261

Query: 477 KLGWCQIGASGAEFVADMLRYNN--------------------TISILDLRANGL-RDEG 515
            +    I + GA+++++M +  N                     ++ L ++ N L  DEG
Sbjct: 262 YISDSLIRSEGAKYISEMKQLTNLFIENNDIDDEGAKHISTMKELTKLYMQGNRLISDEG 321

Query: 516 AKCLAQ----------SFKVVNEA---------LTSIDLAFNEIRDDGAFAIAQ 550
           AK L++            ++ NE          LTSI +++ EI D+GA  +++
Sbjct: 322 AKYLSELKNLTVLFIGDNRIGNEGAKHLSELKNLTSIYVSYTEIGDEGAKYLSE 375



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 121/219 (55%), Gaps = 35/219 (15%)

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMN--DIGDEGAEKIADALKQNRTITTIDLGGNN 426
           N I  +GA HV+E     K L   NLY+N  +IG EGA+     L++ + +T +++  N+
Sbjct: 122 NGIGVEGAKHVSE----MKQL--TNLYVNANNIGTEGAK----FLRELKNLTYLNISEND 171

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           I  +GA  I+ + +    +T LD++YN IG +GAK +S++ +    + TL +    IG  
Sbjct: 172 IGVEGAKYISELKQ----LTDLDISYNNIGTEGAKYISDLKQ----LTTLDIESNNIGTE 223

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
           GA++++++    N + +L++  + L D+GA+ +++      + LT + ++ + IR +GA 
Sbjct: 224 GAKYISEL----NQLQVLNISYSSLGDKGAQYISEM-----KQLTHLYISDSLIRSEGAK 274

Query: 547 AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
            I++  +      +T+L + NN +   G   ++  K+L 
Sbjct: 275 YISEMKQ------LTNLFIENNDIDDEGAKHISTMKELT 307


>gi|407410034|gb|EKF32625.1| hypothetical protein MOQ_003520 [Trypanosoma cruzi marinkellei]
          Length = 1079

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 201/466 (43%), Gaps = 55/466 (11%)

Query: 119 RPSKPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEG 178
           R + P+   +N      T   + F   + R++   L            +++    FGD+G
Sbjct: 295 RTNDPSCTSVNLQWEDDTERAAYFISPVLRDNTHLL-----------ELNLGNCGFGDKG 343

Query: 179 LFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCL 238
           +  LAE+L  N T   ++F  N IT+ G K     +  + +L+ +NL+GN I DE    L
Sbjct: 344 VELLAEALRLNTTIRVIAFPNNNITSRGAKKLFQCIIQHASLEEVNLAGNLINDEAAPSL 403

Query: 239 CDILVDNAGVERLQLSSVDLRDEGAKAIAE----LLKNNS--ILR--VLELNNN-----M 285
            + +  N  ++ + +++  +   G   I E    LL N S  ++R  V+E+  N      
Sbjct: 404 LNTIRLNGNLKNVNITNNFV---GTDYINEVEGLLLINQSPKMIRRLVVEIEANEPNLAS 460

Query: 286 IDYSGFTS-----------LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
           +  SG T            L +ALL N+T+ SL L+GN  G +G  ++A+ L  N  +  
Sbjct: 461 LSLSGGTGEEYYNDASVRLLCQALLLNATVTSLDLSGNIVGDIGVASIAEMLMTNSVITH 520

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L+L  NSI + G + L   L +    L  L++ NN+I  +G     E +K    L  I L
Sbjct: 521 LNLSDNSISNRGPQRLCVALRTNTS-LQELNLSNNAIHDEGVEDFPEMLKYNDRLTRIVL 579

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL---- 450
               +  E   KI  A   N+   TI              + R+  ++  +  +DL    
Sbjct: 580 DKTGVSKEMYSKIIKAADLNKEPKTI-----------KDIVYRLQSEDDTLRKMDLRREN 628

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRAN 509
              P+  +    L   LK    +  L L    IG  G + +  +L      I  L+L +N
Sbjct: 629 CSRPLDDESIGTLCVHLKGKSFVEGLLLQGNMIGTKGCQALGWLLAQEGCGIISLNLSSN 688

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            + DEG + L++SF   +  L ++ L+  E+   G  ++ + LK N
Sbjct: 689 PVDDEGLQELSKSFLTPHTKLETLVLSETEVTSAGINSLIEVLKIN 734



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 206/497 (41%), Gaps = 87/497 (17%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S      +G   LA  L    T EEV    N I  AG +AF  +       K  ++ 
Sbjct: 48  IDLSRNEITSKGAQLLARFLRITPTVEEVEIRENNIDNAGAEAFIRLYFDIQYPKLFDMD 107

Query: 227 GNPI-----------------------------GDE----GVKC------LCDILVDNA- 246
           GNP                               DE    G+        L    V N  
Sbjct: 108 GNPCSKAYVHNLALLAQGSSYSNEIRRGLLTREADELNLSGIDYNKLDPRLVTFYVQNVD 167

Query: 247 GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEA--LLENSTI 304
           G+ERL LS   L D GA  I  L+ + S L  L+L+NN I   G +   E   L  + TI
Sbjct: 168 GLERLVLSGCSLGDAGAGVIGALI-SQSTLTHLDLSNNGISDVGLSQFVEYSNLQNHPTI 226

Query: 305 RSLHLNGNYG-GALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSG---LSSRKG 359
            SL    N   G   A  L K L E N  +    L   S+  + +R++++    L+ +  
Sbjct: 227 SSLSFAQNIRIGNFSAQNLTKTLFEKNGKITFFDLSETSVTSK-VRSIINHECELNKQPH 285

Query: 360 KL--AVLDIGNNSISA------------KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAE 405
            L  AV+ I  N  S             + A+ ++  +++   LL +NL     GD+G E
Sbjct: 286 SLKEAVIGIRTNDPSCTSVNLQWEDDTERAAYFISPVLRDNTHLLELNLGNCGFGDKGVE 345

Query: 406 KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
            +A+AL+ N TI  I    NNI S+GA  + + +  ++ +  ++LA N I  + A +L  
Sbjct: 346 LLAEALRLNTTIRVIAFPNNNITSRGAKKLFQCIIQHASLEEVNLAGNLINDEAAPSLLN 405

Query: 466 VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS-----ILDLRANG---------- 510
            ++ +GN+  + +    +G      V  +L  N +       ++++ AN           
Sbjct: 406 TIRLNGNLKNVNITNNFVGTDYINEVEGLLLINQSPKMIRRLVVEIEANEPNLASLSLSG 465

Query: 511 ------LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
                   D   + L Q+  ++N  +TS+DL+ N + D G  +IA+ L  N    +T LN
Sbjct: 466 GTGEEYYNDASVRLLCQAL-LLNATVTSLDLSGNIVGDIGVASIAEMLMTNS--VITHLN 522

Query: 565 LANNFLTKFGQSALTDA 581
           L++N ++  G   L  A
Sbjct: 523 LSDNSISNRGPQRLCVA 539



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 209/514 (40%), Gaps = 91/514 (17%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             +S+D+SG   GD G+  +AE L  N     ++ + N I+  G +     L++N +L+ 
Sbjct: 489 TVTSLDLSGNIVGDIGVASIAEMLMTNSVITHLNLSDNSISNRGPQRLCVALRTNTSLQE 548

Query: 223 LNLSGNPIGDEGVKC----------LCDILVDNAGVERLQLSSV----DLRDEGAKAIAE 268
           LNLS N I DEGV+           L  I++D  GV +   S +    DL  E  K I +
Sbjct: 549 LNLSNNAIHDEGVEDFPEMLKYNDRLTRIVLDKTGVSKEMYSKIIKAADLNKE-PKTIKD 607

Query: 269 LL----KNNSILRVLELN----NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           ++      +  LR ++L     +  +D     +L   L   S +  L L GN  G  G  
Sbjct: 608 IVYRLQSEDDTLRKMDLRRENCSRPLDDESIGTLCVHLKGKSFVEGLLLQGNMIGTKGCQ 667

Query: 321 ALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           AL   L +    +  L+L  N + DEG++ L     +   KL  L +    +++ G   +
Sbjct: 668 ALGWLLAQEGCGIISLNLSSNPVDDEGLQELSKSFLTPHTKLETLVLSETEVTSAGINSL 727

Query: 380 AEYIKNCKSL--------------------LWIN---------------------LYMND 398
            E +K   SL                    L +N                     + + D
Sbjct: 728 IEVLKINTSLQQVFPPERVSADVFCAMNYELMVNAQPKLLKPLLARIDANENIPEVVLKD 787

Query: 399 ----IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
                 D   + +  +L +N  I ++DL  N +  +    +   L  +  I  +DL+YN 
Sbjct: 788 PQVPFTDSACQLLCASLVKNNYIVSLDLSHNRLTCESVPFLVEALSRSPAIRKVDLSYNG 847

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NTIS----ILDLRAN 509
           IG  G   L   L+ + ++ +L L   +I ++ A  + ++L  N  +I     +L  RA 
Sbjct: 848 IGVKGGMDLMLFLQQNDHVLSLDLKGNEISSATANAITELLSLNAGSIKLKRILLRHRAG 907

Query: 510 GLRDEGAKCLAQ--SFK-------------VVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
              DE      Q  ++K             + +  L ++DL  N I D G   IA  L+ 
Sbjct: 908 NFYDEMINLNGQDEAYKLNDNDIRLLCDVMIESPTLRAVDLGLNSITDLGCEMIADVLRQ 967

Query: 555 NEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEM 588
           N+ +   +L L  N + + G  AL +A  + +++
Sbjct: 968 NQQIE--ALYLDYNPIGEAGGEALYNALKINHQL 999



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 161/397 (40%), Gaps = 69/397 (17%)

Query: 172  RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL-QSNIALKTLNLSGNPI 230
            R   DE +  L   L      E +    N I   G +A   +L Q    + +LNLS NP+
Sbjct: 631  RPLDDESIGTLCVHLKGKSFVEGLLLQGNMIGTKGCQALGWLLAQEGCGIISLNLSSNPV 690

Query: 231  GDEGVKCLC-DILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS--------------- 274
             DEG++ L    L  +  +E L LS  ++   G  ++ E+LK N+               
Sbjct: 691  DDEGLQELSKSFLTPHTKLETLVLSETEVTSAGINSLIEVLKINTSLQQVFPPERVSADV 750

Query: 275  -------------------ILRVLELNNNMIDY-----------SGFTSLAEALLENSTI 304
                               +L  ++ N N+ +            S    L  +L++N+ I
Sbjct: 751  FCAMNYELMVNAQPKLLKPLLARIDANENIPEVVLKDPQVPFTDSACQLLCASLVKNNYI 810

Query: 305  RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
             SL L+ N         L + L  + ++R++ L  N IG +G   LM  L      L+ L
Sbjct: 811  VSLDLSHNRLTCESVPFLVEALSRSPAIRKVDLSYNGIGVKGGMDLMLFLQQNDHVLS-L 869

Query: 365  DIGNNSISAKGAFHVAEY-------IKNCKSLL----------WINLYMND----IGDEG 403
            D+  N IS+  A  + E        IK  + LL           INL   D    + D  
Sbjct: 870  DLKGNEISSATANAITELLSLNAGSIKLKRILLRHRAGNFYDEMINLNGQDEAYKLNDND 929

Query: 404  AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
               + D + ++ T+  +DLG N+I   G   IA VL+ N  I +L L YNPIG  G +AL
Sbjct: 930  IRLLCDVMIESPTLRAVDLGLNSITDLGCEMIADVLRQNQQIEALYLDYNPIGEAGGEAL 989

Query: 464  SEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
               LK +  ++TL L    +     E +  +L  N T
Sbjct: 990  YNALKINHQLHTLFLEGSNVPEEIWEEILGLLHVNET 1026



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 122/497 (24%), Positives = 206/497 (41%), Gaps = 83/497 (16%)

Query: 134 AGTNLLSGFTGKLF-RESKQTLNEFAKELRA----FSSVDMSG----RNFGDEGLFFLAE 184
            GT+ ++   G L   +S + +     E+ A     +S+ +SG      + D  +  L +
Sbjct: 423 VGTDYINEVEGLLLINQSPKMIRRLVVEIEANEPNLASLSLSGGTGEEYYNDASVRLLCQ 482

Query: 185 SLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD 244
           +L  N T   +  + N +   G+ +   +L +N  +  LNLS N I + G + LC  L  
Sbjct: 483 ALLLNATVTSLDLSGNIVGDIGVASIAEMLMTNSVITHLNLSDNSISNRGPQRLCVALRT 542

Query: 245 NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID---YSGFTSLAEALLEN 301
           N  ++ L LS+  + DEG +   E+LK N  L  + L+   +    YS     A+   E 
Sbjct: 543 NTSLQELNLSNNAIHDEGVEDFPEMLKYNDRLTRIVLDKTGVSKEMYSKIIKAADLNKEP 602

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH----GNSIGDEGIRALMSGLSSR 357
            TI+ +              + +    + +LR++ L        + DE I  L   L   
Sbjct: 603 KTIKDI--------------VYRLQSEDDTLRKMDLRRENCSRPLDDESIGTLCVHL--- 645

Query: 358 KGKLAV--LDIGNNSISAKGAFHVAEYIKNCKSLLW-----------INLYMNDIGDEGA 404
           KGK  V  L +  N I  KG          C++L W           +NL  N + DEG 
Sbjct: 646 KGKSFVEGLLLQGNMIGTKG----------CQALGWLLAQEGCGIISLNLSSNPVDDEGL 695

Query: 405 EKIADA-LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP--IGADGAK 461
           ++++ + L  +  + T+ L    + S G +++  VLK N   TSL   + P  + AD   
Sbjct: 696 QELSKSFLTPHTKLETLVLSETEVTSAGINSLIEVLKIN---TSLQQVFPPERVSADVFC 752

Query: 462 ALSEVLKFHGNINTLKLGWCQIGA------------------SGAEFVADMLRYNNTISI 503
           A++  L  +     LK    +I A                  S  + +   L  NN I  
Sbjct: 753 AMNYELMVNAQPKLLKPLLARIDANENIPEVVLKDPQVPFTDSACQLLCASLVKNNYIVS 812

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           LDL  N L  E    L ++    + A+  +DL++N I   G   +   L+ N+   V SL
Sbjct: 813 LDLSHNRLTCESVPFLVEALS-RSPAIRKVDLSYNGIGVKGGMDLMLFLQQND--HVLSL 869

Query: 564 NLANNFLTKFGQSALTD 580
           +L  N ++    +A+T+
Sbjct: 870 DLKGNEISSATANAITE 886



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 13/202 (6%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L   K  + +   G  +GD  +  L++ +      +  +D+  N I++KGA  +A +++ 
Sbjct: 10  LVSKKGTKSVQWCGEKMGDTQLEILIAAMEISPIPIEHIDLSRNEITSKGAQLLARFLRI 69

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS-- 443
             ++  + +  N+I + GAE         +     D+ GN         +A + + +S  
Sbjct: 70  TPTVEEVEIRENNIDNAGAEAFIRLYFDIQYPKLFDMDGNPCSKAYVHNLALLAQGSSYS 129

Query: 444 ------VITSLDLAYNPIGADGAKALSEVLKFH-GNINTLK---LGWCQIGASGAEFVAD 493
                 ++T      N  G D  K    ++ F+  N++ L+   L  C +G +GA  +  
Sbjct: 130 NEIRRGLLTREADELNLSGIDYNKLDPRLVTFYVQNVDGLERLVLSGCSLGDAGAGVIGA 189

Query: 494 MLRYNNTISILDLRANGLRDEG 515
           ++   +T++ LDL  NG+ D G
Sbjct: 190 LIS-QSTLTHLDLSNNGISDVG 210


>gi|398010008|ref|XP_003858202.1| hypothetical protein, conserved [Leishmania donovani]
 gi|322496408|emb|CBZ31478.1| hypothetical protein, conserved [Leishmania donovani]
          Length = 441

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 175/384 (45%), Gaps = 57/384 (14%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           K +  VLQ       ++L+G  +G  G   +   L  N  V  L LS  +L D GA AIA
Sbjct: 28  KKWKSVLQET----RVDLAGRALGPRGALIVGTALFKNTYVTSLDLSQNELGDGGAIAIA 83

Query: 268 ELLKNNSILRVLEL-NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
            +L+ N+ L+ L L +N+M D  G  +LA A + N     +  +G  G            
Sbjct: 84  SMLRFNTQLQHLNLSHNDMTDIGGI-ALASAFIPN-----VSPSGQPG------------ 125

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKN 385
           + N++L  L L GN  GD+ + A MS  ++    L  +D+  N++   G   +   Y +N
Sbjct: 126 QWNRTLFSLVLMGNKFGDDTLLA-MSNAAACHRDLTRVDLSWNNVGQNGTKCLMRAYQRN 184

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQ--NRTITTIDLGGNNIHSKGASAIARVLKDNS 443
              L    L  N +GDEG   + +AL++   ++ TT++L  N+I   G  A+ R+L ++S
Sbjct: 185 --PLCVYQLAANALGDEGTVYLCEALQRYGGKSQTTLNLYRNSISCPGTEAVGRLLANSS 242

Query: 444 VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           ++  + LA N IG  G +AL   L                  + A  +A       ++ I
Sbjct: 243 IVQDVSLAGNTIGFKGVQALQRQL------------------TDAAVIASC-----SLRI 279

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           L+L  N + DEGA  +A   K    +L  +D++ N+I D GA AI  A   N     T L
Sbjct: 280 LNLSNNWIGDEGAASVAAIIKANIPSLERLDVSENKITDVGATAIVTAALQN-----THL 334

Query: 564 NLANNFLTKFGQSALTDAKDLVYE 587
            L N      G  A+     L++E
Sbjct: 335 LLLNCEANCLGSKAVDAVVRLIHE 358



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 147/319 (46%), Gaps = 19/319 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA---- 219
            +S+D+S    GD G   +A  L +N   + ++ + N +T  G  A       N++    
Sbjct: 64  VTSLDLSQNELGDGGAIAIASMLRFNTQLQHLNLSHNDMTDIGGIALASAFIPNVSPSGQ 123

Query: 220 -------LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
                  L +L L GN  GD+ +  + +    +  + R+ LS  ++   G K +    + 
Sbjct: 124 PGQWNRTLFSLVLMGNKFGDDTLLAMSNAAACHRDLTRVDLSWNNVGQNGTKCLMRAYQR 183

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLE--NSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           N +  V +L  N +   G   L EAL      +  +L+L  N     G  A+ + L  + 
Sbjct: 184 NPLC-VYQLAANALGDEGTVYLCEALQRYGGKSQTTLNLYRNSISCPGTEAVGRLLANSS 242

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSS----RKGKLAVLDIGNNSISAKGAFHVAEYIK-N 385
            ++++ L GN+IG +G++AL   L+         L +L++ NN I  +GA  VA  IK N
Sbjct: 243 IVQDVSLAGNTIGFKGVQALQRQLTDAAVIASCSLRILNLSNNWIGDEGAASVAAIIKAN 302

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             SL  +++  N I D GA  I  A  QN  +  ++   N + SK   A+ R++ +   +
Sbjct: 303 IPSLERLDVSENKITDVGATAIVTAALQNTHLLLLNCEANCLGSKAVDAVVRLIHETRTL 362

Query: 446 TSLDLAYNPIGADGAKALS 464
           TSL++A     AD  + L+
Sbjct: 363 TSLNVAGCVNSADHRRTLT 381



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 135/319 (42%), Gaps = 31/319 (9%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R   S+ + G  FGD+ L  ++ +   ++    V  + N +   G K      Q N  L 
Sbjct: 129 RTLFSLVLMGNKFGDDTLLAMSNAAACHRDLTRVDLSWNNVGQNGTKCLMRAYQRN-PLC 187

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVER--LQLSSVDLRDEGAKAIAELLKNNSILRVL 279
              L+ N +GDEG   LC+ L    G  +  L L    +   G +A+  LL N+SI++ +
Sbjct: 188 VYQLAANALGDEGTVYLCEALQRYGGKSQTTLNLYRNSISCPGTEAVGRLLANSSIVQDV 247

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L  N I + G  +L   L + + I S                        SLR L+L  
Sbjct: 248 SLAGNTIGFKGVQALQRQLTDAAVIASC-----------------------SLRILNLSN 284

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG  ++ + + +    L  LD+  N I+  GA  +         LL +N   N +
Sbjct: 285 NWIGDEGAASVAAIIKANIPSLERLDVSENKITDVGATAIVTAALQNTHLLLLNCEANCL 344

Query: 400 GDEGAEKIADALKQNRTITTIDLGG--NNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           G +  + +   + + RT+T++++ G  N+   +    IA    D      ++L  NP  A
Sbjct: 345 GSKAVDAVVRLIHETRTLTSLNVAGCVNSADHRRTLTIAVGETDG---LHVELGPNPEDA 401

Query: 458 DGAKALSEVLKFHGNINTL 476
            GA+  + + K   ++  L
Sbjct: 402 AGAEGTALIEKITEHLQML 420



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 17/221 (7%)

Query: 373 AKGAFHVAEYIKN-CKSLLW---INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           AKG      Y K   KS+L    ++L    +G  GA  +  AL +N  +T++DL  N + 
Sbjct: 16  AKGEKSTCFYTKKKWKSVLQETRVDLAGRALGPRGALIVGTALFKNTYVTSLDLSQNELG 75

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-----------KFHGNINTLK 477
             GA AIA +L+ N+ +  L+L++N +   G  AL+              +++  + +L 
Sbjct: 76  DGGAIAIASMLRFNTQLQHLNLSHNDMTDIGGIALASAFIPNVSPSGQPGQWNRTLFSLV 135

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           L   + G      +++    +  ++ +DL  N +   G KCL ++++     L    LA 
Sbjct: 136 LMGNKFGDDTLLAMSNAAACHRDLTRVDLSWNNVGQNGTKCLMRAYQ--RNPLCVYQLAA 193

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           N + D+G   + +AL+     + T+LNL  N ++  G  A+
Sbjct: 194 NALGDEGTVYLCEALQRYGGKSQTTLNLYRNSISCPGTEAV 234


>gi|281337796|gb|EFB13380.1| hypothetical protein PANDA_005693 [Ailuropoda melanoleuca]
          Length = 376

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 27/219 (12%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N +S  GA++ A  ++    L ++NL  NDIG EG E IA AL +N T+  + + 
Sbjct: 75  LDVRYNLLSDVGAYYAARLLQKQHKLTYLNLMFNDIGPEGGELIAKALHKNTTLKYLRMT 134

Query: 424 GNNIHSKGASAIA---------------------------RVLKDNSVITSLDLAYNPIG 456
           GN I +KG    A                            +LK+N  +  L L  + I 
Sbjct: 135 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLEESTVHLGHMLKENHCLVELHLCKHNIK 194

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
             G K L + L  + ++  L +   +I   G   +AD+L+ N T+ +LDL  N + + GA
Sbjct: 195 NCGMKQLCDALYLNRSLRYLDVSCNRITHDGMMCLADVLKSNTTLEVLDLSFNRIENAGA 254

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           K L+++    N +L ++ +  N I  +G  A++Q++K N
Sbjct: 255 KYLSETLASHNRSLRALSVVSNNIEGEGLVALSQSMKTN 293



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 136/309 (44%), Gaps = 40/309 (12%)

Query: 222 TLNLSGNP-------IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           TLN++GN        +  E    L  IL  N  +  L +    L D GA   A LL+   
Sbjct: 39  TLNIAGNSCLLPEERVTGEDFWILFRILKKNPHINGLDVRYNLLSDVGAYYAARLLQKQH 98

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L L  N I   G   +A+AL +N+T++ L + GN     G    A  L+ N SL +
Sbjct: 99  KLTYLNLMFNDIGPEGGELIAKALHKNTTLKYLRMTGNKIENKGGMFFAAMLQINSSLEK 158

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
                                        LD+G+  +  +   H+   +K    L+ ++L
Sbjct: 159 -----------------------------LDLGDCDLE-ESTVHLGHMLKENHCLVELHL 188

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             ++I + G +++ DAL  NR++  +D+  N I   G   +A VLK N+ +  LDL++N 
Sbjct: 189 CKHNIKNCGMKQLCDALYLNRSLRYLDVSCNRITHDGMMCLADVLKSNTTLEVLDLSFNR 248

Query: 455 IGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
           I   GAK LSE L  H  ++  L +    I   G   ++  ++ N T S + +  N   D
Sbjct: 249 IENAGAKYLSETLASHNRSLRALSVVSNNIEGEGLVALSQSMKTNPTFSNVYIWGNKF-D 307

Query: 514 EGAKCLAQS 522
           E A C+A S
Sbjct: 308 E-ATCMAYS 315



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 123/258 (47%), Gaps = 3/258 (1%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +L+ N  +  L++  N + D G      +L     +  L L   D+  EG + IA+ L  
Sbjct: 65  ILKKNPHINGLDVRYNLLSDVGAYYAARLLQKQHKLTYLNLMFNDIGPEGGELIAKALHK 124

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N+ L+ L +  N I+  G    A  L  NS++  L L G+         L   L+ N  L
Sbjct: 125 NTTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDL-GDCDLEESTVHLGHMLKENHCL 183

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            ELHL  ++I + G++ L   L   +  L  LD+  N I+  G   +A+ +K+  +L  +
Sbjct: 184 VELHLCKHNIKNCGMKQLCDALYLNRS-LRYLDVSCNRITHDGMMCLADVLKSNTTLEVL 242

Query: 393 NLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           +L  N I + GA+ +++ L   NR++  + +  NNI  +G  A+++ +K N   +++ + 
Sbjct: 243 DLSFNRIENAGAKYLSETLASHNRSLRALSVVSNNIEGEGLVALSQSMKTNPTFSNVYIW 302

Query: 452 YNPIGADGAKALSEVLKF 469
            N        A S++++ 
Sbjct: 303 GNKFDEATCMAYSDLIQM 320



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 1/249 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+      D G ++ A  L        ++   N I   G +     L  N  LK L ++
Sbjct: 75  LDVRYNLLSDVGAYYAARLLQKQHKLTYLNLMFNDIGPEGGELIAKALHKNTTLKYLRMT 134

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
           GN I ++G      +L  N+ +E+L L   DL +E    +  +LK N  L  L L  + I
Sbjct: 135 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDL-EESTVHLGHMLKENHCLVELHLCKHNI 193

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G   L +AL  N ++R L ++ N     G   LA  L+ N +L  L L  N I + G
Sbjct: 194 KNCGMKQLCDALYLNRSLRYLDVSCNRITHDGMMCLADVLKSNTTLEVLDLSFNRIENAG 253

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            + L   L+S    L  L + +N+I  +G   +++ +K   +   + ++ N   +     
Sbjct: 254 AKYLSETLASHNRSLRALSVVSNNIEGEGLVALSQSMKTNPTFSNVYIWGNKFDEATCMA 313

Query: 407 IADALKQNR 415
            +D ++  R
Sbjct: 314 YSDLIQMGR 322



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 4/181 (2%)

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           DE  EK ++ +  N    +  L    +  +    + R+LK N  I  LD+ YN +   GA
Sbjct: 28  DEEIEKGSEGITLNIAGNSCLLPEERVTGEDFWILFRILKKNPHINGLDVRYNLLSDVGA 87

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
              + +L+    +  L L +  IG  G E +A  L  N T+  L +  N + ++G    A
Sbjct: 88  YYAARLLQKQHKLTYLNLMFNDIGPEGGELIAKALHKNTTLKYLRMTGNKIENKGGMFFA 147

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
              + +N +L  +DL   ++ ++    +   LK N    +  L+L  + +   G   L D
Sbjct: 148 AMLQ-INSSLEKLDLGDCDL-EESTVHLGHMLKENH--CLVELHLCKHNIKNCGMKQLCD 203

Query: 581 A 581
           A
Sbjct: 204 A 204



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 7/185 (3%)

Query: 147 FRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
             ES   L    KE      + +   N  + G+  L ++L  N++   +  + N IT  G
Sbjct: 166 LEESTVHLGHMLKENHCLVELHLCKHNIKNCGMKQLCDALYLNRSLRYLDVSCNRITHDG 225

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILV-DNAGVERLQLSSVDLRDEGAKA 265
           +     VL+SN  L+ L+LS N I + G K L + L   N  +  L + S ++  EG  A
Sbjct: 226 MMCLADVLKSNTTLEVLDLSFNRIENAGAKYLSETLASHNRSLRALSVVSNNIEGEGLVA 285

Query: 266 IAELLKNNSILRVLELNNNMID------YSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           +++ +K N     + +  N  D      YS    +     +N+ +    ++GN   A   
Sbjct: 286 LSQSMKTNPTFSNVYIWGNKFDEATCMAYSDLIQMGRLKPDNTDVEPFVVDGNVYLAEVY 345

Query: 320 NALAK 324
           N L K
Sbjct: 346 NGLKK 350


>gi|241626364|ref|XP_002407907.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215501083|gb|EEC10577.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 450

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 143/300 (47%), Gaps = 10/300 (3%)

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEG 328
           L+ N+ +R + ++  MI  +   SL  A+   + T+  LH            AL K +  
Sbjct: 140 LRPNAGIRQIVVSGAMICDAELNSLVRAMFRADPTVLRLH--QFVFSRFEITALCKAITT 197

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
              L ++ L  N +       LM+ L +   K   +D   N+I  +GA   AE +K  K+
Sbjct: 198 PSRLTDVELCENGMKSSDTIELMAALETSSVKCIKIDF--NNIGIRGAQRFAELLKKNKT 255

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
           LL ++L+   + D+GA  IA AL  N T+  + +GGN+I   GA A+A  L+ NS + +L
Sbjct: 256 LLRVSLFKTKLKDKGAVAIAGALATNDTLQHLMMGGNSITLTGAKALASSLEANSCLLTL 315

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           DL  N +G +GA + + +L  +  +  L L    IG  G   +AD L  N T+  L + A
Sbjct: 316 DLRDNYLGTNGAISFARMLLLNQTLQELYLCGNSIGDEGVVAIADSLAANETLHTLSIHA 375

Query: 509 NGLRDEGAKCLAQ---SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
           +   D G   LA+   S + + +  ++   + NE      F  A+AL  N+ + V  L+ 
Sbjct: 376 SNFGDSGVAALARLLSSNRTLIKLNSTCKPSLNEATHFDVF--AEALATNQRLEVIELSF 433



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 121/231 (52%), Gaps = 4/231 (1%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           +V    NG+ ++        L+++ ++K + +  N IG  G +   ++L  N  + R+ L
Sbjct: 203 DVELCENGMKSSDTIELMAALETS-SVKCIKIDFNNIGIRGAQRFAELLKKNKTLLRVSL 261

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               L+D+GA AIA  L  N  L+ L +  N I  +G  +LA +L  NS + +L L  NY
Sbjct: 262 FKTKLKDKGAVAIAGALATNDTLQHLMMGGNSITLTGAKALASSLEANSCLLTLDLRDNY 321

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISA 373
            G  GA + A+ L  N++L+EL+L GNSIGDEG+ A+   L++ +  L  L I  ++   
Sbjct: 322 LGTNGAISFARMLLLNQTLQELYLCGNSIGDEGVVAIADSLAANE-TLHTLSIHASNFGD 380

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGA--EKIADALKQNRTITTIDL 422
            G   +A  + + ++L+ +N       +E    +  A+AL  N+ +  I+L
Sbjct: 381 SGVAALARLLSSNRTLIKLNSTCKPSLNEATHFDVFAEALATNQRLEVIEL 431



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 142/317 (44%), Gaps = 35/317 (11%)

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
           S+ D R      +A+L+ N+  ++ ++L      + G + +   L  N+ IR + ++G  
Sbjct: 96  SATDYRAVCVNLVAKLINNHRCVQCVDLGYVGELFGGNSWVLRRLRPNAGIRQIVVSGAM 155

Query: 314 GGALGANALAKGL-EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
                 N+L + +   + ++  L LH        I AL   +++   +L  +++  N + 
Sbjct: 156 ICDAELNSLVRAMFRADPTV--LRLHQFVFSRFEITALCKAITT-PSRLTDVELCENGMK 212

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
           +     +   ++   S+  I +  N+IG  GA++ A+ LK+N+T+  + L    +  KGA
Sbjct: 213 SSDTIELMAALET-SSVKCIKIDFNNIGIRGAQRFAELLKKNKTLLRVSLFKTKLKDKGA 271

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
            AIA  L  N  +  L +  N I   GAKAL                            A
Sbjct: 272 VAIAGALATNDTLQHLMMGGNSITLTGAKAL----------------------------A 303

Query: 493 DMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
             L  N+ +  LDLR N L   GA   A+   ++N+ L  + L  N I D+G  AIA +L
Sbjct: 304 SSLEANSCLLTLDLRDNYLGTNGAISFARML-LLNQTLQELYLCGNSIGDEGVVAIADSL 362

Query: 553 KANEDVAVTSLNLANNF 569
            ANE +   S++ A+NF
Sbjct: 363 AANETLHTLSIH-ASNF 378



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 6/190 (3%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q   E  K+ +    V +      D+G   +A +L  N T + +    N IT  G KA  
Sbjct: 244 QRFAELLKKNKTLLRVSLFKTKLKDKGAVAIAGALATNDTLQHLMMGGNSITLTGAKALA 303

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L++N  L TL+L  N +G  G      +L+ N  ++ L L    + DEG  AIA+ L 
Sbjct: 304 SSLEANSCLLTLDLRDNYLGTNGAISFARMLLLNQTLQELYLCGNSIGDEGVVAIADSLA 363

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA----NALAKGLE 327
            N  L  L ++ +    SG  +LA  L  N T+  + LN     +L      +  A+ L 
Sbjct: 364 ANETLHTLSIHASNFGDSGVAALARLLSSNRTL--IKLNSTCKPSLNEATHFDVFAEALA 421

Query: 328 GNKSLRELHL 337
            N+ L  + L
Sbjct: 422 TNQRLEVIEL 431



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 81/178 (45%)

Query: 158 AKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSN 217
           A E  +   + +   N G  G    AE L  N+T   VS     +   G  A  G L +N
Sbjct: 222 ALETSSVKCIKIDFNNIGIRGAQRFAELLKKNKTLLRVSLFKTKLKDKGAVAIAGALATN 281

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
             L+ L + GN I   G K L   L  N+ +  L L    L   GA + A +L  N  L+
Sbjct: 282 DTLQHLMMGGNSITLTGAKALASSLEANSCLLTLDLRDNYLGTNGAISFARMLLLNQTLQ 341

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
            L L  N I   G  ++A++L  N T+ +L ++ +  G  G  ALA+ L  N++L +L
Sbjct: 342 ELYLCGNSIGDEGVVAIADSLAANETLHTLSIHASNFGDSGVAALARLLSSNRTLIKL 399


>gi|357139672|ref|XP_003571403.1| PREDICTED: RAN GTPase-activating protein 1-like [Brachypodium
           distachyon]
          Length = 539

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 165/360 (45%), Gaps = 37/360 (10%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFF---LAESLGYNQTAEEVS-FAANGITA 204
           E+K+ L    K   ++  +  S R+FG +       + ES+    T  ++S F A     
Sbjct: 136 EAKELLIPLTKPGNSYKRICFSNRSFGIDAANVAGPILESIKKQITEVDISDFVAGRPED 195

Query: 205 AGI---KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
             +   + F   L+ ++ L+ LN+S N +G++GV+   ++L     +E   + +  + +E
Sbjct: 196 EALDVMRIFSKALEGSV-LRYLNISDNALGEKGVRAFEELLKSQDNLEEFSVMNDGISEE 254

Query: 262 GAKAIAELLKNNSILRVLELNNNM----------------------------IDYSGFTS 293
            AKA++EL+ +  IL+VL  +NNM                            I   G  +
Sbjct: 255 AAKALSELIPSTEILKVLHFHNNMTGDEGALSIAEMVKRSSNLESFRCSATRIGSDGGVA 314

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           LAEAL   + ++ L L  N  G     AL+K L     L EL+L   ++ ++G  A+ + 
Sbjct: 315 LAEALGTCTRLKKLDLRDNLFGVEAGIALSKTLPKLPDLVELYLSDLNLENKGTIAIANA 374

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
           L     +L VL++  N I+AK    +AE +   +SL  + L  N++ D GA  IA  L+ 
Sbjct: 375 LKQSAPRLEVLEMAGNEITAKATQALAECLTVMQSLKKLTLAENELEDRGAVVIAKTLEN 434

Query: 414 NRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
           +   +  +D+  N +   GA   A+ + D      L++  N I  +G + + ++LK   N
Sbjct: 435 SHPDLKELDVSTNMLRRAGARCFAQAIADKPGFVQLNINGNFISDEGIEEVKKILKSGKN 494



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 131/261 (50%), Gaps = 5/261 (1%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +K LEG+  LR L++  N++G++G+RA    L S+   L    + N+ IS + A  ++E
Sbjct: 204 FSKALEGS-VLRYLNISDNALGEKGVRAFEELLKSQDN-LEEFSVMNDGISEEAAKALSE 261

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I + + L  ++ + N  GDEGA  IA+ +K++  + +       I S G  A+A  L  
Sbjct: 262 LIPSTEILKVLHFHNNMTGDEGALSIAEMVKRSSNLESFRCSATRIGSDGGVALAEALGT 321

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT- 500
            + +  LDL  N  G +   ALS+ L    ++  L L    +   G   +A+ L+ +   
Sbjct: 322 CTRLKKLDLRDNLFGVEAGIALSKTLPKLPDLVELYLSDLNLENKGTIAIANALKQSAPR 381

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           + +L++  N +  +  + LA+   V+ ++L  + LA NE+ D GA  IA+ L+ N    +
Sbjct: 382 LEVLEMAGNEITAKATQALAECLTVM-QSLKKLTLAENELEDRGAVVIAKTLE-NSHPDL 439

Query: 561 TSLNLANNFLTKFGQSALTDA 581
             L+++ N L + G      A
Sbjct: 440 KELDVSTNMLRRAGARCFAQA 460



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 132/303 (43%), Gaps = 31/303 (10%)

Query: 144 GKLFRESKQTLNEFAKELR--AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANG 201
           G+   E+   +  F+K L       +++S    G++G+    E L      EE S   +G
Sbjct: 191 GRPEDEALDVMRIFSKALEGSVLRYLNISDNALGEKGVRAFEELLKSQDNLEEFSVMNDG 250

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I+    KA   ++ S   LK L+   N  GDEG   + +++  ++ +E  + S+  +  +
Sbjct: 251 ISEEAAKALSELIPSTEILKVLHFHNNMTGDEGALSIAEMVKRSSNLESFRCSATRIGSD 310

Query: 262 GAKAIAELLKNNSILRVLELNNNM----------------------------IDYSGFTS 293
           G  A+AE L   + L+ L+L +N+                            ++  G  +
Sbjct: 311 GGVALAEALGTCTRLKKLDLRDNLFGVEAGIALSKTLPKLPDLVELYLSDLNLENKGTIA 370

Query: 294 LAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           +A AL +++  +  L + GN   A    ALA+ L   +SL++L L  N + D G   +  
Sbjct: 371 IANALKQSAPRLEVLEMAGNEITAKATQALAECLTVMQSLKKLTLAENELEDRGAVVIAK 430

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L +    L  LD+  N +   GA   A+ I +    + +N+  N I DEG E++   LK
Sbjct: 431 TLENSHPDLKELDVSTNMLRRAGARCFAQAIADKPGFVQLNINGNFISDEGIEEVKKILK 490

Query: 413 QNR 415
             +
Sbjct: 491 SGK 493



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 99/246 (40%), Gaps = 30/246 (12%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E+ + L+E          +       GDEG   +AE +  +   E    +A  I + G  
Sbjct: 254 EAAKALSELIPSTEILKVLHFHNNMTGDEGALSIAEMVKRSSNLESFRCSATRIGSDGGV 313

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
           A    L +   LK L+L  N  G E    L   L     +  L LS ++L ++G  AIA 
Sbjct: 314 ALAEALGTCTRLKKLDLRDNLFGVEAGIALSKTLPKLPDLVELYLSDLNLENKGTIAIAN 373

Query: 269 LLKNNSI-LRVLELNNNMIDYSGFTSLAEAL---------------------------LE 300
            LK ++  L VLE+  N I      +LAE L                           LE
Sbjct: 374 ALKQSAPRLEVLEMAGNEITAKATQALAECLTVMQSLKKLTLAENELEDRGAVVIAKTLE 433

Query: 301 NS--TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           NS   ++ L ++ N     GA   A+ +       +L+++GN I DEGI  +   L S K
Sbjct: 434 NSHPDLKELDVSTNMLRRAGARCFAQAIADKPGFVQLNINGNFISDEGIEEVKKILKSGK 493

Query: 359 GKLAVL 364
             L+VL
Sbjct: 494 NSLSVL 499


>gi|398024794|ref|XP_003865558.1| hypothetical protein, conserved [Leishmania donovani]
 gi|322503795|emb|CBZ38881.1| hypothetical protein, conserved [Leishmania donovani]
          Length = 1123

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 116/520 (22%), Positives = 209/520 (40%), Gaps = 118/520 (22%)

Query: 154  LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            L ++  + R    +++S    G+ G   L ++L  NQ  + +  + N + A  + A   V
Sbjct: 553  LADYLADNRTMLELNLSSCTIGNRGAQNLCKALATNQALQSLDLSNNMMDADSLSALPLV 612

Query: 214  LQSNIALKTLNLSGNPIGDE---GVKCLCDILVDNAGVERL--------------QLSSV 256
            L+ N AL+   L    +  E    VK  C +  + A V+R+              +LSS 
Sbjct: 613  LRENTALREFKLERTRVASEFVEQVKMACSLNRERAAVKRIYYRLHDGDASLTKIELSSP 672

Query: 257  D----LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS---------- 302
            D    + D+    I  +L+NN+ + V++L+ N+I  +G ++LA  L E +          
Sbjct: 673  DEERVIDDQTVSTICTVLRNNTSVEVIDLSGNVIGKNGCSALAATLSECTSKVRKIILSK 732

Query: 303  -------------------TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
                               T+R + L       +G  ALAKGLE N S+  + +  +   
Sbjct: 733  NPIDDDAAAELAACFPKIKTLREVILYNTNITKIGMEALAKGLEENASIVWIGITDDDTA 792

Query: 344  DEGIRALMSGLSSRKGKLAV---------------------------------------- 363
            DE +  LM  L+   G  A+                                        
Sbjct: 793  DENVSLLMRNLALNNGPAALKRITLSIDAGVIVDDVDLSRPVDCSMDDSLCKFLCASLVR 852

Query: 364  ------LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTI 417
                  L++ +N IS+    ++ E ++ C SL  ++L  N I + GA++I   L++   +
Sbjct: 853  CPTLRSLNLAHNEISSAAVPYILEVVEMCPSLASLDLSGNQIDESGAQQIIACLERVSNL 912

Query: 418  TTIDLGGNNIHSKGASAIAR---------VLKDNSVITSL-DLAYNPIGADGAK------ 461
             +++  GN   ++    +++         VLK   + T+  D   N I  +G        
Sbjct: 913  RSVNFAGNLFSAESLERVSQLVALNMGSEVLKKLYLTTTRGDQLPNDIDLNGTTNSYRLT 972

Query: 462  -----ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
                  L+ +L+    + +L LG    G  G   +A++LR+N+TI  L+L  N +  +G 
Sbjct: 973  DEEVVVLAGLLQNSSTVKSLDLGSNSFGDEGCIAIAEVLRFNHTIEALNLAGNAIGSKGG 1032

Query: 517  KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            + L  + K +N  L  +DL    I  D   +I+  L  N+
Sbjct: 1033 EALYFALK-INPQLQHLDLEKTAIPRDVLESISSLLHVNQ 1071



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 161/343 (46%), Gaps = 43/343 (12%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL-KTLNL 225
           +++S     D GL  LAE+L  N + + +  A   ITA GI+    VLQ  I L + +N+
Sbjct: 377 LNISNSLIDDAGLELLAEALQKNTSLKVIELANCRITATGIQKLFAVLQKGICLVQEVNI 436

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLS-SVDLRDEGAKAIAELLKNN-------SILR 277
           + N + +  V+ +   L  N  ++ L ++ +  +     + IA L   N       S+L 
Sbjct: 437 ANNNLDEGSVQYITAALRANPRLKTLNINVNPAISPASMQEIAGLTMVNRAPPQIRSVLP 496

Query: 278 VLELNNN---MIDYSG---------FTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           ++E N+    ++D+SG            LA+AL  NST+R L+L+ N  G  GA+ LA  
Sbjct: 497 LIENNSKDVVVLDFSGKGVTLDDDSVWLLAQALRLNSTVRQLNLSHNSFGDTGASYLADY 556

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L  N+++ EL+L   +IG+ G + L   L++ +  L  LD+ NN + A     +   ++ 
Sbjct: 557 LADNRTMLELNLSSCTIGNRGAQNLCKALATNQA-LQSLDLSNNMMDADSLSALPLVLRE 615

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNR-----------------TITTIDLGGNN-- 426
             +L    L    +  E  E++  A   NR                 ++T I+L   +  
Sbjct: 616 NTALREFKLERTRVASEFVEQVKMACSLNRERAAVKRIYYRLHDGDASLTKIELSSPDEE 675

Query: 427 --IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
             I  +  S I  VL++N+ +  +DL+ N IG +G  AL+  L
Sbjct: 676 RVIDDQTVSTICTVLRNNTSVEVIDLSGNVIGKNGCSALAATL 718



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 156/344 (45%), Gaps = 39/344 (11%)

Query: 190  QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN---A 246
            +T  EV      IT  G++A    L+ N ++  + ++ +   DE V  L   L  N   A
Sbjct: 751  KTLREVILYNTNITKIGMEALAKGLEENASIVWIGITDDDTADENVSLLMRNLALNNGPA 810

Query: 247  GVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRS 306
             ++R+ LS     D G      ++ +  + R ++ +   +D S    L  +L+   T+RS
Sbjct: 811  ALKRITLSI----DAGV-----IVDDVDLSRPVDCS---MDDSLCKFLCASLVRCPTLRS 858

Query: 307  LHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
            L+L  N   +     + + +E   SL  L L GN I + G + +++ L  R   L  ++ 
Sbjct: 859  LNLAHNEISSAAVPYILEVVEMCPSLASLDLSGNQIDESGAQQIIACLE-RVSNLRSVNF 917

Query: 367  GNNSISAKGAFHVAEYIK-NCKSLLWINLYM---------NDIG-----------DEGAE 405
              N  SA+    V++ +  N  S +   LY+         NDI            DE   
Sbjct: 918  AGNLFSAESLERVSQLVALNMGSEVLKKLYLTTTRGDQLPNDIDLNGTTNSYRLTDEEVV 977

Query: 406  KIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
             +A  L+ + T+ ++DLG N+   +G  AIA VL+ N  I +L+LA N IG+ G +AL  
Sbjct: 978  VLAGLLQNSSTVKSLDLGSNSFGDEGCIAIAEVLRFNHTIEALNLAGNAIGSKGGEALYF 1037

Query: 466  VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI--SILDLR 507
             LK +  +  L L    I     E ++ +L  N T   +++D+R
Sbjct: 1038 ALKINPQLQHLDLEKTAIPRDVLESISSLLHVNQTPYRAVIDMR 1081



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 92/415 (22%), Positives = 175/415 (42%), Gaps = 45/415 (10%)

Query: 167 VDMSGR--NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           +D SG+     D+ ++ LA++L  N T  +++ + N     G       L  N  +  LN
Sbjct: 508 LDFSGKGVTLDDDSVWLLAQALRLNSTVRQLNLSHNSFGDTGASYLADYLADNRTMLELN 567

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS   IG+ G + LC  L  N  ++ L LS+  +  +   A+  +L+ N+ LR  +L   
Sbjct: 568 LSSCTIGNRGAQNLCKALATNQALQSLDLSNNMMDADSLSALPLVLRENTALREFKLERT 627

Query: 285 MI--DYSGFTSLAEAL-LENSTIRSLHLNGNYGGA------------------LGANALA 323
            +  ++     +A +L  E + ++ ++   + G A                     + + 
Sbjct: 628 RVASEFVEQVKMACSLNRERAAVKRIYYRLHDGDASLTKIELSSPDEERVIDDQTVSTIC 687

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L  N S+  + L GN IG  G  AL + LS    K+  + +  N I    A  +A   
Sbjct: 688 TVLRNNTSVEVIDLSGNVIGKNGCSALAATLSECTSKVRKIILSKNPIDDDAAAELAACF 747

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
              K+L  + LY  +I   G E +A  L++N +I  I +  ++   +  S + R L  N+
Sbjct: 748 PKIKTLREVILYNTNITKIGMEALAKGLEENASIVWIGITDDDTADENVSLLMRNLALNN 807

Query: 444 ----------------VITSLDLAYNPIGADG----AKALSEVLKFHGNINTLKLGWCQI 483
                           ++  +DL+  P+         K L   L     + +L L   +I
Sbjct: 808 GPAALKRITLSIDAGVIVDDVDLS-RPVDCSMDDSLCKFLCASLVRCPTLRSLNLAHNEI 866

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
            ++   ++ +++    +++ LDL  N + + GA+ +    + V+  L S++ A N
Sbjct: 867 SSAAVPYILEVVEMCPSLASLDLSGNQIDESGAQQIIACLERVSN-LRSVNFAGN 920



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 174/395 (44%), Gaps = 34/395 (8%)

Query: 192 AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
           A+EV+   +      +      + ++  ++ LN+S + I D G++ L + L  N  ++ +
Sbjct: 346 AQEVNLQWDAPLPMCMNYLVDYIAASSVIQHLNISNSLIDDAGLELLAEALQKNTSLKVI 405

Query: 252 QLSSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           +L++  +   G  K  A L K   +++ + + NN +D      +  AL  N  +++L++N
Sbjct: 406 ELANCRITATGIQKLFAVLQKGICLVQEVNIANNNLDEGSVQYITAALRANPRLKTLNIN 465

Query: 311 GNYGGALGANALAKGLEG-NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
            N   +  +     GL   N++  +            IR+++  + +    + VLD    
Sbjct: 466 VNPAISPASMQEIAGLTMVNRAPPQ------------IRSVLPLIENNSKDVVVLDFSGK 513

Query: 370 SISA--KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            ++      + +A+ ++   ++  +NL  N  GD GA  +AD L  NRT+  ++L    I
Sbjct: 514 GVTLDDDSVWLLAQALRLNSTVRQLNLSHNSFGDTGASYLADYLADNRTMLELNLSSCTI 573

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            ++GA  + + L  N  + SLDL+ N + AD   AL  VL+ +  +   KL   ++ +  
Sbjct: 574 GNRGAQNLCKALATNQALQSLDLSNNMMDADSLSALPLVLRENTALREFKLERTRVASEF 633

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE----IRDD 543
            E V      N   + +      L D  A            +LT I+L+  +    I D 
Sbjct: 634 VEQVKMACSLNRERAAVKRIYYRLHDGDA------------SLTKIELSSPDEERVIDDQ 681

Query: 544 GAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
               I   L+ N  V V  ++L+ N + K G SAL
Sbjct: 682 TVSTICTVLRNNTSVEV--IDLSGNVIGKNGCSAL 714



 Score = 38.9 bits (89), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 22/104 (21%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K +  +   G  + D  ++ L++ + +      ++D+ NNSI++ G  ++  Y+    S+
Sbjct: 61  KGVAHIKCAGLGLNDHQLQLLITAIENSPSHPEIIDVSNNSITSAGVVYLIRYLTT-ASV 119

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
             ++L  N I ++GA       ++  ++  +D+ GN   +  AS
Sbjct: 120 EAVDLRNNQIDEDGALTFFPLFEKKTSVKLLDVRGNPCSAATAS 163


>gi|301626026|ref|XP_002942200.1| PREDICTED: t-complex-associated testis-expressed protein 1-like
           [Xenopus (Silurana) tropicalis]
          Length = 460

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 103/196 (52%), Gaps = 2/196 (1%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK   L  + + D+    L   L+++  +  L LS   + D GA+AIA+LLK  S LRVL
Sbjct: 252 LKVFRLHKSKVDDDKACVLVRSLLNHPALVHLDLSHNQVSDRGARAIAKLLK-ESALRVL 310

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +L+NN +   G  +LA AL  N T+R+L L  N+ G  G  AL   L  N++L+ELHL  
Sbjct: 311 DLSNNNVGAHGAQALAHALTNNWTLRNLSLRLNHVGNEGGQALCNALLPNQTLQELHLGS 370

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N + +    AL   L +  G L  L +  N I   G   + E + + ++LL ++L + +I
Sbjct: 371 NELSEPTASALSQAL-THNGSLRRLSLACNRIGPDGGKQLLEGMSDNETLLELDLRLTEI 429

Query: 400 GDEGAEKIADALKQNR 415
           G E    I   LK NR
Sbjct: 430 GQESEFFINQVLKNNR 445



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 2/206 (0%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           SLA+AL     ++   L+ +      A  L + L  + +L  L L  N + D G RA+  
Sbjct: 241 SLAQALRVFRNLKVFRLHKSKVDDDKACVLVRSLLNHPALVHLDLSHNQVSDRGARAIAK 300

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L  ++  L VLD+ NN++ A GA  +A  + N  +L  ++L +N +G+EG + + +AL 
Sbjct: 301 LL--KESALRVLDLSNNNVGAHGAQALAHALTNNWTLRNLSLRLNHVGNEGGQALCNALL 358

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N+T+  + LG N +    ASA+++ L  N  +  L LA N IG DG K L E +  +  
Sbjct: 359 PNQTLQELHLGSNELSEPTASALSQALTHNGSLRRLSLACNRIGPDGGKQLLEGMSDNET 418

Query: 473 INTLKLGWCQIGASGAEFVADMLRYN 498
           +  L L   +IG     F+  +L+ N
Sbjct: 419 LLELDLRLTEIGQESEFFINQVLKNN 444



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 2/172 (1%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L ++ AL  L+LS N + D G + +  +L ++A +  L LS+ ++   GA+A+A  L NN
Sbjct: 274 LLNHPALVHLDLSHNQVSDRGARAIAKLLKESA-LRVLDLSNNNVGAHGAQALAHALTNN 332

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             LR L L  N +   G  +L  ALL N T++ LHL  N      A+AL++ L  N SLR
Sbjct: 333 WTLRNLSLRLNHVGNEGGQALCNALLPNQTLQELHLGSNELSEPTASALSQALTHNGSLR 392

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
            L L  N IG +G + L+ G+S  +  L  LD+    I  +  F + + +KN
Sbjct: 393 RLSLACNRIGPDGGKQLLEGMSDNETLLE-LDLRLTEIGQESEFFINQVLKN 443



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 2/206 (0%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            N+LA+ L   ++L+   LH + + D+    L+  L +    L  LD+ +N +S +GA  
Sbjct: 239 CNSLAQALRVFRNLKVFRLHKSKVDDDKACVLVRSLLNHPA-LVHLDLSHNQVSDRGARA 297

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A+ +K   +L  ++L  N++G  GA+ +A AL  N T+  + L  N++ ++G  A+   
Sbjct: 298 IAKLLKE-SALRVLDLSNNNVGAHGAQALAHALTNNWTLRNLSLRLNHVGNEGGQALCNA 356

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  N  +  L L  N +    A ALS+ L  +G++  L L   +IG  G + + + +  N
Sbjct: 357 LLPNQTLQELHLGSNELSEPTASALSQALTHNGSLRRLSLACNRIGPDGGKQLLEGMSDN 416

Query: 499 NTISILDLRANGLRDEGAKCLAQSFK 524
            T+  LDLR   +  E    + Q  K
Sbjct: 417 ETLLELDLRLTEIGQESEFFINQVLK 442



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 2/199 (1%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L V  +  + +    A  +   + N  +L+ ++L  N + D GA  IA  LK++  +  +
Sbjct: 252 LKVFRLHKSKVDDDKACVLVRSLLNHPALVHLDLSHNQVSDRGARAIAKLLKES-ALRVL 310

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           DL  NN+ + GA A+A  L +N  + +L L  N +G +G +AL   L  +  +  L LG 
Sbjct: 311 DLSNNNVGAHGAQALAHALTNNWTLRNLSLRLNHVGNEGGQALCNALLPNQTLQELHLGS 370

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            ++    A  ++  L +N ++  L L  N +  +G K L +     NE L  +DL   EI
Sbjct: 371 NELSEPTASALSQALTHNGSLRRLSLACNRIGPDGGKQLLEGMSD-NETLLELDLRLTEI 429

Query: 541 RDDGAFAIAQALKANEDVA 559
             +  F I Q LK N + A
Sbjct: 430 GQESEFFINQVLKNNRERA 448



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 12/217 (5%)

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            H+   ++NC      NL+     D     +A AL+  R +    L  + +    A  + 
Sbjct: 214 LHLVYGVRNCGMNFEWNLFR--FTDRDCNSLAQALRVFRNLKVFRLHKSKVDDDKACVLV 271

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
           R L ++  +  LDL++N +   GA+A++++LK    +  L L    +GA GA+ +A  L 
Sbjct: 272 RSLLNHPALVHLDLSHNQVSDRGARAIAKLLK-ESALRVLDLSNNNVGAHGAQALAHALT 330

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            N T+  L LR N + +EG + L  +  + N+ L  + L  NE+ +  A A++QAL  N 
Sbjct: 331 NNWTLRNLSLRLNHVGNEGGQALCNAL-LPNQTLQELHLGSNELSEPTASALSQALTHNG 389

Query: 557 DVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEV 593
             ++  L+LA N +   G       K L+  MS+ E 
Sbjct: 390 --SLRRLSLACNRIGPDG------GKQLLEGMSDNET 418



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 30/198 (15%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESL-----------G 187
           F   LFR + +  N  A+ LR F ++    +      D+    L  SL            
Sbjct: 227 FEWNLFRFTDRDCNSLAQALRVFRNLKVFRLHKSKVDDDKACVLVRSLLNHPALVHLDLS 286

Query: 188 YNQTAEE----------------VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
           +NQ ++                 +  + N + A G +A    L +N  L+ L+L  N +G
Sbjct: 287 HNQVSDRGARAIAKLLKESALRVLDLSNNNVGAHGAQALAHALTNNWTLRNLSLRLNHVG 346

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
           +EG + LC+ L+ N  ++ L L S +L +  A A+++ L +N  LR L L  N I   G 
Sbjct: 347 NEGGQALCNALLPNQTLQELHLGSNELSEPTASALSQALTHNGSLRRLSLACNRIGPDGG 406

Query: 292 TSLAEALLENSTIRSLHL 309
             L E + +N T+  L L
Sbjct: 407 KQLLEGMSDNETLLELDL 424



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%)

Query: 173 NFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
           + G+EG   L  +L  NQT +E+   +N ++     A    L  N +L+ L+L+ N IG 
Sbjct: 344 HVGNEGGQALCNALLPNQTLQELHLGSNELSEPTASALSQALTHNGSLRRLSLACNRIGP 403

Query: 233 EGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           +G K L + + DN  +  L L   ++  E    I ++LKNN
Sbjct: 404 DGGKQLLEGMSDNETLLELDLRLTEIGQESEFFINQVLKNN 444


>gi|68565101|sp|Q53B88.1|NOD2_HYLLA RecName: Full=Nucleotide-binding oligomerization domain-containing
            protein 2; AltName: Full=Caspase recruitment
            domain-containing protein 15
 gi|46370434|gb|AAS89990.1| caspase activation and recruitment domain protein family member 15
            [Hylobates lar]
          Length = 1040

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 122/244 (50%), Gaps = 5/244 (2%)

Query: 315  GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
            G     ALA  L+  +    L L  NS+GD G+  L+  L    G    L + +N+IS +
Sbjct: 775  GPAECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRDNNISDR 830

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            G   + E   +C+ L  + L+ N + D  A  +A  L   +    + LG N+I   GA  
Sbjct: 831  GICKLIECALHCEQLQKLVLFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITPAGAQV 890

Query: 435  IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
            +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 891  LAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 950

Query: 495  LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
            L  N  +  L L  N ++DEG   LA+  K  N +L  + L+ N I   GA A+ QAL+ 
Sbjct: 951  LAKNVMLEELCLEENHIQDEGVCSLAEGLK-KNSSLKILKLSNNCITYLGAKALLQALER 1009

Query: 555  NEDV 558
            N+ +
Sbjct: 1010 NDTI 1013



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 133/262 (50%), Gaps = 4/262 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            V  L+L+   +      A+A +L++      L+L+ N +   G   L   L      ++L
Sbjct: 764  VGHLKLTFCSVGPAECAALAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCL---GVCKAL 820

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G   L +     + L++L L  N + D    ++   L+ R+  LA L +G
Sbjct: 821  YLRDNNISDRGICKLIECALHCEQLQKLVLFNNKLTDGCAHSMAKLLACRQNFLA-LRLG 879

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+  GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L GNNI
Sbjct: 880  NNHITPAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNI 939

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N ++  L L  N I  +G  +L+E LK + ++  LKL    I   G
Sbjct: 940  GSVGAQALALMLAKNVMLEELCLEENHIQDEGVCSLAEGLKKNSSLKILKLSNNCITYLG 999

Query: 488  AEFVADMLRYNNTISILDLRAN 509
            A+ +   L  N+TI  + LR N
Sbjct: 1000 AKALLQALERNDTILEVWLRGN 1021



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 87/169 (51%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N IT AG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 863  MAKLLACRQNFLALRLGNNHITPAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEA 922

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N I   G  SLAE L +N
Sbjct: 923  LGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHIQDEGVCSLAEGLKKN 982

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN    E +  L
Sbjct: 983  SSLKILKLSNNCITYLGAKALLQALERNDTILEVWLRGNIFSLEEVDKL 1031



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 79/149 (53%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            F ++ +   +    G   LAE L  N + + + F  N +   G +A    L  + +L+ L
Sbjct: 873  FLALRLGNNHITPAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWL 932

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
            +L GN IG  G + L  +L  N  +E L L    ++DEG  ++AE LK NS L++L+L+N
Sbjct: 933  SLVGNNIGSVGAQALALMLAKNVMLEELCLEENHIQDEGVCSLAEGLKKNSSLKILKLSN 992

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            N I Y G  +L +AL  N TI  + L GN
Sbjct: 993  NCITYLGAKALLQALERNDTILEVWLRGN 1021



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 6/250 (2%)

Query: 159  KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI-KAFDGVLQSN 217
            + LR   ++ +   + GD G+  L   LG     + +    N I+  GI K  +  L   
Sbjct: 787  QHLRRPVALQLDYNSVGDIGVEQLLPCLG---VCKALYLRDNNISDRGICKLIECALHCE 843

Query: 218  IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
              L+ L L  N + D     +  +L        L+L +  +   GA+ +AE L+ N+ L+
Sbjct: 844  -QLQKLVLFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITPAGAQVLAEGLRGNTSLQ 902

Query: 278  VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             L    N +   G  +LAEAL ++ ++R L L GN  G++GA ALA  L  N  L EL L
Sbjct: 903  FLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCL 962

Query: 338  HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
              N I DEG+ +L  GL  +   L +L + NN I+  GA  + + ++   ++L + L  N
Sbjct: 963  EENHIQDEGVCSLAEGL-KKNSSLKILKLSNNCITYLGAKALLQALERNDTILEVWLRGN 1021

Query: 398  DIGDEGAEKI 407
                E  +K+
Sbjct: 1022 IFSLEEVDKL 1031


>gi|119592828|gb|EAW72422.1| hCG1733021, isoform CRA_b [Homo sapiens]
          Length = 2144

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 169/376 (44%), Gaps = 7/376 (1%)

Query: 210  FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAE 268
            F  +L ++  L+ L+L  + + +  +K LC  L      ++ L   +  +   G + +  
Sbjct: 1717 FCSMLGTHPHLRQLDLGSSILTERAMKTLCAKLRHPTCKIQTLMFRNAQI-TPGVQHLWR 1775

Query: 269  LLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLE 327
            ++  N  LR L L    +         EAL      + SL L+           +++ L 
Sbjct: 1776 IVMANRNLRSLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDCCGLTHACYLKISQILT 1835

Query: 328  GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
             + SL+ L L GN + D+G+  L   L   +  L  L + +  I+A G   +A  + + +
Sbjct: 1836 TSPSLKSLSLAGNKVTDQGVMPLSDALRVSQCALQKLILEDCGITATGCQSLASALVSNR 1895

Query: 388  SLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
            SL  + L  N +G+EG   +  +++  + ++  + L   ++ + G   +A  L  NS +T
Sbjct: 1896 SLTHLCLSNNSLGNEGVNLLCRSMRLPHCSLQRLMLNQCHLDTAGCGFLALALMGNSWLT 1955

Query: 447  SLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
             L L+ NP+  +G K L EV++    ++  L+L  C + A+  E ++ ++  +  +  LD
Sbjct: 1956 HLSLSMNPVEDNGVKLLCEVMREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSLD 2015

Query: 506  LRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNL 565
            L  N L D G   L +  K  N  LT + L    +  D   A++ AL  N    +TSLNL
Sbjct: 2016 LTDNALGDGGVAALCEGLKQKNSVLTRLGLKACGLTSDCCEALSLALSCNRH--LTSLNL 2073

Query: 566  ANNFLTKFGQSALTDA 581
              N  +  G   L  A
Sbjct: 2074 VQNNFSPKGMMKLCSA 2089



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 151/340 (44%), Gaps = 4/340 (1%)

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDL 258
            N     G++    ++ +N  L++LNL G  + +E V+  C+ L      +E L+L    L
Sbjct: 1763 NAQITPGVQHLWRIVMANRNLRSLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDCCGL 1822

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGAL 317
                   I+++L  +  L+ L L  N +   G   L++AL +    ++ L L      A 
Sbjct: 1823 THACYLKISQILTTSPSLKSLSLAGNKVTDQGVMPLSDALRVSQCALQKLILEDCGITAT 1882

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            G  +LA  L  N+SL  L L  NS+G+EG+  L   +      L  L +    +   G  
Sbjct: 1883 GCQSLASALVSNRSLTHLCLSNNSLGNEGVNLLCRSMRLPHCSLQRLMLNQCHLDTAGCG 1942

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIA 436
             +A  +     L  ++L MN + D G + + + +++    +  ++L   ++ +    +++
Sbjct: 1943 FLALALMGNSWLTHLSLSMNPVEDNGVKLLCEVMREPSCHLQDLELVKCHLTAACCESLS 2002

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT-LKLGWCQIGASGAEFVADML 495
             V+  +  + SLDL  N +G  G  AL E LK   ++ T L L  C + +   E ++  L
Sbjct: 2003 CVISRSRHLKSLDLTDNALGDGGVAALCEGLKQKNSVLTRLGLKACGLTSDCCEALSLAL 2062

Query: 496  RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
              N  ++ L+L  N    +G   L  +F      L  I L
Sbjct: 2063 SCNRHLTSLNLVQNNFSPKGMMKLCSAFACPTSNLQIIGL 2102



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 34/232 (14%)

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL-------------DIGNN--- 369
           L GN+ LR L +    +  + ++ L   L S + +L  L             D+GNN   
Sbjct: 698 LTGNQHLRYLEIQHVEVESKAVKLLCRALRSPRCRLQCLRLEDCLATPRIWTDLGNNLQG 757

Query: 370 ------------SISAKGAFHVA----EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ 413
                       S+   GA++++    E +   K L  ++L  N + DEGA+ I +AL  
Sbjct: 758 NGHLKTLILRKNSLENCGAYYLSVAQLERLSQSKMLTHLSLAENALKDEGAKHIWNALPH 817

Query: 414 NRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK-FHG 471
            R  +  + L   ++       +   L  N  + SLDL++N +  DG   L E LK    
Sbjct: 818 LRCPLQRLVLRKCDLTFNCCQDMISALCKNKTLKSLDLSFNSLKDDGVILLCEALKNPDC 877

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF 523
            +  L+L  C   +   + +A MLR N  +  LDL  N +   G   L ++F
Sbjct: 878 TLQILELENCLFTSICCQAMASMLRKNQHLRHLDLSKNAIGVYGILTLCEAF 929



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 104/260 (40%), Gaps = 34/260 (13%)

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA-----I 266
           GVL  N  L+ L +    +  + VK LC  L       R +L  + L D  A       +
Sbjct: 696 GVLTGNQHLRYLEIQHVEVESKAVKLLCRALRS----PRCRLQCLRLEDCLATPRIWTDL 751

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
              L+ N  L+ L L  N ++  G   L+ A LE                         L
Sbjct: 752 GNNLQGNGHLKTLILRKNSLENCGAYYLSVAQLER------------------------L 787

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNC 386
             +K L  L L  N++ DEG + + + L   +  L  L +    ++      +   +   
Sbjct: 788 SQSKMLTHLSLAENALKDEGAKHIWNALPHLRCPLQRLVLRKCDLTFNCCQDMISALCKN 847

Query: 387 KSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
           K+L  ++L  N + D+G   + +ALK  + T+  ++L      S    A+A +L+ N  +
Sbjct: 848 KTLKSLDLSFNSLKDDGVILLCEALKNPDCTLQILELENCLFTSICCQAMASMLRKNQHL 907

Query: 446 TSLDLAYNPIGADGAKALSE 465
             LDL+ N IG  G   L E
Sbjct: 908 RHLDLSKNAIGVYGILTLCE 927



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKN 272
           L  N  LK+L+LS N + D+GV  LC+ L + +  ++ L+L +        +A+A +L+ 
Sbjct: 844 LCKNKTLKSLDLSFNSLKDDGVILLCEALKNPDCTLQILELENCLFTSICCQAMASMLRK 903

Query: 273 NSILRVLELNNNMIDYSGFTSLAEAL 298
           N  LR L+L+ N I   G  +L EA 
Sbjct: 904 NQHLRHLDLSKNAIGVYGILTLCEAF 929


>gi|399497986|emb|CCG20321.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG+ A+ + L      LAVL++  + I+A+
Sbjct: 339 GPEAGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLEMAGSDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ D GA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDGGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 143/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A+ EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEAGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEG   IA+ALK +  ++  +++ G++I ++ ASAIA  +    ++  L L  N +   
Sbjct: 367 EDEGVIAIANALKDSAPSLAVLEMAGSDITAEAASAIASCIAAKQLLAKLSLGENELKDG 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 CELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   G   +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEAGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  + +  E A     S     + L  + L  NE++D GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGSDITAEAAS-AIASCIAAKQLLAKLSLGENELKDGGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459


>gi|395843933|ref|XP_003794725.1| PREDICTED: leucine-rich repeat-containing protein 34 [Otolemur
           garnettii]
          Length = 594

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 114/218 (52%), Gaps = 10/218 (4%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N +   GA++ ++ I+   +L+++NL  NDIG EG E IA AL +N+T+  + + 
Sbjct: 258 LDVRYNLLGDVGAYYSSKLIQKQLNLVYLNLMFNDIGPEGGEMIAKALHKNKTLKYLRMT 317

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I +KG    A +L+ NS +  LDL    +G     A + VL  +  I  + L    +
Sbjct: 318 GNKIENKGGMCFATMLQINSSLQKLDLGDCDLGMQSVIAFATVLTQNQAIKGINLNRPIL 377

Query: 484 GASGAE---FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
                E    +  ML+ N+ +  L L  +G++  G + L ++ + +N AL  +D++ N+I
Sbjct: 378 YGEQEESTVHLGHMLKENHVLVELHLCKHGIKSFGMQQLCEALR-LNSALRYLDVSCNQI 436

Query: 541 RDDGAFAIAQALKANEDVAVTSL------NLANNFLTK 572
             DG   +A  LK+N  + V  L      N+  ++L+K
Sbjct: 437 TRDGMMYLANVLKSNTTLEVIDLSFNRIENVGADYLSK 474



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 142/309 (45%), Gaps = 8/309 (2%)

Query: 250 RLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           RLQ    ++   G + I   +  NS L  +E     +    F  L+  L     I  L +
Sbjct: 205 RLQELYEEVTKGGEEGITLNITGNSRLAPVE----RVTGEDFWILSRVLKNCLYINGLDV 260

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
             N  G +GA   +K ++   +L  L+L  N IG EG   +   L   K  L  L +  N
Sbjct: 261 RYNLLGDVGAYYSSKLIQKQLNLVYLNLMFNDIGPEGGEMIAKALHKNK-TLKYLRMTGN 319

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
            I  KG    A  ++   SL  ++L   D+G +     A  L QN+ I  I+L    ++ 
Sbjct: 320 KIENKGGMCFATMLQINSSLQKLDLGDCDLGMQSVIAFATVLTQNQAIKGINLNRPILYG 379

Query: 430 KGASA---IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS 486
           +   +   +  +LK+N V+  L L  + I + G + L E L+ +  +  L +   QI   
Sbjct: 380 EQEESTVHLGHMLKENHVLVELHLCKHGIKSFGMQQLCEALRLNSALRYLDVSCNQITRD 439

Query: 487 GAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
           G  ++A++L+ N T+ ++DL  N + + GA  L+++    N +L ++ +  N I  +G  
Sbjct: 440 GMMYLANVLKSNTTLEVIDLSFNRIENVGADYLSKTLTSHNRSLKALSVVSNNIEGEGLV 499

Query: 547 AIAQALKAN 555
           A++ A++ N
Sbjct: 500 ALSAAVRTN 508



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 5/261 (1%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           ++Q  + L  LNL  N IG EG + +   L  N  ++ L+++   + ++G    A +L+ 
Sbjct: 276 LIQKQLNLVYLNLMFNDIGPEGGEMIAKALHKNKTLKYLRMTGNKIENKGGMCFATMLQI 335

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--YGGALGANA-LAKGLEGN 329
           NS L+ L+L +  +      + A  L +N  I+ ++LN    YG    +   L   L+ N
Sbjct: 336 NSSLQKLDLGDCDLGMQSVIAFATVLTQNQAIKGINLNRPILYGEQEESTVHLGHMLKEN 395

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             L ELHL  + I   G++ L   L      L  LD+  N I+  G  ++A  +K+  +L
Sbjct: 396 HVLVELHLCKHGIKSFGMQQLCEALRLNSA-LRYLDVSCNQITRDGMMYLANVLKSNTTL 454

Query: 390 LWINLYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
             I+L  N I + GA+ ++  L   NR++  + +  NNI  +G  A++  ++ N V +++
Sbjct: 455 EVIDLSFNRIENVGADYLSKTLTSHNRSLKALSVVSNNIEGEGLVALSAAVRTNPVFSNI 514

Query: 449 DLAYNPIGADGAKALSEVLKF 469
            +  N        A SE+++ 
Sbjct: 515 YIWGNKFDEATCVAYSELIQM 535



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 143/339 (42%), Gaps = 29/339 (8%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           VL++ + +  L++  N +GD G      ++     +  L L   D+  EG + IA+ L  
Sbjct: 248 VLKNCLYINGLDVRYNLLGDVGAYYSSKLIQKQLNLVYLNLMFNDIGPEGGEMIAKALHK 307

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
           N  L+ L +  N I+  G    A  L  NS+++ L L     G     A A  L  N+++
Sbjct: 308 NKTLKYLRMTGNKIENKGGMCFATMLQINSSLQKLDLGDCDLGMQSVIAFATVLTQNQAI 367

Query: 333 RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
           + ++L+         R ++ G                    +   H+   +K    L+ +
Sbjct: 368 KGINLN---------RPILYGEQE-----------------ESTVHLGHMLKENHVLVEL 401

Query: 393 NLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAY 452
           +L  + I   G +++ +AL+ N  +  +D+  N I   G   +A VLK N+ +  +DL++
Sbjct: 402 HLCKHGIKSFGMQQLCEALRLNSALRYLDVSCNQITRDGMMYLANVLKSNTTLEVIDLSF 461

Query: 453 NPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
           N I   GA  LS+ L  H  ++  L +    I   G   ++  +R N   S + +  N  
Sbjct: 462 NRIENVGADYLSKTLTSHNRSLKALSVVSNNIEGEGLVALSAAVRTNPVFSNIYIWGNKF 521

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQ 550
            DE A C+A S  +    L   D        DG   +A+
Sbjct: 522 -DE-ATCVAYSELIQMGHLKPEDTDVEPFTVDGHVHLAE 558



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 6/200 (3%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           +    + M+G    ++G    A  L  N + +++      +    + AF  VL  N A+K
Sbjct: 309 KTLKYLRMTGNKIENKGGMCFATMLQINSSLQKLDLGDCDLGMQSVIAFATVLTQNQAIK 368

Query: 222 TLNLSGNPI----GDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
            +NL+  PI     +E    L  +L +N  +  L L    ++  G + + E L+ NS LR
Sbjct: 369 GINLN-RPILYGEQEESTVHLGHMLKENHVLVELHLCKHGIKSFGMQQLCEALRLNSALR 427

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG-NKSLRELH 336
            L+++ N I   G   LA  L  N+T+  + L+ N    +GA+ L+K L   N+SL+ L 
Sbjct: 428 YLDVSCNQITRDGMMYLANVLKSNTTLEVIDLSFNRIENVGADYLSKTLTSHNRSLKALS 487

Query: 337 LHGNSIGDEGIRALMSGLSS 356
           +  N+I  EG+ AL + + +
Sbjct: 488 VVSNNIEGEGLVALSAAVRT 507


>gi|326432234|gb|EGD77804.1| hypothetical protein PTSG_08894 [Salpingoeca sp. ATCC 50818]
          Length = 575

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 153/346 (44%), Gaps = 34/346 (9%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           L   + +D+SG    +E +  +A  L      + +    NG+ +  +      +++ + L
Sbjct: 137 LHRLTHLDLSGSITDNECVRHVASRLPTMACLQHLLLEDNGLDSRDVDVLFNAVET-LPL 195

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            TL+LS N +GD G   L   L     ++ L L +V +   G   I   +K    +  L+
Sbjct: 196 VTLSLSDNELGDIGATTLASHLRKMPDLQHLGLDNVAMSSTGLHTI---MKACPSVATLK 252

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           +++N ID +    LAEA+                                 LR L L   
Sbjct: 253 ISDNDIDAALTKPLAEAM------------------------------QVCLRHLELKST 282

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            +    +   ++ L SR   L VL + +N +S  G   +A+ +K   SL  ++L  N+I 
Sbjct: 283 DLDANDLMPAINTLKSRGCVLEVLRLWDNRVSDHGVAAIAQSLKENASLKVLDLRFNNIS 342

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
             GA  +A AL++N T+ T+ L  N I ++G   +A +L  NS + +LDL  N IG DGA
Sbjct: 343 SHGARSLASALEKNTTLHTLSLKFNRIGNRGCKHLAGMLAKNSSLHTLDLEDNEIGDDGA 402

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
            +L+  L+ + ++  L L + ++           L  N  +++LDL
Sbjct: 403 VSLARGLERNTSVRELNLRYNKVSDKALADFGKCLENNRALAVLDL 448



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D G+  +A+SL  N + + +    N I++ G ++    L+ N  L TL+L  N IG+ G 
Sbjct: 315 DHGVAAIAQSLKENASLKVLDLRFNNISSHGARSLASALEKNTTLHTLSLKFNRIGNRGC 374

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           K L  +L  N+ +  L L   ++ D+GA ++A  L+ N+ +R L L  N +         
Sbjct: 375 KHLAGMLAKNSSLHTLDLEDNEIGDDGAVSLARGLERNTSVRELNLRYNKVSDKALADFG 434

Query: 296 EALLENSTIRSLHLNGN---YGGAL--GANALAKGLEGNKSLRELHLHGNS 341
           + L  N  +  L L+      GG    G   L + L  N S+R +++H ++
Sbjct: 435 KCLENNRALAVLDLSSKPHVVGGITMDGLMVLERALLRNTSVRRINVHNHA 485



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 5/159 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           KE  +   +D+   N    G   LA +L  N T   +S   N I   G K   G+L  N 
Sbjct: 326 KENASLKVLDLRFNNISSHGARSLASALEKNTTLHTLSLKFNRIGNRGCKHLAGMLAKNS 385

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           +L TL+L  N IGD+G   L   L  N  V  L L    + D+      + L+NN  L V
Sbjct: 386 SLHTLDLEDNEIGDDGAVSLARGLERNTSVRELNLRYNKVSDKALADFGKCLENNRALAV 445

Query: 279 LELNNNM-----IDYSGFTSLAEALLENSTIRSLHLNGN 312
           L+L++       I   G   L  ALL N+++R ++++ +
Sbjct: 446 LDLSSKPHVVGGITMDGLMVLERALLRNTSVRRINVHNH 484


>gi|123407026|ref|XP_001302916.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121884250|gb|EAX89986.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 564

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 193/422 (45%), Gaps = 10/422 (2%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGI-TAAGIKAFDGVLQSNIALKT 222
            ++V++SG    D       E++  N    ++    N + T + ++ FD +L+SN  +  
Sbjct: 30  INTVNLSGFEMDDSTTNRFCEAMNRNYFISKIILCKNSLSTHSCMQIFD-LLKSNPKIIY 88

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVE---RLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L +S N + D  ++ L  IL+    +     L L   +    GAK+IA  +  N+ +  L
Sbjct: 89  LEISDNCVNDSSLEYLSTILISLPSIRDPITLILRKNEFTQYGAKSIARFISLNAPVSWL 148

Query: 280 ELN-NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           +L  N+ I   G   +A +L  N+ +  L L     G  GA A++  L  N+SL+ L L 
Sbjct: 149 DLRGNSQITDEGIQLIARSLETNTILSLLDLIKCGCGKDGAAAISDSLTKNRSLKTLLLQ 208

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            +   D  I +L + LS+    L  L +   +++      + + +K   SL+ + L  N 
Sbjct: 209 -DKFEDPAISSLGTLLSNPLCSLEQLYLWKCNLTTPLLEKLCDSLKTNHSLVTLALSYNG 267

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
             DE    ++  +  N +I  + LG NN     A  ++  +  N  + +LDL+ N + ++
Sbjct: 268 FEDETVFALSKMIYSNTSIKKLHLGSNNFSCASAGFLSIAISQNKTLENLDLSRNFLNSN 327

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           G   ++  L+ + +I  L +    I ASGA  ++D+  +N +I+ + L  N   D     
Sbjct: 328 GLWPIAVALESNSHIQYLDIRDNNIDASGAVLISDLFLHNKSITTVRLSRNMFGDAAVAL 387

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           L+ +F+  N  L  ++L    +   G  A+  AL  N+  A+  ++++ N L      A 
Sbjct: 388 LSGTFR-SNSTLRDVELDDVMMTSRGFIALCSALSQNK--AIERISVSQNRLCVKAMRAF 444

Query: 579 TD 580
            D
Sbjct: 445 KD 446



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 163/372 (43%), Gaps = 5/372 (1%)

Query: 165 SSVDMSGRN-FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
           S +D+ G +   DEG+  +A SL  N     +     G    G  A    L  N +LKTL
Sbjct: 146 SWLDLRGNSQITDEGIQLIARSLETNTILSLLDLIKCGCGKDGAAAISDSLTKNRSLKTL 205

Query: 224 NLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L  +   D  +  L  +L +    +E+L L   +L     + + + LK N  L  L L+
Sbjct: 206 -LLQDKFEDPAISSLGTLLSNPLCSLEQLYLWKCNLTTPLLEKLCDSLKTNHSLVTLALS 264

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N  +     +L++ +  N++I+ LHL  N      A  L+  +  NK+L  L L  N +
Sbjct: 265 YNGFEDETVFALSKMIYSNTSIKKLHLGSNNFSCASAGFLSIAISQNKTLENLDLSRNFL 324

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
              G+  +   L S    +  LDI +N+I A GA  +++   + KS+  + L  N  GD 
Sbjct: 325 NSNGLWPIAVALES-NSHIQYLDIRDNNIDASGAVLISDLFLHNKSITTVRLSRNMFGDA 383

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
               ++   + N T+  ++L    + S+G  A+   L  N  I  + ++ N +     +A
Sbjct: 384 AVALLSGTFRSNSTLRDVELDDVMMTSRGFIALCSALSQNKAIERISVSQNRLCVKAMRA 443

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
             ++L     + ++ L  C I  S    +A+ L  N+++  +D+  N     G   +A S
Sbjct: 444 FKDLLAITKTLASVSLSHCNIDDSCCLQIAEGLSLNSSLRSIDISNNIYTVAGLSVIADS 503

Query: 523 FKVVNEALTSID 534
             + N  L  ID
Sbjct: 504 I-MNNYTLCRID 514



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 6/251 (2%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +   NF      FL+ ++  N+T E +  + N + + G+      L+SN  ++ L++  N
Sbjct: 291 LGSNNFSCASAGFLSIAISQNKTLENLDLSRNFLNSNGLWPIAVALESNSHIQYLDIRDN 350

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            I   G   + D+ + N  +  ++LS     D     ++   ++NS LR +EL++ M+  
Sbjct: 351 NIDASGAVLISDLFLHNKSITTVRLSRNMFGDAAVALLSGTFRSNSTLRDVELDDVMMTS 410

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
            GF +L  AL +N  I  + ++ N        A    L   K+L  + L   +I D    
Sbjct: 411 RGFIALCSALSQNKAIERISVSQNRLCVKAMRAFKDLLAITKTLASVSLSHCNIDDSCCL 470

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI-GDEGAE-- 405
            +  GL S    L  +DI NN  +  G   +A+ I N  +L  I+ +  +I GD+ A+  
Sbjct: 471 QIAEGL-SLNSSLRSIDISNNIYTVAGLSVIADSIMNNYTLCRIDYFGCNIEGDDFAKSV 529

Query: 406 --KIADALKQN 414
             +I+D +++N
Sbjct: 530 GGRISDCIERN 540



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 1/260 (0%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S   F DE +F L++ +  N + +++   +N  + A        +  N  L+ L+LS N
Sbjct: 263 LSYNGFEDETVFALSKMIYSNTSIKKLHLGSNNFSCASAGFLSIAISQNKTLENLDLSRN 322

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            +   G+  +   L  N+ ++ L +   ++   GA  I++L  +N  +  + L+ NM   
Sbjct: 323 FLNSNGLWPIAVALESNSHIQYLDIRDNNIDASGAVLISDLFLHNKSITTVRLSRNMFGD 382

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           +    L+     NST+R + L+     + G  AL   L  NK++  + +  N +  + +R
Sbjct: 383 AAVALLSGTFRSNSTLRDVELDDVMMTSRGFIALCSALSQNKAIERISVSQNRLCVKAMR 442

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           A    L+  K  LA + + + +I       +AE +    SL  I++  N     G   IA
Sbjct: 443 AFKDLLAITK-TLASVSLSHCNIDDSCCLQIAEGLSLNSSLRSIDISNNIYTVAGLSVIA 501

Query: 409 DALKQNRTITTIDLGGNNIH 428
           D++  N T+  ID  G NI 
Sbjct: 502 DSIMNNYTLCRIDYFGCNIE 521


>gi|326676360|ref|XP_001922112.3| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 [Danio
            rerio]
          Length = 1251

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 140/285 (49%), Gaps = 7/285 (2%)

Query: 305  RSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
            RS+ L+G      G  ALA  L  + S LREL L  N++ D G++ L  GL     KL  
Sbjct: 957  RSVQLSGCSVTDKGCAALALVLRSDSSHLRELDLSENNLRDSGVKLLSDGLKDPHCKLEK 1016

Query: 364  LDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTID 421
            L + +  ++ +G   +A  ++ N   L  ++L +N++ D G + ++D LK     +  + 
Sbjct: 1017 LRLSDCGVTDEGCAALASALRSNSTHLTELDLSLNNLEDSGVKLLSDGLKDPHCKLEILR 1076

Query: 422  LGGNNIHSKGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLG 479
            L    +  +G + +A  L+ NS  +  LDL  N +   G   LS  LK  H  +  L+L 
Sbjct: 1077 LSDCGVTVEGCADLASALRSNSTHLRELDLTLNNLEDSGVNLLSAGLKDPHCKLEKLRLS 1136

Query: 480  WCQIGASGAEFVADMLRYNNT-ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFN 538
             C     G   +A  LR N+T ++ LDL  N   D G K L+   K  +  L  + L++ 
Sbjct: 1137 DCGFTDEGCADLASALRSNSTHLTELDLSLNNFGDSGVKLLSDGLKDPHCKLEKLRLSYC 1196

Query: 539  EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
             +R +G  A+A AL++N +  +  L+L+ N L   G   L++ K+
Sbjct: 1197 RVRAEGGVALASALRSNPE-HLRELDLSENKLGNSGVKMLSELKN 1240



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 6/207 (2%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV-SFAANGITAAGIKAFDGVLQSN-IALK 221
             + +D+S  N  D G+  L++ L       E+   +  G+T  G       L+SN   L+
Sbjct: 1043 LTELDLSLNNLEDSGVKLLSDGLKDPHCKLEILRLSDCGVTVEGCADLASALRSNSTHLR 1102

Query: 222  TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVL 279
             L+L+ N + D GV  L   L D +  +E+L+LS     DEG   +A  L++NS  L  L
Sbjct: 1103 ELDLTLNNLEDSGVNLLSAGLKDPHCKLEKLRLSDCGFTDEGCADLASALRSNSTHLTEL 1162

Query: 280  ELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGN-KSLRELHL 337
            +L+ N    SG   L++ L + +  +  L L+     A G  ALA  L  N + LREL L
Sbjct: 1163 DLSLNNFGDSGVKLLSDGLKDPHCKLEKLRLSYCRVRAEGGVALASALRSNPEHLRELDL 1222

Query: 338  HGNSIGDEGIRALMSGLSSRKGKLAVL 364
              N +G+ G++ L    +  + KL  L
Sbjct: 1223 SENKLGNSGVKMLSELKNDSRYKLDTL 1249


>gi|156375065|ref|XP_001629903.1| predicted protein [Nematostella vectensis]
 gi|156216913|gb|EDO37840.1| predicted protein [Nematostella vectensis]
          Length = 270

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 115/212 (54%), Gaps = 3/212 (1%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +S    G+EG   +A+ L  N   +E+  + N +  A + A   +++ N +L+ LNLSGN
Sbjct: 44  LSNTCLGNEGARLVAKGLVKNTCVKELDLSRNNLQKACMSAVGELIELNDSLEILNLSGN 103

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            + DE ++ L   ++    +  L LS   L DE A ++ ++L  N  L  L LN+N ++ 
Sbjct: 104 SLTDEAIEPLMSSILLKCRLAELNLSHNILCDEFASSMGQVLLTNRNLTRLLLNSNHLEV 163

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIR 348
           SG  ++A  L +  T++ L ++ NY   +GA AL+  +  NK+L EL + GN I  EG  
Sbjct: 164 SGLIAMANGLQKTRTLKFLDVSWNYIHDVGAKALSDIVSANKALEELVICGNFISKEG-- 221

Query: 349 ALMSGLSSRKGK-LAVLDIGNNSISAKGAFHV 379
           A   G S RK K L VL IG N +  +GA+ +
Sbjct: 222 AAQIGQSLRKNKTLRVLRIGKNLLRNEGAYSI 253



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 57/296 (19%)

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
           + L+L+G P+G   +  +   L  +  V RL LS+  L +EGA+ +A+ L  N+ ++ L+
Sbjct: 12  EALDLTGCPVGPVNISAIVRKLFPSMFVTRLVLSNTCLGNEGARLVAKGLVKNTCVKELD 71

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L+ N +  +  +++ E                             +E N SL  L+L GN
Sbjct: 72  LSRNNLQKACMSAVGEL----------------------------IELNDSLEILNLSGN 103

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           S+ DE I  LMS +                            +  C+ L  +NL  N + 
Sbjct: 104 SLTDEAIEPLMSSI----------------------------LLKCR-LAELNLSHNILC 134

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           DE A  +   L  NR +T + L  N++   G  A+A  L+    +  LD+++N I   GA
Sbjct: 135 DEFASSMGQVLLTNRNLTRLLLNSNHLEVSGLIAMANGLQKTRTLKFLDVSWNYIHDVGA 194

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
           KALS+++  +  +  L +    I   GA  +   LR N T+ +L +  N LR+EGA
Sbjct: 195 KALSDIVSANKALEELVICGNFISKEGAAQIGQSLRKNKTLRVLRIGKNLLRNEGA 250



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 1/247 (0%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N+ +E +      +    I A    L  ++ +  L LS   +G+EG + +   LV N  V
Sbjct: 8   NRKSEALDLTGCPVGPVNISAIVRKLFPSMFVTRLVLSNTCLGNEGARLVAKGLVKNTCV 67

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           + L LS  +L+     A+ EL++ N  L +L L+ N +       L  ++L    +  L+
Sbjct: 68  KELDLSRNNLQKACMSAVGELIELNDSLEILNLSGNSLTDEAIEPLMSSILLKCRLAELN 127

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
           L+ N      A+++ + L  N++L  L L+ N +   G+ A+ +GL   +  L  LD+  
Sbjct: 128 LSHNILCDEFASSMGQVLLTNRNLTRLLLNSNHLEVSGLIAMANGLQKTR-TLKFLDVSW 186

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N I   GA  +++ +   K+L  + +  N I  EGA +I  +L++N+T+  + +G N + 
Sbjct: 187 NYIHDVGAKALSDIVSANKALEELVICGNFISKEGAAQIGQSLRKNKTLRVLRIGKNLLR 246

Query: 429 SKGASAI 435
           ++GA +I
Sbjct: 247 NEGAYSI 253



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 2/253 (0%)

Query: 300 ENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
           +N    +L L G   G +  +A+ + L  +  +  L L    +G+EG R +  GL  +  
Sbjct: 7   QNRKSEALDLTGCPVGPVNISAIVRKLFPSMFVTRLVLSNTCLGNEGARLVAKGLV-KNT 65

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
            +  LD+  N++       V E I+   SL  +NL  N + DE  E +  ++     +  
Sbjct: 66  CVKELDLSRNNLQKACMSAVGELIELNDSLEILNLSGNSLTDEAIEPLMSSILLKCRLAE 125

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           ++L  N +  + AS++ +VL  N  +T L L  N +   G  A++  L+    +  L + 
Sbjct: 126 LNLSHNILCDEFASSMGQVLLTNRNLTRLLLNSNHLEVSGLIAMANGLQKTRTLKFLDVS 185

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
           W  I   GA+ ++D++  N  +  L +  N +  EGA  + QS +  N+ L  + +  N 
Sbjct: 186 WNYIHDVGAKALSDIVSANKALEELVICGNFISKEGAAQIGQSLR-KNKTLRVLRIGKNL 244

Query: 540 IRDDGAFAIAQAL 552
           +R++GA++I   L
Sbjct: 245 LRNEGAYSILHGL 257



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 3/202 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+S  N     +  + E +  N + E ++ + N +T   I+     +     L  LNLS
Sbjct: 70  LDLSRNNLQKACMSAVGELIELNDSLEILNLSGNSLTDEAIEPLMSSILLKCRLAELNLS 129

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N + DE    +  +L+ N  + RL L+S  L   G  A+A  L+    L+ L+++ N I
Sbjct: 130 HNILCDEFASSMGQVLLTNRNLTRLLLNSNHLEVSGLIAMANGLQKTRTLKFLDVSWNYI 189

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
              G  +L++ +  N  +  L + GN+    GA  + + L  NK+LR L +  N + +EG
Sbjct: 190 HDVGAKALSDIVSANKALEELVICGNFISKEGAAQIGQSLRKNKTLRVLRIGKNLLRNEG 249

Query: 347 IRALMSGL--SSRKGKLAVLDI 366
             +++ GL  SS  G L V+D+
Sbjct: 250 AYSILHGLMRSSHSG-LEVVDL 270



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 66/139 (47%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            + +++S     DE    + + L  N+    +   +N +  +G+ A    LQ    LK L
Sbjct: 123 LAELNLSHNILCDEFASSMGQVLLTNRNLTRLLLNSNHLEVSGLIAMANGLQKTRTLKFL 182

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           ++S N I D G K L DI+  N  +E L +    +  EGA  I + L+ N  LRVL +  
Sbjct: 183 DVSWNYIHDVGAKALSDIVSANKALEELVICGNFISKEGAAQIGQSLRKNKTLRVLRIGK 242

Query: 284 NMIDYSGFTSLAEALLENS 302
           N++   G  S+   L+ +S
Sbjct: 243 NLLRNEGAYSILHGLMRSS 261



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 3/169 (1%)

Query: 412 KQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           KQNR    +DL G  +     SAI R L  +  +T L L+   +G +GA+ +++ L  + 
Sbjct: 6   KQNRKSEALDLTGCPVGPVNISAIVRKLFPSMFVTRLVLSNTCLGNEGARLVAKGLVKNT 65

Query: 472 NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALT 531
            +  L L    +  +    V +++  N+++ IL+L  N L DE  + L  S  ++   L 
Sbjct: 66  CVKELDLSRNNLQKACMSAVGELIELNDSLEILNLSGNSLTDEAIEPLMSSI-LLKCRLA 124

Query: 532 SIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
            ++L+ N + D+ A ++ Q L  N +  +T L L +N L   G  A+ +
Sbjct: 125 ELNLSHNILCDEFASSMGQVLLTNRN--LTRLLLNSNHLEVSGLIAMAN 171



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 3/182 (1%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G      I   L  +  +T + L    + ++GA  +A+ L  N+ +  LDL+ N +   
Sbjct: 21  VGPVNISAIVRKLFPSMFVTRLVLSNTCLGNEGARLVAKGLVKNTCVKELDLSRNNLQKA 80

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
              A+ E+++ + ++  L L    +     E +   +     ++ L+L  N L DE A  
Sbjct: 81  CMSAVGELIELNDSLEILNLSGNSLTDEAIEPLMSSILLKCRLAELNLSHNILCDEFASS 140

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           + Q   + N  LT + L  N +   G  A+A  L+    +    L+++ N++   G  AL
Sbjct: 141 MGQVL-LTNRNLTRLLLNSNHLEVSGLIAMANGLQKTRTLKF--LDVSWNYIHDVGAKAL 197

Query: 579 TD 580
           +D
Sbjct: 198 SD 199


>gi|23273930|gb|AAH35022.1| T-complex-associated-testis-expressed 1 [Homo sapiens]
 gi|123981216|gb|ABM82437.1| hypothetical protein MGC33600 [synthetic construct]
 gi|123996053|gb|ABM85628.1| hypothetical protein MGC33600 [synthetic construct]
          Length = 501

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQ 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 474



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 2/194 (1%)

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           +    +A  IK C +L    L  + + D+ A  I  +L  +  +  +DL  N I  +GA 
Sbjct: 266 RDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGAR 325

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
             A++L  +S +  L+LA N + A GA++L+  L  + N+ +L L    I   G + +A 
Sbjct: 326 GAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAH 384

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L+ N  ++ L L  N L +  A  L+Q    +N  LTSI+L+ N I  DG   + + + 
Sbjct: 385 ALQTNKCLTTLHLGGNELSEPTATLLSQVL-AINTTLTSINLSCNHIGLDGGKQLLEGMS 443

Query: 554 ANEDVAVTSLNLAN 567
            N+ +    L L++
Sbjct: 444 DNKTLLEFDLRLSD 457



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 2/209 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 270 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARGAA 328

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 329 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 387

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 388 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 447

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +   DLR + +  E    + Q+     EA
Sbjct: 448 LLEFDLRLSDVAQESEYLIGQALYANREA 476



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 293 DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 351

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 352 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 411

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 412 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 461


>gi|397526737|ref|XP_003833274.1| PREDICTED: T-complex-associated testis-expressed protein 1 [Pan
           paniscus]
          Length = 501

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQ 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  N+
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANQ 474



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 2/168 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N IGD GA   A  L  +R +  ++L  N + + GA ++A  L  N+ + SL+L 
Sbjct: 312 LDLSQNLIGDRGARGAAKLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLR 370

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I  +G +AL+  L+ +  + TL LG  ++    A  ++ +L  N T++ ++L  N +
Sbjct: 371 LNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHI 430

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
             +G K L +     N+ L   DL  +++  +  + I QAL AN++ A
Sbjct: 431 GLDGGKQLLEGMSD-NKTLLEFDLRLSDVAQESEYLIGQALYANQEAA 477



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 2/209 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 270 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARGAA 328

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 329 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 387

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 388 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 447

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +   DLR + +  E    + Q+     EA
Sbjct: 448 LLEFDLRLSDVAQESEYLIGQALYANQEA 476



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 2/194 (1%)

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           +    +A  IK C +L    L  + + D+ A  I  +L  +  +  +DL  N I  +GA 
Sbjct: 266 RDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGAR 325

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
             A++L  +S +  L+LA N + A GA++L+  L  + N+ +L L    I   G + +A 
Sbjct: 326 GAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAH 384

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L+ N  ++ L L  N L +  A  L+Q    +N  LTSI+L+ N I  DG   + + + 
Sbjct: 385 ALQTNKCLTTLHLGGNELSEPTATLLSQVL-AINTTLTSINLSCNHIGLDGGKQLLEGMS 443

Query: 554 ANEDVAVTSLNLAN 567
            N+ +    L L++
Sbjct: 444 DNKTLLEFDLRLSD 457



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 293 DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 351

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 352 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 411

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 412 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 461


>gi|444725041|gb|ELW65621.1| T-complex-associated testis-expressed protein 1 [Tupaia chinensis]
          Length = 553

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 98/187 (52%), Gaps = 2/187 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  Y    SLA  +    T++   L  +      A  L + L  +  L EL L 
Sbjct: 309 FEWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSQLDDDKARILIRSLLDHPVLEELDLS 368

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G R     LS    +L VL++ NN + A GA  +A  + +   L+ +NL +N 
Sbjct: 369 HNLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTHLVSLNLRLNC 426

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + +A AL+ N+ +TT+ LGGN +    A+ +A+VL  N+ +TS++L+ N IG D
Sbjct: 427 IEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLAQVLAINTTLTSINLSCNHIGLD 486

Query: 459 GAKALSE 465
           G K L E
Sbjct: 487 GGKQLLE 493



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 325 AATIKACH-------TLKIFRLTRSQLDDDKARILIRSLLDHPVLEELDLSHNLIGDRGA 377

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 378 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTHLVSLNLRLNCIEDEGGQALA 436

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L++ + +    L  +++  N I   G   + E +
Sbjct: 437 HALQTNKCLTTLHLGGNELS-EPTATLLAQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 495

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 496 SDNKTLLEFDLRLSDVAQESEYLIGQALHANR 527



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 2/211 (0%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R L+  L      L  LD+ +N I  +GA  
Sbjct: 321 CHSLAATIKACHTLKIFRLTRSQLDDDKARILIRSLLDHP-VLEELDLSHNLIGDRGARG 379

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  
Sbjct: 380 AAKLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTHLVSLNLRLNCIEDEGGQALAHA 438

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  L++VL  +  + ++ L    IG  G + + + +  N
Sbjct: 439 LQTNKCLTTLHLGGNELSEPTATLLAQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDN 498

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
            T+   DLR + +  E    + Q+     EA
Sbjct: 499 KTLLEFDLRLSDVAQESEYLIGQALHANREA 529



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 2/189 (1%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A  IK C +L    L  + + D+ A  +  +L  +  +  +DL  N I  +GA   A++
Sbjct: 324 LAATIKACHTLKIFRLTRSQLDDDKARILIRSLLDHPVLEELDLSHNLIGDRGARGAAKL 383

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  +S +  L+LA N + A GA++L+  L  + ++ +L L    I   G + +A  L+ N
Sbjct: 384 LS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTHLVSLNLRLNCIEDEGGQALAHALQTN 442

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
             ++ L L  N L +  A  LAQ    +N  LTSI+L+ N I  DG   + + +  N+ +
Sbjct: 443 KCLTTLHLGGNELSEPTATLLAQVL-AINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTL 501

Query: 559 AVTSLNLAN 567
               L L++
Sbjct: 502 LEFDLRLSD 510



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    L  SL  +   EE+  +
Sbjct: 309 FEWNLFLFTYRDCHSLAATIKACHTLKIFRLTRSQLDDDKARILIRSLLDHPVLEELDLS 368

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +    +L S+  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 369 HNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTHLVSLNLRLNCI 427

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T LA+ L  N+T+ S++L+ N+ G  G
Sbjct: 428 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLAQVLAINTTLTSINLSCNHIGLDG 487

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 488 GKQLLEGMSDNKTLLEFDLRLSDVAQE 514


>gi|118369613|ref|XP_001018010.1| Protein kinase domain containing protein [Tetrahymena thermophila]
 gi|89299777|gb|EAR97765.1| Protein kinase domain containing protein [Tetrahymena thermophila
            SB210]
          Length = 1884

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 103/349 (29%), Positives = 169/349 (48%), Gaps = 34/349 (9%)

Query: 279  LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG--GALGANALAKGLEGNKSLRELH 336
            L L+ N ID    T + + L +   +  L+L  +Y   G  GA  ++  L+         
Sbjct: 1501 LCLDQNQIDQESAT-IKDTLEKCQDLTQLNLYFHYNEIGKEGAQQISNALQMQYCKNFNF 1559

Query: 337  LHGNSIGDEGIRALMSGLSSRKGKLAVL--DIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
            +  N+I  EG  ++   L +    +  L  DI +N IS KG   +A  +  C+++  +NL
Sbjct: 1560 ISENNINHEGASSIQKALENICQNITKLNIDIRSNEISDKGVQSIANSLPKCQNITLLNL 1619

Query: 395  YM--NDIGDEGAEKIADALKQNRTITTIDLGG---------------NNIHSKGASAIAR 437
             +  N IGD+G + ++ A++Q   I  +DL                 N+I+ +GA +I  
Sbjct: 1620 DLSSNKIGDKGIQSVSTAIQQLHKIIQLDLNFSFVLVINISNIIFSLNDIYDEGAKSIIN 1679

Query: 438  VLKDNSVITSL--DLAYNPIGADGAKALSEVLKFHGNIN--TLKLGWCQIGASGAEFVAD 493
             L  NS I  L  +L+ N IG DG + +SE L    NI    L L   QI   GA+ +A+
Sbjct: 1680 SLDKNSNIQQLKLNLSQNKIGDDGIQNISECLIKSQNITHLCLNLQENQISDCGAQSIAN 1739

Query: 494  MLRYNNTISILDLR-ANGLRDEGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGAFAIAQA 551
             L     I+ L+L   N + DEGAK ++ +  K  N  L +++L  N+  DDGA +IA A
Sbjct: 1740 ALEKCQNITQLNLDLGNSITDEGAKIISNALEKCQNVTLLNLNLNENQFGDDGAQSIANA 1799

Query: 552  LKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYE---MSEKEVNIFF 597
            L+  + +   +LNL  N   K  Q  + + + ++ E   ++E ++NI F
Sbjct: 1800 LQKCQKITQLNLNLQAN---KISQEVVNNIELMLKECQNITELKLNIEF 1845



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 149/313 (47%), Gaps = 28/313 (8%)

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH-- 338
            + N+  D+S +       ++N    +L L  N  G  GA  + K L   ++L EL L+  
Sbjct: 986  VKNDSFDHSKYAETLVNAIQNIKYLTLDLRQNQIGDAGAQNIVKSLAKCENLVELDLNLD 1045

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM-- 396
             N+IG+EGI  +   L           I  N I            + C S L    Y   
Sbjct: 1046 WNNIGEEGIYNIDKALQ----------INKNIIRLNICLE-----QFCLSSLQTKFYQLG 1090

Query: 397  NDIGDEGAEKIADALKQNRTIT--TIDLGGNNIHSKGASAIARVLK--DNSVITSLDLAY 452
            N+IGD+G + IA A++Q++ IT  T+ L  N I  KGA +I + L+   N     LDL+ 
Sbjct: 1091 NNIGDQGVQSIAKAIQQSQKITELTLKLDWNQIGHKGAQSILKALEKCQNLRQLHLDLSS 1150

Query: 453  NPIGADGAKALSEVLKFHGNINTLKLGWCQIGAS--GAEFVADMLRYNNTISILDLRA-- 508
            N IG + A+  ++  K   NI  L +     G S  GA+ ++D L+Y   ++ L+L    
Sbjct: 1151 NNIGDETAQVFTKTFKKCQNITQLSIYLMNNGISNQGAQSISDALKYIQNVTQLNLSLAY 1210

Query: 509  NGLRDEGAKCLAQSFKVVNE-ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
            N +   GA+ +A+ F+   + +   +DL  N+I + G   IA +L  ++++    L + +
Sbjct: 1211 NKIDHIGAQKIAKVFENCQKISQLCLDLRINKIGNQGIKEIANSLNKSQNITRLDLIIGS 1270

Query: 568  NFLTKFGQSALTD 580
            N++T  G S + +
Sbjct: 1271 NYITHEGASIIAE 1283



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 113/448 (25%), Positives = 202/448 (45%), Gaps = 58/448 (12%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGY--NQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            + ++D+     GD G   + +SL    N    +++   N I   GI   D  LQ N  + 
Sbjct: 1009 YLTLDLRQNQIGDAGAQNIVKSLAKCENLVELDLNLDWNNIGEEGIYNIDKALQINKNII 1068

Query: 222  TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR--VL 279
             LN+           CL    + +   +  QL + ++ D+G ++IA+ ++ +  +    L
Sbjct: 1069 RLNI-----------CLEQFCLSSLQTKFYQLGN-NIGDQGVQSIAKAIQQSQKITELTL 1116

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGALGANALAKGLEGNKSLREL-- 335
            +L+ N I + G  S+ +AL +   +R LHL+   N  G   A    K  +  +++ +L  
Sbjct: 1117 KLDWNQIGHKGAQSILKALEKCQNLRQLHLDLSSNNIGDETAQVFTKTFKKCQNITQLSI 1176

Query: 336  HLHGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCK--SLLWI 392
            +L  N I ++G +++   L   +    + L +  N I   GA  +A+  +NC+  S L +
Sbjct: 1177 YLMNNGISNQGAQSISDALKYIQNVTQLNLSLAYNKIDHIGAQKIAKVFENCQKISQLCL 1236

Query: 393  NLYMNDIGDEGAEKIADALKQNRTITTIDL--GGNNIHSKGASAIARVLKDNSVITSLDL 450
            +L +N IG++G ++IA++L +++ IT +DL  G N I  +GAS IA  L+    IT L+L
Sbjct: 1237 DLRINKIGNQGIKEIANSLNKSQNITRLDLIIGSNYITHEGASIIAETLEKCQNITQLNL 1296

Query: 451  ----------------AYNPIGADGAKALSEV-LKFHGNINTLK---LGWCQIGASGAEF 490
                             Y  I       L  + + F  NI   K   + +  IG  G + 
Sbjct: 1297 DLEQFFFFVKVKIQIINYLQINYQQPTNLHFLFVDFECNILGFKIQCISYSDIGCDGVQA 1356

Query: 491  VADMLRYNNTISILDLRA--NGLRDEGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGAFA 547
            + + L     I  L+L    N + D+G + ++ +F K +N    S D + N+I ++   +
Sbjct: 1357 IVNALTRCQNIRELNLNLDWNKIDDKGVQDISNAFQKCLNIKKLSFDSSPNKIAEEEPQS 1416

Query: 548  IAQALKANEDVAVTSLNLANNFLTKFGQ 575
            I  +L          L +  N   KF Q
Sbjct: 1417 IPPSL----------LEIQENIELKFDQ 1434



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 105/395 (26%), Positives = 179/395 (45%), Gaps = 40/395 (10%)

Query: 217  NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSIL 276
            NI   TL+L  N IGD G + +   L     +  L L+ +D  + G + I       +I 
Sbjct: 1006 NIKYLTLDLRQNQIGDAGAQNIVKSLAKCENLVELDLN-LDWNNIGEEGIY------NID 1058

Query: 277  RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL- 335
            + L++N N+I  +    L +  L +   +   L GN  G  G  ++AK ++ ++ + EL 
Sbjct: 1059 KALQINKNIIRLN--ICLEQFCLSSLQTKFYQL-GNNIGDQGVQSIAKAIQQSQKITELT 1115

Query: 336  -HLHGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
              L  N IG +G ++++  L   +    + LD+ +N+I  + A    +  K C+++  ++
Sbjct: 1116 LKLDWNQIGHKGAQSILKALEKCQNLRQLHLDLSSNNIGDETAQVFTKTFKKCQNITQLS 1175

Query: 394  LYM--NDIGDEGAEKIADALK--QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL- 448
            +Y+  N I ++GA+ I+DALK  QN T   + L  N I   GA  IA+V ++   I+ L 
Sbjct: 1176 IYLMNNGISNQGAQSISDALKYIQNVTQLNLSLAYNKIDHIGAQKIAKVFENCQKISQLC 1235

Query: 449  -DLAYNPIGADGAKALSEVLKFHGNINTLKL--GWCQIGASGAEFVADMLRYNNTISILD 505
             DL  N IG  G K ++  L    NI  L L  G   I   GA  +A+ L     I+ L+
Sbjct: 1236 LDLRINKIGNQGIKEIANSLNKSQNITRLDLIIGSNYITHEGASIIAETLEKCQNITQLN 1295

Query: 506  L-------------------RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
            L                   + N  +      L   F+          +++++I  DG  
Sbjct: 1296 LDLEQFFFFVKVKIQIINYLQINYQQPTNLHFLFVDFECNILGFKIQCISYSDIGCDGVQ 1355

Query: 547  AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            AI  AL   +++   +LNL  N +   G   +++A
Sbjct: 1356 AIVNALTRCQNIRELNLNLDWNKIDDKGVQDISNA 1390



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 84/294 (28%), Positives = 141/294 (47%), Gaps = 57/294 (19%)

Query: 184  ESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ--SNIALKTLNLSGNPIGDEGVKCLCD- 240
            E++  N T   +   +N I+  G+++    L    NI L  L+LS N IGD+G++ +   
Sbjct: 1578 ENICQNITKLNIDIRSNEISDKGVQSIANSLPKCQNITLLNLDLSSNKIGDKGIQSVSTA 1637

Query: 241  ----------------ILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN-- 282
                            +LV N  +  +  S  D+ DEGAK+I   L  NS ++ L+LN  
Sbjct: 1638 IQQLHKIIQLDLNFSFVLVIN--ISNIIFSLNDIYDEGAKSIINSLDKNSNIQQLKLNLS 1695

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGALGANALAKGLEGNKSLRELHLHGN 340
             N I   G  +++E L+++  I  L LN   N     GA ++A  LE  +++ +L+L   
Sbjct: 1696 QNKIGDDGIQNISECLIKSQNITHLCLNLQENQISDCGAQSIANALEKCQNITQLNL--- 1752

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LWINLYMND 398
                                    D+GN SI+ +GA  ++  ++ C+++  L +NL  N 
Sbjct: 1753 ------------------------DLGN-SITDEGAKIISNALEKCQNVTLLNLNLNENQ 1787

Query: 399  IGDEGAEKIADALKQNRTITTIDLG--GNNIHSKGASAIARVLKDNSVITSLDL 450
             GD+GA+ IA+AL++ + IT ++L    N I  +  + I  +LK+   IT L L
Sbjct: 1788 FGDDGAQSIANALQKCQKITQLNLNLQANKISQEVVNNIELMLKECQNITELKL 1841



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 24/251 (9%)

Query: 354  LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM--NDIGDEGAEKIADAL 411
            LS  K     L +  N I  + A  + + ++ C+ L  +NLY   N+IG EGA++I++AL
Sbjct: 1491 LSLIKQSQLTLCLDQNQIDQESA-TIKDTLEKCQDLTQLNLYFHYNEIGKEGAQQISNAL 1549

Query: 412  KQNRTITTIDLGGNNIHSKGASAIARVLKD---NSVITSLDLAYNPIGADGAKALSEVLK 468
            +         +  NNI+ +GAS+I + L++   N    ++D+  N I   G ++++  L 
Sbjct: 1550 QMQYCKNFNFISENNINHEGASSIQKALENICQNITKLNIDIRSNEISDKGVQSIANSLP 1609

Query: 469  FHGNINTLKLGWC--QIGASGAEFVADMLRYNNTISILDLR---------------ANGL 511
               NI  L L     +IG  G + V+  ++  + I  LDL                 N +
Sbjct: 1610 KCQNITLLNLDLSSNKIGDKGIQSVSTAIQQLHKIIQLDLNFSFVLVINISNIIFSLNDI 1669

Query: 512  RDEGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
             DEGAK +  S  K  N     ++L+ N+I DDG   I++ L  ++++    LNL  N +
Sbjct: 1670 YDEGAKSIINSLDKNSNIQQLKLNLSQNKIGDDGIQNISECLIKSQNITHLCLNLQENQI 1729

Query: 571  TKFGQSALTDA 581
            +  G  ++ +A
Sbjct: 1730 SDCGAQSIANA 1740



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 71/256 (27%)

Query: 360  KLAVLDIGNNSISAKGAFHVAEYIKNCKSL--LWINLYMNDIGDEGAEKIADALKQNRTI 417
            K   LD+  N I   GA ++ + +  C++L  L +NL  N+IG+EG   I  AL+ N+ I
Sbjct: 1008 KYLTLDLRQNQIGDAGAQNIVKSLAKCENLVELDLNLDWNNIGEEGIYNIDKALQINKNI 1067

Query: 418  TTIDLG----------------GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
              +++                 GNNI  +G  +IA+ ++ +  IT L             
Sbjct: 1068 IRLNICLEQFCLSSLQTKFYQLGNNIGDQGVQSIAKAIQQSQKITEL------------- 1114

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQ 521
                         TLKL W QIG  GA+ +   L                     KC  Q
Sbjct: 1115 -------------TLKLDWNQIGHKGAQSILKALE--------------------KC--Q 1139

Query: 522  SFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
            + + ++     +DL+ N I D+ A    +  K  +++   S+ L NN ++  G  +++DA
Sbjct: 1140 NLRQLH-----LDLSSNNIGDETAQVFTKTFKKCQNITQLSIYLMNNGISNQGAQSISDA 1194

Query: 582  KDLVYEMSEKEVNIFF 597
               +  +++  +++ +
Sbjct: 1195 LKYIQNVTQLNLSLAY 1210



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 119/531 (22%), Positives = 228/531 (42%), Gaps = 115/531 (21%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFG--DEGLFFLAESLGY--NQTAEEVSFAANGITA 204
            E+ Q   +  K+ +  + + +   N G  ++G   ++++L Y  N T   +S A N I  
Sbjct: 1156 ETAQVFTKTFKKCQNITQLSIYLMNNGISNQGAQSISDALKYIQNVTQLNLSLAYNKIDH 1215

Query: 205  AGIKAFDGVLQS--NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL--SSVDLRD 260
             G +    V ++   I+   L+L  N IG++G+K + + L  +  + RL L   S  +  
Sbjct: 1216 IGAQKIAKVFENCQKISQLCLDLRINKIGNQGIKEIANSLNKSQNITRLDLIIGSNYITH 1275

Query: 261  EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR-----SLH------- 308
            EGA  IAE L+      + +LN ++  +  F  +   ++    I      +LH       
Sbjct: 1276 EGASIIAETLEKCQ--NITQLNLDLEQFFFFVKVKIQIINYLQINYQQPTNLHFLFVDFE 1333

Query: 309  ----------LNGNYGGALGANALAKGLEGNKSLRELHLH--GNSIGDEGIRALMSGLS- 355
                      ++ +  G  G  A+   L   +++REL+L+   N I D+G++ + +    
Sbjct: 1334 CNILGFKIQCISYSDIGCDGVQAIVNALTRCQNIRELNLNLDWNKIDDKGVQDISNAFQK 1393

Query: 356  ----------SRKGKLA----------VLDIGNN-------------SISAK-GAF---- 377
                      S   K+A          +L+I  N             ++SA+ G F    
Sbjct: 1394 CLNIKKLSFDSSPNKIAEEEPQSIPPSLLEIQENIELKFDQEQAEIVNMSAESGNFLTDL 1453

Query: 378  ----HVAEYIKNCKSLLWINLYMND---IGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
                H  E   N K+LL  +   ND   I      K    +KQ++   T+ L  N I  +
Sbjct: 1454 NEYQHTNESTINIKNLLDKDKTQNDCETINKHFLNKTLSLIKQSQL--TLCLDQNQIDQE 1511

Query: 431  GASAIARVLKDNSVITSLDL--AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
             A+ I   L+    +T L+L   YN IG +GA+ +S         N L++ +C+      
Sbjct: 1512 SAT-IKDTLEKCQDLTQLNLYFHYNEIGKEGAQQIS---------NALQMQYCK----NF 1557

Query: 489  EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALT--SIDLAFNEIRDDGAF 546
             F+++               N +  EGA  + ++ + + + +T  +ID+  NEI D G  
Sbjct: 1558 NFISE---------------NNINHEGASSIQKALENICQNITKLNIDIRSNEISDKGVQ 1602

Query: 547  AIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVYEMSEKEVNIFF 597
            +IA +L   +++ + +L+L++N +   G  +++ A   ++++ + ++N  F
Sbjct: 1603 SIANSLPKCQNITLLNLDLSSNKIGDKGIQSVSTAIQQLHKIIQLDLNFSF 1653


>gi|320166995|gb|EFW43894.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 643

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 85/151 (56%), Gaps = 1/151 (0%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           D GA+A+A  LK N +L  L L  + I   G  ++AE L  N+T+  LHL  N  G  GA
Sbjct: 3   DAGAQAVANALKYNPLLEELFLQFHKIGDDGARAIAETLKVNTTLTMLHLGENLIGDAGA 62

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            A+A+ L+ NKSL  LHL  N IGD G+RAL   L      L  L + NN I   GA  +
Sbjct: 63  RAIAEALKVNKSLIILHLPENQIGDAGVRALAEALKVNT-TLKRLALQNNQIGDAGAQAL 121

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
           AE +    +L  + +Y+N IGD GA+ IAD+
Sbjct: 122 AEALTVNTTLTELCMYLNQIGDAGAQAIADS 152



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 91/158 (57%), Gaps = 1/158 (0%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +GD GA+ +A+ALK N  +  + L  + I   GA AIA  LK N+ +T L L  N IG  
Sbjct: 1   MGDAGAQAVANALKYNPLLEELFLQFHKIGDDGARAIAETLKVNTTLTMLHLGENLIGDA 60

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA+A++E LK + ++  L L   QIG +G   +A+ L+ N T+  L L+ N + D GA+ 
Sbjct: 61  GARAIAEALKVNKSLIILHLPENQIGDAGVRALAEALKVNTTLKRLALQNNQIGDAGAQA 120

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           LA++   VN  LT + +  N+I D GA AIA +    E
Sbjct: 121 LAEAL-TVNTTLTELCMYLNQIGDAGAQAIADSWPTPE 157



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 85/156 (54%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG +A    L+ N  L+ L L  + IGD+G + + + L  N  +  L L    + D GA+
Sbjct: 4   AGAQAVANALKYNPLLEELFLQFHKIGDDGARAIAETLKVNTTLTMLHLGENLIGDAGAR 63

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE LK N  L +L L  N I  +G  +LAEAL  N+T++ L L  N  G  GA ALA+
Sbjct: 64  AIAEALKVNKSLIILHLPENQIGDAGVRALAEALKVNTTLKRLALQNNQIGDAGAQALAE 123

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK 360
            L  N +L EL ++ N IGD G +A+     + + +
Sbjct: 124 ALTVNTTLTELCMYLNQIGDAGAQAIADSWPTPESR 159



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 83/149 (55%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  VA  +K    L  + L  + IGD+GA  IA+ LK N T+T + LG N I   GA A
Sbjct: 5   GAQAVANALKYNPLLEELFLQFHKIGDDGARAIAETLKVNTTLTMLHLGENLIGDAGARA 64

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           IA  LK N  +  L L  N IG  G +AL+E LK +  +  L L   QIG +GA+ +A+ 
Sbjct: 65  IAEALKVNKSLIILHLPENQIGDAGVRALAEALKVNTTLKRLALQNNQIGDAGAQALAEA 124

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSF 523
           L  N T++ L +  N + D GA+ +A S+
Sbjct: 125 LTVNTTLTELCMYLNQIGDAGAQAIADSW 153



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 87/179 (48%), Gaps = 29/179 (16%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A+A  L+ N  L EL L  + IGD+G RA                         
Sbjct: 2   GDAGAQAVANALKYNPLLEELFLQFHKIGDDGARA------------------------- 36

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
               +AE +K   +L  ++L  N IGD GA  IA+ALK N+++  + L  N I   G  A
Sbjct: 37  ----IAETLKVNTTLTMLHLGENLIGDAGARAIAEALKVNKSLIILHLPENQIGDAGVRA 92

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
           +A  LK N+ +  L L  N IG  GA+AL+E L  +  +  L +   QIG +GA+ +AD
Sbjct: 93  LAEALKVNTTLKRLALQNNQIGDAGAQALAEALTVNTTLTELCMYLNQIGDAGAQAIAD 151



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 86/179 (48%), Gaps = 9/179 (5%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G   +A +L YN   EE+    + I   G +A    L+ N  L  L+L  N IGD 
Sbjct: 1   MGDAGAQAVANALKYNPLLEELFLQFHKIGDDGARAIAETLKVNTTLTMLHLGENLIGDA 60

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G + + + L  N  +  L L    + D G +A+AE LK N+ L+ L L NN I  +G  +
Sbjct: 61  GARAIAEALKVNKSLIILHLPENQIGDAGVRALAEALKVNTTLKRLALQNNQIGDAGAQA 120

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALA--------KGLEGNKSLRELH-LHGNSIG 343
           LAEAL  N+T+  L +  N  G  GA A+A        +G     S+   H LH N  G
Sbjct: 121 LAEALTVNTTLTELCMYLNQIGDAGAQAIADSWPTPESRGFRQWSSIEMTHMLHVNIFG 179



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 75/127 (59%), Gaps = 3/127 (2%)

Query: 455 IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDE 514
           +G  GA+A++  LK++  +  L L + +IG  GA  +A+ L+ N T+++L L  N + D 
Sbjct: 1   MGDAGAQAVANALKYNPLLEELFLQFHKIGDDGARAIAETLKVNTTLTMLHLGENLIGDA 60

Query: 515 GAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFG 574
           GA+ +A++ KV N++L  + L  N+I D G  A+A+ALK N    +  L L NN +   G
Sbjct: 61  GARAIAEALKV-NKSLIILHLPENQIGDAGVRALAEALKVN--TTLKRLALQNNQIGDAG 117

Query: 575 QSALTDA 581
             AL +A
Sbjct: 118 AQALAEA 124


>gi|119624671|gb|EAX04266.1| hypothetical protein MGC33600 [Homo sapiens]
          Length = 521

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 100/187 (53%), Gaps = 2/187 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L 
Sbjct: 276 FEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 335

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N 
Sbjct: 336 QNLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNC 393

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG D
Sbjct: 394 IEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLD 453

Query: 459 GAKALSE 465
           G K L E
Sbjct: 454 GGKQLLE 460



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 292 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 344

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 345 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 403

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 404 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 462

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 463 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 494



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 2/194 (1%)

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           +    +A  IK C +L    L  + + D+ A  I  +L  +  +  +DL  N I  +GA 
Sbjct: 286 RDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGAR 345

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
             A++L  +S +  L+LA N + A GA++L+  L  + N+ +L L    I   G + +A 
Sbjct: 346 GAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAH 404

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L+ N  ++ L L  N L +  A  L+Q    +N  LTSI+L+ N I  DG   + + + 
Sbjct: 405 ALQTNKCLTTLHLGGNELSEPTATLLSQVL-AINTTLTSINLSCNHIGLDGGKQLLEGMS 463

Query: 554 ANEDVAVTSLNLAN 567
            N+ +    L L++
Sbjct: 464 DNKTLLEFDLRLSD 477



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 2/209 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 290 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARGAA 348

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 349 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 407

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 408 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 467

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +   DLR + +  E    + Q+     EA
Sbjct: 468 LLEFDLRLSDVAQESEYLIGQALYANREA 496



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 313 DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 371

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 372 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 431

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 432 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 481


>gi|357290865|gb|AET73465.1| hypothetical protein EMVG_00179 [Emiliania huxleyi virus PS401]
          Length = 335

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 1/151 (0%)

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
           GA  IA  LK N  IT + L  NN    GA A+A  L+ N+ +T+L L  N IGA+GAKA
Sbjct: 127 GANAIARFLKSNEVITELVLVDNNFPVAGAKALASALRVNTALTNLVLWDNNIGAEGAKA 186

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           L+  L+ +  +  L+LG   IG  GA+ +A  LR N  ++ LDL  NG+ + GA+ LA +
Sbjct: 187 LASALRINEVLTLLELGRNGIGDEGAKALASTLRVNKVLTELDLTNNGITNTGAEALASA 246

Query: 523 FKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            + VN +L S+ L  N I ++GA A+A AL+
Sbjct: 247 LR-VNGSLKSLWLPNNRIGNEGAVALASALR 276



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 90/153 (58%), Gaps = 3/153 (1%)

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGA 488
           + GA+AIAR LK N VIT L L  N     GAKAL+  L+ +  +  L L    IGA GA
Sbjct: 125 TAGANAIARFLKSNEVITELVLVDNNFPVAGAKALASALRVNTALTNLVLWDNNIGAEGA 184

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           + +A  LR N  +++L+L  NG+ DEGAK LA + +V N+ LT +DL  N I + GA A+
Sbjct: 185 KALASALRINEVLTLLELGRNGIGDEGAKALASTLRV-NKVLTELDLTNNGITNTGAEAL 243

Query: 549 AQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           A AL+ N   ++ SL L NN +   G  AL  A
Sbjct: 244 ASALRVNG--SLKSLWLPNNRIGNEGAVALASA 274



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 21/199 (10%)

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A ++K+ + +  + L  N+    GA+ +A AL+ N  +T + L  NNI ++GA A
Sbjct: 127 GANAIARFLKSNEVITELVLVDNNFPVAGAKALASALRVNTALTNLVLWDNNIGAEGAKA 186

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A  L+ N V+T L+L  N IG +GAKAL+  L+ +  +  L L    I  +GAE +A  
Sbjct: 187 LASALRINEVLTLLELGRNGIGDEGAKALASTLRVNKVLTELDLTNNGITNTGAEALASA 246

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKV----------------VNE-ALTSIDLAF 537
           LR N ++  L L  N + +EGA  LA + +V                V+E  LT +DL F
Sbjct: 247 LRVNGSLKSLWLPNNRIGNEGAVALASALRVEIRFLYPPASEKPRISVSEGGLTKLDLRF 306

Query: 538 NEI----RDDGAFAIAQAL 552
           N       D+G  AI  A+
Sbjct: 307 NSFCRAYNDEGRKAINDAV 325



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 91/200 (45%), Gaps = 22/200 (11%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +A  L  N+   E+    N    AG KA    L+ N AL  L L  N IG EG K L   
Sbjct: 131 IARFLKSNEVITELVLVDNNFPVAGAKALASALRVNTALTNLVLWDNNIGAEGAKALASA 190

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N  +  L+L    + DEGAKA+A  L+ N +L  L+L NN I  +G  +LA AL  N
Sbjct: 191 LRINEVLTLLELGRNGIGDEGAKALASTLRVNKVLTELDLTNNGITNTGAEALASALRVN 250

Query: 302 STIRSLHLNGNYGGALGANALAKGLE------------------GNKSLRELHLHGNSI- 342
            +++SL L  N  G  GA ALA  L                       L +L L  NS  
Sbjct: 251 GSLKSLWLPNNRIGNEGAVALASALRVEIRFLYPPASEKPRISVSEGGLTKLDLRFNSFC 310

Query: 343 ---GDEGIRALMSGLSSRKG 359
               DEG +A+   +S R+G
Sbjct: 311 RAYNDEGRKAINDAVSQRRG 330



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 94/221 (42%), Gaps = 27/221 (12%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG  A    L+SN  +  L L  N     G K L   L  N  +  L L   ++  EGAK
Sbjct: 126 AGANAIARFLKSNEVITELVLVDNNFPVAGAKALASALRVNTALTNLVLWDNNIGAEGAK 185

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           A+A  L+ N +L +LEL  N I   G  +LA  L  N  +  L L  N     GA ALA 
Sbjct: 186 ALASALRINEVLTLLELGRNGIGDEGAKALASTLRVNKVLTELDLTNNGITNTGAEALAS 245

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRALMSGL----------SSRKGKLAVLDIGNNSISAK 374
            L  N SL+ L L  N IG+EG  AL S L          +S K +++V + G   +   
Sbjct: 246 ALRVNGSLKSLWLPNNRIGNEGAVALASALRVEIRFLYPPASEKPRISVSEGGLTKLD-- 303

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                          L  N +     DEG + I DA+ Q R
Sbjct: 304 ---------------LRFNSFCRAYNDEGRKAINDAVSQRR 329


>gi|194377816|dbj|BAG63271.1| unnamed protein product [Homo sapiens]
          Length = 501

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQ 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 474



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 2/194 (1%)

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           +    +A  IK C +L    L  + + D+ A  I  +L  +  +  +DL  N I  +GA 
Sbjct: 266 RDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGAR 325

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
             A++L  +S +  L+LA N + A GA++L+  L  + N+ +L L    I   G + +A 
Sbjct: 326 GAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAH 384

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L+ N  ++ L L  N L +  A  L+Q    +N  LTSI+L+ N I  DG   + + + 
Sbjct: 385 ALQTNKCLTTLHLGGNELSEPTATLLSQVL-AINTTLTSINLSCNHIGLDGGKQLLEGMS 443

Query: 554 ANEDVAVTSLNLAN 567
            N+ +    L L++
Sbjct: 444 DNKTLLEFDLRLSD 457



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 2/209 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 270 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARGAA 328

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 329 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 387

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 388 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 447

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +   DLR + +  E    + Q+     EA
Sbjct: 448 LLEFDLRLSDVAQESEYLIGQALYANREA 476



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 293 DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 351

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 352 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 411

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 412 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 461


>gi|426353363|ref|XP_004044166.1| PREDICTED: T-complex-associated testis-expressed protein 1 [Gorilla
           gorilla gorilla]
          Length = 501

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLHHPVLEELDLSQ 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+ +  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLHHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 474



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 2/194 (1%)

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           +    +A  IK C +L    L  + + D+ A  I  +L  +  +  +DL  N I  +GA 
Sbjct: 266 RDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLHHPVLEELDLSQNLIGDRGAR 325

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
             A++L  +S +  L+LA N + A GA++L+  L  + N+ +L L    I   G + +A 
Sbjct: 326 GAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAH 384

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L+ N  ++ L L  N L +  A  L+Q    +N  LTSI+L+ N I  DG   + + + 
Sbjct: 385 ALQTNKCLTTLHLGGNELSEPTATLLSQVL-AINTTLTSINLSCNHIGLDGGKQLLEGMS 443

Query: 554 ANEDVAVTSLNLAN 567
            N+ +    L L++
Sbjct: 444 DNKTLLEFDLRLSD 457



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 2/209 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 270 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLHHP-VLEELDLSQNLIGDRGARGAA 328

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 329 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 387

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 388 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 447

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +   DLR + +  E    + Q+     EA
Sbjct: 448 LLEFDLRLSDVAQESEYLIGQALYANREA 476



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL ++   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 293 DDKARIIIRSLLHHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 351

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 352 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 411

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 412 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 461


>gi|114607607|ref|XP_518509.2| PREDICTED: T-complex-associated testis-expressed protein 1 [Pan
           troglodytes]
          Length = 501

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQ 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  N+
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANQ 474



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 2/168 (1%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  N IGD GA   A  L  +R +  ++L  N + + GA ++A  L  N+ + SL+L 
Sbjct: 312 LDLSQNLIGDRGARGAAKLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLR 370

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I  +G +AL+  L+ +  + TL LG  ++    A  ++ +L  N T++ ++L  N +
Sbjct: 371 LNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHI 430

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
             +G K L +     N+ L   DL  +++  +  + I QAL AN++ A
Sbjct: 431 GLDGGKQLLEGMSD-NKTLLEFDLRLSDVAQESEYLIGQALYANQEAA 477



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 2/209 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 270 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARGAA 328

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 329 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 387

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 388 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 447

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +   DLR + +  E    + Q+     EA
Sbjct: 448 LLEFDLRLSDVAQESEYLIGQALYANQEA 476



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 2/194 (1%)

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           +    +A  IK C +L    L  + + D+ A  I  +L  +  +  +DL  N I  +GA 
Sbjct: 266 RDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGAR 325

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
             A++L  +S +  L+LA N + A GA++L+  L  + N+ +L L    I   G + +A 
Sbjct: 326 GAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAH 384

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L+ N  ++ L L  N L +  A  L+Q    +N  LTSI+L+ N I  DG   + + + 
Sbjct: 385 ALQTNKCLTTLHLGGNELSEPTATLLSQVL-AINTTLTSINLSCNHIGLDGGKQLLEGMS 443

Query: 554 ANEDVAVTSLNLAN 567
            N+ +    L L++
Sbjct: 444 DNKTLLEFDLRLSD 457



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 293 DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 351

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 352 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 411

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 412 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 461


>gi|156355238|ref|XP_001623578.1| predicted protein [Nematostella vectensis]
 gi|156210293|gb|EDO31478.1| predicted protein [Nematostella vectensis]
          Length = 410

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 141/280 (50%), Gaps = 9/280 (3%)

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL-------HLHGNSI 342
           G  ++A AL+ N+++  L+L+ N+ G  GA+ +A+ L  N  + +L        +  N +
Sbjct: 46  GSKAIAIALVSNTSVVKLNLSDNWMGPEGASYVAEMLRENCYITDLLCEVLSDDMSENKL 105

Query: 343 GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
           GD G  ++   L      +  L    N    K A  +AE IK    L ++ L  N  G++
Sbjct: 106 GDHGSESIADVLLHNP-NIHRLTANGNGFDEKAAKILAEAIKLNNRLKYLCLSHNKFGEK 164

Query: 403 GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
              ++A AL  N TI+ ++L  N++ ++GA AIA  LK+N  +  L+LA+N  G DGA A
Sbjct: 165 AGLELAPALAANETISELNLSWNHLRNRGACAIALSLKENITLKILNLAWNGFGNDGALA 224

Query: 463 LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
           + E LK + ++  L L   +I A GA  +   L  N T+ +L +  N ++  GA  +  +
Sbjct: 225 MGEALKVNASLLELDLTNNRITAEGAVLLGKGLTINTTLQVLKIGKNPMQSAGAYAILNA 284

Query: 523 FKVVNE-ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
            K   E AL  ++L+   + +D      + + A  +V +T
Sbjct: 285 MKNNPESALVEVELSDITVNNDFLQLCGEVIAARPNVKIT 324



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 10/294 (3%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N    EV    +G+ A G KA    L SN ++  LNLS N +G EG   + ++L +N  +
Sbjct: 29  NMLEAEVDIKHHGLGAMGSKAIAIALVSNTSVVKLNLSDNWMGPEGASYVAEMLRENCYI 88

Query: 249 ERL-------QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
             L        +S   L D G+++IA++L +N  +  L  N N  D      LAEA+  N
Sbjct: 89  TDLLCEVLSDDMSENKLGDHGSESIADVLLHNPNIHRLTANGNGFDEKAAKILAEAIKLN 148

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           + ++ L L+ N  G      LA  L  N+++ EL+L  N + + G  A+   L      L
Sbjct: 149 NRLKYLCLSHNKFGEKAGLELAPALAANETISELNLSWNHLRNRGACAIALSLKENI-TL 207

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
            +L++  N     GA  + E +K   SLL ++L  N I  EGA  +   L  N T+  + 
Sbjct: 208 KILNLAWNGFGNDGALAMGEALKVNASLLELDLTNNRITAEGAVLLGKGLTINTTLQVLK 267

Query: 422 LGGNNIHSKGASAIARVLKDN--SVITSLDLAYNPIGADGAKALSEVLKFHGNI 473
           +G N + S GA AI   +K+N  S +  ++L+   +  D  +   EV+    N+
Sbjct: 268 IGKNPMQSAGAYAILNAMKNNPESALVEVELSDITVNNDFLQLCGEVIAARPNV 321



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 108/197 (54%), Gaps = 10/197 (5%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL--- 448
           +++  + +G  G++ IA AL  N ++  ++L  N +  +GAS +A +L++N  IT L   
Sbjct: 35  VDIKHHGLGAMGSKAIAIALVSNTSVVKLNLSDNWMGPEGASYVAEMLRENCYITDLLCE 94

Query: 449 ----DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
               D++ N +G  G++++++VL  + NI+ L           A+ +A+ ++ NN +  L
Sbjct: 95  VLSDDMSENKLGDHGSESIADVLLHNPNIHRLTANGNGFDEKAAKILAEAIKLNNRLKYL 154

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            L  N   ++    LA +    NE ++ ++L++N +R+ GA AIA +LK  E++ +  LN
Sbjct: 155 CLSHNKFGEKAGLELAPAL-AANETISELNLSWNHLRNRGACAIALSLK--ENITLKILN 211

Query: 565 LANNFLTKFGQSALTDA 581
           LA N     G  A+ +A
Sbjct: 212 LAWNGFGNDGALAMGEA 228



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 102/228 (44%), Gaps = 8/228 (3%)

Query: 129 NWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGY 188
           NW    G    + +  ++ RE+    +   + L    S DMS    GD G   +A+ L +
Sbjct: 68  NWMGPEG----ASYVAEMLRENCYITDLLCEVL----SDDMSENKLGDHGSESIADVLLH 119

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N     ++   NG      K     ++ N  LK L LS N  G++    L   L  N  +
Sbjct: 120 NPNIHRLTANGNGFDEKAAKILAEAIKLNNRLKYLCLSHNKFGEKAGLELAPALAANETI 179

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
             L LS   LR+ GA AIA  LK N  L++L L  N     G  ++ EAL  N+++  L 
Sbjct: 180 SELNLSWNHLRNRGACAIALSLKENITLKILNLAWNGFGNDGALAMGEALKVNASLLELD 239

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           L  N   A GA  L KGL  N +L+ L +  N +   G  A+++ + +
Sbjct: 240 LTNNRITAEGAVLLGKGLTINTTLQVLKIGKNPMQSAGAYAILNAMKN 287



 Score = 43.1 bits (100), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 4/158 (2%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
              S +++S  +  + G   +A SL  N T + ++ A NG    G  A    L+ N +L 
Sbjct: 177 ETISELNLSWNHLRNRGACAIALSLKENITLKILNLAWNGFGNDGALAMGEALKVNASLL 236

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN--SILRVL 279
            L+L+ N I  EG   L   L  N  ++ L++    ++  GA AI   +KNN  S L  +
Sbjct: 237 ELDLTNNRITAEGAVLLGKGLTINTTLQVLKIGKNPMQSAGAYAILNAMKNNPESALVEV 296

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           EL++  ++        E +     ++  H  G  GGAL
Sbjct: 297 ELSDITVNNDFLQLCGEVIAARPNVKITH--GGSGGAL 332


>gi|229577123|ref|NP_872345.2| T-complex-associated testis-expressed protein 1 [Homo sapiens]
 gi|74755678|sp|Q5JU00.1|TCTE1_HUMAN RecName: Full=T-complex-associated testis-expressed protein 1;
           Short=Tcte-1
          Length = 501

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L  
Sbjct: 257 EWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQ 316

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N I
Sbjct: 317 NLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG DG
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 460 AKALSE 465
            K L E
Sbjct: 435 GKQLLE 440



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 474



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 2/194 (1%)

Query: 374 KGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
           +    +A  IK C +L    L  + + D+ A  I  +L  +  +  +DL  N I  +GA 
Sbjct: 266 RDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGAR 325

Query: 434 AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVAD 493
             A++L  +S +  L+LA N + A GA++L+  L  + N+ +L L    I   G + +A 
Sbjct: 326 GAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAH 384

Query: 494 MLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
            L+ N  ++ L L  N L +  A  L+Q    +N  LTSI+L+ N I  DG   + + + 
Sbjct: 385 ALQTNKCLTTLHLGGNELSEPTATLLSQVL-AINTTLTSINLSCNHIGLDGGKQLLEGMS 443

Query: 554 ANEDVAVTSLNLAN 567
            N+ +    L L++
Sbjct: 444 DNKTLLEFDLRLSD 457



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 2/209 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA   A
Sbjct: 270 SLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARGAA 328

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  L+
Sbjct: 329 KLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQ 387

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 388 TNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKT 447

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +   DLR + +  E    + Q+     EA
Sbjct: 448 LLEFDLRLSDVAQESEYLIGQALYANREA 476



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    +  SL  +   EE+  + N I   G +    +L S+  L+ LNL+ N +   G 
Sbjct: 293 DDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGA 351

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +A+A  L+ N  L  L L  N +     T L+
Sbjct: 352 QSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLS 411

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ S++L+ N+ G  G   L +G+  NK+L E  L  + +  E
Sbjct: 412 QVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQE 461


>gi|292610042|ref|XP_687605.4| PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like
           [Danio rerio]
          Length = 920

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 134/272 (49%), Gaps = 7/272 (2%)

Query: 318 GANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
           G   LA  L  N S LREL L  N +GD G++ L +GL     KL  L +    +S +G 
Sbjct: 616 GCADLASALRSNSSNLRELDLSWNEVGDSGVKRLSAGLKDPHCKLEKLVLRCCGVSVEGC 675

Query: 377 FHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASA 434
             +A  ++ N  +L  + L  N +GD G + ++  LK  +  +  + LG   +  KG +A
Sbjct: 676 AALASVLRSNSSNLRELELSENKVGDSGVKLLSAGLKDPQCKLEKLWLGYCGVSDKGCAA 735

Query: 435 IARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVA 492
           +A  L+ NS  +  L+L+ N +G  G K LS  LK  H  +  L+L  C +   G   +A
Sbjct: 736 LASALRSNSSNLRELELSENKVGDSGVKRLSAGLKDPHCKLEKLRLRDCGVSVEGCADLA 795

Query: 493 DMLRYNNT-ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
             LR N++ +  L+L  N + D G K L+   K  +  L  + L +  + D+G  A+A A
Sbjct: 796 SALRSNSSNLRELNLSKNKVGDSGVKLLSAGLKDPHCKLEKLLLRYCGVSDEGCAALASA 855

Query: 552 LKANEDVAVTSLNLANNFLTKFGQSALTDAKD 583
           L++N    +  LNL  N L   G   L+  +D
Sbjct: 856 LRSNSP-NLRELNLKWNKLGSSGVKLLSGLRD 886



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 130/264 (49%), Gaps = 11/264 (4%)

Query: 156 EFAKELRAFSS----VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAF 210
           + A  LR+ SS    +D+S    GD G+  L+  L       E++     G++  G  A 
Sbjct: 619 DLASALRSNSSNLRELDLSWNEVGDSGVKRLSAGLKDPHCKLEKLVLRCCGVSVEGCAAL 678

Query: 211 DGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAE 268
             VL+SN + L+ L LS N +GD GVK L   L D    +E+L L    + D+G  A+A 
Sbjct: 679 ASVLRSNSSNLRELELSENKVGDSGVKLLSAGLKDPQCKLEKLWLGYCGVSDKGCAALAS 738

Query: 269 LLKNNSI-LRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGL 326
            L++NS  LR LEL+ N +  SG   L+  L + +  +  L L        G   LA  L
Sbjct: 739 ALRSNSSNLRELELSENKVGDSGVKRLSAGLKDPHCKLEKLRLRDCGVSVEGCADLASAL 798

Query: 327 EGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK- 384
             N S LREL+L  N +GD G++ L +GL     KL  L +    +S +G   +A  ++ 
Sbjct: 799 RSNSSNLRELNLSKNKVGDSGVKLLSAGLKDPHCKLEKLLLRYCGVSDEGCAALASALRS 858

Query: 385 NCKSLLWINLYMNDIGDEGAEKIA 408
           N  +L  +NL  N +G  G + ++
Sbjct: 859 NSPNLRELNLKWNKLGSSGVKLLS 882



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 133/269 (49%), Gaps = 8/269 (2%)

Query: 260 DEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGAL 317
           D+G   +A  L++NS  LR L+L+ N +  SG   L+  L + +  +  L L        
Sbjct: 614 DKGCADLASALRSNSSNLRELDLSWNEVGDSGVKRLSAGLKDPHCKLEKLVLRCCGVSVE 673

Query: 318 GANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
           G  ALA  L  N S LREL L  N +GD G++ L +GL   + KL  L +G   +S KG 
Sbjct: 674 GCAALASVLRSNSSNLRELELSENKVGDSGVKLLSAGLKDPQCKLEKLWLGYCGVSDKGC 733

Query: 377 FHVAEYIK-NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASA 434
             +A  ++ N  +L  + L  N +GD G ++++  LK     +  + L    +  +G + 
Sbjct: 734 AALASALRSNSSNLRELELSENKVGDSGVKRLSAGLKDPHCKLEKLRLRDCGVSVEGCAD 793

Query: 435 IARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVA 492
           +A  L+ NS  +  L+L+ N +G  G K LS  LK  H  +  L L +C +   G   +A
Sbjct: 794 LASALRSNSSNLRELNLSKNKVGDSGVKLLSAGLKDPHCKLEKLLLRYCGVSDEGCAALA 853

Query: 493 DMLRYNNT-ISILDLRANGLRDEGAKCLA 520
             LR N+  +  L+L+ N L   G K L+
Sbjct: 854 SALRSNSPNLRELNLKWNKLGSSGVKLLS 882


>gi|399497946|emb|CCG20301.1| Ran GTPase activating protein 2 [Solanum cardiophyllum]
          Length = 553

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L+K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLSKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNVNLISEEGVDELKEIFK 492



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLSKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNVNLISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 136/260 (52%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    LS+ L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLSKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASC-IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 113/250 (45%), Gaps = 7/250 (2%)

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI-----GNNSISAKGAFHVAE 381
           E   S  ++     S G +  R     L++ K +L  +D+     G N   A    ++  
Sbjct: 149 EPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFS 208

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
                 +L ++NL  N +G++G       L+    +  + L  + I  + A+A++ ++  
Sbjct: 209 EALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPS 268

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
              +  L    N  G +GA A++E++K    +   +    ++G+ G   + + L   + +
Sbjct: 269 TEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHL 328

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
             LDLR N    E    L+++    +E LT I L++  + D+GA AIA ALK +   ++ 
Sbjct: 329 KKLDLRDNMFGPEVGLVLSKALS-KHENLTEIYLSYLNLEDEGAIAIANALK-DSAPSLA 386

Query: 562 SLNLANNFLT 571
            L +A N +T
Sbjct: 387 VLEMAGNDIT 396



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              L   L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLSKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNVNLISEEGVDELKEIFKKSPEML 498


>gi|356536033|ref|XP_003536545.1| PREDICTED: RAN GTPase-activating protein 2-like isoform 1 [Glycine
           max]
 gi|356536035|ref|XP_003536546.1| PREDICTED: RAN GTPase-activating protein 2-like isoform 2 [Glycine
           max]
          Length = 533

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 138/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I  E  + +C+++     ++ L   
Sbjct: 217 LNLSDNALGEKGVRAFGALLKSQKCLEELYLMNDGISKEAARAVCELIPFTEKLKVLHFH 276

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  I   G  +L++AL   + ++ L L  N  
Sbjct: 277 NNMTGDEGALAIAEVVKRSPLLEDFRCSSTRIGAEGGVALSDALGSCAHLKKLDLRDNML 336

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G  +L+K L  +  LRE++L   ++ D+G  A++  L      L VL++  N  +A 
Sbjct: 337 GVDGGVSLSKALSKHAELREVYLSYLNLEDDGAIAIVDALKESAPHLEVLEMSGNDSTAD 396

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  ++  + L  +NL  N++ DEGA+ I  A++ +  +  IDL  N I   GA  
Sbjct: 397 AAPAIAACLEAKQFLSKLNLSENELKDEGAKLITKAIEGHVQLKEIDLSTNQIRKDGAQQ 456

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A  +   +    L++  N I  +G   L ++ K
Sbjct: 457 LAVTVVQKADFKLLNINGNFISDEGIDELKDIFK 490



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 153/332 (46%), Gaps = 22/332 (6%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFT---SLAEAL---------LENSTIRSLHL 309
           GA  +AE      IL  ++     +D S F    S  EAL         LE S +RSL+L
Sbjct: 165 GAAQVAE-----PILTAIKDQLKEVDLSDFIAGRSEVEALDVMKIFSTALEGSVLRSLNL 219

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N  G  G  A    L+  K L EL+L  + I  E  RA+   L     KL VL   NN
Sbjct: 220 SDNALGEKGVRAFGALLKSQKCLEELYLMNDGISKEAARAVCE-LIPFTEKLKVLHFHNN 278

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
               +GA  +AE +K    L         IG EG   ++DAL     +  +DL  N +  
Sbjct: 279 MTGDEGALAIAEVVKRSPLLEDFRCSSTRIGAEGGVALSDALGSCAHLKKLDLRDNMLGV 338

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGA 488
            G  ++++ L  ++ +  + L+Y  +  DGA A+ + LK    ++  L++      A  A
Sbjct: 339 DGGVSLSKALSKHAELREVYLSYLNLEDDGAIAIVDALKESAPHLEVLEMSGNDSTADAA 398

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
             +A  L     +S L+L  N L+DEGAK + ++ +  +  L  IDL+ N+IR DGA  +
Sbjct: 399 PAIAACLEAKQFLSKLNLSENELKDEGAKLITKAIEG-HVQLKEIDLSTNQIRKDGAQQL 457

Query: 549 AQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           A  +    D  +  LN+  NF++  G   L D
Sbjct: 458 AVTVVQKADFKL--LNINGNFISDEGIDELKD 487



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 201/467 (43%), Gaps = 66/467 (14%)

Query: 94  PAGVFVSATFVLWKLVEKLLMPKPSR-PSKPTAEGMNWSVGAGTNLLSGFT----GKLF- 147
           P G   SA  +  K   KLL+    R PSK   E +  SV       S F      + F 
Sbjct: 74  PDGDGGSAVQLYAKECSKLLLDVLKRGPSKKDDEEVVASVNTTAPHESVFDISKGQRAFI 133

Query: 148 --RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV---------- 195
              E++Q L+   +   +F+ +  S R+FG          LG  Q AE +          
Sbjct: 134 EADEAQQLLSPLKEPGNSFTKICFSNRSFG----------LGAAQVAEPILTAIKDQLKE 183

Query: 196 ----SFAA--NGITAAGI-KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
                F A  + + A  + K F   L+ ++ L++LNLS N +G++GV+    +L     +
Sbjct: 184 VDLSDFIAGRSEVEALDVMKIFSTALEGSV-LRSLNLSDNALGEKGVRAFGALLKSQKCL 242

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           E L L +  +  E A+A+ EL+     L+VL  +NNM    G  ++AE +  +  +    
Sbjct: 243 EELYLMNDGISKEAARAVCELIPFTEKLKVLHFHNNMTGDEGALAIAEVVKRSPLLEDFR 302

Query: 309 LNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            +    GA G  AL+  L     L++L L  N +G +G  +L   LS       V     
Sbjct: 303 CSSTRIGAEGGVALSDALGSCAHLKKLDLRDNMLGVDGGVSLSKALSKHAELREVY---- 358

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNI 427
                               L ++NL      D+GA  I DALK++   +  +++ GN+ 
Sbjct: 359 --------------------LSYLNLE-----DDGAIAIVDALKESAPHLEVLEMSGNDS 393

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
            +  A AIA  L+    ++ L+L+ N +  +GAK +++ ++ H  +  + L   QI   G
Sbjct: 394 TADAAPAIAACLEAKQFLSKLNLSENELKDEGAKLITKAIEGHVQLKEIDLSTNQIRKDG 453

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
           A+ +A  +       +L++  N + DEG   L   FK   + L  +D
Sbjct: 454 AQQLAVTVVQKADFKLLNINGNFISDEGIDELKDIFKKSPDMLGPLD 500


>gi|399497838|emb|CCG20247.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 134/274 (48%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  + QS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EA    S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAHGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            +  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 ASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +      +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L +       L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAHGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ +SAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L   +  L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAF-GKLFQSQTNLEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +    
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAH 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E +  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEASSAIASCI-AAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 143/319 (44%), Gaps = 17/319 (5%)

Query: 275 ILRVLELNNNMIDYSGFTS---LAEAL---------LENSTIRSLHLNGNYGGALGANAL 322
           IL  L+     +D S F +    AEAL         LE S ++ L+L+ N  G  G  A 
Sbjct: 175 ILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAF 234

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
            K  +   +L EL L  + I  E   A+ S L     KL VL   NN    +GA  +AE 
Sbjct: 235 GKLFQSQTNLEELFLMNDGISQEAANAV-SELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K    L         +G EG   + +A      +  +DL  N    +    + + L  +
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEAHGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTI 501
             +T + L+Y  +  +GA A++  LK    ++  L++    I A  +  +A  +     +
Sbjct: 354 ENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLL 413

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
           + L L  N L+DEGA  +A++ +  +  L  +D++ N +R  GA  +AQ +   ++  + 
Sbjct: 414 AKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKL- 471

Query: 562 SLNLANNFLTKFGQSALTD 580
            LN+  NF+++ G   L +
Sbjct: 472 -LNVNGNFISEEGVDELKE 489



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 140/306 (45%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+    +        EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E     S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEAHGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S +++++  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQ-LLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  K L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQKLLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G        +    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + +     + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEAHGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD---AKDLVYEMS 589
           +GA AIA ALK +   ++  L +A N +T    SA+     AK L+ ++S
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLS 417


>gi|294718615|gb|ADF32020.1| leucine rich repeat containing protein 1 [Azumapecten farreri]
          Length = 588

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 123/240 (51%), Gaps = 4/240 (1%)

Query: 293 SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMS 352
           ++A  L +N T+  L+LNGN+    G  A+A+ LE N  + E+ L  N +G  G ++L  
Sbjct: 203 AMALVLKDNVTLEKLNLNGNWIEGPGGEAMARMLEENDYISEVCLSDNRLGTTGAKSLCR 262

Query: 353 GLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
            L    G L  +D+ +N+          E + N K L  +NL  N  G++  E +  A+ 
Sbjct: 263 MLGVNTG-LRKIDLSDNAFEDGDVEFFVEMLDNNKYLKSLNLSRNRFGEQAGELLGPAIA 321

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
            N  + ++DL  N++  KGA ++AR LK+N  + +  LA+N  G +G  A+++ L  + +
Sbjct: 322 SNDILDSLDLSWNHLRQKGAVSVARGLKENVRLKNCSLAWNGFGPEGGAAIADALVTNNS 381

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           +  + +   ++ A  A  +A  +  N+ I +L +  N L   GA  LA   + +NE  +S
Sbjct: 382 LQEIDISGNRLNADVAVKIAKAIAVNDNIRVLRMGNNLLTTIGAIALA---RAINETESS 438



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 122/275 (44%), Gaps = 29/275 (10%)

Query: 193 EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ 252
           +E+    +G+     KA   VL+ N+ L+ LNL+GN I   G + +  +L +N  +  + 
Sbjct: 187 QELVMRYHGLGPVAAKAMALVLKDNVTLEKLNLNGNWIEGPGGEAMARMLEENDYISEVC 246

Query: 253 LSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           LS   L   GAK++  +L  N+ LR ++L++N  +        E L  N  ++SL+L+ N
Sbjct: 247 LSDNRLGTTGAKSLCRMLGVNTGLRKIDLSDNAFEDGDVEFFVEMLDNNKYLKSLNLSRN 306

Query: 313 YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSIS 372
             G      L   +  N  L  L L  N +  +G  ++  GL                  
Sbjct: 307 RFGEQAGELLGPAIASNDILDSLDLSWNHLRQKGAVSVARGLKENV-------------- 352

Query: 373 AKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGA 432
                     +KNC SL W     N  G EG   IADAL  N ++  ID+ GN +++  A
Sbjct: 353 ---------RLKNC-SLAW-----NGFGPEGGAAIADALVTNNSLQEIDISGNRLNADVA 397

Query: 433 SAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
             IA+ +  N  I  L +  N +   GA AL+  +
Sbjct: 398 VKIAKAIAVNDNIRVLRMGNNLLTTIGAIALARAI 432



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 121/276 (43%), Gaps = 31/276 (11%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +A  L  N T E+++   N I   G +A   +L+ N  +  + LS N +G  G K LC +
Sbjct: 204 MALVLKDNVTLEKLNLNGNWIEGPGGEAMARMLEENDYISEVCLSDNRLGTTGAKSLCRM 263

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N G+ ++ LS     D   +   E+L NN  L+ L L+ N         L  A+  N
Sbjct: 264 LGVNTGLRKIDLSDNAFEDGDVEFFVEMLDNNKYLKSLNLSRNRFGEQAGELLGPAIASN 323

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             + SL L+ N+    GA ++A+GL+ N  L+   L  N  G EG  A+   L +    L
Sbjct: 324 DILDSLDLSWNHLRQKGAVSVARGLKENVRLKNCSLAWNGFGPEGGAAIADALVT-NNSL 382

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             +DI  N ++A  A                             KIA A+  N  I  + 
Sbjct: 383 QEIDISGNRLNADVAV----------------------------KIAKAIAVNDNIRVLR 414

Query: 422 LGGNNIHSKGASAIARVLK--DNSVITSLDLAYNPI 455
           +G N + + GA A+AR +   ++S +  LDL   P+
Sbjct: 415 MGNNLLTTIGAIALARAINETESSEMEELDLTDVPV 450



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 5/197 (2%)

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           +G   A+ +A  LK N T+  ++L GN I   G  A+AR+L++N  I+ + L+ N +G  
Sbjct: 196 LGPVAAKAMALVLKDNVTLEKLNLNGNWIEGPGGEAMARMLEENDYISEVCLSDNRLGTT 255

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GAK+L  +L  +  +  + L          EF  +ML  N  +  L+L  N   ++  + 
Sbjct: 256 GAKSLCRMLGVNTGLRKIDLSDNAFEDGDVEFFVEMLDNNKYLKSLNLSRNRFGEQAGEL 315

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           L  +    N+ L S+DL++N +R  GA ++A+ LK N  V + + +LA N     G +A+
Sbjct: 316 LGPAI-ASNDILDSLDLSWNHLRQKGAVSVARGLKEN--VRLKNCSLAWNGFGPEGGAAI 372

Query: 579 TDAKDLVYEMSEKEVNI 595
            DA  LV   S +E++I
Sbjct: 373 ADA--LVTNNSLQEIDI 387



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 141/334 (42%), Gaps = 42/334 (12%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
            S V +S    G  G   L   LG N    ++  + N      ++ F  +L +N  LK+L
Sbjct: 242 ISEVCLSDNRLGTTGAKSLCRMLGVNTGLRKIDLSDNAFEDGDVEFFVEMLDNNKYLKSL 301

Query: 224 NLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNN 283
           NLS N  G++  + L   +  N  ++ L LS   LR +GA ++A  LK N  L+   L  
Sbjct: 302 NLSRNRFGEQAGELLGPAIASNDILDSLDLSWNHLRQKGAVSVARGLKENVRLKNCSLAW 361

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N     G  ++A+AL+ N++++ + ++GN   A  A  +AK +  N ++R          
Sbjct: 362 NGFGPEGGAAIADALVTNNSLQEIDISGNRLNADVAVKIAKAIAVNDNIR---------- 411

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
                              VL +GNN ++  GA  +A  I   +S     L + D+  E 
Sbjct: 412 -------------------VLRMGNNLLTTIGAIALARAINETESSEMEELDLTDVPVEF 452

Query: 404 A-EKIADALKQNRTITTIDLG-----GNNIHSKGASAIARVLKDNSVITSLD-LAYNPIG 456
              +I + +K  RT   +  G     GN +   G  AI    + + V+   D +  N + 
Sbjct: 453 EFLRICEDIKMKRTNFKVTHGPILRSGNTMEDLGKPAIDPFKRKDPVMVLQDHIVVNDM- 511

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
                 L ++LK H    TL++   Q  A+  E 
Sbjct: 512 -----RLLDILKRHDPDETLQVTPEQFMAALDEL 540



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 6/128 (4%)

Query: 450 LAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRAN 509
           + Y+ +G   AKA++ VLK +  +  L L    I   G E +A ML  N+ IS + L  N
Sbjct: 191 MRYHGLGPVAAKAMALVLKDNVTLEKLNLNGNWIEGPGGEAMARMLEENDYISEVCLSDN 250

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
            L   GAK L +    VN  L  IDL+ N   D       + L  N+   + SLNL+ N 
Sbjct: 251 RLGTTGAKSLCRMLG-VNTGLRKIDLSDNAFEDGDVEFFVEMLDNNK--YLKSLNLSRN- 306

Query: 570 LTKFGQSA 577
             +FG+ A
Sbjct: 307 --RFGEQA 312


>gi|399497842|emb|CCG20249.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 134/269 (49%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   +    
Sbjct: 224 NALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTKKLKVLHFHNNMTG 283

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  G    
Sbjct: 284 DEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVG 343

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+ A  +
Sbjct: 344 LVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAI 403

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  +A+ +
Sbjct: 404 ASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTV 463

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLK 468
                   L+++ N I  +G   L E+ K
Sbjct: 464 LHKEEFKLLNVSGNFISEEGVDELKEIFK 492



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK  NLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFPNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTKKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA++LK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + +     +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKLLNVSGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+  +L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFPNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + K L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTKKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 29/232 (12%)

Query: 148 RESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI 207
           +E+   ++E     +    +       GDEG   +AE +  +   E+   ++  + + G 
Sbjct: 256 QEAANAVSELVPSTKKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGG 315

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
                 L     LK L+L  N  G E    LC  L  +  +  + LS ++L DEGA AIA
Sbjct: 316 SVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIA 375

Query: 268 ELLKNNS-----------------------------ILRVLELNNNMIDYSGFTSLAEAL 298
             LK+++                             +L  L L  N +   G   +A+AL
Sbjct: 376 NSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKAL 435

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
             +S +  + ++ N     GA  LA+ +   +  + L++ GN I +EG+  L
Sbjct: 436 EGHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKLLNVSGNFISEEGVDEL 487


>gi|401414813|ref|XP_003871903.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488124|emb|CBZ23370.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 442

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 167/351 (47%), Gaps = 32/351 (9%)

Query: 208 KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIA 267
           K +  VLQ       ++L+G  +G  G   +   L  N  V  L LS  +L D GA AIA
Sbjct: 29  KKWKSVLQET----RVDLAGRALGPRGALIVGAALSKNTYVTSLDLSQNELGDGGAIAIA 84

Query: 268 ELLKNNSILRVLEL-NNNMIDYSGFTSLAEALLEN-----------STIRSLHLNGNYGG 315
            +L+ N+ L+ L L +N+M D  G  +LA A + N            T+ SL L GN  G
Sbjct: 85  SMLRVNTQLQHLNLSHNDMTDIGGI-ALASAFIPNVSPSGQPGQWNRTLFSLVLMGNKFG 143

Query: 316 ALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
                A++     ++ L  + L  N++G  G + LM   + ++  L V  +  N++  +G
Sbjct: 144 DDTLLAMSNAAACHRDLTRVDLSWNNVGQNGTKCLMR--AYQRNPLCVYQLAANALGDEG 201

Query: 376 AFHVAEYIKNC--KSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGAS 433
             ++ E ++    KS   +NLY N I   G E +   L  +  +  + L GN I  KG  
Sbjct: 202 TVYLCEALQRYGGKSQTTLNLYRNSISCPGTEAVGRLLANSSIVQDVSLAGNTIGFKGVQ 261

Query: 434 AIARVLKDNSVITS-----LDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASG 487
           A+ R L D +VI S     L+L+ N IG +GA +++ ++K +  ++  L +   +I   G
Sbjct: 262 ALQRQLTDAAVIASCTLRILNLSNNWIGDEGAASVAAIIKANIPSLERLDVSENKITDVG 321

Query: 488 AEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE--ALTSIDLA 536
           A  +      N  + +L+  AN L    AK +    +++ E   LTS+++A
Sbjct: 322 ATAIVTAALQNTHLLLLNCEANRLE---AKAVDAVVRLIRETRTLTSLNVA 369



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 147/319 (46%), Gaps = 19/319 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA---- 219
            +S+D+S    GD G   +A  L  N   + ++ + N +T  G  A       N++    
Sbjct: 65  VTSLDLSQNELGDGGAIAIASMLRVNTQLQHLNLSHNDMTDIGGIALASAFIPNVSPSGQ 124

Query: 220 -------LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
                  L +L L GN  GD+ +  + +    +  + R+ LS  ++   G K +    + 
Sbjct: 125 PGQWNRTLFSLVLMGNKFGDDTLLAMSNAAACHRDLTRVDLSWNNVGQNGTKCLMRAYQR 184

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLE--NSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           N +  V +L  N +   G   L EAL      +  +L+L  N     G  A+ + L  + 
Sbjct: 185 NPLC-VYQLAANALGDEGTVYLCEALQRYGGKSQTTLNLYRNSISCPGTEAVGRLLANSS 243

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSS----RKGKLAVLDIGNNSISAKGAFHVAEYIK-N 385
            ++++ L GN+IG +G++AL   L+         L +L++ NN I  +GA  VA  IK N
Sbjct: 244 IVQDVSLAGNTIGFKGVQALQRQLTDAAVIASCTLRILNLSNNWIGDEGAASVAAIIKAN 303

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             SL  +++  N I D GA  I  A  QN  +  ++   N + +K   A+ R++++   +
Sbjct: 304 IPSLERLDVSENKITDVGATAIVTAALQNTHLLLLNCEANRLEAKAVDAVVRLIRETRTL 363

Query: 446 TSLDLAYNPIGADGAKALS 464
           TSL++A     AD  + L+
Sbjct: 364 TSLNVAGCVNSADHRRTLT 382



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 22/239 (9%)

Query: 355 SSRKGKLAVLDIGNNSISAKGAFHVAEYI-KNCKSLLW---INLYMNDIGDEGAEKIADA 410
           S+RK K  V   G     AKG    A Y  K  KS+L    ++L    +G  GA  +  A
Sbjct: 4   SARKKKDKVPAPG-----AKGEKSTAFYTRKKWKSVLQETRVDLAGRALGPRGALIVGAA 58

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL--- 467
           L +N  +T++DL  N +   GA AIA +L+ N+ +  L+L++N +   G  AL+      
Sbjct: 59  LSKNTYVTSLDLSQNELGDGGAIAIASMLRVNTQLQHLNLSHNDMTDIGGIALASAFIPN 118

Query: 468 --------KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
                   +++  + +L L   + G      +++    +  ++ +DL  N +   G KCL
Sbjct: 119 VSPSGQPGQWNRTLFSLVLMGNKFGDDTLLAMSNAAACHRDLTRVDLSWNNVGQNGTKCL 178

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
            ++++     L    LA N + D+G   + +AL+     + T+LNL  N ++  G  A+
Sbjct: 179 MRAYQ--RNPLCVYQLAANALGDEGTVYLCEALQRYGGKSQTTLNLYRNSISCPGTEAV 235


>gi|320165388|gb|EFW42287.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 373

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 101/173 (58%), Gaps = 3/173 (1%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +KN K  L  +L    IGD  A+ IA+ALK N T+T + L  N I + GA AIA  L+ N
Sbjct: 12  VKNAKKHL--DLAERQIGDAEAQAIAEALKVNTTVTELSLYQNRIGATGARAIAEALQMN 69

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +T+LDL  N IGA GA+A++E LK +  +  L L   QIG +GA+ +A+ LR N T++
Sbjct: 70  KAVTTLDLRENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTVT 129

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            L L  N   D GA  +A++ KV N  L  +DL FN I   G  AI +A + N
Sbjct: 130 RLGLYQNQTGDAGALAIAEALKV-NTTLGLLDLRFNCIGKAGLQAIGEARQVN 181



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 92/158 (58%), Gaps = 1/158 (0%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           A A+A+ L+ N ++ EL L+ N IG  G RA+   L   K  +  LD+  N I A GA  
Sbjct: 31  AQAIAEALKVNTTVTELSLYQNRIGATGARAIAEALQMNKA-VTTLDLRENQIGAAGAQA 89

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +AE +K   +L  ++LY N IGD GA+ IA+AL++N+T+T + L  N     GA AIA  
Sbjct: 90  IAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTVTRLGLYQNQTGDAGALAIAEA 149

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           LK N+ +  LDL +N IG  G +A+ E  + +  + TL
Sbjct: 150 LKVNTTLGLLDLRFNCIGKAGLQAIGEARQVNRTLTTL 187



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 98/170 (57%), Gaps = 1/170 (0%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+    I    A  +AE +K   ++  ++LY N IG  GA  IA+AL+ N+ +TT+DL 
Sbjct: 19  LDLAERQIGDAEAQAIAEALKVNTTVTELSLYQNRIGATGARAIAEALQMNKAVTTLDLR 78

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I + GA AIA  LK N+ +  L L  N IG  GA+A++E L+ +  +  L L   Q 
Sbjct: 79  ENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTVTRLGLYQNQT 138

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
           G +GA  +A+ L+ N T+ +LDLR N +   G + + ++ + VN  LT++
Sbjct: 139 GDAGALAIAEALKVNTTLGLLDLRFNCIGKAGLQAIGEA-RQVNRTLTTL 187



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 108/189 (57%), Gaps = 9/189 (4%)

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
           MN    E  +K+ +A K       +DL    I    A AIA  LK N+ +T L L  N I
Sbjct: 1   MNSRQRELYDKVKNAKKH------LDLAERQIGDAEAQAIAEALKVNTTVTELSLYQNRI 54

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           GA GA+A++E L+ +  + TL L   QIGA+GA+ +A+ L+ N T+++L L  N + D G
Sbjct: 55  GATGARAIAEALQMNKAVTTLDLRENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAG 114

Query: 516 AKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQ 575
           A+ +A++ +  N+ +T + L  N+  D GA AIA+ALK N  + +  L+L  N + K G 
Sbjct: 115 AQAIAEALRE-NKTVTRLGLYQNQTGDAGALAIAEALKVNTTLGL--LDLRFNCIGKAGL 171

Query: 576 SALTDAKDL 584
            A+ +A+ +
Sbjct: 172 QAIGEARQV 180



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 30/221 (13%)

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           A K L+L+   IGD   + + + L  N  V  L L    +   GA+AIAE L+ N  +  
Sbjct: 15  AKKHLDLAERQIGDAEAQAIAEALKVNTTVTELSLYQNRIGATGARAIAEALQMNKAVTT 74

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L  N I  +G  ++AEAL  N+T+  L L  N  G  GA A+A+ L  NK++  L L+
Sbjct: 75  LDLRENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTVTRLGLY 134

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N  GD                              GA  +AE +K   +L  ++L  N 
Sbjct: 135 QNQTGD-----------------------------AGALAIAEALKVNTTLGLLDLRFNC 165

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           IG  G + I +A + NRT+TT+ L    +H +  S + R L
Sbjct: 166 IGKAGLQAIGEARQVNRTLTTL-LIDRQVHPRLFSLLPRRL 205



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 149/359 (41%), Gaps = 51/359 (14%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A   +D++ R  GD     +AE+L  N T  E+S   N I A G +A    LQ N A+ T
Sbjct: 15  AKKHLDLAERQIGDAEAQAIAEALKVNTTVTELSLYQNRIGATGARAIAEALQMNKAVTT 74

Query: 223 LNLS----------------------------GNPIGDEGVKCLCDILVDNAGVERLQLS 254
           L+L                              N IGD G + + + L +N  V RL L 
Sbjct: 75  LDLRENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTVTRLGLY 134

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
                D GA AIAE LK N+ L +L+L  N I  +G  ++ EA   N T+ +L ++    
Sbjct: 135 QNQTGDAGALAIAEALKVNTTLGLLDLRFNCIGKAGLQAIGEARQVNRTLTTLLIDRQVH 194

Query: 315 GALGANALAKGLEGNKSLREL-HL--HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
             L +  L + L   + L+ + HL   G  + D+ I      L +   +LA L I + + 
Sbjct: 195 PRLFS-LLPRRLATAEDLQNVFHLLASGQELKDQPI-----SLPALPAELAEL-IMDKAH 247

Query: 372 SAKGAFHV--AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
             +G  H   + +  + + +L + L      D G+ ++       + I      GN   S
Sbjct: 248 YWQGVQHTKRSHFYDSPERILKVTLPQRI--DGGSVRV-------KAIQVFRDMGNRFDS 298

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGW-CQIGAS 486
            G+S    ++ D       + +  P   D +  L  +L   H  I  ++ GW  Q+ AS
Sbjct: 299 NGSSRFDLIVLDEQRAVQYECSVKPTLVDSSLELVTILPASHPVIRQMRAGWQVQVRAS 357


>gi|71409601|ref|XP_807137.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70871071|gb|EAN85286.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 456

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 157/354 (44%), Gaps = 51/354 (14%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
           TL L G  I   GV  +   L+ N  V RL LS  ++ DEGA  +AE+L+ N  ++ L L
Sbjct: 62  TLELQGRKIIPRGVLIIGTALMKNKHVVRLDLSQNNIGDEGAVTMAEVLRKNETIQYLNL 121

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
             N I   G  +LA A + N     ++ NG  G            + N++L  + L GN 
Sbjct: 122 AQNGITDVGGIALASAFIPN-----VNPNGQPG------------QWNRNLFTIILAGND 164

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           +GD+ + A MS  ++    L  +D+  N++   G   +   ++    L   +L  N IGD
Sbjct: 165 LGDDTLLA-MSKAAACHRDLTSVDLSWNNVGPLGTKCLLRSMQR-NPLCVYHLMANKIGD 222

Query: 402 EGAEKIADALKQ--NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            G   + +A+++   +  TT++L  N++  KG  A+ R+L++N  I  + L  N +G  G
Sbjct: 223 AGTTCLCEAMQRFAGKGTTTLNLFRNDVRHKGCEAVGRLLENNEFILEVSLHSNTLGLKG 282

Query: 460 AKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
            + L +      N + +L LG C +G  GA   A ++  N                    
Sbjct: 283 MQLLRQHFTAAPNRVRSLNLGNCMLGDEGAPEAAALITANL------------------- 323

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
                     AL  ++LA N   DDG   I +AL  N  + + S    N F TK
Sbjct: 324 ---------PALERLNLASNGFSDDGGVIIVKALLKNTFLVMVSC-ADNTFGTK 367



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 137/303 (45%), Gaps = 25/303 (8%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL-----------Q 215
           +D+S  N GDEG   +AE L  N+T + ++ A NGIT  G  A                Q
Sbjct: 91  LDLSQNNIGDEGAVTMAEVLRKNETIQYLNLAQNGITDVGGIALASAFIPNVNPNGQPGQ 150

Query: 216 SNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELL 270
            N  L T+ L+GN +GD+ +     + +  A      L+SVDL        G K +   +
Sbjct: 151 WNRNLFTIILAGNDLGDDTL-----LAMSKAAACHRDLTSVDLSWNNVGPLGTKCLLRSM 205

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEAL--LENSTIRSLHLNGNYGGALGANALAKGLEG 328
           + N  L V  L  N I  +G T L EA+         +L+L  N     G  A+ + LE 
Sbjct: 206 QRNP-LCVYHLMANKIGDAGTTCLCEAMQRFAGKGTTTLNLFRNDVRHKGCEAVGRLLEN 264

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCK 387
           N+ + E+ LH N++G +G++ L    ++   ++  L++GN  +  +GA   A  I  N  
Sbjct: 265 NEFILEVSLHSNTLGLKGMQLLRQHFTAAPNRVRSLNLGNCMLGDEGAPEAAALITANLP 324

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           +L  +NL  N   D+G   I  AL +N  +  +    N   +K   A A ++    V+  
Sbjct: 325 ALERLNLASNGFSDDGGVIIVKALLKNTFLVMVSCADNTFGTKTVDATAELIGTAKVLKL 384

Query: 448 LDL 450
           LD 
Sbjct: 385 LDF 387



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 106/215 (49%), Gaps = 13/215 (6%)

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
           A L++    I  +G   +   +   K ++ ++L  N+IGDEGA  +A+ L++N TI  ++
Sbjct: 61  ATLELQGRKIIPRGVLIIGTALMKNKHVVRLDLSQNNIGDEGAVTMAEVLRKNETIQYLN 120

Query: 422 LGGNNIHSKGASAIARVL-----------KDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           L  N I   G  A+A              + N  + ++ LA N +G D   A+S+    H
Sbjct: 121 LAQNGITDVGGIALASAFIPNVNPNGQPGQWNRNLFTIILAGNDLGDDTLLAMSKAAACH 180

Query: 471 GNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSF-KVVNEA 529
            ++ ++ L W  +G  G + +   ++  N + +  L AN + D G  CL ++  +   + 
Sbjct: 181 RDLTSVDLSWNNVGPLGTKCLLRSMQ-RNPLCVYHLMANKIGDAGTTCLCEAMQRFAGKG 239

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            T+++L  N++R  G  A+ + L+ NE +   SL+
Sbjct: 240 TTTLNLFRNDVRHKGCEAVGRLLENNEFILEVSLH 274



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           I   G+      L  N  +  L+LS N IGDEG   + ++L  N  ++ L L+   + D 
Sbjct: 70  IIPRGVLIIGTALMKNKHVVRLDLSQNNIGDEGAVTMAEVLRKNETIQYLNLAQNGITDV 129

Query: 262 GAKAIAELL------------KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           G  A+A                N ++  ++   N++ D +   ++++A   +  + S+ L
Sbjct: 130 GGIALASAFIPNVNPNGQPGQWNRNLFTIILAGNDLGDDT-LLAMSKAAACHRDLTSVDL 188

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGK-LAVLDIGN 368
           + N  G LG   L + ++ N  L   HL  N IGD G   L   +    GK    L++  
Sbjct: 189 SWNNVGPLGTKCLLRSMQRN-PLCVYHLMANKIGDAGTTCLCEAMQRFAGKGTTTLNLFR 247

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-----ITTIDLG 423
           N +  KG   V   ++N + +L ++L+ N +G +G +     L+Q+ T     + +++LG
Sbjct: 248 NDVRHKGCEAVGRLLENNEFILEVSLHSNTLGLKGMQ----LLRQHFTAAPNRVRSLNLG 303

Query: 424 GNNIHSKGASAIARVLKDN-SVITSLDLAYNPIGADGAKALSEVL 467
              +  +GA   A ++  N   +  L+LA N    DG   + + L
Sbjct: 304 NCMLGDEGAPEAAALITANLPALERLNLASNGFSDDGGVIIVKAL 348


>gi|147882993|gb|ABQ51813.1| RAN GTPase-activating protein 2 [Nicotiana benthamiana]
          Length = 541

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L    + I  E  + + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELYFINDGISQEAARAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G ++L EAL + S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCEALGKCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L+K L  +++L E++L   ++ DEG  A+++ L      L VL++  N I+ +
Sbjct: 339 GPEAGLVLSKALSKHENLTEVYLSYLNLEDEGAIAIVNTLKDSAPSLGVLEMAGNDITEE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ D GA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AAPAIASCIAAKQFLSKLSLGENELMDGGAIQIAKALRGHNHLKEVDMNTNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +AR +        L++  N I  +G   L ++ +
Sbjct: 459 LARTVLHKDEFKLLNVNGNFISEEGIDELKDIFE 492



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 142/316 (44%), Gaps = 30/316 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L   +  +  E A+A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELYFINDGISQEAARAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G +AL + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCEALGKCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +    V                         L ++NL     
Sbjct: 336 NMFGPEAGLVLSKALSKHENLTEVY------------------------LSYLNLE---- 367

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  I + LK +  ++  +++ GN+I  + A AIA  +     ++ L L  N +   
Sbjct: 368 -DEGAIAIVNTLKDSAPSLGVLEMAGNDITEEAAPAIASCIAAKQFLSKLSLGENELMDG 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALRGHNHLKEVDMNTNALRRAGARVLARTVLHKDEFKLLNVNGNFISEEGIDE 486

Query: 519 LAQSFKVVNEALTSID 534
           L   F+   E L S++
Sbjct: 487 LKDIFEKSPELLASLE 502



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 130/258 (50%), Gaps = 6/258 (2%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L   N+ IS + A  V+E
Sbjct: 207 FSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELYFINDGISQEAARAVSE 264

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G SA+   L  
Sbjct: 265 LVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCEALGK 324

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NT 500
            S +  LDL  N  G +    LS+ L  H N+  + L +  +   GA  + + L+ +  +
Sbjct: 325 CSHLKKLDLRDNMFGPEAGLVLSKALSKHENLTEVYLSYLNLEDEGAIAIVNTLKDSAPS 384

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           + +L++  N + +E A  +A       + L+ + L  NE+ D GA  IA+AL+ +  +  
Sbjct: 385 LGVLEMAGNDITEEAAPAIASCI-AAKQFLSKLSLGENELMDGGAIQIAKALRGHNHLKE 443

Query: 561 TSLNLANNFLTKFGQSAL 578
             +N   N L + G   L
Sbjct: 444 VDMN--TNALRRAGARVL 459



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 150/316 (47%), Gaps = 6/316 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G++  E+   ++ F++ L       +++S    G++G+    + L      EE+
Sbjct: 188 LSDFVAGRVEAEALDVMSIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
            F  +GI+    +A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 YFINDGISQEAARAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG  A+ E L   S L+ L+L +NM        L++AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSALCEALGKCSHLKKLDLRDNMFGPEAGLVLSKALSKHENLTEVYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+   L+ +  SL  L + GN I +E   A+ S +++++  L+ L +G N +   
Sbjct: 368 DEGAIAIVNTLKDSAPSLGVLEMAGNDITEEAAPAIASCIAAKQF-LSKLSLGENELMDG 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L  +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALRGHNHLKEVDMNTNALRRAGARVLARTVLHKDEFKLLNVNGNFISEEGIDE 486

Query: 435 IARVL-KDNSVITSLD 449
           +  +  K   ++ SL+
Sbjct: 487 LKDIFEKSPELLASLE 502


>gi|118349133|ref|XP_001033443.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89287792|gb|EAR85780.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 911

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 172/385 (44%), Gaps = 14/385 (3%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++F  N ++  G       L+ N  +  L+LS N I  EG +   + L+ N  +  L +S
Sbjct: 305 LNFQKNILSNTGAVIVSEALKYNFNIIHLDLSSNNISPEGFQIFFESLLGNQSLISLDIS 364

Query: 255 SVD------LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
             +      L  +G++A+   LK N  L++L ++   +   G   +   L  N +I S+ 
Sbjct: 365 CKEGLNRNKLGLQGSRALEAFLKQNKTLQILNISGTSMTEDGSICVLNGLQGNKSIVSID 424

Query: 309 LNGN-YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL--MSGLSSRKGKLAVLD 365
            + N    A    A+ K    N  + EL++  N IGD GI ++  M G++S+  K   ++
Sbjct: 425 FSCNELNSAFMQEAVLKLCNSN--IIELNMANNQIGDPGIESMSQMVGVNSKFYKFQSIN 482

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           + NN I++ G     E + + ++L  I L  N+        I + L +N TI  + L   
Sbjct: 483 LNNNQITSSGVSRFFEAMHHNQTLKKIYLDQNNFYGSSINAILNYLWENNTIEVLSLNQT 542

Query: 426 NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           ++   G  A+   L+ N  +  L +  N +   GAK ++E +K    +  + L  C I  
Sbjct: 543 DLDLVGGDAVGIGLQRNLSLKELYVRDNKLKDVGAKQIAEGIKLCETLTVIDLSMCGISD 602

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
                +A+ L+ N  +S + LR N L D     L ++ K  N+ L  ID+  N I     
Sbjct: 603 DTGMLIAEGLKVNKNMSAIYLRENSLHDYTGIVLVEAAK-ENQNLQKIDIIRNPISYRFQ 661

Query: 546 FAIAQALKANEDVAVTSLNLANNFL 570
             I + L  N D+     NL  N++
Sbjct: 662 EEIQKCLDVNIDLYKK--NLVPNYI 684



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 153/328 (46%), Gaps = 41/328 (12%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAA------NGITAAGIKAFDGVLQSNIAL 220
           +D+S  N   EG     ESL  NQ+   +  +       N +   G +A +  L+ N  L
Sbjct: 333 LDLSSNNISPEGFQIFFESLLGNQSLISLDISCKEGLNRNKLGLQGSRALEAFLKQNKTL 392

Query: 221 KTLNLSGNPIGDEGVKCL----------------CDIL-----------VDNAGVERLQL 253
           + LN+SG  + ++G  C+                C+ L           + N+ +  L +
Sbjct: 393 QILNISGTSMTEDGSICVLNGLQGNKSIVSIDFSCNELNSAFMQEAVLKLCNSNIIELNM 452

Query: 254 SSVDLRDEGAKAIAELLKNNS---ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           ++  + D G +++++++  NS     + + LNNN I  SG +   EA+  N T++ ++L+
Sbjct: 453 ANNQIGDPGIESMSQMVGVNSKFYKFQSINLNNNQITSSGVSRFFEAMHHNQTLKKIYLD 512

Query: 311 GN--YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGN 368
            N  YG ++  NA+   L  N ++  L L+   +   G  A+  GL  R   L  L + +
Sbjct: 513 QNNFYGSSI--NAILNYLWENNTIEVLSLNQTDLDLVGGDAVGIGL-QRNLSLKELYVRD 569

Query: 369 NSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           N +   GA  +AE IK C++L  I+L M  I D+    IA+ LK N+ ++ I L  N++H
Sbjct: 570 NKLKDVGAKQIAEGIKLCETLTVIDLSMCGISDDTGMLIAEGLKVNKNMSAIYLRENSLH 629

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIG 456
                 +    K+N  +  +D+  NPI 
Sbjct: 630 DYTGIVLVEAAKENQNLQKIDIIRNPIS 657



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 142/331 (42%), Gaps = 39/331 (11%)

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           ++ NN  +R L    N++  +G   ++EAL  N  I  L L+ N     G     + L G
Sbjct: 296 IISNNHFVR-LNFQKNILSNTGAVIVSEALKYNFNIIHLDLSSNNISPEGFQIFFESLLG 354

Query: 329 NKSLRELH------LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG------- 375
           N+SL  L       L+ N +G +G RAL + L   K  L +L+I   S++  G       
Sbjct: 355 NQSLISLDISCKEGLNRNKLGLQGSRALEAFLKQNKT-LQILNISGTSMTEDGSICVLNG 413

Query: 376 -------------------AFHVAEYIKNCKS-LLWINLYMNDIGDEGAEKIADALKQNR 415
                              AF     +K C S ++ +N+  N IGD G E ++  +  N 
Sbjct: 414 LQGNKSIVSIDFSCNELNSAFMQEAVLKLCNSNIIELNMANNQIGDPGIESMSQMVGVNS 473

Query: 416 ---TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN 472
                 +I+L  N I S G S     +  N  +  + L  N        A+   L  +  
Sbjct: 474 KFYKFQSINLNNNQITSSGVSRFFEAMHHNQTLKKIYLDQNNFYGSSINAILNYLWENNT 533

Query: 473 INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTS 532
           I  L L    +   G + V   L+ N ++  L +R N L+D GAK +A+  K+  E LT 
Sbjct: 534 IEVLSLNQTDLDLVGGDAVGIGLQRNLSLKELYVRDNKLKDVGAKQIAEGIKLC-ETLTV 592

Query: 533 IDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           IDL+   I DD    IA+ LK N++++   L
Sbjct: 593 IDLSMCGISDDTGMLIAEGLKVNKNMSAIYL 623



 Score = 42.4 bits (98), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 95/239 (39%), Gaps = 45/239 (18%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAF------------- 210
           F S++++       G+    E++ +NQT +++    N    + I A              
Sbjct: 478 FQSINLNNNQITSSGVSRFFEAMHHNQTLKKIYLDQNNFYGSSINAILNYLWENNTIEVL 537

Query: 211 ------------DGV---LQSNIALKTLNLSGNPIGD-------EGVKCLCDILVDNAGV 248
                       D V   LQ N++LK L +  N + D       EG+K LC+ L      
Sbjct: 538 SLNQTDLDLVGGDAVGIGLQRNLSLKELYVRDNKLKDVGAKQIAEGIK-LCETLT----- 591

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL-NNNMIDYSGFTSLAEALLENSTIRSL 307
             + LS   + D+    IAE LK N  +  + L  N++ DY+G   L EA  EN  ++ +
Sbjct: 592 -VIDLSMCGISDDTGMLIAEGLKVNKNMSAIYLRENSLHDYTGIV-LVEAAKENQNLQKI 649

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGD-EGIRALMSGLSSRKGKLAVLD 365
            +  N         + K L+ N  L + +L  N I   E +R    G      +  +LD
Sbjct: 650 DIIRNPISYRFQEEIQKCLDVNIDLYKKNLVPNYINTMEELRIFEKGKYDDYQRQQMLD 708


>gi|395526338|ref|XP_003765322.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12
            [Sarcophilus harrisii]
          Length = 1084

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 160/342 (46%), Gaps = 8/342 (2%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L +N  L  L L  N +G+ GV+ LC  L   N  ++ L+L    L     + ++  L +
Sbjct: 732  LSTNRNLIELVLYRNILGNRGVRLLCQGLRHPNCQLQNLRLKRCRLSSASCQDLSSALVS 791

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L+ N +  +G   LAE L      ++ L +           AL++ L  ++ 
Sbjct: 792  NQNLTRLDLSRNSLGAAGVKLLAEGLRHPKCRLQMLQVRRGEPDWEACRALSEVLSASRH 851

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L EL L GN++GD G+R L +GLS    +L  L +    +       +A  +   ++L  
Sbjct: 852  LTELDLTGNALGDWGLRPLCAGLSHPACRLQTLWLKICHLPPSACQDLASVLSINQNLTE 911

Query: 392  INLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L +N++GD+G + + + L  +++ + T+ LG   +      A++  L+ N  + +LD+
Sbjct: 912  LDLSLNELGDQGVKLLCEGLCHSKSQLQTLRLGICRLTFVSCDALSTTLQSNIHLKALDV 971

Query: 451  AYNPIGADGAKALSEVLKFHGNINTLKLGW---CQIGASGAEFVADMLRYNNTISILDLR 507
            ++N +   G   L + L+ H N    KL W   C +  +    +A  L  N T+  L L 
Sbjct: 972  SFNDLEDLGVHLLCQGLQ-HPNCKLHKL-WLDSCSLSGAACGDLAAALGINQTLRELYLT 1029

Query: 508  ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIA 549
             N L D G + L +     N  L ++ L   E+ +    A+A
Sbjct: 1030 NNALGDAGVQLLCERLSQPNCRLRTLWLFGTELTEGTQQALA 1071



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 135/321 (42%), Gaps = 5/321 (1%)

Query: 263  AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANA 321
             + +A  L  N  L  L L  N++   G   L + L   N  +++L L      +     
Sbjct: 725  CEHLATALSTNRNLIELVLYRNILGNRGVRLLCQGLRHPNCQLQNLRLKRCRLSSASCQD 784

Query: 322  LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            L+  L  N++L  L L  NS+G  G++ L  GL   K +L +L +       +    ++E
Sbjct: 785  LSSALVSNQNLTRLDLSRNSLGAAGVKLLAEGLRHPKCRLQMLQVRRGEPDWEACRALSE 844

Query: 382  YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLK 440
             +   + L  ++L  N +GD G   +   L      + T+ L   ++       +A VL 
Sbjct: 845  VLSASRHLTELDLTGNALGDWGLRPLCAGLSHPACRLQTLWLKICHLPPSACQDLASVLS 904

Query: 441  DNSVITSLDLAYNPIGADGAKALSE-VLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
             N  +T LDL+ N +G  G K L E +      + TL+LG C++     + ++  L+ N 
Sbjct: 905  INQNLTELDLSLNELGDQGVKLLCEGLCHSKSQLQTLRLGICRLTFVSCDALSTTLQSNI 964

Query: 500  TISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVA 559
             +  LD+  N L D G   L Q  +  N  L  + L    +       +A AL  N+   
Sbjct: 965  HLKALDVSFNDLEDLGVHLLCQGLQHPNCKLHKLWLDSCSLSGAACGDLAAALGINQ--T 1022

Query: 560  VTSLNLANNFLTKFGQSALTD 580
            +  L L NN L   G   L +
Sbjct: 1023 LRELYLTNNALGDAGVQLLCE 1043



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 3/219 (1%)

Query: 149  ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGI 207
            E+ + L+E     R  + +D++G   GD GL  L   L +     + +      +  +  
Sbjct: 837  EACRALSEVLSASRHLTELDLTGNALGDWGLRPLCAGLSHPACRLQTLWLKICHLPPSAC 896

Query: 208  KAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN-AGVERLQLSSVDLRDEGAKAI 266
            +    VL  N  L  L+LS N +GD+GVK LC+ L  + + ++ L+L    L      A+
Sbjct: 897  QDLASVLSINQNLTELDLSLNELGDQGVKLLCEGLCHSKSQLQTLRLGICRLTFVSCDAL 956

Query: 267  AELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKG 325
            +  L++N  L+ L+++ N ++  G   L + L   N  +  L L+           LA  
Sbjct: 957  STTLQSNIHLKALDVSFNDLEDLGVHLLCQGLQHPNCKLHKLWLDSCSLSGAACGDLAAA 1016

Query: 326  LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            L  N++LREL+L  N++GD G++ L   LS    +L  L
Sbjct: 1017 LGINQTLRELYLTNNALGDAGVQLLCERLSQPNCRLRTL 1055



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 3/152 (1%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             + +D+S    GD+G+  L E L ++++  + +      +T     A    LQSNI LK 
Sbjct: 909  LTELDLSLNELGDQGVKLLCEGLCHSKSQLQTLRLGICRLTFVSCDALSTTLQSNIHLKA 968

Query: 223  LNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            L++S N + D GV  LC  L   N  + +L L S  L       +A  L  N  LR L L
Sbjct: 969  LDVSFNDLEDLGVHLLCQGLQHPNCKLHKLWLDSCSLSGAACGDLAAALGINQTLRELYL 1028

Query: 282  NNNMIDYSGFTSLAEALLE-NSTIRSLHLNGN 312
             NN +  +G   L E L + N  +R+L L G 
Sbjct: 1029 TNNALGDAGVQLLCERLSQPNCRLRTLWLFGT 1060


>gi|330790197|ref|XP_003283184.1| hypothetical protein DICPUDRAFT_18720 [Dictyostelium purpureum]
 gi|325086865|gb|EGC40248.1| hypothetical protein DICPUDRAFT_18720 [Dictyostelium purpureum]
          Length = 339

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 144/289 (49%), Gaps = 16/289 (5%)

Query: 152 QTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           Q + +   +L    S+++S  +   EGL  L E L  N++  +++ + NGI   G +   
Sbjct: 45  QLIKDLLPQLPQLQSINLSNISLCTEGLRMLLEYLRQNKSIRKINLSNNGIYPNGAEDIA 104

Query: 212 GVL-QSNIALKTLNLSGNPIGDEGVKCLCDILV-------DNAGVERLQLSSVDLRDEGA 263
            +L ++N ++++L+LS N I   G++ + + L          + ++ L L  + +  E +
Sbjct: 105 NILLKNNYSIESLDLSENRISLIGLRSILNALAPTDPLCKSESSLKSLYLRRMMISFEES 164

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
             I  ++     L+ L+ ++N I+      + EAL  N+TI+ L+L+ N  G  G   +A
Sbjct: 165 TLIRNMIFQTLHLKTLDFSSNQINRESLAIICEALSVNNTIQDLNLSFNIFGPQGCAEIA 224

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           K L  NKS+  LHLH   +  EG + L   L +    L  L++ NN I A G  H  + +
Sbjct: 225 KTLTQNKSISSLHLHCVGMKKEGAQVLAESLKNNHS-LTRLNLSNNEIKASGCNHFIKLL 283

Query: 384 KNCKSLLWINLYMNDIGDEGA--EKIADALKQNRTITTIDLGGNNIHSK 430
           K+  S+ +++L  N I ++ +  + +   +      T IDL GN+I+ K
Sbjct: 284 KSNHSIHYMDLSCNSIKNKSSLYQDLCKIIN-----TKIDLNGNSINQK 327



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 145/296 (48%), Gaps = 12/296 (4%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           IG + ++ + D+L     ++ + LS++ L  EG + + E L+ N  +R + L+NN I  +
Sbjct: 39  IGLDCIQLIKDLLPQLPQLQSINLSNISLCTEGLRMLLEYLRQNKSIRKINLSNNGIYPN 98

Query: 290 GFTSLAEALLENS-TIRSLHLNGNYGGALGANALAKGL-------EGNKSLRELHLHGNS 341
           G   +A  LL+N+ +I SL L+ N    +G  ++   L       +   SL+ L+L    
Sbjct: 99  GAEDIANILLKNNYSIESLDLSENRISLIGLRSILNALAPTDPLCKSESSLKSLYLRRMM 158

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I  E    L+  +  +   L  LD  +N I+ +    + E +    ++  +NL  N  G 
Sbjct: 159 ISFEE-STLIRNMIFQTLHLKTLDFSSNQINRESLAIICEALSVNNTIQDLNLSFNIFGP 217

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           +G  +IA  L QN++I+++ L    +  +GA  +A  LK+N  +T L+L+ N I A G  
Sbjct: 218 QGCAEIAKTLTQNKSISSLHLHCVGMKKEGAQVLAESLKNNHSLTRLNLSNNEIKASGCN 277

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAK 517
              ++LK + +I+ + L  C    + +    D+ +  NT   +DL  N +  +  K
Sbjct: 278 HFIKLLKSNHSIHYMDLS-CNSIKNKSSLYQDLCKIINT--KIDLNGNSINQKFYK 330



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 38/258 (14%)

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           IG + I+ L+  L  +  +L  +++ N S+  +G   + EY++  KS+  INL  N I  
Sbjct: 39  IGLDCIQ-LIKDLLPQLPQLQSINLSNISLCTEGLRMLLEYLRQNKSIRKINLSNNGIYP 97

Query: 402 EGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVL--------------------- 439
            GAE IA+ L K N +I ++DL  N I   G  +I   L                     
Sbjct: 98  NGAEDIANILLKNNYSIESLDLSENRISLIGLRSILNALAPTDPLCKSESSLKSLYLRRM 157

Query: 440 ----KDNSVI----------TSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
               +++++I           +LD + N I  +    + E L  +  I  L L +   G 
Sbjct: 158 MISFEESTLIRNMIFQTLHLKTLDFSSNQINRESLAIICEALSVNNTIQDLNLSFNIFGP 217

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            G   +A  L  N +IS L L   G++ EGA+ LA+S K  N +LT ++L+ NEI+  G 
Sbjct: 218 QGCAEIAKTLTQNKSISSLHLHCVGMKKEGAQVLAESLKN-NHSLTRLNLSNNEIKASGC 276

Query: 546 FAIAQALKANEDVAVTSL 563
               + LK+N  +    L
Sbjct: 277 NHFIKLLKSNHSIHYMDL 294


>gi|281200632|gb|EFA74850.1| hypothetical protein PPL_11884 [Polysphondylium pallidum PN500]
          Length = 1264

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 15/283 (5%)

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            + T  ++GN    +G+  + + L  +  V+ L L    L   G K IA +L+ N  L+ L
Sbjct: 957  IDTWYIAGNNFDVDGITPIAEALEKDTKVKALWLKRNPLLTVGVKPIASMLEKNCYLQTL 1016

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE-GNKSLRELHLH 338
            +L N  I   G   L  +L +N+T+++L+++ N      A  + + LE G   L  L+L 
Sbjct: 1017 DLLNCGILDQGVEILFNSLRKNTTLKNLYIDTNGLTTASAGYICQLLESGENHLDSLYLS 1076

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM-- 396
             N +GDEG + +  GL   K +L  L +G+N I   GA H+ + I    SL+ +NL    
Sbjct: 1077 CNRMGDEGAKLISQGLLVDK-QLKRLGLGSNGIGPIGAKHLVDAILVHPSLVQLNLGFTR 1135

Query: 397  ---------NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITS 447
                     N +GD GA +IA  +K N  I +IDL  N I  +G   +   LK+N ++TS
Sbjct: 1136 ATFQLGAINNVLGDSGAAEIARLIKANTHIRSIDLTHNGISQQGIGMLKDSLKNNLILTS 1195

Query: 448  LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
              LA N  G +   A  + + +    N L+ G  ++     + 
Sbjct: 1196 --LALNQFGMENNDAARQEINYALGRNRLQWGKAELNGENEDL 1236



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 4/179 (2%)

Query: 405  EKIADALKQNR--TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
            E IAD ++ N    I T  + GNN    G + IA  L+ ++ + +L L  NP+   G K 
Sbjct: 943  EAIADYIRYNEDSKIDTWYIAGNNFDVDGITPIAEALEKDTKVKALWLKRNPLLTVGVKP 1002

Query: 463  LSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQS 522
            ++ +L+ +  + TL L  C I   G E + + LR N T+  L +  NGL    A  + Q 
Sbjct: 1003 IASMLEKNCYLQTLDLLNCGILDQGVEILFNSLRKNTTLKNLYIDTNGLTTASAGYICQL 1062

Query: 523  FKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             +     L S+ L+ N + D+GA  I+Q L    D  +  L L +N +   G   L DA
Sbjct: 1063 LESGENHLDSLYLSCNRMGDEGAKLISQGLLV--DKQLKRLGLGSNGIGPIGAKHLVDA 1119



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 157/359 (43%), Gaps = 71/359 (19%)

Query: 223  LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
            L+L    +G EG++ L   +  +  ++RL L +  + + G +AIA+ ++ N         
Sbjct: 902  LDLCKQVVGPEGIRPLLGAMKKSTQIKRLLLGNNIVGNGGGEAIADYIRYN--------- 952

Query: 283  NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
                             E+S I + ++ GN     G   +A+ LE +  ++ L L  N +
Sbjct: 953  -----------------EDSKIDTWYIAGNNFDVDGITPIAEALEKDTKVKALWLKRNPL 995

Query: 343  GDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDE 402
               G++ + S L                             KNC  L  ++L    I D+
Sbjct: 996  LTVGVKPIASMLE----------------------------KNC-YLQTLDLLNCGILDQ 1026

Query: 403  GAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD-NSVITSLDLAYNPIGADGAK 461
            G E + ++L++N T+  + +  N + +  A  I ++L+   + + SL L+ N +G +GAK
Sbjct: 1027 GVEILFNSLRKNTTLKNLYIDTNGLTTASAGYICQLLESGENHLDSLYLSCNRMGDEGAK 1086

Query: 462  ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL---RA--------NG 510
             +S+ L     +  L LG   IG  GA+ + D +  + ++  L+L   RA        N 
Sbjct: 1087 LISQGLLVDKQLKRLGLGSNGIGPIGAKHLVDAILVHPSLVQLNLGFTRATFQLGAINNV 1146

Query: 511  LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
            L D GA  +A+  K  N  + SIDL  N I   G   +  +LK N  + +TSL L N F
Sbjct: 1147 LGDSGAAEIARLIK-ANTHIRSIDLTHNGISQQGIGMLKDSLKNN--LILTSLAL-NQF 1201



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 14/182 (7%)

Query: 176  DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQS-NIALKTLNLSGNPIGDEG 234
            D+G+  L  SL  N T + +    NG+T A       +L+S    L +L LS N +GDEG
Sbjct: 1025 DQGVEILFNSLRKNTTLKNLYIDTNGLTTASAGYICQLLESGENHLDSLYLSCNRMGDEG 1084

Query: 235  VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN-----------N 283
             K +   L+ +  ++RL L S  +   GAK + + +  +  L  L L            N
Sbjct: 1085 AKLISQGLLVDKQLKRLGLGSNGIGPIGAKHLVDAILVHPSLVQLNLGFTRATFQLGAIN 1144

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            N++  SG   +A  +  N+ IRS+ L  N     G   L   L+ N  L  L L  N  G
Sbjct: 1145 NVLGDSGAAEIARLIKANTHIRSIDLTHNGISQQGIGMLKDSLKNNLILTSLAL--NQFG 1202

Query: 344  DE 345
             E
Sbjct: 1203 ME 1204



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 25/151 (16%)

Query: 164  FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTL 223
              S+ +S    GDEG   +++ L  ++  + +   +NGI   G K     +  + +L  L
Sbjct: 1070 LDSLYLSCNRMGDEGAKLISQGLLVDKQLKRLGLGSNGIGPIGAKHLVDAILVHPSLVQL 1129

Query: 224  NLSGNPIGDEGVKCLCDILVDNAGVER--LQLSSVD--LRDEGAKAIAELLKNNSILRVL 279
            NL                     G  R   QL +++  L D GA  IA L+K N+ +R +
Sbjct: 1130 NL---------------------GFTRATFQLGAINNVLGDSGAAEIARLIKANTHIRSI 1168

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
            +L +N I   G   L ++L  N  + SL LN
Sbjct: 1169 DLTHNGISQQGIGMLKDSLKNNLILTSLALN 1199


>gi|198432566|ref|XP_002119235.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 535

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 58/311 (18%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GAKAIA  L +N+ +  L+L++N ++  G  ++AE L EN  I  L L+ N+ G  GA A
Sbjct: 151 GAKAIAVSLVSNTRILKLDLSDNWLNAQGGVAIAEMLKENCYISELILSDNHLGFGGAAA 210

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           L + L+ N ++  + L GN   D+G                             A  ++E
Sbjct: 211 LCETLQENVTITHVTLSGNDF-DDGT----------------------------AVPISE 241

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I + + L  ++L  N  G+ G E +  A+ +N +I  ++L  N+    GA ++A+ +  
Sbjct: 242 IIMSTQKLEQLDLSCNLFGEAGGELLGPAISENTSIKDLNLSWNHFRRNGAVSLAKGVGA 301

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
           N  +  +DL++N +G +GA AL                             D LR NN +
Sbjct: 302 NIFLKKIDLSWNGLGLEGASAL----------------------------GDALRNNNVL 333

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
             LD+  N +  EGA  LA+   + NE L  + +  N I+  G F I  AL+ N    V 
Sbjct: 334 EELDVSNNRISTEGAILLAKGL-LSNETLRILRIGKNPIQSAGGFGILTALRQNGGSVVE 392

Query: 562 SLNLANNFLTK 572
           +L+L++  + K
Sbjct: 393 TLDLSDVVVNK 403



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 134/266 (50%), Gaps = 5/266 (1%)

Query: 161 LRAFSSVDMSGRN--FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           LR     D+  R+   G  G   +A SL  N    ++  + N + A G  A   +L+ N 
Sbjct: 132 LRHMQDQDLIMRHHGLGPAGAKAIAVSLVSNTRILKLDLSDNWLNAQGGVAIAEMLKENC 191

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            +  L LS N +G  G   LC+ L +N  +  + LS  D  D  A  I+E++ +   L  
Sbjct: 192 YISELILSDNHLGFGGAAALCETLQENVTITHVTLSGNDFDDGTAVPISEIIMSTQKLEQ 251

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+ N+   +G   L  A+ EN++I+ L+L+ N+    GA +LAKG+  N  L+++ L 
Sbjct: 252 LDLSCNLFGEAGGELLGPAISENTSIKDLNLSWNHFRRNGAVSLAKGVGANIFLKKIDLS 311

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +G EG  AL   L +    L  LD+ NN IS +GA  +A+ + + ++L  + +  N 
Sbjct: 312 WNGLGLEGASALGDALRN-NNVLEELDVSNNRISTEGAILLAKGLLSNETLRILRIGKNP 370

Query: 399 IGDEGAEKIADALKQN--RTITTIDL 422
           I   G   I  AL+QN    + T+DL
Sbjct: 371 IQSAGGFGILTALRQNGGSVVETLDL 396



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 79/159 (49%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  +E    + V +SG +F D     ++E +   Q  E++  + N    AG +     
Sbjct: 211 LCETLQENVTITHVTLSGNDFDDGTAVPISEIIMSTQKLEQLDLSCNLFGEAGGELLGPA 270

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           +  N ++K LNLS N     G   L   +  N  ++++ LS   L  EGA A+ + L+NN
Sbjct: 271 ISENTSIKDLNLSWNHFRRNGAVSLAKGVGANIFLKKIDLSWNGLGLEGASALGDALRNN 330

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
           ++L  L+++NN I   G   LA+ LL N T+R L +  N
Sbjct: 331 NVLEELDVSNNRISTEGAILLAKGLLSNETLRILRIGKN 369



 Score = 39.3 bits (90), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +   +++S  +F   G   LA+ +G N   +++  + NG+   G  A    L++N  L+ 
Sbjct: 276 SIKDLNLSWNHFRRNGAVSLAKGVGANIFLKKIDLSWNGLGLEGASALGDALRNNNVLEE 335

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN--SILRVLE 280
           L++S N I  EG   L   L+ N  +  L++    ++  G   I   L+ N  S++  L+
Sbjct: 336 LDVSNNRISTEGAILLAKGLLSNETLRILRIGKNPIQSAGGFGILTALRQNGGSVVETLD 395

Query: 281 LNNNMID 287
           L++ +++
Sbjct: 396 LSDVVVN 402


>gi|124430564|ref|NP_038716.2| T-complex-associated testis-expressed protein 1 [Mus musculus]
 gi|182701373|sp|A6H639.1|TCTE1_MOUSE RecName: Full=T-complex-associated testis-expressed protein 1;
           Short=Tcte-1
 gi|148691495|gb|EDL23442.1| t-complex-associated testis expressed 1 [Mus musculus]
 gi|148877765|gb|AAI45742.1| T-complex-associated testis expressed 1 [Mus musculus]
          Length = 498

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L  
Sbjct: 255 EWNLFLFTYRDCYSLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSH 314

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+++NL +N I
Sbjct: 315 NLIGDRGARAAAKLLS--HSRLRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCI 372

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + IA AL+ N+ ++ + LGGN +    A+ ++++L  N+ + SL+L+ N IG DG
Sbjct: 373 EDEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDG 432

Query: 460 AKALSE 465
            K L E
Sbjct: 433 GKQLLE 438



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 105/212 (49%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 270 AATIKACH-------TLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGA 322

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +A A+LL ++S LRVL L NN +   G  SLA AL  N+ +  L+L  N     G  A+A
Sbjct: 323 RAAAKLL-SHSRLRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIA 381

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             LE NK L  LHL GN +  E    L+S + +    L  L++  N I   G   + E I
Sbjct: 382 HALETNKCLSVLHLGGNKLS-EPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQLLEGI 440

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K++L  +L ++D+  E    I   L  NR
Sbjct: 441 SDNKTILEFDLRLSDVSQESEYLIGQVLHANR 472



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 2/209 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  ++   +L+   L  + + D+  R L+  L      L  LD+ +N I  +GA   A
Sbjct: 268 SLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDHPA-LEELDLSHNLIGDRGARAAA 326

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N  +  ++L  N I  +G  AIA  L+
Sbjct: 327 KLLSHSR-LRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHALE 385

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  ++ L L  N +    A  LS++L  +  + +L L    IG  G + + + +  N T
Sbjct: 386 TNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQLLEGISDNKT 445

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           I   DLR + +  E    + Q      EA
Sbjct: 446 ILEFDLRLSDVSQESEYLIGQVLHANREA 474



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    L  SL  +   EE+  + N I   G +A   +L S+  L+ LNL+ N +   G 
Sbjct: 291 DDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKLL-SHSRLRVLNLANNQLQAPGA 349

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +AIA  L+ N  L VL L  N +     T L+
Sbjct: 350 QSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLS 409

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ SL+L+ N+ G  G   L +G+  NK++ E  L  + +  E
Sbjct: 410 QMLTVNTTLVSLNLSCNHIGQDGGKQLLEGISDNKTILEFDLRLSDVSQE 459



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 34/190 (17%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+    L  + +    A  + R L D+
Sbjct: 247 VKDCGMNFEWNLFLFTYRD--CYSLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDH 304

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  LDL++N IG  GA+A +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 305 PALEELDLSHNLIGDRGARAAAKLLS-HSRLRVLNLANNQLQAPGAQSLAHALAHNTNLV 363

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L+LR                              N I D+G  AIA AL+ N+ ++V  
Sbjct: 364 FLNLR-----------------------------LNCIEDEGGQAIAHALETNKCLSV-- 392

Query: 563 LNLANNFLTK 572
           L+L  N L++
Sbjct: 393 LHLGGNKLSE 402



 Score = 39.3 bits (90), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 43/98 (43%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           DEG   +A +L  N+    +    N ++         +L  N  L +LNLS N IG +G 
Sbjct: 374 DEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGG 433

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           K L + + DN  +    L   D+  E    I ++L  N
Sbjct: 434 KQLLEGISDNKTILEFDLRLSDVSQESEYLIGQVLHAN 471


>gi|320165258|gb|EFW42157.1| hypothetical protein CAOG_07542 [Capsaspora owczarzaki ATCC 30864]
          Length = 1137

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 106/188 (56%), Gaps = 4/188 (2%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
           ++L  + I  +    +A+ALK N T+T +D+  N + + GA   A  LK N+ +T L L 
Sbjct: 22  LSLSWSSICKDNVRGVAEALKVNTTVTKLDMSWNYLENAGARRFAEGLKVNTAVTELILC 81

Query: 452 YNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
            N I   GA+A++  LK +  +  L L   +IG +G + +A+ L  N T+  L L +N +
Sbjct: 82  QNSIDGAGAEAIALALKVNTGVIQLDLSHNKIGDAGLQAIAEALLVNTTVRDLCLSSNQI 141

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            D GA+ +A++ KV N  LT + +  N+I D GA AIA+AL+ NE + V  + +    L 
Sbjct: 142 SDVGARAIAETLKV-NTTLTRLIMNDNQIGDIGALAIAEALQKNEALNVLEVLV---HLV 197

Query: 572 KFGQSALT 579
           KF  S++T
Sbjct: 198 KFDISSVT 205



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 1/180 (0%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L +  +SI       VAE +K   ++  +++  N + + GA + A+ LK N  +T + L 
Sbjct: 22  LSLSWSSICKDNVRGVAEALKVNTTVTKLDMSWNYLENAGARRFAEGLKVNTAVTELILC 81

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N+I   GA AIA  LK N+ +  LDL++N IG  G +A++E L  +  +  L L   QI
Sbjct: 82  QNSIDGAGAEAIALALKVNTGVIQLDLSHNKIGDAGLQAIAEALLVNTTVRDLCLSSNQI 141

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
              GA  +A+ L+ N T++ L +  N + D GA  +A++ +  NEAL  +++  + ++ D
Sbjct: 142 SDVGARAIAETLKVNTTLTRLIMNDNQIGDIGALAIAEALQ-KNEALNVLEVLVHLVKFD 200



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 76/145 (52%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + +DMS     + G    AE L  N    E+    N I  AG +A    L+ N  +  L+
Sbjct: 48  TKLDMSWNYLENAGARRFAEGLKVNTAVTELILCQNSIDGAGAEAIALALKVNTGVIQLD 107

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
           LS N IGD G++ + + L+ N  V  L LSS  + D GA+AIAE LK N+ L  L +N+N
Sbjct: 108 LSHNKIGDAGLQAIAEALLVNTTVRDLCLSSNQISDVGARAIAETLKVNTTLTRLIMNDN 167

Query: 285 MIDYSGFTSLAEALLENSTIRSLHL 309
            I   G  ++AEAL +N  +  L +
Sbjct: 168 QIGDIGALAIAEALQKNEALNVLEV 192



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 1/173 (0%)

Query: 194 EVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQL 253
           E+S + + I    ++     L+ N  +  L++S N + + G +   + L  N  V  L L
Sbjct: 21  ELSLSWSSICKDNVRGVAEALKVNTTVTKLDMSWNYLENAGARRFAEGLKVNTAVTELIL 80

Query: 254 SSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNY 313
               +   GA+AIA  LK N+ +  L+L++N I  +G  ++AEALL N+T+R L L+ N 
Sbjct: 81  CQNSIDGAGAEAIALALKVNTGVIQLDLSHNKIGDAGLQAIAEALLVNTTVRDLCLSSNQ 140

Query: 314 GGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI 366
              +GA A+A+ L+ N +L  L ++ N IGD G  A+   L   +  L VL++
Sbjct: 141 ISDVGARAIAETLKVNTTLTRLIMNDNQIGDIGALAIAEALQKNEA-LNVLEV 192



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 85/156 (54%)

Query: 182 LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
           +AE+L  N T  ++  + N +  AG + F   L+ N A+  L L  N I   G + +   
Sbjct: 37  VAEALKVNTTVTKLDMSWNYLENAGARRFAEGLKVNTAVTELILCQNSIDGAGAEAIALA 96

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           L  N GV +L LS   + D G +AIAE L  N+ +R L L++N I   G  ++AE L  N
Sbjct: 97  LKVNTGVIQLDLSHNKIGDAGLQAIAEALLVNTTVRDLCLSSNQISDVGARAIAETLKVN 156

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +T+  L +N N  G +GA A+A+ L+ N++L  L +
Sbjct: 157 TTLTRLIMNDNQIGDIGALAIAEALQKNEALNVLEV 192


>gi|402867129|ref|XP_003897720.1| PREDICTED: T-complex-associated testis-expressed protein 1 [Papio
           anubis]
          Length = 501

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 100/187 (53%), Gaps = 2/187 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L 
Sbjct: 256 FEWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 315

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N 
Sbjct: 316 HNLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNC 373

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG D
Sbjct: 374 IEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLD 433

Query: 459 GAKALSE 465
           G K L E
Sbjct: 434 GGKQLLE 440



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSHNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALHANR 474



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 2/211 (0%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R ++  L      L  LD+ +N I  +GA  
Sbjct: 268 CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSHNLIGDRGARG 326

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  
Sbjct: 327 AAKLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHA 385

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N
Sbjct: 386 LQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDN 445

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
            T+   DLR + +  E    + Q+     EA
Sbjct: 446 KTLLEFDLRLSDVAQESEYLIGQALHANREA 476



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 30/212 (14%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL++N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSHNLIGDRGARGAAKLLS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEGAKCLAQSFKV---------------------------VNEALTSIDL 535
            L+LR N + DEG + LA + +                            +N  LTSI+L
Sbjct: 366 SLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINL 425

Query: 536 AFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           + N I  DG   + + +  N+ +    L L++
Sbjct: 426 SCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 457



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    +  SL  +   EE+  +
Sbjct: 256 FEWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 315

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +    +L S+  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 316 HNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 435 GKQLLEGMSDNKTLLEFDLRLSDVAQE 461


>gi|28436364|gb|AAO18156.1| NALP5 [Homo sapiens]
 gi|119592827|gb|EAW72421.1| hCG1733021, isoform CRA_a [Homo sapiens]
          Length = 1200

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 179/416 (43%), Gaps = 33/416 (7%)

Query: 169  MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQ-SNIALKTLNLSG 227
            M  +   +E        LG +    ++   ++ +T   +K     L+     ++TL    
Sbjct: 760  MRDKTLIEEQWEDFCSMLGTHPHLRQLDLGSSILTERAMKTLCAKLRHPTCKIQTLMFRN 819

Query: 228  NPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
              I   GV+ L  I++ N  +  L L    L++E  +   E LK+   L    L +  +D
Sbjct: 820  AQI-TPGVQHLWRIVMANRNLRSLNLGGTHLKEEDVRMACEALKHPKCL----LESLRLD 874

Query: 288  YSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGI 347
              G T             + +L            +++ L  + SL+ L L GN + D+G+
Sbjct: 875  CCGLT------------HACYLK-----------ISQILTTSPSLKSLSLAGNKVTDQGV 911

Query: 348  RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
              L   L   +  L  L + +  I+A G   +A  + + +SL  + L  N +G+EG   +
Sbjct: 912  MPLSDALRVSQCALQKLILEDCGITATGCQSLASALVSNRSLTHLCLSNNSLGNEGVNLL 971

Query: 408  ADALK-QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEV 466
              +++  + ++  + L   ++ + G   +A  L  NS +T L L+ NP+  +G K L EV
Sbjct: 972  CRSMRLPHCSLQRLMLNQCHLDTAGCGFLALALMGNSWLTHLSLSMNPVEDNGVKLLCEV 1031

Query: 467  LKFHG-NINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            ++    ++  L+L  C + A+  E ++ ++  +  +  LDL  N L D G   L +  K 
Sbjct: 1032 MREPSCHLQDLELVKCHLTAACCESLSCVISRSRHLKSLDLTDNALGDGGVAALCEGLKQ 1091

Query: 526  VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             N  LT + L    +  D   A++ AL  N    +TSLNL  N  +  G   L  A
Sbjct: 1092 KNSVLTRLGLKACGLTSDCCEALSLALSCNRH--LTSLNLVQNNFSPKGMMKLCSA 1145



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 151/340 (44%), Gaps = 4/340 (1%)

Query: 200  NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDL 258
            N     G++    ++ +N  L++LNL G  + +E V+  C+ L      +E L+L    L
Sbjct: 819  NAQITPGVQHLWRIVMANRNLRSLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDCCGL 878

Query: 259  RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGAL 317
                   I+++L  +  L+ L L  N +   G   L++AL +    ++ L L      A 
Sbjct: 879  THACYLKISQILTTSPSLKSLSLAGNKVTDQGVMPLSDALRVSQCALQKLILEDCGITAT 938

Query: 318  GANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
            G  +LA  L  N+SL  L L  NS+G+EG+  L   +      L  L +    +   G  
Sbjct: 939  GCQSLASALVSNRSLTHLCLSNNSLGNEGVNLLCRSMRLPHCSLQRLMLNQCHLDTAGCG 998

Query: 378  HVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIA 436
             +A  +     L  ++L MN + D G + + + +++    +  ++L   ++ +    +++
Sbjct: 999  FLALALMGNSWLTHLSLSMNPVEDNGVKLLCEVMREPSCHLQDLELVKCHLTAACCESLS 1058

Query: 437  RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT-LKLGWCQIGASGAEFVADML 495
             V+  +  + SLDL  N +G  G  AL E LK   ++ T L L  C + +   E ++  L
Sbjct: 1059 CVISRSRHLKSLDLTDNALGDGGVAALCEGLKQKNSVLTRLGLKACGLTSDCCEALSLAL 1118

Query: 496  RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDL 535
              N  ++ L+L  N    +G   L  +F      L  I L
Sbjct: 1119 SCNRHLTSLNLVQNNFSPKGMMKLCSAFACPTSNLQIIGL 1158


>gi|326675327|ref|XP_002665106.2| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1-like [Danio rerio]
          Length = 936

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 114/219 (52%), Gaps = 5/219 (2%)

Query: 337 LHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYM 396
           +  N+I D G++ L    S    K+ V+    N ++  G   +AE +   K +  + LY 
Sbjct: 693 MDNNNINDYGVKQLRPSFS----KMTVVRFCVNQLTDSGIEVLAEELIRYKIVKVLGLYQ 748

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N I D GA+++A  +++   + T+ LG NNI S G   +A  +  +  I  + +  N IG
Sbjct: 749 NHITDVGAKQVAKIIEECPHLRTVKLGCNNITSVGGKYLASAIHKSKSIFDIGMWGNCIG 808

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            +GA+A +E LK H ++  L L    I + G   +A  L+ N ++ I+ L  N + D+ A
Sbjct: 809 DEGAEAFAEALKNHPSLTNLSLSANGITSHGGRSLAQTLKENTSLHIVWLIQNKISDDAA 868

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
             LA++F+  N +LT + L  NE   DGA  +++ LK N
Sbjct: 869 SDLAEAFR-SNSSLTHLMLIDNEFTIDGARQLSEGLKDN 906



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 119/232 (51%), Gaps = 5/232 (2%)

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           NNN+ DY G   L  +  + + +R      N     G   LA+ L   K ++ L L+ N 
Sbjct: 695 NNNINDY-GVKQLRPSFSKMTVVR---FCVNQLTDSGIEVLAEELIRYKIVKVLGLYQNH 750

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I D G +  ++ +      L  + +G N+I++ G  ++A  I   KS+  I ++ N IGD
Sbjct: 751 ITDVGAKQ-VAKIIEECPHLRTVKLGCNNITSVGGKYLASAIHKSKSIFDIGMWGNCIGD 809

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGAE  A+ALK + ++T + L  N I S G  ++A+ LK+N+ +  + L  N I  D A 
Sbjct: 810 EGAEAFAEALKNHPSLTNLSLSANGITSHGGRSLAQTLKENTSLHIVWLIQNKISDDAAS 869

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            L+E  + + ++  L L   +    GA  +++ L+ N T+  ++++ + + +
Sbjct: 870 DLAEAFRSNSSLTHLMLIDNEFTIDGARQLSEGLKDNTTLKEVNIKGSRISE 921



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 129/250 (51%), Gaps = 15/250 (6%)

Query: 349 ALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           AL   L  R+  L V D+ NN+I+  G   V +   +   +  +   +N + D G E +A
Sbjct: 677 ALNFVLHHRRKHLGV-DMDNNNINDYG---VKQLRPSFSKMTVVRFCVNQLTDSGIEVLA 732

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           + L + + +  + L  N+I   GA  +A+++++   + ++ L  N I + G K L+  + 
Sbjct: 733 EELIRYKIVKVLGLYQNHITDVGAKQVAKIIEECPHLRTVKLGCNNITSVGGKYLASAI- 791

Query: 469 FHGNINTLKLG-W--CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
            H + +   +G W  C IG  GAE  A+ L+ + +++ L L ANG+   G + LAQ+ K 
Sbjct: 792 -HKSKSIFDIGMWGNC-IGDEGAEAFAEALKNHPSLTNLSLSANGITSHGGRSLAQTLKE 849

Query: 526 VNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
            N +L  + L  N+I DD A  +A+A ++N   ++T L L +N  T  G   L++   L 
Sbjct: 850 -NTSLHIVWLIQNKISDDAASDLAEAFRSNS--SLTHLMLIDNEFTIDGARQLSEG--LK 904

Query: 586 YEMSEKEVNI 595
              + KEVNI
Sbjct: 905 DNTTLKEVNI 914



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 4/233 (1%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           V    N I   G+K    +  S   +  +    N + D G++ L + L+    V+ L L 
Sbjct: 691 VDMDNNNINDYGVKQ---LRPSFSKMTVVRFCVNQLTDSGIEVLAEELIRYKIVKVLGLY 747

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
              + D GAK +A++++    LR ++L  N I   G   LA A+ ++ +I  + + GN  
Sbjct: 748 QNHITDVGAKQVAKIIEECPHLRTVKLGCNNITSVGGKYLASAIHKSKSIFDIGMWGNCI 807

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  GA A A+ L+ + SL  L L  N I   G R+L   L      L ++ +  N IS  
Sbjct: 808 GDEGAEAFAEALKNHPSLTNLSLSANGITSHGGRSLAQTLKENTS-LHIVWLIQNKISDD 866

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            A  +AE  ++  SL  + L  N+   +GA ++++ LK N T+  +++ G+ I
Sbjct: 867 AASDLAEAFRSNSSLTHLMLIDNEFTIDGARQLSEGLKDNTTLKEVNIKGSRI 919



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 79/150 (52%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           V    N IT+ G K     +  + ++  + + GN IGDEG +   + L ++  +  L LS
Sbjct: 772 VKLGCNNITSVGGKYLASAIHKSKSIFDIGMWGNCIGDEGAEAFAEALKNHPSLTNLSLS 831

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +  +   G +++A+ LK N+ L ++ L  N I     + LAEA   NS++  L L  N  
Sbjct: 832 ANGITSHGGRSLAQTLKENTSLHIVWLIQNKISDDAASDLAEAFRSNSSLTHLMLIDNEF 891

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGD 344
              GA  L++GL+ N +L+E+++ G+ I +
Sbjct: 892 TIDGARQLSEGLKDNTTLKEVNIKGSRISE 921



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 5/206 (2%)

Query: 154 LNEF-AKELR-AFSS---VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           +N++  K+LR +FS    V        D G+  LAE L   +  + +    N IT  G K
Sbjct: 698 INDYGVKQLRPSFSKMTVVRFCVNQLTDSGIEVLAEELIRYKIVKVLGLYQNHITDVGAK 757

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
               +++    L+T+ L  N I   G K L   +  +  +  + +    + DEGA+A AE
Sbjct: 758 QVAKIIEECPHLRTVKLGCNNITSVGGKYLASAIHKSKSIFDIGMWGNCIGDEGAEAFAE 817

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
            LKN+  L  L L+ N I   G  SLA+ L EN+++  + L  N      A+ LA+    
Sbjct: 818 ALKNHPSLTNLSLSANGITSHGGRSLAQTLKENTSLHIVWLIQNKISDDAASDLAEAFRS 877

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGL 354
           N SL  L L  N    +G R L  GL
Sbjct: 878 NSSLTHLMLIDNEFTIDGARQLSEGL 903



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 89/220 (40%), Gaps = 41/220 (18%)

Query: 389 LLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSL 448
            LW+   +  I +  +E +A       +   I +   NI+S   SA+  VL        +
Sbjct: 635 FLWM---LRCIFETNSEDVAKMTANGISADYIKIAFCNIYSADCSALNFVLHHRRKHLGV 691

Query: 449 DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           D+  N I   G K L         +  ++    Q+  SG E +A+ L     + +L L  
Sbjct: 692 DMDNNNINDYGVKQLRPSF---SKMTVVRFCVNQLTDSGIEVLAEELIRYKIVKVLGLYQ 748

Query: 509 NGLRDEGAKCLAQSFKVVNEA--LTSIDLAFNEIR------------------------- 541
           N + D GAK +A   K++ E   L ++ L  N I                          
Sbjct: 749 NHITDVGAKQVA---KIIEECPHLRTVKLGCNNITSVGGKYLASAIHKSKSIFDIGMWGN 805

Query: 542 ---DDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
              D+GA A A+ALK +   ++T+L+L+ N +T  G  +L
Sbjct: 806 CIGDEGAEAFAEALKNHP--SLTNLSLSANGITSHGGRSL 843


>gi|290984863|ref|XP_002675146.1| LRR_RI domain-containing protein [Naegleria gruberi]
 gi|284088740|gb|EFC42402.1| LRR_RI domain-containing protein [Naegleria gruberi]
          Length = 458

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 170/329 (51%), Gaps = 46/329 (13%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           L  LN+  N IG+EGVKC  ++      +    + +  + DEGAK I+++    S L  +
Sbjct: 150 LTNLNVEDNKIGNEGVKCFSEL----KHLTNFNIRNNKIMDEGAKYISQM----SQLTCM 201

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            + NN I   G    AE + +   + +L+++GN  G  GA  +++ +EG   L  L +  
Sbjct: 202 NIGNNNIGEPG----AEYISQMKQLTNLNIHGNRIGDKGARHISE-MEG---LTHLDIGY 253

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N++G+ G + L     S+  KL  L I  N +   GA  V+E     K L  + +  N I
Sbjct: 254 NNLGNLGSQYL-----SQMKKLTYLFIEGNRLDENGAKFVSEL----KQLTILCIGANGI 304

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
           G  GA  I + +KQ   +T + +GG  I  +G    AR LK  + +T+L++ YN +G+ G
Sbjct: 305 GPNGARYITE-MKQ---LTDLSIGGAKIGEEG----ARHLKTMNQLTNLNIGYNRLGSIG 356

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           AK +SE+ +    + +L + +  I   GA+ ++++      +  LD+  N + DEGAK +
Sbjct: 357 AKFISEMKQ----LTSLDIFYNNIEDEGAKHISEL----KNLRKLDIGRNNITDEGAKYV 408

Query: 520 AQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
           +Q    +N+ LT + + +N + D+GA  I
Sbjct: 409 SQ----LNQ-LTHLSITYNNLSDEGAKYI 432



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 136/278 (48%), Gaps = 63/278 (22%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           K L   ++  N I DEG + +     S+  +L  ++IGNN+I   GA    EYI   K L
Sbjct: 172 KHLTNFNIRNNKIMDEGAKYI-----SQMSQLTCMNIGNNNIGEPGA----EYISQMKQL 222

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV----------- 438
             +N++ N IGD+GA  I++       +T +D+G NN+ + G+  ++++           
Sbjct: 223 TNLNIHGNRIGDKGARHISEM----EGLTHLDIGYNNLGNLGSQYLSQMKKLTYLFIEGN 278

Query: 439 -LKDNSV--------ITSLDLAYNPIGADGAKALSEV--------------------LKF 469
            L +N          +T L +  N IG +GA+ ++E+                    LK 
Sbjct: 279 RLDENGAKFVSELKQLTILCIGANGIGPNGARYITEMKQLTDLSIGGAKIGEEGARHLKT 338

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
              +  L +G+ ++G+ GA+F+++M +    ++ LD+  N + DEGAK +++      + 
Sbjct: 339 MNQLTNLNIGYNRLGSIGAKFISEMKQ----LTSLDIFYNNIEDEGAKHISEL-----KN 389

Query: 530 LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           L  +D+  N I D+GA  ++Q L     +++T  NL++
Sbjct: 390 LRKLDIGRNNITDEGAKYVSQ-LNQLTHLSITYNNLSD 426


>gi|156379331|ref|XP_001631411.1| predicted protein [Nematostella vectensis]
 gi|156218451|gb|EDO39348.1| predicted protein [Nematostella vectensis]
          Length = 276

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 131/251 (52%), Gaps = 1/251 (0%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           V  L + ++ +  EGA A+AE+L  NS +RVL+L+ N I   G  ++A+ L  N  I  L
Sbjct: 5   VTELVMRNLGIGPEGAAAVAEILAGNSSVRVLDLSVNGIQNKGAFAVAQLLEHNQWITDL 64

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           +++ N     G +++   L  N +L  L +  NS   + I  L + L +    L  LD+ 
Sbjct: 65  NISENNLSKSGLDSIGNMLILNNTLTCLDVSRNSFTCDDIHFLTNVLQTADA-LLFLDLR 123

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
           +N+   K   ++ E +K   SL  + +  N  GDEGA+ +   L++NR++  +D+  N I
Sbjct: 124 HNAFKEKAGLYLGEMVKKNTSLRELYIGWNHFGDEGAKHLCAGLQENRSLEILDICWNEI 183

Query: 428 HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
              GA  IA  +++N  +  L+L  N I   G ++++  L+ +  +  LK+G+  I +SG
Sbjct: 184 GRDGAGYIAEFIENNGRLVELNLDNNHITDHGLRSIARGLEVNETLRLLKVGFNLITSSG 243

Query: 488 AEFVADMLRYN 498
           A  + + L  N
Sbjct: 244 ACKILECLCLN 254



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 126/265 (47%), Gaps = 30/265 (11%)

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
           + + EL +    IG EG  A+   L+     + VLD+  N I  KGAF VA+ +++ + +
Sbjct: 3   RYVTELVMRNLGIGPEGAAAVAEILAGNS-SVRVLDLSVNGIQNKGAFAVAQLLEHNQWI 61

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN-----NIH---------------- 428
             +N+  N++   G + I + L  N T+T +D+  N     +IH                
Sbjct: 62  TDLNISENNLSKSGLDSIGNMLILNNTLTCLDVSRNSFTCDDIHFLTNVLQTADALLFLD 121

Query: 429 -------SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
                   K    +  ++K N+ +  L + +N  G +GAK L   L+ + ++  L + W 
Sbjct: 122 LRHNAFKEKAGLYLGEMVKKNTSLRELYIGWNHFGDEGAKHLCAGLQENRSLEILDICWN 181

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           +IG  GA ++A+ +  N  +  L+L  N + D G + +A+  + VNE L  + + FN I 
Sbjct: 182 EIGRDGAGYIAEFIENNGRLVELNLDNNHITDHGLRSIARGLE-VNETLRLLKVGFNLIT 240

Query: 542 DDGAFAIAQALKANEDVAVTSLNLA 566
             GA  I + L  N   A+ +L+LA
Sbjct: 241 SSGACKILECLCLNPHSALETLHLA 265



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 31/292 (10%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R  + + M     G EG   +AE L  N +   +  + NGI   G  A   +L+ N  + 
Sbjct: 3   RYVTELVMRNLGIGPEGAAAVAEILAGNSSVRVLDLSVNGIQNKGAFAVAQLLEHNQWIT 62

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LN+S N +   G+  + ++L+ N  +  L +S      +    +  +L+    L  L+L
Sbjct: 63  DLNISENNLSKSGLDSIGNMLILNNTLTCLDVSRNSFTCDDIHFLTNVLQTADALLFLDL 122

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
            +N         L E + +N+++R L++  N+ G  GA  L  GL+ N+SL         
Sbjct: 123 RHNAFKEKAGLYLGEMVKKNTSLRELYIGWNHFGDEGAKHLCAGLQENRSLE-------- 174

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
                                +LDI  N I   GA ++AE+I+N   L+ +NL  N I D
Sbjct: 175 ---------------------ILDICWNEIGRDGAGYIAEFIENNGRLVELNLDNNHITD 213

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLDLA 451
            G   IA  L+ N T+  + +G N I S GA  I   L  N  S + +L LA
Sbjct: 214 HGLRSIARGLEVNETLRLLKVGFNLITSSGACKILECLCLNPHSALETLHLA 265



 Score = 45.8 bits (107), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 30/158 (18%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K+  +   + +   +FGDEG   L                      AG       
Sbjct: 135 LGEMVKKNTSLRELYIGWNHFGDEGAKHL---------------------CAG------- 166

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           LQ N +L+ L++  N IG +G   + + + +N  +  L L +  + D G ++IA  L+ N
Sbjct: 167 LQENRSLEILDICWNEIGRDGAGYIAEFIENNGRLVELNLDNNHITDHGLRSIARGLEVN 226

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLEN--STIRSLHL 309
             LR+L++  N+I  SG   + E L  N  S + +LHL
Sbjct: 227 ETLRLLKVGFNLITSSGACKILECLCLNPHSALETLHL 264


>gi|297678242|ref|XP_002816992.1| PREDICTED: LOW QUALITY PROTEIN: T-complex-associated
           testis-expressed protein 1 [Pongo abelii]
          Length = 556

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 2/185 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L 
Sbjct: 256 FEWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 315

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G R     LS    +L VL++ NN + A GA  +A  + +  +L+ +NL +N 
Sbjct: 316 QNLIGDRGARGAAKLLS--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNC 373

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG D
Sbjct: 374 IEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLD 433

Query: 459 GAKAL 463
           G K L
Sbjct: 434 GGKQL 438



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL ++S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   +   +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLXGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I   L  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQVLYANR 474



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 7/231 (3%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R ++  L      L  LD+  N I  +GA  
Sbjct: 268 CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSQNLIGDRGARG 326

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  
Sbjct: 327 AAKLLSHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHA 385

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + +   +  N
Sbjct: 386 LQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLXGMSDN 445

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNE-----ALTSIDLAFNEIRDDG 544
            T+   DLR + +  E    + Q      E     AL+ +  +FNE    G
Sbjct: 446 KTLLEFDLRLSDVAQESEYLIGQVLYANREAARQRALSLVLASFNECHPGG 496



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 2/189 (1%)

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
           +A  IK C +L    L  + + D+ A  I  +L  +  +  +DL  N I  +GA   A++
Sbjct: 271 LAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKL 330

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L  +S +  L+LA N + A GA++L+  L  + N+ +L L    I   G + +A  L+ N
Sbjct: 331 LS-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTN 389

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
             ++ L L  N L +  A  L+Q    +N  LTSI+L+ N I  DG   +   +  N+ +
Sbjct: 390 KCLTTLHLGGNELSEPTATLLSQVL-AINTTLTSINLSCNHIGLDGGKQLLXGMSDNKTL 448

Query: 559 AVTSLNLAN 567
               L L++
Sbjct: 449 LEFDLRLSD 457



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    +  SL  +   EE+  +
Sbjct: 256 FEWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 315

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +    +L S+  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 316 QNLIGDRGARGAAKLL-SHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L  G+  NK+L E  L  + +  E
Sbjct: 435 GKQLLXGMSDNKTLLEFDLRLSDVAQE 461


>gi|290974552|ref|XP_002670009.1| predicted protein [Naegleria gruberi]
 gi|284083563|gb|EFC37265.1| predicted protein [Naegleria gruberi]
          Length = 445

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 168/353 (47%), Gaps = 59/353 (16%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           L+  + +D+ G N  +EG  +++E     Q    ++   N I   G+K   G+ Q    L
Sbjct: 62  LKQLTQLDIDGNNIDEEGAKYISEM----QYLAILNMLGNNIGNEGVKYISGMKQ----L 113

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
             LN+S N IG +GVK     +V+   +  L +    + DEGAK I E+       ++L+
Sbjct: 114 THLNVSENNIGLDGVKY----IVEMKQLTHLNIGQNSIGDEGAKLIGEM------TQLLD 163

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           L    I Y G +S  E +   S +  L  + N    +  +   K + G   L  L +H N
Sbjct: 164 L---CIFYCGISS--EGIKHISKLDKLT-DLNISSNMLYDDSTKYISGMNQLTYLRIHDN 217

Query: 341 SIGDEGIRAL-----MSGLSSRKG--------------KLAVLDIGNNSISAKGAFHVAE 381
           +IGDEG + L     ++G++  +               KL  +DI +N+I   G    A+
Sbjct: 218 NIGDEGAKFLGKMKQLTGINIWRNELTAEGVKFLTGLDKLTEIDISSNNIGDNG----AK 273

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           YI   K L  +++  N+IG+EGA+ I +     + +T + L  NNI  +GA  I+++ K 
Sbjct: 274 YISEMKQLTNLDVSDNNIGEEGAKYIGNM----KQLTILTLWKNNIRGEGAKYISKLEK- 328

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
              +T LD++ N I   GAK +SE+      +N L +    IG  GA+++ +M
Sbjct: 329 ---LTELDISENHIDEKGAKYISEM----SQLNALDISVNIIGNQGAKYIKEM 374



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 131/269 (48%), Gaps = 52/269 (19%)

Query: 327 EGNKSLRE------LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           EG K + E      L++ GN+IG+EG++ + SG+     +L  L++  N+I   G     
Sbjct: 78  EGAKYISEMQYLAILNMLGNNIGNEGVKYI-SGMK----QLTHLNVSENNIGLDGV---- 128

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           +YI   K L  +N+  N IGDEGA+ I + + Q   +     G   I S+G   I+++ K
Sbjct: 129 KYIVEMKQLTHLNIGQNSIGDEGAKLIGE-MTQLLDLCIFYCG---ISSEGIKHISKLDK 184

Query: 441 DNSVITSLDLAYNPIGADGAKALS-----EVLKFHGNINTLKLGWCQIGASGAEFVADML 495
               +T L+++ N +  D  K +S       L+ H N          IG  GA+F+  M 
Sbjct: 185 ----LTDLNISSNMLYDDSTKYISGMNQLTYLRIHDN---------NIGDEGAKFLGKMK 231

Query: 496 RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           +    ++ +++  N L  EG K L    K     LT ID++ N I D+GA  I++  +  
Sbjct: 232 Q----LTGINIWRNELTAEGVKFLTGLDK-----LTEIDISSNNIGDNGAKYISEMKQ-- 280

Query: 556 EDVAVTSLNLANNFLTKFGQSALTDAKDL 584
               +T+L++++N + + G   + + K L
Sbjct: 281 ----LTNLDVSDNNIGEEGAKYIGNMKQL 305



 Score = 42.4 bits (98), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 84/173 (48%), Gaps = 25/173 (14%)

Query: 415 RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNI 473
           + +T +D+ GNNI  +GA  I+ +      +  L++  N IG +G K +S + +  H N+
Sbjct: 63  KQLTQLDIDGNNIDEEGAKYISEM----QYLAILNMLGNNIGNEGVKYISGMKQLTHLNV 118

Query: 474 NTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
           +        IG  G +++ +M +    ++ L++  N + DEGAK + +  ++++     +
Sbjct: 119 SE-----NNIGLDGVKYIVEMKQ----LTHLNIGQNSIGDEGAKLIGEMTQLLD-----L 164

Query: 534 DLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 586
            + +  I  +G   I++  K      +T LN+++N L       ++    L Y
Sbjct: 165 CIFYCGISSEGIKHISKLDK------LTDLNISSNMLYDDSTKYISGMNQLTY 211



 Score = 42.0 bits (97), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 95/238 (39%), Gaps = 63/238 (26%)

Query: 161 LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           +   + + +   N GDEG    A+ LG  +    ++   N +TA G+K   G+ +    L
Sbjct: 206 MNQLTYLRIHDNNIGDEG----AKFLGKMKQLTGINIWRNELTAEGVKFLTGLDK----L 257

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD-----EGAKAIAELLKNNSI 275
             +++S N IGD G K +          E  QL+++D+ D     EGAK I  + +    
Sbjct: 258 TEIDISSNNIGDNGAKYIS---------EMKQLTNLDVSDNNIGEEGAKYIGNMKQ---- 304

Query: 276 LRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           L +L L  N I   G                                AK +   + L EL
Sbjct: 305 LTILTLWKNNIRGEG--------------------------------AKYISKLEKLTEL 332

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            +  N I ++G + +     S   +L  LDI  N I  +GA ++ E  +    L+W N
Sbjct: 333 DISENHIDEKGAKYI-----SEMSQLNALDISVNIIGNQGAKYIKEMKQLTDLLIWDN 385


>gi|290998898|ref|XP_002682017.1| predicted protein [Naegleria gruberi]
 gi|284095643|gb|EFC49273.1| predicted protein [Naegleria gruberi]
          Length = 408

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 170/325 (52%), Gaps = 54/325 (16%)

Query: 249 ERLQLSSVDLRD-----EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENST 303
           E  QL+S+++ D     EGAK I+E+ +    L  L+++ N I   G    A+ + E   
Sbjct: 129 EMKQLTSLNISDNQIGLEGAKYISEMTQ----LTSLDISVNRIGVEG----AKFISEMKQ 180

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           + SL ++ N  G  G   +++     K L  L +  N IG EG + +     S   +L  
Sbjct: 181 LTSLDISVNRIGVEGVKFISEM----KQLTSLDISDNQIGLEGSKYI-----SEMTQLTS 231

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LDI  N I  +GA    ++I   K L  +N+ +N IG EG + I++ +KQ   +T++D+ 
Sbjct: 232 LDISVNRIGVEGA----KFISEMKQLTSLNISVNRIGVEGVKFISE-MKQ---LTSLDIS 283

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I   GA  I+ + +    +TSLD++ N IG +GAK +SE+      + +L +   QI
Sbjct: 284 DNQI-GLGAKYISEMTQ----LTSLDISVNRIGDEGAKFISEM----KQLTSLDICDNQI 334

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G  GA+F+++M +  + +    + +N +  EGAK +++      + LTS+D++ N I D+
Sbjct: 335 GVEGAKFISEMTQLTSLV----ITSNRIGVEGAKFISEM-----KQLTSLDISGNRIGDE 385

Query: 544 GAFAIAQALKANEDVAVTSLNLANN 568
           G   I++  +      +TSLN++ N
Sbjct: 386 GVKFISEMKQ------LTSLNISVN 404



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 150/295 (50%), Gaps = 54/295 (18%)

Query: 220 LKTLNLSGNPIGDEGVKCLC--------DILVDNAGV-------ERLQLSSVDLR----- 259
           L +LN+S N IG EG K +         DI V+  GV       E  QL+S+D+      
Sbjct: 133 LTSLNISDNQIGLEGAKYISEMTQLTSLDISVNRIGVEGAKFISEMKQLTSLDISVNRIG 192

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
            EG K I+E+ +    L  L++++N I   G   ++E     + + SL ++ N  G  GA
Sbjct: 193 VEGVKFISEMKQ----LTSLDISDNQIGLEGSKYISEM----TQLTSLDISVNRIGVEGA 244

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
             +++     K L  L++  N IG EG++ +     S   +L  LDI +N I        
Sbjct: 245 KFISEM----KQLTSLNISVNRIGVEGVKFI-----SEMKQLTSLDISDNQIGLG----- 290

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           A+YI     L  +++ +N IGDEGA+ I++ +KQ   +T++D+  N I  +GA  I+ + 
Sbjct: 291 AKYISEMTQLTSLDISVNRIGDEGAKFISE-MKQ---LTSLDICDNQIGVEGAKFISEMT 346

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +    +TSL +  N IG +GAK +SE+      + +L +   +IG  G +F+++M
Sbjct: 347 Q----LTSLVITSNRIGVEGAKFISEM----KQLTSLDISGNRIGDEGVKFISEM 393



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 108/197 (54%), Gaps = 30/197 (15%)

Query: 395 YMNDIGD-EGAEKIADALKQNRTI------TTIDLGGNNIHSKGASAIARVLKDNSVITS 447
           +MN I + + + ++ D+L+Q + I      T++++  N I  +GA  I+ + +    +TS
Sbjct: 104 FMNSIVNLKVSRRLLDSLEQPKFISEMKQLTSLNISDNQIGLEGAKYISEMTQ----LTS 159

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           LD++ N IG +GAK +SE+      + +L +   +IG  G +F+++M      ++ LD+ 
Sbjct: 160 LDISVNRIGVEGAKFISEM----KQLTSLDISVNRIGVEGVKFISEM----KQLTSLDIS 211

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
            N +  EG+K +++  +     LTS+D++ N I  +GA  I++  +      +TSLN++ 
Sbjct: 212 DNQIGLEGSKYISEMTQ-----LTSLDISVNRIGVEGAKFISEMKQ------LTSLNISV 260

Query: 568 NFLTKFGQSALTDAKDL 584
           N +   G   +++ K L
Sbjct: 261 NRIGVEGVKFISEMKQL 277



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 60/255 (23%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAE-------SLGYNQTAEE-------------V 195
           +F  E++  +S+D+S    G EG+ F++E        +  NQ   E             +
Sbjct: 173 KFISEMKQLTSLDISVNRIGVEGVKFISEMKQLTSLDISDNQIGLEGSKYISEMTQLTSL 232

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLC--------DILVDNAG 247
             + N I   G K    + Q    L +LN+S N IG EGVK +         DI  +  G
Sbjct: 233 DISVNRIGVEGAKFISEMKQ----LTSLNISVNRIGVEGVKFISEMKQLTSLDISDNQIG 288

Query: 248 V------ERLQLSSVDLR-----DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
           +      E  QL+S+D+      DEGAK I+E+ +    L  L++ +N I   G    A+
Sbjct: 289 LGAKYISEMTQLTSLDISVNRIGDEGAKFISEMKQ----LTSLDICDNQIGVEG----AK 340

Query: 297 ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
            + E + + SL +  N  G  GA  +++     K L  L + GN IGDEG++ +     S
Sbjct: 341 FISEMTQLTSLVITSNRIGVEGAKFISEM----KQLTSLDISGNRIGDEGVKFI-----S 391

Query: 357 RKGKLAVLDIGNNSI 371
              +L  L+I  N I
Sbjct: 392 EMKQLTSLNISVNRI 406


>gi|291400148|ref|XP_002716357.1| PREDICTED: leucine rich repeat containing 34 [Oryctolagus
           cuniculus]
          Length = 420

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 27/233 (11%)

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           ++S L      ++ LD+  N +S  GA++ A+ ++    L+++NL  NDIG +G E IA 
Sbjct: 102 ILSKLLKNHPCISGLDVRYNLLSDVGAYYAAKLLQKQLYLIYLNLMFNDIGPDGGELIAK 161

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIA---------------------------RVLKDN 442
           AL++N T+  + + GN I +KG    A                            +LK+N
Sbjct: 162 ALRKNTTLKYLRMTGNKIENKGGMFFATMLQINSSLEKLDLGDCDLEESTIHLSHMLKEN 221

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  L L  + I   G + L + L  + ++  L +   +I   G  ++AD+L+ N T+ 
Sbjct: 222 HFLVELHLCKHDIKNSGLQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKCNTTLE 281

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           ++DL  N + + GA  L+++    N +L ++ +  N I  +G  A+++++K N
Sbjct: 282 VIDLSFNRIENAGANYLSETLTSYNRSLKALSVVSNNIEGEGLVALSKSMKTN 334



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 125/269 (46%), Gaps = 3/269 (1%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +T         +L+++  +  L++  N + D G      +L     +  L L   D+  +
Sbjct: 95  VTGEDFWILSKLLKNHPCISGLDVRYNLLSDVGAYYAAKLLQKQLYLIYLNLMFNDIGPD 154

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           G + IA+ L+ N+ L+ L +  N I+  G    A  L  NS++  L L G+         
Sbjct: 155 GGELIAKALRKNTTLKYLRMTGNKIENKGGMFFATMLQINSSLEKLDL-GDCDLEESTIH 213

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           L+  L+ N  L ELHL  + I + G++ L   L      L  LD+  N I+  G  ++A+
Sbjct: 214 LSHMLKENHFLVELHLCKHDIKNSGLQQLCDALY-LNSSLRYLDVSCNKITHDGMVYLAD 272

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLK 440
            +K   +L  I+L  N I + GA  +++ L   NR++  + +  NNI  +G  A+++ +K
Sbjct: 273 VLKCNTTLEVIDLSFNRIENAGANYLSETLTSYNRSLKALSVVSNNIEGEGLVALSKSMK 332

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKF 469
            N   +++ +  N        A S+++K 
Sbjct: 333 TNPTFSNIYIWGNKFDEATCVAYSDLIKM 361



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 1/264 (0%)

Query: 149 ESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIK 208
           E    L++  K     S +D+      D G ++ A+ L        ++   N I   G +
Sbjct: 98  EDFWILSKLLKNHPCISGLDVRYNLLSDVGAYYAAKLLQKQLYLIYLNLMFNDIGPDGGE 157

Query: 209 AFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAE 268
                L+ N  LK L ++GN I ++G      +L  N+ +E+L L   DL +E    ++ 
Sbjct: 158 LIAKALRKNTTLKYLRMTGNKIENKGGMFFATMLQINSSLEKLDLGDCDL-EESTIHLSH 216

Query: 269 LLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEG 328
           +LK N  L  L L  + I  SG   L +AL  NS++R L ++ N     G   LA  L+ 
Sbjct: 217 MLKENHFLVELHLCKHDIKNSGLQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKC 276

Query: 329 NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKS 388
           N +L  + L  N I + G   L   L+S    L  L + +N+I  +G   +++ +K   +
Sbjct: 277 NTTLEVIDLSFNRIENAGANYLSETLTSYNRSLKALSVVSNNIEGEGLVALSKSMKTNPT 336

Query: 389 LLWINLYMNDIGDEGAEKIADALK 412
              I ++ N   +      +D +K
Sbjct: 337 FSNIYIWGNKFDEATCVAYSDLIK 360



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 4/264 (1%)

Query: 291 FTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
           F  L++ L  +  I  L +  N    +GA   AK L+    L  L+L  N IG +G   +
Sbjct: 100 FWILSKLLKNHPCISGLDVRYNLLSDVGAYYAAKLLQKQLYLIYLNLMFNDIGPDGGELI 159

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              L  +   L  L +  N I  KG    A  ++   SL  ++L   D+ +E    ++  
Sbjct: 160 AKAL-RKNTTLKYLRMTGNKIENKGGMFFATMLQINSSLEKLDLGDCDL-EESTIHLSHM 217

Query: 411 LKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH 470
           LK+N  +  + L  ++I + G   +   L  NS +  LD++ N I  DG   L++VLK +
Sbjct: 218 LKENHFLVELHLCKHDIKNSGLQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKCN 277

Query: 471 GNINTLKLGWCQIGASGAEFVADML-RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
             +  + L + +I  +GA ++++ L  YN ++  L + +N +  EG   L++S K  N  
Sbjct: 278 TTLEVIDLSFNRIENAGANYLSETLTSYNRSLKALSVVSNNIEGEGLVALSKSMK-TNPT 336

Query: 530 LTSIDLAFNEIRDDGAFAIAQALK 553
            ++I +  N+  +    A +  +K
Sbjct: 337 FSNIYIWGNKFDEATCVAYSDLIK 360


>gi|290989301|ref|XP_002677276.1| predicted protein [Naegleria gruberi]
 gi|284090883|gb|EFC44532.1| predicted protein [Naegleria gruberi]
          Length = 881

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 153/330 (46%), Gaps = 33/330 (10%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           + D+ V C+   L  N  +  L LS  +L +E +  + ++LK N++L+     NN +   
Sbjct: 94  LTDKDVICIATALTTNKHILELDLSDNNLTEEISSYLGDMLKRNTVLQKFTCGNNKLGDQ 153

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G + + + +                   G+N  +        +  + L GN I      A
Sbjct: 154 GISYIYQCI-------------------GSNPFS-------LVNYIDLRGNRISSAA--A 185

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
            +S + +   ++ +L++ NN I  +GA  +A  + N  SL  +NL  N IGD+GA  IA 
Sbjct: 186 YLSSVFA-SNRIQILNLQNNLIDEEGAKVIAFELMNNTSLKVLNLQHNKIGDKGASHIAK 244

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L  N T+  +DLG N I  +GAS++   LK N  +  L+L  N +G  GA   S+ L  
Sbjct: 245 MLASNITLQELDLGSNRISVEGASSLVTGLKSNKSLLKLNLRSNIMGDPGAYMFSKCLTQ 304

Query: 470 HGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
           + N +  L LG+      GA  +++ML+ NN +   D++   L     K ++ S K  + 
Sbjct: 305 NSNFLEELYLGFNGFTIDGAVALSNMLKTNNRLKKFDIQGIMLDLTSMKIISDSLKENHS 364

Query: 529 ALT---SIDLAFNEIRDDGAFAIAQALKAN 555
            L     ID    ++    A  I++AL++N
Sbjct: 365 LLKLYLDIDSDSTKLAPQVAKTISEALQSN 394



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 162/362 (44%), Gaps = 50/362 (13%)

Query: 157 FAKELRAFSSVDMSGRN--FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
           FA   +   S  +S R     D+ +  +A +L  N+   E+  + N +T         +L
Sbjct: 75  FALNDKNIKSCILSNRKKMLTDKDVICIATALTTNKHILELDLSDNNLTEEISSYLGDML 134

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR----DEGAKAIAELL 270
           + N  L+      N +GD+G+  +   +  N       ++ +DLR       A  ++ + 
Sbjct: 135 KRNTVLQKFTCGNNKLGDQGISYIYQCIGSNPFS---LVNYIDLRGNRISSAAAYLSSVF 191

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNK 330
            +N I ++L L NN+ID  G   +A  L+ N++++ L+L  N  G  GA+ +AK L  N 
Sbjct: 192 ASNRI-QILNLQNNLIDEEGAKVIAFELMNNTSLKVLNLQHNKIGDKGASHIAKMLASNI 250

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +L+EL L  N I  EG  +L++GL S                              KSLL
Sbjct: 251 TLQELDLGSNRISVEGASSLVTGLKSN-----------------------------KSLL 281

Query: 391 WINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITS-- 447
            +NL  N +GD GA   +  L QN   +  + LG N     GA A++ +LK N+ +    
Sbjct: 282 KLNLRSNIMGDPGAYMFSKCLTQNSNFLEELYLGFNGFTIDGAVALSNMLKTNNRLKKFD 341

Query: 448 -----LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
                LDL    I +D  K    +LK + +I++      ++    A+ +++ L+ NNT+ 
Sbjct: 342 IQGIMLDLTSMKIISDSLKENHSLLKLYLDIDS---DSTKLAPQVAKTISEALQSNNTLQ 398

Query: 503 IL 504
            L
Sbjct: 399 DL 400



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 129/259 (49%), Gaps = 10/259 (3%)

Query: 174 FGDEGLFFLAESLGYNQTA--EEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIG 231
            GD+G+ ++ + +G N  +    +    N I++A       V  SN  ++ LNL  N I 
Sbjct: 150 LGDQGISYIYQCIGSNPFSLVNYIDLRGNRISSAAA-YLSSVFASN-RIQILNLQNNLID 207

Query: 232 DEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
           +EG K +   L++N  ++ L L    + D+GA  IA++L +N  L+ L+L +N I   G 
Sbjct: 208 EEGAKVIAFELMNNTSLKVLNLQHNKIGDKGASHIAKMLASNITLQELDLGSNRISVEGA 267

Query: 292 TSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS-LRELHLHGNSIGDEGIRAL 350
           +SL   L  N ++  L+L  N  G  GA   +K L  N + L EL+L  N    +G  AL
Sbjct: 268 SSLVTGLKSNKSLLKLNLRSNIMGDPGAYMFSKCLTQNSNFLEELYLGFNGFTIDGAVAL 327

Query: 351 MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND----IGDEGAEK 406
            + L +   +L   DI    +       +++ +K   SLL + L ++     +  + A+ 
Sbjct: 328 SNMLKTN-NRLKKFDIQGIMLDLTSMKIISDSLKENHSLLKLYLDIDSDSTKLAPQVAKT 386

Query: 407 IADALKQNRTITTIDLGGN 425
           I++AL+ N T+  + +GG+
Sbjct: 387 ISEALQSNNTLQDLIIGGD 405



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 10/242 (4%)

Query: 333 RELHL-HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
           RE+++ H + IG +     +  L+ +  K  +L      ++ K    +A  +   K +L 
Sbjct: 55  REIYMNHCSKIGIDPTFEFIFALNDKNIKSCILSNRKKMLTDKDVICIATALTTNKHILE 114

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN--SVITSLD 449
           ++L  N++ +E +  + D LK+N  +     G N +  +G S I + +  N  S++  +D
Sbjct: 115 LDLSDNNLTEEISSYLGDMLKRNTVLQKFTCGNNKLGDQGISYIYQCIGSNPFSLVNYID 174

Query: 450 LAYNPIGADGAKALSEVLKFHGN-INTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
           L  N I +  A  LS V  F  N I  L L    I   GA+ +A  L  N ++ +L+L+ 
Sbjct: 175 LRGNRISS-AAAYLSSV--FASNRIQILNLQNNLIDEEGAKVIAFELMNNTSLKVLNLQH 231

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           N + D+GA  +A+     N  L  +DL  N I  +GA ++   LK+N+  ++  LNL +N
Sbjct: 232 NKIGDKGASHIAKML-ASNITLQELDLGSNRISVEGASSLVTGLKSNK--SLLKLNLRSN 288

Query: 569 FL 570
            +
Sbjct: 289 IM 290


>gi|326678374|ref|XP_001346157.4| PREDICTED: ribonuclease inhibitor-like [Danio rerio]
          Length = 850

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 208/442 (47%), Gaps = 22/442 (4%)

Query: 164 FSSVDMSGRNFGD-EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
            + +D+S    GD +G    A  +  +   E++      +T          L S   LK 
Sbjct: 404 LTELDLSEDKLGDLDGEKLSALLMDSHSKVEKIKLNNCELTEKSCSVLATCLSSKTILKE 463

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL-KNNSILRVLEL 281
           LNL+ + + D GV+ +C+ L +     ++        +EG + +  ++ KN  +L+ L L
Sbjct: 464 LNLNNSRLLDSGVRGICEGLKNPVCKLKILKLLCPAAEEGCQFVTGVVGKNPLLLKELNL 523

Query: 282 NNNMIDYSGFTSLAEALLEN--STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           +++ +  +G   L+ ALL++   TI++L L+         +AL   L  + SL+EL +  
Sbjct: 524 SDHELGVTGVNQLS-ALLQDKHCTIKTLMLHNCGLTEESCSALTTILRSDSSLKELDMSN 582

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-NCKSLLWINLYMND 398
           N++ D G++ L SGL +    L  L + + SIS +G   +A  ++ N   L+ ++L  ND
Sbjct: 583 NNLQDSGVKKLQSGLEN--STLEKLGLSDCSISEEGYKALASALRSNPSHLIELDLRGND 640

Query: 399 IGDEGAEKIADALKQN----RTITTIDLGGNNIHSKGASAIARVLKDNSV-ITSLDLAYN 453
            G  G +++ D L+      +T+  +    + +       + R+   N + +  L L+ +
Sbjct: 641 PGQSGVKELTDLLQDPHCTLKTVRFLSPAADEV----CQYVTRIEGKNPLFLKELTLSLH 696

Query: 454 PIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNT-ISILDLRANGL 511
            +G      L+++L+  H  I+TL L  C+I       +   L+ N + +  L+L  N +
Sbjct: 697 ELGDTRVNQLTDLLQDKHCQISTLTLWNCKITEEQCVILTSALKSNPSHLRELELSGNEI 756

Query: 512 RDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
           ++ G   L +  K  +  L  + L+  E+ D+   A+A ALK+N    +  L+L+ N L 
Sbjct: 757 KNTGVSHLCELLKDSHCKLEKLRLSCCEMTDEACSAVASALKSNPS-HLRELDLSGNKLE 815

Query: 572 KFGQSALTDAKDLVYEMSEKEV 593
             G   L+D   L+Y   + E+
Sbjct: 816 NSGVKNLSDL--LMYPQCKLEI 835



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 184/441 (41%), Gaps = 73/441 (16%)

Query: 212 GVLQSN-IALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAEL 269
           GV+  N + LK LNLS   +G++ +  L  +L D +  +  LQL    L +E   A+A +
Sbjct: 223 GVVGKNPLLLKELNLSDRQLGNKEMVQLAALLQDKHCKLIILQLRGCGLTEESCSALATV 282

Query: 270 LKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEG 328
           LK+NS L+ L+L+NN +  SG   L   L   N T+  L    N+   +       G+ G
Sbjct: 283 LKSNSSLKELDLSNNNLQDSGVKKLQSGLENTNCTLEKLRFLSNFADEVC--QFVTGVVG 340

Query: 329 --NKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK-N 385
                L+EL+L  + +GD  +  L + L  +  ++  L    +  + +   +++E +  N
Sbjct: 341 KNLLLLKELNLSDHELGDTRVNQLSALLQDKHCQIHTLMFLKSPAAQESCDYLSEVLGIN 400

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSV 444
              L  ++L  + +GD   EK++  L  + + +  I L    +  K  S +A  L   ++
Sbjct: 401 PLLLTELDLSEDKLGDLDGEKLSALLMDSHSKVEKIKLNNCELTEKSCSVLATCLSSKTI 460

Query: 445 ITSLDL----------------AYNPI--------------------------------- 455
           +  L+L                  NP+                                 
Sbjct: 461 LKELNLNNSRLLDSGVRGICEGLKNPVCKLKILKLLCPAAEEGCQFVTGVVGKNPLLLKE 520

Query: 456 --------GADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDL 506
                   G  G   LS +L+  H  I TL L  C +       +  +LR ++++  LD+
Sbjct: 521 LNLSDHELGVTGVNQLSALLQDKHCTIKTLMLHNCGLTEESCSALTTILRSDSSLKELDM 580

Query: 507 RANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLA 566
             N L+D G K L    +  N  L  + L+   I ++G  A+A AL++N    +  L+L 
Sbjct: 581 SNNNLQDSGVKKLQSGLE--NSTLEKLGLSDCSISEEGYKALASALRSNPS-HLIELDLR 637

Query: 567 NNFLTKFGQSALTDAKDLVYE 587
            N     GQS + +  DL+ +
Sbjct: 638 GN---DPGQSGVKELTDLLQD 655



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 124/305 (40%), Gaps = 46/305 (15%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  ES   L    +   +   +DMS  N  D G+  L   L  N T E++  +   I+  
Sbjct: 557 LTEESCSALTTILRSDSSLKELDMSNNNLQDSGVKKLQSGL-ENSTLEKLGLSDCSISEE 615

Query: 206 GIKAFDGVLQSNIA-LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           G KA    L+SN + L  L+L GN  G  GVK L D+L D        L +V      A 
Sbjct: 616 GYKALASALRSNPSHLIELDLRGNDPGQSGVKELTDLLQD----PHCTLKTVRFLSPAAD 671

Query: 265 AIAELL-----KNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALG 318
            + + +     KN   L+ L L+ + +  +    L + L + +  I +L L         
Sbjct: 672 EVCQYVTRIEGKNPLFLKELTLSLHELGDTRVNQLTDLLQDKHCQISTLTLWNCKITEEQ 731

Query: 319 ANALAKGLEGNKS-LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
              L   L+ N S LREL L GN I + G+                              
Sbjct: 732 CVILTSALKSNPSHLRELELSGNEIKNTGVS----------------------------- 762

Query: 378 HVAEYIKN--CKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASA 434
           H+ E +K+  CK L  + L   ++ DE    +A ALK N + +  +DL GN + + G   
Sbjct: 763 HLCELLKDSHCK-LEKLRLSCCEMTDEACSAVASALKSNPSHLRELDLSGNKLENSGVKN 821

Query: 435 IARVL 439
           ++ +L
Sbjct: 822 LSDLL 826



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 4/149 (2%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNN-SILR 277
           LK L LS + +GD  V  L D+L D +  +  L L +  + +E    +   LK+N S LR
Sbjct: 688 LKELTLSLHELGDTRVNQLTDLLQDKHCQISTLTLWNCKITEEQCVILTSALKSNPSHLR 747

Query: 278 VLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS-LREL 335
            LEL+ N I  +G + L E L + +  +  L L+         +A+A  L+ N S LREL
Sbjct: 748 ELELSGNEIKNTGVSHLCELLKDSHCKLEKLRLSCCEMTDEACSAVASALKSNPSHLREL 807

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
            L GN + + G++ L   L   + KL +L
Sbjct: 808 DLSGNKLENSGVKNLSDLLMYPQCKLEIL 836



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 21/221 (9%)

Query: 213 VLQSN-IALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELL 270
           VL  N + L  L+LS + +GD   + L   L+D ++ VE+++L++  L ++ +  +A +L
Sbjct: 92  VLHVNPLLLTELDLSEDKLGDLDGEKLSAFLMDPHSKVEKIKLNNCKLLEKSSSVLATVL 151

Query: 271 KNNSILRVLELNNNM--------------IDYSGFTSLAEALLEN-STIRSLHLNGNY-- 313
            + +IL+ L LNN+               ID +   S  E L+   +  +SL     +  
Sbjct: 152 SSKTILKELNLNNSRLLDSGVRERSRQTEIDMNMLVSHLERLVSKMNQTKSLLTPSQFLS 211

Query: 314 GGALGANALAKGLEGNKS--LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
             A  A     G+ G     L+EL+L    +G++ +  L + L  +  KL +L +    +
Sbjct: 212 PAAEEACQFVTGVVGKNPLLLKELNLSDRQLGNKEMVQLAALLQDKHCKLIILQLRGCGL 271

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK 412
           + +    +A  +K+  SL  ++L  N++ D G +K+   L+
Sbjct: 272 TEESCSALATVLKSNSSLKELDLSNNNLQDSGVKKLQSGLE 312


>gi|201910|gb|AAA40406.1| Tcte-1 peptide [Mus musculus]
          Length = 506

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 2/187 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  Y    SLA  +    T++   L  +      A  L + L  + +L EL L 
Sbjct: 253 FEWNLFLFTYRDCYSLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLS 312

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G RA    LS    +L VL++ NN + A GA  +A  + +  +L+++NL +N 
Sbjct: 313 HNLIGDRGARAAAKLLS--HSRLRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNC 370

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + IA AL+ N+ ++ + LGGN +    A+ ++++L  N+ + SL+L+ N IG D
Sbjct: 371 IEDEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQD 430

Query: 459 GAKALSE 465
           G K L E
Sbjct: 431 GGKQLLE 437



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 105/212 (49%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + L   L+D+  +E L LS   + D GA
Sbjct: 269 AATIKACH-------TLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGA 321

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +A A+LL ++S LRVL L NN +   G  SLA AL  N+ +  L+L  N     G  A+A
Sbjct: 322 RAAAKLL-SHSRLRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIA 380

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             LE NK L  LHL GN +  E    L+S + +    L  L++  N I   G   + E I
Sbjct: 381 HALETNKCLSVLHLGGNKLS-EPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQLLEGI 439

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K++L  +L ++D+  E    I   L  NR
Sbjct: 440 SDNKTILEFDLRLSDVSQESEYLIGQVLHANR 471



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 1/170 (0%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           D+    L  SL  +   EE+  + N I   G +A   +L S+  L+ LNL+ N +   G 
Sbjct: 290 DDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKLL-SHSRLRVLNLANNQLQAPGA 348

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
           + L   L  N  +  L L    + DEG +AIA  L+ N  L VL L  N +     T L+
Sbjct: 349 QSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLS 408

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDE 345
           + L  N+T+ SL+L+ N+ G  G   L +G+  NK++ E  L  + +  E
Sbjct: 409 QMLTVNTTLVSLNLSCNHIGQDGGKQLLEGISDNKTILEFDLRLSDVSQE 458



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 34/190 (17%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A  +K   T+    L  + +    A  + R L D+
Sbjct: 246 VKDCGMNFEWNLFLFTYRD--CYSLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDH 303

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
             +  LDL++N IG  GA+A +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 304 PALEELDLSHNLIGDRGARAAAKLLS-HSRLRVLNLANNQLQAPGAQSLAHALAHNTNLV 362

Query: 503 ILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
            L+LR N + DE                             G  AIA AL+ N+ ++V  
Sbjct: 363 FLNLRLNCIEDE-----------------------------GGQAIAHALETNKCLSV-- 391

Query: 563 LNLANNFLTK 572
           L+L  N L++
Sbjct: 392 LHLGGNKLSE 401



 Score = 38.9 bits (89), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 43/98 (43%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           DEG   +A +L  N+    +    N ++         +L  N  L +LNLS N IG +G 
Sbjct: 373 DEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGG 432

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           K L + + DN  +    L   D+  E    I ++L  N
Sbjct: 433 KQLLEGISDNKTILEFDLRLSDVSQESEYLIGQVLHAN 470


>gi|146076661|ref|XP_001462971.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|134067053|emb|CAM65316.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 441

 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 170/369 (46%), Gaps = 53/369 (14%)

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL- 281
           ++L+G  +G  G   +   L  N  V  L LS  +L D GA AIA +L+ N+ L+ L L 
Sbjct: 39  VDLAGRALGPRGALIVGTALFKNTYVTSLDLSQNELGDGGAIAIASMLRFNTQLQHLNLS 98

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +N+M D  G  +LA A + N     +  +G  G            + N++L  L L GN 
Sbjct: 99  HNDMTDIGGI-ALASAFIPN-----VSPSGQPG------------QWNRTLFSLVLMGNK 140

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE-YIKNCKSLLWINLYMNDIG 400
            GD+ + A MS  ++    L  +D+  N++   G   +   Y +N   L    L  N +G
Sbjct: 141 FGDDTLLA-MSNAAACHRDLTRVDLSWNNVGQNGTKCLMRAYQRN--PLCVYQLAANALG 197

Query: 401 DEGAEKIADALKQ--NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           DEG   + +AL++   ++ TT++L  N+I   G  A+ R+L ++S++  + LA N IG  
Sbjct: 198 DEGTVYLCEALQRYGGKSQTTLNLYRNSISCPGTEAVGRLLANSSIVQDVSLAGNTIGFK 257

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           G +AL   L                  + A  +A       ++ IL+L  N + DEGA  
Sbjct: 258 GVQALQRQL------------------TDAAVIASC-----SLRILNLSDNWIGDEGAAS 294

Query: 519 LAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           +A   K    +L  +D++ N+I D GA AI  A   N     T L L N      G  A+
Sbjct: 295 VAAIIKANIPSLERLDVSENKITDVGATAIVTAALQN-----THLLLLNCEANCLGSKAV 349

Query: 579 TDAKDLVYE 587
                L++E
Sbjct: 350 DAVVRLIHE 358



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 147/319 (46%), Gaps = 19/319 (5%)

Query: 164 FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA---- 219
            +S+D+S    GD G   +A  L +N   + ++ + N +T  G  A       N++    
Sbjct: 64  VTSLDLSQNELGDGGAIAIASMLRFNTQLQHLNLSHNDMTDIGGIALASAFIPNVSPSGQ 123

Query: 220 -------LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
                  L +L L GN  GD+ +  + +    +  + R+ LS  ++   G K +    + 
Sbjct: 124 PGQWNRTLFSLVLMGNKFGDDTLLAMSNAAACHRDLTRVDLSWNNVGQNGTKCLMRAYQR 183

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLE--NSTIRSLHLNGNYGGALGANALAKGLEGNK 330
           N  L V +L  N +   G   L EAL      +  +L+L  N     G  A+ + L  + 
Sbjct: 184 NP-LCVYQLAANALGDEGTVYLCEALQRYGGKSQTTLNLYRNSISCPGTEAVGRLLANSS 242

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSS----RKGKLAVLDIGNNSISAKGAFHVAEYIK-N 385
            ++++ L GN+IG +G++AL   L+         L +L++ +N I  +GA  VA  IK N
Sbjct: 243 IVQDVSLAGNTIGFKGVQALQRQLTDAAVIASCSLRILNLSDNWIGDEGAASVAAIIKAN 302

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVI 445
             SL  +++  N I D GA  I  A  QN  +  ++   N + SK   A+ R++ +   +
Sbjct: 303 IPSLERLDVSENKITDVGATAIVTAALQNTHLLLLNCEANCLGSKAVDAVVRLIHETRTL 362

Query: 446 TSLDLAYNPIGADGAKALS 464
           TSL++A     AD  + L+
Sbjct: 363 TSLNVAGCVNSADHRRTLA 381



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 135/319 (42%), Gaps = 31/319 (9%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
           R   S+ + G  FGD+ L  ++ +   ++    V  + N +   G K      Q N  L 
Sbjct: 129 RTLFSLVLMGNKFGDDTLLAMSNAAACHRDLTRVDLSWNNVGQNGTKCLMRAYQRN-PLC 187

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVER--LQLSSVDLRDEGAKAIAELLKNNSILRVL 279
              L+ N +GDEG   LC+ L    G  +  L L    +   G +A+  LL N+SI++ +
Sbjct: 188 VYQLAANALGDEGTVYLCEALQRYGGKSQTTLNLYRNSISCPGTEAVGRLLANSSIVQDV 247

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            L  N I + G  +L   L + + I S                        SLR L+L  
Sbjct: 248 SLAGNTIGFKGVQALQRQLTDAAVIASC-----------------------SLRILNLSD 284

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGDEG  ++ + + +    L  LD+  N I+  GA  +         LL +N   N +
Sbjct: 285 NWIGDEGAASVAAIIKANIPSLERLDVSENKITDVGATAIVTAALQNTHLLLLNCEANCL 344

Query: 400 GDEGAEKIADALKQNRTITTIDLGG--NNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           G +  + +   + + RT+T++++ G  N+   +   AIA    D      ++L  NP  A
Sbjct: 345 GSKAVDAVVRLIHETRTLTSLNVAGCVNSADHRRTLAIAVGETDG---LHVELGPNPEDA 401

Query: 458 DGAKALSEVLKFHGNINTL 476
            GA+    + K   ++  L
Sbjct: 402 AGAEGTVLIEKITEHLQML 420



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 17/221 (7%)

Query: 373 AKGAFHVAEYIKN-CKSLLW---INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIH 428
           AKG      Y K   KS+L    ++L    +G  GA  +  AL +N  +T++DL  N + 
Sbjct: 16  AKGEKSTCFYTKKKWKSVLHETRVDLAGRALGPRGALIVGTALFKNTYVTSLDLSQNELG 75

Query: 429 SKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-----------KFHGNINTLK 477
             GA AIA +L+ N+ +  L+L++N +   G  AL+              +++  + +L 
Sbjct: 76  DGGAIAIASMLRFNTQLQHLNLSHNDMTDIGGIALASAFIPNVSPSGQPGQWNRTLFSLV 135

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           L   + G      +++    +  ++ +DL  N +   G KCL ++++     L    LA 
Sbjct: 136 LMGNKFGDDTLLAMSNAAACHRDLTRVDLSWNNVGQNGTKCLMRAYQ--RNPLCVYQLAA 193

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           N + D+G   + +AL+     + T+LNL  N ++  G  A+
Sbjct: 194 NALGDEGTVYLCEALQRYGGKSQTTLNLYRNSISCPGTEAV 234


>gi|320163000|gb|EFW39899.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 378

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 95/172 (55%), Gaps = 1/172 (0%)

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
           W+ L    IGD GA  IA+ALK N T+T +DLG N I   GA  IA  L+ N+ +  L L
Sbjct: 19  WLRLRNQKIGDAGAHAIAEALKLNTTVTWLDLGENQIGDAGAHTIAEALQVNTTVAVLLL 78

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
             N IG  GA+A++E LK    +  L+L   QIG +GA+ +A  L  N TI+ L L  N 
Sbjct: 79  EQNSIGDAGAQAIAETLKVKKEMRDLRLQNNQIGDAGAQALAQALSVNTTITTLSLGGNQ 138

Query: 511 LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTS 562
           + + GA+ LA++ K VN  LT ++L +N I   G  AI +    +    V +
Sbjct: 139 IGNVGAQALAEALK-VNTTLTQLELLYNCIGSVGTRAIDETCTVDRTCEVDT 189



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 91/161 (56%), Gaps = 1/161 (0%)

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           R L L     G  GA+A+A+ L+ N ++  L L  N IGD G   +   L      +AVL
Sbjct: 18  RWLRLRNQKIGDAGAHAIAEALKLNTTVTWLDLGENQIGDAGAHTIAEALQVNT-TVAVL 76

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
            +  NSI   GA  +AE +K  K +  + L  N IGD GA+ +A AL  N TITT+ LGG
Sbjct: 77  LLEQNSIGDAGAQAIAETLKVKKEMRDLRLQNNQIGDAGAQALAQALSVNTTITTLSLGG 136

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSE 465
           N I + GA A+A  LK N+ +T L+L YN IG+ G +A+ E
Sbjct: 137 NQIGNVGAQALAEALKVNTTLTQLELLYNCIGSVGTRAIDE 177



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 101/195 (51%), Gaps = 4/195 (2%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L + N  I   GA  +AE +K   ++ W++L  N IGD GA  IA+AL+ N T+  + L 
Sbjct: 20  LRLRNQKIGDAGAHAIAEALKLNTTVTWLDLGENQIGDAGAHTIAEALQVNTTVAVLLLE 79

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N+I   GA AIA  LK    +  L L  N IG  GA+AL++ L  +  I TL LG  QI
Sbjct: 80  QNSIGDAGAQAIAETLKVKKEMRDLRLQNNQIGDAGAQALAQALSVNTTITTLSLGGNQI 139

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G  GA+ +A+ L+ N T++ L+L  N +   G + + ++  V        +   + I   
Sbjct: 140 GNVGAQALAEALKVNTTLTQLELLYNCIGSVGTRAIDETCTVDRTCEVDTNHQISPI--- 196

Query: 544 GAFAIAQALKANEDV 558
            AF++   L   ED+
Sbjct: 197 -AFSLPPRLSTAEDL 210



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 80/146 (54%)

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
           AG  A    L+ N  +  L+L  N IGD G   + + L  N  V  L L    + D GA+
Sbjct: 30  AGAHAIAEALKLNTTVTWLDLGENQIGDAGAHTIAEALQVNTTVAVLLLEQNSIGDAGAQ 89

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
           AIAE LK    +R L L NN I  +G  +LA+AL  N+TI +L L GN  G +GA ALA+
Sbjct: 90  AIAETLKVKKEMRDLRLQNNQIGDAGAQALAQALSVNTTITTLSLGGNQIGNVGAQALAE 149

Query: 325 GLEGNKSLRELHLHGNSIGDEGIRAL 350
            L+ N +L +L L  N IG  G RA+
Sbjct: 150 ALKVNTTLTQLELLYNCIGSVGTRAI 175



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 29/160 (18%)

Query: 448 LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           L L    IG  GA A++E LK +  +  L LG  QIG +GA  +A+ L+ N T+++L L 
Sbjct: 20  LRLRNQKIGDAGAHAIAEALKLNTTVTWLDLGENQIGDAGAHTIAEALQVNTTVAVLLLE 79

Query: 508 ANGLRDEGAKCLAQSFKV---------------------------VNEALTSIDLAFNEI 540
            N + D GA+ +A++ KV                           VN  +T++ L  N+I
Sbjct: 80  QNSIGDAGAQAIAETLKVKKEMRDLRLQNNQIGDAGAQALAQALSVNTTITTLSLGGNQI 139

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
            + GA A+A+ALK N    +T L L  N +   G  A+ +
Sbjct: 140 GNVGAQALAEALKVN--TTLTQLELLYNCIGSVGTRAIDE 177



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 4/180 (2%)

Query: 202 ITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDE 261
           +TA   + +D V+ ++   + L L    IGD G   + + L  N  V  L L    + D 
Sbjct: 2   LTARQRELYDQVMNAS---RWLRLRNQKIGDAGAHAIAEALKLNTTVTWLDLGENQIGDA 58

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANA 321
           GA  IAE L+ N+ + VL L  N I  +G  ++AE L     +R L L  N  G  GA A
Sbjct: 59  GAHTIAEALQVNTTVAVLLLEQNSIGDAGAQAIAETLKVKKEMRDLRLQNNQIGDAGAQA 118

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
           LA+ L  N ++  L L GN IG+ G +AL   L      L  L++  N I + G   + E
Sbjct: 119 LAQALSVNTTITTLSLGGNQIGNVGAQALAEALKVNT-TLTQLELLYNCIGSVGTRAIDE 177



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%)

Query: 169 MSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
           +  +  GD G   +AE+L  N T   +    N I  AG       LQ N  +  L L  N
Sbjct: 22  LRNQKIGDAGAHAIAEALKLNTTVTWLDLGENQIGDAGAHTIAEALQVNTTVAVLLLEQN 81

Query: 229 PIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDY 288
            IGD G + + + L     +  L+L +  + D GA+A+A+ L  N+ +  L L  N I  
Sbjct: 82  SIGDAGAQAIAETLKVKKEMRDLRLQNNQIGDAGAQALAQALSVNTTITTLSLGGNQIGN 141

Query: 289 SGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
            G  +LAEAL  N+T+  L L  N  G++G  A+
Sbjct: 142 VGAQALAEALKVNTTLTQLELLYNCIGSVGTRAI 175



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 63/137 (45%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +D+     GD G   +AE+L  N T   +    N I  AG +A    L+    ++ L L 
Sbjct: 48  LDLGENQIGDAGAHTIAEALQVNTTVAVLLLEQNSIGDAGAQAIAETLKVKKEMRDLRLQ 107

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N IGD G + L   L  N  +  L L    + + GA+A+AE LK N+ L  LEL  N I
Sbjct: 108 NNQIGDAGAQALAQALSVNTTITTLSLGGNQIGNVGAQALAEALKVNTTLTQLELLYNCI 167

Query: 287 DYSGFTSLAEALLENST 303
              G  ++ E    + T
Sbjct: 168 GSVGTRAIDETCTVDRT 184



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 3/87 (3%)

Query: 504 LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSL 563
           L LR   + D GA  +A++ K+ N  +T +DL  N+I D GA  IA+AL+ N  VAV  L
Sbjct: 20  LRLRNQKIGDAGAHAIAEALKL-NTTVTWLDLGENQIGDAGAHTIAEALQVNTTVAV--L 76

Query: 564 NLANNFLTKFGQSALTDAKDLVYEMSE 590
            L  N +   G  A+ +   +  EM +
Sbjct: 77  LLEQNSIGDAGAQAIAETLKVKKEMRD 103


>gi|297260608|ref|XP_002798329.1| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Macaca mulatta]
          Length = 385

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 125/260 (48%), Gaps = 5/260 (1%)

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           S +EL+L    +G +G RAL S LSS    +  LD+ +N +   GA  +A  +    S+ 
Sbjct: 81  STQELNLRHRGLGPQGARALASSLSSNP-YVKRLDLRDNGLCGAGAEALAGALSKSSSIR 139

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L  N +G  GA+ +  A   NR +  I L GN +  + A  +A +L  ++ + SLDL
Sbjct: 140 AVDLSENQLGVAGAQALCAAFTINRAVQKIQLSGNGLEEQAAQYLAEILLAHTDLKSLDL 199

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           +YN +     + L   L  +  +  L + W  +   GA   A  L  N  + +LD+  NG
Sbjct: 200 SYNQLNEQAGETLGPALAENTGLTELNVSWNHLRGPGAVAFARGLEANIFLKVLDISYNG 259

Query: 511 LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
             D GA  + ++ K  N  L  ++++ N I   GA ++   L+ N+ + +  L L+  FL
Sbjct: 260 FGDPGASAVGEALK-ANNVLEELNMSNNRISAMGALSLGLGLRVNQTLRILVL-LSRIFL 317

Query: 571 TKFGQSALTDAKDLV--YEM 588
             F    L    D V  YE+
Sbjct: 318 LPFLLCGLGCCSDEVCGYEI 337



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 1/211 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           +++  R  G +G   LA SL  N   + +    NG+  AG +A  G L  + +++ ++LS
Sbjct: 85  LNLRHRGLGPQGARALASSLSSNPYVKRLDLRDNGLCGAGAEALAGALSKSSSIRAVDLS 144

Query: 227 GNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI 286
            N +G  G + LC     N  V+++QLS   L ++ A+ +AE+L  ++ L+ L+L+ N +
Sbjct: 145 ENQLGVAGAQALCAAFTINRAVQKIQLSGNGLEEQAAQYLAEILLAHTDLKSLDLSYNQL 204

Query: 287 DYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
           +     +L  AL EN+ +  L+++ N+    GA A A+GLE N  L+ L +  N  GD G
Sbjct: 205 NEQAGETLGPALAENTGLTELNVSWNHLRGPGAVAFARGLEANIFLKVLDISYNGFGDPG 264

Query: 347 IRALMSGLSSRKGKLAVLDIGNNSISAKGAF 377
             A+   L +    L  L++ NN ISA GA 
Sbjct: 265 ASAVGEALKANN-VLEELNMSNNRISAMGAL 294



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 92/175 (52%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           +  +VD+S    G  G   L  +   N+  +++  + NG+     +    +L ++  LK+
Sbjct: 137 SIRAVDLSENQLGVAGAQALCAAFTINRAVQKIQLSGNGLEEQAAQYLAEILLAHTDLKS 196

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L+LS N + ++  + L   L +N G+  L +S   LR  GA A A  L+ N  L+VL+++
Sbjct: 197 LDLSYNQLNEQAGETLGPALAENTGLTELNVSWNHLRGPGAVAFARGLEANIFLKVLDIS 256

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
            N     G +++ EAL  N+ +  L+++ N   A+GA +L  GL  N++LR L L
Sbjct: 257 YNGFGDPGASAVGEALKANNVLEELNMSNNRISAMGALSLGLGLRVNQTLRILVL 311


>gi|46370420|gb|AAS89989.1| caspase activation and recruitment domain protein family member 15
           [Saguinus oedipus]
          Length = 1013

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 121/244 (49%), Gaps = 5/244 (2%)

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G     ALA  L   +    L L  NS+GD G+  L+  L    G    L + N++I  +
Sbjct: 748 GPTECAALAFVLRHLRRPVALQLDYNSVGDIGVEQLLPCL----GVCKALYLRNSNILDR 803

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           G   + E+  +C+ L  + L+ N + D  A  +A  L   +    + LG N I + GA  
Sbjct: 804 GICKLIEHALHCEPLWKLVLFNNKLTDGCAHSMAKLLACKQNFLALRLGNNYITAAGAQV 863

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADM 494
           +A  L+ N+ +  L    N +G +GA+AL+E L  H ++  L L    IG+ GA+ +A M
Sbjct: 864 LAEGLRGNTSLQFLGFWGNRMGDEGAQALAEALSDHQSLRWLSLVGNNIGSVGAQALALM 923

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKA 554
           L  N  +  L L  N L+DEG   LA+  K  N +L  + L+ N I   GA A+ QAL+ 
Sbjct: 924 LAKNVMLEELCLEENHLQDEGVCSLAEGLK-KNSSLKILKLSNNCITYLGAEALLQALER 982

Query: 555 NEDV 558
           N+ +
Sbjct: 983 NDTI 986



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 131/280 (46%), Gaps = 10/280 (3%)

Query: 187  GYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNA 246
            G N    +++F + G T     AF  VL+       L L  N +GD GV+ L   L    
Sbjct: 734  GLNVGHLKLTFCSMGPTECAALAF--VLRHLRRPVALQLDYNSVGDIGVEQLLPCL---- 787

Query: 247  GVER-LQLSSVDLRDEG-AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTI 304
            GV + L L + ++ D G  K I   L    + +++  NN + D     S+A+ L      
Sbjct: 788  GVCKALYLRNSNILDRGICKLIEHALHCEPLWKLVLFNNKLTDGCAH-SMAKLLACKQNF 846

Query: 305  RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
             +L L  NY  A GA  LA+GL GN SL+ L   GN +GDEG +AL   LS  +  L  L
Sbjct: 847  LALRLGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRMGDEGAQALAEALSDHQS-LRWL 905

Query: 365  DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGG 424
             +  N+I + GA  +A  +     L  + L  N + DEG   +A+ LK+N ++  + L  
Sbjct: 906  SLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSN 965

Query: 425  NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALS 464
            N I   GA A+ + L+ N  I  + L  N    +    LS
Sbjct: 966  NCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKLS 1005



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 4/267 (1%)

Query: 243 VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENS 302
           V    V  L+L+   +      A+A +L++      L+L+ N +   G   L   L    
Sbjct: 732 VRGLNVGHLKLTFCSMGPTECAALAFVLRHLRRPVALQLDYNSVGDIGVEQLLPCL---G 788

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
             ++L+L  +     G   L +     + L +L L  N + D G    M+ L + K    
Sbjct: 789 VCKALYLRNSNILDRGICKLIEHALHCEPLWKLVLFNNKLTD-GCAHSMAKLLACKQNFL 847

Query: 363 VLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
            L +GNN I+A GA  +AE ++   SL ++  + N +GDEGA+ +A+AL  ++++  + L
Sbjct: 848 ALRLGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRMGDEGAQALAEALSDHQSLRWLSL 907

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
            GNNI S GA A+A +L  N ++  L L  N +  +G  +L+E LK + ++  LKL    
Sbjct: 908 VGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNC 967

Query: 483 IGASGAEFVADMLRYNNTISILDLRAN 509
           I   GAE +   L  N+TI  + LR N
Sbjct: 968 ITYLGAEALLQALERNDTILEVWLRGN 994



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 93/180 (51%), Gaps = 4/180 (2%)

Query: 182  LAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDI 241
            +A+ L   Q    +    N ITAAG +     L+ N +L+ L   GN +GDEG + L + 
Sbjct: 836  MAKLLACKQNFLALRLGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRMGDEGAQALAEA 895

Query: 242  LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            L D+  +  L L   ++   GA+A+A +L  N +L  L L  N +   G  SLAE L +N
Sbjct: 896  LSDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 955

Query: 302  STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
            S+++ L L+ N    LGA AL + LE N ++ E+ L GN+   E +      LS R  +L
Sbjct: 956  SSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEV----DKLSCRDTRL 1011



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 118/251 (47%), Gaps = 6/251 (2%)

Query: 159  KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI-KAFDGVLQSN 217
            + LR   ++ +   + GD G+  L   LG     + +    + I   GI K  +  L   
Sbjct: 760  RHLRRPVALQLDYNSVGDIGVEQLLPCLG---VCKALYLRNSNILDRGICKLIEHALHCE 816

Query: 218  IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILR 277
              L  L L  N + D     +  +L        L+L +  +   GA+ +AE L+ N+ L+
Sbjct: 817  -PLWKLVLFNNKLTDGCAHSMAKLLACKQNFLALRLGNNYITAAGAQVLAEGLRGNTSLQ 875

Query: 278  VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
             L    N +   G  +LAEAL ++ ++R L L GN  G++GA ALA  L  N  L EL L
Sbjct: 876  FLGFWGNRMGDEGAQALAEALSDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCL 935

Query: 338  HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
              N + DEG+ +L  GL  +   L +L + NN I+  GA  + + ++   ++L + L  N
Sbjct: 936  EENHLQDEGVCSLAEGL-KKNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGN 994

Query: 398  DIGDEGAEKIA 408
                E  +K++
Sbjct: 995  TFSLEEVDKLS 1005


>gi|410982171|ref|XP_003997433.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 5 [Felis
            catus]
          Length = 1184

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 104/431 (24%), Positives = 181/431 (41%), Gaps = 35/431 (8%)

Query: 155  NEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVL 214
            +EF  E +  S      R   DE    L   L  + +  ++  + + ++ A +K     L
Sbjct: 730  DEFT-EAQPLSPQGKPARRLADEWWGDLCFVLSSHPSLRQLDLSGSILSEAAMKTLCATL 788

Query: 215  -QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN- 272
             Q    ++ L   G  +   G++ L   L+ N  ++ L L S  LR+E      + L++ 
Sbjct: 789  RQPTCKIQNLIFKGAQVTTLGLRHLWTTLISNRNIKYLSLESTHLREEDLMMACKALRHP 848

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSL 332
            N +L  L L     D+ G T     ++    + S+                       SL
Sbjct: 849  NCLLESLRL-----DHCGLTPTCCMVISQILLMSI-----------------------SL 880

Query: 333  RELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWI 392
            + L L GN +  +GI+ L   L + +  L  L +GN  ++A     +A  + + ++L  +
Sbjct: 881  KSLSLVGNKMTAQGIKPLCHALIASQCTLQKLILGNCGLTAADCQDLASGLTSGQNLTHL 940

Query: 393  NLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLA 451
             L  N +G  G   +  A+K  N  +  + L   N+   G   +A  L  N  +T L L+
Sbjct: 941  CLSSNSLGSAGMNLLCRAMKSPNCGLQRLILKECNLDVAGCGFLAFALMGNRHLTHLSLS 1000

Query: 452  YNPIGADGAKALSEVL-KFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
             NP+  DG   L EV+ +   ++  L+L  C + A+  + ++ ++  +  +  LDL AN 
Sbjct: 1001 MNPLEDDGMNLLCEVMMEPSCHLQDLELVKCHLTATCCKNLSQVISRSKYLKSLDLAANA 1060

Query: 511  LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFL 570
            L D G   L +  K    +L  + L    +  D   A+A AL  ++   +TSLNL  N  
Sbjct: 1061 LGDHGIVELCEGLKHKKASLRRLGLEACGLTSDCCEALASALLCSQ--RLTSLNLMRNNF 1118

Query: 571  TKFGQSALTDA 581
            +  G   L  A
Sbjct: 1119 SPAGMMKLCPA 1129


>gi|149508354|ref|XP_001507977.1| PREDICTED: T-complex-associated testis-expressed protein 1-like
           [Ornithorhynchus anatinus]
          Length = 455

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 2/220 (0%)

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
           E N  +  +    SLA AL    T++ L L  +      A  L  GL  + +L+EL L  
Sbjct: 221 EWNLFLFTHRDCRSLAGALKACRTLKVLKLTRSRVTDEKARILVHGLLDHPALQELDLSH 280

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N IGD G RA+   L+    +L  L++ NN + A GA  +A  + +  +L  +NL +N I
Sbjct: 281 NLIGDRGARAVAKLLN--HSRLRALNLSNNRVRAPGAQALARALAHNTTLTSLNLRLNRI 338

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEG + +A AL+ N T+  + LG N +    A+ +++VL  N+ + S++L+ N IG DG
Sbjct: 339 EDEGGQALAHALQTNDTLVVLHLGSNELSEPTATLLSQVLSVNTTLASVNLSCNHIGPDG 398

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNN 499
            K L E +  +  +    L   ++G      +   L+ N 
Sbjct: 399 GKQLLEGMADNRTVVEFDLRLAEVGQESEYLMGQALKANQ 438



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 113/213 (53%), Gaps = 2/213 (0%)

Query: 203 TAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG 262
           T    ++  G L++   LK L L+ + + DE  + L   L+D+  ++ L LS   + D G
Sbjct: 228 THRDCRSLAGALKACRTLKVLKLTRSRVTDEKARILVHGLLDHPALQELDLSHNLIGDRG 287

Query: 263 AKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANAL 322
           A+A+A+LL N+S LR L L+NN +   G  +LA AL  N+T+ SL+L  N     G  AL
Sbjct: 288 ARAVAKLL-NHSRLRALNLSNNRVRAPGAQALARALAHNTTLTSLNLRLNRIEDEGGQAL 346

Query: 323 AKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEY 382
           A  L+ N +L  LHL  N +  E    L+S + S    LA +++  N I   G   + E 
Sbjct: 347 AHALQTNDTLVVLHLGSNELS-EPTATLLSQVLSVNTTLASVNLSCNHIGPDGGKQLLEG 405

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
           + + ++++  +L + ++G E    +  ALK N+
Sbjct: 406 MADNRTVVEFDLRLAEVGQESEYLMGQALKANQ 438



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 2/199 (1%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L VL +  + ++ + A  +   + +  +L  ++L  N IGD GA  +A  L  +R +  +
Sbjct: 245 LKVLKLTRSRVTDEKARILVHGLLDHPALQELDLSHNLIGDRGARAVAKLLNHSR-LRAL 303

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           +L  N + + GA A+AR L  N+ +TSL+L  N I  +G +AL+  L+ +  +  L LG 
Sbjct: 304 NLSNNRVRAPGAQALARALAHNTTLTSLNLRLNRIEDEGGQALAHALQTNDTLVVLHLGS 363

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            ++    A  ++ +L  N T++ ++L  N +  +G K L +     N  +   DL   E+
Sbjct: 364 NELSEPTATLLSQVLSVNTTLASVNLSCNHIGPDGGKQLLEGM-ADNRTVVEFDLRLAEV 422

Query: 541 RDDGAFAIAQALKANEDVA 559
             +  + + QALKAN++ A
Sbjct: 423 GQESEYLMGQALKANQEAA 441



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 2/209 (0%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           +LA  L+  ++L+ L L  + + DE  R L+ GL      L  LD+ +N I  +GA  VA
Sbjct: 234 SLAGALKACRTLKVLKLTRSRVTDEKARILVHGLLDHPA-LQELDLSHNLIGDRGARAVA 292

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           + + + + L  +NL  N +   GA+ +A AL  N T+T+++L  N I  +G  A+A  L+
Sbjct: 293 KLLNHSR-LRALNLSNNRVRAPGAQALARALAHNTTLTSLNLRLNRIEDEGGQALAHALQ 351

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            N  +  L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N T
Sbjct: 352 TNDTLVVLHLGSNELSEPTATLLSQVLSVNTTLASVNLSCNHIGPDGGKQLLEGMADNRT 411

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEA 529
           +   DLR   +  E    + Q+ K   EA
Sbjct: 412 VVEFDLRLAEVGQESEYLMGQALKANQEA 440



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 8/207 (3%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFF-------LAESLGYNQTAEEVSFAANGITAAGIKAFD 211
           +EL     V   G NF      F       LA +L   +T + +    + +T    +   
Sbjct: 205 EELHLVYGVRDCGMNFEWNLFLFTHRDCRSLAGALKACRTLKVLKLTRSRVTDEKARILV 264

Query: 212 GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLK 271
             L  + AL+ L+LS N IGD G + +  +L +++ +  L LS+  +R  GA+A+A  L 
Sbjct: 265 HGLLDHPALQELDLSHNLIGDRGARAVAKLL-NHSRLRALNLSNNRVRAPGAQALARALA 323

Query: 272 NNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
           +N+ L  L L  N I+  G  +LA AL  N T+  LHL  N      A  L++ L  N +
Sbjct: 324 HNTTLTSLNLRLNRIEDEGGQALAHALQTNDTLVVLHLGSNELSEPTATLLSQVLSVNTT 383

Query: 332 LRELHLHGNSIGDEGIRALMSGLSSRK 358
           L  ++L  N IG +G + L+ G++  +
Sbjct: 384 LASVNLSCNHIGPDGGKQLLEGMADNR 410



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 1/187 (0%)

Query: 159 KELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           K  R    + ++     DE    L   L  +   +E+  + N I   G +A   +L  + 
Sbjct: 240 KACRTLKVLKLTRSRVTDEKARILVHGLLDHPALQELDLSHNLIGDRGARAVAKLLNHS- 298

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
            L+ LNLS N +   G + L   L  N  +  L L    + DEG +A+A  L+ N  L V
Sbjct: 299 RLRALNLSNNRVRAPGAQALARALAHNTTLTSLNLRLNRIEDEGGQALAHALQTNDTLVV 358

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L L +N +     T L++ L  N+T+ S++L+ N+ G  G   L +G+  N+++ E  L 
Sbjct: 359 LHLGSNELSEPTATLLSQVLSVNTTLASVNLSCNHIGPDGGKQLLEGMADNRTVVEFDLR 418

Query: 339 GNSIGDE 345
              +G E
Sbjct: 419 LAEVGQE 425



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 34/203 (16%)

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIA 436
            H+   +++C      NL++    D     +A ALK  RT+  + L  + +  + A  + 
Sbjct: 207 LHLVYGVRDCGMNFEWNLFLFTHRD--CRSLAGALKACRTLKVLKLTRSRVTDEKARILV 264

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
             L D+  +  LDL++N IG  GA+A++++L  H  +  L L   ++ A GA+ +A  L 
Sbjct: 265 HGLLDHPALQELDLSHNLIGDRGARAVAKLLN-HSRLRALNLSNNRVRAPGAQALARALA 323

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
           +N T                             LTS++L  N I D+G  A+A AL+ N+
Sbjct: 324 HNTT-----------------------------LTSLNLRLNRIEDEGGQALAHALQTND 354

Query: 557 DVAVTSLNLANNFLTKFGQSALT 579
            + V  L+L +N L++   + L+
Sbjct: 355 TLVV--LHLGSNELSEPTATLLS 375



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 6/123 (4%)

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
            ++L+  LK    +  LKL   ++    A  +   L  +  +  LDL  N + D GA+ +
Sbjct: 232 CRSLAGALKACRTLKVLKLTRSRVTDEKARILVHGLLDHPALQELDLSHNLIGDRGARAV 291

Query: 520 AQSFKVVNEA-LTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
           A   K++N + L +++L+ N +R  GA A+A+AL  N    +TSLNL  N +   G  AL
Sbjct: 292 A---KLLNHSRLRALNLSNNRVRAPGAQALARALAHN--TTLTSLNLRLNRIEDEGGQAL 346

Query: 579 TDA 581
             A
Sbjct: 347 AHA 349


>gi|399497974|emb|CCG20315.1| Ran GTPase activating protein 2 [Solanum kurtzianum]
          Length = 553

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLESQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+++ L      LAVL++  N I+A+
Sbjct: 339 GPEVGPVLCKALSKHENLTEIYLSYLNLEDEGAIAIVNALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLESQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGPVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  I +ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIVNALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLESQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  + + L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGPVLCKALSKHENLTEIYLSYLNLEDEGAIAIVNALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 5/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S ++ L+L+ N  G  G  A  K LE   +L EL L  + I  E   A+ S L    
Sbjct: 211 LEGSNLKFLNLSDNALGEKGVRAFGKLLESQTNLEELFLMNDGISQEAANAV-SELVPST 269

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE +K    L         +G EG   + +AL     + 
Sbjct: 270 EKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +    + + L  +  +T + L+Y  +  +GA A+   LK    ++  L+
Sbjct: 330 KLDLRDNMFGPEVGPVLCKALSKHENLTEIYLSYLNLEDEGAIAIVNALKDSAPSLAVLE 389

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I A  A  +A  +     ++ L L  N L+DEGA  +A++ +  +  L  +D++ 
Sbjct: 390 MAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSS 448

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AI   LK+++  L VLE+  N I     ++
Sbjct: 343 GPVLCKALSKHENLTEIYLSYLNLEDEGAIAIVNALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLESQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGPVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AI  ALK +   ++  L +A N +T
Sbjct: 369 EGAIAIVNALK-DSAPSLAVLEMAGNDIT 396


>gi|399497998|emb|CCG20327.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   GI+AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGIRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 115/493 (23%), Positives = 206/493 (41%), Gaps = 63/493 (12%)

Query: 69  RVYRQSQSDNALTTAPVKQIASFVV--------PAGVFVSATFVLWKLVEKLL------M 114
           R YR    + A   A   + A+F +        P G   SA  +  +   KL+      M
Sbjct: 44  RKYRSLSKEEAAKNAEEIEDAAFTIANQHYEKEPDGDGSSAVQLYARECSKLILEILKKM 103

Query: 115 PKPSRPS------KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVD 168
           PKP           PT +   + +  G      F      E+++ L    +   ++S + 
Sbjct: 104 PKPEDKEISISEVVPTVQETFFDISKGKR---AFIEA--EEAQELLKPLKEPGNSYSKIC 158

Query: 169 MSGRNFGDEG-------LFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            S R+FG +        L  L + L     ++ V+          +  F   L+ +  LK
Sbjct: 159 FSNRSFGIDAARIAGPILAALKDQLKEVDLSDFVAGRHEAEALDVMNIFSEALEGS-NLK 217

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNLS N +G++G++     L     +E L L +  +  E A A++EL+ +   L+VL  
Sbjct: 218 FLNLSDNALGEKGIRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHF 277

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  N 
Sbjct: 278 HNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNM 337

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            G E    L   LS                             N ++L  I L   ++ D
Sbjct: 338 FGPEVGLVLCKALS-----------------------------NHENLTEIYLSYLNLED 368

Query: 402 EGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           EGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +GA
Sbjct: 369 EGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGA 428

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
             +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   L 
Sbjct: 429 IQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELK 488

Query: 521 QSFKVVNEALTSI 533
           + FK   E L S+
Sbjct: 489 EIFKKSPEMLASL 501



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++GIRA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGIRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASC-IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459


>gi|399498102|emb|CCG20379.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 206/491 (41%), Gaps = 66/491 (13%)

Query: 34  PLSFAL-PFSGTRRCFRLKRLVVKAAARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFV 92
           P S  L P S   R   ++R+    ++     R+ R + ++  + NA     V    +F 
Sbjct: 12  PFSIKLWPPSENTRKMLVERMTNNLSSPTIFTRKYRSLSKEEAAKNAEEIEDV----AFT 67

Query: 93  V--------PAGVFVSATFVLWKLVEKLL------MPKPSRPS------KPTAEGMNWSV 132
           +        P G   SA  +  +   KL+      MPKP           PT +   + +
Sbjct: 68  IANQHYEKEPDGDGSSAVQLYARECSKLILEILKKMPKPEDKEISISEVVPTVQETFFDI 127

Query: 133 GAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLG-YNQT 191
             G      F G    E+++ L    +   ++S +  S R+FG +        L      
Sbjct: 128 SKGKR---AFIGA--EEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQ 182

Query: 192 AEEVS---FAANGITAAGIKA---FDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
            +EV    F A    A  + A   F   L+ +  LK LNLS N +G++GV+     L   
Sbjct: 183 LKEVDLSDFVAGRHEAEALDAMNIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQ 241

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE-----ALLE 300
             +E L L +  +  E A A++EL+ +   L+VL  +NNM    G  ++AE      LLE
Sbjct: 242 TNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLE 301

Query: 301 N-----------------------STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           +                       S ++ L L  N  G      L K L  +++L E++L
Sbjct: 302 DFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYL 361

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
              ++ DEG  A+ + L      LAVL++  N I+A+ A  +A  I   + L  ++L  N
Sbjct: 362 SYLNLEDEGAIAMANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGEN 421

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           ++ DEGA +IA AL+ +  +  +D+  N +   GA  +A+ +        L++  N I  
Sbjct: 422 ELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISE 481

Query: 458 DGAKALSEVLK 468
           +G   L E+ K
Sbjct: 482 EGVDELKEIFK 492



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASC-IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 133/283 (46%), Gaps = 5/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S ++ L+L+ N  G  G  A  K L+   +L EL L  + I  E   A+ S L    
Sbjct: 211 LEGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAV-SELVPST 269

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE +K    L         +G EG   + +AL     + 
Sbjct: 270 EKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +    + + L ++  +T + L+Y  +  +GA A++  LK    ++  L+
Sbjct: 330 KLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVLE 389

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I A  A  +A  +     ++ L L  N L+DEGA  +A++ +  +  L  +D++ 
Sbjct: 390 MAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSS 448

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489


>gi|399498094|emb|CCG20375.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 550

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 206/493 (41%), Gaps = 63/493 (12%)

Query: 69  RVYRQSQSDNALTTAPVKQIASFVV--------PAGVFVSATFVLWKLVEKLL------M 114
           R YR    + A   A   + A+F +        P G   SA  +  +   KL+      M
Sbjct: 44  RKYRSLSKEEAAKNAEEIEDAAFTIANQHYEKEPDGDGSSAVQLYARECSKLILEILKKM 103

Query: 115 PKPSRPS------KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVD 168
           PKP           PT +   + +  G      F      E+++ L    +   ++S + 
Sbjct: 104 PKPEDKEISISEVVPTVQETFFDISKGKR---AFIEA--EEAQELLKPLKEPGNSYSKIC 158

Query: 169 MSGRNFGDEG-------LFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            S R+FG +        L  L + L     ++ V+          +  F   L+ +  LK
Sbjct: 159 FSNRSFGIDAARIAGPILAALKDQLKEVDLSDFVAGRHEAEALDVMNIFSEALEGS-NLK 217

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNLS N +G++GV+     L     +E L L +  +  E A A++EL+ +   L+VL  
Sbjct: 218 FLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHF 277

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  N 
Sbjct: 278 HNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLKKLDLRDNM 337

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            G E    L   LS                             N ++L  I L   ++ D
Sbjct: 338 FGPEVGLVLCKALS-----------------------------NHENLTEIYLSYLNLED 368

Query: 402 EGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           EGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +GA
Sbjct: 369 EGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGA 428

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
             +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   L 
Sbjct: 429 IQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELK 488

Query: 521 QSFKVVNEALTSI 533
           + FK   E L S+
Sbjct: 489 EIFKKSPEMLASL 501



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMYSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASC-IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459


>gi|399498090|emb|CCG20373.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS                             N ++L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALS-----------------------------NHENLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 7/223 (3%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
               +   +    ++G+ G   + + L   + +  LDLR N    E    L ++    +E
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-NHE 354

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            LT I L++  + D+GA AIA ALK +   ++  L +A N +T
Sbjct: 355 NLTEIYLSYLNLEDEGAIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|149604235|ref|XP_001519938.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2-like [Ornithorhynchus anatinus]
          Length = 1017

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 136/273 (49%), Gaps = 4/273 (1%)

Query: 248  VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
            VE ++L+   +      A+A +L+       L+L+ N +   G   L   L      R+L
Sbjct: 741  VEHVKLTYCGVGPAECAALAFVLRFLRRPVSLQLDYNSVGDVGLEQLLPCL---KVCRAL 797

Query: 308  HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            +L  N     G + L        SL++L L  N + D+   +L   L  ++  LA L +G
Sbjct: 798  YLRDNNISDHGISKLVDQALLCDSLQKLALFNNKLTDDSAHSLAKLLKYKENFLA-LRLG 856

Query: 368  NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNI 427
            NN I+A GA  +AE ++   SL ++ L+ N +G+EGA+ +ADAL  +R++  + L GNN+
Sbjct: 857  NNHITAVGAKVLAEGLEGNHSLQFLGLWGNTVGEEGAQALADALHGHRSLKWLSLVGNNV 916

Query: 428  HSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASG 487
             S GA A+A +L  N V+  L L  N +      +L+E LK + ++  LKL    I   G
Sbjct: 917  GSVGARALALMLGKNVVLEELCLEENRLNDQDVCSLAEGLKKNSSLKVLKLSNNNITYQG 976

Query: 488  AEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
               +   L+ N+T+  + LR N    E  + L+
Sbjct: 977  VVSLLQTLKKNDTLKSIWLRGNTFTPEEIESLS 1009



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 125/266 (46%), Gaps = 9/266 (3%)

Query: 308  HLNGNYGGALGAN--ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            H+   Y G   A   ALA  L   +    L L  NS+GD G+  L+  L   +     L 
Sbjct: 743  HVKLTYCGVGPAECAALAFVLRFLRRPVSLQLDYNSVGDVGLEQLLPCLKVCRA----LY 798

Query: 366  IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
            + +N+IS  G   + +    C SL  + L+ N + D+ A  +A  LK       + LG N
Sbjct: 799  LRDNNISDHGISKLVDQALLCDSLQKLALFNNKLTDDSAHSLAKLLKYKENFLALRLGNN 858

Query: 426  NIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
            +I + GA  +A  L+ N  +  L L  N +G +GA+AL++ L  H ++  L L    +G+
Sbjct: 859  HITAVGAKVLAEGLEGNHSLQFLGLWGNTVGEEGAQALADALHGHRSLKWLSLVGNNVGS 918

Query: 486  SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
             GA  +A ML  N  +  L L  N L D+    LA+  K  N +L  + L+ N I   G 
Sbjct: 919  VGARALALMLGKNVVLEELCLEENRLNDQDVCSLAEGLK-KNSSLKVLKLSNNNITYQGV 977

Query: 546  FAIAQALKANEDVAVTSLNLANNFLT 571
             ++ Q LK N+   + S+ L  N  T
Sbjct: 978  VSLLQTLKKND--TLKSIWLRGNTFT 1001



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 114/244 (46%), Gaps = 29/244 (11%)

Query: 221  KTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
            + L L  N I D G+  L D  +    +++L L +  L D+ A ++A+LLK       L 
Sbjct: 795  RALYLRDNNISDHGISKLVDQALLCDSLQKLALFNNKLTDDSAHSLAKLLKYKENFLALR 854

Query: 281  LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
            L NN I   G   LAE L  N +++ L L GN  G  GA ALA  L G++SL+ L L GN
Sbjct: 855  LGNNHITAVGAKVLAEGLEGNHSLQFLGLWGNTVGEEGAQALADALHGHRSLKWLSLVGN 914

Query: 341  SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
            ++G  G RAL             L +G N +  +                 + L  N + 
Sbjct: 915  NVGSVGARAL------------ALMLGKNVVLEE-----------------LCLEENRLN 945

Query: 401  DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
            D+    +A+ LK+N ++  + L  NNI  +G  ++ + LK N  + S+ L  N    +  
Sbjct: 946  DQDVCSLAEGLKKNSSLKVLKLSNNNITYQGVVSLLQTLKKNDTLKSIWLRGNTFTPEEI 1005

Query: 461  KALS 464
            ++LS
Sbjct: 1006 ESLS 1009



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 89/174 (51%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           L+ F  KL  +S  +L +  K    F ++ +   +    G   LAE L  N + + +   
Sbjct: 825 LALFNNKLTDDSAHSLAKLLKYKENFLALRLGNNHITAVGAKVLAEGLEGNHSLQFLGLW 884

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N +   G +A    L  + +LK L+L GN +G  G + L  +L  N  +E L L    L
Sbjct: 885 GNTVGEEGAQALADALHGHRSLKWLSLVGNNVGSVGARALALMLGKNVVLEELCLEENRL 944

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN 312
            D+   ++AE LK NS L+VL+L+NN I Y G  SL + L +N T++S+ L GN
Sbjct: 945 NDQDVCSLAEGLKKNSSLKVLKLSNNNITYQGVVSLLQTLKKNDTLKSIWLRGN 998



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 91/175 (52%)

Query: 176  DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
            D+    LA+ L Y +    +    N ITA G K     L+ N +L+ L L GN +G+EG 
Sbjct: 834  DDSAHSLAKLLKYKENFLALRLGNNHITAVGAKVLAEGLEGNHSLQFLGLWGNTVGEEGA 893

Query: 236  KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
            + L D L  +  ++ L L   ++   GA+A+A +L  N +L  L L  N ++     SLA
Sbjct: 894  QALADALHGHRSLKWLSLVGNNVGSVGARALALMLGKNVVLEELCLEENRLNDQDVCSLA 953

Query: 296  EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
            E L +NS+++ L L+ N     G  +L + L+ N +L+ + L GN+   E I +L
Sbjct: 954  EGLKKNSSLKVLKLSNNNITYQGVVSLLQTLKKNDTLKSIWLRGNTFTPEEIESL 1008



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 6/249 (2%)

Query: 161  LRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGI-KAFDGVLQSNIA 219
            LR   S+ +   + GD GL  L   L   +    +    N I+  GI K  D  L  + +
Sbjct: 766  LRRPVSLQLDYNSVGDVGLEQLLPCL---KVCRALYLRDNNISDHGISKLVDQALLCD-S 821

Query: 220  LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            L+ L L  N + D+    L  +L        L+L +  +   GAK +AE L+ N  L+ L
Sbjct: 822  LQKLALFNNKLTDDSAHSLAKLLKYKENFLALRLGNNHITAVGAKVLAEGLEGNHSLQFL 881

Query: 280  ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             L  N +   G  +LA+AL  + +++ L L GN  G++GA ALA  L  N  L EL L  
Sbjct: 882  GLWGNTVGEEGAQALADALHGHRSLKWLSLVGNNVGSVGARALALMLGKNVVLEELCLEE 941

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N + D+ + +L  GL  +   L VL + NN+I+ +G   + + +K   +L  I L  N  
Sbjct: 942  NRLNDQDVCSLAEGL-KKNSSLKVLKLSNNNITYQGVVSLLQTLKKNDTLKSIWLRGNTF 1000

Query: 400  GDEGAEKIA 408
              E  E ++
Sbjct: 1001 TPEEIESLS 1009


>gi|399498098|emb|CCG20377.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS                             N ++L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALS-----------------------------NHENLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459


>gi|326509281|dbj|BAJ91557.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326521232|dbj|BAJ96819.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 552

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 136/280 (48%), Gaps = 3/280 (1%)

Query: 200 NGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR 259
           N +   G++AF  +L+S   L+ L +  + I  E  K L +++     ++ L   +    
Sbjct: 225 NALGEKGVRAFTELLKSQGDLEELYVMNDGISGEAAKALSELIPSTEKLKVLHFHNNMTG 284

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           DEGA  IAE++K +  L     +   I   G  +LAEAL   + ++ L +  N  G    
Sbjct: 285 DEGAMPIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDIRDNLFGVEAG 344

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
            AL+K L     L EL+L   ++ +EG  A++  L     +L VL++  N I+AK A  V
Sbjct: 345 VALSKTLPKLGGLVELYLSDLNLENEGTIAIVDVLKQSAPQLEVLEMAGNEITAKAAKAV 404

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARV 438
           AE +   +SL  + L  N++ D GA  IA +L++    +  +D+  N     GA   A+ 
Sbjct: 405 AECLTAMQSLKKLTLAENELKDAGAVTIAKSLQEGHPGLEELDVSTNLFQRSGARCFAQA 464

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           + +      L++  N I  +G   + E+LK  G  N+L++
Sbjct: 465 VANKPGFALLNINSNFISDEGIDEVKEILK--GGENSLEV 502



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 132/261 (50%), Gaps = 5/261 (1%)

Query: 322 LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAE 381
            +K L G+  LR L++  N++G++G+RA    L S+ G L  L + N+ IS + A  ++E
Sbjct: 208 FSKALAGS-VLRYLNISDNALGEKGVRAFTELLKSQ-GDLEELYVMNDGISGEAAKALSE 265

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
            I + + L  ++ + N  GDEGA  IA+ +K++  + +       I S G  A+A  L  
Sbjct: 266 LIPSTEKLKVLHFHNNMTGDEGAMPIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGT 325

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN-NT 500
            + +  LD+  N  G +   ALS+ L   G +  L L    +   G   + D+L+ +   
Sbjct: 326 CTRLKKLDIRDNLFGVEAGVALSKTLPKLGGLVELYLSDLNLENEGTIAIVDVLKQSAPQ 385

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
           + +L++  N +  + AK +A+    + ++L  + LA NE++D GA  IA++L+      +
Sbjct: 386 LEVLEMAGNEITAKAAKAVAECLTAM-QSLKKLTLAENELKDAGAVTIAKSLQEGHP-GL 443

Query: 561 TSLNLANNFLTKFGQSALTDA 581
             L+++ N   + G      A
Sbjct: 444 EELDVSTNLFQRSGARCFAQA 464


>gi|440899616|gb|ELR50892.1| hypothetical protein M91_02865, partial [Bos grunniens mutus]
          Length = 392

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 136/256 (53%), Gaps = 3/256 (1%)

Query: 161 LRAFSSVDMS--GRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNI 218
           LR  S+ ++S   R  G +G   LA +L  N   + +    NG+  AG +A  G L  + 
Sbjct: 76  LRQGSAPELSLRHRGLGPQGARALAHALTSNPCIKRLDLRDNGLCGAGAEALAGALSRSC 135

Query: 219 ALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRV 278
           ++  ++LS N +G EG + +C  L  +  V+RLQL+   L ++ A+ +A+LL  ++ L+ 
Sbjct: 136 SICDVDLSENRLGAEGAQAICAALAVSPAVQRLQLAGNGLEEQAAQCLAKLLLAHTGLKS 195

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L+L+ N ++     +L  AL EN+ +  L+++ N+   LGA A+A+GLE N  LR L + 
Sbjct: 196 LDLSYNQLNDQAGETLGPALAENTGLMELNVSWNHLRGLGAIAIARGLEANIFLRVLDIS 255

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N  GD G  A+   L +    L  L + NN ISA GA  +   ++  ++L  + +  N 
Sbjct: 256 YNGCGDSGASAVGEALKTNN-VLEELYMSNNRISAAGALSLGLGLRVNQTLRILAVSRNP 314

Query: 399 IGDEGAEKIADALKQN 414
           +  EG   +  +++ N
Sbjct: 315 MQSEGCSGVLKSVQAN 330



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 115/234 (49%), Gaps = 2/234 (0%)

Query: 331 SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           S  EL L    +G +G RAL   L+S    +  LD+ +N +   GA  +A  +    S+ 
Sbjct: 80  SAPELSLRHRGLGPQGARALAHALTSNP-CIKRLDLRDNGLCGAGAEALAGALSRSCSIC 138

Query: 391 WINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L  N +G EGA+ I  AL  +  +  + L GN +  + A  +A++L  ++ + SLDL
Sbjct: 139 DVDLSENRLGAEGAQAICAALAVSPAVQRLQLAGNGLEEQAAQCLAKLLLAHTGLKSLDL 198

Query: 451 AYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANG 510
           +YN +     + L   L  +  +  L + W  +   GA  +A  L  N  + +LD+  NG
Sbjct: 199 SYNQLNDQAGETLGPALAENTGLMELNVSWNHLRGLGAIAIARGLEANIFLRVLDISYNG 258

Query: 511 LRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
             D GA  + ++ K  N  L  + ++ N I   GA ++   L+ N+ + + +++
Sbjct: 259 CGDSGASAVGEALK-TNNVLEELYMSNNRISAAGALSLGLGLRVNQTLRILAVS 311



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 30/296 (10%)

Query: 251 LQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN 310
           L L    L  +GA+A+A  L +N  ++ L+L +N +  +G  +LA AL  + +I  + L+
Sbjct: 84  LSLRHRGLGPQGARALAHALTSNPCIKRLDLRDNGLCGAGAEALAGALSRSCSICDVDLS 143

Query: 311 GNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
            N  GA GA A+   L  + +++ L L GN + ++  + L   L +  G           
Sbjct: 144 ENRLGAEGAQAICAALAVSPAVQRLQLAGNGLEEQAAQCLAKLLLAHTG----------- 192

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
                             L  ++L  N + D+  E +  AL +N  +  +++  N++   
Sbjct: 193 ------------------LKSLDLSYNQLNDQAGETLGPALAENTGLMELNVSWNHLRGL 234

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEF 490
           GA AIAR L+ N  +  LD++YN  G  GA A+ E LK +  +  L +   +I A+GA  
Sbjct: 235 GAIAIARGLEANIFLRVLDISYNGCGDSGASAVGEALKTNNVLEELYMSNNRISAAGALS 294

Query: 491 VADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAF 546
           +   LR N T+ IL +  N ++ EG   + +S +   ++   + L F++I+ +  F
Sbjct: 295 LGLGLRVNQTLRILAVSRNPMQSEGCSGVLKSVQANPQSALEL-LDFSDIQVNREF 349



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 28/184 (15%)

Query: 146 LFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAA 205
           L  ++ Q L +         S+D+S     D+    L  +L  N    E++ + N +   
Sbjct: 175 LEEQAAQCLAKLLLAHTGLKSLDLSYNQLNDQAGETLGPALAENTGLMELNVSWNHLRGL 234

Query: 206 GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKA 265
           G  A    L++NI L+ L++S N  G                            D GA A
Sbjct: 235 GAIAIARGLEANIFLRVLDISYNGCG----------------------------DSGASA 266

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           + E LK N++L  L ++NN I  +G  SL   L  N T+R L ++ N   + G + + K 
Sbjct: 267 VGEALKTNNVLEELYMSNNRISAAGALSLGLGLRVNQTLRILAVSRNPMQSEGCSGVLKS 326

Query: 326 LEGN 329
           ++ N
Sbjct: 327 VQAN 330


>gi|399498010|emb|CCG20333.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTDLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 206/493 (41%), Gaps = 63/493 (12%)

Query: 69  RVYRQSQSDNALTTAPVKQIASFVV--------PAGVFVSATFVLWKLVEKLL------M 114
           R YR    + A   A   + A+F +        P G   SA  +  +   KL+      M
Sbjct: 44  RKYRSLSKEEAAKNAEEIEDAAFTIANQHYEKEPDGDGSSAVQLYARECSKLILEILKKM 103

Query: 115 PKPSRPS------KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVD 168
           PKP           PT +   + +  G      F      E+++ L    +   ++S + 
Sbjct: 104 PKPEDKEISISEVVPTVQETFFDISKGKR---AFIEA--EEAQELLKPLKEPGNSYSKIC 158

Query: 169 MSGRNFGDEG-------LFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            S R+FG +        L  L + L     ++ V+          +  F   L+ +  LK
Sbjct: 159 FSNRSFGIDAARIAGPILAALKDQLKEVDLSDFVAGRHEAEALDVMNIFSEALEGS-NLK 217

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNLS N +G++GV+     L     +E L L +  +  E A A++EL+ +   L+VL  
Sbjct: 218 FLNLSDNALGEKGVRAFGKFLQSQTDLEELFLMNDGISQEAANAVSELVPSTEKLKVLHF 277

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  N 
Sbjct: 278 HNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNM 337

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            G E    L   LS                             N ++L  I L   ++ D
Sbjct: 338 FGPEVGLVLCKALS-----------------------------NHENLTEIYLSYLNLED 368

Query: 402 EGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           EGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +GA
Sbjct: 369 EGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGA 428

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
             +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   L 
Sbjct: 429 IQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELK 488

Query: 521 QSFKVVNEALTSI 533
           + FK   E L S+
Sbjct: 489 EIFKKSPEMLASL 501



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTD-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASC-IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459


>gi|115313283|gb|AAI24388.1| Si:ch211-234g24.1 protein [Danio rerio]
          Length = 527

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 158/348 (45%), Gaps = 21/348 (6%)

Query: 147 FRESKQTLN--EFAKELRAFSSV-DMSGRNFGDEGLFFLAESLGYN--QTAEE------- 194
           +R++ Q LN     K L+    + D++ RN   E L    E L Y   ++ EE       
Sbjct: 116 YRQACQKLNCKPIPKVLKQTQDLKDLTQRN---ECLDLKGEKLDYKSCESLEEIFKRVQF 172

Query: 195 --VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNP-IGDEGVKCLCDILVDNAGVERL 251
             V      +   G  A   +++   +   LN+S N  IG  G +    ++     ++ L
Sbjct: 173 KLVDLEQTNLDEDGASALFDMIEYYESATHLNISNNKHIGTRGWQAAAHMMRKTNSLQYL 232

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
              +  L D  A  +A  L+ +S L VL L N+ I       LA AL  N  +R L+L  
Sbjct: 233 DARNTPLLDHSAPFVARALRISSSLTVLHLENSGISGRPLMLLATALKMNMNLRELYLAE 292

Query: 312 NYGGALGANA-LAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNS 370
           N    L  +A L   L+ N +++ L L  N I D G+  +  GL  ++  L  L + NN 
Sbjct: 293 NKLNGLQDSAQLGNLLKFNYNIQILDLRNNHILDSGLAYVCEGLKEQRKGLVTLVLWNNQ 352

Query: 371 ISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSK 430
           ++  G  ++A  +   +SL  +NL  N +G+EG  K+ D L  NR+I  + L    +  +
Sbjct: 353 LTHNGMGYLAAALPFTQSLETLNLGHNAVGNEGVHKLKDGLISNRSILRLGLASTKLSCE 412

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKL 478
           GA AIA  + ++  +  LD+  N I   G  ALS  L F  N + L+L
Sbjct: 413 GAVAIAEFIAESPRLLRLDMRENEIKTGGLMALS--LAFKVNTSLLRL 458



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 141/320 (44%), Gaps = 31/320 (9%)

Query: 218 IALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS-VDLRDEGAKAIAELLKNNSIL 276
           +  K ++L    + ++G   L D++        L +S+   +   G +A A +++  + L
Sbjct: 170 VQFKLVDLEQTNLDEDGASALFDMIEYYESATHLNISNNKHIGTRGWQAAAHMMRKTNSL 229

Query: 277 RVLELNNN-MIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLREL 335
           + L+  N  ++D+S    +A AL  +S++  LHL  +         LA  L+ N +LREL
Sbjct: 230 QYLDARNTPLLDHSA-PFVARALRISSSLTVLHLENSGISGRPLMLLATALKMNMNLREL 288

Query: 336 HLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLY 395
           +L  N +      A +  L      + +LD+ NN I   G  +V E +K           
Sbjct: 289 YLAENKLNGLQDSAQLGNLLKFNYNIQILDLRNNHILDSGLAYVCEGLK----------- 337

Query: 396 MNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPI 455
                           +Q + + T+ L  N +   G   +A  L     + +L+L +N +
Sbjct: 338 ----------------EQRKGLVTLVLWNNQLTHNGMGYLAAALPFTQSLETLNLGHNAV 381

Query: 456 GADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEG 515
           G +G   L + L  + +I  L L   ++   GA  +A+ +  +  +  LD+R N ++  G
Sbjct: 382 GNEGVHKLKDGLISNRSILRLGLASTKLSCEGAVAIAEFIAESPRLLRLDMRENEIKTGG 441

Query: 516 AKCLAQSFKVVNEALTSIDL 535
              L+ +FK VN +L  +DL
Sbjct: 442 LMALSLAFK-VNTSLLRLDL 460



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 139/310 (44%), Gaps = 6/310 (1%)

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
           E L L    L  +  +++ E+ K     ++++L    +D  G ++L + +    +   L+
Sbjct: 146 ECLDLKGEKLDYKSCESLEEIFKRVQ-FKLVDLEQTNLDEDGASALFDMIEYYESATHLN 204

Query: 309 LNGN-YGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
           ++ N + G  G  A A  +    SL+ L      + D     +   L      L VL + 
Sbjct: 205 ISNNKHIGTRGWQAAAHMMRKTNSLQYLDARNTPLLDHSAPFVARALRI-SSSLTVLHLE 263

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDI-GDEGAEKIADALKQNRTITTIDLGGNN 426
           N+ IS +    +A  +K   +L  + L  N + G + + ++ + LK N  I  +DL  N+
Sbjct: 264 NSGISGRPLMLLATALKMNMNLRELYLAENKLNGLQDSAQLGNLLKFNYNIQILDLRNNH 323

Query: 427 IHSKGASAIARVLKDNSV-ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGA 485
           I   G + +   LK+    + +L L  N +  +G   L+  L F  ++ TL LG   +G 
Sbjct: 324 ILDSGLAYVCEGLKEQRKGLVTLVLWNNQLTHNGMGYLAAALPFTQSLETLNLGHNAVGN 383

Query: 486 SGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGA 545
            G   + D L  N +I  L L +  L  EGA  +A+ F   +  L  +D+  NEI+  G 
Sbjct: 384 EGVHKLKDGLISNRSILRLGLASTKLSCEGAVAIAE-FIAESPRLLRLDMRENEIKTGGL 442

Query: 546 FAIAQALKAN 555
            A++ A K N
Sbjct: 443 MALSLAFKVN 452



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 108/226 (47%), Gaps = 4/226 (1%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN-DIGDEGAEKIADALKQNR 415
           ++ +  ++D+   ++   GA  + + I+  +S   +N+  N  IG  G +  A  +++  
Sbjct: 168 KRVQFKLVDLEQTNLDEDGASALFDMIEYYESATHLNISNNKHIGTRGWQAAAHMMRKTN 227

Query: 416 TITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINT 475
           ++  +D     +    A  +AR L+ +S +T L L  + I       L+  LK + N+  
Sbjct: 228 SLQYLDARNTPLLDHSAPFVARALRISSSLTVLHLENSGISGRPLMLLATALKMNMNLRE 287

Query: 476 LKLGWCQI-GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSID 534
           L L   ++ G   +  + ++L++N  I ILDLR N + D G   + +  K   + L ++ 
Sbjct: 288 LYLAENKLNGLQDSAQLGNLLKFNYNIQILDLRNNHILDSGLAYVCEGLKEQRKGLVTLV 347

Query: 535 LAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           L  N++  +G   +A AL   +  ++ +LNL +N +   G   L D
Sbjct: 348 LWNNQLTHNGMGYLAAALPFTQ--SLETLNLGHNAVGNEGVHKLKD 391



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 1/145 (0%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           +D+   +  D GL ++ E L   +     +    N +T  G+      L    +L+TLNL
Sbjct: 317 LDLRNNHILDSGLAYVCEGLKEQRKGLVTLVLWNNQLTHNGMGYLAAALPFTQSLETLNL 376

Query: 226 SGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNM 285
             N +G+EGV  L D L+ N  + RL L+S  L  EGA AIAE +  +  L  L++  N 
Sbjct: 377 GHNAVGNEGVHKLKDGLISNRSILRLGLASTKLSCEGAVAIAEFIAESPRLLRLDMRENE 436

Query: 286 IDYSGFTSLAEALLENSTIRSLHLN 310
           I   G  +L+ A   N+++  L L+
Sbjct: 437 IKTGGLMALSLAFKVNTSLLRLDLD 461


>gi|156366882|ref|XP_001627150.1| predicted protein [Nematostella vectensis]
 gi|156214051|gb|EDO35050.1| predicted protein [Nematostella vectensis]
          Length = 431

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 115/236 (48%), Gaps = 1/236 (0%)

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G   +A+ L +N  +  L+L  N  G  GA  L++ L  N  +  ++L GN I  EGI A
Sbjct: 36  GVRVVAKVLEQNLFVNILNLFDNGIGPHGAQDLSRMLSVNCFITHMNLSGNMIRKEGIIA 95

Query: 350 LMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIAD 409
           +   L      L  L++    I+ K      + I     L  +  + N++ D+G+  +++
Sbjct: 96  IGIMLQE-SASLVFLNLAKCGINGKDMMEFCKGIATNPHLKSLIFHSNNLSDQGSRLLSE 154

Query: 410 ALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
           AL  N  + T+DL  N+I     + +A+ L+ N  I  LDL++N   + G  A+   L  
Sbjct: 155 ALASNTALETLDLSWNDIRPGAMATLAKGLRLNHTIQELDLSWNTFQSRGVIAVQWFLTH 214

Query: 470 HGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKV 525
             ++ TL +  C I   GAE +A +LR N  + +L L  N  ++ G  C+ ++ ++
Sbjct: 215 STSLQTLDISNCGIHLDGAEVIAKVLRANRNLQVLKLGRNPFQNAGVPCILEAVRL 270



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 3/279 (1%)

Query: 192 AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERL 251
            E VS    G+   G++    VL+ N+ +  LNL  N IG  G + L  +L  N  +  +
Sbjct: 22  TECVSLPHYGLGDKGVRVVAKVLEQNLFVNILNLFDNGIGPHGAQDLSRMLSVNCFITHM 81

Query: 252 QLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNG 311
            LS   +R EG  AI  +L+ ++ L  L L    I+        + +  N  ++SL  + 
Sbjct: 82  NLSGNMIRKEGIIAIGIMLQESASLVFLNLAKCGINGKDMMEFCKGIATNPHLKSLIFHS 141

Query: 312 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
           N     G+  L++ L  N +L  L L  N I    +  L  GL      +  LD+  N+ 
Sbjct: 142 NNLSDQGSRLLSEALASNTALETLDLSWNDIRPGAMATLAKGLRLNH-TIQELDLSWNTF 200

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKG 431
            ++G   V  ++ +  SL  +++    I  +GAE IA  L+ NR +  + LG N   + G
Sbjct: 201 QSRGVIAVQWFLTHSTSLQTLDISNCGIHLDGAEVIAKVLRANRNLQVLKLGRNPFQNAG 260

Query: 432 ASAIARVLKDNSVITSLDLAYNPIG--ADGAKALSEVLK 468
              I   ++ N+  +  +L ++ IG   D  + L  +L+
Sbjct: 261 VPCILEAVRLNARSSLRELTFDGIGFMKDSERELEALLE 299



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 5/257 (1%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +GD+GV+ +  +L  N  V  L L    +   GA+ ++ +L  N  +  + L+ NMI   
Sbjct: 32  LGDKGVRVVAKVLEQNLFVNILNLFDNGIGPHGAQDLSRMLSVNCFITHMNLSGNMIRKE 91

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANAL--AKGLEGNKSLRELHLHGNSIGDEGI 347
           G  ++   L E++++  + LN    G  G + +   KG+  N  L+ L  H N++ D+G 
Sbjct: 92  GIIAIGIMLQESASL--VFLNLAKCGINGKDMMEFCKGIATNPHLKSLIFHSNNLSDQGS 149

Query: 348 RALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKI 407
           R L   L+S    L  LD+  N I       +A+ ++   ++  ++L  N     G   +
Sbjct: 150 RLLSEALASNTA-LETLDLSWNDIRPGAMATLAKGLRLNHTIQELDLSWNTFQSRGVIAV 208

Query: 408 ADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL 467
              L  + ++ T+D+    IH  GA  IA+VL+ N  +  L L  NP    G   + E +
Sbjct: 209 QWFLTHSTSLQTLDISNCGIHLDGAEVIAKVLRANRNLQVLKLGRNPFQNAGVPCILEAV 268

Query: 468 KFHGNINTLKLGWCQIG 484
           + +   +  +L +  IG
Sbjct: 269 RLNARSSLRELTFDGIG 285



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 31/265 (11%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R+ +   + + +  +  KG   VA+ ++    +  +NL+ N IG  GA+ ++  L  N  
Sbjct: 18  RECETECVSLPHYGLGDKGVRVVAKVLEQNLFVNILNLFDNGIGPHGAQDLSRMLSVNCF 77

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL-----------------AYNP----- 454
           IT ++L GN I  +G  AI  +L++++ +  L+L                 A NP     
Sbjct: 78  ITHMNLSGNMIRKEGIIAIGIMLQESASLVFLNLAKCGINGKDMMEFCKGIATNPHLKSL 137

Query: 455 ------IGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRA 508
                 +   G++ LSE L  +  + TL L W  I       +A  LR N+TI  LDL  
Sbjct: 138 IFHSNNLSDQGSRLLSEALASNTALETLDLSWNDIRPGAMATLAKGLRLNHTIQELDLSW 197

Query: 509 NGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANN 568
           N  +  G   + Q F   + +L ++D++   I  DGA  IA+ L+AN ++ V  L L  N
Sbjct: 198 NTFQSRGVIAV-QWFLTHSTSLQTLDISNCGIHLDGAEVIAKVLRANRNLQV--LKLGRN 254

Query: 569 FLTKFGQSALTDAKDLVYEMSEKEV 593
                G   + +A  L    S +E+
Sbjct: 255 PFQNAGVPCILEAVRLNARSSLREL 279



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 4/178 (2%)

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
           +++ C++   ++L    +GD+G   +A  L+QN  +  ++L  N I   GA  ++R+L  
Sbjct: 16  FLRECETEC-VSLPHYGLGDKGVRVVAKVLEQNLFVNILNLFDNGIGPHGAQDLSRMLSV 74

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI-GASGAEFVADMLRYNNT 500
           N  IT ++L+ N I  +G  A+  +L+   ++  L L  C I G    EF    +  N  
Sbjct: 75  NCFITHMNLSGNMIRKEGIIAIGIMLQESASLVFLNLAKCGINGKDMMEFCKG-IATNPH 133

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           +  L   +N L D+G++ L+++    N AL ++DL++N+IR      +A+ L+ N  +
Sbjct: 134 LKSLIFHSNNLSDQGSRLLSEAL-ASNTALETLDLSWNDIRPGAMATLAKGLRLNHTI 190



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 32/279 (11%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLS 226
           V +     GD+G+  +A+ L  N     ++   NGI   G +    +L  N  +  +NLS
Sbjct: 25  VSLPHYGLGDKGVRVVAKVLEQNLFVNILNLFDNGIGPHGAQDLSRMLSVNCFITHMNLS 84

Query: 227 GNPIGDEGV-------------------KC---------LCDILVDNAGVERLQLSSVDL 258
           GN I  EG+                   KC          C  +  N  ++ L   S +L
Sbjct: 85  GNMIRKEGIIAIGIMLQESASLVFLNLAKCGINGKDMMEFCKGIATNPHLKSLIFHSNNL 144

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            D+G++ ++E L +N+ L  L+L+ N I      +LA+ L  N TI+ L L+ N   + G
Sbjct: 145 SDQGSRLLSEALASNTALETLDLSWNDIRPGAMATLAKGLRLNHTIQELDLSWNTFQSRG 204

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
             A+   L  + SL+ L +    I  +G   +   L + +  L VL +G N     G   
Sbjct: 205 VIAVQWFLTHSTSLQTLDISNCGIHLDGAEVIAKVLRANRN-LQVLKLGRNPFQNAGVPC 263

Query: 379 VAEYIK-NCKSLLWINLYMNDIG-DEGAEKIADALKQNR 415
           + E ++ N +S L   L  + IG  + +E+  +AL ++R
Sbjct: 264 ILEAVRLNARSSLR-ELTFDGIGFMKDSERELEALLEDR 301



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 94/191 (49%), Gaps = 2/191 (1%)

Query: 165 SSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLN 224
           + +++SG     EG+  +   L  + +   ++ A  GI    +  F   + +N  LK+L 
Sbjct: 79  THMNLSGNMIRKEGIIAIGIMLQESASLVFLNLAKCGINGKDMMEFCKGIATNPHLKSLI 138

Query: 225 LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
              N + D+G + L + L  N  +E L LS  D+R      +A+ L+ N  ++ L+L+ N
Sbjct: 139 FHSNNLSDQGSRLLSEALASNTALETLDLSWNDIRPGAMATLAKGLRLNHTIQELDLSWN 198

Query: 285 MIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL-GANALAKGLEGNKSLRELHLHGNSIG 343
                G  ++   L  ++++++L ++ N G  L GA  +AK L  N++L+ L L  N   
Sbjct: 199 TFQSRGVIAVQWFLTHSTSLQTLDIS-NCGIHLDGAEVIAKVLRANRNLQVLKLGRNPFQ 257

Query: 344 DEGIRALMSGL 354
           + G+  ++  +
Sbjct: 258 NAGVPCILEAV 268



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 30/151 (19%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
           A  ++D+S  +     +  LA+ L  N T +E+  + N   + G+ A    L  + +L+T
Sbjct: 161 ALETLDLSWNDIRPGAMATLAKGLRLNHTIQELDLSWNTFQSRGVIAVQWFLTHSTSLQT 220

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           L++S            C I +D                 GA+ IA++L+ N  L+VL+L 
Sbjct: 221 LDISN-----------CGIHLD-----------------GAEVIAKVLRANRNLQVLKLG 252

Query: 283 NNMIDYSGFTSLAEALLEN--STIRSLHLNG 311
            N    +G   + EA+  N  S++R L  +G
Sbjct: 253 RNPFQNAGVPCILEAVRLNARSSLRELTFDG 283


>gi|399497848|emb|CCG20252.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 123/529 (23%), Positives = 221/529 (41%), Gaps = 68/529 (12%)

Query: 34  PLSFAL-PFSGTRRCFRLKRLVVKAAARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFV 92
           P S  L P S   R   ++R+    ++     R+ R + ++  + NA     V    +F 
Sbjct: 12  PFSIKLWPPSENTRKMLVERMTNNLSSPTIFTRKYRSLSKEEAAKNAEEIEDV----AFT 67

Query: 93  V--------PAGVFVSATFVLWKLVEKLL------MPKPSRPS------KPTAEGMNWSV 132
           +        P G   SA  +  +   KL+      MPKP           PT +   + +
Sbjct: 68  IANQHYEKEPDGDGSSAVQLYARECSKLILEILKKMPKPEDKEISISEVVPTVQETFFDI 127

Query: 133 GAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEG-------LFFLAES 185
             G      F G    E+++ L    +   ++S +  S R+FG +        L  L + 
Sbjct: 128 SKGKR---AFIGA--EEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQ 182

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L     ++ V+          +  F   L+ +  LK LNLS N +G++GV+     L   
Sbjct: 183 LKEVDLSDFVAGRHEAEALDVMNIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQ 241

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             +E L L +  +  E A A++EL+ +   L+VL  +NNM    G  ++AE +  +  + 
Sbjct: 242 TNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLE 301

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
               +    G+ G + L + L     L++L L  N  G E    L   LS          
Sbjct: 302 DFRCSSTRVGSEGGSVLCEALGMYSHLKKLDLRDNMFGPEVGLVLCKALS---------- 351

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN-RTITTIDLGG 424
                              N ++L  I L   ++ DEGA  IA+ALK +  ++  +++ G
Sbjct: 352 -------------------NHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAG 392

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N+I ++ ASAIA  +    ++  L L  N +  +GA  +++ L+ H ++  + +    + 
Sbjct: 393 NDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALR 452

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
            +GA  +A  + + +   +L++  N + +EG   L + FK   E L S+
Sbjct: 453 RAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEMLASL 501



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMYSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASC-IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459


>gi|399497850|emb|CCG20253.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKEEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA++LK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + +     +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEVLASL 501



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+K L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGSK-LKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKEEFKLLNVNGNFISEEGVDELKEIFKKSPEVL 498



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 19/270 (7%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHV-AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
               G N   A    ++ +E ++  K L ++NL  N +G++G       L+    +  + 
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSK-LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELF 248

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    
Sbjct: 249 LMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSST 308

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           ++G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + 
Sbjct: 309 RVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLE 367

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLT 571
           D+GA AIA +LK +   ++  L +A N +T
Sbjct: 368 DEGAIAIANSLK-DSAPSLAVLEMAGNDIT 396


>gi|399497956|emb|CCG20306.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASC-IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AIA ALK +   ++  L +A N +T
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|399497860|emb|CCG20258.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKEEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA++LK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + +     +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEVLASL 501



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+K L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGSK-LKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKEEFKLLNVNGNFISEEGVDELKEIFKKSPEVL 498



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 19/270 (7%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHV-AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
               G N   A    ++ +E ++  K L ++NL  N +G++G       L+    +  + 
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSK-LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELF 248

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    
Sbjct: 249 LMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSST 308

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           ++G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + 
Sbjct: 309 RVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLE 367

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLT 571
           D+GA AIA +LK +   ++  L +A N +T
Sbjct: 368 DEGAIAIANSLK-DSAPSLAVLEMAGNDIT 396


>gi|399498104|emb|CCG20380.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 115/493 (23%), Positives = 206/493 (41%), Gaps = 63/493 (12%)

Query: 69  RVYRQSQSDNALTTAPVKQIASFVV--------PAGVFVSATFVLWKLVEKLL------M 114
           R YR    + A   A   + A+F +        P G   SA  +  +   KL+      M
Sbjct: 44  RKYRSLSKEEAAKNAEEIEDAAFTIANQHYEKEPDGDGSSAVQLYARECSKLILEILKKM 103

Query: 115 PKPSRPS------KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVD 168
           PKP           PT +   + +  G      F      E+++ L    +   ++S + 
Sbjct: 104 PKPEDKEISISEVVPTVQETFFDISKGKR---AFIEA--EEAQELLKPLKEPGNSYSKIC 158

Query: 169 MSGRNFGDEG-------LFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            S R+FG +        L  L + L     ++ V+          +  F   L+ +  LK
Sbjct: 159 FSNRSFGIDAARIAGPILAALKDQLKEVDLSDFVAGRHEAEALDVMNIFSEALEGS-NLK 217

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL  
Sbjct: 218 FLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHF 277

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  N 
Sbjct: 278 HNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNM 337

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            G E    L   LS  +                             +L  I L   ++ D
Sbjct: 338 FGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNLED 368

Query: 402 EGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           EGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +GA
Sbjct: 369 EGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGA 428

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
             +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   L 
Sbjct: 429 IQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELK 488

Query: 521 QSFKVVNEALTSI 533
           + FK   E L S+
Sbjct: 489 EIFKKSPEMLASL 501



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459


>gi|344299115|ref|XP_003421233.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3-like
            isoform 1 [Loxodonta africana]
          Length = 1038

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 3/258 (1%)

Query: 163  AFSSVDMSGRNFGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            + + +D+S    GD G+  L E+L +     + +     G+T         VL SN  L 
Sbjct: 744  SLTELDLSDNTVGDPGMRVLCETLQHPGCNIQRLWLGRCGLTHDCCLGISSVLCSNQKLV 803

Query: 222  TLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLE 280
             L+LS N +GD GVK LC  L      +++L L S  L  +    +A +L  N  L  L 
Sbjct: 804  ELDLSNNTLGDSGVKHLCVGLRHLFCNLQKLWLVSCCLTSDCCPDLASVLTTNQSLTRLY 863

Query: 281  LNNNMIDYSGFTSLAE-ALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
            +  N +  +G   L E A      ++ L L  +   +L   AL+  L  N +L  L+L  
Sbjct: 864  MGENALGDAGVGILCEKAKHPQCKLQKLGLVNSGLTSLCCPALSLALSTNPNLTHLYLRD 923

Query: 340  NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
            N++GD+GI+ L  GL +   KL +L++ N S+++   + ++  + + +SL  ++L  ND+
Sbjct: 924  NALGDKGIKILCEGLMNPNCKLQMLELDNCSLTSHCCWDLSTLLTSNQSLQELSLGSNDL 983

Query: 400  GDEGAEKIADALKQNRTI 417
            GD G   + + LKQ   +
Sbjct: 984  GDLGVILLCEVLKQQSCL 1001



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 3/144 (2%)

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVADMLR 496
           VL  N  +T LDL+ N +G  G + L E L+  G NI  L LG C +       ++ +L 
Sbjct: 738 VLSTNPSLTELDLSDNTVGDPGMRVLCETLQHPGCNIQRLWLGRCGLTHDCCLGISSVLC 797

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            N  +  LDL  N L D G K L    + +   L  + L    +  D    +A  L  N+
Sbjct: 798 SNQKLVELDLSNNTLGDSGVKHLCVGLRHLFCNLQKLWLVSCCLTSDCCPDLASVLTTNQ 857

Query: 557 DVAVTSLNLANNFLTKFGQSALTD 580
             ++T L +  N L   G   L +
Sbjct: 858 --SLTRLYMGENALGDAGVGILCE 879



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 12/158 (7%)

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           SL  ++L  N +GD G   + + L+     I  + LG   +       I+ VL  N  + 
Sbjct: 744 SLTELDLSDNTVGDPGMRVLCETLQHPGCNIQRLWLGRCGLTHDCCLGISSVLCSNQKLV 803

Query: 447 SLDLAYNPIGADGAKALSEVLK-FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            LDL+ N +G  G K L   L+    N+  L L  C + +     +A +L  N +++ L 
Sbjct: 804 ELDLSNNTLGDSGVKHLCVGLRHLFCNLQKLWLVSCCLTSDCCPDLASVLTTNQSLTRLY 863

Query: 506 LRANGLRDEGA----------KCLAQSFKVVNEALTSI 533
           +  N L D G           +C  Q   +VN  LTS+
Sbjct: 864 MGENALGDAGVGILCEKAKHPQCKLQKLGLVNSGLTSL 901


>gi|399497990|emb|CCG20323.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 206/493 (41%), Gaps = 63/493 (12%)

Query: 69  RVYRQSQSDNALTTAPVKQIASFVV--------PAGVFVSATFVLWKLVEKLL------M 114
           R YR    + A   A   + A+F +        P G   SA  +  +   KL+      M
Sbjct: 44  RKYRSLSKEEAAKNAEEIEDAAFTIANQHYEKEPDGDGSSAVQLYARECSKLILEILKKM 103

Query: 115 PKPSRPS------KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVD 168
           PKP           PT +   + +  G      F      E+++ L    +   ++S + 
Sbjct: 104 PKPEDKEISISEVVPTVQETFFDISKGKR---AFIEA--EEAQELLKPLKEPGNSYSKIC 158

Query: 169 MSGRNFGDEG-------LFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALK 221
            S R+FG +        L  L + L     ++ V+          +  F   L+ +  LK
Sbjct: 159 FSNRSFGIDAARIAGPILAALKDQLKEVDLSDFVAGRHEAEALDVMNIFSEALEGS-NLK 217

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNLS N +G++GV+     L     +E L L +  +  E A A++EL+ +   L+VL  
Sbjct: 218 FLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHF 277

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  N 
Sbjct: 278 HNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNM 337

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            G E    L   LS                             N ++L  I L   ++ D
Sbjct: 338 FGPEVGLVLCKALS-----------------------------NHENLTEIYLSYLNLED 368

Query: 402 EGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           EGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +GA
Sbjct: 369 EGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGA 428

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
             +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   L 
Sbjct: 429 IQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELK 488

Query: 521 QSFKVVNEALTSI 533
           + FK   E L S+
Sbjct: 489 EIFKKSPEMLASL 501



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASC-IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459


>gi|399498064|emb|CCG20360.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +DL  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ LK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + L    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEVLASL 501



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  ++L++N L + G   L
Sbjct: 441 -LIEVDLSSNALRRAGARVL 459



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ L  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEVL 498



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AIA  LK +   ++  L +A N +T
Sbjct: 369 EGAIAIANTLK-DSAPSLAVLEMAGNDIT 396


>gi|399498046|emb|CCG20351.1| Ran GTPase activating protein 2 [Solanum tarijense]
          Length = 553

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      +AVL++  N I+ +
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSVAVLEMAGNDITVE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +I+ AL+++R +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQISKALERHRHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I  + ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSVAVLEMAGNDITVEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +S+ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQISKALERHRHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  I++AL+ +   
Sbjct: 383 PSVAVLEMAGNDITVEAASAIASC-IAAKQLLAKLSLGENELKDEGAIQISKALERHRH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 7/223 (3%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAFAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
               +   +    ++G+ G   + + L   + +  LDLR N    E    L ++    +E
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHE 354

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            LT I L++  + D+GA AIA ALK +   +V  L +A N +T
Sbjct: 355 NLTEIYLSYLNLEDEGAIAIANALK-DSAPSVAVLEMAGNDIT 396


>gi|403307209|ref|XP_003944098.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 5 [Saimiri
            boliviensis boliviensis]
          Length = 1182

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 121/245 (49%), Gaps = 3/245 (1%)

Query: 170  SGRNFGDEGLFFLAESLGYNQ-TAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGN 228
            +G    DEG+  L E L  +Q T ++++    G+TA G ++    L +N +L  L LS N
Sbjct: 884  AGNEVTDEGVKALGEVLKVSQCTLQKLTLQDCGLTATGCQSLASALITNHSLTHLCLSNN 943

Query: 229  PIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMID 287
             +G+EGV  LC  L + + G++RL L+  +L   G   +A  L  N+ L  L L+ N ++
Sbjct: 944  NLGNEGVTLLCRSLRLPHCGLQRLMLNHCNLDTAGCGFLALTLLGNARLMHLSLSMNPLE 1003

Query: 288  YSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEG 346
             SG   L E + E S  +R L L      A    +LA  +  ++ LR L L  N++GD G
Sbjct: 1004 DSGVKLLCEVMREPSCHLRDLELVSCRLTAACCESLAYVIARSRYLRSLDLSENAVGDVG 1063

Query: 347  IRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEK 406
            + AL  GL  R+  L  L + +  +++     ++  +   + L  +NL  ND    G  K
Sbjct: 1064 VAALCEGLKQRRSVLRRLGLKSCGLTSGCCEELSLALSCNRQLASLNLVQNDFSPTGMRK 1123

Query: 407  IADAL 411
            +  A 
Sbjct: 1124 LCSAF 1128



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 138/307 (44%), Gaps = 4/307 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            R   S+ +   +  +E +    E+L + +   E +     G+T A       +L ++ +L
Sbjct: 819  RNLRSLSLGSAHLKEEDVRMACEALKHPRCMLESLRLDCCGLTLACYLKISKILTTSRSL 878

Query: 221  KTLNLSGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             +L+L+GN + DEGVK L ++L V    +++L L    L   G +++A  L  N  L  L
Sbjct: 879  SSLSLAGNEVTDEGVKALGEVLKVSQCTLQKLTLQDCGLTATGCQSLASALITNHSLTHL 938

Query: 280  ELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
             L+NN +   G T L  +L L +  ++ L LN       G   LA  L GN  L  L L 
Sbjct: 939  CLSNNNLGNEGVTLLCRSLRLPHCGLQRLMLNHCNLDTAGCGFLALTLLGNARLMHLSLS 998

Query: 339  GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
             N + D G++ L   +      L  L++ +  ++A     +A  I   + L  ++L  N 
Sbjct: 999  MNPLEDSGVKLLCEVMREPSCHLRDLELVSCRLTAACCESLAYVIARSRYLRSLDLSENA 1058

Query: 399  IGDEGAEKIADALKQNRTI-TTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
            +GD G   + + LKQ R++   + L    + S     ++  L  N  + SL+L  N    
Sbjct: 1059 VGDVGVAALCEGLKQRRSVLRRLGLKSCGLTSGCCEELSLALSCNRQLASLNLVQNDFSP 1118

Query: 458  DGAKALS 464
             G + L 
Sbjct: 1119 TGMRKLC 1125



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 159/389 (40%), Gaps = 35/389 (8%)

Query: 225  LSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNN 283
            + G  + DE  +  C +L  +  +++L L S  L +   K +   L+  +  ++ L L N
Sbjct: 742  MQGKTLIDEQWENFCSVLGTHPHLQQLDLGSSVLTERALKTLCAKLRPPACQIQKLRLRN 801

Query: 284  NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE-LHLH---- 338
              +   G   L   L+ N  +RSL L   +          + L+  + + E L L     
Sbjct: 802  TQMT-PGLQHLWRTLIANRNLRSLSLGSAHLKEEDVRMACEALKHPRCMLESLRLDCCGL 860

Query: 339  ------------------------GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
                                    GN + DEG++AL   L   +  L  L + +  ++A 
Sbjct: 861  TLACYLKISKILTTSRSLSSLSLAGNEVTDEGVKALGEVLKVSQCTLQKLTLQDCGLTAT 920

Query: 375  GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGAS 433
            G   +A  +    SL  + L  N++G+EG   +  +L+     +  + L   N+ + G  
Sbjct: 921  GCQSLASALITNHSLTHLCLSNNNLGNEGVTLLCRSLRLPHCGLQRLMLNHCNLDTAGCG 980

Query: 434  AIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLKLGWCQIGASGAEFVA 492
             +A  L  N+ +  L L+ NP+   G K L EV++    ++  L+L  C++ A+  E +A
Sbjct: 981  FLALTLLGNARLMHLSLSMNPLEDSGVKLLCEVMREPSCHLRDLELVSCRLTAACCESLA 1040

Query: 493  DMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
             ++  +  +  LDL  N + D G   L +  K     L  + L    +       ++ AL
Sbjct: 1041 YVIARSRYLRSLDLSENAVGDVGVAALCEGLKQRRSVLRRLGLKSCGLTSGCCEELSLAL 1100

Query: 553  KANEDVAVTSLNLANNFLTKFGQSALTDA 581
              N  +A  SLNL  N  +  G   L  A
Sbjct: 1101 SCNRQLA--SLNLVQNDFSPTGMRKLCSA 1127


>gi|428179886|gb|EKX48755.1| hypothetical protein GUITHDRAFT_68408 [Guillardia theta CCMP2712]
          Length = 295

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 130/288 (45%), Gaps = 47/288 (16%)

Query: 284 NMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
           N+I  +G  SL+  L  N+T+ SL L+ N     G  +LA GL  N SLR L L  N + 
Sbjct: 10  NIIGPAGMESLSNCLAVNTTLTSLKLDANSIALRGMRSLAPGLHLNTSLRSLDLSSNGLK 69

Query: 344 DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
           ++ I+ L   L+   G L  LD+  N IS                            DEG
Sbjct: 70  NKAIKLLSDTLA--VGGLTSLDLSRNQIS----------------------------DEG 99

Query: 404 AEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKAL 463
           A  +ADALK +  + ++ L  N+I   G  A+   LK N+ +TSL + +N +G+ G   L
Sbjct: 100 ANFLADALKGDNILQSLCLDFNDIEGPGGQALGLGLKSNTRLTSLSMCHNKLGSAGLSGL 159

Query: 464 SEVL--------KFHGN--------INTLKLGWCQIGASGAEFVADMLRYNNTISILDLR 507
           +E+         K  GN        +  LKL    I   GA  + + LR N T+  LDL 
Sbjct: 160 AEMFPIVAPSPTKAGGNDTEGSFCIMEILKLSNNSISNEGANLLFNRLRDNFTLKTLDLS 219

Query: 508 ANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
            N +    A+ +    +  N  LTS++L+ N++   G   I+  L+ N
Sbjct: 220 QNAISQHAAREIGSCLR-SNCCLTSLNLSMNKLHSLGVSMISSGLELN 266



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
             +S+D+S     DEG  FLA++L  +   + +    N I   G +A    L+SN  L +
Sbjct: 84  GLTSLDLSRNQISDEGANFLADALKGDNILQSLCLDFNDIEGPGGQALGLGLKSNTRLTS 143

Query: 223 LNLSGNPIGDEGVKCLCDILV------------DNAG----VERLQLSSVDLRDEGAKAI 266
           L++  N +G  G+  L ++              D  G    +E L+LS+  + +EGA  +
Sbjct: 144 LSMCHNKLGSAGLSGLAEMFPIVAPSPTKAGGNDTEGSFCIMEILKLSNNSISNEGANLL 203

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
              L++N  L+ L+L+ N I       +   L  N  + SL+L+ N   +LG + ++ GL
Sbjct: 204 FNRLRDNFTLKTLDLSQNAISQHAAREIGSCLRSNCCLTSLNLSMNKLHSLGVSMISSGL 263

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSS 356
           E N +L++L L   ++ DE +  L   L S
Sbjct: 264 ELNTTLKKLFLRDVNMKDECVGQLAVSLRS 293



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 32/195 (16%)

Query: 397 NDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIG 456
           N IG  G E +++ L  N T+T++ L  N+I  +G  ++A  L  N+ + SLDL+ N + 
Sbjct: 10  NIIGPAGMESLSNCLAVNTTLTSLKLDANSIALRGMRSLAPGLHLNTSLRSLDLSSNGLK 69

Query: 457 ADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
               K LS+ L   G                             ++ LDL  N + DEGA
Sbjct: 70  NKAIKLLSDTLAVGG-----------------------------LTSLDLSRNQISDEGA 100

Query: 517 KCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQS 576
             LA + K  N  L S+ L FN+I   G  A+   LK+N    +TSL++ +N L   G S
Sbjct: 101 NFLADALKGDN-ILQSLCLDFNDIEGPGGQALGLGLKSN--TRLTSLSMCHNKLGSAGLS 157

Query: 577 ALTDAKDLVYEMSEK 591
            L +   +V     K
Sbjct: 158 GLAEMFPIVAPSPTK 172


>gi|410971091|ref|XP_003992007.1| PREDICTED: leucine-rich repeat-containing protein 34 [Felis catus]
          Length = 589

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 117/249 (46%), Gaps = 33/249 (13%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+  N +S  GA++ A  ++    L+++NL  NDIG EG E IA AL +N T+  + + 
Sbjct: 253 LDVRYNLMSDVGAYYAARLLQKQHKLIYLNLMFNDIGPEGGELIAKALHKNTTLKYLRMT 312

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNI---------- 473
           GN I +KG    A +L+ NS +  LDL    +G     A + VL  +  I          
Sbjct: 313 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNQTIKGINLNRPIL 372

Query: 474 ------------NTLKLGWCQIGA---------SGAEFVADMLRYNNTISILDLRANGLR 512
                       + LK   C +            G + + D L  N ++  LD+  N + 
Sbjct: 373 YGEQEESTVHLGHMLKENHCLVALHVCKHNMKNCGIKQLCDALYLNRSLRYLDVSCNKIT 432

Query: 513 DEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTK 572
            +G  CLA   K  N  L  IDL+FN I D GA  +++ L A+ + ++ +L++ NN +  
Sbjct: 433 RDGMVCLADVLK-SNTTLEVIDLSFNRIEDVGAKYLSETL-ASHNRSLKALSVVNNNIKG 490

Query: 573 FGQSALTDA 581
            G  AL+ +
Sbjct: 491 EGLVALSQS 499



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 153/331 (46%), Gaps = 17/331 (5%)

Query: 260 DEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGA 319
           ++G + I   +  NS L  +E     I    F  L+  L +N  I  L +  N    +GA
Sbjct: 210 EKGLEGITLNIPGNSRLMPVE----RITGEDFWILSRILKKNPYINGLDVRYNLMSDVGA 265

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
              A+ L+    L  L+L  N IG EG   +   L  +   L  L +  N I  KG    
Sbjct: 266 YYAARLLQKQHKLIYLNLMFNDIGPEGGELIAKALH-KNTTLKYLRMTGNKIENKGGMFF 324

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA---IA 436
           A  ++   SL  ++L   D+G +     A  L QN+TI  I+L    ++ +   +   + 
Sbjct: 325 AAMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNQTIKGINLNRPILYGEQEESTVHLG 384

Query: 437 RVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLR 496
            +LK+N  + +L +  + +   G K L + L  + ++  L +   +I   G   +AD+L+
Sbjct: 385 HMLKENHCLVALHVCKHNMKNCGIKQLCDALYLNRSLRYLDVSCNKITRDGMVCLADVLK 444

Query: 497 YNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANE 556
            N T+ ++DL  N + D GAK L+++    N +L ++ +  N I+ +G  A++Q++K N 
Sbjct: 445 SNTTLEVIDLSFNRIEDVGAKYLSETLASHNRSLKALSVVNNNIKGEGLVALSQSMKTNP 504

Query: 557 DVAVTSLNLANNFL--TKFGQSALTDAKDLV 585
                   L+N ++   KF ++      DL+
Sbjct: 505 I-------LSNVYIWGNKFDEATCVAYSDLI 528



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 142/296 (47%), Gaps = 5/296 (1%)

Query: 177 EGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVK 236
           E  + L+  L  N     +    N ++  G      +LQ    L  LNL  N IG EG +
Sbjct: 235 EDFWILSRILKKNPYINGLDVRYNLMSDVGAYYAARLLQKQHKLIYLNLMFNDIGPEGGE 294

Query: 237 CLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAE 296
            +   L  N  ++ L+++   + ++G    A +L+ NS L  L+L +  +      + A 
Sbjct: 295 LIAKALHKNTTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFAT 354

Query: 297 ALLENSTIRSLHLNGN--YGGALGANA-LAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
            L +N TI+ ++LN    YG    +   L   L+ N  L  LH+  +++ + GI+ L   
Sbjct: 355 VLTQNQTIKGINLNRPILYGEQEESTVHLGHMLKENHCLVALHVCKHNMKNCGIKQLCDA 414

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADAL-K 412
           L   +  L  LD+  N I+  G   +A+ +K+  +L  I+L  N I D GA+ +++ L  
Sbjct: 415 LYLNR-SLRYLDVSCNKITRDGMVCLADVLKSNTTLEVIDLSFNRIEDVGAKYLSETLAS 473

Query: 413 QNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            NR++  + +  NNI  +G  A+++ +K N +++++ +  N        A S++++
Sbjct: 474 HNRSLKALSVVNNNIKGEGLVALSQSMKTNPILSNVYIWGNKFDEATCVAYSDLIQ 529



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 152/358 (42%), Gaps = 23/358 (6%)

Query: 126 EGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAES 185
           EG+  ++   + L+     ++  E    L+   K+    + +D+      D G ++ A  
Sbjct: 214 EGITLNIPGNSRLMP--VERITGEDFWILSRILKKNPYINGLDVRYNLMSDVGAYYAARL 271

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L        ++   N I   G +     L  N  LK L ++GN I ++G      +L  N
Sbjct: 272 LQKQHKLIYLNLMFNDIGPEGGELIAKALHKNTTLKYLRMTGNKIENKGGMFFAAMLQIN 331

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMI---DYSGFTSLAEALLENS 302
           + +E+L L   DL  +   A A +L  N  ++ + LN  ++          L   L EN 
Sbjct: 332 SSLEKLDLGDCDLGMQSVIAFATVLTQNQTIKGINLNRPILYGEQEESTVHLGHMLKENH 391

Query: 303 TIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLA 362
            + +LH+  +     G   L   L  N+SLR L +  N I  +G+  L   L S    L 
Sbjct: 392 CLVALHVCKHNMKNCGIKQLCDALYLNRSLRYLDVSCNKITRDGMVCLADVLKSNT-TLE 450

Query: 363 VLDIGNNSISAKGAFHVAEYI-KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
           V+D+  N I   GA +++E +  + +SL  +++  N+I  EG   ++ ++K N  ++ + 
Sbjct: 451 VIDLSFNRIEDVGAKYLSETLASHNRSLKALSVVNNNIKGEGLVALSQSMKTNPILSNVY 510

Query: 422 LGGNNIHSKGASAIA------RVLKDNSVITSLDLAYNPIGADGAKALSEV---LKFH 470
           + GN        A +      R+  DN+ +        P   DG   L+EV   LK H
Sbjct: 511 IWGNKFDEATCVAYSDLIQTGRLKPDNTDV-------EPFVVDGHVYLAEVSNGLKKH 561


>gi|399497988|emb|CCG20322.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFAKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMTGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNCISEEGVDELKEIFK 492



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFAKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMTGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNCISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFAKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMTGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 140/306 (45%), Gaps = 5/306 (1%)

Query: 139 LSGFT-GKLFRESKQTLNEFAKELRA--FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEV 195
           LS F  G+   E+   +N F++ L       +++S    G++G+   A+ L      EE+
Sbjct: 188 LSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFAKLLQSQTNLEEL 247

Query: 196 SFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSS 255
               +GI+     A   ++ S   LK L+   N  GDEG   + +I+  +  +E  + SS
Sbjct: 248 FLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSS 307

Query: 256 VDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGG 315
             +  EG   + E L   S L+ L+L +NM        L +AL ++  +  ++L+     
Sbjct: 308 TRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLE 367

Query: 316 ALGANALAKGLEGN-KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
             GA A+A  L+ +  SL  L + GN I  E   A+ S   + K  LA L +G N +  +
Sbjct: 368 DEGAIAIANALKDSAPSLAVLEMTGNDITAEAASAIASC-IAAKQLLAKLSLGENELKDE 426

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
           GA  +A+ ++    L+ +++  N +   GA  +A  +        +++ GN I  +G   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNCISEEGVDE 486

Query: 435 IARVLK 440
           +  + K
Sbjct: 487 LKEIFK 492



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMTGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNCISEEGVDELKEIFKKSPEML 498



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 6/232 (2%)

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDI-----GNNSISAKGAFHVAE 381
           E   S  ++     S G +  R     L++ K +L  +D+     G N   A    ++  
Sbjct: 149 EPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLSDFVAGRNEAEALDVMNIFS 208

Query: 382 YIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKD 441
                 +L ++NL  N +G++G    A  L+    +  + L  + I  + A+A++ ++  
Sbjct: 209 EALEGSNLKFLNLSDNALGEKGVRAFAKLLQSQTNLEELFLMNDGISQEAANAVSELVPS 268

Query: 442 NSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTI 501
              +  L    N  G +GA A++E++K    +   +    ++G+ G   + + L   + +
Sbjct: 269 TEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHL 328

Query: 502 SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALK 553
             LDLR N    E    L ++    +E LT I L++  + D+GA AIA ALK
Sbjct: 329 KKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLEDEGAIAIANALK 379


>gi|399497960|emb|CCG20308.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 123/529 (23%), Positives = 221/529 (41%), Gaps = 68/529 (12%)

Query: 34  PLSFAL-PFSGTRRCFRLKRLVVKAAARPEGGRRQRRVYRQSQSDNALTTAPVKQIASFV 92
           P S  L P S   R   ++R+    ++     R+ R + ++  + NA     V    +F 
Sbjct: 12  PFSIKLWPPSENTRKMLVERMTNNLSSPTIFTRKYRSLSKEEAAKNAEEIEDV----AFT 67

Query: 93  V--------PAGVFVSATFVLWKLVEKLL------MPKPSRPS------KPTAEGMNWSV 132
           +        P G   SA  +  +   KL+      MPKP           PT +   + +
Sbjct: 68  IANQHYEKEPDGDGSSAVQLYARECSKLILEILKKMPKPEDKEISISEVVPTVQETFFDI 127

Query: 133 GAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEG-------LFFLAES 185
             G      F G    E+++ L    +   ++S +  S R+FG +        L  L + 
Sbjct: 128 SKGKR---AFIGA--EEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQ 182

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L     ++ V+          +  F   L+ +  LK LNLS N +G++GV+     L   
Sbjct: 183 LKEVDLSDFVAGRHEAEALDVMNIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQ 241

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             +E L L +  +  E A A++EL+ +   L+VL  +NNM    G  ++AE +  +  + 
Sbjct: 242 TNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLE 301

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
               +    G+ G + L + L     L++L L  N  G E    L   LS          
Sbjct: 302 DFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS---------- 351

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQN-RTITTIDLGG 424
                              N ++L  I L   ++ DEGA  IA+ALK +  ++  +++ G
Sbjct: 352 -------------------NHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAG 392

Query: 425 NNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIG 484
           N+I ++ ASAIA  +    ++  L L  N +  +GA  +++ L+ H ++  + +    + 
Sbjct: 393 NDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALR 452

Query: 485 ASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSI 533
            +GA  +A  + + +   +L++  N + +EG   L + FK   E L S+
Sbjct: 453 RAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEMLASL 501



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASC-IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459


>gi|399498048|emb|CCG20352.1| Ran GTPase activating protein 2 [Solanum tarijense]
          Length = 553

 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 137/274 (50%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      +AVL++  N I+ +
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSVAVLEMAGNDITVE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +I+ AL+++R +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQISKALERHRHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 145/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I  + ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSVAVLEMAGNDITVEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +S+ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQISKALERHRHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  I++AL+ +   
Sbjct: 383 PSVAVLEMAGNDITVEAASAIASC-IAAKQLLAKLSLGENELKDEGAIQISKALERHRH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 7/223 (3%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAFAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
               +   +    ++G+ G   + + L   + +  LDLR N    E    L ++    +E
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHE 354

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            LT I L++  + D+GA AIA ALK +   +V  L +A N +T
Sbjct: 355 NLTEIYLSYLNLEDEGAIAIANALK-DSAPSVAVLEMAGNDIT 396


>gi|399497942|emb|CCG20299.1| Ran GTPase activating protein 2 [Solanum cardiophyllum]
          Length = 553

 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELEDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELEDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNLISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE+ D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELEDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELEDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNLISEEGVDELKEIFKKSPEML 498



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 118/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AIA ALK +   ++  L +A N +T
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|399497940|emb|CCG20298.1| Ran GTPase activating protein 2 [Solanum chacoense]
          Length = 553

 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 7/223 (3%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
               +   +    ++G+ G   + + L   + +  LDLR N    E    L ++    +E
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHE 354

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            LT I L++  + D+GA AIA ALK +   ++  L +A N +T
Sbjct: 355 NLTEIYLSYLNLEDEGAIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|95108203|emb|CAD17823.3| lrr-gala family type III effector protein (gala 2) [Ralstonia
           solanacearum GMI1000]
          Length = 1035

 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 130/416 (31%), Positives = 199/416 (47%), Gaps = 64/416 (15%)

Query: 139 LSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           LSG TG    E+   L   A+     +S+D+S    G+ G   LA S     +   ++ +
Sbjct: 638 LSGCTGSAVSEAG--LAYLAR--LPLASLDLSDTGIGNRGAQALAAS----ASLTSLNLS 689

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            NGI  AG +A    L  N  L  L++S NPI + G + L       AG     L+S++L
Sbjct: 690 GNGIGTAGAEA----LGRNTVLTALDISANPIRNAGAQAL-------AGSR--SLTSLEL 736

Query: 259 RDEGAK-AIAELLKNNSILRVLELN-NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGA 316
           RD G +    E L  N++LR L+++ N++ D S     A AL  N T+ SL  NG     
Sbjct: 737 RDTGIEDGGIEALAANTVLRSLDISGNDLSDQS-----AAALAANRTLTSLKANG----- 786

Query: 317 LG-ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKG 375
            G  N +A+ L   +SLR L +  NSIGD G+  +     +R   L  L++  N I+ +G
Sbjct: 787 CGLTNDMAQQLARIRSLRTLEVGSNSIGDAGVLTI-----ARNASLRSLNLSRNPITPQG 841

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
            + +A   +  KSL   ++     GD GA      L  NR +T++ LG N + S+G    
Sbjct: 842 LYPLA-LSRTLKSL---DVSRIGCGDRGALL----LSGNRALTSLKLGFNRVSSEG---- 889

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           AR L  N  + SLDL  N I    A+AL+        + +L +  C++     + VA  L
Sbjct: 890 ARRLAANRTLVSLDLRGNTIDVAAARALANAEP----LASLNVSDCRLD----DAVACAL 941

Query: 496 RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQA 551
             + T++ LD+  N L    A+ LA      N  L S+ ++ N+I  +GA A+A +
Sbjct: 942 AESRTLTSLDVSWNRLSHRAARALAN-----NPVLASLYISHNDIGPEGAQALADS 992



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 136/284 (47%), Gaps = 55/284 (19%)

Query: 248 VERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSL 307
           +E L ++  ++ D GA+    LL  N  L+ L   +  I  SG    A  L E+ T+ SL
Sbjct: 154 LESLNVAGAEIGDGGAR----LLAANPSLKSLNAASGGISASG----ARMLAESPTLESL 205

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L  N  G  GA ALA    G++SLR L +    + D G RAL     +    L  LD+G
Sbjct: 206 DLTQNAIGDAGAQALA----GSRSLRHLAVRNGLVTDLGTRAL-----ALNPALVSLDLG 256

Query: 368 N------------------NSISAKGAFHVAEYIKNCKSLLWINLYMNDI-GDEGAEKIA 408
           N                  N+I+A+GA+ +A+     +SL  +++  ND+ GD+G     
Sbjct: 257 NLVTETGNQVEQDGYDKTANNITAQGAWALAQN----RSLKSLSVQGNDLCGDDGVR--- 309

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
            AL +NRT+T++++   N+     SA A+ L DN V+TSL + +N  G D A A+   L 
Sbjct: 310 -ALARNRTLTSLNVAFTNM----TSASAKALADNPVLTSLSVRWN-YGLDDAGAME--LA 361

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLR 512
              ++ +L      + A GA  +A     N  IS+    AN +R
Sbjct: 362 MSRSLTSLDARDTGMSARGALALA----ANARISVWHDHANPVR 401



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 159/408 (38%), Gaps = 132/408 (32%)

Query: 286 IDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA--------------KGLEGNK- 330
           + + G  SLA+      ++R L L+G  G A+    LA               G+ GN+ 
Sbjct: 615 LSFHGPLSLADLRALPPSVRHLDLSGCTGSAVSEAGLAYLARLPLASLDLSDTGI-GNRG 673

Query: 331 --------SLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA-- 380
                   SL  L+L GN IG  G  AL      R   L  LDI  N I   GA  +A  
Sbjct: 674 AQALAASASLTSLNLSGNGIGTAGAEAL-----GRNTVLTALDISANPIRNAGAQALAGS 728

Query: 381 ------------------EYIKNCKSLLWINLYMNDIGDEGAEKIA-----DALKQN--- 414
                             E +     L  +++  ND+ D+ A  +A      +LK N   
Sbjct: 729 RSLTSLELRDTGIEDGGIEALAANTVLRSLDISGNDLSDQSAAALAANRTLTSLKANGCG 788

Query: 415 ------------RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG--A 460
                       R++ T+++G N+I   G   IAR    N+ + SL+L+ NPI   G   
Sbjct: 789 LTNDMAQQLARIRSLRTLEVGSNSIGDAGVLTIAR----NASLRSLNLSRNPITPQGLYP 844

Query: 461 KALSEVLK----------------FHGN--INTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            ALS  LK                  GN  + +LKLG+ ++ + GA  +A     N T+ 
Sbjct: 845 LALSRTLKSLDVSRIGCGDRGALLLSGNRALTSLKLGFNRVSSEGARRLA----ANRTLV 900

Query: 503 ILDLRANGLR-----------------------DEGAKC-LAQSFKVVNEALTSIDLAFN 538
            LDLR N +                        D+   C LA+S       LTS+D+++N
Sbjct: 901 SLDLRGNTIDVAAARALANAEPLASLNVSDCRLDDAVACALAES-----RTLTSLDVSWN 955

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDAKDLVY 586
            +    A A+A       +  + SL +++N +   G  AL D+  L +
Sbjct: 956 RLSHRAARALAN------NPVLASLYISHNDIGPEGAQALADSASLTF 997



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 42/268 (15%)

Query: 325 GLEGNKSLRELHLHGN-SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
           GL  +  L  +HL G+ ++ D  ++AL + L         LD+   + SAK +F    Y+
Sbjct: 100 GLRDHPHLESVHLKGDFTLAD--LKALPTTLRH-------LDLSECTGSAK-SFRAIAYL 149

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNS 443
                L  +N+   +IGD GA  +A     N ++ +++     I + GA    R+L ++ 
Sbjct: 150 AGLP-LESLNVAGAEIGDGGARLLA----ANPSLKSLNAASGGISASGA----RMLAESP 200

Query: 444 VITSLDLAYNPIGADGAKAL--SEVLKFHGNINTL--KLGWCQIGASGAEFVADM----L 495
            + SLDL  N IG  GA+AL  S  L+     N L   LG   +  + A    D+     
Sbjct: 201 TLESLDLTQNAIGDAGAQALAGSRSLRHLAVRNGLVTDLGTRALALNPALVSLDLGNLVT 260

Query: 496 RYNNTISI--LDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI-RDDGAFAIAQAL 552
              N +     D  AN +  +GA  LAQ     N +L S+ +  N++  DDG  A+A+  
Sbjct: 261 ETGNQVEQDGYDKTANNITAQGAWALAQ-----NRSLKSLSVQGNDLCGDDGVRALAR-- 313

Query: 553 KANEDVAVTSLNLANNFLTKFGQSALTD 580
               +  +TSLN+A   +T     AL D
Sbjct: 314 ----NRTLTSLNVAFTNMTSASAKALAD 337



 Score = 45.4 bits (106), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 118/271 (43%), Gaps = 49/271 (18%)

Query: 302 STIRSLHLNGNYGGALGANALA--KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKG 359
           +T+R L L+   G A    A+A   GL     L  L++ G  IGD G R L +  S    
Sbjct: 126 TTLRHLDLSECTGSAKSFRAIAYLAGLP----LESLNVAGAEIGDGGARLLAANPS---- 177

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
            L  L+  +  ISA GA  +AE      +L  ++L  N IGD GA+    AL  +R++  
Sbjct: 178 -LKSLNAASGGISASGARMLAE----SPTLESLDLTQNAIGDAGAQ----ALAGSRSLRH 228

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           + +    +   G     R L  N  + SLDL  N +   G +   +      N  T +  
Sbjct: 229 LAVRNGLVTDLGT----RALALNPALVSLDLG-NLVTETGNQVEQDGYDKTANNITAQGA 283

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGL-RDEGAKCLAQSFKVVNEALTSIDLAFN 538
           W              L  N ++  L ++ N L  D+G + LA+     N  LTS+++AF 
Sbjct: 284 WA-------------LAQNRSLKSLSVQGNDLCGDDGVRALAR-----NRTLTSLNVAFT 325

Query: 539 EIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
            +    A A+A      ++  +TSL++  N+
Sbjct: 326 NMTSASAKALA------DNPVLTSLSVRWNY 350


>gi|296227603|ref|XP_002807697.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 34 [Callithrix jacchus]
          Length = 468

 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 116/221 (52%), Gaps = 6/221 (2%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+G N IS  GA++ A+ ++    L ++NL  NDIG EG E IA AL +N+T+  + + 
Sbjct: 132 LDVGYNLISDVGAYYAAKLLQKQLYLTYLNLMFNDIGPEGGELIAKALHKNQTLKYLRMT 191

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I + G    A +L+ NS +  LDL    +G     A++ VL  +  I  + L    +
Sbjct: 192 GNKIENTGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAIATVLTRNQAIKAINLNRPIL 251

Query: 484 GASGAE---FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
                E    V  ML+ N+ +  L +  + +++ G + L  +   +N +L  +D++ N+I
Sbjct: 252 YGEQEESTVHVGRMLKENHCLVALHMCKHDMKNSGIQQLCDAL-YLNSSLRYLDVSCNKI 310

Query: 541 RDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
             DG   +A  LK+N  + V  ++L+ N +   G + L++A
Sbjct: 311 THDGMVYVADVLKSNTTLEV--IDLSFNRIENAGANYLSEA 349



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 27/290 (9%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L+   K  R  + +D+      D G ++ A+ L        ++   N I   G +     
Sbjct: 119 LSRILKNCRYINGLDVGYNLISDVGAYYAAKLLQKQLYLTYLNLMFNDIGPEGGELIAKA 178

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  LK L ++GN I + G      +L  N+ +E+L L   DL  +   AIA +L  N
Sbjct: 179 LHKNQTLKYLRMTGNKIENTGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAIATVLTRN 238

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             ++ + LN  ++         E   E ST+                 + + L+ N  L 
Sbjct: 239 QAIKAINLNRPIL-------YGEQ--EESTVH----------------VGRMLKENHCLV 273

Query: 334 ELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
            LH+  + + + GI+ L   L      L  LD+  N I+  G  +VA+ +K+  +L  I+
Sbjct: 274 ALHMCKHDMKNSGIQQLCDAL-YLNSSLRYLDVSCNKITHDGMVYVADVLKSNTTLEVID 332

Query: 394 LYMNDIGDEGAEKIADAL-KQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           L  N I + GA  +++AL   NR++  + +  NNI  +G  A+++ +K N
Sbjct: 333 LSFNRIENAGANYLSEALTSHNRSLKALSVVSNNIEGEGLVALSQSMKTN 382



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 97/195 (49%), Gaps = 7/195 (3%)

Query: 157 FAKELRAFSSV---DMSGRNFGDEGLFFLAESLGYNQTAEEVSF---AANGITAAGIKAF 210
           FA  L+  SS+   D+   + G + +  +A  L  NQ  + ++       G         
Sbjct: 203 FAAMLQINSSLEKLDLGDCDLGMQSVIAIATVLTRNQAIKAINLNRPILYGEQEESTVHV 262

Query: 211 DGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELL 270
             +L+ N  L  L++  + + + G++ LCD L  N+ +  L +S   +  +G   +A++L
Sbjct: 263 GRMLKENHCLVALHMCKHDMKNSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYVADVL 322

Query: 271 KNNSILRVLELNNNMIDYSGFTSLAEALL-ENSTIRSLHLNGNYGGALGANALAKGLEGN 329
           K+N+ L V++L+ N I+ +G   L+EAL   N ++++L +  N     G  AL++ ++ N
Sbjct: 323 KSNTTLEVIDLSFNRIENAGANYLSEALTSHNRSLKALSVVSNNIEGEGLVALSQSMKTN 382

Query: 330 KSLRELHLHGNSIGD 344
            +   +++ GN   +
Sbjct: 383 LTFSHIYIWGNKFDE 397


>gi|118374053|ref|XP_001020218.1| Protein kinase domain containing protein [Tetrahymena thermophila]
 gi|89301985|gb|EAR99973.1| Protein kinase domain containing protein [Tetrahymena thermophila
            SB210]
          Length = 1218

 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 203/428 (47%), Gaps = 26/428 (6%)

Query: 166  SVDMSGRNFGDEGLFFLAESLGY--NQTAEEVSFAANGITAAGIK--AFDGVLQSNIALK 221
            ++D+   + GDEG   +   +    N T+  +    N I   G K  A   VL  NI   
Sbjct: 770  TLDLRSSSIGDEGAKNIRTGIEQCKNLTSLTLDLRNNSIGDEGAKNLAMAIVLCKNITNL 829

Query: 222  TLNLSGNPIGDEGVKCLCD--ILVDNAGVERLQLSSVDLRDEGAKAIAE---LLKNNSIL 276
             LNLS N IGDEG K L    +L  N     L LS+  + DEGAK + +     K  + L
Sbjct: 830  NLNLSTNQIGDEGAKDLGQGIVLFKNITNLNLNLSTNQIGDEGAKDLGKGIAYCKYITNL 889

Query: 277  RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLN--GNYGGALGANALAKGLEGNKSLRE 334
            + L+L+ N I   G   L   + +   I SL L+   N  GA GA  L   +   K++  
Sbjct: 890  K-LDLSANGIGEYGVKDLGTGIAQCKNITSLTLDLSANSIGAYGAKDLGTEIAQCKNITS 948

Query: 335  LH--LHGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAEYIKNCKSL-- 389
            L   L  N+IG +G + L +G++  K   ++ LD+  NSI A+GA  +   I  CK++  
Sbjct: 949  LTLGLRINNIGAQGAQDLGTGIAQCKNITSLTLDLCTNSIGAQGAKDLGTGIAQCKNITS 1008

Query: 390  LWINLYMNDIGDEGAEKIADALKQNRTITT--IDLGGNNIHSKGASAIARVLKDNSVITS 447
            L + L  N I + GA+ +   + Q + IT+  +DL  N+I   GA  +   +     ITS
Sbjct: 1009 LTLKLVENSIDEYGAKDLGMGIAQCKNITSLILDLSTNSIGEYGAKYLGIGIAQCKNITS 1068

Query: 448  L--DLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ--IGASGAEFVAD-MLRYNNTIS 502
            L  +L+ N IG  GAK L   +    NI +L L   +  IGA G + +   + +  N  S
Sbjct: 1069 LAINLSKNSIGEYGAKDLGTGIAQCKNITSLTLDLSENSIGAQGVKDLGTGIAQCKNITS 1128

Query: 503  I-LDLRANGLRDEGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAV 560
            + L L  N +  +GAK LA +  +  N A  ++DL  N I   GA  +   +   +++  
Sbjct: 1129 LTLYLSKNSIGAQGAKDLATAIAQCKNIASLTLDLIENSIGAQGAKDLGTGITQCKNITS 1188

Query: 561  TSLNLANN 568
             +L+L  N
Sbjct: 1189 LTLDLREN 1196



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 187/378 (49%), Gaps = 32/378 (8%)

Query: 217  NIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQ-LSS--VDLR-----DEGAK--AI 266
            NI   TL+L  + IGDEG K +        G+E+ + L+S  +DLR     DEGAK  A+
Sbjct: 765  NIISLTLDLRSSSIGDEGAKNI------RTGIEQCKNLTSLTLDLRNNSIGDEGAKNLAM 818

Query: 267  AELLKNNSILRVLELNNNMIDYSGFTSLAE--ALLENSTIRSLHLNGNYGGALGANALAK 324
            A +L  N     L L+ N I   G   L +   L +N T  +L+L+ N  G  GA  L K
Sbjct: 819  AIVLCKNITNLNLNLSTNQIGDEGAKDLGQGIVLFKNITNLNLNLSTNQIGDEGAKDLGK 878

Query: 325  GLEGNKSLR--ELHLHGNSIGDEGIRALMSGLSSRKGKLAV-LDIGNNSISAKGAFHVAE 381
            G+   K +   +L L  N IG+ G++ L +G++  K   ++ LD+  NSI A GA  +  
Sbjct: 879  GIAYCKYITNLKLDLSANGIGEYGVKDLGTGIAQCKNITSLTLDLSANSIGAYGAKDLGT 938

Query: 382  YIKNCKSL--LWINLYMNDIGDEGAEKIADALKQNRTIT--TIDLGGNNIHSKGASAIAR 437
             I  CK++  L + L +N+IG +GA+ +   + Q + IT  T+DL  N+I ++GA  +  
Sbjct: 939  EIAQCKNITSLTLGLRINNIGAQGAQDLGTGIAQCKNITSLTLDLCTNSIGAQGAKDLGT 998

Query: 438  VLKDNSVITS--LDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC--QIGASGAEFVA- 492
             +     ITS  L L  N I   GAK L   +    NI +L L      IG  GA+++  
Sbjct: 999  GIAQCKNITSLTLKLVENSIDEYGAKDLGMGIAQCKNITSLILDLSTNSIGEYGAKYLGI 1058

Query: 493  DMLRYNNTISI-LDLRANGLRDEGAKCLAQSF-KVVNEALTSIDLAFNEIRDDGAFAIAQ 550
             + +  N  S+ ++L  N + + GAK L     +  N    ++DL+ N I   G   +  
Sbjct: 1059 GIAQCKNITSLAINLSKNSIGEYGAKDLGTGIAQCKNITSLTLDLSENSIGAQGVKDLGT 1118

Query: 551  ALKANEDVAVTSLNLANN 568
             +   +++   +L L+ N
Sbjct: 1119 GIAQCKNITSLTLYLSKN 1136


>gi|410973143|ref|XP_003993015.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14 [Felis
           catus]
          Length = 1093

 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 145/318 (45%), Gaps = 30/318 (9%)

Query: 266 IAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKG 325
           +  +L  N  LR L+L ++ ++     +  + L   S      L        G   +A  
Sbjct: 665 LCSVLHTNEHLRELDLCHSNLNELAMKTFYQELRHPSCKLQKLLMRFLSFPDGCRDIASS 724

Query: 326 LEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKN 385
           L  N++L  L L G+ +GD G+++L   L + + KL  L + +  ++     ++++ +  
Sbjct: 725 LTHNQNLMHLDLKGSDVGDNGVKSLCEALKNPECKLQNLSLESCDLTTVCCLNISKALLR 784

Query: 386 CKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSV 444
            +SL+++NL  N + D+G + + +AL   +  +  + L    +   G   ++  L  N  
Sbjct: 785 SRSLVFLNLSTNHLLDDGVKLLCEALGHPKCHLERLSLESCGLTVAGCEDLSLALISNKR 844

Query: 445 ITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADMLRYNNTISI 503
           +T L LA N +G DG K +S+ LK    N+ +L L  C   +   + ++  L  N +++ 
Sbjct: 845 LTHLCLADNILGDDGVKLVSDALKHPQCNLQSLVLRRCHFTSLSGQHLSSSLLRNKSLTH 904

Query: 504 LDLRANGLRDEGAKCLAQSFK----------------------------VVNEALTSIDL 535
           LDL +N L+D+G K L   F+                            + N  L S+DL
Sbjct: 905 LDLGSNWLQDDGVKLLCDVFRHPSCNLQDLGLMGCALTSMCCLDLASAILNNPHLQSLDL 964

Query: 536 AFNEIRDDGAFAIAQALK 553
             N+++DDG   + +AL+
Sbjct: 965 GNNDLQDDGVKILYEALR 982



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 140/315 (44%), Gaps = 6/315 (1%)

Query: 206  GIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAK 264
            G +     L  N  L  L+L G+ +GD GVK LC+ L +    ++ L L S DL      
Sbjct: 717  GCRDIASSLTHNQNLMHLDLKGSDVGDNGVKSLCEALKNPECKLQNLSLESCDLTTVCCL 776

Query: 265  AIAELLKNNSILRVLELNNNMIDYSGFTSLAEAL-LENSTIRSLHLNGNYGGALGANALA 323
             I++ L  +  L  L L+ N +   G   L EAL      +  L L        G   L+
Sbjct: 777  NISKALLRSRSLVFLNLSTNHLLDDGVKLLCEALGHPKCHLERLSLESCGLTVAGCEDLS 836

Query: 324  KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
              L  NK L  L L  N +GD+G++ +   L   +  L  L +     ++    H++  +
Sbjct: 837  LALISNKRLTHLCLADNILGDDGVKLVSDALKHPQCNLQSLVLRRCHFTSLSGQHLSSSL 896

Query: 384  KNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDN 442
               KSL  ++L  N + D+G + + D  +     +  + L G  + S     +A  + +N
Sbjct: 897  LRNKSLTHLDLGSNWLQDDGVKLLCDVFRHPSCNLQDLGLMGCALTSMCCLDLASAILNN 956

Query: 443  SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG--WCQIGASGAEFVADMLRYNNT 500
              + SLDL  N +  DG K L E L+ H N N  +LG  +C + +   + ++  LR N  
Sbjct: 957  PHLQSLDLGNNDLQDDGVKILYEALR-HPNCNIQRLGLEYCGLTSLCCQDLSSTLRRNQN 1015

Query: 501  ISILDLRANGLRDEG 515
            +  ++L  N L  EG
Sbjct: 1016 LIKINLTQNTLGYEG 1030



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 143/306 (46%), Gaps = 4/306 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D+ G + GD G+  L E+L   +   + +S  +  +T          L  + +L  LNL
Sbjct: 734  LDLKGSDVGDNGVKSLCEALKNPECKLQNLSLESCDLTTVCCLNISKALLRSRSLVFLNL 793

Query: 226  SGNPIGDEGVKCLCDIL-VDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N + D+GVK LC+ L      +ERL L S  L   G + ++  L +N  L  L L +N
Sbjct: 794  STNHLLDDGVKLLCEALGHPKCHLERLSLESCGLTVAGCEDLSLALISNKRLTHLCLADN 853

Query: 285  MIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            ++   G   +++AL      ++SL L   +  +L    L+  L  NKSL  L L  N + 
Sbjct: 854  ILGDDGVKLVSDALKHPQCNLQSLVLRRCHFTSLSGQHLSSSLLRNKSLTHLDLGSNWLQ 913

Query: 344  DEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEG 403
            D+G++ L          L  L +   ++++     +A  I N   L  ++L  ND+ D+G
Sbjct: 914  DDGVKLLCDVFRHPSCNLQDLGLMGCALTSMCCLDLASAILNNPHLQSLDLGNNDLQDDG 973

Query: 404  AEKIADALKQ-NRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKA 462
             + + +AL+  N  I  + L    + S     ++  L+ N  +  ++L  N +G +G   
Sbjct: 974  VKILYEALRHPNCNIQRLGLEYCGLTSLCCQDLSSTLRRNQNLIKINLTQNTLGYEGIMK 1033

Query: 463  LSEVLK 468
            L EVL+
Sbjct: 1034 LCEVLR 1039



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 171/369 (46%), Gaps = 19/369 (5%)

Query: 212  GVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELL 270
             VL +N  L+ L+L  + + +  +K     L   +  +++L +  +   D G + IA  L
Sbjct: 667  SVLHTNEHLRELDLCHSNLNELAMKTFYQELRHPSCKLQKLLMRFLSFPD-GCRDIASSL 725

Query: 271  KNNSILRVLELNNNMIDYSGFTSLAEAL------LENSTIRSLHLNGNYGGALGANALAK 324
             +N  L  L+L  + +  +G  SL EAL      L+N ++ S  L       +    ++K
Sbjct: 726  THNQNLMHLDLKGSDVGDNGVKSLCEALKNPECKLQNLSLESCDLT-----TVCCLNISK 780

Query: 325  GLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIK 384
             L  ++SL  L+L  N + D+G++ L   L   K  L  L + +  ++  G   ++  + 
Sbjct: 781  ALLRSRSLVFLNLSTNHLLDDGVKLLCEALGHPKCHLERLSLESCGLTVAGCEDLSLALI 840

Query: 385  NCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNS 443
            + K L  + L  N +GD+G + ++DALK  +  + ++ L   +  S     ++  L  N 
Sbjct: 841  SNKRLTHLCLADNILGDDGVKLVSDALKHPQCNLQSLVLRRCHFTSLSGQHLSSSLLRNK 900

Query: 444  VITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW--CQIGASGAEFVADMLRYNNTI 501
             +T LDL  N +  DG K L +V + H + N   LG   C + +     +A  +  N  +
Sbjct: 901  SLTHLDLGSNWLQDDGVKLLCDVFR-HPSCNLQDLGLMGCALTSMCCLDLASAILNNPHL 959

Query: 502  SILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVT 561
              LDL  N L+D+G K L ++ +  N  +  + L +  +       ++  L+ N++  + 
Sbjct: 960  QSLDLGNNDLQDDGVKILYEALRHPNCNIQRLGLEYCGLTSLCCQDLSSTLRRNQN--LI 1017

Query: 562  SLNLANNFL 570
             +NL  N L
Sbjct: 1018 KINLTQNTL 1026


>gi|399497938|emb|CCG20297.1| Ran GTPase activating protein 2 [Solanum chacoense]
 gi|399498100|emb|CCG20378.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 7/223 (3%)

Query: 354 LSSRKGKLAVLDI-----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIA 408
           L++ K +L  +D+     G N   A    ++        +L ++NL  N +G++G     
Sbjct: 176 LAALKDQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFG 235

Query: 409 DALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
             L+    +  + L  + I  + A+A++ ++     +  L    N  G +GA A++E++K
Sbjct: 236 KLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVK 295

Query: 469 FHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNE 528
               +   +    ++G+ G   + + L   + +  LDLR N    E    L ++    +E
Sbjct: 296 RSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHE 354

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLT 571
            LT I L++  + D+GA AIA ALK +   ++  L +A N +T
Sbjct: 355 NLTEIYLSYLNLEDEGAIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|380007855|gb|AFD29894.1| nucleotide-binding oligomerization domain 1 protein [Paralichthys
           olivaceus]
 gi|380007857|gb|AFD29895.1| nucleotide-binding oligomerization domain 1 protein [Paralichthys
           olivaceus]
          Length = 939

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 5/230 (2%)

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           NNN+ DY G   L  +  + + +R   L  N         LA+ L  +K +  L L+ N 
Sbjct: 698 NNNISDY-GVKQLRPSFCKITVVR---LCVNQLSDSSIEVLAEELCKHKVVEVLGLYNNH 753

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
           I D G + L++ +     KL V+ IG N I++ G  ++A  I+   S+  + ++ N IGD
Sbjct: 754 ITDVGAK-LVAQIIEECPKLRVVKIGKNKITSVGGRYLASAIQKSSSIFDVGMWGNSIGD 812

Query: 402 EGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAK 461
           EGAE  A+AL+ +  +T + L  N I SKG   ++  LK+NS +    L  N +  D A 
Sbjct: 813 EGAEAFAEALRNHPKLTNLSLSANGITSKGGKLLSEALKENSTLRIFWLVQNELTDDAAP 872

Query: 462 ALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGL 511
             +E++K +  +  L L   Q    G + +A+ L +N+ +  + ++ N L
Sbjct: 873 HFAELVKVNTGLTHLWLINNQFSVHGIKHLAEALTHNSALKEICVKGNQL 922



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 24/267 (8%)

Query: 198 AANGITAAGIK------------AFDGVLQSNIALKTLNLSGNPIGDEGVKCL----CDI 241
            A GITA+ IK            A + VLQ    L  +++  N I D GVK L    C I
Sbjct: 657 TAKGITASLIKLGYCNIYSGDCAALNFVLQHRQRLLGVDMDNNNISDYGVKQLRPSFCKI 716

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
            V    V +L  SS+++       +AE L  + ++ VL L NN I   G   +A+ + E 
Sbjct: 717 TVVRLCVNQLSDSSIEV-------LAEELCKHKVVEVLGLYNNHITDVGAKLVAQIIEEC 769

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
             +R + +  N   ++G   LA  ++ + S+ ++ + GNSIGDEG  A    L +   KL
Sbjct: 770 PKLRVVKIGKNKITSVGGRYLASAIQKSSSIFDVGMWGNSIGDEGAEAFAEALRNHP-KL 828

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
             L +  N I++KG   ++E +K   +L    L  N++ D+ A   A+ +K N  +T + 
Sbjct: 829 TNLSLSANGITSKGGKLLSEALKENSTLRIFWLVQNELTDDAAPHFAELVKVNTGLTHLW 888

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSL 448
           L  N     G   +A  L  NS +  +
Sbjct: 889 LINNQFSVHGIKHLAEALTHNSALKEI 915



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 115/235 (48%), Gaps = 5/235 (2%)

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
           AL   L+  + L  + +  N+I D G++ L         K+ V+ +  N +S      +A
Sbjct: 680 ALNFVLQHRQRLLGVDMDNNNISDYGVKQLRPSFC----KITVVRLCVNQLSDSSIEVLA 735

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
           E +   K +  + LY N I D GA+ +A  +++   +  + +G N I S G   +A  ++
Sbjct: 736 EELCKHKVVEVLGLYNNHITDVGAKLVAQIIEECPKLRVVKIGKNKITSVGGRYLASAIQ 795

Query: 441 DNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNT 500
            +S I  + +  N IG +GA+A +E L+ H  +  L L    I + G + +++ L+ N+T
Sbjct: 796 KSSSIFDVGMWGNSIGDEGAEAFAEALRNHPKLTNLSLSANGITSKGGKLLSEALKENST 855

Query: 501 ISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
           + I  L  N L D+ A   A+  K VN  LT + L  N+    G   +A+AL  N
Sbjct: 856 LRIFWLVQNELTDDAAPHFAELVK-VNTGLTHLWLINNQFSVHGIKHLAEALTHN 909



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 4/242 (1%)

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           L + Q    V    N I+  G+K       S   +  + L  N + D  ++ L + L  +
Sbjct: 685 LQHRQRLLGVDMDNNNISDYGVKQLRP---SFCKITVVRLCVNQLSDSSIEVLAEELCKH 741

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIR 305
             VE L L +  + D GAK +A++++    LRV+++  N I   G   LA A+ ++S+I 
Sbjct: 742 KVVEVLGLYNNHITDVGAKLVAQIIEECPKLRVVKIGKNKITSVGGRYLASAIQKSSSIF 801

Query: 306 SLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLD 365
            + + GN  G  GA A A+ L  +  L  L L  N I  +G + L   L      L +  
Sbjct: 802 DVGMWGNSIGDEGAEAFAEALRNHPKLTNLSLSANGITSKGGKLLSEAL-KENSTLRIFW 860

Query: 366 IGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGN 425
           +  N ++   A H AE +K    L  + L  N     G + +A+AL  N  +  I + GN
Sbjct: 861 LVQNELTDDAAPHFAELVKVNTGLTHLWLINNQFSVHGIKHLAEALTHNSALKEICVKGN 920

Query: 426 NI 427
            +
Sbjct: 921 QL 922



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 2/201 (0%)

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N + D  I  L   L   K  + VL + NN I+  GA  VA+ I+ C  L  + +  N I
Sbjct: 724 NQLSDSSIEVLAEELCKHKV-VEVLGLYNNHITDVGAKLVAQIIEECPKLRVVKIGKNKI 782

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
              G   +A A++++ +I  + + GN+I  +GA A A  L+++  +T+L L+ N I + G
Sbjct: 783 TSVGGRYLASAIQKSSSIFDVGMWGNSIGDEGAEAFAEALRNHPKLTNLSLSANGITSKG 842

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
            K LSE LK +  +    L   ++    A   A++++ N  ++ L L  N     G K L
Sbjct: 843 GKLLSEALKENSTLRIFWLVQNELTDDAAPHFAELVKVNTGLTHLWLINNQFSVHGIKHL 902

Query: 520 AQSFKVVNEALTSIDLAFNEI 540
           A++    N AL  I +  N++
Sbjct: 903 AEAL-THNSALKEICVKGNQL 922



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 3/206 (1%)

Query: 150 SKQTLNEFAKELRAFSSVDMSG---RNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAG 206
           S  ++   A+EL     V++ G    +  D G   +A+ +        V    N IT+ G
Sbjct: 727 SDSSIEVLAEELCKHKVVEVLGLYNNHITDVGAKLVAQIIEECPKLRVVKIGKNKITSVG 786

Query: 207 IKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAI 266
            +     +Q + ++  + + GN IGDEG +   + L ++  +  L LS+  +  +G K +
Sbjct: 787 GRYLASAIQKSSSIFDVGMWGNSIGDEGAEAFAEALRNHPKLTNLSLSANGITSKGGKLL 846

Query: 267 AELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGL 326
           +E LK NS LR+  L  N +        AE +  N+ +  L L  N     G   LA+ L
Sbjct: 847 SEALKENSTLRIFWLVQNELTDDAAPHFAELVKVNTGLTHLWLINNQFSVHGIKHLAEAL 906

Query: 327 EGNKSLRELHLHGNSIGDEGIRALMS 352
             N +L+E+ + GN + +E  +  M+
Sbjct: 907 THNSALKEICVKGNQLSEEEEKEFMA 932



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 4/202 (1%)

Query: 158 AKELRA----FSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
            K+LR      + V +      D  +  LAE L  ++  E +    N IT  G K    +
Sbjct: 706 VKQLRPSFCKITVVRLCVNQLSDSSIEVLAEELCKHKVVEVLGLYNNHITDVGAKLVAQI 765

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           ++    L+ + +  N I   G + L   +  ++ +  + +    + DEGA+A AE L+N+
Sbjct: 766 IEECPKLRVVKIGKNKITSVGGRYLASAIQKSSSIFDVGMWGNSIGDEGAEAFAEALRNH 825

Query: 274 SILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLR 333
             L  L L+ N I   G   L+EAL ENST+R   L  N      A   A+ ++ N  L 
Sbjct: 826 PKLTNLSLSANGITSKGGKLLSEALKENSTLRIFWLVQNELTDDAAPHFAELVKVNTGLT 885

Query: 334 ELHLHGNSIGDEGIRALMSGLS 355
            L L  N     GI+ L   L+
Sbjct: 886 HLWLINNQFSVHGIKHLAEALT 907


>gi|109071337|ref|XP_001099848.1| PREDICTED: t-complex-associated testis-expressed protein 1 [Macaca
           mulatta]
 gi|355748595|gb|EHH53078.1| hypothetical protein EGM_13641 [Macaca fascicularis]
          Length = 501

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 2/187 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L 
Sbjct: 256 FEWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 315

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G R     L+    +L VL++ NN + A GA  +A  + +  +L+ +NL +N 
Sbjct: 316 HNLIGDRGARGAAKLLN--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNC 373

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG D
Sbjct: 374 IEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLD 433

Query: 459 GAKALSE 465
           G K L E
Sbjct: 434 GGKQLLE 440



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSHNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL N+S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-NHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 474



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 2/211 (0%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R ++  L      L  LD+ +N I  +GA  
Sbjct: 268 CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSHNLIGDRGARG 326

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  
Sbjct: 327 AAKLLNHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHA 385

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N
Sbjct: 386 LQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDN 445

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
            T+   DLR + +  E    + Q+     EA
Sbjct: 446 KTLLEFDLRLSDVAQESEYLIGQALYANREA 476



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 30/212 (14%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL++N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSHNLIGDRGARGAAKLLN-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEGAKCLAQSFKV---------------------------VNEALTSIDL 535
            L+LR N + DEG + LA + +                            +N  LTSI+L
Sbjct: 366 SLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINL 425

Query: 536 AFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           + N I  DG   + + +  N+ +    L L++
Sbjct: 426 SCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 457



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    +  SL  +   EE+  +
Sbjct: 256 FEWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 315

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +    +L  +  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 316 HNLIGDRGARGAAKLLNHS-RLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 435 GKQLLEGMSDNKTLLEFDLRLSDVAQE 461


>gi|399498038|emb|CCG20347.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G   L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMTGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASRIAAKQLLAKLSLSENELKDEGAIQIAKALEGHSHLIEVDMSSNTLRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G   L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L+ N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMTGNDITAEAASAIASRIAAKQLLAKLSLSENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNTLRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G   +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L+ NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMTGNDITAEAAS-AIASRIAAKQLLAKLSLSENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNTLRRAGARVL 459



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 16/251 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGVDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGIVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALK 553
           +GA AIA ALK
Sbjct: 369 EGAIAIANALK 379


>gi|399497992|emb|CCG20324.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 117/493 (23%), Positives = 204/493 (41%), Gaps = 63/493 (12%)

Query: 69  RVYRQSQSDNALTTAPVKQIASFVV--------PAGVFVSATFVLWKLVEKLL------M 114
           R YR    + A   A   + A+F +        P G   SA  +  +   KL+      M
Sbjct: 44  RKYRSLSKEEAAKNAEEIEDAAFTIANQHYEKEPDGDGSSAVQLYARECSKLILEILKKM 103

Query: 115 PKPSRPS------KPTAEGMNWSVGAGTNLLSGFTGKLFRESKQTLNEFAKELRAFSSVD 168
           PKP           PT +   + +  G      F      E+++ L    +   ++S + 
Sbjct: 104 PKPEDKEISISEVVPTVQETFFDISKGKR---AFIEA--EEAQELLKPLKEPGNSYSKIC 158

Query: 169 MSGRNFGDEGLFFLAESLG-YNQTAEEVS---FAANGITAAGIKA---FDGVLQSNIALK 221
            S R+FG +        L       +EV    F A    A  +     F   L+ +  LK
Sbjct: 159 FSNRSFGIDAARITGPILAALKDQLKEVDLSDFVAGRHEAEALDVMNIFSEALEGS-NLK 217

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLEL 281
            LNLS N +G++GV+     L     +E L L +  +  E A A++EL+ +   L+VL  
Sbjct: 218 FLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHF 277

Query: 282 NNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNS 341
           +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  N 
Sbjct: 278 HNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNM 337

Query: 342 IGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGD 401
            G E    L   LS  +                             +L  I L   ++ D
Sbjct: 338 FGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNLED 368

Query: 402 EGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           EGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +GA
Sbjct: 369 EGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGA 428

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
             +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   L 
Sbjct: 429 IQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELK 488

Query: 521 QSFKVVNEALTSI 533
           + FK   E L S+
Sbjct: 489 EIFKKSPEMLASL 501



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A  +A       + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAASAIASC-IAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459


>gi|399497944|emb|CCG20300.1| Ran GTPase activating protein 2 [Solanum cardiophyllum]
          Length = 553

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELEDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELEDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNLISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG  +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NVFSEALEGC-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE+ D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELEDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 123/270 (45%), Gaps = 19/270 (7%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  K  E  + L+ L   GNS           G +  R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIKAEEAEELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHV-AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTID 421
               G N   A    +V +E ++ C +L ++NL  N +G++G       L+    +  + 
Sbjct: 190 DFVAGRNEAEALDVMNVFSEALEGC-NLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELF 248

Query: 422 LGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWC 481
           L  + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    
Sbjct: 249 LMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSST 308

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIR 541
           ++G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + 
Sbjct: 309 RVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLE 367

Query: 542 DDGAFAIAQALKANEDVAVTSLNLANNFLT 571
           D+GA AIA ALK +   ++  L +A N +T
Sbjct: 368 DEGAIAIANALK-DSAPSLAVLEMAGNDIT 396



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELEDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNLISEEGVDELKEIFKKSPEML 498


>gi|399497980|emb|CCG20318.1| Ran GTPase activating protein 2 [Solanum phureja]
          Length = 553

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AIA ALK +   ++  L +A N +T
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|399497896|emb|CCG20276.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLVSL 501



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNSIGDE-------GIRAL-MSG--LSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS G         GI A  ++G  L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKESGNSYGKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AIA ALK +   ++  L +A N +T
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|386333502|ref|YP_006029672.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
 gi|334195951|gb|AEG69136.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
          Length = 535

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 168/358 (46%), Gaps = 78/358 (21%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRVLE 280
           TLN S N +G EGV+ L D            L+S+DL + G   A A+ L  +  L +L 
Sbjct: 218 TLNASRNGVGGEGVRALVDCKT---------LTSLDLSENGLGDAEAQRLGASERLTMLN 268

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGN 340
           +N N ID  G                                A+ L   K+L  L + GN
Sbjct: 269 VNRNRIDVPG--------------------------------ARALAACKTLTSLDIGGN 296

Query: 341 SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIG 400
           SIGD G+ AL++       +L  L++    + A G   +A+    CK+L  + +  N+IG
Sbjct: 297 SIGDAGVEALLA-----HTQLTTLNVERAGVGAHGVRALAD----CKTLTSLRIDNNNIG 347

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGA 460
           DEGA+ +A     + ++T +    N I   GA A+      N+++T+L+L +N +G  GA
Sbjct: 348 DEGAKTLA----ASTSLTALHSESNGIGLAGAKAL----AANTMLTTLNLGHNSVGDAGA 399

Query: 461 KALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLA 520
           +A      +  N   + L   + G S A  +   L  + T++ LD+  N ++D GA+  A
Sbjct: 400 QA------WLANTKLVSLSVRRNGLSDAGAI--RLAASKTLTTLDVGDNAIKDTGARAFA 451

Query: 521 QSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSAL 578
                 N  LT+++L+ NEI + G    A+AL AN  +A  SL+L NN + + G  AL
Sbjct: 452 -----ANRTLTTLNLSSNEIGNAG----ARALAANTRLA--SLDLRNNRMLEAGVRAL 498



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 26/193 (13%)

Query: 160 ELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIA 219
           + +  +S+ +   N GDEG   LA S        E    +NGI  AG KA      +N  
Sbjct: 332 DCKTLTSLRIDNNNIGDEGAKTLAASTSLTALHSE----SNGIGLAGAKAL----AANTM 383

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEG-AKAIAELLKNNSILRV 278
           L TLNL  N +GD G +         A +   +L S+ +R  G + A A  L  +  L  
Sbjct: 384 LTTLNLGHNSVGDAGAQ---------AWLANTKLVSLSVRRNGLSDAGAIRLAASKTLTT 434

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           L++ +N I  +G    A A   N T+ +L+L+ N  G  GA ALA     N  L  L L 
Sbjct: 435 LDVGDNAIKDTG----ARAFAANRTLTTLNLSSNEIGNAGARALA----ANTRLASLDLR 486

Query: 339 GNSIGDEGIRALM 351
            N + + G+RAL+
Sbjct: 487 NNRMLEAGVRALL 499


>gi|148699225|gb|EDL31172.1| mCG18474 [Mus musculus]
          Length = 923

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 3/285 (1%)

Query: 190 QTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGV 248
           QT          I+ +  +     + +N  L  L+LSGN IG  G++ LC+ L      +
Sbjct: 604 QTQSTYLLKRCQISGSACQDLAAAVIANRNLIRLDLSGNSIGVPGLELLCEGLQHPRCRL 663

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN-STIRSL 307
           + +QL    L     +++A +L NNS L  L+L  N ++ SG   L + L      +R+L
Sbjct: 664 QMIQLRKCLLEAAAGRSLASVLSNNSYLVELDLTGNPLEDSGLKLLCQGLRHPVCRLRTL 723

Query: 308 HLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIG 367
            L   + G      LA  L+ N+SL EL L  N +GD G+  L  GLS    KL  L +G
Sbjct: 724 WLKICHLGQASCKDLASTLKMNQSLLELDLGLNDLGDSGVLLLCEGLSHPDCKLQTLRLG 783

Query: 368 NNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALK-QNRTITTIDLGGNN 426
              + +     +A  ++    L  ++L  ND+GD G + + + L+ Q   +  + L    
Sbjct: 784 ICRLGSVACVGIASVLQVNTCLQELDLSFNDLGDRGLQLLGEGLRHQTCRLQKLWLDSCG 843

Query: 427 IHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG 471
           + SK    ++ +L  +  +  L L  N +G  G   L + L+  G
Sbjct: 844 LTSKACEDLSSILGISQTLHELYLTNNALGDTGVCLLCKRLRHPG 888



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 3/255 (1%)

Query: 162 RAFSSVDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIAL 220
           R    +D+SG + G  GL  L E L + +   + +      + AA  ++   VL +N  L
Sbjct: 632 RNLIRLDLSGNSIGVPGLELLCEGLQHPRCRLQMIQLRKCLLEAAAGRSLASVLSNNSYL 691

Query: 221 KTLNLSGNPIGDEGVKCLCDILVDNAGVER-LQLSSVDLRDEGAKAIAELLKNNSILRVL 279
             L+L+GNP+ D G+K LC  L       R L L    L     K +A  LK N  L  L
Sbjct: 692 VELDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCKDLASTLKMNQSLLEL 751

Query: 280 ELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
           +L  N +  SG   L E L   +  +++L L     G++    +A  L+ N  L+EL L 
Sbjct: 752 DLGLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQVNTCLQELDLS 811

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N +GD G++ L  GL  +  +L  L + +  +++K    ++  +   ++L  + L  N 
Sbjct: 812 FNDLGDRGLQLLGEGLRHQTCRLQKLWLDSCGLTSKACEDLSSILGISQTLHELYLTNNA 871

Query: 399 IGDEGAEKIADALKQ 413
           +GD G   +   L+ 
Sbjct: 872 LGDTGVCLLCKRLRH 886



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 31/275 (11%)

Query: 281 LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLE------------- 327
           L    I  S    LA A++ N  +  L L+GN  G  G   L +GL+             
Sbjct: 611 LKRCQISGSACQDLAAAVIANRNLIRLDLSGNSIGVPGLELLCEGLQHPRCRLQMIQLRK 670

Query: 328 ----------------GNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSI 371
                            N  L EL L GN + D G++ L  GL     +L  L +    +
Sbjct: 671 CLLEAAAGRSLASVLSNNSYLVELDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHL 730

Query: 372 SAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLGGNNIHSK 430
                  +A  +K  +SLL ++L +ND+GD G   + + L   +  + T+ LG   + S 
Sbjct: 731 GQASCKDLASTLKMNQSLLELDLGLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSV 790

Query: 431 GASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAE 489
               IA VL+ N+ +  LDL++N +G  G + L E L+     +  L L  C + +   E
Sbjct: 791 ACVGIASVLQVNTCLQELDLSFNDLGDRGLQLLGEGLRHQTCRLQKLWLDSCGLTSKACE 850

Query: 490 FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK 524
            ++ +L  + T+  L L  N L D G   L +  +
Sbjct: 851 DLSSILGISQTLHELYLTNNALGDTGVCLLCKRLR 885



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 36/256 (14%)

Query: 330 KSLRELHLHGN--SIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCK 387
           +S   LHLHG+  S G E      SG+ ++   L    +    IS      +A  +   +
Sbjct: 577 RSTEVLHLHGSAYSTGMEDDPPEPSGVQTQSTYL----LKRCQISGSACQDLAAAVIANR 632

Query: 388 SLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVIT 446
           +L+ ++L  N IG  G E + + L+  R  +  I L    + +    ++A VL +NS + 
Sbjct: 633 NLIRLDLSGNSIGVPGLELLCEGLQHPRCRLQMIQLRKCLLEAAAGRSLASVLSNNSYLV 692

Query: 447 SLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVADMLRYNNTISILD 505
            LDL  NP+   G K L + L+     + TL L  C +G +  + +A  L+ N ++  LD
Sbjct: 693 ELDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCKDLASTLKMNQSLLELD 752

Query: 506 LRANGLRDEGA----------KCLAQSFKV------------------VNEALTSIDLAF 537
           L  N L D G            C  Q+ ++                  VN  L  +DL+F
Sbjct: 753 LGLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQVNTCLQELDLSF 812

Query: 538 NEIRDDGAFAIAQALK 553
           N++ D G   + + L+
Sbjct: 813 NDLGDRGLQLLGEGLR 828



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 3/201 (1%)

Query: 167 VDMSGRNFGDEGLFFLAESLGYNQT-AEEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
           +D++G    D GL  L + L +       +      +  A  K     L+ N +L  L+L
Sbjct: 694 LDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCKDLASTLKMNQSLLELDL 753

Query: 226 SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
             N +GD GV  LC+ L   +  ++ L+L    L       IA +L+ N+ L+ L+L+ N
Sbjct: 754 GLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQVNTCLQELDLSFN 813

Query: 285 MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
            +   G   L E L   +  ++ L L+     +     L+  L  +++L EL+L  N++G
Sbjct: 814 DLGDRGLQLLGEGLRHQTCRLQKLWLDSCGLTSKACEDLSSILGISQTLHELYLTNNALG 873

Query: 344 DEGIRALMSGLSSRKGKLAVL 364
           D G+  L   L     KL VL
Sbjct: 874 DTGVCLLCKRLRHPGCKLRVL 894


>gi|428171629|gb|EKX40544.1| hypothetical protein GUITHDRAFT_60048, partial [Guillardia theta
           CCMP2712]
          Length = 218

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 1/193 (0%)

Query: 361 LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTI 420
           L  LD+  N I A+G  H+++ +++  +L +++++ N + D G   + DAL   R + T+
Sbjct: 17  LVHLDVRGNKIGAEGCRHLSDILRHLVNLEFLSVFNNQVCDAGLTLLTDALHHVRGLKTL 76

Query: 421 DLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGW 480
           +LGGNNI   GA  +   L     + SL++  N +G +GA +L   L  +  +  L++  
Sbjct: 77  ELGGNNIRKDGAQRLGEYLACKPTLVSLEMGCNHVGNEGATSLGRALALNTRLEHLRICN 136

Query: 481 CQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
             IG+ G  F+A  ++    +  L L  N + DEGA  +A+ F V    L  +DL  N I
Sbjct: 137 NNIGSEGCFFLARSMKSTPNLEALYLGFNEIGDEGAGHVAECF-VCLPRLRHVDLYNNGI 195

Query: 541 RDDGAFAIAQALK 553
             +G   IA+ L+
Sbjct: 196 GQEGVTRIARNLR 208



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 109/247 (44%), Gaps = 29/247 (11%)

Query: 176 DEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGV 235
           +EG+ ++ E   Y  +   +    N I A G +    +L+  + L+ L++  N + D G+
Sbjct: 1   EEGIMYIREVFPYMPSLVHLDVRGNKIGAEGCRHLSDILRHLVNLEFLSVFNNQVCDAGL 60

Query: 236 KCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLA 295
             L D L    G++ L+L   ++R +GA+ + E L     L  LE+  N +   G TSL 
Sbjct: 61  TLLTDALHHVRGLKTLELGGNNIRKDGAQRLGEYLACKPTLVSLEMGCNHVGNEGATSLG 120

Query: 296 EALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLS 355
            AL  N+ +  L +  N  G+ G   LA+ ++   +L  L+L  N IGDE          
Sbjct: 121 RALALNTRLEHLRICNNNIGSEGCFFLARSMKSTPNLEALYLGFNEIGDE---------- 170

Query: 356 SRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
                              GA HVAE       L  ++LY N IG EG  +IA  L+  R
Sbjct: 171 -------------------GAGHVAECFVCLPRLRHVDLYNNGIGQEGVTRIARNLRHLR 211

Query: 416 TITTIDL 422
            +  + L
Sbjct: 212 HLEQLRL 218



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 1/190 (0%)

Query: 261 EGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGAN 320
           EG + ++++L++   L  L + NN +  +G T L +AL     +++L L GN     GA 
Sbjct: 30  EGCRHLSDILRHLVNLEFLSVFNNQVCDAGLTLLTDALHHVRGLKTLELGGNNIRKDGAQ 89

Query: 321 ALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVA 380
            L + L    +L  L +  N +G+EG  +L   L+    +L  L I NN+I ++G F +A
Sbjct: 90  RLGEYLACKPTLVSLEMGCNHVGNEGATSLGRALALNT-RLEHLRICNNNIGSEGCFFLA 148

Query: 381 EYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK 440
             +K+  +L  + L  N+IGDEGA  +A+       +  +DL  N I  +G + IAR L+
Sbjct: 149 RSMKSTPNLEALYLGFNEIGDEGAGHVAECFVCLPRLRHVDLYNNGIGQEGVTRIARNLR 208

Query: 441 DNSVITSLDL 450
               +  L L
Sbjct: 209 HLRHLEQLRL 218



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 34/207 (16%)

Query: 401 DEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLK-----------DNSV----- 444
           +EG   I +      ++  +D+ GN I ++G   ++ +L+           +N V     
Sbjct: 1   EEGIMYIREVFPYMPSLVHLDVRGNKIGAEGCRHLSDILRHLVNLEFLSVFNNQVCDAGL 60

Query: 445 ------------ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVA 492
                       + +L+L  N I  DGA+ L E L     + +L++G   +G  GA  + 
Sbjct: 61  TLLTDALHHVRGLKTLELGGNNIRKDGAQRLGEYLACKPTLVSLEMGCNHVGNEGATSLG 120

Query: 493 DMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQAL 552
             L  N  +  L +  N +  EG   LA+S K     L ++ L FNEI D+GA  +A+  
Sbjct: 121 RALALNTRLEHLRICNNNIGSEGCFFLARSMKST-PNLEALYLGFNEIGDEGAGHVAECF 179

Query: 553 KANEDVAVTSLNLANNFLTKFGQSALT 579
                V +  L   + +    GQ  +T
Sbjct: 180 -----VCLPRLRHVDLYNNGIGQEGVT 201



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 68/172 (39%)

Query: 138 LLSGFTGKLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSF 197
            LS F  ++       L +    +R   ++++ G N   +G   L E L    T   +  
Sbjct: 47  FLSVFNNQVCDAGLTLLTDALHHVRGLKTLELGGNNIRKDGAQRLGEYLACKPTLVSLEM 106

Query: 198 AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
             N +   G  +    L  N  L+ L +  N IG EG   L   +     +E L L   +
Sbjct: 107 GCNHVGNEGATSLGRALALNTRLEHLRICNNNIGSEGCFFLARSMKSTPNLEALYLGFNE 166

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHL 309
           + DEGA  +AE       LR ++L NN I   G T +A  L     +  L L
Sbjct: 167 IGDEGAGHVAECFVCLPRLRHVDLYNNGIGQEGVTRIARNLRHLRHLEQLRL 218



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 81/193 (41%)

Query: 145 KLFRESKQTLNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITA 204
           K+  E  + L++  + L     + +      D GL  L ++L + +  + +    N I  
Sbjct: 26  KIGAEGCRHLSDILRHLVNLEFLSVFNNQVCDAGLTLLTDALHHVRGLKTLELGGNNIRK 85

Query: 205 AGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAK 264
            G +     L     L +L +  N +G+EG   L   L  N  +E L++ + ++  EG  
Sbjct: 86  DGAQRLGEYLACKPTLVSLEMGCNHVGNEGATSLGRALALNTRLEHLRICNNNIGSEGCF 145

Query: 265 AIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAK 324
            +A  +K+   L  L L  N I   G   +AE  +    +R + L  N  G  G   +A+
Sbjct: 146 FLARSMKSTPNLEALYLGFNEIGDEGAGHVAECFVCLPRLRHVDLYNNGIGQEGVTRIAR 205

Query: 325 GLEGNKSLRELHL 337
            L   + L +L L
Sbjct: 206 NLRHLRHLEQLRL 218


>gi|399498062|emb|CCG20359.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 30/315 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+    +L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS  +                             +L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALSKHE-----------------------------NLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  IA+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTSI 533
           L + FK   E L S+
Sbjct: 487 LKEIFKKSPEMLASL 501



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKLLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L  +  +  + LS ++L DEGA AIA  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 17/269 (6%)

Query: 318 GANALAKGLEGNKSLRELHLHGNS----------IGDEGIRALMSGLSSRKGKLAVLDI- 366
           G  A  +  E  + L+ L   GNS           G    R     L++ K +L  +D+ 
Sbjct: 130 GKRAFIEAEEAQELLKPLKESGNSYSKICFSNRSFGIHAARIAGPILAALKDQLKEVDLS 189

Query: 367 ----GNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDL 422
               G N   A    ++        +L ++NL  N +G++G       L+    +  + L
Sbjct: 190 DFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFL 249

Query: 423 GGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQ 482
             + I  + A+A++ ++     +  L    N  G +GA A++E++K    +   +    +
Sbjct: 250 MNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTR 309

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G+ G   + + L   + +  LDLR N    E    L ++    +E LT I L++  + D
Sbjct: 310 VGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALS-KHENLTEIYLSYLNLED 368

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLT 571
           +GA AIA ALK +   ++  L +A N +T
Sbjct: 369 EGAIAIANALK-DSAPSLAVLEMAGNDIT 396


>gi|73947407|ref|XP_533578.2| PREDICTED: NACHT, LRR and PYD domains-containing protein 9 [Canis
           lupus familiaris]
          Length = 991

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 209/490 (42%), Gaps = 71/490 (14%)

Query: 136 TNLLSGFTGKLFRESKQTLNEFAKELRAFSSVD--MSGRNFGD--EGLF------FLAES 185
           TNLL    G  F  SK+   E  + L++ S  D      NF +   GLF      F+A+ 
Sbjct: 507 TNLLETSFG--FLLSKELKQEITQCLKSLSQCDPNQVAVNFQELFSGLFETHEKGFVAQV 564

Query: 186 LGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDN 245
           + +    EEV+          I AF   L+    L+TL+L           C+ ++  D+
Sbjct: 565 MDF---FEEVNIYIGNTEDLVISAF--CLKHCQNLRTLHL-----------CIENVFSDD 608

Query: 246 AGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN-STI 304
           +G      S ++ +    +    +   N   ++L+L+N     +    L +AL +    +
Sbjct: 609 SG------SIINEKLSFWQDFCSVFTTNENFQMLDLDNCKFSEASLAILCKALAQPVCKL 662

Query: 305 RSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVL 364
           +  +   ++G +    AL K +  N  L+ L+LHG+S+    +R L   L      +  L
Sbjct: 663 QKYNFASDFGSS---PALHKAILHNPHLKHLNLHGSSLSHVDVRQLCEMLKHPTCSIEEL 719

Query: 365 DIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQ-NRTITTIDLG 423
            +G   I+A+    +A  +   K L  ++L  N + +EG   + DALK  +  + T+ L 
Sbjct: 720 MLGMCDITAEACEEIASVLVCNKKLKLLSLAENPLRNEGMLMLCDALKHPDCVLETLLLM 779

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGN--INTLKLGWC 481
              + S     I++ L  N  ++ LDL  N +  DG  +L E LK H N  I  L L  C
Sbjct: 780 CCCLTSVACDYISQALLCNKSLSFLDLESNFLKDDGVASLCEALK-HPNCHIEQLWLADC 838

Query: 482 QIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFK----------------- 524
            + +   + ++D+L  N  + IL L +N ++D G K L ++ K                 
Sbjct: 839 SLTSLCCKNLSDVLVCNEKLKILKLGSNDIQDAGVKQLCEALKHPDCKVEHLGLDMCQLT 898

Query: 525 -----------VVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKF 573
                       V ++L S++L +  +  DGA  + +AL  + D A+  L L  +   K 
Sbjct: 899 TACCEALASALTVCKSLKSLNLHWISLDRDGAVVLCEALN-HLDCALQQLGLDKSVFDKE 957

Query: 574 GQSALTDAKD 583
            Q  LT  ++
Sbjct: 958 IQMLLTAVEE 967


>gi|326435524|gb|EGD81094.1| hypothetical protein PTSG_13136 [Salpingoeca sp. ATCC 50818]
          Length = 1190

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 103/193 (53%), Gaps = 7/193 (3%)

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N    + IRA+ +     K       +G++ ++A     +AE +K+   L  ++L+ N I
Sbjct: 28  NDEAKDKIRAIANNTCGDKVSFVRAGLGDSGVTA-----LAEALKDNTCLKELDLWYNRI 82

Query: 400 GDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADG 459
            DEGA  +A+ LK N T+T + L  NNI  +GA A+A  LK N+ +T+L L  N IG +G
Sbjct: 83  SDEGALALAEVLKHNTTMTKLFLEHNNIGPEGAVALADALKHNTTLTALMLRGNRIGPEG 142

Query: 460 AKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCL 519
           A AL+E+LK +  + TL L    I   G   + +ML+YN TI  LD +   L    ++C+
Sbjct: 143 AVALAEMLKHNTTLTTLDLARNSIEDKGILALGEMLKYNTTIEGLDNQVTFLPANASRCV 202

Query: 520 AQSFKVVNEALTS 532
              F  + E L S
Sbjct: 203 --RFCPLTEILIS 213



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 88/165 (53%), Gaps = 2/165 (1%)

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L    + DE  +KI  A+  N     +      +   G +A+A  LKDN+ +  LDL YN
Sbjct: 22  LAQTKLNDEAKDKIR-AIANNTCGDKVSFVRAGLGDSGVTALAEALKDNTCLKELDLWYN 80

Query: 454 PIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRD 513
            I  +GA AL+EVLK +  +  L L    IG  GA  +AD L++N T++ L LR N +  
Sbjct: 81  RISDEGALALAEVLKHNTTMTKLFLEHNNIGPEGAVALADALKHNTTLTALMLRGNRIGP 140

Query: 514 EGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
           EGA  LA+  K  N  LT++DLA N I D G  A+ + LK N  +
Sbjct: 141 EGAVALAEMLKH-NTTLTTLDLARNSIEDKGILALGEMLKYNTTI 184



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/121 (44%), Positives = 74/121 (61%)

Query: 230 IGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYS 289
           +GD GV  L + L DN  ++ L L    + DEGA A+AE+LK+N+ +  L L +N I   
Sbjct: 54  LGDSGVTALAEALKDNTCLKELDLWYNRISDEGALALAEVLKHNTTMTKLFLEHNNIGPE 113

Query: 290 GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRA 349
           G  +LA+AL  N+T+ +L L GN  G  GA ALA+ L+ N +L  L L  NSI D+GI A
Sbjct: 114 GAVALADALKHNTTLTALMLRGNRIGPEGAVALAEMLKHNTTLTTLDLARNSIEDKGILA 173

Query: 350 L 350
           L
Sbjct: 174 L 174



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 12/210 (5%)

Query: 242 LVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLEN 301
           + +N   +++      L D G  A+AE LK+N+ L+ L+L  N I   G  +LAE L  N
Sbjct: 38  IANNTCGDKVSFVRAGLGDSGVTALAEALKDNTCLKELDLWYNRISDEGALALAEVLKHN 97

Query: 302 STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKL 361
           +T+  L L  N  G  GA ALA  L+ N +L  L L GN IG EG  AL   L      L
Sbjct: 98  TTMTKLFLEHNNIGPEGAVALADALKHNTTLTALMLRGNRIGPEGAVALAEML-KHNTTL 156

Query: 362 AVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNR--TITT 419
             LD+  NSI  KG   + E +K        N  +  + ++     A+A +  R   +T 
Sbjct: 157 TTLDLARNSIEDKGILALGEMLK-------YNTTIEGLDNQVTFLPANASRCVRFCPLTE 209

Query: 420 IDLGGNNIHSKGAS--AIARVLKDNSVITS 447
           I +  N++H+ G +  A+  VLK   V+ +
Sbjct: 210 ILISSNSMHNNGTTERAMVNVLKQLQVMDT 239



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 77/147 (52%)

Query: 189 NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGV 248
           N   ++VSF   G+  +G+ A    L+ N  LK L+L  N I DEG   L ++L  N  +
Sbjct: 41  NTCGDKVSFVRAGLGDSGVTALAEALKDNTCLKELDLWYNRISDEGALALAEVLKHNTTM 100

Query: 249 ERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLH 308
            +L L   ++  EGA A+A+ LK+N+ L  L L  N I   G  +LAE L  N+T+ +L 
Sbjct: 101 TKLFLEHNNIGPEGAVALADALKHNTTLTALMLRGNRIGPEGAVALAEMLKHNTTLTTLD 160

Query: 309 LNGNYGGALGANALAKGLEGNKSLREL 335
           L  N     G  AL + L+ N ++  L
Sbjct: 161 LARNSIEDKGILALGEMLKYNTTIEGL 187



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 68/134 (50%)

Query: 174 FGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDE 233
            GD G+  LAE+L  N   +E+    N I+  G  A   VL+ N  +  L L  N IG E
Sbjct: 54  LGDSGVTALAEALKDNTCLKELDLWYNRISDEGALALAEVLKHNTTMTKLFLEHNNIGPE 113

Query: 234 GVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTS 293
           G   L D L  N  +  L L    +  EGA A+AE+LK+N+ L  L+L  N I+  G  +
Sbjct: 114 GAVALADALKHNTTLTALMLRGNRIGPEGAVALAEMLKHNTTLTTLDLARNSIEDKGILA 173

Query: 294 LAEALLENSTIRSL 307
           L E L  N+TI  L
Sbjct: 174 LGEMLKYNTTIEGL 187



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L E  K+      +D+      DEG   LAE L +N T  ++    N I   G  A    
Sbjct: 62  LAEALKDNTCLKELDLWYNRISDEGALALAEVLKHNTTMTKLFLEHNNIGPEGAVALADA 121

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L+ N  L  L L GN IG EG   L ++L  N  +  L L+   + D+G  A+ E+LK N
Sbjct: 122 LKHNTTLTALMLRGNRIGPEGAVALAEMLKHNTTLTTLDLARNSIEDKGILALGEMLKYN 181

Query: 274 SILRVLE-----LNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGAL 317
           + +  L+     L  N      F  L E L+ ++   S+H NG    A+
Sbjct: 182 TTIEGLDNQVTFLPANASRCVRFCPLTEILISSN---SMHNNGTTERAM 227



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 3/98 (3%)

Query: 483 IGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRD 542
           +G SG   +A+ L+ N  +  LDL  N + DEGA  LA+  K  N  +T + L  N I  
Sbjct: 54  LGDSGVTALAEALKDNTCLKELDLWYNRISDEGALALAEVLKH-NTTMTKLFLEHNNIGP 112

Query: 543 DGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           +GA A+A ALK N    +T+L L  N +   G  AL +
Sbjct: 113 EGAVALADALKHN--TTLTALMLRGNRIGPEGAVALAE 148



 Score = 46.2 bits (108), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 3/72 (4%)

Query: 510 GLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLNLANNF 569
           GL D G   LA++ K  N  L  +DL +N I D+GA A+A+ LK N    +T L L +N 
Sbjct: 53  GLGDSGVTALAEALKD-NTCLKELDLWYNRISDEGALALAEVLKHN--TTMTKLFLEHNN 109

Query: 570 LTKFGQSALTDA 581
           +   G  AL DA
Sbjct: 110 IGPEGAVALADA 121


>gi|75076248|sp|Q4R642.1|TCTE1_MACFA RecName: Full=T-complex-associated testis-expressed protein 1;
           Short=Tcte-1
 gi|67970178|dbj|BAE01433.1| unnamed protein product [Macaca fascicularis]
          Length = 501

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 2/187 (1%)

Query: 279 LELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLH 338
            E N  +  Y    SLA A+    T++   L  +      A  + + L  +  L EL L 
Sbjct: 256 FEWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 315

Query: 339 GNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMND 398
            N IGD G R     L+    +L VL++ NN + A GA  +A  + +  +L+ +NL +N 
Sbjct: 316 HNLIGDRGARGAAKLLN--HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNC 373

Query: 399 IGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
           I DEG + +A AL+ N+ +TT+ LGGN +    A+ +++VL  N+ +TS++L+ N IG D
Sbjct: 374 IEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLD 433

Query: 459 GAKALSE 465
           G K L E
Sbjct: 434 GGKQLLE 440



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 9/212 (4%)

Query: 204 AAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGA 263
           AA IKA          LK   L+ + + D+  + +   L+D+  +E L LS   + D GA
Sbjct: 272 AAAIKACH-------TLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSHNLIGDRGA 324

Query: 264 KAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA 323
           +  A+LL N+S LRVL L NN +   G  SLA AL  N+ + SL+L  N     G  ALA
Sbjct: 325 RGAAKLL-NHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALA 383

Query: 324 KGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI 383
             L+ NK L  LHL GN +  E    L+S + +    L  +++  N I   G   + E +
Sbjct: 384 HALQTNKCLTTLHLGGNELS-EPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGM 442

Query: 384 KNCKSLLWINLYMNDIGDEGAEKIADALKQNR 415
            + K+LL  +L ++D+  E    I  AL  NR
Sbjct: 443 SDNKTLLEFDLRLSDVAQESEYLIGQALYANR 474



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 2/211 (0%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
            ++LA  ++   +L+   L  + + D+  R ++  L      L  LD+ +N I  +GA  
Sbjct: 268 CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHP-VLEELDLSHNLIGDRGARG 326

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARV 438
            A+ + + + L  +NL  N +   GA+ +A AL  N  + +++L  N I  +G  A+A  
Sbjct: 327 AAKLLNHSR-LRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHA 385

Query: 439 LKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN 498
           L+ N  +T+L L  N +    A  LS+VL  +  + ++ L    IG  G + + + +  N
Sbjct: 386 LQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDN 445

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEA 529
            T+   DLR + +  E    + Q+     EA
Sbjct: 446 KTLLEFDLRLSDVAQESEYLIGQALYANREA 476



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 30/212 (14%)

Query: 383 IKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDN 442
           +K+C      NL++    D     +A A+K   T+    L  + +    A  I R L D+
Sbjct: 249 VKDCGMNFEWNLFLFTYRD--CHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDH 306

Query: 443 SVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTIS 502
            V+  LDL++N IG  GA+  +++L  H  +  L L   Q+ A GA+ +A  L +N  + 
Sbjct: 307 PVLEELDLSHNLIGDRGARGAAKLLN-HSRLRVLNLANNQVRAPGAQSLAHALAHNTNLI 365

Query: 503 ILDLRANGLRDEGAKCLAQSFKV---------------------------VNEALTSIDL 535
            L+LR N + DEG + LA + +                            +N  LTSI+L
Sbjct: 366 SLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINL 425

Query: 536 AFNEIRDDGAFAIAQALKANEDVAVTSLNLAN 567
           + N I  DG   + + +  N+ +    L L++
Sbjct: 426 SCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSD 457



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 4/207 (1%)

Query: 142 FTGKLFRESKQTLNEFAKELRAFSSVD---MSGRNFGDEGLFFLAESLGYNQTAEEVSFA 198
           F   LF  + +  +  A  ++A  ++    ++     D+    +  SL  +   EE+  +
Sbjct: 256 FEWNLFLFTYRDCHSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLS 315

Query: 199 ANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDL 258
            N I   G +    +L  +  L+ LNL+ N +   G + L   L  N  +  L L    +
Sbjct: 316 HNLIGDRGARGAAKLLNHS-RLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCI 374

Query: 259 RDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALG 318
            DEG +A+A  L+ N  L  L L  N +     T L++ L  N+T+ S++L+ N+ G  G
Sbjct: 375 EDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDG 434

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDE 345
              L +G+  NK+L E  L  + +  E
Sbjct: 435 GKQLLEGMSDNKTLLEFDLRLSDVAQE 461


>gi|356575811|ref|XP_003556030.1| PREDICTED: RAN GTPase-activating protein 2-like [Glycine max]
          Length = 532

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 136/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF  +L+S   L+ L L  + I  E    +C+++     ++ L   
Sbjct: 216 LNLSDNALGEKGVRAFGALLKSQKCLEELYLMNDGISKEAALAVCELIPFTEKLKVLHFH 275

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  I   G  +L++AL   + ++ L L  N  
Sbjct: 276 NNMTGDEGALAIAEVVKRSPLLEDFRCSSTRIGSEGGVALSDALGNCAHLKKLDLRDNML 335

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G  G  +L+K L     LRE++L   ++ D+G  A++  L+     L VL++  N I+A 
Sbjct: 336 GVEGGVSLSKALTKQAELREVYLSYLNLEDDGAIAIVDALTEAAPHLEVLEMSGNDITAD 395

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  +   + L  +NL  N++ DEGA  I  A++ +  +  IDL  N I   GA  
Sbjct: 396 AAPAIAACLAAKQFLTKLNLSENELKDEGANLITKAIEGHVQLKEIDLSANQISRAGAQQ 455

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A  +   +    L++  N I  +G   L ++ K
Sbjct: 456 LAVTVVQKADFKLLNINGNFISDEGIDELKDIFK 489



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 151/332 (45%), Gaps = 22/332 (6%)

Query: 262 GAKAIAELLKNNSILRVLELNNNMIDYSGFT---SLAEAL---------LENSTIRSLHL 309
           GA  IAE      IL  ++     +D S F    S AEAL         LE S +RSL+L
Sbjct: 164 GAAQIAE-----PILTSIKDQLKEVDLSDFIAGRSEAEALDVMKIFSTALEGSVLRSLNL 218

Query: 310 NGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNN 369
           + N  G  G  A    L+  K L EL+L  + I  E   A+   L     KL VL   NN
Sbjct: 219 SDNALGEKGVRAFGALLKSQKCLEELYLMNDGISKEAALAVCE-LIPFTEKLKVLHFHNN 277

Query: 370 SISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHS 429
               +GA  +AE +K    L         IG EG   ++DAL     +  +DL  N +  
Sbjct: 278 MTGDEGALAIAEVVKRSPLLEDFRCSSTRIGSEGGVALSDALGNCAHLKKLDLRDNMLGV 337

Query: 430 KGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVL-KFHGNINTLKLGWCQIGASGA 488
           +G  ++++ L   + +  + L+Y  +  DGA A+ + L +   ++  L++    I A  A
Sbjct: 338 EGGVSLSKALTKQAELREVYLSYLNLEDDGAIAIVDALTEAAPHLEVLEMSGNDITADAA 397

Query: 489 EFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAI 548
             +A  L     ++ L+L  N L+DEGA  + ++ +  +  L  IDL+ N+I   GA  +
Sbjct: 398 PAIAACLAAKQFLTKLNLSENELKDEGANLITKAIEG-HVQLKEIDLSANQISRAGAQQL 456

Query: 549 AQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           A  +    D  +  LN+  NF++  G   L D
Sbjct: 457 AVTVVQKADFKL--LNINGNFISDEGIDELKD 486


>gi|399497958|emb|CCG20307.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 135/274 (49%)

Query: 195 VSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLS 254
           ++ + N +   G++AF   LQS   L+ L L  + I  E    + +++     ++ L   
Sbjct: 219 LNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFH 278

Query: 255 SVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYG 314
           +    DEGA AIAE++K + +L     ++  +   G + L EAL   S ++ L L  N  
Sbjct: 279 NNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMF 338

Query: 315 GALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAK 374
           G      L K L  +++L E++L   ++ DEG  A+ + L      LAVL++  N I+A+
Sbjct: 339 GPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVLEMAGNDITAE 398

Query: 375 GAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASA 434
            A  +A  I   + L  ++L  N++ DEGA +IA AL+ +  +  +D+  N +   GA  
Sbjct: 399 AASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARV 458

Query: 435 IARVLKDNSVITSLDLAYNPIGADGAKALSEVLK 468
           +A+ +        L++  N I  +G   L E+ K
Sbjct: 459 LAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 145/314 (46%), Gaps = 30/314 (9%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
           LK LNLS N +G++GV+     L     +E L L +  +  E A A++EL+ +   L+VL
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 280 ELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 339
             +NNM    G  ++AE +  +  +     +    G+ G + L + L     L++L L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 340 NSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDI 399
           N  G E    L   LS                             N ++L  I L   ++
Sbjct: 336 NMFGPEVGLVLCKALS-----------------------------NHENLTEIYLSYLNL 366

Query: 400 GDEGAEKIADALKQN-RTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGAD 458
            DEGA  +A+ALK +  ++  +++ GN+I ++ ASAIA  +    ++  L L  N +  +
Sbjct: 367 EDEGAIAMANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDE 426

Query: 459 GAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKC 518
           GA  +++ L+ H ++  + +    +  +GA  +A  + + +   +L++  N + +EG   
Sbjct: 427 GAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDE 486

Query: 519 LAQSFKVVNEALTS 532
           L + FK   E L S
Sbjct: 487 LKEIFKKSPEMLAS 500



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 320 NALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           N  ++ LEG+ +L+ L+L  N++G++G+RA    L S+   L  L + N+ IS + A  V
Sbjct: 205 NIFSEALEGS-NLKFLNLSDNALGEKGVRAFGKFLQSQTN-LEELFLMNDGISQEAANAV 262

Query: 380 AEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
           +E + + + L  ++ + N  GDEGA  IA+ +K++  +         + S+G S +   L
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAL 322

Query: 440 KDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYN- 498
              S +  LDL  N  G +    L + L  H N+  + L +  +   GA  +A+ L+ + 
Sbjct: 323 GMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSA 382

Query: 499 NTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDV 558
            ++++L++  N +  E A     S     + L  + L  NE++D+GA  IA+AL+ +   
Sbjct: 383 PSLAVLEMAGNDITAEAAS-AIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH- 440

Query: 559 AVTSLNLANNFLTKFGQSAL 578
            +  +++++N L + G   L
Sbjct: 441 -LIEVDMSSNALRRAGARVL 459



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 133/283 (46%), Gaps = 5/283 (1%)

Query: 299 LENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRK 358
           LE S ++ L+L+ N  G  G  A  K L+   +L EL L  + I  E   A+ S L    
Sbjct: 211 LEGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAV-SELVPST 269

Query: 359 GKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTIT 418
            KL VL   NN    +GA  +AE +K    L         +G EG   + +AL     + 
Sbjct: 270 EKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 419 TIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHG-NINTLK 477
            +DL  N    +    + + L ++  +T + L+Y  +  +GA A++  LK    ++  L+
Sbjct: 330 KLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVLE 389

Query: 478 LGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAF 537
           +    I A  A  +A  +     ++ L L  N L+DEGA  +A++ +  +  L  +D++ 
Sbjct: 390 MAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEG-HSHLIEVDMSS 448

Query: 538 NEIRDDGAFAIAQALKANEDVAVTSLNLANNFLTKFGQSALTD 580
           N +R  GA  +AQ +   ++  +  LN+  NF+++ G   L +
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKL--LNVNGNFISEEGVDELKE 489



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 175 GDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEG 234
           GDEG   +AE +  +   E+   ++  + + G       L     LK L+L  N  G E 
Sbjct: 283 GDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEV 342

Query: 235 VKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSI-LRVLELNNNMIDYSGFTS 293
              LC  L ++  +  + LS ++L DEGA A+A  LK+++  L VLE+  N I     ++
Sbjct: 343 GLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVLEMAGNDITAEAASA 402

Query: 294 LAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSG 353
           +A  +     +  L L  N     GA  +AK LEG+  L E+ +  N++   G R L   
Sbjct: 403 IASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQT 462

Query: 354 LSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLL 390
           +   K +  +L++  N IS +G   + E  K    +L
Sbjct: 463 V-LHKDEFKLLNVNGNFISEEGVDELKEIFKKSPEML 498


>gi|156366884|ref|XP_001627151.1| predicted protein [Nematostella vectensis]
 gi|156214052|gb|EDO35051.1| predicted protein [Nematostella vectensis]
          Length = 307

 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 131/268 (48%), Gaps = 32/268 (11%)

Query: 142 FTGKLFRESKQTLNEF--AKELRAFSS--VDMSGRNFGDEGLFFLAESLGYNQTAEEVSF 197
           F   +++++ +  N F  +K +R + +  +D+     GD+G   LA  L   + +  +  
Sbjct: 5   FIVAMYKDACKQYNTFPVSKFIRQYPTGVIDLKHYGVGDKGALALATVLKQGEVSS-LCL 63

Query: 198 AANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVD 257
             NGI   G++    +L +N  +K+L+LSGNP+    + CL  +L DN  +  L LS+  
Sbjct: 64  HDNGIGIEGLRCLSTMLTTNACIKSLDLSGNPVNKSSIACLGRMLSDNIFLYDLNLSTCG 123

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFT------------------------- 292
           ++ + A A+ E L+ ++ ++ L L+ N +   G T                         
Sbjct: 124 IQGKNAVALLEALRYHTSIKTLNLSYNDLGLEGATLIGLVLRDNKRLHYLDISWNNIRDT 183

Query: 293 -SLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALM 351
             +AE L+ N+ +  L L+ N  G  GA  L++ L  N +LREL++ G  IG  G++ L+
Sbjct: 184 DKIAEGLVTNTCLEILDLSRNGFGDRGAENLSQALLQNLTLRELNVSGACIGLAGVK-LI 242

Query: 352 SGLSSRKGKLAVLDIGNNSISAKGAFHV 379
           +G   R   L VL IGNN +  +GA  +
Sbjct: 243 AGSLKRNKVLEVLKIGNNPMLPEGAHEL 270



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 4/199 (2%)

Query: 357 RKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT 416
           R+    V+D+ +  +  KGA  +A  +K    +  + L+ N IG EG   ++  L  N  
Sbjct: 27  RQYPTGVIDLKHYGVGDKGALALATVLKQ-GEVSSLCLHDNGIGIEGLRCLSTMLTTNAC 85

Query: 417 ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTL 476
           I ++DL GN ++    + + R+L DN  +  L+L+   I    A AL E L++H +I TL
Sbjct: 86  IKSLDLSGNPVNKSSIACLGRMLSDNIFLYDLNLSTCGIQGKNAVALLEALRYHTSIKTL 145

Query: 477 KLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLA 536
            L +  +G  GA  +  +LR N  +  LD+  N +RD     +A+   V N  L  +DL+
Sbjct: 146 NLSYNDLGLEGATLIGLVLRDNKRLHYLDISWNNIRDTDK--IAEGL-VTNTCLEILDLS 202

Query: 537 FNEIRDDGAFAIAQALKAN 555
            N   D GA  ++QAL  N
Sbjct: 203 RNGFGDRGAENLSQALLQN 221



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 126/250 (50%), Gaps = 20/250 (8%)

Query: 222 TLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRD-----EGAKAIAELLKNNSIL 276
            ++L    +GD+G   L  +L      ++ ++SS+ L D     EG + ++ +L  N+ +
Sbjct: 33  VIDLKHYGVGDKGALALATVL------KQGEVSSLCLHDNGIGIEGLRCLSTMLTTNACI 86

Query: 277 RVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALA--KGLEGNKSLRE 334
           + L+L+ N ++ S    L   L +N  +  L+L+    G  G NA+A  + L  + S++ 
Sbjct: 87  KSLDLSGNPVNKSSIACLGRMLSDNIFLYDLNLS--TCGIQGKNAVALLEALRYHTSIKT 144

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGK-LAVLDIGNNSISAKGAFHVAEYIKNCKSLLWIN 393
           L+L  N +G EG  A + GL  R  K L  LDI  N+I  +    +AE +     L  ++
Sbjct: 145 LNLSYNDLGLEG--ATLIGLVLRDNKRLHYLDISWNNI--RDTDKIAEGLVTNTCLEILD 200

Query: 394 LYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYN 453
           L  N  GD GAE ++ AL QN T+  +++ G  I   G   IA  LK N V+  L +  N
Sbjct: 201 LSRNGFGDRGAENLSQALLQNLTLRELNVSGACIGLAGVKLIAGSLKRNKVLEVLKIGNN 260

Query: 454 PIGADGAKAL 463
           P+  +GA  L
Sbjct: 261 PMLPEGAHEL 270



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 4/239 (1%)

Query: 278 VLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHL 337
           V++L +  +   G  +LA  +L+   + SL L+ N  G  G   L+  L  N  ++ L L
Sbjct: 33  VIDLKHYGVGDKGALALA-TVLKQGEVSSLCLHDNGIGIEGLRCLSTMLTTNACIKSLDL 91

Query: 338 HGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMN 397
            GN +    I  L   LS     L  L++    I  K A  + E ++   S+  +NL  N
Sbjct: 92  SGNPVNKSSIACLGRMLSDNI-FLYDLNLSTCGIQGKNAVALLEALRYHTSIKTLNLSYN 150

Query: 398 DIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGA 457
           D+G EGA  I   L+ N+ +  +D+  NNI  +    IA  L  N+ +  LDL+ N  G 
Sbjct: 151 DLGLEGATLIGLVLRDNKRLHYLDISWNNI--RDTDKIAEGLVTNTCLEILDLSRNGFGD 208

Query: 458 DGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGA 516
            GA+ LS+ L  +  +  L +    IG +G + +A  L+ N  + +L +  N +  EGA
Sbjct: 209 RGAENLSQALLQNLTLRELNVSGACIGLAGVKLIAGSLKRNKVLEVLKIGNNPMLPEGA 267



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 2/189 (1%)

Query: 163 AFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGVLQSNIALKT 222
              S+D+SG       +  L   L  N    +++ +  GI      A    L+ + ++KT
Sbjct: 85  CIKSLDLSGNPVNKSSIACLGRMLSDNIFLYDLNLSTCGIQGKNAVALLEALRYHTSIKT 144

Query: 223 LNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELN 282
           LNLS N +G EG   +  +L DN  +  L +S  ++RD     IAE L  N+ L +L+L+
Sbjct: 145 LNLSYNDLGLEGATLIGLVLRDNKRLHYLDISWNNIRD--TDKIAEGLVTNTCLEILDLS 202

Query: 283 NNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 342
            N     G  +L++ALL+N T+R L+++G   G  G   +A  L+ NK L  L +  N +
Sbjct: 203 RNGFGDRGAENLSQALLQNLTLRELNVSGACIGLAGVKLIAGSLKRNKVLEVLKIGNNPM 262

Query: 343 GDEGIRALM 351
             EG   L+
Sbjct: 263 LPEGAHELL 271


>gi|296234546|ref|XP_002762502.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 12 isoform 1
            [Callithrix jacchus]
          Length = 1063

 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 143/314 (45%), Gaps = 8/314 (2%)

Query: 214  LQSNIALKTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKN 272
            L +N  L  L L  N +G  GVK LC  L   N  ++ L+L    +     + +A  L  
Sbjct: 711  LCTNPNLIELALYRNALGSRGVKLLCQGLRHPNCKLQNLRLKRCGISSSACEDLATALIA 770

Query: 273  NSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGALGANALAKGLEGNKS 331
            N  L  L+L++N I   G T L E L      ++ L L      +     +A  L  N  
Sbjct: 771  NRNLTRLDLSSNGIGLPGMTLLCEGLRHPRCRLQMLQLRKCQLESGACQEMASVLSTNPH 830

Query: 332  LRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLW 391
            L EL L GN++ D G+R L  GL     +L  L +    ++A     +A  +   +SL  
Sbjct: 831  LVELDLTGNALEDLGLRFLCQGLRHPVCRLQTLWLKICHLTAPACEGLASTLSVNQSLTE 890

Query: 392  INLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDL 450
            ++L +ND+GD GA  + + L+     + T+ LG   + +     ++ VL+ N  +  LDL
Sbjct: 891  LDLSLNDLGDPGALLLCEGLRHATCKLQTLRLGICRLGAGACEGLSAVLQANPHLRELDL 950

Query: 451  AYNPIGADGAKALSEVLKFHGNINTLKLGW---CQIGASGAEFVADMLRYNNTISILDLR 507
            ++N +G  G   L+E L+ H      KL W   C + A   + +   L  N T++ L L 
Sbjct: 951  SFNDLGDWGLWLLAEGLQ-HPTCRLRKL-WLDSCGLTAKACKSLYFTLGVNQTLTELYLT 1008

Query: 508  ANGLRDEGAKCLAQ 521
             N L D G + L +
Sbjct: 1009 HNALGDTGVQLLCK 1022



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 131/302 (43%), Gaps = 4/302 (1%)

Query: 174  FGDEGLFFLAESLGY-NQTAEEVSFAANGITAAGIKAFDGVLQSNIALKTLNLSGNPIGD 232
             G  G+  L + L + N   + +     GI+++  +     L +N  L  L+LS N IG 
Sbjct: 727  LGSRGVKLLCQGLRHPNCKLQNLRLKRCGISSSACEDLATALIANRNLTRLDLSSNGIGL 786

Query: 233  EGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNNMIDYSGF 291
             G+  LC+ L      ++ LQL    L     + +A +L  N  L  L+L  N ++  G 
Sbjct: 787  PGMTLLCEGLRHPRCRLQMLQLRKCQLESGACQEMASVLSTNPHLVELDLTGNALEDLGL 846

Query: 292  TSLAEALLEN-STIRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRAL 350
              L + L      +++L L   +  A     LA  L  N+SL EL L  N +GD G   L
Sbjct: 847  RFLCQGLRHPVCRLQTLWLKICHLTAPACEGLASTLSVNQSLTELDLSLNDLGDPGALLL 906

Query: 351  MSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADA 410
              GL     KL  L +G   + A     ++  ++    L  ++L  ND+GD G   +A+ 
Sbjct: 907  CEGLRHATCKLQTLRLGICRLGAGACEGLSAVLQANPHLRELDLSFNDLGDWGLWLLAEG 966

Query: 411  LKQNRT-ITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF 469
            L+     +  + L    + +K   ++   L  N  +T L L +N +G  G + L + L  
Sbjct: 967  LQHPTCRLRKLWLDSCGLTAKACKSLYFTLGVNQTLTELYLTHNALGDTGVQLLCKRLSH 1026

Query: 470  HG 471
             G
Sbjct: 1027 PG 1028



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 3/270 (1%)

Query: 258 LRDEGAKAIAELLKNNSILRVLELNNNMIDYSGFTSLAEALLE-NSTIRSLHLNGNYGGA 316
           L D  ++ +A  L  N  L  L L  N +   G   L + L   N  +++L L      +
Sbjct: 699 LLDAYSEHLAVALCTNPNLIELALYRNALGSRGVKLLCQGLRHPNCKLQNLRLKRCGISS 758

Query: 317 LGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGA 376
                LA  L  N++L  L L  N IG  G+  L  GL   + +L +L +    + +   
Sbjct: 759 SACEDLATALIANRNLTRLDLSSNGIGLPGMTLLCEGLRHPRCRLQMLQLRKCQLESGAC 818

Query: 377 FHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAI 435
             +A  +     L+ ++L  N + D G   +   L+     + T+ L   ++ +     +
Sbjct: 819 QEMASVLSTNPHLVELDLTGNALEDLGLRFLCQGLRHPVCRLQTLWLKICHLTAPACEGL 878

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKF-HGNINTLKLGWCQIGASGAEFVADM 494
           A  L  N  +T LDL+ N +G  GA  L E L+     + TL+LG C++GA   E ++ +
Sbjct: 879 ASTLSVNQSLTELDLSLNDLGDPGALLLCEGLRHATCKLQTLRLGICRLGAGACEGLSAV 938

Query: 495 LRYNNTISILDLRANGLRDEGAKCLAQSFK 524
           L+ N  +  LDL  N L D G   LA+  +
Sbjct: 939 LQANPHLRELDLSFNDLGDWGLWLLAEGLQ 968



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 30/265 (11%)

Query: 319 ANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFH 378
           +  LA  L  N +L EL L+ N++G  G++ L  GL     KL  L +    IS+     
Sbjct: 704 SEHLAVALCTNPNLIELALYRNALGSRGVKLLCQGLRHPNCKLQNLRLKRCGISSSACED 763

Query: 379 VAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRT-ITTIDLGGNNIHSKGASAIAR 437
           +A  +   ++L  ++L  N IG  G   + + L+  R  +  + L    + S     +A 
Sbjct: 764 LATALIANRNLTRLDLSSNGIGLPGMTLLCEGLRHPRCRLQMLQLRKCQLESGACQEMAS 823

Query: 438 VLKDNSVITSLDLAYNPIGADGAKALSEVLKFH-GNINTLKLGWCQIGASGAEFVADMLR 496
           VL  N  +  LDL  N +   G + L + L+     + TL L  C + A   E +A  L 
Sbjct: 824 VLSTNPHLVELDLTGNALEDLGLRFLCQGLRHPVCRLQTLWLKICHLTAPACEGLASTLS 883

Query: 497 YNNTISILDLRANGLRDEGA----------KCLAQSFKV------------------VNE 528
            N +++ LDL  N L D GA           C  Q+ ++                   N 
Sbjct: 884 VNQSLTELDLSLNDLGDPGALLLCEGLRHATCKLQTLRLGICRLGAGACEGLSAVLQANP 943

Query: 529 ALTSIDLAFNEIRDDGAFAIAQALK 553
            L  +DL+FN++ D G + +A+ L+
Sbjct: 944 HLRELDLSFNDLGDWGLWLLAEGLQ 968



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 3/201 (1%)

Query: 167  VDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIALKTLNL 225
            +D++G    D GL FL + L +     + +      +TA   +     L  N +L  L+L
Sbjct: 834  LDLTGNALEDLGLRFLCQGLRHPVCRLQTLWLKICHLTAPACEGLASTLSVNQSLTELDL 893

Query: 226  SGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVLELNNN 284
            S N +GD G   LC+ L      ++ L+L    L     + ++ +L+ N  LR L+L+ N
Sbjct: 894  SLNDLGDPGALLLCEGLRHATCKLQTLRLGICRLGAGACEGLSAVLQANPHLRELDLSFN 953

Query: 285  MIDYSGFTSLAEALLENST-IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG 343
             +   G   LAE L   +  +R L L+     A    +L   L  N++L EL+L  N++G
Sbjct: 954  DLGDWGLWLLAEGLQHPTCRLRKLWLDSCGLTAKACKSLYFTLGVNQTLTELYLTHNALG 1013

Query: 344  DEGIRALMSGLSSRKGKLAVL 364
            D G++ L   LS    KL VL
Sbjct: 1014 DTGVQLLCKRLSHPGCKLRVL 1034



 Score = 46.2 bits (108), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 2/139 (1%)

Query: 162  RAFSSVDMSGRNFGDEGLFFLAESLGYNQTA-EEVSFAANGITAAGIKAFDGVLQSNIAL 220
            ++ + +D+S  + GD G   L E L +     + +      + A   +    VLQ+N  L
Sbjct: 886  QSLTELDLSLNDLGDPGALLLCEGLRHATCKLQTLRLGICRLGAGACEGLSAVLQANPHL 945

Query: 221  KTLNLSGNPIGDEGVKCLCDILVD-NAGVERLQLSSVDLRDEGAKAIAELLKNNSILRVL 279
            + L+LS N +GD G+  L + L      + +L L S  L  +  K++   L  N  L  L
Sbjct: 946  RELDLSFNDLGDWGLWLLAEGLQHPTCRLRKLWLDSCGLTAKACKSLYFTLGVNQTLTEL 1005

Query: 280  ELNNNMIDYSGFTSLAEAL 298
             L +N +  +G   L + L
Sbjct: 1006 YLTHNALGDTGVQLLCKRL 1024


>gi|290970038|ref|XP_002668017.1| predicted protein [Naegleria gruberi]
 gi|284081041|gb|EFC35273.1| predicted protein [Naegleria gruberi]
          Length = 306

 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 129/246 (52%), Gaps = 34/246 (13%)

Query: 304 IRSLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAV 363
           + SL ++ N  G  G     K + G K L  L +  N   DEG + +     S   +L  
Sbjct: 79  LTSLDISFNQIGVQGV----KFISGMKQLTSLDISFNQASDEGAKYI-----SEMKQLTS 129

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           L I  N I  +GA    +YI   K L  +NLY N+I DEGA+ I++       +T++D+ 
Sbjct: 130 LGISKNLIGDEGA----KYISEMKQLTSLNLYYNEICDEGAKYISEM----EQLTSLDIS 181

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
            N I  +G     + +K+   +TSL++ YN IG +GAK +SE+      + +L +   +I
Sbjct: 182 SNLIDVEG----VKFIKEMKQLTSLNIYYNGIGVEGAKYISEM----KQLTSLNITNNEI 233

Query: 484 GASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDD 543
           G  GA+++++M      IS++ +  N + DEGAK + +      E LTS++++ NEI D+
Sbjct: 234 GDEGAKYISEM---KQLISLI-ISRNQIGDEGAKYICEM-----EQLTSLNISGNEIGDE 284

Query: 544 GAFAIA 549
           GA  I+
Sbjct: 285 GAKYIS 290



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 137/268 (51%), Gaps = 39/268 (14%)

Query: 156 EFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQ-TAEEVSFAANGITAAGIKAFDGVL 214
           +F  +++  +S+D+S    G +G+ F++   G  Q T+ ++SF  N  +  G K    + 
Sbjct: 71  KFISDMKRLTSLDISFNQIGVQGVKFIS---GMKQLTSLDISF--NQASDEGAKYISEMK 125

Query: 215 QSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNNS 274
           Q    L +L +S N IGDEG K + ++      +  L L   ++ DEGAK I+E+ +   
Sbjct: 126 Q----LTSLGISKNLIGDEGAKYISEM----KQLTSLNLYYNEICDEGAKYISEMEQ--- 174

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L++++N+ID  G   + E       + SL++  N  G  GA  +++     K L  
Sbjct: 175 -LTSLDISSNLIDVEGVKFIKEM----KQLTSLNIYYNGIGVEGAKYISEM----KQLTS 225

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L++  N IGDEG + +     S   +L  L I  N I  +GA ++ E     + L  +N+
Sbjct: 226 LNITNNEIGDEGAKYI-----SEMKQLISLIISRNQIGDEGAKYICE----MEQLTSLNI 276

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDL 422
             N+IGDEGA+ I+D     + +T++D+
Sbjct: 277 SGNEIGDEGAKYISDM----KQLTSLDI 300



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 130/252 (51%), Gaps = 43/252 (17%)

Query: 220 LKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLR-----DEGAKAIAELLKNNS 274
           L +L++S N IG +GVK +       +G++  QL+S+D+      DEGAK I+E+ +   
Sbjct: 79  LTSLDISFNQIGVQGVKFI-------SGMK--QLTSLDISFNQASDEGAKYISEMKQ--- 126

Query: 275 ILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGNKSLRE 334
            L  L ++ N+I   G    A+ + E   + SL+L  N     GA  +++     + L  
Sbjct: 127 -LTSLGISKNLIGDEG----AKYISEMKQLTSLNLYYNEICDEGAKYISEM----EQLTS 177

Query: 335 LHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINL 394
           L +  N I  EG++ +         +L  L+I  N I  +GA    +YI   K L  +N+
Sbjct: 178 LDISSNLIDVEGVKFI-----KEMKQLTSLNIYYNGIGVEGA----KYISEMKQLTSLNI 228

Query: 395 YMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNP 454
             N+IGDEGA+ I++     + + ++ +  N I  +GA  I  + +    +TSL+++ N 
Sbjct: 229 TNNEIGDEGAKYISEM----KQLISLIISRNQIGDEGAKYICEMEQ----LTSLNISGNE 280

Query: 455 IGADGAKALSEV 466
           IG +GAK +S++
Sbjct: 281 IGDEGAKYISDM 292



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 118/243 (48%), Gaps = 43/243 (17%)

Query: 360 KLAVLDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITT 419
           +L  LDI  N I  +G     ++I   K L  +++  N   DEGA+ I++     + +T+
Sbjct: 78  RLTSLDISFNQIGVQGV----KFISGMKQLTSLDISFNQASDEGAKYISEM----KQLTS 129

Query: 420 IDLGGNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLG 479
           + +  N I  +GA  I+ + +    +TSL+L YN I  +GAK +SE+      + +L + 
Sbjct: 130 LGISKNLIGDEGAKYISEMKQ----LTSLNLYYNEICDEGAKYISEM----EQLTSLDIS 181

Query: 480 WCQIGASGAEFVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNE 539
              I   G +F+ +M      ++ L++  NG+  EGAK +++      + LTS+++  NE
Sbjct: 182 SNLIDVEGVKFIKEM----KQLTSLNIYYNGIGVEGAKYISEM-----KQLTSLNITNNE 232

Query: 540 IRDDGAFAIAQ------------------ALKANEDVAVTSLNLANNFLTKFGQSALTDA 581
           I D+GA  I++                  A    E   +TSLN++ N +   G   ++D 
Sbjct: 233 IGDEGAKYISEMKQLISLIISRNQIGDEGAKYICEMEQLTSLNISGNEIGDEGAKYISDM 292

Query: 582 KDL 584
           K L
Sbjct: 293 KQL 295



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 112/210 (53%), Gaps = 27/210 (12%)

Query: 376 AFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAI 435
           +F   ++I + K L  +++  N IG +G  K    +KQ   +T++D+  N    +GA  I
Sbjct: 66  SFEKLKFISDMKRLTSLDISFNQIGVQGV-KFISGMKQ---LTSLDISFNQASDEGAKYI 121

Query: 436 ARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADML 495
           + + +    +TSL ++ N IG +GAK +SE+      + +L L + +I   GA+++++M 
Sbjct: 122 SEMKQ----LTSLGISKNLIGDEGAKYISEM----KQLTSLNLYYNEICDEGAKYISEM- 172

Query: 496 RYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKAN 555
                ++ LD+ +N +  EG K + +      + LTS+++ +N I  +GA  I++  +  
Sbjct: 173 ---EQLTSLDISSNLIDVEGVKFIKEM-----KQLTSLNIYYNGIGVEGAKYISEMKQ-- 222

Query: 556 EDVAVTSLNLANNFLTKFGQSALTDAKDLV 585
               +TSLN+ NN +   G   +++ K L+
Sbjct: 223 ----LTSLNITNNEIGDEGAKYISEMKQLI 248


>gi|289666782|ref|NP_001166251.1| leucine-rich repeat-containing protein 34 isoform 1 [Homo sapiens]
          Length = 361

 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 10/232 (4%)

Query: 364 LDIGNNSISAKGAFHVAEYIKNCKSLLWINLYMNDIGDEGAEKIADALKQNRTITTIDLG 423
           LD+G N +   GA++ A+ ++   +L+++NL  NDIG EG E IA  L +NRT+  + + 
Sbjct: 128 LDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMT 187

Query: 424 GNNIHSKGASAIARVLKDNSVITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQI 483
           GN I +KG    A +L+ NS +  LDL    +G     A + VL  +  I  + L    +
Sbjct: 188 GNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNQAIKAINLNRPIL 247

Query: 484 GASGAE---FVADMLRYNNTISILDLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEI 540
            +   E    V  ML+ N+ +  L +  + +++ G + L  +   +N +L  +D++ N+I
Sbjct: 248 YSEQEESTVHVGRMLKENHCLVALHMCKHDIKNSGIQQLCDAL-YLNSSLRYLDVSCNKI 306

Query: 541 RDDGAFAIAQALKANEDVAVTSL------NLANNFLTKFGQSALTDAKDLVY 586
             DG   +A  LK+N  + V  L      N   N+L++   S     K LV+
Sbjct: 307 THDGMVYLADVLKSNTTLEVIDLSFNRIENAGANYLSETLTSHNRSLKALVW 358



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 10/246 (4%)

Query: 154 LNEFAKELRAFSSVDMSGRNFGDEGLFFLAESLGYNQTAEEVSFAANGITAAGIKAFDGV 213
           L++  K     + +D+      D G ++ A+ L        ++   N I   G +    V
Sbjct: 115 LSKILKNCLYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKV 174

Query: 214 LQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKNN 273
           L  N  LK L ++GN I ++G      +L  N+ +E+L L   DL  +   A A +L  N
Sbjct: 175 LHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQN 234

Query: 274 SILRVLELNNNMIDYS----GFTSLAEALLENSTIRSLHLNGNYGGALGANALAKGLEGN 329
             ++ + LN  ++ YS        +   L EN  + +LH+  +     G   L   L  N
Sbjct: 235 QAIKAINLNRPIL-YSEQEESTVHVGRMLKENHCLVALHMCKHDIKNSGIQQLCDALYLN 293

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYI----KN 385
            SLR L +  N I  +G+  L   L S    L V+D+  N I   GA +++E +    ++
Sbjct: 294 SSLRYLDVSCNKITHDGMVYLADVLKSNT-TLEVIDLSFNRIENAGANYLSETLTSHNRS 352

Query: 386 CKSLLW 391
            K+L+W
Sbjct: 353 LKALVW 358



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 32/230 (13%)

Query: 213 VLQSNIALKTLNLSGNPIGDEGVKCLCDILVDNAGVERLQLSSVDLRDEGAKAIAELLKN 272
           +LQ  + L  LNL  N IG EG + +  +L  N  ++ L+++   + ++G    A +L+ 
Sbjct: 146 LLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQI 205

Query: 273 NSILRVLELNNNMIDYSGFTSLAEALLENSTIRSLHLNGN--YGGALGANA-LAKGLEGN 329
           NS L  L+L +  +      + A  L +N  I++++LN    Y     +   + + L+ N
Sbjct: 206 NSSLEKLDLGDCDLGMQSVIAFATVLTQNQAIKAINLNRPILYSEQEESTVHVGRMLKEN 265

Query: 330 KSLRELHLHGNSIGDEGIRALMSGLSSRKGKLAVLDIGNNSISAKGAFHVAEYIKNCKSL 389
             L  LH+  + I + GI+ L   L                           Y+ +  SL
Sbjct: 266 HCLVALHMCKHDIKNSGIQQLCDAL---------------------------YLNS--SL 296

Query: 390 LWINLYMNDIGDEGAEKIADALKQNRTITTIDLGGNNIHSKGASAIARVL 439
            ++++  N I  +G   +AD LK N T+  IDL  N I + GA+ ++  L
Sbjct: 297 RYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGANYLSETL 346



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 11/180 (6%)

Query: 392 INLYMNDIGDEGAEKIADALKQNRTITTIDLGGNN-------IHSKGASAIARVLKDNSV 444
           IN ++  I  E  E+I   L       T+++ GNN       +  +    ++++LK+   
Sbjct: 68  INPFILHILQEVDEEIKKGLAAG---ITLNIAGNNRLVPVERVTGEDFWILSKILKNCLY 124

Query: 445 ITSLDLAYNPIGADGAKALSEVLKFHGNINTLKLGWCQIGASGAEFVADMLRYNNTISIL 504
           I  LD+ YN +   GA   +++L+   N+  L L +  IG  G E +A +L  N T+  L
Sbjct: 125 INGLDVGYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYL 184

Query: 505 DLRANGLRDEGAKCLAQSFKVVNEALTSIDLAFNEIRDDGAFAIAQALKANEDVAVTSLN 564
            +  N + ++G    A   + +N +L  +DL   ++      A A  L  N+ +   +LN
Sbjct: 185 RMTGNKIENKGGMFFAAMLQ-INSSLEKLDLGDCDLGMQSVIAFATVLTQNQAIKAINLN 243


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.133    0.373 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,678,777,958
Number of Sequences: 23463169
Number of extensions: 359057907
Number of successful extensions: 1131523
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4456
Number of HSP's successfully gapped in prelim test: 4161
Number of HSP's that attempted gapping in prelim test: 1018528
Number of HSP's gapped (non-prelim): 46603
length of query: 597
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 449
effective length of database: 8,886,646,355
effective search space: 3990104213395
effective search space used: 3990104213395
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)