BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007583
(597 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359497260|ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like,
partial [Vitis vinifera]
Length = 555
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/568 (69%), Positives = 462/568 (81%), Gaps = 28/568 (4%)
Query: 44 KDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDF 103
K+D ++ +LFNRDP PP+LF+VQPRL+P T LQAKL+EA+ LANSLEEQRDGY+DT+
Sbjct: 2 KEDPYNDASLFNRDPKSPPKLFVVQPRLRPDTLLQAKLDEAINLANSLEEQRDGYYDTEL 61
Query: 104 FDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGI 163
+K LPPHVVVQNP+++S K R+DT+FGPGTV+T+KCH+N ESKGE+DA++VN ILSGI
Sbjct: 62 CEKGLPPHVVVQNPAVRSSKYRSDTYFGPGTVDTVKCHLNAVESKGEIDAVYVNTILSGI 121
Query: 164 QQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLT 223
QQRNLERAWGKPVLDRVGLIIEIFNAHA TKEAKLQAELAALMYK++RLVRVRGPDGR T
Sbjct: 122 QQRNLERAWGKPVLDRVGLIIEIFNAHAQTKEAKLQAELAALMYKRTRLVRVRGPDGRYT 181
Query: 224 FGETGEAEVVSARG----RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTR 279
FG TGE EVVSARG RGSGGRGFISGAGETELQLQRRRILERR+HLLSQIE VRRTR
Sbjct: 182 FGATGETEVVSARGVHHRRGSGGRGFISGAGETELQLQRRRILERRNHLLSQIEAVRRTR 241
Query: 280 AVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSV 339
A+QRA+R+R GGS+G+GLATVA+VGYTNAGKSTLVSALS+SDLFSD RLFAT+DPRL+SV
Sbjct: 242 ALQRASRKRRGGSNGQGLATVAIVGYTNAGKSTLVSALSESDLFSDDRLFATVDPRLRSV 301
Query: 340 VLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVL 399
+LPSGRKVLLSDTVGFISDLP+QLV+AFHATLEEVVEADLLVHVLD +A +L+E R+ VL
Sbjct: 302 ILPSGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVLDSSASDLDEQRSVVL 361
Query: 400 QVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID-GDD--ISNFSRAEDKDTTSEPV 456
QVLQQ+GVSEEKL+NM+EVWNKID +EEMG +Y+D G+D + + S AED D SE +
Sbjct: 362 QVLQQIGVSEEKLQNMLEVWNKIDLQEEEMGADKYLDNGEDDVVDSLSGAEDDDMPSE-L 420
Query: 457 DVECIDNYGGDDADNNDGFVSE----DLGESMNKNHNDYSDGWLL---SGDEQDNVEEEF 509
E + DD D ND VSE D+ E+M+ + DYSDGWL G E D
Sbjct: 421 PAEPV-----DDDDEND-IVSELSSGDVQETMDDHEGDYSDGWLSRGGEGSEDDQGNPSR 474
Query: 510 WNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQ 569
W +DQQ ES KD + EKDS SQ Q P VK SA GVGLQELL +IDE+L+T Q
Sbjct: 475 WKTMDDQQSESFKDRRMTEKDSCSQPQCIPHVKTSAVMGVGLQELLALIDEKLET----Q 530
Query: 570 KSPNVVERDFFNKKWRPPRTEDSSVAVE 597
K P ER++F++KWRPP TED VAVE
Sbjct: 531 KVP---ERNYFDRKWRPPHTEDVGVAVE 555
>gi|255579523|ref|XP_002530604.1| GTP-binding protein hflx, putative [Ricinus communis]
gi|223529852|gb|EEF31784.1| GTP-binding protein hflx, putative [Ricinus communis]
Length = 625
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/590 (67%), Positives = 472/590 (80%), Gaps = 22/590 (3%)
Query: 15 SITQTLTFPISLHSYSYSS-SKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKP 73
+++QTLT S ++S S +Q + N ++ D H VV++ NRDP PPRLF+VQPRL+P
Sbjct: 17 ALSQTLTIINPHQSITHSQFSSKQHQQNSNEIDTHGVVSIINRDPTSPPRLFVVQPRLRP 76
Query: 74 PTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPG 133
+FLQAKLNEALCLANSLEEQRDGYFDTDFFDK LPPHV+VQNP L+S +ARADTFFGPG
Sbjct: 77 DSFLQAKLNEALCLANSLEEQRDGYFDTDFFDKALPPHVIVQNPILRSSRARADTFFGPG 136
Query: 134 TVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHT 193
TV TIKCH+N +ESKGE+DA+FVN++L+G+QQRNLERAWG+PVLDRVGLIIEIFNAHAHT
Sbjct: 137 TVNTIKCHLNASESKGEVDAVFVNSVLTGVQQRNLERAWGRPVLDRVGLIIEIFNAHAHT 196
Query: 194 KEAKLQAELAALMYKKSRLVRVRGPDGRLT----FGETGEAEVVSARGRGSGGRGFISGA 249
KEAKLQ+ELAALMYKKSRLVR RG DGR T F + E+ RGSGGRGFISGA
Sbjct: 197 KEAKLQSELAALMYKKSRLVRARGLDGRYTXLLQFLRL-KIEI----WRGSGGRGFISGA 251
Query: 250 GETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAG 309
GETELQLQRRRILERR++LLSQI EVRRTRAVQRAAR+R G +GLATVAVVGYTNAG
Sbjct: 252 GETELQLQRRRILERRNYLLSQIREVRRTRAVQRAARKRDDGLHNKGLATVAVVGYTNAG 311
Query: 310 KSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHA 369
KST+VS LS+SDL+SD+RLFATLDPRLKSVVLPSGRKVL SDTVGFISDLP+QLV+AF A
Sbjct: 312 KSTMVSTLSNSDLYSDSRLFATLDPRLKSVVLPSGRKVLFSDTVGFISDLPVQLVEAFRA 371
Query: 370 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEM 429
TLEEVVEADLLVHV+D TAPNLEEH TTVLQVLQQ+GVS+EKL++MIEVWNKIDY +EEM
Sbjct: 372 TLEEVVEADLLVHVIDSTAPNLEEHHTTVLQVLQQIGVSKEKLQSMIEVWNKIDYEEEEM 431
Query: 430 GDVEYIDGDDI--SNFSRAEDKDTTSEPVDVECIDNYGGD--DADNNDGFVSEDLGESMN 485
DV++ DD+ S++S ED D SE + DN G + +A N +G D+ E+++
Sbjct: 432 -DVDH-SADDVDGSSWSGDEDDDIASE-ISSRIEDNKGNNCLEAQNGEG----DIEETLD 484
Query: 486 KNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVKISA 545
+YSDGWLLSGDE++ V + + +DQQ +++ + V KD SQ +H P VK SA
Sbjct: 485 SVEGEYSDGWLLSGDERELVGDNWLKTLDDQQCKASDNPGV-GKDILSQAEHGPHVKTSA 543
Query: 546 RTGVGLQELLEIIDERLKTLDDKQKSPNVVERDFFNKKWRPPRTEDSSVA 595
TGVGLQELL ++DERLKT D+ K+ NVV RD F +KWRP R +D+ A
Sbjct: 544 ITGVGLQELLVLVDERLKTQDEMLKAQNVVGRDLFYRKWRPSRADDTEAA 593
>gi|296084742|emb|CBI25886.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/595 (65%), Positives = 458/595 (76%), Gaps = 62/595 (10%)
Query: 11 TQLRSITQTLTFP-ISLHSYSYSSSKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQP 69
T SI L FP IS+ S S+S QT + K+D ++ +LFNRDP PP+LF+VQP
Sbjct: 40 TNPSSIPPNLQFPPISILSSSFS----QTPLLQKKEDPYNDASLFNRDPKSPPKLFVVQP 95
Query: 70 RLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTF 129
RL+P T LQAKL+EA+ LANSLEEQRDGY+DT+ +K LPPHVVVQNP+++S K R+DT+
Sbjct: 96 RLRPDTLLQAKLDEAINLANSLEEQRDGYYDTELCEKGLPPHVVVQNPAVRSSKYRSDTY 155
Query: 130 FGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNA 189
FGPGTV+T+KCH+N ESKGE+DA++VN ILSGIQQRNLERAWGKPVLDRVGLIIEIFNA
Sbjct: 156 FGPGTVDTVKCHLNAVESKGEIDAVYVNTILSGIQQRNLERAWGKPVLDRVGLIIEIFNA 215
Query: 190 HAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGA 249
HA TKEAKLQAELAALMYK++RLVRVRGPDGR TFG TGE EVVSARGRGSGGRGFISGA
Sbjct: 216 HAQTKEAKLQAELAALMYKRTRLVRVRGPDGRYTFGATGETEVVSARGRGSGGRGFISGA 275
Query: 250 GETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAG 309
GETELQLQRRRILERR+HLLSQIE VRRTRA+QRA+R+R GGS+G+GLATVA+VGYTNAG
Sbjct: 276 GETELQLQRRRILERRNHLLSQIEAVRRTRALQRASRKRRGGSNGQGLATVAIVGYTNAG 335
Query: 310 KSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHA 369
KSTLVSALS+SDLFSD RLFAT+DPRL+SV+LPSGRKVLLSDTVGFISDLP+QLV+AFHA
Sbjct: 336 KSTLVSALSESDLFSDDRLFATVDPRLRSVILPSGRKVLLSDTVGFISDLPVQLVEAFHA 395
Query: 370 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEM 429
TLEEVVEADLLVHVLD +A +L+E R+ VLQVLQQ+GVSEEKL+NM+EVWNKID +EEM
Sbjct: 396 TLEEVVEADLLVHVLDSSASDLDEQRSVVLQVLQQIGVSEEKLQNMLEVWNKIDLQEEEM 455
Query: 430 GDVEYIDG---DDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE----DLGE 482
G +Y+D D + + S AED D SE + E +D D D ND VSE D+ E
Sbjct: 456 GADKYLDNGEDDVVDSLSGAEDDDMPSE-LPAEPVD-----DDDEND-IVSELSSGDVQE 508
Query: 483 SMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVK 542
+M+ + DYSD DS SQ Q P VK
Sbjct: 509 TMDDHEGDYSD------------------------------------DSCSQPQCIPHVK 532
Query: 543 ISARTGVGLQELLEIIDERLKTLDDKQKSPNVVERDFFNKKWRPPRTEDSSVAVE 597
SA GVGLQELL +IDE+L+T QK P ER++F++KWRPP TED VAVE
Sbjct: 533 TSAVMGVGLQELLALIDEKLET----QKVP---ERNYFDRKWRPPHTEDVGVAVE 580
>gi|449438863|ref|XP_004137207.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like
[Cucumis sativus]
Length = 593
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/567 (66%), Positives = 444/567 (78%), Gaps = 20/567 (3%)
Query: 24 ISLHSYSYSSSKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNE 83
I + S +S S + K+ D DDL +LFNRD PP+LF+VQPRL+P TFLQAKLNE
Sbjct: 45 ILILSSPFSHSSKHKKE--DSDDL----SLFNRDLTAPPKLFVVQPRLRPYTFLQAKLNE 98
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
ALCLANSLEEQRDGYF DFFDK++PP+VVVQNPS++ ARADT+FGPGTV+TIKCH+N
Sbjct: 99 ALCLANSLEEQRDGYFHIDFFDKDVPPYVVVQNPSVRG--ARADTYFGPGTVDTIKCHLN 156
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
AESK E+DAIFVNA LSG QQRNLE AW KPVLDRVGLIIEIFNAHA+TKEAKLQAELA
Sbjct: 157 AAESKSEVDAIFVNATLSGSQQRNLEWAWNKPVLDRVGLIIEIFNAHAYTKEAKLQAELA 216
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
ALMYKKSRLVRVRG DGR FG GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE
Sbjct: 217 ALMYKKSRLVRVRGLDGRYAFGARGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 276
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
RR+HL SQIEEVRRTR++QRA+R+RHGGS+G+ LATVAVVGYTNAGKSTLVSALSD+DL+
Sbjct: 277 RRNHLYSQIEEVRRTRSLQRASRKRHGGSNGQHLATVAVVGYTNAGKSTLVSALSDNDLY 336
Query: 324 SDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 383
SD+RLFAT+DPRL+SV LPSGRKV+LSDTVGFISDLP+QLV+AFHATLEEVVEADLLVHV
Sbjct: 337 SDSRLFATVDPRLRSVFLPSGRKVVLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHV 396
Query: 384 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNF 443
+DCTAPNL+EHR+TVLQVLQQ+GVS+ KL++M+EVWNKIDYH E E I DD +
Sbjct: 397 VDCTAPNLDEHRSTVLQVLQQIGVSKMKLQDMVEVWNKIDYHQEG----ESI--DDSCDD 450
Query: 444 SRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQD 503
E +++ E N G + + V + G+ K + G + G E D
Sbjct: 451 DNGEAANSSGED------SNEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNRMEGQESD 504
Query: 504 NVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLK 563
++ + EDQ P + K + E S DQ P V+ISAR GVGL ELL++ID +LK
Sbjct: 505 CCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLK 564
Query: 564 TLDDKQKSPNVVERDFFNKKWRPPRTE 590
D+K ++ NV+ER+ F++KWRP + E
Sbjct: 565 VQDEKLQAQNVLERNVFDRKWRPSQME 591
>gi|357493997|ref|XP_003617287.1| GTP-binding protein [Medicago truncatula]
gi|355518622|gb|AET00246.1| GTP-binding protein [Medicago truncatula]
Length = 591
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/540 (67%), Positives = 429/540 (79%), Gaps = 34/540 (6%)
Query: 59 DDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPS 118
D PP+L +VQPRL+ LQAKLNEALCLANSLE+QRDGYF TDFFD LPPHV+VQNPS
Sbjct: 38 DAPPKLLVVQPRLRSEKLLQAKLNEALCLANSLEDQRDGYFHTDFFDLPLPPHVIVQNPS 97
Query: 119 LKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLD 178
LK KARADT+FGPGTV+TIKCH+N ESKGE+DA+FVNAILSGIQ RN+ERAW KPV+D
Sbjct: 98 LKGHKARADTYFGPGTVDTIKCHLNAVESKGEVDAVFVNAILSGIQIRNMERAWNKPVVD 157
Query: 179 RVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR 238
RVGLIIEIFNAHA TKEAKLQAELAAL YKKSRLVRV GP+GRLTFG +GEAEVVSARGR
Sbjct: 158 RVGLIIEIFNAHAFTKEAKLQAELAALSYKKSRLVRVLGPNGRLTFGGSGEAEVVSARGR 217
Query: 239 GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
GSGG+GF+SGAGETELQLQRRR+L+RR++LL+QIEEVRRTRAVQRA R+R GGS + LA
Sbjct: 218 GSGGQGFMSGAGETELQLQRRRLLDRRNYLLTQIEEVRRTRAVQRAGRKRQGGSSAQRLA 277
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
T+AVVGYTNAGKSTLVS L+DSDL+SD RLFAT+DPRL+S VLPSGRKVL SDTVGFISD
Sbjct: 278 TIAVVGYTNAGKSTLVSNLTDSDLYSDCRLFATVDPRLRSAVLPSGRKVLFSDTVGFISD 337
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP++LV+AFHATLEEVVEADLLVHV+D TAPNLEEHRTTV QVLQQ+GVS+EKL+NMIEV
Sbjct: 338 LPVKLVEAFHATLEEVVEADLLVHVVDSTAPNLEEHRTTVFQVLQQIGVSQEKLQNMIEV 397
Query: 419 WNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE 478
WNKID +EE DV+ E VD ++ D+ + DG E
Sbjct: 398 WNKID-AEEEFTDVD--------------------ENVDEHLNEDEEADETSSIDG--EE 434
Query: 479 DLG-ESMNKNHNDYSDGWLLSGDEQDNVEEE----FWNAAEDQQPEST-KDVCVMEKDSQ 532
D+ E++ + DYSDGWL E+D V E ++A DQQ ES+ KD V +++
Sbjct: 435 DVNIETLTEEKEDYSDGWLY---EEDTVLNEGDFCLPSSAADQQIESSNKDNSV--ENAG 489
Query: 533 SQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVERDFFNKKWRPPRTEDS 592
+ +P VK SA TGVGLQEL+E+IDE+L + D+K K VVER+ F++KWRP T+DS
Sbjct: 490 AMLPSSPHVKTSAITGVGLQELMELIDEKLSSQDEKLKGAQVVERNLFDRKWRPSHTQDS 549
>gi|449483318|ref|XP_004156554.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein At3g49725,
chloroplastic-like [Cucumis sativus]
Length = 631
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/557 (65%), Positives = 431/557 (77%), Gaps = 20/557 (3%)
Query: 24 ISLHSYSYSSSKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNE 83
I + S +S S + K+ D DDL +LFNRD PP+LF+VQPRL+P TFLQAKLNE
Sbjct: 45 ILILSSPFSHSSKHKKE--DSDDL----SLFNRDLTAPPKLFVVQPRLRPYTFLQAKLNE 98
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
ALCLANSLEEQRDGYF DFFDK++PP+VVVQNPS++ ARADT+FGPGTV+TIKCH+N
Sbjct: 99 ALCLANSLEEQRDGYFHIDFFDKDVPPYVVVQNPSVRG--ARADTYFGPGTVDTIKCHLN 156
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
AESK IFVNA LSG QQRNLE AW KPVLDRVGLIIEIFNAHA+TKEAKLQAELA
Sbjct: 157 AAESKVXSRCIFVNATLSGSQQRNLEWAWNKPVLDRVGLIIEIFNAHAYTKEAKLQAELA 216
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
ALMYKKSRLVRVRG DGR FG GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE
Sbjct: 217 ALMYKKSRLVRVRGLDGRYAFGARGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 276
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
RR+HL SQIEEVRRTR++QRA+R+RHGGS+G+ LATVAVVGYTNAGKSTLVSALSD+DL+
Sbjct: 277 RRNHLYSQIEEVRRTRSLQRASRKRHGGSNGQHLATVAVVGYTNAGKSTLVSALSDNDLY 336
Query: 324 SDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 383
SD+RLFAT+DPRL+SV LPSGRKV+LSDTVGFISDLP+QLV+AFHATLEEVVEADLLVHV
Sbjct: 337 SDSRLFATVDPRLRSVFLPSGRKVVLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHV 396
Query: 384 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNF 443
+DCTAPNL+EHR+TVLQVLQQ+GVS+ KL++M+EVWNKIDYH E E I DD +
Sbjct: 397 VDCTAPNLDEHRSTVLQVLQQIGVSKMKLQDMVEVWNKIDYHQEG----ESI--DDSCDD 450
Query: 444 SRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQD 503
E +++ E N G + + V + G+ K + G + G E D
Sbjct: 451 DNGEAANSSGED------SNEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNRMEGQESD 504
Query: 504 NVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLK 563
++ + EDQ P + K + E S DQ P V+ISAR GVGL ELL++ID +LK
Sbjct: 505 CCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLK 564
Query: 564 TLDDKQKSPNVVERDFF 580
D+K ++ NV+ER+
Sbjct: 565 VQDEKLQAQNVLERNVL 581
>gi|356499317|ref|XP_003518488.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like
[Glycine max]
Length = 594
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 416/544 (76%), Gaps = 24/544 (4%)
Query: 62 PRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKS 121
P+L +VQPR++P LQAKLNEALCLANSLE+QRDGYF TDFFDK LPPHV+VQN
Sbjct: 66 PKLLVVQPRVRPEKLLQAKLNEALCLANSLEDQRDGYFHTDFFDKPLPPHVLVQNRL--- 122
Query: 122 GKARADTFFGPGTVETIKCHINGA-ESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
RADT+FG GTV+ IK HI+ A ESKG++DA+FVNAILSGIQQRNLE AWGKPVLDRV
Sbjct: 123 --PRADTYFGRGTVDNIKVHIDAAAESKGDVDAVFVNAILSGIQQRNLEMAWGKPVLDRV 180
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLIIEIFNAHA TKEAKLQAELAAL YKK+RLVR+RGPDGR TFG +GEAEV RGS
Sbjct: 181 GLIIEIFNAHAFTKEAKLQAELAALSYKKTRLVRIRGPDGRNTFGASGEAEV----WRGS 236
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG+GF+SGAGETELQLQRRRILERR++LLSQIEEVRRTRA+QRA R+R GGS G GLATV
Sbjct: 237 GGQGFMSGAGETELQLQRRRILERRNYLLSQIEEVRRTRALQRAGRKRRGGSSGEGLATV 296
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AVVGYTNAGKSTLVS LSDSDL+SD RLFAT+DPR++S VLPSG+KVL SDTVGFISDLP
Sbjct: 297 AVVGYTNAGKSTLVSRLSDSDLYSDCRLFATVDPRVRSAVLPSGKKVLFSDTVGFISDLP 356
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
+QLV+AF ATLEEVVEADLLVHV+D +APNL+EHR+TV QVLQQ+GVSEEKL+NMIEVWN
Sbjct: 357 VQLVEAFQATLEEVVEADLLVHVVDSSAPNLDEHRSTVFQVLQQIGVSEEKLQNMIEVWN 416
Query: 421 KIDYHDEEMGDVEYIDGDDIS-----NFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGF 475
KID +E M EY+D +D N S + + D SE + D G N+G
Sbjct: 417 KIDMEEECMDVDEYLDDEDKDGDADENSSFSGEDDVKSEVLPEREKDRAGSISGAENEGI 476
Query: 476 VSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAA--EDQQPESTKDVCVMEKDSQS 533
D E M + DYSDGWL D D E+EF + + DQQ ES K + KD S
Sbjct: 477 KEVDC-EGMEEKE-DYSDGWLYDDDLVD--EDEFCSPSTVADQQNESYKKDNSVVKDG-S 531
Query: 534 QDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVERDFFNKKWRPPRTEDSS 593
Q P VK SA TGVGLQELLE+ID++L +K VVER +++KWRP ++S
Sbjct: 532 IGQSGPHVKTSAVTGVGLQELLELIDKKLSV--QNKKGARVVERSIYDRKWRPSHNQESG 589
Query: 594 VAVE 597
+AVE
Sbjct: 590 IAVE 593
>gi|147801371|emb|CAN74733.1| hypothetical protein VITISV_037839 [Vitis vinifera]
Length = 743
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 354/566 (62%), Positives = 414/566 (73%), Gaps = 54/566 (9%)
Query: 42 KDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDT 101
K K+D ++ +LFNRDP PP+LF+VQPRL+P T LQAKL+EA+ LANSLEEQRDGY+DT
Sbjct: 222 KKKEDPYNDASLFNRDPKSPPKLFVVQPRLRPDTLLQAKLDEAINLANSLEEQRDGYYDT 281
Query: 102 DFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILS 161
+ +K LPPHVVVQNP+++S K R+ + C + G L + N
Sbjct: 282 ELCEKGLPPHVVVQNPAVRSSKYRSVR-----KSYCLACIFLKRDDYGTLFFLHSNF--- 333
Query: 162 GIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGR 221
+RAWGKPVLDRVGLIIEIFNAHA TKEAKLQAELAALMYK++RLVRVRGPDGR
Sbjct: 334 -----KWQRAWGKPVLDRVGLIIEIFNAHAQTKEAKLQAELAALMYKRTRLVRVRGPDGR 388
Query: 222 LTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAV 281
TFG TGE EVVSARGRGSGGRGFISGAGETELQLQRRRILERR+HLLSQIE VRRTRA+
Sbjct: 389 YTFGATGETEVVSARGRGSGGRGFISGAGETELQLQRRRILERRNHLLSQIEAVRRTRAL 448
Query: 282 QRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL 341
QRA+R+R GGS+G+GLATVA+VGYTNAGKSTLVSALS+SDLFSD R
Sbjct: 449 QRASRKRRGGSNGQGLATVAIVGYTNAGKSTLVSALSESDLFSDDR-------------- 494
Query: 342 PSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQV 401
RKVLLSDTVGFISDLP+QLV+AFHATLEEVVEADLLVHVLD +A +L+E R+ VLQV
Sbjct: 495 ---RKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVLDSSASDLDEQRSVVLQV 551
Query: 402 LQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID-GDD--ISNFSRAEDKDTTSEPVDV 458
LQQ+GVSEEKL+NM+EVWNKID +EEMG +Y+D G+D + + S AED D SE +
Sbjct: 552 LQQIGVSEEKLQNMLEVWNKIDLQEEEMGADKYLDNGEDDVVDSLSGAEDDDMPSE-LPA 610
Query: 459 ECIDNYGGDDADNNDGFVSE----DLGESMNKNHNDYSDGWLL---SGDEQDNVEEEFWN 511
E + DD D ND VSE D+ E+M+ + DYSDGWL G E D W
Sbjct: 611 EPV-----DDDDEND-IVSELSSGDVQETMDDHEGDYSDGWLSRGGEGSEDDQGNPSRWK 664
Query: 512 AAEDQQPESTKDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKS 571
+DQQ ES KD + EKDS SQ Q P VK SA GVGLQELL +IDE+L+T QK
Sbjct: 665 TMDDQQSESFKDRRMTEKDSCSQPQCIPHVKTSAVMGVGLQELLALIDEKLET----QKV 720
Query: 572 PNVVERDFFNKKWRPPRTEDSSVAVE 597
P ER++F++KWRPP TED VAVE
Sbjct: 721 P---ERNYFDRKWRPPHTEDVGVAVE 743
>gi|238480011|ref|NP_001154669.1| GTP-binding protein, HflX [Arabidopsis thaliana]
gi|218551791|sp|Q0WTB4.2|Y3725_ARATH RecName: Full=GTP-binding protein At3g49725, chloroplastic; Flags:
Precursor
gi|332645061|gb|AEE78582.1| GTP-binding protein, HflX [Arabidopsis thaliana]
Length = 620
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 351/611 (57%), Positives = 423/611 (69%), Gaps = 60/611 (9%)
Query: 1 MLRAISVVKRTQLRSITQTLTFP-----ISLHSYSYSSSKRQTKDNKDKDD---LHDVVT 52
MLR +S+ R +LRS T + S S SSKR T + ++ D V
Sbjct: 39 MLRTVSLA-RNRLRSETPSSFLARDRLRSKTPSSSPFSSKRHTPKTSEIEEESTPKDSVL 97
Query: 53 LFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHV 112
L +DP P+LFLVQPRL PP +LQAKLNEALCLANSLEEQR GYF++DFFDKELP HV
Sbjct: 98 LNPKDPSSAPKLFLVQPRLAPPKYLQAKLNEALCLANSLEEQRYGYFESDFFDKELPSHV 157
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VVQNP +S K R DT+FG GTV+ IKCH+N +SK E+DA+FVNAIL+ IQQRNLER W
Sbjct: 158 VVQNPVRRSSKPRVDTYFGSGTVDNIKCHLNAEDSKEEVDAVFVNAILTAIQQRNLERIW 217
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
KPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMY KSRLVRVRG DGR TFG+ GEAEV
Sbjct: 218 AKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYNKSRLVRVRGTDGRHTFGQFGEAEV 277
Query: 233 VSARGRGSGG---RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
VSARGR GF+ GAGETELQLQRRRI +RR LLSQI+E +RTR +QRA R++
Sbjct: 278 VSARGRAGSKGTGGGFVGGAGETELQLQRRRISDRRIRLLSQIKEAQRTRLLQRAGRKKR 337
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLL 349
G +G T+AVVGYTNAGKSTL+SAL+ + L+ + RLFATLDP LKS LPSG VLL
Sbjct: 338 VGLEGESSGTIAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGNFVLL 397
Query: 350 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 409
SDTVGFISDLP+QLV AF +TLEEVVEADLL+HV+D TAPN+EEHR+TVL VL Q+GV E
Sbjct: 398 SDTVGFISDLPIQLVKAFQSTLEEVVEADLLLHVVDSTAPNIEEHRSTVLHVLNQIGVPE 457
Query: 410 EKLKNMIEVWNKIDYHDEEMGDVEYI--------DGDDISNFSRAEDKDTTSEPVDVECI 461
EKL+NMIEVWNKIDY ++E+ + +Y+ + +D ++ E D + VD + I
Sbjct: 458 EKLQNMIEVWNKIDYEEDEVEEEKYLDDGEGVGEEDEDEADLKAEETVDASEATVDEDQI 517
Query: 462 DNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPEST 521
N GDDA DGWLLS DE + + EFW PE
Sbjct: 518 QNGDGDDA-----------------------DGWLLSEDENAD-DPEFWKV-----PEVA 548
Query: 522 KDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVER-DFF 580
K + ++ PDV++SA TGVGL+ELL +ID+++K + K KSP +VER +
Sbjct: 549 K--------VDAANKKGPDVRVSALTGVGLKELLYLIDDKMK--EKKLKSPTIVERSELH 598
Query: 581 NKKWRPPRTED 591
+KWRPPR +D
Sbjct: 599 KRKWRPPRNDD 609
>gi|110743594|dbj|BAE99634.1| hypothetical protein [Arabidopsis thaliana]
Length = 620
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 350/611 (57%), Positives = 422/611 (69%), Gaps = 60/611 (9%)
Query: 1 MLRAISVVKRTQLRSITQTLTFP-----ISLHSYSYSSSKRQTKDNKDKDD---LHDVVT 52
MLR +S+ R +LRS T + S S SSKR T + ++ D V
Sbjct: 39 MLRTVSLA-RNRLRSETPSSFLARDRLRSKTPSSSPFSSKRHTPKTSEIEEESTPKDSVL 97
Query: 53 LFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHV 112
L +DP P+LFLVQPRL PP +LQAKLNEALCLANSLEEQR GYF++DFFDKELP HV
Sbjct: 98 LNPKDPSSAPKLFLVQPRLAPPKYLQAKLNEALCLANSLEEQRYGYFESDFFDKELPSHV 157
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VVQNP +S K R DT+FG GTV+ IKCH+N +SK E+DA+FVNAIL+ IQQRNLER W
Sbjct: 158 VVQNPVRRSSKPRVDTYFGSGTVDNIKCHLNAEDSKEEVDAVFVNAILTAIQQRNLERIW 217
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
KPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMY KSRLVRVRG DGR TFG+ GEAEV
Sbjct: 218 AKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYNKSRLVRVRGTDGRHTFGQFGEAEV 277
Query: 233 VSARGRGSGG---RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
VSARGR GF+ GAGETELQLQRRRI +RR LLSQI+E +RTR +QRA R++
Sbjct: 278 VSARGRAGSKGTGGGFVGGAGETELQLQRRRISDRRIRLLSQIKEAQRTRLLQRAGRKKR 337
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLL 349
G +G T+AVVGYTNAGKSTL+SAL+ + L+ + RLFATLDP LKS LPSG VLL
Sbjct: 338 VGLEGESSGTIAVVGYTNAGKSTLISALTKAALYCNERLFATLDPTLKSAHLPSGNFVLL 397
Query: 350 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 409
SDTVGFISDLP+QLV AF +TLEEVVEADLL+HV+D TAPN+EEHR+TVL VL Q+GV E
Sbjct: 398 SDTVGFISDLPIQLVKAFQSTLEEVVEADLLLHVVDSTAPNIEEHRSTVLHVLNQIGVPE 457
Query: 410 EKLKNMIEVWNKIDYHDEEMGDVEYI--------DGDDISNFSRAEDKDTTSEPVDVECI 461
EKL+NMIEVWNKIDY ++E+ + +Y+ + +D ++ E D + VD + I
Sbjct: 458 EKLQNMIEVWNKIDYEEDEVEEEKYLDDGEGVGEEDEDEADLKAEETVDASEATVDEDQI 517
Query: 462 DNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPEST 521
N GDDA DGWLLS DE + + FW PE
Sbjct: 518 QNGDGDDA-----------------------DGWLLSEDENAD-DPGFWKV-----PEVA 548
Query: 522 KDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVER-DFF 580
K + ++ PDV++SA TGVGL+ELL +ID+++K + K KSP +VER +
Sbjct: 549 K--------VDAANKKGPDVRVSALTGVGLKELLYLIDDKMK--EKKLKSPTIVERSELH 598
Query: 581 NKKWRPPRTED 591
+KWRPPR +D
Sbjct: 599 KRKWRPPRNDD 609
>gi|414872584|tpg|DAA51141.1| TPA: hypothetical protein ZEAMMB73_713960 [Zea mays]
gi|414872585|tpg|DAA51142.1| TPA: hypothetical protein ZEAMMB73_713960 [Zea mays]
Length = 588
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 333/562 (59%), Positives = 411/562 (73%), Gaps = 28/562 (4%)
Query: 32 SSSKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSL 91
SS D D+ L + L +RDP+ PPRL +VQPRL+P + L++KL EAL LANSL
Sbjct: 37 SSPTLSPADCDDEGPLRGLFVL-SRDPECPPRLLVVQPRLRPGSLLESKLAEALNLANSL 95
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EE+RDG++ ++F K PPH+VVQNP+ + G++ ADT+FGPGTV+ +KC+++ ES+ ++
Sbjct: 96 EERRDGFYHSEFGAKGAPPHLVVQNPASR-GRSHADTYFGPGTVDNVKCYLSATESEEDV 154
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
DA+FVNAILSGIQQRNLE AWGK VLDRVGLIIEIFNAHA TKEAKLQ+ELAALMY K+R
Sbjct: 155 DAVFVNAILSGIQQRNLEVAWGKSVLDRVGLIIEIFNAHAETKEAKLQSELAALMYMKTR 214
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETE--LQLQRRRILERRSHLL 269
LVRVRGP GRLTFG +GEAEVVSARGRGSGGRGF+SGAGETE LQRRRI ERR LL
Sbjct: 215 LVRVRGPGGRLTFGPSGEAEVVSARGRGSGGRGFMSGAGETELQ--LQRRRIQERRVSLL 272
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
+QIE+VRRTRA+QR++R+RHGGS G+ L TVAVVGYTNAGKSTLVSALS++DL+SD RLF
Sbjct: 273 AQIEDVRRTRAIQRSSRKRHGGSFGQELVTVAVVGYTNAGKSTLVSALSEADLYSDDRLF 332
Query: 330 ATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 389
AT+DPRL+SV+LPSGRK LLSDTVGFISDLP+QLV+AFHATLEEVVEAD+LVHVLD +A
Sbjct: 333 ATVDPRLRSVILPSGRKALLSDTVGFISDLPVQLVEAFHATLEEVVEADMLVHVLDSSAS 392
Query: 390 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDG-DDISNFSRAED 448
NLEEHR+TVLQVLQQ+GVS+EK+ NMIEVWNKID DE + DG DD + E
Sbjct: 393 NLEEHRSTVLQVLQQIGVSQEKINNMIEVWNKIDLVDENVKS----DGIDDEVFLTEGEQ 448
Query: 449 KDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEE 508
+D D + D D +DG SE L E +++ N+ L + E
Sbjct: 449 EDDIFSEDDAPS-EQTSFDSVDVDDGADSEYLSEENSEDSNE------LPSKKSFAEPTE 501
Query: 509 FWNAAEDQQPESTKDVCVMEKDSQSQDQHAPD--VKISARTGVGLQELLEIIDERLKTLD 566
E E ++ V++ + + Q A VK SA TG GLQELL +I+ +L
Sbjct: 502 MGAMKELSSKECFGELRVLDTNGHTFPQPASTCHVKTSAVTGTGLQELLALIERKLT--- 558
Query: 567 DKQKSPNVVERDF--FNKKWRP 586
+ VV+R + F++KWRP
Sbjct: 559 ---EQQTVVQRSYGPFDRKWRP 577
>gi|226493944|ref|NP_001145694.1| uncharacterized protein LOC100279198 [Zea mays]
gi|219884045|gb|ACL52397.1| unknown [Zea mays]
Length = 588
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 332/553 (60%), Positives = 409/553 (73%), Gaps = 29/553 (5%)
Query: 43 DKDDLHDVVTLF--NRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFD 100
D DD + LF +RDP+ PPRL +VQPRL+P + L++KL EAL LANSLEE+RDG++
Sbjct: 45 DCDDEGPLRGLFVLSRDPECPPRLLVVQPRLRPGSLLESKLAEALNLANSLEERRDGFYH 104
Query: 101 TDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAIL 160
++F K PPH+VVQNP+ + G++ ADT+FGPGTV+ +KC+++ ES+ ++DA+FVNAIL
Sbjct: 105 SEFGAKGAPPHLVVQNPASR-GRSHADTYFGPGTVDNVKCYLSATESEEDVDAVFVNAIL 163
Query: 161 SGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDG 220
SGIQQRNLE AWGK VLDRVGLIIEIFNAHA TKEAKLQ+ELAALMY K+RLVRVRGP G
Sbjct: 164 SGIQQRNLEVAWGKSVLDRVGLIIEIFNAHAETKEAKLQSELAALMYMKTRLVRVRGPGG 223
Query: 221 RLTFGETGEAEVVSARGRGSGGRGFISGAGETE--LQLQRRRILERRSHLLSQIEEVRRT 278
RLTFG +GEAEVVSARGRGSGGRGF+SGAGETE LQRRRI ERR LL+QIE+VRRT
Sbjct: 224 RLTFGPSGEAEVVSARGRGSGGRGFMSGAGETELQ--LQRRRIQERRVSLLAQIEDVRRT 281
Query: 279 RAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKS 338
RA+QR++R+RHGGS G+ L TVAVVGYTNAGKSTLVSALS++DL+SD RLFAT+DPRL+S
Sbjct: 282 RAIQRSSRKRHGGSFGQELVTVAVVGYTNAGKSTLVSALSEADLYSDDRLFATVDPRLRS 341
Query: 339 VVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTV 398
V+LPSGRK LLSDTVGFISDLP+QLV+AFHATLEEVVEAD+LVHVLD +A NLEEHR+TV
Sbjct: 342 VILPSGRKALLSDTVGFISDLPVQLVEAFHATLEEVVEADMLVHVLDSSASNLEEHRSTV 401
Query: 399 LQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDG-DDISNFSRAEDKDTTSEPVD 457
LQVLQQ+GVS+EK+ NMIEVWNKID DE + DG DD + E +D D
Sbjct: 402 LQVLQQIGVSQEKINNMIEVWNKIDLVDENVKS----DGIDDEVFLTEGEQEDDIFSEDD 457
Query: 458 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQ 517
+ D D +DG SE L E +++ N+ L + E E
Sbjct: 458 APS-EQTSFDSVDVDDGADSEYLSEENSEDSNE------LPSKKSFAEPTEMGAMKELSS 510
Query: 518 PESTKDVCVMEKDSQSQDQHAPD--VKISARTGVGLQELLEIIDERLKTLDDKQKSPNVV 575
E ++ V++ + + Q A VK SA TG GLQELL +I+ +L + VV
Sbjct: 511 KECFGELRVLDTNGHTLPQPASTCHVKTSAVTGTGLQELLALIERKLT------EQQTVV 564
Query: 576 ERDF--FNKKWRP 586
+R + F++KWRP
Sbjct: 565 QRSYGPFDRKWRP 577
>gi|115455087|ref|NP_001051144.1| Os03g0727900 [Oryza sativa Japonica Group]
gi|113549615|dbj|BAF13058.1| Os03g0727900 [Oryza sativa Japonica Group]
Length = 568
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 321/540 (59%), Positives = 389/540 (72%), Gaps = 42/540 (7%)
Query: 64 LFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGK 123
L +VQPRL+P + L +KL EAL LANSLEE RDG++ K PPH+V QNPS + G+
Sbjct: 42 LLVVQPRLRPGSLLDSKLAEALNLANSLEEPRDGFYKEGLAAKGAPPHLVAQNPSSR-GR 100
Query: 124 ARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
+ D FFGPGTV+ +KC++ +ES+ +DA+FVNAIL+GIQQRNLE AWGKPVLDRVGLI
Sbjct: 101 SHVDKFFGPGTVDNVKCYLRTSESEEGVDAVFVNAILTGIQQRNLEVAWGKPVLDRVGLI 160
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
IEIFNAHA TKEAKLQ+ELAALMY K+RLVRVRGP GRLTFG +GEAEVVSARGRGSGGR
Sbjct: 161 IEIFNAHAETKEAKLQSELAALMYMKTRLVRVRGPGGRLTFGSSGEAEVVSARGRGSGGR 220
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
GFISGAGETELQLQRRRI E R LL+QIE+VRRTRA+QR+ R+RHG S G+ L TVAVV
Sbjct: 221 GFISGAGETELQLQRRRIQECRVRLLAQIEDVRRTRAIQRSNRKRHGNSFGQELVTVAVV 280
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQL 363
GYTNAGKSTLVSALS++DL+SD RLFAT+DPRL+SV+LPSGRK LLSDTVGFISDLP+QL
Sbjct: 281 GYTNAGKSTLVSALSETDLYSDDRLFATVDPRLRSVILPSGRKALLSDTVGFISDLPVQL 340
Query: 364 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
V+AFHATLEEVVEAD+LVHVLD +APN+EEHR+TVLQVLQQ+GVS++K+ +MIEVWNKID
Sbjct: 341 VEAFHATLEEVVEADMLVHVLDSSAPNIEEHRSTVLQVLQQIGVSQDKINSMIEVWNKID 400
Query: 424 YHDEEMGDVEYIDGDDI--------SNFSRAEDKDTTSEPVDVECIDN------YGGDDA 469
D DV D+I + D +E E +D+ ++
Sbjct: 401 IVDNNDNDVTDDIEDEIFLTEGEEDKEEELFSENDVPAEESSFESLDDGTDSEYLSEENL 460
Query: 470 DNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPES-TKDVCVME 528
+ N+G +S L S + N +S +D E PE+ + D C
Sbjct: 461 EGNNGEISSSLEPSEMRAMNS------VSSSSKDCF-------GELCGPETISTDSC--- 504
Query: 529 KDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVERDF--FNKKWRP 586
S +Q VK SA TG GLQELLE+ID K L ++Q +VER + F++KWRP
Sbjct: 505 --SSTQPMSTCHVKTSAVTGTGLQELLELID---KKLTERQ---TIVERSYGPFDRKWRP 556
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 327/593 (55%), Positives = 397/593 (66%), Gaps = 70/593 (11%)
Query: 6 SVVKRTQLRSITQTLTFPISLHSYSYSSSKR---QTKDNKDKDDLHDVVTLFNRDPDDPP 62
S + R +LRS T S S SSKR +T + +++ D V L +DP P
Sbjct: 644 SFLARDRLRSKTP---------SSSPFSSKRHTPKTSEIEEESTPKDSVLLNPKDPSSAP 694
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
+LFLVQPRL PP +LQAKLNEALCLANSLEEQR GYF++DFFDKELP HVVVQNP +S
Sbjct: 695 KLFLVQPRLAPPKYLQAKLNEALCLANSLEEQRYGYFESDFFDKELPSHVVVQNPVRRSS 754
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K R E+DA+FVNAIL+ IQQRNLER W KPVLDRVGL
Sbjct: 755 KPRE-----------------------EVDAVFVNAILTAIQQRNLERIWAKPVLDRVGL 791
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
IIEIFNAHAHTKEAKLQAELAALMY KSRLVRVRG DGR TFG+ GEAEVVSARGR
Sbjct: 792 IIEIFNAHAHTKEAKLQAELAALMYNKSRLVRVRGTDGRHTFGQFGEAEVVSARGRAGSK 851
Query: 243 RGFISGAG---ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
G ETELQLQRRRI +RR LLSQI+E +RTR +QRA R++ G +G T
Sbjct: 852 GTGGGFVGGAGETELQLQRRRISDRRIRLLSQIKEAQRTRLLQRAGRKKRVGLEGESSGT 911
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
+AVVGYTNAGKSTL+SAL+ + L+ + RLFATLDP LKS LPSG VLLSDTVGFISDL
Sbjct: 912 IAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGNFVLLSDTVGFISDL 971
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P+QLV AF +TLEEVVEADLL+HV+D TAPN+EEHR+TVL VL Q+GV EEKL+NMIEVW
Sbjct: 972 PIQLVKAFQSTLEEVVEADLLLHVVDSTAPNIEEHRSTVLHVLNQIGVPEEKLQNMIEVW 1031
Query: 420 NKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSED 479
NKIDY ++E+ + +Y+D + ++ D +E + D ++ V ED
Sbjct: 1032 NKIDYEEDEVEEEKYLDDGEGVGEEDEDEADLKAE------------ETVDASEATVDED 1079
Query: 480 LGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAP 539
+ D +DGWLLS DE + + EFW PE K + ++ P
Sbjct: 1080 ---QIQNGDGDDADGWLLSEDENAD-DPEFWKV-----PEVAK--------VDAANKKGP 1122
Query: 540 DVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVER-DFFNKKWRPPRTED 591
DV++SA TGVGL+ELL +ID+++K + K KSP +VER + +KWRPPR +D
Sbjct: 1123 DVRVSALTGVGLKELLYLIDDKMK--EKKLKSPTIVERSELHKRKWRPPRNDD 1173
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 331/595 (55%), Positives = 398/595 (66%), Gaps = 75/595 (12%)
Query: 6 SVVKRTQLRSITQTLTFPISLHSYSYSSSKR---QTKDNKDKDDLHDVVTLFNRDPDDPP 62
S + R LRS T S S SSKR +T + +++ D V L +DP PP
Sbjct: 648 SFLARNHLRSKTP---------SSSPFSSKRHAPKTSEVEEESTPKDSVLLNPKDPSSPP 698
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
+LFLVQPRL PP LQAKLNEALCLANSLEEQR GYF++DFFDKELP HVVVQNP +S
Sbjct: 699 KLFLVQPRLAPPKLLQAKLNEALCLANSLEEQRYGYFESDFFDKELPSHVVVQNPVRRSS 758
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K R E+DA+FVNAIL+ IQQRNLER W KPVLDRVGL
Sbjct: 759 KPRE-----------------------EVDAVFVNAILTAIQQRNLERIWAKPVLDRVGL 795
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
IIEIFNAHAHTKEAKLQAELAALMY KSRLVRVRG DGR TFG+ GEAEVVSARGR
Sbjct: 796 IIEIFNAHAHTKEAKLQAELAALMYNKSRLVRVRGTDGRHTFGQFGEAEVVSARGRAGSK 855
Query: 243 RGFISGAG---ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
G ETELQLQRRRI +RR LLSQI+E +RTR +QRA R + G +G T
Sbjct: 856 GTGGGFVGGAGETELQLQRRRISDRRLRLLSQIKEAQRTRLLQRAGRNKRVGLEGESSGT 915
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
+AVVGYTNAGKSTL+SAL+ + L+ + RLFATLDP LKS LPSG+ VLLSDTVGFISDL
Sbjct: 916 IAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGKFVLLSDTVGFISDL 975
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P+QLV AF +TLEEVVEAD+L+HV+D TAPN+EEHR+TV +L+Q+GVSEEKL+NMIEVW
Sbjct: 976 PIQLVKAFQSTLEEVVEADILLHVVDSTAPNIEEHRSTVFHILKQIGVSEEKLQNMIEVW 1035
Query: 420 NKIDY-HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE 478
NKIDY +EE+GD +Y+D E+ D +E + D + V+E
Sbjct: 1036 NKIDYEEEEEVGDAKYLD----DGEGEEEEADLKAE------------ETVDASIAAVNE 1079
Query: 479 DLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHA 538
D +N ++ SDGWLLS DE + + E W PE K + +
Sbjct: 1080 D----QIQNQDNDSDGWLLSEDENAD-DSELWKV-----PEVAK--------VDAAQKKG 1121
Query: 539 PDVKISARTGVGLQELLEIIDERLKTLDDKQ-KSPNVVER-DFFNKKWRPPRTED 591
PDV++SA TGVGL+ELL +ID+++K ++K+ KS VVER D +KWRPPR +D
Sbjct: 1122 PDVRVSALTGVGLKELLYLIDDKMKVEEEKKLKSQTVVERSDLHKRKWRPPRNDD 1176
>gi|357117130|ref|XP_003560327.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like
[Brachypodium distachyon]
Length = 591
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 324/546 (59%), Positives = 405/546 (74%), Gaps = 32/546 (5%)
Query: 53 LFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTD-FFDKELPPH 111
+ +RDP+ PPRL +VQPRL+P T L +KL EAL LA+SL+E RDG+ D K+ PPH
Sbjct: 55 VLSRDPEHPPRLLVVQPRLRPSTLLDSKLAEALNLASSLQEARDGFDRADESAAKDGPPH 114
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
+VVQNP+ + G+ ADT+FGPGTV+ IKC++ +++ ELDA+FVN +LSGIQQRNLE A
Sbjct: 115 LVVQNPASR-GRNHADTYFGPGTVDNIKCYLRALDAEEELDAVFVNTLLSGIQQRNLEVA 173
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
W KPVLDRVGLIIEIFNAHA TKEAKLQ+ELAALMY K+RLVRVRGP GRLTFG +GEAE
Sbjct: 174 WVKPVLDRVGLIIEIFNAHAETKEAKLQSELAALMYMKTRLVRVRGPGGRLTFGTSGEAE 233
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
VVSARGRGSGGRGF+SGAGETELQLQRRRI +RR LL+QIE+VRRTRA+QR++R+RHGG
Sbjct: 234 VVSARGRGSGGRGFMSGAGETELQLQRRRIQDRRISLLTQIEDVRRTRAIQRSSRKRHGG 293
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
S G+ L T+AVVGYTNAGKSTLVSALS++DL+SD RLFAT+DPRL+SV+LPSGRK LLSD
Sbjct: 294 SFGQELVTIAVVGYTNAGKSTLVSALSEADLYSDDRLFATVDPRLRSVILPSGRKALLSD 353
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFISDLP+QLV+AFHATLEEV EAD+LVHVLD +APNL+EHR+TVLQVLQQ+GVSE+K
Sbjct: 354 TVGFISDLPVQLVEAFHATLEEVAEADMLVHVLDSSAPNLDEHRSTVLQVLQQIGVSEDK 413
Query: 412 LKNMIEVWNKIDYHDEEMGDVEYIDG--DDISNFSRAEDKDTTSE---PVDVECIDNYGG 466
+ NMIEVWNKID D DG D+I E++D SE P + D+
Sbjct: 414 INNMIEVWNKIDLVDNNA----LTDGIEDEIFLTEGEEEEDLFSEDDVPSEQSSFDSL-- 467
Query: 467 DDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPESTKDV-- 524
DD +++ E+ +K +D S + + + E ++P K V
Sbjct: 468 DDTVDSESLSEENSENGDDKMASDKSFDEPI---DMKAMNSELLTTECFREPNGPKAVTT 524
Query: 525 --CVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVERDF--F 580
C + +Q VK SA TG GLQELL++ID + L+++Q++ VV+R + F
Sbjct: 525 SGCTL-----TQSVSTCHVKTSAVTGTGLQELLQLIDTK---LNEQQQT--VVQRSYGPF 574
Query: 581 NKKWRP 586
++KWRP
Sbjct: 575 DRKWRP 580
>gi|224097214|ref|XP_002310879.1| predicted protein [Populus trichocarpa]
gi|222853782|gb|EEE91329.1| predicted protein [Populus trichocarpa]
Length = 466
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 305/449 (67%), Positives = 347/449 (77%), Gaps = 22/449 (4%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
++DA+FVNAILSGIQ RNLE DRV LIIEIFNAHAHTKEAKLQAELAALMY K
Sbjct: 33 DVDAVFVNAILSGIQLRNLEA-------DRVSLIIEIFNAHAHTKEAKLQAELAALMYAK 85
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
SRLVRVR DGRLTFG G+AEVVSARGRGSGGRGF SGAGETELQLQRRRILERR L
Sbjct: 86 SRLVRVRSSDGRLTFGAFGDAEVVSARGRGSGGRGFTSGAGETELQLQRRRILERRETLR 145
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
+QI++VRRTRA+QRA+R+RH D + LATVAVVGYTNAGKSTLVSALS +DL+SD+RLF
Sbjct: 146 TQIKDVRRTRALQRASRKRHCQLDSQYLATVAVVGYTNAGKSTLVSALSGNDLYSDSRLF 205
Query: 330 ATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 389
ATLD RLKSVVLPSGRKVLL DTVGFISDLP+QLV AF ATLEEVVEADLLVH++D TAP
Sbjct: 206 ATLDARLKSVVLPSGRKVLLGDTVGFISDLPVQLVQAFRATLEEVVEADLLVHLMDSTAP 265
Query: 390 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDD--ISNFSRAE 447
NLEEHR TVLQ LQQ+GVSEEKL+NMIEVWNKIDY +E + D DG+D S+ S E
Sbjct: 266 NLEEHRATVLQALQQIGVSEEKLQNMIEVWNKIDYQEEMVADEYLCDGEDGEASSLSGDE 325
Query: 448 DKDTTSEPVDVECIDNYGGDDADNNDGFVSE-DLGESMNKNHNDYSDGWLLSGDEQDNVE 506
D S G DD N SE D E+++ +DYS WLLSGD+Q+ V
Sbjct: 326 GGDVAS-----------GADDEINGFSGRSEGDFEETIDNEQDDYSGDWLLSGDDQEMVG 374
Query: 507 EEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLD 566
+ + ++Q+ E+ D+ ME Q Q QH P +KISA TGVGLQELLE+ID+RLKT D
Sbjct: 375 DHWLKTLDEQRDEALNDLG-MENFLQCQAQHGPHLKISAMTGVGLQELLELIDDRLKTQD 433
Query: 567 DKQKSPNVVERDFFNKKWRPPRTEDSSVA 595
+K K NVVER FFNKKWRPPRTED+ +A
Sbjct: 434 EKFKEQNVVERGFFNKKWRPPRTEDAGIA 462
>gi|414872583|tpg|DAA51140.1| TPA: hypothetical protein ZEAMMB73_713960 [Zea mays]
Length = 558
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 308/560 (55%), Positives = 386/560 (68%), Gaps = 54/560 (9%)
Query: 32 SSSKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSL 91
SS D D+ L + L +RDP+ PPRL +VQPRL+P + L++KL EAL LANSL
Sbjct: 37 SSPTLSPADCDDEGPLRGLFVL-SRDPECPPRLLVVQPRLRPGSLLESKLAEALNLANSL 95
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EE+RDG++ ++F K PPH+VVQNP+ + G++ ADT+FGPGTV+ +KC+++ ES+ ++
Sbjct: 96 EERRDGFYHSEFGAKGAPPHLVVQNPASR-GRSHADTYFGPGTVDNVKCYLSATESEEDV 154
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
DA+FVNAILSGIQQRNLE +ELAALMY K+R
Sbjct: 155 DAVFVNAILSGIQQRNLE------------------------------SELAALMYMKTR 184
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
LVRVRGP GRLTFG +GEAEVVSARGRGSGGRGF+SGAGETELQLQRRRI ERR LL+Q
Sbjct: 185 LVRVRGPGGRLTFGPSGEAEVVSARGRGSGGRGFMSGAGETELQLQRRRIQERRVSLLAQ 244
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
IE+VRRTRA+QR++R+RHGGS G+ L TVAVVGYTNAGKSTLVSALS++DL+SD RLFAT
Sbjct: 245 IEDVRRTRAIQRSSRKRHGGSFGQELVTVAVVGYTNAGKSTLVSALSEADLYSDDRLFAT 304
Query: 332 LDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 391
+DPRL+SV+LPSGRK LLSDTVGFISDLP+QLV+AFHATLEEVVEAD+LVHVLD +A NL
Sbjct: 305 VDPRLRSVILPSGRKALLSDTVGFISDLPVQLVEAFHATLEEVVEADMLVHVLDSSASNL 364
Query: 392 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDG-DDISNFSRAEDKD 450
EEHR+TVLQVLQQ+GVS+EK+ NMIEVWNKID DE + DG DD + E +D
Sbjct: 365 EEHRSTVLQVLQQIGVSQEKINNMIEVWNKIDLVDENVKS----DGIDDEVFLTEGEQED 420
Query: 451 TTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFW 510
D + D D +DG SE L E +++ N+ L + E
Sbjct: 421 DIFSEDDAPS-EQTSFDSVDVDDGADSEYLSEENSEDSNE------LPSKKSFAEPTEMG 473
Query: 511 NAAEDQQPESTKDVCVMEKDSQSQDQHAPD--VKISARTGVGLQELLEIIDERLKTLDDK 568
E E ++ V++ + + Q A VK SA TG GLQELL +I+ +L
Sbjct: 474 AMKELSSKECFGELRVLDTNGHTFPQPASTCHVKTSAVTGTGLQELLALIERKLT----- 528
Query: 569 QKSPNVVERDF--FNKKWRP 586
+ VV+R + F++KWRP
Sbjct: 529 -EQQTVVQRSYGPFDRKWRP 547
>gi|50428705|gb|AAT77056.1| putative GTP-binding protein [Oryza sativa Japonica Group]
Length = 408
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/364 (69%), Positives = 295/364 (81%), Gaps = 6/364 (1%)
Query: 23 PISLHSYSYSSSKRQTKDNKDKDDLHD-----VVTLFNRDPDDPPRLFLVQPRLKPPTFL 77
P L S S KR + D D ++L RDP+ PPRL +VQPRL+P + L
Sbjct: 30 PAPLRSLSTRWGKRSSPTASPPADSDDEGSPRGLSLLPRDPERPPRLLVVQPRLRPGSLL 89
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+KL EAL LANSLEE RDG++ K PPH+V QNPS + G++ D FFGPGTV+
Sbjct: 90 DSKLAEALNLANSLEEPRDGFYKEGLAAKGAPPHLVAQNPSSR-GRSHVDKFFGPGTVDN 148
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+KC++ +ES+ +DA+FVNAIL+GIQQRNLE AWGKPVLDRVGLIIEIFNAHA TKEAK
Sbjct: 149 VKCYLRTSESEEGVDAVFVNAILTGIQQRNLEVAWGKPVLDRVGLIIEIFNAHAETKEAK 208
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ+ELAALMY K+RLVRVRGP GRLTFG +GEAEVVSARGRGSGGRGFISGAGETELQLQ
Sbjct: 209 LQSELAALMYMKTRLVRVRGPGGRLTFGSSGEAEVVSARGRGSGGRGFISGAGETELQLQ 268
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RRRI E R LL+QIE+VRRTRA+QR+ R+RHG S G+ L TVAVVGYTNAGKSTLVSAL
Sbjct: 269 RRRIQECRVRLLAQIEDVRRTRAIQRSNRKRHGNSFGQELVTVAVVGYTNAGKSTLVSAL 328
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
S++DL+SD RLFAT+DPRL+SV+LPSGRK LLSDTVGFISDLP+QLV+AFHATLEEVVEA
Sbjct: 329 SETDLYSDDRLFATVDPRLRSVILPSGRKALLSDTVGFISDLPVQLVEAFHATLEEVVEA 388
Query: 378 DLLV 381
D+LV
Sbjct: 389 DMLV 392
>gi|108710872|gb|ABF98667.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 397
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/374 (63%), Positives = 276/374 (73%), Gaps = 37/374 (9%)
Query: 23 PISLHSYSYSSSKRQTKDNKDKDDLHD-----VVTLFNRDPDDPPRLFLVQPRLKPPTFL 77
P L S S KR + D D ++L RDP+ PPRL +VQPRL+P + L
Sbjct: 30 PAPLRSLSTRWGKRSSPTASPPADSDDEGSPRGLSLLPRDPERPPRLLVVQPRLRPGSLL 89
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+KL EAL LANSLEE RDG++ K PPH+V QNPS + G++ D FFGPGTV+
Sbjct: 90 DSKLAEALNLANSLEEPRDGFYKEGLAAKGAPPHLVAQNPSSR-GRSHVDKFFGPGTVDN 148
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+KC++ +ES E AWGKPVLDRVGLIIEIFNAHA TKEAK
Sbjct: 149 VKCYLRTSES---------------------EVAWGKPVLDRVGLIIEIFNAHAETKEAK 187
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ+ELAALMY K+RLVRVRGP GRLTFG +GEAEVVSARGRGSGGRGFISGAGETELQLQ
Sbjct: 188 LQSELAALMYMKTRLVRVRGPGGRLTFGSSGEAEVVSARGRGSGGRGFISGAGETELQLQ 247
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RRRI E R LL+QIE+VRRTRA+QR+ R+RHG S G+ L TVAVVGYTNAGKSTLVSAL
Sbjct: 248 RRRIQECRVRLLAQIEDVRRTRAIQRSNRKRHGNSFGQELVTVAVVGYTNAGKSTLVSAL 307
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSG----------RKVLLSDTVGFISDLPLQLVDAF 367
S++DL+SD RLFAT+DPRL+SV+LPSG RK LLSDTVGFISDLP+QLV+AF
Sbjct: 308 SETDLYSDDRLFATVDPRLRSVILPSGYLNRFFIHLLRKALLSDTVGFISDLPVQLVEAF 367
Query: 368 HATLEEVVEADLLV 381
HATLEEVVEAD+LV
Sbjct: 368 HATLEEVVEADMLV 381
>gi|414872582|tpg|DAA51139.1| TPA: hypothetical protein ZEAMMB73_713960 [Zea mays]
Length = 369
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/350 (64%), Positives = 276/350 (78%), Gaps = 32/350 (9%)
Query: 32 SSSKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSL 91
SS D D+ L + L +RDP+ PPRL +VQPRL+P + L++KL EAL LANSL
Sbjct: 37 SSPTLSPADCDDEGPLRGLFVL-SRDPECPPRLLVVQPRLRPGSLLESKLAEALNLANSL 95
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EE+RDG++ ++F K PPH+VVQNP+ + G++ ADT+FGPGTV+ +KC+++ ES+ ++
Sbjct: 96 EERRDGFYHSEFGAKGAPPHLVVQNPASR-GRSHADTYFGPGTVDNVKCYLSATESEEDV 154
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
DA+FVNAILSGIQQRNLE +ELAALMY K+R
Sbjct: 155 DAVFVNAILSGIQQRNLE------------------------------SELAALMYMKTR 184
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
LVRVRGP GRLTFG +GEAEVVSARGRGSGGRGF+SGAGETELQLQRRRI ERR LL+Q
Sbjct: 185 LVRVRGPGGRLTFGPSGEAEVVSARGRGSGGRGFMSGAGETELQLQRRRIQERRVSLLAQ 244
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
IE+VRRTRA+QR++R+RHGGS G+ L TVAVVGYTNAGKSTLVSALS++DL+SD RLFAT
Sbjct: 245 IEDVRRTRAIQRSSRKRHGGSFGQELVTVAVVGYTNAGKSTLVSALSEADLYSDDRLFAT 304
Query: 332 LDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLV 381
+DPRL+SV+LPSGRK LLSDTVGFISDLP+QLV+AFHATLEEVVEAD+LV
Sbjct: 305 VDPRLRSVILPSGRKALLSDTVGFISDLPVQLVEAFHATLEEVVEADMLV 354
>gi|125587011|gb|EAZ27675.1| hypothetical protein OsJ_11621 [Oryza sativa Japonica Group]
Length = 367
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/356 (62%), Positives = 257/356 (72%), Gaps = 37/356 (10%)
Query: 23 PISLHSYSYSSSKRQTKDNKDKDDLHD-----VVTLFNRDPDDPPRLFLVQPRLKPPTFL 77
P L S S KR + D D ++L RDP+ PPRL +VQP L+P + L
Sbjct: 30 PAPLRSLSTRWGKRSSPTASPPADSDDEGSPRGLSLLPRDPERPPRLLVVQPSLRPGSLL 89
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+KL EAL LANSLEE RDG++ K PPH+V QNPS + G++ D FFGPGTV+
Sbjct: 90 DSKLAEALNLANSLEEPRDGFYKEGLAAKGAPPHLVAQNPSSR-GRSHVDKFFGPGTVDN 148
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+KC++ +ES E AWGKPVLDRVGLIIEIFNAHA TKEAK
Sbjct: 149 VKCYLRTSES---------------------EVAWGKPVLDRVGLIIEIFNAHAETKEAK 187
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ+ELAALMY K+RLVRVRGP GRLTFG +GEAEVVSARGRGSGGRGFISGAGETELQLQ
Sbjct: 188 LQSELAALMYMKTRLVRVRGPGGRLTFGSSGEAEVVSARGRGSGGRGFISGAGETELQLQ 247
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RRRI E R LL+QIE+VRRTRA+QR+ R+RHG S G+ L TVAVVGYTNAGKSTLVSAL
Sbjct: 248 RRRIQECRVRLLAQIEDVRRTRAIQRSNRKRHGNSFGQELVTVAVVGYTNAGKSTLVSAL 307
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSG----------RKVLLSDTVGFISDLPLQL 363
S++DL+SD RLFAT+DPRL+SV+LPSG RK LLSDTVGFISDLP+Q+
Sbjct: 308 SETDLYSDDRLFATVDPRLRSVILPSGYLNRFFIHLLRKALLSDTVGFISDLPVQV 363
>gi|218193248|gb|EEC75675.1| hypothetical protein OsI_12475 [Oryza sativa Indica Group]
Length = 323
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 208/300 (69%), Positives = 241/300 (80%), Gaps = 22/300 (7%)
Query: 64 LFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGK 123
L +VQPRL+P + L +KL EAL LANSLEE RDG++ K PPH+VVQNPS + G+
Sbjct: 42 LLVVQPRLRPGSLLDSKLAEALNLANSLEEPRDGFYKEGLAAKGAPPHLVVQNPSSR-GR 100
Query: 124 ARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
+ D FFGPGTV+ +KC++ +ES E AWGKPVLDRVGLI
Sbjct: 101 SHVDKFFGPGTVDNVKCYLRTSES---------------------EVAWGKPVLDRVGLI 139
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
IEIFNAHA TKEAKLQ+ELAALMY K+RL+RVRGP GRLTFG +GEAEVVSARGRGSGGR
Sbjct: 140 IEIFNAHAETKEAKLQSELAALMYMKTRLIRVRGPGGRLTFGSSGEAEVVSARGRGSGGR 199
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
GFISGAGETELQLQRRRI ERR LL+QIE+VRRTRA+QR+ R+RHG S G+ L TVAVV
Sbjct: 200 GFISGAGETELQLQRRRIQERRVRLLAQIEDVRRTRAIQRSNRKRHGNSFGQELVTVAVV 259
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQL 363
GYTNAGKSTLVSALS++DL+SD RLFAT+DPRL+SV+LPSGRK LLSDTVGFISDLP+Q+
Sbjct: 260 GYTNAGKSTLVSALSETDLYSDDRLFATVDPRLRSVILPSGRKALLSDTVGFISDLPVQV 319
>gi|242033107|ref|XP_002463948.1| hypothetical protein SORBIDRAFT_01g009434 [Sorghum bicolor]
gi|241917802|gb|EER90946.1| hypothetical protein SORBIDRAFT_01g009434 [Sorghum bicolor]
Length = 263
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 196/244 (80%), Gaps = 7/244 (2%)
Query: 23 PIS--LHSYSYSSSKRQ--TKDNKDKDDLHDVVTLF--NRDPDDPPRLFLVQPRLKPPTF 76
P+S L + S KR T D DD + LF +RDP+ PPRL +VQPRL+P +
Sbjct: 21 PVSPYLRALSTRRGKRSSPTVSPADSDDEGPLRGLFVLSRDPECPPRLLVVQPRLRPGSL 80
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVE 136
L +KL EAL LANSLEE RDG++ ++F K PPH+VVQNP+ + G++ ADT+FGPGTV+
Sbjct: 81 LDSKLAEALNLANSLEEPRDGFYHSEFGAKGAPPHLVVQNPASR-GRSHADTYFGPGTVD 139
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
+KC++ +ES+ ++DA+FVNAILSGIQQRNLE AWGKPVLDRVGLIIEIFNAHA TKEA
Sbjct: 140 NVKCYLRASESEEDVDAVFVNAILSGIQQRNLEVAWGKPVLDRVGLIIEIFNAHAETKEA 199
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ+ELAALMY K+RLVRVRGP GRLTFG +GEAEVVSARGRGSGGRGF+SGAGETELQL
Sbjct: 200 KLQSELAALMYMKTRLVRVRGPGGRLTFGPSGEAEVVSARGRGSGGRGFMSGAGETELQL 259
Query: 257 QRRR 260
QRRR
Sbjct: 260 QRRR 263
>gi|307104847|gb|EFN53099.1| hypothetical protein CHLNCDRAFT_137429 [Chlorella variabilis]
Length = 609
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 188/356 (52%), Positives = 233/356 (65%), Gaps = 38/356 (10%)
Query: 81 LNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKC 140
L EA LA SLE Y + P +PS TFFG G VE ++
Sbjct: 11 LLEACKLAESLEGTAPEYVQVGSASRLRP------SPS---------TFFGRGQVEAVQA 55
Query: 141 HINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQA 200
+ + +FVN +LSG+QQRNLERA +PVLDRV LIIEIF+ A T EA+LQ
Sbjct: 56 RVAATQP----HRVFVNHVLSGVQQRNLERALQRPVLDRVALIIEIFSQRARTAEARLQV 111
Query: 201 ELAALMYKKSRLVRV--RGPDGRLTFGETGEA-EVVSAR-----GRGSGGRGFISGAGET 252
ELA+L YK SRLVRV R FG GEA E+VSAR G G+GG G G GE+
Sbjct: 112 ELASLEYKASRLVRVVDAATGKRAAFGLAGEASEIVSARERGRSGSGAGGLGGAGGQGES 171
Query: 253 ELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKST 312
ELQLQRRR+ +RR LL ++EEVR+TR VQRAARRR G VA+VGYTNAGKS+
Sbjct: 172 ELQLQRRRVADRRKQLLRKLEEVRKTRGVQRAARRRSGKPQ------VAIVGYTNAGKSS 225
Query: 313 LVSALS---DSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLVDAFH 368
L+SALS +++ + +LFATLDP L+ V+LP SGR V+LSDTVGFISDLP QL++AF
Sbjct: 226 LLSALSKCGEAEAGVEDKLFATLDPTLRRVMLPGSGRDVVLSDTVGFISDLPTQLIEAFQ 285
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK-NMIEVWNKID 423
ATLEEV EADLL+HVLD ++P + + R VL VL+ +GV E +L+ +IEVWNK+D
Sbjct: 286 ATLEEVTEADLLLHVLDASSPQVLQQRAAVLGVLRGLGVPEARLREGVIEVWNKMD 341
>gi|302771868|ref|XP_002969352.1| hypothetical protein SELMODRAFT_91633 [Selaginella moellendorffii]
gi|300162828|gb|EFJ29440.1| hypothetical protein SELMODRAFT_91633 [Selaginella moellendorffii]
Length = 334
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 176/321 (54%), Positives = 224/321 (69%), Gaps = 21/321 (6%)
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
+LF+VQPR PP L+AKL EAL LANSL +DF P +V+VQ
Sbjct: 28 KLFVVQPRFHPPLLLKAKLLEALRLANSLAPLTATDLKSDF-----PSYVLVQGRR---- 78
Query: 123 KARADTFFGPGTVETIKCHINGAESKG-ELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
K A T+FG GT++ I+ H+N + + E+DA+FVN LSG+QQRNLE AW +PVLDRVG
Sbjct: 79 KINAGTYFGAGTIDNIRTHLNVIDVEDREIDAVFVNTSLSGVQQRNLEDAWERPVLDRVG 138
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LIIEIF + A +KEAKLQ ELAAL +K++RL+R +G R FG GE EVVSARG G
Sbjct: 139 LIIEIFGSRARSKEAKLQVELAALDFKRTRLIREKGE--RKAFGAGGEQEVVSARGASGG 196
Query: 242 GRGFISGAG-ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
G + E+ELQLQRRRI +++ + + + ++TR++ R R G+ V
Sbjct: 197 GGRGFTSGSGESELQLQRRRISDQKHKIQVALAKAKQTRSLHRRNRE--------GIPLV 248
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AVVGYTNAGKSTLV ALS S L+SD RLFATLD +++SV+LPSGR+VL+SDTVGFISDLP
Sbjct: 249 AVVGYTNAGKSTLVGALSKSSLYSDDRLFATLDTQVRSVILPSGRRVLVSDTVGFISDLP 308
Query: 361 LQLVDAFHATLEEVVEADLLV 381
QLV+AFHATLEEVV AD+++
Sbjct: 309 TQLVEAFHATLEEVVAADIVL 329
>gi|384249127|gb|EIE22609.1| hypothetical protein COCSUDRAFT_63755 [Coccomyxa subellipsoidea
C-169]
Length = 706
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 188/399 (47%), Positives = 230/399 (57%), Gaps = 53/399 (13%)
Query: 49 DVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKEL 108
D++TL D +V PR +PP ++Q EA+ LA S Y
Sbjct: 10 DLITLRGFASDPCRSCVMVHPRAQPPPYVQ----EAMRLAES-------YAGAHC----- 53
Query: 109 PPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNL 168
+ PS S A FFG G VE++K + + +FVN +LSG+QQRNL
Sbjct: 54 --KSIAVGPSRGSPPTSA-AFFGSGAVESLKGQLAALDPH----TVFVNCMLSGVQQRNL 106
Query: 169 ERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVR-VRGPDG-RLTFGE 226
E AW +PV DRVGLII+IF A T+EA+LQ E+A+L YK SRLVR V G R FGE
Sbjct: 107 EAAWQRPVTDRVGLIIKIFAQRARTREARLQVEMASLDYKVSRLVRSVDAATGQRAGFGE 166
Query: 227 TGEAEVVSARGRGSGGRGFISGAG-----ETELQLQRRRILERRSHLLSQIEEVRRTRAV 281
G EVVSAR RG G G ETELQLQRRRI R L Q+ EVR+TR
Sbjct: 167 GGLTEVVSARERGRSGGTSGGLGGSAGGGETELQLQRRRIRARIKALKRQLAEVRQTRVT 226
Query: 282 QRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL 341
QRA R R G AVVGYTNAGKS+LVSALS D+ RLF TLDP ++ V+L
Sbjct: 227 QRAGRLRAGKP------VCAVVGYTNAGKSSLVSALSGDDVGVQDRLFETLDPTMRQVML 280
Query: 342 PSGRKVLLSDTVGFISDLPLQLVDAFH----------------ATLEEVVEADLLVHVLD 385
PSGR +LSDTVGFISDLP L+ AF ATLEEVVEADLL+HV+D
Sbjct: 281 PSGRGAILSDTVGFISDLPPSLIKAFQASNLTLYNIRILCPVLATLEEVVEADLLLHVMD 340
Query: 386 CTAPNLEEHRTTVLQVLQQVGVSEEKL-KNMIEVWNKID 423
++ + + R VL VL+++GVSE +L K++IEV NK D
Sbjct: 341 GSSEQMLQQRDAVLAVLRRLGVSEMRLQKSLIEVVNKSD 379
>gi|407775001|ref|ZP_11122297.1| GTPase [Thalassospira profundimaris WP0211]
gi|407281949|gb|EKF07509.1| GTPase [Thalassospira profundimaris WP0211]
Length = 392
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 159/377 (42%), Positives = 216/377 (57%), Gaps = 47/377 (12%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
K R T FG G E + I E+ D + +N LS IQQRNLER W V+DR G
Sbjct: 9 AKLRPSTLFGKGVTERLGLQIKAIEA----DIVMINGQLSPIQQRNLEREWKCKVIDRTG 64
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A T+E +LQ +LA L Y++SRLVR T E R G
Sbjct: 65 LILEIFADRARTREGRLQVQLALLSYQRSRLVRT------WTHLE-----------RQRG 107
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
GRGF++G GE ++++ RR I ++ + L ++EEV+RTR + R ARRR VA
Sbjct: 108 GRGFLAGPGERQIEIDRRLIGDKLAKLRRELEEVKRTRELHREARRRVP------YPIVA 161
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPL 361
+VGYTNAGKSTL + L+ S++F++ LFATLDP ++ ++LPSGRKV+LSDTVGF+SDLP
Sbjct: 162 LVGYTNAGKSTLFNQLTVSEVFAEDMLFATLDPTMRGLILPSGRKVILSDTVGFVSDLPH 221
Query: 362 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE-KLKNMIEVWN 420
LV AF ATLEEV+EADL+VHV D +P EE + VL+VL+++G+ + + ++E N
Sbjct: 222 DLVAAFRATLEEVLEADLIVHVRDVASPETEEQKLDVLEVLKELGLQKAIDGEELVEALN 281
Query: 421 KID-YHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSED 479
KID EE+ +S +S D I G + D G + +
Sbjct: 282 KIDQLKGEEL--------QAVSEYSARHDNTI--------AISAIKGTNCDALLGLIEDR 325
Query: 480 LGESMN--KNHNDYSDG 494
L E M + YSDG
Sbjct: 326 LTEDMPVFELCVPYSDG 342
>gi|407769132|ref|ZP_11116509.1| GTPase [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288052|gb|EKF13531.1| GTPase [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 459
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 240/449 (53%), Gaps = 69/449 (15%)
Query: 59 DDPPRLFLVQPRLKPPTFL------QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHV 112
DD PR+ + P LK ++L EA+ L G D + E+ P
Sbjct: 25 DDSPRVLVFHPELKRADQAGSWRDASSRLEEAVSLT--------GALDFEVVGAEVVP-- 74
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
K R T FG G VE + I E+ D + +N LS IQQRNLER W
Sbjct: 75 --------IAKTRPATLFGTGVVERLGNQIKAEEA----DIVMINGQLSPIQQRNLEREW 122
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T+E +LQ +LA L Y+KSRLVR T E
Sbjct: 123 KCKVIDRTGLILEIFADRARTREGRLQVQLALLSYQKSRLVRT------WTHLE------ 170
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GGRGF++G GE ++++ RR I ++ + L ++EEV+RTR + R ARRR
Sbjct: 171 -----RQRGGRGFLAGPGERQIEIDRRLIGDKLAKLRRELEEVKRTRELHREARRRVP-- 223
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + L+ SD+F++ LFATLDP ++ + LPSGRKV+LSDT
Sbjct: 224 ----YPIVALVGYTNAGKSTLFNQLTVSDVFAEDMLFATLDPTMRGLELPSGRKVILSDT 279
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE-K 411
VGF+SDLP LV AF ATLEEV+EADL+VHV D ++ E + VL+VL+ +G+ +
Sbjct: 280 VGFVSDLPHDLVAAFRATLEEVLEADLIVHVRDASSHEAEAQKLDVLEVLKALGLQKAID 339
Query: 412 LKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN 471
+ ++E NK D ++G+D++ ++ ++ + I G + D
Sbjct: 340 GEELVEALNKCD----------QLEGEDLTAV-----QEYSARNANTIAISAIKGTNCDA 384
Query: 472 NDGFVSEDLGESMN--KNHNDYSDGWLLS 498
+ + L E M + YSDG L+
Sbjct: 385 LLALIEDRLTEDMPVFELLVPYSDGKALA 413
>gi|302774533|ref|XP_002970683.1| hypothetical protein SELMODRAFT_441252 [Selaginella moellendorffii]
gi|300161394|gb|EFJ28009.1| hypothetical protein SELMODRAFT_441252 [Selaginella moellendorffii]
Length = 2376
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 183/441 (41%), Positives = 244/441 (55%), Gaps = 75/441 (17%)
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
+LF+VQPR PP L+AKL EAL LANSL +DF P +V+VQ
Sbjct: 28 KLFVVQPRFHPPLLLKAKLLEALRLANSLAPLTATDLKSDF-----PSYVLVQGRR---- 78
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K A T+FG GT++ I+ H LD I ++E AW +PVLDRVGL
Sbjct: 79 KINAGTYFGAGTIDNIRTH---------LDVI------------DVEDAWERPVLDRVGL 117
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
IIEIF + A +KEAKLQ ELAAL +K++RL+R +G R FG GE EV S S
Sbjct: 118 IIEIFGSRARSKEAKLQVELAALDFKRTRLIREKGE--RKAFGAGGEQEVESKWWWWSRI 175
Query: 243 RGFISGAGETELQLQ-RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
I G + RI +++ + + + ++TR++ R R G+ VA
Sbjct: 176 YERIRRVGIAATTTEFSTRISDQKHKIQLALAKAKQTRSLHRRNRE--------GIPLVA 227
Query: 302 VVGY----------TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
V Y T GKSTLV ALS S L+SD RLFATLD +++SV+LPSGR+VL+SD
Sbjct: 228 VSCYALIAEKQDSSTLQGKSTLVGALSKSSLYSDDRLFATLDTQVRSVILPSGRRVLVSD 287
Query: 352 TVGFISDLPLQ-------------------LVDAFHATLEEVVEADLLVHVLDCTAPNLE 392
TVGFISDLP Q LV+AFHATLEEVV AD+++HV+D +APN++
Sbjct: 288 TVGFISDLPTQVCEDSQALNIYLCLREFWKLVEAFHATLEEVVAADIVLHVMDSSAPNMD 347
Query: 393 EHRTTVLQVLQQVGVSEEKL-KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDT 451
E R VL+VL ++GVS++ L + IEV NKID H + GD++ G + + D+D
Sbjct: 348 EQREAVLKVLGEIGVSQQDLDEKTIEVMNKIDVH-PDCGDLDLPAGLLLCD---GNDEDA 403
Query: 452 TSEPVDVECIDNYGGDDADNN 472
P E G +A +N
Sbjct: 404 LVIPSSEEYRKAVGAANALSN 424
>gi|114569999|ref|YP_756679.1| small GTP-binding protein [Maricaulis maris MCS10]
gi|114340461|gb|ABI65741.1| GTP-binding protein HflX [Maricaulis maris MCS10]
Length = 450
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 204/353 (57%), Gaps = 49/353 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA LA +L D E+ ++Q + SG+ +FG G ++
Sbjct: 26 EARLEEAYGLAEAL-------------DLEVGAAFILQTRKIDSGR-----YFGRGKLDE 67
Query: 138 IKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
+ I GEL+A ++ LS IQQRNLE AW V+DR GLI+EIF A TKE
Sbjct: 68 LGAMI------GELEANVAVIDTNLSPIQQRNLENAWNVKVIDRTGLILEIFGQRARTKE 121
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
LQ ELA L Y++SRLVR T E R GGRGF++G GET+++
Sbjct: 122 GVLQVELARLAYERSRLVRT------WTHLE-----------RQRGGRGFLAGPGETQIE 164
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + L Q++EVRRTRA+ R+ R+ TVA+VGYTNAGKSTL +
Sbjct: 165 TDRRLLNEKMAKLRRQLDEVRRTRALHRSQRQ------DVPFPTVALVGYTNAGKSTLFN 218
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
L+ + +F+ FATLDP +++V LP G ++LLSDTVGFI+DLP +L+ AF ATLEEV
Sbjct: 219 KLTGAGVFAQDMPFATLDPTVRAVDLPGGTRILLSDTVGFITDLPTELIAAFRATLEEVR 278
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
EADLLVH++D + P+ E V VL + + M+E WNK D D+E
Sbjct: 279 EADLLVHIIDASDPDREGRIQDVESVLDAIEAGPAHDQAMLEAWNKSDRLDDE 331
>gi|114771148|ref|ZP_01448588.1| GTP-binding protein HflX [Rhodobacterales bacterium HTCC2255]
gi|114548430|gb|EAU51316.1| GTP-binding protein HflX [alpha proteobacterium HTCC2255]
Length = 417
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 214/373 (57%), Gaps = 51/373 (13%)
Query: 81 LNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKC 140
L EA+ LAN+L D + + + P LK K A T FG G +
Sbjct: 23 LEEAVSLANAL--------DIEILHEAVIP--------LK--KPNAGTLFGSGKL----L 60
Query: 141 HINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQA 200
++ ++D + ++ L+ IQQRNLE+ W VLDR GLI+EIF A T+E LQ
Sbjct: 61 ELSQIFKSNDIDLVIIDGPLTPIQQRNLEKEWNLKVLDRTGLILEIFGDRAQTREGVLQV 120
Query: 201 ELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRR 260
+LAAL Y++SRLVR + R GG FI GAGET+++ RR+
Sbjct: 121 DLAALNYQRSRLVRTW-----------------THLERQRGGLSFIGGAGETQIESDRRQ 163
Query: 261 ILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDS 320
I + L Q+E+V +TR + R+AR++ VA+VGYTNAGKSTL + ++ +
Sbjct: 164 IDDAILRLKKQLEKVVKTRELHRSARKKIP------YPIVALVGYTNAGKSTLFNYMTGA 217
Query: 321 DLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLL 380
+F+ LFATLDP ++ V LPSG+K++LSDTVGFIS+LP QL+ AF ATLEEV++A+L+
Sbjct: 218 KVFAKDMLFATLDPTMREVELPSGQKIILSDTVGFISELPTQLIAAFRATLEEVLDANLI 277
Query: 381 VHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDI 440
+HV D + P E V +L+++ VS+ N++EVWNK D + + E I+ +I
Sbjct: 278 LHVRDISHPETEAQANDVNDILEELDVSDNTKSNILEVWNKTDL----LSNDELINAKNI 333
Query: 441 SNFSRAEDKDTTS 453
S+ R+E T S
Sbjct: 334 SD--RSEKIRTVS 344
>gi|83858322|ref|ZP_00951844.1| GTP-binding protein HflX [Oceanicaulis sp. HTCC2633]
gi|83853145|gb|EAP90997.1| GTP-binding protein HflX [Oceanicaulis sp. HTCC2633]
Length = 443
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 201/346 (58%), Gaps = 45/346 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
QA+L EA+ LA +L D + + P V+ A FFG G +
Sbjct: 27 QARLEEAIGLAQAL--------DLVTAEARIEPLRRVE----------ASGFFGTGKIAQ 68
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + AE + + ++A LS IQQRNLE+ V+DR GLI+EIF A T+E +
Sbjct: 69 IAERVKDAE----ITVVIIDAALSPIQQRNLEKKLNAKVIDRTGLILEIFGLRAQTREGR 124
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GGRGF++G GET+++
Sbjct: 125 LQVELARLAYERSRLVRT------WTHLE-----------RQRGGRGFLAGPGETQIETD 167
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR + ++ + L +++EV+RTR++ R R+ TVA+VGYTNAGKSTL + L
Sbjct: 168 RRILADKMAKLRRELDEVKRTRSLHRKKRQTAP------WPTVALVGYTNAGKSTLFNLL 221
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
SD+ + + FATLDP ++ V LPSGR+VL+SDTVGFI+DLP +L+ AF ATLEEV+EA
Sbjct: 222 SDAQVLAKDMPFATLDPTVRGVKLPSGRRVLMSDTVGFITDLPTELIAAFRATLEEVIEA 281
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
D+L+HV D P+ E + V VL +G E +++IE WNK D
Sbjct: 282 DVLIHVRDMADPDHEGRKADVESVLAALGAGAEADQHVIEAWNKAD 327
>gi|427431603|ref|ZP_18920946.1| GTP-binding protein HflX [Caenispirillum salinarum AK4]
gi|425877751|gb|EKV26482.1| GTP-binding protein HflX [Caenispirillum salinarum AK4]
Length = 433
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 155/374 (41%), Positives = 215/374 (57%), Gaps = 45/374 (12%)
Query: 60 DPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSL 119
DP R +V P +K + ++A LEE + D +V +
Sbjct: 10 DPARCLVVHPAIKQ----RGTNDDARDPTERLEEAKGLALAIDLN--------IVHGEVV 57
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K R TF G G VE ++ I E++ + ++ LS +QQRNLER W V+DR
Sbjct: 58 TLNKPRPATFLGEGQVERLQSIIED----NEVEVVVMDCHLSPVQQRNLERNWKTKVIDR 113
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
GLI+EIF A T+E +LQ ELA L Y++SRLVR T E R
Sbjct: 114 TGLILEIFGERARTREGQLQVELAHLSYQRSRLVR------SWTHLE-----------RQ 156
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG GF+ G GET++++ RR I ER + L ++EEV+RTR + R ARRR
Sbjct: 157 RGGAGFMGGPGETQIEIDRRLISERITRLKKELEEVKRTRNLHREARRR------VPYPI 210
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
VA+VGYTNAGKSTL + L+ S++++ +LFATLDP ++ +VLPSG++V+LSDTVGF+SDL
Sbjct: 211 VALVGYTNAGKSTLFNRLTKSEVYAQDQLFATLDPTMRGLVLPSGKQVILSDTVGFVSDL 270
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ-QVGVSEEKLKNMIEV 418
P +LV AFHATLEEV+EAD++VHV D +P+ + V VL+ ++ + EE ++E
Sbjct: 271 PHELVAAFHATLEEVLEADVIVHVRDAHSPDTAAQKADVEHVLRVELNLGEEVDAGLLEA 330
Query: 419 WNKIDY-----HDE 427
NKID HDE
Sbjct: 331 MNKIDLLAPEAHDE 344
>gi|46202523|ref|ZP_00053076.2| COG2262: GTPases [Magnetospirillum magnetotacticum MS-1]
Length = 421
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 209/353 (59%), Gaps = 49/353 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA G D D +V ++ K R T G G VE
Sbjct: 17 EARLAEAVGLA--------GAIDLD----------IVAAEAVNVAKLRPATLMGKGAVER 58
Query: 138 IKCHINGAESKGELDAIF--VNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
+ AE E D V+ LS +QQRNLE+AWG V+DR GLI+EIF A A T+E
Sbjct: 59 L------AELVEERDVALAVVDCHLSPVQQRNLEKAWGCKVIDRTGLILEIFGARARTRE 112
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
LQ ELAAL Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 113 GTLQVELAALSYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIE 155
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR I ER L ++E+V+RTR + R ARR+ VA+VGYTNAGKSTL +
Sbjct: 156 ADRRMIGERIVKLERELEDVKRTRDLHRKARRKVP------YPIVALVGYTNAGKSTLFN 209
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
L+ +++ + LFATLDP ++++VLPSGRK++LSDTVGFISDLP +LV AF ATLEEV+
Sbjct: 210 QLTRAEVLAKDMLFATLDPTMRTLVLPSGRKIILSDTVGFISDLPHELVAAFRATLEEVL 269
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
EAD++VHV D + P+ E V VL+++G++E + ++E NKID DEE
Sbjct: 270 EADIVVHVRDISHPDTEAQSADVDTVLKELGLAEVVDRGLVEALNKIDLLDEE 322
>gi|83311472|ref|YP_421736.1| GTPase [Magnetospirillum magneticum AMB-1]
gi|82946313|dbj|BAE51177.1| GTPase [Magnetospirillum magneticum AMB-1]
Length = 435
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 160/373 (42%), Positives = 214/373 (57%), Gaps = 52/373 (13%)
Query: 61 PPRLFLVQPRLKPP---TFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R +V P K +A+L EA+ LA G + D +V
Sbjct: 11 PSRAMVVHPAFKGGEGNRLPEARLAEAVGLA--------GAINLD----------IVAAE 52
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIF--VNAILSGIQQRNLERAWGKP 175
++ K R T G G VE + AE E D V+ L+ +QQRNLE+AWG
Sbjct: 53 AVNVSKVRPATLIGKGAVERL------AELVEERDIALAVVDGHLTPVQQRNLEKAWGCK 106
Query: 176 VLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSA 235
V+DR GLI+EIF A A T+E LQ ELAAL Y++SRLVR T E
Sbjct: 107 VIDRTGLILEIFGARARTREGTLQVELAALSYQRSRLVR------SWTHLE--------- 151
Query: 236 RGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGR 295
R GG GF+ G GET+++ RR I ER L ++E+V+RTR + R ARRR
Sbjct: 152 --RQRGGFGFLGGPGETQIEADRRMIGERIVKLERELEDVKRTRDLHRKARRRVP----- 204
Query: 296 GLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ +VLPSGRK++LSDTVGF
Sbjct: 205 -YPIVALVGYTNAGKSTLFNQLTRAEVLAKDMLFATLDPTMRDLVLPSGRKIILSDTVGF 263
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
ISDLP +LV AF ATLEEV+EAD++VHV D + P+ E V VL+++G++E + +
Sbjct: 264 ISDLPHELVAAFRATLEEVLEADVVVHVRDVSHPDTEAQAADVDTVLKELGLAEVVDRGL 323
Query: 416 IEVWNKIDYHDEE 428
+E NKID D+E
Sbjct: 324 VEALNKIDLLDDE 336
>gi|374294463|ref|YP_005041488.1| putative GTP-binding protein (HflX-like) [Azospirillum lipoferum
4B]
gi|357428461|emb|CBS91419.1| Putative GTP-binding protein (HflX-like) [Azospirillum lipoferum
4B]
Length = 448
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 149/350 (42%), Positives = 204/350 (58%), Gaps = 42/350 (12%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A L EA+ LA ++E + V Q +K + R T G G +E
Sbjct: 39 EASLEEAVGLAAAIELE------------------VAQAAVVKVNQPRPATLLGGGAIEQ 80
Query: 138 IKCHINGAESKGE-LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
++ A GE +D + V+ L+ +QQRNLE+A+G V+DR GLI+EIF A A T E
Sbjct: 81 YAKLLDDAREAGEDIDLVIVDHALTPVQQRNLEKAFGTKVIDRTGLILEIFGARARTHEG 140
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
+LQ ELA+L Y+KSRLVR T E R GG GF+ G GE++L++
Sbjct: 141 QLQVELASLTYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGESQLEI 183
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I R + ++++VRRTR + R AR + VA+VGYTNAGKSTL +
Sbjct: 184 DRRLIGNRIVKIKRELDDVRRTRGLHRKARAK------VPYPVVALVGYTNAGKSTLFNR 237
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVE 376
++ +D+F+ LFATLDP ++ VVLPSGRKV+LSDTVGFISDLP LV AF ATLEEV
Sbjct: 238 MAGADVFAKNLLFATLDPTMRQVVLPSGRKVILSDTVGFISDLPTHLVAAFRATLEEVQS 297
Query: 377 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
AD+++HV D P+ E + V +L +G+ E+ ++EV NKID D
Sbjct: 298 ADIILHVRDIAHPDTEAQKADVEAILTDLGIDPERDPRVVEVSNKIDLLD 347
>gi|298291760|ref|YP_003693699.1| GTP-binding proten HflX [Starkeya novella DSM 506]
gi|296928271|gb|ADH89080.1| GTP-binding proten HflX [Starkeya novella DSM 506]
Length = 463
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 201/343 (58%), Gaps = 36/343 (10%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I + E+ +FV+A L+ +QQRNLE+AW V+DR LI+
Sbjct: 80 RPATYLGTGKVEEIAGVVKAEEA----GLVFVDAPLTPVQQRNLEKAWSAKVIDRTALIL 135
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y++SRLVR T E R GG G
Sbjct: 136 EIFGQRARTKEGVLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 178
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER + ++E+V+RTRA+ RA+R++ VA+VG
Sbjct: 179 FLGGPGETQIEADRRLIGERILKIERELEQVKRTRALHRASRKKVP------YPVVALVG 232
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ SD+ + LFATLDP L++V LPSG +++LSDTVGFISDLP QLV
Sbjct: 233 YTNAGKSTLFNRLTRSDVMAQDLLFATLDPTLRAVQLPSGERIILSDTVGFISDLPTQLV 292
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EADL++HV D + + E V VL + + E +IEVWNKID
Sbjct: 293 AAFRATLEEVIEADLILHVRDMSHEDAEAQAHDVEAVLSDLDIDPEDDHRVIEVWNKIDR 352
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 467
DEE G F+ AE ++ + P+ V + G D
Sbjct: 353 LDEE-GRARL--------FNTAERREGDARPIPVSALTGEGVD 386
>gi|294677339|ref|YP_003577954.1| GTP-binding proten HflX [Rhodobacter capsulatus SB 1003]
gi|294476159|gb|ADE85547.1| GTP-binding proten HflX [Rhodobacter capsulatus SB 1003]
Length = 427
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 156/375 (41%), Positives = 219/375 (58%), Gaps = 55/375 (14%)
Query: 59 DDPPRLFLVQPRLKP------PTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHV 112
D P R++++ P LK P +L EA+ LA +L D ++ H
Sbjct: 9 DRPTRVWVLHPDLKAVDARREPEL---RLAEAVSLAAALP------------DLQIMGHE 53
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V+ P K A FG G + +K + AE +D + V+ +S IQQRNLE+ W
Sbjct: 54 IVRLP-----KPHAGHLFGTGKMAELKERLQAAE----VDLVLVDGPVSPIQQRNLEKEW 104
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G +LDR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 105 GVKLLDRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTHLE------ 152
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ++ L Q+ +V +TR + RAARR+
Sbjct: 153 -----RQRGGFGFVGGPGETQIEADRRAIDDQVIRLKRQLAKVVKTRELHRAARRK---- 203
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKS+L + ++ +++ + LFATLDP ++ +VLPSGR+++LSDT
Sbjct: 204 --VPFPIVALVGYTNAGKSSLFNRMTGAEVLAKDMLFATLDPTMRGLVLPSGRRIILSDT 261
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFISDLP +LV AF ATLEEV+EADL++HV D + P EE V ++L+ +GV+E+
Sbjct: 262 VGFISDLPHELVAAFRATLEEVLEADLILHVRDISHPETEEQAEDVGEILESLGVAED-- 319
Query: 413 KNMIEVWNKIDYHDE 427
+IEVWNKID E
Sbjct: 320 VALIEVWNKIDALSE 334
>gi|452964778|gb|EME69812.1| GTPase [Magnetospirillum sp. SO-1]
Length = 435
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 155/369 (42%), Positives = 213/369 (57%), Gaps = 48/369 (13%)
Query: 61 PPRLFLVQPRLKP---PTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R +V P K +A+L EA+ LA G D D +V
Sbjct: 11 PSRALVVHPAFKGGEGSRLPEARLAEAVGLA--------GAIDLD----------IVAAE 52
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
++ K R T G G VE + + + E+ V+ LS +QQRNLE+AWG V+
Sbjct: 53 AVNVAKVRPATLMGKGAVERLAELVE----EREIALAVVDGHLSPVQQRNLEKAWGCKVI 108
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A A T+E LQ ELAAL Y++SRLVR T E
Sbjct: 109 DRTGLILEIFGARARTREGTLQVELAALSYQRSRLVR------SWTHLE----------- 151
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I +R L ++++V+RTR + R ARR+
Sbjct: 152 RQRGGFGFLGGPGETQIEADRRMIGDRIIKLERELDDVKRTRDLHRKARRKVP------Y 205
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++++VLPSGRK++LSDTVGFIS
Sbjct: 206 PIVALVGYTNAGKSTLFNQLTRAEVMAKDMLFATLDPTMRTLVLPSGRKIILSDTVGFIS 265
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
DLP +LV AF ATLEEV+EAD++VHV D + P+ E V VL+++G++E + ++E
Sbjct: 266 DLPHELVAAFRATLEEVLEADVVVHVRDVSHPDTEAQAADVDTVLRELGLAEVVDRGLVE 325
Query: 418 VWNKIDYHD 426
NKID D
Sbjct: 326 ALNKIDLLD 334
>gi|221639215|ref|YP_002525477.1| HSR1-like GTP-binding protein [Rhodobacter sphaeroides KD131]
gi|221159996|gb|ACM00976.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides KD131]
Length = 447
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/367 (41%), Positives = 209/367 (56%), Gaps = 49/367 (13%)
Query: 61 PPRLFLVQPRLKPPT---FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R F++ P ++ +L EA+ LA +L D E+ VV+ P
Sbjct: 31 PMRAFVLHPDIRTERSRRLPDLRLAEAVSLAAALP------------DMEIVGQEVVRLP 78
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
+ G FG G VE +K NG + + + V+ +S +QQRNLE+ WG +L
Sbjct: 79 RAQPG-----LLFGTGKVEELKARFNGLD----VGLVLVDGPVSPVQQRNLEKEWGVKLL 129
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 130 DRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTHLE----------- 172
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I E+ + Q+++V +TR + RA+RR+
Sbjct: 173 RQRGGLGFVGGPGETQIEADRRAIDEQVIRIRRQLDKVVKTRELHRASRRKVP------F 226
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ V LPSGRKV+LSDTVGFIS
Sbjct: 227 PIVALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKVILSDTVGFIS 286
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
DLP QLV AF ATLEEV+EADL++HV D P E V ++LQ +GV + +E
Sbjct: 287 DLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGV--KGATPQVE 344
Query: 418 VWNKIDY 424
VWNK+D
Sbjct: 345 VWNKLDL 351
>gi|126462218|ref|YP_001043332.1| small GTP-binding protein [Rhodobacter sphaeroides ATCC 17029]
gi|126103882|gb|ABN76560.1| small GTP-binding protein [Rhodobacter sphaeroides ATCC 17029]
Length = 447
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/367 (41%), Positives = 209/367 (56%), Gaps = 49/367 (13%)
Query: 61 PPRLFLVQPRLKPPT---FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R F++ P ++ +L EA+ LA +L D E+ VV+ P
Sbjct: 31 PMRAFVLHPDIRTERSRRLPDLRLAEAVSLAAALP------------DMEIVGQEVVRLP 78
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
+ G FG G VE +K NG + + + V+ +S +QQRNLE+ WG +L
Sbjct: 79 RAQPG-----LLFGTGKVEELKARFNGLD----VGLVLVDGPVSPVQQRNLEKEWGVKLL 129
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 130 DRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTHLE----------- 172
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I E+ + Q+++V +TR + RA+RR+
Sbjct: 173 RQRGGLGFVGGPGETQIEADRRAIDEQVIRIRRQLDKVVKTRELHRASRRKVP------F 226
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ V LPSGRKV+LSDTVGFIS
Sbjct: 227 PIVALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKVILSDTVGFIS 286
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
DLP QLV AF ATLEEV+EADL++HV D P E V ++LQ +GV + +E
Sbjct: 287 DLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGV--KGATPQVE 344
Query: 418 VWNKIDY 424
VWNK+D
Sbjct: 345 VWNKLDL 351
>gi|332558240|ref|ZP_08412562.1| small GTP-binding protein [Rhodobacter sphaeroides WS8N]
gi|332275952|gb|EGJ21267.1| small GTP-binding protein [Rhodobacter sphaeroides WS8N]
Length = 447
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/367 (41%), Positives = 209/367 (56%), Gaps = 49/367 (13%)
Query: 61 PPRLFLVQPRLKPPT---FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R F++ P ++ +L EA+ LA +L D E+ VV+ P
Sbjct: 31 PMRAFVLHPDIRTERSRRLPDLRLAEAVSLAAALP------------DMEIVGQEVVRLP 78
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
+ G FG G VE +K NG + + + V+ +S +QQRNLE+ WG +L
Sbjct: 79 RAQPG-----LLFGTGKVEELKARFNGLD----VGLVLVDGPVSPVQQRNLEKEWGVKLL 129
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 130 DRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTHLE----------- 172
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I E+ + Q+++V +TR + RA+RR+
Sbjct: 173 RQRGGLGFVGGPGETQIEADRRAIDEQVIRIRRQLDKVVKTRELHRASRRKVP------F 226
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ V LPSGRKV+LSDTVGFIS
Sbjct: 227 PIVALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKVILSDTVGFIS 286
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
DLP QLV AF ATLEEV+EADL++HV D P E V ++LQ +GV + +E
Sbjct: 287 DLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGV--KGATPQVE 344
Query: 418 VWNKIDY 424
VWNK+D
Sbjct: 345 VWNKLDL 351
>gi|315499852|ref|YP_004088655.1| gtp-binding proten hflx [Asticcacaulis excentricus CB 48]
gi|315417864|gb|ADU14504.1| GTP-binding proten HflX [Asticcacaulis excentricus CB 48]
Length = 448
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 220/400 (55%), Gaps = 58/400 (14%)
Query: 68 QPRLKPPT--FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKAR 125
QP+ P T + +++L+EA LA +L D D +V + + K
Sbjct: 33 QPQGVPATRRYDESRLDEAAGLAIAL--------DLD----------IVAADTARVRKPN 74
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T FG G VE I E+ D + VN L+ IQQRNLE+AW + V+DR GLI+E
Sbjct: 75 PATLFGSGKVEEIVTLCEEVEA----DLVIVNTTLTPIQQRNLEKAWERKVIDRTGLILE 130
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T+E KLQ ELA L Y++SRLVR T E A +
Sbjct: 131 IFGRRARTREGKLQVELARLEYERSRLVRT------WTHLERQRATGTT----------- 173
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GET+++L RR I ++ L ++++VRRTR++ R+AR++ VA+VGY
Sbjct: 174 -GGPGETQIELDRRMIADKIKLLKGELDDVRRTRSLHRSARKKVP------YPIVALVGY 226
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ +++ + LFATLD L+++ LP GR ++SDTVGFISDLP +LV
Sbjct: 227 TNAGKSTLFNHLTRAEVLAKDMLFATLDTTLRTLKLPGGRAAIISDTVGFISDLPHELVA 286
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATLEEV+EADL++HV D + P + V+QVL + +K +IEVWNKID
Sbjct: 287 AFRATLEEVLEADLILHVRDMSNPESDAQAQDVMQVLTHIHPDLDK-SRLIEVWNKIDLL 345
Query: 426 DEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYG 465
DEE D+ Y SRA ++P+ V I G
Sbjct: 346 DEEARDILY---------SRAVLDRAMNKPIMVSAITGEG 376
>gi|365897580|ref|ZP_09435576.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. STM 3843]
gi|365421672|emb|CCE08118.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. STM 3843]
Length = 461
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/306 (46%), Positives = 189/306 (61%), Gaps = 23/306 (7%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
G+ R T+ G G V+ I I G ++ + ++ LS IQQRNLE+AW VLDR G
Sbjct: 75 GQIRPATYLGKGKVDEIAGLIAGQLPGHGIELVVMDCALSPIQQRNLEKAWNTKVLDRTG 134
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A TKE LQ ELA L Y++SRLVR T E R G
Sbjct: 135 LILEIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRG 177
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G GF+ G GET+++ RR I ER S L +++++V+ TR + RA R+R VA
Sbjct: 178 GFGFMGGPGETQIEADRRLISERISRLENELKKVQATRRLHRAGRQR------VPYRVVA 231
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPL 361
+VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP
Sbjct: 232 LVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPT 291
Query: 362 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 421
QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E N+IEVWNK
Sbjct: 292 QLVAAFRATLEEVLEADVILHVRDISHEDAEAQQQDVEMVLSQLGIDPEASDNIIEVWNK 351
Query: 422 IDYHDE 427
+D D+
Sbjct: 352 VDCLDD 357
>gi|154248312|ref|YP_001419270.1| small GTP-binding protein [Xanthobacter autotrophicus Py2]
gi|154162397|gb|ABS69613.1| small GTP-binding protein [Xanthobacter autotrophicus Py2]
Length = 457
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 214/391 (54%), Gaps = 55/391 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
Q++L EA+ LA ++ D D VV + ++ + R TF G G VE
Sbjct: 48 QSRLEEAVGLAAAI--------DLD----------VVYSATIPLSEIRPATFLGSGKVE- 88
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ G +D +F +A LS +QQRNLE+AW V+DR LI+EIF A TKE
Sbjct: 89 ---ELEGVVRAEAVDLVFFDAALSPVQQRNLEKAWSAKVVDRTALILEIFGMRARTKEGA 145
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 146 LQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 188
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + ++E+V+RTR + RA+R+R VA+VGYTNAGKSTL + L
Sbjct: 189 RRLIGERIVRIEKELEQVKRTRGLHRASRKRVP------YPIVALVGYTNAGKSTLFNRL 242
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ +++ + LFATLDP L++V LP G +++LSDTVGFIS+LP QLV AF ATLEEV+EA
Sbjct: 243 TRAEVMAKDLLFATLDPTLRAVDLPHGTRIILSDTVGFISELPTQLVAAFRATLEEVLEA 302
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDG 437
DL++HV D + P+ + V VL+ +GV + +IEVWNKID +
Sbjct: 303 DLILHVRDISHPDTDAQAADVSDVLEDLGVDPQPGGRVIEVWNKID----------RLAP 352
Query: 438 DDISNFSRAEDKDTTSEPVDVECIDNYGGDD 468
D+ + PV V + G DD
Sbjct: 353 DEREQVENRAARGGAEAPVPVSALTGEGTDD 383
>gi|260575069|ref|ZP_05843070.1| GTP-binding proten HflX [Rhodobacter sp. SW2]
gi|259022691|gb|EEW25986.1| GTP-binding proten HflX [Rhodobacter sp. SW2]
Length = 412
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 199/329 (60%), Gaps = 31/329 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + ++ G+ + T FG G V+ +K E +D + V+ +S +QQRNLE+AW
Sbjct: 34 VVGSEVVRVGRMQPGTLFGSGKVDELKARFAALE----VDLVLVDGPVSPVQQRNLEKAW 89
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G +LDR GLI+EIF A T+E +Q ELAAL Y+++RLVR T E
Sbjct: 90 GVKLLDRTGLILEIFADRARTREGVMQVELAALSYQRTRLVRA------WTHLE------ 137
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ++ + Q+E+V +TR + RAARRR
Sbjct: 138 -----RQRGGFGFVGGPGETQIEADRRAIDDQVIRIKRQLEKVVKTRELHRAARRRVP-- 190
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + ++ +++ + LFATLDP ++ +VLPSGRK+++SDT
Sbjct: 191 ----FPLVALVGYTNAGKSTLFNRMTGAEVLAKDMLFATLDPTMRGLVLPSGRKIIISDT 246
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFISDLP QLV AF ATLEEV+EADL++HV D + P E V ++L +GV +
Sbjct: 247 VGFISDLPTQLVAAFRATLEEVLEADLILHVRDISHPESAEQAADVAKILAALGV--KAA 304
Query: 413 KNMIEVWNKIDYHDEEMGD--VEYIDGDD 439
IE+WNK+D M D V+ G D
Sbjct: 305 TPQIEIWNKLDLVQGAMRDGLVQQAQGRD 333
>gi|429206479|ref|ZP_19197745.1| GTP-binding protein HflX [Rhodobacter sp. AKP1]
gi|428190520|gb|EKX59066.1| GTP-binding protein HflX [Rhodobacter sp. AKP1]
Length = 447
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 208/367 (56%), Gaps = 49/367 (13%)
Query: 61 PPRLFLVQPRLKPPT---FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R F++ P ++ +L EA+ LA +L D E+ VV+ P
Sbjct: 31 PMRAFVLHPDIRTERSRRLPDLRLAEAVSLAAALP------------DMEIVGQEVVRLP 78
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
+ G FG G VE +K G + + + V+ +S +QQRNLE+ WG +L
Sbjct: 79 RAQPG-----LLFGTGKVEELKARFKGLD----VGLVLVDGPVSPVQQRNLEKEWGVKLL 129
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 130 DRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTHLE----------- 172
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I E+ + Q+++V +TR + RA+RR+
Sbjct: 173 RQRGGLGFVGGPGETQIEADRRAIDEQVIRIRRQLDKVVKTRELHRASRRKVP------F 226
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ V LPSGRKV+LSDTVGFIS
Sbjct: 227 PIVALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKVILSDTVGFIS 286
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
DLP QLV AF ATLEEV+EADL++HV D P E V ++LQ +GV + +E
Sbjct: 287 DLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGV--KGATPQVE 344
Query: 418 VWNKIDY 424
VWNK+D
Sbjct: 345 VWNKLDL 351
>gi|158424703|ref|YP_001525995.1| GTP-binding protein [Azorhizobium caulinodans ORS 571]
gi|158331592|dbj|BAF89077.1| GTP-binding protein [Azorhizobium caulinodans ORS 571]
Length = 459
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 208/350 (59%), Gaps = 45/350 (12%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D K L V++ + + T+ G G VE
Sbjct: 48 EARLEEAVGLAAAI--------DLDVVYKGL---VLIS-------EVKPATYIGSGKVE- 88
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I G + E+ +FV+A LS +QQRNLE+AW V+DR LI+EIF + A TKE
Sbjct: 89 ---EIAGIVAAEEVGLVFVDAALSPVQQRNLEKAWSAKVVDRTALILEIFGSRARTKEGT 145
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 146 LQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 188
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR+I ER + ++E+V+RTRA+ R +R+R VA+VGYTNAGKSTL + L
Sbjct: 189 RRQIGERIIRIERELEQVKRTRALHRTSRKRVP------YPVVALVGYTNAGKSTLFNRL 242
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ +++ + LFATLDP L++V LP G +V+LSDTVGFIS+LP QLV AF ATLEEV+EA
Sbjct: 243 TQAEVMAQDLLFATLDPTLRAVDLPHGTRVILSDTVGFISELPTQLVAAFRATLEEVIEA 302
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
D+++HV D + P+ + V VL ++G+ E ++EVWNKID E
Sbjct: 303 DVILHVRDISHPDTDAQAADVKDVLTELGIDVEAGGRLVEVWNKIDILPE 352
>gi|240850696|ref|YP_002972096.1| GTP-binding protein HflX [Bartonella grahamii as4aup]
gi|240267819|gb|ACS51407.1| GTP-binding protein HflX [Bartonella grahamii as4aup]
Length = 447
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 210/395 (53%), Gaps = 45/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R+ T FG G V+ + C+I+ + ++ V+ L+ +QQRNLE+ W
Sbjct: 60 VVNYETINIATPRSATLFGKGKVDALTCYID----EYSIELAIVDHFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+K RLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKGRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIIRIRRELETVIKTRALHRAKRKK---- 214
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ VVLP G+ +LLSDT
Sbjct: 215 --TSYPVVALVGYTNTGKSTLFNRLSGADVLAKNMLFATLDPTLRKVVLPHGKTILLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL + + + +
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVVEADLILHVRDMSDLDHRAHAQDVLEVLSSLDIDIDDM 332
Query: 413 KNMIEVWNKIDYHDEEMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVD 457
+++IEVWNKID DE+ + V + GD + RA +K E
Sbjct: 333 EHIIEVWNKIDMLDEQALNVLQTSAKTRLNPALMVSALKGDGLDQLLRAIEKRIFGEVQS 392
Query: 458 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 492
+E + + D F E+ E M + H+D S
Sbjct: 393 IEYL--LKPHEMSLIDWFY-ENSAEIMQEGHDDGS 424
>gi|365854975|ref|ZP_09395037.1| GTP-binding protein HflX [Acetobacteraceae bacterium AT-5844]
gi|363719638|gb|EHM02940.1| GTP-binding protein HflX [Acetobacteraceae bacterium AT-5844]
Length = 434
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 199/338 (58%), Gaps = 37/338 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + + R T G G VE K I + ++ + V+A L+ +QQRNLERAW
Sbjct: 53 IVHSAAFPLRTRRPSTLLGEGQVEAAKLEIE----EHQVGVVVVDAALTPVQQRNLERAW 108
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR GLI+EIF A T+E LQ ELA L Y+++RLVR T E
Sbjct: 109 GCKVIDRTGLILEIFGERARTREGTLQVELAHLEYQRTRLVR------SWTHLE------ 156
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GE+++++ RR I ER L ++E+VRRTR + RAAR R
Sbjct: 157 -----RQRGGFGFLGGPGESQIEIDRRLIGERIVKLKKELEQVRRTRGLHRAARTRVP-- 209
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++++ LPSGR V+LSDT
Sbjct: 210 ----FPVVALVGYTNAGKSTLFNALTGAGVYAQDQLFATLDPTMRAIKLPSGRTVILSDT 265
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG------ 406
VGFISDLP QL++AF ATLEEV AD+++HV D P+ R+ V++VL+++
Sbjct: 266 VGFISDLPTQLIEAFRATLEEVAAADIILHVRDVAHPDTASQRSDVMEVLEEMASGPNPT 325
Query: 407 VSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFS 444
+ E IEV NK D +G + + G D + +
Sbjct: 326 LDENWQGRTIEVLNKADL----LGGIAVVPGTDAAAIA 359
>gi|389877556|ref|YP_006371121.1| GTP-binding protein HFLX [Tistrella mobilis KA081020-065]
gi|388528340|gb|AFK53537.1| GTP-binding protein HFLX [Tistrella mobilis KA081020-065]
Length = 455
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/307 (42%), Positives = 183/307 (59%), Gaps = 27/307 (8%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
+ R T G G V+ IK + A +D + +N L+ IQQRNLE+AW V+DR+
Sbjct: 73 ARMRPSTLLGSGKVDEIKAKLEAAP----VDLVVMNRPLTPIQQRNLEKAWNVKVIDRIW 128
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A T+E +LQ ELA L Y++SRLVR T E R G
Sbjct: 129 LILEIFADRARTREGRLQVELARLGYQRSRLVR------SWTHLE-----------RQRG 171
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
GRGF++G GET+++ RR I ++ + L Q+ EV RTR + R RR VA
Sbjct: 172 GRGFLAGPGETQIETDRRIIDDKMARLKLQLAEVVRTRELHRKKRREVP------YPVVA 225
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPL 361
+VGYTNAGKSTL + ++ + + + LFATLDP ++++ LPSGR+V+LSDTVGF+S+LP
Sbjct: 226 LVGYTNAGKSTLFNRVTGASVMAKDMLFATLDPTMRALDLPSGRRVILSDTVGFVSELPT 285
Query: 362 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 421
L+ AF ATLEEV EA L++HV D P+ R VL VL ++G+ +++E NK
Sbjct: 286 GLIAAFRATLEEVREAALIIHVRDIADPDTGAQRRDVLHVLGELGMGHRLADDVLEFRNK 345
Query: 422 IDYHDEE 428
+D + E
Sbjct: 346 LDMLEGE 352
>gi|395791091|ref|ZP_10470549.1| GTP-binding protein HflX [Bartonella alsatica IBS 382]
gi|395408454|gb|EJF75064.1| GTP-binding protein HflX [Bartonella alsatica IBS 382]
Length = 447
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/320 (41%), Positives = 187/320 (58%), Gaps = 27/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V ++K R T FG G E + +I S+ ++ + V+ L+ +QQRNLE+ W
Sbjct: 60 IVHYETVKIVTLRPATLFGKGKAEALAHYI----SEYNIELVIVDYFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A A TKE LQ +LA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGARARTKEGILQVQLAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIICIRRELETVIKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ V+LP G+ +LLSDT
Sbjct: 219 ------VVALVGYTNTGKSTLFNRLSGADVLAKDMLFATLDPTLRKVILPHGKTILLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL +G++
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVVEADLILHVRDMSDSDHYAHAKDVLEVLSGLGININDT 332
Query: 413 KNMIEVWNKIDYHDEEMGDV 432
+++IEVWNKID DE+ +V
Sbjct: 333 EHIIEVWNKIDLLDEQTLNV 352
>gi|288958341|ref|YP_003448682.1| GTP-binding protein [Azospirillum sp. B510]
gi|288910649|dbj|BAI72138.1| GTP-binding protein [Azospirillum sp. B510]
Length = 426
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 207/358 (57%), Gaps = 48/358 (13%)
Query: 71 LKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFF 130
++PP +++L EA+ LA +++ D VV K + + T
Sbjct: 14 MRPP---ESRLEEAVGLAQAIQ-----------LD-------VVHAECAKVNRPQPSTLL 52
Query: 131 GPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAH 190
G GTVE + + +E+ + ++ LS +QQRNLER+ V+DR GLI+EIF A
Sbjct: 53 GSGTVEQLAQVVEESEAA----LVILDHALSPVQQRNLERSLKAKVIDRTGLILEIFGAR 108
Query: 191 AHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAG 250
A T+E LQ ELA+L Y+KSRLVR T E R GG GF+ G G
Sbjct: 109 ARTREGMLQVELASLTYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPG 151
Query: 251 ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGK 310
E++L+L RR I +R + ++EEVRRTR + R AR + VA+VGYTNAGK
Sbjct: 152 ESQLELDRRLIGDRIIKIKKELEEVRRTRGLHRKARAK------VPYPVVALVGYTNAGK 205
Query: 311 STLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHAT 370
STL + L+++D+F+ LFATLDP ++ V LPSGRKV+LSDTVGFISDLP LV AF AT
Sbjct: 206 STLFNRLANADVFAQDLLFATLDPTMRQVTLPSGRKVILSDTVGFISDLPHGLVAAFRAT 265
Query: 371 LEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
LEEV AD+++HV D + E + V +VL +G+ E +IEV NKID DEE
Sbjct: 266 LEEVDAADIILHVRDIAHIDSEAQKADVHEVLSDMGIDPEIDDRVIEVLNKIDALDEE 323
>gi|77463363|ref|YP_352867.1| GTP-binding protein [Rhodobacter sphaeroides 2.4.1]
gi|77387781|gb|ABA78966.1| Putative GTP-binding protein [Rhodobacter sphaeroides 2.4.1]
Length = 416
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/317 (44%), Positives = 191/317 (60%), Gaps = 29/317 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP +V ++ +A+ FG G VE +K G + + + V+ +S +QQRN
Sbjct: 33 LPDMEIVGQEVVRLPRAQPGLLFGTGKVEELKARFKGLD----VGLVLVDGPVSPVQQRN 88
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+ WG +LDR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 89 LEKEWGVKLLDRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTHLE- 141
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ + Q+++V +TR + RA+RR
Sbjct: 142 ----------RQRGGLGFVGGPGETQIEADRRAIDEQVIRIRRQLDKVVKTRELHRASRR 191
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKV 347
+ VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ V LPSGRKV
Sbjct: 192 KVP------FPIVALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKV 245
Query: 348 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 407
+LSDTVGFISDLP QLV AF ATLEEV+EADL++HV D P E V ++LQ +GV
Sbjct: 246 ILSDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGV 305
Query: 408 SEEKLKNMIEVWNKIDY 424
+ +EVWNK+D
Sbjct: 306 --KGATPQVEVWNKLDL 320
>gi|304391556|ref|ZP_07373498.1| GTP-binding protein HflX [Ahrensia sp. R2A130]
gi|303295785|gb|EFL90143.1| GTP-binding protein HflX [Ahrensia sp. R2A130]
Length = 455
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/354 (41%), Positives = 207/354 (58%), Gaps = 49/354 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA+ LA +++ + +V + S+ K +A T FG G VE +
Sbjct: 55 ARLDEAVGLARAIDLE------------------IVHSASVPLSKLKAGTLFGTGKVEEL 96
Query: 139 KCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
K I LDA + V+ L+ +QQRNLE+ W V+DR GLI+EIF A A TKE
Sbjct: 97 KGLI------AALDAGLVVVDHPLTPVQQRNLEKEWQAKVVDRTGLILEIFGARAQTKEG 150
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
+LQ ELA L Y+K RLVR + RG G G GF+ G GET+++
Sbjct: 151 RLQVELAHLNYQKGRLVR-------------SWTHLERQRGGGGGSGGFLGGPGETQIES 197
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLV 314
RR++ + + L ++E+VRRTR + R+ R+R H VA+VGYTNAGKSTL
Sbjct: 198 DRRQLQGKVNALEKELEKVRRTRTLHRSQRKRIPH--------PVVALVGYTNAGKSTLF 249
Query: 315 SALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEV 374
++L+ +++ + LFATLDP L+ + LP G + +LSDTVGF+SDLP LV AF ATLEEV
Sbjct: 250 NSLTGAEVMAKDMLFATLDPTLRQLHLPQGTQAILSDTVGFVSDLPTHLVAAFRATLEEV 309
Query: 375 VEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
+EA+L++HV D + + + V +L Q+GV E+ ++EVWNKID D E
Sbjct: 310 IEAELILHVRDISDSDTKAQAEDVYTILSQLGVGEDGHSRVVEVWNKIDLLDAE 363
>gi|395779857|ref|ZP_10460326.1| GTP-binding protein HflX [Bartonella washoensis 085-0475]
gi|395420232|gb|EJF86517.1| GTP-binding protein HflX [Bartonella washoensis 085-0475]
Length = 447
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 185/320 (57%), Gaps = 27/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R TFFG G V+ + +I S+ + V+ L+ +QQRNLE+ W
Sbjct: 60 VVYYETVNIAMLRPATFFGKGKVDALAHYI----SEYHIALAIVDHFLTPVQQRNLEKIW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIIRIRRELETVVKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ VVLP G+ VLLSDT
Sbjct: 219 ------VVALVGYTNTGKSTLFNRLSGADVLAKDMLFATLDPTLRKVVLPHGKTVLLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL +G++ +
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVVEADLILHVKDMSDLDHRAHAQDVLEVLSSLGINIDDT 332
Query: 413 KNMIEVWNKIDYHDEEMGDV 432
+++IEVWNKID DE +V
Sbjct: 333 EHIIEVWNKIDILDEHAMNV 352
>gi|423711414|ref|ZP_17685734.1| GTP-binding protein HflX [Bartonella washoensis Sb944nv]
gi|395414794|gb|EJF81232.1| GTP-binding protein HflX [Bartonella washoensis Sb944nv]
Length = 447
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 185/320 (57%), Gaps = 27/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R TFFG G V+ + +I S+ + V+ L+ +QQRNLE+ W
Sbjct: 60 VVYYETVNIAMLRPATFFGKGKVDALAHYI----SEYHIALAIVDHFLTPVQQRNLEKIW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIIRIRRELETVVKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ VVLP G+ VLLSDT
Sbjct: 219 ------VVALVGYTNTGKSTLFNRLSGADVLAKDMLFATLDPTLRKVVLPHGKTVLLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL +G++ +
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVVEADLILHVKDMSDLDHRAHAQDVLEVLSSLGINIDDT 332
Query: 413 KNMIEVWNKIDYHDEEMGDV 432
+++IEVWNKID DE +V
Sbjct: 333 EHIIEVWNKIDILDEHAMNV 352
>gi|374291860|ref|YP_005038895.1| putative GTP-binding protein (HflX-like) [Azospirillum lipoferum
4B]
gi|357423799|emb|CBS86659.1| Putative GTP-binding protein (HflX-like) [Azospirillum lipoferum
4B]
Length = 409
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 205/358 (57%), Gaps = 48/358 (13%)
Query: 71 LKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFF 130
++PP +++L EA+ LA +++ D V+ K + + T
Sbjct: 1 MRPP---ESRLEEAIGLAQAIQ-----------LD-------VIHAECAKVNRPQPSTLL 39
Query: 131 GPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAH 190
G GTVE H+ + E + ++ LS +QQRNLERA V+DR GLI+EIF A
Sbjct: 40 GSGTVE----HLAEVVEENEATLVILDHALSPVQQRNLERALKAKVIDRTGLILEIFGAR 95
Query: 191 AHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAG 250
A T+E LQ ELA+L Y+KSRLVR T E R GG GF+ G G
Sbjct: 96 ARTREGMLQVELASLTYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPG 138
Query: 251 ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGK 310
E++L+L RR I +R + ++EEVRRTR + R AR + VA+VGYTNAGK
Sbjct: 139 ESQLELDRRLIGDRIIKIKKELEEVRRTRGLHRKARAK------VPYPVVALVGYTNAGK 192
Query: 311 STLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHAT 370
STL + L+++D+F+ LFATLDP ++ V LPSGRKV+LSDTVGFISDLP LV AF AT
Sbjct: 193 STLFNRLANADVFAQNLLFATLDPTMRQVTLPSGRKVILSDTVGFISDLPHGLVAAFRAT 252
Query: 371 LEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
LEEV AD+++HV D + + + V +VL +G+ E +IEV NKID D E
Sbjct: 253 LEEVDAADIILHVRDIAHIDSDAQKADVHEVLSDMGIDPETDDRVIEVLNKIDALDGE 310
>gi|144899203|emb|CAM76067.1| GTP-binding protein, HSR1 [Magnetospirillum gryphiswaldense MSR-1]
Length = 437
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 202/350 (57%), Gaps = 45/350 (12%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
Q++L+EA+ L ++ D D EL P K R T G G VE
Sbjct: 33 QSRLDEAVGLTQAI--------DLDVVAAELVP----------VSKRRPATLIGKGAVER 74
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ + + + V+ LS +QQRNLE+ W V+DR GLI+EIF A A T+E
Sbjct: 75 LAIIVKDQD----IQVAIVDGHLSPVQQRNLEKEWACKVIDRTGLILEIFGARARTREGS 130
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELAAL Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 131 LQVELAALSYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 173
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I +R L ++EEV+RTR + R+ARRR VA+VGYTNAGKSTL + L
Sbjct: 174 RRMIGDRIVKLKRELEEVKRTRELHRSARRRVP------YPIVALVGYTNAGKSTLFNRL 227
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ S++ + LFATLDP ++ + LPSGR+++LSDTVGFISDLP +LV AF ATLEEV+EA
Sbjct: 228 TQSEVLAKDMLFATLDPTMRGLKLPSGRQIILSDTVGFISDLPHELVAAFRATLEEVLEA 287
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
D++VHV D P+ E + V VL+++G+ + + ++E NKID E
Sbjct: 288 DVVVHVRDMAHPDTEAQASDVELVLKELGLGDMVDRGLVEALNKIDLLPE 337
>gi|395793427|ref|ZP_10472829.1| GTP-binding protein HflX [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|423713896|ref|ZP_17688156.1| GTP-binding protein HflX [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395421702|gb|EJF87938.1| GTP-binding protein HflX [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395430809|gb|EJF96838.1| GTP-binding protein HflX [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 447
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 208/395 (52%), Gaps = 45/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T FG G V+ + +I S+ ++ + V+ L+ +QQRNLE+ W
Sbjct: 60 VVYYEAINIITPRPATLFGKGKVDALAHYI----SEYYVELVIVDYFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 KCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKITRIQRELETVTKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ V+LP G+ +LLSDT
Sbjct: 219 ------VVALVGYTNTGKSTLFNRLSGADVLAKDMLFATLDPTLRKVILPHGKTILLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL +G+ +
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVVEADLILHVRDMSDFDHRAHAKDVLEVLSSLGIDIDDT 332
Query: 413 KNMIEVWNKIDYHDEEMGDVEYIDG---------------DDISNFSRAEDKDTTSEPVD 457
+++IEVWNKID DE +V + D + A +K E +
Sbjct: 333 EHIIEVWNKIDILDEHALNVLHTSAKTRLNPAVMVSALMNDGLDQLLTAIEKRIFGEMQN 392
Query: 458 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 492
VEC+ + D F GE M + H D S
Sbjct: 393 VECL--LRPHEMPLIDWFYKNS-GEIMQEGHEDGS 424
>gi|310815879|ref|YP_003963843.1| GTP-binding protein HflX [Ketogulonicigenium vulgare Y25]
gi|385233393|ref|YP_005794735.1| GTP binding protein-like protein [Ketogulonicigenium vulgare
WSH-001]
gi|308754614|gb|ADO42543.1| GTP-binding protein HflX [Ketogulonicigenium vulgare Y25]
gi|343462304|gb|AEM40739.1| GTP binding protein-like protein [Ketogulonicigenium vulgare
WSH-001]
Length = 432
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 154/378 (40%), Positives = 217/378 (57%), Gaps = 50/378 (13%)
Query: 53 LFNRDPDDPPRLFLVQPRLKPPTFLQ---AKLNEALCLANSLEEQRDGYFDTDFFDKELP 109
+ N D P ++V P +K + A L+EA LA++L D E
Sbjct: 1 MLNHQQVDTPA-WIVHPEIKSDVSRREADAALDEAKALADALP-------GLDVLGAE-- 50
Query: 110 PHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLE 169
+V+ P + +G FG G V+ +K I K + ++ LS +QQRNLE
Sbjct: 51 ---IVRLPKVHAG-----MLFGSGKVQELKERITAHGVK----LVLIDGALSPVQQRNLE 98
Query: 170 RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGE 229
R WG +LDR+ LI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 99 REWGVKILDRMSLILEIFSDRARTREGVLQVEIAALSYQRTRLVRA------WTHLE--- 149
Query: 230 AEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
R GG GF+ G GET+ + RR I E+ L Q+E+V++TRA+ RAAR +
Sbjct: 150 --------RQRGGFGFVGGPGETQRENDRRAIDEQLLRLERQLEKVQKTRALHRAARAK- 200
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLL 349
VA+VGYTNAGKS+L + ++ +D+ + +LFATLDP ++ + LP G++V++
Sbjct: 201 -----VPYPIVALVGYTNAGKSSLFNRVTGADVLAKDQLFATLDPTMRRLTLPDGQEVIM 255
Query: 350 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 409
SDTVGFISDLP QLV AF ATLEEV+EADL++HV D + P + V+Q+L Q+GV E
Sbjct: 256 SDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDISHPQTAQQARDVMQILHQIGVPE 315
Query: 410 EKLKNMIEVWNKIDYHDE 427
+ M+EV NKID DE
Sbjct: 316 D--APMLEVLNKIDLLDE 331
>gi|148260756|ref|YP_001234883.1| HSR1-like GTP-binding protein [Acidiphilium cryptum JF-5]
gi|338986380|ref|ZP_08633437.1| HSR1-like GTP-binding protein [Acidiphilium sp. PM]
gi|146402437|gb|ABQ30964.1| GTP-binding protein HflX [Acidiphilium cryptum JF-5]
gi|338206695|gb|EGO94774.1| HSR1-like GTP-binding protein [Acidiphilium sp. PM]
Length = 435
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 194/337 (57%), Gaps = 32/337 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T FG G V I I ++ E+ V++ LS +QQRNLERAW V+DR GLI+
Sbjct: 59 RPATLFGEGQVRRIGESI----AEAEIGVAVVDSTLSPVQQRNLERAWKCKVIDRTGLIL 114
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
+IF A T E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 115 DIFGERARTAEGVLQVELAHLAYQRSRLVR------SWTHLE-----------RQRGGFG 157
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R + L +++EVRRTRA+ RAAR R VA+VG
Sbjct: 158 FLGGPGETQIEADRRLITDRIARLRRELDEVRRTRALHRAARNRVP------YPVVALVG 211
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL +AL+ + + + +LFATLDP ++ +VLPSGR+ +LSDTVGFISDLP +LV
Sbjct: 212 YTNAGKSTLFNALTGATVHAQDQLFATLDPTMRLIVLPSGRQAILSDTVGFISDLPTELV 271
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----VSEEKLKNMIEVWN 420
AF ATLEEV AD+++HV DC P+ R V+ VL + + E IEV N
Sbjct: 272 AAFRATLEEVAAADIILHVRDCAHPDSAAQRADVVSVLDGMARSGMIDEGWSSRCIEVMN 331
Query: 421 KIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
KID D D+ +S S E+ DT +D
Sbjct: 332 KIDLLDPAARDLPGASAIAVSALS-GENLDTLRATID 367
>gi|381169137|ref|ZP_09878311.1| putative GTP-binding protein (hflX) [Phaeospirillum molischianum
DSM 120]
gi|380681751|emb|CCG43133.1| putative GTP-binding protein (hflX) [Phaeospirillum molischianum
DSM 120]
Length = 451
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 152/351 (43%), Positives = 206/351 (58%), Gaps = 45/351 (12%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E P V P R T G G VE
Sbjct: 46 EARLAEAIGLAQAI--------DLDIVLAEAVP---VPRP-------RPATLLGKGAVER 87
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ I AE + +++ L+ +QQRNLE+AWG V+DR GLI+EIF A A T+E
Sbjct: 88 LADAIADAE----ITLAVIDSPLTPVQQRNLEKAWGCKVIDRTGLILEIFGARARTREGT 143
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELAAL Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 144 LQVELAALSYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 186
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I +R L ++++V+RTR + R ARRR VA+VGYTNAGKSTL + +
Sbjct: 187 RRMIGDRIVKLERELDDVKRTRDLHRKARRRVP------YPIVALVGYTNAGKSTLFNTI 240
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ +++ + LFATLDP ++++ LPSGRKV+LSDTVGFISDLP +LV AF ATLEEV+EA
Sbjct: 241 TRAEVMAKDMLFATLDPTMRTLDLPSGRKVILSDTVGFISDLPHELVAAFRATLEEVLEA 300
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
D++VHV D + P+ E V VL+++G+ E ++E NKID D E
Sbjct: 301 DVVVHVRDISHPDSEAQAADVEAVLRELGLEEMVDNGLVEGLNKIDLLDAE 351
>gi|326403953|ref|YP_004284035.1| GTP-binding protein HflX [Acidiphilium multivorum AIU301]
gi|325050815|dbj|BAJ81153.1| GTP-binding protein HflX [Acidiphilium multivorum AIU301]
Length = 435
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 194/337 (57%), Gaps = 32/337 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T FG G V I I ++ E+ V++ LS +QQRNLERAW V+DR GLI+
Sbjct: 59 RPATLFGEGQVRRIGESI----AEAEIGVAVVDSTLSPVQQRNLERAWKCKVIDRTGLIL 114
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
+IF A T E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 115 DIFGERARTAEGVLQVELAHLAYQRSRLVR------SWTHLE-----------RQRGGFG 157
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R + L +++EVRRTRA+ RAAR R VA+VG
Sbjct: 158 FLGGPGETQIEADRRLITDRIARLRRELDEVRRTRALHRAARNRVP------YPVVALVG 211
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL +AL+ + + + +LFATLDP ++ +VLPSGR+ +LSDTVGFISDLP +LV
Sbjct: 212 YTNAGKSTLFNALTGATVHAQDQLFATLDPTMRLIVLPSGRQAILSDTVGFISDLPTELV 271
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----VSEEKLKNMIEVWN 420
AF ATLEEV AD+++HV DC P+ R V+ VL + + E IEV N
Sbjct: 272 AAFRATLEEVAAADIILHVRDCAHPDSAAQRADVVSVLDGMARSGMIDEGWSSRCIEVMN 331
Query: 421 KIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
KID D D+ +S S E+ DT +D
Sbjct: 332 KIDLLDPAARDLPGASAIAVSALS-GENLDTLRATID 367
>gi|182678502|ref|YP_001832648.1| GTP-binding proten HflX [Beijerinckia indica subsp. indica ATCC
9039]
gi|182634385|gb|ACB95159.1| GTP-binding proten HflX [Beijerinckia indica subsp. indica ATCC
9039]
Length = 466
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 210/388 (54%), Gaps = 53/388 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
QA+ +E L LA +L D D D+ L L + + TF G G V
Sbjct: 51 QARFDEVLGLAEAL--------DLDIVDQRL----------LTLAEIKPSTFLGTGKVAE 92
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ I AE+ + + ++ LS +QQRNLE+A G V+DR GLI+EIF A T+E
Sbjct: 93 LGEAIKAAEA----ELVIMDCALSPVQQRNLEKALGAKVIDRTGLILEIFGRRARTREGS 148
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 149 LQVELAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 191
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR + ER + L + V+RTR + R RR +A+VGYTNAGKSTL + L
Sbjct: 192 RRLLQERMTRLEQDLAGVKRTRGLHRKTRR------DVPYPIIALVGYTNAGKSTLFNRL 245
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+++D+ + LFATLDP L+S+ LP G KV+LSDTVGFISDLP LV AF ATLEEV+EA
Sbjct: 246 TEADVLAQNMLFATLDPTLRSLTLPHGAKVILSDTVGFISDLPTMLVSAFRATLEEVLEA 305
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDG 437
DL++HV D + E V VL ++G+ + ++EVWNK D DEE
Sbjct: 306 DLILHVRDIAHQDAEAQCQDVESVLAELGIDMADEQRILEVWNKADLLDEEA------QA 359
Query: 438 DDISNFSRAEDKDTTSEPVDVECIDNYG 465
++N R K+ ++P+ V + G
Sbjct: 360 AALNNARRW--KNAENQPILVSALTGQG 385
>gi|49475521|ref|YP_033562.1| GTP-binding protein HflX [Bartonella henselae str. Houston-1]
gi|49238327|emb|CAF27551.1| GTP-binding protein hflX [Bartonella henselae str. Houston-1]
Length = 447
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 215/395 (54%), Gaps = 45/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T FG G V+ + +I S+ +++ + V+ L+ +QQRNLE+ W
Sbjct: 60 VVYYETVNINIPRPATLFGTGKVKALTHYI----SEYDIELVIVDHFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE------ 163
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + E+ + ++E+V +TRA+ RA R++
Sbjct: 164 -----RQRGGHGFLGGPGETQIEADRRLLQEKIIRIRRELEKVIKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTN GKSTL + LS +++ + LFATLDP L+ VVLP G+ +LLSDT
Sbjct: 219 ------IVALVGYTNTGKSTLFNRLSGANVLAKDMLFATLDPTLRKVVLPHGKTILLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS LP L+ AF ATLEEVVEADL++HV D + + H VL+VL +G+ +
Sbjct: 273 VGFISHLPTHLIAAFRATLEEVVEADLILHVRDMSDLDHRAHGQDVLEVLADLGIDIDDT 332
Query: 413 KNMIEVWNKIDYHDEEMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVD 457
+++IEVWNKID DE + V + D + A +K E
Sbjct: 333 EHIIEVWNKIDILDEHALNVLQTSARTRLNPAVMVSALMSDGLDQLLTAIEKRVFGEMQS 392
Query: 458 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 492
+EC+ + + E+ GE M + HND S
Sbjct: 393 IECLLR---PHEMSLISWFYENSGEIMQEGHNDGS 424
>gi|217976723|ref|YP_002360870.1| GTP-binding proten HflX [Methylocella silvestris BL2]
gi|217502099|gb|ACK49508.1| GTP-binding proten HflX [Methylocella silvestris BL2]
Length = 469
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 187/303 (61%), Gaps = 27/303 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R TF G G + I + AE+ +D + ++ LS IQQRNLE+A+ V+DR GLI+
Sbjct: 78 RPATFIGKGKAQEIADLVQ-AEN---IDLVIMDCALSPIQQRNLEKAFSAKVIDRTGLIL 133
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T E LQ ELA L Y+KSRLVR T E R GG G
Sbjct: 134 EIFGQRARTSEGALQVELAHLAYQKSRLVR------SWTHLE-----------RQRGGFG 176
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER + + +E+V+RTR + R +RR VA+VG
Sbjct: 177 FLGGPGETQIETDRRLIQERMTRIEQDLEKVKRTRGLHRKSRR------DVPYPVVALVG 230
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + ++ SD+F++ LFATLDP L++V L +G K++LSDTVGFISDLPL LV
Sbjct: 231 YTNAGKSTLFNRMTHSDVFAENMLFATLDPTLRAVSLGAGAKIILSDTVGFISDLPLMLV 290
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EADL++HV D + + RT V +L+ +GV + + ++EVWNK D
Sbjct: 291 SAFRATLEEVLEADLILHVRDIAHEDADAQRTDVETILRDLGVDPDDHRRILEVWNKADL 350
Query: 425 HDE 427
DE
Sbjct: 351 LDE 353
>gi|146277534|ref|YP_001167693.1| HSR1-like GTP-binding protein [Rhodobacter sphaeroides ATCC 17025]
gi|145555775|gb|ABP70388.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC
17025]
Length = 448
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/319 (44%), Positives = 190/319 (59%), Gaps = 34/319 (10%)
Query: 105 DKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQ 164
D E+ H VV+ P +A+ FG G V +K E + + V+ +S +Q
Sbjct: 67 DMEIVGHEVVRLP-----RAQPGLLFGTGKVAEMKTRFEALE----VGLVLVDGPVSPVQ 117
Query: 165 QRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTF 224
QRNLE+ WG +LDR GLI+EIF A T+E LQ ELAAL Y+++RLVR T
Sbjct: 118 QRNLEKEWGVKLLDRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTH 171
Query: 225 GETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRA 284
E R GG GF+ G GET+++ RR I E+ + Q+++V RTR + RA
Sbjct: 172 LE-----------RQRGGFGFVGGPGETQIEADRRAIDEQVIRIRRQLDKVVRTRELHRA 220
Query: 285 ARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG 344
+RR+ VA+VGYTNAGKSTL + ++ +++ + LFATLDP ++ V LPSG
Sbjct: 221 SRRKVP------FPIVALVGYTNAGKSTLFNRMTGAEVLAKDMLFATLDPTMRGVTLPSG 274
Query: 345 RKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 404
RKV+LSDTVGFISDLP QLV AF ATLEEV+EADL++HV D P E V ++LQ
Sbjct: 275 RKVILSDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQS 334
Query: 405 VGVSEEKLKNMIEVWNKID 423
+GV + EVWNK+D
Sbjct: 335 LGV--KGATPQYEVWNKLD 351
>gi|395778127|ref|ZP_10458640.1| GTP-binding protein HflX [Bartonella elizabethae Re6043vi]
gi|423715615|ref|ZP_17689839.1| GTP-binding protein HflX [Bartonella elizabethae F9251]
gi|395418436|gb|EJF84763.1| GTP-binding protein HflX [Bartonella elizabethae Re6043vi]
gi|395429742|gb|EJF95803.1| GTP-binding protein HflX [Bartonella elizabethae F9251]
Length = 447
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 183/320 (57%), Gaps = 27/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + R T FG G + + +I+ + ++ ++ L+ IQQRNLE+ W
Sbjct: 60 VVHYEIISIATPRPATLFGKGKADALANYIH----EYSIELAIIDHFLTPIQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+K RLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKGRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIIRIRRELETVIKTRALHRAKRKK---- 214
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + LS +D+ + LFATLDP L+ VVLP G+ +LLSDT
Sbjct: 215 --TSYPVVALVGYTNAGKSTLFNRLSGADVLAKNMLFATLDPTLRKVVLPHGKSILLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEV+EADL++HV D + N H VL+VL + + + L
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVIEADLIIHVRDMSDLNHRAHAQDVLEVLSSLDIDIDDL 332
Query: 413 KNMIEVWNKIDYHDEEMGDV 432
+++IEVWNKID DE+ +V
Sbjct: 333 EHIIEVWNKIDMLDEQALNV 352
>gi|296445792|ref|ZP_06887744.1| GTP-binding proten HflX [Methylosinus trichosporium OB3b]
gi|296256620|gb|EFH03695.1| GTP-binding proten HflX [Methylosinus trichosporium OB3b]
Length = 462
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 187/316 (59%), Gaps = 28/316 (8%)
Query: 114 VQNPSLKS-GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+ P L S + R TF G G VE I + AE+ + ++ LS +QQRNLE+AW
Sbjct: 60 IAEPILVSLSQVRPSTFLGKGKVEEIADAVKNAEAT----LVTMDCQLSPVQQRNLEKAW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR GLI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 GAKVIDRTGLILEIFGRRARTKEGALQVELAHLEYQKSRLVR------SWTHLE------ 163
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ER + + +E+V+RTR + R RR
Sbjct: 164 -----RQRGGFGFLGGPGETQIETDRRLIEERMARIERDLEQVKRTRGLHRKNRREVP-- 216
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + L+ + + ++ LFATLDP L+ + LP G KVLLSDT
Sbjct: 217 ----YPVVALVGYTNAGKSTLFNRLTKAGVLAEDMLFATLDPTLRQIRLPHGAKVLLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFISDLP L+ AF ATLEEV+ AD+++HV D + + E V +L ++G+S E
Sbjct: 273 VGFISDLPTMLITAFRATLEEVMLADVVLHVRDVSHEDWEAQAEDVEAILAELGLSGEAG 332
Query: 413 KNMIEVWNKIDYHDEE 428
++EVWNKID D E
Sbjct: 333 ARILEVWNKIDALDPE 348
>gi|84516232|ref|ZP_01003592.1| GTP-binding protein HflX [Loktanella vestfoldensis SKA53]
gi|84509928|gb|EAQ06385.1| GTP-binding protein HflX [Loktanella vestfoldensis SKA53]
Length = 424
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 197/311 (63%), Gaps = 34/311 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V+ P L +GK FG G +E ++ I AE++ EL + V+ ++ +QQRNLE+AW
Sbjct: 51 IVRLPKLHAGK-----LFGKGKIEELR--IIFAEAEVEL--VLVDGSVTPVQQRNLEKAW 101
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G +LDR GLI+EIF+ A T E LQ E+AAL Y+++RLVR T E
Sbjct: 102 GVKLLDRTGLILEIFSDRARTSEGVLQVEMAALSYQRTRLVRA------WTHLE------ 149
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ++ L Q+E+V +TRA+ RA+R +
Sbjct: 150 -----RQRGGLGFVGGPGETQIEADRRAIDDQLVRLRRQLEKVGKTRALHRASRAK---- 200
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ + LP+G +V++SDT
Sbjct: 201 --VPFPIVALVGYTNAGKSTLFNMLTGADVLAKDMLFATLDPTMRKITLPTGDEVIMSDT 258
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFISDLP +LV AF ATLEEV++ADL++H+ D + EE V+ +L ++GV+E
Sbjct: 259 VGFISDLPTELVAAFRATLEEVLDADLILHIRDISHDQTEEQACDVMAILHKLGVAEN-- 316
Query: 413 KNMIEVWNKID 423
+IEVWNK+D
Sbjct: 317 APLIEVWNKVD 327
>gi|359792292|ref|ZP_09295112.1| GTP-binding proten HflX [Mesorhizobium alhagi CCNWXJ12-2]
gi|359251650|gb|EHK54988.1| GTP-binding proten HflX [Mesorhizobium alhagi CCNWXJ12-2]
Length = 463
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 160/382 (41%), Positives = 213/382 (55%), Gaps = 57/382 (14%)
Query: 50 VVTLFNRDP---DDPPRLFLVQPRL-KPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFD 105
+V L +R P +D R PRL + P +A+L+EA+ LA ++ D D
Sbjct: 32 IVPLLSRSPRTDEDTGR-----PRLNRSP---EARLDEAVGLAQAI--------DLDIVH 75
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
K + V + +P R T FG G VE I I G + + V+ L+ +QQ
Sbjct: 76 KAI---VTLNDP-------RPSTLFGSGKVEEIAQVIK----DGHAELLIVDHPLTPVQQ 121
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+A VLDR GLI+EIF A TKE LQ +LA L Y+K RLVR T
Sbjct: 122 RNLEKATEAKVLDRTGLILEIFGERARTKEGTLQVDLAHLNYQKGRLVR------SWTHL 175
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR + E+ + L ++E VRRTR + RA
Sbjct: 176 E-----------RQRGGAGFLGGPGETQIESDRRALQEKITKLKRELETVRRTRDLHRAK 224
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGR 345
R++ VA+VGYTNAGKSTL + L+ + + ++ LFATLDP L+ V LP G
Sbjct: 225 RKKVP------FPVVAIVGYTNAGKSTLFNRLTGAGVLAEDMLFATLDPTLRRVRLPHGT 278
Query: 346 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 405
V+LSDTVGFISDLP L+ AF ATLEEVVEADL++H+ D + P+ V ++L +
Sbjct: 279 PVILSDTVGFISDLPTHLIAAFRATLEEVVEADLIIHLRDISDPDTAAQAEDVERILVDL 338
Query: 406 GVSEEKLKNMIEVWNKIDYHDE 427
GV K +IEVWNKID DE
Sbjct: 339 GVDASDEKRIIEVWNKIDRLDE 360
>gi|395781606|ref|ZP_10462024.1| GTP-binding protein HflX [Bartonella rattimassiliensis 15908]
gi|395421039|gb|EJF87297.1| GTP-binding protein HflX [Bartonella rattimassiliensis 15908]
Length = 445
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/320 (41%), Positives = 187/320 (58%), Gaps = 27/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ K R+ T FG G V+ + +I+ + ++ + V+ +L+ IQQRNLE+ W
Sbjct: 60 VVSYETINIVKLRSATLFGKGRVDALAHYID----EYSIELVIVDHLLTPIQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVQLAHLSYQKGRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIVRIRRELETVIKTRALHRAKRKK---- 214
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ VVLP G+ VLLSDT
Sbjct: 215 --TSYPVVALVGYTNTGKSTLFNRLSGADILAKNMLFATLDPILRKVVLPHGKTVLLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL + + +
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVVEADLILHVRDMSDLDHRAHAQDVLEVLSSLDIDVDDT 332
Query: 413 KNMIEVWNKIDYHDEEMGDV 432
+++IEVWNKID DE+ +V
Sbjct: 333 EHIIEVWNKIDTVDEQALNV 352
>gi|367476723|ref|ZP_09476098.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 285]
gi|365270919|emb|CCD88566.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 285]
Length = 458
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 141/306 (46%), Positives = 189/306 (61%), Gaps = 27/306 (8%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
G+ R T+ G G V+ I I G + + + ++ LS IQQRNLE+AW VLDR G
Sbjct: 76 GQIRPATYLGKGKVDEIAGVIAGQGA----ELVVMDCALSPIQQRNLEKAWNTKVLDRTG 131
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A TKE LQ ELA L Y++SRLVR T E R G
Sbjct: 132 LILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRG 174
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R VA
Sbjct: 175 GFGFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQRVP------YRVVA 228
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPL 361
+VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP
Sbjct: 229 LVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPT 288
Query: 362 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 421
QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E ++IEVWNK
Sbjct: 289 QLVAAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLSQLGIDPEATDSIIEVWNK 348
Query: 422 IDYHDE 427
ID DE
Sbjct: 349 IDRLDE 354
>gi|190891663|ref|YP_001978205.1| GTP-binding protein [Rhizobium etli CIAT 652]
gi|190696942|gb|ACE91027.1| GTP-binding protein [Rhizobium etli CIAT 652]
Length = 441
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 233/434 (53%), Gaps = 78/434 (17%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGQVVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +G+ + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLD----EGDSGLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRLLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD--- 431
EADL++HV D + P+ + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAGKRLIEVWNKIDRLESEVHDAMV 340
Query: 432 -----------VEYIDG-------DDIS-NFSRAEDKDTTSEPVDVECIDNYGGDDA--- 469
V + G D+IS S + T PVD + + D A
Sbjct: 341 QKAAGASNVVAVSAVSGEGVDTLMDEISRRLSGVMTETTIRLPVDKLALLPWLYDHAIVD 400
Query: 470 ---DNNDGFVSEDL 480
DN DG ++ DL
Sbjct: 401 GREDNEDGSITLDL 414
>gi|254504147|ref|ZP_05116298.1| GTP-binding proten HflX [Labrenzia alexandrii DFL-11]
gi|222440218|gb|EEE46897.1| GTP-binding proten HflX [Labrenzia alexandrii DFL-11]
Length = 431
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 190/316 (60%), Gaps = 27/316 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + ++ + T FG G V + G + +LD + ++ LS +QQRNLER
Sbjct: 42 IVHSGVVRINNPKPATLFGEGKV----AELAGIVASEDLDLVVIDHPLSPVQQRNLERRL 97
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE KLQ +LA L ++KSRLVR T E
Sbjct: 98 KTKVIDRTGLILEIFGDRARTKEGKLQVDLAHLTWQKSRLVR------SWTHLE------ 145
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR+I ER L Q+E VRRTR + R R++
Sbjct: 146 -----RQRGGAGFMGGPGETQIEADRRQIQERIIALQKQLESVRRTRELHRKKRKKIPQP 200
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + L++S++F+ LFATLDP L+ + LP GR+++LSDT
Sbjct: 201 ------VVALVGYTNAGKSTLFNRLTESEVFAKDLLFATLDPTLRKITLPHGREIILSDT 254
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFISDLP LV AF ATLEEV+EADL++HV D + + + V + L+++GV
Sbjct: 255 VGFISDLPTHLVAAFRATLEEVLEADLILHVRDISHADTDAQAEDVQKTLEELGVDALTG 314
Query: 413 KNMIEVWNKIDYHDEE 428
+IEVWNKID D++
Sbjct: 315 APIIEVWNKIDLLDKD 330
>gi|209549232|ref|YP_002281149.1| GTP-binding proten HflX [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534988|gb|ACI54923.1| GTP-binding proten HflX [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 441
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 205/357 (57%), Gaps = 50/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVTGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK +N +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLNERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 431
EADL++HV D + P+ + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAAKRLIEVWNKIDRLEPEVHD 337
>gi|146340795|ref|YP_001205843.1| GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 278]
gi|146193601|emb|CAL77618.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 278]
Length = 459
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 140/306 (45%), Positives = 188/306 (61%), Gaps = 27/306 (8%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
G+ R T+ G G V+ I G + E + + ++ LS IQQRNLE+AW VLDR G
Sbjct: 77 GQIRPATYLGKGKVD----EIAGVIASQEAELVVMDCALSPIQQRNLEKAWNTKVLDRTG 132
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A TKE LQ ELA L Y++SRLVR T E R G
Sbjct: 133 LILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRG 175
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R VA
Sbjct: 176 GFGFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQRVP------YRVVA 229
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPL 361
+VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP
Sbjct: 230 LVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPT 289
Query: 362 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 421
QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E +IEVWNK
Sbjct: 290 QLVAAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLSQLGIDPEATDTIIEVWNK 349
Query: 422 IDYHDE 427
ID D+
Sbjct: 350 IDRLDD 355
>gi|126736284|ref|ZP_01752026.1| GTP-binding protein HflX [Roseobacter sp. CCS2]
gi|126714105|gb|EBA10974.1| GTP-binding protein HflX [Roseobacter sp. CCS2]
Length = 412
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 191/311 (61%), Gaps = 34/311 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V+ P + GK FG G + +K + AE ++ + ++ ++ +QQRNLE+ W
Sbjct: 39 IVRLPRIHPGK-----LFGKGKIAELKQVFHDAE----VELVLIDGPVTPVQQRNLEKEW 89
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G +LDR GLI+EIF+ A T E LQ E+AAL Y+++RLVR
Sbjct: 90 GVKLLDRTGLILEIFSDRARTSEGVLQVEMAALSYQRTRLVRAW---------------- 133
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+ R GG GF+ G GET+++ RR I E+ + L Q+ +V +TR + RA+R +
Sbjct: 134 -THLERQRGGLGFVGGPGETQIEADRRAIDEQLNRLRKQLAKVVKTRELHRASRAK---- 188
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + L+ + +F+ LFATLDP ++ +VLP+G +V++SDT
Sbjct: 189 --VPFPIVALVGYTNAGKSTLFNRLTGAQVFAKDMLFATLDPTMRKIVLPTGDEVIMSDT 246
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFISDLP +LV AF ATLEEV++ADL+VHV D + P EE V +LQ +GV+EE
Sbjct: 247 VGFISDLPTELVAAFRATLEEVLDADLIVHVRDISHPQTEEQAEDVHAILQSLGVAEE-- 304
Query: 413 KNMIEVWNKID 423
+IEVWNK D
Sbjct: 305 APIIEVWNKTD 315
>gi|395767148|ref|ZP_10447683.1| GTP-binding protein HflX [Bartonella doshiae NCTC 12862]
gi|395414461|gb|EJF80903.1| GTP-binding protein HflX [Bartonella doshiae NCTC 12862]
Length = 447
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 208/395 (52%), Gaps = 45/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T FG G V+ + +IN + ++ V+ L+ +QQRNLE+ W
Sbjct: 60 VVHYEAINISAPRPATLFGKGKVDALANYIN----EYHIELAIVDHFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++ V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIVRIRRELATVVKTRALHRAKRKK---- 214
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + LS +D + LFATLDP L+ VVLP G+ +LLSDT
Sbjct: 215 --SSYPVVALVGYTNAGKSTLFNRLSGADGLAKDMLFATLDPTLRKVVLPHGKAILLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEV+EADL++HV D + + H VL+VL +G+ +
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVIEADLILHVRDMSDFDHRAHGQDVLEVLSSLGIDIDDA 332
Query: 413 KNMIEVWNKIDYHDEEMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVD 457
+++IEVWNKID DE + + V + G+ +S +K E
Sbjct: 333 EHIIEVWNKIDLLDEHVLNALQINAKTRLNSTVMVSALTGEGLSQLLTVIEKRIFGEMQS 392
Query: 458 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 492
+ C+ + D F E+ GE + + H+D S
Sbjct: 393 IACL--LSPHEMPLIDWF-YENAGEIVQEGHDDGS 424
>gi|395787708|ref|ZP_10467300.1| GTP-binding protein HflX [Bartonella birtlesii LL-WM9]
gi|395410330|gb|EJF76885.1| GTP-binding protein HflX [Bartonella birtlesii LL-WM9]
Length = 447
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 207/395 (52%), Gaps = 45/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + ++ K R T FG G V+ + +IN K + V+ L+ IQQRNLE+ W
Sbjct: 60 IVHHEAVNIVKLRPATLFGKGKVDALAYYINEYHIK----LVIVDYFLTPIQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGERARTKEGILQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ +R + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADKRLLQEKIVRIRRELETVIKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ V LP G+ +LLSDT
Sbjct: 219 ------VVALVGYTNTGKSTLFNRLSGADVLAKDMLFATLDPTLRKVALPHGKTILLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEV+EADL++HV D + + H VL+VL + +
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVIEADLILHVRDMSDFSHHAHAQDVLKVLSGLDIDINDT 332
Query: 413 KNMIEVWNKIDYHDEEMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVD 457
+++IEVWNKID DE+ + V + + + A +K E
Sbjct: 333 EHIIEVWNKIDLLDEQALNVLQTSAKTRLNPAIMVSALMNEGLDQLLIAIEKRIFGEMQK 392
Query: 458 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 492
VEC+ + D F E+ G+ + K HND S
Sbjct: 393 VECL--LRPHEMSLIDWF-YENSGKIIQKGHNDGS 424
>gi|365883797|ref|ZP_09422909.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 375]
gi|365287676|emb|CCD95440.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 375]
Length = 459
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 145/315 (46%), Positives = 193/315 (61%), Gaps = 27/315 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV++ G+ R T+ G G V+ I I A EL + ++ LS IQQRNLE+AW
Sbjct: 68 VVESILALIGQIRPATYLGKGKVDEIAGVI--ASQGAEL--VVMDCALSPIQQRNLEKAW 123
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDR GLI+EIF A TKE LQ ELA L Y++SRLVR T E
Sbjct: 124 NTKVLDRTGLILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE------ 171
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R
Sbjct: 172 -----RQRGGFGFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQRVP-- 224
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDT
Sbjct: 225 ----YRAVALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAISLPHGGKAMLSDT 280
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E
Sbjct: 281 VGFISNLPTQLVAAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLSQLGIDPEAT 340
Query: 413 KNMIEVWNKIDYHDE 427
++IEVWNKID DE
Sbjct: 341 DSIIEVWNKIDRLDE 355
>gi|255263172|ref|ZP_05342514.1| GTP-binding protein HflX [Thalassiobium sp. R2A62]
gi|255105507|gb|EET48181.1| GTP-binding protein HflX [Thalassiobium sp. R2A62]
Length = 452
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/318 (41%), Positives = 199/318 (62%), Gaps = 29/318 (9%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
+ LP VV + ++ KA FG G + +K ++ AE +D + ++ ++ +QQ
Sbjct: 43 RALPNLVVQGDEVVRLPKAHPGMLFGSGKIAEVKERLHDAE----VDLVLIDGPVTPVQQ 98
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+ WG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 99 RNLEKEWGVKLLDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHL 152
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I ++ L Q+ +V +TRA+ R+A
Sbjct: 153 E-----------RQRGGLGFVGGPGETQIEADRRAIDDQLVRLRKQLGKVEKTRALHRSA 201
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGR 345
R + VA+VGYTNAGKSTL + L+ +++F+ LFATLDP ++ V LP+G
Sbjct: 202 RAKVP------FPIVALVGYTNAGKSTLFNRLTGAEVFAKDMLFATLDPTMRKVDLPTGD 255
Query: 346 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 405
+++LSDTVGFISDLP +LV +F ATLEEV++ADL++HV D ++ + E V+++L ++
Sbjct: 256 EIILSDTVGFISDLPTELVASFRATLEEVLDADLILHVRDISSADTHEQSRDVMEILTKL 315
Query: 406 GVSEEKLKNMIEVWNKID 423
GV ++ ++EVWNKID
Sbjct: 316 GVGQD--APLLEVWNKID 331
>gi|114775684|ref|ZP_01451252.1| GTPase [Mariprofundus ferrooxydans PV-1]
gi|114553795|gb|EAU56176.1| GTPase [Mariprofundus ferrooxydans PV-1]
Length = 433
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 27/311 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + L KA A T G G VE I + E+ D +FV+ LS +QQRNLE AW
Sbjct: 49 IVASQRLSVRKAAAATLLGQGQVEEIARQVEILEA----DVVFVDHPLSPVQQRNLETAW 104
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A T+E LQ ELA+L Y+ RLVR T E
Sbjct: 105 NAKVVDRTGLILEIFAARARTREGVLQVELASLNYQLGRLVR------SWTHLE------ 152
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GE +++L RR I L + +V+R RA QR+ R+R
Sbjct: 153 -----RQRGGFGFMGGPGERQIELDRRMIRNSIGALERDLAKVKRMRATQRSGRQR---- 203
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+ + TVA+VGYTNAGKSTL + L+ SD+F +LFATLDP L+ + LP G +++LSDT
Sbjct: 204 --KDIPTVALVGYTNAGKSTLFNRLTTSDVFVANQLFATLDPTLRLLELPGGLRLMLSDT 261
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+ +LP +LVDAF ATLEEV+EADL++HV D + P EH V LQQ+GV +
Sbjct: 262 VGFVQELPHELVDAFRATLEEVIEADLILHVRDASDPMQAEHAKVVHDTLQQLGVVGDGA 321
Query: 413 KNMIEVWNKID 423
++E+ NK D
Sbjct: 322 PQVVEILNKKD 332
>gi|372281079|ref|ZP_09517115.1| small GTP-binding protein [Oceanicola sp. S124]
Length = 424
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/371 (40%), Positives = 214/371 (57%), Gaps = 49/371 (13%)
Query: 61 PPRLFLVQPRLKPPTFLQA---KLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R F++ P K A L EA+ LA++L P VV +
Sbjct: 8 PTRAFVIHPEFKGEEARHAPLYALAEAVSLAHAL-----------------PGLEVVGDQ 50
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
++ + T FG G VE +K + AE++ EL + ++ +S QQ+NLE+AW +L
Sbjct: 51 LVRISTVQPKTLFGKGKVEELKQTL--AEAEAEL--VLIDGPVSPKQQQNLEKAWNVKIL 106
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF+ A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 107 DRTGLILEIFSDRARTREGVLQVELAALGYQRTRLVRA------WTHLE----------- 149
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RA+R +
Sbjct: 150 RQRGGLGFVGGPGETQIEADRRAIDEQMVRLRRQLDKVVKTRELHRASRAK------VPF 203
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
VA+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ V L +G +++LSDTVGFIS
Sbjct: 204 PIVALVGYTNAGKSTLFNLLTGADVLAKDMLFATLDPTMRRVKLETGAEIILSDTVGFIS 263
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
DLP QLV AF ATLEEV+EADL++HV D + P E + V ++L ++G+ EE ++E
Sbjct: 264 DLPHQLVAAFRATLEEVLEADLVLHVRDISHPETREQKADVEEILAELGLREE--VPVLE 321
Query: 418 VWNKIDYHDEE 428
VWNKID EE
Sbjct: 322 VWNKIDLLPEE 332
>gi|456355449|dbj|BAM89894.1| putative GTP-binding protein, HflX [Agromonas oligotrophica S58]
Length = 413
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 186/303 (61%), Gaps = 27/303 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G V+ I G + ++ + ++ LS IQQRNLE+AW VLDR GLI+
Sbjct: 34 RPATYLGKGKVD----EIGGVIASHGVELVVMDCALSPIQQRNLEKAWNTKVLDRTGLIL 89
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y++SRLVR T E R GG G
Sbjct: 90 EIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 132
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R + L ++I++V+ TR + RA R+R VA+VG
Sbjct: 133 FMGGPGETQIEADRRLIGDRITRLENEIKKVQATRRLHRAGRQR------VPYRVVALVG 186
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP QLV
Sbjct: 187 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAIALPHGGKAMLSDTVGFISNLPTQLV 246
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E +IEVWNKID
Sbjct: 247 AAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLSQLGIDPEATDTIIEVWNKIDR 306
Query: 425 HDE 427
DE
Sbjct: 307 LDE 309
>gi|154253563|ref|YP_001414387.1| GTP-binding protein HSR1-like [Parvibaculum lavamentivorans DS-1]
gi|154157513|gb|ABS64730.1| GTP-binding protein HSR1-related [Parvibaculum lavamentivorans
DS-1]
Length = 474
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 216/393 (54%), Gaps = 61/393 (15%)
Query: 54 FNRDPDDPPRLFLVQPRLKPPTFLQAK-----------LNEALCLANSLEEQRDGYFDTD 102
F P + R F+V P LK QAK L+EA+ LA ++
Sbjct: 18 FRVKPAELTRAFVVVPWLKS-VAKQAKRGGGGRSPESRLDEAVGLAAAISLN-------- 68
Query: 103 FFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSG 162
VV + + R T FG G V+ IK I AE + +D + V+ L
Sbjct: 69 ----------VVGSVVVPLASPRPATLFGEGKVDEIKGQI--AELR--VDLVIVDGALGP 114
Query: 163 IQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRL 222
QQRNLE+AW VLDR GLI+EIF A T+E LQ ELA L Y+KSRLVR
Sbjct: 115 GQQRNLEKAWNVKVLDRTGLILEIFGERARTREGSLQVELAHLNYQKSRLVR------SW 168
Query: 223 TFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQ 282
T E R GG GF+ G GET+++ RR I ER + + Q+E V+RTR +
Sbjct: 169 THLE-----------RQRGGFGFLGGPGETQIEADRRLIQERIAKIEHQLETVKRTRELH 217
Query: 283 RAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP 342
R RR VA+VGYTNAGKSTL + L+++ +F++ LFATLDP ++++VLP
Sbjct: 218 RKKRREAP------YPIVALVGYTNAGKSTLFNRLTEAGVFAENLLFATLDPTMRALVLP 271
Query: 343 SGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVL 402
SGRK++LSDTVGFISDLP LV AF ATLEEV+EA++++HV D +T V +VL
Sbjct: 272 SGRKIILSDTVGFISDLPTHLVAAFRATLEEVLEAEVILHVRDAAHEETAIQKTDVEKVL 331
Query: 403 QQVGVSEEKL----KNMIEVWNKIDYHDEEMGD 431
+GV+ E +++++V NKID + E D
Sbjct: 332 TSLGVTRESTAANGQHVVDVLNKIDLLEGEFRD 364
>gi|451942080|ref|YP_007462717.1| GTP-binding protein HflX [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
gi|451901467|gb|AGF75929.1| GTP-binding protein HflX [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
Length = 447
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 213/395 (53%), Gaps = 45/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T FG G V+++ +I S+ ++ + V+ L+ +QQRNLE+ W
Sbjct: 60 VVYYEAINITTLRPATLFGKGKVDSLAHYI----SEYYVELVVVDYFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 KCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE------ 163
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + + + + ++E V +TRA+ RA R++
Sbjct: 164 -----RQRGGHGFLGGPGETQVEADRRLLQGKITRIRRELETVTKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ V+LP G+ +LL DT
Sbjct: 219 ------VVALVGYTNTGKSTLFNRLSGADVLAKDMLFATLDPALRKVILPHGKTILLFDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL +G+ +
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVVEADLILHVRDMSDFDHRAHAKDVLEVLSSLGIDIDDT 332
Query: 413 KNMIEVWNKIDYHDEEMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVD 457
+++IEVWNKID DE + V + D + A +K E +
Sbjct: 333 EHIIEVWNKIDILDEHALNVLQTSTKTRLNPAVMVSALMSDGLDQLLTAIEKRIFGEMQN 392
Query: 458 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 492
VEC+ + D F GE M + H D S
Sbjct: 393 VECL--LKPHEMPLIDWFYKNS-GEIMQEGHEDGS 424
>gi|75675642|ref|YP_318063.1| HSR1-like GTP-binding protein [Nitrobacter winogradskyi Nb-255]
gi|74420512|gb|ABA04711.1| GTP-binding protein HflX [Nitrobacter winogradskyi Nb-255]
Length = 442
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 190/314 (60%), Gaps = 27/314 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V+Q + R T+ G G VE ++ I A+ G + ++ LS IQQRNLE+AW
Sbjct: 51 VIQAIVAPVSQIRPATYLGKGKVEELQGLI-AADGAG---LVVMDCALSPIQQRNLEKAW 106
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDR GLI+EIF A TKE LQ ELA L Y++SRLVR T E
Sbjct: 107 STKVLDRTGLILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE------ 154
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R
Sbjct: 155 -----RQRGGFGFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQRVP-- 207
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + L+ +D+ + LFATLDP L+S+ LP G K +LSDT
Sbjct: 208 ----YRVVALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRSLALPHGGKAMLSDT 263
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ +
Sbjct: 264 VGFISNLPTQLVAAFRATLEEVMEADVILHVRDISHEDTEPQQHDVEAVLHQLGIDPDGP 323
Query: 413 KNMIEVWNKIDYHD 426
MIEVWNKID D
Sbjct: 324 ARMIEVWNKIDRFD 337
>gi|319898998|ref|YP_004159091.1| GTP-binding protein HflX [Bartonella clarridgeiae 73]
gi|319402962|emb|CBI76513.1| GTP-binding protein HflX [Bartonella clarridgeiae 73]
Length = 444
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 183/303 (60%), Gaps = 27/303 (8%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
+ T F G V +I S+ + V+ L+ +QQRNLE+ W V+DR LI+E
Sbjct: 74 SSTLFRIGKVNKFAHYI----SEHHITLAIVDHFLTPVQQRNLEKLWNCKVIDRTALILE 129
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A TKE LQ ELA L Y+KSRLVR T E R GG GF
Sbjct: 130 IFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE-----------RQRGGSGF 172
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+++ RR + + + ++E V +TRA+ RA R++ +A+VGY
Sbjct: 173 LGGPGETQIEADRRLLQNKIIRIRRELETVVKTRALHRAKRKK------IPYPVIALVGY 226
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + LSDS++ ++ LFATLDP L+ +VLP G+KVLLSDTVGFIS+LP L+
Sbjct: 227 TNAGKSTLFNHLSDSNVLAEDMLFATLDPTLRKIVLPHGQKVLLSDTVGFISNLPTHLIA 286
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATLEEV+EADL++HV D + P+ H VL++L +GV + +++E+WNKID
Sbjct: 287 AFRATLEEVIEADLILHVRDVSDPDHYAHAQDVLKILSSLGVDINDMDHIVEIWNKIDVL 346
Query: 426 DEE 428
D+
Sbjct: 347 DQH 349
>gi|395784503|ref|ZP_10464341.1| GTP-binding protein HflX [Bartonella melophagi K-2C]
gi|395423753|gb|EJF89947.1| GTP-binding protein HflX [Bartonella melophagi K-2C]
Length = 446
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 203/356 (57%), Gaps = 45/356 (12%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVE 136
+ +++ EAL LA+++E Y + PH PS T FG G V
Sbjct: 42 IDSRIKEALGLAHAIELDIIHYETVNIS----TPH-----PS---------TLFGVGKVG 83
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
+I S+ + V+ +L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 84 AFADYI----SENHIALAVVDHVLTPVQQRNLEKLWSCKVIDRTGLILEIFGRRARTKEG 139
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ ELA L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 140 KLQVELAHLSYQKSRLVR------SWTHLE-----------RQRGGSGFLGGPGETQIES 182
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR + ++ + + +++ V +TRA+ RA R++ VA+VGYTNAGKSTL +
Sbjct: 183 DRRLLQDKITRIRRELKNVVKTRALHRAKRKKTSH------PVVALVGYTNAGKSTLFNR 236
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVE 376
LSD+ + + LFATLDP L+ V+LP G+ + LSDTVGFIS+LP L+ AF ATLEEV+E
Sbjct: 237 LSDAGVLTKDMLFATLDPTLRKVILPHGQTIFLSDTVGFISNLPTHLIAAFKATLEEVIE 296
Query: 377 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDV 432
ADL++HV D + P+ VL++L +GV+ +++EVWNK D DE +V
Sbjct: 297 ADLIIHVKDISDPDHRAQAQDVLEILSSLGVNIGNTDHIVEVWNKADMLDEHTLNV 352
>gi|304321928|ref|YP_003855571.1| GTP-binding protein HFLX [Parvularcula bermudensis HTCC2503]
gi|303300830|gb|ADM10429.1| GTP-binding protein HFLX [Parvularcula bermudensis HTCC2503]
Length = 469
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/389 (39%), Positives = 215/389 (55%), Gaps = 37/389 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+FG G V+ I I+ A+ L + VN L+ +Q RNLERAW VLDR LI+
Sbjct: 64 RPATYFGTGKVKEIGELIDNADPSPGL--VVVNTQLTPVQHRNLERAWQAKVLDRTALIL 121
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE +LQ +LA L Y++SRLVR T E R GG G
Sbjct: 122 EIFGERAQTKEGRLQVDLAHLTYQRSRLVR------SWTHLE-----------RQRGGAG 164
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GE +++ RR + + L +Q+E+VRRTR +QRA R+R +A+VG
Sbjct: 165 FLGGPGERQIEADRRVLAGKIDRLKAQLEQVRRTRTLQRAKRKRAPHP------VIALVG 218
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKS+L + ++ + + + LFATLDP +++V LP + +LSDTVGFISDLP LV
Sbjct: 219 YTNAGKSSLFNRMTGAGVTAQDLLFATLDPTMRAVDLPGVGRAILSDTVGFISDLPTDLV 278
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EAD+L+HV D + E R VL VL ++G+ E+ + +IEVWNKID
Sbjct: 279 AAFRATLEEVLEADILLHVRDISHSEHEAQRLDVLSVLGELGIDEDSPQQVIEVWNKIDL 338
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESM 484
+ + S F+ A T P+ V + + G+ + G + L +
Sbjct: 339 LSPDDQHTAVLTAAHRSTFAEA----TLLSPL-VSAVSAHSGEGLEGLFGAIDHLLTQDY 393
Query: 485 NKNH------NDYSDGWLLS-GDEQDNVE 506
H + +D WL + GD ++ VE
Sbjct: 394 TLFHVRLGPADGAADAWLHAHGDIREIVE 422
>gi|417103023|ref|ZP_11960943.1| GTP-binding protein [Rhizobium etli CNPAF512]
gi|327191435|gb|EGE58458.1| GTP-binding protein [Rhizobium etli CNPAF512]
Length = 441
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 232/434 (53%), Gaps = 78/434 (17%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGQVVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRLLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD--- 431
EADL++HV D + P+ + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAGKRLIEVWNKIDRLEPEVHDAMV 340
Query: 432 -----------VEYIDG-------DDIS-NFSRAEDKDTTSEPVDVECIDNYGGDDA--- 469
V + G D+IS S + T PVD + + D A
Sbjct: 341 QKAAGASNVVAVSAVSGEGVDTLMDEISRRLSGVMTETTIRLPVDKLALLPWLYDHAIVD 400
Query: 470 ---DNNDGFVSEDL 480
DN DG ++ DL
Sbjct: 401 GREDNEDGSITLDL 414
>gi|86749994|ref|YP_486490.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris HaA2]
gi|86573022|gb|ABD07579.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris HaA2]
Length = 457
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 203/350 (58%), Gaps = 46/350 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA LA ++ D + + L P + R T+ G G VE I
Sbjct: 51 ARLDEAAGLARAI--------DLEIAEAVLTP----------ISQIRPATYLGKGKVEEI 92
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
I G E+ D + ++ LS IQQRNLE+AW VLDR GLI+EIF A TKE L
Sbjct: 93 LGIIKGHEA----DLVVMDCALSPIQQRNLEKAWSAKVLDRTGLILEIFGRRAKTKEGAL 148
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y++SRLVR T E R GG GF+ G GET+++ R
Sbjct: 149 QVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEADR 191
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I +R S L +++++V+ TR + RA R+R VA+VGYTNAGKSTL + L+
Sbjct: 192 RLIGDRISRLENELKKVQATRRLHRAGRQRVP------YRVVALVGYTNAGKSTLFNRLT 245
Query: 319 DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 378
+D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP QLV AF ATLEEV+EAD
Sbjct: 246 RADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEAD 305
Query: 379 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
L++HV D + + E V VL+Q+GV E ++E+WNKID + E
Sbjct: 306 LILHVRDISHEDAEAQERDVDAVLRQLGV-EADGGRILEIWNKIDRFEPE 354
>gi|319408442|emb|CBI82097.1| GTP-binding protein HflX [Bartonella schoenbuchensis R1]
Length = 453
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 186/320 (58%), Gaps = 27/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V ++ T FG G V+ +I S+ + ++ +L+ +QQRNLE+ W
Sbjct: 60 IVHYETINISTPHPSTLFGVGKVDAFADYI----SEHHIALAIIDHVLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE KLQ ELA L Y+KSRLVR T E
Sbjct: 116 SCKVIDRTALILEIFGRRARTKEGKLQVELAHLSYQKSRLVR------SWTHLE------ 163
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + ++ + + ++E V +TRA+ RA R++
Sbjct: 164 -----RQRGGSGFLGGPGETQIETDRRLLQDKITRIRRELENVVKTRALHRAKRKKTSH- 217
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + LSD+ + + LFATLDP L+ V+LP G+ + LSDT
Sbjct: 218 -----PVVALVGYTNAGKSTLFNRLSDAGVLTKDMLFATLDPTLRKVILPHGQTIFLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEV+EADL++HV D + P+ VL++L +GV
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVIEADLIIHVKDISDPDHRAQAQDVLEILSSLGVDIGNT 332
Query: 413 KNMIEVWNKIDYHDEEMGDV 432
++EVWNK D DE +V
Sbjct: 333 DRIVEVWNKADMLDEHTLNV 352
>gi|85715518|ref|ZP_01046499.1| GTP-binding protein, [Nitrobacter sp. Nb-311A]
gi|85697713|gb|EAQ35589.1| GTP-binding protein, [Nitrobacter sp. Nb-311A]
Length = 457
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 190/316 (60%), Gaps = 31/316 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLER 170
VVQ + R T+ G G VE +K I +GA + ++ LS +QQRNLE+
Sbjct: 66 VVQAIVAPVSQIRPATYLGKGKVEELKGLIAADGA------SLVVMDCTLSPVQQRNLEK 119
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
AWG VLDR GLI+EIF A TKE LQ ELA L Y++SRLVR T E
Sbjct: 120 AWGTKVLDRTGLILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE---- 169
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
R GG GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R
Sbjct: 170 -------RQRGGFGFMGGPGETQIEADRRLIGDRIARLENELKKVQATRRLHRAGRQRVP 222
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
VA+VGYTNAGKSTL + L+ +D+ + LFATLDP L+S+ LP G K +LS
Sbjct: 223 ------YRVVALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRSLALPHGGKAMLS 276
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGFIS+LP QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+
Sbjct: 277 DTVGFISNLPTQLVAAFRATLEEVMEADIILHVRDISHEDTEPQQHDVEAVLHQLGIERG 336
Query: 411 KLKNMIEVWNKIDYHD 426
++EVWNKID D
Sbjct: 337 GAARILEVWNKIDRFD 352
>gi|118589883|ref|ZP_01547287.1| GTP binding protein-like [Stappia aggregata IAM 12614]
gi|118437380|gb|EAV44017.1| GTP binding protein-like [Stappia aggregata IAM 12614]
Length = 426
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/299 (45%), Positives = 182/299 (60%), Gaps = 27/299 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V + G + +LD + ++ L+ +QQRNLER V+DR GLI+EIF
Sbjct: 57 TLFGDGKV----AELAGIVASEDLDLVVIDHPLTPVQQRNLERRLKTKVIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKE +LQ +LA L ++KSRLVR T E R GG GF+
Sbjct: 113 GDRARTKEGRLQVDLAHLTWQKSRLVR------SWTHLE-----------RQRGGAGFMG 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR+I +R L Q+E+VRRTR + R R++ VA+VGYTN
Sbjct: 156 GPGETQIEADRRQIQDRIIALQKQLEQVRRTRDLHRKKRKKIPQP------VVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + +++SD+F+ LFATLDP L+ V LP G++++LSDTVGFISDLP LV AF
Sbjct: 210 AGKSTLFNRMTESDVFAKDLLFATLDPTLRKVALPHGKEIILSDTVGFISDLPTHLVAAF 269
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
ATLEEV+EADL++HV D + P+ E V + L +GV +IEVWNKID D
Sbjct: 270 RATLEEVLEADLILHVRDISHPDTEAQAEDVKKTLTDLGVDALTGAPIIEVWNKIDCLD 328
>gi|338974519|ref|ZP_08629877.1| GTP-binding protein HflX [Bradyrhizobiaceae bacterium SG-6C]
gi|338232114|gb|EGP07246.1| GTP-binding protein HflX [Bradyrhizobiaceae bacterium SG-6C]
Length = 436
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/304 (45%), Positives = 187/304 (61%), Gaps = 27/304 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE + I ++D + ++ LS +QQRNLE+ W VLDR GLI+
Sbjct: 57 RPATYLGKGKVEEMLGLIKA----NDVDLVVMDCALSPVQQRNLEKEWKAKVLDRTGLIL 112
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 113 EIFGRRAKTREGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 155
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER S + S++++V+ TR + RA R+R VA+VG
Sbjct: 156 FMGGPGETQIEADRRMISERISKIESELKKVQATRRLHRAGRQRVP------YRVVALVG 209
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFISDLP LV
Sbjct: 210 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISDLPTMLV 269
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EAD+++HV D + + E + V VL+Q+G+ + + ++EVWNKID
Sbjct: 270 AAFRATLEEVIEADVILHVRDISHEDAEAQQHDVEGVLRQLGIDTDGGQRILEVWNKIDR 329
Query: 425 HDEE 428
DEE
Sbjct: 330 FDEE 333
>gi|424914082|ref|ZP_18337446.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392850258|gb|EJB02779.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 441
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 50/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVTGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 431
EADL++HV D + P+ + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAAKRLIEVWNKIDRLEPEVHD 337
>gi|91977066|ref|YP_569725.1| HSR1-like GTP-binding protein [Rhodopseudomonas palustris BisB5]
gi|91683522|gb|ABE39824.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris
BisB5]
Length = 434
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 203/350 (58%), Gaps = 46/350 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA LA ++ D + + L P + R T+ G G VE I
Sbjct: 28 ARLDEAAGLARAI--------DLEIAEAVLTP----------ISQIRPATYLGKGKVEEI 69
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
I G E+ D + ++ LS IQQRNLE+AWG VLDR GLI+EIF A TKE L
Sbjct: 70 LGIIKGHEA----DLVVMDCALSPIQQRNLEKAWGAKVLDRTGLILEIFGRRAKTKEGSL 125
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y++SRLVR T E R GG GF+ G GET+++ R
Sbjct: 126 QVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEADR 168
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I +R + L +++++V+ TR + RA R+R VA+VGYTNAGKSTL + L+
Sbjct: 169 RLIGDRITRLENELKKVQATRRLHRAGRQRVP------YRVVALVGYTNAGKSTLFNRLT 222
Query: 319 DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 378
+D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP QLV AF ATLEEV+EAD
Sbjct: 223 RADVQAADMLFATLDPTLRALSLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEAD 282
Query: 379 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
L++HV D + E V VL+Q+GV E ++E+WNKID + E
Sbjct: 283 LILHVRDIAHEDAEAQDRDVDAVLRQLGV-EADSGRILEIWNKIDRFEPE 331
>gi|84501097|ref|ZP_00999332.1| GTP-binding protein HflX [Oceanicola batsensis HTCC2597]
gi|84391164|gb|EAQ03582.1| GTP-binding protein HflX [Oceanicola batsensis HTCC2597]
Length = 424
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/319 (44%), Positives = 196/319 (61%), Gaps = 30/319 (9%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
+ LP VV + ++ T FG G V + A++K EL + V+ ++ +QQ
Sbjct: 39 RALPGLEVVGSSIVRLANPTPATLFGSGKVAELSAFF--ADNKVEL--VLVDGPVTPVQQ 94
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 95 RNLEKAWGGKLLDRTGLILEIFSDRARTREGVLQVEMAALAYQRTRLVRA------WTHL 148
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I E+ + L Q+E+V RTR + RAA
Sbjct: 149 E-----------RQRGGLGFVGGPGETQIEADRRAIDEQLTRLRRQLEKVVRTRELHRAA 197
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-G 344
R R VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP+ G
Sbjct: 198 RARVP------FPIVALVGYTNAGKSTLFNRLTGAEVLAKDMLFATLDPTMRRVRLPNNG 251
Query: 345 RKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 404
+V+LSDTVGFISDLP QLV AF ATLEEV+EADL++H+ D + P EE + V +L
Sbjct: 252 PEVILSDTVGFISDLPTQLVAAFRATLEEVLEADLILHIRDISHPEAEEQKADVEDILSD 311
Query: 405 VGVSEEKLKNMIEVWNKID 423
+G+ EE ++EVWNK+D
Sbjct: 312 LGLPEE--VPVLEVWNKVD 328
>gi|329850675|ref|ZP_08265520.1| GTP-binding protein HflX [Asticcacaulis biprosthecum C19]
gi|328840990|gb|EGF90561.1| GTP-binding protein HflX [Asticcacaulis biprosthecum C19]
Length = 441
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 214/396 (54%), Gaps = 54/396 (13%)
Query: 41 NKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFD 100
+K D+ D+V DPD + R P ++L+EA+ LA +L+ + G
Sbjct: 3 DKYIDNAPDIVRAVVIDPDIA---HAAEQRAAPRLLEDSRLDEAIGLALALDLEIAGSL- 58
Query: 101 TDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNA 158
S++ K T FG G VE IK E+DA VN
Sbjct: 59 -----------------SVRVRKLNPATLFGAGKVEEIKALCE------EVDASLCVVNG 95
Query: 159 ILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGP 218
L+ IQQRNLE+ + V+DR G+I+EIF A T+E KLQ ELA L Y+KSRLVR
Sbjct: 96 SLTPIQQRNLEKELERKVIDRTGMILEIFGRRARTREGKLQVELARLEYEKSRLVRT--- 152
Query: 219 DGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRT 278
T E A + G GET+++L RR I ++ L ++++EVRRT
Sbjct: 153 ---WTHLERQRATGTT------------GGPGETQIELDRRMIADKIKQLKTELDEVRRT 197
Query: 279 RAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKS 338
RA+ R R++ VA+VGYTNAGKSTL + L+ +++ + LFATLD L++
Sbjct: 198 RALHRVQRKK------VPYPIVALVGYTNAGKSTLFNHLTRAEVVAKDLLFATLDTTLRT 251
Query: 339 VVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTV 398
+ LP+GR +LSDTVGFISDLP +LV AF ATLEEV +ADL++HV D + P E R V
Sbjct: 252 LKLPNGRSAMLSDTVGFISDLPHELVAAFRATLEEVEQADLILHVRDVSNPETEAQRQDV 311
Query: 399 LQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEY 434
QVLQ + + + M EVWNKID D + +V Y
Sbjct: 312 EQVLQHI-LPDLDRGRMFEVWNKIDLLDPDSKEVLY 346
>gi|365888714|ref|ZP_09427459.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. STM 3809]
gi|365335599|emb|CCD99990.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. STM 3809]
Length = 459
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/306 (46%), Positives = 188/306 (61%), Gaps = 27/306 (8%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
G+ R T+ G G V+ I I A EL + ++ LS IQQRNLE+AW VLDR G
Sbjct: 77 GQIRPATYLGKGKVDEIAGVI--ASQGAEL--VVMDCALSPIQQRNLEKAWNTKVLDRTG 132
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A TKE LQ ELA L Y++SRLVR T E R G
Sbjct: 133 LILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRG 175
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R VA
Sbjct: 176 GFGFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQRVP------YRVVA 229
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPL 361
+VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP
Sbjct: 230 LVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPT 289
Query: 362 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 421
QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E +IEVWNK
Sbjct: 290 QLVAAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLSQLGIDPEATDTIIEVWNK 349
Query: 422 IDYHDE 427
ID D+
Sbjct: 350 IDRLDD 355
>gi|148255461|ref|YP_001240046.1| GTP-binding protein (hflX) [Bradyrhizobium sp. BTAi1]
gi|146407634|gb|ABQ36140.1| GTP-binding protein HflX [Bradyrhizobium sp. BTAi1]
Length = 459
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/306 (45%), Positives = 187/306 (61%), Gaps = 27/306 (8%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
+ R T+ G G V+ I I G + + + ++ LS IQQRNLE+AW VLDR G
Sbjct: 77 AQIRPATYLGKGKVDEIAGVIAGQGA----ELVVMDCALSPIQQRNLEKAWNTKVLDRTG 132
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A TKE LQ ELA L Y++SRLVR T E R G
Sbjct: 133 LILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRG 175
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R VA
Sbjct: 176 GFGFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQR------VPYRVVA 229
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPL 361
+VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP
Sbjct: 230 LVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAITLPHGGKAMLSDTVGFISNLPT 289
Query: 362 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 421
QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E +IEVWNK
Sbjct: 290 QLVAAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLGQLGIDPEATDTIIEVWNK 349
Query: 422 IDYHDE 427
ID DE
Sbjct: 350 IDRLDE 355
>gi|307942253|ref|ZP_07657604.1| GTP-binding protein HflX [Roseibium sp. TrichSKD4]
gi|307774539|gb|EFO33749.1| GTP-binding protein HflX [Roseibium sp. TrichSKD4]
Length = 463
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/308 (44%), Positives = 185/308 (60%), Gaps = 27/308 (8%)
Query: 119 LKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLD 178
+K + T FG G V + G + E D + ++ L+ IQQRNLE+ V+D
Sbjct: 83 VKVNNPKPATLFGEGKV----SELTGIVAAQEADLVVIDHPLTPIQQRNLEKHLKTKVID 138
Query: 179 RVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR 238
R GLI+EIF A TKE KLQ +LA L ++KSRLVR T E R
Sbjct: 139 RTGLILEIFGDRARTKEGKLQVDLAHLTWQKSRLVR------SWTHLE-----------R 181
Query: 239 GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
GG GF+ G GET+++ RR+I +R + L Q+E+VRRTR + R R++
Sbjct: 182 QRGGTGFMGGPGETQIESDRRQIQDRITALQKQLEQVRRTRDLHRKKRKKIPQP------ 235
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
VA+VGYTNAGKSTL + +++S++F+ LFATLDP L+ + LP GR+++LSDTVGFISD
Sbjct: 236 VVALVGYTNAGKSTLFNRMTESNVFAKDLLFATLDPTLRKIRLPHGREIILSDTVGFISD 295
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP LV AF ATLEEV+EADL++HV D + P+ E V + L +GV +IEV
Sbjct: 296 LPTHLVAAFRATLEEVLEADLILHVRDISHPDSEAQCEDVKKTLVDLGVDGSHAAPVIEV 355
Query: 419 WNKIDYHD 426
WNKID D
Sbjct: 356 WNKIDALD 363
>gi|254421034|ref|ZP_05034758.1| GTP-binding proten HflX [Brevundimonas sp. BAL3]
gi|196187211|gb|EDX82187.1| GTP-binding proten HflX [Brevundimonas sp. BAL3]
Length = 437
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 187/301 (62%), Gaps = 27/301 (8%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G VE + + A++ +A+ ++ L+ +QQRNLE+AW V+DR GLI+EIF
Sbjct: 63 TLFGSGKVEELAALVRAADA----EAVIIDDALTPVQQRNLEKAWEVKVIDRTGLILEIF 118
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKE +LQ ELA L Y++SRLVR T E R GG G
Sbjct: 119 GRRARTKEGRLQVELARLDYERSRLVRT------WTHLE-----------RQRGGTGSTG 161
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++L RR I +R L +++EEVRRTR + R R++ T+A+VGYTN
Sbjct: 162 GPGETQIELDRRLIADRIVRLKAELEEVRRTRGLHRKQRQKVP------FPTIALVGYTN 215
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + L+ S++F+ LFATLD +++ LP GR +++DTVGFISDLP +LV++F
Sbjct: 216 AGKSTLFNRLTGSEVFAKDLLFATLDTTQRTIRLPQGRPAIVADTVGFISDLPHELVESF 275
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEEV EADL++HV D + + + V VL+Q+ E K + ++EVWNKID D+
Sbjct: 276 RATLEEVGEADLILHVRDIASADSDAQAKDVETVLKQIETPEGKTRRVLEVWNKIDLLDD 335
Query: 428 E 428
E
Sbjct: 336 E 336
>gi|86357576|ref|YP_469468.1| GTP-binding protein [Rhizobium etli CFN 42]
gi|86281678|gb|ABC90741.1| GTP-binding protein [Rhizobium etli CFN 42]
Length = 441
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 206/357 (57%), Gaps = 50/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRLLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 431
EADL++HV D + P+ + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAEKRLIEVWNKIDRLEPEVHD 337
>gi|335037229|ref|ZP_08530540.1| GTP-binding protein [Agrobacterium sp. ATCC 31749]
gi|333791385|gb|EGL62771.1| GTP-binding protein [Agrobacterium sp. ATCC 31749]
Length = 482
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 168/435 (38%), Positives = 225/435 (51%), Gaps = 73/435 (16%)
Query: 13 LRSITQTLTF------PISLHSYSYSSSKRQTKDNKDKDDLHDVVTL-------FNRDPD 59
+RS TF PIS + SS + K +DD+ VV + NRD
Sbjct: 1 MRSAVTFFTFFLDKAEPIS--TRDTSSESIIPEQEKRRDDMRAVVLVPVLKQQRENRDAA 58
Query: 60 DPPRLFLVQPRLKPPTFLQAKLNEA--LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P P ++AKL EA L LA LE V Q
Sbjct: 59 SAP--------AAPGRSVEAKLEEAKGLALAIDLE--------------------VTQGL 90
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
+ + R T FG G +E I ++ +S + V+ L+ +QQRNLE+ W V+
Sbjct: 91 VVPVNQPRPATLFGTGKIEEIGHLLDETDS----GLVIVDHPLTPVQQRNLEKQWNAKVI 146
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 147 DRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE----------- 189
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR + +R L ++E+V RTR + RA RR+
Sbjct: 190 RQRGGAGFMGGPGETQIEADRRLLQDRIVKLEKELEQVVRTRQLHRAKRRKVPHP----- 244
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFIS
Sbjct: 245 -IVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFIS 303
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMI 416
DLP LV AF ATLEEV+EADL++HV D + P+ VL++L +G+ E E K +I
Sbjct: 304 DLPTHLVAAFRATLEEVLEADLVLHVRDMSDPDNAAQSADVLRILGDLGIDEKEAEKRII 363
Query: 417 EVWNKIDYHDEEMGD 431
EVWNK+D + E D
Sbjct: 364 EVWNKVDRLEPEAHD 378
>gi|407781505|ref|ZP_11128723.1| putative GTP-binding protein (HflX-like) [Oceanibaculum indicum
P24]
gi|407207722|gb|EKE77653.1| putative GTP-binding protein (HflX-like) [Oceanibaculum indicum
P24]
Length = 456
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 140/317 (44%), Positives = 192/317 (60%), Gaps = 28/317 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + ++ +A T G G VE I+ E ++ ++ LS +QQRNLER+
Sbjct: 68 IVHSEVVRVSRATPATLMGSGQVERFADVIDAME----IEVAVIDTALSPVQQRNLERSL 123
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A A T E +LQ ELAAL Y++SRLVR T E
Sbjct: 124 KCKVIDRTALILEIFGARARTHEGRLQVELAALTYQRSRLVR------SWTHLE------ 171
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GE++++L RR I ++ L Q++EV+RTR + R+ARR+
Sbjct: 172 -----RQRGGAGFMGGPGESQIELDRRIIDDKIVKLKRQLDEVKRTRELHRSARRKVP-- 224
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + ++ S +F+ LFATLDP ++ + LPSGR+++LSDT
Sbjct: 225 ----YPIVALVGYTNAGKSTLFNRMTRSAVFAKDLLFATLDPTMRRLSLPSGRQIILSDT 280
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS-EEK 411
VGFISDLP QLV AF ATLEEV+EAD+++HV D P+ R V VL +G++ EE
Sbjct: 281 VGFISDLPTQLVAAFRATLEEVLEADIILHVRDVAHPDSAAQRADVEAVLADLGIAPEES 340
Query: 412 LKNMIEVWNKIDYHDEE 428
+IEV NK+D EE
Sbjct: 341 DTPIIEVLNKVDLLPEE 357
>gi|209963483|ref|YP_002296398.1| GTP-binding protein hflX [Rhodospirillum centenum SW]
gi|209956949|gb|ACI97585.1| GTP-binding protein hflX, putative [Rhodospirillum centenum SW]
Length = 430
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 179/274 (65%), Gaps = 23/274 (8%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+ V+ L+ +QQRNLE+AW V+DR GLI+EIF A A T+E +LQ ELAAL Y++SRLV
Sbjct: 61 VVVDHALTPVQQRNLEKAWKAKVIDRTGLILEIFGARARTREGQLQVELAALTYQRSRLV 120
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
R T E R GG GF+ G GE++L++ RR I ER + L +++E
Sbjct: 121 R------SWTHLE-----------RQRGGFGFLGGPGESQLEIDRRLIGERIARLKAELE 163
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLD 333
EVRRTR + R AR + VA+VGYTNAGKSTL + ++ +D+F+ LFATLD
Sbjct: 164 EVRRTRGLHRRAREKVP------YPVVALVGYTNAGKSTLFNRMAGADVFAKDLLFATLD 217
Query: 334 PRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEE 393
P ++++ LPS RK++LSDTVGFISDLP LV+AF ATLEEV AD+++HV D + P+ E
Sbjct: 218 PTMRAITLPSNRKIILSDTVGFISDLPHGLVEAFRATLEEVQAADIVLHVRDVSHPDTEA 277
Query: 394 HRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+ V VL+++G+ + ++EV NKID E
Sbjct: 278 QKADVETVLRELGIEVDSDARVVEVLNKIDLVPE 311
>gi|218674750|ref|ZP_03524419.1| GTP-binding protein [Rhizobium etli GR56]
Length = 397
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 149/367 (40%), Positives = 208/367 (56%), Gaps = 46/367 (12%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGQVVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR + +R L ++E+V RTR + RA RR+ VA+VGYTNAGKSTL + +
Sbjct: 169 RRLLQDRIIKLERELEQVVRTRQLHRAKRRKVPHP------IVALVGYTNAGKSTLFNRI 222
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+EA
Sbjct: 223 TGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEA 282
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGDVEYID 436
DL++HV D + P+ + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 283 DLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAEKRLIEVWNKIDRLEPEVHDAMVQK 342
Query: 437 GDDISNF 443
SN
Sbjct: 343 AAGASNV 349
>gi|392377175|ref|YP_004984334.1| putative GTP-binding protein (HflX-like) [Azospirillum brasilense
Sp245]
gi|356878656|emb|CCC99544.1| putative GTP-binding protein (HflX-like) [Azospirillum brasilense
Sp245]
Length = 419
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 141/316 (44%), Positives = 188/316 (59%), Gaps = 27/316 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + G GTVE H + E + ++ LS +QQRNLE+A
Sbjct: 35 VVHAECARVNRPQPSILLGSGTVE----HFAQIVEETEASLVILDHALSPVQQRNLEKAL 90
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A T+E LQ ELAAL Y+KSRLVR T E
Sbjct: 91 KVKVIDRTGLILEIFGARARTREGMLQVELAALTYQKSRLVR------SWTHLE------ 138
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GE++L++ RR I +R + ++EEVRRTR + R AR +
Sbjct: 139 -----RQRGGFGFLGGPGESQLEMDRRLIGDRIVKIKKELEEVRRTRGLHRKARAK---- 189
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + L+++D+F+ LFATLDP ++ V LPSGRKV+LSDT
Sbjct: 190 --VPYPVVALVGYTNAGKSTLFNRLANADVFAKDLLFATLDPTMRQVTLPSGRKVILSDT 247
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFISDLP LV AF ATLEEV AD+++HV D + + E + V +V+ +G+ +
Sbjct: 248 VGFISDLPHGLVAAFRATLEEVDAADIILHVRDVSHQDSEPQKADVHEVMSDMGIDPDAD 307
Query: 413 KNMIEVWNKIDYHDEE 428
+IEV NKID D+E
Sbjct: 308 DRVIEVLNKIDALDDE 323
>gi|424881471|ref|ZP_18305103.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WU95]
gi|392517834|gb|EIW42566.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WU95]
Length = 441
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 206/357 (57%), Gaps = 50/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGQIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKVWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 431
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEAEKRLIEVWNKIDRLEPEVHD 337
>gi|384921713|ref|ZP_10021680.1| GTP-binding protein, HSR1-like [Citreicella sp. 357]
gi|384464380|gb|EIE48958.1| GTP-binding protein, HSR1-like [Citreicella sp. 357]
Length = 417
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 186/304 (61%), Gaps = 29/304 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G +E ++ I E ++ + V+ +S +QQRNLE+AW +LDR GLI+EIF
Sbjct: 54 TLFGSGKIEELRARIEAEE----IELVLVDGPVSPVQQRNLEKAWKVKLLDRTGLILEIF 109
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T+E LQ E+AAL Y+++RLVR T E R GG GF+
Sbjct: 110 SDRAATREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQRGGLGFVG 152
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I E+ L Q++ V +TR + R AR + VA+VGYTN
Sbjct: 153 GPGETQIEADRRAIDEQLVRLRRQLDRVVKTRELHRKARAKVP------YPIVALVGYTN 206
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + L+ +D+ + LFATLDP +++V LP+G V+LSDTVGFISDLP +LV AF
Sbjct: 207 AGKSTLFNRLTGADVMAKDMLFATLDPTMRAVRLPTGIDVILSDTVGFISDLPTELVAAF 266
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEEV+ AD+++HV D + PN E V Q+L +GV+E+ ++EVWNK D D
Sbjct: 267 RATLEEVIAADIILHVRDISHPNTAEQARDVDQILTSLGVNED--VPLLEVWNKTDRLDP 324
Query: 428 EMGD 431
E D
Sbjct: 325 ESHD 328
>gi|339022397|ref|ZP_08646343.1| GTP-binding GTPase HflX/HSR1 [Acetobacter tropicalis NBRC 101654]
gi|338750587|dbj|GAA09647.1| GTP-binding GTPase HflX/HSR1 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 150/388 (38%), Positives = 212/388 (54%), Gaps = 57/388 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA S+ V+V+ L R+ T G G V++
Sbjct: 34 EARLEEAVGLAASI------------------GLVIVRQAVLLVRAKRSATLLGSGQVDS 75
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+K + ++D + V+A L+ QQRNLE +G V+DR GLI++IF A A TKE
Sbjct: 76 LKVAVKA----DKIDVLVVDARLTPGQQRNLETEFGCKVIDRTGLILDIFGARAATKEGT 131
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR+ T E R GG GF+ G GET+++
Sbjct: 132 LQVELAHLEYQRSRLVRL------WTHLE-----------RQRGGFGFLGGPGETQIEAD 174
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I +R L ++E+VRRTR + R AR+R VA+VGYTNAGKSTL +AL
Sbjct: 175 RRMIGDRIVRLKKELEQVRRTRGLHRQARKRVP------FPVVALVGYTNAGKSTLFNAL 228
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ + +++ +LFATLDP ++++ LPSGR+++LSDTVGFISDLP +L+ AF ATLEEV EA
Sbjct: 229 TGATVYAKDQLFATLDPTMRAITLPSGRRIILSDTVGFISDLPTELIAAFRATLEEVAEA 288
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVG----VSEEKLKNMIEVWNKIDY--------H 425
D+++HV D P+ + V VL + + + MIEV NK D
Sbjct: 289 DIILHVRDIAHPDSAAQKKDVFGVLDGMARDDMIESDWASRMIEVMNKADLLGGPDAVPQ 348
Query: 426 DEEMGDVEYIDGDDISNFSRAEDKDTTS 453
E+ + I GD + D+ TS
Sbjct: 349 TEDTVAISAITGDGLPALMDVIDRRITS 376
>gi|395789393|ref|ZP_10468913.1| GTP-binding protein HflX [Bartonella taylorii 8TBB]
gi|395429936|gb|EJF95988.1| GTP-binding protein HflX [Bartonella taylorii 8TBB]
Length = 447
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 182/320 (56%), Gaps = 27/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T G G V+ + +I S+ ++ V+ L+ +QQRNLE+ W
Sbjct: 60 VVHYEAVNIAAPRPATLLGKGKVDALAHYI----SEYYIELAVVDYFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRAQTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRILQEKIIRIRRELETVIKTRALHRAKRKKASHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ V+LP G+ +LL DT
Sbjct: 219 ------VVALVGYTNTGKSTLFNQLSGADVLAKDMLFATLDPTLRKVILPHGKTILLFDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEVVEADL++HV D + H VL+VL +G++ +
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVVEADLILHVRDMADVDHYAHAKDVLEVLSSLGINVDDT 332
Query: 413 KNMIEVWNKIDYHDEEMGDV 432
+++IEVWNKID DE +V
Sbjct: 333 EHIIEVWNKIDLLDEHALNV 352
>gi|192291246|ref|YP_001991851.1| GTP-binding proten HflX [Rhodopseudomonas palustris TIE-1]
gi|192284995|gb|ACF01376.1| GTP-binding proten HflX [Rhodopseudomonas palustris TIE-1]
Length = 455
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 202/353 (57%), Gaps = 46/353 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA LA ++ D D + L P + R T+ G G VE I
Sbjct: 49 ARLDEAAGLARAI--------DLDVVEAVLTP----------ISQIRPATYLGKGKVEEI 90
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
I + D I ++ LS IQQRNLE+AW VLDR GLI+EIF A T+E L
Sbjct: 91 VGLIAAHGA----DLIVMDCALSPIQQRNLEKAWNAKVLDRTGLILEIFGRRAKTREGTL 146
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y++SRLVR T E R GG GF+ G GET+++ R
Sbjct: 147 QVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEADR 189
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I ER + L +++++V+ TR + RA R+R VA+VGYTNAGKSTL + L+
Sbjct: 190 RLIGERITKLEAELKKVQATRRLHRAGRQRVP------YRVVALVGYTNAGKSTLFNRLT 243
Query: 319 DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 378
+D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP QLV AF ATLEEV+EAD
Sbjct: 244 RADVQAADMLFATLDPTLRAIQLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEAD 303
Query: 379 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGD 431
L++HV D + + E + V VL+Q+GV ++EVWNKID + E D
Sbjct: 304 LILHVRDISHEDAEAQQHDVDNVLRQLGVDAAS-GRIVEVWNKIDRFEPEQRD 355
>gi|451940610|ref|YP_007461248.1| GTP-binding protein HflX [Bartonella australis Aust/NH1]
gi|451899997|gb|AGF74460.1| GTP-binding protein HflX [Bartonella australis Aust/NH1]
Length = 447
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 183/320 (57%), Gaps = 27/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + R TFFG G V+T +I SK + V+ L+ +QQ NLE++W
Sbjct: 60 VVHHEIINITTPRPLTFFGAGKVDTFADYI----SKHRIALAIVDHCLTPVQQHNLEKSW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTVLILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + ++ + + +++ + +TR++ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQDKITRIRRELDTIVKTRSLHRAKRKKTPHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + LS +++ + LFATLDP L+ ++LP G+ +LLSDT
Sbjct: 219 ------VVALVGYTNAGKSTLFNYLSGANVLTKNMLFATLDPTLRKIILPHGQTILLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFISDLP L+ AF ATLEEVVEADL++HV D + P+ H VL++L +GV
Sbjct: 273 VGFISDLPTHLIAAFRATLEEVVEADLILHVRDMSDPDHRAHSQDVLEILSSLGVDIGDT 332
Query: 413 KNMIEVWNKIDYHDEEMGDV 432
++EVWNKID D+ V
Sbjct: 333 DRILEVWNKIDILDKHTLSV 352
>gi|39935664|ref|NP_947940.1| GTP-binding protein HSR1-related [Rhodopseudomonas palustris
CGA009]
gi|39649517|emb|CAE28039.1| GTP binding protein-like [Rhodopseudomonas palustris CGA009]
Length = 424
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 202/353 (57%), Gaps = 46/353 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA LA ++ D D + L P + R T+ G G VE
Sbjct: 18 ARLDEAAGLARAI--------DLDVVEAVLTP----------ISQIRPATYLGKGKVE-- 57
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
I G + D I ++ LS IQQRNLE+AW VLDR GLI+EIF A T+E L
Sbjct: 58 --EIVGLIAAHGADLIVMDCALSPIQQRNLEKAWNAKVLDRTGLILEIFGRRAKTREGTL 115
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y++SRLVR T E R GG GF+ G GET+++ R
Sbjct: 116 QVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEADR 158
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I ER + L +++++V+ TR + RA R+R VA+VGYTNAGKSTL + L+
Sbjct: 159 RLIGERITKLEAELKKVQATRRLHRAGRQRVP------YRVVALVGYTNAGKSTLFNRLT 212
Query: 319 DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 378
+D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP QLV AF ATLEEV+EAD
Sbjct: 213 RADVQAADMLFATLDPTLRAIQLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEAD 272
Query: 379 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGD 431
L++HV D + + E + V VL+Q+GV ++EVWNKID + E D
Sbjct: 273 LILHVRDISHEDAEAQQHDVDNVLRQLGVDAAS-GRIVEVWNKIDRFEPEQRD 324
>gi|90424082|ref|YP_532452.1| HSR1-like GTP-binding protein [Rhodopseudomonas palustris BisB18]
gi|90106096|gb|ABD88133.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris
BisB18]
Length = 461
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 144/317 (45%), Positives = 193/317 (60%), Gaps = 30/317 (9%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
G+ R T+ G G VE I GA E D + ++ LS IQQRNLE+AW VLDR G
Sbjct: 77 GQIRPATYLGKGKVE----EILGAIKAHEADLVVMDCALSPIQQRNLEKAWSAKVLDRTG 132
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A TKE LQ ELA L Y++SRLVR T E R G
Sbjct: 133 LILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRG 175
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G GF+ G GET+++ RR I +R S + ++I++V+ TR + RA R+R VA
Sbjct: 176 GFGFMGGPGETQIEADRRLIGDRISKIENEIKKVQGTRRLHRAGRQRVP------YRVVA 229
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPL 361
+VGYTNAGKSTL + L+ +++ + LFATLDP L+++ LP G K +LSDTVGFIS+LP
Sbjct: 230 LVGYTNAGKSTLFNRLTRAEVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPT 289
Query: 362 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN--MIEVW 419
QLV AF ATLEEV+EADL++HV D + + + V VL+Q+G+ E +IEVW
Sbjct: 290 QLVAAFRATLEEVLEADLILHVRDIAHEDADAQQDDVAAVLRQLGIDPEAGGGGRIIEVW 349
Query: 420 NKID-YHDEEMGDVEYI 435
NKID + +E+ ++ I
Sbjct: 350 NKIDRFAADELANLRNI 366
>gi|316934207|ref|YP_004109189.1| GTP-binding proten HflX [Rhodopseudomonas palustris DX-1]
gi|315601921|gb|ADU44456.1| GTP-binding proten HflX [Rhodopseudomonas palustris DX-1]
Length = 456
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 203/353 (57%), Gaps = 46/353 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA LA ++ D D + L P + R T+ G G VE I
Sbjct: 50 ARLDEAAGLARAI--------DLDVVEAVLTP----------ISQIRPATYLGKGKVEDI 91
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
I + D + ++ LS IQQRNLE+AW VLDR GLI+EIF A T+E L
Sbjct: 92 VGLIAAHGA----DLVVMDCALSPIQQRNLEKAWNAKVLDRTGLILEIFGRRAKTREGTL 147
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y++SRLVR T E R GG GF+ G GET+++ R
Sbjct: 148 QVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEADR 190
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I ER + L +++++V+ TR + RA R+R VA+VGYTNAGKSTL + L+
Sbjct: 191 RLIGERITKLEAELKKVQATRRLHRAGRQRVP------YRVVALVGYTNAGKSTLFNRLT 244
Query: 319 DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 378
+D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP QLV AF ATLEEV+EAD
Sbjct: 245 RADVQAADMLFATLDPTLRAIQLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEAD 304
Query: 379 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGD 431
L++HV D + + E ++ V VL+Q+GV ++EVWNKID + E D
Sbjct: 305 LILHVRDISHEDAEAQQSDVDNVLRQLGVDAAS-GRILEVWNKIDRFEPEQRD 356
>gi|402487604|ref|ZP_10834422.1| GTP-binding proten HflX [Rhizobium sp. CCGE 510]
gi|401813473|gb|EJT05817.1| GTP-binding proten HflX [Rhizobium sp. CCGE 510]
Length = 441
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 228/434 (52%), Gaps = 78/434 (17%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVTGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK +N +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLNERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD--- 431
EADL++HV D P+ + + V+++L +G+ E E K +IEVWNKID + + D
Sbjct: 281 EADLILHVRDMADPDNQVQSSDVMRILGDLGIDEAEAEKRLIEVWNKIDRLEPAVHDTMV 340
Query: 432 -----------VEYIDG-------DDIS-NFSRAEDKDTTSEPVDVECIDNYGGDDA--- 469
V + G D+IS S + T PVD + + D A
Sbjct: 341 QKSAGASNVVAVSAVSGEGVDTLMDEISRRLSGVMTEATVRLPVDKLALLPWLYDHAIVD 400
Query: 470 ---DNNDGFVSEDL 480
DN DG ++ DL
Sbjct: 401 AREDNEDGSITLDL 414
>gi|430003573|emb|CCF19362.1| putative GTP-binding protein (hflX) [Rhizobium sp.]
Length = 456
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 202/355 (56%), Gaps = 46/355 (12%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA +++ + VVQ ++ + R T G G +
Sbjct: 43 EARLEEAIGLARAIDLE------------------VVQGLIVQVSQPRPATLMGTGKIGE 84
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ ++ + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 85 IKALLDQHDA----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 140
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 141 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGAGFMGGPGETQIEAD 183
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR + ER L ++E+V RTR + RA RR+ VA+VGYTNAGKSTL + +
Sbjct: 184 RRLLQERIVKLERELEQVVRTRQLHRAKRRKVPHP------IVALVGYTNAGKSTLFNRI 237
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+EA
Sbjct: 238 TGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEA 297
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 431
DL++HV D + P+ V+++L +G+ E E+ +IEVWNKID D E D
Sbjct: 298 DLILHVRDMSDPDNAAQSADVMRILSDLGIDEKEREARIIEVWNKIDRLDPEAHD 352
>gi|319407328|emb|CBI80971.1| GTP-binding protein hflX [Bartonella sp. 1-1C]
Length = 448
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 184/316 (58%), Gaps = 27/316 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + TFF G +IN + + V+ L+ +QQRNLE+ W
Sbjct: 61 VVHYEIINIAKPCSSTFFRIGKANEFAHYIN----EHHIMLSIVDHFLTPVQQRNLEKLW 116
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 117 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE------ 164
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + + + ++E V +TRA+ RA R+R
Sbjct: 165 -----RQRGGTGFLGGPGETQIEADRRLLQNKIISIRRELETVVKTRALHRAKRKRIPH- 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+A+VGYTNAGKSTL + LSDS++ ++ LFATLDP L+ +VLP G+ VLLSDT
Sbjct: 219 -----PVIALVGYTNAGKSTLFNRLSDSNVLAEDMLFATLDPTLRKIVLPHGQTVLLSDT 273
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEV+EADL++HV D + P+ H V ++L +GV
Sbjct: 274 VGFISNLPTHLIAAFRATLEEVIEADLILHVRDVSDPDHYAHAQDVFEILSDLGVDINDT 333
Query: 413 KNMIEVWNKIDYHDEE 428
+++E+WNKID D+
Sbjct: 334 DHIVEIWNKIDTLDQH 349
>gi|424894930|ref|ZP_18318504.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393179157|gb|EJC79196.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 441
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 149/369 (40%), Positives = 207/369 (56%), Gaps = 50/369 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVAIVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGDVEY 434
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEADKRLIEVWNKIDRLEPEVHDAMV 340
Query: 435 IDGDDISNF 443
SN
Sbjct: 341 QKSSGASNV 349
>gi|414173418|ref|ZP_11428181.1| GTP-binding protein HflX [Afipia broomeae ATCC 49717]
gi|410892070|gb|EKS39866.1| GTP-binding protein HflX [Afipia broomeae ATCC 49717]
Length = 458
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 187/304 (61%), Gaps = 27/304 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE + G ++D + ++ LS +QQRNLE+ W VLDR GLI+
Sbjct: 79 RPATYLGKGKVE----EMIGLIKANQVDLVVMDCALSPVQQRNLEKEWNAKVLDRTGLIL 134
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 135 EIFGRRAKTREGTLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 177
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R S + S++++V+ TR + RA R+R VA+VG
Sbjct: 178 FMGGPGETQIEADRRLIGDRISKIESELKKVQATRRLHRAGRQRVP------YRVVALVG 231
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFISDLP LV
Sbjct: 232 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISDLPTMLV 291
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EAD+++HV D + + + + V VL+Q+G+ + + ++EVWNKID
Sbjct: 292 AAFRATLEEVIEADVILHVRDISHEDADAQQHDVEGVLRQLGIDPDSGQRILEVWNKIDR 351
Query: 425 HDEE 428
DEE
Sbjct: 352 FDEE 355
>gi|392377300|ref|YP_004984459.1| putative GTP-binding protein (hflX) [Azospirillum brasilense Sp245]
gi|356878781|emb|CCC99673.1| putative GTP-binding protein (hflX) [Azospirillum brasilense Sp245]
Length = 468
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 199/345 (57%), Gaps = 45/345 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA+ LA ++ + PH V ++ + T FG GT + I
Sbjct: 59 ARLSEAIALAQAIRLE--------------VPHAEV----IRVARPDPATLFGRGTADRI 100
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
+ + D + ++ LS +QQRNLER V+DR GLI+EIF AHT+E +L
Sbjct: 101 GGMVEAFHA----DLVVIDHPLSPVQQRNLERRCMAKVIDRTGLILEIFGERAHTREGQL 156
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELAAL Y++SRLVR T E R GG GF+ G GE++L+L R
Sbjct: 157 QVELAALTYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGESQLELDR 199
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I ER S L S +EEVRRTR + R+AR+R GG+ VA+VGYTNAGKSTL + LS
Sbjct: 200 RLIAERISRLKSDLEEVRRTRKLHRSARQR-GGT-----PLVALVGYTNAGKSTLFNRLS 253
Query: 319 DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 378
+ + ++ LFATLDP ++ + L SG+ + LSDTVGF+S+LP QLV AF ATLEEV AD
Sbjct: 254 GAGVTAEDMLFATLDPTVRRIALSSGKTMALSDTVGFVSELPTQLVAAFRATLEEVQAAD 313
Query: 379 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
L++HV D + P+ + V VL +G+ ++EV NK D
Sbjct: 314 LILHVRDVSHPDTAAQKADVDSVLADLGIDAANDPRVVEVLNKTD 358
>gi|325292781|ref|YP_004278645.1| GTP-binding protein HflX [Agrobacterium sp. H13-3]
gi|325060634|gb|ADY64325.1| GTP-binding protein HFLX [Agrobacterium sp. H13-3]
Length = 479
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 158/393 (40%), Positives = 213/393 (54%), Gaps = 51/393 (12%)
Query: 42 KDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEA--LCLANSLEEQRDGYF 99
K +DD+ VV + R + P + P ++AKL EA L LA LE
Sbjct: 31 KHRDDMRAVVIVPVLKQQRESRDAVAGP-VSPVRSVEAKLEEAKGLALAIDLE------- 82
Query: 100 DTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAI 159
V Q + + R T FG G +E I H+ + G + V+
Sbjct: 83 -------------VTQGLVVPVNQPRPATLFGTGKIEEI-GHLLDETNSG---LVIVDHP 125
Query: 160 LSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPD 219
L+ +QQRNLE+ W V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR
Sbjct: 126 LTPVQQRNLEKQWNAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR----- 180
Query: 220 GRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTR 279
T E R GG GF+ G GET+++ RR + +R L ++E+V RTR
Sbjct: 181 -SWTHLE-----------RQRGGAGFMGGPGETQIEADRRLLQDRIVKLERELEQVVRTR 228
Query: 280 AVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSV 339
+ RA RR+ VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ +
Sbjct: 229 QLHRAKRRKVPHP------IVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRM 282
Query: 340 VLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVL 399
LP GR V+LSDTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ VL
Sbjct: 283 KLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDMSDPDNAAQSADVL 342
Query: 400 QVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 431
++L +G+ E E K +IEVWNK+D + E D
Sbjct: 343 RILGDLGIDEKEAEKRIIEVWNKVDRLEPEAHD 375
>gi|163868472|ref|YP_001609681.1| GTP-binding protein HflX [Bartonella tribocorum CIP 105476]
gi|161018128|emb|CAK01686.1| GTP-binding protein HflX [Bartonella tribocorum CIP 105476]
Length = 445
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 182/320 (56%), Gaps = 27/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T FG G + + +I+ K ++ ++ L+ +QQRNLE+ W
Sbjct: 60 VVNYETINLTTPRPATLFGKGKADVLADYID----KYSIELAIIDHFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+K RLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKGRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIIRIRRELETVVKTRALHRAKRKK---- 214
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + LS +D+ + LFATLDP L+ VVLP G+ +LLSDT
Sbjct: 215 --TSYPVVALVGYTNAGKSTLFNRLSGADVLAKNMLFATLDPTLRKVVLPHGKTILLSDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEVVEADL++HV D + H VL+VL + + +
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVVEADLILHVRDMLDLDHRTHAQDVLEVLSSLDIDIDDT 332
Query: 413 KNMIEVWNKIDYHDEEMGDV 432
+++IEVWNKID DE+ +V
Sbjct: 333 EHIIEVWNKIDMVDEQALNV 352
>gi|241204548|ref|YP_002975644.1| GTP-binding proten HflX [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858438|gb|ACS56105.1| GTP-binding proten HflX [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 441
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 50/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKVWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 431
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEAEKRLIEVWNKIDRLEPEVHD 337
>gi|414166887|ref|ZP_11423117.1| GTP-binding protein HflX [Afipia clevelandensis ATCC 49720]
gi|410892165|gb|EKS39960.1| GTP-binding protein HflX [Afipia clevelandensis ATCC 49720]
Length = 417
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 187/304 (61%), Gaps = 27/304 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE + I ++D + ++ LS +QQRNLE+ W VLDR GLI+
Sbjct: 38 RPATYLGKGKVEEMLGLIKA----NDVDLVVMDCALSPVQQRNLEKEWKAKVLDRTGLIL 93
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 94 EIFGRRAKTREGTLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 136
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER S + S++++V+ TR + RA R+R VA+VG
Sbjct: 137 FMGGPGETQIEADRRMISERISKIESELKKVQATRRLHRAGRQRVP------YRVVALVG 190
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFISDLP LV
Sbjct: 191 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISDLPTMLV 250
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EAD+++HV D + + E + V VL+Q+G+ + + ++EVWNKID
Sbjct: 251 AAFRATLEEVIEADVILHVRDISHEDAEAQQHDVEGVLRQLGIDLDGGQRILEVWNKIDR 310
Query: 425 HDEE 428
DE+
Sbjct: 311 FDED 314
>gi|420240081|ref|ZP_14744344.1| GTP-binding protein HflX [Rhizobium sp. CF080]
gi|398077716|gb|EJL68677.1| GTP-binding protein HflX [Rhizobium sp. CF080]
Length = 446
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 204/363 (56%), Gaps = 54/363 (14%)
Query: 69 PRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADT 128
P P +A+L EA+ LA +++ + +VQ + + R T
Sbjct: 24 PAPAPQRSNEARLEEAIGLAKAIDLE------------------IVQGLIVPISQPRPGT 65
Query: 129 FFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
G G +E IK ++ E DA + V+ L+ +QQRNLE+ W V+DR GLI+EI
Sbjct: 66 LMGTGKIEEIKALLD------EHDAGLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEI 119
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A TKE LQ +LA L Y+K RLVR T E R GG GF+
Sbjct: 120 FGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGAGFM 162
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVG 304
G GET+++ RR + ER L ++E+V RTR + RA RR+ H VA+VG
Sbjct: 163 GGPGETQIEADRRLLQERIVKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVG 214
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFIS+LP LV
Sbjct: 215 YTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISNLPTHLV 274
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKID 423
AF ATLEEV+EADL++HV D + P+ V+++L +G+ E E K +IEVWNKID
Sbjct: 275 AAFRATLEEVLEADLVLHVRDMSDPDNAAQAGDVMRILSDLGIDEKEAAKRIIEVWNKID 334
Query: 424 YHD 426
D
Sbjct: 335 RLD 337
>gi|99081196|ref|YP_613350.1| HSR1-like GTP-binding protein [Ruegeria sp. TM1040]
gi|99037476|gb|ABF64088.1| GTP-binding protein HSR1-related [Ruegeria sp. TM1040]
Length = 423
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/324 (42%), Positives = 193/324 (59%), Gaps = 29/324 (8%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV + + KA FG G +E +K E ++ + ++ +S +QQRN
Sbjct: 40 LPDLEVVGSTVVGLPKAHPGMLFGSGKIEELKTLFKAEE----VELVLIDGPVSPVQQRN 95
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 96 LEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE- 148
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAAR
Sbjct: 149 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLDKVVKTRTLHRAARA 198
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKV 347
+ VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP G +V
Sbjct: 199 KVP------YPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVELPDGPEV 252
Query: 348 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 407
+LSDTVGFISDLP +LV +F ATLEEV+ AD+++HV D + + E V Q+L +GV
Sbjct: 253 ILSDTVGFISDLPTELVASFRATLEEVLAADVILHVRDISHSDTEHQAEDVEQILSSLGV 312
Query: 408 SEEKLKNMIEVWNKIDYHDEEMGD 431
E+ + +IEVWNKID EE D
Sbjct: 313 DED--RTVIEVWNKIDQLSEEEAD 334
>gi|259416757|ref|ZP_05740677.1| GTP-binding protein HflX [Silicibacter sp. TrichCH4B]
gi|259348196|gb|EEW59973.1| GTP-binding protein HflX [Silicibacter sp. TrichCH4B]
Length = 423
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/324 (42%), Positives = 192/324 (59%), Gaps = 29/324 (8%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV + KA FG G +E +K E ++ + ++ +S +QQRN
Sbjct: 40 LPDLEVVGAKVVGLPKAHPGMLFGSGKIEELKTLFKAEE----VELVLIDGPVSPVQQRN 95
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 96 LEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE- 148
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAAR
Sbjct: 149 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLDKVVKTRTLHRAARA 198
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKV 347
+ VA+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ V LP G +V
Sbjct: 199 KIP------YPIVALVGYTNAGKSTLFNRLTGADVMAKDMLFATLDPTMRRVELPDGPEV 252
Query: 348 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 407
+LSDTVGFISDLP +LV +F ATLEEV+ AD+++HV D + + E V Q+L +GV
Sbjct: 253 ILSDTVGFISDLPTELVASFRATLEEVLAADVILHVRDISHSDTENQAEDVEQILNSLGV 312
Query: 408 SEEKLKNMIEVWNKIDYHDEEMGD 431
E+ + +IEVWNKID EE D
Sbjct: 313 DED--RALIEVWNKIDQLSEEDAD 334
>gi|407785662|ref|ZP_11132809.1| small GTP-binding protein [Celeribacter baekdonensis B30]
gi|407202612|gb|EKE72602.1| small GTP-binding protein [Celeribacter baekdonensis B30]
Length = 432
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 206/355 (58%), Gaps = 51/355 (14%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A L EA+ LA++L E E+ +V+ P ++ G+ FG G + +
Sbjct: 32 AGLEEAVALADALPEL------------EVVGSEIVRLPKMQPGQ-----LFGSGKIAEL 74
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
K +N AE +D + ++ +S +QQRNLE+ W +LDR GLI+EIF+ A T+E L
Sbjct: 75 KERLNAAE----VDLVLIDGRVSPVQQRNLEKEWKVKLLDRTGLILEIFSDRARTREGVL 130
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q E+AAL Y+++RLVR T E R GG GF+ G GET+++ R
Sbjct: 131 QVEMAALTYQRTRLVRA------WTHLE-----------RQRGGLGFVGGPGETQIEADR 173
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I + L Q+E+V +TR + RAAR + VA+VGYTNAGKST + ++
Sbjct: 174 RAIDDHLLRLKRQLEKVVKTRELHRAARAKVP------FPIVALVGYTNAGKSTFFNKVT 227
Query: 319 DSDLFSDARLFATLDPRLKSVVL--PSG---RKVLLSDTVGFISDLPLQLVDAFHATLEE 373
+D+F LFATLDP ++SVVL P G R+++LSDTVGFIS LP QLV AF ATLEE
Sbjct: 228 GADVFVKDMLFATLDPTMRSVVLEAPQGGTDREIILSDTVGFISSLPTQLVAAFRATLEE 287
Query: 374 VVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
V++ADL++HV D + +E V ++L +G+ E+ M EVWNKID D+E
Sbjct: 288 VLDADLILHVRDISHEKSDEQAADVRKILSDLGIKED--APMFEVWNKIDLLDDE 340
>gi|116252041|ref|YP_767879.1| GTP-binding protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115256689|emb|CAK07777.1| putative GTP-binding protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 441
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 50/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 431
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEAEKRLIEVWNKIDRLEPEVHD 337
>gi|406989154|gb|EKE08965.1| hypothetical protein ACD_16C00232G0025 [uncultured bacterium]
Length = 435
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 200/346 (57%), Gaps = 45/346 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA LA +++ G +FF K R T+ G VE
Sbjct: 36 EARLEEARGLAEAIQLDVKG---EEFF---------------KQHTIRPSTYISKGHVEE 77
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+K I + K +F++A +S +QQRNLE+ W V+DR GLI+EIF A A T E +
Sbjct: 78 LKGPIKALDVK----LVFIDAAISPVQQRNLEKIWNCKVIDRTGLILEIFGARARTAEGR 133
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELAAL Y++SRLVR T E R GG GFI G GET+L+L
Sbjct: 134 LQVELAALTYQRSRLVR------SWTHLE-----------RQRGGLGFIGGPGETQLELD 176
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + + +V++TR + R AR+R VA+VGYTNAGKSTL + L
Sbjct: 177 RRLIDERIMRIKKDLHKVQQTRTLHRKARKR------VPYPVVALVGYTNAGKSTLFNRL 230
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ + + ++ LFATLDP ++ V LPS R+++LSDTVGFIS+LP LV AF ATLEEV+EA
Sbjct: 231 TQAGVMAENILFATLDPTMRRVTLPSRREIILSDTVGFISELPTLLVAAFRATLEEVMEA 290
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
DL++HV D + P + + VL V+ ++G+ + ++ IEV NK D
Sbjct: 291 DLILHVRDVSHPESKSQQEDVLNVIAELGLEKAYEEHGIEVLNKAD 336
>gi|408380313|ref|ZP_11177897.1| GTP-binding protein HFLX [Agrobacterium albertimagni AOL15]
gi|407745526|gb|EKF57058.1| GTP-binding protein HFLX [Agrobacterium albertimagni AOL15]
Length = 444
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 205/357 (57%), Gaps = 50/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA +++ +VQ ++ + R T G G +
Sbjct: 31 EARLEEAIGLARAID------------------LTIVQGLIVQINQPRPATLMGSGKIAE 72
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+K ++ E L + V+ L+ +QQRNLE+ WG V+DR GLI+EIF A TKE
Sbjct: 73 VKALLD--EHNAGL--VIVDHPLTPVQQRNLEKEWGAKVIDRTGLILEIFGRRASTKEGT 128
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 129 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGAGFMGGPGETQIEAD 171
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR++ ++ L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 172 RRQLQDKIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 223
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V++SDTVGFISDLP LV AF ATLEEV+
Sbjct: 224 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVIMSDTVGFISDLPTHLVAAFRATLEEVL 283
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 431
EADL++HV D + P+ VL++L +G+ E E+ + ++EVWNKID D E D
Sbjct: 284 EADLVLHVRDMSDPDNGAQSADVLRILDDLGIDEKERAERILEVWNKIDRLDPENHD 340
>gi|433775414|ref|YP_007305881.1| GTP-binding protein HflX [Mesorhizobium australicum WSM2073]
gi|433667429|gb|AGB46505.1| GTP-binding protein HflX [Mesorhizobium australicum WSM2073]
Length = 463
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 206/381 (54%), Gaps = 55/381 (14%)
Query: 50 VVTLFNRDP---DDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDK 106
+V + R P DD R PRL +A+ +EA+ LA ++ D D
Sbjct: 32 IVPVLTRQPRNDDDTNR-----PRLTRSA--EARHDEAVGLARAI--------DLDLIHT 76
Query: 107 ELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
+ V V +P R T G G VE G +G + + V+ L+ +QQR
Sbjct: 77 AV---VTVNDP-------RPATLLGSGKVE----EFAGIVREGHAEVVIVDHPLTPVQQR 122
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLE+ + VLDR GLI+EIF A TKE LQ ELA L Y+K RLVR T E
Sbjct: 123 NLEKQFNAKVLDRTGLILEIFGERARTKEGTLQVELAHLNYQKGRLVR------SWTHLE 176
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
R GG GF+ G GET+++ RR++ E+ L ++E VRRTR + RA R
Sbjct: 177 -----------RQRGGAGFLGGPGETQIESDRRQLQEKIIKLKHELETVRRTRDLHRAKR 225
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRK 346
++ VA+VGYTNAGKSTL + L+ + + + LFATLDP L+ V LP G
Sbjct: 226 KK------VPFPVVAIVGYTNAGKSTLFNKLTGAGVLAQDMLFATLDPTLRRVRLPHGTP 279
Query: 347 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 406
++LSDTVGFISDLP L+ AF ATLEEVVEADL++H+ D + P+ V ++L +G
Sbjct: 280 IILSDTVGFISDLPTHLIAAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVERILADLG 339
Query: 407 VSEEKLKNMIEVWNKIDYHDE 427
V + +IEVWNKID DE
Sbjct: 340 VDASDTRRVIEVWNKIDLLDE 360
>gi|209542663|ref|YP_002274892.1| GTP-binding proten HflX [Gluconacetobacter diazotrophicus PAl 5]
gi|209530340|gb|ACI50277.1| GTP-binding proten HflX [Gluconacetobacter diazotrophicus PAl 5]
Length = 436
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 202/351 (57%), Gaps = 49/351 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA S+ V+V+ L R T G G VE+
Sbjct: 35 EARLEEAVGLAASIG------------------LVIVRQAVLVLRARRPSTLLGNGQVES 76
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
++ + + + + V++ LS +QQRNLERA G V+DR LI++IF A TKE
Sbjct: 77 LRAAVQ----QDRVAVVIVDSRLSPVQQRNLERALGCKVIDRTALILDIFGERAATKEGT 132
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 133 LQVELAHLEYQRSRLVRT------WTHLE-----------RQRGGFGFLGGPGETQIEAD 175
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I +R L ++E+VRRTR + RAARRR VA+VGYTNAGKSTL +AL
Sbjct: 176 RRMIGDRIVRLKRELEQVRRTRGLHRAARRRVP------FPVVALVGYTNAGKSTLFNAL 229
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ + +F+ +LFATLDP ++ + LPSGR+++LSDTVGFISDLP +L+ AF ATLEEV EA
Sbjct: 230 TGATVFAQDQLFATLDPTMRGIRLPSGRRIILSDTVGFISDLPTELIAAFRATLEEVAEA 289
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS----EEKLKNMIEVWNKIDY 424
D+++HV D + P+ R V VL+ + S ++ + +IEV NK D
Sbjct: 290 DVILHVRDISHPDSAAQRADVEDVLEGMAGSGTLEDDWRRRVIEVQNKADL 340
>gi|424890490|ref|ZP_18314089.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393172708|gb|EJC72753.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 468
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/369 (40%), Positives = 208/369 (56%), Gaps = 50/369 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLALAI--------DLDVVNGQVVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK +N +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLNERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGDVEY 434
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEADKRLIEVWNKIDRLEPEVHDAMV 340
Query: 435 IDGDDISNF 443
SN
Sbjct: 341 QKSSGASNV 349
>gi|421602666|ref|ZP_16045219.1| GTP-binding protein HFLX [Bradyrhizobium sp. CCGE-LA001]
gi|404265222|gb|EJZ30349.1| GTP-binding protein HFLX [Bradyrhizobium sp. CCGE-LA001]
Length = 415
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/304 (45%), Positives = 188/304 (61%), Gaps = 27/304 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I I E ++ + ++ L+ IQQRNLE+ VLDR GLI+
Sbjct: 34 RPATYIGKGKVEEIAGLIKSLE----VELVVMDCALAPIQQRNLEKELHAKVLDRTGLIL 89
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 90 EIFGRRAKTREGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 132
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER S L S++++V+ TR + RA R+R VA+VG
Sbjct: 133 FMGGPGETQIEADRRLIQERISKLESELKKVQATRRLHRAGRQRVP------YRVVALVG 186
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP QLV
Sbjct: 187 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLV 246
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EAD+++HV D + + E ++ V VL+Q+G++ + +IEVWNKID
Sbjct: 247 AAFRATLEEVLEADVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDR 306
Query: 425 HDEE 428
+D E
Sbjct: 307 YDAE 310
>gi|254469962|ref|ZP_05083367.1| GTP-binding proten HflX [Pseudovibrio sp. JE062]
gi|211961797|gb|EEA96992.1| GTP-binding proten HflX [Pseudovibrio sp. JE062]
Length = 491
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 204/352 (57%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
QA+L EA+ LA ++E + +V + ++ + + FG G VE
Sbjct: 63 QARLEEAVGLAAAIELE------------------IVSSSLVRLANVKPGSLFGSGKVEE 104
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I+ I E ++ + V+ L+ IQQRNLER W V+DR GLI+EIF A TKE +
Sbjct: 105 IRGQIEIEE----IELVVVDHPLTPIQQRNLERDWNTKVIDRTGLILEIFGERAQTKEGR 160
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L ++KSRLVR T E R GG GF+ G GET+++
Sbjct: 161 LQVELAHLTWQKSRLVR------SWTHLE-----------RQRGGLGFVGGPGETQIEAD 203
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR I +R + L Q+E+V+RTR + R R++ H +A VGYTNAGKSTL +
Sbjct: 204 RRIIQDRITLLKGQLEQVQRTRKLHRKQRKKVPH--------PVIAFVGYTNAGKSTLFN 255
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++++++F+ LFATLDP L+ + LP GR+V+LSDTVGFIS+LP LV AF ATLEEV+
Sbjct: 256 RMTNAEVFAKDLLFATLDPTLRRLKLPHGREVILSDTVGFISELPHNLVAAFRATLEEVI 315
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+AD+++HV D + + V + L+ +G+ + +IEV+NKID DE
Sbjct: 316 QADIVLHVRDIAHEDTKAQSLDVNETLEMLGLKVSESDRVIEVYNKIDKLDE 367
>gi|424910276|ref|ZP_18333653.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392846307|gb|EJA98829.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 468
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 216/398 (54%), Gaps = 62/398 (15%)
Query: 42 KDKDDLHDVV---TLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEA--LCLANSLEEQRD 96
K +DD+ VV L RD D L R ++AKL EA L LA LE
Sbjct: 21 KHRDDMRAVVLVPVLKQRDTRDAAALPAAAGR-----SVEAKLEEAKGLALAIDLE---- 71
Query: 97 GYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFV 156
V Q + + R T FG G +E I H+ + G + V
Sbjct: 72 ----------------VTQGLIVAVNQPRPATLFGTGKIEEI-GHLLDETNSG---LVIV 111
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR
Sbjct: 112 DHPLTPVQQRNLEKHWNAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR-- 169
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
T E R GG GF+ G GET+++ RR + ER L ++E+V
Sbjct: 170 ----SWTHLE-----------RQRGGAGFMGGPGETQIEADRRLLQERIVKLERELEQVV 214
Query: 277 RTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDP 334
RTR + RA RR+ H VA+VGYTNAGKSTL + ++ + + ++ LFATLDP
Sbjct: 215 RTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDP 266
Query: 335 RLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEH 394
L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+EADL++HV D + P+
Sbjct: 267 TLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDMSDPDNAAQ 326
Query: 395 RTTVLQVLQQVGVSEEKLKN-MIEVWNKIDYHDEEMGD 431
VL++L +G+ E++ ++ +IEVWNK+D D E D
Sbjct: 327 SADVLRILGDLGIDEKEAEHRIIEVWNKVDRLDPEAHD 364
>gi|424870516|ref|ZP_18294178.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393166217|gb|EJC66264.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 441
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 50/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D + + + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLNVVNGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLER W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEREWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 431
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEAEKRLIEVWNKIDRLEPEVHD 337
>gi|254294018|ref|YP_003060041.1| GTP-binding proten HflX [Hirschia baltica ATCC 49814]
gi|254042549|gb|ACT59344.1| GTP-binding proten HflX [Hirschia baltica ATCC 49814]
Length = 445
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 178/305 (58%), Gaps = 34/305 (11%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K A FG G ++ I ++ E + + V+ LS IQQRNLE V+DR GL
Sbjct: 58 KPNAAKLFGAGQLDLISERLDDCEG----NLLVVDCSLSPIQQRNLENTLNVKVMDRTGL 113
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A + E +LQ E+A +Y++SRLVR T E R GG
Sbjct: 114 ILEIFGVRARSAEGRLQVEMARQLYERSRLVRT------WTHLE-----------RQRGG 156
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
GF++G GE++L+ RR + R + L S +E VRRTR +QRA R+R RG VA+
Sbjct: 157 TGFLAGPGESQLEADRRMLDGRIAKLKSDLEAVRRTRRLQRAGRKR------RGAPIVAL 210
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL ++L+ S +F+ FATLDP + V L SG+K+ + DTVGFI+DLP
Sbjct: 211 AGYTNAGKSTLFNSLTHSSVFAADMPFATLDPTARDVELSSGKKISMIDTVGFITDLPTH 270
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN----MIEV 418
L+++F AT+EE +EADLL+HV D + P + + V VL ++ E+ L +IEV
Sbjct: 271 LIESFRATIEEAIEADLLLHVRDISHPETDRQSSDVNDVLTKL---EQDLNADRPPVIEV 327
Query: 419 WNKID 423
WNK D
Sbjct: 328 WNKSD 332
>gi|110633964|ref|YP_674172.1| HSR1-like GTP-binding protein [Chelativorans sp. BNC1]
gi|110284948|gb|ABG63007.1| GTP-binding protein, HSR1-related protein [Chelativorans sp. BNC1]
Length = 460
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 211/395 (53%), Gaps = 57/395 (14%)
Query: 74 PTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPG 133
P QAKL+EA+ LA +++ + ++FF P R T G G
Sbjct: 51 PLSPQAKLDEAVGLAEAIDLE---ITHSEFFTVAQP---------------RPATLIGAG 92
Query: 134 TVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHT 193
V+ + + AE+ EL + ++ L+ +QQRNLER VLDR GLI+EIF A T
Sbjct: 93 KVKDLANIV--AETGAEL--VIIDHQLTPVQQRNLERELKAKVLDRTGLILEIFGRRART 148
Query: 194 KEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETE 253
KE +LQ +LA L Y++ RLVR T E R GG GF+ G GET+
Sbjct: 149 KEGRLQVDLAHLEYQRGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQ 191
Query: 254 LQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTL 313
++ RR + ER + ++E VRRTR + R RR+ VA+VGYTNAGKSTL
Sbjct: 192 IEADRRLLQERIIRIKRELETVRRTRDLHRTKRRKVP------FPIVAIVGYTNAGKSTL 245
Query: 314 VSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEE 373
+ L+ + + ++ LFATLDP L+ V P G V+LSDTVGFISDLP LV AF ATLEE
Sbjct: 246 FNRLTGASVLAEDMLFATLDPTLRRVRFPHGTVVILSDTVGFISDLPPHLVAAFRATLEE 305
Query: 374 VVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVE 433
VVEAD+++H+ D + P+ H V QVL +GV +EVWNKID E D E
Sbjct: 306 VVEADVILHLRDISDPDTAAHARDVEQVLASLGVDTSDPARAVEVWNKIDRLSE--ADRE 363
Query: 434 YIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDD 468
+ DDI+ + P+ + I G +D
Sbjct: 364 RLLRDDINK----------TAPIAISAITGEGIED 388
>gi|338732604|ref|YP_004671077.1| GTP-binding protein hflX [Simkania negevensis Z]
gi|336481987|emb|CCB88586.1| GTP-binding protein hflX [Simkania negevensis Z]
Length = 435
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/312 (40%), Positives = 183/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV +NP K A T+ G G +E ++ A + + D + + +S QQRNLE+
Sbjct: 54 VVSKNPC-PLRKIEASTYIGKGKIEELQ----AAADESKADVVIFDDEISPNQQRNLEKI 108
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
+ +PV+DR LI+EIF+ A T+EAKLQ ELA Y+ RL R+ R
Sbjct: 109 FKRPVIDRTELILEIFSQRAQTREAKLQVELAKSHYQLPRLKRLWTHLSR---------- 158
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+ + G+GF+ GAGE +++L RR + +R S L ++IEEVR R VQR AR R
Sbjct: 159 ------QVASGKGFLKGAGERQIELDRRMVRDRISRLKNEIEEVRHQRDVQRHARIR--- 209
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
G+ T A++GYTN GKSTL+ AL+ +++ + +LFATLD + LP+ +++LL D
Sbjct: 210 ---SGVPTFAIIGYTNVGKSTLLHALTQAEVLIEDKLFATLDTTTRKFTLPNHQEILLID 266
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +P LV AF +TLEE + D+L+H++D P EEH + +VL+++G
Sbjct: 267 TVGFIRKIPHTLVAAFKSTLEEAMYTDILLHLVDINHPLAEEHAESTYEVLKELGAEG-- 324
Query: 412 LKNMIEVWNKID 423
K MI V NKID
Sbjct: 325 -KPMITVLNKID 335
>gi|83952201|ref|ZP_00960933.1| GTP-binding protein HflX [Roseovarius nubinhibens ISM]
gi|83837207|gb|EAP76504.1| GTP-binding protein HflX [Roseovarius nubinhibens ISM]
Length = 425
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 191/322 (59%), Gaps = 30/322 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV + ++ K FG G +E +K + E+D + ++ ++ +QQRN
Sbjct: 41 LPGLDVVGSEIVRLPKPHPGALFGSGKIEELKARLEA----NEVDLVLIDGPVTPVQQRN 96
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 97 LEKAWGLKLLDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHLE- 149
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I ++ L Q+E+V +TR + RAAR
Sbjct: 150 ----------RQRGGLGFVGGPGETQIEADRRAIDDQLVRLRRQLEKVVKTRTLHRAARA 199
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRK 346
+ VA+VGYTNAGKSTL + L+ SD+ + LFATLDP ++ V LP G
Sbjct: 200 KV------PFPIVALVGYTNAGKSTLFNRLTGSDVMAKDMLFATLDPTMRKVSLPHGGPD 253
Query: 347 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 406
V+LSDTVGFISDLP +LV AF ATLEEVV ADL+VHV D + P EE V +L+ +
Sbjct: 254 VILSDTVGFISDLPTELVAAFRATLEEVVSADLVVHVRDISHPETEEQARDVEAILESLD 313
Query: 407 VSEEKLKNMIEVWNKIDYHDEE 428
V+E + IE+WNK D D E
Sbjct: 314 VAEGTPR--IELWNKADLLDPE 333
>gi|395766305|ref|ZP_10446875.1| GTP-binding protein HflX [Bartonella sp. DB5-6]
gi|395408956|gb|EJF75559.1| GTP-binding protein HflX [Bartonella sp. DB5-6]
Length = 447
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 146/395 (36%), Positives = 206/395 (52%), Gaps = 45/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T G G V+ + +I S+ ++ ++ L+ +QQRNLE+ W
Sbjct: 60 VVHYETVNIAALRPATLLGKGKVDALAHYI----SEYSIELAVIDYFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRAQTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRILQEKIIRIRRELETVIKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTN GKSTL + L+ +D+ + LFATLDP L+ VVLP G+ +LL DT
Sbjct: 219 ------VVALVGYTNTGKSTLFNNLTRADVLAKDMLFATLDPTLRKVVLPHGKTILLFDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEVVEA L++HV D + H VL+VL +G++ +
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVVEASLILHVRDMADVDHYTHAKDVLEVLLSLGINVDDT 332
Query: 413 KNMIEVWNKIDYHDEEMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVD 457
+++IEVWNKID DE + V + D + A +K + +
Sbjct: 333 EHIIEVWNKIDLLDEHALNVLQTSAKTQLNPAVMVSALMSDGLDQLLIAIEKRIFGKMQN 392
Query: 458 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 492
VECI + D F E+ GE M + H+D S
Sbjct: 393 VECI--LRPHEMSLIDWF-YENSGEIMQEGHDDGS 424
>gi|119386828|ref|YP_917883.1| small GTP-binding protein [Paracoccus denitrificans PD1222]
gi|119377423|gb|ABL72187.1| GTP-binding protein HflX [Paracoccus denitrificans PD1222]
Length = 435
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/378 (38%), Positives = 207/378 (54%), Gaps = 50/378 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G E I H+ A + + + ++ ++ +QQRNLE+ WG +LDR GLI+EIF
Sbjct: 65 LFSKGKREEIGQHLEAAAAGEGAELVLIDGPVTPVQQRNLEKEWGVKILDRTGLILEIFA 124
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E LQ ELAAL Y+++RLVR T E R GG GF+ G
Sbjct: 125 DRAQTREGVLQVELAALAYQRTRLVRA------WTHLE-----------RQRGGLGFVGG 167
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+++ RR I E+ L Q+E V +TR + R AR + VA+VGYTNA
Sbjct: 168 PGETQIEADRRAIDEQVVRLRRQLERVVKTRELHRKARAKVP------YPIVALVGYTNA 221
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ +++ + +LFATLDP ++ + LP GR+V+LSDTVGFISDLP +LV AF
Sbjct: 222 GKSTLFNRLTGAEVLAQDQLFATLDPTMRQLTLPGGRRVILSDTVGFISDLPHELVAAFR 281
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
ATLEEV+ ADL++HV D + P EE V ++L +GV E+ +IEVWNKID
Sbjct: 282 ATLEEVLAADLILHVRDISHPETEEQAGDVGEILDSLGVEED--VPLIEVWNKIDA---- 335
Query: 429 MGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMNKNH 488
+S +RA + T + V+ I G+ D + L E +++
Sbjct: 336 -----------LSPETRAALQRTDARTQGVQAISALSGEGLDTLLAAIEARLAEVLDEPR 384
Query: 489 ND------YSDG----WL 496
+ +SDG WL
Sbjct: 385 REAELVLPHSDGRRRAWL 402
>gi|374331616|ref|YP_005081800.1| GTP-binding protein HSR1 [Pseudovibrio sp. FO-BEG1]
gi|359344404|gb|AEV37778.1| GTP-binding protein HSR1 [Pseudovibrio sp. FO-BEG1]
Length = 491
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 204/352 (57%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
QA+L EA+ LA ++E + +V + ++ + + FG G VE
Sbjct: 63 QARLEEAVGLAAAIELE------------------IVSSGLVRLANVKPGSLFGSGKVEE 104
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I+ I E ++ + V+ L+ IQQRNLER W V+DR GLI+EIF A TKE +
Sbjct: 105 IRGQIEIEE----IELVVVDHPLTPIQQRNLERDWNTKVIDRTGLILEIFGERAQTKEGR 160
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L ++KSRLVR T E R GG GF+ G GET+++
Sbjct: 161 LQVELAHLTWQKSRLVR------SWTHLE-----------RQRGGLGFVGGPGETQIEAD 203
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR I +R + L Q+E+V+RTR + R R++ H +A VGYTNAGKSTL +
Sbjct: 204 RRIIQDRITLLKGQLEQVQRTRKLHRKQRKKVPH--------PVIAFVGYTNAGKSTLFN 255
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++++++F+ LFATLDP L+ + LP GR+V+LSDTVGFIS+LP LV AF ATLEEV+
Sbjct: 256 RMTNAEVFAKDLLFATLDPTLRRLKLPHGREVILSDTVGFISELPHNLVAAFRATLEEVI 315
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+AD+++HV D + + V + L+ +G+ + +IEV+NKID DE
Sbjct: 316 QADIVLHVRDIAHEDTKAQSLDVNETLEMLGLKVSESDRVIEVYNKIDKLDE 367
>gi|340776466|ref|ZP_08696409.1| GTP-binding protein hflX [Acetobacter aceti NBRC 14818]
Length = 439
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 201/336 (59%), Gaps = 39/336 (11%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G VE+++ A ++ E+ + ++A LS QQRNLE+A G V+DR GLI+
Sbjct: 63 RPATLLGTGQVESLR----EAVAEKEIKVVVIDAKLSPGQQRNLEKALGCKVIDRTGLIL 118
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
+IF A A T+E LQ ELA L Y++SRLVR+ T E R GG G
Sbjct: 119 DIFGARAATREGSLQVELAHLEYQRSRLVRL------WTHLE-----------RQRGGFG 161
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R L ++E+VRRTR + R+AR+R VA+VG
Sbjct: 162 FLGGPGETQIEADRRIIGDRIVRLKRELEQVRRTRGLHRSARKR------VPFPVVALVG 215
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL +AL+ + +++ +LFATLDP ++++ LPSGR+V+LSDTVGFISDLP +L+
Sbjct: 216 YTNAGKSTLFNALTGASVYAQDQLFATLDPTMRAIRLPSGRQVILSDTVGFISDLPTELI 275
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV---GVSEEKLKN-MIEVWN 420
AF ATLEEV EAD+++HV D P+ R+ VL VL + G+ + + ++ +IEV N
Sbjct: 276 AAFRATLEEVAEADIILHVRDIAHPDTAAQRSDVLSVLSGMERDGMLDHEWRSRVIEVLN 335
Query: 421 KIDY--------HDEEMGDVEYIDGDDISNFSRAED 448
K D H + I GD + A D
Sbjct: 336 KADLLGGPEQVEHHGTAVPISAITGDGLPELMAAID 371
>gi|421589086|ref|ZP_16034283.1| GTP-binding protein, partial [Rhizobium sp. Pop5]
gi|403706055|gb|EJZ21445.1| GTP-binding protein, partial [Rhizobium sp. Pop5]
Length = 403
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 206/357 (57%), Gaps = 50/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGQVVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRLLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 431
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEAGKRLIEVWNKIDRLEPEVHD 337
>gi|162148045|ref|YP_001602506.1| GTP-binding protein hflX [Gluconacetobacter diazotrophicus PAl 5]
gi|161786622|emb|CAP56204.1| GTP-binding protein hflX [Gluconacetobacter diazotrophicus PAl 5]
Length = 428
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 202/351 (57%), Gaps = 49/351 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA S+ V+V+ L R T G G VE+
Sbjct: 27 EARLEEAVGLAASI------------------GLVIVRQAVLVLRARRPSTLLGNGQVES 68
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
++ + + + + V++ LS +QQRNLERA G V+DR LI++IF A TKE
Sbjct: 69 LRAAVQ----QDRVAVVIVDSRLSPVQQRNLERALGCKVIDRTALILDIFGERAATKEGT 124
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 125 LQVELAHLEYQRSRLVRT------WTHLE-----------RQRGGFGFLGGPGETQIEAD 167
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I +R L ++E+VRRTR + RAARRR VA+VGYTNAGKSTL +AL
Sbjct: 168 RRMIGDRIVRLKRELEQVRRTRGLHRAARRRVP------FPVVALVGYTNAGKSTLFNAL 221
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ + +F+ +LFATLDP ++ + LPSGR+++LSDTVGFISDLP +L+ AF ATLEEV EA
Sbjct: 222 TGATVFAQDQLFATLDPTMRGIRLPSGRRIILSDTVGFISDLPTELIAAFRATLEEVAEA 281
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS----EEKLKNMIEVWNKIDY 424
D+++HV D + P+ R V VL+ + S ++ + +IEV NK D
Sbjct: 282 DVILHVRDISHPDSAAQRADVEDVLEGMAGSGTLEDDWRRRVIEVQNKADL 332
>gi|89054736|ref|YP_510187.1| HSR1-like GTP-binding protein [Jannaschia sp. CCS1]
gi|88864285|gb|ABD55162.1| GTP-binding protein HflX [Jannaschia sp. CCS1]
Length = 435
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 194/331 (58%), Gaps = 29/331 (8%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV ++ +A+ FG G ++ + I + + + ++ ++ +QQRN
Sbjct: 52 LPDLEVVDAQVVRLPRAQPGLLFGSGKIQELHDLIEALD----IGLVLIDGPVTPVQQRN 107
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LER WG +LDR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 108 LEREWGCKLLDRTGLILEIFADRAATREGVLQVELAALSYQRTRLVRA------WTHLE- 160
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E + + Q+ +V +TRA+ R+AR
Sbjct: 161 ----------RQRGGLGFVGGPGETQIEADRRAIDEAVTRIKRQLAKVVKTRALHRSARA 210
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKV 347
+ VA+VGYTNAGKSTL + L+ +D+ + LFATLDP +++V LP G V
Sbjct: 211 KVP------YPIVALVGYTNAGKSTLFNRLTGADVMAKDMLFATLDPTMRAVTLPDGTDV 264
Query: 348 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 407
+LSDTVGFISDLP QLV AF ATLEEV++ADL+VHV D + P E V +L +GV
Sbjct: 265 ILSDTVGFISDLPTQLVAAFRATLEEVLDADLIVHVRDISHPQTVEQAEDVHAILGDLGV 324
Query: 408 SEEKLKNMIEVWNKIDYHDEEMGDVEYIDGD 438
S++ + +EVWNK+D DE ++ D
Sbjct: 325 SDQSAQ--LEVWNKVDLLDEAAQTARQVEAD 353
>gi|254486973|ref|ZP_05100178.1| GTP-binding proten HflX [Roseobacter sp. GAI101]
gi|214043842|gb|EEB84480.1| GTP-binding proten HflX [Roseobacter sp. GAI101]
Length = 412
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/298 (44%), Positives = 183/298 (61%), Gaps = 29/298 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A FG G +E +K AE ++ + V+ ++ +QQRNLE+AWG +LDR GLI+E
Sbjct: 47 AGMLFGSGKIEELKQKFEAAE----VELVLVDGAVTPVQQRNLEKAWGVKLLDRTGLILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF+ A T+E LQ E+AAL Y+++RLVR T E R GG GF
Sbjct: 103 IFSDRAATREGVLQVEMAALNYQRTRLVRA------WTHLE-----------RQRGGLGF 145
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+++ RR I E+ L Q+++V +TRA+ RAAR + VA+VGY
Sbjct: 146 VGGPGETQIESDRRAIDEQLVRLRRQLDKVVKTRALHRAARAKVP------YPIVALVGY 199
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ +D+ + LFATLDP ++S+VLP G +++LSDTVGFISDLP +LV
Sbjct: 200 TNAGKSTLFNRLTGADVMAKDMLFATLDPTMRSLVLPDGPEIILSDTVGFISDLPTELVA 259
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATLEEV+ AD++ HV D + EE V +L +GV +E EVWNK+D
Sbjct: 260 AFRATLEEVLAADIICHVRDISHAETEEQAQNVRDILASLGVPKE--TRSFEVWNKLD 315
>gi|299133863|ref|ZP_07027057.1| GTP-binding proten HflX [Afipia sp. 1NLS2]
gi|298591699|gb|EFI51900.1| GTP-binding proten HflX [Afipia sp. 1NLS2]
Length = 464
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 201/351 (57%), Gaps = 45/351 (12%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
QA+L+EA+ LA +++ VVV+ + R T+ G G VE
Sbjct: 54 QARLDEAVGLARAID------------------LVVVEALIAPLSEIRPATYLGTGKVEE 95
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I I E++ + ++ LS IQQRNLE+ W VLDR GLI+EIF A T+E
Sbjct: 96 ILGLIKA----HEVELVVMDCALSPIQQRNLEKEWNVKVLDRTGLILEIFGRRAKTREGT 151
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L+Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 152 LQVELAHLIYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEAD 194
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + + + +++V+ TR + RA R+R VA+VGYTNAGKSTL + L
Sbjct: 195 RRMIGERITRIENDLKKVQATRRLHRAGRQRVP------YRVVALVGYTNAGKSTLFNRL 248
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ +D+ + LFATLDP L+++ LP G K ++SDTVGFISDLP LV AF ATLEEV+EA
Sbjct: 249 TRADVQAADMLFATLDPTLRALKLPHGGKAMISDTVGFISDLPTMLVAAFRATLEEVIEA 308
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
D+++HV D + + E V QVL+Q+ + + +IEVWNKID E
Sbjct: 309 DVILHVRDISHEDAEAQERDVDQVLRQLNIDTDSGHRLIEVWNKIDRFSPE 359
>gi|319405766|emb|CBI79389.1| GTP-binding protein HflX [Bartonella sp. AR 15-3]
Length = 444
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/316 (41%), Positives = 186/316 (58%), Gaps = 27/316 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V+ + + + T F G V +IN + ++ V+ L+ +QQRNLE+ W
Sbjct: 61 VIHYEIINIARPCSSTLFKIGKVNEFAHYIN----EHQIMLSIVDHFLTPVQQRNLEKLW 116
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 117 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE------ 164
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + + + ++E V +TRA+ RA R++
Sbjct: 165 -----RQRGGSGFLGGPGETQIEADRRLLQNKIISIRRELETVVKTRALHRAKRKKIPH- 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+A+VGYTNAGKSTL + LS+S++ + LFATLDP L+ +VLP G+ VLLSDT
Sbjct: 219 -----PVIALVGYTNAGKSTLFNRLSNSNVLAKNMLFATLDPTLRKIVLPHGQTVLLSDT 273
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEV+EADL++HV D + P+ H V+++L +G+ +
Sbjct: 274 VGFISNLPTHLIAAFRATLEEVIEADLILHVRDASDPDHHAHAQDVVEILSSLGIDINNI 333
Query: 413 KNMIEVWNKIDYHDEE 428
+++E+WNKID D+
Sbjct: 334 DHIVEIWNKIDMLDQH 349
>gi|383771935|ref|YP_005451000.1| GTP-binding protein HFLX [Bradyrhizobium sp. S23321]
gi|381360058|dbj|BAL76888.1| GTP-binding protein HFLX [Bradyrhizobium sp. S23321]
Length = 465
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/304 (45%), Positives = 187/304 (61%), Gaps = 27/304 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I + ++ + ++ L+ IQQRNLE+ VLDR GLI+
Sbjct: 85 RPATYIGKGKVEEIAALARSLD----VELVVMDCALAPIQQRNLEKELNTKVLDRTGLIL 140
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y++SRLVR T E R GG G
Sbjct: 141 EIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 183
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER S L S++++V+ TR + RA R+R VA+VG
Sbjct: 184 FMGGPGETQIEADRRLIQERISKLESELKKVQATRRLHRAGRQR------VPYRVVALVG 237
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP QLV
Sbjct: 238 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALSLPHGGKAMLSDTVGFISNLPTQLV 297
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EAD+++HV D + + E ++ V VL+Q+G++ + +IEVWNKID
Sbjct: 298 AAFRATLEEVLEADVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDR 357
Query: 425 HDEE 428
+D E
Sbjct: 358 YDAE 361
>gi|337741152|ref|YP_004632880.1| GTP-binding protein HflX [Oligotropha carboxidovorans OM5]
gi|386030168|ref|YP_005950943.1| GTP-binding protein HflX [Oligotropha carboxidovorans OM4]
gi|336095236|gb|AEI03062.1| GTP-binding protein HflX [Oligotropha carboxidovorans OM4]
gi|336098816|gb|AEI06639.1| GTP-binding protein HflX [Oligotropha carboxidovorans OM5]
Length = 463
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 183/304 (60%), Gaps = 27/304 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I I ++D + ++ LS IQQRNLE+ W VLDR GLI+
Sbjct: 84 RPATYLGKGKVEDILGLIKA----HDVDLVVMDCALSPIQQRNLEKEWNAKVLDRTGLIL 139
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L+Y++SRLVR T E R GG G
Sbjct: 140 EIFGRRAKTREGTLQVELAHLIYQRSRLVR------SWTHLE-----------RQRGGFG 182
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER + + + +++V+ TR + RA R+R VA+VG
Sbjct: 183 FMGGPGETQIEADRRMIGERITRIENDLKKVQATRRLHRAGRKRVP------YRVVALVG 236
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K ++SDTVGFISDLP LV
Sbjct: 237 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALRLPHGGKAMISDTVGFISDLPTMLV 296
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EAD+++HV D + + E V VL+Q+G+ E +IEVWNKID
Sbjct: 297 AAFRATLEEVIEADVILHVRDISHEDAEAQERDVDHVLRQLGIGTESGHRIIEVWNKIDC 356
Query: 425 HDEE 428
E
Sbjct: 357 FSPE 360
>gi|209885224|ref|YP_002289081.1| GTP-binding proten HflX [Oligotropha carboxidovorans OM5]
gi|209873420|gb|ACI93216.1| GTP-binding proten HflX [Oligotropha carboxidovorans OM5]
Length = 437
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 183/304 (60%), Gaps = 27/304 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I I ++D + ++ LS IQQRNLE+ W VLDR GLI+
Sbjct: 58 RPATYLGKGKVEDILGLIKA----HDVDLVVMDCALSPIQQRNLEKEWNAKVLDRTGLIL 113
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L+Y++SRLVR T E R GG G
Sbjct: 114 EIFGRRAKTREGTLQVELAHLIYQRSRLVR------SWTHLE-----------RQRGGFG 156
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER + + + +++V+ TR + RA R+R VA+VG
Sbjct: 157 FMGGPGETQIEADRRMIGERITRIENDLKKVQATRRLHRAGRKRVP------YRVVALVG 210
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K ++SDTVGFISDLP LV
Sbjct: 211 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALRLPHGGKAMISDTVGFISDLPTMLV 270
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EAD+++HV D + + E V VL+Q+G+ E +IEVWNKID
Sbjct: 271 AAFRATLEEVIEADVILHVRDISHEDAEAQERDVDHVLRQLGIGTESGHRIIEVWNKIDC 330
Query: 425 HDEE 428
E
Sbjct: 331 FSPE 334
>gi|339503334|ref|YP_004690754.1| GTP-binding protein HflX [Roseobacter litoralis Och 149]
gi|338757327|gb|AEI93791.1| GTP-binding protein HflX [Roseobacter litoralis Och 149]
Length = 432
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 195/326 (59%), Gaps = 29/326 (8%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
+ LP VV + + RA FG G ++ IK ++ E ++ + V+ +S +QQ
Sbjct: 47 RALPELEVVGSEIVPLKTVRAGMLFGSGKIDQIKTTLHDEE----VELVLVDGAVSPVQQ 102
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 103 RNLEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHL 156
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I ++ + L Q+E+V +TRA+ RAA
Sbjct: 157 E-----------RQRGGLGFVGGPGETQIEADRRAIDDQLTRLRRQLEKVVKTRALHRAA 205
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGR 345
R + +A+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ + LP G
Sbjct: 206 RAKIP------YPIIALVGYTNAGKSTLFNHLTGADVMAKDMLFATLDPTMRRLRLPDGP 259
Query: 346 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 405
+V+LSDTVGFIS+LP +LV AF ATLEEV+ AD++ HV D + P + V ++ +
Sbjct: 260 EVILSDTVGFISELPTELVAAFRATLEEVLAADVICHVRDISHPETDAQAKDVQDIMTTL 319
Query: 406 GVSEEKLKNMIEVWNKIDYHDEEMGD 431
GV ++ + E+WNK+D EE D
Sbjct: 320 GVEDD--RPAFEIWNKLDLLSEEDAD 343
>gi|319404324|emb|CBI77919.1| GTP-binding protein HflX [Bartonella rochalimae ATCC BAA-1498]
Length = 448
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 183/316 (57%), Gaps = 27/316 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + T F G +IN + + V+ L+ +QQRNLE+ W
Sbjct: 61 VVHYEIINIAKPCSSTLFRIGKANEFAHYIN----EHHIMLSIVDHFLTPVQQRNLEKLW 116
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 117 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE------ 164
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + + + ++E V +TRA+ RA R+R
Sbjct: 165 -----RQRGGTGFLGGPGETQIEADRRLLQNKIISIRRELETVVKTRALHRAKRKRIPHP 219
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+A+VGYTNAGKSTL + LSDS++ ++ LFATLDP L+ +VLP G+ VLLSDT
Sbjct: 220 ------VIALVGYTNAGKSTLFNHLSDSNVLAEDMLFATLDPTLRKIVLPHGQTVLLSDT 273
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP L+ AF ATLEEV+EADL++HV D + P+ H V ++L +GV
Sbjct: 274 VGFISNLPTHLIAAFRATLEEVIEADLILHVRDVSDPDHYAHAQDVFEILSDLGVDINDT 333
Query: 413 KNMIEVWNKIDYHDEE 428
+++E+WNKID D+
Sbjct: 334 DHIVEIWNKIDTLDQH 349
>gi|126726836|ref|ZP_01742675.1| Putative GTP-binding protein [Rhodobacterales bacterium HTCC2150]
gi|126703794|gb|EBA02888.1| Putative GTP-binding protein [Rhodobacterales bacterium HTCC2150]
Length = 390
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/323 (41%), Positives = 190/323 (58%), Gaps = 29/323 (8%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
+ LP V+ N ++ KA+ T FG G +E +K AE ++ + ++ +S +QQ
Sbjct: 5 RALPQLDVLGNTHVRLPKAQPGTLFGKGKIEELKGMFKAAE----VELVVIDGPVSPVQQ 60
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+ W +LDR GLI+EIF+ A T+E LQ E+AAL Y+K+RLVR T
Sbjct: 61 RNLEKEWNVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQKTRLVRA------WTHL 114
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR + E + Q+E+ +TR + RAA
Sbjct: 115 E-----------RQRGGLGFVGGPGETQIESDRRALDEAIIRIRRQLEKTVKTRELHRAA 163
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGR 345
R++ VA+VGYTNAGKST + L+ + +F+ LFATLDP +++V LP+G
Sbjct: 164 RKKVP------YPVVALVGYTNAGKSTFFNHLTGAKVFAKDMLFATLDPTMRAVNLPNGL 217
Query: 346 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 405
V+LSDTVGFISDLP +LV AF ATLE+ + ADL++HV D P E V +L +
Sbjct: 218 DVILSDTVGFISDLPTELVAAFRATLEDALSADLILHVRDIAHPETESQAGNVRTILSSL 277
Query: 406 GVSEEKLKNMIEVWNKIDYHDEE 428
G+ E + IE+WNK D +EE
Sbjct: 278 GIGHETPQ--IEIWNKTDLLNEE 298
>gi|407778947|ref|ZP_11126207.1| GTP-binding proten HflX [Nitratireductor pacificus pht-3B]
gi|407299231|gb|EKF18363.1| GTP-binding proten HflX [Nitratireductor pacificus pht-3B]
Length = 458
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 204/377 (54%), Gaps = 56/377 (14%)
Query: 63 RLFLVQPRLK-----------PPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPH 111
R F+V P L P +A+ EA+ LA +++ Q
Sbjct: 25 RAFVVSPVLAADRRAAESGTTPARSPEARSEEAVGLAEAIDLQ----------------- 67
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV + G R T G G ++ + + ++ E++ + ++ L+ +QQRNLE+A
Sbjct: 68 -VVSAEIIPVGTPRPATLIGTGKLDDLAARV----AEAEIEVVIIDHPLTPVQQRNLEKA 122
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
VLDR GLI+EIF A TKE +LQ ELA L Y++ RLVR T E
Sbjct: 123 LNAKVLDRTGLILEIFGRRARTKEGRLQVELAHLEYQRGRLVR------SWTHLE----- 171
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR + +R L ++E VRRTR + R+ RR+
Sbjct: 172 ------RQRGGGGFMGGPGETQIEADRRLLQDRIVRLKRELETVRRTRDLHRSKRRKVP- 224
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL + L+ + + ++ LFATLDP L+ V LP G ++LSD
Sbjct: 225 -----FPIVAIVGYTNAGKSTLFNRLTGAAVMAEDMLFATLDPTLRRVQLPHGTTIILSD 279
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFISDLP LV AF ATLEEV+EADL++H+ D + P V ++L +GV
Sbjct: 280 TVGFISDLPTHLVAAFRATLEEVIEADLVIHLRDISDPASSAQAADVEEILGDLGVDVAD 339
Query: 412 LKNMIEVWNKIDYHDEE 428
K+++EVWNKID D E
Sbjct: 340 KKHVLEVWNKIDNLDAE 356
>gi|418296235|ref|ZP_12908079.1| GTP-binding protein HFLX [Agrobacterium tumefaciens CCNWGS0286]
gi|355539667|gb|EHH08905.1| GTP-binding protein HFLX [Agrobacterium tumefaciens CCNWGS0286]
Length = 444
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 155/382 (40%), Positives = 207/382 (54%), Gaps = 62/382 (16%)
Query: 55 NRDPDDPPRLFLVQPRLKPPTFLQAKLNEA--LCLANSLEEQRDGYFDTDFFDKELPPHV 112
NRD P + P ++AKL EA L LA LE
Sbjct: 16 NRDAAAGP--------VAPGRSVEAKLEEAKGLALAIDLE-------------------- 47
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V Q + + R T FG G +E I ++ +S + V+ L+ +QQRNLE+ W
Sbjct: 48 VTQGLIVSVNQPRPATLFGTGKIEEIGHLLDETDS----GLVIVDHPLTPVQQRNLEKQW 103
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 104 NAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE------ 151
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + +R L ++E+V RTR + RA RR+ H
Sbjct: 152 -----RQRGGAGFMGGPGETQIEADRRLLQDRIVKLEKELEQVVRTRQLHRAKRRKVPH- 205
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LS
Sbjct: 206 -------PIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILS 258
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 409
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ VL++L +G+ E
Sbjct: 259 DTVGFISDLPTHLVAAFRATLEEVLEADLVLHVRDMSDPDNAAQSADVLRILGDLGIDEK 318
Query: 410 EKLKNMIEVWNKIDYHDEEMGD 431
E K +IEVWNK+D + E D
Sbjct: 319 EAEKRIIEVWNKVDRLEPEAHD 340
>gi|323136434|ref|ZP_08071516.1| GTP-binding proten HflX [Methylocystis sp. ATCC 49242]
gi|322398508|gb|EFY01028.1| GTP-binding proten HflX [Methylocystis sp. ATCC 49242]
Length = 444
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 200/353 (56%), Gaps = 49/353 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
A+L+EA+ LA ++ D D +V + S+ + R T+ G G V+
Sbjct: 38 HARLSEAVGLAQAI--------DLD----------IVGDISVSLNEVRPATYLGKGKVDE 79
Query: 138 IKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
I AE+ E +A + ++ LS +QQRNLE+AWG V+DR GLI+EIF A TKE
Sbjct: 80 I------AETVKEREAGLVSMDCQLSPVQQRNLEKAWGAKVIDRTGLILEIFGQRARTKE 133
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
LQ ELA L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 134 GALQVELAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIE 176
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR I ER + +++V+RTR + R RR VA+VGYTNAGKSTL +
Sbjct: 177 TDRRLIEERMRRIEQDLDKVKRTRGLHRKTRREVP------YPVVALVGYTNAGKSTLFN 230
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
L+ +++ + LFATLDP L+ + LP G +VLLSDTVGFISDLP LV AF ATLEEV
Sbjct: 231 RLTKAEVLAQDMLFATLDPTLRQIRLPHGARVLLSDTVGFISDLPTMLVSAFRATLEEVT 290
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
AD+++HV D + + E V +L ++G+ E ++EVWNKID D E
Sbjct: 291 LADVILHVRDVSHEDSEAQARDVETILDELGLKGEAEGRILEVWNKIDALDPE 343
>gi|418406935|ref|ZP_12980254.1| GTP-binding protein HFLX [Agrobacterium tumefaciens 5A]
gi|358007428|gb|EHJ99751.1| GTP-binding protein HFLX [Agrobacterium tumefaciens 5A]
Length = 444
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 152/366 (41%), Positives = 203/366 (55%), Gaps = 54/366 (14%)
Query: 71 LKPPTFLQAKLNEA--LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADT 128
+ P ++AKL EA L LA LE V Q + + R T
Sbjct: 24 VSPVRSVEAKLEEAKGLALAIDLE--------------------VTQGLVVPVNQPRPAT 63
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
FG G +E I H+ + G + V+ L+ +QQRNLE+ W V+DR GLI+EIF
Sbjct: 64 LFGTGKIEEI-GHLLDETNSG---LVIVDHPLTPVQQRNLEKQWNAKVIDRTGLILEIFG 119
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A TKE LQ +LA L Y+K RLVR T E R GG GF+ G
Sbjct: 120 RRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGAGFMGG 162
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYT 306
GET+++ RR + +R L ++E+V RTR + RA RR+ H VA+VGYT
Sbjct: 163 PGETQIEADRRLLQDRIVKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYT 214
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
NAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV A
Sbjct: 215 NAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAA 274
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYH 425
F ATLEEV+EADL++HV D + P+ VL++L +G+ E E K +IEVWNK+D
Sbjct: 275 FRATLEEVLEADLILHVRDMSDPDNAAQSADVLRILGDLGIDEKEAEKRIIEVWNKVDRL 334
Query: 426 DEEMGD 431
+ E D
Sbjct: 335 EPEAHD 340
>gi|409437317|ref|ZP_11264436.1| putative GTPase [Rhizobium mesoamericanum STM3625]
gi|408751041|emb|CCM75592.1| putative GTPase [Rhizobium mesoamericanum STM3625]
Length = 444
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 157/404 (38%), Positives = 222/404 (54%), Gaps = 57/404 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + + V V +P R T G G +E
Sbjct: 31 ESRLEEATGLAQAI--------DLDVVNGAI---VTVNDP-------RPATLMGTGKIEE 72
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 73 IKATLDANDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 128
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 129 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 171
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA R++ H VA+VGYTNAGKSTL +
Sbjct: 172 RRLLQDRIVKLERELEQVVRTRQLHRAKRKKVPH--------PIVALVGYTNAGKSTLFN 223
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 224 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 283
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL-KNMIEVWNKIDYHDEEMGDVEY 434
EADL++HV D + + + VL++L+ +G+ EE+ K +IEVWNKID + E D
Sbjct: 284 EADLILHVRDMSDVDNQAQSADVLRILKDLGIDEEEGDKRIIEVWNKIDRLEPEAHDA-- 341
Query: 435 IDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE 478
+ S AE+ S + E ID G+ + G ++E
Sbjct: 342 ----IVQKASGAENVVALS-AISGEGIDTLMGEISRRLSGVLTE 380
>gi|389691223|ref|ZP_10180116.1| GTP-binding protein HflX [Microvirga sp. WSM3557]
gi|388589466|gb|EIM29755.1| GTP-binding protein HflX [Microvirga sp. WSM3557]
Length = 464
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 184/311 (59%), Gaps = 27/311 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
++Q+ R TF G G VE + I AE G + ++ LS +QQRNLE+AW
Sbjct: 73 IIQSLIAPLASPRPATFIGSGKVEELAGLIR-AEDIG---LVVMDCALSPVQQRNLEKAW 128
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR GLI+EIF A T+E LQ ELA L Y+K RLVR T E
Sbjct: 129 GAKVIDRTGLILEIFGRRARTREGTLQVELAHLSYQKGRLVR------SWTHLE------ 176
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ER + + +E V +TR++ R +RRR
Sbjct: 177 -----RQRGGFGFLGGPGETQIEADRRLIQERMNRIERDLESVVKTRSLHRTSRRRVP-- 229
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+A+VGYTNAGKSTL + ++ +D+ ++ LFATLDP +++ LP G K +LSDT
Sbjct: 230 ----YPIIALVGYTNAGKSTLFNRMTQADVLAENMLFATLDPTSRAIELPHGEKAILSDT 285
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFISDLP LV AF ATLE+VVEAD+L+HV D + E V VL+++G+ +
Sbjct: 286 VGFISDLPTMLVAAFRATLEDVVEADVLLHVRDVSHGETEAQAGDVAVVLRELGIDPDDT 345
Query: 413 KNMIEVWNKID 423
+ ++EVWNK D
Sbjct: 346 RRVVEVWNKAD 356
>gi|110679965|ref|YP_682972.1| GTP-binding protein HflX [Roseobacter denitrificans OCh 114]
gi|109456081|gb|ABG32286.1| GTP-binding protein HflX, putative [Roseobacter denitrificans OCh
114]
Length = 432
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 157/409 (38%), Positives = 226/409 (55%), Gaps = 53/409 (12%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
+ LP VV + RA FG G ++ IK ++ E ++ + V+ +S +QQ
Sbjct: 47 RALPELEVVGADIVPLKTVRAGMLFGSGKIDEIKKSLHDEE----IELVLVDGPVSPVQQ 102
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 103 RNLEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHL 156
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I ++ + L Q+E+V +TRA+ RAA
Sbjct: 157 E-----------RQRGGLGFVGGPGETQIEADRRAIDDQLTRLRRQLEKVVKTRALHRAA 205
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGR 345
R + +A+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ + LP G
Sbjct: 206 RAKIP------YPIIALVGYTNAGKSTLFNHLTGADVMAKDMLFATLDPTMRRLRLPDGP 259
Query: 346 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 405
+V+LSDTVGFISDLP +LV AF ATLEEV+ AD++ HV D + P E V ++ +
Sbjct: 260 EVILSDTVGFISDLPTELVAAFRATLEEVLAADVICHVRDISHPETEAQAKDVQDIMTTL 319
Query: 406 GVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYG 465
GV E+ + E+WNK+D E G+ + +RA D+D + V I
Sbjct: 320 GVEED--RPTFELWNKLDLLSE---------GEADAMRARA-DRDPS-----VFAISALS 362
Query: 466 GDDADNNDGFVSEDL-GESMNKNHN-DYSDG----WLLSGDEQDNVEEE 508
G+ D V++ L G+ +S+G WL EQ+ VEEE
Sbjct: 363 GEGLDGLLAAVTQTLQGKKRAATLTLSFSEGRKRAWLF---EQELVEEE 408
>gi|159184763|ref|NP_354458.2| GTP-binding protein HFLX [Agrobacterium fabrum str. C58]
gi|159140051|gb|AAK87243.2| GTP-binding protein HFLX [Agrobacterium fabrum str. C58]
Length = 444
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 202/364 (55%), Gaps = 54/364 (14%)
Query: 73 PPTFLQAKLNEA--LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFF 130
P ++AKL EA L LA LE V Q + + R T F
Sbjct: 26 PGRSVEAKLEEAKGLALAIDLE--------------------VTQGLVVPVNQPRPATLF 65
Query: 131 GPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAH 190
G G +E I H+ + G + V+ L+ +QQRNLE+ W V+DR GLI+EIF
Sbjct: 66 GTGKIEEI-GHLLDETNSG---LVIVDHPLTPVQQRNLEKQWNAKVIDRTGLILEIFGRR 121
Query: 191 AHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAG 250
A TKE LQ +LA L Y+K RLVR T E R GG GF+ G G
Sbjct: 122 ASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGAGFMGGPG 164
Query: 251 ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNA 308
ET+++ RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNA
Sbjct: 165 ETQIEADRRLLQDRIVKLEKELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNA 216
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF
Sbjct: 217 GKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFR 276
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDE 427
ATLEEV+EADL++HV D + P+ VL++L +G+ E E K +IEVWNK+D +
Sbjct: 277 ATLEEVLEADLVLHVRDMSDPDNAAQSADVLRILGDLGIDEKEAEKRIIEVWNKVDRLEP 336
Query: 428 EMGD 431
E D
Sbjct: 337 EAHD 340
>gi|417860127|ref|ZP_12505183.1| GTP-binding protein HFLX [Agrobacterium tumefaciens F2]
gi|338823191|gb|EGP57159.1| GTP-binding protein HFLX [Agrobacterium tumefaciens F2]
Length = 474
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 188/320 (58%), Gaps = 28/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V Q + + R T FG G +E I ++ +S + V+ L+ +QQRNLE+ W
Sbjct: 78 VTQGLIVPVNQPRPATLFGTGKIEEIGHLLDETDS----GLVIVDHPLTPVQQRNLEKQW 133
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 134 NCKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE------ 181
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + +R L ++E+V RTR + RA RR+
Sbjct: 182 -----RQRGGAGFMGGPGETQIEADRRLLQDRIVKLEKELEQVVRTRQLHRAKRRKVPHP 236
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LSDT
Sbjct: 237 ------IVALVGYTNAGKSTLFNHITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDT 290
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EK 411
VGFISDLP LV AF ATLEEV+EADL++HV D + P+ VL++L +G+ E E
Sbjct: 291 VGFISDLPTHLVAAFRATLEEVLEADLVLHVRDMSDPDNAAQSADVLRILGDLGIDEKEA 350
Query: 412 LKNMIEVWNKIDYHDEEMGD 431
K +IEVWNK+D + E D
Sbjct: 351 EKRIIEVWNKVDRLEPEAHD 370
>gi|89068178|ref|ZP_01155588.1| GTP-binding protein HflX [Oceanicola granulosus HTCC2516]
gi|89046095|gb|EAR52153.1| GTP-binding protein HflX [Oceanicola granulosus HTCC2516]
Length = 430
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 183/295 (62%), Gaps = 29/295 (9%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
FG G + +K + E+ + + V+ +S +QQRNLE+ WG +LDR GLI+EIF+
Sbjct: 68 LFGTGKIAELKQRLKAEEA----ELVLVDGPVSPVQQRNLEKEWGVKLLDRTGLILEIFS 123
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E LQ E+AAL Y+++RLVR T E R GG GF+ G
Sbjct: 124 DRARTREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQRGGLGFVGG 166
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+++ RR I E+ + L Q+E+V +TR + RA+R + VA+VGYTNA
Sbjct: 167 PGETQIEADRRAIDEQLARLRKQLEKVVKTRTLHRASRAKVP------FPIVALVGYTNA 220
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ +++ + LFATLDP ++ V LPSG++V+LSDTVGFISDLP +LV AF
Sbjct: 221 GKSTLFNRLTGAEVMAKDMLFATLDPTMRKVELPSGQEVILSDTVGFISDLPTELVAAFR 280
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEEV++ADL++HV D EE V +L +GV E+ ++EVWNKID
Sbjct: 281 ATLEEVLDADLILHVRDVAHAETEEQAEDVRTILSGIGVGED--APLLEVWNKID 333
>gi|163852243|ref|YP_001640286.1| GTP-binding proten HflX [Methylobacterium extorquens PA1]
gi|218531002|ref|YP_002421818.1| GTP-binding proten HflX [Methylobacterium extorquens CM4]
gi|163663848|gb|ABY31215.1| GTP-binding proten HflX [Methylobacterium extorquens PA1]
gi|218523305|gb|ACK83890.1| GTP-binding proten HflX [Methylobacterium extorquens CM4]
Length = 471
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 197/350 (56%), Gaps = 46/350 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L+EA+ LA ++E D V +Q P R T+ G G VE
Sbjct: 54 EARLDEAVGLAAAIE-----------LDVTRAISVHIQRP-------RPSTYLGKGRVEE 95
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I I E + + ++ LS +QQRNLE+AWG V+DR GLI+EIF A T+E
Sbjct: 96 IAGLIKAEE----IGLVVMDCALSPVQQRNLEKAWGAKVIDRTGLILEIFGRRASTREGT 151
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ E A L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 152 LQVEHAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 194
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + + +E V RTR + R +R R VA+VGYTNAGKSTL +AL
Sbjct: 195 RRMIQERMTRIERDLEAVTRTRGLHRKSRARVP------YPIVALVGYTNAGKSTLFNAL 248
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ +++ + LFATLDP ++ LP G V+LSDTVGFISDLP L+ AF ATLE+V+EA
Sbjct: 249 TKAEVRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEA 308
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
D+L+HV D + + + V VL+++G+ E + +IEVWNK D DE
Sbjct: 309 DILLHVRDVSHGDTQAQAEDVEGVLRELGI-EADAERIIEVWNKADLLDE 357
>gi|254561989|ref|YP_003069084.1| GTPase [Methylobacterium extorquens DM4]
gi|254269267|emb|CAX25233.1| putative GTPase (HflX) [Methylobacterium extorquens DM4]
Length = 471
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 197/350 (56%), Gaps = 46/350 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L+EA+ LA ++E D V +Q P R T+ G G VE
Sbjct: 54 EARLDEAVGLAAAIE-----------LDVTRAISVHIQRP-------RPSTYLGKGRVEE 95
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I I E + + ++ LS +QQRNLE+AWG V+DR GLI+EIF A T+E
Sbjct: 96 IAGLIKAEE----IGLVVMDCALSPVQQRNLEKAWGAKVIDRTGLILEIFGRRASTREGT 151
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ E A L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 152 LQVEHAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 194
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + + +E V RTR + R +R R VA+VGYTNAGKSTL +AL
Sbjct: 195 RRMIQERMTRIERDLEAVTRTRGLHRKSRARVP------YPIVALVGYTNAGKSTLFNAL 248
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ +++ + LFATLDP ++ LP G V+LSDTVGFISDLP L+ AF ATLE+V+EA
Sbjct: 249 TKAEVRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEA 308
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
D+L+HV D + + + V VL+++G+ E + +IEVWNK D DE
Sbjct: 309 DILLHVRDVSHGDTQAQAEDVEGVLRELGI-EADAERIIEVWNKADLLDE 357
>gi|418938791|ref|ZP_13492254.1| GTP-binding proten HflX [Rhizobium sp. PDO1-076]
gi|375054528|gb|EHS50873.1| GTP-binding proten HflX [Rhizobium sp. PDO1-076]
Length = 444
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 156/413 (37%), Positives = 219/413 (53%), Gaps = 62/413 (15%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRV 180
+ R T G G +E + ++ E DA + V+ L+ +QQRNLE+ W V+DR
Sbjct: 58 QPRPATLLGSGKIEEVTAMLD------ERDAGLVIVDHPLTPVQQRNLEKEWNAKVIDRT 111
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLI+EIF A TKE LQ ELA L Y+K RLVR T E R
Sbjct: 112 GLILEIFGRRASTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQR 154
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG GF+ G GET+++ RR + +R L ++E+V RTR + RA RR+ V
Sbjct: 155 GGAGFMGGPGETQIEADRRMLQDRIVKLEKELEQVVRTRQLHRAKRRKVPHP------IV 208
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
A+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFIS+LP
Sbjct: 209 ALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISNLP 268
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVW 419
LV AF ATLEEV+EADL++HV D P+ VL++L +G+ E E+ + +IE+W
Sbjct: 269 THLVAAFRATLEEVLEADLILHVRDMADPDNGAQSADVLRILDDLGIDEKERSERIIEIW 328
Query: 420 NKIDYHDEEMGD--------------VEYIDGDDI--------SNFSRAEDKDTTSEPVD 457
NKID D E D V I G+ + S + T + P D
Sbjct: 329 NKIDRLDPETHDAIMQKAKGRENVMSVSAITGEGVDRLLDVISQRLSGVLTEATITIPAD 388
Query: 458 VECIDNYGGDDA------DNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDN 504
+ ++ ++A D+ DG VS D+ + + D + L SG + D
Sbjct: 389 KHALISWAYENAVVTGREDHEDGSVSLDV--RLTERQADEMERKLGSGQKPDK 439
>gi|398821352|ref|ZP_10579819.1| GTP-binding protein HflX [Bradyrhizobium sp. YR681]
gi|398227980|gb|EJN14135.1| GTP-binding protein HflX [Bradyrhizobium sp. YR681]
Length = 459
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/306 (46%), Positives = 187/306 (61%), Gaps = 31/306 (10%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGL 182
R T+ G G VE I A LDA + ++ L+ IQQRNLE+ VLDR GL
Sbjct: 80 RPATYIGKGKVEEI------AALAKSLDAELVVMDCALAPIQQRNLEKELQAKVLDRTGL 133
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A TKE LQ ELA L Y++SRLVR T E R GG
Sbjct: 134 ILEIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGG 176
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
GF+ G GET+++ RR I ER S L ++++V+ TR + RA R+R VA+
Sbjct: 177 FGFMGGPGETQIEADRRLIQERISKLEGELKKVQATRRLHRAGRQRVP------YRVVAL 230
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP Q
Sbjct: 231 VGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQ 290
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEEV+EAD+++HV D + + E ++ V VL+Q+G++ + +IEVWNKI
Sbjct: 291 LVAAFRATLEEVLEADVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKI 350
Query: 423 DYHDEE 428
D +D E
Sbjct: 351 DRYDAE 356
>gi|296535545|ref|ZP_06897727.1| GTP-binding protein HflX [Roseomonas cervicalis ATCC 49957]
gi|296264131|gb|EFH10574.1| GTP-binding protein HflX [Roseomonas cervicalis ATCC 49957]
Length = 393
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/321 (43%), Positives = 186/321 (57%), Gaps = 37/321 (11%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G VE I + ++ + V+A L+ +QQRNLER W V+DR GLI+
Sbjct: 23 RPSTLLGEGQVEMAAEAIE----ENQIGVVVVDAALTPVQQRNLERQWHCKVIDRTGLIL 78
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y+++RLVR T E R GG G
Sbjct: 79 EIFGERARTKEGTLQVELAHLEYQRTRLVR------SWTHLE-----------RQRGGFG 121
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GE+++++ RR I ER L ++E+VRRTR + RAAR R VA+VG
Sbjct: 122 FLGGPGESQIEIDRRLIGERIVKLKRELEQVRRTRGLHRAARTRVP------FPVVALVG 175
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL +AL+ + +++ +LFATLDP ++++ LPSGR V+LSDTVGFISDLP QL+
Sbjct: 176 YTNAGKSTLFNALTGAGVYAQDQLFATLDPTMRAIRLPSGRTVILSDTVGFISDLPTQLI 235
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL------KNMIEV 418
+AF ATLEEV AD+++HV D P+ R V+ VL ++ E IEV
Sbjct: 236 EAFRATLEEVAAADIILHVRDVAHPDTTAQRNDVVGVLSEMAKGEHPTLDENWPARTIEV 295
Query: 419 WNKIDYHDEEMGDVEYIDGDD 439
NK D +G + + G D
Sbjct: 296 LNKADL----LGGIAEVPGLD 312
>gi|337268990|ref|YP_004613045.1| GTP-binding proten HflX [Mesorhizobium opportunistum WSM2075]
gi|336029300|gb|AEH88951.1| GTP-binding proten HflX [Mesorhizobium opportunistum WSM2075]
Length = 468
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 191/343 (55%), Gaps = 32/343 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G VE + E EL + V+ L+ +QQRNLE+ VLDR GLI+
Sbjct: 85 RPATLLGSGKVEEFAEIVK--ERHAEL--VIVDHPLTPVQQRNLEKELNAKVLDRTGLIL 140
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y+K RLVR T E R GG G
Sbjct: 141 EIFGERARTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGAG 183
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR++ E+ L ++E VRRTR + RA R++ VA+VG
Sbjct: 184 FLGGPGETQIESDRRQLQEKIIKLKHELETVRRTRDLHRAKRKK------VPFPVVAIVG 237
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+ V LP G ++LSDTVGFISDLP L+
Sbjct: 238 YTNAGKSTLFNRLTGADVLAQDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDLPTHLI 297
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEVVEADL++H+ D + P+ V ++L +GV K +IEVWNKID
Sbjct: 298 AAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVERILADLGVDAGDAKRVIEVWNKIDQ 357
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 467
DE G+ + D++ A K P+ V + G D
Sbjct: 358 LDE--GNRSRLLAPDMAKGGAAGSK---GPPIAVSAVTGEGID 395
>gi|240139575|ref|YP_002964051.1| GTPase (HflX) [Methylobacterium extorquens AM1]
gi|418059980|ref|ZP_12697911.1| GTP-binding proten HflX [Methylobacterium extorquens DSM 13060]
gi|240009548|gb|ACS40774.1| putative GTPase (HflX) [Methylobacterium extorquens AM1]
gi|373566474|gb|EHP92472.1| GTP-binding proten HflX [Methylobacterium extorquens DSM 13060]
Length = 471
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 197/350 (56%), Gaps = 46/350 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L+EA+ LA ++E D V +Q P R T+ G G VE
Sbjct: 54 EARLDEAVGLAAAIE-----------LDVTRAISVHIQRP-------RPSTYLGKGRVEE 95
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I I E + + ++ LS +QQRNLE+AWG V+DR GLI+EIF A T+E
Sbjct: 96 IAGLIKAEE----IGLVVMDCALSPVQQRNLEKAWGAKVIDRTGLILEIFGRRASTREGT 151
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ E A L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 152 LQVEHAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 194
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + + +E V RTR + R +R R VA+VGYTNAGKSTL +AL
Sbjct: 195 RRMIQERMTRIERDLEAVTRTRGLHRKSRARVP------YPIVALVGYTNAGKSTLFNAL 248
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ +++ + LFATLDP ++ LP G V+LSDTVGFISDLP L+ AF ATLE+V+EA
Sbjct: 249 TKAEVRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEA 308
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
D+L+HV D + + + V VL+++G+ E + +IEVWNK D DE
Sbjct: 309 DILLHVRDVSHGDTQAQADDVEGVLRELGI-EADAERIIEVWNKADLLDE 357
>gi|398353354|ref|YP_006398818.1| GTPase HflX [Sinorhizobium fredii USDA 257]
gi|390128680|gb|AFL52061.1| GTPase HflX [Sinorhizobium fredii USDA 257]
Length = 440
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 202/357 (56%), Gaps = 40/357 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I HI + G + V+ L+ +QQRNLE+ W
Sbjct: 46 VVHGTVVAVAQPKPGTLLGSGKIEEI-GHILNEKDAG---LVIVDHPLTPVQQRNLEKEW 101
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 102 NAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE------ 149
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + ER L ++E+VRRTR + R+ R++
Sbjct: 150 -----RQRGGAGFMGGPGETQIEADRRLLQERIVRLERELEQVRRTRQLHRSKRKKVPHP 204
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LSDT
Sbjct: 205 ------IVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILSDT 258
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EK 411
VGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E E
Sbjct: 259 VGFISDLPTHLVAAFRATLEEVLEADLVLHVRDLSDPDNQAQASDVLRILADLGIDEKEG 318
Query: 412 LKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDD 468
+ ++EVWNKID + E+ + + +A D T V V I G DD
Sbjct: 319 AERIVEVWNKIDRLEPEVRE---------ALVKKAASADNT---VAVSAITGEGVDD 363
>gi|254451323|ref|ZP_05064760.1| GTP-binding proten HflX [Octadecabacter arcticus 238]
gi|198265729|gb|EDY89999.1| GTP-binding proten HflX [Octadecabacter arcticus 238]
Length = 449
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 256/500 (51%), Gaps = 81/500 (16%)
Query: 63 RLFLVQPRLKPPT---FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSL 119
R +++ P +K ++ L E + LA++L E E+ VV P +
Sbjct: 9 RAYVLHPEIKSDNKRRNAKSALEEGVALAHALPEL------------EVAGSQVVSLPKM 56
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
G FG G ++ IK + A++ + ++ +S +QQRNLE+ WG +LDR
Sbjct: 57 HPG-----MLFGKGKIQEIKGWLEDAKA----GLVLIDGHVSPVQQRNLEKEWGVKLLDR 107
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E R
Sbjct: 108 TGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQ 150
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG GF+ G GET+++ RR I + ++L Q+ +V +TR + R AR +
Sbjct: 151 RGGLGFVGGPGETQVEADRRAIDLQLNNLKKQLSKVVKTRELHRKARAK------VPYPI 204
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
VA+VGYTNAGKSTL + LS +D+F+ LFATLDP ++ V LP+G +V++SDTVGFISDL
Sbjct: 205 VALVGYTNAGKSTLFNRLSGADVFAHDMLFATLDPTMRKVELPNGDEVIMSDTVGFISDL 264
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P QLV +F ATLEEV+EAD+++HV D + P E + VL L+Q+ V+ + MIEV
Sbjct: 265 PTQLVASFRATLEEVLEADIILHVRDISHPQSAEQKKAVLDTLRQLDVNPD--VPMIEVL 322
Query: 420 NKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN---NDGFV 476
NKID + E D + + DK V E +D D D+ +
Sbjct: 323 NKIDLLEPE-------DAGYLQALHKDNDKVFGISAVTGEGLDRLLNDVTDHLIVQTRTL 375
Query: 477 SEDLGESMN------------KNHNDYSDGWLL----SGDEQDNVEEEFWNAAEDQQPES 520
+ DL +M ++ GW L + +Q + E++F +A DQ E
Sbjct: 376 TLDLDWAMGAAQSWLRAEGVIESEAQTDTGWTLDVRWTTRQQAHFEKQFPDAFPDQVVED 435
Query: 521 TKDVCVMEKDSQSQDQHAPD 540
T ++D+ S D H D
Sbjct: 436 T------DEDAPSGDYHPLD 449
>gi|378825779|ref|YP_005188511.1| tRNA modification GTPase mnmE [Sinorhizobium fredii HH103]
gi|365178831|emb|CCE95686.1| tRNA modification GTPase mnmE [Sinorhizobium fredii HH103]
Length = 440
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/320 (43%), Positives = 191/320 (59%), Gaps = 32/320 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I HI + G + V+ L+ +QQRNLE+ W
Sbjct: 46 VVHGTIVSVAQPKPGTLLGSGKIEEI-GHILNEKDAG---LVIVDHPLTPVQQRNLEKEW 101
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 102 NAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE------ 149
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + ER L ++E+VRRTR + R+ R++ H
Sbjct: 150 -----RQRGGAGFMGGPGETQIEADRRLLQERIVRLERELEQVRRTRQLHRSKRKKVPH- 203
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LS
Sbjct: 204 -------PIVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILS 256
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 409
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E
Sbjct: 257 DTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDLSDPDNQAQASDVLRILTDLGIDEK 316
Query: 410 EKLKNMIEVWNKIDYHDEEM 429
E + ++EVWNKID + E+
Sbjct: 317 EGSERIVEVWNKIDRLEPEV 336
>gi|84684892|ref|ZP_01012792.1| GTP-binding protein HflX [Maritimibacter alkaliphilus HTCC2654]
gi|84667227|gb|EAQ13697.1| GTP-binding protein HflX [Maritimibacter alkaliphilus HTCC2654]
Length = 427
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 191/321 (59%), Gaps = 29/321 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV + ++ K FG G + + + E++ + ++ +S +QQRN
Sbjct: 42 LPGLEVVGSQIVRLPKPHPGHLFGTGKTDELAALLKA----NEIELVLIDGPVSPVQQRN 97
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LER W +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 98 LEREWKVKILDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHLE- 150
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ + L Q+ +V +TR ++RAAR
Sbjct: 151 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLTRLRKQLAKVVKTRELRRAARA 200
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKV 347
+ VA+VGYTNAGKSTL + ++ +++ + LFATLDP ++ V LP GR V
Sbjct: 201 K------VPFPVVALVGYTNAGKSTLFNRMTGAEVMAKDMLFATLDPTMRGVDLPGGRTV 254
Query: 348 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 407
+LSDTVGFISDLP QLV AF ATLEEV+ ADL++HV D +E VL +L+ +GV
Sbjct: 255 ILSDTVGFISDLPTQLVAAFRATLEEVLGADLILHVRDIAHDETQEQAEDVLAILEDLGV 314
Query: 408 SEEKLKNMIEVWNKIDYHDEE 428
E+ +IEVWNKID D++
Sbjct: 315 DED--VPLIEVWNKIDKLDDQ 333
>gi|117923594|ref|YP_864211.1| HSR1-like GTP-binding protein [Magnetococcus marinus MC-1]
gi|347602422|sp|A0L4B2.1|HFLX_MAGSM RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|117607350|gb|ABK42805.1| GTP-binding protein, HSR1-related protein [Magnetococcus marinus
MC-1]
Length = 432
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/305 (44%), Positives = 182/305 (59%), Gaps = 30/305 (9%)
Query: 119 LKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLD 178
L KA T+FG G VE + I + E+D VN L+ IQQRNLE+ V+D
Sbjct: 50 LSLQKAVPATYFGSGQVEELARRIE----EDEIDVAVVNHALTPIQQRNLEKKLNAKVVD 105
Query: 179 RVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR 238
R GLI+EIF A A T+E +Q ELA+LMY++SRLVR T E V
Sbjct: 106 RTGLILEIFAARARTREGIMQVELASLMYQQSRLVR------SWTHLERQRGGVGLR--- 156
Query: 239 GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
G GE ++++ RR I ER L Q+EEV RTRA+QR R+ L
Sbjct: 157 --------GGPGERQIEVDRRLIRERIHKLKKQLEEVERTRALQRQPRQ------DIPLF 202
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
TVA+VGYTNAGKSTL + L+ + + ++ +LFATLDP +++V LP G ++LLSDTVGFI
Sbjct: 203 TVALVGYTNAGKSTLFNLLTRAGVLAEDKLFATLDPTMRAVDLPDGGRILLSDTVGFIRQ 262
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP QLV AF ATLEEV+ AD+L+HV+D + P E + +V VLQ++ V + + V
Sbjct: 263 LPHQLVAAFKATLEEVMSADMLLHVVDLSDPEWERYVESVNGVLQELEVQHTR---TLTV 319
Query: 419 WNKID 423
+NKID
Sbjct: 320 YNKID 324
>gi|227821866|ref|YP_002825836.1| GTP-binding protein [Sinorhizobium fredii NGR234]
gi|227340865|gb|ACP25083.1| putative GTP-binding protein [Sinorhizobium fredii NGR234]
Length = 440
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 188/314 (59%), Gaps = 32/314 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I HI + G + V+ L+ +QQRNLE+ W
Sbjct: 46 VVHGTVVPVAQPKPGTLLGSGKIEEI-GHILNEKDAG---LVIVDHPLTPVQQRNLEKEW 101
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 102 NAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE------ 149
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + ER L ++E+VRRTR + R+ R++ H
Sbjct: 150 -----RQRGGAGFMGGPGETQIEADRRLLQERIVRLERELEQVRRTRQLHRSKRKKVPH- 203
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LS
Sbjct: 204 -------PIVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILS 256
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 409
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E
Sbjct: 257 DTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDLSDPDNQAQASDVLRILADLGIDEK 316
Query: 410 EKLKNMIEVWNKID 423
E + ++EVWNKID
Sbjct: 317 EGSERIVEVWNKID 330
>gi|222085896|ref|YP_002544427.1| GTP-binding protein [Agrobacterium radiobacter K84]
gi|398378702|ref|ZP_10536858.1| GTP-binding protein HflX [Rhizobium sp. AP16]
gi|221723344|gb|ACM26500.1| GTP-binding protein [Agrobacterium radiobacter K84]
gi|397724354|gb|EJK84825.1| GTP-binding protein HflX [Rhizobium sp. AP16]
Length = 443
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 188/312 (60%), Gaps = 36/312 (11%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGL 182
R T G G +E I ++ EL+A + V+ L+ +QQRNLE+AW V+DR GL
Sbjct: 60 RPATLLGTGKIEEILALLD------ELNAGLVIVDHPLTPVQQRNLEKAWNAKVIDRTGL 113
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A TKE LQ ELA L Y+K RLVR T E R GG
Sbjct: 114 ILEIFGRRASTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGG 156
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATV 300
GF+ G GET+++ RR++ ER L ++E+V RTR + RA RR+ H V
Sbjct: 157 AGFMGGPGETQIEADRRQLQERIIRLERELEQVVRTRQLHRAKRRKVPH--------PIV 208
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
A+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP
Sbjct: 209 ALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLP 268
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVW 419
LV AF ATLEEV+EADL++HV D + + + V+++L +G+ E E + ++EVW
Sbjct: 269 THLVAAFRATLEEVLEADLILHVRDLSDEDNQAQSADVMRILGDLGIGEAEGAERILEVW 328
Query: 420 NKIDYHDEEMGD 431
NKID + E D
Sbjct: 329 NKIDRLEPEAHD 340
>gi|197105188|ref|YP_002130565.1| GTP-binding protein HflX [Phenylobacterium zucineum HLK1]
gi|196478608|gb|ACG78136.1| GTP-binding protein HflX [Phenylobacterium zucineum HLK1]
Length = 424
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/346 (42%), Positives = 199/346 (57%), Gaps = 46/346 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
QA+L EA+ LA +L D E+ +V L T FG G VE
Sbjct: 17 QARLEEAVGLAQAL-------------DLEVRETLVAPLRRLTPA-----TLFGKGKVE- 57
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ E D + V+ L+ +QQRNLE+AW V+DR GLI+EIF A T+E +
Sbjct: 58 ---EVAAVVDSVEADVVVVDDALTPVQQRNLEKAWKAKVIDRTGLILEIFARRARTREGR 114
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GG G + G GET+++
Sbjct: 115 LQVELARLTYERSRLVRT------WTHLE-----------RQRGGFGVMGGPGETQIETD 157
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR + E+ L ++ EVRRTR +QR+ARRR TVA+VGYTNAGKSTL + L
Sbjct: 158 RRLLAEKIGKLKRELVEVRRTRTLQRSARRRVP------YPTVALVGYTNAGKSTLFNRL 211
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ +++ + LFATLDP L+ + LP GR +LSDTVGFISDLP +LV+AF ATLEEV EA
Sbjct: 212 TQAEVLAQDMLFATLDPTLRMLKLPDGRPAILSDTVGFISDLPHELVEAFRATLEEVREA 271
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
D+++HV D + E V VLQ++GV ++ + ++EVWNK+D
Sbjct: 272 DVVLHVRDIASEETEAQAQDVRTVLQRLGVDMDE-RRILEVWNKVD 316
>gi|222148577|ref|YP_002549534.1| GTP-binding protein HFLX [Agrobacterium vitis S4]
gi|221735563|gb|ACM36526.1| GTP-binding protein HFLX [Agrobacterium vitis S4]
Length = 444
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 189/319 (59%), Gaps = 32/319 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+VQ + + R T G G +E IK ++ ++ + V+ L+ +QQRNLE+ W
Sbjct: 49 IVQGLIVAVNQPRPATLIGSGKIEEIKALLDNHDA----GLVIVDHPLTPVQQRNLEKQW 104
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 105 NAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE------ 152
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + +R L ++E+V RTR + RA RR+ H
Sbjct: 153 -----RQRGGAGFMGGPGETQIEADRRMLQDRIVRLERELEQVVRTRQLHRAKRRKVPH- 206
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LS
Sbjct: 207 -------PIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPQGRTVILS 259
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 409
DTVGFISDLP LV AF ATLEEV+EADL++HV D P+ V+++L +G+ E
Sbjct: 260 DTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDMADPDNGAQAGDVMRILSDLGIDEK 319
Query: 410 EKLKNMIEVWNKIDYHDEE 428
E+ + +IEVWNKID + E
Sbjct: 320 ERDERIIEVWNKIDRLEPE 338
>gi|409400612|ref|ZP_11250632.1| GTP-binding protein HflX [Acidocella sp. MX-AZ02]
gi|409130430|gb|EKN00196.1| GTP-binding protein HflX [Acidocella sp. MX-AZ02]
Length = 426
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/300 (45%), Positives = 185/300 (61%), Gaps = 31/300 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G VE + GA+ +D V+A L+ +QQRNLE+A+G V+DR GLI++IF
Sbjct: 64 TLLGKGQVELAATALRGAQ----VDVAVVDAALTPVQQRNLEKAFGTKVIDRTGLILDIF 119
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A A T+E LQ ELA L Y++SRLVR T E R GG GF+
Sbjct: 120 GARARTREGSLQVELAHLEYQRSRLVR------SWTHLE-----------RQRGGFGFLG 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R L +++EEVRRTR + R AR++ VA+VGYTN
Sbjct: 163 GPGETQIEADRRLIGDRIVKLKAELEEVRRTRGLHRGARKKVP------YPVVALVGYTN 216
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +AL+ + + ++ +LFATLDP ++ +VLPSGR ++LSDTVGFIS+LP +LV AF
Sbjct: 217 AGKSTLFNALTGATVMAEDQLFATLDPTMRGLVLPSGRNIILSDTVGFISELPTELVAAF 276
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----VSEEKLKNMIEVWNKID 423
ATLEEV EADLL+HV D + P+ E V VL ++ + E + +EV NK D
Sbjct: 277 RATLEEVAEADLLLHVRDISHPDTEAQARDVRAVLTRMAKEGTLDEGWPSHTLEVLNKAD 336
>gi|405381115|ref|ZP_11034947.1| GTP-binding protein HflX [Rhizobium sp. CF142]
gi|397322437|gb|EJJ26843.1| GTP-binding protein HflX [Rhizobium sp. CF142]
Length = 441
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 230/434 (52%), Gaps = 78/434 (17%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L+EA LA ++ D D + + V V +P R T G G +E
Sbjct: 28 ESRLDEATGLAQAI--------DLDVVNASI---VSVSDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKHLLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRLLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD--- 431
EADL++HV D + + + VL++L +G+ E E + ++EVWNKID + E D
Sbjct: 281 EADLVLHVRDMSDVDNQAQSADVLRILNDLGIDEAEGERRILEVWNKIDRLEPEAHDAMV 340
Query: 432 -----------VEYIDG-------DDIS-NFSRAEDKDTTSEPVDVECIDNYGGDDA--- 469
V I G D+IS S + T + PVD + + D A
Sbjct: 341 QKSSGMKNVIAVSAISGEGVDRLMDEISRRLSGVMTETTVTLPVDKLALLPWLYDHAVVG 400
Query: 470 ---DNNDGFVSEDL 480
DN DG V+ DL
Sbjct: 401 SREDNEDGSVTLDL 414
>gi|347761715|ref|YP_004869276.1| GTP-binding GTPase [Gluconacetobacter xylinus NBRC 3288]
gi|347580685|dbj|BAK84906.1| GTP-binding GTPase [Gluconacetobacter xylinus NBRC 3288]
Length = 436
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/353 (41%), Positives = 202/353 (57%), Gaps = 39/353 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VVV L R T G G VE++K + + + +++ L+ +QQRNLERA
Sbjct: 47 VVVCQAVLLLRARRPATLLGGGQVESLKETVKA----DNITVVIIDSRLTPVQQRNLERA 102
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR LI++IF A T+E LQ ELA L Y++SRLVR T E
Sbjct: 103 LGCKVIDRTALILDIFGERAATREGTLQVELAHLEYQRSRLVRT------WTHLE----- 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + R ARRR
Sbjct: 152 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRQARRRVP- 204
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++ + LPSGR+V+LSD
Sbjct: 205 -----FPIVALVGYTNAGKSTLFNALTGASVYAQDQLFATLDPTMRGIQLPSGRRVILSD 259
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 407
TVGFISDLP +L+ AF ATLEEV EAD+++HV D + P+ R V++VL+ + +
Sbjct: 260 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVSHPDSASQRNDVIEVLEGMARNGTI 319
Query: 408 SEEKLKNMIEVWNKIDY--HDEEMGD------VEYIDGDDISNFSRAEDKDTT 452
E+ +IEV NK D E +G + I GD + + A D+ T
Sbjct: 320 EEDWQGRIIEVLNKADLVGGREAVGARPGNVVISAITGDGLPDLLAAIDERMT 372
>gi|386395331|ref|ZP_10080109.1| GTP-binding protein HflX [Bradyrhizobium sp. WSM1253]
gi|385735957|gb|EIG56153.1| GTP-binding protein HflX [Bradyrhizobium sp. WSM1253]
Length = 460
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 186/304 (61%), Gaps = 27/304 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I G + ++ + ++ L+ IQQRNLE+ VLDR GLI+
Sbjct: 80 RPATYIGKGKVEEIAALAKGLD----VELVVMDCALAPIQQRNLEKELQAKVLDRTGLIL 135
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y++SRLVR T E R GG G
Sbjct: 136 EIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 178
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER S L ++++V+ TR + RA R+R VA+VG
Sbjct: 179 FMGGPGETQIEADRRLIQERISKLEGELKKVQATRRLHRAGRQRVP------YRVVALVG 232
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP QLV
Sbjct: 233 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLV 292
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EAD+++HV D + + E ++ V VL+Q+G++ + +IEVWNKID
Sbjct: 293 AAFRATLEEVLEADVILHVRDISHDDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDR 352
Query: 425 HDEE 428
+ E
Sbjct: 353 YGPE 356
>gi|383649571|ref|ZP_09959977.1| HSR1-like GTP-binding protein [Sphingomonas elodea ATCC 31461]
Length = 430
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 208/381 (54%), Gaps = 51/381 (13%)
Query: 52 TLFNRDPDDPPR---LFLVQPRLKPPTF-LQAKLNEALCLANSLEEQRDGYFDTDFFDKE 107
T F RDPD+ R +V P + + +A+L E LA ++
Sbjct: 3 TGFERDPDEFARGAKALVVYPDMGGSSRDAEARLEETAGLAAAIGVD------------- 49
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
VV+ +++ + + T G G VE + + GEL +A L+ +QQRN
Sbjct: 50 -----VVERVAVRLRQPKPGTLIGSGQVEALAETVR----DGELQLAVFDAALTPVQQRN 100
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE A G V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 101 LETALGCKVIDRTGLILEIFGERARTAEGRLQVELAHLDYQAGRLVR------SWTHLE- 153
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I +R + L ++++V RTR + R R+
Sbjct: 154 ----------RQRGGFGFLGGPGETQIEADRRLIRDRMARLRRELDQVSRTRTLHRDRRQ 203
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKV 347
R VA+VGYTNAGKSTL + L+ +++ ++ LFATLDP L+ + LP K
Sbjct: 204 RAP------WPVVALVGYTNAGKSTLFNRLTGAEVMAENLLFATLDPTLRQISLPGIDKA 257
Query: 348 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 407
+LSDTVGF+S+LP QLV AF ATLEEVV ADLL+HV D P+ E R V +VLQ++GV
Sbjct: 258 ILSDTVGFVSELPTQLVAAFKATLEEVVSADLLIHVRDIAHPDTEAQRVDVEKVLQEIGV 317
Query: 408 SEEKLKNMIEVWNKIDYHDEE 428
SE + E WNK+D D+E
Sbjct: 318 SEHTPR--FEAWNKLDLLDDE 336
>gi|257219496|gb|ACV50404.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. viciae]
Length = 432
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 205/357 (57%), Gaps = 50/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGQIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+E+F A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEVFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 431
EADL++ V D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILRVRDMSDADNQAQSSDVMRILNDLGIDEAEAEKRLIEVWNKIDRLEPEVHD 337
>gi|330993264|ref|ZP_08317200.1| GTP-binding protein hflX [Gluconacetobacter sp. SXCC-1]
gi|329759666|gb|EGG76174.1| GTP-binding protein hflX [Gluconacetobacter sp. SXCC-1]
Length = 436
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/353 (41%), Positives = 202/353 (57%), Gaps = 39/353 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VVV L R T G G VE++K + + + +++ L+ +QQRNLERA
Sbjct: 47 VVVCQAVLLLRARRPATLLGGGQVESLKETVKA----DNITVVIIDSRLTPVQQRNLERA 102
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR LI++IF A T+E LQ ELA L Y++SRLVR T E
Sbjct: 103 LGCKVIDRTALILDIFGERAATREGTLQVELAHLEYQRSRLVRT------WTHLE----- 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + R ARRR
Sbjct: 152 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRQARRRVP- 204
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++ + LPSGR+V+LSD
Sbjct: 205 -----FPIVALVGYTNAGKSTLFNALTGASVYAQDQLFATLDPTMRGIQLPSGRRVILSD 259
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 407
TVGFISDLP +L+ AF ATLEEV EAD+++HV D + P+ R V++VL+ + +
Sbjct: 260 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVSHPDSASQRQDVIEVLEGMARNGTI 319
Query: 408 SEEKLKNMIEVWNKIDY--HDEEMGD------VEYIDGDDISNFSRAEDKDTT 452
E+ +IEV NK D E +G + I GD + + A D+ T
Sbjct: 320 EEDWQGRVIEVLNKADLVGGREAVGARPGNVVISAITGDGLPDLLAAIDERMT 372
>gi|163746239|ref|ZP_02153597.1| GTP-binding protein HflX, putative [Oceanibulbus indolifex HEL-45]
gi|161380124|gb|EDQ04535.1| GTP-binding protein HflX, putative [Oceanibulbus indolifex HEL-45]
Length = 432
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 185/302 (61%), Gaps = 29/302 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A FG G +E ++ + AE ++ + V+ ++ +QQRNLE+AWG +LDR GLI+E
Sbjct: 67 AGMLFGKGKIEELEQRMKAAE----VELVLVDGPVTPVQQRNLEKAWGVKLLDRTGLILE 122
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF+ A T+E LQ E+AAL Y+++RLVR T E R GG GF
Sbjct: 123 IFSDRAATREGVLQVEMAALNYQRTRLVRA------WTHLE-----------RQRGGLGF 165
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+++ RR I ++ L Q+E+V +TRA+ RAAR + VA+VGY
Sbjct: 166 VGGPGETQIEADRRAIDDQLVRLRRQLEKVVKTRALHRAARAKVP------FPIVALVGY 219
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ +++ + LFATLDP ++S+VLP G +++LSDTVGFISDLP +LV
Sbjct: 220 TNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRSLVLPDGPEIILSDTVGFISDLPTELVA 279
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
+F ATLEEV+ AD++ HV D + EE V +L +GV +E EVWNK+D
Sbjct: 280 SFRATLEEVLAADIICHVRDVSHAETEEQAQNVRDILASLGVPKE--TRSFEVWNKLDLL 337
Query: 426 DE 427
E
Sbjct: 338 PE 339
>gi|399039281|ref|ZP_10734885.1| GTP-binding protein HflX [Rhizobium sp. CF122]
gi|398062569|gb|EJL54339.1| GTP-binding protein HflX [Rhizobium sp. CF122]
Length = 444
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 39/357 (10%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G ++ IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+
Sbjct: 60 RPATLMGTGKIDEIKATLDANDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLIL 115
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ +LA L Y+K RLVR T E R GG G
Sbjct: 116 EIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGG 158
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAV 302
F+ G GET+++ RR + +R L ++E+V RTR + RA R++ H VA+
Sbjct: 159 FMGGPGETQIEADRRMLQDRIIKLERELEQVVRTRQLHRAKRKKVPH--------PIVAL 210
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP
Sbjct: 211 VGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTH 270
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL-KNMIEVWNK 421
LV AF ATLEEV+EADL++HV D + + + VL++L+ +G+ EE+ K +IEVWNK
Sbjct: 271 LVAAFRATLEEVLEADLILHVRDMSDVDNQAQSVDVLRILKDLGIDEEEGDKRIIEVWNK 330
Query: 422 IDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE 478
ID + E D + S AE+ S + E ID G+ + G ++E
Sbjct: 331 IDRLEREAHDA------IVQKASGAENVVALS-AISGEGIDTLMGEISRRLSGVLTE 380
>gi|115524769|ref|YP_781680.1| HSR1-like GTP-binding protein [Rhodopseudomonas palustris BisA53]
gi|115518716|gb|ABJ06700.1| GTP-binding protein, HSR1-related protein [Rhodopseudomonas
palustris BisA53]
Length = 455
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/304 (45%), Positives = 187/304 (61%), Gaps = 27/304 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE + I E+ + ++ LS IQQRNLE+AWG VLDR GLI+
Sbjct: 76 RPATYLGKGKVEDVLAAIKA----HEVGLVVMDCALSPIQQRNLEKAWGTKVLDRTGLIL 131
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 132 EIFGRRAKTREGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 174
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R + + S++++V+ TR + RA R+R VA+VG
Sbjct: 175 FLGGPGETQIEADRRLIGDRITKIESELKKVQSTRRLHRAGRQRVP------YRVVALVG 228
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +++ + LFATLDP L+++VLP G K +LSDTVGFIS+LP QLV
Sbjct: 229 YTNAGKSTLFNRLTRAEVQAADMLFATLDPTLRALVLPHGGKAMLSDTVGFISNLPTQLV 288
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EADL++HV D + + + + V VL+Q+G++ +IEVWNKID
Sbjct: 289 AAFRATLEEVLEADLILHVRDISHEDADAQQDDVDAVLRQLGIAPGTGSPIIEVWNKIDR 348
Query: 425 HDEE 428
E
Sbjct: 349 FSPE 352
>gi|349686568|ref|ZP_08897710.1| GTP-binding GTPase [Gluconacetobacter oboediens 174Bp2]
Length = 436
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/316 (43%), Positives = 190/316 (60%), Gaps = 31/316 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VVV L R T G G V+++K + + + +++ L+ +QQRNLERA
Sbjct: 47 VVVCQAVLLLRARRPATLLGGGQVDSLKETVKA----DNITVVIIDSRLTPVQQRNLERA 102
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR LI++IF A T+E LQ ELA L Y++SRLVR T E
Sbjct: 103 LGCKVIDRTALILDIFGERAATREGTLQVELAHLEYQRSRLVRT------WTHLE----- 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + R ARRR
Sbjct: 152 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRQARRRVP- 204
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++ + LPSGR+V+LSD
Sbjct: 205 -----FPIVALVGYTNAGKSTLFNALTGASVYAQDQLFATLDPTMRGIQLPSGRRVILSD 259
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 407
TVGFISDLP +L+ AF ATLEEV EAD+++HV D + P+ RT V++VL+ + +
Sbjct: 260 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVSHPDSASQRTDVIEVLEGMARNGTI 319
Query: 408 SEEKLKNMIEVWNKID 423
++ +IEV NK D
Sbjct: 320 EQDWQSRVIEVLNKAD 335
>gi|295689384|ref|YP_003593077.1| GTP-binding proten HflX [Caulobacter segnis ATCC 21756]
gi|295431287|gb|ADG10459.1| GTP-binding proten HflX [Caulobacter segnis ATCC 21756]
Length = 446
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 205/361 (56%), Gaps = 51/361 (14%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L EA+ LA +L D D + + P V P+ T FG G VE
Sbjct: 40 ARLEEAVGLAVAL--------DLDVVEALIAPLRAV-TPA---------TLFGKGKVEEF 81
Query: 139 K--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
C + +D + L+ IQQRNLE+A V+DR GLI+EIF A T+E
Sbjct: 82 AAICEVE------HIDVAVFDDQLTPIQQRNLEKALEVKVVDRTGLILEIFARRARTREG 135
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ ELA L Y++SRLVR T E R GG G G GET++++
Sbjct: 136 KLQVELARLDYERSRLVRT------WTHLE-----------RQRGGTGSTGGPGETQIEI 178
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I L ++EEVRRTR + R+AR++ TVA+VGYTNAGKSTL +
Sbjct: 179 DRRLIAGTIIKLKRELEEVRRTRTLHRSARKKVP------YPTVALVGYTNAGKSTLFNR 232
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVE 376
L+++++ + LFATLDP L++V LP GR ++SDTVGFISDLP +LV+AF ATLEEV E
Sbjct: 233 LTEAEVLAKDMLFATLDPTLRTVKLPDGRPAIMSDTVGFISDLPHELVEAFRATLEEVQE 292
Query: 377 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 436
AD+++HV D P+ E V VL ++GV+ + K ++EVWNKID E+ D E I+
Sbjct: 293 ADVVLHVRDVANPDSEAQARDVETVLSELGVTLDGGKTVVEVWNKIDLLSED--DREIIE 350
Query: 437 G 437
G
Sbjct: 351 G 351
>gi|150396315|ref|YP_001326782.1| HSR1-like GTP-binding protein [Sinorhizobium medicae WSM419]
gi|150027830|gb|ABR59947.1| GTP-binding protein HSR1-related [Sinorhizobium medicae WSM419]
Length = 465
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/323 (42%), Positives = 193/323 (59%), Gaps = 32/323 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I H+ + G + V+ L+ +QQRNLE+ W
Sbjct: 71 VVHGMVVPVAQPKPGTLLGTGKIEEI-GHVLSDKDAG---LVIVDHPLTPVQQRNLEKEW 126
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T+E LQ +LA L Y+K RLVR T E
Sbjct: 127 NAKVIDRTGLILEIFGRRASTREGTLQVDLAHLNYQKGRLVR------SWTHLE------ 174
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + ER L ++E+VRRTR + R+ R++ H
Sbjct: 175 -----RQRGGAGFMGGPGETQIEADRRLLQERIVKLERELEQVRRTRQLHRSKRKKVPH- 228
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LS
Sbjct: 229 -------PIVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILS 281
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 409
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E
Sbjct: 282 DTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDLSDPDNQAQASDVLRILSDLGIDEK 341
Query: 410 EKLKNMIEVWNKIDYHDEEMGDV 432
E + ++EVWNKID + E+ +V
Sbjct: 342 EGAERIVEVWNKIDKVEPEVREV 364
>gi|254459937|ref|ZP_05073353.1| GTP-binding proten HflX [Rhodobacterales bacterium HTCC2083]
gi|206676526|gb|EDZ41013.1| GTP-binding proten HflX [Rhodobacteraceae bacterium HTCC2083]
Length = 423
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 46/357 (12%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
++V+ P KA + FG G +E + + E +D + ++ ++ +QQRNLE+A
Sbjct: 49 IIVRLP-----KAHSGMLFGKGKIEELHQLFDAEE----VDLVLIDGPVTPVQQRNLEKA 99
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
WG +LDR GLI+EIF+ A T E LQ E+AAL Y+++RLVR T E
Sbjct: 100 WGVKLLDRTGLILEIFSDRARTSEGVLQVEMAALSYQRTRLVRA------WTHLE----- 148
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I ++ L ++ +V +TRA+ R AR +
Sbjct: 149 ------RQRGGLGFVGGPGETQIESDRRAIDDQLVRLRRKLSKVVKTRALHREARAK--- 199
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL + L+ +++F+ LFATLDP +++V LP G +V+LSD
Sbjct: 200 ---VPFPIVALVGYTNAGKSTLFNRLTGAEVFAKDMLFATLDPTMRAVELPDGPQVILSD 256
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFISDLP +LV +F ATLEEV+ ADL+VHV D + EE T V +L +GV E
Sbjct: 257 TVGFISDLPTELVASFRATLEEVLAADLIVHVRDISHEGTEEQATDVRAILTSLGVGEG- 315
Query: 412 LKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDD 468
IEVWNKID +E D D + +RA D + + V I YG D
Sbjct: 316 -AKQIEVWNKIDL-------LEPDDKDAV--LARAARHD---DVIAVSSISGYGMQD 359
>gi|319783406|ref|YP_004142882.1| GTP-binding proten HflX [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169294|gb|ADV12832.1| GTP-binding proten HflX [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 463
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/333 (42%), Positives = 184/333 (55%), Gaps = 27/333 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G V + +G + + V+ L+ +QQRNLE+ VLDR GLI+
Sbjct: 85 RPATLLGSGKVAEFAEIVK----EGHAEVVVVDHPLTPVQQRNLEKELNAKVLDRTGLIL 140
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y+K RLVR T E R GG G
Sbjct: 141 EIFGERARTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGAG 183
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR++ E+ L ++E VRRTR + RA RR+ VA+VG
Sbjct: 184 FLGGPGETQIESDRRQLQEKIIKLKQELETVRRTRDLHRAKRRK------VPFPVVAIVG 237
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+ V LP G ++LSDTVGFISDLP L+
Sbjct: 238 YTNAGKSTLFNRLTGADVLAQDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDLPTHLI 297
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEVVEADL++H+ D + P+ V ++L +GV K +IEVWNKID
Sbjct: 298 AAFRATLEEVVEADLVLHLRDISDPDTAAQAEDVERILADLGVDAGDAKRVIEVWNKIDR 357
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
DE DG D + T E +D
Sbjct: 358 LDEGNRTRLLADGADANKAPPIAVSAVTGEGID 390
>gi|27379603|ref|NP_771132.1| GTP-binding protein HflX [Bradyrhizobium japonicum USDA 110]
gi|27352755|dbj|BAC49757.1| GTP-binding protein HFLX [Bradyrhizobium japonicum USDA 110]
Length = 437
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/305 (45%), Positives = 189/305 (61%), Gaps = 29/305 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKG-ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
R T+ G G VE I A +K +++ + ++ L+ IQQRNLE+ VLDR GLI
Sbjct: 57 RPATYIGKGKVEEI-----AALAKSLDVELVVMDCALAPIQQRNLEKELHAKVLDRTGLI 111
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
+EIF A TKE LQ ELA L Y++SRLVR T E R GG
Sbjct: 112 LEIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGF 154
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
GF+ G GET+++ RR I ER S L ++++V+ TR + RA R+R VA+V
Sbjct: 155 GFMGGPGETQIEADRRLIQERISKLEGELKKVQATRRLHRAGRQRVP------YRVVALV 208
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQL 363
GYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP QL
Sbjct: 209 GYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQL 268
Query: 364 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+ AF ATLEEV+EAD+++HV D + + E ++ V VL+Q+G++ + +IEVWNKID
Sbjct: 269 IAAFRATLEEVLEADVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKID 328
Query: 424 YHDEE 428
+D E
Sbjct: 329 RYDAE 333
>gi|386349752|ref|YP_006048000.1| small GTP-binding protein domain-containing protein [Rhodospirillum
rubrum F11]
gi|346718188|gb|AEO48203.1| small GTP-binding protein domain-containing protein [Rhodospirillum
rubrum F11]
Length = 435
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 139/301 (46%), Positives = 181/301 (60%), Gaps = 27/301 (8%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G VE + I AE+ + + V+ LS IQQRNLERAW V+DR GLI+EIF
Sbjct: 66 TYIGGGAVERM-AGIIAAEA---ISLVVVDTQLSPIQQRNLERAWACKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E ++Q ELA L Y++SRLVR T E R GG GF+
Sbjct: 122 GERARTAEGQMQVELAHLTYQRSRLVR------SWTHLE-----------RQRGGVGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++L RR I +R + L +EEVRRTR + R AR R VA+VGYTN
Sbjct: 165 GPGETQIELDRRLIGDRITRLRKDLEEVRRTRGLHREARARVP------YPVVALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
+GKSTL + L+ + + LFATLDP ++S+ LPSGRKV+LSDTVGF+SDLP +LV AF
Sbjct: 219 SGKSTLFNRLTAGGVLAKDMLFATLDPTMRSLDLPSGRKVILSDTVGFVSDLPHELVAAF 278
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEEV AD++VHV D + + + V VL+++ + E +IE NKID D
Sbjct: 279 RATLEEVKAADVIVHVRDIAGIDSDAQKADVEVVLREMELDERVESGLIEALNKIDLLDS 338
Query: 428 E 428
E
Sbjct: 339 E 339
>gi|399992676|ref|YP_006572916.1| GTP-binding protein HflX [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398657231|gb|AFO91197.1| GTP-binding protein HflX [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 423
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 194/324 (59%), Gaps = 29/324 (8%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP V+ + ++ KA A FG G ++ +K + E ++ + ++ +S +QQRN
Sbjct: 40 LPDIEVIGSAVVRLPKAHAGMLFGSGKIDELKAQFHDEE----VELVLIDGPVSPVQQRN 95
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 96 LEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE- 148
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAAR
Sbjct: 149 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLDKVVKTRTLHRAARA 198
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKV 347
+ VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP G ++
Sbjct: 199 KIP------YPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVQLPDGPEI 252
Query: 348 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 407
+LSDTVGFISDLP +LV AF ATLEEV+ AD++VHV D + + V +L +GV
Sbjct: 253 ILSDTVGFISDLPTELVAAFRATLEEVLAADVVVHVRDISHDETQNQAADVESILASLGV 312
Query: 408 SEEKLKNMIEVWNKIDYHDEEMGD 431
+ + + +EVWNK+D D+E +
Sbjct: 313 DDSRAR--LEVWNKLDLLDDEQAE 334
>gi|221234757|ref|YP_002517193.1| GTP-binding protein hflX [Caulobacter crescentus NA1000]
gi|220963929|gb|ACL95285.1| GTP-binding protein hflX [Caulobacter crescentus NA1000]
Length = 446
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 207/361 (57%), Gaps = 51/361 (14%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L EA+ LA +L D + + + P VV P+ T FG G VE
Sbjct: 40 ARLEEAVGLAVAL--------DLNVVEALVAPLRVV-TPA---------TLFGKGKVEEF 81
Query: 139 K--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
C + +D + L+ IQQRNLE+A V+DR GLI+EIF A T+E
Sbjct: 82 AAICEVE------HIDVAVFDDQLTPIQQRNLEKALKVKVVDRTGLILEIFARRARTREG 135
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
+LQ ELA L Y++SRLVR T E R GG G G GET++++
Sbjct: 136 RLQVELARLDYERSRLVRT------WTHLE-----------RQRGGTGSTGGPGETQIEI 178
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I L ++EEVRRTR + R+AR++ TVA+VGYTNAGKSTL +
Sbjct: 179 DRRLIAGTILKLKKELEEVRRTRTLHRSARKKVP------YPTVALVGYTNAGKSTLFNR 232
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVE 376
L+++++ + LFATLDP L++V LP GR ++SDTVGFISDLP +LV+AF ATLEEV E
Sbjct: 233 LTEAEVLAKDMLFATLDPTLRTVKLPDGRPAIMSDTVGFISDLPHELVEAFRATLEEVQE 292
Query: 377 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 436
AD+++HV D P+ E V VL ++GV+ ++ K ++EVWNK+D E+ D E ++
Sbjct: 293 ADVVLHVRDVANPDSEAQARDVETVLAELGVTLDEGKTVVEVWNKVDLLSED--DREIVE 350
Query: 437 G 437
G
Sbjct: 351 G 351
>gi|374575494|ref|ZP_09648590.1| GTP-binding protein HflX [Bradyrhizobium sp. WSM471]
gi|374423815|gb|EHR03348.1| GTP-binding protein HflX [Bradyrhizobium sp. WSM471]
Length = 460
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 185/304 (60%), Gaps = 27/304 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I E ++ + ++ L+ IQQRNLE+ VLDR GLI+
Sbjct: 80 RPATYIGKGKVEEIAALAKSLE----VELVVMDCALAPIQQRNLEKELQAKVLDRTGLIL 135
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y++SRLVR T E R GG G
Sbjct: 136 EIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 178
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER S L ++++V+ TR + RA R+R VA+VG
Sbjct: 179 FMGGPGETQIEADRRLIQERISKLEGELKKVQATRRLHRAGRQRVP------YRVVALVG 232
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP QLV
Sbjct: 233 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLV 292
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EAD+++HV D + + E ++ V VL+Q+G++ + +IEVWNKID
Sbjct: 293 AAFRATLEEVLEADVILHVRDISHDDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDR 352
Query: 425 HDEE 428
+ E
Sbjct: 353 YGPE 356
>gi|400754356|ref|YP_006562724.1| GTP-binding protein HflX [Phaeobacter gallaeciensis 2.10]
gi|398653509|gb|AFO87479.1| GTP-binding protein HflX [Phaeobacter gallaeciensis 2.10]
Length = 423
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 194/324 (59%), Gaps = 29/324 (8%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP V+ + ++ KA A FG G ++ +K + E ++ + ++ +S +QQRN
Sbjct: 40 LPDIEVIGSAVVRLPKAHAGMLFGSGKIDELKARFHDEE----VELVLIDGPVSPVQQRN 95
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 96 LEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE- 148
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAAR
Sbjct: 149 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLDKVVKTRTLHRAARA 198
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKV 347
+ VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP G ++
Sbjct: 199 KIP------YPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVQLPDGPEI 252
Query: 348 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 407
+LSDTVGFISDLP +LV AF ATLEEV+ AD++VHV D + + V +L +GV
Sbjct: 253 ILSDTVGFISDLPTELVAAFRATLEEVLAADVVVHVRDISHDETQNQAADVESILASLGV 312
Query: 408 SEEKLKNMIEVWNKIDYHDEEMGD 431
+ + + +EVWNK+D D+E +
Sbjct: 313 DDSRAR--LEVWNKLDLLDDEQAE 334
>gi|414162676|ref|ZP_11418923.1| GTP-binding protein HflX [Afipia felis ATCC 53690]
gi|410880456|gb|EKS28296.1| GTP-binding protein HflX [Afipia felis ATCC 53690]
Length = 463
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 138/317 (43%), Positives = 188/317 (59%), Gaps = 27/317 (8%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VVV+ + R T+ G G VE I G E++ + ++ LS IQQRNLE+
Sbjct: 69 VVVEALIAPLSEIRPATYLGTGKVE----EILGLIKSHEVELVVMDCALSPIQQRNLEKE 124
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
W VLDR GLI+EIF A T+E LQ ELA L+Y++SRLVR T E
Sbjct: 125 WNVKVLDRTGLILEIFGRRAKTREGTLQVELAHLIYQRSRLVR------SWTHLE----- 173
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I ER + + + +++V+ TR + RA R+R
Sbjct: 174 ------RQRGGFGFMGGPGETQIEADRRMIGERITRIENDLKKVQATRRLHRAGRQRVP- 226
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL + L+ +++ + LFATLDP L+++ LP G K ++SD
Sbjct: 227 -----YRVVALVGYTNAGKSTLFNRLTRAEVQAADMLFATLDPTLRALKLPHGGKAMISD 281
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFISDLP LV AF ATLEEV+EAD+++HV D + + E V QVL+Q+ + +
Sbjct: 282 TVGFISDLPTMLVAAFRATLEEVIEADVILHVRDISHEDAEAQERDVDQVLRQLSIDTDA 341
Query: 412 LKNMIEVWNKIDYHDEE 428
+IEVWNKID E
Sbjct: 342 GHRLIEVWNKIDRFSPE 358
>gi|398831858|ref|ZP_10590033.1| GTP-binding protein HflX [Phyllobacterium sp. YR531]
gi|398211184|gb|EJM97806.1| GTP-binding protein HflX [Phyllobacterium sp. YR531]
Length = 471
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/317 (43%), Positives = 184/317 (58%), Gaps = 31/317 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + ++ R T G G V+ I I E+ EL + V+ L+ +QQRNLE+AW
Sbjct: 79 IVHSDIVQVSAPRPATLLGSGKVDMIAEIIE--ETHAEL--VIVDHALTPVQQRNLEKAW 134
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDR GLI+EIF A TKE LQ ELA L Y+K RLVR T E
Sbjct: 135 NAKVLDRTGLILEIFGRRAQTKEGTLQVELAHLTYQKGRLVR------SWTHLE------ 182
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + E+ + ++E V RTRA+ R+ RR+ H
Sbjct: 183 -----RQRGGGGFLGGPGETQIESDRRALQEKILRIKRELETVVRTRALHRSKRRKVPH- 236
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + L G V+LS
Sbjct: 237 -------PIVALVGYTNAGKSTLFNRMTGAGVVAEDMLFATLDPTLRRIRLEHGEMVILS 289
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGFIS+LP LV AF ATLEEVVEADL++H+ D + P+ V ++ +G+
Sbjct: 290 DTVGFISNLPTHLVAAFRATLEEVVEADLILHIRDISDPDTAAQAEDVHGIMADLGIERG 349
Query: 411 KLKNMIEVWNKIDYHDE 427
K +IEVWNKID DE
Sbjct: 350 DTKRIIEVWNKIDLLDE 366
>gi|16125990|ref|NP_420554.1| GTP-binding protein HflX [Caulobacter crescentus CB15]
gi|13423166|gb|AAK23722.1| GTP-binding protein HflX [Caulobacter crescentus CB15]
Length = 427
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 207/361 (57%), Gaps = 51/361 (14%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L EA+ LA +L D + + + P VV P+ T FG G VE
Sbjct: 21 ARLEEAVGLAVAL--------DLNVVEALVAPLRVV-TPA---------TLFGKGKVEEF 62
Query: 139 K--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
C + +D + L+ IQQRNLE+A V+DR GLI+EIF A T+E
Sbjct: 63 AAICEVE------HIDVAVFDDQLTPIQQRNLEKALKVKVVDRTGLILEIFARRARTREG 116
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
+LQ ELA L Y++SRLVR T E R GG G G GET++++
Sbjct: 117 RLQVELARLDYERSRLVRT------WTHLE-----------RQRGGTGSTGGPGETQIEI 159
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I L ++EEVRRTR + R+AR++ TVA+VGYTNAGKSTL +
Sbjct: 160 DRRLIAGTILKLKKELEEVRRTRTLHRSARKKVP------YPTVALVGYTNAGKSTLFNR 213
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVE 376
L+++++ + LFATLDP L++V LP GR ++SDTVGFISDLP +LV+AF ATLEEV E
Sbjct: 214 LTEAEVLAKDMLFATLDPTLRTVKLPDGRPAIMSDTVGFISDLPHELVEAFRATLEEVQE 273
Query: 377 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 436
AD+++HV D P+ E V VL ++GV+ ++ K ++EVWNK+D E+ D E ++
Sbjct: 274 ADVVLHVRDVANPDSEAQARDVETVLAELGVTLDEGKTVVEVWNKVDLLSED--DREIVE 331
Query: 437 G 437
G
Sbjct: 332 G 332
>gi|220926315|ref|YP_002501617.1| GTP-binding proten HflX [Methylobacterium nodulans ORS 2060]
gi|219950922|gb|ACL61314.1| GTP-binding proten HflX [Methylobacterium nodulans ORS 2060]
Length = 471
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 153/396 (38%), Positives = 214/396 (54%), Gaps = 60/396 (15%)
Query: 72 KPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFG 131
+PP +A+L+EA+ LA ++ D D D + P + R T+ G
Sbjct: 54 RPP---EARLDEAVGLAAAI--------DLDVVDHLMLPVQAI----------RPSTYLG 92
Query: 132 PGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHA 191
G VE I I AES + + ++ LS +QQRNLE+AWG V+DR GLI+EIF A
Sbjct: 93 KGRVEEIAGRI-AAES---VRLVVMDCALSPVQQRNLEKAWGVKVIDRTGLILEIFGRRA 148
Query: 192 HTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGE 251
T+E LQ E A L Y++SRLVR T E R GG GF+ G GE
Sbjct: 149 STREGALQVEHAHLAYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGE 191
Query: 252 TELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKS 311
T+++ RR I ER + + ++E V RTR + R +RRR VA+VGYTNAGKS
Sbjct: 192 TQIEADRRLIQERMTRIERELETVTRTRGLHRQSRRRVP------YPVVALVGYTNAGKS 245
Query: 312 TLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATL 371
TL + L+ +++ ++ LFATLDP +++ LP G +LSDTVGFISDLP L+ AF ATL
Sbjct: 246 TLFNRLTAAEVRAEDLLFATLDPTARAIKLPHGETAILSDTVGFISDLPTMLIAAFRATL 305
Query: 372 EEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGD 431
E+V+EAD L+HV D + + V VL ++G++ E +IEVWNK D D
Sbjct: 306 EDVIEADFLLHVRDMAHEDTQAQGQDVQAVLAELGIAPET-DRIIEVWNKADLLDAP--- 361
Query: 432 VEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 467
+ + + N SR ++PV + + G D
Sbjct: 362 ----ERERLLNLSR----QAGAKPVLISALTGEGTD 389
>gi|114762884|ref|ZP_01442316.1| GTP-binding protein HflX [Pelagibaca bermudensis HTCC2601]
gi|114544494|gb|EAU47501.1| GTP-binding protein HflX [Roseovarius sp. HTCC2601]
Length = 417
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 132/295 (44%), Positives = 182/295 (61%), Gaps = 29/295 (9%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
FG G +E ++ I+ AE ++ + V+ +S +QQRNLE+ W +LDR GLI+EIF+
Sbjct: 55 LFGTGKIEELREQIHDAE----VELVLVDGPVSPVQQRNLEKEWKVKLLDRTGLILEIFS 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E LQ E+AAL Y+++RLVR T E R GG GF+ G
Sbjct: 111 DRAATREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQRGGLGFVGG 153
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+++ RR I E+ L Q+E V +TR + R AR + VA+VGYTNA
Sbjct: 154 PGETQIEADRRAIDEQLVRLRRQLERVVKTRDLHRKARAKVP------FPIVALVGYTNA 207
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ +++ + LFATLDP +++V LP+G V+LSDTVGFISDLP +LV AF
Sbjct: 208 GKSTLFNRLTGAEVMAKDMLFATLDPTMRAVKLPTGIDVILSDTVGFISDLPTELVAAFR 267
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEEV+ AD++VHV D + PN EE V +L +GV EE ++E+WNK D
Sbjct: 268 ATLEEVLAADIIVHVRDISHPNTEEQAADVAAILDSLGVDEE--VPLVELWNKTD 320
>gi|49474155|ref|YP_032197.1| GTP-binding protein HflX [Bartonella quintana str. Toulouse]
gi|49239659|emb|CAF26030.1| GTP-binding protein hflX [Bartonella quintana str. Toulouse]
Length = 447
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 205/380 (53%), Gaps = 45/380 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G V+ + +I+G ++ ++ L+ +QQRNLE+ W V+DR LI+EIF
Sbjct: 75 TLLRKGKVDVLAHYISGYN----IELAIIDHFLTPVQQRNLEKLWNCKVIDRTALILEIF 130
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKE LQ ELA L Y+KSRLVR T E R GG GF+
Sbjct: 131 GDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE-----------RQRGGCGFLG 173
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR + E+ + ++E V +TRA+ RA R++ VA+VGYTN
Sbjct: 174 GPGETQIEADRRLLQEKIIRIRRELETVIKTRALHRAKRKKTSHP------VVALVGYTN 227
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL + LS +D LFATLDP ++ V+LP G+ +LLSDTVGFIS+LP L+ AF
Sbjct: 228 TGKSTLFNRLSGADALEKDMLFATLDPIVRKVILPHGKTILLSDTVGFISNLPTNLIAAF 287
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEEVVEADL++HV D + + H VL+VL +G+ + +++IEVWNKID DE
Sbjct: 288 RATLEEVVEADLILHVRDMSDLDHRAHAQDVLEVLSGLGIDTDDTEHIIEVWNKIDILDE 347
Query: 428 EMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNN 472
+ V + D + A +K E +EC+ +
Sbjct: 348 YALNVLQTSVKTRLNPAVMVSALKSDGLDQLLAAIEKRIFGEMQSIECL--LRPHEMSLI 405
Query: 473 DGFVSEDLGESMNKNHNDYS 492
D F E+ GE + + H+D S
Sbjct: 406 DWF-YENSGEIIQEGHDDGS 424
>gi|338738898|ref|YP_004675860.1| GTPase (HflX) [Hyphomicrobium sp. MC1]
gi|337759461|emb|CCB65290.1| putative GTPase (HflX) [Hyphomicrobium sp. MC1]
Length = 470
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 195/346 (56%), Gaps = 46/346 (13%)
Query: 80 KLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIK 139
+L EA+ LA ++ D D D + P + P R T G G VE IK
Sbjct: 64 RLAEAVGLAKAI--------DLDIIDSAVVP---IAEP-------RPSTLLGSGKVEEIK 105
Query: 140 CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQ 199
+ ++ E+ + V+ ++ +QQRNLE+AW VLDR GLI+EIF A T+E LQ
Sbjct: 106 DRV----AELEIGLVVVDYNITPVQQRNLEKAWNAKVLDRTGLILEIFGERARTREGVLQ 161
Query: 200 AELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRR 259
ELA L Y+K RLVR T E R GG GF+ G GE +++L RR
Sbjct: 162 VELAHLTYQKGRLVRA------WTHLE-----------RQRGGGGFLGGPGEAQIELDRR 204
Query: 260 RILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSD 319
+ +R + + EV +TR + R RR+ VA+VGYTNAGKSTL + ++
Sbjct: 205 MLQDRIDAIKKDLAEVVKTRDLHRKGRRKVP------YPIVAIVGYTNAGKSTLFNKITG 258
Query: 320 SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADL 379
+ + + ++FATLDP ++ V LPS R+++LSDTVGFISDLP LV AF ATLEEVVEADL
Sbjct: 259 AGVVAMDQVFATLDPTMREVKLPSARRIILSDTVGFISDLPTMLVAAFRATLEEVVEADL 318
Query: 380 LVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK-NMIEVWNKIDY 424
++HV D E V +VL ++G+ ++ N++EVWNKID
Sbjct: 319 ILHVRDIAHEETEAQAQDVEKVLSELGIDTLPIESNILEVWNKIDL 364
>gi|83593020|ref|YP_426772.1| small GTP-binding protein domain-containing protein [Rhodospirillum
rubrum ATCC 11170]
gi|83575934|gb|ABC22485.1| Small GTP-binding protein domain [Rhodospirillum rubrum ATCC 11170]
Length = 418
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 139/301 (46%), Positives = 181/301 (60%), Gaps = 27/301 (8%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G VE + I AE+ + + V+ LS IQQRNLERAW V+DR GLI+EIF
Sbjct: 49 TYIGGGAVERM-AGIIAAEA---ISLVVVDTQLSPIQQRNLERAWACKVIDRTGLILEIF 104
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E ++Q ELA L Y++SRLVR T E R GG GF+
Sbjct: 105 GERARTAEGQMQVELAHLTYQRSRLVR------SWTHLE-----------RQRGGVGFLG 147
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++L RR I +R + L +EEVRRTR + R AR R VA+VGYTN
Sbjct: 148 GPGETQIELDRRLIGDRITRLRKDLEEVRRTRGLHREARARVP------YPVVALVGYTN 201
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
+GKSTL + L+ + + LFATLDP ++S+ LPSGRKV+LSDTVGF+SDLP +LV AF
Sbjct: 202 SGKSTLFNRLTAGGVLAKDMLFATLDPTMRSLDLPSGRKVILSDTVGFVSDLPHELVAAF 261
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEEV AD++VHV D + + + V VL+++ + E +IE NKID D
Sbjct: 262 RATLEEVKAADVIVHVRDIAGIDSDAQKADVEVVLREMELDERVESGLIEALNKIDLLDS 321
Query: 428 E 428
E
Sbjct: 322 E 322
>gi|260433544|ref|ZP_05787515.1| GTP-binding protein HflX [Silicibacter lacuscaerulensis ITI-1157]
gi|260417372|gb|EEX10631.1| GTP-binding protein HflX [Silicibacter lacuscaerulensis ITI-1157]
Length = 423
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 139/348 (39%), Positives = 201/348 (57%), Gaps = 46/348 (13%)
Query: 81 LNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKC 140
L+EA+ LA +L D D E +V+ P + G FG G +E +
Sbjct: 30 LDEAVALAAALP-------DLDVIGSE-----IVRLPRAQPG-----LLFGSGKIEELGA 72
Query: 141 HINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQA 200
++ E++ + ++ ++ +QQRNLE+AW +LDR GLI+EIF+ A T+E LQ
Sbjct: 73 RF----AENEIELVLIDGPVTPVQQRNLEKAWKVKILDRTGLILEIFSDRARTREGVLQV 128
Query: 201 ELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRR 260
E+AAL Y+++RLVR T E R GG GF+ G GET+++ RR
Sbjct: 129 EMAALSYQRTRLVRA------WTHLE-----------RQRGGLGFVGGPGETQIEADRRA 171
Query: 261 ILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDS 320
I ++ L Q+++V +TR + RAAR + VA+VGYTNAGKSTL + L+ +
Sbjct: 172 IDDQLVRLRRQLQKVVKTRTLHRAARAKVP------YPIVALVGYTNAGKSTLFNRLTGA 225
Query: 321 DLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLL 380
++ + LFATLDP ++ + LP G +V+LSDTVGFIS+LP +LV AF ATLEEV+ ADL+
Sbjct: 226 EVMAKDMLFATLDPTMRRIELPDGPEVILSDTVGFISNLPTELVAAFRATLEEVLAADLI 285
Query: 381 VHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
VHV D + P EE V +L +GV + + +EVWNKID +E
Sbjct: 286 VHVRDISHPETEEQAEDVRSILASLGVDDT--RPQLEVWNKIDLLSDE 331
>gi|294084362|ref|YP_003551120.1| GTPase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292663935|gb|ADE39036.1| GTPase [Candidatus Puniceispirillum marinum IMCC1322]
Length = 430
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 135/323 (41%), Positives = 192/323 (59%), Gaps = 32/323 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELD--AIFVNAILSGIQQRNLER 170
VV ++ + RA +F G G + + AE D I +N LS +QQRNLE
Sbjct: 40 VVVAETVNISQPRAGSFLGKGYADQL------AEMAEAYDHPLIIINTTLSSVQQRNLET 93
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR LI+EIF A A T +LQ ELAAL +++SRLVR T E
Sbjct: 94 LTSCKVIDRTALILEIFGARAQTHAGRLQVELAALTFQRSRLVR------SWTHLE---- 143
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
R GG GF+ G GE +++L RR +++R + ++ EV RTR +QR R R
Sbjct: 144 -------RQRGGGGFLGGPGERQIELDRRMLMDRVMRIKGELREVERTRHLQRRNRDRSE 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
T+A++GYTNAGKSTL + L+ +D+ S LFATLDP ++ + LPSGR+ +L+
Sbjct: 197 TP------TLALIGYTNAGKSTLFNMLTGADVLSKDMLFATLDPTMRGMKLPSGRRAVLA 250
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV-SE 409
DTVGFIS LP +LV+AF +TLEEVVEAD+LVHV D ++P + E V Q+L+++G+ +E
Sbjct: 251 DTVGFISQLPTELVEAFKSTLEEVVEADILVHVHDASSPMVAEEYADVCQILEELGLDAE 310
Query: 410 EKLKNMIEVWNKIDYHDEEMGDV 432
+ + +I + NK D D+ GD+
Sbjct: 311 MQAERVIHILNKSDKIDDMAGDM 333
>gi|429770952|ref|ZP_19302995.1| GTP-binding protein HflX [Brevundimonas diminuta 470-4]
gi|429183166|gb|EKY24233.1| GTP-binding protein HflX [Brevundimonas diminuta 470-4]
Length = 437
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 184/301 (61%), Gaps = 27/301 (8%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E I I A++ +A+ ++ L+ +QQRNLER W V+DR GLI+EIF
Sbjct: 63 TLIGRGKLEEISALILAADA----EAVVIDDQLTPVQQRNLERFWDIKVIDRTGLILEIF 118
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T+E +LQ ELA L Y++SRLVR T E R GG G
Sbjct: 119 GRRARTREGRLQVELARLEYERSRLVRT------WTHLE-----------RQRGGTGGTG 161
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++L RR I +R L +++EEVRRTR + R AR++ +VA+VGYTN
Sbjct: 162 GPGETQIELDRRMIADRIVRLKAELEEVRRTRGLHRKARKQVP------FPSVALVGYTN 215
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + L+ +++ + LFATLD +++ LP GR +++DTVGF+SDLP +LV++F
Sbjct: 216 AGKSTLFNRLTGAEVMAKDLLFATLDTTQRTIRLPQGRPAIIADTVGFVSDLPHELVESF 275
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEEV EADL++HV D +P+ V VL+Q+ E K + ++EVWNKID +
Sbjct: 276 RATLEEVGEADLILHVRDIASPDSAAQAKDVEAVLEQIPTPEGKTRRILEVWNKIDLLEA 335
Query: 428 E 428
E
Sbjct: 336 E 336
>gi|92117387|ref|YP_577116.1| HSR1-like GTP-binding protein [Nitrobacter hamburgensis X14]
gi|91800281|gb|ABE62656.1| GTP-binding protein HflX [Nitrobacter hamburgensis X14]
Length = 444
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/302 (45%), Positives = 183/302 (60%), Gaps = 27/302 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE + G + D + ++ LS IQQRNLE+AW VLDR GLI+
Sbjct: 65 RPATYLGKGKVE----ELTGLITTEGADLVVMDCALSPIQQRNLEKAWSTKVLDRTGLIL 120
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y++SRLVR T E R GG G
Sbjct: 121 EIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 163
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R L +++++V+ TR + RA R+R VA+VG
Sbjct: 164 FMGGPGETQIEADRRLIGDRIVRLENELKKVQATRRLHRAGRQRVP------YRVVALVG 217
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +++ + LFATLDP L+++ LP G K +LSDTVGFIS+LP QLV
Sbjct: 218 YTNAGKSTLFNRLTRAEVQAADMLFATLDPTLRALALPHGGKAMLSDTVGFISNLPTQLV 277
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EAD+++HV D + + E + V VL+Q+G+ ++EVWNKID
Sbjct: 278 AAFRATLEEVMEADVILHVRDISHEDAEAQQHDVEAVLRQLGIDPGHGARILEVWNKIDR 337
Query: 425 HD 426
D
Sbjct: 338 FD 339
>gi|13470637|ref|NP_102206.1| GTP binding protein-like [Mesorhizobium loti MAFF303099]
gi|14021379|dbj|BAB47992.1| GTP binding protein-like [Mesorhizobium loti MAFF303099]
Length = 431
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/303 (44%), Positives = 178/303 (58%), Gaps = 27/303 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G VE + ++ EL + V+ L+ +QQRNLE+ VLDR GLI+
Sbjct: 53 RPATLLGSGKVEEFAQIVK--DNDAEL--VIVDHPLTPVQQRNLEKELHAKVLDRTGLIL 108
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y+K RLVR T E R GG G
Sbjct: 109 EIFGERARTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGAG 151
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR++ E+ L ++E VRRTR + RA R++ VA+VG
Sbjct: 152 FLGGPGETQIESDRRQLQEKIIKLKHELETVRRTRDLHRAKRKKVP------FPVVAIVG 205
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+ V LP G ++LSDTVGFISDLP L+
Sbjct: 206 YTNAGKSTLFNRLTGADVLAQDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDLPTHLI 265
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEVVEADL++H+ D + P+ V ++L +GV K +IEVWNK+D
Sbjct: 266 AAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVERILADLGVDAGDTKRVIEVWNKVDL 325
Query: 425 HDE 427
DE
Sbjct: 326 LDE 328
>gi|302382897|ref|YP_003818720.1| GTP-binding proten HflX [Brevundimonas subvibrioides ATCC 15264]
gi|302193525|gb|ADL01097.1| GTP-binding proten HflX [Brevundimonas subvibrioides ATCC 15264]
Length = 443
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 179/301 (59%), Gaps = 27/301 (8%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G VE + I AE+ +A ++ L+ +QQRNLE+ W V+DR GLI+EIF
Sbjct: 75 TLFGTGKVEELAALIRAAEA----EAAVIDDDLTPVQQRNLEKEWDCKVIDRTGLILEIF 130
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKE +LQ ELA L Y+KSRLVR T E R GG G
Sbjct: 131 GRRARTKEGRLQVELARLDYEKSRLVRT------WTHLE-----------RQRGGTGSTG 173
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++L RR I +R L ++EEVRRTR + R R++ VA+VGYTN
Sbjct: 174 GPGETQIELDRRLIADRIVKLKGELEEVRRTRGLHRKQRKKAP------FPAVALVGYTN 227
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + L+ S++ + LFATLD +++ LP GR +++DTVGFISDLP +LV++F
Sbjct: 228 AGKSTLFNRLTGSEVLAKDLLFATLDTTQRTIRLPQGRPAIIADTVGFISDLPHELVESF 287
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEEV EADL++HV D + + V VL+Q+ E K + ++EVWNK D D
Sbjct: 288 RATLEEVGEADLILHVRDIASADTAAQAKDVEDVLKQIEQPEGKPRRILEVWNKTDLLDP 347
Query: 428 E 428
E
Sbjct: 348 E 348
>gi|349699566|ref|ZP_08901195.1| GTP-binding GTPase [Gluconacetobacter europaeus LMG 18494]
Length = 436
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 189/316 (59%), Gaps = 31/316 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VVV L R T G G V+++K + + + +++ L+ +QQRNLERA
Sbjct: 47 VVVCQAVLLLRARRPATLLGGGQVDSLKETVKA----DNITVVIIDSRLTPVQQRNLERA 102
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR LI++IF A T+E LQ ELA L Y++SRLVR T E
Sbjct: 103 LGCKVIDRTALILDIFGERAATREGTLQVELAHLEYQRSRLVRT------WTHLE----- 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + R ARRR
Sbjct: 152 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRQARRRVP- 204
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++ + LPSGR+V+LSD
Sbjct: 205 -----FPIVALVGYTNAGKSTLFNALTGASVYAQDQLFATLDPTMRGIQLPSGRRVILSD 259
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 407
TVGFISDLP +L+ AF ATLEEV EAD+++HV D + P+ R V++VL+ + +
Sbjct: 260 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVSHPDSASQRNDVIEVLEGMARNGTI 319
Query: 408 SEEKLKNMIEVWNKID 423
++ +IEV NK D
Sbjct: 320 EQDWQSRVIEVLNKAD 335
>gi|403530433|ref|YP_006664962.1| GTP-binding protein hflX [Bartonella quintana RM-11]
gi|403232505|gb|AFR26248.1| GTP-binding protein hflX [Bartonella quintana RM-11]
Length = 447
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 206/380 (54%), Gaps = 45/380 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G V+ + +I S+ ++ ++ L+ +QQRNLE+ W V+DR LI+EIF
Sbjct: 75 TLLRKGKVDVLAHYI----SEYNIELAIIDHFLTPVQQRNLEKLWNCKVIDRTALILEIF 130
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKE LQ ELA L Y+KSRLVR T E R GG GF+
Sbjct: 131 GDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE-----------RQRGGCGFLG 173
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR + E+ + ++E V +TRA+ RA R++ VA+VGYTN
Sbjct: 174 GPGETQIEADRRLLQEKIIRIRRELETVIKTRALHRAKRKKTSHP------VVALVGYTN 227
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL + LS +D + LFATLDP ++ V+LP G+ +LLSDTVGFIS+LP L+ AF
Sbjct: 228 TGKSTLFNRLSGADALAKDMLFATLDPIVRKVILPHGKTILLSDTVGFISNLPTNLIAAF 287
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEEVVEADL++HV D + + H VL+VL +G+ + +++IEVWNKID DE
Sbjct: 288 RATLEEVVEADLILHVRDMSDLDHRAHAQDVLEVLSGLGIDTDDTEHIIEVWNKIDILDE 347
Query: 428 EMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNN 472
+ V + D + A +K E +EC+ +
Sbjct: 348 YALNVLQTSVKTRLNPAVMVSALKSDGLDQLLAAIEKRIFGEMQSIECL--LRPHEMSLI 405
Query: 473 DGFVSEDLGESMNKNHNDYS 492
D F E+ GE + + H+D S
Sbjct: 406 DWF-YENSGEIIQEGHDDGS 424
>gi|148553179|ref|YP_001260761.1| HSR1-like GTP-binding protein [Sphingomonas wittichii RW1]
gi|148498369|gb|ABQ66623.1| GTP-binding protein, HSR1-related [Sphingomonas wittichii RW1]
Length = 442
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 210/393 (53%), Gaps = 62/393 (15%)
Query: 51 VTLFNRDPDDP----PRLFLVQPRLKP--PTFLQAKLNEALCLANSLEEQRDGYFDTDFF 104
+++FNRD DD R + P P +A+L+EA LA ++ D
Sbjct: 1 MSVFNRDEDDGLSRGARALVALPERSGDNPRSAEARLDEAAGLAAAI--------GVDVV 52
Query: 105 DKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQ 164
DK + + + T FG G V+ I A +GE + I V+A L+ IQ
Sbjct: 53 DK----------LAFRLRDPKPATLFGSGQVDQIAL----AARQGEAELIIVDAALTPIQ 98
Query: 165 QRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTF 224
QRNLE+A V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T
Sbjct: 99 QRNLEKATEAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTH 152
Query: 225 GETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRA 284
E R GG GF+ G GET+++ RR I +R + L ++E+VRRTR + RA
Sbjct: 153 LE-----------RQRGGFGFLGGPGETQIEADRRLIRDRMAKLRRELEQVRRTRGLHRA 201
Query: 285 ARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG 344
R+R +A+VGYTNAGKSTL + ++ + + ++ LFATLDP ++ + LP
Sbjct: 202 RRQRAP------WPVIALVGYTNAGKSTLFNRMTGAKVMAEDLLFATLDPTMRQISLPGL 255
Query: 345 RKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 404
K +LSDTVGF+SDLP QLV AF ATLEEV AD+++HV D + P+ + VL VL +
Sbjct: 256 DKAILSDTVGFVSDLPTQLVAAFRATLEEVTGADIILHVRDISHPDSDAQAGDVLAVLGE 315
Query: 405 VGVSEEKLKN-----------MIEVWNKIDYHD 426
+GV + ++EVWNKID D
Sbjct: 316 IGVGPRAPEGHGSGEAGEGAPILEVWNKIDMLD 348
>gi|15965218|ref|NP_385571.1| GTP-binding protein [Sinorhizobium meliloti 1021]
gi|384529177|ref|YP_005713265.1| GTP-binding proten HflX [Sinorhizobium meliloti BL225C]
gi|384536541|ref|YP_005720626.1| putative GTP-binding protein [Sinorhizobium meliloti SM11]
gi|407720406|ref|YP_006840068.1| GTPase HflX [Sinorhizobium meliloti Rm41]
gi|418404377|ref|ZP_12977838.1| putative GTP-binding protein [Sinorhizobium meliloti CCNWSX0020]
gi|15074398|emb|CAC46044.1| Putative GTP-binding protein [Sinorhizobium meliloti 1021]
gi|333811353|gb|AEG04022.1| GTP-binding proten HflX [Sinorhizobium meliloti BL225C]
gi|336033433|gb|AEH79365.1| putative GTP-binding protein [Sinorhizobium meliloti SM11]
gi|359501646|gb|EHK74247.1| putative GTP-binding protein [Sinorhizobium meliloti CCNWSX0020]
gi|407318638|emb|CCM67242.1| GTPase HflX [Sinorhizobium meliloti Rm41]
Length = 465
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 191/320 (59%), Gaps = 32/320 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I H+ + G + V+ L+ +QQRNLE+ W
Sbjct: 71 VVHGMIVSVAQPKPGTLLGTGKIEEI-GHVLSEKDAG---LVIVDHPLTPVQQRNLEKEW 126
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T+E LQ +LA L Y+K RLVR T E
Sbjct: 127 NAKVIDRTGLILEIFGRRASTREGTLQVDLAHLNYQKGRLVR------SWTHLE------ 174
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + +R L ++E+VRRTR + R+ R++ H
Sbjct: 175 -----RQRGGAGFMGGPGETQIEADRRLLQDRIVKLERELEQVRRTRQLHRSKRKKVPH- 228
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LS
Sbjct: 229 -------PIVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILS 281
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 409
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E
Sbjct: 282 DTVGFISDLPTHLVAAFRATLEEVLEADLVLHVRDLSDPDNQAQASDVLRILADLGIDEK 341
Query: 410 EKLKNMIEVWNKIDYHDEEM 429
E + ++EVWNKID + E+
Sbjct: 342 EGAERIVEVWNKIDKVEPEV 361
>gi|402770792|ref|YP_006590329.1| GTP-binding protein, HflX [Methylocystis sp. SC2]
gi|401772812|emb|CCJ05678.1| GTP-binding protein, HflX [Methylocystis sp. SC2]
Length = 443
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/350 (42%), Positives = 196/350 (56%), Gaps = 45/350 (12%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L EA+ LA ++ D D VV Q P + + R T+ G G VE I
Sbjct: 29 ARLMEAVGLAEAI--------DLD---------VVGQVP-VSLNEVRPATYLGKGKVEEI 70
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
+ ++ + ++ LS +QQRNLERAW V+DR GLI+EIF A TKE L
Sbjct: 71 GELVKSKDAA----LVSMDCQLSPVQQRNLERAWDAKVIDRTGLILEIFGERARTKEGAL 126
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y+KSRLVR T E R GG GF+ G GET+++ R
Sbjct: 127 QVELAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIETDR 169
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I ER + +++V+RTRA+ R RR VA+VGYTNAGKSTL + L+
Sbjct: 170 RLIEERMRRIEHDLDKVKRTRALHRKTRR------DIPYPVVALVGYTNAGKSTLFNRLT 223
Query: 319 DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 378
+++ + LFATLDP L+ + LP G ++LLSDTVGFISDLP LV AF ATLEEV AD
Sbjct: 224 KAEVLAQDMLFATLDPTLRQIKLPHGARILLSDTVGFISDLPTMLVSAFRATLEEVTLAD 283
Query: 379 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
+++HV D + E V +L ++G++ E ++EVWNKID D E
Sbjct: 284 VVLHVRDVAHEDWEAQAKDVEAILSELGLTGEAEGRVLEVWNKIDALDPE 333
>gi|334316009|ref|YP_004548628.1| GTP-binding proten HflX [Sinorhizobium meliloti AK83]
gi|334095003|gb|AEG53014.1| GTP-binding proten HflX [Sinorhizobium meliloti AK83]
Length = 465
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 191/320 (59%), Gaps = 32/320 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I H+ + G + V+ L+ +QQRNLE+ W
Sbjct: 71 VVHGMIVSVAQPKPGTLLGTGKIEEI-GHVLSEKDAG---LVIVDHPLTPVQQRNLEKEW 126
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T+E LQ +LA L Y+K RLVR T E
Sbjct: 127 NAKVIDRTGLILEIFGRRASTREGTLQVDLAHLNYQKGRLVR------SWTHLE------ 174
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + +R L ++E+VRRTR + R+ R++ H
Sbjct: 175 -----RQRGGAGFMGGPGETQIEADRRLLQDRIVKLERELEQVRRTRQLHRSKRKKVPH- 228
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LS
Sbjct: 229 -------PIVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILS 281
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 409
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E
Sbjct: 282 DTVGFISDLPTHLVAAFRATLEEVLEADLVLHVRDLSDPDNQAQASDVLRILADLGIDEK 341
Query: 410 EKLKNMIEVWNKIDYHDEEM 429
E + ++EVWNKID + E+
Sbjct: 342 EGAERIVEVWNKIDKVEPEV 361
>gi|86138349|ref|ZP_01056923.1| GTP-binding protein HflX [Roseobacter sp. MED193]
gi|85824874|gb|EAQ45075.1| GTP-binding protein HflX [Roseobacter sp. MED193]
Length = 423
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 196/324 (60%), Gaps = 33/324 (10%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQ 165
LP VV + ++ KA A FG G +E +K H N E+D + ++ +S +QQ
Sbjct: 40 LPDLDVVGSTVVRLPKAHAGMLFGSGKIEELKDLLHSN------EVDLVLIDGPVSPVQQ 93
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 94 RNLEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHL 147
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I ++ +L Q+ +V +TR++ RAA
Sbjct: 148 E-----------RQRGGLGFVGGPGETQIEADRRAIDDQLVNLRRQLAKVVKTRSLHRAA 196
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGR 345
R + VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V +P G
Sbjct: 197 RAKIP------FPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVEMPDGP 250
Query: 346 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 405
+++LSDTVGFISDLP +LV AF ATLEEV+ AD+++HV D + + + V +L +
Sbjct: 251 EIILSDTVGFISDLPTELVAAFRATLEEVLAADVILHVRDISHEDSQNQANDVAAILSTL 310
Query: 406 GVSEEKLKNMIEVWNKIDYHDEEM 429
GV E + + IEVWNK+D E++
Sbjct: 311 GVDETRAQ--IEVWNKLDQLPEDV 332
>gi|384218932|ref|YP_005610098.1| GTP-binding protein HFLX [Bradyrhizobium japonicum USDA 6]
gi|354957831|dbj|BAL10510.1| GTP-binding protein HFLX [Bradyrhizobium japonicum USDA 6]
Length = 459
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 186/304 (61%), Gaps = 27/304 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I + ++ + ++ L+ IQQRNLE+ VLDR GLI+
Sbjct: 80 RPATYIGKGKVEEIAALAKSLD----VELVVMDCALAPIQQRNLEKELHAKVLDRTGLIL 135
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 136 EIFGRRAKTREGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 178
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER S L ++++V+ TR + RA R+R VA+VG
Sbjct: 179 FMGGPGETQIEADRRLIQERISKLEGELKKVQATRRLHRAGRQRVP------YRVVALVG 232
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP G K +LSDTVGFIS+LP QLV
Sbjct: 233 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLV 292
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEV+EA++++HV D + + E ++ V VL+Q+G++ + +IEVWNKID
Sbjct: 293 AAFRATLEEVLEANVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDR 352
Query: 425 HDEE 428
+D E
Sbjct: 353 YDAE 356
>gi|433613238|ref|YP_007190036.1| GTP-binding protein HflX [Sinorhizobium meliloti GR4]
gi|429551428|gb|AGA06437.1| GTP-binding protein HflX [Sinorhizobium meliloti GR4]
Length = 465
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 191/320 (59%), Gaps = 32/320 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I H+ + G + V+ L+ +QQRNLE+ W
Sbjct: 71 VVHGMIVPVAQPKPGTLLGTGKIEEI-GHVLSEKDAG---LVIVDHPLTPVQQRNLEKEW 126
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T+E LQ +LA L Y+K RLVR T E
Sbjct: 127 NAKVIDRTGLILEIFGRRASTREGTLQVDLAHLNYQKGRLVR------SWTHLE------ 174
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + +R L ++E+VRRTR + R+ R++ H
Sbjct: 175 -----RQRGGAGFMGGPGETQIEADRRLLQDRIVKLERELEQVRRTRQLHRSKRKKVPH- 228
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP GR V+LS
Sbjct: 229 -------PIVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILS 281
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 409
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E
Sbjct: 282 DTVGFISDLPTHLVAAFRATLEEVLEADLVLHVRDLSDPDNQAQASDVLRILADLGIDEK 341
Query: 410 EKLKNMIEVWNKIDYHDEEM 429
E + ++EVWNKID + E+
Sbjct: 342 EGAERIVEVWNKIDKVEPEV 361
>gi|357025717|ref|ZP_09087833.1| GTP-binding proten HflX [Mesorhizobium amorphae CCNWGS0123]
gi|355542382|gb|EHH11542.1| GTP-binding proten HflX [Mesorhizobium amorphae CCNWGS0123]
Length = 463
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 180/315 (57%), Gaps = 27/315 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G VE + +G + + V+ L+ +QQRNLE+ VLDR GLI+
Sbjct: 85 RPATLLGSGKVEEFAEIVK----EGHAEVVIVDHPLTPVQQRNLEKELNAKVLDRTGLIL 140
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y+K RLVR T E R GG G
Sbjct: 141 EIFGERARTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGAG 183
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR + ++ L ++E VRRTR + RA R++ VA+VG
Sbjct: 184 FLGGPGETQIESDRRILQDKIIKLKHELETVRRTRDLHRAKRKK------VPFPVVAIVG 237
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL + L+ + + ++ LFATLDP L+ V LP G ++LSDTVGFISDLP LV
Sbjct: 238 YTNAGKSTLFNKLTGAGVLAEDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDLPTHLV 297
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEEVVEADL++H+ D + P+ V ++L +GV K +IEVWNKID
Sbjct: 298 AAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVERILADLGVDAGDTKRVIEVWNKIDL 357
Query: 425 HDEEMGDVEYIDGDD 439
DE DG+D
Sbjct: 358 LDEGNRARLLADGND 372
>gi|153009537|ref|YP_001370752.1| GTP-binding protein HSR1-like [Ochrobactrum anthropi ATCC 49188]
gi|151561425|gb|ABS14923.1| GTP-binding protein HSR1-related [Ochrobactrum anthropi ATCC 49188]
Length = 472
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/352 (40%), Positives = 196/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G VE+
Sbjct: 58 EARLEEAVGLARAIN-----------LDIEHAEIAIVANP-------RPATLLGAGKVES 99
Query: 138 IKCHINGAESKGE--LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
I AE+ E + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 I------AETVKEKAIGLVIVDHALTPVQQRNLEKEWNVKVIDRTGLILEIFGERARTKE 153
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 154 GALQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIE 196
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + ++ + ++E V RTR + R RR+ VA+VGYTNAGKSTL +
Sbjct: 197 ADRRLLQDKILKIKRELETVVRTRTLHRQKRRKVPHP------IVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ +++ ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAEVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + K ++E+WNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVESILSGLGIEPQDRKRVVEIWNKIDNLDE 362
>gi|444308442|ref|ZP_21144087.1| HSR1-like GTP-binding protein [Ochrobactrum intermedium M86]
gi|443488025|gb|ELT50782.1| HSR1-like GTP-binding protein [Ochrobactrum intermedium M86]
Length = 472
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 195/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G VE+
Sbjct: 58 EARLEEAMGLARAIA-----------LDIEHAEIAIVANP-------RPATLLGAGKVES 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAETVQ----EKAIGLVIVDHALTPVQQRNLEKEWNVKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + ++ + ++E V RTR + R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQDKILKIKRELETVVRTRTLHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ +++ ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAEVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + K ++E+WNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVESILAGLGIEPQDRKRVVEIWNKIDNLDE 362
>gi|239831858|ref|ZP_04680187.1| GTP-binding proten HflX [Ochrobactrum intermedium LMG 3301]
gi|239824125|gb|EEQ95693.1| GTP-binding proten HflX [Ochrobactrum intermedium LMG 3301]
Length = 472
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 195/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G VE+
Sbjct: 58 EARLEEAMGLARAIA-----------LDIEHAEIAIVANP-------RPATLLGAGKVES 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAETVQ----EKAIGLVIVDHALTPVQQRNLEKEWNVKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + ++ + ++E V RTR + R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQDKILKIKRELETVVRTRTLHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ +++ ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAEVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + K ++E+WNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVESILAGLGIEPQDRKRVVEIWNKIDNLDE 362
>gi|404319234|ref|ZP_10967167.1| GTP-binding protein HSR1-like [Ochrobactrum anthropi CTS-325]
Length = 472
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/352 (40%), Positives = 196/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G VE+
Sbjct: 58 EARLEEAVGLARAIN-----------LDIEHAEIAIVANP-------RPATLLGAGKVES 99
Query: 138 IKCHINGAESKGE--LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
I AE+ E + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 I------AETVKEKAIGLVIVDHALTPVQQRNLEKEWNVKVIDRTGLILEIFGERARTKE 153
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 154 GALQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIE 196
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + ++ + ++E V RTR + R RR+ VA+VGYTNAGKSTL +
Sbjct: 197 ADRRLLQDKILKIKRELETVVRTRTLHRQKRRKVPHP------IVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ +++ ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAEVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + K ++E+WNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVESILSGLGIEPQDRKRVVEIWNKIDNLDE 362
>gi|170747912|ref|YP_001754172.1| GTP-binding proten HflX [Methylobacterium radiotolerans JCM 2831]
gi|170654434|gb|ACB23489.1| GTP-binding proten HflX [Methylobacterium radiotolerans JCM 2831]
Length = 470
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/389 (38%), Positives = 213/389 (54%), Gaps = 50/389 (12%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVE 136
++A+L+EA LA ++E D VV++ ++ + R T+ G G VE
Sbjct: 53 VEARLDEATGLAAAIE-----------LD-------VVESLAISLPRIRPSTYLGKGRVE 94
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
I I E + + ++ LS +QQRNLE+AWG V+DR GLI+EIF A T+E
Sbjct: 95 EIAGLIRARE----IGLVVMDCALSPVQQRNLEKAWGAKVIDRTGLILEIFGRRASTREG 150
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
LQ E A L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 151 TLQVEHAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEA 193
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I ER + + ++ V RTR + R +R R VA+VGYTNAGKS+L +A
Sbjct: 194 DRRMIQERMTRIERDLDAVVRTRGLHRQSRARVP------YPIVALVGYTNAGKSSLFNA 247
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVE 376
L+ +++ + LFATLDP ++ LP G V+LSDTVGFISDLP L+ AF ATLE+ +E
Sbjct: 248 LTRAEVTAKDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTPLIAAFRATLEDAIE 307
Query: 377 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 436
AD+L+HV D + + E V VL+++G+ E +IEVWNK D D D E
Sbjct: 308 ADVLLHVRDVSHVDSEAQAEDVGAVLRELGI-ETSADRIIEVWNKADLLD----DDERTR 362
Query: 437 GDDISNFSRAEDKDTTSEPVDVECIDNYG 465
++S +RA + ++ PV V + G
Sbjct: 363 LLNLSGQARARNDRDSAAPVLVSALTGEG 391
>gi|254475433|ref|ZP_05088819.1| GTP-binding proten HflX [Ruegeria sp. R11]
gi|214029676|gb|EEB70511.1| GTP-binding proten HflX [Ruegeria sp. R11]
Length = 423
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/323 (41%), Positives = 192/323 (59%), Gaps = 29/323 (8%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
K LP V+ + ++ KA A FG G +E ++ E++ + ++ +S +QQ
Sbjct: 38 KALPDIEVIGSDVVRLPKAHAGMLFGSGKIEELRDQFKA----NEVELVLIDGPVSPVQQ 93
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 94 RNLEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHL 147
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAA
Sbjct: 148 E-----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLDKVVKTRTLHRAA 196
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGR 345
R + VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP G
Sbjct: 197 RAKVP------YPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVELPDGP 250
Query: 346 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 405
+++LSDTVGFISDLP +LV AF ATLEEV+ AD++VHV D + + V +L +
Sbjct: 251 EIILSDTVGFISDLPTELVAAFRATLEEVLAADVVVHVRDISHEESQNQADDVEAILTSL 310
Query: 406 GVSEEKLKNMIEVWNKIDYHDEE 428
GV + + + IEVWNK+D E+
Sbjct: 311 GVDDSRAR--IEVWNKLDLLSED 331
>gi|410943656|ref|ZP_11375397.1| GTP-binding protein HflX [Gluconobacter frateurii NBRC 101659]
Length = 435
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/365 (40%), Positives = 205/365 (56%), Gaps = 47/365 (12%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ ++ R T G G VE + A ++D + V+A LS QQRNLE+A
Sbjct: 48 VIVRQAAILLRARRPATLLGSGQVE----QLAEAVKLDQVDVVIVDARLSPGQQRNLEKA 103
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR GLI++IF A A T+E LQ ELA L Y++SRLVR+ T E
Sbjct: 104 LGCKVMDRTGLILDIFGARAATREGVLQVELAHLEYQRSRLVRL------WTHLE----- 152
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR + ER + ++E+VRRTR + R AR+R
Sbjct: 153 ------RQRGGFGFLGGPGETQMEADRRMLAERIGKIKQELEKVRRTRGLHRDARKRVP- 205
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL +AL+ + + + +LFATLDP ++++ LPSGR V+LSD
Sbjct: 206 -----FPIVALVGYTNAGKSTLFNALTGASVHAQDQLFATLDPTMRALRLPSGRNVILSD 260
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV---GVS 408
TVGFISDLP +L+ AF ATLEEV +AD+++HV D P+ R VL VL + G+
Sbjct: 261 TVGFISDLPTELIAAFRATLEEVSQADVILHVRDIAHPDSAAQRADVLNVLDGMVRDGML 320
Query: 409 EEKL-KNMIEVWNKIDYHDEEMGDVE------------YIDGDDISNFSRAEDKDTTSEP 455
+ + + IEV NK D MG VE I GD I + D+ T
Sbjct: 321 DAQWPERTIEVLNKADL----MGGVEAVPKRENAVAISAITGDGIPDLFETLDQYLTQAM 376
Query: 456 VDVEC 460
+D+
Sbjct: 377 LDIRV 381
>gi|260427894|ref|ZP_05781873.1| GTP-binding protein HflX [Citreicella sp. SE45]
gi|260422386|gb|EEX15637.1| GTP-binding protein HflX [Citreicella sp. SE45]
Length = 417
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 199/350 (56%), Gaps = 43/350 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
FG G +E +K AE ++ + V+ +S +QQRNLE+ W +LDR GLI+EIF+
Sbjct: 55 LFGTGKIEELKTLFEEAE----VELVLVDGPVSPVQQRNLEKQWKVKLLDRTGLILEIFS 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E LQ E+AAL Y+++RLVR T E R GG GF+ G
Sbjct: 111 DRAATREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQRGGLGFVGG 153
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+++ RR I E+ L Q++ V +TR + R AR + VA+VGYTNA
Sbjct: 154 PGETQIEADRRAIDEQLVRLRRQLDRVVKTRDLHRKARAKVP------FPIVALVGYTNA 207
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ +++ + LFATLDP +++V LP+G +V+LSDTVGFISDLP +LV AF
Sbjct: 208 GKSTLFNRLTGAEVMAKDMLFATLDPTMRAVRLPTGIEVILSDTVGFISDLPTELVAAFR 267
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY---- 424
ATLEEV+ AD++VHV D + PN EE V +L +G+ EE + IEVWNKID
Sbjct: 268 ATLEEVLAADVVVHVRDISHPNTEEQSEDVETILASLGLDEEVPR--IEVWNKIDRLHPD 325
Query: 425 ----------HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNY 464
+E++ V + GD + RA E V+ E + +
Sbjct: 326 ERDALLTRAEREEQVYAVSALTGDGLDVMLRAVTDLLQGETVEEELLLGF 375
>gi|296114949|ref|ZP_06833595.1| GTP-binding protein hflX [Gluconacetobacter hansenii ATCC 23769]
gi|295978507|gb|EFG85239.1| GTP-binding protein hflX [Gluconacetobacter hansenii ATCC 23769]
Length = 436
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/316 (42%), Positives = 186/316 (58%), Gaps = 31/316 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V++ L R T G G VE++ + + + +++ L+ +QQRNLERA
Sbjct: 47 VIICKAVLLLRARRPATLLGSGQVESLHATVRA----DNITVVIIDSRLTPVQQRNLERA 102
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR LI++IF A TKE LQ ELA L Y++SRLVR T E
Sbjct: 103 LGCKVIDRTALILDIFGERAATKEGSLQVELAHLEYQRSRLVRT------WTHLE----- 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + R ARRR
Sbjct: 152 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRQARRRVP- 204
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++ + LPSGR+++LSD
Sbjct: 205 -----FPVVALVGYTNAGKSTLFNALTGASVYAQDQLFATLDPTMRGIRLPSGRQIILSD 259
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 407
TVGFISDLP +L+ AF ATLEEV EAD+++HV D + P R V++VL+ + +
Sbjct: 260 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDASHPETSAQRADVVEVLEGMAHSGTI 319
Query: 408 SEEKLKNMIEVWNKID 423
+ +IEV NK D
Sbjct: 320 EPDWQSRVIEVLNKAD 335
>gi|440226582|ref|YP_007333673.1| GTP-binding protein HflX [Rhizobium tropici CIAT 899]
gi|440038093|gb|AGB71127.1| GTP-binding protein HflX [Rhizobium tropici CIAT 899]
Length = 444
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 206/363 (56%), Gaps = 53/363 (14%)
Query: 72 KPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFG 131
+PP +++L EA LA ++ D D + + P + +P R T G
Sbjct: 29 RPP---ESRLEEAKGLALAI--------DLDVVNGSIVP---ISDP-------RPATLLG 67
Query: 132 PGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNA 189
G +E I ++ E +A + V+ L+ +QQRNLE+AW V+DR GLI+EIF
Sbjct: 68 TGKIEEILALLD------EFNAGLVIVDHPLTPVQQRNLEKAWNAKVIDRTGLILEIFGR 121
Query: 190 HAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGA 249
A TKE LQ ELA L Y+K RLVR T E R GG GF+ G
Sbjct: 122 RASTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGAGFMGGP 164
Query: 250 GETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAG 309
GET+++ RR + ER L ++E+V RTR + RA R++ VA+VGYTNAG
Sbjct: 165 GETQIEADRRMLQERIIRLERELEQVVRTRQLHRAKRKKVPHP------IVALVGYTNAG 218
Query: 310 KSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHA 369
KSTL + ++ + + ++ LFATLDP L+ + LP GR V+LSDTVGFISDLP LV AF A
Sbjct: 219 KSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRA 278
Query: 370 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEE 428
TLEEV+EADL++HV D + + + V+++L +G+ E E + ++EVWNKID + E
Sbjct: 279 TLEEVLEADLILHVRDLSDDDNQAQSADVMRILGDLGIGEAEGAERILEVWNKIDRLEPE 338
Query: 429 MGD 431
D
Sbjct: 339 AHD 341
>gi|414342884|ref|YP_006984405.1| GTP-binding proten HflX [Gluconobacter oxydans H24]
gi|411028219|gb|AFW01474.1| GTP-binding proten HflX [Gluconobacter oxydans H24]
Length = 435
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 205/365 (56%), Gaps = 47/365 (12%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ ++ R T G G VE + A ++D + ++A LS QQRNLE+A
Sbjct: 48 VIVRQAAILLRARRPATLLGSGQVE----QLAEAVKLDQVDVVIIDARLSPGQQRNLEKA 103
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR GLI++IF A A T+E LQ ELA L Y++SRLVR+ T E
Sbjct: 104 LGCKVMDRTGLILDIFGARAATREGVLQVELAHLEYQRSRLVRL------WTHLE----- 152
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR + ER + ++E+VRRTR + R AR+R
Sbjct: 153 ------RQRGGFGFLGGPGETQMEADRRMLAERIGKIKKELEQVRRTRGLHRDARKRVP- 205
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL +AL+ + + + +LFATLDP ++++ LPSGR V+LSD
Sbjct: 206 -----FPIVALVGYTNAGKSTLFNALTGASVHAQDQLFATLDPTMRALRLPSGRNVILSD 260
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV---GVS 408
TVGFISDLP +L+ AF ATLEEV +AD+++HV D P+ R VL VL + G+
Sbjct: 261 TVGFISDLPTELIAAFRATLEEVSQADVILHVRDIAHPDSAAQRADVLNVLDGMVRDGML 320
Query: 409 EEKL-KNMIEVWNKIDYHDEEMGDVE------------YIDGDDISNFSRAEDKDTTSEP 455
+ + + IEV NK D MG VE I GD I + D+ T
Sbjct: 321 DAQWPERTIEVLNKADL----MGGVEAVPKRENAVAISAITGDGIPDLFETLDQYLTQAM 376
Query: 456 VDVEC 460
+D+
Sbjct: 377 LDIRV 381
>gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b]
gi|149811066|gb|EDM70903.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b]
Length = 425
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 192/322 (59%), Gaps = 30/322 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV ++ + T FG G +E + I+ E ++ + ++ ++ +QQRN
Sbjct: 41 LPGLDVVGAQVVRVRQPHPGTLFGKGKLEELHALIDAQE----IELVLIDGPVTPVQQRN 96
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 97 LEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHLE- 149
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ L Q+ +V RTR + RAAR
Sbjct: 150 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLSKVVRTRELHRAARA 199
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRK 346
+ VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ + LP G +
Sbjct: 200 K------VPFPIVALVGYTNAGKSTLFNRMTGADVMAKDMLFATLDPTMRRIELPGGGPE 253
Query: 347 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 406
V+LSDTVGFISDLP +LV AF ATLEEV+ ADL+VHV D + P E V +L+ +G
Sbjct: 254 VILSDTVGFISDLPTELVAAFRATLEEVLAADLIVHVRDISHPESEAQARDVRTILESLG 313
Query: 407 VSEEKLKNMIEVWNKIDYHDEE 428
V + + IEVWNKID D+E
Sbjct: 314 VRDSIPQ--IEVWNKIDKLDDE 333
>gi|344924447|ref|ZP_08777908.1| GTPase [Candidatus Odyssella thessalonicensis L13]
Length = 427
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 189/313 (60%), Gaps = 30/313 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V ++ K T G G VE +K I S+ +++ + + L+ +QQRNLE+AW
Sbjct: 41 IVYTQLIQLKKVTPATMIGQGNVEALKEVI----SEHQIELVVFDGPLTPVQQRNLEKAW 96
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A T E +LQ ELAAL Y++SRLVR T E
Sbjct: 97 NCKVIDRTSLILEIFGERARTAEGRLQVELAALTYQRSRLVR------SWTHLE------ 144
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF G GET+L+L RR I ER + +++E+ +RTR++ R+AR
Sbjct: 145 -----RQRGGFGFTGGPGETQLELDRRMIDERIIRIKTELEKTKRTRSLHRSAR------ 193
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + L+ + + + LFATLDP ++ + LPSGR ++LSDT
Sbjct: 194 ADIPYPVVALVGYTNAGKSTLFNKLTHAQVLAKDMLFATLDPTMRQIKLPSGRTIILSDT 253
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS LP QL+ AF ATLEEV ADL++HV DC+ P+ V +VL ++G+ E++L
Sbjct: 254 VGFISHLPTQLIAAFRATLEEVCAADLILHVQDCSHPDSTYQAQEVNKVLTELGL-EKEL 312
Query: 413 KN--MIEVWNKID 423
++ ++ V NKID
Sbjct: 313 EDGTVVNVLNKID 325
>gi|354594033|ref|ZP_09012076.1| GTP-binding protein hflX [Commensalibacter intestini A911]
gi|353673144|gb|EHD14840.1| GTP-binding protein hflX [Commensalibacter intestini A911]
Length = 430
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/351 (41%), Positives = 199/351 (56%), Gaps = 51/351 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
Q++L EA+ LA+S+ + H + N L+S R+ T G G +E+
Sbjct: 32 QSRLEEAIGLASSIRLE--------------ISHTEIIN--LRS--YRSATLIGQGHIES 73
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+K I E+D + LS IQQRNLE+A V+DR LI++IF A TKE
Sbjct: 74 LKDSIQS----NEIDIAIFDTRLSPIQQRNLEKALECKVIDRTALILDIFGERAQTKEGT 129
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 130 LQVELAHLQYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEAD 172
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER L +E+VRRTR + R AR++ VA++GYTNAGKSTL + L
Sbjct: 173 RRLIDERIIRLKKDLEQVRRTRGLHRKARQK------VPFPIVALIGYTNAGKSTLFNNL 226
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ +D+ + +LFATLDP ++ + LPSG+ ++LSDTVGFISDLP +L+ AF ATLEE EA
Sbjct: 227 TGADVHAQDQLFATLDPTMRKLQLPSGKTIILSDTVGFISDLPTELIAAFRATLEETAEA 286
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL-----KNMIEVWNKID 423
D+++HV D + P E R V VL + V ++ L KN IEV NKID
Sbjct: 287 DIILHVRDISHPETTEQRQDVFSVLDTM-VKDQILEADWRKNTIEVLNKID 336
>gi|85703310|ref|ZP_01034414.1| GTP-binding protein HflX [Roseovarius sp. 217]
gi|85672238|gb|EAQ27095.1| GTP-binding protein HflX [Roseovarius sp. 217]
Length = 424
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/324 (42%), Positives = 194/324 (59%), Gaps = 30/324 (9%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
+ LP VV + ++ K A FG G +E ++ A +++ + V+ ++ +QQ
Sbjct: 38 QALPDIDVVGSDVVRLRKPDAGRLFGKGKLE----ELHQAMEAADVELVLVDGPVTPVQQ 93
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 94 RNLEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHL 147
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I ++ L Q+E+V +TR + RAA
Sbjct: 148 E-----------RQRGGLGFVGGPGETQIEADRRAIDDQLVRLRRQLEKVAKTRTLHRAA 196
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SG 344
R + VA+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ V LP G
Sbjct: 197 RAK------VPFPIVALVGYTNAGKSTLFNRLTGADVMAKDMLFATLDPTMRRVALPEGG 250
Query: 345 RKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 404
+V+LSDTVGFISDLP +LV AF ATLEEV+ ADL+ HV D + P V +L+
Sbjct: 251 PEVILSDTVGFISDLPTELVAAFRATLEEVLSADLICHVRDISHPETVSQSRDVAAILES 310
Query: 405 VGVSEEKLKNMIEVWNKIDYHDEE 428
+GVS++ IE+WNKID ++E
Sbjct: 311 LGVSDK--TPQIEIWNKIDQLEDE 332
>gi|453328963|dbj|GAC88839.1| GTP-binding GTPase [Gluconobacter thailandicus NBRC 3255]
Length = 432
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 205/365 (56%), Gaps = 47/365 (12%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ ++ R T G G VE + A ++D + ++A LS QQRNLE+A
Sbjct: 45 VIVRQAAILLRARRPATLLGSGQVE----QLAEAVKLDQVDVVIIDARLSPGQQRNLEKA 100
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR GLI++IF A A T+E LQ ELA L Y++SRLVR+ T E
Sbjct: 101 LGCKVMDRTGLILDIFGARAATREGVLQVELAHLEYQRSRLVRL------WTHLE----- 149
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR + ER + ++E+VRRTR + R AR+R
Sbjct: 150 ------RQRGGFGFLGGPGETQMEADRRMLAERIGKIKKELEQVRRTRGLHRDARKRVP- 202
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL +AL+ + + + +LFATLDP ++++ LPSGR V+LSD
Sbjct: 203 -----FPIVALVGYTNAGKSTLFNALTGASVHAQDQLFATLDPTMRALRLPSGRNVILSD 257
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV---GVS 408
TVGFISDLP +L+ AF ATLEEV +AD+++HV D P+ R VL VL + G+
Sbjct: 258 TVGFISDLPTELIAAFRATLEEVSQADVILHVRDIAHPDSAAQRADVLNVLDGMVRDGML 317
Query: 409 EEKL-KNMIEVWNKIDYHDEEMGDVE------------YIDGDDISNFSRAEDKDTTSEP 455
+ + + IEV NK D MG VE I GD I + D+ T
Sbjct: 318 DAQWPERTIEVLNKADL----MGGVEAVPKRENAVAISAITGDGIPDLFETLDQYLTQAM 373
Query: 456 VDVEC 460
+D+
Sbjct: 374 LDIRV 378
>gi|163849524|ref|YP_001637567.1| GTP-binding proten HflX [Methylobacterium extorquens PA1]
gi|163661129|gb|ABY28496.1| GTP-binding proten HflX [Methylobacterium extorquens PA1]
Length = 474
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 180/315 (57%), Gaps = 28/315 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VVQ L K R T+ G G VE I I E + + ++ LS +QQRNLE+AW
Sbjct: 73 VVQAIPLNLPKIRPSTYLGKGRVEEIAGLIKALE----IGLVVMDCALSPVQQRNLEKAW 128
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T+E LQ E A L Y+KSRLVR T E
Sbjct: 129 SAKVIDRTGLILEIFGRRASTREGTLQVEHAHLAYQKSRLVR------SWTHLE------ 176
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ER + + ++ V RTR + R +R R
Sbjct: 177 -----RQRGGFGFLGGPGETQIEADRRIIQERMTRIERDLDAVTRTRGLHRKSRAR---- 227
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL +AL+++ + + LFATLDP ++ LP G V+LSDT
Sbjct: 228 --VPYPIVALVGYTNAGKSTLFNALTEAQVVAQDMLFATLDPTARATKLPHGETVILSDT 285
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFISDLP L+ AF ATLE+V+EAD+L+HV D + + E V VL ++G+
Sbjct: 286 VGFISDLPTALIAAFRATLEDVIEADILLHVRDISHADTEAQAEDVGHVLDELGIRSHA- 344
Query: 413 KNMIEVWNKIDYHDE 427
+IEVWNK D D+
Sbjct: 345 DRIIEVWNKADVLDK 359
>gi|121602372|ref|YP_988930.1| GTP-binding proten HflX [Bartonella bacilliformis KC583]
gi|120614549|gb|ABM45150.1| GTP-binding proten HflX [Bartonella bacilliformis KC583]
Length = 457
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 184/320 (57%), Gaps = 30/320 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIK---CHINGAESKGELDAIFVNAILSGIQQRNLE 169
VV + + T FG G VE K H N + + + V+ L+ +QQ NLE
Sbjct: 59 VVHHEIVNITTPHPSTLFGSGKVEEFKQVLSHFN----EPRIAVLIVDYSLTPVQQCNLE 114
Query: 170 RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGE 229
+ W V+DR LI+EIF A TKE LQ ELA L Y+K RLVR T E
Sbjct: 115 KLWNCKVIDRTALILEIFGDRAQTKEGVLQVELAYLSYQKGRLVR------SWTHLE--- 165
Query: 230 AEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
R GG GF+ G GET+++ RR + ++ + +++ V +TRA+ RA R++
Sbjct: 166 --------RQRGGHGFLGGPGETQIEADRRILQDKIVRVRRELKTVIKTRALHRANRKKT 217
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLL 349
+A+VGYTNAGKSTL + LS +++ + LFATLDP L+ + LP G+ VLL
Sbjct: 218 CH------PVIALVGYTNAGKSTLFNRLSGANILTKDMLFATLDPTLRKITLPYGKTVLL 271
Query: 350 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 409
SDTVGFIS+LP L+ AF ATLEEV+EADL++HV D + P+ + H VL++L +G+
Sbjct: 272 SDTVGFISNLPTHLIAAFRATLEEVIEADLIIHVRDISDPDHQFHAQDVLEILSSLGIDI 331
Query: 410 EKLKNMIEVWNKIDYHDEEM 429
+IEVWNKID D+ +
Sbjct: 332 NDKGRIIEVWNKIDILDQHV 351
>gi|421760732|ref|ZP_16197546.1| GTP-binding protein HflX [Bartonella bacilliformis INS]
gi|411174500|gb|EKS44532.1| GTP-binding protein HflX [Bartonella bacilliformis INS]
Length = 458
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 184/320 (57%), Gaps = 30/320 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIK---CHINGAESKGELDAIFVNAILSGIQQRNLE 169
VV + + T FG G VE K H N + + + V+ L+ +QQ NLE
Sbjct: 60 VVHHEIVNITTPHPSTLFGSGKVEEFKQVLSHFN----EPRIAVLIVDYSLTPVQQCNLE 115
Query: 170 RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGE 229
+ W V+DR LI+EIF A TKE LQ ELA L Y+K RLVR T E
Sbjct: 116 KLWNCKVIDRTALILEIFGDRAQTKEGVLQVELAYLSYQKGRLVR------SWTHLE--- 166
Query: 230 AEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
R GG GF+ G GET+++ RR + ++ + +++ V +TRA+ RA R++
Sbjct: 167 --------RQRGGHGFLGGPGETQIEADRRILQDKIVRVRRELKTVIKTRALHRANRKKT 218
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLL 349
+A+VGYTNAGKSTL + LS +++ + LFATLDP L+ + LP G+ VLL
Sbjct: 219 CH------PVIALVGYTNAGKSTLFNRLSGANILTKDMLFATLDPTLRKITLPYGKTVLL 272
Query: 350 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 409
SDTVGFIS+LP L+ AF ATLEEV+EADL++HV D + P+ + H VL++L +G+
Sbjct: 273 SDTVGFISNLPTHLIAAFRATLEEVIEADLIIHVRDISDPDHQFHAQDVLEILSSLGIDI 332
Query: 410 EKLKNMIEVWNKIDYHDEEM 429
+IEVWNKID D+ +
Sbjct: 333 NDKGRIIEVWNKIDILDQHV 352
>gi|254439098|ref|ZP_05052592.1| GTP-binding proten HflX [Octadecabacter antarcticus 307]
gi|198254544|gb|EDY78858.1| GTP-binding proten HflX [Octadecabacter antarcticus 307]
Length = 430
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 217/386 (56%), Gaps = 56/386 (14%)
Query: 63 RLFLVQPRLKPPT---FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSL 119
R +++ P +K ++ L E + LA++L E E+ VV P +
Sbjct: 9 RAYVLHPEIKSDNARRHAKSALEEGVALAHALPEL------------EVAGSQVVSLPKM 56
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
G FG G ++ IK + AE+ + ++ +S +QQRNLE+ WG +LDR
Sbjct: 57 HPG-----MLFGKGKIQEIKGWLEDAEA----GLVLIDGHVSPVQQRNLEKEWGVKLLDR 107
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E R
Sbjct: 108 TGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQ 150
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG GF+ G GET+++ RR I + ++L Q+ +V +TR + R AR +
Sbjct: 151 RGGLGFVGGPGETQVEADRRAIDLQLNNLKKQLSKVVKTRELHRKARAK------VPFPI 204
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
VA+VGYTNAGKSTL + L+ + +F + LFATLDP ++ V LP+G +++SDTVGFISDL
Sbjct: 205 VALVGYTNAGKSTLFNRLTGASVFVEDMLFATLDPTMRKVDLPNGDAIIMSDTVGFISDL 264
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P QLV +F ATLEEV+EAD+++HV D + P + + VL L+Q+ V+ + MIEV
Sbjct: 265 PTQLVASFRATLEEVLEADVILHVRDISHPQSADQKKAVLDTLRQLDVNPD--VPMIEVL 322
Query: 420 NKIDYHDEEMGDVEYI-----DGDDI 440
NKID E D +Y+ DG+++
Sbjct: 323 NKIDLLAPE--DADYLQALHKDGENV 346
>gi|126737691|ref|ZP_01753421.1| GTP-binding protein HflX [Roseobacter sp. SK209-2-6]
gi|126721084|gb|EBA17788.1| GTP-binding protein HflX [Roseobacter sp. SK209-2-6]
Length = 423
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/316 (41%), Positives = 190/316 (60%), Gaps = 29/316 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP V+ + ++ KA A FG G +E + + E ++ + ++ +S +QQRN
Sbjct: 40 LPDLDVIGSNVVRLPKAHAGMLFGSGKIEELSTKLKAEE----IELVLIDGPVSPVQQRN 95
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 96 LEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE- 148
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ L Q+E+V +TR + RAAR
Sbjct: 149 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLEKVAKTRTLHRAARA 198
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKV 347
+ VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP G ++
Sbjct: 199 KVP------YPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVELPDGPEI 252
Query: 348 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 407
+LSDTVGFISDLP +LV AF ATLEEV+ AD+++HV D + + V +L+ +GV
Sbjct: 253 ILSDTVGFISDLPTELVAAFRATLEEVLAADVILHVRDISHDETAKQAEDVASILESLGV 312
Query: 408 SEEKLKNMIEVWNKID 423
+ + + IE+WNK+D
Sbjct: 313 DDSRAQ--IEIWNKLD 326
>gi|149204767|ref|ZP_01881730.1| GTP-binding protein HflX [Roseovarius sp. TM1035]
gi|149141736|gb|EDM29789.1| GTP-binding protein HflX [Roseovarius sp. TM1035]
Length = 424
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/317 (43%), Positives = 191/317 (60%), Gaps = 30/317 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV +++ K A FG G +E ++ A E++ + V+ ++ +QQRN
Sbjct: 40 LPDIDVVGADTVRLRKPDAGRLFGKGKLE----ELHQAMEAAEVELVLVDGPVTPVQQRN 95
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 96 LEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHLE- 148
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I ++ L Q+E+V +TR + RAAR
Sbjct: 149 ----------RQRGGLGFVGGPGETQIEADRRAIDDQLVRLRRQLEKVAKTRTLHRAARA 198
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRK 346
+ VA+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ V LP G +
Sbjct: 199 KV------PFPVVALVGYTNAGKSTLFNRLTGADVMAKDMLFATLDPTMRRVNLPEGGPE 252
Query: 347 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 406
V+LSDTVGFISDLP +LV AF ATLEEV+ ADL+ HV D + P V +L+ +G
Sbjct: 253 VILSDTVGFISDLPTELVAAFRATLEEVLSADLICHVRDISHPETVSQSRDVATILESLG 312
Query: 407 VSEEKLKNMIEVWNKID 423
VS++ + IE+WNKID
Sbjct: 313 VSDKTPQ--IEIWNKID 327
>gi|390448826|ref|ZP_10234443.1| GTP-binding proten HflX [Nitratireductor aquibiodomus RA22]
gi|389665420|gb|EIM76888.1| GTP-binding proten HflX [Nitratireductor aquibiodomus RA22]
Length = 457
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 195/369 (52%), Gaps = 34/369 (9%)
Query: 60 DPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSL 119
DP R ++ P L + A + E+ G + D V V P
Sbjct: 22 DPTRAAVISPVLTSERRAAESSAASSRAAEARHEEAIGLTEAIDLDVAFAEIVSVSTP-- 79
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
R T G G +E I + + + ++ L+ +QQRNLE+A VLDR
Sbjct: 80 -----RPATLLGTGKLEEIAARVEEEAVEVVI----IDHPLTPVQQRNLEKALKAKVLDR 130
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
GLI+EIF A TKE +LQ +LA L Y++ RLVR T E R
Sbjct: 131 TGLILEIFGRRARTKEGRLQVDLAHLEYQRGRLVR------SWTHLE-----------RQ 173
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG GF+ G GET+++ RR++ ER L +E+VRRTR + RA RR+
Sbjct: 174 RGGGGFMGGPGETQIEADRRQLQERIMRLKKDLEQVRRTRDLHRAKRRKVP------FPI 227
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
+A+VGYTNAGKSTL + L+ + + ++ LFATLDP L+ V LP G ++LSDTVGFISDL
Sbjct: 228 IAIVGYTNAGKSTLFNRLTGASVMAEDMLFATLDPTLRRVQLPHGTTIILSDTVGFISDL 287
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P LV AF ATLEEV+EADL+VH+ D + P+ V +L +GV K ++EVW
Sbjct: 288 PTHLVAAFRATLEEVIEADLIVHLRDISDPDTAAQAMDVEAILGDLGVDAADRKRVLEVW 347
Query: 420 NKIDYHDEE 428
NKID D E
Sbjct: 348 NKIDSLDPE 356
>gi|261219457|ref|ZP_05933738.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261321953|ref|ZP_05961150.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|260924546|gb|EEX91114.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294643|gb|EEX98139.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 472
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 195/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|149184562|ref|ZP_01862880.1| GTPase [Erythrobacter sp. SD-21]
gi|148831882|gb|EDL50315.1| GTPase [Erythrobacter sp. SD-21]
Length = 407
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 184/315 (58%), Gaps = 35/315 (11%)
Query: 123 KARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
+ R + FG G VE I+ C N AE + V+ LS IQQRNLE G+ V+DR
Sbjct: 28 EVRPNLLFGAGQVENIRIACEQNEAE------LVVVDGALSPIQQRNLEEKLGRKVIDRT 81
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLI+EIF A T E +LQ ELA L Y++SRLVR T E R
Sbjct: 82 GLILEIFGERAATAEGRLQVELAHLDYQQSRLVR------SWTHLE-----------RQR 124
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG GF+ G GET+++ RR I +R L ++E+VR+TR + R R R V
Sbjct: 125 GGFGFLGGPGETQIEADRRMIRQRMGRLRKELEQVRKTRGLHRERRERAP------WPVV 178
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
A+VGYTNAGKSTL + L+ +++ ++ LFATLDP ++++ LP K +LSDTVGFISDLP
Sbjct: 179 ALVGYTNAGKSTLFNRLTGAEVMAEDLLFATLDPTMRAISLPGVEKAILSDTVGFISDLP 238
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE----EKLKNMI 416
QLV AF ATLEEV AD++ HV D + + E +T VL+VL+ + V + ++
Sbjct: 239 TQLVAAFRATLEEVTAADVICHVRDISNSSAEAQKTQVLRVLKGLDVIDGDDGTSSIPIL 298
Query: 417 EVWNKIDYHDEEMGD 431
EVWNK D D+E D
Sbjct: 299 EVWNKWDLLDDEKAD 313
>gi|237815534|ref|ZP_04594531.1| GTP-binding proten HflX [Brucella abortus str. 2308 A]
gi|237788832|gb|EEP63043.1| GTP-binding proten HflX [Brucella abortus str. 2308 A]
Length = 505
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 195/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 91 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 132
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 133 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 188
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 189 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 231
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 232 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 283
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 284 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 343
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 344 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 395
>gi|159044115|ref|YP_001532909.1| GTP-binding protein [Dinoroseobacter shibae DFL 12]
gi|157911875|gb|ABV93308.1| GTP-binding protein [Dinoroseobacter shibae DFL 12]
Length = 415
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 186/309 (60%), Gaps = 29/309 (9%)
Query: 119 LKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLD 178
++ K + FG G +E ++ I E+ + ++ +S +QQRNLERAW +LD
Sbjct: 40 VRLSKVQPGLLFGSGKIEELRARIEA----DEIGLVLIDGPVSPVQQRNLERAWKTKILD 95
Query: 179 RVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR 238
GLI+EIF A T+E LQ ELAAL Y+++RLVR T E R
Sbjct: 96 STGLILEIFADRARTREGVLQVELAALAYQRTRLVR------SWTHLE-----------R 138
Query: 239 GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
GG GF+ G GET+++ RR I E + + Q+ +V +TR + RAAR++
Sbjct: 139 QRGGLGFVGGPGETQIEADRRAIDEAVTRIKRQLAKVVKTRELHRAARKKVP------YP 192
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++++ LP G +V+LSDTVGFIS
Sbjct: 193 IVALVGYTNAGKSTLFNHLTGAEVLAKDMLFATLDPTMRALKLPDGLEVILSDTVGFISS 252
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP +LV AF ATLEEV++ADL++HV D P+ V ++L+ +GV +E + MIEV
Sbjct: 253 LPTELVAAFRATLEEVLDADLILHVRDIAHPDSAAQAEDVHKILEALGVKDE--RPMIEV 310
Query: 419 WNKIDYHDE 427
WNK+D E
Sbjct: 311 WNKLDLLPE 319
>gi|265984171|ref|ZP_06096906.1| GTP-binding protein [Brucella sp. 83/13]
gi|306838167|ref|ZP_07471023.1| GTP-binding proten HflX [Brucella sp. NF 2653]
gi|264662763|gb|EEZ33024.1| GTP-binding protein [Brucella sp. 83/13]
gi|306406757|gb|EFM62980.1| GTP-binding proten HflX [Brucella sp. NF 2653]
Length = 472
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 195/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|423166786|ref|ZP_17153489.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI435a]
gi|423170840|ref|ZP_17157515.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI474]
gi|423173078|ref|ZP_17159749.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI486]
gi|423178229|ref|ZP_17164873.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI488]
gi|423180270|ref|ZP_17166911.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI010]
gi|423183402|ref|ZP_17170039.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI016]
gi|423185658|ref|ZP_17172272.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI021]
gi|423188794|ref|ZP_17175404.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI259]
gi|374539418|gb|EHR10922.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI474]
gi|374543017|gb|EHR14501.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI435a]
gi|374543633|gb|EHR15115.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI486]
gi|374545468|gb|EHR16929.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI488]
gi|374548834|gb|EHR20281.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI010]
gi|374549465|gb|EHR20908.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI016]
gi|374558452|gb|EHR29845.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI259]
gi|374559749|gb|EHR31134.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI021]
Length = 482
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 195/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 68 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 109
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 110 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 165
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 166 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 208
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 209 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 260
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 261 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 320
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 321 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 372
>gi|163760113|ref|ZP_02167196.1| GTP-binding protein [Hoeflea phototrophica DFL-43]
gi|162282512|gb|EDQ32800.1| GTP-binding protein [Hoeflea phototrophica DFL-43]
Length = 413
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/309 (43%), Positives = 183/309 (59%), Gaps = 31/309 (10%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T FG G + +K I E+ G + V+ L+ +QQRN+E W V+DR GLI+
Sbjct: 27 RPSTLFGKGKMLEVKGVI---ETTGS-GLVIVDHPLTPVQQRNMETEWKVKVIDRTGLIL 82
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L Y+K RLVR T E R GG G
Sbjct: 83 EIFGRRASTREGVLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGG 125
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAV 302
F+ G GET+++ RR + +R L ++E+VRRTR + RA R++ H VA+
Sbjct: 126 FMGGPGETQIEADRRLLQDRIVKLERELEQVRRTRQLHRAKRKKVPH--------PIVAL 177
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + ++ +++ ++ LFATLDP L+ + LP G V+LSDTVGFIS LP
Sbjct: 178 VGYTNAGKSTLFNRVTGAEVLAEDMLFATLDPTLRRMKLPHGNTVILSDTVGFISSLPTH 237
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEEVVEADL++HV D P+ V ++L+ +G++E + ++EVWNKI
Sbjct: 238 LVAAFRATLEEVVEADLILHVRDMADPDRASQAGDVEEILKSLGLNEGDGRKLVEVWNKI 297
Query: 423 DYHDEEMGD 431
D EE +
Sbjct: 298 DLLSEEAAE 306
>gi|83942367|ref|ZP_00954828.1| GTP-binding protein HflX [Sulfitobacter sp. EE-36]
gi|83846460|gb|EAP84336.1| GTP-binding protein HflX [Sulfitobacter sp. EE-36]
Length = 412
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 190/315 (60%), Gaps = 30/315 (9%)
Query: 110 PHVVVQNPSLKSGK-ARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNL 168
PH+ V+ ++ + A FG G +E ++ AE ++ + V+ ++ +QQRNL
Sbjct: 30 PHLDVEGANIVPLRTVSAGMLFGSGKIEELRLVFEEAE----VELVLVDGPVTPVQQRNL 85
Query: 169 ERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETG 228
E+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 86 EKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALNYQRTRLVRA------WTHLE-- 137
Query: 229 EAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR 288
R GG GF+ G GET+++ RR I E+ L Q+++V +TRA+ RAAR +
Sbjct: 138 ---------RQRGGLGFVGGPGETQIESDRRAIDEQLVRLRRQLDKVVKTRALHRAARAK 188
Query: 289 HGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVL 348
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++S+VLP G +++
Sbjct: 189 VP------FPIVALVGYTNAGKSTLFNRMTGADVMAKDMLFATLDPTMRSLVLPDGPEII 242
Query: 349 LSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS 408
LSDTVGFISDLP +LV AF ATLEEV+ AD++ HV D + E V +L +GV
Sbjct: 243 LSDTVGFISDLPTELVAAFRATLEEVLAADIICHVRDISHAETESQARNVRDILTSLGVP 302
Query: 409 EEKLKNMIEVWNKID 423
++ EVWNK+D
Sbjct: 303 KD--TRSFEVWNKLD 315
>gi|306841837|ref|ZP_07474519.1| GTP-binding proten HflX [Brucella sp. BO2]
gi|306288064|gb|EFM59461.1| GTP-binding proten HflX [Brucella sp. BO2]
Length = 472
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 195/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVANP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|261222277|ref|ZP_05936558.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261314166|ref|ZP_05953363.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317745|ref|ZP_05956942.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261758301|ref|ZP_06002010.1| GTP1/OBG [Brucella sp. F5/99]
gi|265988776|ref|ZP_06101333.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265998241|ref|ZP_06110798.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|340790729|ref|YP_004756194.1| GTP-binding protein HflX [Brucella pinnipedialis B2/94]
gi|260920861|gb|EEX87514.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261296968|gb|EEY00465.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303192|gb|EEY06689.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261738285|gb|EEY26281.1| GTP1/OBG [Brucella sp. F5/99]
gi|262552709|gb|EEZ08699.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264660973|gb|EEZ31234.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|340559188|gb|AEK54426.1| GTP-binding protein HflX [Brucella pinnipedialis B2/94]
Length = 472
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 195/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|62290025|ref|YP_221818.1| GTP-binding protein [Brucella abortus bv. 1 str. 9-941]
gi|82699952|ref|YP_414526.1| ATP/GTP-binding domain-containing protein [Brucella melitensis
biovar Abortus 2308]
gi|189024265|ref|YP_001935033.1| hypothetical protein BAbS19_I10520 [Brucella abortus S19]
gi|260546577|ref|ZP_05822316.1| GTP1/OBG [Brucella abortus NCTC 8038]
gi|260754853|ref|ZP_05867201.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758070|ref|ZP_05870418.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761894|ref|ZP_05874237.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883865|ref|ZP_05895479.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|376273159|ref|YP_005151737.1| GTP-binding proten HflX [Brucella abortus A13334]
gi|62196157|gb|AAX74457.1| GTP-binding protein, hypothetical [Brucella abortus bv. 1 str.
9-941]
gi|82616053|emb|CAJ11089.1| ATP/GTP-binding site motif A (P-loop):GTP1/OBG [Brucella melitensis
biovar Abortus 2308]
gi|189019837|gb|ACD72559.1| GTP1/OBG [Brucella abortus S19]
gi|260095627|gb|EEW79504.1| GTP1/OBG [Brucella abortus NCTC 8038]
gi|260668388|gb|EEX55328.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260672326|gb|EEX59147.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674961|gb|EEX61782.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873393|gb|EEX80462.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|363400765|gb|AEW17735.1| GTP-binding proten HflX [Brucella abortus A13334]
Length = 472
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 195/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|170744002|ref|YP_001772657.1| GTP-binding proten HflX [Methylobacterium sp. 4-46]
gi|168198276|gb|ACA20223.1| GTP-binding proten HflX [Methylobacterium sp. 4-46]
Length = 474
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 215/396 (54%), Gaps = 60/396 (15%)
Query: 72 KPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFG 131
+PP +A+L+EA+ LA ++ D D+ + P + R T+ G
Sbjct: 57 RPP---EARLDEAVGLAAAI--------DLAVVDRLMLPVQAI----------RPSTYLG 95
Query: 132 PGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHA 191
G VE I I AES + + ++ LS +QQRNLE+AWG V+DR G+I+EIF A
Sbjct: 96 KGRVEEIAGRI-AAES---VRLVVMDCALSPVQQRNLEKAWGVKVIDRTGMILEIFGRRA 151
Query: 192 HTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGE 251
T+E LQ E A L Y++SRLVR T E R GG GF+ G GE
Sbjct: 152 STREGALQVEHAHLAYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGE 194
Query: 252 TELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKS 311
T+++ RR I ER + + ++ V RTR + R +RRR VA+VGYTNAGKS
Sbjct: 195 TQIEADRRLIQERMTRIERELGTVTRTRGLHRQSRRRVP------YPIVALVGYTNAGKS 248
Query: 312 TLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATL 371
TL + L+++++ ++ LFATLDP +++ LP G +LSDTVGFISDLP L+ AF ATL
Sbjct: 249 TLFNRLTEAEVRAEDMLFATLDPTARAIKLPHGETAILSDTVGFISDLPTMLIAAFRATL 308
Query: 372 EEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGD 431
E+V+EAD+L+HV D + + V VL ++G++ + +IEVWNK D E
Sbjct: 309 EDVIEADILLHVRDMAHEDTQAQGEDVQAVLAELGIAPQA-DRIIEVWNKADLLGPE--- 364
Query: 432 VEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 467
+ + + N SR T + PV + + G D
Sbjct: 365 ----ERERLLNLSR----QTGTRPVLISALTGEGTD 392
>gi|225627584|ref|ZP_03785621.1| GTP-binding proten HflX [Brucella ceti str. Cudo]
gi|225617589|gb|EEH14634.1| GTP-binding proten HflX [Brucella ceti str. Cudo]
Length = 505
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 195/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 91 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 132
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 133 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 188
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 189 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 231
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 232 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 283
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 284 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 343
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 344 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 395
>gi|261325201|ref|ZP_05964398.1| GTP-binding protein [Brucella neotomae 5K33]
gi|261301181|gb|EEY04678.1| GTP-binding protein [Brucella neotomae 5K33]
Length = 472
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 195/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|297248425|ref|ZP_06932143.1| GTP-binding protein HflX [Brucella abortus bv. 5 str. B3196]
gi|297175594|gb|EFH34941.1| GTP-binding protein HflX [Brucella abortus bv. 5 str. B3196]
Length = 490
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 195/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 76 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 117
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 118 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 173
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 174 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 216
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 217 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 268
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 269 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 328
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 329 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 380
>gi|83953588|ref|ZP_00962309.1| GTP-binding protein HflX [Sulfitobacter sp. NAS-14.1]
gi|83841533|gb|EAP80702.1| GTP-binding protein HflX [Sulfitobacter sp. NAS-14.1]
Length = 412
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 190/315 (60%), Gaps = 30/315 (9%)
Query: 110 PHVVVQNPSLKSGK-ARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNL 168
PH+ V+ ++ + A FG G +E ++ AE ++ + V+ ++ +QQRNL
Sbjct: 30 PHLDVEGANIVPLRTVSAGMLFGSGKIEELRLVFEEAE----VELVLVDGPVTPVQQRNL 85
Query: 169 ERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETG 228
E+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 86 EKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALNYQRTRLVRA------WTHLE-- 137
Query: 229 EAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR 288
R GG GF+ G GET+++ RR I E+ L Q+++V +TRA+ RAAR +
Sbjct: 138 ---------RQRGGLGFVGGPGETQIESDRRAIDEQLVRLRRQLDKVVKTRALHRAARAK 188
Query: 289 HGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVL 348
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++S+VLP G +++
Sbjct: 189 VP------FPIVALVGYTNAGKSTLFNRMTGADVMAKDMLFATLDPTMRSLVLPDGPEII 242
Query: 349 LSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS 408
LSDTVGFISDLP +LV AF ATLEEV+ AD++ HV D + E V +L +GV
Sbjct: 243 LSDTVGFISDLPTELVAAFRATLEEVLAADIICHVRDISHAETESQARNVRDILTSLGVP 302
Query: 409 EEKLKNMIEVWNKID 423
++ EVWNK+D
Sbjct: 303 KD--TRSFEVWNKLD 315
>gi|161619062|ref|YP_001592949.1| GTP-binding protein HSR1-related [Brucella canis ATCC 23365]
gi|163843379|ref|YP_001627783.1| GTP-binding protein HSR1-related [Brucella suis ATCC 23445]
gi|260566354|ref|ZP_05836824.1| GTP1/OBG protein [Brucella suis bv. 4 str. 40]
gi|376276278|ref|YP_005116717.1| GTP1/OBG protein [Brucella canis HSK A52141]
gi|161335873|gb|ABX62178.1| GTP-binding protein HSR1-related [Brucella canis ATCC 23365]
gi|163674102|gb|ABY38213.1| GTP-binding protein HSR1-related [Brucella suis ATCC 23445]
gi|260155872|gb|EEW90952.1| GTP1/OBG protein [Brucella suis bv. 4 str. 40]
gi|363404845|gb|AEW15140.1| GTP1/OBG protein [Brucella canis HSK A52141]
Length = 472
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 195/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|256369537|ref|YP_003107047.1| GTP-binding protein, putative [Brucella microti CCM 4915]
gi|255999699|gb|ACU48098.1| GTP-binding protein, putative [Brucella microti CCM 4915]
Length = 472
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 194/350 (55%), Gaps = 45/350 (12%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR + E+ + ++E V RTRA+ R RR+ VA+VGYTNAGKSTL + +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPHP------IVALVGYTNAGKSTLFNRM 252
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVVEA
Sbjct: 253 TGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVVEA 312
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
DL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 313 DLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|56551244|ref|YP_162083.1| GTP-binding protein HflX [Zymomonas mobilis subsp. mobilis ZM4]
gi|56542818|gb|AAV88972.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ZM4]
Length = 460
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 202/383 (52%), Gaps = 47/383 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + +A T FGPG VE I A E+D + V+ L+ IQQRNLE +
Sbjct: 51 VVSKLAFHLRAPKASTLFGPGQVEQIVT----AARDEEVDLVIVDGPLTPIQQRNLETSL 106
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A T E +LQ ELA L Y+ RLVR T E
Sbjct: 107 DVKVIDRTGLILEIFGARAATAEGRLQVELAHLDYQAGRLVRT------WTHLE------ 154
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L + +V RTR + RA R++
Sbjct: 155 -----RQRGGFGFLGGPGETQIEADRRMIRDRMAKLRRDLAQVTRTRGLHRARRKKAP-- 207
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ + LP K +LSDT
Sbjct: 208 ----WPVVALVGYTNAGKSTLFNRMTGADVMAKDLLFATLDPTMRQITLPGIDKAILSDT 263
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE--- 409
VGF+SDLP QLV AF ATLEEV ADL++HV D + E R V +VL ++G++
Sbjct: 264 VGFVSDLPTQLVAAFRATLEEVTAADLILHVRDIAQEDSESEREDVERVLAEIGIAPVED 323
Query: 410 --EKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 467
E +IE WNK D EE + S + A +D DV I + G+
Sbjct: 324 GGEFAIPVIEAWNKSDLLSEEAHE---------SLAAEAARRD------DVALISAWTGE 368
Query: 468 DADNNDGFVSEDLGESMNKNHND 490
++ VS+ L E+ H D
Sbjct: 369 GIEDLRELVSQRLSEAHRLRHID 391
>gi|167646573|ref|YP_001684236.1| GTP-binding proten HflX [Caulobacter sp. K31]
gi|167349003|gb|ABZ71738.1| GTP-binding proten HflX [Caulobacter sp. K31]
Length = 446
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 203/362 (56%), Gaps = 51/362 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+ +L EA+ LA +L D D + + P +V P+ T FG G +E
Sbjct: 39 RVRLEEAVGLAIAL--------DLDVVETMVAPLRLV-TPA---------TLFGKGKIEE 80
Query: 138 IK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
C + ++D + L+ +QQRNLE+A V+DR GLI+EIF A T+E
Sbjct: 81 FAAICEVE------KIDVAVFDDQLTPVQQRNLEKALNVKVVDRTGLILEIFARRARTRE 134
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
KLQ ELA L Y++SRLVR T E R GG G G GET+++
Sbjct: 135 GKLQVELARLDYERSRLVRT------WTHLE-----------RQRGGTGNTGGPGETQIE 177
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
L RR I + L +++EVRRTR + R+ R++ TVA+VGYTNAGKSTL +
Sbjct: 178 LDRRLIRDNILKLKRELDEVRRTRTLHRSQRKKAP------YPTVALVGYTNAGKSTLFN 231
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
L+ + + + LFATLDP L++V LP GR +LSDTVGFISDLP +LV+AF ATLEEV
Sbjct: 232 RLTHATVVAQDMLFATLDPTLRNVKLPDGRPAILSDTVGFISDLPHELVEAFRATLEEVQ 291
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYI 435
EAD+++HV D P+ + V VL ++ V+ E K +IEVWNKID D E E +
Sbjct: 292 EADVVLHVRDVANPDTDAQARDVQVVLAELKVTAEDGKTIIEVWNKIDLVDGEAR--EIL 349
Query: 436 DG 437
DG
Sbjct: 350 DG 351
>gi|260753127|ref|YP_003226020.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|384411813|ref|YP_005621178.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258552490|gb|ACV75436.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|335932187|gb|AEH62727.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 460
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 202/383 (52%), Gaps = 47/383 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + +A T FGPG VE I A E+D + V+ L+ IQQRNLE +
Sbjct: 51 VVSKLAFHLRAPKASTLFGPGQVEQIVT----AARDEEVDLVIVDGPLTPIQQRNLETSL 106
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A T E +LQ ELA L Y+ RLVR T E
Sbjct: 107 DVKVIDRTGLILEIFGARAATAEGRLQVELAHLDYQAGRLVRT------WTHLE------ 154
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L + +V RTR + RA R++
Sbjct: 155 -----RQRGGFGFLGGPGETQIEADRRMIRDRMAKLRRDLAQVTRTRGLHRARRKKAP-- 207
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ + LP K +LSDT
Sbjct: 208 ----WPVVALVGYTNAGKSTLFNRMTGADVMAKDLLFATLDPTMRQIALPGIDKAILSDT 263
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE--- 409
VGF+SDLP QLV AF ATLEEV ADL++HV D + E R V +VL ++G++
Sbjct: 264 VGFVSDLPTQLVAAFRATLEEVTAADLILHVRDIAQEDSESEREDVERVLAEIGIAPVED 323
Query: 410 --EKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 467
E +IE WNK D EE + S + A +D DV I + G+
Sbjct: 324 GGEFAIPVIEAWNKSDLLSEEAHE---------SLAAEAARRD------DVALISAWTGE 368
Query: 468 DADNNDGFVSEDLGESMNKNHND 490
++ VS+ L E+ H D
Sbjct: 369 GIEDLRELVSQRLSEAHRLRHID 391
>gi|341615350|ref|ZP_08702219.1| GTPase [Citromicrobium sp. JLT1363]
Length = 438
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 180/313 (57%), Gaps = 35/313 (11%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T FG G VE I AE+ + I V+ LS IQQR LE + V+DR GLI+
Sbjct: 53 RPATLFGAGQVEKIGTDAELAEA----ELIIVDGALSAIQQRTLEEQLKRKVIDRTGLIL 108
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T E +LQ ELA L Y+ SRLVR T E R GG G
Sbjct: 109 EIFGERAATAEGRLQVELAHLDYQASRLVR------SWTHLE-----------RQRGGYG 151
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I R S L ++E+VR+TRA+ R R R +A+VG
Sbjct: 152 FLGGPGETQIEADRRMIRTRMSRLRKELEQVRKTRALHRERRTRAP------WPVIALVG 205
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKST+ + L+ +D+ ++ LFATLDP ++++ LP K +LSDTVGFISDLP QLV
Sbjct: 206 YTNAGKSTIFNRLTGADVMAEDLLFATLDPTMRAIGLPGVEKAILSDTVGFISDLPTQLV 265
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV--------SEEKLKNMI 416
AF ATLEEV ADL++HV D P+ +T VL VL+ +GV E + ++
Sbjct: 266 AAFRATLEEVTNADLILHVRDIANPSSAAQKTQVLDVLRGLGVVGAPEEGAEEASVIPIL 325
Query: 417 EVWNKIDYHDEEM 429
EVWNK D ++M
Sbjct: 326 EVWNKWDLLPDDM 338
>gi|397676775|ref|YP_006518313.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|395397464|gb|AFN56791.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 460
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 202/383 (52%), Gaps = 47/383 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + +A T FGPG VE I A E+D + V+ L+ IQQRNLE +
Sbjct: 51 VVSKLAFHLRAPKASTLFGPGQVEQIVT----AARDEEVDLVIVDGPLTPIQQRNLETSL 106
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A T E +LQ ELA L Y+ RLVR T E
Sbjct: 107 DVKVIDRTGLILEIFGARAATAEGRLQVELAHLDYQAGRLVRT------WTHLE------ 154
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L + +V RTR + RA R++
Sbjct: 155 -----RQRGGFGFLGGPGETQIEADRRMIRDRMAKLRRDLAQVTRTRGLHRARRKKAP-- 207
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ + LP K +LSDT
Sbjct: 208 ----WPVVALVGYTNAGKSTLFNRMTGADVMAKDLLFATLDPTMRQIALPGIDKAILSDT 263
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE--- 409
VGF+SDLP QLV AF ATLEEV ADL++HV D + E R V +VL ++G++
Sbjct: 264 VGFVSDLPTQLVAAFRATLEEVTAADLILHVRDIAQEDSESEREDVERVLAEIGIAPVEE 323
Query: 410 --EKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 467
E +IE WNK D EE + S + A +D DV I + G+
Sbjct: 324 GGEFAIPIIEAWNKSDLLSEEAHE---------SLAAEAARRD------DVALISAWTGE 368
Query: 468 DADNNDGFVSEDLGESMNKNHND 490
++ VS+ L E+ H D
Sbjct: 369 GIEDLRELVSQRLSEAHRLRHID 391
>gi|294852449|ref|ZP_06793122.1| GTP-binding protein HflX [Brucella sp. NVSL 07-0026]
gi|294821038|gb|EFG38037.1| GTP-binding protein HflX [Brucella sp. NVSL 07-0026]
Length = 496
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 194/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHFE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLHRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|188582188|ref|YP_001925633.1| GTP-binding proten HflX [Methylobacterium populi BJ001]
gi|179345686|gb|ACB81098.1| GTP-binding proten HflX [Methylobacterium populi BJ001]
Length = 471
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 197/350 (56%), Gaps = 46/350 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L+EA+ LA +++ D V +Q P R T+ G G VE
Sbjct: 54 EARLDEAVGLAAAID-----------LDVARAIAVHLQRP-------RPSTYLGKGRVEE 95
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ I E + + ++ LS +QQRNLE+AWG V+DR GLI+EIF A T+E
Sbjct: 96 VAGLIKAEE----IGLVVMDCALSPVQQRNLEKAWGAKVIDRTGLILEIFGRRASTREGT 151
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ E A L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 152 LQVEHAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 194
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + + ++ V RTR + R +R R VA+VGYTNAGKSTL +AL
Sbjct: 195 RRMIQERMTRIERDLDAVTRTRGLHRKSRARVP------YPIVALVGYTNAGKSTLFNAL 248
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ +++ + LFATLDP ++ LP G V+LSDTVGFISDLP L+ AF ATLE+V+EA
Sbjct: 249 TKAEVRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEA 308
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
D+L+HV D + + + V VL+++G+ E + +IEVWNK D D+
Sbjct: 309 DILLHVRDVSHGDTQAQAEDVEGVLRELGI-EPDAERIIEVWNKADLLDD 357
>gi|399075290|ref|ZP_10751476.1| GTP-binding protein HflX [Caulobacter sp. AP07]
gi|398039210|gb|EJL32350.1| GTP-binding protein HflX [Caulobacter sp. AP07]
Length = 446
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 203/361 (56%), Gaps = 51/361 (14%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L EA+ LA +L D + + + P +V P+ T FG G +E
Sbjct: 40 ARLEEAVGLALAL--------DLNVVETMIAPLRLV-TPA---------TLFGKGKIEEF 81
Query: 139 K--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
C + ++D + L+ +QQRNLERA V+DR GLI+EIF A T+E
Sbjct: 82 AALCEVE------KIDVAVFDDQLTPVQQRNLERALNVKVVDRTGLILEIFARRARTREG 135
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ ELA L Y++SRLVR T E R GG G G GET+++L
Sbjct: 136 KLQVELARLDYERSRLVRT------WTHLE-----------RQRGGTGNTGGPGETQIEL 178
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I + L +++EVRRTR + R+ R++ TVA+VGYTNAGKSTL +
Sbjct: 179 DRRLIRDNILKLKRELDEVRRTRTLHRSQRKKVP------YPTVALVGYTNAGKSTLFNR 232
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVE 376
L+ + + + LFATLDP L++V LP GR +LSDTVGFISDLP +LV+AF ATLEEV E
Sbjct: 233 LTHATVVAQDMLFATLDPTLRNVKLPDGRPAILSDTVGFISDLPHELVEAFRATLEEVQE 292
Query: 377 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 436
AD+++HV D P+ + V VL ++ V+ E K ++EVWNKID D E E +D
Sbjct: 293 ADVVLHVRDVANPDTDAQARDVQAVLAELKVTTEDGKTILEVWNKIDLVDGEAR--EILD 350
Query: 437 G 437
G
Sbjct: 351 G 351
>gi|402849150|ref|ZP_10897390.1| GTP-binding protein HflX [Rhodovulum sp. PH10]
gi|402500463|gb|EJW12135.1| GTP-binding protein HflX [Rhodovulum sp. PH10]
Length = 465
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 199/346 (57%), Gaps = 46/346 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L+EA LA ++ D D VV++ + G R T+ G G VE
Sbjct: 54 EARLDEATGLARAI--------DLD----------VVESGIVLLGAVRPSTYLGKGKVEE 95
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + E+ + ++ LS +QQRNLE+AW V+DR GLI+EIF A T+E
Sbjct: 96 IAGLVKSTEAS----LVVMDCALSPVQQRNLEKAWNAKVVDRTGLILEIFGRRAATREGT 151
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+KSRLVR T E R GG GF+ G GET+L+
Sbjct: 152 LQVELAHLTYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQLETD 194
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I +R + ++ V+RTRA+ R +R+R VA+VGYTNAGKSTL + L
Sbjct: 195 RRIIQDRIRRIEHDLDTVKRTRALHRTSRKRVP------YPIVALVGYTNAGKSTLFNRL 248
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ S + + LFATLDP L++V LP G +V+LSDTVGF+SDLP LV AF ATLEEV+EA
Sbjct: 249 TRSGVLATDMLFATLDPTLRAVDLPDGPRVILSDTVGFVSDLPTMLVAAFRATLEEVIEA 308
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
DL++HV D + + + V VL ++G+ E + ++EVWNKID
Sbjct: 309 DLILHVRDVSHGDTQAQSKDVDTVLAELGIPPEDPR-LLEVWNKID 353
>gi|56696948|ref|YP_167310.1| GTP-binding protein HflX [Ruegeria pomeroyi DSS-3]
gi|56678685|gb|AAV95351.1| GTP-binding protein HflX [Ruegeria pomeroyi DSS-3]
Length = 424
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 218/402 (54%), Gaps = 53/402 (13%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + ++ K FG G VE + + E++ + ++ LS +QQRNLE+AW
Sbjct: 46 VVGSGIVRLPKPHPGHLFGSGKVEELATLFH----DNEVELVLIDGPLSPVQQRNLEKAW 101
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 102 KVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE------ 149
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + R AR +
Sbjct: 150 -----RQRGGLGFVGGPGETQIEADRRAIDEQLVRLKRQLDKVVKTRELHRKARAKVP-- 202
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ VVLP G +V+LSDT
Sbjct: 203 ----YPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVVLPDGPEVILSDT 258
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFISDLP +LV AF ATLEEV+ ADL+VHV D EE V +L +GV E +
Sbjct: 259 VGFISDLPTELVAAFRATLEEVLAADLIVHVRDIHHAATEEQARDVETILASLGVDEGRP 318
Query: 413 KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNN 472
K EVWNK+D D + RA ++ T+ + + G+ ++
Sbjct: 319 K--FEVWNKVDLLDPD---------------KRAALRERTARDPSLFAVSAVTGEGLESL 361
Query: 473 DGFVSEDLGESMNKN--HNDYSDG----WLLSGDEQDNVEEE 508
++E L E+ ++ ++DG WL + QD V+ E
Sbjct: 362 LTAIAEALAETRSEAVLTLGFADGKRRAWLFA---QDVVQAE 400
>gi|393767216|ref|ZP_10355766.1| GTP-binding proten HflX [Methylobacterium sp. GXF4]
gi|392727313|gb|EIZ84628.1| GTP-binding proten HflX [Methylobacterium sp. GXF4]
Length = 473
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 150/393 (38%), Positives = 213/393 (54%), Gaps = 50/393 (12%)
Query: 73 PPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGP 132
P ++A+L+EA LA ++E D VV++ ++ + R T+ G
Sbjct: 52 PTRSVEARLDEATGLAAAIE-----------LD-------VVESLAISLPRIRPSTYLGK 93
Query: 133 GTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAH 192
G VE I I E + + ++ LS +QQRNLE+ WG V+DR GLI+EIF A
Sbjct: 94 GRVEEIAGLIRARE----IGLVVMDCALSPVQQRNLEKEWGAKVIDRTGLILEIFGRRAS 149
Query: 193 TKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGET 252
T+E LQ E A L Y+KSRLVR T E R GG GF+ G GET
Sbjct: 150 TREGTLQVEHAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGET 192
Query: 253 ELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKST 312
+++ RR I ER + + ++ V RTR + R +R R VA+VGYTNAGKS+
Sbjct: 193 QIEADRRMIQERMTRIERDLDAVVRTRGLHRQSRARVP------YPIVALVGYTNAGKSS 246
Query: 313 LVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLE 372
L + L+ +++ + LFATLDP ++ LP G V+LSDTVGFISDLP L+ AF ATLE
Sbjct: 247 LFNTLTRAEVTAKDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTPLIAAFRATLE 306
Query: 373 EVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDV 432
+ +EAD+L+HV D + + E V +VL+++G+ E + +IEVWNK D D D
Sbjct: 307 DAIEADVLLHVRDVSHVDSEAQAEDVGEVLRELGI-ETTAERIIEVWNKSDLLD----DD 361
Query: 433 EYIDGDDISNFSRAEDKDTTSEPVDVECIDNYG 465
E ++S S+A + + PV V + G
Sbjct: 362 ERTRLMNLSGQSKARNDRDSDAPVLVSALTGEG 394
>gi|296284134|ref|ZP_06862132.1| GTPase [Citromicrobium bathyomarinum JL354]
Length = 440
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 179/308 (58%), Gaps = 35/308 (11%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T FG G VE I AE+ + I V+ L+ IQQR LE + V+DR GLI+
Sbjct: 53 RPATLFGAGQVEQIGTQAELAEA----ELIIVDGALTAIQQRTLEEKLARKVIDRTGLIL 108
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T E +LQ ELA L Y+ SRLVR T E R GG G
Sbjct: 109 EIFGERAATAEGRLQVELAHLDYQASRLVR------SWTHLE-----------RQRGGYG 151
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I R + L +E+V++TRA+ R R R +A+VG
Sbjct: 152 FLGGPGETQIEADRRMIRTRMARLRRDLEQVKKTRALHRERRTRAP------WPVIALVG 205
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKST+ + L+ +D+ ++ LFATLDP ++++ LP+ K +LSDTVGFISDLP QLV
Sbjct: 206 YTNAGKSTIFNRLTGADVMAEDLLFATLDPTMRAISLPAVEKAILSDTVGFISDLPTQLV 265
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV------SEEKLKN--MI 416
AF ATLEEV ADL++HV D P +T VL+VL+ +GV EE + + M+
Sbjct: 266 AAFRATLEEVTNADLILHVRDIANPASAAQKTQVLEVLRGLGVVSGGEEGEEPVSSIPML 325
Query: 417 EVWNKIDY 424
EVWNK D
Sbjct: 326 EVWNKWDL 333
>gi|423716770|ref|ZP_17690960.1| GTP-binding protein HflX [Bartonella tamiae Th307]
gi|395428844|gb|EJF94919.1| GTP-binding protein HflX [Bartonella tamiae Th307]
Length = 456
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/351 (38%), Positives = 199/351 (56%), Gaps = 45/351 (12%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVE 136
+Q+K++EA+ LA ++ VV++ ++ R T GPG VE
Sbjct: 42 VQSKIDEAIGLAQAIRLD------------------VVEHHTVTMNTLRPATLLGPGKVE 83
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
I E K E+D ++ L+ +QQRNLE+ W V+DR LI+EIF A TKE
Sbjct: 84 EFSRII---EDK-EIDLAIIDRGLTPVQQRNLEKFWNCKVIDRTALILEIFGDRAATKEG 139
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 140 VLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIES 182
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR++ ++ + +++ V +TRA+ RA R++ +A+VGYTNAGKSTL +
Sbjct: 183 DRRQLQDKIVRIKRELDTVVKTRALHRAKRKKTSHP------VIALVGYTNAGKSTLFNQ 236
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVE 376
L+ +++ + LFATLDP L+ + LP G+ V+LSDTVGFIS+LP L+ AF ATLEEV+E
Sbjct: 237 LTGANVLAKDMLFATLDPTLRRITLPHGQLVILSDTVGFISNLPTHLIAAFRATLEEVIE 296
Query: 377 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ADL++HV D + P+ H V +L+ +GV + ++ E+WNK D D+
Sbjct: 297 ADLILHVRDMSDPDHYIHAQDVRDILKSLGVDIDDHNHIFEIWNKTDLLDD 347
>gi|261214104|ref|ZP_05928385.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260915711|gb|EEX82572.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 472
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 194/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
E DL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 ETDLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|225852611|ref|YP_002732844.1| GTP-binding proten HflX [Brucella melitensis ATCC 23457]
gi|256263896|ref|ZP_05466428.1| GTP-binding protein [Brucella melitensis bv. 2 str. 63/9]
gi|265995027|ref|ZP_06107584.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|384211475|ref|YP_005600557.1| GTP-binding proten HflX [Brucella melitensis M5-90]
gi|384408583|ref|YP_005597204.1| GTP-binding proten HflX [Brucella melitensis M28]
gi|225640976|gb|ACO00890.1| GTP-binding proten HflX [Brucella melitensis ATCC 23457]
gi|262766140|gb|EEZ11929.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263094028|gb|EEZ17962.1| GTP-binding protein [Brucella melitensis bv. 2 str. 63/9]
gi|326409130|gb|ADZ66195.1| GTP-binding proten HflX [Brucella melitensis M28]
gi|326538838|gb|ADZ87053.1| GTP-binding proten HflX [Brucella melitensis M5-90]
Length = 472
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 193/352 (54%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI-----------GLDIEHAEIAIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|384445169|ref|YP_005603888.1| GTP-binding proten HflX [Brucella melitensis NI]
gi|349743160|gb|AEQ08703.1| GTP-binding proten HflX [Brucella melitensis NI]
Length = 505
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 193/352 (54%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G ++
Sbjct: 91 EARLEEAIGLARAIG-----------LDIEHAEIAIVTNP-------RPATLLGAGKAQS 132
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 133 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 188
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 189 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 231
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 232 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 283
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 284 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 343
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 344 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 395
>gi|261755076|ref|ZP_05998785.1| GTP-binding protein [Brucella suis bv. 3 str. 686]
gi|261744829|gb|EEY32755.1| GTP-binding protein [Brucella suis bv. 3 str. 686]
Length = 472
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 194/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A KE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARIKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|85374078|ref|YP_458140.1| GTPase [Erythrobacter litoralis HTCC2594]
gi|84787161|gb|ABC63343.1| GTPase [Erythrobacter litoralis HTCC2594]
Length = 433
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/338 (41%), Positives = 197/338 (58%), Gaps = 43/338 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLER 170
V+++ L + + +T G G VE + C ++ E++ + ++ LS IQQRNLE
Sbjct: 44 VIESYILPIRQVQPNTLLGSGQVERVSTDCELH------EIELVVIDGALSPIQQRNLEE 97
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
+ + V+DR GLI+EIF A T E +LQ ELA L Y++SRLVR T E
Sbjct: 98 KFKRKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQQSRLVR------SWTHLE---- 147
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
R GG GF+ G GET+++ RR I +R L ++E+VR+TR + R R
Sbjct: 148 -------RQRGGFGFLGGPGETQIEADRRMIRQRMGRLRKELEQVRKTRGLHRERR---- 196
Query: 291 GSDGRG-LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLL 349
GR +A+VGYTNAGKSTL + L+ +++ ++ LFATLDP ++++ LP K +L
Sbjct: 197 ---GRAPWPVIALVGYTNAGKSTLFNRLTGAEVMAEDLLFATLDPTMRAIALPGVEKAIL 253
Query: 350 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 409
SDTVGFISDLP QLV AF ATLEEV ADL++HV D + ++ VL+VLQ +GV +
Sbjct: 254 SDTVGFISDLPTQLVAAFRATLEEVTAADLILHVRDIANSSSAAQKSQVLEVLQDLGVID 313
Query: 410 ----EKLKNMIEVWNKIDYHD----EEMGDVEYIDGDD 439
E ++EVWNK D D EE+ V +GDD
Sbjct: 314 GEDGESSIPILEVWNKWDLLDQDSAEELSGVA--EGDD 349
>gi|254464339|ref|ZP_05077750.1| GTP-binding proten HflX [Rhodobacterales bacterium Y4I]
gi|206685247|gb|EDZ45729.1| GTP-binding proten HflX [Rhodobacterales bacterium Y4I]
Length = 423
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 231/425 (54%), Gaps = 58/425 (13%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + ++ KA A FG G +E + G E++ + ++ +S +QQRNLE+AW
Sbjct: 45 VVGSNVVRLPKAHAGMLFGSGKIE----ELAGILKANEIELVLIDGPVSPVQQRNLEKAW 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 101 KVKILDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ++ L Q+++V +TR + RA+R +
Sbjct: 149 -----RQRGGLGFVGGPGETQIEADRRAIDDQLVRLRRQLDKVVKTRTLHRASRAKVP-- 201
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP G +++LSDT
Sbjct: 202 ----YPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVELPDGPEIILSDT 257
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP +LV AF ATLEEV+ AD+++HV D + + ++ V +L +GV E ++
Sbjct: 258 VGFISNLPTELVAAFRATLEEVLAADVILHVRDISHHDSKQQAEDVEAILASLGVDENRV 317
Query: 413 KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTS--EPVDVECIDNYGGDDAD 470
+ IEVWNK+D EE + + RAE +D + E +D D A+
Sbjct: 318 R--IEVWNKLDQLPEEEAE---------ARRQRAEREDGIHAISALTGEGLDGLLADIAE 366
Query: 471 NNDGFVSED---LGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPESTKDVCVM 527
G E+ L + K WL ++D V++E +Q E+ DV V+
Sbjct: 367 KLQGVRHEEVLTLTFAQGKQR-----AWLF---KEDLVQQE-------KQTETGFDVTVL 411
Query: 528 EKDSQ 532
D Q
Sbjct: 412 WTDRQ 416
>gi|395786337|ref|ZP_10466064.1| GTP-binding protein HflX [Bartonella tamiae Th239]
gi|395422635|gb|EJF88831.1| GTP-binding protein HflX [Bartonella tamiae Th239]
Length = 456
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/351 (38%), Positives = 198/351 (56%), Gaps = 45/351 (12%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVE 136
+Q+K++EA+ LA ++ VV++ + R T GPG VE
Sbjct: 42 VQSKIDEAIGLAQAIRLD------------------VVEHHKVTMNTLRPATLLGPGKVE 83
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
I E K E+D ++ L+ +QQRNLE+ W V+DR LI+EIF A TKE
Sbjct: 84 EFSRII---EDK-EIDLAIIDRGLTPVQQRNLEKFWNCKVIDRTALILEIFGDRAATKEG 139
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 140 VLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIES 182
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR++ ++ + +++ V +TRA+ RA R++ +A+VGYTNAGKSTL +
Sbjct: 183 DRRQLQDKIVRIKRELDTVVKTRALHRAKRKKTSHP------VIALVGYTNAGKSTLFNQ 236
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVE 376
L+ +++ + LFATLDP L+ + LP G+ V+LSDTVGFIS+LP L+ AF ATLEEV+E
Sbjct: 237 LTGANVLAKDMLFATLDPTLRRITLPHGQLVILSDTVGFISNLPTHLIAAFRATLEEVIE 296
Query: 377 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ADL++HV D + P+ H V +L+ +GV + ++ E+WNK D D+
Sbjct: 297 ADLILHVRDMSDPDHYIHAQDVRDILKSLGVDIDDHNHIFEIWNKTDLLDD 347
>gi|357032721|ref|ZP_09094656.1| GTP-binding proten HflX [Gluconobacter morbifer G707]
gi|356413712|gb|EHH67364.1| GTP-binding proten HflX [Gluconobacter morbifer G707]
Length = 435
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 205/363 (56%), Gaps = 43/363 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLE 169
V+V+ ++ R T G G VE + ++G +D + ++A LS QQRNLE
Sbjct: 48 VIVRKAAILLRARRPSTLLGSGQVEQLAEAVKLDG------VDVVIIDARLSPGQQRNLE 101
Query: 170 RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGE 229
+A G V+DR GLI++IF A A T+E LQ ELA L Y++SRLVR+ T E
Sbjct: 102 KALGCKVVDRTGLILDIFGARAATREGVLQVELAHLEYQRSRLVRL------WTHLE--- 152
Query: 230 AEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
R GG GF+ G GET+++ RR + ER + ++E+VRRTR + R AR+R
Sbjct: 153 --------RQRGGFGFLGGPGETQMEADRRMLAERIGKIKKELEQVRRTRGLHRDARKRV 204
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLL 349
VA+VGYTNAGKSTL +AL+ + + ++ +LFATLDP ++++ LPSGR V+L
Sbjct: 205 P------FPVVALVGYTNAGKSTLFNALTGASVQAENQLFATLDPTMRALRLPSGRNVIL 258
Query: 350 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV---G 406
SDTVGFIS+LP +LV AF ATLEEV +AD+++HV D P+ R VL VL + G
Sbjct: 259 SDTVGFISELPTELVAAFRATLEEVSQADVILHVRDVAHPDSAAQRADVLHVLDSMVRDG 318
Query: 407 VSEEKL-KNMIEVWNKIDY--------HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
+ + + + IEV NK D E + I G+ I + A D+ T D
Sbjct: 319 MLDAQWPERTIEVLNKADLVGGVQAIPKRENAVAISAITGEGIPDLFEALDQYLTRSMQD 378
Query: 458 VEC 460
V
Sbjct: 379 VRV 381
>gi|306843975|ref|ZP_07476570.1| GTP-binding proten HflX [Brucella inopinata BO1]
gi|306275730|gb|EFM57454.1| GTP-binding proten HflX [Brucella inopinata BO1]
Length = 472
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 194/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+L DTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILLDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|225174625|ref|ZP_03728623.1| GTP-binding proten HflX [Dethiobacter alkaliphilus AHT 1]
gi|225169752|gb|EEG78548.1| GTP-binding proten HflX [Dethiobacter alkaliphilus AHT 1]
Length = 425
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 175/304 (57%), Gaps = 33/304 (10%)
Query: 123 KARADTFF--GPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
+ R D+ F G G E I+ + E+ +L + + LS Q+RNLE A V+DR
Sbjct: 47 RQRPDSAFYVGKGKAEEIRLIVE--ETDAQL--VLFDDELSPSQRRNLEEAVAVRVVDRT 102
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
LI++IF A TKE KLQ ELA L Y RL TG +S G
Sbjct: 103 ALILDIFAQRAKTKEGKLQVELAQLHYLLPRL--------------TGMGVQLSRLAGGI 148
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
G RG GET+L++ RRRI +R S L +IEE+++ R + R AR+ L V
Sbjct: 149 GTRG----PGETKLEVDRRRIRKRISDLKKEIEEIKKHRTLHRKARQE------VPLPVV 198
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
+VGYTNAGKSTL++AL+++D+F++ +LFATLDP + V LP G LL+DTVGFI LP
Sbjct: 199 TLVGYTNAGKSTLLNALTNADVFAEDKLFATLDPTTRQVELPGGSMFLLTDTVGFIQKLP 258
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF ATLEEV+EADLL+HV+D + P E V +LQQ+G E I V+N
Sbjct: 259 HHLVAAFRATLEEVLEADLLLHVVDTSHPQAAEQMNAVQNILQQLGAQE---LPAIVVFN 315
Query: 421 KIDY 424
K+D
Sbjct: 316 KMDM 319
>gi|23501988|ref|NP_698115.1| GTP-binding protein [Brucella suis 1330]
gi|376280782|ref|YP_005154788.1| GTP-binding protein [Brucella suis VBI22]
gi|384224776|ref|YP_005615940.1| GTP-binding protein [Brucella suis 1330]
gi|23347938|gb|AAN30030.1| GTP-binding protein, putative [Brucella suis 1330]
gi|343382956|gb|AEM18448.1| GTP-binding protein, putative [Brucella suis 1330]
gi|358258381|gb|AEU06116.1| GTP-binding protein, putative [Brucella suis VBI22]
Length = 472
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 194/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKI DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIGNLDE 362
>gi|300023207|ref|YP_003755818.1| GTP-binding proten HflX [Hyphomicrobium denitrificans ATCC 51888]
gi|299525028|gb|ADJ23497.1| GTP-binding proten HflX [Hyphomicrobium denitrificans ATCC 51888]
Length = 467
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 139/346 (40%), Positives = 192/346 (55%), Gaps = 46/346 (13%)
Query: 80 KLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIK 139
+L+EA+ LAN++ D D D + P + R T G G V+
Sbjct: 61 RLSEAVGLANAI--------DLDIIDSAIVPM----------SEPRPSTLLGSGKVD--- 99
Query: 140 CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQ 199
+ G ++ + V+ L+ +QQRNLE+AW V+DR GLI+EIF A A T+E LQ
Sbjct: 100 -ELGGRVRDLDIGLVVVDHALTPVQQRNLEKAWNTKVVDRTGLILEIFGARARTREGVLQ 158
Query: 200 AELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRR 259
ELA L Y+K RLVR T E R GG GF+ G GE +++L +R
Sbjct: 159 VELAHLSYQKGRLVRA------WTHLE-----------RQRGGGGFLGGPGEAQIELDKR 201
Query: 260 RILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSD 319
+ +R + +++V RTR + R RR+ VAVVGYTNAGKSTL + ++
Sbjct: 202 MLQDRIDAIKRDLKDVVRTRDLHRKGRRKVP------YPIVAVVGYTNAGKSTLFNKITG 255
Query: 320 SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADL 379
+ + + ++FATLDP ++ V LPS R+++LSDTVGFISDLP LV AF ATLEEVVEADL
Sbjct: 256 AGVVAMDQVFATLDPTMREVKLPSARRIILSDTVGFISDLPTSLVAAFRATLEEVVEADL 315
Query: 380 LVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI-EVWNKIDY 424
++HV D E V +VL ++G+ + I EVWNKID
Sbjct: 316 ILHVRDIAHEETEAQARDVEKVLSELGIDTLPVDGHIQEVWNKIDL 361
>gi|148559818|ref|YP_001259032.1| GTP-binding proten HflX [Brucella ovis ATCC 25840]
gi|148371075|gb|ABQ61054.1| GTP-binding proten HflX [Brucella ovis ATCC 25840]
Length = 490
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 194/352 (55%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 76 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 117
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 118 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 173
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 174 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 216
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V R RA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 217 RRLLQEKILRIKRELETVVRPRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 268
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 269 RMTGAQVLAEDMLFATLDPPLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 328
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 329 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 380
>gi|407800371|ref|ZP_11147233.1| hypothetical protein OCGS_2306 [Oceaniovalibus guishaninsula
JLT2003]
gi|407057600|gb|EKE43574.1| hypothetical protein OCGS_2306 [Oceaniovalibus guishaninsula
JLT2003]
Length = 416
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 179/301 (59%), Gaps = 29/301 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
+A FG G + +K I ++ + ++ +S +QQRNLE+ W VLDR GL
Sbjct: 48 RAHPGHLFGTGKLAELKARIEA----DDVGLVLIDGPVSPVQQRNLEKEWSVKVLDRTGL 103
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF+ A T+E LQ E+AAL Y+++RLVR T E R GG
Sbjct: 104 ILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQRGG 146
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
GF+ G GET+++ RR I ++ L Q+++V RTR + RAAR + VA+
Sbjct: 147 LGFVGGPGETQIEADRRAIDDQIVRLRKQLDKVVRTRELHRAARAKVP------YPIVAL 200
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + L+ +D+ + LFATLDP ++ + LPSG +++LSDTVGFISDLP Q
Sbjct: 201 VGYTNAGKSTLFNRLTGADVMAKDMLFATLDPTMRRIDLPSGAEIILSDTVGFISDLPTQ 260
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEEV+ ADL+VHV D P E V +L ++GV + + IEVWNK
Sbjct: 261 LVAAFRATLEEVLAADLIVHVRDIAHPETEAQARDVEAILTELGVDDATPR--IEVWNKA 318
Query: 423 D 423
D
Sbjct: 319 D 319
>gi|150389993|ref|YP_001320042.1| HSR1-like GTP-binding protein [Alkaliphilus metalliredigens QYMF]
gi|149949855|gb|ABR48383.1| GTP-binding protein, HSR1-related [Alkaliphilus metalliredigens
QYMF]
Length = 429
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/321 (40%), Positives = 177/321 (55%), Gaps = 45/321 (14%)
Query: 112 VVVQN-PSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLER 170
+V+QN P++ + G G VE IK + E+ D + N +LSG Q RN+E
Sbjct: 52 IVIQNRPAVD-----VTYYIGKGKVEEIKVFCDSVEA----DMVIFNDVLSGSQIRNIEA 102
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
A V+DR LI++IF A KE KLQ ELA L Y+ RL G
Sbjct: 103 AMDIDVIDRTTLILDIFAQRAQAKEGKLQVELAQLKYRMPRL--------------KGLG 148
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
+ +S +G G G RG GE +L+ RR IL R + +++EV++ R VQRA R++
Sbjct: 149 KQMSKQGAGIGTRG----PGEKKLETDRRHILSRIHDIEQELKEVKQNREVQRAQRKKSE 204
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLP 342
+ VAVVGYTNAGKSTL++ L D ++F LFATLD L+ +V
Sbjct: 205 ------IPIVAVVGYTNAGKSTLMNRLLQMSETYQEDREVFVKDMLFATLDVSLRKLVFN 258
Query: 343 SGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVL 402
+L+DTVGF+S LP LV+AF ATLEEV ADLL+HV+D + N E R T L VL
Sbjct: 259 EKLTFILTDTVGFVSKLPHDLVNAFKATLEEVQYADLLLHVIDASNDNFEMQRKTTLGVL 318
Query: 403 QQVGVSEEKLKNMIEVWNKID 423
+GV +K+ I+V+NKID
Sbjct: 319 HDLGVQSKKI---IDVYNKID 336
>gi|114704562|ref|ZP_01437470.1| GTP binding protein-like [Fulvimarina pelagi HTCC2506]
gi|114539347|gb|EAU42467.1| GTP binding protein-like [Fulvimarina pelagi HTCC2506]
Length = 459
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 193/348 (55%), Gaps = 45/348 (12%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
AKL EAL LA +++ + D+ + P R T G G VE +
Sbjct: 49 AKLEEALGLAAAIQLE---IVDSGIITQRAP---------------RPATLIGQGKVEEL 90
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
K G E+ + ++ L+ +QQRNLER VLDR LI+EIF A TKE +L
Sbjct: 91 K----GVVVAEEIGLVIIDHPLTPVQQRNLERELNAKVLDRTALILEIFGERARTKEGRL 146
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y++ RLVR T E R GG GF+ G GET+++ R
Sbjct: 147 QVELAHLNYQRGRLVR------SWTHLE-----------RQRGGAGFLGGPGETQIEADR 189
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R++ + L ++E+VR TR + RA RR+ R VA+VGYTNAGKSTL + ++
Sbjct: 190 RQLQSKIKALEVELEKVRSTRQLHRAKRRK------RPHPIVALVGYTNAGKSTLFNRMT 243
Query: 319 DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 378
+D+F+ LFATLDP ++ L G ++L SDTVGFIS+LP LV AF ATLEEV+EAD
Sbjct: 244 GADVFAQNLLFATLDPTMRRTTLAHGTEILFSDTVGFISELPTHLVAAFRATLEEVIEAD 303
Query: 379 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
+++H+ D + P+ V Q+L+ + + + +++EVWNKID D
Sbjct: 304 IILHIRDVSDPDSLAQAEDVRQILRDLEIDADDTDHVVEVWNKIDRVD 351
>gi|427411898|ref|ZP_18902100.1| GTP-binding protein HflX [Sphingobium yanoikuyae ATCC 51230]
gi|425710188|gb|EKU73211.1| GTP-binding protein HflX [Sphingobium yanoikuyae ATCC 51230]
Length = 443
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 181/311 (58%), Gaps = 37/311 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I +N E+ + + V+ L+ +QQ NLE+ G V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLVNQEEA----ELVIVDNALTPVQQSNLEKGTGAKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V +TR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTKTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + L+ +++ ++ LFATLDP ++ +VLP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRLTGAEVMAEDLLFATLDPTMRQIVLPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN----------MIE 417
ATLEEV+ AD++VHV D P+ E R VL VL ++GV+ E +IE
Sbjct: 279 RATLEEVLSADIIVHVRDIAHPDTEAQRDDVLDVLSELGVAGEGALERGDGEADPPPIIE 338
Query: 418 VWNKIDYHDEE 428
WNK+D D E
Sbjct: 339 AWNKLDLLDAE 349
>gi|340028216|ref|ZP_08664279.1| small GTP-binding protein [Paracoccus sp. TRP]
Length = 435
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 225/449 (50%), Gaps = 70/449 (15%)
Query: 61 PPRLFLVQPRLKPPTFLQA---KLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R +++ P L +A L EA+ LA++L P V
Sbjct: 11 PTRAYVIHPDLGNARTRRAPELALEEAVALAHAL-----------------PAIEVTGAE 53
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
+ K F G E I H+ + + ++ ++ +QQRNLE+ WG +L
Sbjct: 54 VARLRKPDPGMLFSKGKREEIGAHLQAVADGEGAELVLIDGPVTPVQQRNLEKEWGVKIL 113
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 114 DRTGLILEIFADRARTREGVLQVELAALAYQRTRLVRA------WTHLE----------- 156
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I E+ L Q+ V +TR + R AR +
Sbjct: 157 RQRGGLGFVGGPGETQIEADRRAIDEQVVRLRRQLSRVVKTRELHRKARAKVP------Y 210
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
VA+VGYTNAGKSTL + L+ +++ + +LFATLDP ++ + LP R+V+LSDTVGFIS
Sbjct: 211 PIVALVGYTNAGKSTLFNRLTGAEVVARDQLFATLDPTMRQLTLPGERRVILSDTVGFIS 270
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
DLP +LV AF ATLEEV+ ADL++HV D + EE V ++L +GV ++ +IE
Sbjct: 271 DLPHELVAAFRATLEEVLAADLILHVRDISHSETEEQAADVGEILDSLGVEDD--VPLIE 328
Query: 418 VWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVS 477
VWNKID +S+ R ++T + DV+ I G+ +
Sbjct: 329 VWNKIDA---------------LSSDIRQALQNTDARKQDVQAISALTGEGIPALLSAIE 373
Query: 478 EDLGESMNKNHND------YSDG----WL 496
L E++++ + +SDG WL
Sbjct: 374 AKLAEALDEPRREAERLLSHSDGRRRAWL 402
>gi|398382998|ref|ZP_10541075.1| GTP-binding protein HflX [Sphingobium sp. AP49]
gi|397725708|gb|EJK86156.1| GTP-binding protein HflX [Sphingobium sp. AP49]
Length = 444
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 144/385 (37%), Positives = 206/385 (53%), Gaps = 58/385 (15%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I + ++ E + + V+ L+ +QQ NLE+ G V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLV----TQEEAELVIVDNALTPVQQSNLEKGTGAKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V +TR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTKTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + L+ +++ ++ LFATLDP ++ +VLP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRLTGAEVMAEDLLFATLDPTMRQIVLPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN----------MIE 417
ATLEEV+ AD++VHV D P+ + R VL VL ++GV+ E +IE
Sbjct: 279 RATLEEVLSADIIVHVRDIAHPDTDAQRDDVLDVLSELGVAGEGALERADTDSDPPPIIE 338
Query: 418 VWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVS 477
WNK+D D+E + A ++ S DV I GD D +S
Sbjct: 339 AWNKLDLLDQE---------------AVALAREAASRRDDVVIISALTGDGVDGLQRAIS 383
Query: 478 EDL--GESMNKNHNDYSDG----WL 496
E L G +++ +DG WL
Sbjct: 384 ERLTQGATVHNLRLPIADGAGLAWL 408
>gi|328543916|ref|YP_004304025.1| GTP binding protein-like protein [Polymorphum gilvum SL003B-26A1]
gi|326413660|gb|ADZ70723.1| GTP binding protein-like protein [Polymorphum gilvum SL003B-26A1]
Length = 458
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 136/316 (43%), Positives = 185/316 (58%), Gaps = 27/316 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V +K R T G G VE + + E + V+ L+ IQQRNLERA
Sbjct: 72 IVAALIVKISAPRPATLLGTGKVEDLAAQVEAEEVD----VVVVDHALTPIQQRNLERAL 127
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A TKE +LQ +LA L ++KSRLVR T E
Sbjct: 128 KTKVIDRTGLILEIFGARARTKEGRLQVDLAHLTWQKSRLVR------SWTHLE------ 175
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR+I ++ L ++++VRRTR + R R++
Sbjct: 176 -----RQRGGVGFMGGPGETQIEADRRQIQDKIMRLEKELDQVRRTRDLHRKKRKKIPQP 230
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + L+++ + + LFATLDP L+ + LP GR+V+LSDT
Sbjct: 231 ------VVALVGYTNAGKSTLFNRLTEAQVLAKDLLFATLDPTLRRIKLPHGREVILSDT 284
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP LV AF ATLEEV+EADL++HV D P+ + V + L+ +GV
Sbjct: 285 VGFISELPTHLVAAFRATLEEVLEADLILHVRDIAHPDTDAQAADVARTLEDLGVGPTTG 344
Query: 413 KNMIEVWNKIDYHDEE 428
++EVWNKID D E
Sbjct: 345 APIVEVWNKIDCLDAE 360
>gi|260565630|ref|ZP_05836114.1| GTP1/OBG [Brucella melitensis bv. 1 str. 16M]
gi|265991191|ref|ZP_06103748.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|260151698|gb|EEW86792.1| GTP1/OBG [Brucella melitensis bv. 1 str. 16M]
gi|263001975|gb|EEZ14550.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 472
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 140/352 (39%), Positives = 192/352 (54%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI-----------GLDIEHAEIAIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKS L +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQTRRKVPH--------PIVALVGYTNAGKSMLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|17987156|ref|NP_539790.1| GTP-binding protein HflX [Brucella melitensis bv. 1 str. 16M]
gi|17982822|gb|AAL52054.1| gtp-binding protein hflx [Brucella melitensis bv. 1 str. 16M]
Length = 505
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 140/352 (39%), Positives = 192/352 (54%), Gaps = 49/352 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G ++
Sbjct: 91 EARLEEAIGLARAIG-----------LDIEHAEIAIVTNP-------RPATLLGAGKAQS 132
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 133 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 188
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 189 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 231
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKS L +
Sbjct: 232 RRLLQEKILRIKRELETVVRTRALHRQTRRKVPH--------PIVALVGYTNAGKSMLFN 283
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
++ + + ++ LFATLDP L+ + LP G V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 284 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 343
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 344 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 395
>gi|384261623|ref|YP_005416809.1| Small GTP-binding protein domain [Rhodospirillum photometricum DSM
122]
gi|378402723|emb|CCG07839.1| Small GTP-binding protein domain [Rhodospirillum photometricum DSM
122]
Length = 438
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/301 (45%), Positives = 177/301 (58%), Gaps = 30/301 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G VE IK + + + + V+ L+ IQQRNLER W V+DR GLI+EIF
Sbjct: 65 TCLGGGAVERIKEEVE----RESIALVVVDTQLTPIQQRNLEREWACKVIDRTGLILEIF 120
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E KLQ ELA L Y++SRLVR T E R GG GF+
Sbjct: 121 GERARTAEGKLQVELAHLTYQRSRLVR------SWTHLE-----------RQRGGSGFLG 163
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++L RR I +R L ++EEVRRTR + R AR+R VA+VGYTN
Sbjct: 164 GPGETQIELDRRLIDDRIVRLKRELEEVRRTRGLHREARKRVP------YPVVALVGYTN 217
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + L+ + + LFATLDP ++++ LPSGRKV+LSDTVGF+SDLP +LV AF
Sbjct: 218 AGKSTLFNQLTAGGVLAKDMLFATLDPTMRALDLPSGRKVILSDTVGFVSDLPHELVAAF 277
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEEV AD++VHV D + E + V VL+ + + E + +E NK D D
Sbjct: 278 RATLEEVQAADVIVHVRDIAGLDTEAQKADVEDVLRGMDLEE---RQPLEALNKADCLDP 334
Query: 428 E 428
E
Sbjct: 335 E 335
>gi|418056278|ref|ZP_12694331.1| GTP-binding proten HflX [Hyphomicrobium denitrificans 1NES1]
gi|353209497|gb|EHB74900.1| GTP-binding proten HflX [Hyphomicrobium denitrificans 1NES1]
Length = 467
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 196/350 (56%), Gaps = 48/350 (13%)
Query: 80 KLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIK 139
+L+EA+ LAN++E D D + P + R T G G V+ +
Sbjct: 61 RLSEAVGLANAIE--------LDIIDSAIVP----------MSEPRPSTLLGSGKVDELG 102
Query: 140 CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQ 199
+ + + + V+ L+ +QQRNLE+AW V+DR GLI+EIF A A T+E LQ
Sbjct: 103 QRVRDLD----IGLVVVDHALTPVQQRNLEKAWNTKVVDRTGLILEIFGARARTREGVLQ 158
Query: 200 AELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRR 259
ELA L Y+K RLVR T E R GG GF+ G GE +++L RR
Sbjct: 159 VELAHLSYQKGRLVRA------WTHLE-----------RQRGGGGFLGGPGEAQIELDRR 201
Query: 260 RILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSD 319
+ +R + + +V RTR + R RR+ VAVVGYTNAGKSTL + ++
Sbjct: 202 MLQDRIDAIKRDLADVVRTRDLHRKGRRKVP------YPIVAVVGYTNAGKSTLFNKITG 255
Query: 320 SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADL 379
+ + + ++FATLDP ++ V LPS R+++LSDTVGFISDLP LV AF ATLEEVVEADL
Sbjct: 256 AGVVAMDQVFATLDPTMREVKLPSARRIILSDTVGFISDLPTMLVAAFRATLEEVVEADL 315
Query: 380 LVHVLDCTAPNLEEHRTTVLQVLQQVGV-SEEKLKNMIEVWNKIDY--HD 426
++HV D E V +VL ++G+ + + +++EVWNKID HD
Sbjct: 316 ILHVRDIAHEETEAQARDVEKVLGELGIDTIQADGHILEVWNKIDLVSHD 365
>gi|90419640|ref|ZP_01227550.1| GTP-binding protein HflX [Aurantimonas manganoxydans SI85-9A1]
gi|90336577|gb|EAS50318.1| GTP-binding protein HflX [Aurantimonas manganoxydans SI85-9A1]
Length = 406
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 183/315 (58%), Gaps = 27/315 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + + + R T G G VE +K I G E + + + L+ +QQRNLER
Sbjct: 11 IVASGVVSGQRPRPATLIGTGKVEEMKGVIAGEE----IGLVVFDHPLTPVQQRNLEREL 66
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDR GLI+EIF A TKE +LQ ELA L Y++ RLVR T E
Sbjct: 67 NVKVLDRTGLILEIFGERARTKEGRLQVELAHLNYQRGRLVR------SWTHLE------ 114
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR++ E+ L +E+VRRTR + RA R++
Sbjct: 115 -----RQRGGAGFLGGPGETQIESDRRQLQEKIKRLEKDLEQVRRTRQLHRAQRKKAPHP 169
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL + L+ +++ + LFATLDP L+ LP G ++L SDT
Sbjct: 170 ------VVALVGYTNAGKSTLFNRLTGAEVMAKDLLFATLDPTLRRTTLPHGTEILFSDT 223
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+SDLP LV AF ATLEEV+EAD+++HV D P+ V ++L+ + + +
Sbjct: 224 VGFVSDLPTHLVAAFRATLEEVIEADIVLHVRDVADPDTLAQAEDVRKILRDLDIDVDDS 283
Query: 413 KNMIEVWNKIDYHDE 427
+++E+WNK+D DE
Sbjct: 284 DHVVEIWNKVDLLDE 298
>gi|338707838|ref|YP_004662039.1| GTP-binding proten HflX [Zymomonas mobilis subsp. pomaceae ATCC
29192]
gi|336294642|gb|AEI37749.1| GTP-binding proten HflX [Zymomonas mobilis subsp. pomaceae ATCC
29192]
Length = 458
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 201/383 (52%), Gaps = 47/383 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + +A T FG G V+ I A E+D + V+ L+ IQQRNLE A
Sbjct: 51 VVAKLAFRLRSPKAATLFGQGQVDQIVT----AAKDEEIDLVVVDGPLTPIQQRNLETAL 106
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A T E +LQ ELA L Y+ RLVR T E
Sbjct: 107 DVKVIDRTGLILEIFGARAATAEGRLQVELAHLDYQAGRLVR------SWTHLE------ 154
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L + +V RTR + RA R+R
Sbjct: 155 -----RQRGGFGFLGGPGETQIEADRRMIRDRMAKLRRDLAQVTRTRGLHRARRKRAP-- 207
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+A+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ + LP K +LSDT
Sbjct: 208 ----WPVIALVGYTNAGKSTLFNRLTGADVMAKDLLFATLDPTMRQIELPGIDKAILSDT 263
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE--- 409
VGF+SDLP QLV AF ATLEEV ADL++HV D P+ + R V +VL ++G++
Sbjct: 264 VGFVSDLPTQLVAAFRATLEEVTAADLILHVRDIAQPDSDSERDDVERVLAEIGIAPVEE 323
Query: 410 --EKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 467
E +IE WNK D EE + + SR E DV I + G+
Sbjct: 324 GGEFAIPIIEAWNKSDLLSEEAHESLAAEA------SRRE---------DVALISAWTGE 368
Query: 468 DADNNDGFVSEDLGESMNKNHND 490
++ +SE L + H D
Sbjct: 369 GIESLRHLISERLSNAHRLRHID 391
>gi|421849533|ref|ZP_16282512.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus NBRC 101655]
gi|421852885|ref|ZP_16285568.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371459720|dbj|GAB27715.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus NBRC 101655]
gi|371478884|dbj|GAB30771.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 439
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 193/316 (61%), Gaps = 31/316 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ L R+ T G G V++++ A ++D + V+A LS QQRNLE
Sbjct: 51 VIVRKDVLLLRSRRSATLLGKGQVDSLRI----AVKADQVDVVVVDAKLSPAQQRNLETE 106
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR GLI++IF A A TKE LQ ELA L Y++SRLVR+ T E
Sbjct: 107 CGCKVIDRTGLILDIFGARAATKEGTLQVELAHLEYQRSRLVRL------WTHLE----- 155
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L +E+VRRTR + R AR+R
Sbjct: 156 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKKDLEQVRRTRGLHRQARKRVP- 208
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++++ LPSGR+V+LSD
Sbjct: 209 -----FPVVALVGYTNAGKSTLFNALTGATVYAQDQLFATLDPTMRAIDLPSGRRVILSD 263
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 407
TVGFISDLP +L+ AF ATLEEV EAD+++HV D P+ + VL VL+ + +
Sbjct: 264 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVAHPDSASQKKDVLGVLEGMAKDDML 323
Query: 408 SEEKLKNMIEVWNKID 423
++ + +IEV NK+D
Sbjct: 324 EQDWPERIIEVLNKVD 339
>gi|381203275|ref|ZP_09910382.1| GTP-binding protein HflX [Sphingobium yanoikuyae XLDN2-5]
Length = 443
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 180/311 (57%), Gaps = 37/311 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I +N E+ + + V+ L+ +QQ NLE G V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLVNQEEA----ELVIVDNALTPVQQSNLEEGTGAKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V +TR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTKTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + L+ +++ ++ LFATLDP ++ +VLP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRLTGAEVMAEDLLFATLDPTMRQIVLPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN----------MIE 417
ATLEEV+ AD++VHV D P+ E R VL VL ++GV+ E +IE
Sbjct: 279 RATLEEVLSADIIVHVRDIAHPDTEAQRDDVLDVLSELGVAGEGALERGDGEADPPPIIE 338
Query: 418 VWNKIDYHDEE 428
WNK+D D E
Sbjct: 339 AWNKLDLLDTE 349
>gi|329114580|ref|ZP_08243339.1| GTP-binding protein HflX [Acetobacter pomorum DM001]
gi|326696060|gb|EGE47742.1| GTP-binding protein HflX [Acetobacter pomorum DM001]
Length = 439
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 193/316 (61%), Gaps = 31/316 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ L R+ T G G V++++ A ++D + V+A LS QQRNLE
Sbjct: 51 VIVRKDVLLLRSRRSATLLGKGQVDSLRI----AVKADQVDVVVVDAKLSPAQQRNLETE 106
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR GLI++IF A A TKE LQ ELA L Y++SRLVR+ T E
Sbjct: 107 CGCKVIDRTGLILDIFGARAATKEGTLQVELAHLEYQRSRLVRL------WTHLE----- 155
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L +E+VRRTR + R AR+R
Sbjct: 156 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKKDLEQVRRTRGLHRQARKRVP- 208
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++++ LPSGR+V+LSD
Sbjct: 209 -----FPVVALVGYTNAGKSTLFNALTGATVYAQDQLFATLDPTMRAIDLPSGRRVILSD 263
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 407
TVGFISDLP +L+ AF ATLEEV EAD+++HV D P+ + VL VL+ + +
Sbjct: 264 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVAHPDSAAQKKDVLGVLEGMAKDDML 323
Query: 408 SEEKLKNMIEVWNKID 423
++ + +IEV NK+D
Sbjct: 324 EQDWPERIIEVLNKVD 339
>gi|452750887|ref|ZP_21950634.1| GTP-binding protein HflX [alpha proteobacterium JLT2015]
gi|451962081|gb|EMD84490.1| GTP-binding protein HflX [alpha proteobacterium JLT2015]
Length = 414
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/346 (40%), Positives = 197/346 (56%), Gaps = 45/346 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ L+ ++ D DK++ V V+ P R T FG G VE
Sbjct: 15 EARLEEAVALSAAIS--------LDVADKDI---VRVRAP-------RPATLFGSGQVEM 56
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ +++ + I V+ LS +QQRNLE+ G+ V+DR GLI+EIF A T E +
Sbjct: 57 LTARAEASDA----ELIVVDGALSPLQQRNLEKETGRKVIDRTGLILEIFGERAATHEGR 112
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+ SRLVR T E R GG GF+ G GET+++
Sbjct: 113 LQVELAHLEYQASRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIETD 155
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I +R + + ++E+V RTR + R R++ VA+VGYTNAGKSTL + L
Sbjct: 156 RRLIRDRMAKIRRELEQVTRTRTLHRERRQKAP------YPIVALVGYTNAGKSTLFNRL 209
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 377
+ + + + LFATLDP ++S+ +P KV++SDTVGF+SDLP QLV AF ATLEEV+EA
Sbjct: 210 TGATVMAKDLLFATLDPTMRSISIPGFDKVIMSDTVGFVSDLPTQLVAAFRATLEEVLEA 269
Query: 378 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
DL+VHV D P+ + V++ L +GV +++V NKID
Sbjct: 270 DLIVHVRDVAHPDTDAQAADVMRTLADLGVEPGGDVPILDVLNKID 315
>gi|383786050|ref|YP_005470619.1| GTP-binding protein HflX [Fervidobacterium pennivorans DSM 9078]
gi|383108897|gb|AFG34500.1| GTP-binding protein HflX [Fervidobacterium pennivorans DSM 9078]
Length = 423
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 200/370 (54%), Gaps = 55/370 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E IK N E + +D + + ++ IQQRN+E P+LDR +I+EIF
Sbjct: 54 TYVGSGKLEKIK---NFCE-ENRIDVVIFDDEITPIQQRNIENILKVPILDRTQVILEIF 109
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ HA T E KLQ E+A L+Y+ RL G+ +S G G G RG
Sbjct: 110 SRHATTHEGKLQVEMAKLVYELPRL--------------RGKGLYLSNPGAGIGTRG--- 152
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET L+L +R++ +R S L ++ +++ R R +R G V++VGYTN
Sbjct: 153 -PGETALELDKRKVKQRISTLRKELAKLKLNRENARKSRLESG------YYLVSIVGYTN 205
Query: 308 AGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
AGKSTL+S++S + D+ +LF+TL+P ++ V LPSGR L+ DTVGFIS LP LV+A
Sbjct: 206 AGKSTLLSSISGEKDIIVSDKLFSTLNPTIRKVKLPSGRSCLVGDTVGFISKLPHTLVEA 265
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID--- 423
FH+TLEE++ +DLL+ V+D + P ++ + VL+++G E K I V+NKID
Sbjct: 266 FHSTLEEILYSDLLLLVVDISDPFYKDKISASYSVLEEIGAHE---KPTILVFNKIDVLP 322
Query: 424 YHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDD--ADNNDGFVSEDLG 481
Y E+ EY G IS R G DD + D F S D+
Sbjct: 323 YDKLEIIKYEYPHGVFISAKQRK------------------GLDDLFSKMEDYFKSFDVR 364
Query: 482 ESMNKNHNDY 491
++ NH+DY
Sbjct: 365 MNLRINHSDY 374
>gi|20257541|gb|AAM15935.1| HflX-like protein [Gluconacetobacter diazotrophicus]
Length = 306
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/272 (46%), Positives = 170/272 (62%), Gaps = 27/272 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ L R T G G VE+++ + + + + V++ LS +QQRNLERA
Sbjct: 51 VIVRQAVLVLRARRPSTLLGNGQVESLRAAVQ----QDRVAVVIVDSRLSPVQQRNLERA 106
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR LI++IF A TKE LQ ELA L Y++SRLVR T E
Sbjct: 107 LGCKVIDRTALILDIFGERAATKEGTLQVELAHLEYQRSRLVRT------WTHLE----- 155
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + RAARRR
Sbjct: 156 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRAARRRVP- 208
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL +AL+ + +F+ +LFATLDP ++ + LPSGR+++LSD
Sbjct: 209 -----FPVVALVGYTNAGKSTLFNALTGATVFAQDQLFATLDPTMRGIRLPSGRRIILSD 263
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHV 383
TVGFISDLP +L+ AF ATLEEV EAD+++HV
Sbjct: 264 TVGFISDLPTELIAAFRATLEEVAEADVILHV 295
>gi|347758039|ref|YP_004865601.1| GTP-binding proten HflX [Micavibrio aeruginosavorus ARL-13]
gi|347590557|gb|AEP09599.1| GTP-binding proten HflX [Micavibrio aeruginosavorus ARL-13]
Length = 440
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 178/306 (58%), Gaps = 27/306 (8%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K A FG GT E I + + D +FVN LS +QQRNLE+ W V+DR GL
Sbjct: 62 KIDAGALFGKGTREMIAAQVEVMKP----DVVFVNHALSPVQQRNLEQEWKVKVIDRTGL 117
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A A T+E K+Q +LAAL Y+KSRLV+ S R GG
Sbjct: 118 ILEIFGARAQTREGKIQVQLAALEYQKSRLVKS-----------------WSHLERQRGG 160
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G G GET+L++ RR + +R + L +E++ RTR +QR R + V++
Sbjct: 161 MGKTGGPGETQLEIDRRLVTDRITQLKRDLEQISRTRDLQRKGREK------VPFPVVSL 214
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + L+ +++F++ FATLDP ++ V L G +++L+DTVGFI+DLP
Sbjct: 215 VGYTNAGKSTLFNRLTGANVFAEDLPFATLDPTMRRVKLEDGNEIILADTVGFIADLPTH 274
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV +F ATLE+V AD+++HV D + + + V+ +L +G+ + ++EV NK+
Sbjct: 275 LVASFRATLEQVQYADVIIHVRDMSRHDRAAQKNDVVSILHDLGIEYASDRRVVEVLNKM 334
Query: 423 DYHDEE 428
D EE
Sbjct: 335 DAIAEE 340
>gi|189218239|ref|YP_001938881.1| GTP-binding protein protease modulator [Methylacidiphilum
infernorum V4]
gi|189185097|gb|ACD82282.1| GTP-binding protein protease modulator [Methylacidiphilum
infernorum V4]
Length = 432
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 175/314 (55%), Gaps = 35/314 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLE 169
V+V+ K A + G G + I C + ++ + N LS IQ RNL
Sbjct: 42 VIVERLVQKMSSPTAPYYIGKGKAKEIAEICR------QKKVSFVLFNEELSPIQCRNLS 95
Query: 170 RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGE 229
+G VLDR LI++IF A T+E KLQ ELA L+Y RL R+
Sbjct: 96 SLFGCKVLDRTQLILDIFAQRAKTREGKLQIELAQLLYLLPRLTRLW------------- 142
Query: 230 AEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
+ R +GG G G GET+L++ RRRILE+ L ++EEV++TR +QR++R++
Sbjct: 143 ----THLSRQTGGIG-TRGPGETQLEVDRRRILEKIHRLKKELEEVKKTRFIQRSSRQKF 197
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLL 349
T +VGYTNAGKSTL + L+++ + + +LFATLDP ++ G K+ L
Sbjct: 198 P------WPTACLVGYTNAGKSTLFNRLTNAHVLVEDKLFATLDPTIRLFEFSGGYKIFL 251
Query: 350 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 409
SDTVGFI LP L+++F ATLEEV EADLL+H++D + P E V +VL+Q+G
Sbjct: 252 SDTVGFIQKLPHHLIESFKATLEEVTEADLLIHLVDVSHPWAETQINEVNKVLEQIGAIH 311
Query: 410 EKLKNMIEVWNKID 423
K I VWNKID
Sbjct: 312 ---KPTILVWNKID 322
>gi|326791286|ref|YP_004309107.1| GTP-binding proten HflX [Clostridium lentocellum DSM 5427]
gi|326542050|gb|ADZ83909.1| GTP-binding proten HflX [Clostridium lentocellum DSM 5427]
Length = 418
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/302 (39%), Positives = 176/302 (58%), Gaps = 35/302 (11%)
Query: 129 FFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
+ G G VE IK ++GA I + LS IQ RNL A V+DR +I++I
Sbjct: 60 YIGSGKVEEIKEMAQLHGA------TGIVFDDELSPIQMRNLAEALQIKVMDRTMVILDI 113
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F + A +KE KLQ E+A L Y+ SRL+ G ++S + G G RG
Sbjct: 114 FASRALSKEGKLQVEMAQLKYQSSRLI--------------GFGTMLSRQAGGIGSRG-- 157
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GE +L+L +R + R L +++ EV + R + R+ R D VA+VGYT
Sbjct: 158 --PGEKKLELDKRHLKVRMEILQAELAEVEKHRQLIRSRR------DKNNTPVVAIVGYT 209
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
NAGKSTL++ LS SD++ +LFATLDP + + LPSG ++LL+DTVGFI LP LV A
Sbjct: 210 NAGKSTLLNQLSGSDVYVQNQLFATLDPTTRGITLPSGSEILLTDTVGFIRKLPHHLVKA 269
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
F++TLEE AD+++HV+D ++P+LE H+ V + L ++ +S+ + + V+NKID H
Sbjct: 270 FYSTLEEAKYADIILHVMDVSSPHLETHQQVVYETLSRLQISDIPI---VAVYNKIDTHV 326
Query: 427 EE 428
E+
Sbjct: 327 ED 328
>gi|374854026|dbj|BAL56919.1| small GTP-binding protein [uncultured prokaryote]
Length = 441
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 171/303 (56%), Gaps = 34/303 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPV--LDRVGLIIE 185
T+ GPG VE IK + + + + + LS QQRNLE A+G V LDR LI++
Sbjct: 56 TYIGPGKVEEIKALVRAMHA----NMVIFDDELSPSQQRNLENAFGDEVRVLDRTALILD 111
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF HAHT+E LQ ELA Y+ RL R + ++ + GS GRG
Sbjct: 112 IFAQHAHTREGALQVELAQYEYRLPRLTR--------------RWQNLAQQAGGSFGRGG 157
Query: 246 ISGAG-----ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
ISG G E +L++ RRRI +R +HL ++EEVR R R + V
Sbjct: 158 ISGVGLRGPGEKQLEIDRRRIKDRIAHLKRELEEVRAHRQRYRER------RRRAQVPVV 211
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
A+VGYTNAGKSTL++A+S + + +LFATLDP + V LP G L +DTVGFI LP
Sbjct: 212 ALVGYTNAGKSTLLNAVSGASVLVADQLFATLDPTTRRVKLPEGGVALFTDTVGFIQKLP 271
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF ATLEE+ EADL++HVLD T PN + V+Q L+++GV + MI N
Sbjct: 272 HPLVAAFRATLEEINEADLIIHVLDITHPNALQQARVVIQTLREIGVHD---IPMITALN 328
Query: 421 KID 423
KID
Sbjct: 329 KID 331
>gi|346992860|ref|ZP_08860932.1| GTP-binding protein HflX [Ruegeria sp. TW15]
Length = 423
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/318 (41%), Positives = 191/318 (60%), Gaps = 33/318 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETI--KCHINGAESKGELDAIFVNAILSGIQQRNLER 170
VV + ++ +A+A FG G +E + + H N E++ + ++ ++ +QQRNLE+
Sbjct: 45 VVGSEVVRLQRAQAGLLFGSGKIEELGERFHEN------EVELVLIDGPVTPVQQRNLEK 98
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 99 AWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE---- 148
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAAR +
Sbjct: 149 -------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLQKVVKTRTLHRAARAKVP 201
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
VA+VGYTNAGKSTL + L+ + + + LFATLDP ++ V LP G +V+LS
Sbjct: 202 ------YPIVALVGYTNAGKSTLFNGLTGAKVMARDMLFATLDPTMRRVELPDGPEVILS 255
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGFIS+LP +LV AF ATLEEV+ ADL+VH+ D + E V +L +GV ++
Sbjct: 256 DTVGFISNLPTELVAAFRATLEEVLGADLVVHLRDISHEETEAQAQDVETILTSLGVEDD 315
Query: 411 KLKNMIEVWNKIDYHDEE 428
+ + +EVWNKID E
Sbjct: 316 RPR--LEVWNKIDLLSSE 331
>gi|354582787|ref|ZP_09001688.1| GTP-binding proten HflX [Paenibacillus lactis 154]
gi|353199079|gb|EHB64545.1| GTP-binding proten HflX [Paenibacillus lactis 154]
Length = 428
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 186/325 (57%), Gaps = 32/325 (9%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE ++ ++G G AIF + LSG Q RNLE A ++DR LI++IF
Sbjct: 67 FIGKGKVEELRMAVDGL---GATTAIF-DQELSGAQVRNLEEALDVKIIDRTQLILDIFA 122
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E +Q ELA L Y RL +G + +S G G G RG
Sbjct: 123 QRAKTREGIIQVELAQLTYLLPRL--------------SGHGKNLSRLGAGIGTRG---- 164
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I +R S L Q++EV R R + R R++ G VA+VGYTNA
Sbjct: 165 PGETKLETDRRHIRDRISDLKRQLDEVTRHRNLHRERRKKSGA------VQVALVGYTNA 218
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++ L+++D++ + +LFATLDP + + LPSG++V+L+DTVGFI +LP LV AF
Sbjct: 219 GKSTLLNRLTNADVYIENQLFATLDPTSRVLELPSGKEVVLTDTVGFIQNLPHDLVAAFR 278
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
ATLEE EADL++HV+D ++ EE V +L+ +G ++ K I ++NK D E
Sbjct: 279 ATLEEANEADLILHVVDASSTMREEQMAVVQSILEDLGAAD---KPQIVLFNKKDACQPE 335
Query: 429 MGDVEYIDGDDISNFSRAEDKDTTS 453
++ GD S +D+D TS
Sbjct: 336 QLEM-LPSGDGYLKISAYDDEDLTS 359
>gi|223939697|ref|ZP_03631570.1| GTP-binding proten HflX [bacterium Ellin514]
gi|223891654|gb|EEF58142.1| GTP-binding proten HflX [bacterium Ellin514]
Length = 414
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 172/298 (57%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A TF G G + H E+D + + L+ Q RNLE+ + +LDR LI++
Sbjct: 47 AATFIGSGKAQEFARHC----VSNEVDTVIFDDELTPAQSRNLEQVFNCKILDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A TKE KLQ ELA L + RL R G R GG G
Sbjct: 103 IFAQRARTKEGKLQIELAQLQHLLPRLTRFWG-----------------HLSRQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RRR+ +R + + ++E VRR R+ QR R+R+ ++VGY
Sbjct: 145 MRGDGETQLETDRRRVQDRIARIARELEVVRRQRSTQRHGRQRNL------WPLASIVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL++A++ +D+ ++ +LFATLDP + + LP+ + VLL+DTVGFI LP LV+
Sbjct: 199 TNAGKSTLLNAVTGADVLAENKLFATLDPTTRRLRLPTNQNVLLTDTVGFIRKLPHNLVE 258
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATLEEVV+ADLL+HV+D ++P EE V VL ++G + K + V+NKID
Sbjct: 259 AFKATLEEVVQADLLIHVVDGSSPQAEEQIAAVNAVLDEIGAAG---KPTMMVFNKID 313
>gi|302840241|ref|XP_002951676.1| hypothetical protein VOLCADRAFT_105192 [Volvox carteri f.
nagariensis]
gi|300262924|gb|EFJ47127.1| hypothetical protein VOLCADRAFT_105192 [Volvox carteri f.
nagariensis]
Length = 1885
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 166/295 (56%), Gaps = 62/295 (21%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+F+N +L+ +Q+RN+E A G+PV+DRV ELA+L Y RLV
Sbjct: 749 VFINEVLTALQERNIELALGRPVVDRV--------------------ELASLSYMLPRLV 788
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGET--------------------E 253
R+RG DGR A G G+G G +S G E
Sbjct: 789 RMRGADGRR-----------GAFGVGAGWGGIMSDMGPAPQVSRPPPGGLGGGGGSGDPE 837
Query: 254 LQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTL 313
L+ QR RI +R S L ++++ V +R VQR RR GL TVA+VGYTN GK++L
Sbjct: 838 LRQQRFRIKQRLSTLRAELKAVAASRGVQRQGRR------AAGLPTVAIVGYTNVGKTSL 891
Query: 314 VSALSDSDLFSDA---RLFATLDPRLKSVVLPS-GRKVLLSDTVGFISDLPLQLVDAFHA 369
A+ D LFATLDP ++ V LP+ G V +SDTVGFI DLP+ LV AF A
Sbjct: 892 AGAMCSRDAGLPPPTDMLFATLDPAVRRVWLPTRGSHVAVSDTVGFIRDLPVGLVAAFRA 951
Query: 370 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK-NMIEVWNKID 423
TLEEVV AD+L+HVLD ++PN+ + R TVL VL+Q+GVSE+ L IEVWNK+D
Sbjct: 952 TLEEVVAADMLLHVLDASSPNVAQQRDTVLAVLRQLGVSEKVLTCRTIEVWNKVD 1006
>gi|258542822|ref|YP_003188255.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-01]
gi|384042743|ref|YP_005481487.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-12]
gi|384051260|ref|YP_005478323.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-03]
gi|384054368|ref|YP_005487462.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-07]
gi|384057602|ref|YP_005490269.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-22]
gi|384060243|ref|YP_005499371.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-26]
gi|384063535|ref|YP_005484177.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-32]
gi|384119545|ref|YP_005502169.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256633900|dbj|BAH99875.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-01]
gi|256636959|dbj|BAI02928.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-03]
gi|256640012|dbj|BAI05974.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-07]
gi|256643068|dbj|BAI09023.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-22]
gi|256646123|dbj|BAI12071.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-26]
gi|256649176|dbj|BAI15117.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-32]
gi|256652163|dbj|BAI18097.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655220|dbj|BAI21147.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-12]
Length = 448
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/316 (43%), Positives = 193/316 (61%), Gaps = 31/316 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ L R+ T G G V++++ A ++D + V+A LS QQRNLE
Sbjct: 60 VIVRKDVLLLRSRRSATLLGKGQVDSLRI----AVKADQVDVVVVDAKLSPAQQRNLETE 115
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR GLI++IF A A TKE +Q ELA L Y++SRLVR+ T E
Sbjct: 116 CGCKVIDRTGLILDIFGARAATKEGTVQVELAHLEYQRSRLVRL------WTHLE----- 164
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L +E+VRRTR + R AR+R
Sbjct: 165 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKKDLEQVRRTRGLHRQARKRVP- 217
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++++ LPSGR+V+LSD
Sbjct: 218 -----FPVVALVGYTNAGKSTLFNALTGATVYAQDQLFATLDPTMRAIDLPSGRRVILSD 272
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 407
TVGFISDLP +L+ AF ATLEEV EAD+++HV D P+ + VL VL+ + +
Sbjct: 273 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVAHPDSASQKKDVLGVLEGMAKDDML 332
Query: 408 SEEKLKNMIEVWNKID 423
++ + +IEV NK+D
Sbjct: 333 EQDWPERIIEVLNKVD 348
>gi|393724841|ref|ZP_10344768.1| HSR1-like GTP-binding protein [Sphingomonas sp. PAMC 26605]
Length = 428
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 149/384 (38%), Positives = 204/384 (53%), Gaps = 53/384 (13%)
Query: 50 VVTLFNRDPDDPPR---LFLVQPRLKPPTF-LQAKLNEALCLANSLEEQRDGYFDTDFFD 105
+ T F RD DD R +V P T +A+L E LA ++
Sbjct: 1 MTTGFERDRDDVARGAKAVVVYPDTGVSTRDAEARLAETAGLAMAI-------------- 46
Query: 106 KELPPHV-VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQ 164
HV VV ++K + T G G +E + + GE + + +A L+ +Q
Sbjct: 47 -----HVEVVDRVAIKVRTLQPSTLIGKGQLEALAATVR----MGEAELVVFDASLTPVQ 97
Query: 165 QRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTF 224
QRNLE+A V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T
Sbjct: 98 QRNLEKALSAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTH 151
Query: 225 GETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRA 284
E R GG GF+ G GET+++ RR I +R + L ++E+V RTR + R
Sbjct: 152 LE-----------RQRGGFGFLGGPGETQIEADRRLIRDRMARLKKELEQVSRTRGLHRD 200
Query: 285 ARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG 344
R+R +A+VGYTNAGKSTL + ++ +D+ ++ LFATLDP L+ + LP
Sbjct: 201 RRQRAPWP------VIALVGYTNAGKSTLFNRMTGADVMAEDLLFATLDPTLRQIALPGI 254
Query: 345 RKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 404
K +LSDTVGF+S+LP QLV AF ATLEEVV ADLL+HV D P+ R V VL+
Sbjct: 255 DKAILSDTVGFVSELPTQLVAAFKATLEEVVSADLLIHVRDIAHPDTLVQRDDVETVLRD 314
Query: 405 VGVSEEKLKNMIEVWNKIDYHDEE 428
+GV + IE WNK+D D++
Sbjct: 315 IGVDTSVPR--IEAWNKLDLLDDD 336
>gi|85708673|ref|ZP_01039739.1| GTPase [Erythrobacter sp. NAP1]
gi|85690207|gb|EAQ30210.1| GTPase [Erythrobacter sp. NAP1]
Length = 432
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 178/307 (57%), Gaps = 33/307 (10%)
Query: 127 DTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
+T FG G VE IK + E + + V+ L+ IQQRNLE + V+DR GLI+EI
Sbjct: 58 NTLFGSGQVENIKILCE----QHECELVIVDGALTPIQQRNLEDKLKRKVIDRTGLILEI 113
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A T E +LQ ELA L Y++SRLVR T E R GG GF+
Sbjct: 114 FGERAATAEGRLQVELAHLDYQQSRLVR------SWTHLE-----------RQRGGFGFL 156
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRG-LATVAVVGY 305
G GET+++ RR I +R L ++E+VR+TR + R R GR +A+VGY
Sbjct: 157 GGPGETQIEADRRMIRQRMGRLRRELEQVRKTRTLHRERR-------GRAPWPVIALVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ +++ ++ LFATLDP ++++ LP K +LSDTVGFISDLP QLV
Sbjct: 210 TNAGKSTLFNRLTGAEVMAEDLLFATLDPTMRAISLPGVEKAILSDTVGFISDLPTQLVA 269
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV----SEEKLKNMIEVWNK 421
AF ATLEEV AD++ HV D P + V++VL +GV S E ++EVWNK
Sbjct: 270 AFRATLEEVTGADIICHVRDMANPAHSAQKKQVMEVLSDLGVVDAESGESEIPILEVWNK 329
Query: 422 IDYHDEE 428
D E+
Sbjct: 330 ADLLSED 336
>gi|261406202|ref|YP_003242443.1| GTP-binding proten HflX [Paenibacillus sp. Y412MC10]
gi|261282665|gb|ACX64636.1| GTP-binding proten HflX [Paenibacillus sp. Y412MC10]
Length = 430
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 180/312 (57%), Gaps = 35/312 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+ QN + K F G G VE ++ I+G G AIF + LSG Q RNLE +
Sbjct: 54 VITQNREVPDSKW----FIGKGKVEELRMAIDGL---GATTAIF-DQELSGAQVRNLEES 105
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI++IF A T+E +Q ELA L Y RL +G +
Sbjct: 106 LDVKIIDRTQLILDIFAQRAKTREGIIQVELAQLTYLLPRL--------------SGHGK 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+S G G G RG GE++L+ RR I +R S L Q++EV R R + R R++ G
Sbjct: 152 NLSRLGAGIGTRG----PGESKLETDRRHIRDRISDLKRQLDEVTRHRTLHRERRKKSGA 207
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL++ L+ +D++ + +LFATLDP + + LPSG++V+L+D
Sbjct: 208 ------VQVALVGYTNAGKSTLLNRLTAADVYIENQLFATLDPTSRVLELPSGKEVVLTD 261
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV AF ATLEE EADL++HV+D ++P +E V +LQ +G S+
Sbjct: 262 TVGFIQNLPHDLVAAFRATLEEANEADLILHVVDASSPMRDEQMAVVQSILQDLGASD-- 319
Query: 412 LKNMIEVWNKID 423
K I ++NK D
Sbjct: 320 -KPQIVLFNKKD 330
>gi|384914720|ref|ZP_10015472.1| putative GTPase [Methylacidiphilum fumariolicum SolV]
gi|384527337|emb|CCG91340.1| putative GTPase [Methylacidiphilum fumariolicum SolV]
Length = 441
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 118/270 (43%), Positives = 160/270 (59%), Gaps = 27/270 (10%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+ N LS IQ RNL +G VLDR LI++IF A T+E KLQ ELA L+Y RL
Sbjct: 80 VLFNDDLSPIQCRNLSSLFGCKVLDRTQLILDIFAQRAKTREGKLQIELAQLLYLLPRLT 139
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
R+ + R +GG G G GET+L++ RRRI E+ L ++E
Sbjct: 140 RLW-----------------THLSRQTGGIG-TRGPGETQLEVDRRRIQEKIHRLKKELE 181
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLD 333
EV++TR +QR+ R++ T +VGYTNAGKSTL + L++S + + +LFATLD
Sbjct: 182 EVKKTRFIQRSCRQKSS------WPTACLVGYTNAGKSTLFNLLTNSKVLVENKLFATLD 235
Query: 334 PRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEE 393
P ++ G+K+ LSDTVGFI LP LV++F ATLEEV EADLL+H++D + P E
Sbjct: 236 PTIRLFEASGGQKIFLSDTVGFIQKLPFHLVESFKATLEEVKEADLLIHLVDISHPLSEN 295
Query: 394 HRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
V +VL+Q+G + K I VWNKID
Sbjct: 296 QIEEVNKVLEQLGALD---KPTILVWNKID 322
>gi|390169597|ref|ZP_10221531.1| GTP-binding protein HflX [Sphingobium indicum B90A]
gi|389587871|gb|EIM65932.1| GTP-binding protein HflX [Sphingobium indicum B90A]
Length = 443
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 205/384 (53%), Gaps = 57/384 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I E+ + + V+ LS +QQ NLE+A V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLARMEEA----ELVIVDNALSPVQQSNLEKATETKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V +TR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTKTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + ++ +D+ ++ LFATLDP ++ + LP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRMTGADVMAEDLLFATLDPTMRQIALPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL---------KNMIEV 418
ATLEEV+ ADL+VHV D P+ + R V+ VL ++G++ E +IE
Sbjct: 279 RATLEEVLSADLIVHVRDIAHPDSDAQRDDVMDVLGELGIAGEGAFEAGEGEEPPPIIEA 338
Query: 419 WNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE 478
WNK+D DE D + +R +T + DV + G+ D+ VS
Sbjct: 339 WNKLDLLDE-----------DAATLAR----ETAARRSDVVVLSALTGEGVDDLQRAVSA 383
Query: 479 DL--GESMNKNHNDYSDG----WL 496
L G +++ H +DG WL
Sbjct: 384 RLTAGAQVHRLHVPLADGAAMAWL 407
>gi|309792496|ref|ZP_07686960.1| GTP-binding proten HflX [Oscillochloris trichoides DG-6]
gi|308225484|gb|EFO79248.1| GTP-binding proten HflX [Oscillochloris trichoides DG6]
Length = 458
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 172/297 (57%), Gaps = 26/297 (8%)
Query: 129 FFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
F GPG V + AE + + A + + LS Q RNLE A VLDR LI++I
Sbjct: 84 FIGPGKVREV------AELREQCGAGLVIFDDELSPAQTRNLEEALQVGVLDRTALILDI 137
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F HA T E +LQ ELA Y RL R E + + G +GG +
Sbjct: 138 FAQHARTHEGRLQVELAQYNYMLPRLRRQ---------WSHLERQAGTGGGTSAGGVVGL 188
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+L++ RR I +R + L Q+ +V R R + R R+ G G+ VA+VGYT
Sbjct: 189 RGPGETQLEIDRRLIDQRIAWLKEQLADVHRHRELYRQRRK------GSGVPVVALVGYT 242
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
NAGKSTL++ALS +D+ + +LFATLDP + V LP +LL+DTVGFI LP QLV A
Sbjct: 243 NAGKSTLLNALSGADVLTQDQLFATLDPTTRQVTLPGNHHILLTDTVGFIQKLPTQLVAA 302
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
F ATLEE+ EADLL+HV+D T PN +EH TV + L+++GVS K + V NK+D
Sbjct: 303 FRATLEEINEADLLLHVVDLTHPNAQEHAQTVEKTLEELGVSR---KATLTVLNKVD 356
>gi|297544479|ref|YP_003676781.1| GTP-binding proten HflX [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842254|gb|ADH60770.1| GTP-binding proten HflX [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 413
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 208/386 (53%), Gaps = 41/386 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K + E+ D I VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELKFFVENQEA----DLIIVNDELTGTQIKNMEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE LQ ELA L Y+ RLV + G RL G G
Sbjct: 114 KRARSKEGMLQVELAQLKYRLPRLVGMGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE++R R +QR+ R+++ + VA+VGYTNA
Sbjct: 156 PGETKLEADRRHIQNRIKAIEKKLEEIKRHRDLQRSRRKKNQ------VPVVAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++AL+ ++++ + +LFATLDP + ++LPSGR+V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTKAEVYVEDKLFATLDPTARRLILPSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEVWNKIDYHD 426
+TLEEV ADLL+HV+D T+P++EE V +VL +G N+ I V+NKID +
Sbjct: 270 STLEEVKYADLLLHVIDVTSPDMEEKIKVVERVLSDLGAI-----NIPKINVFNKIDLLE 324
Query: 427 EEMGDVE---YIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGES 483
+ E YI + F + DVE ++ D ++ E +
Sbjct: 325 VVLKGNEREVYISAKNKIGFDNLLEAIEREIFKDVEVVNFLLPYDKTKEYNYLKEK-TKI 383
Query: 484 MNKNHNDYSDGWLLSGDEQDNVEEEF 509
+ +N+N+ DG ++ + Q +E+
Sbjct: 384 IEENYNE--DGIMIKAEVQKETKEKL 407
>gi|366090132|ref|ZP_09456498.1| GTP-binding protein [Lactobacillus acidipiscis KCTC 13900]
Length = 420
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 131/331 (39%), Positives = 187/331 (56%), Gaps = 40/331 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
++FG G + +K N AE+K E + + VN L+ Q RN+E G V+DR LI+EIF
Sbjct: 49 SYFGSGKLIELK---NAAEAK-EANDLIVNDELTPTQLRNIEDETGLTVIDRTALILEIF 104
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AHT+EAKLQ ++A+L Y RL R+R T + GS G GF S
Sbjct: 105 ARRAHTREAKLQVQIASLQY---RLPRLR----------TSSLNRFDQQTAGSSGGGFTS 151
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+++L RR I + +HL Q++EV + +R AR D G+ TVA+VGYT
Sbjct: 152 RGAGETQMELNRRTIQNQITHLRHQLKEVEQEEQTKRKAR------DSSGIKTVALVGYT 205
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
NAGKST ++ L + +F + LFATLD ++ V +++LLSDTVGF+S L
Sbjct: 206 NAGKSTTMNGLLRLTGEAKEKQVFEENMLFATLDTSVRKVQFDDNKEILLSDTVGFVSSL 265
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P QLV+AF TL E +ADLLV V+D + P+ +E T + L+++ V+ MI +
Sbjct: 266 PHQLVEAFKTTLAEAAQADLLVQVIDVSDPHAKEMIKTTEETLREIAVTGIP---MIYAF 322
Query: 420 NKIDYHDEEMGDVEY--IDGDDISNFSRAED 448
NK D + + Y I GD I+ +R +D
Sbjct: 323 NKADMEPQ----LRYPEIAGDQITYSARDDD 349
>gi|289578198|ref|YP_003476825.1| GTP-binding proten HflX [Thermoanaerobacter italicus Ab9]
gi|289527911|gb|ADD02263.1| GTP-binding proten HflX [Thermoanaerobacter italicus Ab9]
Length = 413
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 208/386 (53%), Gaps = 41/386 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K + E+ D I VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELKFFVENQEA----DLIIVNDELTGTQIKNMEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE LQ ELA L Y+ RLV + G RL G G
Sbjct: 114 KRARSKEGMLQVELAQLKYRLPRLVGIGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE++R R +QR+ R+++ + VA+VGYTNA
Sbjct: 156 PGETKLETDRRHIQNRIKAIEKKLEEIKRHRDLQRSRRKKNQ------VPVVAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++AL+ ++++ + +LFATLDP + ++LPSGR+V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTKAEVYVEDKLFATLDPTARRLILPSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEVWNKIDYHD 426
+TLEEV ADLL+HV+D T+P++EE V +VL +G N+ I V+NKID +
Sbjct: 270 STLEEVKYADLLLHVIDVTSPDMEEKIKVVERVLSDLGAI-----NIPKINVFNKIDLLE 324
Query: 427 EEMGDVE---YIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGES 483
+ E YI + F + DVE ++ D ++ E +
Sbjct: 325 VVLKGNEREVYISAKNKIGFDNLLEAIEREIFKDVEVVNFLLPYDKTKEYNYLKEK-TKI 383
Query: 484 MNKNHNDYSDGWLLSGDEQDNVEEEF 509
+ +N+N+ DG ++ + Q +E+
Sbjct: 384 IEENYNE--DGIMIKTEVQKETKEKL 407
>gi|254509743|ref|ZP_05121810.1| GTP-binding proten HflX [Rhodobacteraceae bacterium KLH11]
gi|221533454|gb|EEE36442.1| GTP-binding proten HflX [Rhodobacteraceae bacterium KLH11]
Length = 423
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 129/311 (41%), Positives = 191/311 (61%), Gaps = 29/311 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + ++ +A+A FG G +E + ++ E++ + ++ ++ +QQRNLE+AW
Sbjct: 45 VVGSEIVRLQRAQAGLLFGSGKIEELAERLH----DHEIELVLIDGPVTPVQQRNLEKAW 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 101 KVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAAR +
Sbjct: 149 -----RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLQKVVKTRTLHRAARAKVP-- 201
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKSTL ++L+ +++ + LFATLDP ++ V L G +V+LSDT
Sbjct: 202 ----YPIVALVGYTNAGKSTLFNSLTGAEVMAKDMLFATLDPTMRRVELQDGPEVILSDT 257
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP +LV AF ATLEEV+ ADL+VHV D + + E V +L +GV +++
Sbjct: 258 VGFISNLPTELVAAFRATLEEVLGADLVVHVRDISHEDSEAQAQDVETILASLGVDDDRP 317
Query: 413 KNMIEVWNKID 423
+ +EVWNKID
Sbjct: 318 R--LEVWNKID 326
>gi|399062555|ref|ZP_10746608.1| GTP-binding protein HflX [Novosphingobium sp. AP12]
gi|398033649|gb|EJL26942.1| GTP-binding protein HflX [Novosphingobium sp. AP12]
Length = 470
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 203/399 (50%), Gaps = 74/399 (18%)
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
R +V P+++ P A L+ LEE R E +V++ P
Sbjct: 14 RALVVYPQMRGPRGQMADLDTE----ARLEEARGLALAIGLEVAE-AIAIVIREP----- 63
Query: 123 KARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
RA T FG G ++ I C +N AE + V+ L+ IQQRNLE + V+DR
Sbjct: 64 --RAATLFGEGQIQNISVACELNEAE------LVIVDGSLTAIQQRNLEEKLKRKVIDRT 115
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLI+EIF A T E +LQ ELA L Y+ RLVR T E R
Sbjct: 116 GLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQR 158
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG GF+ G GET+++ RR I +R + + ++E+VRRTR + R R + V
Sbjct: 159 GGFGFLGGPGETQIEADRRLIRDRMAKIRRELEQVRRTRGLHRGRREKAP------WPIV 212
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
A+VGYTNAGKSTL + L+ +++ ++ LFATLDP ++++ LP K +LSDTVGFISDLP
Sbjct: 213 ALVGYTNAGKSTLFNRLTGAEVMAEDLLFATLDPTMRAIRLPGMEKAILSDTVGFISDLP 272
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK-----LKN- 414
QLV AF ATLEEV AD++VHV D P+ E + VL VL +GV + L+N
Sbjct: 273 TQLVAAFRATLEEVTAADVIVHVRDIANPDTEAQKRQVLDVLADLGVLHPQPDARTLRNT 332
Query: 415 -------------------------MIEVWNKIDYHDEE 428
+IEVWNK D D E
Sbjct: 333 AREERAAGWAQEEKDEKADGEPQIPIIEVWNKWDLLDPE 371
>gi|195997495|ref|XP_002108616.1| hypothetical protein TRIADDRAFT_18641 [Trichoplax adhaerens]
gi|190589392|gb|EDV29414.1| hypothetical protein TRIADDRAFT_18641 [Trichoplax adhaerens]
Length = 436
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 180/298 (60%), Gaps = 28/298 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAI-LSGIQQRNLERAWGKPVLDRVGLIIEI 186
TFFG G + +N + K ++ A+F+N L Q++ L++ W PV DR G++++I
Sbjct: 66 TFFGKGKTGELCNLMNKLKQKHQVTAVFLNTTQLQANQRQTLQKLWSLPVYDRYGIVLQI 125
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F HA T+EAK+Q ELA+L Y +S+L +F T EA + RG +
Sbjct: 126 FKRHARTQEAKIQVELASLKYLRSQL----------SF--TVEAYDLD--------RGHL 165
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
AGE+ ++ RR + + L +++++R+ RA R R+R+ + TVAV+GYT
Sbjct: 166 GRAGESGQEIGRRALEYKYRQLSRKLKDIRQKRATVRLKRQRNE------IPTVAVLGYT 219
Query: 307 NAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
NAGK+TL+ AL+ + + +LFATLD + S L SG ++L DT+GFISDLP L++
Sbjct: 220 NAGKTTLIKALTGEKSMIPKDKLFATLDTTVYSGQLISGFQILYIDTIGFISDLPHDLLE 279
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+F ATLE+V+ ADLL+H+ D + P E+ + +VL VL+ + + L+NMIEV NKID
Sbjct: 280 SFSATLEDVINADLLLHIRDISHPETEKQKASVLNVLRDLYLPRTALENMIEVHNKID 337
>gi|359407776|ref|ZP_09200250.1| GTP-binding protein HflX [SAR116 cluster alpha proteobacterium
HIMB100]
gi|356677139|gb|EHI49486.1| GTP-binding protein HflX [SAR116 cluster alpha proteobacterium
HIMB100]
Length = 435
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 204/372 (54%), Gaps = 52/372 (13%)
Query: 65 FLVQPRLKPPT------FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPS 118
F+VQP LK + Q KL+EA LA +++ D KE+
Sbjct: 7 FIVQPELKQASQSGSTRTPQTKLDEAAGLAEAIQ--------LDVVHKEI---------- 48
Query: 119 LKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLD 178
+ K R+ T+ GPG V+ + G + +N LS +Q RNLE A V+D
Sbjct: 49 ITLSKPRSGTYLGPGVVD----RLAGLAEYHDHPLFIINTSLSPVQHRNLETALKCKVID 104
Query: 179 RVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR 238
R LI+EIF A A T +LQ ELAAL ++KSRLVR T E R
Sbjct: 105 RTALILEIFGARASTHAGRLQVELAALSFQKSRLVR------SWTHLE-----------R 147
Query: 239 GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
GG GF+ G GE +++L RR + ++ + ++ +V RTR +QR R D
Sbjct: 148 QRGGGGFLGGPGERQIELDRRMLTDQVKQIKKELSDVERTRGLQRRNR------DRSETP 201
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
T+A+VGYTNAGKSTL + L+ +D+ S LFATLDP ++ + LPSGR+++L+DTVGFIS
Sbjct: 202 TIALVGYTNAGKSTLFNRLTGADVLSKDMLFATLDPTMRGMHLPSGRQIVLADTVGFISA 261
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN-MIE 417
LP +LV+AF +TLEEVV+ADL++HV D ++ E V VL +G E+ + ++
Sbjct: 262 LPTELVEAFKSTLEEVVQADLILHVHDMSSELCAEEALDVATVLDDIGFDEQARDDRILH 321
Query: 418 VWNKIDYHDEEM 429
++NK D E++
Sbjct: 322 IFNKADAAVEDV 333
>gi|126731325|ref|ZP_01747132.1| GTP-binding protein HflX [Sagittula stellata E-37]
gi|126708236|gb|EBA07295.1| GTP-binding protein HflX [Sagittula stellata E-37]
Length = 396
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 201/354 (56%), Gaps = 44/354 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
FG G + +K I + E++ + V+ ++ +QQRNLER W +LDR GLI+EIF+
Sbjct: 34 LFGSGKISELKELI----LENEVELVLVDGPVTPVQQRNLEREWKVKLLDRTGLILEIFS 89
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E LQ E+AAL Y+++RLVR T E R GG GF+ G
Sbjct: 90 DRAATREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQRGGLGFVGG 132
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+++ RR I E+ L Q+E+V +TR + R AR + VA+VGYTNA
Sbjct: 133 PGETQIEADRRAIDEQLVRLRRQLEKVVKTRELHRKARAKVP------YPIVALVGYTNA 186
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ +++ + LFATLDP +++V LP+G V+LSDTVGFISDLP +LV AF
Sbjct: 187 GKSTLFNRLTGAEVMAKDMLFATLDPTMRAVRLPTGADVILSDTVGFISDLPTELVAAFR 246
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
ATLEEV+ AD++VHV D + P + V +L +GV E IE+WNKID
Sbjct: 247 ATLEEVLAADVIVHVRDISHPETDAQAEDVRTILDGLGVDEG--TPQIELWNKIDRLS-- 302
Query: 429 MGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGE 482
GDV+ ++ +RA D+D + + G+ D V+E LGE
Sbjct: 303 -GDVK------VATEARA-DRDA-----GIFAVSAVTGEGLDGFLDAVTEALGE 343
>gi|148656458|ref|YP_001276663.1| small GTP-binding protein [Roseiflexus sp. RS-1]
gi|148568568|gb|ABQ90713.1| small GTP-binding protein [Roseiflexus sp. RS-1]
Length = 454
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 170/295 (57%), Gaps = 23/295 (7%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F GPG +E I + D + + L+ Q RN+E A VLDR GLI++IF
Sbjct: 76 FIGPGKIEEIAA----LRDTLQYDLVVFDDELTPGQARNVEDALQTRVLDRTGLILDIFA 131
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA T E ++Q ELA Y RL R + T E S+ G G RG
Sbjct: 132 RHAQTHEGRVQVELAQYRYLLPRLRR------QWTHLERQAGGGGSSAGGVVGLRG---- 181
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I R L QIEEV R R V R RR+ G + +A+VGYTNA
Sbjct: 182 PGETQLEVDRRLIARRIQWLEQQIEEVHRHREVYRERRRQSG------IPVIAIVGYTNA 235
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++ALS +++ ++ RLFATLDP + V LP G++ LL+DTVGFI LP QLV AF
Sbjct: 236 GKSTLLNALSGANVRAEDRLFATLDPTTRQVTLPGGQQALLTDTVGFIQKLPTQLVAAFR 295
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEE+ EAD+L+HVLD T PN + TVL L+ + V + + +I V NK+D
Sbjct: 296 ATLEEIREADVLLHVLDITHPNAAQQTQTVLDTLRDLHVED---RPIITVLNKVD 347
>gi|315646583|ref|ZP_07899701.1| GTP-binding proten HflX [Paenibacillus vortex V453]
gi|315278226|gb|EFU41546.1| GTP-binding proten HflX [Paenibacillus vortex V453]
Length = 429
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/312 (40%), Positives = 182/312 (58%), Gaps = 35/312 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+ QN + K F G G VE ++ I+G G AIF + LSG Q RNLE +
Sbjct: 54 VITQNREVPDSKW----FIGKGKVEELRMAIDGL---GATTAIF-DQELSGAQVRNLEES 105
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI++IF A T+E +Q ELA L Y RL +G +
Sbjct: 106 LDVKIIDRTQLILDIFAQRAKTREGIVQVELAQLTYLLPRL--------------SGHGK 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+S G G G RG GE++L+ RR I +R S L Q++E+ R R++ R R++ G
Sbjct: 152 NLSRLGAGIGTRG----PGESKLETDRRHIRDRISDLKRQLDEMTRHRSLHRERRKKSGA 207
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
VA+VGYTNAGKSTL++ L+ +D++ + +LFATLDP +++ LPSG++V+L+D
Sbjct: 208 ------VQVALVGYTNAGKSTLLNRLTAADVYIEDQLFATLDPTSRALELPSGKEVVLTD 261
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV AF ATLEE EADL++HV+D ++P +E V +LQ +G ++
Sbjct: 262 TVGFIQNLPHDLVAAFRATLEEANEADLILHVVDSSSPMRDEQMAVVHSILQDLGAAD-- 319
Query: 412 LKNMIEVWNKID 423
K I ++NK D
Sbjct: 320 -KPQIVLFNKKD 330
>gi|395493250|ref|ZP_10424829.1| HSR1-like GTP-binding protein [Sphingomonas sp. PAMC 26617]
Length = 430
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 183/320 (57%), Gaps = 30/320 (9%)
Query: 108 LPPHV-VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
+ HV VV ++K + T G G +E + + AE+ + + +A L+ +QQR
Sbjct: 44 MAIHVEVVDRVAVKVRALQPATLIGKGQLEALAATVRMAEA----ELVVFDASLTPVQQR 99
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLE+A V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 100 NLEKALSAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE 153
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
R GG GF+ G GET+++ RR I +R + L ++E+V RTR + R R
Sbjct: 154 -----------RQRGGFGFLGGPGETQIEADRRLIRDRMARLKKELEQVSRTRGLHRDRR 202
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRK 346
+R +A+VGYTNAGKSTL + ++ +D+ ++ LFATLDP L+ + LP K
Sbjct: 203 QRAPWP------VIALVGYTNAGKSTLFNRMTGADVMAEDLLFATLDPTLRQIALPGIDK 256
Query: 347 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 406
+LSDTVGF+S+LP QLV AF ATLEEVV ADLL+HV D P+ + V VL+ +G
Sbjct: 257 AILSDTVGFVSELPTQLVAAFKATLEEVVSADLLIHVRDIAHPDTIAQKDDVEAVLRDIG 316
Query: 407 VSEEKLKNMIEVWNKIDYHD 426
V + IE WNK+D D
Sbjct: 317 VDASVPR--IEAWNKLDLLD 334
>gi|329930826|ref|ZP_08284225.1| GTP-binding protein HflX [Paenibacillus sp. HGF5]
gi|328934528|gb|EGG31033.1| GTP-binding protein HflX [Paenibacillus sp. HGF5]
Length = 430
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/312 (40%), Positives = 180/312 (57%), Gaps = 35/312 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+ QN + K F G G VE ++ I+G G AIF + LSG Q RNLE +
Sbjct: 54 VITQNREVPDSKW----FIGKGKVEELRMAIDGL---GATTAIF-DQELSGAQVRNLEES 105
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI++IF A T+E +Q ELA L Y RL +G +
Sbjct: 106 LDVKIIDRTQLILDIFAQRAKTREGIIQVELAQLTYLLPRL--------------SGHGK 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+S G G G RG GE++L+ RR I +R S L Q++EV R R + R R++ G
Sbjct: 152 NLSRLGAGIGTRG----PGESKLETDRRHIRDRISDLKRQLDEVTRHRTLHRERRKKSGA 207
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+A+VGYTNAGKSTL++ L+ +D++ + +LFATLDP + + LPSG++V+L+D
Sbjct: 208 ------VQIALVGYTNAGKSTLLNRLTAADVYIENQLFATLDPTSRVLELPSGKEVVLTD 261
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV AF ATLEE EADL++HV+D ++P +E V +LQ +G ++
Sbjct: 262 TVGFIQNLPHDLVAAFRATLEEANEADLILHVVDASSPMRDEQMAVVQSILQDLGAAD-- 319
Query: 412 LKNMIEVWNKID 423
K I ++NK D
Sbjct: 320 -KPQIVLFNKKD 330
>gi|393718426|ref|ZP_10338353.1| HSR1-like GTP-binding protein [Sphingomonas echinoides ATCC 14820]
Length = 428
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 183/320 (57%), Gaps = 30/320 (9%)
Query: 108 LPPHV-VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
+ HV VV ++K + T G G +E + + AE+ + + +A L+ +QQR
Sbjct: 44 MAIHVEVVDRVAIKVRALQPSTLIGKGQLEALAATVRMAEA----ELVVFDASLTPVQQR 99
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLE+A V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 100 NLEKALSAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE 153
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
R GG GF+ G GET+++ RR I +R + L ++E+V RTR + R R
Sbjct: 154 -----------RQRGGFGFLGGPGETQIEADRRLIRDRMARLKKELEQVSRTRGLHRDRR 202
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRK 346
+R +A+VGYTNAGKSTL + ++ +D+ ++ LFATLDP L+ + LP K
Sbjct: 203 QRAPWP------VIALVGYTNAGKSTLFNRMTGADVMAEDLLFATLDPTLRQIALPGIDK 256
Query: 347 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 406
+LSDTVGF+S+LP QLV AF ATLEEVV ADLL+HV D P+ + V VL+ +G
Sbjct: 257 AILSDTVGFVSELPTQLVAAFKATLEEVVSADLLIHVRDIAHPDTIAQKDDVEAVLRDIG 316
Query: 407 VSEEKLKNMIEVWNKIDYHD 426
V + IE WNK+D D
Sbjct: 317 VDLSVPR--IEAWNKLDMLD 334
>gi|87199949|ref|YP_497206.1| small GTP-binding protein domain-containing protein
[Novosphingobium aromaticivorans DSM 12444]
gi|87135630|gb|ABD26372.1| Small GTP-binding protein domain [Novosphingobium aromaticivorans
DSM 12444]
Length = 426
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 178/318 (55%), Gaps = 29/318 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ L R T FG G VE I N +S EL + V+ LS IQQRNLE
Sbjct: 36 VVEAFILPIRTVRPATLFGEGQVERIAVACN--QSDAEL--VIVDGALSAIQQRNLEEKL 91
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+ V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 92 KRKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE------ 139
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I R + L ++E+VRRTR + R R+R
Sbjct: 140 -----RQRGGFGFLGGPGETQIEADRRLIRNRMARLRRELEQVRRTRGLHRERRQRAPWP 194
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+A+VGYTNAGKSTL + L+ +D+ ++ LFATLDP ++++ LP K +LSDT
Sbjct: 195 ------VIALVGYTNAGKSTLFNRLTGADVMAEDLLFATLDPTMRAIRLPGVEKAILSDT 248
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFISDLP QLV AF ATLEEV AD++VHV D + + V Q+L +GV E
Sbjct: 249 VGFISDLPTQLVAAFRATLEEVTAADVIVHVRDVANLASADQKAEVEQILADLGVIGEAG 308
Query: 413 KN--MIEVWNKIDYHDEE 428
++E WNK D E
Sbjct: 309 STIPIVEAWNKWDLLTPE 326
>gi|359401668|ref|ZP_09194635.1| GTP-binding protein HflX [Novosphingobium pentaromativorans US6-1]
gi|357597008|gb|EHJ58759.1| GTP-binding protein HflX [Novosphingobium pentaromativorans US6-1]
Length = 446
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 178/313 (56%), Gaps = 42/313 (13%)
Query: 125 RADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
R T FG G ++ I C +N AE I V+ LS IQQRNLE + + V+DR GL
Sbjct: 60 RPGTLFGEGQIQNIATACELNEAE------LIIVDGSLSAIQQRNLEEKFKRKVIDRTGL 113
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A T E +LQ ELA L Y+ RLVR T E R GG
Sbjct: 114 ILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGG 156
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
GF+ G GET+++ RR I +R + + ++E+VRRTR + R R + VA+
Sbjct: 157 FGFLGGPGETQIEADRRMIRDRMAKIRRELEQVRRTRGLHRDRREKAP------WPIVAL 210
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + L+ +++ + LFATLDP ++++ LP K +LSDTVGFISDLP Q
Sbjct: 211 VGYTNAGKSTLFNRLTGAEVMAQNLLFATLDPTMRAIRLPGVEKAILSDTVGFISDLPTQ 270
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN-------- 414
LV AF ATLEEV ADL++HV D P+ + + VL VL +GV ++ +
Sbjct: 271 LVAAFRATLEEVTAADLILHVRDIANPDTDAQKRQVLDVLGDLGVLGSEVDDEAEEGAEP 330
Query: 415 ---MIEVWNKIDY 424
+IE+WNK D
Sbjct: 331 GIPIIELWNKWDL 343
>gi|402822216|ref|ZP_10871714.1| GTP-binding protein HflX [Sphingomonas sp. LH128]
gi|402264240|gb|EJU14105.1| GTP-binding protein HflX [Sphingomonas sp. LH128]
Length = 464
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/341 (39%), Positives = 185/341 (54%), Gaps = 56/341 (16%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLER 170
VV+ ++ +AR T FG G ++ I C +N AE I V+ LS IQQRNLE
Sbjct: 52 VVEAMAIVIREARPGTLFGEGQIQNISTACTLNEAE------LIIVDGSLSAIQQRNLEE 105
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
+ V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 106 KLKRKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE---- 155
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
R GG GF+ G GET+++ RR I +R + + ++E+VRRTR + R R +
Sbjct: 156 -------RQRGGFGFLGGPGETQIEADRRMIRDRMAKIRRELEQVRRTRGLHRDRREKAP 208
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
VA+VGYTNAGKSTL + L+ + + ++ LFATLDP ++++ +P K +LS
Sbjct: 209 ------WPVVALVGYTNAGKSTLFNRLTGASVMAENLLFATLDPTMRAIRMPGLEKAILS 262
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGFISDLP +L+ AF ATLEEV AD+++HV D P+ E + VL VL +GV +
Sbjct: 263 DTVGFISDLPTELIAAFRATLEEVTAADVILHVRDIANPDTEAQKRQVLDVLADLGVIQP 322
Query: 411 KLKN-------------------------MIEVWNKIDYHD 426
L + +IEVWNK D D
Sbjct: 323 PLDDRKARQAPALDWSDDEPDDEPEPQVPIIEVWNKWDLLD 363
>gi|103486757|ref|YP_616318.1| HSR1-like GTP-binding protein [Sphingopyxis alaskensis RB2256]
gi|98976834|gb|ABF52985.1| GTP-binding protein, HSR1-related [Sphingopyxis alaskensis RB2256]
Length = 432
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/320 (41%), Positives = 179/320 (55%), Gaps = 36/320 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV L+ + RA T G G +E I I ++G + + V+A L+ IQQRNLE A+
Sbjct: 34 VVAIHRLRLRQTRAATLLGVGQIEAIVPDI---AARG-VQLVVVDASLTAIQQRNLETAF 89
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 90 GTKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE------ 137
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I R + + +E+ RRTR +QR R+R
Sbjct: 138 -----RQRGGFGFLGGPGETQIEADRRMIRNRMARIRRSLEDARRTRQLQRTKRQRAP-- 190
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+A+VGYTNAGKST + L+ SD+ ++ LFATLDP ++ + LP K +LSDT
Sbjct: 191 ----WPVIALVGYTNAGKSTFFNRLTGSDVMAEDMLFATLDPTMREIRLPGIDKAILSDT 246
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS---- 408
VGF+SDLP +LV AF ATLEEV ADL+VHV D P+ + V +L +GV+
Sbjct: 247 VGFVSDLPTELVAAFRATLEEVTTADLIVHVRDIVHPDTDAQYEDVRAILDSLGVNGPQD 306
Query: 409 -----EEKLKNMIEVWNKID 423
IE+WNK+D
Sbjct: 307 GEGADTASAIPQIEIWNKVD 326
>gi|294011655|ref|YP_003545115.1| GTP-binding protein HflX [Sphingobium japonicum UT26S]
gi|292674985|dbj|BAI96503.1| GTP-binding protein HflX [Sphingobium japonicum UT26S]
Length = 443
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 204/384 (53%), Gaps = 57/384 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I E+ + + V+ LS +QQ NLE+A V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLARMEEA----ELVIVDNALSPVQQSNLEKATETKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V +TR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTKTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + ++ + + ++ LFATLDP ++ + LP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRMTGAAVMAEDLLFATLDPTMRQIALPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL---------KNMIEV 418
ATLEEV+ ADL+VHV D P+ + R V+ VL ++G++ E +IE
Sbjct: 279 RATLEEVLSADLIVHVRDIAHPDSDAQRDDVMDVLGELGIAGEGAFEAGEGEEPPPIIEA 338
Query: 419 WNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE 478
WNK+D DE D + +R +T + DV + G+ D+ VS
Sbjct: 339 WNKLDLLDE-----------DAATLAR----ETATRRSDVVVLSALTGEGVDDLQRAVSA 383
Query: 479 DL--GESMNKNHNDYSDG----WL 496
L G +++ H +DG WL
Sbjct: 384 RLTAGAQIHRLHVPLADGAAMAWL 407
>gi|334142000|ref|YP_004535207.1| GTP-binding protein HflX [Novosphingobium sp. PP1Y]
gi|333940031|emb|CCA93389.1| GTP-binding protein HflX [Novosphingobium sp. PP1Y]
Length = 425
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 175/313 (55%), Gaps = 42/313 (13%)
Query: 125 RADTFFGPGTVETI--KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
RA T FG G ++ I C +N AE I V+ LS IQQRNLE + V+DR GL
Sbjct: 39 RAGTLFGEGQIQNIGTACELNEAE------LIIVDGSLSAIQQRNLEEKLKRKVIDRTGL 92
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A T E +LQ ELA L Y+ RLVR T E R GG
Sbjct: 93 ILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGG 135
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
GF+ G GET+++ RR I +R + + ++E+VRRTR + R R + VA+
Sbjct: 136 FGFLGGPGETQIEADRRMIRDRMAKIRRELEQVRRTRGLHRDRREKAP------WPIVAL 189
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + L+ + + + LFATLDP ++++ LP K +LSDTVGFISDLP Q
Sbjct: 190 VGYTNAGKSTLFNRLTGAGVMAQDLLFATLDPTMRAIRLPGVEKAILSDTVGFISDLPTQ 249
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV-----------SEEK 411
LV AF ATLEEV ADL++HV D P+ + + VL VL +GV E
Sbjct: 250 LVAAFRATLEEVTAADLILHVRDIANPDTDAQKRQVLDVLGDLGVLGSVVDDDVEEGAEP 309
Query: 412 LKNMIEVWNKIDY 424
+IE+WNK D
Sbjct: 310 GIPIIELWNKWDL 322
>gi|357974354|ref|ZP_09138325.1| GTP-binding protein, HSR1-like [Sphingomonas sp. KC8]
Length = 432
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 180/312 (57%), Gaps = 28/312 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + + + T FG G V+TI + AE+ + + V+ LS IQQRNLE+A
Sbjct: 51 VVEKMAFRLRDPKPATLFGSGQVDTIATAVRMAEA----ELVIVDGALSPIQQRNLEKAL 106
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 107 DVKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE------ 154
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L ++E V RTR + RA R+R
Sbjct: 155 -----RQRGGFGFLGGPGETQIEADRRMIRDRMAKLRRELENVTRTRGLHRARRQRAPWP 209
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+A+VGYTNAGKSTL + ++ + + ++ LFATLDP ++ + LP K +LSDT
Sbjct: 210 ------VIALVGYTNAGKSTLFNRMTGATVMAENLLFATLDPTMRQISLPGIDKAILSDT 263
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+SDLP QLV AF ATLEEV ADL+VHV D + P+ E V VL ++G+ +
Sbjct: 264 VGFVSDLPTQLVAAFRATLEEVTAADLIVHVRDISHPDTEAQAADVAAVLAEIGIGGGEG 323
Query: 413 KNMI-EVWNKID 423
I E WNK+D
Sbjct: 324 GIPIFEAWNKLD 335
>gi|282889986|ref|ZP_06298521.1| hypothetical protein pah_c008o089 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500179|gb|EFB42463.1| hypothetical protein pah_c008o089 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 451
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/317 (40%), Positives = 187/317 (58%), Gaps = 28/317 (8%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
+V + P L K A TF G +E + + D I + +S QQRNLE+A
Sbjct: 68 IVAKVPCL-IRKVDAATFVTQGKLE----ELITLSKECAADLIIFDDEISPSQQRNLEKA 122
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
+ V+DR +I+E+F A TKEA+LQ E A + Y+ RL R+ R
Sbjct: 123 FQLTVMDRTEVILEVFAQRAKTKEARLQIEYARVKYQAPRLKRLWSHLSR---------- 172
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
G+GG ++ G GE ++++ RR I +R L S+I+EV+ R +QR AR R
Sbjct: 173 --QHGSGGAGGGAYLKGEGEKQIEIDRRLIKKRLEQLQSEIQEVKEHREIQRVARTRSA- 229
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ A+VGYTNAGKSTL++AL+D+D+F + +LFATLD + L +G++VL++D
Sbjct: 230 -----IPVFALVGYTNAGKSTLLNALTDADVFVEDKLFATLDTTTRKFPLSTGQEVLVTD 284
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP-NLEEHRTTVLQVLQQVGVSEE 410
TVGFI LP LV AF +TLEE ++AD+L+HV+D T P LE+ RTT+ QVL+++GV +
Sbjct: 285 TVGFIRKLPHLLVAAFKSTLEEAIQADILLHVIDATHPMALEQARTTI-QVLKELGVGD- 342
Query: 411 KLKNMIEVWNKIDYHDE 427
K +I V NKID ++
Sbjct: 343 --KPIITVLNKIDQAEQ 357
>gi|407973165|ref|ZP_11154077.1| GTP-binding proten HflX [Nitratireductor indicus C115]
gi|407431006|gb|EKF43678.1| GTP-binding proten HflX [Nitratireductor indicus C115]
Length = 436
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/264 (46%), Positives = 161/264 (60%), Gaps = 23/264 (8%)
Query: 160 LSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPD 219
L+ +QQRNLE+A VLDR GLI+EIF A TKE +LQ +LA L Y++ RLVR
Sbjct: 91 LTPVQQRNLEKALNAKVLDRTGLILEIFGRRARTKEGRLQVDLAHLEYQRGRLVR----- 145
Query: 220 GRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTR 279
T E R GG GF+ G GET+++ RR + ++ L ++E VRRTR
Sbjct: 146 -SWTHLE-----------RQRGGGGFMGGPGETQIEADRRLLQDKIVRLKRELETVRRTR 193
Query: 280 AVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSV 339
+ R+ RR+ VA+VGYTNAGKSTL + L+ + + ++ LFATLDP L+ V
Sbjct: 194 DLHRSKRRKVP------FPIVAIVGYTNAGKSTLFNRLTGASVMAEDMLFATLDPTLRRV 247
Query: 340 VLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVL 399
LP G V+LSDTVGFISDLP LV AF ATLEEVVEADL++H+ D + P+ V
Sbjct: 248 QLPHGTTVILSDTVGFISDLPTHLVAAFRATLEEVVEADLIIHLRDISDPDSSAQANDVA 307
Query: 400 QVLQQVGVSEEKLKNMIEVWNKID 423
+L +GV ++EVWNKID
Sbjct: 308 SILGDLGVDAADKTRVLEVWNKID 331
>gi|347528178|ref|YP_004834925.1| putative GTP-binding protein HflX [Sphingobium sp. SYK-6]
gi|345136859|dbj|BAK66468.1| putative GTP-binding protein HflX [Sphingobium sp. SYK-6]
Length = 439
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/331 (39%), Positives = 182/331 (54%), Gaps = 47/331 (14%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + ++R FG G VE I + AE+ + + V+ L+ +QQ NLE+AW
Sbjct: 31 VVETGVWRVRQSRPAALFGSGQVEEIGALVAQAEA----ELVVVDNNLTPVQQSNLEKAW 86
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 87 SAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE------ 134
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + + ++++V RTR + RA R+R
Sbjct: 135 -----RQRGGFGFLGGPGETQIEADRRMIRDRMARIRRELDQVTRTRGLHRARRQRAP-- 187
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+A+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ + LP K +LSDT
Sbjct: 188 ----WPVIALVGYTNAGKSTLFNRLTGADVMAQDMLFATLDPTMRQISLPGIDKAILSDT 243
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE-- 410
VGF+SDLP QL+ AF ATLEEV+ ADL++HV D P+ E + VL VL +G +
Sbjct: 244 VGFVSDLPHQLIAAFRATLEEVLSADLILHVRDIAHPDTEAQKADVLDVLADLGAAPADE 303
Query: 411 ------------------KLKNMIEVWNKID 423
+ +IE+WNK D
Sbjct: 304 DGSAGKAEAPDAAHEGGGPVAPIIEIWNKAD 334
>gi|338175488|ref|YP_004652298.1| GTP-binding protein HflX [Parachlamydia acanthamoebae UV-7]
gi|336479846|emb|CCB86444.1| GTP-binding protein hflX [Parachlamydia acanthamoebae UV-7]
Length = 436
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/317 (40%), Positives = 187/317 (58%), Gaps = 28/317 (8%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
+V + P L K A TF G +E + + D I + +S QQRNLE+A
Sbjct: 53 IVAKVPCLIR-KVDAATFVTQGKLE----ELITLSKECAADLIIFDDEISPSQQRNLEKA 107
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
+ V+DR +I+E+F A TKEA+LQ E A + Y+ RL R+ R
Sbjct: 108 FQLTVMDRTEVILEVFAQRAKTKEARLQIEYARVKYQAPRLKRLWSHLSR---------- 157
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
G+GG ++ G GE ++++ RR I +R L S+I+EV+ R +QR AR R
Sbjct: 158 --QHGSGGAGGGAYLKGEGEKQIEIDRRLIKKRLEQLQSEIQEVKEHREIQRVARTRSA- 214
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ A+VGYTNAGKSTL++AL+D+D+F + +LFATLD + L +G++VL++D
Sbjct: 215 -----IPVFALVGYTNAGKSTLLNALTDADVFVEDKLFATLDTTTRKFPLSTGQEVLVTD 269
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP-NLEEHRTTVLQVLQQVGVSEE 410
TVGFI LP LV AF +TLEE ++AD+L+HV+D T P LE+ RTT+ QVL+++GV +
Sbjct: 270 TVGFIRKLPHLLVAAFKSTLEEAIQADILLHVIDATHPMALEQARTTI-QVLKELGVGD- 327
Query: 411 KLKNMIEVWNKIDYHDE 427
K +I V NKID ++
Sbjct: 328 --KPIITVLNKIDQAEQ 342
>gi|121533669|ref|ZP_01665496.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
gi|121307660|gb|EAX48575.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
Length = 597
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 179/308 (58%), Gaps = 51/308 (16%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G V IN +++ I + LS QQRNLE+A G VLDR LI++
Sbjct: 233 AAFFIGRGKVH----EINLLRQSKDINLIIFDDELSPAQQRNLEQALGVKVLDRTALILD 288
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T+E KLQ ELA L Y RL GG+G
Sbjct: 289 IFAQRARTREGKLQVELAQLRYNLPRL----------------------------GGQGL 320
Query: 246 I----------SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGR 295
+ G GET+L++ +RRI ER + + ++IE++++ R++ R R+R
Sbjct: 321 VLSRLGGGIGTRGPGETKLEVDKRRIRERIADIEAEIEQIKKHRSLHRERRQRAH----- 375
Query: 296 GLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
+ T+A+VGYTNAGKSTL++ L+++ + ++ +LFATLDP + + LP+G++ LL+DTVGF
Sbjct: 376 -VPTLALVGYTNAGKSTLLNTLTNASVLAEDKLFATLDPTTRRLKLPNGQEALLTDTVGF 434
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
I LP QL+ AF ATLEEVV ADLL+H++D + P EE +V +VL+++ + K++
Sbjct: 435 IQKLPHQLIAAFRATLEEVVYADLLLHIVDASHPRYEEQMDSVFEVLREL---QADTKDI 491
Query: 416 IEVWNKID 423
I V+NKID
Sbjct: 492 ITVFNKID 499
>gi|326390100|ref|ZP_08211661.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus JW 200]
gi|325993748|gb|EGD52179.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus JW 200]
Length = 413
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/296 (41%), Positives = 178/296 (60%), Gaps = 33/296 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K AE++ E+D + VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELKFF---AENQ-EVDLVIVNDELTGTQIKNMEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE LQ ELA L Y+ RL + G RL G G
Sbjct: 114 KRAKSKEGMLQVELAQLKYRLPRLAGLGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE+ R R++QR R+++ + +A+VGYTNA
Sbjct: 156 PGETKLETDRRHIKNRIKAIEKKLEEIERHRSLQRERRKKNR------IPVIAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++AL++++++ + +LFATLDP + +VLPSGR+V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTNAEVYVENKLFATLDPTARRLVLPSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG-VSEEKLKNMIEVWNKID 423
+TLEEV ADLL+HV+D T+P++EE V +VL +G ++ K I V+NKID
Sbjct: 270 STLEEVKYADLLLHVIDVTSPDMEEKIKVVEKVLSDLGAINTPK----INVFNKID 321
>gi|357384449|ref|YP_004899173.1| GTP-binding protein HflX [Pelagibacterium halotolerans B2]
gi|351593086|gb|AEQ51423.1| GTP-binding protein HflX [Pelagibacterium halotolerans B2]
Length = 451
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 177/296 (59%), Gaps = 28/296 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G V+ + A+ K +++ + V+A LS IQQRNLER G VLDR LI+EIF
Sbjct: 72 TYLGGGQVQQLA---EWAKEK-DIELLVVDAPLSPIQQRNLEREIGVKVLDRTALILEIF 127
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T+E LQ ELA L Y+K RLVR T E R GG GF+
Sbjct: 128 GERAATREGVLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLG 170
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR+I +R L ++++VRRTR +QR R D VA+VGYTN
Sbjct: 171 GPGETQIESDRRQIQDRILVLERRLDKVRRTRQLQRGPR------DSVPFPVVALVGYTN 224
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKS+L +A++ S + ++ LFATLD ++ LP GR ++LSDTVGFISDLP LV AF
Sbjct: 225 AGKSSLFNAITGSGVMAENLLFATLDTTVRRATLPHGRDIILSDTVGFISDLPTDLVAAF 284
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
TLEEV +A +++HV D + P+ VL VL +GV+ E +IEVWNKID
Sbjct: 285 RGTLEEVTQAQVILHVRDVSNPDHPAQANDVLSVLASLGVTGEA-TPIIEVWNKID 339
>gi|94496399|ref|ZP_01302976.1| GTPase [Sphingomonas sp. SKA58]
gi|94424145|gb|EAT09169.1| GTPase [Sphingomonas sp. SKA58]
Length = 444
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 177/309 (57%), Gaps = 37/309 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I E+ + I V+ LS +QQ NLE+A V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLARQEEA----ELIIVDNSLSPVQQSNLEKACEAKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V RTR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTRTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + L+ +++ ++ LFATLDP ++ + LP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRLTGAEVMAEDLLFATLDPTMRQIALPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN----------MIE 417
ATLEEV+ ADL+VHV D P+ + R VL VL ++GV+ E +IE
Sbjct: 279 RATLEEVLSADLIVHVRDIAHPDSDAQRDDVLDVLGELGVTGEAALERGEGTSEPPPIIE 338
Query: 418 VWNKIDYHD 426
WNK+D D
Sbjct: 339 AWNKLDLLD 347
>gi|254876863|ref|ZP_05249573.1| protease, GTP-binding subunit [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842884|gb|EET21298.1| protease, GTP-binding subunit [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 435
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 185/312 (59%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+++ + F G G +E IK + E D + N LS Q+RN+E+
Sbjct: 43 VVLESLDFNHPEPDIKYFCGMGKMEMIK----NKRDELEADLVVFNHPLSPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECKIMDRTRLILEIFSLRAKTHEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL+++G+++
Sbjct: 256 TVGFIKNLPHDLVEAFHATLEEAIESDLLVHVIDYADEDYKSYIEQVEKVLKEIGIAD-- 313
Query: 412 LKNMIEVWNKID 423
K MI V+NKID
Sbjct: 314 -KEMICVYNKID 324
>gi|350564811|ref|ZP_08933627.1| GTP-binding proten HflX [Thioalkalimicrobium aerophilum AL3]
gi|349777513|gb|EGZ31877.1| GTP-binding proten HflX [Thioalkalimicrobium aerophilum AL3]
Length = 436
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 176/298 (59%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G ++ + A + + D + N LS Q+RN+ER V+DRVGLI++
Sbjct: 58 AKLFIGSGKLDEVAA----AVALHQADVVIFNHALSPGQERNIERVVKARVIDRVGLILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L + +RLVR G T R GG G
Sbjct: 114 IFAQRARSHEGKLQVELAQLRHMSTRLVR----------GWTHLE-------RQKGGIG- 155
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ +R + ER HLL +IE+VR+ RA+ R +R+R SD T+ +VGY
Sbjct: 156 LRGPGETQLESDKRLLQERIKHLLKRIEKVRKQRALGRQSRQR---SDH---PTITLVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ +D++++ RLFATLD L+SV LP G + +L+DTVGFI +P LV
Sbjct: 210 TNAGKSTLFNQLTAADVYAENRLFATLDATLRSVHLPGGGQAILADTVGFIRHIPHDLVT 269
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF +TLEE EADLL+H++D P ++ V QV+ +VG ++ + V+NKID
Sbjct: 270 AFRSTLEETSEADLLIHLIDAADPLRDDKIAQVQQVITEVGANDVP---QLLVFNKID 324
>gi|23011756|ref|ZP_00052024.1| COG2262: GTPases [Magnetospirillum magnetotacticum MS-1]
Length = 376
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 123/278 (44%), Positives = 169/278 (60%), Gaps = 24/278 (8%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
E+ + ++ L+ +QQRNLE+AWG V+DR GLI+EIF A T+E LQ E A L Y++
Sbjct: 9 EIGLVVMDCALTPVQQRNLEKAWGAKVIDRTGLILEIFGRRASTREGTLQVEHAHLAYQR 68
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
SRLVR T E R GG GF+ G GET+++ RR I ER + +
Sbjct: 69 SRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEADRRMIQERMTRIE 111
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
++ V RTR + R +R R VA+VGYTNAGKSTL +AL+ +++ + LF
Sbjct: 112 RDLDAVTRTRGLHRKSRARVP------YPIVALVGYTNAGKSTLFNALTKAEVKAQDMLF 165
Query: 330 ATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 389
ATLDP ++ LP G V+LSDTVGFISDLP L+ AF ATLE+V+EAD+L+HV D +
Sbjct: 166 ATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEADILLHVRDVSHG 225
Query: 390 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+ + V VL+++G+ + +IEVWNK D DE
Sbjct: 226 DTQAQAEDVEAVLRELGIKADA-DRIIEVWNKADLLDE 262
>gi|156743087|ref|YP_001433216.1| small GTP-binding protein [Roseiflexus castenholzii DSM 13941]
gi|156234415|gb|ABU59198.1| small GTP-binding protein [Roseiflexus castenholzii DSM 13941]
Length = 454
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 168/295 (56%), Gaps = 23/295 (7%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F GPG +E I D + + L+ Q RN+E A VLDR GLI++IF
Sbjct: 76 FIGPGKIE----EIAALRDTLHYDLVVFDDELTPAQARNVEDALQTRVLDRTGLILDIFA 131
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA T E ++Q ELA Y RL R + T E ++ G G RG
Sbjct: 132 RHAQTHEGRVQVELAQYRYLLPRLRR------QWTHLERQAGGGGASAGGVVGLRG---- 181
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I R L QIEEV R R V R RR+ G + VA+VGYTNA
Sbjct: 182 PGETQLEVDRRLIARRIQWLEQQIEEVHRHREVYRERRRQSG------IPVVAIVGYTNA 235
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++ALS +++ ++ RLFATLDP + V LP G+++LL+DTVGFI LP LV AF
Sbjct: 236 GKSTLLNALSGANVRAEDRLFATLDPTTRQVTLPGGQQILLTDTVGFIQKLPTHLVAAFR 295
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEE+ EAD+++HVLD T PN + TVL L+ + V + + + V NK+D
Sbjct: 296 ATLEEIREADVVLHVLDITHPNAAQQTQTVLDTLRDLQVED---RPTLTVLNKVD 347
>gi|337755594|ref|YP_004648105.1| GTP-binding protein HflX [Francisella sp. TX077308]
gi|336447199|gb|AEI36505.1| GTP-binding protein HflX [Francisella sp. TX077308]
Length = 435
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 185/312 (59%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+++ + F G G +E IK + E D + N LS Q+RN+E+
Sbjct: 43 VVLESLDFNHPEPDIKYFCGMGKMEMIK----NKRDELEADLVVFNHPLSPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECKIMDRTRLILEIFSLRAKTHEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL+++G+++
Sbjct: 256 TVGFIKNLPHDLVEAFHATLEEAIESDLLVHVIDYADEDYKSYIEQVEKVLKEIGIAD-- 313
Query: 412 LKNMIEVWNKID 423
K MI V+NKID
Sbjct: 314 -KEMICVYNKID 324
>gi|167627766|ref|YP_001678266.1| protease, GTP-binding subunit [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597767|gb|ABZ87765.1| protease, GTP-binding subunit [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 435
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 185/312 (59%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+++ + F G G +E IK + E D + N LS Q+RN+E+
Sbjct: 43 VVLESLDFNHPEPDIKYFCGMGKMEMIK----NKRDELEADLVVFNHPLSPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECKIMDRTRLILEIFSLRAKTHEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL+++G+++
Sbjct: 256 TVGFIKNLPHDLVEAFHATLEEAIESDLLVHVIDYADEDYKSYIGQVEKVLKEIGIAD-- 313
Query: 412 LKNMIEVWNKID 423
K MI V+NKID
Sbjct: 314 -KEMICVYNKID 324
>gi|167040081|ref|YP_001663066.1| small GTP-binding protein [Thermoanaerobacter sp. X514]
gi|256752602|ref|ZP_05493456.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus CCSD1]
gi|300914164|ref|ZP_07131480.1| GTP-binding proten HflX [Thermoanaerobacter sp. X561]
gi|307724600|ref|YP_003904351.1| GTP-binding proten HflX [Thermoanaerobacter sp. X513]
gi|166854321|gb|ABY92730.1| small GTP-binding protein [Thermoanaerobacter sp. X514]
gi|256748540|gb|EEU61590.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus CCSD1]
gi|300889099|gb|EFK84245.1| GTP-binding proten HflX [Thermoanaerobacter sp. X561]
gi|307581661|gb|ADN55060.1| GTP-binding proten HflX [Thermoanaerobacter sp. X513]
Length = 413
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 173/298 (58%), Gaps = 31/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K + E +D + VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELKFFVENQE----VDLVIVNDELTGTQIKNIEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A ++E LQ ELA L Y+ RLV + G RL G G
Sbjct: 114 KRAKSREGMLQVELAQLKYRLPRLVGLGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE+ R R++QR R+++ + +A+VGYTNA
Sbjct: 156 PGETKLETDRRHIKNRIKAIEKKLEEIERHRSLQRERRKKNR------IPVIAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++AL++++++ + +LFATLDP + +VLPSGR+V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTNAEVYVEDKLFATLDPTARRLVLPSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
+TLEE ADLL+HV+D T+P++EE V +VL + V I V+NKID D
Sbjct: 270 STLEEAKYADLLLHVIDVTSPDMEEKIKVVEKVLSDLDVINTP---RINVFNKIDLLD 324
>gi|404253578|ref|ZP_10957546.1| HSR1-like GTP-binding protein [Sphingomonas sp. PAMC 26621]
Length = 430
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 182/320 (56%), Gaps = 30/320 (9%)
Query: 108 LPPHV-VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
+ HV VV ++K + T G G +E + + AE+ + + +A L+ +QQR
Sbjct: 44 MAIHVEVVDRVAVKVRALQPATLIGKGQLEALAATVRMAEA----ELVVFDASLTPVQQR 99
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLE+A V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 100 NLEKALSAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE 153
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
R GG GF+ G GET+++ RR I +R + L ++E+V RTR + R R
Sbjct: 154 -----------RQRGGFGFLGGPGETQIEADRRLIRDRMARLKKELEQVSRTRGLHRDRR 202
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRK 346
+R +A+VGYTNAGKSTL + ++ +D+ ++ LFATLDP L+ + LP K
Sbjct: 203 QRAPWP------VIALVGYTNAGKSTLFNRMTGADVMAEDLLFATLDPTLRQIALPGIDK 256
Query: 347 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 406
+LSDTVGF+S+LP LV AF ATLEEVV ADLL+HV D P+ + V VL+ +G
Sbjct: 257 AILSDTVGFVSELPTLLVAAFKATLEEVVSADLLIHVRDIAHPDTIAQKDDVEAVLRDIG 316
Query: 407 VSEEKLKNMIEVWNKIDYHD 426
V + IE WNK+D D
Sbjct: 317 VDASVPR--IEAWNKLDLLD 334
>gi|326387750|ref|ZP_08209356.1| small GTP-binding protein domain-containing protein
[Novosphingobium nitrogenifigens DSM 19370]
gi|326207796|gb|EGD58607.1| small GTP-binding protein domain-containing protein
[Novosphingobium nitrogenifigens DSM 19370]
Length = 448
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 151/384 (39%), Positives = 204/384 (53%), Gaps = 58/384 (15%)
Query: 54 FNRDPDD-------PPRLFLVQPRLKPPTFL----QAKLNEALCLANSLEEQRDGYFDTD 102
F R+PDD + +V P L+ L +A+L+E LA ++ G D
Sbjct: 6 FGRNPDDLKGEVTHGAKALVVLPDLRQRGGLGVDAEARLDEGQGLARAI-----GIVVVD 60
Query: 103 FFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSG 162
F LP V R T FG G V+ K + +S EL + V+ LS
Sbjct: 61 AFI--LPIRAV-----------RPATLFGEGQVD--KIAVACEQSDAEL--VIVDGALSA 103
Query: 163 IQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRL 222
IQQRNLE + V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR
Sbjct: 104 IQQRNLEDRLKRKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SW 157
Query: 223 TFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQ 282
T E R GG GF+ G GET+++ RR I R + + ++E+VRRTR +
Sbjct: 158 THLE-----------RQRGGFGFLGGPGETQIEADRRLIRGRMARIRRELEQVRRTRGLH 206
Query: 283 RAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP 342
R R+R +A+VGYTNAGKSTL + L+ + + ++ LFATLDP ++++ LP
Sbjct: 207 RERRQRAP------WPIIALVGYTNAGKSTLFNRLTGATVMAEDLLFATLDPTMRAIRLP 260
Query: 343 SGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVL 402
K +LSDTVGFISDLP QLV AF ATLEEV AD++VHV D P + + V +L
Sbjct: 261 GVDKAILSDTVGFISDLPTQLVAAFRATLEEVTAADVIVHVRDVANPASAQQKREVEDIL 320
Query: 403 QQVGVSEEKLKN--MIEVWNKIDY 424
+GV E+ + ++E WNKID
Sbjct: 321 TDLGVIGEEGTSIPIVEAWNKIDL 344
>gi|399517194|ref|ZP_10758751.1| GTP-binding protein related to HflX [Leuconostoc
pseudomesenteroides 4882]
gi|398647902|emb|CCJ66778.1| GTP-binding protein related to HflX [Leuconostoc
pseudomesenteroides 4882]
Length = 426
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 178/311 (57%), Gaps = 45/311 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE I+ A + E+D I N L+ Q RNLE+A V+DR GLI++IF
Sbjct: 53 TYFGKGKVE----EISAAVATYEVDMIVANDELTPSQIRNLEKATNATVVDRTGLILDIF 108
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TK A+LQ +LA L Y+ +RL R + T + + G+GG GF S
Sbjct: 109 AQRAQTKVAQLQVQLARLQYQLTRL--------RTSMSITLDQQT------GAGGGGFTS 154
Query: 248 -GAGETELQLQRRRILERRSHL---LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
GAGET+L+ RRRI + H+ L+ +E+ TR+ QR L +VA+V
Sbjct: 155 RGAGETKLEQSRRRITAQMVHIRQELADLEKGETTRSAQR---------QNNDLPSVALV 205
Query: 304 GYTNAGKSTLVSAL----------SDS-DLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
GYTNAGKSTL++ L +DS +F LFATL+ ++ + LP ++ LLSDT
Sbjct: 206 GYTNAGKSTLMNRLLARFGVGANNNDSKQVFEKDMLFATLNTTVRQLTLPDKKQFLLSDT 265
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+S +P LV AF +TL+E ADLL+HV+D + P+ ++ TT Q LQ++GVS
Sbjct: 266 VGFVSKIPHNLVAAFKSTLQEAASADLLLHVVDVSDPHYQDMMTTTSQTLQEIGVSG--- 322
Query: 413 KNMIEVWNKID 423
+ I V+NK D
Sbjct: 323 RQTITVYNKAD 333
>gi|332185025|ref|ZP_08386774.1| GTP-binding protein HflX [Sphingomonas sp. S17]
gi|332014749|gb|EGI56805.1| GTP-binding protein HflX [Sphingomonas sp. S17]
Length = 430
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/317 (41%), Positives = 178/317 (56%), Gaps = 29/317 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ +L+ + T G G VE + + E++ + + L+ +QQRNLE
Sbjct: 50 VVERIALRVRSPKPATLIGSGQVEQVAQQVRMEEAQ----LVVFDGSLTPVQQRNLETTL 105
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 106 EAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE------ 153
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L ++++V RTR + R R+R
Sbjct: 154 -----RQRGGFGFLGGPGETQIEADRRMIRDRMARLRRELDQVSRTRGLHRDRRQRAP-- 206
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+A+VGYTNAGKSTL + L+ + + + LFATLDP L+ + LP K +LSDT
Sbjct: 207 ----WPIIALVGYTNAGKSTLFNRLTGAHVMAKDLLFATLDPTLRQIQLPGIDKAILSDT 262
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+SDLP QLV AF ATLEEVV ADLL+HV D P+ E R V VL ++GV E
Sbjct: 263 VGFVSDLPTQLVAAFKATLEEVVSADLLIHVRDIAHPDSEAQRADVEAVLTEIGVDPETP 322
Query: 413 KNMIEVWNKIDYHDEEM 429
+ E WNKID + E+
Sbjct: 323 R--FEAWNKIDLVEGEL 337
>gi|225872683|ref|YP_002754140.1| GTP-binding protein HflX [Acidobacterium capsulatum ATCC 51196]
gi|347602417|sp|C1F407.1|HFLX_ACIC5 RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|225792080|gb|ACO32170.1| putative GTP-binding protein HflX [Acidobacterium capsulatum ATCC
51196]
Length = 432
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 177/312 (56%), Gaps = 37/312 (11%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
+ G+A A T G G VE ++ AES D I L+ Q RNLE A V+DR
Sbjct: 60 RRGRADAATLIGSGKVEEVRAV---AESS-HADVIVFGQNLTPTQLRNLENALPGRVIDR 115
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI++IF HA T+E LQ ELA L Y RL + RGR
Sbjct: 116 TQLILDIFARHARTREGMLQVELAQLEYMLPRL---------------------TGRGRE 154
Query: 240 SG---GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRG 296
G G GET+L+ RRRI R S L ++E VRR R+ QR +
Sbjct: 155 MSRLGGGIGTRGPGETQLETDRRRIQRRISTLKGELESVRRIRSQQRQR------REAVP 208
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFI 356
+ TVA+VGYTNAGKSTL +AL+ + + + +R+FATLDP+L+++VLPS RKVLLSDTVGFI
Sbjct: 209 VPTVALVGYTNAGKSTLFNALTGAGVLASSRMFATLDPKLRAIVLPSRRKVLLSDTVGFI 268
Query: 357 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI 416
DLP L+ +F ATLEEV +A++L+HV DC++ EEHR V VL ++G + K I
Sbjct: 269 RDLPPTLISSFRATLEEVQKAEVLLHVQDCSSATREEHRAEVKHVLAELGAGD---KPQI 325
Query: 417 EVWNKIDYHDEE 428
EV NK+D E
Sbjct: 326 EVLNKVDLLSPE 337
>gi|167037414|ref|YP_001664992.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115827|ref|YP_004185986.1| GTP-binding proten HflX [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856248|gb|ABY94656.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928918|gb|ADV79603.1| GTP-binding proten HflX [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 413
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 173/298 (58%), Gaps = 31/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K + E +D + VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELKFFVENQE----VDLVIVNDELTGTQIKNIEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A ++E LQ ELA L Y+ RLV + G RL G G
Sbjct: 114 KRAKSREGMLQVELAQLKYRLPRLVGLGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE+ R R++QR R+++ + +A+VGYTNA
Sbjct: 156 PGETKLETDRRHIKNRIKAIEKKLEEIERHRSLQRERRKKNR------IPVIAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++AL++++++ + +LFATLDP + +VLPSGR+V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTNAEVYVEDKLFATLDPTARRLVLPSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
+TLEE ADLL+HV+D T+P++EE V +VL + V I V+NKID D
Sbjct: 270 STLEEAKYADLLLHVIDVTSPDMEEKIKVVEKVLSDLDVINTP---RINVFNKIDLLD 324
>gi|388454931|ref|ZP_10137226.1| GTPase [Fluoribacter dumoffii Tex-KL]
Length = 418
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 177/301 (58%), Gaps = 31/301 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I + ++ + + VN LS Q+RNLER + V+DR GLI++
Sbjct: 54 AKYYIGKGKAEEIAQLVKALDA----ELVLVNHELSPSQERNLERLFECRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR R R ARR+ L TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKYINKRLEKVRGNRDQNRQARRKAS------LLTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL +AL+ +++ +LFATLDP ++ + LP V+L+DTVGFI DLP QLV+
Sbjct: 206 TNAGKSTLFNALTGENIYVANQLFATLDPTMRQLNLPGSSSVILTDTVGFIRDLPHQLVE 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATLEE +ADLL+HV+D + P+ ++ +V QVL ++GV + +I V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPHWRDNVFSVEQVLDELGVHD---IPVILVFNKIDLK 322
Query: 426 D 426
+
Sbjct: 323 E 323
>gi|334344357|ref|YP_004552909.1| GTP-binding proten HflX [Sphingobium chlorophenolicum L-1]
gi|334100979|gb|AEG48403.1| GTP-binding proten HflX [Sphingobium chlorophenolicum L-1]
Length = 443
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/308 (41%), Positives = 177/308 (57%), Gaps = 36/308 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I E+ + + V+ LS +QQ NLE+A V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLARMEEA----ELVIVDNALSPVQQSNLEKATETKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V +TR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTKTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + ++ +D+ ++ LFATLDP ++ + LP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRMTGADVMAEDLLFATLDPTMRQIALPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN---------MIEV 418
ATLEEV+ ADL+VHV D P+ + R V+ VL ++GV+ E +IE
Sbjct: 279 RATLEEVLSADLIVHVRDIAHPDSDAQRDDVIDVLSELGVAGEGALEAGEGNDPPPIIEA 338
Query: 419 WNKIDYHD 426
WNK+D D
Sbjct: 339 WNKLDLLD 346
>gi|54295993|ref|YP_122362.1| hypothetical protein lpp0010 [Legionella pneumophila str. Paris]
gi|53749778|emb|CAH11158.1| hypothetical protein lpp0010 [Legionella pneumophila str. Paris]
Length = 414
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 177/311 (56%), Gaps = 31/311 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ + +LFATLDP ++ + LP +L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATLEE +ADLL+HV+D + PN E V +VL ++ VS +I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVSN---IPVIQVFNKIDLQ 322
Query: 426 DEEMGDVEYID 436
+ ++Y +
Sbjct: 323 EGWQPKIDYTE 333
>gi|392960682|ref|ZP_10326147.1| GTP-binding protein, HflX [Pelosinus fermentans DSM 17108]
gi|421054560|ref|ZP_15517528.1| GTP-binding proten HflX [Pelosinus fermentans B4]
gi|421059271|ref|ZP_15521882.1| GTP-binding protein, HflX [Pelosinus fermentans B3]
gi|421068476|ref|ZP_15529776.1| GTP-binding protein, HflX [Pelosinus fermentans A12]
gi|421071423|ref|ZP_15532542.1| GTP-binding proten HflX [Pelosinus fermentans A11]
gi|392440918|gb|EIW18578.1| GTP-binding proten HflX [Pelosinus fermentans B4]
gi|392442147|gb|EIW19738.1| GTP-binding protein, HflX [Pelosinus fermentans A12]
gi|392447097|gb|EIW24357.1| GTP-binding proten HflX [Pelosinus fermentans A11]
gi|392454579|gb|EIW31401.1| GTP-binding protein, HflX [Pelosinus fermentans DSM 17108]
gi|392459218|gb|EIW35649.1| GTP-binding protein, HflX [Pelosinus fermentans B3]
Length = 599
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 171/305 (56%), Gaps = 51/305 (16%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V+ I + ++ I + LS QQRNLE+A G VLDR LI++IF
Sbjct: 235 FIGRGKVQEISL----LRQEKNVNLIIFDDELSPAQQRNLEKALGIKVLDRTALILDIFA 290
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI-- 246
A + E KLQ ELA L Y RL GG+G +
Sbjct: 291 QRARSHEGKLQVELAQLRYNLPRL----------------------------GGQGLVLS 322
Query: 247 --------SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
G GET+L++ RRRI ER S + QIE +++ R + R R + +
Sbjct: 323 RLGGGIGTRGPGETKLEVDRRRIRERVSDITKQIEYIKKQRNLHRKRR------ETTRIP 376
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
T+A+VGYTNAGKSTL++ L+ S++ ++ +LFATLDP +++ L +G++ L++DTVGFI
Sbjct: 377 TIALVGYTNAGKSTLLNLLTASEVLAEDKLFATLDPTTRNITLTNGQQALITDTVGFIQK 436
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP QL+ AF ATLEEVV+AD+L+HV+D + P +E V QVL ++ V +K +I +
Sbjct: 437 LPHQLIAAFRATLEEVVQADILLHVVDVSHPQYQEQSHAVFQVLHELNVD---IKQLITI 493
Query: 419 WNKID 423
+NK D
Sbjct: 494 FNKAD 498
>gi|164687577|ref|ZP_02211605.1| hypothetical protein CLOBAR_01218 [Clostridium bartlettii DSM
16795]
gi|164603351|gb|EDQ96816.1| GTP-binding protein HflX [Clostridium bartlettii DSM 16795]
Length = 428
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 175/321 (54%), Gaps = 47/321 (14%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLER 170
V+QN + A F G G VE I+ CH+ GA I N LSG RN+E
Sbjct: 50 VIQNKPARD----AAYFIGKGKVEEIRDYCHMLGA------TMIVFNDELSGAHMRNIED 99
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
G V+DR LI++IF A +KE KLQ ELA L Y RL R+ G G++
Sbjct: 100 VTGLKVIDRTALILDIFAQRALSKEGKLQVELAQLKY---RLPRLYGMGGQM-------- 148
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
S G G G RG GE +L++ +R IL R + + ++ EV++ R QR R +
Sbjct: 149 ---SRTGAGIGTRG----PGEQKLEVDKRHILNRAADIRKELREVKQNRETQRVQRLKSN 201
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLP 342
+ VA+VGYTNAGKSTL++ L ++ ++F LFATLD L+ LP
Sbjct: 202 ------IPIVALVGYTNAGKSTLLNELIKTHKDYETEKEVFVKDMLFATLDVTLRKATLP 255
Query: 343 SGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVL 402
+ R L+ DTVGF+S LP LV+AF ATLEEV ADL++HV+D T + E + T VL
Sbjct: 256 NKRDFLVVDTVGFVSKLPHDLVEAFKATLEEVKYADLILHVIDATNSSFELQKQTTESVL 315
Query: 403 QQVGVSEEKLKNMIEVWNKID 423
+++G ++K I V+NKID
Sbjct: 316 KELGADDKK---TIIVYNKID 333
>gi|163795484|ref|ZP_02189450.1| putative gtp-binding protein [alpha proteobacterium BAL199]
gi|159179083|gb|EDP63616.1| putative gtp-binding protein [alpha proteobacterium BAL199]
Length = 437
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 178/302 (58%), Gaps = 28/302 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K R + G G +E I + E ++ + V+ L+ +QQRNLE+ V+DR L
Sbjct: 54 KPRPGSLLGGGQIERIAQLVEALE----IEVVVVDRPLTPVQQRNLEKELDAKVIDRTQL 109
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A A T E +L +LA+L +++SRLVR T E R GG
Sbjct: 110 ILEIFGARARTHEGRLHVDLASLTFQRSRLVR------SWTHLE-----------RQRGG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
GF+ G GE +L++ RR I ++ + ++EEV+RTR + R ARRR VA+
Sbjct: 153 GGFMGGPGERQLEIDRRLIDDKIIRIRRELEEVKRTRELHRGARRRVP------YPIVAL 206
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + LS + + ++ LFATLDP ++ + +P GR ++LSDTVGFISDLP
Sbjct: 207 VGYTNAGKSTLFNRLSGASVVAEDLLFATLDPTMRRIEVPGGRTIILSDTVGFISDLPTH 266
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNK 421
LV AF ATLEEV EAD++VHV D P+ ++ V VL +G+ E + M+EV NK
Sbjct: 267 LVAAFRATLEEVTEADVVVHVRDIAHPDSNAQKSDVEGVLASLGIDETTRSGRMLEVLNK 326
Query: 422 ID 423
ID
Sbjct: 327 ID 328
>gi|390347169|ref|XP_798244.3| PREDICTED: putative GTP-binding protein 6-like [Strongylocentrotus
purpuratus]
Length = 536
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 176/297 (59%), Gaps = 28/297 (9%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
FG GT E + I S+ ++ ++F+N LSG+Q++ +E WG PV DR ++++IF
Sbjct: 164 MFGQGTFEELTAQIR---SQPDITSVFLNVDRLSGVQKKTMEEEWGLPVYDRYEVVLQIF 220
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
HA +KEAKLQ LA L +++S L + ET + + + SG + +I
Sbjct: 221 KEHASSKEAKLQIALAELHFRRSHLHQ-----------ETFDLD------QQSGAQQYIG 263
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET L+ ++R++ ++ L +E+++ RA+ R R R + VAVVGYTN
Sbjct: 264 GGGETLLEKKQRQLRDKEGALRKALEKLKGKRALLRKGRER------KHFPHVAVVGYTN 317
Query: 308 AGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
AGK++L+ A++ D+ L +LFATLD + L + V+ DTVGFIS LP QL+ +
Sbjct: 318 AGKTSLIKAMTGDTRLEPRNQLFATLDVTSHAGYLSNRMPVIYIDTVGFISQLPHQLIAS 377
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
F ATLE+V+ ADLLVHV D + P E + V+ VL +GV++ L NMIEV NKID
Sbjct: 378 FAATLEDVLCADLLVHVRDVSHPESENQKIQVISVLHDLGVNQHLLDNMIEVNNKID 434
>gi|397665638|ref|YP_006507175.1| putative GTPase [Legionella pneumophila subsp. pneumophila]
gi|395129049|emb|CCD07271.1| putative GTPase [Legionella pneumophila subsp. pneumophila]
Length = 414
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 177/311 (56%), Gaps = 31/311 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ + +LFATLDP ++ + LP +L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATLEE +ADLL+HV+D + PN E V +VL ++ VS +I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVSN---IPVIQVFNKIDLQ 322
Query: 426 DEEMGDVEYID 436
+ ++Y +
Sbjct: 323 EGWQPKIDYTE 333
>gi|334143608|ref|YP_004536764.1| GTP-binding proten HflX [Thioalkalimicrobium cyclicum ALM1]
gi|333964519|gb|AEG31285.1| GTP-binding proten HflX [Thioalkalimicrobium cyclicum ALM1]
Length = 436
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/311 (41%), Positives = 184/311 (59%), Gaps = 33/311 (10%)
Query: 115 QNPSLKSGKARADT--FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
Q +K+ + R D + G G ++ + A + + D + N LS Q+RN+ER
Sbjct: 45 QAELIKTKRDRPDAKLYIGSGKLD----EVAAAVALHKADVVIFNHALSPGQERNIERVV 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DRVGLI++IF A + E KLQ ELA L + +RLVR G T
Sbjct: 101 KARVIDRVGLILDIFAQRARSHEGKLQVELAQLRHMSTRLVR----------GWTHLE-- 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GET+L+ +R + ER HLL +I++VR+ RA+ R +R+R S
Sbjct: 149 -----RQKGGIG-LRGPGETQLESDKRLLQERIKHLLKRIDKVRKQRALGRQSRQR---S 199
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
D T+ +VGYTNAGKSTL + L+ +D++++ RLFATLD L+SV LP G K +L+DT
Sbjct: 200 DH---PTITLVGYTNAGKSTLFNLLTAADVYAENRLFATLDATLRSVHLPGGGKAILADT 256
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI +P LV AF +TLEE EADLL+H++D P ++ V QV+ +VG ++ +
Sbjct: 257 VGFIRHIPHDLVTAFRSTLEETSEADLLIHLVDAADPLRDDKIAQVEQVINEVGAAD--V 314
Query: 413 KNMIEVWNKID 423
+I V+NKID
Sbjct: 315 PQLI-VFNKID 324
>gi|358062786|ref|ZP_09149425.1| GTP-binding protein HflX [Clostridium hathewayi WAL-18680]
gi|356699001|gb|EHI60522.1| GTP-binding protein HflX [Clostridium hathewayi WAL-18680]
Length = 417
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 178/303 (58%), Gaps = 35/303 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G +E +K E ELDA + + LS Q RNLE+A V+DR +I++
Sbjct: 60 TYLGKGKIEEVK------ERIWELDATGVVCDDELSPAQLRNLEQALDTKVMDRTMVILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A+T E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 114 IFASRANTSEGKIQVELAQLKYRAARLVGLRSSLSRLGGGIGTRG--------------- 158
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +L++ RR I ER L +++ +V R R V R R ++ + A+VGY
Sbjct: 159 ---PGEKKLEMDRRLIHERIGQLKAELRDVERHRDVMRQQRSKNHTT------VAAIVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL++ L+D+ + ++ +LFATLDP +++ LPSG+++LL+DTVGFI LP L++
Sbjct: 210 TNAGKSTLLNLLTDAGILAEDKLFATLDPTTRNLELPSGQQILLTDTVGFIRKLPHHLIE 269
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF +TLEE +D+++HV+DC+ P ++ TV + L+Q+ V+ K M+ ++NKID
Sbjct: 270 AFKSTLEEARYSDIILHVVDCSNPQMDMQMYTVYETLKQLEVTG---KIMVTIYNKIDKI 326
Query: 426 DEE 428
+EE
Sbjct: 327 EEE 329
>gi|148358150|ref|YP_001249357.1| GTP binding protein HflX [Legionella pneumophila str. Corby]
gi|296105508|ref|YP_003617208.1| GTPase [Legionella pneumophila 2300/99 Alcoy]
gi|148279923|gb|ABQ54011.1| GTP binding protein HflX [Legionella pneumophila str. Corby]
gi|295647409|gb|ADG23256.1| GTPase [Legionella pneumophila 2300/99 Alcoy]
Length = 414
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 177/311 (56%), Gaps = 31/311 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ + +LFATLDP ++ + LP +L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATLEE +ADLL+HV+D + PN E V +VL ++ VS +I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVSN---IPVIQVFNKIDLQ 322
Query: 426 DEEMGDVEYID 436
+ ++Y +
Sbjct: 323 EGWQPKIDYTE 333
>gi|158320815|ref|YP_001513322.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs]
gi|158141014|gb|ABW19326.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs]
Length = 429
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 167/303 (55%), Gaps = 39/303 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE IK E+ + + N LSG Q RNLE G V+DR LI++IF
Sbjct: 64 FIGKGKVEEIKELCENLEA----NMVIFNDELSGSQIRNLEEEIGVDVIDRTALILDIFA 119
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A TKE KLQ ELA L Y+ RL+ G +S +G G G RG
Sbjct: 120 QRASTKEGKLQVELAQLKYRMPRLI--------------GLGRQLSQQGAGIGTRG---- 161
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE +L+ RR IL+R + S+++EVR+ R VQR R + + VA+VGYTNA
Sbjct: 162 PGEKKLETDRRHILKRIDDIESELKEVRKNREVQRGKRSK------SEIPIVALVGYTNA 215
Query: 309 GKSTLVSAL---SD-----SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
GKSTL++ L SD +++ + LFATLD L+ + P +L+DTVGF+S LP
Sbjct: 216 GKSTLMNTLLKLSDHHDDTKEVYVEDMLFATLDVSLRRLSFPDKLDFILTDTVGFVSKLP 275
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV+AF ATLEEV ADLL+HV+D + + T L VL +GV KN+I V+N
Sbjct: 276 HALVNAFKATLEEVKYADLLIHVIDASNEEYNLQKDTTLGVLNDLGVEN---KNIITVYN 332
Query: 421 KID 423
KID
Sbjct: 333 KID 335
>gi|387824411|ref|YP_005823882.1| GTP-binding protein HflX [Francisella cf. novicida 3523]
gi|328676010|gb|AEB28685.1| GTP-binding protein HflX [Francisella cf. novicida 3523]
Length = 435
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 183/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLVR G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVR----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|256848283|ref|ZP_05553726.1| GTP-binding protein HflX [Lactobacillus coleohominis 101-4-CHN]
gi|256714881|gb|EEU29859.1| GTP-binding protein HflX [Lactobacillus coleohominis 101-4-CHN]
Length = 425
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 207/388 (53%), Gaps = 50/388 (12%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G ++ IK +I AE E + N LS Q NL G V+DR LI+E
Sbjct: 54 AATYFGSGKIDEIK-NIAAAE---EATTVITNDELSPSQLSNLNDEVGVRVIDRTALILE 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A TKEAK+Q ++A L Y+ RL + RL +TG GG GF
Sbjct: 110 IFAKRAQTKEAKIQVQIAKLEYQLPRLHT--AANQRLD-QQTG------------GGAGF 154
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ GAGET++++ RR I + SHL +++E+ ++ A +RA R D + T A+VG
Sbjct: 155 ANRGAGETKIEMDRRVIQKHISHLRHELKEINKSEATKRALR------DKSAIPTAALVG 208
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTNAGKSTL++ + + ++F LF+TLD ++ + LP ++ +LSDTVGF+S
Sbjct: 209 YTNAGKSTLMNKMIERYGISREKEVFEKDMLFSTLDTSVRQLTLPDQKRFILSDTVGFVS 268
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP L++AF +TL E +ADLL+ ++D + P+ +E T + L Q+G+ MI
Sbjct: 269 KLPTHLIEAFKSTLTEAAKADLLIQIIDYSDPHRDEMIKTTEKTLHQIGIDNIP---MIY 325
Query: 418 VWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN------ 471
V+NK D + E +E GDD S +DK S + ++ I ++ DD +
Sbjct: 326 VFNKADKTNFEYPTME---GDDHLVISAKDDK---SLDLFIKTIKDHLFDDYVDAKLLIP 379
Query: 472 -NDGFVSEDLGESMNKNHNDY-SDGWLL 497
DG V L E N DY +DG LL
Sbjct: 380 FTDGHVVSYLNEHANITDTDYQNDGTLL 407
>gi|387886915|ref|YP_006317214.1| protease, GTP-binding subunit [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386871731|gb|AFJ43738.1| protease, GTP-binding subunit [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 435
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 183/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+++ + F G G +E IK + E D + N LS Q+RN+E+
Sbjct: 43 VVLESLDFNHPEPDIKYFCGMGKMEMIK----NKRDELEADLVVFNHPLSPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECKIMDRTRLILEIFSLRAKTHEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++ +D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITKADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL+++G+ +
Sbjct: 256 TVGFIKNLPHDLVEAFHATLEEAIESDLLVHVIDYADEDYKSYIEQVEKVLKEIGIVD-- 313
Query: 412 LKNMIEVWNKID 423
K MI V+NKID
Sbjct: 314 -KEMICVYNKID 324
>gi|164687689|ref|ZP_02211717.1| hypothetical protein CLOBAR_01331 [Clostridium bartlettii DSM
16795]
gi|164603463|gb|EDQ96928.1| GTP-binding protein HflX [Clostridium bartlettii DSM 16795]
Length = 416
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 180/321 (56%), Gaps = 38/321 (11%)
Query: 121 SGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
S K + + G G ++ +K + + D + N LS Q +N+E V+DR
Sbjct: 46 SKKVNSTFYMGSGKIDELKNLV----EENNADIVIFNNELSASQVKNIEEEINCNVIDRT 101
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
LI++IF A T+E+KLQ E+A L Y+ RLV G + L GR S
Sbjct: 102 ALILDIFANRAKTRESKLQVEVAKLQYELPRLV---GSNEDL--------------GRQS 144
Query: 241 GGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG G + GAGET+L+L RRRI ++ ++L ++E ++ R VQ++ R++ +
Sbjct: 145 GGVGTKNRGAGETKLELDRRRIEDKIANLNKELEVLKNQREVQKSKRKKSN------IPN 198
Query: 300 VAVVGYTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
VA+VGYTNAGKS++++AL D +F LFATL+ ++++ L + + LLSDT
Sbjct: 199 VALVGYTNAGKSSVMNALVEKFINDEDKKVFEKNMLFATLETYVRNIKLDNNKSFLLSDT 258
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+ DLP LV AF +TLEEV +ADLL+HV+D + PN E H + L Q+G +
Sbjct: 259 VGFVGDLPHSLVKAFRSTLEEVCDADLLLHVIDISNPNYENHINVTNETLNQIGADNIPV 318
Query: 413 KNMIEVWNKIDYHDEEMGDVE 433
I V+NK+D + + ++E
Sbjct: 319 ---IYVYNKVDLMELDTFNIE 336
>gi|114327788|ref|YP_744945.1| GTP-binding protein HflX [Granulibacter bethesdensis CGDNIH1]
gi|114315962|gb|ABI62022.1| GTP-binding protein hflX [Granulibacter bethesdensis CGDNIH1]
Length = 460
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/330 (43%), Positives = 192/330 (58%), Gaps = 39/330 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFVNAILSGIQQRNLER 170
VVV + L R T G G V+ + G G+ + + V+A L+ +QQRNLER
Sbjct: 64 VVVHSGVLPLRARRPSTLLGEGQVQ-----LTGQALAGQNITVVIVDAALTPVQQRNLER 118
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
AW V+DR GLI++IF A T+E LQ ELA L Y++SRLVR T E
Sbjct: 119 AWNTKVIDRTGLILDIFGERAATREGTLQVELAHLEYQRSRLVR------SWTHLE---- 168
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + R AR+R
Sbjct: 169 -------RQRGGFGFLGGPGETQIEADRRLITDRIVKLKRELEQVRRTRGLHRTARQR-- 219
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
VA+VGYTNAGKSTL +A++ S + + +LFATLDP ++ + L SGR+V+LS
Sbjct: 220 ----VPFPVVALVGYTNAGKSTLFNAMTGSTVLAKDQLFATLDPTMRGLRLRSGRRVILS 275
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGFIS+LP +L+ AF ATLEEV EAD+++HV D + P+ R V VL + V +
Sbjct: 276 DTVGFISELPTELIAAFRATLEEVAEADVILHVRDVSHPDTAAQRHDVQLVLDGM-VRDH 334
Query: 411 KL-----KNMIEVWNKIDYHDEEMGDVEYI 435
L MIEV NK D +G VE++
Sbjct: 335 DLDADWRGRMIEVLNKADL----LGGVEHV 360
>gi|116620284|ref|YP_822440.1| HSR1-like GTP-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223446|gb|ABJ82155.1| GTP-binding protein, HSR1-related [Candidatus Solibacter usitatus
Ellin6076]
Length = 394
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 169/302 (55%), Gaps = 41/302 (13%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T G G VE + + E+ D + + LS QQRNLE+A V+DR LI++
Sbjct: 9 AATLIGQGKVEELAASVLSTEA----DVVIFDQDLSPTQQRNLEKALATKVIDRTQLILD 64
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A T+E +LQ ELA L Y RL GRG
Sbjct: 65 IFASRARTREGRLQVELAQLNYLLPRLA-----------------------GRGVQMSRL 101
Query: 246 ISGAG-----ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
G G ET+L+ RRRI +R + ++E VR RA+ R RRR LAT+
Sbjct: 102 GGGIGTRGPGETQLETDRRRIAKRIKKVEDELEGVRAGRALHR--RRRSAVP----LATL 155
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
A+ GYTNAGKSTL + L+ + + +D+++FATLDP ++ +VLPS R+VL+SDTVGFI +LP
Sbjct: 156 ALAGYTNAGKSTLFNRLTRASVLADSKMFATLDPTVRPLVLPSRRRVLMSDTVGFIRNLP 215
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF ATLEEV EA L++HV+D ++P EH VL+VL ++G E I V N
Sbjct: 216 TTLVKAFRATLEEVNEAALILHVVDASSPTAPEHTAHVLKVLAEIGAHEVP---QILVLN 272
Query: 421 KI 422
K+
Sbjct: 273 KV 274
>gi|213513263|ref|NP_001133555.1| GTP-binding protein 6 [Salmo salar]
gi|209154476|gb|ACI33470.1| GTP-binding protein 6 [Salmo salar]
Length = 565
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 191/366 (52%), Gaps = 39/366 (10%)
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
R+F+V P +K + L AN + E+ G +T L V+ L +
Sbjct: 141 RIFIVHPDVK-----WGSRKQYLTTANLMMEEAVGLVNT------LQNWSVIDKVILSTK 189
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERAWGKPVLDRVG 181
FG G +T+ I + A+FVN LS ++ E AWG V DR
Sbjct: 190 TPEKKMIFGKGNFQTLTERIRRTPG---ITAVFVNVERLSPASEKEFEEAWGVKVFDRYS 246
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
+++ IF +A TKEAKLQ LA + +SRL EV + +G G
Sbjct: 247 VVLHIFRCNARTKEAKLQVSLAEIPLLRSRL----------------RNEVANLDQQGGG 290
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
R +I G+GET +++Q+R + ER+ + S +E +RR R + R+ R+ R ++
Sbjct: 291 SR-YIMGSGETLMEVQQRVLQERKLKICSALEHLRRKRHLLRSQRKH------RDFPIIS 343
Query: 302 VVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
V+GYTN GK+TL+ AL+ D+ L +LFATLD + + LPS VL DT+GF+S LP
Sbjct: 344 VMGYTNCGKTTLIKALTGDAALQPRDQLFATLDVTVHAGTLPSHMSVLYVDTIGFLSQLP 403
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
QL+D+F ATLE+V +DL+VHV D + P + VL VL+ + + + L +++EV N
Sbjct: 404 HQLIDSFSATLEDVTHSDLIVHVRDISHPETVNQKENVLNVLRNLQIPDRLLSSIVEVHN 463
Query: 421 KIDYHD 426
KID D
Sbjct: 464 KIDLVD 469
>gi|269926513|ref|YP_003323136.1| GTP-binding proten HflX [Thermobaculum terrenum ATCC BAA-798]
gi|269790173|gb|ACZ42314.1| GTP-binding proten HflX [Thermobaculum terrenum ATCC BAA-798]
Length = 441
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 169/296 (57%), Gaps = 30/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G + + N + + + LS Q+RNLE ++DR LI++IF
Sbjct: 70 TFIGKGKLRELADMKNATGAT----VVLFDDELSPSQERNLEDELKCKIIDRSALILDIF 125
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKE +LQ ELA L Y+ RL R+ R +G GG G +
Sbjct: 126 ARRARTKEGRLQVELAQLEYRLPRLTRMWTHLSR----------------QGVGGVG-LR 168
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L++ RR+ ER +H+ +IE+VR+ R + R R+ GL V++VGYTN
Sbjct: 169 GPGETQLEVDRRQSRERITHIKREIEQVRKHRKILREHRK------AEGLPVVSLVGYTN 222
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL++ L+ +D+ ++ +LFATLDP + V LP+G L +DTVGFI LP LV AF
Sbjct: 223 AGKSTLLNKLAGADVLAEDKLFATLDPTTRQVRLPAGMLSLWTDTVGFIQKLPTDLVAAF 282
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEE++EAD+LVHV+D T N EE TV + L+ +G ++ K + NK+D
Sbjct: 283 RATLEEILEADVLVHVVDITHENAEEQAATVNETLRSLGAAD---KPTVVALNKVD 335
>gi|20807587|ref|NP_622758.1| GTPase [Thermoanaerobacter tengcongensis MB4]
gi|81481813|sp|Q8RAS5.1|HFLX_THETN RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|20516126|gb|AAM24362.1| GTPases [Thermoanaerobacter tengcongensis MB4]
Length = 428
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 174/295 (58%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K + ++ D + VN L+G Q +NLE A G ++DR LI++IF
Sbjct: 73 YIGKGKLEELKMFVENQQA----DLVIVNDELTGTQIKNLEDALGVKIVDRTNLILDIFA 128
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE LQ ELA L Y+ RLV + G RL G
Sbjct: 129 KRARSKEGMLQVELAQLKYRLPRLVGLGGQLSRLGGGIGTRG------------------ 170
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I R + ++EE+ + R +QR R+++ + VA+VGYTNA
Sbjct: 171 PGETKLEVDRRHIRNRIKAIEEKLEELEKHRNLQRQRRKKNQ------IPVVAIVGYTNA 224
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++AL+ +D + + +LFATLDP + +VLPSGR+V+L+DTVGFI LP LV+AF
Sbjct: 225 GKSTLLNALTGADAYVEDKLFATLDPTARKLVLPSGREVILTDTVGFIRKLPHDLVEAFK 284
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TLEEV ADLL+HV+D T+P+++E V +VL +G E I V+NKID
Sbjct: 285 STLEEVKYADLLLHVIDVTSPDMDEKIKVVEKVLSDLGAIETP---RINVYNKID 336
>gi|421076028|ref|ZP_15537030.1| GTP-binding protein, HflX [Pelosinus fermentans JBW45]
gi|392525887|gb|EIW49011.1| GTP-binding protein, HflX [Pelosinus fermentans JBW45]
Length = 599
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 51/305 (16%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V+ I + + I + LS QQRNLE+A G VLDR LI++IF
Sbjct: 235 FIGRGKVQEISL----LRQEKNANLIIFDDELSPAQQRNLEKALGIKVLDRTALILDIFA 290
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI-- 246
A + E KLQ ELA L Y RL GG+G +
Sbjct: 291 QRARSHEGKLQVELAQLRYNLPRL----------------------------GGQGLVLS 322
Query: 247 --------SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
G GET+L++ RRRI ER + + QIE +++ R + R R + +
Sbjct: 323 RLGGGIGTRGPGETKLEVDRRRIRERVNDITRQIEYIKKQRNLHRKRR------ETTRIP 376
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
T+A+VGYTNAGKSTL++ L+ S++ ++ +LFATLDP +++ L +G++ L++DTVGFI
Sbjct: 377 TIALVGYTNAGKSTLLNLLTASEVLAEDKLFATLDPTTRNITLANGQQALITDTVGFIQK 436
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP QL+ AF ATLEEVV+AD+L+HV+D + P +E V QVL ++ V +K +I +
Sbjct: 437 LPHQLIAAFRATLEEVVQADILLHVVDVSHPQYQEQSHAVFQVLHELNVD---IKQLITI 493
Query: 419 WNKID 423
+NK+D
Sbjct: 494 FNKVD 498
>gi|397662567|ref|YP_006504105.1| putative GTPase [Legionella pneumophila subsp. pneumophila]
gi|395125978|emb|CCD04153.1| putative GTPase [Legionella pneumophila subsp. pneumophila]
Length = 414
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 179/313 (57%), Gaps = 35/313 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ + +LFATLDP ++ + LP +L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEVWNKID 423
AF ATLEE +ADLL+HV+D + PN E TV +V Q + E K+ N+ I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPNWRE---TVFEV--QKVLDELKVNNIPVIQVFNKID 320
Query: 424 YHDEEMGDVEYID 436
+ ++Y +
Sbjct: 321 LQEGWQPKIDYTE 333
>gi|210623584|ref|ZP_03293910.1| hypothetical protein CLOHIR_01860 [Clostridium hiranonis DSM 13275]
gi|210153454|gb|EEA84460.1| hypothetical protein CLOHIR_01860 [Clostridium hiranonis DSM 13275]
Length = 436
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 189/357 (52%), Gaps = 51/357 (14%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A + G G VE IK + G LDA I N LSG Q RN+E G +DR LI
Sbjct: 67 AAYYIGKGKVEEIKGYCEG------LDATLIIFNDELSGAQTRNIEDLTGIKTIDRTTLI 120
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A +KE KLQ ELA L Y RL R+ G G + S G G G R
Sbjct: 121 LDIFAQRAKSKEGKLQVELAQLKY---RLPRLYGMGGAM-----------SRTGAGIGTR 166
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G GE +L++ +R IL R + + ++++ V++ R QR R++ + VA+V
Sbjct: 167 G----PGEQKLEIDKRHILNRAADIRAELKLVKKNRETQRNQRKKSN------IPIVALV 216
Query: 304 GYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
GYTNAGKSTL++ L S+ ++F LFATLD L+ VLP+ R L+ DTVGF
Sbjct: 217 GYTNAGKSTLLNELIKTHKEYESEKEVFVKDMLFATLDVTLRKAVLPNKRDFLVVDTVGF 276
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
+S LP LVDAF +TLEEV ADL++HV+D T + E + T +VL+++G ++K
Sbjct: 277 VSKLPHDLVDAFKSTLEEVNYADLILHVIDATNDSYEIQKKTTEKVLKELGADDKK---T 333
Query: 416 IEVWNKI-----DYHDEEMGDVEYID---GDDISNFSRAEDKDTTSEPVDVECIDNY 464
I V+NK+ D + + DV YI G ++ +K DVE + Y
Sbjct: 334 ILVYNKVDKLELDIYPKNQDDVVYISAKQGINMDKLLNMIEKAVMENTYDVELLIPY 390
>gi|54292974|ref|YP_125389.1| hypothetical protein lpl0010 [Legionella pneumophila str. Lens]
gi|53752806|emb|CAH14240.1| hypothetical protein lpl0010 [Legionella pneumophila str. Lens]
Length = 414
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 179/313 (57%), Gaps = 35/313 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ + +LFATLDP ++ + LP +L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEVWNKID 423
AF ATLEE +ADLL+HV+D + PN E TV +V Q + E K+ N+ I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPNWRE---TVFEV--QKVLDELKVNNIPVIQVFNKID 320
Query: 424 YHDEEMGDVEYID 436
+ ++Y +
Sbjct: 321 LQEGWQPKIDYTE 333
>gi|381152753|ref|ZP_09864622.1| GTP-binding protein HflX [Methylomicrobium album BG8]
gi|380884725|gb|EIC30602.1| GTP-binding protein HflX [Methylomicrobium album BG8]
Length = 422
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 188/330 (56%), Gaps = 34/330 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V+ IK I + D + N L+ Q+RNLE A G V+DR GLI++IF
Sbjct: 55 FVGSGKVDEIKQAIADHVA----DIVLFNHPLTPSQERNLESALGVRVVDRNGLILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 111 QRAQTFEGKLQVELAQLKHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 152
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I +R + S++E+V + R R RR+ + TV++VGYTNA
Sbjct: 153 PGETQLETDRRLIGDRIKQIQSRLEKVEKQRHQSRGKRRK------AEIPTVSLVGYTNA 206
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ +++++ +LFATLDP L++ LP+ ++L+DTVGFI LP +LV AF
Sbjct: 207 GKSTLFNRLTGANIYAADQLFATLDPTLRNCRLPNNSAIVLADTVGFIRHLPHELVAAFK 266
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
+TL+E EADLL+HV+D A + +E T V QVL+++G +K++ + E++NKID D
Sbjct: 267 STLQEASEADLLLHVIDAHAEDRDETITQVNQVLKEIGA--DKIRQL-EIYNKIDLLD-- 321
Query: 429 MGDVEYIDGDDISNFSRAEDKDTTSEPVDV 458
G ID D+ R TT E D+
Sbjct: 322 -GGRPRIDRDETGRPVRVWLSATTGEGADL 350
>gi|403354527|gb|EJY76820.1| Small GTP-binding protein domain containing protein [Oxytricha
trifallax]
Length = 730
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 170/281 (60%), Gaps = 26/281 (9%)
Query: 160 LSGIQQRNLERAWGKP--VLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRG 217
+S ++Q N ++ + V+DR G+I++IF A T+ A+LQ ELA L Y K+ LVR
Sbjct: 316 MSELEQNNQDKNQNRNIRVIDRFGIILQIFAQRAKTRTAQLQIELAWLSYAKTMLVRGGA 375
Query: 218 PDGRLTFGETG-------------EAEVVSARGRGSGGRGFISGAGETELQLQRRRILER 264
P TFG+ G E E+ SA+GR SG G + G GET+L+++RRR+ +R
Sbjct: 376 P----TFGQLGNIFSGNMMRRDIAEMEIKSAKGRKSGASGTMGGEGETQLEIERRRLGDR 431
Query: 265 RSHLLSQIEEV-RRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
+ +L ++ ++ ++T+ + R H L + ++GYTNAGK+ L++ ++ S L
Sbjct: 432 EAKILKELGDLDKKTQNEKLKKERSHNT-----LPLIGLIGYTNAGKTALMNLVTGSKLE 486
Query: 324 SDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 383
S LF TL+ K +G+ L+ DT+GFI++LP L+++F +TLEE+ AD+LVHV
Sbjct: 487 SQDLLFQTLNTTNKRFRFENGQNALMLDTIGFITNLPHGLIESFKSTLEEIHFADILVHV 546
Query: 384 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN-MIEVWNKID 423
D + P R TVL+VL+++GV EE L+ +EVWNKID
Sbjct: 547 RDISHPYSNYQRDTVLRVLKEIGVDEETLRTKYVEVWNKID 587
>gi|52840266|ref|YP_094065.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|378775971|ref|YP_005184397.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila
ATCC 43290]
gi|52627377|gb|AAU26118.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|364506774|gb|AEW50298.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila
ATCC 43290]
Length = 419
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 179/313 (57%), Gaps = 35/313 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 59 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 114
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 115 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 156
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 157 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 210
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ + +LFATLDP ++ + LP +L+DTVGFI DLP LV+
Sbjct: 211 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 270
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEVWNKID 423
AF ATLEE +ADLL+HV+D + PN E TV +V Q + E K+ N+ I+V+NKID
Sbjct: 271 AFRATLEETQQADLLLHVIDISDPNWRE---TVFEV--QKVLDELKVNNIPVIQVFNKID 325
Query: 424 YHDEEMGDVEYID 436
+ ++Y +
Sbjct: 326 LQEGWQPKIDYTE 338
>gi|374260547|ref|ZP_09619144.1| GTP binding protein HflX [Legionella drancourtii LLAP12]
gi|363539128|gb|EHL32525.1| GTP binding protein HflX [Legionella drancourtii LLAP12]
Length = 418
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/309 (40%), Positives = 179/309 (57%), Gaps = 31/309 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I + ++ + + VN LS Q+RNLER V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAQLVKALDA----ELVLVNHELSPSQERNLERLLECRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKYINRRLEKVRCSRDQNRQARRKAA------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL +AL+ ++ +LFATLDP ++ + LP V+L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNALTGERIYVANQLFATLDPTMRQLSLPGASGVILADTVGFIRDLPHHLVE 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATLEE +ADLL+HV+D + P+ + +V QVL ++GV++ +I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPHWRDTVFSVQQVLDELGVND---IPVIQVFNKIDLQ 322
Query: 426 DEEMGDVEY 434
+ ++Y
Sbjct: 323 EGWEAKIDY 331
>gi|302141655|emb|CBI18834.3| unnamed protein product [Vitis vinifera]
Length = 212
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/226 (53%), Positives = 147/226 (65%), Gaps = 24/226 (10%)
Query: 382 HVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID-GDD- 439
HVLD +AP+L+E R+ VLQVLQQ+GVSEEKL+NM+EVWNKID +EEMG +Y+D G+D
Sbjct: 1 HVLDSSAPDLDEQRSIVLQVLQQIGVSEEKLQNMLEVWNKIDLQEEEMGADKYLDNGEDD 60
Query: 440 -ISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE----DLGESMNKNHNDYSDG 494
+ + SRAE D SE + E + DD D ND VSE D+ E+M+ DYSDG
Sbjct: 61 VVDSLSRAEGGDMPSE-LSAEPV-----DDDDEND-IVSELSSGDVQETMDDREGDYSDG 113
Query: 495 WLLS---GDEQDNVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVKISARTGVGL 551
WL G E D W +DQQ ES KD + EKDS SQ Q P VK SA GVGL
Sbjct: 114 WLSGGGEGSEDDQGSPPRWKTMDDQQSESFKDRRMTEKDSCSQPQCIPHVKTSAVMGVGL 173
Query: 552 QELLEIIDERLKTLDDKQKSPNVVERDFFNKKWRPPRTEDSSVAVE 597
QELL +IDE+L+T QK P ER++F++KWRPP TED VAVE
Sbjct: 174 QELLALIDEKLET----QKVP---ERNYFDRKWRPPHTEDVGVAVE 212
>gi|393771693|ref|ZP_10360162.1| GTP-binding protein HflX [Novosphingobium sp. Rr 2-17]
gi|392722945|gb|EIZ80341.1| GTP-binding protein HflX [Novosphingobium sp. Rr 2-17]
Length = 447
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 135/328 (41%), Positives = 180/328 (54%), Gaps = 44/328 (13%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLE 169
VV ++ + RA T FG G +E I C N AE + V+ L+ IQQRNLE
Sbjct: 47 VVADAITIPIREPRAGTLFGEGQIENIAIGCTQNDAE------LVIVDGALTAIQQRNLE 100
Query: 170 RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGE 229
+ V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 101 EKLKRKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE--- 151
Query: 230 AEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
R GG GF+ G GET+++ RR I +R + + ++E+VRRTR + R R +
Sbjct: 152 --------RQRGGFGFLGGPGETQIEADRRLIRDRMAKIRRELEQVRRTRGLHRERREKA 203
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLL 349
+A+VGYTNAGKSTL + L+ + + + LFATLDP ++++ LP K +L
Sbjct: 204 P------WPVIALVGYTNAGKSTLFNRLTGASVMAQDLLFATLDPTMRAIRLPGVEKGIL 257
Query: 350 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV-- 407
SDTVGFISDLP QLV AF ATLEEV AD+++HV D + + + VL VL +GV
Sbjct: 258 SDTVGFISDLPTQLVAAFRATLEEVTAADVILHVRDIANADTDVQKRQVLDVLADLGVVP 317
Query: 408 -----------SEEKLKNMIEVWNKIDY 424
+ E L +IEVWNK D
Sbjct: 318 GEADLKKTTETASEPLIPIIEVWNKWDL 345
>gi|297621460|ref|YP_003709597.1| GTP-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376761|gb|ADI38591.1| GTP-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293719|emb|CCB91706.1| GTP-binding protein hflX [Waddlia chondrophila 2032/99]
Length = 434
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 172/303 (56%), Gaps = 31/303 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGEL--DAIFVNAILSGIQQRNLERAWGKPVLDRV 180
K A T G VE I E+ EL D I + ++ QQRNLE+ + PV+DR
Sbjct: 63 KFNASTLISSGKVEEI------GETAKELGVDVIVFDDEVTPGQQRNLEKIYSIPVIDRS 116
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
+II +F AH+KEAKLQ ELA L Y RL R+ +S + +
Sbjct: 117 EVIIGVFAQRAHSKEAKLQVELARLKYLAPRLKRMWTH--------------LSRQQATA 162
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG ++ G GE ++++ RR + + HL +I V+ R QR R R + T
Sbjct: 163 GGGAYLKGKGEKQIEIDRRLLKTKIFHLQKEINAVQAHRDTQRIQRERSE------IPTF 216
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
A+VGYTNAGKSTL++AL+++ +F++ +LFATLD + LP+ +++LL+DTVGFI LP
Sbjct: 217 AIVGYTNAGKSTLLNALTEAGIFTEDKLFATLDTTTRKFTLPNNQEILLTDTVGFIRKLP 276
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEE V+AD+L+H++D + P E ++VL ++G + K +I V N
Sbjct: 277 HLLVAAFRSTLEEAVQADILIHLIDSSHPMALEQAEATVEVLHELGAKD---KPVITVLN 333
Query: 421 KID 423
KID
Sbjct: 334 KID 336
>gi|256821744|ref|YP_003145707.1| GTP-binding proten HflX [Kangiella koreensis DSM 16069]
gi|256795283|gb|ACV25939.1| GTP-binding proten HflX [Kangiella koreensis DSM 16069]
Length = 433
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/311 (39%), Positives = 181/311 (58%), Gaps = 34/311 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G ++ IK + + + I N LS Q+RN+ERA V+DR+GLI++IF
Sbjct: 61 FIGSGKIDEIKS----VKQATDANVIIFNHNLSPAQERNIERAVEARVIDRIGLILDIFA 116
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 117 QRASTFEGKLQVELAQLRHLSTRLIR----------GWTHLE-------RQKGGIG-LRG 158
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER ++ ++E+V + R R +R+R + TV++VGYTNA
Sbjct: 159 PGETQLETDRRLLRERLKYIDKRLEKVSKQREQGRRSRKRAN------IKTVSIVGYTNA 212
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ + + ++ +LFATLDP L+ + LP G V+++DTVGFI LP +LV AF
Sbjct: 213 GKSTLFNYLTTAGVLAEDKLFATLDPTLRRISLPQGTDVIIADTVGFIRHLPHELVAAFR 272
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
ATLEE VEAD+L+HV+D + +E+ V +VL ++G E + + E++NKID +
Sbjct: 273 ATLEESVEADVLLHVIDAASDRRDENMEQVEEVLTEIGA--ETIPRL-EIYNKIDLIE-- 327
Query: 429 MGDVEYIDGDD 439
G +ID DD
Sbjct: 328 -GAEPHIDRDD 337
>gi|208779443|ref|ZP_03246789.1| protease, GTP-binding subunit [Francisella novicida FTG]
gi|208745243|gb|EDZ91541.1| protease, GTP-binding subunit [Francisella novicida FTG]
Length = 435
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 183/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|210623986|ref|ZP_03294137.1| hypothetical protein CLOHIR_02089, partial [Clostridium hiranonis
DSM 13275]
gi|210153263|gb|EEA84269.1| hypothetical protein CLOHIR_02089 [Clostridium hiranonis DSM 13275]
Length = 369
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 179/319 (56%), Gaps = 38/319 (11%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K + + G G ++ +K + + D + N LS Q +N+E V+DR L
Sbjct: 1 KVNSTFYMGSGKIDELKNLV----EENNADIVIFNNELSASQVKNIEEEINCNVIDRTAL 56
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A T+E+KLQ E+A L Y+ RLV G + L GR SGG
Sbjct: 57 ILDIFANRAKTRESKLQVEVAKLQYELPRLV---GSNEDL--------------GRQSGG 99
Query: 243 RGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G + GAGET+L+L RRRI ++ ++L ++E ++ R VQ++ R++ + VA
Sbjct: 100 VGTKNRGAGETKLELDRRRIEDKIANLNKELEVLKNQREVQKSKRKKSN------IPNVA 153
Query: 302 VVGYTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVG 354
+VGYTNAGKS++++AL D +F LFATL+ ++++ L + + LLSDTVG
Sbjct: 154 LVGYTNAGKSSVMNALVEKFINDEDKKVFEKNMLFATLETYVRNIKLDNNKSFLLSDTVG 213
Query: 355 FISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN 414
F+ DLP LV AF +TLEEV +ADLL+HV+D + PN E H + L Q+G +
Sbjct: 214 FVGDLPHSLVKAFRSTLEEVCDADLLLHVIDISNPNYENHINVTNETLNQIGADNIPV-- 271
Query: 415 MIEVWNKIDYHDEEMGDVE 433
I V+NK+D + + ++E
Sbjct: 272 -IYVYNKVDLMELDTFNIE 289
>gi|163846033|ref|YP_001634077.1| GTP-binding proten HflX [Chloroflexus aurantiacus J-10-fl]
gi|222523761|ref|YP_002568231.1| GTP-binding proten HflX [Chloroflexus sp. Y-400-fl]
gi|163667322|gb|ABY33688.1| GTP-binding proten HflX [Chloroflexus aurantiacus J-10-fl]
gi|222447640|gb|ACM51906.1| GTP-binding proten HflX [Chloroflexus sp. Y-400-fl]
Length = 445
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 170/295 (57%), Gaps = 23/295 (7%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F GPG V+ + + + D I + LS Q RNLE V+DR GLI++IF
Sbjct: 69 FIGPGKVKEVAA----LREQTQADLIVFDDELSPAQTRNLEEELQTQVIDRTGLILDIFA 124
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA T E +LQ ELA Y RL R + T E +A G G RG
Sbjct: 125 RHARTHEGRLQVELAQYQYLLPRLRR------QWTHLERQAGTGGTAAGGVVGLRG---- 174
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I R + L Q+ +V R R + R RR+ G + +A+VGYTNA
Sbjct: 175 PGETQLEIDRRLIERRIAWLKDQLADVHRHRELYRQRRRQTG------IPVIALVGYTNA 228
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++A++ +D+ ++ +LFATLDP + V+LP L++DTVGFI LP QLV AF
Sbjct: 229 GKSTLLNAMTGADVLAEDKLFATLDPTTRQVLLPGNIVALMTDTVGFIQKLPPQLVAAFR 288
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEE+ EADLL+HV+D T N +EH TV Q L+++GV K ++ V NKID
Sbjct: 289 ATLEEIEEADLLLHVVDVTHRNAQEHAQTVEQTLRELGVDH---KPVLTVLNKID 340
>gi|423082085|ref|ZP_17070680.1| GTP-binding protein HflX [Clostridium difficile 002-P50-2011]
gi|423085689|ref|ZP_17074131.1| GTP-binding protein HflX [Clostridium difficile 050-P50-2011]
gi|357549335|gb|EHJ31182.1| GTP-binding protein HflX [Clostridium difficile 002-P50-2011]
gi|357549606|gb|EHJ31452.1| GTP-binding protein HflX [Clostridium difficile 050-P50-2011]
Length = 427
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 177/308 (57%), Gaps = 43/308 (13%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFV--NAILSGIQQRNLERAWGKPVLDRVGLI 183
A + G G VE I+ + + LDA V N LSG Q RN+E G+ V+DR LI
Sbjct: 58 AAYYIGKGKVEEIRAYSDS------LDATLVIFNDELSGAQIRNIENVVGRKVIDRTTLI 111
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A +KE KLQ ELA L Y+ RL +G GE +S G G G R
Sbjct: 112 LDIFAQRALSKEGKLQVELAQLKYRLPRL-----------YGMGGE---MSRTGAGIGTR 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G GE +L++ +R IL + + + +++EV++ R QR R + + VA+V
Sbjct: 158 G----PGEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSN------IPIVALV 207
Query: 304 GYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
GYTNAGKSTL++ L + ++F LFATLD L+ +LP+ ++ L+ DTVGF
Sbjct: 208 GYTNAGKSTLLNELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGF 267
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
+S LP LV+AF ATLEEV ADL++HV+D T + E ++T VL+++GV+++K
Sbjct: 268 VSKLPHDLVEAFKATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDKK---H 324
Query: 416 IEVWNKID 423
I V+NK+D
Sbjct: 325 ILVYNKVD 332
>gi|255654837|ref|ZP_05400246.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-23m63]
gi|296449580|ref|ZP_06891357.1| GTP-binding protein HflX [Clostridium difficile NAP08]
gi|296878097|ref|ZP_06902112.1| GTP-binding protein HflX [Clostridium difficile NAP07]
gi|296261644|gb|EFH08462.1| GTP-binding protein HflX [Clostridium difficile NAP08]
gi|296430850|gb|EFH16682.1| GTP-binding protein HflX [Clostridium difficile NAP07]
Length = 427
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 177/308 (57%), Gaps = 43/308 (13%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFV--NAILSGIQQRNLERAWGKPVLDRVGLI 183
A + G G VE I+ + + LDA V N LSG Q RN+E G+ V+DR LI
Sbjct: 58 AAYYIGKGKVEEIRAYSDS------LDATLVIFNDELSGAQIRNIENVVGRKVIDRTTLI 111
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A +KE KLQ ELA L Y+ RL +G GE +S G G G R
Sbjct: 112 LDIFAQRALSKEGKLQVELAQLKYRLPRL-----------YGMGGE---MSRTGAGIGTR 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G GE +L++ +R IL + + + +++EV++ R QR R + + VA+V
Sbjct: 158 G----PGEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSN------IPIVALV 207
Query: 304 GYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
GYTNAGKSTL++ L + ++F LFATLD L+ +LP+ ++ L+ DTVGF
Sbjct: 208 GYTNAGKSTLLNELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGF 267
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
+S LP LV+AF ATLEEV ADL++HV+D T + E ++T VL+++GV+++K
Sbjct: 268 VSKLPHDLVEAFKATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDKK---H 324
Query: 416 IEVWNKID 423
I V+NK+D
Sbjct: 325 ILVYNKVD 332
>gi|254974410|ref|ZP_05270882.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-66c26]
gi|255091801|ref|ZP_05321279.1| putative ATP/GTP-binding protein [Clostridium difficile CIP 107932]
gi|255313536|ref|ZP_05355119.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-76w55]
gi|255516221|ref|ZP_05383897.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-97b34]
gi|255649318|ref|ZP_05396220.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-37x79]
gi|260682488|ref|YP_003213773.1| ATP/GTP-binding protein [Clostridium difficile CD196]
gi|260686087|ref|YP_003217220.1| ATP/GTP-binding protein [Clostridium difficile R20291]
gi|306519413|ref|ZP_07405760.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-32g58]
gi|384360067|ref|YP_006197919.1| ATP/GTP-binding protein [Clostridium difficile BI1]
gi|260208651|emb|CBA61408.1| putative ATP/GTP-binding protein [Clostridium difficile CD196]
gi|260212103|emb|CBE02716.1| putative ATP/GTP-binding protein [Clostridium difficile R20291]
Length = 427
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 177/308 (57%), Gaps = 43/308 (13%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFV--NAILSGIQQRNLERAWGKPVLDRVGLI 183
A + G G VE I+ + + LDA V N LSG Q RN+E G+ V+DR LI
Sbjct: 58 AAYYIGKGKVEEIRAYSDS------LDATLVIFNDELSGAQIRNIENVVGRKVIDRTTLI 111
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A +KE KLQ ELA L Y+ RL +G GE +S G G G R
Sbjct: 112 LDIFAQRALSKEGKLQVELAQLKYRLPRL-----------YGMGGE---MSRTGAGIGTR 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G GE +L++ +R IL + + + +++EV++ R QR R + + VA+V
Sbjct: 158 G----PGEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSN------IPIVALV 207
Query: 304 GYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
GYTNAGKSTL++ L + ++F LFATLD L+ +LP+ ++ L+ DTVGF
Sbjct: 208 GYTNAGKSTLLNELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGF 267
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
+S LP LV+AF ATLEEV ADL++HV+D T + E ++T VL+++GV+++K
Sbjct: 268 VSKLPHDLVEAFKATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDKK---H 324
Query: 416 IEVWNKID 423
I V+NK+D
Sbjct: 325 ILVYNKVD 332
>gi|126698368|ref|YP_001087265.1| GTP-binding protein, HflX type [Clostridium difficile 630]
gi|255099903|ref|ZP_05328880.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-63q42]
gi|255305792|ref|ZP_05349964.1| putative ATP/GTP-binding protein [Clostridium difficile ATCC 43255]
gi|115249805|emb|CAJ67622.1| putative GTP-binding protein, HflX type [Clostridium difficile 630]
Length = 427
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 177/308 (57%), Gaps = 43/308 (13%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFV--NAILSGIQQRNLERAWGKPVLDRVGLI 183
A + G G VE I+ + + LDA V N LSG Q RN+E G+ V+DR LI
Sbjct: 58 AAYYIGKGKVEEIRAYSDS------LDATLVIFNDELSGAQIRNIENVVGRKVIDRTTLI 111
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A +KE KLQ ELA L Y+ RL +G GE +S G G G R
Sbjct: 112 LDIFAQRALSKEGKLQVELAQLKYRLPRL-----------YGMGGE---MSRTGAGIGTR 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G GE +L++ +R IL + + + +++EV++ R QR R + + VA+V
Sbjct: 158 G----PGEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSN------IPIVALV 207
Query: 304 GYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
GYTNAGKSTL++ L + ++F LFATLD L+ +LP+ ++ L+ DTVGF
Sbjct: 208 GYTNAGKSTLLNELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGF 267
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
+S LP LV+AF ATLEEV ADL++HV+D T + E ++T VL+++GV+++K
Sbjct: 268 VSKLPHDLVEAFKATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDKK---H 324
Query: 416 IEVWNKID 423
I V+NK+D
Sbjct: 325 ILVYNKVD 332
>gi|302386875|ref|YP_003822697.1| GTP-binding proten HflX [Clostridium saccharolyticum WM1]
gi|347602420|sp|D9R4W7.1|HFLX_CLOSW RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|302197503|gb|ADL05074.1| GTP-binding proten HflX [Clostridium saccharolyticum WM1]
Length = 423
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 175/301 (58%), Gaps = 35/301 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G +E IK I ELDA I + LS Q RNLE A V+DR +I++
Sbjct: 60 TYLGKGKIEEIKDRI------WELDATGIVCDDELSPAQLRNLEGALDTKVMDRTMVILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A T+E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 114 IFASRAVTREGKIQVELAQLRYRSARLVGLRSSLSRLGGGIGTRG--------------- 158
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +L++ RR I +R L +++E+V+R R V R R D + A+VGY
Sbjct: 159 ---PGEKKLEMDRRLIHDRIGMLKAELEDVKRHREVVRQQR------DKNHVPAAAIVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL++ L+D+ + ++ +LFATLDP +++ LP G+++LL+DTVGFI LP L++
Sbjct: 210 TNAGKSTLLNRLTDAGILAEDKLFATLDPTTRNLSLPGGQQILLTDTVGFIRKLPHHLIE 269
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF +TLEE +D+++HV+DC+ P ++ V + L+++G+ + K MI V+NKID
Sbjct: 270 AFKSTLEEAKYSDIILHVVDCSNPQMDMQMYVVYETLRELGICD---KIMITVFNKIDAA 326
Query: 426 D 426
D
Sbjct: 327 D 327
>gi|254374455|ref|ZP_04989937.1| GTP-binding protein [Francisella novicida GA99-3548]
gi|385793024|ref|YP_005826000.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|151572175|gb|EDN37829.1| GTP-binding protein [Francisella novicida GA99-3548]
gi|332678349|gb|AEE87478.1| GTP-binding protein HflX [Francisella cf. novicida Fx1]
Length = 435
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 183/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|56707756|ref|YP_169652.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670227|ref|YP_666784.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis FSC198]
gi|254370260|ref|ZP_04986265.1| protease [Francisella tularensis subsp. tularensis FSC033]
gi|254874569|ref|ZP_05247279.1| protease [Francisella tularensis subsp. tularensis MA00-2987]
gi|379717006|ref|YP_005305342.1| GTP-binding protein HflX [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725610|ref|YP_005317796.1| GTP-binding protein HflX [Francisella tularensis subsp. tularensis
TI0902]
gi|385794392|ref|YP_005830798.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis NE061598]
gi|421755261|ref|ZP_16192211.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 80700075]
gi|56604248|emb|CAG45264.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320560|emb|CAL08647.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis FSC198]
gi|151568503|gb|EDN34157.1| protease [Francisella tularensis subsp. tularensis FSC033]
gi|254840568|gb|EET19004.1| protease [Francisella tularensis subsp. tularensis MA00-2987]
gi|282158927|gb|ADA78318.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis NE061598]
gi|377827059|gb|AFB80307.1| GTP-binding protein HflX [Francisella tularensis subsp. tularensis
TI0902]
gi|377828683|gb|AFB78762.1| GTP-binding protein HflX [Francisella tularensis subsp. tularensis
TIGB03]
gi|409088596|gb|EKM88660.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 80700075]
Length = 435
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 183/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|195536342|ref|ZP_03079349.1| GTPase of unknown function family protein, putative [Francisella
novicida FTE]
gi|194372819|gb|EDX27530.1| GTPase of unknown function family protein, putative [Francisella
tularensis subsp. novicida FTE]
Length = 403
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 183/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 11 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 66
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 67 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 113
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 114 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 168
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 169 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 223
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 224 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 281
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 282 -KETICVYNKID 292
>gi|118497641|ref|YP_898691.1| protease, GTP-binding subunit [Francisella novicida U112]
gi|118423547|gb|ABK89937.1| protease, GTP-binding subunit [Francisella novicida U112]
Length = 436
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 183/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 44 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 99
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 100 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 146
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 147 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 201
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 202 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 256
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 257 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 314
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 315 -KETICVYNKID 325
>gi|423090444|ref|ZP_17078743.1| GTP-binding protein HflX [Clostridium difficile 70-100-2010]
gi|357556553|gb|EHJ38148.1| GTP-binding protein HflX [Clostridium difficile 70-100-2010]
Length = 427
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 177/308 (57%), Gaps = 43/308 (13%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFV--NAILSGIQQRNLERAWGKPVLDRVGLI 183
A + G G VE I+ + + LDA V N LSG Q RN+E G+ V+DR LI
Sbjct: 58 AAYYIGKGKVEEIRAYSDS------LDATLVIFNDELSGAQIRNIENVVGRKVIDRTTLI 111
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A +KE KLQ ELA L Y+ RL +G GE +S G G G R
Sbjct: 112 LDIFAQRALSKEGKLQVELAQLKYRLPRL-----------YGMGGE---MSRTGAGIGTR 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G GE +L++ +R IL + + + +++EV++ R QR R + + VA+V
Sbjct: 158 G----PGEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSN------IPIVALV 207
Query: 304 GYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
GYTNAGKSTL++ L + ++F LFATLD L+ +LP+ ++ L+ DTVGF
Sbjct: 208 GYTNAGKSTLLNELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGF 267
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
+S LP LV+AF ATLEEV ADL++HV+D T + E ++T VL+++GV+++K
Sbjct: 268 VSKLPHDLVEAFKATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDKK---H 324
Query: 416 IEVWNKID 423
I V+NK+D
Sbjct: 325 ILVYNKVD 332
>gi|307608760|emb|CBW98143.1| hypothetical protein LPW_00091 [Legionella pneumophila 130b]
Length = 414
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 176/311 (56%), Gaps = 31/311 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ + +LFATLDP ++ + LP +L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATLEE +ADLL+HV+D + PN E V +VL + V+ +I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDDLKVNN---IPVIQVFNKIDLQ 322
Query: 426 DEEMGDVEYID 436
+ ++Y +
Sbjct: 323 EGWQPKIDYTE 333
>gi|54113821|gb|AAV29544.1| NT02FT0764 [synthetic construct]
Length = 435
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 183/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|156403051|ref|XP_001639903.1| predicted protein [Nematostella vectensis]
gi|156227034|gb|EDO47840.1| predicted protein [Nematostella vectensis]
Length = 517
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 182/305 (59%), Gaps = 26/305 (8%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGE--LDAIFVN-AILSGIQQRNLERAWGKPVLDR 179
K +FFG G +E ++ I+ A+ E LDA++++ L+ Q + LE W V DR
Sbjct: 132 KVDTKSFFGKGKIEELQERISQAKQIEENTLDAVYLDVGQLTPRQHKELEVFWDVKVFDR 191
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
G++++IF A T EAK+Q ELA + Y +SRLV G+ V + RG
Sbjct: 192 FGIVLQIFKERAQTAEAKIQVELAEIPYIRSRLV--------------GDDSVEFDQQRG 237
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
G FISG+GET+L+ +RR + ER L ++E +R+ R R R++ R +
Sbjct: 238 --GTHFISGSGETQLERERRVLTERELKLKKKLEALRKHREHVRHERQK------RHIPV 289
Query: 300 VAVVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
V+VVGYTNAGK+TL+ +L+ D+ + D +LFATLD LPSG +VL DTVGF+SD
Sbjct: 290 VSVVGYTNAGKTTLIKSLTGDNKMQPDNKLFATLDVTAHPGKLPSGMQVLFVDTVGFVSD 349
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP +LV++F ATLE++V++DL+VHV D P E VL VLQQ+ + +K +I V
Sbjct: 350 LPPELVESFSATLEDMVDSDLVVHVRDVCHPEQEAQNEDVLSVLQQLKLRPALMKTIINV 409
Query: 419 WNKID 423
+NKID
Sbjct: 410 YNKID 414
>gi|254369245|ref|ZP_04985257.1| protease [Francisella tularensis subsp. holarctica FSC022]
gi|157122195|gb|EDO66335.1| protease [Francisella tularensis subsp. holarctica FSC022]
Length = 435
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 183/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +++ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEIIFSD 255
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|187931478|ref|YP_001891462.1| protease, GTP-binding subunit [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712387|gb|ACD30684.1| protease, GTP-binding subunit [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 436
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 184/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 44 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 99
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 100 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 146
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G+GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 147 ----LERQKGGIGVRGGSGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 201
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 202 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 256
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 257 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 314
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 315 -KETICVYNKID 325
>gi|41582279|gb|AAS07893.1| GTP-binding protein HflX [uncultured marine bacterium 463]
Length = 423
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/296 (41%), Positives = 178/296 (60%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E I+ +N E+ + + N ILS Q+RNLE+ VLDR GLI++IF
Sbjct: 57 TFIGSGKLEEIRDEVNLQEA----EVVMFNHILSPSQERNLEQELECRVLDRTGLILDIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E KLQ ELA L + +RLVR G T R GG G +
Sbjct: 113 AQRARTHEGKLQVELAQLQHVATRLVR----------GWTHLE-------RQKGGIG-LR 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + R + +++E+VR+ R R +R+R + + TV++VGYTN
Sbjct: 155 GPGETQLETDRRLLRIRIKSITARLEKVRKQRDQGRRSRKR------QEIPTVSLVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + ++DS +++ +LFATLDP L+ + L + V+L+DTVGFI+ LP +LV+AF
Sbjct: 209 AGKSTLFNYITDSGVYAADQLFATLDPTLRRLELENVGPVVLADTVGFIAHLPHKLVEAF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEE + ADLL+HV+D + E++ V +VLQ++G E +E++NK+D
Sbjct: 269 KATLEETLNADLLLHVIDAASDEREDNIYQVHEVLQEIGADE---IPRLEIYNKLD 321
>gi|254373007|ref|ZP_04988496.1| hypothetical protein FTCG_00580 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570734|gb|EDN36388.1| hypothetical protein FTCG_00580 [Francisella novicida GA99-3549]
Length = 435
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 183/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RL++ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLIK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|254481040|ref|ZP_05094286.1| GTP-binding proten HflX [marine gamma proteobacterium HTCC2148]
gi|214038835|gb|EEB79496.1| GTP-binding proten HflX [marine gamma proteobacterium HTCC2148]
Length = 436
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/296 (41%), Positives = 178/296 (60%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E I+ +N E+ + + N ILS Q+RNLE+ VLDR GLI++IF
Sbjct: 70 TFIGSGKLEEIRDEVNLQEA----EVVMFNHILSPSQERNLEQELECRVLDRTGLILDIF 125
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E KLQ ELA L + +RLVR G T R GG G +
Sbjct: 126 AQRARTHEGKLQVELAQLQHVATRLVR----------GWTHLE-------RQKGGIG-LR 167
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + R + +++E+VR+ R R +R+R + + TV++VGYTN
Sbjct: 168 GPGETQLETDRRLLRIRIKSITARLEKVRKQRDQGRRSRKR------QEIPTVSLVGYTN 221
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + ++DS +++ +LFATLDP L+ + L + V+L+DTVGFI+ LP +LV+AF
Sbjct: 222 AGKSTLFNYITDSGVYAADQLFATLDPTLRRLELENVGPVVLADTVGFIAHLPHKLVEAF 281
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEE + ADLL+HV+D + E++ V +VLQ++G E +E++NK+D
Sbjct: 282 KATLEETLNADLLLHVIDAASDEREDNIYQVHEVLQEIGADE---IPRLEIYNKLD 334
>gi|319786414|ref|YP_004145889.1| GTP-binding proten HflX [Pseudoxanthomonas suwonensis 11-1]
gi|317464926|gb|ADV26658.1| GTP-binding proten HflX [Pseudoxanthomonas suwonensis 11-1]
Length = 444
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 172/296 (58%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E +K AE+ G D I VN LS +Q+RNLERA + V+DR GLI++IF
Sbjct: 55 TLIGSGKLEEVKA---AAEATGA-DLILVNHPLSPVQERNLERALQRRVVDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRARSHEGKLQVELAQLKHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRLEQLQKRLEKVEVQHTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +AL+ +D ++ +LFATLDP ++ + LP G V+L+DTVGF+ DLP +LV AF
Sbjct: 208 AGKSTLFNALTGADAYAADQLFATLDPTVRRISLPGG-SVVLADTVGFVRDLPHELVAAF 266
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL E EADLL+HV+D P EE V VL +VG E L ++ V+NKID
Sbjct: 267 RSTLSEAREADLLLHVVDAADPLREERIAQVDSVLSEVGAGE--LPQLL-VFNKID 319
>gi|134302062|ref|YP_001122031.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis WY96-3418]
gi|421751876|ref|ZP_16188913.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis AS_713]
gi|421753731|ref|ZP_16190720.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 831]
gi|421757457|ref|ZP_16194337.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 80700103]
gi|421759314|ref|ZP_16196147.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 70102010]
gi|424674632|ref|ZP_18111548.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 70001275]
gi|134049839|gb|ABO46910.1| GTP-binding protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|409086413|gb|EKM86532.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 831]
gi|409086603|gb|EKM86719.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis AS_713]
gi|409091040|gb|EKM91045.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 70102010]
gi|409092545|gb|EKM92516.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 80700103]
gi|417434676|gb|EKT89618.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 70001275]
Length = 435
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 183/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G +
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK-----GWIHLE------ 147
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 148 ------RQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|408790193|ref|ZP_11201823.1| GTP-binding protein HflX [Lactobacillus florum 2F]
gi|408520533|gb|EKK20578.1| GTP-binding protein HflX [Lactobacillus florum 2F]
Length = 420
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 167/305 (54%), Gaps = 35/305 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G VE + + + I N LS Q RNLE+A V+DR GLI+E
Sbjct: 50 AATYFGKGKVEEVAQLVVTTNA----STIIANDELSPSQIRNLEKATNATVMDRTGLILE 105
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF AHT+EAKLQ ELA L Y+ RL TG ++ + + G G
Sbjct: 106 IFATRAHTREAKLQVELAKLKYQLPRL-------------RTGASQHLDQQSAGGGLAN- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GET+L+L RR I + +H+ +++E ++ A QR +R S L TVA+VGY
Sbjct: 152 -RGTGETKLELNRRTIEHQINHVRHELKESEQSHATQR---KRRAESH---LKTVALVGY 204
Query: 306 TNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
TNAGKST+++ L D +F LFATLD ++ + LP R LLSDTVGF+S
Sbjct: 205 TNAGKSTIMNQLVQRFGENEDKQVFVKNMLFATLDTSVRKLELPGHRSCLLSDTVGFVSK 264
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP QLV AF +TL E +ADLL+ V+D + PN T LQ++GV E MI V
Sbjct: 265 LPHQLVAAFQSTLSEAAQADLLLQVVDYSDPNQALMMETTNATLQEIGVPELP---MITV 321
Query: 419 WNKID 423
+NK D
Sbjct: 322 FNKAD 326
>gi|330444282|ref|YP_004377268.1| GTP binding protein [Chlamydophila pecorum E58]
gi|328807392|gb|AEB41565.1| GTP binding protein [Chlamydophila pecorum E58]
Length = 421
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 173/298 (58%), Gaps = 26/298 (8%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A TF G + I+ + S G L V+ +S QQRNLER G VLDR LI+E
Sbjct: 44 ASTFLNEGKLLEIEGILEAYPSLGTL---IVDEEISASQQRNLERRLGVAVLDRTELILE 100
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A + EA LQ ELA Y RL R+ G +S + G G GF
Sbjct: 101 IFASRALSLEAGLQVELAQAKYLLPRLKRMWGH--------------LSRQKSGGGAGGF 146
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GE +++L RR + E+ L +QI E+ + R +R A+ R G + T A++GY
Sbjct: 147 VKGEGEKQIELDRRMVQEKIHKLSAQIREIEKQREGRRKAKVRSG------IPTFALIGY 200
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TN+GKS+L++ L+ +D +++ +LFATLDP+ ++ VLP GR+VL++DTVGFI LP LV
Sbjct: 201 TNSGKSSLLNVLTAADTYTEDKLFATLDPKTRTSVLPGGRRVLVTDTVGFIRKLPHTLVA 260
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF +TLE + D+L+HV+D + P EEH T +L+++ + K MI V NK+D
Sbjct: 261 AFKSTLEAALHEDVLLHVVDASHPLAEEHIQTTFALLKELHIEHPK---MITVLNKVD 315
>gi|307243739|ref|ZP_07525879.1| GTP-binding protein HflX [Peptostreptococcus stomatis DSM 17678]
gi|306492948|gb|EFM64961.1| GTP-binding protein HflX [Peptostreptococcus stomatis DSM 17678]
Length = 437
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 174/309 (56%), Gaps = 39/309 (12%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+ G G +E IK + + + + N LSG Q RN+E GK ++DR LI++
Sbjct: 68 AATYMGSGKIEEIKAYADSLNAS----MVVFNDELSGAQIRNIEDIVGKKIIDRTTLILD 123
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A ++E KLQ ELA L Y RL R+ G G++ S G G G RG
Sbjct: 124 IFAQRALSREGKLQVELAQLKY---RLPRLYGMGGQM-----------SRTGAGIGTRG- 168
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +L+ +R IL R +++ +++EV + R +QRA R ++ + VA+VGY
Sbjct: 169 ---PGEQKLEKDKRHILNRAANIRKELKEVVKIRDIQRAQRSKNR------VPIVALVGY 219
Query: 306 TNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
TNAGKSTL++ + D ++F LFATLD L+ +LP+ ++ L+ DTVGF+S
Sbjct: 220 TNAGKSTLLNEIIKTHPDYEKDKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGFVS 279
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP LVDAF ATLEEV ADL++H++D T + + ++T VL+ + + K I
Sbjct: 280 KLPHDLVDAFKATLEEVTYADLILHIIDATNTSSDIQKSTTESVLKDLKADD---KYTIT 336
Query: 418 VWNKIDYHD 426
V+NKID D
Sbjct: 337 VYNKIDKLD 345
>gi|392941156|ref|ZP_10306800.1| LOW QUALITY PROTEIN: GTP-binding protein HflX [Thermoanaerobacter
siderophilus SR4]
gi|392292906|gb|EIW01350.1| LOW QUALITY PROTEIN: GTP-binding protein HflX [Thermoanaerobacter
siderophilus SR4]
Length = 413
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 176/296 (59%), Gaps = 33/296 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K AE++ E+D + VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELKFF---AENQ-EVDLVIVNDELTGTQIKNMEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE LQ ELA L Y+ RL + G RL G G
Sbjct: 114 KRAKSKEGMLQVELAQLKYRLPRLAGLGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE+ R R++QR R+++ + +A+VGYTNA
Sbjct: 156 PGETKLETDRRHIKNRIKAIEKKLEEIERHRSLQRERRKKNR------IPVIAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++AL++++++ + +LFATLDP + +VL SGR+V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTNAEVYVEDKLFATLDPTARRLVLSSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG-VSEEKLKNMIEVWNKID 423
+TLEEV ADLL+HV+D T P++EE V +VL +G ++ K I V+NKID
Sbjct: 270 STLEEVKYADLLLHVIDVTLPDMEEKIKVVEKVLSDLGAINTPK----INVFNKID 321
>gi|89256256|ref|YP_513618.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica LVS]
gi|115314713|ref|YP_763436.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica OSU18]
gi|290953596|ref|ZP_06558217.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica URFT1]
gi|423050604|ref|YP_007009038.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica F92]
gi|89144087|emb|CAJ79338.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica LVS]
gi|115129612|gb|ABI82799.1| GTP-binding protein HflX [Francisella tularensis subsp. holarctica
OSU18]
gi|421951326|gb|AFX70575.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica F92]
Length = 435
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 182/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQGLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +++ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEIIFSD 255
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|329957488|ref|ZP_08297963.1| GTP-binding protein HflX [Bacteroides clarus YIT 12056]
gi|328522365|gb|EGF49474.1| GTP-binding protein HflX [Bacteroides clarus YIT 12056]
Length = 419
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 184/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLDQANSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R L VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------LIRVALVGYTNVGKSTLMTLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVII-ENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G S K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLADIGASG---KPMILVFNKIDAY 339
>gi|422938675|ref|YP_007011822.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica FSC200]
gi|407293826|gb|AFT92732.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica FSC200]
Length = 436
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 182/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 44 VVLQGLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 99
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 100 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 146
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 147 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 201
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +++ SD
Sbjct: 202 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEIIFSD 256
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 257 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 314
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 315 -KETICVYNKID 325
>gi|114319735|ref|YP_741418.1| HSR1-like GTP-binding protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114226129|gb|ABI55928.1| GTP-binding protein HflX [Alkalilimnicola ehrlichii MLHE-1]
Length = 421
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 175/302 (57%), Gaps = 31/302 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE + I AE +D + ++ +S Q+RNLERA+ VLDR GLI++IF
Sbjct: 45 FLGRGKVEELAARIP-AEG---IDLVLIDHAISPAQERNLERAFRCRVLDRTGLILDIFA 100
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + SRLVR S R GG G + G
Sbjct: 101 QRARSHEGKLQVELAQLRHIASRLVRG-----------------WSHLERQKGGIG-LRG 142
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR + R L ++E+VRR RA R A + V++VGYTNA
Sbjct: 143 PGETQLEMDRRMLGTRIKQLERKLEKVRRQRAQGRQA------RRRQEFPVVSLVGYTNA 196
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL +AL+ S L++D RLFATLD L+ + LP G+ V+L+DTVGFISDLP LV AF
Sbjct: 197 GKSTLFNALTGSGLYADDRLFATLDTTLRRLELPDGQPVILADTVGFISDLPHGLVAAFR 256
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
+TLEEV E+DLL+HV+D P+ EH V QVL +G SE ++ V+NK D
Sbjct: 257 STLEEVGESDLLLHVVDAADPDRREHARQVQQVLADIGASE---VPVLTVYNKADLCQHP 313
Query: 429 MG 430
+G
Sbjct: 314 VG 315
>gi|383762918|ref|YP_005441900.1| GTP-binding protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381383186|dbj|BAM00003.1| GTP-binding protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 475
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 29/303 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGK--PVLDRVGLI 183
T G G +E ++ + EL A + + LS QQR LE+A G+ V+DR LI
Sbjct: 89 TLIGVGKLEELRAAV------AELGANMVIFDEELSPRQQRELEKALGEEIKVIDRTALI 142
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF HA T+E +Q ELA Y+ RL R T A R G+ G
Sbjct: 143 LDIFARHARTREGAVQVELAQYEYRLPRLTR----------AWTHLARQAGGRAGGATGG 192
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
+ G GET+L++ RR I R + L ++ E+R+ R R+ RR+ L +A+V
Sbjct: 193 VGVRGPGETQLEVDRREINRRIAFLKQELAEIRKHREQYRSQRRQSA------LPLIALV 246
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQL 363
GYTNAGKSTL++A++D+D+ ++ +LFATLDP + V LPS R VL SDTVGFI LPL L
Sbjct: 247 GYTNAGKSTLLNAIADADVVAEDQLFATLDPTTRRVRLPSDRLVLFSDTVGFIQKLPLTL 306
Query: 364 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
V AF +TLEEV EADLLVHV+D + PN+EE V ++L+ +G ++ K ++ NKID
Sbjct: 307 VAAFRSTLEEVNEADLLVHVVDISHPNMEEQIAAVEEILEDLGAAD---KPIVMALNKID 363
Query: 424 YHD 426
D
Sbjct: 364 RLD 366
>gi|366052541|ref|ZP_09450263.1| GTP-binding protein HflX [Lactobacillus suebicus KCTC 3549]
Length = 428
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/322 (37%), Positives = 175/322 (54%), Gaps = 38/322 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G VE + + + + I N LS Q RNLE A V+DR LI+E
Sbjct: 55 AATYFGKGKVEELAELV----AATNVATIVTNDELSPSQIRNLEEATKARVMDRTALILE 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A +KEAKLQ E+A L Y+ RL + RL + G+GG F
Sbjct: 111 IFAKRAQSKEAKLQVEIAQLQYRLPRLKT--SANQRLD------------QQTGAGGGSF 156
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L++ RR I +HL ++ E+ ++ QR R D RG+ T A+VG
Sbjct: 157 TNRGSGETKLEMNRRTIQNAITHLRGELAELNKSSETQRQQR------DKRGIPTAALVG 210
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTNAGKST+++ L + +F LFATLD ++ + LP ++ LLSDTVGF+S
Sbjct: 211 YTNAGKSTIMNGLVREFGIDDEKQVFEKNMLFATLDTSVRQLTLPDQKQFLLSDTVGFVS 270
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP LV+AF +TL E ADLL+ V+D + P+ +E T L+++G+ + MI
Sbjct: 271 KLPTHLVEAFKSTLAEAANADLLIQVIDYSDPHYQEMMQTTENTLKEIGIKDIP---MIL 327
Query: 418 VWNKIDYHDEEMGDVEYIDGDD 439
V+NK D + + +DGDD
Sbjct: 328 VFNKADKMEVQF---PTMDGDD 346
>gi|147902718|ref|NP_001087175.1| putative GTP-binding protein 6 [Xenopus laevis]
gi|82182198|sp|Q6DCC6.1|GTPB6_XENLA RecName: Full=Putative GTP-binding protein 6
gi|50418397|gb|AAH78122.1| MGC83645 protein [Xenopus laevis]
Length = 527
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 179/321 (55%), Gaps = 28/321 (8%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQR 166
LP VV + + + FG G +T+ I G ++ A+F+N LS + ++
Sbjct: 141 LPNWSVVNTLIMSTKSPDSKLIFGKGNFQTLTDVIKGHP---QITAVFLNVERLSSLTEK 197
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
+E AWG V DR +++ IF +AHTKEAKLQ LA L +S L
Sbjct: 198 EMEEAWGVKVFDRYTVVLNIFRFNAHTKEAKLQIALAELPLLRSSL-------------- 243
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
+ E +G G R +I G+GET L++Q+R + ER + +E+V++ R + R R
Sbjct: 244 --KNETAHMDQQGGGSR-YIMGSGETFLEVQQRLLKEREIKIKYALEKVKKKRNLLRTQR 300
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGR 345
RR R ++++GYTN+GK+TL+ AL+ D L +LFATLD + +LP
Sbjct: 301 RR------REFPIISILGYTNSGKTTLIKALTGDEGLQPRDQLFATLDVTSHAGLLPCHM 354
Query: 346 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 405
V+ DT+GF+S LP L+++F ATLE+VV +DLL+HV D + P + + +VL VL+ +
Sbjct: 355 PVIYVDTIGFLSQLPHNLIESFSATLEDVVHSDLLIHVRDISHPETTKQKASVLSVLKNL 414
Query: 406 GVSEEKLKNMIEVWNKIDYHD 426
G+ ++ L MIEV NKID D
Sbjct: 415 GLPQQLLDTMIEVQNKIDLID 435
>gi|156502317|ref|YP_001428382.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|156252920|gb|ABU61426.1| putative GTPase [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 403
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 182/312 (58%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 11 VVLQGLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 66
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 67 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 113
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 114 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 168
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P +++ SD
Sbjct: 169 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEIIFSD 223
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 224 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 281
Query: 412 LKNMIEVWNKID 423
K I V+NKID
Sbjct: 282 -KETICVYNKID 292
>gi|312144164|ref|YP_003995610.1| GTP-binding proten HflX [Halanaerobium hydrogeniformans]
gi|311904815|gb|ADQ15256.1| GTP-binding proten HflX [Halanaerobium hydrogeniformans]
Length = 410
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 187/313 (59%), Gaps = 35/313 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G V IK N AES +++ I + LS +QQRNLE G V+DR +I++IF
Sbjct: 51 YVGKGKVNEIK---NTAES-TDINLIVFDNELSPVQQRNLEDYIGIKVIDRSQVILDIFA 106
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HAH+KE+K+Q ELA L Y RL R+RG ++ R +GG G G
Sbjct: 107 RHAHSKESKIQVELAQLEY---RLPRLRGRGIEMS--------------RLAGGIG-TRG 148
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L++ RRRI ++ L ++++++ +R VQR+ R+ A+VGYTNA
Sbjct: 149 PGESKLEVDRRRIEKKIHRLKEKLKDIKSSRDVQRSQRKD---------PLAALVGYTNA 199
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKST+++ LS ++ +LFATLD ++ + LP GR ++LSDTVGFIS LP QL +F
Sbjct: 200 GKSTIMNLLSGANSHVADQLFATLDSTMRQLELPVGRTIILSDTVGFISKLPHQLFASFR 259
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE- 427
TLEE+ AD+++HV+D + P +E++ V + L+ + S+ K I+++NKID +
Sbjct: 260 TTLEEIENADIILHVIDSSDPKMEKNIKVVEEELENLNSSKSK---RIKIFNKIDLLKQS 316
Query: 428 EMGDVEYIDGDDI 440
E+ D++ I D I
Sbjct: 317 EINDLKLIYPDAI 329
>gi|227530101|ref|ZP_03960150.1| GTP-binding protein HflX [Lactobacillus vaginalis ATCC 49540]
gi|227349983|gb|EEJ40274.1| GTP-binding protein HflX [Lactobacillus vaginalis ATCC 49540]
Length = 424
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 180/322 (55%), Gaps = 43/322 (13%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G V+ IK + AE+ + + N L+ Q RNLE G VLDR LI+EIF
Sbjct: 55 TYFGSGKVDEIKEAV-LAEN---VSTVITNDELTPSQLRNLEDELGCRVLDRTALILEIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y RL R++ + +TG GG GF +
Sbjct: 111 AERAQSKEAKLQVQIAELQY---RLPRLQTSANQRLDQQTG------------GGSGFTN 155
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G+GET+L++ RR I SHL ++ + R+ V+R R D + T A+VGYT
Sbjct: 156 RGSGETKLEMNRRTIQNSISHLRKELRVIDRSEEVKRKQR------DKSAIPTAALVGYT 209
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
NAGKST+++ L D +F LFATLD ++ + LP ++ LLSDTVGF+S L
Sbjct: 210 NAGKSTIMNGLVEKYGAGEDKTVFEKDMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKL 269
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P LV++F +TL E ADLL+ V+D + P+ E+ T + L+Q+G+ E + M+ V+
Sbjct: 270 PTHLVESFKSTLAEAANADLLIQVIDASDPHYEDMMKTTQETLKQIGI--ENIP-MLYVF 326
Query: 420 NKIDYHDEEMGDVEY--IDGDD 439
NK D D+EY ++GDD
Sbjct: 327 NKAD-----KTDMEYPVLEGDD 343
>gi|268318261|ref|YP_003291980.1| GTP-binding proten HflX [Rhodothermus marinus DSM 4252]
gi|262335795|gb|ACY49592.1| GTP-binding proten HflX [Rhodothermus marinus DSM 4252]
Length = 442
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 173/301 (57%), Gaps = 33/301 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
+ A T+ G G VE +K + +S D + + LS Q RNLERA G +LDR GL
Sbjct: 55 RVHAATYVGRGKVEELKRLVAARKS----DLVIFDDDLSPAQMRNLERALGCKLLDRTGL 110
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A T AK Q ELA L Y ++RL R + R GG
Sbjct: 111 ILDIFARRARTAVAKTQVELAQLEYMRTRLTRQ-----------------WTHLSRQKGG 153
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G G GET+++ RR I R + L ++E + R R QR R+R+ V++
Sbjct: 154 IG-TKGPGETQIETDRRLIARRIAVLRERLERIDRQRTTQRKKRQRY--------TRVSL 204
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL++ L+ +++ ++ RLFATLD + V L G+ VLLSDTVGFI LP +
Sbjct: 205 VGYTNAGKSTLMNVLAGTNVLAEDRLFATLDATTRLVHLEPGKPVLLSDTVGFIRKLPHR 264
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
L+++F +TL+EV E+D+L+H++D T P E+H V + L ++G ++ K M+ V+NKI
Sbjct: 265 LIESFKSTLDEVRESDVLLHLVDATHPRFEDHIQVVHETLAELGAAD---KPMLLVFNKI 321
Query: 423 D 423
D
Sbjct: 322 D 322
>gi|365925380|ref|ZP_09448143.1| GTP-binding protein [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420265927|ref|ZP_14768441.1| GTP-binding protein [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394426881|gb|EJE99666.1| GTP-binding protein [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 417
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/343 (40%), Positives = 194/343 (56%), Gaps = 48/343 (13%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFV--NAILSGIQQRNLERAWGKPVLDRV 180
K + T+ G G V I AE DA F+ N LS Q RNLE+ G VLDR
Sbjct: 44 KPVSATYLGKGKVSEI------AEIARATDAQFIILNDELSPTQIRNLEKDTGIAVLDRT 97
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
LI+EIF+ A +KEA++Q E+A L YK RL RV PD +L + SA G +
Sbjct: 98 ELILEIFSNRARSKEAQIQVEIARLKYKMPRL-RV-APDIKL--------DQQSASGALA 147
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GAGET+L+L RR + R S L +++E+ + ++ +RR+ L +V
Sbjct: 148 N-----RGAGETKLELNRRTLQNRISFLSRELKEIDKEFEIKSKSRRKSN------LPSV 196
Query: 301 AVVGYTNAGKST----LVSALSDSD---LFSDARLFATLDPRLKSVVLPSGRKVLLSDTV 353
A+VGYTNAGKST L+S S+ + +F LFATLD ++++ P +K LLSDTV
Sbjct: 197 ALVGYTNAGKSTTMNGLLSLFSEEETKQVFEKDMLFATLDTSVRNLSFPDNKKFLLSDTV 256
Query: 354 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 413
GFIS LP LV+AF +TL EV EADLL+ V+D + P+ +E T Q L+++GVS +K
Sbjct: 257 GFISKLPHNLVEAFKSTLAEVREADLLIQVIDISDPHSKEMIATTNQTLEELGVSNKK-- 314
Query: 414 NMIEVWNKIDYHDEEMGDVEY--IDGDDISNFSRAEDKDTTSE 454
MI +NK D +VEY I+G +I+ A+DK + E
Sbjct: 315 -MIYAYNKAD-----KAEVEYPTIEGMNIT--YSAQDKASLEE 349
>gi|291562499|emb|CBL41315.1| GTP-binding protein HflX [butyrate-producing bacterium SS3/4]
Length = 417
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 172/299 (57%), Gaps = 31/299 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G ++ +K + + + G + + LS Q +NLE A V+DR +I++IF
Sbjct: 60 TYLGKGKIQELKEMVWESGATG----VVCDDELSPAQLKNLEDALDTKVMDRTMIILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A A T+E K+Q ELA L Y+ RLV +R RL G
Sbjct: 116 AARAKTREGKIQVELAQLRYRAVRLVGLRNSLSRLGGGIGTRG----------------- 158
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L++ RRRI ER S L S++++V R R V R R + G T A+VGYTN
Sbjct: 159 -PGETKLEVDRRRIHERISQLKSELQDVERHRDVVRKQREQSGT------LTAAIVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL++ L+ + + ++ +LFATLDP +++ LP G KVLL+DTVGFI LP LV+AF
Sbjct: 212 AGKSTLLNKLTGAGILAEDKLFATLDPTTRALTLPGGEKVLLTDTVGFIRKLPHHLVEAF 271
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
+TLEE D+++HV+DC+ P ++ V + L+++ + + K +I V+NK+D D
Sbjct: 272 KSTLEEARYCDVILHVVDCSNPQMDMQMHVVYETLRRLDIKD---KEIITVFNKVDRPD 327
>gi|218129169|ref|ZP_03457973.1| hypothetical protein BACEGG_00744 [Bacteroides eggerthii DSM 20697]
gi|317475145|ref|ZP_07934412.1| GTP-binding protein HflX [Bacteroides eggerthii 1_2_48FAA]
gi|217988547|gb|EEC54867.1| GTP-binding protein HflX [Bacteroides eggerthii DSM 20697]
gi|316908598|gb|EFV30285.1| GTP-binding protein HflX [Bacteroides eggerthii 1_2_48FAA]
Length = 418
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 184/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELEFLAETAGAEVVKRFTQKLDQANSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R L VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------LIRVALVGYTNVGKSTLMTLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVII-ENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G S K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLADIGASG---KPMILVFNKIDAY 339
>gi|423088531|ref|ZP_17076910.1| GTP-binding protein HflX [Clostridium difficile 70-100-2010]
gi|357559417|gb|EHJ40865.1| GTP-binding protein HflX [Clostridium difficile 70-100-2010]
Length = 425
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 176/311 (56%), Gaps = 38/311 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE I +N + + IF N LS Q +NLE ++DR LI++IF
Sbjct: 55 YIGTGKVEEI---LNLIKKENIEIVIFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ ELA+L Y RL+ G + L GR SGG G +
Sbjct: 111 QRAKTREAKLQVELASLKYMLPRLI---GSNENL--------------GRQSGGVGTKNR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++++++ R QR+ RR+ L VA+VGYTN
Sbjct: 154 GSGEKKLELDRRRIEEKITSLNRELDDLKFQRETQRSMRRKSN------LPNVALVGYTN 207
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKS++++ L D +F LFATL+ ++++VL + ++ LLSDTVGF+S+LP
Sbjct: 208 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLANNKEFLLSDTVGFVSNLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 268 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLKQIGADGIP---MIHVYN 324
Query: 421 KIDYHDEEMGD 431
KID D E+ D
Sbjct: 325 KIDLIDVEVLD 335
>gi|227544339|ref|ZP_03974388.1| GTP-binding protein HflX [Lactobacillus reuteri CF48-3A]
gi|338203148|ref|YP_004649293.1| GTP-binding protein HflX [Lactobacillus reuteri SD2112]
gi|227185681|gb|EEI65752.1| GTP-binding protein HflX [Lactobacillus reuteri CF48-3A]
gi|336448388|gb|AEI57003.1| GTP-binding protein HflX [Lactobacillus reuteri SD2112]
Length = 425
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 197/387 (50%), Gaps = 50/387 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE I+ + I N LS Q RNLE G +LDR LI+EIF
Sbjct: 56 TYFGKGKVEEIR----DVADANHVPTIITNDELSPSQLRNLEEGTGCRILDRTALILEIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ ++A L Y+ RL +T +E + + GG GF +
Sbjct: 112 ATRAQTKEAKLQVQIAELQYRLPRL-------------QTSASERLDQQT--GGGSGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I + SHL ++ + ++ +R R + + T A+VGYT
Sbjct: 157 RGAGETKLEMDRRTIQHQISHLRQELAAIAKSEQTKRKQRVK------SAIPTAALVGYT 210
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
NAGKST+++ L + +F LFATLD ++ + LP ++ LLSDTVGF+S L
Sbjct: 211 NAGKSTIMNGLVRKYGAAEEKTVFEKNMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKL 270
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P LV++F +TL E ADLL+ V+D + P+ +E T + L+Q+G+++ MI V+
Sbjct: 271 PTHLVESFKSTLAEAANADLLIQVIDYSDPHYKEMMETTNETLKQIGINDIP---MINVF 327
Query: 420 NKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN-------N 472
NK D + E +E GDD S +D S + V+ I + D
Sbjct: 328 NKADKTEIEFPILE---GDDQVVISAKQD---ASLDLLVDVIKKHLFKDYVTTTLLIPFT 381
Query: 473 DGFVSEDLGESMNKNHNDY-SDGWLLS 498
DG V L E N Y SDG LL+
Sbjct: 382 DGHVVSYLNEHTNILDTTYESDGTLLT 408
>gi|90962408|ref|YP_536324.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|301300241|ref|ZP_07206453.1| GTP-binding protein HflX [Lactobacillus salivarius ACS-116-V-Col5a]
gi|90821602|gb|ABE00241.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|300852182|gb|EFK79854.1| GTP-binding protein HflX [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 419
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 172/306 (56%), Gaps = 34/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G E I+ H+ ++D + VNA L+ Q RNLE G V+DR LI+E
Sbjct: 47 AATYFGKGKAEEIR-HVGEI---NDIDTLIVNAELTPTQLRNLEDITGLQVIDRTALILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ ++A L Y+ RL T + + G+ G G+
Sbjct: 103 IFASRAQTKEAKLQVQIAKLQYQLPRL-------------RTSSINRMDQQTAGNTGGGY 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L+L +R I +R S+L +++E+ QR AR R + TVA+VG
Sbjct: 150 TNRGSGETKLELNKRVIEKRISNLSKELKEIESVHENQRRARERSS------IKTVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTNAGKST ++ L ++ ++F LFATLD ++ + LP ++ LSDTVGF+S
Sbjct: 204 YTNAGKSTTMNGLLKLLEQPTNKEVFEKDMLFATLDTSIRKIKLPDNKEFFLSDTVGFVS 263
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
DLP QLV AF TL E +ADLL+ V+D + + ++ T Q L ++GV + MI
Sbjct: 264 DLPHQLVKAFRTTLSEANQADLLIQVIDGSDEHAKDMIETTKQTLDEIGVKDIP---MIY 320
Query: 418 VWNKID 423
+NK D
Sbjct: 321 AYNKSD 326
>gi|294508447|ref|YP_003572505.1| GTP-binding protein hflX [Salinibacter ruber M8]
gi|294344775|emb|CBH25553.1| GTP-binding protein hflX [Salinibacter ruber M8]
Length = 455
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 171/296 (57%), Gaps = 33/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G V+ + +S D + + LS +Q +N+E+ +LDR GLI++IF
Sbjct: 62 TFIGSGKVKELARLTKERDS----DLVIFDDELSPVQVKNIEKKIDCKLLDRTGLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T+ AK Q ELA L Y +SRL R R T R GG G
Sbjct: 118 ASRAQTRAAKTQVELAQLGYLRSRLTR------RWTH-----------LSRQEGGIG-TK 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE ++++ RR I +R + L +++E+ R R QR R G T ++VGYTN
Sbjct: 160 GPGEKQIEMDRRIIDKRMAKLREKLDEIDRQRTTQRKGRE--------GYTTASLVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL++AL+D DL ++ RLFATLD ++V L S ++VL+SDTVGFI LP +L+++F
Sbjct: 212 AGKSTLLNALADEDLEAEDRLFATLDATTRTVELDSNKEVLMSDTVGFIRKLPHRLIESF 271
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+EV E+D+L+HV+D T PN EE V + L G E + K + V+NKID
Sbjct: 272 RSTLDEVRESDVLIHVVDVTHPNYEEQMRVVAETL---GELEARDKPTLVVFNKID 324
>gi|224009828|ref|XP_002293872.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970544|gb|EED88881.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 453
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 176/294 (59%), Gaps = 28/294 (9%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+ +A L+ QQ+ LE A+ + V+DR LI++IF HA T+E KLQ +LA Y+K RL
Sbjct: 72 VVFDAELTPGQQKALENAFNRKVVDRTALILDIFAQHAKTREGKLQVDLALHEYRKPRLT 131
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
R+ T E R GSGG G + G GET+L++ +R + +R L +I+
Sbjct: 132 RM------WTHLE---------RQSGSGGVG-LRGPGETQLEVDKRILRDRILVLKEKID 175
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLD 333
+V++ R + R R++ G L +A+VGYTNAGKSTL++ L+ + + ++ LFATLD
Sbjct: 176 DVQKQRDLHRRGRKKGG------LPVLALVGYTNAGKSTLLNCLTKAGILAENILFATLD 229
Query: 334 PRLKSVVLPSGR---KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
P + V LP + +VLL+DTVGFI LP QLV AF ATLEEV EAD+LVH++D + P
Sbjct: 230 PTTRRVKLPGYKTHPEVLLTDTVGFIQKLPTQLVAAFRATLEEVKEADVLVHIVDVSNPC 289
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFS 444
+ +V +VL ++G + K + V+NK+D D+E ++ + NFS
Sbjct: 290 WRKQEDSVTKVLSEIGAGD---KPTVRVFNKLDLLDKEDAELIKYEAACSENFS 340
>gi|312869660|ref|ZP_07729808.1| GTP-binding protein HflX [Lactobacillus oris PB013-T2-3]
gi|417885231|ref|ZP_12529386.1| GTP-binding protein HflX [Lactobacillus oris F0423]
gi|311094794|gb|EFQ53090.1| GTP-binding protein HflX [Lactobacillus oris PB013-T2-3]
gi|341595886|gb|EGS38523.1| GTP-binding protein HflX [Lactobacillus oris F0423]
Length = 424
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 172/320 (53%), Gaps = 39/320 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G V I + ++ I N LS Q RNLE GK +LDR LI+EIF
Sbjct: 56 TYFGKGKV----AEIAELAAANDVATIITNDELSPSQLRNLEDETGKRILDRTALILEIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ ++A L Y RL R++ + +TG GG GF +
Sbjct: 112 ATRAQTKEAKLQVQIAELQY---RLPRLQTSASQRLDQQTG------------GGSGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I + +HL ++ + ++ +R R + + T A+VGYT
Sbjct: 157 RGAGETKLEMDRRTIQHQITHLRHELAAIDKSEETKRKQRAKSN------IPTAALVGYT 210
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
NAGKST+++ L D +F LFATLD ++ + LP + LLSDTVGF+S L
Sbjct: 211 NAGKSTIMNGLVRRYGTVEDKTVFEKDMLFATLDTSVRRLTLPGKKDFLLSDTVGFVSKL 270
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P LV++F +TL E ADLL+ V+D + PN EE T + L+Q+G+ M+ V+
Sbjct: 271 PTNLVESFKSTLAEAANADLLIQVIDYSDPNYEEMMQTTKETLKQIGIDNIP---MVNVF 327
Query: 420 NKIDYHDEEMGDVEYIDGDD 439
NK D + E +E GDD
Sbjct: 328 NKADKTEIEFPVLE---GDD 344
>gi|345304556|ref|YP_004826458.1| GTP-binding proten HflX [Rhodothermus marinus SG0.5JP17-172]
gi|345113789|gb|AEN74621.1| GTP-binding proten HflX [Rhodothermus marinus SG0.5JP17-172]
Length = 442
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 173/301 (57%), Gaps = 33/301 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
+ A T+ G G VE +K + +S D + + LS Q RNLERA G +LDR GL
Sbjct: 55 RVHAATYVGRGKVEELKRLVVARKS----DLVIFDDDLSPAQMRNLERALGCKLLDRTGL 110
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A T AK Q ELA L Y ++RL R + R GG
Sbjct: 111 ILDIFARRARTAVAKTQVELAQLEYMRTRLTRQ-----------------WTHLSRQKGG 153
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G G GET+++ RR I R + L ++E + R R QR R+R+ V++
Sbjct: 154 IG-TKGPGETQIETDRRLIARRIAVLRERLERIDRQRTTQRKKRQRY--------TRVSL 204
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL++ L+ +++ ++ RLFATLD + V L G+ VLLSDTVGFI LP +
Sbjct: 205 VGYTNAGKSTLMNVLAGTNVLAEDRLFATLDATTRLVHLEPGKPVLLSDTVGFIRKLPHR 264
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
L+++F +TL+EV E+D+L+H++D T P E+H V + L ++G ++ K M+ V+NKI
Sbjct: 265 LIESFKSTLDEVRESDVLLHLVDATHPRFEDHIQVVHETLAELGAAD---KPMLLVFNKI 321
Query: 423 D 423
D
Sbjct: 322 D 322
>gi|259502374|ref|ZP_05745276.1| GTP-binding protein HflX [Lactobacillus antri DSM 16041]
gi|259169636|gb|EEW54131.1| GTP-binding protein HflX [Lactobacillus antri DSM 16041]
Length = 424
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 176/330 (53%), Gaps = 39/330 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G V I + ++ I N LS Q RNLE GK +LDR LI+EIF
Sbjct: 56 TYFGKGKV----AEIAELAAANDVTTIITNDELSPSQLRNLEDETGKRILDRTALILEIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ ++A L Y RL R++ + +TG GG GF +
Sbjct: 112 ATRAQTKEAKLQVQIAELQY---RLPRLQTSASQRLDQQTG------------GGSGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I +HL ++ + ++ +R R + + T A+VGYT
Sbjct: 157 RGAGETKLEMDRRTIQHHITHLRHELAAIDKSEETKRKQRAKSN------IPTAALVGYT 210
Query: 307 NAGKSTLVS-------ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
NAGKST+++ A+ D +F LFATLD ++ + LP + LLSDTVGF+S L
Sbjct: 211 NAGKSTIMNGLVRRYGAVEDKTVFEKDMLFATLDTSVRRLTLPGRKDFLLSDTVGFVSKL 270
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P LV++F +TL E ADLL+ V+D + PN EE T + L+Q+G+ M+ V+
Sbjct: 271 PTNLVESFKSTLAEAANADLLIQVIDYSDPNYEEMMQTTKETLKQIGIDNIP---MVNVF 327
Query: 420 NKIDYHDEEMGDVEYIDGDDISNFSRAEDK 449
NK D + E +E GDD S +D+
Sbjct: 328 NKADKTEIEFPVLE---GDDQVVISAKQDE 354
>gi|417787540|ref|ZP_12435223.1| GTP-binding protein-like HflX [Lactobacillus salivarius NIAS840]
gi|334307717|gb|EGL98703.1| GTP-binding protein-like HflX [Lactobacillus salivarius NIAS840]
Length = 419
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 172/306 (56%), Gaps = 34/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G E I+ H+ ++D + VNA L+ Q RNLE G V+DR LI+E
Sbjct: 47 AATYFGKGKAEEIR-HVGEI---NDIDTLIVNAELTPTQLRNLEDITGLQVIDRTALILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ ++A L Y+ RL T + + G+ G G+
Sbjct: 103 IFASRAQTKEAKLQVQIAKLQYQLPRL-------------RTSSINRMDQQTAGNTGGGY 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L+L +R I +R S+L +++E+ QR AR R + TVA+VG
Sbjct: 150 TNRGSGETKLELNKRVIEKRISNLSKELKEIESVHENQRRARERSS------IKTVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTNAGKST ++ L ++ ++F LFATLD ++ + LP ++ LSDTVGF+S
Sbjct: 204 YTNAGKSTTMNGLLKLLEQPTNKEVFEKDMLFATLDTSIRKIKLPDNKEFFLSDTVGFVS 263
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
DLP QLV AF TL E +ADLL+ V+D + + ++ T Q L ++GV + MI
Sbjct: 264 DLPHQLVKAFRTTLSEANQADLLIQVIDGSDEHAKDMIETTKQTLDEIGVKDIP---MIY 320
Query: 418 VWNKID 423
+NK D
Sbjct: 321 AYNKSD 326
>gi|339497356|ref|ZP_08658332.1| GTP-binding protein HflX [Leuconostoc pseudomesenteroides KCTC
3652]
Length = 426
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 176/311 (56%), Gaps = 45/311 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE I+ A + ++D I N L+ Q RNLE+A V+DR GLI++IF
Sbjct: 53 TYFGKGKVE----EISAAVTTYDVDMIVANDELTPSQIRNLEKATNATVVDRTGLILDIF 108
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TK A+LQ +LA L Y+ RL R + T + + G+GG GF S
Sbjct: 109 AQRAQTKVAQLQVQLARLQYQLPRL--------RTSMSITLDQQT------GAGGGGFTS 154
Query: 248 -GAGETELQLQRRRILERRSHL---LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
GAGET+L+ RRRI + H+ L+ +E+ TR+ QR L VA+V
Sbjct: 155 RGAGETKLEQSRRRITAQMVHIRQELADLEKGETTRSAQR---------QNNDLPNVALV 205
Query: 304 GYTNAGKSTLVSAL--------SDSD---LFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
GYTNAGKSTL++ L S+ D +F LFATL+ ++ + LP ++ LLSDT
Sbjct: 206 GYTNAGKSTLMNRLLARFGIGASNDDSKQVFEKDMLFATLNTTVRQLTLPDKKQFLLSDT 265
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+S LP LV AF +TL+E ADLL+HV+D + P+ ++ TT + LQ++GVS
Sbjct: 266 VGFVSKLPHSLVAAFKSTLQEAASADLLLHVVDVSDPHYQDMMTTTNKTLQEIGVSG--- 322
Query: 413 KNMIEVWNKID 423
+ I V+NK D
Sbjct: 323 RPTITVYNKAD 333
>gi|270290754|ref|ZP_06196978.1| GTP-binding protein HflX [Pediococcus acidilactici 7_4]
gi|418068640|ref|ZP_12705922.1| GTPase [Pediococcus acidilactici MA18/5M]
gi|270280814|gb|EFA26648.1| GTP-binding protein HflX [Pediococcus acidilactici 7_4]
gi|357539376|gb|EHJ23395.1| GTPase [Pediococcus acidilactici MA18/5M]
Length = 430
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 172/306 (56%), Gaps = 34/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G +E + + A E++ + VN L+ Q NLE+ V+DR GLI+E
Sbjct: 53 AATYFGKGKIEEL-TQVAAAR---EVETLVVNDELTPSQLSNLEKETQLRVIDRTGLILE 108
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A +KEA+LQ ELA L Y+ RL T + + + G+ G GF
Sbjct: 109 IFANRARSKEARLQVELAKLQYQLPRL-------------RTSATQRLDQQTAGNTGGGF 155
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ GAGET+L+L RR I R +H+ +++E+ + VQR R D + + +VA+VG
Sbjct: 156 TNRGAGETKLELNRRTIRNRINHINQELKEMSTSANVQRQRR------DKKDIPSVALVG 209
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTN GKST ++ L D +F LFATLD ++ + P ++++LSDTVGF+S
Sbjct: 210 YTNTGKSTTMNGLISMYGRNEDKQVFEKDMLFATLDTSVRKLTFPDQKELILSDTVGFVS 269
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
+LP QLV AF +TL E +ADLLV V+D + P+ E T LQ++GV++ MI
Sbjct: 270 NLPHQLVKAFRSTLSEAAKADLLVQVVDVSDPHYREMMQTTADTLQEIGVTDVP---MIY 326
Query: 418 VWNKID 423
+NK D
Sbjct: 327 AFNKAD 332
>gi|302339575|ref|YP_003804781.1| GTP-binding proten HflX [Spirochaeta smaragdinae DSM 11293]
gi|301636760|gb|ADK82187.1| GTP-binding proten HflX [Spirochaeta smaragdinae DSM 11293]
Length = 429
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 169/301 (56%), Gaps = 35/301 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
G G E I A+S ELDA I ++ L+ QQRN ER G V+DR +I+EI
Sbjct: 68 LLGSGKSEEI------ADSADELDAGVIIIDDDLTPRQQRNWERLSGCVVIDRQEVILEI 121
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A T+EA LQ LA + Y RL R A +R RG G RG
Sbjct: 122 FADRAATREASLQVALARMEYSLPRLTR---------------AWTHLSRQRG-GSRG-T 164
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+L+ RR +L + + L ++E VRR RA R RR L TVA+VGYT
Sbjct: 165 RGEGETQLESDRRIVLAKVAKLKKELEGVRRQRATARKQRR------SVPLPTVALVGYT 218
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
NAGKS+L++AL+ S + ++ +LFATLDP + + L GR VLL+DTVGFI LP LVDA
Sbjct: 219 NAGKSSLLNALAGSAVNAEDKLFATLDPTTRRLELSGGRSVLLTDTVGFIRKLPHALVDA 278
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY-H 425
F ATLEE + ADLL+HV+D + P EH T QVL ++G + I V NK D H
Sbjct: 279 FRATLEETLLADLLIHVIDASDPEAVEHYRTTRQVLSEIGAED---TEQIIVLNKADLPH 335
Query: 426 D 426
D
Sbjct: 336 D 336
>gi|330999637|ref|ZP_08323346.1| GTP-binding protein HflX [Parasutterella excrementihominis YIT
11859]
gi|329574143|gb|EGG55719.1| GTP-binding protein HflX [Parasutterella excrementihominis YIT
11859]
Length = 387
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 171/298 (57%), Gaps = 34/298 (11%)
Query: 128 TFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
TF G G +E IK NGA+ A+ + LS QQRN+E+A G VLDR LI+E
Sbjct: 60 TFLGSGKIEEIKSEALANGAK------ALIFDVALSPAQQRNIEKAVGIEVLDRTNLILE 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T+E +LQ ELA L + +RLVR G + RG G
Sbjct: 114 IFRQRAKTREGRLQVELARLTHLSTRLVR-------------GWTHLERQRG----GLSK 156
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GE +++L RR I R L Q++++ R R QR +R+R + TVA+VGY
Sbjct: 157 TGGPGEKQIELDRRMIATRVKALREQLKKLERQRNTQRKSRQRGE------VLTVALVGY 210
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ +++ +LFATLD + + +V+LSDTVGFI LP QL++
Sbjct: 211 TNAGKSTLFNRLTRGGVYAADQLFATLDTTARRCFVGGDVEVVLSDTVGFIRGLPHQLIE 270
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF +TL+E +ADLL+HV+D + P EE T V +VL+++G + + ++ V+NKID
Sbjct: 271 AFKSTLDEAAQADLLLHVVDSSTPAREEQMTEVNKVLEEIGAKD--IPQLL-VFNKID 325
>gi|83814057|ref|YP_446511.1| GTPase [Salinibacter ruber DSM 13855]
gi|83755451|gb|ABC43564.1| GTPase of unknown function subfamily, putative [Salinibacter ruber
DSM 13855]
Length = 427
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 171/296 (57%), Gaps = 33/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G V+ + +S D + + LS +Q +N+E+ +LDR GLI++IF
Sbjct: 34 TFIGSGKVKELARLTKERDS----DLVISDDELSPVQVKNIEKKIDCKLLDRTGLILDIF 89
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T+ AK Q ELA L Y +SRL R R T R GG G
Sbjct: 90 ASRAQTRAAKTQVELAQLGYLRSRLTR------RWTH-----------LSRQEGGIG-TK 131
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE ++++ RR I +R + L +++E+ R R QR R G T ++VGYTN
Sbjct: 132 GPGEKQIEMDRRIIDKRMAKLREKLDEIDRQRTTQRKGRE--------GYTTASLVGYTN 183
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL++AL+D DL ++ RLFATLD ++V L S ++VL+SDTVGFI LP +L+++F
Sbjct: 184 AGKSTLLNALADEDLEAEDRLFATLDATTRTVELDSNKEVLMSDTVGFIRKLPHRLIESF 243
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+EV E+D+L+HV+D T PN EE V + L G E + K + V+NKID
Sbjct: 244 RSTLDEVRESDVLIHVVDVTHPNYEEQMRVVAETL---GELEARDKPTLVVFNKID 296
>gi|46447400|ref|YP_008765.1| hypothetical protein pc1766 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401041|emb|CAF24490.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 444
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 174/299 (58%), Gaps = 26/299 (8%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+ G +E + I A +D I + ++ QQRNL+ A+ KPV+DR LI+
Sbjct: 70 ASTYVSKGKLEEL---IQIANELA-VDLIIFDDEITPAQQRNLQAAFNKPVIDRTELILG 125
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
+F AHTKEA+LQ ELA + Y+ RL R+ R GG +
Sbjct: 126 VFAQRAHTKEARLQIELAKIKYEAPRLKRLWTHLSR-----------QQGTSGSGGGGAY 174
Query: 246 ISGAGETELQLQRRRILERRSHLL-SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GE ++++ +R IL+R+ +L +I++V+ R QR +R R + A++G
Sbjct: 175 LKGEGEKQIEIDKR-ILKRKMDVLQKEIDDVKAVRETQRLSRVR------SAIPVFAIIG 227
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKSTL++AL+D+ +F + +LFATLD + LP+ + +L+ DTVGFI LP LV
Sbjct: 228 YTNAGKSTLLNALTDAGVFVEDKLFATLDTTTRKFTLPNNQDILIVDTVGFIRKLPHLLV 287
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF +TLEE +EAD+L+H++D + P EE T +VLQ++G + K +I V NKID
Sbjct: 288 AAFKSTLEEAIEADILLHLIDVSHPMAEEQAATTYEVLQELGAGK---KPIITVLNKID 343
>gi|409099868|ref|ZP_11219892.1| GTP-binding protein HflX [Pedobacter agri PB92]
Length = 396
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 170/298 (57%), Gaps = 34/298 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E IK ++ E +D + + LS Q RN++R G VLDR LI++IF
Sbjct: 64 TFVGTGKLEEIKAYVKSEE----IDTVVFDDELSPSQLRNIDRELGVKVLDRSNLILDIF 119
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T +AK Q ELA L Y RL G T E R GG G +
Sbjct: 120 ASRAQTAQAKTQVELAQLQYVLPRLT------GMWTHLE-----------RQKGGIG-MR 161
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR IL + S L ++ + R QR R + L VA+VGYTN
Sbjct: 162 GPGETQIESDRRIILNKISLLKERLRNIDRQNETQRKNRGQ--------LIRVALVGYTN 213
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKST+++ LS S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP LV+ F
Sbjct: 214 VGKSTIMNMLSKSEVFAENKLFATLDTTVRKVVIEN-LPFLLSDTVGFIRKLPHHLVECF 272
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
+TL+EV EADLL+HV+D + PN E+ TV + L+ +G + K+MI V+NKID +
Sbjct: 273 KSTLDEVREADLLIHVVDVSHPNFEDQINTVNETLKDIGAID---KDMILVFNKIDAY 327
>gi|291231737|ref|XP_002735823.1| PREDICTED: pseudoautosomal GTP-binding protein-like protein-like
[Saccoglossus kowalevskii]
Length = 535
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 175/296 (59%), Gaps = 28/296 (9%)
Query: 130 FGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
FG G + N +S + A+F++ +L+G+Q + LE AWG V DR +++ IF
Sbjct: 162 FGKGNFAMLT---NLIKSMSSVTAVFMSVEMLTGLQHKLLEEAWGVHVYDRYTIVLNIFK 218
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA TKEAKLQ LA + Y +SRL RG +VS + SG + +I G
Sbjct: 219 EHAVTKEAKLQIALAEIPYLRSRL---RG--------------MVSNMDQQSGAQQYIGG 261
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET L++QRR + ER + ++ ++++ R + R R++ + T++VVGYTN+
Sbjct: 262 GGETLLEVQRRMLDEREMKIKKRLSKLKKRRELLRTIRKK------KQFPTISVVGYTNS 315
Query: 309 GKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GK+TL+ +L+ D DL +LFATLD L + V+ DTVGFIS LP L+DAF
Sbjct: 316 GKTTLIKSLTGDLDLCPQDKLFATLDITSHVGQLTNRMNVIYVDTVGFISALPHNLIDAF 375
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLE+V+ +DL++H+ D + P+ + VL+VLQ++GV +E NMIEV NKID
Sbjct: 376 SATLEDVMLSDLIIHIRDVSHPDTVAQKDNVLRVLQEMGVPDELTNNMIEVCNKID 431
>gi|427441526|ref|ZP_18925325.1| GTP-binding protein HflX [Pediococcus lolii NGRI 0510Q]
gi|425787048|dbj|GAC46113.1| GTP-binding protein HflX [Pediococcus lolii NGRI 0510Q]
Length = 430
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 171/306 (55%), Gaps = 34/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G +E + + E++ + VN L+ Q NLE+ V+DR GLI+E
Sbjct: 53 AATYFGKGKIE----ELTQVAAAREVETLVVNDELTPSQLSNLEKETQLRVIDRTGLILE 108
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A +KEA+LQ ELA L Y+ RL T + + + G+ G GF
Sbjct: 109 IFANRARSKEARLQVELAKLQYQLPRL-------------RTSATQRLDQQTAGNTGGGF 155
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ GAGET+L+L RR I R +H+ +++E+ + VQR R D + + +VA+VG
Sbjct: 156 TNRGAGETKLELNRRTIRNRINHINQELKEMSTSANVQRQRR------DKKDIPSVALVG 209
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTN GKST ++ L D +F LFATLD ++ + P ++++LSDTVGF+S
Sbjct: 210 YTNTGKSTTMNGLISMYGRNEDKQVFEKDMLFATLDTSVRKLTFPDQKELILSDTVGFVS 269
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
+LP QLV AF +TL E +ADLLV V+D + P+ E T LQ++GV++ MI
Sbjct: 270 NLPHQLVKAFRSTLSEAAKADLLVQVVDVSDPHYREMMQTTADTLQEIGVTDVP---MIY 326
Query: 418 VWNKID 423
+NK D
Sbjct: 327 AFNKAD 332
>gi|418960950|ref|ZP_13512837.1| GTP-binding protein [Lactobacillus salivarius SMXD51]
gi|380344617|gb|EIA32963.1| GTP-binding protein [Lactobacillus salivarius SMXD51]
Length = 419
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 172/306 (56%), Gaps = 34/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G E I+ H+ + +D + VNA L+ Q RNLE G V+DR LI+E
Sbjct: 47 AATYFGKGKAEEIR-HVGEINN---IDTLIVNAELTPTQLRNLEDITGLQVIDRTALILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ ++A L Y+ RL T + + G+ G G+
Sbjct: 103 IFASRAQTKEAKLQVQIAKLQYQLPRL-------------RTSSINRMDQQTAGNTGGGY 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L+L +R I +R S+L +++E+ QR AR R + TVA+VG
Sbjct: 150 TNRGSGETKLELNKRVIEKRISNLSKELKEIENVHENQRRARERSS------IKTVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTNAGKST ++ L ++ ++F LFATLD ++ + LP ++ LSDTVGF+S
Sbjct: 204 YTNAGKSTTMNGLLKLLEQPTNKEVFEKDMLFATLDTSIRKIKLPDNKEFFLSDTVGFVS 263
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
DLP QLV AF TL E +ADLL+ V+D + + ++ T Q L ++GV + MI
Sbjct: 264 DLPHQLVKAFRTTLSEANQADLLIQVIDGSDEHAKDMIETTKQTLDEIGVKDIP---MIY 320
Query: 418 VWNKID 423
+NK D
Sbjct: 321 AYNKSD 326
>gi|225026796|ref|ZP_03715988.1| hypothetical protein EUBHAL_01048 [Eubacterium hallii DSM 3353]
gi|224955915|gb|EEG37124.1| GTP-binding protein HflX [Eubacterium hallii DSM 3353]
Length = 432
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/309 (40%), Positives = 171/309 (55%), Gaps = 43/309 (13%)
Query: 128 TFFGPGTVETIKC--HINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
+ G G VE IK H+ GAE I + LS +Q RNL+ +PV DR LI++
Sbjct: 53 VYVGTGRVEEIKAVAHMMGAE------VIIFDNTLSPMQLRNLKDIIERPVFDRTHLILQ 106
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF++ A T+EA++Q E A L Y+ RL TG E++S +G GSGG
Sbjct: 107 IFSSRARTREAQIQVETARLQYELPRL--------------TGMGEILSRQGGGSGGLSN 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GAGE +L+L +R+I R S L ++ EV + R QR R +G+ VA+VGY
Sbjct: 153 -KGAGEKKLELDKRKIRHRISELKKELREVEKNRETQRKRRLV------QGIPQVALVGY 205
Query: 306 TNAGKSTLVSAL-----------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVG 354
TNAGKSTL++A D + + LFATLD ++ + LP R+ LLSDTVG
Sbjct: 206 TNAGKSTLLNAFIDKYEENEEKKEDRKVMAKNMLFATLDTTVRKIHLPDKREFLLSDTVG 265
Query: 355 FISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN 414
FIS LP LV+AFH+TLEEV A+LL+ V+D + + +H Q L+++G E
Sbjct: 266 FISKLPHNLVEAFHSTLEEVKFANLLLEVVDYSDEHYMDHMEVTRQTLKELGADEIPC-- 323
Query: 415 MIEVWNKID 423
I V+NK D
Sbjct: 324 -IHVFNKCD 331
>gi|126699826|ref|YP_001088723.1| GTP-binding protein, HflX type [Clostridium difficile 630]
gi|115251263|emb|CAJ69094.1| putative GTP-binding protein, HflX type [Clostridium difficile 630]
Length = 425
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 176/311 (56%), Gaps = 38/311 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE I +N + + IF N LS Q +NLE ++DR LI++IF
Sbjct: 55 YIGTGKVEEI---LNLIKKENIEIVIFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RL+ G + L GR SGG G +
Sbjct: 111 QRAKTREAKLQVEVASLKYMLPRLI---GSNENL--------------GRQSGGVGTKNR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++++++ R QR+ RR+ L VA+VGYTN
Sbjct: 154 GSGEKKLELDRRRIEEKITSLNRELDDLKFQRETQRSMRRKSN------LPNVALVGYTN 207
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKS++++ L D +F LFATL+ ++++VL + ++ LLSDTVGF+S+LP
Sbjct: 208 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLANNKEFLLSDTVGFVSNLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 268 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLKQIGADGIP---MIHVYN 324
Query: 421 KIDYHDEEMGD 431
KID D E+ D
Sbjct: 325 KIDLIDVEVLD 335
>gi|417809707|ref|ZP_12456388.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
gi|335350631|gb|EGM52127.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
Length = 419
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 172/306 (56%), Gaps = 34/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G E I+ H+ + +D + VNA L+ Q RNLE G V+DR LI+E
Sbjct: 47 AATYFGKGKAEEIR-HVGEINN---IDTLIVNAELTPTQLRNLEDITGLQVIDRTALILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ ++A L Y+ RL T + + G+ G G+
Sbjct: 103 IFASRAQTKEAKLQVQIAKLQYQLPRL-------------RTSSINRMDQQTAGNTGGGY 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L+L +R I +R S+L +++E+ QR AR R + TVA+VG
Sbjct: 150 TNRGSGETKLELNKRVIEKRISNLSKELKEIENVHENQRRARERSS------IKTVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTNAGKST ++ L ++ ++F LFATLD ++ + LP ++ LSDTVGF+S
Sbjct: 204 YTNAGKSTTMNGLLKLLEQPTNKEVFEKDMLFATLDTSIRKIKLPDNKEFFLSDTVGFVS 263
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
DLP QLV AF TL E +ADLL+ V+D + + ++ T Q L ++GV + MI
Sbjct: 264 DLPHQLVKAFRTTLSEANQADLLIQVIDGSDEHAKDMIETTKQTLDEIGVKDIP---MIY 320
Query: 418 VWNKID 423
+NK D
Sbjct: 321 AYNKSD 326
>gi|167765041|ref|ZP_02437162.1| hypothetical protein BACSTE_03435 [Bacteroides stercoris ATCC
43183]
gi|167697710|gb|EDS14289.1| GTP-binding protein HflX [Bacteroides stercoris ATCC 43183]
Length = 419
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 183/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I E ++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLDQANSVTYVGKGKLEEIKEYIRSEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKD 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R L VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------LIRVALVGYTNVGKSTLMTLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVII-ENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G S K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLADIGASG---KPMILVFNKIDAY 339
>gi|395244510|ref|ZP_10421474.1| GTP-binding protein HflX [Lactobacillus hominis CRBIP 24.179]
gi|394483157|emb|CCI82482.1| GTP-binding protein HflX [Lactobacillus hominis CRBIP 24.179]
Length = 426
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 186/337 (55%), Gaps = 38/337 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G + IK G ++K A+ +N L+ Q RNLE V+DR LI+E
Sbjct: 54 AGTYFGVGKINQIKAMAQGLKAK----ALVINDELTPTQIRNLESMTKLKVVDRTELILE 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF+ A TK+AKLQ +LA L Y+ L R+ + L RGSG
Sbjct: 110 IFSNRAKTKQAKLQVQLARLQYE---LPRLHPSENSLDQQRGSGGASGGFANRGSG---- 162
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
ET+L+L RR I ++ S + +++E+ + V ++ARR + L VA+VGY
Sbjct: 163 -----ETKLELNRRTIGKQISAIKKELKEISKQEDV-KSARRNNSR-----LPQVALVGY 211
Query: 306 TNAGKSTLVSAL-----SDSD---LFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
TNAGKST ++ L DSD +F LFATLD ++ + LP R +LSDTVGFIS
Sbjct: 212 TNAGKSTTLNELLKVFSEDSDKKQVFEKNMLFATLDTSVRRIDLPDDRSFILSDTVGFIS 271
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP L+++F ATL+E +ADLLV+V+D + PN+ + T +VLQ++G++ MI
Sbjct: 272 KLPHNLIESFKATLQEAKQADLLVNVVDSSDPNMVQMTKTTQKVLQEIGITNVP---MIT 328
Query: 418 VWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSE 454
+NK D + + +E G+DI A+DKD+ E
Sbjct: 329 AYNKADLTERQFPQIE---GNDI--LYSAKDKDSIKE 360
>gi|160893538|ref|ZP_02074323.1| hypothetical protein CLOL250_01090 [Clostridium sp. L2-50]
gi|156864933|gb|EDO58364.1| GTP-binding protein HflX [Clostridium sp. L2-50]
Length = 437
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 176/313 (56%), Gaps = 29/313 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
+A +D + G G VE ++ + ++ G + + LS Q NL+ A V+DR +
Sbjct: 66 RATSDLYLGSGKVEELRSMVAMYDATG----VVCDDELSPAQLMNLQDALNIKVMDRTMV 121
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF AHA + E KLQ ELA L ++ +RLV +R RL G
Sbjct: 122 ILDIFAAHAGSYEGKLQVELAQLRFRATRLVGMRDSLSRLGGGIGTRGPG---------- 171
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
E +L++ RR I +R S L + + +V R QR R R G + V++
Sbjct: 172 --------EKKLEIDRRVIRDRISKLKADLRQVEGRRTEQRKQRNRTG------IPVVSI 217
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL++ L+ + + + +LFATLDP ++ VLP+G++VL +DTVGFI LP
Sbjct: 218 VGYTNAGKSTLLNKLTGAGVLEEDKLFATLDPATRNAVLPAGQQVLFTDTVGFIRKLPHH 277
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV+AF +TLEE +D+++HV+D + PN + + TV L+Q+ V EEK +I V+NKI
Sbjct: 278 LVEAFKSTLEEAKYSDVILHVVDASDPNWDRNMETVYATLRQLNVDEEKDHPIITVFNKI 337
Query: 423 DYHDEEMGDVEYI 435
D E GD+ I
Sbjct: 338 DKLPEG-GDISMI 349
>gi|385800483|ref|YP_005836887.1| GTP-binding proten HflX [Halanaerobium praevalens DSM 2228]
gi|309389847|gb|ADO77727.1| GTP-binding proten HflX [Halanaerobium praevalens DSM 2228]
Length = 409
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 180/295 (61%), Gaps = 34/295 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G V+ IK N AE+ +F N LS +QQRNLE V+DR +I++IF
Sbjct: 51 YIGSGKVKEIK---NAAETLQANLIVFDNE-LSPVQQRNLEDQIEIKVIDRSQVILDIFA 106
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HAH++E+K+Q ELA L Y RL R++G ++ R +GG G G
Sbjct: 107 LHAHSRESKIQVELAQLEY---RLPRLQGRGIEMS--------------RLAGGIG-TRG 148
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L++ RRRI E+ L ++E++ +R VQR+ R+ VA+VGYTNA
Sbjct: 149 PGESQLEVDRRRIEEKIHRLKESLKEIKASRKVQRSNRKD---------PMVAIVGYTNA 199
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++ L+ ++ ++ +LFATLD ++ LP G+ +++SDTVGFIS LP QL+ +F
Sbjct: 200 GKSTLINNLAAANSYTADKLFATLDSTMRKFELPVGQNIIISDTVGFISKLPHQLIASFR 259
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
TLEE+ ADL++H++D + ++E++ V Q ++++ S+ K +I+V+NKID
Sbjct: 260 TTLEEIENADLILHLIDASNSDIEKNIKIVNQEIRKLKKSKAK---VIKVFNKID 311
>gi|429728781|ref|ZP_19263485.1| GTP-binding protein HflX [Peptostreptococcus anaerobius VPI 4330]
gi|429147756|gb|EKX90778.1| GTP-binding protein HflX [Peptostreptococcus anaerobius VPI 4330]
Length = 437
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 176/306 (57%), Gaps = 43/306 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G +E IK + AES LDA I N LSG Q RN+E GK ++DR LI++
Sbjct: 70 TYLGSGKIEEIKIY---AES---LDATMIVFNDELSGAQIRNIEDIIGKKIIDRTTLILD 123
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A ++E KLQ ELA L Y RL R+ G G++ S G G G RG
Sbjct: 124 IFAQRALSREGKLQVELAQLKY---RLPRLYGMGGQM-----------SRTGAGIGTRG- 168
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +L+ +R IL R + + +++EV + R +QR+ R+++ + VA+VGY
Sbjct: 169 ---PGEQKLEKDKRHILNRAAAIRKELKEVVKHREIQRSQRQKNK------IPIVALVGY 219
Query: 306 TNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
TNAGKSTL++ L ++ +F LFATLD L+ +LP+ R+ LL DTVGF+S
Sbjct: 220 TNAGKSTLLNELIKTHPDYEAEKGVFVKDMLFATLDVTLRRALLPNKREFLLVDTVGFVS 279
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP L++AF +TLEEV ADL++HV+D T + + + T VL+ +G E K I
Sbjct: 280 KLPHDLIEAFKSTLEEVNYADLILHVIDATNESSDIQKHTTDSVLKDLGADE---KATIT 336
Query: 418 VWNKID 423
V+NKID
Sbjct: 337 VYNKID 342
>gi|421893711|ref|ZP_16324205.1| GTP-binding protein HflX [Pediococcus pentosaceus IE-3]
gi|385273533|emb|CCG89577.1| GTP-binding protein HflX [Pediococcus pentosaceus IE-3]
Length = 406
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 185/339 (54%), Gaps = 41/339 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + A T+FG G VE + I A E+D I +N LS Q NLE+
Sbjct: 21 VVDQVTQKLERPNAATYFGKGKVEDL-VQIATAL---EVDTIVLNDELSPSQLTNLEKET 76
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+DR GLI+EIF AH++EAKLQ ELA L Y+ RL T +
Sbjct: 77 NLHFIDRTGLILEIFANRAHSREAKLQVELAKLQYQLPRL-------------RTSSTQR 123
Query: 233 VSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+ + G+ G GF + G+GET+L+L RR I + +H+ +++E+ + +QR R
Sbjct: 124 LDQQTAGNTGGGFTNRGSGETKLELNRRTIRNKINHINKELKEMTTSSDIQRKQR----- 178
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSG 344
D + + +VA+VGYTN GKST ++ L D +F LFATLD ++ + P
Sbjct: 179 -DKKDIPSVALVGYTNTGKSTTMNGLVRMYGRNEDKQVFEKDMLFATLDTSVRKLTFPDQ 237
Query: 345 RKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 404
++++LSDTVGF+S LP QLV AF +TL E +ADLLV ++D + P+ E T L +
Sbjct: 238 KELVLSDTVGFVSHLPHQLVKAFRSTLAEAAKADLLVQIVDISDPHYREMMQTTEDTLNE 297
Query: 405 VGVSEEKLKNMIEVWNKIDYHDEEMGDVEY--IDGDDIS 441
+GV++ MI +NK D + V Y +DG++++
Sbjct: 298 IGVTDIP---MIYAFNKAD-----LAGVSYPTLDGNELT 328
>gi|296450368|ref|ZP_06892125.1| GTP-binding protein HflX [Clostridium difficile NAP08]
gi|296878780|ref|ZP_06902781.1| GTP-binding protein HflX [Clostridium difficile NAP07]
gi|296260778|gb|EFH07616.1| GTP-binding protein HflX [Clostridium difficile NAP08]
gi|296430208|gb|EFH16054.1| GTP-binding protein HflX [Clostridium difficile NAP07]
Length = 425
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 189/341 (55%), Gaps = 40/341 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE + +N + + +F N LS Q +NLE ++DR LI++IF
Sbjct: 55 YIGTGKVEEL---LNLIKKESIEVVVFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RLV G + L GR SGG G +
Sbjct: 111 QRAKTREAKLQVEVASLKYMLPRLV---GSNENL--------------GRQSGGVGTKNR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++++++ R QR+ RR+ L VA+VGYTN
Sbjct: 154 GSGEKKLELDRRRIEEKITFLNRELDDLKFQRETQRSMRRKSN------LPNVALVGYTN 207
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKS++++ L D +F LFATL+ +++++L + ++ LLSDTVGF+S+LP
Sbjct: 208 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIILANNKEFLLSDTVGFVSNLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 268 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKNHIKVTEDTLKQIGADGIP---MIHVYN 324
Query: 421 KIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECI 461
KID D E+ D E +D D + KD + + ++CI
Sbjct: 325 KIDLIDVEVLD-EILDSIDKEGLFVSVKKDINIDKM-IKCI 363
>gi|255101348|ref|ZP_05330325.1| putative GTP-binding protein [Clostridium difficile QCD-63q42]
gi|255307224|ref|ZP_05351395.1| putative GTP-binding protein [Clostridium difficile ATCC 43255]
Length = 423
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 176/311 (56%), Gaps = 38/311 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE I +N + + IF N LS Q +NLE ++DR LI++IF
Sbjct: 53 YIGTGKVEEI---LNLIKKENIEIVIFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 108
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RL+ G + L GR SGG G +
Sbjct: 109 QRAKTREAKLQVEVASLKYMLPRLI---GSNENL--------------GRQSGGVGTKNR 151
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++++++ R QR+ RR+ L VA+VGYTN
Sbjct: 152 GSGEKKLELDRRRIEEKITSLNRELDDLKFQRETQRSMRRKSN------LPNVALVGYTN 205
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKS++++ L D +F LFATL+ ++++VL + ++ LLSDTVGF+S+LP
Sbjct: 206 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLANNKEFLLSDTVGFVSNLP 265
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 266 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLKQIGADGIP---MIHVYN 322
Query: 421 KIDYHDEEMGD 431
KID D E+ D
Sbjct: 323 KIDLIDVEVLD 333
>gi|255656198|ref|ZP_05401607.1| putative GTP-binding protein [Clostridium difficile QCD-23m63]
Length = 423
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 189/341 (55%), Gaps = 40/341 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE + +N + + +F N LS Q +NLE ++DR LI++IF
Sbjct: 53 YIGTGKVEEL---LNLIKKESIEVVVFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 108
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RLV G + L GR SGG G +
Sbjct: 109 QRAKTREAKLQVEVASLKYMLPRLV---GSNENL--------------GRQSGGVGTKNR 151
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++++++ R QR+ RR+ L VA+VGYTN
Sbjct: 152 GSGEKKLELDRRRIEEKITFLNRELDDLKFQRETQRSMRRKSN------LPNVALVGYTN 205
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKS++++ L D +F LFATL+ +++++L + ++ LLSDTVGF+S+LP
Sbjct: 206 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIILANNKEFLLSDTVGFVSNLP 265
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 266 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKNHIKVTEDTLKQIGADGIP---MIHVYN 322
Query: 421 KIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECI 461
KID D E+ D E +D D + KD + + ++CI
Sbjct: 323 KIDLIDVEVLD-EILDSIDKEGLFVSVKKDINIDKM-IKCI 361
>gi|431806506|ref|YP_007233407.1| GTP-binding protein HflX [Liberibacter crescens BT-1]
gi|430800481|gb|AGA65152.1| GTP-binding protein HflX [Liberibacter crescens BT-1]
Length = 447
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 206/387 (53%), Gaps = 58/387 (14%)
Query: 50 VVTLFNRDP--DDPPRLFLVQPRLKPP----------TFLQAKLNEALCLANSLEEQRDG 97
VV L +D D R+ +V+ LK +F +++L+EA+ LA +++ Q
Sbjct: 2 VVFLIKKDKICKDTSRVIVVEVVLKSISSSADDISNISFSESRLHEAVGLAQAIDLQ--- 58
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVN 157
VV++ + + T G ++ I I+ + + I ++
Sbjct: 59 ---------------VVRSFVVAVSRPSPATLIRKGKIKEINTIIHDLD----VGLIIID 99
Query: 158 AILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRG 217
L+ +QQRNLE+ W V+DR+GLI+EIF A TKE LQ ELA L Y+K RLVR
Sbjct: 100 QSLTPVQQRNLEKIWNIKVIDRIGLILEIFGRRALTKEGALQVELAHLNYQKGRLVR--- 156
Query: 218 PDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRR 277
T E R GG GF+ G GET+++ RR + ++ +L Q+E+V R
Sbjct: 157 ---SWTHLE-----------RQRGGTGFLGGPGETQIEADRRMLQQKICYLEQQLEKVVR 202
Query: 278 TRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLK 337
TR + RA R++ +A+VGYTNAGKSTL + ++ S +F + LF+TLDP L+
Sbjct: 203 TRQLHRAKRKK------VPYPIIALVGYTNAGKSTLFNRITGSSVFVENMLFSTLDPTLR 256
Query: 338 SVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 397
++LP G L+DTVGFISDLP LV AF ATLEEV +AD+++HV D + N
Sbjct: 257 RIILPHGPVAFLADTVGFISDLPTHLVAAFRATLEEVRQADVILHVRDISNRNNAAQARD 316
Query: 398 VLQVLQQVGV-SEEKLKNMIEVWNKID 423
V +L + + E ++EVWNK+D
Sbjct: 317 VYTILSDLDIDVMEDCGRILEVWNKVD 343
>gi|289422706|ref|ZP_06424546.1| GTP-binding protein HflX [Peptostreptococcus anaerobius 653-L]
gi|289156885|gb|EFD05510.1| GTP-binding protein HflX [Peptostreptococcus anaerobius 653-L]
Length = 436
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 177/311 (56%), Gaps = 43/311 (13%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRV 180
K T+ G G +E IK + AES LDA I N LSG Q RN+E GK ++DR
Sbjct: 64 KVDTATYLGSGKIEEIKIY---AES---LDATMIVFNDELSGAQIRNIEDIIGKKIIDRT 117
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
LI++IF A ++E KLQ ELA L Y RL R+ G G++ S G G
Sbjct: 118 TLILDIFAQRALSREGKLQVELAQLKY---RLPRLYGMGGQM-----------SRTGAGI 163
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
G RG GE +L+ +R IL R + + +++EV + R +QR+ R+++ + V
Sbjct: 164 GTRG----PGEQKLEKDKRHILNRAAAIRKELKEVVKHREIQRSQRQKNK------IPIV 213
Query: 301 AVVGYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
A+VGYTNAGKSTL++ L ++ +F LFATLD L+ +LP+ R+ LL DT
Sbjct: 214 ALVGYTNAGKSTLLNELIKTHPDYEAEKGVFVKDMLFATLDVTLRRALLPNKREFLLVDT 273
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+S LP L++AF +TLEEV ADL++HV+D T + + + T VL+ +G E
Sbjct: 274 VGFVSKLPHDLIEAFKSTLEEVNYADLILHVIDATNESSDIQKHTTDSVLKDLGADE--- 330
Query: 413 KNMIEVWNKID 423
K I V+NKID
Sbjct: 331 KATITVYNKID 341
>gi|116492198|ref|YP_803933.1| GTPase [Pediococcus pentosaceus ATCC 25745]
gi|116102348|gb|ABJ67491.1| GTPase [Pediococcus pentosaceus ATCC 25745]
Length = 420
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 185/339 (54%), Gaps = 41/339 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + A T+FG G VE + I A E+D I +N LS Q NLE+
Sbjct: 35 VVDQVTQKLERPNAATYFGKGKVEDL-VQIATAL---EVDTIVLNDELSPSQLTNLEKET 90
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+DR GLI+EIF AH++EAKLQ ELA L Y+ RL T +
Sbjct: 91 NLHFIDRTGLILEIFANRAHSREAKLQVELAKLQYQLPRL-------------RTSSTQR 137
Query: 233 VSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+ + G+ G GF + G+GET+L+L RR I + +H+ +++E+ + +QR R
Sbjct: 138 LDQQTAGNTGGGFTNRGSGETKLELNRRTIRNKINHINKELKEMTTSSDIQRKQR----- 192
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSG 344
D + + +VA+VGYTN GKST ++ L D +F LFATLD ++ + P
Sbjct: 193 -DKKDIPSVALVGYTNTGKSTTMNGLVRMYGRNEDKQVFEKDMLFATLDTSVRKLTFPDQ 251
Query: 345 RKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 404
++++LSDTVGF+S LP QLV AF +TL E +ADLLV ++D + P+ E T L +
Sbjct: 252 KELVLSDTVGFVSHLPHQLVKAFRSTLAEAAKADLLVQIVDISDPHYREMMQTTEDTLNE 311
Query: 405 VGVSEEKLKNMIEVWNKIDYHDEEMGDVEY--IDGDDIS 441
+GV++ MI +NK D + V Y +DG++++
Sbjct: 312 IGVTDIP---MIYAFNKAD-----LAGVSYPTLDGNELT 342
>gi|423083883|ref|ZP_17072411.1| GTP-binding protein HflX [Clostridium difficile 002-P50-2011]
gi|423087419|ref|ZP_17075807.1| GTP-binding protein HflX [Clostridium difficile 050-P50-2011]
gi|357543681|gb|EHJ25696.1| GTP-binding protein HflX [Clostridium difficile 002-P50-2011]
gi|357544837|gb|EHJ26824.1| GTP-binding protein HflX [Clostridium difficile 050-P50-2011]
Length = 425
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 189/341 (55%), Gaps = 40/341 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE + +N + + IF N LS Q +NLE ++DR LI++IF
Sbjct: 55 YIGTGKVEEL---LNLIKKENIEIVIFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RL+ G + L GR SGG G +
Sbjct: 111 QRAKTREAKLQVEVASLKYMLPRLI---GSNENL--------------GRQSGGVGTKNR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++++++ R QR+ RR+ L VA+VGYTN
Sbjct: 154 GSGEKKLELDRRRIEEKITSLNKELDDLKFQRETQRSMRRKSN------LPNVALVGYTN 207
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKS++++ L D +F LFATL+ ++++VL + ++ LLSDTVGF+S+LP
Sbjct: 208 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLTNNKEFLLSDTVGFVSNLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 268 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLKQIGADGIP---MIHVYN 324
Query: 421 KIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECI 461
KID D E+ D + +D D + KD + + ++CI
Sbjct: 325 KIDLIDVEVLD-KILDSIDKEGLFVSVKKDINIDKM-IKCI 363
>gi|194467117|ref|ZP_03073104.1| GTP-binding proten HflX [Lactobacillus reuteri 100-23]
gi|194454153|gb|EDX43050.1| GTP-binding proten HflX [Lactobacillus reuteri 100-23]
Length = 425
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 197/387 (50%), Gaps = 50/387 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE I+ + I N LS Q RNLE G +LDR LI+EIF
Sbjct: 56 TYFGKGKVEEIR----DVADANHVPTIITNDELSPSQLRNLEEGTGCRILDRTALILEIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL +T +E + + GG GF +
Sbjct: 112 ATRAQSKEAKLQVQIAELQYRLPRL-------------QTSASERLDQQT--GGGSGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I + SHL ++ + ++ +R R + + T A+VGYT
Sbjct: 157 RGAGETKLEMDRRTIQHQISHLRQELAAIDKSEQTKRKQRAK------SAIPTAALVGYT 210
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
NAGKST+++ L + +F LFATLD ++ + LP ++ LLSDTVGF+S L
Sbjct: 211 NAGKSTIMNGLVRRYGAAEEKTVFEKNMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKL 270
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P LV++F +TL E ADLL+ V+D + P+ +E T + L+Q+G+++ MI V+
Sbjct: 271 PTHLVESFKSTLAEAANADLLIQVIDYSDPHYKEMMETTNETLKQIGINDIP---MINVF 327
Query: 420 NKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN-------N 472
NK D + E +E GDD S +D S + V+ I + D
Sbjct: 328 NKADKTEIEFPILE---GDDQVVISAKQD---ASLDLLVDVIKKHLFKDYVTTTLLIPFT 381
Query: 473 DGFVSEDLGESMNKNHNDY-SDGWLLS 498
DG V L E N Y SDG LL+
Sbjct: 382 DGHVVSYLNEHTNILDTTYASDGTLLT 408
>gi|392956058|ref|ZP_10321588.1| GTP-binding proten HflX [Bacillus macauensis ZFHKF-1]
gi|391878300|gb|EIT86890.1| GTP-binding proten HflX [Bacillus macauensis ZFHKF-1]
Length = 410
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 167/298 (56%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A TF G G +E IK + + E D I N L+ Q RNL R + V+DR LI++
Sbjct: 58 ASTFIGKGKIEEIKA----LQEELEADIIVFNDELTPAQNRNLSRFFDVLVIDRTQLILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A ++E KLQ ELA L Y RL +G +S G G G RG
Sbjct: 114 IFATRAQSREGKLQVELAQLQYLLPRL--------------SGMGVSLSRLGAGIGTRG- 158
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GET+L+ RR I R + + Q++++ R R R+ + VA+VGY
Sbjct: 159 ---PGETKLEKDRRHIRSRITEIKHQLQDIVHHRDRYRERRKENQS------IQVALVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+++D + + LFATLDP + + LPSG +VL+SDTVGFI DLP L+
Sbjct: 210 TNAGKSTLFNGLTEADSYEENLLFATLDPLTRKMKLPSGFQVLVSDTVGFIQDLPTSLIA 269
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF +TLEE EADLL+HV+D +A + E+H TV +L+++ S M+ ++NK D
Sbjct: 270 AFRSTLEEAKEADLLLHVVDGSALDREQHEQTVHSILKELKASH---LPMVTLYNKRD 324
>gi|385840911|ref|YP_005864235.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|300215032|gb|ADJ79448.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
Length = 419
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 172/306 (56%), Gaps = 34/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G E I+ H+ ++D + VNA L+ Q RNLE G V+DR LI+E
Sbjct: 47 AATYFGKGKAEEIR-HVGEI---NDIDTLIVNAELTPTQLRNLEDITGLQVIDRTALILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ ++A L Y+ RL T + + G+ G G+
Sbjct: 103 IFASRAQTKEAKLQVQIAKLQYQLPRL-------------RTSSINRMDQQTAGNTGGGY 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L+L +R I +R S+L +++E+ QR AR R + TVA+VG
Sbjct: 150 TNRGSGETKLELNKRVIEKRISNLSKELKEIESVHENQRRARERSS------IKTVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTNAGKST ++ L ++ ++F LFATLD ++ + LP ++ LSDTVGF+S
Sbjct: 204 YTNAGKSTTMNGLLKLLEQPTNKEVFEKDMLFATLDTSIRKIKLPDNKEFFLSDTVGFVS 263
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
+LP QLV AF TL E +ADLL+ V+D + + ++ T Q L ++GV + MI
Sbjct: 264 NLPHQLVKAFRTTLSEANQADLLIQVIDGSDEHAKDMIETTKQTLDEIGVKDIP---MIY 320
Query: 418 VWNKID 423
+NK D
Sbjct: 321 AYNKSD 326
>gi|345017496|ref|YP_004819849.1| GTP-binding proten HflX [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032839|gb|AEM78565.1| GTP-binding proten HflX [Thermoanaerobacter wiegelii Rt8.B1]
Length = 413
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 176/296 (59%), Gaps = 33/296 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E ++ AE++ E+D + VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELEFF---AENQ-EVDLVIVNDELTGTQIKNMEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE LQ ELA L Y+ RL + G RL G G
Sbjct: 114 KRAKSKEGMLQVELAQLKYRLPRLAGLGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE+ R R++QR R+++ + +A+VGYTNA
Sbjct: 156 PGETKLETDRRHIKNRIKAIEKKLEEIERHRSLQRERRKKNR------IPVIAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++AL++++++ + +LFATLDP + +VL SGR+V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTNAEVYVEDKLFATLDPTARRLVLSSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG-VSEEKLKNMIEVWNKID 423
+TLEEV ADLL+HV+D +P++EE V +VL +G ++ K I V+NKID
Sbjct: 270 STLEEVKYADLLLHVIDVASPDMEEKIKVVEKVLSDLGAINTPK----INVFNKID 321
>gi|303257596|ref|ZP_07343608.1| GTP-binding protein HflX [Burkholderiales bacterium 1_1_47]
gi|302859566|gb|EFL82645.1| GTP-binding protein HflX [Burkholderiales bacterium 1_1_47]
Length = 373
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 171/300 (57%), Gaps = 34/300 (11%)
Query: 128 TFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
TF G G +E IK NGA+ A+ + LS QQRN+E+A G VLDR LI+E
Sbjct: 46 TFLGSGKIEEIKSEALANGAK------ALIFDVALSPAQQRNIEKAVGIEVLDRTNLILE 99
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T+E +LQ ELA L + +RLVR G + RG G
Sbjct: 100 IFRQRAKTREGRLQVELARLTHLSTRLVR-------------GWTHLERQRG----GLSK 142
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GE +++L RR I R L Q++++ R R QR +R+R + TVA+VGY
Sbjct: 143 TGGPGEKQIELDRRMIATRVKALREQLKKLERQRNTQRKSRQRGE------VLTVALVGY 196
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ +++ +LFATLD + + +V+LSDTVGFI LP QL++
Sbjct: 197 TNAGKSTLFNRLTRGGVYAADQLFATLDTTARRCFVGGDVEVVLSDTVGFIRGLPHQLIE 256
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF +TL+E +ADLL+HV+D + P EE T V +VL+++G + + ++ V+NKID
Sbjct: 257 AFKSTLDEAAQADLLLHVVDSSTPAREEQMTEVNKVLEEIGAKD--IPQLL-VFNKIDLE 313
>gi|86140868|ref|ZP_01059427.1| GTP-binding protein HflX [Leeuwenhoekiella blandensis MED217]
gi|85832810|gb|EAQ51259.1| GTP-binding protein HflX [Leeuwenhoekiella blandensis MED217]
Length = 406
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 127/327 (38%), Positives = 185/327 (56%), Gaps = 40/327 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ +++ E AIF + LS QQ+N+E+ V+DR LI++IF
Sbjct: 60 TFIGSGKMEEVRAYVDQYEIGT---AIFDDE-LSPAQQKNIEKILKCKVIDRTNLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYARTQVELAQYEYLLPRLA------GMWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R S L ++E++ + +A+QR R L VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDRISLLKKKLEKIDKQQAIQRGNRG--------ALVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNTISKSEVFAENKLFATLDTTVRKVVI-RNLPFLLSDTVGFIRKLPTQLVESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL+EV EADLL+HV+D + P E+H +V Q++ ++G S+ K M+ V+NKID +
Sbjct: 269 KSTLDEVREADLLLHVVDISHPQFEDHIASVNQIMDEIGGSD---KPMLMVFNKIDQYTH 325
Query: 428 EMGDVEYIDGDDISNFSRAEDKDTTSE 454
+ ID DD+ R E+ T E
Sbjct: 326 KT-----IDEDDLVT-ERTEEHFTLEE 346
>gi|254975808|ref|ZP_05272280.1| putative GTP-binding protein [Clostridium difficile QCD-66c26]
gi|255093195|ref|ZP_05322673.1| putative GTP-binding protein [Clostridium difficile CIP 107932]
gi|255314937|ref|ZP_05356520.1| putative GTP-binding protein [Clostridium difficile QCD-76w55]
gi|255517611|ref|ZP_05385287.1| putative GTP-binding protein [Clostridium difficile QCD-97b34]
gi|255650722|ref|ZP_05397624.1| putative GTP-binding protein [Clostridium difficile QCD-37x79]
gi|306520638|ref|ZP_07406985.1| putative GTP-binding protein [Clostridium difficile QCD-32g58]
gi|384361440|ref|YP_006199292.1| GTP-binding protein [Clostridium difficile BI1]
Length = 423
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 175/311 (56%), Gaps = 38/311 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE I +N + + IF N LS Q +NLE ++DR LI++IF
Sbjct: 53 YIGTGKVEEI---LNLIKKENIEIVIFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 108
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RL+ G + L GR SGG G +
Sbjct: 109 QRAKTREAKLQVEVASLKYMLPRLI---GSNENL--------------GRQSGGVGTKNR 151
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++ +++ R QR+ RR+ L VA+VGYTN
Sbjct: 152 GSGEKKLELDRRRIEEKITSLNRELYDLKFQRETQRSMRRKSN------LPNVALVGYTN 205
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKS++++ L D +F LFATL+ ++++VL + ++ LLSDTVGF+S+LP
Sbjct: 206 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLANNKEFLLSDTVGFVSNLP 265
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 266 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLKQIGADGIP---MIHVYN 322
Query: 421 KIDYHDEEMGD 431
KID D E+ D
Sbjct: 323 KIDLIDVEVLD 333
>gi|325916037|ref|ZP_08178327.1| GTP-binding proten HflX [Xanthomonas vesicatoria ATCC 35937]
gi|325537713|gb|EGD09419.1| GTP-binding proten HflX [Xanthomonas vesicatoria ATCC 35937]
Length = 439
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 180/320 (56%), Gaps = 33/320 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E IK AE+ G D + VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 56 TLIGSGKLEEIKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 112 AQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG---LR 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L +A+VGYTN
Sbjct: 155 GPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +AL+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP QLV AF
Sbjct: 209 AGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGG-SAILADTVGFVRDLPHQLVAAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKID D
Sbjct: 268 RSTLSEARDADLLLHIVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKIDKIDG 324
Query: 428 EMGDVEYIDGDDISNFSRAE 447
+V + D I + +R E
Sbjct: 325 --AEVRHDAQDGIPDRARRE 342
>gi|260683809|ref|YP_003215094.1| GTP-binding protein [Clostridium difficile CD196]
gi|260687469|ref|YP_003218603.1| GTP-binding protein [Clostridium difficile R20291]
gi|260209972|emb|CBA63976.1| putative GTP-binding protein [Clostridium difficile CD196]
gi|260213486|emb|CBE05186.1| putative GTP-binding protein [Clostridium difficile R20291]
Length = 425
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 175/311 (56%), Gaps = 38/311 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE I +N + + IF N LS Q +NLE ++DR LI++IF
Sbjct: 55 YIGTGKVEEI---LNLIKKENIEIVIFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RL+ G + L GR SGG G +
Sbjct: 111 QRAKTREAKLQVEVASLKYMLPRLI---GSNENL--------------GRQSGGVGTKNR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++ +++ R QR+ RR+ L VA+VGYTN
Sbjct: 154 GSGEKKLELDRRRIEEKITSLNRELYDLKFQRETQRSMRRKSN------LPNVALVGYTN 207
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKS++++ L D +F LFATL+ ++++VL + ++ LLSDTVGF+S+LP
Sbjct: 208 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLANNKEFLLSDTVGFVSNLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 268 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLKQIGADGIP---MIHVYN 324
Query: 421 KIDYHDEEMGD 431
KID D E+ D
Sbjct: 325 KIDLIDVEVLD 335
>gi|407001351|gb|EKE18367.1| hypothetical protein ACD_10C00015G0001 [uncultured bacterium]
Length = 384
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 184/340 (54%), Gaps = 37/340 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G V+ I + ES D + N LS Q+RNLER V+DR LI++IF
Sbjct: 56 TYAGKGKVQEIAAMLAATES----DLVIFNHQLSPAQERNLERELKCRVIDRTSLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G T R GG G +
Sbjct: 112 ALRAASAEGKLQVELAQLEHLSTRLVR----------GWTHLE-------RQQGGIG-MR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + R L +++++ R R VQR AR R G L V++VGYTN
Sbjct: 154 GPGETQLETDRRLLGVRVKLLKQRLDKLSRQRDVQRKARMR-----GEVL-NVSIVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +AL+ + +++ +LFATLD + + + +++SDTVGFI DLP LVDAF
Sbjct: 208 AGKSTLFNALTHAGVYTADQLFATLDTTSRKLWIEGAGNIVISDTVGFIRDLPHSLVDAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
HATLE +ADLL+HV+D + +E V +VL +G S +K +I VWNKID +
Sbjct: 268 HATLEAATDADLLLHVVDSASHARDEQIVEVNKVLHDIGASH--VKQLI-VWNKIDLTEA 324
Query: 428 EMGDVEYIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYG 465
G +D D+ N +RA + E +D E + Y
Sbjct: 325 APG----VDQDEYGNIARARVSARSGEGLDTLREALAEYA 360
>gi|270158385|ref|ZP_06187042.1| GTP-binding protein HflX [Legionella longbeachae D-4968]
gi|289163370|ref|YP_003453508.1| GTPase [Legionella longbeachae NSW150]
gi|269990410|gb|EEZ96664.1| GTP-binding protein HflX [Legionella longbeachae D-4968]
gi|288856543|emb|CBJ10338.1| putative GTPase [Legionella longbeachae NSW150]
Length = 419
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 178/309 (57%), Gaps = 31/309 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I + ++ + + VN LS Q+RNLER V+DR GLI++
Sbjct: 54 AKYYIGQGKAEEIAQLVKTCDA----ELVLVNHELSPSQERNLERLLECRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + +R ++ ++E+VR +R R ARR+ L TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRDRIKYINKRLEKVRSSRDQNRQARRKAS------LRTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL +AL+ ++ +LFATLDP ++ + LP V+++DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNALTGESIYVANQLFATLDPTMRQLNLPGSSSVIVTDTVGFIRDLPHHLVE 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATLEE +ADLL+HV+D + P+ ++ +V QVL ++ V + +I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPHWRDNVFSVQQVLDELEVHDVP---IIQVFNKIDLK 322
Query: 426 DEEMGDVEY 434
+ ++Y
Sbjct: 323 EGWEPKIDY 331
>gi|227891542|ref|ZP_04009347.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
gi|227866689|gb|EEJ74110.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
Length = 419
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 171/306 (55%), Gaps = 34/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G E I+ H+ ++D + VNA L+ Q RNLE G V+DR LI+E
Sbjct: 47 AATYFGKGKAEEIR-HVGEI---NDIDTLIVNAELTPTQLRNLEDITGLQVIDRTALILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ ++A L Y+ RL T + + G+ G G+
Sbjct: 103 IFASRAQTKEAKLQVQIAKLQYQLPRL-------------RTSSINRMDQQTAGNTGGGY 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L+L +R I +R S+L +++E+ QR AR R + TVA+VG
Sbjct: 150 TNRGSGETKLELNKRVIEKRISNLSKELKEIESVHENQRRARERSS------IKTVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTN GKST ++ L ++ ++F LFATLD ++ + LP ++ LSDTVGF+S
Sbjct: 204 YTNVGKSTTMNGLLKLLEQPTNKEVFEKDMLFATLDTSIRKIKLPDNKEFFLSDTVGFVS 263
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
DLP QLV AF TL E +ADLL+ V+D + + ++ T Q L ++GV + MI
Sbjct: 264 DLPHQLVKAFRTTLSEANQADLLIQVIDGSDEHAKDMIETTKQTLDEIGVKDIP---MIY 320
Query: 418 VWNKID 423
+NK D
Sbjct: 321 AYNKSD 326
>gi|190573719|ref|YP_001971564.1| GTP-binding phage-like protein [Stenotrophomonas maltophilia K279a]
gi|190011641|emb|CAQ45260.1| putative GTP-binding phage-related protein [Stenotrophomonas
maltophilia K279a]
gi|456734123|gb|EMF58945.1| GTP-binding protein HflX [Stenotrophomonas maltophilia EPM1]
Length = 436
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 181/320 (56%), Gaps = 33/320 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGG-NVVLADTVGFVRDLPHDLVAAF 266
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID D
Sbjct: 267 RSTLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRIDG 323
Query: 428 EMGDVEYIDGDDISNFSRAE 447
DV + D I + SR E
Sbjct: 324 --ADVRHDGQDGIPDESRRE 341
>gi|408823849|ref|ZP_11208739.1| GTP-binding protein [Pseudomonas geniculata N1]
Length = 436
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 181/320 (56%), Gaps = 33/320 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGG-NVVLADTVGFVRDLPHDLVAAF 266
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID D
Sbjct: 267 RSTLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRIDG 323
Query: 428 EMGDVEYIDGDDISNFSRAE 447
DV + D I + SR E
Sbjct: 324 --ADVRHDGQDGIPDESRRE 341
>gi|148544835|ref|YP_001272205.1| HSR1-like GTP-binding protein [Lactobacillus reuteri DSM 20016]
gi|184154175|ref|YP_001842516.1| GTPases [Lactobacillus reuteri JCM 1112]
gi|227363974|ref|ZP_03848074.1| GTP-binding protein HflX [Lactobacillus reuteri MM2-3]
gi|325683179|ref|ZP_08162695.1| GTP-binding protein HflX [Lactobacillus reuteri MM4-1A]
gi|148531869|gb|ABQ83868.1| GTP-binding protein, HSR1-related [Lactobacillus reuteri DSM 20016]
gi|183225519|dbj|BAG26036.1| GTPases [Lactobacillus reuteri JCM 1112]
gi|227070896|gb|EEI09219.1| GTP-binding protein HflX [Lactobacillus reuteri MM2-3]
gi|324977529|gb|EGC14480.1| GTP-binding protein HflX [Lactobacillus reuteri MM4-1A]
Length = 425
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 195/384 (50%), Gaps = 44/384 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE I+ + I N LS Q RNLE G +LDR LI+EIF
Sbjct: 56 TYFGKGKVEEIR----DVADANHVPTIITNDELSPSQLRNLEEGTGCRILDRTALILEIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL +T +E + + GG GF +
Sbjct: 112 ATRAQSKEAKLQVQIAELQYRLPRL-------------QTSASERLDQQT--GGGSGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I + SHL ++ + ++ +R R + + T A+VGYT
Sbjct: 157 RGAGETKLEMDRRTIQHQISHLRQELAAIDKSEQTKRKQRAK------SAIPTAALVGYT 210
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
NAGKST+++ L + +F LFATLD ++ + LP ++ LLSDTVGF+S L
Sbjct: 211 NAGKSTIMNGLVRRYGAAEEKTVFEKNMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKL 270
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P LV++F +TL E ADLL+ V+D + P+ +E T + L+Q+G+++ MI V+
Sbjct: 271 PTHLVESFKSTLAEAANADLLIQVIDYSDPHYKEMMETTNETLKQIGINDIP---MINVF 327
Query: 420 NKIDYHDEEMGDVEYIDGDDISNFSRAEDK--DTTSEPVDVECIDNYGGDD--ADNNDGF 475
NK D + E +E GDD S +D D + + +Y DG
Sbjct: 328 NKADKTEIEFPILE---GDDQVVISAKQDASLDLLVDVIKKRLFKDYVTTTLLIPFTDGH 384
Query: 476 VSEDLGESMNKNHNDY-SDGWLLS 498
V L E N Y SDG LL+
Sbjct: 385 VVSYLNEHTNILDTTYESDGTLLT 408
>gi|254525288|ref|ZP_05137343.1| GTP-binding proten HflX [Stenotrophomonas sp. SKA14]
gi|219722879|gb|EED41404.1| GTP-binding proten HflX [Stenotrophomonas sp. SKA14]
Length = 436
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 181/320 (56%), Gaps = 33/320 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGG-NVVLADTVGFVRDLPHDLVAAF 266
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID D
Sbjct: 267 RSTLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRIDG 323
Query: 428 EMGDVEYIDGDDISNFSRAE 447
DV + D I + SR E
Sbjct: 324 --ADVRHDGQDGIPDESRRE 341
>gi|424668136|ref|ZP_18105161.1| GTP-binding protein HflX [Stenotrophomonas maltophilia Ab55555]
gi|401068398|gb|EJP76922.1| GTP-binding protein HflX [Stenotrophomonas maltophilia Ab55555]
Length = 436
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 181/320 (56%), Gaps = 33/320 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGG-NVVLADTVGFVRDLPHDLVAAF 266
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID D
Sbjct: 267 RSTLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRIDG 323
Query: 428 EMGDVEYIDGDDISNFSRAE 447
DV + D I + SR E
Sbjct: 324 --ADVRHDGQDGIPDESRRE 341
>gi|219849958|ref|YP_002464391.1| GTP-binding proten HflX [Chloroflexus aggregans DSM 9485]
gi|219544217|gb|ACL25955.1| GTP-binding proten HflX [Chloroflexus aggregans DSM 9485]
Length = 461
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 166/295 (56%), Gaps = 22/295 (7%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F GPG V+ + + + D I + LS Q RNLE V+DR LI++IF
Sbjct: 86 FIGPGKVK----EVAALREQTQADLIVFDDELSPAQIRNLEEELQTQVIDRTALILDIFA 141
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA T E +LQ ELA Y RL R + T E G G + G
Sbjct: 142 RHARTHEGRLQVELAQYQYLLPRLRR------QWTHLERQTGTSGGTSAGGMVG---LRG 192
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I R + L Q+ +V R R + R RR+ G + +A+VGYTNA
Sbjct: 193 PGETQLEIDRRLIERRIAWLKEQLADVHRHRELYRQRRRQTG------VPIIALVGYTNA 246
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++A++ +D+ ++ +LFATLDP + V+LP L++DTVGFI LP QL+ AF
Sbjct: 247 GKSTLLNAMTGADVLAEDKLFATLDPTTRQVLLPGNTVALMTDTVGFIQKLPPQLIAAFR 306
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEE+ EADLL+HV+D T N +EH TV Q L+++ V K ++ V NKID
Sbjct: 307 ATLEEIEEADLLLHVVDVTHRNAQEHAQTVEQTLRELKVDH---KPILTVLNKID 358
>gi|423305193|ref|ZP_17283192.1| GTP-binding protein HflX [Bacteroides uniformis CL03T00C23]
gi|423311013|ref|ZP_17288982.1| GTP-binding protein HflX [Bacteroides uniformis CL03T12C37]
gi|392680045|gb|EIY73419.1| GTP-binding protein HflX [Bacteroides uniformis CL03T12C37]
gi|392682047|gb|EIY75397.1| GTP-binding protein HflX [Bacteroides uniformis CL03T00C23]
Length = 418
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 183/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLDAAHSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R L VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------LIRVALVGYTNVGKSTLMTLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVII-ENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G + K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLADIGAAG---KPMILVFNKIDAY 339
>gi|160891326|ref|ZP_02072329.1| hypothetical protein BACUNI_03775 [Bacteroides uniformis ATCC 8492]
gi|317481193|ref|ZP_07940268.1| GTP-binding protein HflX [Bacteroides sp. 4_1_36]
gi|156859547|gb|EDO52978.1| GTP-binding protein HflX [Bacteroides uniformis ATCC 8492]
gi|316902689|gb|EFV24568.1| GTP-binding protein HflX [Bacteroides sp. 4_1_36]
Length = 418
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 183/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLDAAHSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R L VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------LIRVALVGYTNVGKSTLMTLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVII-ENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G + K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLADIGAAG---KPMILVFNKIDAY 339
>gi|377810109|ref|YP_005005330.1| GTP-binding protein HflX [Pediococcus claussenii ATCC BAA-344]
gi|361056850|gb|AEV95654.1| GTP-binding protein HflX [Pediococcus claussenii ATCC BAA-344]
Length = 421
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 181/328 (55%), Gaps = 41/328 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G +E I + + D + V+ LS Q NLE+ G LDR GLI+EIF
Sbjct: 52 TYFGSGKLE----EITNLATAQKADTVVVSEELSPSQLSNLEKETGLHFLDRTGLILEIF 107
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH++EAKLQ ELA L Y+ RL T ++ + + G+ G G+ +
Sbjct: 108 ANRAHSREAKLQVELAKLEYQLPRL-------------RTSSSQRLDQQTAGNAGGGYTN 154
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L+L RR I + +H+ +++E+ + VQR R D + + +VA+VGYT
Sbjct: 155 RGAGETKLELNRRTIRNKIAHINKELKEISTSSEVQRKQR------DKKDIPSVALVGYT 208
Query: 307 NAGKST----LVSALSDSD---LFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
N GKST LV SD +F LFATLD ++ + P ++++LSDTVGF+S L
Sbjct: 209 NTGKSTTMNGLVRMFGRSDEKQVFEKNMLFATLDTSVRKLSFPDRKEIVLSDTVGFVSHL 268
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P L+ AF +TL E +ADLLV V+D + P+ E TT + L+++GV++ M+ +
Sbjct: 269 PHHLIQAFRSTLAEAAQADLLVQVVDLSDPHYREMMTTTEETLREIGVTDVP---MVYAF 325
Query: 420 NKIDYHDEEMGDVEY--IDGDDISNFSR 445
NK D + V Y +DG ++ +R
Sbjct: 326 NKAD-----LAGVTYPTLDGTQLTYSAR 348
>gi|295115512|emb|CBL36359.1| GTP-binding protein HflX [butyrate-producing bacterium SM4/1]
Length = 417
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 172/298 (57%), Gaps = 35/298 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G +E ++ E EL A I + LS Q RNLE A V+DR +I++
Sbjct: 60 TYLGKGKIEEVR------ERAAELHATGIVCDDELSPAQLRNLEDALQIKVMDRTMVILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF +HA T+E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 114 IFASHAVTREGKIQVELAQLRYRAARLVGLRNSLSRLGGGIGTRG--------------- 158
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +L++ RR I ER L S++E V+R R V R R R+ + A+VGY
Sbjct: 159 ---PGEKKLEVDRRLIHERIGQLKSELENVKRHREVARQQRDRNCT------VSAAIVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL++ L+D+ + + LFATLDP +++ LPSG+K+LL+DTVGFI LP L++
Sbjct: 210 TNAGKSTLLNYLTDAGILAQDMLFATLDPTTRTLELPSGQKILLTDTVGFIRKLPHHLIE 269
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF +TLEE +D+++HV+D + P +E V + L+Q+ +++ K +I V+NK+D
Sbjct: 270 AFKSTLEEARYSDIILHVVDVSNPQMETQIHIVYETLRQLEITD---KTVITVFNKMD 324
>gi|392374268|ref|YP_003206101.1| GTPase [Candidatus Methylomirabilis oxyfera]
gi|258591961|emb|CBE68266.1| putative GTPase [Candidatus Methylomirabilis oxyfera]
Length = 389
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 175/312 (56%), Gaps = 33/312 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
G G + IK A+ G++D + ++ LSG QQR+LE G +DR LI++IF+
Sbjct: 66 LIGKGKAQEIK-----AQWGGKVDLLVIDEELSGSQQRSLEELTGWKTVDRPLLILDIFS 120
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A ++E KLQ ELA L Y+ RLV + RL G
Sbjct: 121 QRARSREGKLQVELAQLDYRLPRLVGMGTQLSRLGGGIGTRGPG---------------- 164
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
ET+L+ RR I R + + ++ +VRR RA+ R R+RH + VA+VGYTNA
Sbjct: 165 --ETQLETDRRTIRRRMAKIREELAKVRRHRALLRRPRKRHA------IPIVALVGYTNA 216
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL +AL+ S + +D LF TLDP L+ V + G LLSDTVGFI LP QLV AF
Sbjct: 217 GKSTLFNALTHSGVQTDDALFVTLDPILRRVTMADGFGFLLSDTVGFIRRLPEQLVTAFK 276
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
ATLEE+ EADLL+HV+D + P + E + V +L+++G+S K ++EV+NK+D
Sbjct: 277 ATLEELDEADLLLHVIDASHPQVMEQKEAVDTILRELGLST---KPIVEVFNKMDRLTGG 333
Query: 429 MGDVEYIDGDDI 440
+G +I G I
Sbjct: 334 IGQ-SFIGGKTI 344
>gi|194365250|ref|YP_002027860.1| GTP-binding proten HflX [Stenotrophomonas maltophilia R551-3]
gi|194348054|gb|ACF51177.1| GTP-binding proten HflX [Stenotrophomonas maltophilia R551-3]
Length = 436
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 181/320 (56%), Gaps = 33/320 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGG-NVVLADTVGFVRDLPHDLVAAF 266
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID
Sbjct: 267 RSTLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRI-- 321
Query: 428 EMGDVEYIDGDDISNFSRAE 447
E DV + D I + SR E
Sbjct: 322 EGADVRHDGQDGIPDESRRE 341
>gi|260061118|ref|YP_003194198.1| GTP-binding protein HflX [Robiginitalea biformata HTCC2501]
gi|88785250|gb|EAR16419.1| GTP-binding protein HflX [Robiginitalea biformata HTCC2501]
Length = 405
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 174/301 (57%), Gaps = 34/301 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + K E+ ++ + LS +QQRN+E+ ++DR GLI++IF
Sbjct: 60 TFIGSGKLEEVQAFVK----KEEVGSVIFDDELSPVQQRNIEKQLRCKIIDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRATTSYARTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R S L ++ ++ + QR R GS L VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDRISLLKKKLAKIDKQMETQRGNR----GS----LVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S++F++ +LFATLD ++ VVL LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNVVSKSEVFAENKLFATLDTTVRKVVL-GNLPFLLSDTVGFIRKLPTQLVESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ +E K + V+NKID ++
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEEHIDSVNQILAEIDCAE---KETLMVFNKIDLYEA 325
Query: 428 E 428
E
Sbjct: 326 E 326
>gi|270294568|ref|ZP_06200770.1| GTP-binding protein HflX [Bacteroides sp. D20]
gi|270276035|gb|EFA21895.1| GTP-binding protein HflX [Bacteroides sp. D20]
Length = 418
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 183/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLDAAHSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R L VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------LIRVALVGYTNVGKSTLMTLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVII-ENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G + K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLADIGAAG---KPMILVFNKIDAY 339
>gi|295092241|emb|CBK78348.1| GTP-binding protein HflX [Clostridium cf. saccharolyticum K10]
Length = 417
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 172/298 (57%), Gaps = 35/298 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G +E ++ E EL A I + LS Q RNLE A V+DR +I++
Sbjct: 60 TYLGKGKIEEVR------ERAAELHATGIVCDDELSPAQLRNLEDALQIKVMDRTMVILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF +HA T+E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 114 IFASHAVTREGKIQVELAQLRYRAARLVGLRNSLSRLGGGIGTRG--------------- 158
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +L++ RR I ER L S++E V+R R V R R R+ + A+VGY
Sbjct: 159 ---PGEKKLEVDRRLIHERIGQLKSELENVKRHREVARQQRDRNCT------VSAAIVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL++ L+D+ + + LFATLDP +++ LPSG+K+LL+DTVGFI LP L++
Sbjct: 210 TNAGKSTLLNYLTDAGILAQDMLFATLDPTTRTLELPSGQKILLTDTVGFIRKLPHHLIE 269
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF +TLEE +D+++HV+D + P +E V + L+Q+ +++ K +I V+NK+D
Sbjct: 270 AFKSTLEEARYSDIILHVVDVSNPQMETQIHIVYETLRQLEITD---KTVITVFNKMD 324
>gi|344206942|ref|YP_004792083.1| GTP-binding proten HflX [Stenotrophomonas maltophilia JV3]
gi|343778304|gb|AEM50857.1| GTP-binding proten HflX [Stenotrophomonas maltophilia JV3]
Length = 436
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 181/320 (56%), Gaps = 33/320 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGG-NVVLADTVGFVRDLPHDLVAAF 266
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID D
Sbjct: 267 RSTLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRIDG 323
Query: 428 EMGDVEYIDGDDISNFSRAE 447
DV + D + + SR E
Sbjct: 324 --ADVRHDGQDGVPDESRRE 341
>gi|386819514|ref|ZP_10106730.1| GTP-binding protein HflX [Joostella marina DSM 19592]
gi|386424620|gb|EIJ38450.1| GTP-binding protein HflX [Joostella marina DSM 19592]
Length = 404
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 177/313 (56%), Gaps = 39/313 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E I+ ++ S+ ++ + + L+ QQ+N+E+ +LDR LI++IF
Sbjct: 60 TFIGTGKMEQIREYV----SENDIGTVIFDDELTPAQQKNIEKILKAKILDRTSLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYARTQVELAQYQYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++E++ + QR R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLEKIDKQMETQRGNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S SD+F++ +LFATLD ++ VV+ LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNVISKSDVFAENKLFATLDTTVRKVVI-GNLPFLLSDTVGFIRKLPTQLVESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID ++
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEEHIASVNQILDEIKSAD---KPTIMVFNKIDNYEH 325
Query: 428 EMGDVEYIDGDDI 440
E ID DD+
Sbjct: 326 ET-----IDEDDL 333
>gi|377832202|ref|ZP_09815166.1| GTP-binding protein HflX [Lactobacillus mucosae LM1]
gi|377554209|gb|EHT15924.1| GTP-binding protein HflX [Lactobacillus mucosae LM1]
Length = 409
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 176/304 (57%), Gaps = 36/304 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE ++ H+ AE E+ + N L+ Q +NL G +LDR LI+EIF
Sbjct: 39 TYFGSGKVEELR-HLAEAE---EVATVIANDELTPSQLQNLADQTGVRILDRTALILEIF 94
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A ++EAK+Q E+A L Y+ RL + RL +TG GG GF +
Sbjct: 95 AKRAQSREAKIQVEIAQLQYQLPRLQT--AANQRLD-QQTG------------GGSGFTN 139
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I + SHL ++++E+ ++ V+RA R + SD T A+VGYT
Sbjct: 140 RGAGETKLEMNRRTINHKISHLRAELKEIAKSEDVKRAKREK---SDT---PTAALVGYT 193
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
NAGKST+++ L + +F LFATLD ++ + LP ++ LLSDTVGF+S L
Sbjct: 194 NAGKSTIMNQLVSRFGVSEEKQVFEKNMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKL 253
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P L++AF +TL E ADLL+ V+D + PN E T + L+Q+G+ E + M+ V+
Sbjct: 254 PTHLIEAFKSTLAEAASADLLIQVIDYSDPNYEAMMRTTEKTLKQIGI--ENIP-MLYVF 310
Query: 420 NKID 423
NK D
Sbjct: 311 NKAD 314
>gi|159899445|ref|YP_001545692.1| GTP1/OBG protein [Herpetosiphon aurantiacus DSM 785]
gi|159892484|gb|ABX05564.1| GTP1/OBG protein [Herpetosiphon aurantiacus DSM 785]
Length = 444
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/314 (41%), Positives = 170/314 (54%), Gaps = 23/314 (7%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV S K T+ GPG V + S+ D + + LS Q RNLE A
Sbjct: 53 VVGTVSQKLDHPNPKTYIGPGKVR----EVADLRSETPYDVVIFDEELSPSQARNLEEAI 108
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI++IF HA T+E LQ ELA Y RL R T
Sbjct: 109 KVKVIDRTTLILDIFAQHARTREGSLQVELAQYDYLLPRLRR----------AWTHLERQ 158
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GSG + G GET+L+ +R I +R + L Q+ +V R R + R R+ G
Sbjct: 159 SGGGGGGSGVGVGLRGPGETQLESDQRIIGKRIALLKEQLADVHRHRELYRQNRQESG-- 216
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
L ++VVGYTNAGKSTL++ L+ +D+ + LFATLDP + V LP GR VL++DT
Sbjct: 217 ----LPIISVVGYTNAGKSTLLNRLAQADVLAADMLFATLDPTTRKVALPGGRAVLMTDT 272
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI LP LV AF ATLEE+ EAD+L+HVLD T N+EE TV+ L ++ V +
Sbjct: 273 VGFIQRLPTALVAAFRATLEEIAEADVLLHVLDLTHANVEEQFKTVIDTLSELKVQD--- 329
Query: 413 KNMIEVWNKIDYHD 426
K ++ V+NKID D
Sbjct: 330 KPILTVFNKIDKID 343
>gi|384427605|ref|YP_005636964.1| GTP-binding protein [Xanthomonas campestris pv. raphani 756C]
gi|341936707|gb|AEL06846.1| GTP-binding protein [Xanthomonas campestris pv. raphani 756C]
Length = 439
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/320 (40%), Positives = 179/320 (55%), Gaps = 33/320 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 56 TLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G +
Sbjct: 112 AQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRGGAIG----LR 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L +A+VGYTN
Sbjct: 155 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARMRSE------LPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +AL+ +D ++ +LFATLDP ++ + LP G VL +DTVGF+ DLP +LV AF
Sbjct: 209 AGKSTLFNALTGADAYAADQLFATLDPTVRRIALPGGSAVL-ADTVGFVRDLPHELVAAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKID
Sbjct: 268 RSTLSEARDADLLLHIVDAADPLREERIHQVDEVLQAVGAGD--LPQLL-VFNKID--KI 322
Query: 428 EMGDVEYIDGDDISNFSRAE 447
E +V + D I + +R E
Sbjct: 323 EGAEVRHDAQDGIPDQARRE 342
>gi|21231170|ref|NP_637087.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66768822|ref|YP_243584.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
8004]
gi|188991937|ref|YP_001903947.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
B100]
gi|21112810|gb|AAM41011.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66574154|gb|AAY49564.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
8004]
gi|167733697|emb|CAP51902.1| GTP-binding protein, probable [Xanthomonas campestris pv.
campestris]
Length = 439
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/320 (40%), Positives = 179/320 (55%), Gaps = 33/320 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 56 TLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G +
Sbjct: 112 AQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRGGAIG----LR 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L +A+VGYTN
Sbjct: 155 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARMRSE------LPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +AL+ +D ++ +LFATLDP ++ + LP G VL +DTVGF+ DLP +LV AF
Sbjct: 209 AGKSTLFNALTGADAYAADQLFATLDPTVRRIALPGGSAVL-ADTVGFVRDLPHELVAAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKID
Sbjct: 268 RSTLSEARDADLLLHIVDAADPLREERIHQVDEVLQAVGAGD--LPQLL-VFNKID--KI 322
Query: 428 EMGDVEYIDGDDISNFSRAE 447
E +V + D I + +R E
Sbjct: 323 EGAEVRHDAQDGIPDQARRE 342
>gi|301615114|ref|XP_002937028.1| PREDICTED: putative GTP-binding protein 6-like [Xenopus (Silurana)
tropicalis]
Length = 530
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 179/321 (55%), Gaps = 28/321 (8%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQR 166
LP VV + + + FG G +T+ I G ++ A+F+N LS + ++
Sbjct: 144 LPNWSVVNTLIMSTKSPDSKLIFGKGNFQTLTDVIKGHP---QITAVFLNVERLSSLTEK 200
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
+E AWG V DR +++ IF +AHTKEAKLQ LA L +S L
Sbjct: 201 EMEEAWGVKVFDRYTVVLNIFRFNAHTKEAKLQIALAELPLLRSNL-------------- 246
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
+ E +G G R +I G+GET L++Q+R + ER + + +E+V++ R + R R
Sbjct: 247 --KNETAHMDQQGGGSR-YIMGSGETFLEVQQRLLKEREIKIKNALEKVKKKRNLLRTQR 303
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGR 345
RR R ++V+GYTN+GK+TL+ AL+ D L +LFATLD + +LP
Sbjct: 304 RR------REFPIISVLGYTNSGKTTLIKALTGDEGLQPRDQLFATLDVTSHAGLLPCRM 357
Query: 346 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 405
V+ DT+GF+S LP L+++F ATLE+VV +DLL+HV D + P + + +VL VL+ +
Sbjct: 358 PVIYVDTIGFLSQLPHNLIESFSATLEDVVHSDLLIHVRDISHPETLKQKASVLSVLKNL 417
Query: 406 GVSEEKLKNMIEVWNKIDYHD 426
+ ++ L MIEV NKID D
Sbjct: 418 RLPQQLLDTMIEVHNKIDLVD 438
>gi|148653665|ref|YP_001280758.1| HSR1-like GTP-binding protein [Psychrobacter sp. PRwf-1]
gi|148572749|gb|ABQ94808.1| GTP-binding protein, HSR1-related protein [Psychrobacter sp.
PRwf-1]
Length = 481
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 177/305 (58%), Gaps = 32/305 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K A F G G + I + E+ D + N L+ Q+RNLE VLDR GL
Sbjct: 53 KPDAKYFIGSGKAQEIAEQVQALEA----DIVIFNHSLTPSQERNLETLLQCRVLDRTGL 108
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A T E KLQ ELA L + +RLVR G T R GG
Sbjct: 109 ILDIFAQRARTYEGKLQVELAQLNHLATRLVR----------GWT-------HLERQKGG 151
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G + G GET+L+ RR + R S L +++++V++TRA RA R++ SD + T+++
Sbjct: 152 IG-LRGPGETQLETDRRLLQIRVSQLKARLDKVKQTRAQGRAKRQK---SD---VLTISL 204
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKS+L + L D D+++ +LFATLDP L+ + +V+L DTVGF+ LP +
Sbjct: 205 VGYTNAGKSSLFNRLVDEDIYAADQLFATLDPTLRRMDWQGVGRVVLVDTVGFVRHLPHE 264
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV++FHATLEE +EADLL+HV+D ++P++ E V +VL ++ + ++ V+NKI
Sbjct: 265 LVESFHATLEETLEADLLLHVIDSSSPDMHEQIKAVKEVLSEI----DNHVPVLNVYNKI 320
Query: 423 DYHDE 427
D E
Sbjct: 321 DITGE 325
>gi|71908592|ref|YP_286179.1| GTP-binding protein, HSR1-related [Dechloromonas aromatica RCB]
gi|71848213|gb|AAZ47709.1| GTP-binding protein HflX [Dechloromonas aromatica RCB]
Length = 384
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 193/366 (52%), Gaps = 41/366 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G V+ I+ I + D + N LS QQRNLERA V+DR LI++IF
Sbjct: 56 TFAGKGKVDEIEAMIAATSA----DLVIFNHDLSPAQQRNLERALRCRVIDRTSLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G G RG
Sbjct: 112 ALRASSAEGKLQVELAQLEHLSTRLVR-------------GWTHLERQRG-GIGMRG--- 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GE +L+ RR + R L ++ ++ R R VQR AR+R + +V++VGYTN
Sbjct: 155 -PGEKQLETDRRLLGNRVKLLKERLNKLSRQRGVQRKARKRGD------VLSVSLVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +AL+ + +++ +LFATLD + + + +++SDTVGFI +LP LVDAF
Sbjct: 208 AGKSTLFNALTHAGVYAADKLFATLDTTSRKLWIEGAGNIVISDTVGFIRNLPHSLVDAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
HATLE +AD+L+HV+D + +E V +VLQ++G + ++ +I WNKID D
Sbjct: 268 HATLEAATDADILLHVVDSASHARDEQMIEVNKVLQEIGA--DAVRQVI-AWNKIDLTDA 324
Query: 428 EMGDVEYIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDDADNNDGFVSEDLGESMN 485
G ++ D+ N +R + E +D+ E + Y A + L E+
Sbjct: 325 SPG----VERDEYGNIARVRVSARSGEGLDLLRESLAEYARAKAQAR----QKALAEAEK 376
Query: 486 KNHNDY 491
+ DY
Sbjct: 377 QAQYDY 382
>gi|282880264|ref|ZP_06288980.1| GTP-binding protein HflX [Prevotella timonensis CRIS 5C-B1]
gi|281305859|gb|EFA97903.1| GTP-binding protein HflX [Prevotella timonensis CRIS 5C-B1]
Length = 415
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 209/389 (53%), Gaps = 26/389 (6%)
Query: 78 QAKLNEALCLANSLEEQRDG----YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPG 133
+AK A+ + +EQ + Y D F + V+ + K+G A T+ G G
Sbjct: 8 EAKSETAVLVGIVTQEQNEAKTNEYLDELEFLADTAGAETVKRFTQKAGGPNAVTYVGKG 67
Query: 134 TVETIKCHING-AESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAH 192
+E IK +I+ AE++ + + + LS Q RN+E+A +LDR LI++IF A
Sbjct: 68 KLEEIKQYIDEEAENERPVGMVIFDDELSAKQIRNIEKALDVKILDRTSLILDIFAMRAQ 127
Query: 193 TKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGET 252
T AK Q ELA Y RL R+ E + + G G + G GET
Sbjct: 128 TANAKTQVELAQYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGET 178
Query: 253 ELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKST 312
+L++ RR IL+R + L ++E++ + + QR R R + VA+VGYTN GKST
Sbjct: 179 QLEMDRRIILQRITLLKQRLEQIDKQKTTQRKNRGR--------MIRVALVGYTNVGKST 230
Query: 313 LVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLE 372
L++ LS S++F++ +LFATLD ++ VV+ LL+DTVGFI LP LVD+F +TL+
Sbjct: 231 LMNLLSKSEVFAENKLFATLDTTVRKVVV-ENLPFLLADTVGFIRKLPTDLVDSFKSTLD 289
Query: 373 EVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDV 432
EV EADLL+HV+D + P+ EE V L+++G +E+ +MI ++NKID + D
Sbjct: 290 EVREADLLLHVVDISHPDFEEQIHVVENTLKELGCAEK--PSMI-IFNKIDNYTWVPKDA 346
Query: 433 EYIDGDDISNFSRAEDKDTTSEPVDVECI 461
+ + N + E K T ++ +C+
Sbjct: 347 DDLTPSTAENITLDELKQTWMARLNDQCL 375
>gi|29840032|ref|NP_829138.1| GTP-binding protein HflX [Chlamydophila caviae GPIC]
gi|29834379|gb|AAP05016.1| GTP-binding protein HflX, putative [Chlamydophila caviae GPIC]
Length = 458
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 162/273 (59%), Gaps = 22/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFASRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L S
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTS 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ R RG+ + A++GYTN+GKSTL++ L+ ++ +++ +LFA
Sbjct: 207 DLKSVEKQRKERRKAKER------RGIPSFALIGYTNSGKSTLLNFLTSAETYAEDKLFA 260
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + +LP G++VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCILPCGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T +LQ++G+ K+ + V NKID
Sbjct: 321 AFEHIETTKAILQELGIEHPKI---VTVLNKID 350
>gi|387815056|ref|YP_005430543.1| GTP-binding protein hflX [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381340073|emb|CCG96120.1| putative GTP-binding protein hflX [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 432
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 172/298 (57%), Gaps = 31/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I+ + +E+ D + N LS Q+RN+ER VLDR G+I++IF
Sbjct: 57 FVGEGKLEEIRDAVAASEA----DVVLFNHALSPSQERNIERELKCRVLDRTGVILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER + ++E+VR+ R R AR+R + T+++VGYTNA
Sbjct: 155 PGETQLETDRRLLRERIKSIHRRLEKVRKQRDQGRRARKRAD------IPTLSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + ++ S +++ +LFATLDP L+ + LP V+++DTVGFI LP +LV+AF
Sbjct: 209 GKSTLFNRITTSSVYAADQLFATLDPTLRRLELPDIGPVVMADTVGFIRHLPHKLVEAFR 268
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
ATLEE +A LL+HV+DC +E+ V VL ++G E M++V+NKID D
Sbjct: 269 ATLEETTQATLLLHVIDCHDSRRDENIEQVENVLAEIGADE---IPMLQVFNKIDLLD 323
>gi|88810493|ref|ZP_01125750.1| GTP-binding protein [Nitrococcus mobilis Nb-231]
gi|88792123|gb|EAR23233.1| GTP-binding protein [Nitrococcus mobilis Nb-231]
Length = 435
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 170/295 (57%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V + I ++ + + +N LS +Q+RNLE+A+G VLDR GLI++IF
Sbjct: 64 FIGKGKVGELAARIRETDA----NLVLINHGLSAVQERNLEQAFGARVLDRTGLILDIFA 119
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + SRLVR G + + R GG G + G
Sbjct: 120 LRARSHEGKLQVELAQLRHIASRLVR-------------GWSHL----ERQKGGIG-LRG 161
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+L RR + +R L ++ +VRR R R ARR+ R TV+ VGYTNA
Sbjct: 162 PGETQLELDRRLLGQRIKQLEKRLTKVRRQREQGRQARRK------REFVTVSFVGYTNA 215
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKS L + L++S ++ LFATLD L+ + LP + +++DTVGFI +LP QL+ AF
Sbjct: 216 GKSALFNRLTESHVYIADLLFATLDTTLRRIELPGSEQAIIADTVGFIRELPHQLIAAFR 275
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TLEEV +ADLL+HV+D P E+ R V +VL +G + + ++NK+D
Sbjct: 276 STLEEVAQADLLLHVIDIADPLREQRRWEVERVLSDIGAGD---IPALLIFNKLD 327
>gi|330501624|ref|YP_004378493.1| HSR1-like GTP-binding protein [Pseudomonas mendocina NK-01]
gi|328915911|gb|AEB56742.1| GTP-binding protein, HSR1-related protein [Pseudomonas mendocina
NK-01]
Length = 433
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/309 (40%), Positives = 177/309 (57%), Gaps = 31/309 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ S + A G G VE ++ + E+ D + N L+ Q+RNLERA+ VL
Sbjct: 47 SVPSSRLTAKFLIGSGKVEELRDQVKAVEA----DLVIFNHTLTPSQERNLERAFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLDHMSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +D +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQKLEKVRSQREQARRGRKR---AD---I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
+V++VGYTNAGKSTL +AL+ S++++ +LFATLDP L+ + L ++L+DTVGFI
Sbjct: 199 PSVSLVGYTNAGKSTLFNALTTSEVYAADQLFATLDPTLRRLELDDLGPIVLADTVGFIR 258
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV+AF ATLEE +DLL+HV+D P V +VL+++G S+ M+E
Sbjct: 259 HLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMAQIEQVQEVLKEIGASD---LPMLE 315
Query: 418 VWNKIDYHD 426
V+NK+D D
Sbjct: 316 VYNKLDLLD 324
>gi|283796120|ref|ZP_06345273.1| GTP-binding protein HflX [Clostridium sp. M62/1]
gi|291076336|gb|EFE13700.1| GTP-binding protein HflX [Clostridium sp. M62/1]
Length = 417
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 171/296 (57%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E ++ G ++ I + LS Q RNLE A V+DR +I++IF
Sbjct: 60 TYLGKGKIEEVR----GRAAELHATGIVCDDELSPAQLRNLEDALQIKVMDRTMVILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+HA T+E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 116 ASHAVTREGKIQVELAQLRYRAARLVGLRNSLSRLGGGIGTRG----------------- 158
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GE +L++ RR I ER L S++E V+R R V R R R+ + A+VGYTN
Sbjct: 159 -PGEKKLEVDRRLIHERIGQLKSELENVKRHREVARQQRDRNCT------VSAAIVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL++ L+D+ + + LFATLDP +++ LPSG+K+LL+DTVGFI LP L++AF
Sbjct: 212 AGKSTLLNYLTDAGILAQDMLFATLDPTTRTLELPSGQKILLTDTVGFIRKLPHHLIEAF 271
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TLEE +D+++HV+D + P +E V + L+Q+ +++ K +I V+NK+D
Sbjct: 272 KSTLEEARYSDIILHVVDVSNPQMETQIHIVYETLRQLEITD---KTVITVFNKMD 324
>gi|120555679|ref|YP_960030.1| HSR1-like GTP-binding protein [Marinobacter aquaeolei VT8]
gi|120325528|gb|ABM19843.1| GTP-binding protein, HSR1-related protein [Marinobacter aquaeolei
VT8]
Length = 432
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 172/298 (57%), Gaps = 31/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I+ + +E+ D + N LS Q+RN+ER VLDR G+I++IF
Sbjct: 57 FVGEGKLEEIRDAVAASEA----DVVLFNHALSPSQERNIERELKCRVLDRTGVILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER + ++E+VR+ R R AR+R + T+++VGYTNA
Sbjct: 155 PGETQLETDRRLLRERIKSIHRRLEKVRKQRDQGRRARKRAD------IPTLSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + ++ S +++ +LFATLDP L+ + LP V+++DTVGFI LP +LV+AF
Sbjct: 209 GKSTLFNRITTSSVYAADQLFATLDPTLRRLELPDIGPVVMADTVGFIRHLPHKLVEAFR 268
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
ATLEE +A LL+HV+DC +E+ V VL ++G E M++V+NKID D
Sbjct: 269 ATLEETTQATLLLHVIDCHDSRRDENIEQVESVLAEIGADE---IPMLQVFNKIDLLD 323
>gi|325924507|ref|ZP_08186026.1| GTP-binding proten HflX [Xanthomonas gardneri ATCC 19865]
gi|325545002|gb|EGD16337.1| GTP-binding proten HflX [Xanthomonas gardneri ATCC 19865]
Length = 427
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 206/411 (50%), Gaps = 61/411 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 44 TLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGLILDIF 99
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G +
Sbjct: 100 AQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRGGAIG----LR 142
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L +A+VGYTN
Sbjct: 143 GPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIALVGYTN 196
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +AL+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP QLV AF
Sbjct: 197 AGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGG-SAILADTVGFVRDLPHQLVAAF 255
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL E +ADLL+H++D P EE V +VL VG + L ++ V+NKID
Sbjct: 256 RSTLSEARDADLLLHIVDAADPLREERIRQVDEVLHAVGAGD--LPQLL-VFNKIDKI-- 310
Query: 428 EMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDG------------F 475
E V + D I + +R E V V D G ++ + G
Sbjct: 311 EGAQVRHDAQDGIPDQAR-------RERVWVSARDGRGLEELQHALGQRLDLRHLTGQLR 363
Query: 476 VSEDLGESMNKNH------NDYS--DGWLLSGDEQDNVEEEFWNAAEDQQP 518
+ G +K H N+ S DGWLL D VE E AAED P
Sbjct: 364 LPPSAGRLRSKLHQLEVVRNEQSDEDGWLLDVD-LPMVEAERLAAAEDGAP 413
>gi|312114083|ref|YP_004011679.1| GTP-binding proten HflX [Rhodomicrobium vannielii ATCC 17100]
gi|311219212|gb|ADP70580.1| GTP-binding proten HflX [Rhodomicrobium vannielii ATCC 17100]
Length = 462
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 149/374 (39%), Positives = 196/374 (52%), Gaps = 38/374 (10%)
Query: 57 DPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQN 116
D D R ++ P LK + Q AL LEE G D V +
Sbjct: 25 DDDGATRAIVIVPVLKGQSGPQGAFALALSSEERLEEAV-GLAIAIGLD-------VAFS 76
Query: 117 PSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPV 176
++ + + G G VE I I AE + V+ L+ IQQRNLE+AW V
Sbjct: 77 GTVPLAQIKPAALLGTGKVEEIGA-IIAAEG---VSVAIVDHPLTPIQQRNLEKAWNAKV 132
Query: 177 LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSAR 236
LDR GLI+EIF A +KE +LQ ELA L Y+KSRLVR T E
Sbjct: 133 LDRTGLILEIFAERARSKEGRLQVELARLTYQKSRLVR------SWTHLE---------- 176
Query: 237 GRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRG 296
R GG GF+ G GET+++ RR I ER I+ ++ AV RR H
Sbjct: 177 -RQRGGFGFLGGPGETQIEADRRAIGER-------IDVIKNDLAVSERTRRLHRKRRKET 228
Query: 297 -LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
V++VGYTNAGKSTL +ALS + + + LFATLDP L+ V G +LSDTVGF
Sbjct: 229 DQQIVSLVGYTNAGKSTLFNALSGAGVLAKDMLFATLDPTLRRVEFADGGAFILSDTVGF 288
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV-SEEKLKN 414
ISDLP QL+ AFHATLEE++EADL++HV D + + E + V +VL ++G+ + +
Sbjct: 289 ISDLPTQLIVAFHATLEEILEADLILHVRDIASASSEAQKIEVERVLAEIGIDAAAQASR 348
Query: 415 MIEVWNKIDYHDEE 428
+IEVWNK D E+
Sbjct: 349 VIEVWNKSDLLSED 362
>gi|269837593|ref|YP_003319821.1| GTP-binding proten HflX [Sphaerobacter thermophilus DSM 20745]
gi|269786856|gb|ACZ38999.1| GTP-binding proten HflX [Sphaerobacter thermophilus DSM 20745]
Length = 433
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 170/312 (54%), Gaps = 30/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VVV + + + K + G G +E I+ + D + VN LS Q R+LE A
Sbjct: 45 VVVGSVTQRLPKPNMTHYVGSGKLEEIRA----LKDTLHYDVVLVNDELSPGQLRHLEDA 100
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI++IF A T E +LQ ELA L Y+ RL R+ R G G
Sbjct: 101 LDAKVIDRTALILDIFARRAQTHEGRLQVELAQLEYRLPRLTRMWTHLSRQAVGGVG--- 157
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+ G GET+L++ RR+ R + + SQ++EV R R + R
Sbjct: 158 --------------LRGPGETQLEVDRRQARRRIALIKSQLQEVHRHRELYRNR------ 197
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ + +A+VGYTNAGKSTL++ L+D+ + ++ +LFATLDP + V LPSGR VL++D
Sbjct: 198 RRRQNIPVIALVGYTNAGKSTLLNRLTDAGVLAEDKLFATLDPTTRRVTLPSGRTVLMTD 257
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP LV AF ATLEE++EA ++VHV+D T P E TV VL+ +G
Sbjct: 258 TVGFIHNLPTFLVAAFRATLEEILEASVIVHVMDVTHPKAAEQAETVRTVLEDLGADS-- 315
Query: 412 LKNMIEVWNKID 423
+ + NKID
Sbjct: 316 -RPKVTALNKID 326
>gi|423334866|ref|ZP_17312644.1| GTPases [Lactobacillus reuteri ATCC 53608]
gi|337728387|emb|CCC03488.1| GTPases [Lactobacillus reuteri ATCC 53608]
Length = 425
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 197/387 (50%), Gaps = 50/387 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G V+ I+ + I N LS Q RNLE G +LDR LI+EIF
Sbjct: 56 TYFGKGKVDEIR----DVADANHVPTIITNDELSPSQLRNLEEGTGCRILDRTALILEIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ ++A L Y+ RL +T +E + + GG GF +
Sbjct: 112 ATRAQTKEAKLQVQIAELQYRLPRL-------------QTSASERLDQQT--GGGSGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I + +HL ++ + ++ +R R + + T A+VGYT
Sbjct: 157 RGAGETKLEMDRRTIQHQIAHLRQELAAIAKSEQTKRKQRVK------SAIPTAALVGYT 210
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
NAGKST+++ L + +F LFATLD ++ + LP ++ LLSDTVGF+S L
Sbjct: 211 NAGKSTIMNGLVRKYGAAEEKTVFEKNMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKL 270
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P LV++F +TL E ADLL+ V+D + P+ +E T + L+Q+G+++ MI V+
Sbjct: 271 PTHLVESFKSTLAEAANADLLIQVIDYSDPHYKEMMETTNETLKQIGITDIP---MINVF 327
Query: 420 NKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN-------N 472
NK D + E +E GDD S +D S + V+ I + D
Sbjct: 328 NKADRTEIEFPILE---GDDQVVISAKQD---ASLDLLVDVIKKHLFKDYVTTTLLIPFT 381
Query: 473 DGFVSEDLGESMNKNHNDY-SDGWLLS 498
DG V L E N Y S+G LL+
Sbjct: 382 DGHVVSYLNEHTNILDTKYESNGTLLT 408
>gi|404486318|ref|ZP_11021509.1| GTP-binding protein HflX [Barnesiella intestinihominis YIT 11860]
gi|404336831|gb|EJZ63289.1| GTP-binding protein HflX [Barnesiella intestinihominis YIT 11860]
Length = 410
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 168/296 (56%), Gaps = 33/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G + IK +I + E+ + + LS Q +N+ER +LDR LI++IF
Sbjct: 62 TFVGSGKLSEIKAYI----EENEIGMVIFDDDLSSKQVQNIERELQVKILDRTSLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 AKRAQTANAKRQVELAQYQYLLPRLTRLW-----------------THLERQRGGIG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR IL++ SHL +++ + R +++QR R + L VA+VGYTN
Sbjct: 160 GPGETQIETDRRIILDKISHLKEELKSIDRQKSIQRKNRGK--------LVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ LS S++F++ +LFATLD ++ V++ LLSDTVGFI LP LVD+F
Sbjct: 212 VGKSTLMNLLSKSEVFAENKLFATLDTTVRKVIV-DNLPFLLSDTVGFIRKLPTHLVDSF 270
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+EV EADLL+H++D + P EE V + LQ+V S + K MI V+NKID
Sbjct: 271 KSTLDEVREADLLLHIVDISHPAFEEQIEVVNKTLQEVCDSTD--KPMILVFNKID 324
>gi|298713744|emb|CBJ33718.1| PHflX, plastid HflX GTPase [Ectocarpus siliculosus]
Length = 823
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 192/346 (55%), Gaps = 44/346 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLE-----RAWGKPVLDRVGL 182
T+ G G V+ IK +N G IF + + G QQR+LE A G VLDR L
Sbjct: 400 TYIGTGKVKEIKSAMN---QLGVCTVIFDDELSPG-QQRSLEVEFGGEAAGIKVLDRTAL 455
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF HA T+E +LQ +LA MY+ RL ++ T E R GG
Sbjct: 456 ILDIFAQHAKTREGQLQVDLALHMYRLPRLTKM------WTHLE-----------RQQGG 498
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G + G GE +L++ RR + ++ L ++ VRR R QR R++ G L VA+
Sbjct: 499 VG-LRGPGERQLEVDRRLLKDKIIALKKELSGVRRHRDFQRRGRKKLG------LPVVAL 551
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKV----LLSDTVGFISD 358
VGYTNAGKSTL++ L+ + + ++ LFATLDP + V L SG KV +L+DTVGFI
Sbjct: 552 VGYTNAGKSTLLNTLTRAGVMAENMLFATLDPTTRKVKL-SGLKVHPEVMLTDTVGFIQK 610
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP LV AF ATLEEVVEAD++VH++D ++P+ E+ + V VL ++ S+ K + +
Sbjct: 611 LPTNLVAAFRATLEEVVEADVIVHIVDVSSPSREKQESAVTGVLGEMKTSD---KPRLTM 667
Query: 419 WNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD--VECID 462
WNK+D EE + +D ++ + A T E +D V C++
Sbjct: 668 WNKLDLLPEEEQEQVRVDAEERDELTVAASA-MTGEGLDDFVTCLE 712
>gi|374334904|ref|YP_005091591.1| GTPase, HflX [Oceanimonas sp. GK1]
gi|372984591|gb|AEY00841.1| GTPase, HflX [Oceanimonas sp. GK1]
Length = 428
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 170/298 (57%), Gaps = 31/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE + + ++ D + N LS Q+RNLER VLDR GLI++IF
Sbjct: 57 FIGTGKVEELASLVQMHQA----DVVIFNHSLSPAQERNLEREVKCRVLDRTGLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER ++ ++E+V R R R AR+R+ + T+++VGYTNA
Sbjct: 155 PGETQLETDRRLLRERIKYIQKRLEKVSRQREQGRRARQRNE------IPTLSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L++SD+++ +LFATLDP L+ + LP +L+DTVGFI LP LV AF
Sbjct: 209 GKSTLFNRLTESDVYAADQLFATLDPTLRKIELPDAGLAILADTVGFIRHLPHDLVAAFK 268
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
ATL+E +ADLL+HV+DC + ++ V VL+Q+ E ++ V+NKID D
Sbjct: 269 ATLQETRDADLLLHVVDCADEQMRDNIDEVNSVLEQIEADE---IPVLMVFNKIDKLD 323
>gi|329961837|ref|ZP_08299851.1| GTP-binding protein HflX [Bacteroides fluxus YIT 12057]
gi|328531277|gb|EGF58121.1| GTP-binding protein HflX [Bacteroides fluxus YIT 12057]
Length = 420
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 184/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I G E ++ E
Sbjct: 28 ERRTNEYLDELAFLAETAGAEVVRRFTQKLDQANSVTYVGKGKLEEIKEYIKGEEEAERE 87
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 88 VGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 147
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 148 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 198
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKSTL++ L+ S++F++ +LFA
Sbjct: 199 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTLMNLLAKSEVFAENKLFA 250
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 251 TLDTTVRKVII-ENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPD 309
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G + K MI V+NKID +
Sbjct: 310 FEEQIEVVNKTLADIGAAG---KPMILVFNKIDAY 341
>gi|374604323|ref|ZP_09677287.1| GTP-binding protein [Paenibacillus dendritiformis C454]
gi|374390060|gb|EHQ61418.1| GTP-binding protein [Paenibacillus dendritiformis C454]
Length = 424
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 178/322 (55%), Gaps = 46/322 (14%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV QN S K + G G ++ + +N E+ D + N LS Q RNLE+
Sbjct: 45 VVTQNLS----KVNTTHYIGTGKLQDVTIMLNQHEA----DMVIFNDELSPSQLRNLEKD 96
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI++IF A TKEA+LQ E+A L Y RLV +R
Sbjct: 97 LDCKVVDRTLLILDIFGERAKTKEAQLQVEVAELQYMLPRLVGLR--------------- 141
Query: 232 VVSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
+ GR SGG G + GAGE +L+L RRRI ER + L ++E + R QR R++
Sbjct: 142 --ESLGRQSGGVGTKNRGAGEKKLELDRRRIEERITALNKELEILVAHRQTQRKKRKK-- 197
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDAR---------LFATLDPRLKSVVL 341
L V++VGYTNAGKST+++ L + LF+D++ LFATLD ++S+ L
Sbjct: 198 ----TELPVVSLVGYTNAGKSTVMNTLVE--LFTDSKDKFVFEKDMLFATLDTSVRSIDL 251
Query: 342 PSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQV 401
+ LL+DTVGF+S LP LV AF +TLEEV EADLLVHV+D + P E+H +
Sbjct: 252 EDNKTFLLTDTVGFVSKLPHHLVKAFRSTLEEVKEADLLVHVVDFSNPEYEQHIRITNET 311
Query: 402 LQQVGVSEEKLKNMIEVWNKID 423
L+ +G+ E + MI +NKID
Sbjct: 312 LKAIGI--EGIP-MIYAYNKID 330
>gi|88798920|ref|ZP_01114502.1| GTPase [Reinekea blandensis MED297]
gi|88778400|gb|EAR09593.1| GTPase [Reinekea blandensis MED297]
Length = 436
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 171/299 (57%), Gaps = 31/299 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I+ + E+ D + N LS Q+RN+E VLDR GLI++IF
Sbjct: 58 FVGTGKMEEIRQAVKTYEA----DVVLFNHALSPSQERNIEAGIECRVLDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L Y+ +RLVR G T R GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLQYQSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R S + ++ +V + R R AR R SD TV++VGYTNA
Sbjct: 156 PGETQLETDRRLLRARISTIHKKLNKVEKQRNQSRRARDR---SD---TPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+DS +++ +LFATLDP L+ + +P ++L+DTVGFI LP +LV+AF
Sbjct: 210 GKSTLFNYLTDSGVYAADQLFATLDPTLRRLAIPDMGDIVLADTVGFIRHLPHKLVEAFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATL+E EADLL+HV+DC + + V VL ++G S+ +EV+NKID D+
Sbjct: 270 ATLQETAEADLLLHVVDCADEDRLGNIEQVENVLDEIGSSD---IPRLEVFNKIDLLDD 325
>gi|118587116|ref|ZP_01544545.1| GTPase [Oenococcus oeni ATCC BAA-1163]
gi|421187025|ref|ZP_15644405.1| GTPase [Oenococcus oeni AWRIB418]
gi|118432395|gb|EAV39132.1| GTPase [Oenococcus oeni ATCC BAA-1163]
gi|399964732|gb|EJN99367.1| GTPase [Oenococcus oeni AWRIB418]
Length = 437
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 193/358 (53%), Gaps = 48/358 (13%)
Query: 86 CLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSL------KSGKARADTFFGPGTVETIK 139
+ ++E Q++ D D+ +E V N + K + A T+FG G VE +K
Sbjct: 15 VILTAIENQKNSQ-DFDYAIEEFKNLAVADNLEVVDVLTQKYDRPSAATYFGKGKVEELK 73
Query: 140 CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPV--LDRVGLIIEIFNAHAHTKEAK 197
+N E++ + N L+ Q RNLE+ V +DR GLI++IF A A TK AK
Sbjct: 74 ELVNAKEAR----LVISNDDLTATQIRNLEKMIASDVRVVDRTGLILDIFAARAKTKIAK 129
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS-GAGETELQL 256
LQ LA Y+ RL T A + + G+GG F S G+GET+L+L
Sbjct: 130 LQVRLAQKQYQLPRL-------------HTSLANELDQQA-GAGGASFTSRGSGETKLEL 175
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I E+ S + ++++ + + VQR R D GL VA+VGYTNAGKST ++
Sbjct: 176 NRRTIEEQISQIKTELKSLLSSSTVQRKRR------DNSGLKRVALVGYTNAGKSTWMNR 229
Query: 317 L--------SDSD---LFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
+ +DS+ +F LFATLD ++S+ LP+ R+ LLSDTVGFIS+LP LV
Sbjct: 230 IVERYSQIGNDSEEKKVFEKDMLFATLDSTVRSIRLPNKRQFLLSDTVGFISNLPHNLVA 289
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+F +TLEE +DLLV ++D + P+ + TT + L+Q+G + M+ ++NK D
Sbjct: 290 SFQSTLEEASNSDLLVQIVDVSDPHYRDMLTTTSKTLRQIGAEQIP---MVTIFNKAD 344
>gi|116490269|ref|YP_809813.1| GTPase [Oenococcus oeni PSU-1]
gi|290889655|ref|ZP_06552744.1| hypothetical protein AWRIB429_0134 [Oenococcus oeni AWRIB429]
gi|419759273|ref|ZP_14285578.1| GTPase [Oenococcus oeni AWRIB304]
gi|419857170|ref|ZP_14379880.1| GTPase [Oenococcus oeni AWRIB202]
gi|419858199|ref|ZP_14380877.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421183831|ref|ZP_15641260.1| GTPase [Oenococcus oeni AWRIB318]
gi|421193295|ref|ZP_15650544.1| GTPase [Oenococcus oeni AWRIB553]
gi|421195694|ref|ZP_15652898.1| GTPase [Oenococcus oeni AWRIB568]
gi|421196372|ref|ZP_15653561.1| GTPase [Oenococcus oeni AWRIB576]
gi|116090994|gb|ABJ56148.1| GTPase [Oenococcus oeni PSU-1]
gi|290480652|gb|EFD89287.1| hypothetical protein AWRIB429_0134 [Oenococcus oeni AWRIB429]
gi|399903968|gb|EJN91431.1| GTPase [Oenococcus oeni AWRIB304]
gi|399968468|gb|EJO02901.1| GTPase [Oenococcus oeni AWRIB318]
gi|399972499|gb|EJO06699.1| GTPase [Oenococcus oeni AWRIB553]
gi|399975335|gb|EJO09392.1| GTPase [Oenococcus oeni AWRIB568]
gi|399977572|gb|EJO11552.1| GTPase [Oenococcus oeni AWRIB576]
gi|410498235|gb|EKP89691.1| GTPase [Oenococcus oeni AWRIB202]
gi|410499123|gb|EKP90560.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 437
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 181/325 (55%), Gaps = 41/325 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + A T+FG G VE +K +N E++ + N L+ Q RNLE+
Sbjct: 47 VVDVLTQKYDRPNAATYFGKGKVEELKELVNAKEAR----LVISNDDLTATQIRNLEKMI 102
Query: 173 GKPV--LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V +DR GLI++IF A A TK AKLQ LA Y+ RL T A
Sbjct: 103 ASDVRVVDRTGLILDIFAARAKTKIAKLQVRLAQKQYQLPRL-------------HTSLA 149
Query: 231 EVVSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
+ + G+GG F S G+GET+L+L RR I E+ S + ++++ + + VQR R
Sbjct: 150 NELDQQA-GAGGASFTSRGSGETKLELNRRTIEEQISQIKTELKSLLSSSTVQRKRR--- 205
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSAL--------SDSD---LFSDARLFATLDPRLKS 338
D GL VA+VGYTNAGKST ++ + +DS+ +F LFATLD ++S
Sbjct: 206 ---DNSGLKRVALVGYTNAGKSTWMNRIVERYSQIGNDSEEKKVFEKDMLFATLDSTVRS 262
Query: 339 VVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTV 398
+ LP+ R+ LLSDTVGFIS+LP LV +F +TLEE +DLLV ++D + P+ + TT
Sbjct: 263 IRLPNKRQFLLSDTVGFISNLPHNLVASFQSTLEEASNSDLLVQIVDVSDPHYRDMLTTT 322
Query: 399 LQVLQQVGVSEEKLKNMIEVWNKID 423
+ L+Q+G + M+ ++NK D
Sbjct: 323 SKTLRQIGAEQIP---MVTIFNKAD 344
>gi|348530156|ref|XP_003452577.1| PREDICTED: putative GTP-binding protein 6-like [Oreochromis
niloticus]
Length = 522
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 220/433 (50%), Gaps = 50/433 (11%)
Query: 4 AISVVKRTQLRSITQTLTFPISLHSYS----YSSSKRQTKDNKDKDDLHD--VVTLFNRD 57
A++ ++ + +I QT F +S SSS ++ +D+D L D V LF +
Sbjct: 31 AVNTCQQQRGATILQTRAFGLSAFRLKSTDDLSSSNGFNEEGEDEDFLEDSEVEELFQQQ 90
Query: 58 -----PDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHV 112
+ R+F++ P +K + Q L +A + +G +T L
Sbjct: 91 IPAGIGEGQHRVFIIHPDVKWGSRKQHLTTAELMMAEA-----EGLVNT------LENWT 139
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERA 171
VV L + FG G +T+ I ++ G + A+FVN LS + +R E
Sbjct: 140 VVDKMILSTKTPEKKRIFGKGNFQTLTERIR--QTAG-ITAVFVNVERLSPLSEREFEEV 196
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
WG V DR +++ IF +A TKEAKLQ LA + +SRL + E
Sbjct: 197 WGVKVFDRYSVVLHIFRCNARTKEAKLQISLAEIPLLRSRL----------------KNE 240
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+ + +G G R +I G+GET ++Q+R + ER + +E++R+ R + R+ R+
Sbjct: 241 MANLDQQGGGSR-YIGGSGETLYEIQQRLLKEREIKIRLALEKLRKKRHLLRSQRKH--- 296
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
R V+V+GYTN GK+TL+ AL+ D+ L +LFATLD + + LPS VL
Sbjct: 297 ---REFPVVSVLGYTNCGKTTLIKALTGDTGLQPRNQLFATLDVTVHAGQLPSHMTVLYV 353
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DT+GF+S LP QL+D+F ATLE++ +DLL+HV D + P + VL VL+ + + +
Sbjct: 354 DTIGFLSQLPHQLIDSFSATLEDIKHSDLLIHVRDISHPETANQKVNVLNVLKNLQIPDR 413
Query: 411 KLKNMIEVWNKID 423
+ +MIEV NK D
Sbjct: 414 LMNSMIEVHNKTD 426
>gi|429204169|ref|ZP_19195460.1| GTP-binding protein [Lactobacillus saerimneri 30a]
gi|428147375|gb|EKW99600.1| GTP-binding protein [Lactobacillus saerimneri 30a]
Length = 418
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 128/330 (38%), Positives = 175/330 (53%), Gaps = 41/330 (12%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G V I A DA+ VN LS Q RNLE+ G V+DR LI++
Sbjct: 47 AATYFGAGKV----TEIFQAGQVHAADALIVNDELSPTQIRNLEQDTGLTVIDRTALILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ E+A L Y+ RL T AE + + G+ G GF
Sbjct: 103 IFASRARTKEAKLQVEIAKLQYQLPRL-------------RTSAAEKLDQQTAGNAGGGF 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ GAGET+L+L RR I ++ S L ++++V++ + Q RR GL VA+VG
Sbjct: 150 TNRGAGETKLELNRRVIEKQISQLRKKLKDVQKDQVTQSKQRR------ASGLPQVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTNAGKST ++ L D +F LFATLD ++ V ++ LLSDTVGF+S
Sbjct: 204 YTNAGKSTTMNGLLQLTGQEEDKQVFVKNMLFATLDTSVRKVHFADNKEFLLSDTVGFVS 263
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP LV AF +TL E ADLLV V+D + P+ E T + L +G+ + MI
Sbjct: 264 KLPHNLVAAFESTLAEARNADLLVQVIDASDPHAREMIATTEETLASIGIDDIP---MIY 320
Query: 418 VWNKIDYHDEEMGDVEY--IDGDDISNFSR 445
+NK D + + Y + GD I+ +R
Sbjct: 321 AYNKAD-----LANTRYPLVTGDAITYSAR 345
>gi|421187489|ref|ZP_15644848.1| GTPase [Oenococcus oeni AWRIB419]
gi|399968697|gb|EJO03129.1| GTPase [Oenococcus oeni AWRIB419]
Length = 437
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 181/325 (55%), Gaps = 41/325 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + A T+FG G VE +K +N E++ + N L+ Q RNLE+
Sbjct: 47 VVDVLTQKYDRPNAATYFGKGKVEELKELVNAKEAR----LVISNDDLTATQIRNLEKMI 102
Query: 173 GKPV--LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V +DR GLI++IF A A TK AKLQ LA Y+ RL T A
Sbjct: 103 ASDVRVVDRTGLILDIFAARAKTKIAKLQVRLAQKQYQLPRL-------------HTSLA 149
Query: 231 EVVSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
+ + G+GG F S G+GET+L+L RR I E+ S + ++++ + + VQR R
Sbjct: 150 NELDQQA-GAGGASFTSRGSGETKLELNRRTIEEQISQIKTELKSLLSSSTVQRKRR--- 205
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSAL--------SDSD---LFSDARLFATLDPRLKS 338
D GL VA+VGYTNAGKST ++ + +DS+ +F LFATLD ++S
Sbjct: 206 ---DNSGLKRVALVGYTNAGKSTWMNRIVERYSQIGNDSEEKKVFEKDMLFATLDSMVRS 262
Query: 339 VVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTV 398
+ LP+ R+ LLSDTVGFIS+LP LV +F +TLEE +DLLV ++D + P+ + TT
Sbjct: 263 IRLPNKRQFLLSDTVGFISNLPHNLVASFQSTLEEASNSDLLVQIVDVSDPHYRDMLTTT 322
Query: 399 LQVLQQVGVSEEKLKNMIEVWNKID 423
+ L+Q+G + M+ ++NK D
Sbjct: 323 SKTLRQIGAEQIP---MVTIFNKAD 344
>gi|330719417|ref|ZP_08314017.1| GTP-binding protein HflX [Leuconostoc fallax KCTC 3537]
Length = 417
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 188/349 (53%), Gaps = 45/349 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G V + H ++D I N L+ Q RNLE+ G V+DR GLI++IF
Sbjct: 44 TYFGKGKVAELADH----AKTYDVDMIIANDELTPSQIRNLEQETGTTVVDRTGLILDIF 99
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TK AKLQ +LA L Y+ RL R + T + + G+GG GF S
Sbjct: 100 AQRAQTKNAKLQVQLARLQYQLPRL--------RTSMSITLDQQT------GAGGGGFTS 145
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L+ RRRI ++ H+ ++ ++ ++ R+A+R+H L VA+VGYT
Sbjct: 146 RGAGETKLEQSRRRITKQMVHIRQELADIEKSEGT-RSAQRQHNQ-----LPNVALVGYT 199
Query: 307 NAGKSTLVSAL-----------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
NAGKST+++ L + +F LFATL+ ++ + LP + LLSDTVGF
Sbjct: 200 NAGKSTIMNQLLHRFGVGATSGTTKQVFEKDMLFATLNTTVRQLTLPDKHQFLLSDTVGF 259
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
+S LP L++AF +TL E ADLL++++D + N ++ T + L Q+GVS + M
Sbjct: 260 VSKLPHNLIEAFKSTLSEAANADLLLNIVDISDENYQDMIHTTQETLAQIGVSG---RPM 316
Query: 416 IEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNY 464
I V+NK D + I GD+ S DTTS+ V ++ I +
Sbjct: 317 ITVFNKADKAGLPFPE---ITGDNTITISAL---DTTSQDVLIDLIKKH 359
>gi|421190471|ref|ZP_15647772.1| GTPase [Oenococcus oeni AWRIB422]
gi|421192410|ref|ZP_15649676.1| GTPase [Oenococcus oeni AWRIB548]
gi|399969527|gb|EJO03861.1| GTPase [Oenococcus oeni AWRIB548]
gi|399969906|gb|EJO04220.1| GTPase [Oenococcus oeni AWRIB422]
Length = 437
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 181/325 (55%), Gaps = 41/325 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + A T+FG G VE +K +N E++ + N L+ Q RNLE+
Sbjct: 47 VVDVLTQKYDRPNAATYFGKGKVEELKELVNAKEAR----LVISNDDLTATQIRNLEKMI 102
Query: 173 GKPV--LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V +DR GLI++IF A A TK AKLQ LA Y+ RL T A
Sbjct: 103 ASDVRVVDRTGLILDIFAARAKTKIAKLQVRLAQKQYQLPRL-------------HTSLA 149
Query: 231 EVVSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
+ + G+GG F S G+GET+L+L RR I E+ S + ++++ + + VQR R
Sbjct: 150 NELDQQA-GAGGASFTSRGSGETKLELNRRTIEEQISQIKTELKSLLSSSTVQRKRR--- 205
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSAL--------SDSD---LFSDARLFATLDPRLKS 338
D GL VA+VGYTNAGKST ++ + +DS+ +F LFATLD ++S
Sbjct: 206 ---DNSGLKRVALVGYTNAGKSTWMNRILERYSQIGNDSEEKKVFEKDMLFATLDSTVRS 262
Query: 339 VVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTV 398
+ LP+ R+ LLSDTVGFIS+LP LV +F +TLEE +DLLV ++D + P+ + TT
Sbjct: 263 IRLPNKRQFLLSDTVGFISNLPHNLVASFQSTLEEASNSDLLVQIVDVSDPHYRDMLTTT 322
Query: 399 LQVLQQVGVSEEKLKNMIEVWNKID 423
+ L+Q+G + M+ ++NK D
Sbjct: 323 SKTLRQIGAEQIP---MVTIFNKAD 344
>gi|339498977|ref|YP_004697012.1| GTP-binding proten HflX [Spirochaeta caldaria DSM 7334]
gi|338833326|gb|AEJ18504.1| GTP-binding proten HflX [Spirochaeta caldaria DSM 7334]
Length = 423
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 132/335 (39%), Positives = 189/335 (56%), Gaps = 39/335 (11%)
Query: 130 FGPGTVETIKCHINGAESKGEL--DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
G G E I AE EL D + + ++ QQRN E G +DR LII+IF
Sbjct: 64 MGLGKAEEI------AERARELGVDCLIFDQDITPSQQRNWEELTGISAIDRQELIIQIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T+EA+LQ ELA L + RL + +R RG GR
Sbjct: 118 ASRARTREAELQIELAQLKHSLPRLT---------------HKYIDLSRQRG--GRYGTK 160
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR IL R L ++I+EVR+ R+ QR R + + T A+VGYTN
Sbjct: 161 GAGETKLELDRRSILRRIHQLEAEIKEVRQHRSTQRKKREKIP------IPTCALVGYTN 214
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKS+L++A++++++ ++ +LFATLDP + + + G+ VLL+DTVGFI LP LVDAF
Sbjct: 215 AGKSSLLNAMTNAEVLAEDKLFATLDPTTRRLEIGRGQPVLLTDTVGFIRRLPHDLVDAF 274
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID--YH 425
HATLEE AD+L+ VLD P+++ H T L VL+++G E+ +I + NKID
Sbjct: 275 HATLEEAALADILLIVLDAADPDVDRHYDTTLGVLKELGA--EQTPKII-ILNKIDKVSS 331
Query: 426 DEEMGDVE--YIDGDDISNFSRAEDKDTTSEPVDV 458
E + ++E Y D IS +R DT + +D+
Sbjct: 332 PERLQELEKQYSDSVSISALNRT-GLDTLARRIDL 365
>gi|62184900|ref|YP_219685.1| GTP-binding protein [Chlamydophila abortus S26/3]
gi|424824953|ref|ZP_18249940.1| putative GTP-binding protein [Chlamydophila abortus LLG]
gi|62147967|emb|CAH63715.1| putative GTP-binding protein [Chlamydophila abortus S26/3]
gi|333410052|gb|EGK69039.1| putative GTP-binding protein [Chlamydophila abortus LLG]
Length = 462
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 162/273 (59%), Gaps = 22/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ A+ ++ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGALIIDEEITASQQRNLEKRLGVVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R QR A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKEQRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLPSG++VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T ++L+++GV K +I V NKID
Sbjct: 321 AFEHIETTQEILKELGVDHPK---IITVLNKID 350
>gi|386718074|ref|YP_006184400.1| GTP-binding protein HflX [Stenotrophomonas maltophilia D457]
gi|384077636|emb|CCH12225.1| GTP-binding protein HflX [Stenotrophomonas maltophilia D457]
Length = 436
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/320 (40%), Positives = 179/320 (55%), Gaps = 33/320 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG----GSIDLR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGG-SVVLADTVGFVRDLPHDLVAAF 266
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID D
Sbjct: 267 RSTLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRIDG 323
Query: 428 EMGDVEYIDGDDISNFSRAE 447
DV + D + + SR E
Sbjct: 324 --ADVRHDGQDGVPDESRRE 341
>gi|262373437|ref|ZP_06066715.1| GTP-binding protein HflX [Acinetobacter junii SH205]
gi|262311190|gb|EEY92276.1| GTP-binding protein HflX [Acinetobacter junii SH205]
Length = 449
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 182/313 (58%), Gaps = 35/313 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ S++ K F G G V+ I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHISVQRNKPDPKFFIGSGKVDEI------AELVQELEAELVIFDHSLSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G TG
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GFTGNL 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GE++L+ RR I R + L ++ +V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGESQLETDRRLIRVRITQLKDKLVKVQQTRLQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
+ T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + V+L+
Sbjct: 197 ----AAIPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLA 252
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGF+ +L LV++F ATLEE +EA LL+HV+D +PN++E V VL+++G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSNSPNMDEQIEAVESVLKEIGAD-- 310
Query: 411 KLKNMIEVWNKID 423
++ V+NKID
Sbjct: 311 --APILHVYNKID 321
>gi|409397114|ref|ZP_11248052.1| GTP-binding protein HflX [Pseudomonas sp. Chol1]
gi|409118274|gb|EKM94674.1| GTP-binding protein HflX [Pseudomonas sp. Chol1]
Length = 433
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 175/301 (58%), Gaps = 31/301 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE ++ ++ +GE++ + N L+ Q+RNLER VLDR GLI++
Sbjct: 55 AKFLIGTGKVEELRDLVH----EGEVELVIFNHTLTPSQERNLERVLECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKQRLEKVRGQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+++D+++ +LFATLDP L+ + LP V+L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNTLTEADVYAANQLFATLDPTLRRLELPDIGPVVLADTVGFIRHLPHKLVE 266
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
+F ATLEE ADLL+HV+D P ++ VL VL ++G E ++EV+NK+D
Sbjct: 267 SFRATLEESSNADLLLHVIDAHEPERDQQIEQVLAVLAEIGADE---LPVLEVYNKVDLM 323
Query: 426 D 426
+
Sbjct: 324 E 324
>gi|430749974|ref|YP_007212882.1| GTP-binding protein HflX [Thermobacillus composti KWC4]
gi|430733939|gb|AGA57884.1| GTP-binding protein HflX [Thermobacillus composti KWC4]
Length = 428
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 181/330 (54%), Gaps = 34/330 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE ++ A+ G AIF + LSG Q RNLE ++DR LI++IF
Sbjct: 66 FLGKGKVEELRA---VAQELGATTAIF-DQELSGAQVRNLEEGLDLKIIDRTQLILDIFA 121
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E +Q ELA L Y RL RL G
Sbjct: 122 GRAKTREGIIQVELAQLSYLLPRLAGHGKNLSRLGGGIGTRGPG---------------- 165
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
ET+L+ RR I ER + L Q++EV R R+VQR RR+ G + VA+VGYTNA
Sbjct: 166 --ETKLETDRRHIRERIADLKRQLKEVVRHRSVQRERRRKTG------VTQVALVGYTNA 217
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL+ L+++D++ + +LFATLDP ++ LP G +V+L+DTVGFI +LP +LV AF
Sbjct: 218 GKSTLLRELTNADVYVENQLFATLDPTSRAWTLPDGTEVVLTDTVGFIQNLPHELVAAFR 277
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
+TLEE EADL++HV+D ++P EE V ++L ++G + + I ++NKID E
Sbjct: 278 STLEEAAEADLILHVVDSSSPYREEQMAVVDRILTELGAGD---RPRIVLYNKIDLCTNE 334
Query: 429 MGDVEYIDGDD--ISNFSRAEDKDTTSEPV 456
+ DGD +S FS A D++ V
Sbjct: 335 ELHLLRRDGDALLVSAFS-ASDREAIGRAV 363
>gi|149377523|ref|ZP_01895264.1| GTPase [Marinobacter algicola DG893]
gi|149358215|gb|EDM46696.1| GTPase [Marinobacter algicola DG893]
Length = 432
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 171/298 (57%), Gaps = 31/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I+ A + E D + N LS Q+RN+ER VLDR G+I++IF
Sbjct: 57 FVGEGKLEEIR----DAVTANEADVVLFNHALSPSQERNIERELSCRVLDRTGVILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLEHMSTRLIR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER + ++E+VR+ R R AR R + TV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRERIKSIHRRLEKVRKQRNQGRRARMRAD------IPTVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + ++ S +++ +LFATLDP L+ + LP V+++DTVGFI LP +LV+AF
Sbjct: 209 GKSTLFNRITTSTVYAADQLFATLDPTLRRLELPDIGPVVMADTVGFIRHLPHKLVEAFR 268
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
ATLEE EA +L+H++DC +E+ V +VL ++G E +++V+NKID D
Sbjct: 269 ATLEETTEASILLHIIDCHDHRRDENMEQVEEVLAEIGADE---IPVLQVFNKIDLLD 323
>gi|334882756|emb|CCB83813.1| GTPase [Lactobacillus pentosus MP-10]
Length = 431
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 169/303 (55%), Gaps = 30/303 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TFFG G V IK + +L + +NA L+ Q RNLE ++DR GLI+EIF
Sbjct: 57 TFFGKGKVVEIK----EVAAANDLHIMVINADLTPSQVRNLEEQTDIQIIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL R + + + +A G G G
Sbjct: 113 GNRARSKEAKLQVKIAQLQYQLPRL--------RTSISNRLDQQAGAAAGGGGGFTN--R 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR I +R SH +++E+ + V+RA R D GL VA+VGYTN
Sbjct: 163 GAGETQLELNRRTIQDRISHAKHELKELNKDEVVRRAQR------DKAGLPNVALVGYTN 216
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++ L D +F LFATLD ++ + P +++LLSDTVGF+SDLP
Sbjct: 217 AGKSTTMNGLVKLFGKGEDKQVFEKDMLFATLDTSIRQLTFPDNKQLLLSDTVGFVSDLP 276
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
L++AF +TL E ADLL+ V+D P+ +E T + L+++GV + MI +N
Sbjct: 277 HNLINAFRSTLAEAANADLLIQVIDYADPHYKEMMATTEKTLKEIGVHDVP---MIYAFN 333
Query: 421 KID 423
K D
Sbjct: 334 KAD 336
>gi|339637390|emb|CCC16305.1| GTPase [Lactobacillus pentosus IG1]
Length = 431
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 169/303 (55%), Gaps = 30/303 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TFFG G V IK + +L + +NA L+ Q RNLE ++DR GLI+EIF
Sbjct: 57 TFFGKGKVVEIK----EVAAANDLHIMVINADLTPSQVRNLEEQTDIQIIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL R + + + +A G G G
Sbjct: 113 GNRARSKEAKLQVKIAQLQYQLPRL--------RTSISNRLDQQAGAAAGGGGGFTN--R 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR I +R SH +++E+ + V+RA R D GL VA+VGYTN
Sbjct: 163 GAGETQLELNRRTIQDRISHAKHELKELNKDEVVRRAQR------DKAGLPNVALVGYTN 216
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++ L D +F LFATLD ++ + P +++LLSDTVGF+SDLP
Sbjct: 217 AGKSTTMNGLVKLFGKGEDKQVFEKDMLFATLDTSIRQLTFPDNKQLLLSDTVGFVSDLP 276
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
L++AF +TL E ADLL+ V+D P+ +E T + L+++GV + MI +N
Sbjct: 277 HNLINAFRSTLAEAANADLLIQVIDYADPHYKEMMATTEKTLKEIGVHDVP---MIYAFN 333
Query: 421 KID 423
K D
Sbjct: 334 KAD 336
>gi|419955623|ref|ZP_14471748.1| GTP-binding protein HflX [Pseudomonas stutzeri TS44]
gi|387967536|gb|EIK51836.1| GTP-binding protein HflX [Pseudomonas stutzeri TS44]
Length = 433
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 176/301 (58%), Gaps = 31/301 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE ++ ++ +GE++ + N L+ Q+RNLER VLDR GLI++
Sbjct: 55 AKFLIGTGKVEELRDLVH----EGEVELVIFNHTLTPSQERNLERVLECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKQRLEKVRGQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL +AL+++++++ +LFATLDP L+ + LP V+L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTEAEVYAANQLFATLDPTLRRLELPDVGPVILADTVGFIRHLPHKLVE 266
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
+F ATLEE ADLL+HV+D P ++ VL VL ++G E ++E++NK+D
Sbjct: 267 SFRATLEESSNADLLLHVIDAHEPERDQQIEQVLAVLAEIGADE---LPVLEIYNKVDLM 323
Query: 426 D 426
+
Sbjct: 324 E 324
>gi|449483705|ref|XP_002195101.2| PREDICTED: putative GTP-binding protein 6 [Taeniopygia guttata]
Length = 478
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 192/357 (53%), Gaps = 45/357 (12%)
Query: 69 PRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADT 128
P+ P T + ++ EA+ L ++L+ + DK + P +NP+ K
Sbjct: 64 PQKSPLTTAELQIAEAVALVDTLQ-------NWTVLDKIIIP---TKNPNKK-------F 106
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
FG G + + I + + A+F+N +S + ++ LE AWG PV DR +++ IF
Sbjct: 107 VFGKGNFQVLTEKI---KKLPHVTAVFLNVERISSLTKKELEGAWGVPVFDRYTVVLHIF 163
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+A TKEAKLQ LA + +S L +S R + GG +I
Sbjct: 164 RCNARTKEAKLQIALAEIPLLRSNL-----------------KNELSQRDQQRGGSRYIM 206
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GET L+ Q R + ER + + +E++RR RA+ RA RR+ V+V+GYTN
Sbjct: 207 GSGETFLETQNRVLKERELKIRNALEKLRRKRALLRAQRRKCE------FPMVSVMGYTN 260
Query: 308 AGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
+GK+TL+ AL+ ++ L +LFATLD + LPS V+ DT+GF++DLP LV++
Sbjct: 261 SGKTTLIKALTGEAGLQPRDQLFATLDITAHAGYLPSHMAVIYVDTIGFLTDLPHNLVES 320
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
F ATLEEV +DL+VHV D T P + TVL VL+ + + L +M+EV NK+D
Sbjct: 321 FSATLEEVAYSDLIVHVRDITHPETILQKATVLSVLRNLNLPSHLLDSMVEVHNKVD 377
>gi|160878692|ref|YP_001557660.1| GTP-binding protein HflX [Clostridium phytofermentans ISDg]
gi|160427358|gb|ABX40921.1| GTP-binding proten HflX [Clostridium phytofermentans ISDg]
Length = 420
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 174/306 (56%), Gaps = 31/306 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T+ G G +E I+ I + G I + LS Q RNLE A V+DR +
Sbjct: 55 KIHPGTYVGKGKIEEIRLLIEQLGATG----IICDDELSPAQLRNLEDALQAKVMDRTMI 110
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF HA T+E K+Q ELA L Y+ +RL+ +R RL G
Sbjct: 111 ILDIFAQHASTREGKIQVELAQLKYRATRLIGMRNSLSRLGGGIGT-------------- 156
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G GE +L++ RR I +R + L ++++++R R V R+ R ++ + VA+
Sbjct: 157 ----RGPGEKKLEIDRRLIKDRIAQLNRELDDIKRNREVARSLRMKNP------IPVVAI 206
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL++ L+++D+ LFATLDP +++ L SG++VLL+DTVGFI LP
Sbjct: 207 VGYTNAGKSTLLNRLTEADVLEANMLFATLDPTTRNLSLESGQQVLLTDTVGFIRKLPHH 266
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
L+DAF +TLEE AD+++HV+D + P + V + L+++ V++ K +I V+NK
Sbjct: 267 LIDAFRSTLEEAKYADIIIHVVDASNPQAYKQMHIVYETLKKLQVTD---KTVITVFNKQ 323
Query: 423 DYHDEE 428
D EE
Sbjct: 324 DLVQEE 329
>gi|429740715|ref|ZP_19274391.1| GTP-binding protein HflX [Porphyromonas catoniae F0037]
gi|429160251|gb|EKY02725.1| GTP-binding protein HflX [Porphyromonas catoniae F0037]
Length = 410
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 185/341 (54%), Gaps = 35/341 (10%)
Query: 84 ALCLANSLEEQRDGYFD-TDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI 142
L N E+Q Y D DF + VV+ + + TF G G +E I+ ++
Sbjct: 18 GLITRNQTEDQAKEYLDELDFLSRTAGVEPVVRFLQ-RLEQPHPVTFVGKGKLEEIRLYV 76
Query: 143 NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAEL 202
+ E+ + + L+ Q RN+E +LDR LI++IF A A T AK Q EL
Sbjct: 77 E----EQEIGLVIFDDELTPKQLRNIEAVLKVRILDRTSLILDIFAARATTAYAKTQVEL 132
Query: 203 AALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRIL 262
A Y RL R+ + R GG G + G GET+L+ +R I
Sbjct: 133 AQYRYMLPRLTRL-----------------WTHLERQRGGVG-MRGPGETQLETDKRLIQ 174
Query: 263 ERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDL 322
+R +HL +++ + R A+QR R + L VA+VGYTN GKSTL++ LS SD+
Sbjct: 175 DRIAHLKEELKGIDRQMAMQRKNRGK--------LVRVALVGYTNVGKSTLMNVLSKSDV 226
Query: 323 FSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVH 382
F++ +LFATLD ++ V++ LLSDTVGFI LP +L+++F +TL+EV EADLLVH
Sbjct: 227 FAENKLFATLDTTVRKVIV-HNLPFLLSDTVGFIRKLPTELIESFKSTLDEVREADLLVH 285
Query: 383 VLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
V+D + PN EEH V L+++ +E K+++ V+NKID
Sbjct: 286 VVDISHPNFEEHIEVVSSTLREITAGDE--KSVLLVFNKID 324
>gi|445421547|ref|ZP_21435949.1| GTP-binding protein HflX [Acinetobacter sp. WC-743]
gi|444757515|gb|ELW82037.1| GTP-binding protein HflX [Acinetobacter sp. WC-743]
Length = 443
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 171/300 (57%), Gaps = 33/300 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I + E++ + + LS Q+RNLER V+DR GLI++IF
Sbjct: 58 FIGTGKAEEIAEQVEN----DEIELVIFDQALSPAQERNLERILKCRVIDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + SRLVR R S GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLDHLSSRLVRSR-----------------SNLDSQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET L+ RR + R L ++E+VR+TR RAAR++ + TV++VGYTNA
Sbjct: 156 PGETLLETDRRLLRIRMEQLKDRLEKVRKTRVQGRAARQKAN------IPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L++SD+++ +LFATLDP L+ + ++L+DTVGF+ +L LV++F
Sbjct: 210 GKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTLVLADTVGFVRNLAHSLVESFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY-HDE 427
ATLEE +EA LL+HV+D ++P++ E V VL+++G L+ V+NKID HDE
Sbjct: 270 ATLEETLEATLLLHVIDASSPDMMEQIDAVETVLKEIGADIPTLR----VYNKIDQSHDE 325
>gi|386817130|ref|ZP_10104348.1| GTP-binding proten HflX [Thiothrix nivea DSM 5205]
gi|386421706|gb|EIJ35541.1| GTP-binding proten HflX [Thiothrix nivea DSM 5205]
Length = 426
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 174/295 (58%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I+ +N ++ AIF ++ LS Q+RNLE+ VLDR GLI++IF
Sbjct: 59 FIGEGKAEEIRLLLNAKDAN---LAIFDHS-LSPAQERNLEKRLQCRVLDRTGLILDIFA 114
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 115 QRARSHEGKLQVELAQLKHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 156
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I ER + ++E+V+ R R AR++ + TV++VGYTNA
Sbjct: 157 PGETQLETDRRLIGERIKQINKRLEKVQNQREQGRQARKKAE------IPTVSLVGYTNA 210
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL +AL+++++++ +LFATLDP L+ V LP+ ++ +L+DTVGFI LP LV AF
Sbjct: 211 GKSTLFNALTEAEVYAADQLFATLDPTLRKVQLPNQQETILADTVGFIRHLPHDLVAAFR 270
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+E ++ADLL+HV+D LE +R V +V+ ++G IEV NKID
Sbjct: 271 STLQETIDADLLLHVIDSHDEQLELYREQVNKVIAEIGAENVP---QIEVMNKID 322
>gi|430376931|ref|ZP_19431064.1| GTP - binding protein, phage lambda cII repressor [Moraxella
macacae 0408225]
gi|429540068|gb|ELA08097.1| GTP - binding protein, phage lambda cII repressor [Moraxella
macacae 0408225]
Length = 449
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 206/400 (51%), Gaps = 62/400 (15%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
+ K A F G G + I + E+ D + N L+ Q+RNLER VLDR
Sbjct: 50 RRSKPDAKYFVGTGKADEIAQLVTLHEA----DIVIFNHSLTPSQERNLERLLKCRVLDR 105
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
GLI++IF A T E KLQ ELA L + +RLVR G T R
Sbjct: 106 TGLILDIFAQRARTYEGKLQVELAQLNHLATRLVR----------GWTHLE-------RQ 148
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG G + G GET+L+ RR + R + L +++++V++TRA RA R++ SD + T
Sbjct: 149 KGGIG-LRGPGETQLETDRRLLQVRVNQLNTKLDKVKQTRAQGRAKRQK---SD---IPT 201
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
+++VGYTNAGKSTL + L++ +++ +LFATLDP L+ V V+L DTVGF+ L
Sbjct: 202 ISLVGYTNAGKSTLFNHLTNETVYAADKLFATLDPTLRHVNWKGLGSVILVDTVGFVRHL 261
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN---MI 416
P +LV+AFHATLEE +EADLL+HV+D + ++ E V VL Q+ KN ++
Sbjct: 262 PHELVEAFHATLEETLEADLLLHVIDSSREDMHEQIDAVKSVLSQI-------KNNVPVL 314
Query: 417 EVWNKID---------YHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 467
V+NKID Y D + YI + + DK TT+ +
Sbjct: 315 NVFNKIDLTCKPAHIGYSDNHQPNRVYISAQN----ALGIDKLTTA-------VQQLIAG 363
Query: 468 DADNNDGFVSEDL---GESMNKNHNDYSDGWLLSGDEQDN 504
D N ++ L G+ +N H D W L+ DEQ N
Sbjct: 364 DLQNYQLTIAPTLPNSGQLLNHLH-DLGVIWQLNYDEQGN 402
>gi|392948035|ref|ZP_10313651.1| GTPase, HflX subfamily [Lactobacillus pentosus KCA1]
gi|392436685|gb|EIW14593.1| GTPase, HflX subfamily [Lactobacillus pentosus KCA1]
Length = 431
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 169/303 (55%), Gaps = 30/303 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TFFG G V IK + +L + +NA L+ Q RNLE ++DR GLI+EIF
Sbjct: 57 TFFGKGKVVEIK----EVAAANDLHIMVINADLTPSQVRNLEEQTDIQIIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL R + + + +A G G G
Sbjct: 113 GNRARSKEAKLQVKIAQLQYQLPRL--------RTSISNRLDQQAGAAAGGGGGFTN--R 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR I +R SH +++E+ + V+RA R D GL VA+VGYTN
Sbjct: 163 GAGETQLELNRRTIQDRISHAKHELKELNKDEVVRRAQR------DKAGLPNVALVGYTN 216
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++ L D +F LFATLD ++ + P +++LLSDTVGF+SDLP
Sbjct: 217 AGKSTTMNGLVKLFGKGEDKQVFEKDMLFATLDTSIRQLTFPDNKQLLLSDTVGFVSDLP 276
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
L++AF +TL E ADLL+ V+D P+ +E T + L+++GV + MI +N
Sbjct: 277 HNLINAFRSTLAEAANADLLIQVIDYADPHYKEMMATTEKTLKEIGVHDVP---MIYAFN 333
Query: 421 KID 423
K D
Sbjct: 334 KAD 336
>gi|323692185|ref|ZP_08106428.1| GTP-binding protein HflX [Clostridium symbiosum WAL-14673]
gi|355623742|ref|ZP_09047342.1| GTP-binding protein HflX [Clostridium sp. 7_3_54FAA]
gi|323503759|gb|EGB19578.1| GTP-binding protein HflX [Clostridium symbiosum WAL-14673]
gi|354822245|gb|EHF06612.1| GTP-binding protein HflX [Clostridium sp. 7_3_54FAA]
Length = 418
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 174/302 (57%), Gaps = 31/302 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E ++ + + G + + LS Q RNLE A V+DR +I++IF
Sbjct: 60 TYLGKGKIEEVRERVFELGATG----VICDDELSPAQLRNLENALDTKVMDRTMVILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+HA T E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 116 ASHAVTSEGKIQVELAQLKYRAARLVGLRNSLSRLGGGIGTRG----------------- 158
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GE +L++ RR I +R L +++ EV+R R V R R R+ + A+VGYTN
Sbjct: 159 -PGEKKLEVDRRLIHDRIGQLKAELLEVKRHREVARKQRDRNYT------LSAAIVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL++ L+ + + ++ +LFATLDP + + LPSG+K+LL+DTVGFI LP L++AF
Sbjct: 212 AGKSTLLNKLTGAGILAEDKLFATLDPTTRGMELPSGQKILLTDTVGFIRKLPHHLIEAF 271
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TLEE +D+++HV+DC +P ++ V + L+++ + + K ++ V+NKID ++
Sbjct: 272 RSTLEEARYSDIILHVVDCVSPQMDSQIHIVYETLRKLEIKD---KTIVTVFNKIDCLEQ 328
Query: 428 EM 429
E+
Sbjct: 329 EV 330
>gi|403382132|ref|ZP_10924189.1| GTP-binding protein [Paenibacillus sp. JC66]
Length = 420
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 162/277 (58%), Gaps = 32/277 (11%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+ N LS Q RNLE V+DR LI++IF A T+EA+LQ E+A L Y+ RLV
Sbjct: 76 VLFNDELSPSQIRNLEADLDCMVIDRTMLILDIFAERAKTREAQLQVEIAELQYQLPRLV 135
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
+R GR +G G+G + GAGET+L+L RRRI E+ + L Q+E
Sbjct: 136 GLRESLGR--------------QGGGAGLKN--RGAGETKLELDRRRIEEKITVLSKQLE 179
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSD-------SDLFSDA 326
E+ R VQR R + + L + A+VGYTNAGKSTL++A+ + +F
Sbjct: 180 ELVAQRQVQRKQRHK------QALPSAALVGYTNAGKSTLMNAMMEVFEPAKIKQVFEKD 233
Query: 327 RLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDC 386
LFATL+ ++S+ LP + +LL+DTVGF+S LP LV AF +TLEEV EADLL+HV+DC
Sbjct: 234 MLFATLETSVRSITLPDNKSLLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDC 293
Query: 387 TAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+ P+ +E + L ++GV + + + +NK D
Sbjct: 294 SNPHYKEMMEITERTLAEIGVKDIPI---LYAYNKAD 327
>gi|114799526|ref|YP_760704.1| putative GTP-binding protein HflX [Hyphomonas neptunium ATCC 15444]
gi|114739700|gb|ABI77825.1| putative GTP-binding protein HflX [Hyphomonas neptunium ATCC 15444]
Length = 442
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/269 (44%), Positives = 167/269 (62%), Gaps = 24/269 (8%)
Query: 156 VNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRV 215
++A L+ +QQRNLE+ G V+DR GLI+EIF A TKE +LQ ELA L+Y++SRLVR
Sbjct: 86 IDASLTPVQQRNLEKRLGVKVIDRTGLILEIFGLRARTKEGRLQVELARLLYERSRLVRT 145
Query: 216 RGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEV 275
T E R GG GF+SG GE++L+ RR + ++ L +++V
Sbjct: 146 ------WTHLE-----------RQRGGGGFLSGPGESQLEADRRMLDDKIVRLRRDLDDV 188
Query: 276 RRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPR 335
+RTR VQR RRR G VA+VGYTN+GKSTL + L+ SD+F+ FATLDP
Sbjct: 189 KRTREVQRQGRRRSGKP------VVALVGYTNSGKSTLFNRLTGSDVFAKDMPFATLDPT 242
Query: 336 LKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLD-CTAPNLEEH 394
++ + LP+ + L DTVGFI+DLP L+D+F ATLEE ++ADLL+HV D +A ++E+
Sbjct: 243 IRRLDLPTLGEAALIDTVGFITDLPTHLIDSFQATLEESLQADLLIHVRDRASASDMEQA 302
Query: 395 RTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
L + + S L MIE WNK+D
Sbjct: 303 EDVALVLERLEKESGLPLPPMIEAWNKMD 331
>gi|403050999|ref|ZP_10905483.1| GTP-binding protein [Acinetobacter bereziniae LMG 1003]
Length = 443
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 171/300 (57%), Gaps = 33/300 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I + E++ + + LS Q+RNLER V+DR GLI++IF
Sbjct: 58 FIGTGKAEEIAEQVEN----DEIELVIFDQALSPAQERNLERILKCRVIDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + SRLVR R S GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLDHLSSRLVRSR-----------------SNLDSQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET L+ RR + R L ++E+VR+TR RAAR++ + TV++VGYTNA
Sbjct: 156 PGETLLETDRRLLRIRMEQLKDRLEKVRKTRVQGRAARQKAN------IPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L++SD+++ +LFATLDP L+ + ++L+DTVGF+ +L LV++F
Sbjct: 210 GKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTLVLADTVGFVRNLAHSLVESFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY-HDE 427
ATLEE +EA LL+HV+D ++P++ E V VL+++G L+ V+NKID HDE
Sbjct: 270 ATLEETLEATLLLHVIDASSPDMMEQIDAVETVLKEIGADIPTLR----VYNKIDQSHDE 325
>gi|358448122|ref|ZP_09158627.1| GTP-binding protein, HSR1-related [Marinobacter manganoxydans
MnI7-9]
gi|385332239|ref|YP_005886190.1| small GTP-binding protein [Marinobacter adhaerens HP15]
gi|311695389|gb|ADP98262.1| small GTP-binding protein [Marinobacter adhaerens HP15]
gi|357227550|gb|EHJ06010.1| GTP-binding protein, HSR1-related [Marinobacter manganoxydans
MnI7-9]
Length = 432
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 172/295 (58%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I+ A + E D + N LS Q+RN+E VLDR G+I++IF
Sbjct: 57 FVGEGKLEEIR----DAVAANEADVVLFNHALSPRQERNIEHELKCRVLDRTGVILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER + ++E+VRR R R AR+R +D + TV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRERIKSIHKRLEKVRRQRNQGRRARQR---AD---IPTVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + ++ S +++ +LFATLDP L+ + LP V+++DTVGFI LP +LV+AF
Sbjct: 209 GKSTLFNRITTSSVYAADQLFATLDPTLRRLELPDVGPVVMADTVGFIRHLPHKLVEAFR 268
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEE +A LL+H++D P EE+ V +VL ++G + M++V+NKID
Sbjct: 269 ATLEETTQATLLLHIIDSHDPRREENIEQVEEVLAEIGADD---IPMLQVFNKID 320
>gi|326798579|ref|YP_004316398.1| GTP-binding protein HflX [Sphingobacterium sp. 21]
gi|326549343|gb|ADZ77728.1| GTP-binding proten HflX [Sphingobacterium sp. 21]
Length = 400
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 181/341 (53%), Gaps = 34/341 (9%)
Query: 85 LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHING 144
+ N E+Q Y + F E + + + K TF G G ++ IK ++N
Sbjct: 21 IITPNETEDQEKEYLEELAFLVETAGGETINTFTQRMQKPDRATFVGSGKLDEIKAYVNA 80
Query: 145 AESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAA 204
E+ D + + LS Q RN+E +LDR LI++IF A T +AK Q ELA
Sbjct: 81 EEA----DIVVFDDELSPSQLRNIENELKIKILDRSNLILDIFANRAKTAQAKTQVELAQ 136
Query: 205 LMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILER 264
L Y RL R+ + R GG G + G GET+++ RR IL +
Sbjct: 137 LQYLLPRLTRMW-----------------THLERQKGGIG-MRGPGETQIESDRRMILNK 178
Query: 265 RSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFS 324
S L +++++ + QR R L VA+VGYTN GKST+++ +S S++F+
Sbjct: 179 ISLLKEKLKQIDKQNETQRKNRGE--------LIRVALVGYTNVGKSTIMNMISKSEVFA 230
Query: 325 DARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVL 384
+ +LFATLD ++ VV+ LLSDTVGFI LP LV+ F +TL+EV EAD+LVHV+
Sbjct: 231 ENKLFATLDTTVRKVVI-DNLPFLLSDTVGFIRKLPHHLVECFKSTLDEVREADILVHVV 289
Query: 385 DCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
D + PN E+H TV + L+ +G + K +I V+NKID +
Sbjct: 290 DISHPNFEDHINTVNETLKDLGAID---KPVITVFNKIDAY 327
>gi|323486669|ref|ZP_08091990.1| hypothetical protein HMPREF9474_03741 [Clostridium symbiosum
WAL-14163]
gi|323400050|gb|EGA92427.1| hypothetical protein HMPREF9474_03741 [Clostridium symbiosum
WAL-14163]
Length = 418
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 174/302 (57%), Gaps = 31/302 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E ++ + + G + + LS Q RNLE A V+DR +I++IF
Sbjct: 60 TYLGKGKIEEVRERVFELGATG----VICDDELSPAQLRNLENALDTKVMDRTMVILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+HA T E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 116 ASHAVTSEGKIQVELAQLKYRAARLVGLRNSLSRLGGGIGTRG----------------- 158
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GE +L++ RR I +R L +++ EV+R R V R R R+ + A+VGYTN
Sbjct: 159 -PGEKKLEVDRRLIHDRIGQLKAELLEVKRHREVARKQRDRNYT------LSAAIVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL++ L+ + + ++ +LFATLDP + + LPSG+K+LL+DTVGFI LP L++AF
Sbjct: 212 AGKSTLLNKLTGAGILAEDKLFATLDPTTRGMELPSGQKILLTDTVGFIRKLPHHLIEAF 271
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TLEE +D+++HV+DC +P ++ V + L+++ + + K ++ V+NKID ++
Sbjct: 272 RSTLEEARYSDIILHVVDCVSPQMDSQIHIVYETLRKLEIKD---KTIVTVFNKIDCLEQ 328
Query: 428 EM 429
E+
Sbjct: 329 EV 330
>gi|225388053|ref|ZP_03757777.1| hypothetical protein CLOSTASPAR_01787 [Clostridium asparagiforme
DSM 15981]
gi|225045906|gb|EEG56152.1| hypothetical protein CLOSTASPAR_01787 [Clostridium asparagiforme
DSM 15981]
Length = 427
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 178/313 (56%), Gaps = 39/313 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
V+QN K T+ G G +E +K + ELDA + + LS Q +NLE
Sbjct: 49 VIQNRE----KVHPGTYLGKGKIEEVKDLV------WELDATGVVCDDELSPAQLKNLEA 98
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
A V+DR +I++IF + AHT+E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 99 ALDTKVMDRTMVILDIFASRAHTREGKIQVELAQLKYRAARLVGMRASLSRLGGGIGTRG 158
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
GE +L++ RR I ER L +++E+V+R R V R +R G
Sbjct: 159 ------------------PGEKKLEVDRRLIHERIGQLKAELEDVKRHREVTRQ-QREQG 199
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
+ + A+VGYTNAGKSTL++ L+D+D+ ++ +LFATLDP +S LP +++LL+
Sbjct: 200 CA-----VSAAIVGYTNAGKSTLLNHLTDADILAEDKLFATLDPTTRSFTLPGDQQILLT 254
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGFI LP L++AF +TLEE +D+++HV+DC+ P ++ V + L+ + + +
Sbjct: 255 DTVGFIRKLPHHLIEAFKSTLEEAKYSDIILHVVDCSNPQMDMQMHVVRETLKDLEIVD- 313
Query: 411 KLKNMIEVWNKID 423
K ++ V+NK D
Sbjct: 314 --KTVVTVFNKTD 324
>gi|406943170|gb|EKD75236.1| hypothetical protein ACD_44C00200G0003 [uncultured bacterium]
Length = 415
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 165/295 (55%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E ++ I ++ D + VN L+ Q+RNLE VLDR GLI++IF
Sbjct: 55 FIGSGKAEEVQKAIQTTQA----DLVLVNHTLTPSQERNLETLLKCRVLDRTGLILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + SRL+R G T R GG G + G
Sbjct: 111 QRARTFEGKLQVELAQLQHLASRLIR----------GWTHLE-------RQKGGIG-LRG 152
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R H+ Q+E+VR RA R +R+R LATV++VGYTNA
Sbjct: 153 PGETQLETDRRLIRNRIKHIGKQLEKVRIQRAQGRRSRQRSA------LATVSLVGYTNA 206
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ + F +LFATLD L+ + L ++L+DTVGFI ++P L+ AF
Sbjct: 207 GKSTLFNCLTGAGSFVANQLFATLDTTLRRIKLTPTEPLILADTVGFIKNIPHTLIQAFR 266
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TLEE V A LL+HV+D ++P EE V +VL+++ L I ++NKID
Sbjct: 267 STLEEAVYATLLLHVIDASSPEREEQINEVEKVLKEIDAHATPL---IRIYNKID 318
>gi|78189141|ref|YP_379479.1| GTP-binding protein HflX [Chlorobium chlorochromatii CaD3]
gi|78171340|gb|ABB28436.1| GTP-binding protein HflX [Chlorobium chlorochromatii CaD3]
Length = 431
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 177/308 (57%), Gaps = 39/308 (12%)
Query: 130 FGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNA 189
G G V+ ++ +I + +D + + LS Q RNLERAWG V+DR GLI+ IF
Sbjct: 64 IGRGKVDEMEAYIKSEK----IDVVIFDDDLSPGQARNLERAWGCKVIDRTGLILHIFAI 119
Query: 190 HAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGA 249
A + +AK+Q ELA L Y RL +G +S + G G +G
Sbjct: 120 RAQSTQAKMQVELAQLEYILPRL--------------SGAWTHLSKQKGGIGNKG----P 161
Query: 250 GETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAG 309
GET+++ RR + R + L ++ EV R + +R+ ++ V++VGYTNAG
Sbjct: 162 GETQIETDRRLVRNRIALLKKKLREVERQHYTRTRSRQ--------NVSRVSLVGYTNAG 213
Query: 310 KSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
KSTL++AL ++ F++ RLFATLD + + + L + VLLSDTVGFI LP LV++F
Sbjct: 214 KSTLMNALCPQAEAFAENRLFATLDTKTRRLELKINKLVLLSDTVGFIRKLPHTLVESFK 273
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE- 427
+TL+EV++AD L+HV+D + P+ EE V L+++GV +++ IEV+NKID +E
Sbjct: 274 STLDEVLQADFLLHVIDISHPSFEEQIAVVRDTLREIGVQHDQI---IEVFNKIDALEEP 330
Query: 428 ----EMGD 431
EMGD
Sbjct: 331 TLLREMGD 338
>gi|384097317|ref|ZP_09998438.1| GTP-binding protein HflX [Imtechella halotolerans K1]
gi|383837285|gb|EID76685.1| GTP-binding protein HflX [Imtechella halotolerans K1]
Length = 407
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 181/328 (55%), Gaps = 39/328 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V+Q + K TF G G +E ++ +N + E+ + + LS QQ+N+ER
Sbjct: 45 VIQRFTQKIDVPNPKTFIGTGKMEEVEIFVN----EHEVGTVIFDDELSPAQQKNIERIL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 KCKILDRTSLILDIFAQRAQTSYARTQVELAQYQYLLPRLT------GLWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + +R + L ++E + + A QR+ R
Sbjct: 149 -----RQRGGIG-MRGPGETEIETDRRIVRDRIALLKKKLETIDKQMATQRSNRG----- 197
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
L VA+VGYTN GKSTL++ ++ S++F++ +LFATLD ++ VV+ LLSDT
Sbjct: 198 ---ALVRVALVGYTNVGKSTLMNVIAKSEVFAENKLFATLDTTVRKVVI-GNLPFLLSDT 253
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI LP QLV++F +TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++
Sbjct: 254 VGFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHPNFEEHIHSVNQILTEIKSAD--- 310
Query: 413 KNMIEVWNKIDYHDEEMGDVEYIDGDDI 440
K I V+NKID ++ ID DD+
Sbjct: 311 KPTIMVFNKIDAYEHLA-----IDEDDL 333
>gi|227431380|ref|ZP_03913431.1| GTP-binding protein HflX [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227352843|gb|EEJ43018.1| GTP-binding protein HflX [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 433
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/358 (36%), Positives = 194/358 (54%), Gaps = 51/358 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A ++D I VN L+ Q RNLE+ V+DR GLI+EIF
Sbjct: 53 TYFGKGKVE----ELGEAVKTYDVDMIVVNDELTPSQIRNLEKTTDATVVDRTGLILEIF 108
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TK AKLQ +LA L Y+ RL R + + + + G+GG GF S
Sbjct: 109 AQRAQTKVAKLQVQLARLQYQLPRL--------RTSMSISLDQQT------GTGGAGFTS 154
Query: 248 -GAGETELQLQRRRILERRSHL---LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G+GET+L+ R+RI + H+ L+ +++ + TR +QR A L VA+V
Sbjct: 155 RGSGETKLEQSRQRITSQMVHVRQELADLDKSKNTRLMQRHAN---------NLPNVALV 205
Query: 304 GYTNAGKSTLVSAL-------SDSD----LFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
GYTNAGKSTL++ L +D+D +F LFATL+ ++ + LP R+ LLSDT
Sbjct: 206 GYTNAGKSTLMNRLLMRFGVGADNDDSKQVFEKDMLFATLNTTVRQLTLPDKRQFLLSDT 265
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+S LP LV AF +TL+E ADL++HV+D + + + T + L ++GV+
Sbjct: 266 VGFVSKLPHNLVAAFKSTLQEAANADLILHVVDVSDEHYKAMMETTEKTLTEIGVTG--- 322
Query: 413 KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDAD 470
K +I V+NK D D D I GD++ S DT S+ ++ I + +D++
Sbjct: 323 KPVITVYNKADRTDLHYPD---ISGDNVITLSAL---DTNSQDALIDLIVKHIFNDSE 374
>gi|58582568|ref|YP_201584.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84624454|ref|YP_451826.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58427162|gb|AAW76199.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84368394|dbj|BAE69552.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 439
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 181/325 (55%), Gaps = 33/325 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL +AL+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGG-SAILADTVGFVRDLPHE 262
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKI
Sbjct: 263 LVAAFRSTLSEARDADLLLHIVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKI 319
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAE 447
D D +V + D I + +R E
Sbjct: 320 DKIDG--AEVRHDAQDGIPDPARRE 342
>gi|310780551|ref|YP_003968883.1| GTP-binding proten HflX [Ilyobacter polytropus DSM 2926]
gi|309749874|gb|ADO84535.1| GTP-binding proten HflX [Ilyobacter polytropus DSM 2926]
Length = 441
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 170/309 (55%), Gaps = 39/309 (12%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K + T+ G G +E I+ + D + + LSGIQ RNLER G ++DR L
Sbjct: 62 KMESSTYMGKGKIEEIRDQ----AIRKNADMVIFDDELSGIQIRNLERIIGVEIIDRTSL 117
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A +KE KLQ ELA L Y+K RL+ G G L S G G G
Sbjct: 118 ILDIFGHRAKSKEGKLQVELAMLKYQKPRLI---GLGGEL-----------SRTGAGIGT 163
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
RG GET+L+L RR I +R S + ++EEV++ R VQR R+R + TVA+
Sbjct: 164 RGL----GETKLELDRRVISKRISDIEKELEEVKKQREVQRKQRKRTS------IPTVAL 213
Query: 303 VGYTNAGKSTLVSALSDSDLFSDAR--------LFATLDPRLKSVVLPSGRKVLLSDTVG 354
VGYTNAGKST+++ L + D R LFATLDP + + L + +L DTVG
Sbjct: 214 VGYTNAGKSTIMNHLMQMEEEEDTRTKSFVKDMLFATLDPFHRKIKLEDNLEFILIDTVG 273
Query: 355 FISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN 414
F+S LP LV++F +TLEEV EA LL++V+D + + + V++++ V +
Sbjct: 274 FVSKLPHDLVESFKSTLEEVEEASLLLYVVDISREDYKHQLKVTRNVVEELNVKDTPF-- 331
Query: 415 MIEVWNKID 423
+ V+NKID
Sbjct: 332 -LVVYNKID 339
>gi|300726794|ref|ZP_07060224.1| GTP-binding proten HflX [Prevotella bryantii B14]
gi|299775907|gb|EFI72487.1| GTP-binding proten HflX [Prevotella bryantii B14]
Length = 415
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 186/343 (54%), Gaps = 22/343 (6%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
L N EE+ Y D F + V V+ + + T+ G G +E IK +I
Sbjct: 18 GLITPNQNEEKTKEYLDELEFLADTAGAVTVKRFTQRVNGPSQVTYVGKGKLEEIKQYIK 77
Query: 144 GAE-SKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAEL 202
E ++ E+ + + L+ Q RN+E G +LDR LI++IF A T AK Q EL
Sbjct: 78 DEEDNEREIGMVIFDDELTAKQIRNIEGELGVKILDRTSLILDIFAMRAQTANAKTQVEL 137
Query: 203 AALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRIL 262
A Y RL R+ E + + G G + G GET+L++ RR IL
Sbjct: 138 AQHRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIIL 188
Query: 263 ERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDL 322
+R + L ++EE+ R ++ QR R R L VA+VGYTN GKST ++ LS S++
Sbjct: 189 QRITLLKKRLEEIDRQQSTQRKNRGR--------LIRVALVGYTNVGKSTTMNLLSKSEV 240
Query: 323 FSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVH 382
F++ +LFATLD ++ VV+ LL+DTVGFI LP LVD+F +TL+E EADLLVH
Sbjct: 241 FAENKLFATLDTTVRKVVV-KNLPFLLADTVGFIRKLPTDLVDSFKSTLDETREADLLVH 299
Query: 383 VLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
V+D + P+ EE V Q L+ +G +++ +MI V+NKID +
Sbjct: 300 VVDISHPDFEEQINVVEQTLKDIGCTDK--PSMI-VFNKIDNY 339
>gi|329895357|ref|ZP_08270982.1| GTP-binding protein HflX [gamma proteobacterium IMCC3088]
gi|328922370|gb|EGG29714.1| GTP-binding protein HflX [gamma proteobacterium IMCC3088]
Length = 428
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 181/303 (59%), Gaps = 31/303 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A TF G G +E I+ + + E + + N L+ Q+RNLER VLDR GLI++
Sbjct: 55 AGTFVGSGKLEEIR----QIKERHEAEIVMFNHALTPSQERNLERVLQCRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLQHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R +L+++++V+R R R +R+R + TV++VGY
Sbjct: 153 LRGPGETQLETDRRLLRARIKSILARLDKVQRQRDQGRRSRKRAE------IPTVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+D+D+++ +LFATLDP L+ + L + +V+L+DTVGFI+ LP +LVD
Sbjct: 207 TNAGKSTLFNHLTDADVYAADQLFATLDPTLRQLELDAIGQVILADTVGFIAHLPHKLVD 266
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF+ATLEE + A+LL V+D + +++ VL VL ++G +K+ + V+NK+D
Sbjct: 267 AFNATLEETLNAELLCIVVDAASDQRDDNLHQVLDVLAEIGA--DKIPRLY-VYNKLDLL 323
Query: 426 DEE 428
++E
Sbjct: 324 EQE 326
>gi|296121964|ref|YP_003629742.1| GTP-binding proten HflX [Planctomyces limnophilus DSM 3776]
gi|296014304|gb|ADG67543.1| GTP-binding proten HflX [Planctomyces limnophilus DSM 3776]
Length = 464
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 169/303 (55%), Gaps = 32/303 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T GPG +E +K + E++ EL IF N + G Q R LE+ G+ ++DR LI++IF
Sbjct: 89 TCLGPGKIEELKLILE--ETRAEL-VIFDNNLTPG-QGRRLEQETGRVIVDRSELILDIF 144
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
HA T EA+LQ ELA L Y ++RL R+ R+ GG G
Sbjct: 145 ATHARTAEARLQVELAQLQYNRTRLKRLWTHLERI-----------------DGGIGASR 187
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +++ RR I +R S L S ++EV + R RR H A V++VGYTN
Sbjct: 188 GPGEKQIETDRRLIDQRISELQSSLKEVEQRRERMVKQRRDH--------ALVSLVGYTN 239
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL+ AL+ +++ +LFATLD + + +P LLSDTVGF+ DLP LV +F
Sbjct: 240 AGKSTLMRALTGEEVYIADQLFATLDTKTRLWKIPGWGDALLSDTVGFVRDLPHSLVASF 299
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TLEE ADLL+HV+D + P E TV VL+++GV +LKN I V NK D +
Sbjct: 300 KSTLEEARHADLLLHVVDASNPEAEAQVATVEAVLEEIGV---ELKNFILVLNKADQVPD 356
Query: 428 EMG 430
M
Sbjct: 357 RMA 359
>gi|410920954|ref|XP_003973948.1| PREDICTED: putative GTP-binding protein 6-like [Takifugu rubripes]
Length = 514
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 206/399 (51%), Gaps = 45/399 (11%)
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
RLF+V P +K + Q L LA ++ G +T L VV + L +
Sbjct: 93 RLFIVHPDVKWGSRKQHLTTAELMLAEAV-----GLVNT------LDNWTVVDSIILSTK 141
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERAWGKPVLDRVG 181
FG G +++ I ++ G + A+FVN LS + + L+ AWG V DR
Sbjct: 142 TPEKKRIFGKGNFQSLTEKIR--QTAG-ITAVFVNVERLSPLSVKELKEAWGVNVFDRYS 198
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
+++ IF +A TKEAKLQ LA + +SRL +V + +G G
Sbjct: 199 VVLHIFRCNAQTKEAKLQISLAEIPLLRSRL----------------RNDVANLDQQG-G 241
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
+I G+GET L++Q+R + ER + S +E++RR R + R+ R+ + V+
Sbjct: 242 RSKYIGGSGETLLEVQQRLLRERELKIRSALEKLRRKRHLLRSQRKH------KEFPVVS 295
Query: 302 VVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
V+GYTN GK+TL+ +L+ DS L +LFATLD + + LP+ VL DT+GF+S LP
Sbjct: 296 VLGYTNCGKTTLIKSLTGDSGLQPKNQLFATLDVTVHAGQLPNHMTVLYVDTIGFLSQLP 355
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
QL+D+F ATLE++ +DLLVHV D + P + VL VL+ + + E L +MIEV N
Sbjct: 356 HQLIDSFSATLEDIKHSDLLVHVRDISHPETVNQKVNVLNVLKNLQIPERLLGSMIEVHN 415
Query: 421 KID------YHDEEMGDVEYIDGDDISNFSRAEDKDTTS 453
KID + D + + +DG + A + + +
Sbjct: 416 KIDLIDNYQFMDPHVLPISALDGRGLDELKMAVEAEIIA 454
>gi|452824147|gb|EME31152.1| GTP-binding protein HflX [Galdieria sulphuraria]
Length = 453
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/317 (40%), Positives = 178/317 (56%), Gaps = 45/317 (14%)
Query: 128 TFFGPGTVETIK----CHINGAESKGELDAIFVNAILSGIQQRNLERAWGK-----PVLD 178
TF G G V I+ C+ E + + + LS QQ+NLER K VLD
Sbjct: 30 TFVGSGKVSEIRSLLVCY--------ECNTVVFDCELSPSQQKNLERKLAKDKQVVNVLD 81
Query: 179 RVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR 238
R LI++IF HA T+E KLQ ELA Y+ RL R+ T E R
Sbjct: 82 RTALILDIFAQHAKTREGKLQVELALNQYRLPRLTRL------WTHLE---------RQS 126
Query: 239 GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
G+GG G + G GET+++ RR + R S L ++E+VR RA QR RR+ +
Sbjct: 127 GAGGVG-LRGPGETQIESDRRLLSSRISQLKGELEDVRSHRARQRKKRRQFE------VP 179
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGR---KVLLSDTVGF 355
V++VGYTNAGKSTL++AL+++ + LFATLDP + LP +L++DTVGF
Sbjct: 180 VVSLVGYTNAGKSTLLNALTNAGVLVQDSLFATLDPTTRRCRLPGLHVHPDILMTDTVGF 239
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
I LP LV AF ATLEE+ AD+L+HV+D ++P+ E + V++VL+++G +E K+M
Sbjct: 240 IQKLPTTLVAAFRATLEEIAAADILLHVVDISSPSSESQQKAVMEVLREIGAAE---KSM 296
Query: 416 IEVWNKIDYHDEEMGDV 432
I VWNKID G +
Sbjct: 297 ITVWNKIDRFQGNTGSI 313
>gi|427387278|ref|ZP_18883334.1| GTP-binding protein HflX [Bacteroides oleiciplenus YIT 12058]
gi|425725657|gb|EKU88527.1| GTP-binding protein HflX [Bacteroides oleiciplenus YIT 12058]
Length = 419
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 183/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLDQAHSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + A+VGYTN GKSTL++ L+ S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------MIRAALVGYTNVGKSTLMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G + K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLADIGAAG---KPMILVFNKIDAY 339
>gi|359428076|ref|ZP_09219118.1| GTP-binding protein HflX [Acinetobacter sp. NBRC 100985]
gi|358236527|dbj|GAB00657.1| GTP-binding protein HflX [Acinetobacter sp. NBRC 100985]
Length = 446
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 182/313 (58%), Gaps = 35/313 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++Q+ S++ K F G G V+ I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILQHISVQRNKPDPKFFIGSGKVDEI------AELVQELEAELVIFDHSLSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G TG
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GFTGNL 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GE++L+ RR I R + L ++ +V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGESQLETDRRLIRVRITQLKEKLIKVQQTRLQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
+ T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + V+L+
Sbjct: 197 ----AAIPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLDWDGIGTVVLA 252
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++PN+ E V VL+++G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVVDSSSPNMLEQIEAVESVLKEIGAD-- 310
Query: 411 KLKNMIEVWNKID 423
++ V+NKID
Sbjct: 311 --APILHVYNKID 321
>gi|188575916|ref|YP_001912845.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520368|gb|ACD58313.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 428
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 181/325 (55%), Gaps = 33/325 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLE+ + V+DR GL
Sbjct: 40 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLEKYLERRVIDRTGL 95
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 96 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 141
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 142 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 192
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL +AL+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +
Sbjct: 193 VGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGG-SAILADTVGFVRDLPHE 251
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKI
Sbjct: 252 LVAAFRSTLSEARDADLLLHIVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKI 308
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAE 447
D D +V + D I + +R E
Sbjct: 309 DKIDG--AEVRHDAQDGIPDPARRE 331
>gi|298207488|ref|YP_003715667.1| GTP-binding protein HflX [Croceibacter atlanticus HTCC2559]
gi|83850124|gb|EAP87992.1| GTP-binding protein HflX [Croceibacter atlanticus HTCC2559]
Length = 407
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 194/357 (54%), Gaps = 34/357 (9%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EEQ Y D F V++ + K TF G +ET++ I E
Sbjct: 24 EEQSKEYLDELEFLTYTAGGEVLKRFTQKLEHPNPKTFINSGKLETVRQFIEEHEVGS-- 81
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
AIF + LS QQ+NLER V+DR LI++IF A T A+ Q ELA Y R
Sbjct: 82 -AIFDDE-LSPAQQKNLERILKCKVVDRTYLILDIFAQRATTSYARTQVELAQYEYLLPR 139
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
LV G T E R GG G + G GETE++ RR + ++ S L ++
Sbjct: 140 LV------GLWTHLE-----------RQRGGIG-MRGPGETEIETDRRIVRDKISLLKNK 181
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
I+++ + VQR R + L VA+VGYTN GKSTL++A+S S++F++ +LFAT
Sbjct: 182 IKKIDKQMEVQRGNRGQ--------LVRVALVGYTNVGKSTLMNAISKSEVFAENKLFAT 233
Query: 332 LDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 391
LD ++ VV+ LL+DTVGFI LP QLV++F +TL+EV EADLL+HV+D + N
Sbjct: 234 LDTTVRKVVI-RNLPFLLTDTVGFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHHNF 292
Query: 392 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAED 448
EEH +V Q+L ++ ++ K I V+NKID ++ E D + +D + + + ED
Sbjct: 293 EEHIASVNQILDEIDSAD---KPSIMVFNKIDAYEPETIDEDDLDTEKTTKHNTLED 346
>gi|402758039|ref|ZP_10860295.1| GTP-binding proten HflX [Acinetobacter sp. NCTC 7422]
Length = 447
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 181/317 (57%), Gaps = 36/317 (11%)
Query: 107 ELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
E+ H++VQ K F G G V+ I + E+ + + + LS Q+R
Sbjct: 41 EILEHLIVQR-----NKPDPKFFIGSGKVDEIAELVKSHEA----ELVIFDHSLSPAQER 91
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLER V+DR GLI++IF A T E KLQ ELA L + +RL+R G
Sbjct: 92 NLERILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GF 141
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
TG E + GG G + G GE++L+ RR I R + L ++ +V++TR RAAR
Sbjct: 142 TGNLE------QQKGGIG-LRGPGESQLETDRRLIRVRITQLKDKLTKVQQTRLQGRAAR 194
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRK 346
++ + T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ +
Sbjct: 195 QK------AAIPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLDWDGVGT 248
Query: 347 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 406
V+L+DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++PN+ E V VL+++G
Sbjct: 249 VVLADTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSPNMPEQIEAVESVLKEIG 308
Query: 407 VSEEKLKNMIEVWNKID 423
+++V+NKID
Sbjct: 309 AD----APVLQVYNKID 321
>gi|289662674|ref|ZP_06484255.1| GTP-binding protein [Xanthomonas campestris pv. vasculorum NCPPB
702]
gi|289669638|ref|ZP_06490713.1| GTP-binding protein [Xanthomonas campestris pv. musacearum NCPPB
4381]
Length = 439
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 211/409 (51%), Gaps = 47/409 (11%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL +AL+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGG-SAILADTVGFVRDLPHE 262
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKI
Sbjct: 263 LVAAFRSTLSEARDADLLLHIVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKI 319
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTS-EPVDVECIDNYGGDDAD----------- 470
D E +V + D I + +R E ++ + +E + + G D
Sbjct: 320 DKI--EGAEVRHDAQDGIPDPARRERVWVSARDGRGLEELQHALGQRLDLRHLTGQLRLP 377
Query: 471 NNDGFVSEDLGE-SMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQP 518
+ G + L + + +N DGWLL D VE E A ED P
Sbjct: 378 PSAGRLRSRLHQLEVVRNEQSDEDGWLLEVD-LPMVEAERLAAGEDGAP 425
>gi|89898550|ref|YP_515660.1| GTP-binding protein [Chlamydophila felis Fe/C-56]
gi|89331922|dbj|BAE81515.1| GTP-binding protein [Chlamydophila felis Fe/C-56]
Length = 452
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 161/273 (58%), Gaps = 22/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFASRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L S
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTS 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ +++ +LFA
Sbjct: 207 DLKAVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYAEDKLFA 260
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLP G++VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPCGQRVLVTDTVGFIRKLPHALVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T +LQ +G+ K +I V NKID
Sbjct: 321 AFEHVETTKGILQDLGIEHPK---IITVLNKID 350
>gi|189468235|ref|ZP_03017020.1| hypothetical protein BACINT_04631 [Bacteroides intestinalis DSM
17393]
gi|189436499|gb|EDV05484.1| GTP-binding protein HflX [Bacteroides intestinalis DSM 17393]
Length = 419
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 182/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I E ++ E
Sbjct: 26 ERKTNEYLDELEFLAETAGAEVVKRFTQKLDQAHSVTYVGKGKLEEIKEYIRSEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R + A+VGYTN GKSTL++ L+ S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------MIRAALVGYTNVGKSTLMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G S K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLADIGASG---KPMILVFNKIDAY 339
>gi|440802114|gb|ELR23053.1| GTPbinding protein HflX, putative [Acanthamoeba castellanii str.
Neff]
Length = 594
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 195/375 (52%), Gaps = 32/375 (8%)
Query: 61 PPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQR--DGYFDTDFFDKELPPHV------ 112
PPR+ +V P ++ + + LA EE++ G D KE V
Sbjct: 131 PPRVCVVHPYMRNTVYADKRKRRLSLLAEREEEEQVCRGQDHPDLRLKEAVALVEALEWP 190
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V + L F G G + ++ ++K + L+ Q + L +
Sbjct: 191 VEDSMYLTVNTVNPSHFLGKGKIAELR---QACQAKRADVVVMDTNSLTPAQGQKLAKML 247
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR LI+EIF A ++E++LQ ELA L YK L ++
Sbjct: 248 GTRVMDRYRLILEIFAQRAQSEESRLQVELAGLAYKSVHL-------------KSAMESK 294
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
A+ RG G F+SGAGET L+++RR ++ R + +++E +++TR + R +R++
Sbjct: 295 HLAQQRGGGA--FLSGAGETNLEIERRHLVVREKKIKARLEVLQKTRKLHRESRKK---- 348
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+ + T+A++GYTNAGKS L++ L + L S +LFA+L ++ + LPSG L +DT
Sbjct: 349 --QDIPTIAILGYTNAGKSALLNRLCGTSLVSQNQLFASLHTFMRKIELPSGCCALAADT 406
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFIS+LP LV FH+TLEE+ AD+L+HV D T E + V +V++++G+ +
Sbjct: 407 VGFISNLPHGLVAPFHSTLEEIGSADVLLHVRDITNAETEMQKANVHKVMKEIGLDTDPD 466
Query: 413 KNMIEVWNKIDYHDE 427
+EVWNKID D+
Sbjct: 467 TQHLEVWNKIDLMDD 481
>gi|257455507|ref|ZP_05620739.1| GTP-binding protein HflX [Enhydrobacter aerosaccus SK60]
gi|257447076|gb|EEV22087.1| GTP-binding protein HflX [Enhydrobacter aerosaccus SK60]
Length = 456
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/316 (39%), Positives = 177/316 (56%), Gaps = 35/316 (11%)
Query: 115 QNPSLKSG---KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
Q +L +G K A F G G E I + E+ D + N L+ Q+RN+ER
Sbjct: 42 QKQALVTGTRSKPDAKYFVGTGKAEEIGELVKQYEA----DIVIFNHSLTPSQERNIERL 97
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
VLDR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 98 VQCRVLDRTGLILDIFAQRARTYEGKLQVELAQLNHLATRLVR----------GWT---- 143
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G + G GET+L+ RR + R L +++++V++TRA RA R++
Sbjct: 144 ---HLERQKGGIG-LRGPGETQLETDRRLLQVRVGQLKAKLDKVKQTRAQGRAKRQK--- 196
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ T+++VGYTNAGKSTL + L+ ++++ +LFATLDP L+SV KV+L D
Sbjct: 197 ---SSVPTISLVGYTNAGKSTLFNTLTHENIYAANQLFATLDPTLRSVSWSGVGKVVLVD 253
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGF+ LP +LV+AFHATLEE +EADLL+HV+D ++ E V VL ++ +
Sbjct: 254 TVGFVRHLPHELVEAFHATLEETLEADLLLHVIDSHREDMHEQIAAVQSVLAEI----DN 309
Query: 412 LKNMIEVWNKIDYHDE 427
++ V+NKID E
Sbjct: 310 QVPVLNVFNKIDLTGE 325
>gi|381337242|ref|YP_005175017.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|356645208|gb|AET31051.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 433
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/358 (36%), Positives = 194/358 (54%), Gaps = 51/358 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A ++D I VN L+ Q RNLE+ V+DR GLI+EIF
Sbjct: 53 TYFGKGKVE----ELGEAVKTYDVDMIVVNDELTPSQIRNLEKTTDATVVDRTGLILEIF 108
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TK AKLQ +LA L Y+ RL R + + + + G+GG GF S
Sbjct: 109 AQRAQTKVAKLQVQLARLQYQLPRL--------RTSMSISLDQQT------GTGGAGFTS 154
Query: 248 -GAGETELQLQRRRILERRSHL---LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G+GET+L+ R+RI + H+ L+ +++ TR++QR A L VA+V
Sbjct: 155 RGSGETKLEQSRQRITSQMVHVRQELADLDKSENTRSMQRHAN---------NLPNVALV 205
Query: 304 GYTNAGKSTLVSAL-------SDSD----LFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
GYTNAGKSTL++ L +D+D +F LFATL+ ++ + LP R+ LLSDT
Sbjct: 206 GYTNAGKSTLMNRLLMRFGVGADNDDSKQVFEKDMLFATLNTTVRQLTLPDKRQFLLSDT 265
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+S LP LV AF +TL+E ADL++HV+D + + + T Q L ++GV+
Sbjct: 266 VGFVSKLPHNLVAAFKSTLQEAANADLILHVVDVSDEHYKAMMETTEQTLTEIGVTG--- 322
Query: 413 KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDAD 470
K +I V+NK D + D I GD++ S DT S+ ++ I + +D++
Sbjct: 323 KPVITVYNKADRTELHYPD---ISGDNVITLSAL---DTNSQDALIDLIVKHIFNDSE 374
>gi|124267179|ref|YP_001021183.1| GTP-binding protein [Methylibium petroleiphilum PM1]
gi|124259954|gb|ABM94948.1| putative GTP-binding protein [Methylibium petroleiphilum PM1]
Length = 414
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 172/307 (56%), Gaps = 37/307 (12%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + +K + AES G+ + + LS QQRNLER G VLDR GLI+E
Sbjct: 56 AALFLGSGKADELKALV--AESGGQ--CVIFDQALSPTQQRNLERHLGVEVLDRTGLILE 111
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A A + E KLQ ELA L Y +RLVR R T E V
Sbjct: 112 IFAARAQSHEGKLQVELAQLQYLSNRLVR------RWTHLERQRGGVGHR---------- 155
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GE +++L RR I ER L +++++V+R R QR +R R G V+++GY
Sbjct: 156 -GGPGERQIELDRRMIGERIKALKARLDKVKRQRGTQRRSRERAGTF------RVSLIGY 208
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-RKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL + ++ +LFATLD + + L R V LSDTVGFI DLP LV
Sbjct: 209 TNAGKSTLFNALVKARSYAADQLFATLDTTTRQLYLEDAQRSVSLSDTVGFIRDLPHTLV 268
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV---GVSEEKLKNMIEVWNK 421
AF ATL+E +ADLL+HV+D ++P L E R V +VL ++ G+ + I V+NK
Sbjct: 269 KAFAATLQEAADADLLLHVVDASSPVLAEQRVEVERVLAEIDAAGIPQ------ILVYNK 322
Query: 422 IDYHDEE 428
+D DEE
Sbjct: 323 LDQLDEE 329
>gi|358011368|ref|ZP_09143178.1| GTP-binding protein [Acinetobacter sp. P8-3-8]
Length = 443
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 176/322 (54%), Gaps = 37/322 (11%)
Query: 107 ELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
E+ H+ VQ K A F G G E I + + E++ + + LS Q+R
Sbjct: 41 EIFEHLTVQRV-----KPDAKFFIGTGKAEEIAERV----TNEEIELVIFDQALSPAQER 91
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLER V+DR GLI++IF A T E KLQ ELA L + SRLVR R
Sbjct: 92 NLERILKCRVIDRTGLILDIFAQRARTHEGKLQVELAQLDHLSSRLVRSR---------- 141
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
S GG G + G GET L+ RR + R L ++E+VR+TR RAAR
Sbjct: 142 -------SNLDSQKGGIG-LRGPGETLLETDRRLLRIRMEQLKDRLEKVRKTRTQGRAAR 193
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRK 346
++ + TV++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ +
Sbjct: 194 QKAN------IPTVSLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLDWEGIGT 247
Query: 347 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 406
++L+DTVGF+ +L LV++F ATLEE +EA LL+H++D +P + E V VL ++G
Sbjct: 248 LVLADTVGFVRNLAHSLVESFKATLEETLEATLLLHIIDSNSPEMMEQIEAVETVLNEIG 307
Query: 407 VSEEKLKNMIEVWNKIDYHDEE 428
L+ V+NKID EE
Sbjct: 308 ADIPTLR----VYNKIDQSGEE 325
>gi|160885086|ref|ZP_02066089.1| hypothetical protein BACOVA_03084 [Bacteroides ovatus ATCC 8483]
gi|293368751|ref|ZP_06615355.1| GTP-binding protein HflX [Bacteroides ovatus SD CMC 3f]
gi|423292207|ref|ZP_17270817.1| GTP-binding protein HflX [Bacteroides ovatus CL02T12C04]
gi|156109436|gb|EDO11181.1| GTP-binding protein HflX [Bacteroides ovatus ATCC 8483]
gi|292636056|gb|EFF54544.1| GTP-binding protein HflX [Bacteroides ovatus SD CMC 3f]
gi|392662216|gb|EIY55781.1| GTP-binding protein HflX [Bacteroides ovatus CL02T12C04]
Length = 419
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 183/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F E VV+ + K A + T+ G G +E I+ +I+ E ++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIRQYIHDEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTMMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LV++F +TL+EV EADLLVHV+D + P
Sbjct: 249 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVESFKSTLDEVREADLLVHVVDISHPG 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L ++G S K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLAEIGGSG---KPMILVFNKIDAY 339
>gi|406838722|ref|ZP_11098316.1| GTP-binding proten HflX [Lactobacillus vini DSM 20605]
Length = 416
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 168/305 (55%), Gaps = 35/305 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+ G G V + I ++ +A+ VNA LS Q RN+E PV+DR LI+E
Sbjct: 47 AGTYLGSGKVAELAAAIQANQA----EALLVNAQLSPTQLRNIESLVKVPVIDRTELILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF+ A TK A+LQ E+A L Y+ RL RV G F + + + GG+G
Sbjct: 103 IFSRRAQTKRAQLQVEIARLKYQLPRL-RVSG------FNKLDQ--------QNGGGQGA 147
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GAGET+ +L +R + +R + L Q++E+ + Q AR+R GL +VA+VGY
Sbjct: 148 NRGAGETQHELTKRTLQKRITQLTHQLQELATEQTTQSRARKR------SGLPSVALVGY 201
Query: 306 TNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
TNAGKST + L + + +LFATLD ++ + P + +LLSDTVGFIS
Sbjct: 202 TNAGKSTTFNGLVKLFGEKTAHQVLVKDQLFATLDTSIRRLTFPDQKALLLSDTVGFISQ 261
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP L++AF TLE V++ADLLV V+DC+ P ++ Q LQ++G MI
Sbjct: 262 LPADLLEAFKTTLETVLDADLLVQVVDCSHPEHQKMIAATNQTLQEIGADAIP---MIYA 318
Query: 419 WNKID 423
+N+ D
Sbjct: 319 YNQAD 323
>gi|254555913|ref|YP_003062330.1| GTPase [Lactobacillus plantarum JDM1]
gi|254044840|gb|ACT61633.1| GTPase [Lactobacillus plantarum JDM1]
Length = 431
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 169/303 (55%), Gaps = 30/303 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TFFG G V IK + +L + +NA L+ Q RNLE ++DR GLI+EIF
Sbjct: 57 TFFGKGKVVEIK----EVAAANDLHIMVINADLTPSQVRNLEEQTDIQIIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL R + + + +A G G G
Sbjct: 113 GNRARSKEAKLQVKIAQLQYQLPRL--------RTSISNRLDQQAGAAAGGGGGFTN--R 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR I +R SH +++E+ + V+R+ R D GL VA+VGYTN
Sbjct: 163 GAGETQLELNRRTIQDRISHAKHELKELNKDEVVRRSQR------DKAGLPNVALVGYTN 216
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++ L D +F LFATLD ++ + P +++LLSDTVGF+SDLP
Sbjct: 217 AGKSTTMNGLVKLFGKGEDKQVFEKDMLFATLDTSIRQLTFPDNKQLLLSDTVGFVSDLP 276
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
L++AF +TL E ADLL+ V+D P+ +E T + L+++GV + MI +N
Sbjct: 277 HNLINAFRSTLAEAANADLLIQVIDYADPHYKEMMATTEKTLKEIGVHDVP---MIYAFN 333
Query: 421 KID 423
K D
Sbjct: 334 KAD 336
>gi|319901061|ref|YP_004160789.1| GTP-binding proten HflX [Bacteroides helcogenes P 36-108]
gi|319416092|gb|ADV43203.1| GTP-binding proten HflX [Bacteroides helcogenes P 36-108]
Length = 418
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 183/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K +A + T+ G G + IK +I N E++ E
Sbjct: 26 ERRTNEYLDELAFLAETAGAEVVKRFTQKLDQANSVTYVGTGKLAEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ R ++ QR R R + VA+VGYTN GKSTL++ L+ S++F++ +LFA
Sbjct: 197 RLAEIDRQKSTQRKNRGR--------MIRVALVGYTNVGKSTLMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVII-ENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G + K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLADIGAAG---KPMILVFNKIDAY 339
>gi|391230743|ref|ZP_10266949.1| GTP-binding protein HflX [Opitutaceae bacterium TAV1]
gi|391220404|gb|EIP98824.1| GTP-binding protein HflX [Opitutaceae bacterium TAV1]
Length = 435
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 185/340 (54%), Gaps = 35/340 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G E + + + D I ++ LS QQRN E+ G V+DR +I++IF
Sbjct: 67 TLLGSGKTEELIAR----AKELDCDLIVIDDHLSPAQQRNWEKLSGIAVIDREEVILDIF 122
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T+EA LQ LA + Y RL R A +R RG G +
Sbjct: 123 ADRAQTREAVLQVALARMEYSLPRLTR---------------AWTHLSRQRGKG---KMG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R + L ++ EVR+ R VQR R+R + T A+VGYTN
Sbjct: 165 GEGETQLEQDRRLVRDRITRLKKELGEVRKQRGVQRHKRQR------VPVPTAAIVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKS+L++ L+ S + ++ +LFATLDP + +VL +K+L++DTVGFI LP LV+AF
Sbjct: 219 AGKSSLINTLTGSSVLAEDKLFATLDPTTRQLVLRGNQKLLVTDTVGFIRRLPHGLVEAF 278
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEE + AD L+HVLD TAPN+ H T L VL ++G E K ++ V+NK+D DE
Sbjct: 279 KATLEEALVADFLIHVLDVTAPNVAAHHATTLAVLGELGADE---KRILTVFNKVDAADE 335
Query: 428 -EMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGG 466
+ +D D I F A D VD C+D G
Sbjct: 336 PHLARARQLDRDGI--FLSARTGDGVPALVD-HCLDLIAG 372
>gi|431931711|ref|YP_007244757.1| GTP-binding protein HflX [Thioflavicoccus mobilis 8321]
gi|431830014|gb|AGA91127.1| GTP-binding protein HflX [Thioflavicoccus mobilis 8321]
Length = 445
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 173/309 (55%), Gaps = 31/309 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E +K + AE D + N +LS QQRNLER G+ V+DR GLI++
Sbjct: 54 ARLFIGSGKAEELKGLV-AAEGA---DLVIFNHVLSPAQQRNLERELGRRVVDRTGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARSFEGKLQVELAQLEHLATRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + +R + L ++ + R R ARR+ L VA+VGY
Sbjct: 152 LRGPGETQLETDRRLLDKRIAVLKRRLARIGAQRDQGRRARRKAE------LPAVALVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ + ++ +LFATLDP L+ + LPSG+ V ++DTVGF+SDLP +LV
Sbjct: 206 TNAGKSTLFNRLTGAGVYQADQLFATLDPTLRRLPLPSGQVVTVADTVGFVSDLPHELVA 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATLEE A+LL+HV+D A + V VL ++G + ++V NKID
Sbjct: 266 AFRATLEETRSAELLLHVIDAAAATRDRQIEDVTAVLAEIGA---EAVPQLQVMNKIDLL 322
Query: 426 DEEMGDVEY 434
++ M VEY
Sbjct: 323 EDAMPRVEY 331
>gi|78047325|ref|YP_363500.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|294665636|ref|ZP_06730913.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|78035755|emb|CAJ23446.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|292604582|gb|EFF47956.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 439
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 180/325 (55%), Gaps = 33/325 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +
Sbjct: 204 VGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGG-SAILADTVGFVRDLPHE 262
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKI
Sbjct: 263 LVAAFRSTLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKI 319
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAE 447
D E +V + D I + +R E
Sbjct: 320 DKI--EGAEVRHDAQDGIPDPARRE 342
>gi|384419692|ref|YP_005629052.1| GTP-binding protein [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353462605|gb|AEQ96884.1| GTP-binding protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 439
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 181/325 (55%), Gaps = 33/325 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHVATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL +AL+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGG-SAILADTVGFVRDLPHE 262
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKI
Sbjct: 263 LVAAFRSTLSEARDADLLLHIVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKI 319
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAE 447
D D +V + D I + +R E
Sbjct: 320 DKIDG--AEVRHDAQDGIPDPARRE 342
>gi|300767708|ref|ZP_07077618.1| GTP-binding protein HflX [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308179890|ref|YP_003924018.1| GTPase [Lactobacillus plantarum subsp. plantarum ST-III]
gi|380031861|ref|YP_004888852.1| GTPase, HflX subfamily [Lactobacillus plantarum WCFS1]
gi|300494693|gb|EFK29851.1| GTP-binding protein HflX [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045381|gb|ADN97924.1| GTPase [Lactobacillus plantarum subsp. plantarum ST-III]
gi|342241104|emb|CCC78338.1| GTPase, HflX subfamily [Lactobacillus plantarum WCFS1]
Length = 431
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 169/303 (55%), Gaps = 30/303 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TFFG G V IK + +L + +NA L+ Q RNLE ++DR GLI+EIF
Sbjct: 57 TFFGKGKVVEIK----EVAAANDLHIMVINADLTPSQVRNLEEQTDIQIIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL R + + + +A G G G
Sbjct: 113 GNRARSKEAKLQVKIAQLQYQLPRL--------RTSISNRLDQQAGAAAGGGGGFTN--R 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR I +R SH +++E+ + V+R+ R D GL VA+VGYTN
Sbjct: 163 GAGETQLELNRRTIQDRISHAKHELKELNKDEVVRRSQR------DKAGLPNVALVGYTN 216
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++ L D +F LFATLD ++ + P +++LLSDTVGF+SDLP
Sbjct: 217 AGKSTTMNGLVKLFGKGEDKQVFEKDMLFATLDTSIRQLTFPDNKQLLLSDTVGFVSDLP 276
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
L++AF +TL E ADLL+ V+D P+ +E T + L+++GV + MI +N
Sbjct: 277 HNLINAFRSTLAEAANADLLIQVIDYADPHYKEMMATTEKTLKEIGVHDVP---MIYAFN 333
Query: 421 KID 423
K D
Sbjct: 334 KAD 336
>gi|346724666|ref|YP_004851335.1| GTP-binding protein [Xanthomonas axonopodis pv. citrumelo F1]
gi|346649413|gb|AEO42037.1| GTP-binding protein [Xanthomonas axonopodis pv. citrumelo F1]
Length = 439
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 180/325 (55%), Gaps = 33/325 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +
Sbjct: 204 VGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGG-SAILADTVGFVRDLPHE 262
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKI
Sbjct: 263 LVAAFRSTLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKI 319
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAE 447
D E +V + D I + +R E
Sbjct: 320 DKI--EGAEVRHDAQDGIPDPARRE 342
>gi|333902281|ref|YP_004476154.1| GTP-binding proten HflX [Pseudomonas fulva 12-X]
gi|333117546|gb|AEF24060.1| GTP-binding proten HflX [Pseudomonas fulva 12-X]
Length = 433
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 175/306 (57%), Gaps = 31/306 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ + + A G G VE ++ + E+ D + N +L+ Q+RNLER + VL
Sbjct: 47 SVPNSRPTAKFLIGSGKVEELRDQVKAHEA----DLVIFNHVLTPSQERNLERMFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLDHMSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQKLEKVRSQREQARRGRKRAD------I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
+V++VGYTNAGKSTL +AL++S++++ +LFATLDP L+ + L V+L+DTVGFI
Sbjct: 199 PSVSLVGYTNAGKSTLFNALTESEVYAADQLFATLDPTLRRLQLDDLGPVVLADTVGFIR 258
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV+AF ATLEE +DLL+HV+D P + VL+VL ++G + ++E
Sbjct: 259 HLPHKLVEAFRATLEESSNSDLLLHVIDSHEPERDAQIEQVLEVLGEIGAQD---LPVLE 315
Query: 418 VWNKID 423
V+NK+D
Sbjct: 316 VYNKLD 321
>gi|302392990|ref|YP_003828810.1| GTP-binding proten HflX [Acetohalobium arabaticum DSM 5501]
gi|302205067|gb|ADL13745.1| GTP-binding proten HflX [Acetohalobium arabaticum DSM 5501]
Length = 606
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 175/295 (59%), Gaps = 34/295 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G V+ +K + + ++ I + LS QQRNLE G V+DR +I++IF
Sbjct: 242 YIGYGKVQELK----ELKYRLGINVIIFDEELSPAQQRNLEDELGVKVIDRTEVILDIFA 297
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA++KE KLQ ELA L Y RL TG+ E +S G G RG
Sbjct: 298 QHANSKEGKLQVELAQLHYLLPRL--------------TGKGEDLSRLAGGIGTRG---- 339
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L++ RRRI +R +L ++I V++TRA QR+ R+ L T+++VGYTNA
Sbjct: 340 PGESKLEIDRRRIRKRIDNLEAEINRVQQTRATQRSRRK---------LPTISLVGYTNA 390
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++ L+++ + LFATLD + LP GRKVL+SDTVGFI LP QL+ AF
Sbjct: 391 GKSTLLNRLTEATAVTKDELFATLDSNTCRLKLPVGRKVLISDTVGFIRKLPHQLIAAFR 450
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEEV EAD+L+HV+D T + + V++VL ++ V + K +I + NKID
Sbjct: 451 ATLEEVTEADILLHVVDVTEADYKAKMDAVVEVLSELNVLD---KPIITILNKID 502
>gi|390556625|ref|ZP_10243046.1| putative GTP-binding protein ynbA [Nitrolancetus hollandicus Lb]
gi|390174793|emb|CCF82329.1| putative GTP-binding protein ynbA [Nitrolancetus hollandicus Lb]
Length = 463
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 26/272 (9%)
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D + V+ L Q RNLE A V+DR LI++IF A T E +LQ ELA L Y+ R
Sbjct: 109 DVVLVDDELPPAQLRNLEEALEVKVIDRTALILDIFARRAQTHEGRLQVELAQLEYRLPR 168
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L R+ R G G + G GET+L+ RR+ +R + + Q
Sbjct: 169 LTRMWTHLSRQAVGGVG-----------------LRGPGETQLEADRRQARQRIAFIKQQ 211
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
++EV R R + R R++ + VA+VGYTNAGKSTL++ L+ + + ++ +LFAT
Sbjct: 212 LDEVHRHRQLYRERRQKEN------IPIVALVGYTNAGKSTLLNTLAGASVLAEDKLFAT 265
Query: 332 LDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 391
LDP + + LP G VL++DTVGFI+ LP L+ AF ATLEE++EA +LVHVLD T P
Sbjct: 266 LDPTTRRIELPGGHHVLVTDTVGFINKLPTLLIAAFRATLEEILEAAVLVHVLDVTHPKS 325
Query: 392 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
E TV QV++++G + + +I NKID
Sbjct: 326 AEQAETVRQVIEELGADD---RPVITALNKID 354
>gi|333398839|ref|ZP_08480652.1| GTP-binding protein HflX [Leuconostoc gelidum KCTC 3527]
gi|406600595|ref|YP_006745941.1| GTP-binding protein HflX [Leuconostoc gelidum JB7]
gi|406372130|gb|AFS41055.1| GTP-binding protein HflX [Leuconostoc gelidum JB7]
Length = 432
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 174/308 (56%), Gaps = 39/308 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A ++D I N LS Q RNLE+A VLDR GLI++IF
Sbjct: 59 TYFGKGKVE----ELAEAVKTYDVDMIVANDELSPSQIRNLEKATNATVLDRTGLILDIF 114
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ +LA L Y+ RL R + + + + GSGG GF S
Sbjct: 115 AQRAQTKEAKLQVQLARLQYQLPRL--------RTSMSVSLDQQT------GSGGSGFTS 160
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G+GET+L+ RRRI + H+ + ++++ R+ARR+ L VA+VGYT
Sbjct: 161 RGSGETKLEESRRRITAQMVHIRQDLSDLKKGDTT-RSARRQEND-----LPNVALVGYT 214
Query: 307 NAGKSTLVSAL-------SDS----DLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
NAGKSTL++ L SD+ +F LFATL+ ++ + LP ++ LLSDTVGF
Sbjct: 215 NAGKSTLMNRLLERFGVGSDTADSKQVFEKDMLFATLNTTVRQLTLPDKKQFLLSDTVGF 274
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
+S LP LV AF +TL+E ADLL+HV+D + + ++ T + L +VG+++ M
Sbjct: 275 VSKLPHNLVAAFQSTLQEAANADLLLHVVDVSDEHHKDMMATTEKTLSEVGITDIP---M 331
Query: 416 IEVWNKID 423
I ++NK D
Sbjct: 332 ITIYNKAD 339
>gi|300173994|ref|YP_003773160.1| GTP-binding protein HflX [Leuconostoc gasicomitatum LMG 18811]
gi|299888373|emb|CBL92341.1| GTP-binding protein HflX [Leuconostoc gasicomitatum LMG 18811]
Length = 432
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 174/308 (56%), Gaps = 39/308 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A ++D I N LS Q RNLE+A VLDR GLI++IF
Sbjct: 59 TYFGKGKVE----ELAEAVKSYDVDMIVANDELSPSQIRNLEKATNATVLDRTGLILDIF 114
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ +LA L Y+ RL R + + + + GSGG GF S
Sbjct: 115 AQRAQTKEAKLQVQLARLQYQLPRL--------RTSMSISLDQQT------GSGGSGFTS 160
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G+GET+L+ RRRI + H+ + ++++ R+ARR+ L VA+VGYT
Sbjct: 161 RGSGETKLEESRRRITAQMVHIRQDLSDLKKGDTT-RSARRQEND-----LPNVALVGYT 214
Query: 307 NAGKSTLVSAL----------SDS-DLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
NAGKSTL++ L +DS +F LFATL+ ++ + LP ++ LLSDTVGF
Sbjct: 215 NAGKSTLMNRLLERFGVGSNTADSKQVFEKDMLFATLNTTVRQLTLPDKKQFLLSDTVGF 274
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
+S LP LV AF +TL+E ADLL+HV+D + + ++ T + L +VG+++ M
Sbjct: 275 VSKLPHNLVAAFQSTLQEAANADLLLHVVDVSDEHHKDMMATTEKTLSEVGITDIP---M 331
Query: 416 IEVWNKID 423
I ++NK D
Sbjct: 332 ITIYNKAD 339
>gi|373501011|ref|ZP_09591379.1| GTP-binding protein HflX [Prevotella micans F0438]
gi|371950863|gb|EHO68715.1| GTP-binding protein HflX [Prevotella micans F0438]
Length = 415
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 179/330 (54%), Gaps = 23/330 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + G A T+ G G +E IK I E + E + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVGGPSAVTYVGKGKLEEIKNFIKLKEDEEEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E G +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQLRNIENELGIKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R L VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKITQRKNRGR--------LIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+H++D + P+ EE
Sbjct: 255 RKVVV-ENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDFEEQIQ 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKID-YH 425
V Q L + SE K M+ V+NKID YH
Sbjct: 314 VVNQTLTDLDSSE---KPMMIVFNKIDNYH 340
>gi|78485431|ref|YP_391356.1| small GTP-binding protein domain-containing protein [Thiomicrospira
crunogena XCL-2]
gi|78363717|gb|ABB41682.1| Conserved hypothetical protein with a GTPase domain [Thiomicrospira
crunogena XCL-2]
Length = 436
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 170/295 (57%), Gaps = 32/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E IK + ++ D + VN LS Q+RNL + VLDRVGLI++IF
Sbjct: 61 FIGKGKAEEIKAAVETHQA----DVVIVNHALSPAQERNLSQFLDCQVLDRVGLILDIFA 116
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L +RLV+ G + + R G G RG
Sbjct: 117 QRARSHEGKLQVELAQLKRMSTRLVK-------------GWSHL--DRQGGIGARG---- 157
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + + L ++IE+VR+ R++ R +R++ SD L T+ ++GYTNA
Sbjct: 158 PGETQLETDRRLVQGKIKQLEARIEKVRQQRSLGRRSRKK---SD---LPTITIIGYTNA 211
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + ++ + ++++ RLFATLD L+ V LP V+ +DTVGFI +P LV AF
Sbjct: 212 GKSTLFNQMTRASVYAEDRLFATLDSTLRKVHLPGAGPVIFADTVGFIRHIPHDLVAAFR 271
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TLEE EADLL+H++D P+ E T V +V+++VG + + V+NKID
Sbjct: 272 STLEETSEADLLIHLVDAADPHRAEKMTDVEEVIKEVGAED---VPQLTVFNKID 323
>gi|406035368|ref|ZP_11042732.1| GTPase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 448
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 180/311 (57%), Gaps = 31/311 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
++++ S++ K F G G V+ I + E+ + + + LS Q+RNLE+
Sbjct: 42 ILEHISVQRNKPDPKFFIGSGKVDEIAEQVKDLEA----ELVIFDHSLSPAQERNLEKVL 97
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI++IF A T E KLQ ELA L + +RL+R G TG E
Sbjct: 98 KCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GFTGNLE- 146
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+ GG G + G GE++L+ RR I R + L ++ +V++TR RAAR++
Sbjct: 147 -----QQKGGIG-LRGPGESQLETDRRLIRVRITQLKEKLVKVQQTRLQGRAARQK---- 196
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+ T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + V+L+DT
Sbjct: 197 --AAIPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLDWDGIGTVVLADT 254
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+ +L LV++F ATLEE +EA LL+HV+D ++PN+ E V VL+++G
Sbjct: 255 VGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSPNMTEQIEAVESVLKEIGAD---- 310
Query: 413 KNMIEVWNKID 423
++ V+NKID
Sbjct: 311 APVLHVYNKID 321
>gi|296111471|ref|YP_003621853.1| GTPase [Leuconostoc kimchii IMSNU 11154]
gi|295833003|gb|ADG40884.1| GTPase [Leuconostoc kimchii IMSNU 11154]
Length = 432
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 172/308 (55%), Gaps = 39/308 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A E+D I N LS Q RNLE+A VLDR GLI++IF
Sbjct: 59 TYFGKGKVE----ELAEAVKTYEVDMIVANDELSPSQIRNLEKATQATVLDRTGLILDIF 114
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ +LA L Y+ RL R + + + + G+GG GF S
Sbjct: 115 AQRAQTKEAKLQVQLARLQYQLPRL--------RTSMSVSLDQQT------GAGGGGFTS 160
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L+ RRRI + H+ + ++ T+ A +RH L VA+VGYT
Sbjct: 161 RGAGETKLEESRRRITAQMVHIRQDLADL--TKGETTRASKRHTND----LPNVALVGYT 214
Query: 307 NAGKSTLVSAL-------SDSD----LFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
NAGKSTL++ L +D+D +F LFATL+ ++ + LP ++ LLSDTVGF
Sbjct: 215 NAGKSTLMNRLLERFGVGADNDESKQVFEKDMLFATLNTTIRQLTLPDKKQFLLSDTVGF 274
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
+S LP LV AF +TL+E ADLL+ V+D + + +E T + L +VGVS+ M
Sbjct: 275 VSKLPHNLVAAFKSTLQEAAHADLLLQVVDISDEHYKEMMATTEKTLAEVGVSDVP---M 331
Query: 416 IEVWNKID 423
I ++NK D
Sbjct: 332 ITIYNKAD 339
>gi|21242485|ref|NP_642067.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306]
gi|381169483|ref|ZP_09878648.1| GTP-binding protein HflX [Xanthomonas citri pv. mangiferaeindicae
LMG 941]
gi|418517991|ref|ZP_13084146.1| GTP-binding protein [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|21107933|gb|AAM36603.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306]
gi|380690073|emb|CCG35135.1| GTP-binding protein HflX [Xanthomonas citri pv. mangiferaeindicae
LMG 941]
gi|410705352|gb|EKQ63827.1| GTP-binding protein [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 439
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 170/301 (56%), Gaps = 31/301 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +
Sbjct: 204 VGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGG-SAILADTVGFVRDLPHE 262
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKI
Sbjct: 263 LVAAFRSTLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKI 319
Query: 423 D 423
D
Sbjct: 320 D 320
>gi|418519792|ref|ZP_13085843.1| GTP-binding protein [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410704452|gb|EKQ62934.1| GTP-binding protein [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
Length = 439
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 170/301 (56%), Gaps = 31/301 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +
Sbjct: 204 VGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGG-SAILADTVGFVRDLPHE 262
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKI
Sbjct: 263 LVAAFRSTLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKI 319
Query: 423 D 423
D
Sbjct: 320 D 320
>gi|71064931|ref|YP_263658.1| GTP - binding protein, phage lambda cII repressor [Psychrobacter
arcticus 273-4]
gi|71037916|gb|AAZ18224.1| probable GTP - binding protein, possible phage lambda cII repressor
[Psychrobacter arcticus 273-4]
Length = 489
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/307 (41%), Positives = 177/307 (57%), Gaps = 34/307 (11%)
Query: 123 KARADT--FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
+AR D F G G E I + ++ D + N LS Q+RN+E VLDR
Sbjct: 51 RARPDARYFVGSGKAEEIAELVREHDA----DIVLFNHSLSPSQERNIEALVQCRVLDRT 106
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLI++IF A T E KLQ ELA L + +RLVR G T R
Sbjct: 107 GLILDIFAQRARTYEGKLQVELAQLNHLSTRLVR----------GWT-------HLERQK 149
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG G + G GET+L+ RR + R L S+IE+VR+TRA RA R++ SD + T+
Sbjct: 150 GGIG-LRGPGETQLETDRRLLQVRVMQLKSRIEKVRQTRAQGRARRQK---SD---VPTI 202
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
++VGYTNAGKSTL + L D ++++ +LFATLDP L+ + +V+L DTVGF+ LP
Sbjct: 203 SLVGYTNAGKSTLFNRLVDENIYAADKLFATLDPTLRRLDWQGVGRVVLVDTVGFVRHLP 262
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
+LV++FHATLEE +EADLL+HV+D ++ ++ E V VL ++ + ++ V+N
Sbjct: 263 HELVESFHATLEETLEADLLLHVIDSSSEDMHEQIQAVKDVLAEI----DNDVPVLNVYN 318
Query: 421 KIDYHDE 427
KID DE
Sbjct: 319 KIDLTDE 325
>gi|366163885|ref|ZP_09463640.1| small GTP-binding protein [Acetivibrio cellulolyticus CD2]
Length = 619
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/299 (39%), Positives = 168/299 (56%), Gaps = 31/299 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + C I A ++D I + LSG Q RN+E G V+DR LI++IF
Sbjct: 260 YIGRGKLEEL-CLIRQAL---DIDLIVFDDELSGAQLRNIEELVGIKVIDRTTLILDIFA 315
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE KLQ ELA L Y+ SRL+ + RL G
Sbjct: 316 QRARSKEGKLQVELAQLKYRVSRLIGLGNQLSRLGGGIGTRG------------------ 357
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE +L++ RR I R S+L S++ EV + R R +R R L VA+VGYTNA
Sbjct: 358 PGEKKLEVDRRHIRRRISYLESELSEVEKRRGFMRKSRDRDS------LPVVALVGYTNA 411
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++ L SD+ ++ +LFATLDP +++ LP+GR+ LL DTVGFI LP +L+++F
Sbjct: 412 GKSTLMNTLCKSDVLAEDKLFATLDPTARNLKLPNGREALLIDTVGFIRKLPHELIESFK 471
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TLEE V AD+L+HV+D T+ +E V +L +G S K ++ NK+D +E
Sbjct: 472 STLEEAVYADVLIHVVDVTSYEAQEQIEVVDNILNALGASS---KPIVMALNKVDMLEE 527
>gi|390989118|ref|ZP_10259418.1| GTP-binding protein HflX [Xanthomonas axonopodis pv. punicae str.
LMG 859]
gi|372556152|emb|CCF66393.1| GTP-binding protein HflX [Xanthomonas axonopodis pv. punicae str.
LMG 859]
Length = 429
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 170/301 (56%), Gaps = 31/301 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GL
Sbjct: 40 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGL 95
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 96 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 141
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 142 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 192
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +
Sbjct: 193 VGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGG-SAILADTVGFVRDLPHE 251
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKI
Sbjct: 252 LVAAFRSTLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKI 308
Query: 423 D 423
D
Sbjct: 309 D 309
>gi|294626633|ref|ZP_06705230.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292599053|gb|EFF43193.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 439
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 179/325 (55%), Gaps = 33/325 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQRRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +
Sbjct: 204 VGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGG-SAILADTVGFVRDLPHE 262
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKI
Sbjct: 263 LVAAFRSTLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKI 319
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAE 447
D E +V + D I + +R E
Sbjct: 320 DKI--EGAEVRHDAQDGIPDPARRE 342
>gi|237718237|ref|ZP_04548718.1| GTP-binding protein [Bacteroides sp. 2_2_4]
gi|299147788|ref|ZP_07040851.1| GTP-binding protein HflX [Bacteroides sp. 3_1_23]
gi|423297074|ref|ZP_17275144.1| GTP-binding protein HflX [Bacteroides ovatus CL03T12C18]
gi|229452421|gb|EEO58212.1| GTP-binding protein [Bacteroides sp. 2_2_4]
gi|298513971|gb|EFI37857.1| GTP-binding protein HflX [Bacteroides sp. 3_1_23]
gi|392668355|gb|EIY61855.1| GTP-binding protein HflX [Bacteroides ovatus CL03T12C18]
Length = 420
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 183/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F E VV+ + K A + T+ G G +E I+ +I+ E ++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIRQYIHDEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTMMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LV++F +TL+EV EADLLVHV+D + P
Sbjct: 249 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVESFKSTLDEVREADLLVHVVDISHPG 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L ++G S K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLAEIGGSG---KPMILVFNKIDAY 339
>gi|93005226|ref|YP_579663.1| HSR1-like GTP-binding protein [Psychrobacter cryohalolentis K5]
gi|92392904|gb|ABE74179.1| GTP-binding protein, HSR1-related protein [Psychrobacter
cryohalolentis K5]
Length = 489
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/307 (41%), Positives = 177/307 (57%), Gaps = 34/307 (11%)
Query: 123 KARADT--FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
+AR D F G G E I + ++ D + N LS Q+RN+E VLDR
Sbjct: 51 RARPDARYFVGSGKAEEIAELVREHDA----DIVLFNHSLSPSQERNIEALVQCRVLDRT 106
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLI++IF A T E KLQ ELA L + +RLVR G T R
Sbjct: 107 GLILDIFAQRARTYEGKLQVELAQLNHLSTRLVR----------GWT-------HLERQK 149
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG G + G GET+L+ RR + R L S+IE+VR+TRA RA R++ SD + T+
Sbjct: 150 GGIG-LRGPGETQLETDRRLLQVRVMQLKSRIEKVRQTRAQGRARRQK---SD---VPTI 202
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
++VGYTNAGKSTL + L D ++++ +LFATLDP L+ + +V+L DTVGF+ LP
Sbjct: 203 SLVGYTNAGKSTLFNRLVDENIYAADKLFATLDPTLRRLDWQGVGRVVLVDTVGFVRHLP 262
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
+LV++FHATLEE +EADLL+HV+D ++ ++ E V VL ++ + ++ V+N
Sbjct: 263 HELVESFHATLEETLEADLLLHVIDSSSEDMHEQIQAVKDVLAEI----DNDVPVLNVYN 318
Query: 421 KIDYHDE 427
KID DE
Sbjct: 319 KIDVTDE 325
>gi|403720426|ref|ZP_10943983.1| putative GTP-binding protein HflX [Gordonia rhizosphera NBRC 16068]
gi|403207745|dbj|GAB88314.1| putative GTP-binding protein HflX [Gordonia rhizosphera NBRC 16068]
Length = 497
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/319 (38%), Positives = 176/319 (55%), Gaps = 34/319 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G + ++ + + D + + L+ Q LE+ V+DR LI++IF
Sbjct: 125 TYIGSGKADELREAVLATGA----DTVICDGELTPAQLTALEKIVKVKVIDRTALILDIF 180
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR-GSGGRGFI 246
HA ++E K Q LA + Y L R+RG GE+ A GR GS G +
Sbjct: 181 AQHATSREGKAQVSLAQMEYM---LPRLRG---------WGESMSRQAGGRAGSNGGVGL 228
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+++ RRRI ER + L +I E++++R V RAAR R G + + VVGYT
Sbjct: 229 RGPGETKIETDRRRIRERMAKLRREIREMKKSRTVMRAARERTG------IPRLTVVGYT 282
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
NAGKS+LV+A++ + + LFATLDP + L GR V+ +DTVGF+ LP QLV+A
Sbjct: 283 NAGKSSLVNAMTGAGVLVQNALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLVEA 342
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE--VWNKIDY 424
F +TLEEVV+ADLL+HV+D + P E + V QV+ +V V+EE + E V NKID
Sbjct: 343 FRSTLEEVVDADLLLHVVDGSDPFPAEQISAVRQVIGEV-VAEEGAQPPPELLVINKIDA 401
Query: 425 HDE--------EMGDVEYI 435
D GD Y+
Sbjct: 402 IDATRMTELRGAFGDAAYV 420
>gi|310658631|ref|YP_003936352.1| GTP-binding protein hflX [[Clostridium] sticklandii]
gi|308825409|emb|CBH21447.1| GTP-binding protein hflX [[Clostridium] sticklandii]
Length = 432
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 170/309 (55%), Gaps = 39/309 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G E IK + N ++ + I N LSG Q RNLE G ++DR LI++IF
Sbjct: 65 YLGKGKAEEIKEYANNMQA----NLIVFNEELSGAQIRNLEEIIGLDIIDRTALILDIFA 120
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A ++E KLQ ELA Y+ RL+ V RL G +
Sbjct: 121 KRALSREGKLQVELAQYKYRLPRLIGVGKEMSRLGGGIGTKG------------------ 162
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE +L+ +R I ER + +++E+++ R +QR+ R + L VA+VGYTN+
Sbjct: 163 PGEKKLETDKRHIRERIYDIQRELKEIKKNREIQRSKRLKSN------LPIVALVGYTNS 216
Query: 309 GKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
GKSTL++ L +D D+F LFATLD L+ +LPS ++ L++DTVGF+SDLP
Sbjct: 217 GKSTLLNKLIQSHREYSADKDVFVKDMLFATLDVSLRKAILPSNKEYLITDTVGFVSDLP 276
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV+AF ATLEEV ADLL+HV+D + + T L VL+++G ++ K MI V+N
Sbjct: 277 HYLVEAFKATLEEVSYADLLLHVVDSSNEHFNLQIDTTLGVLKEIGAAD---KPMIYVFN 333
Query: 421 KIDYHDEEM 429
K D + E+
Sbjct: 334 KADKVNYEL 342
>gi|425744488|ref|ZP_18862544.1| GTP-binding protein HflX [Acinetobacter baumannii WC-323]
gi|425490643|gb|EKU56939.1| GTP-binding protein HflX [Acinetobacter baumannii WC-323]
Length = 447
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 180/317 (56%), Gaps = 36/317 (11%)
Query: 107 ELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
E+ H+VVQ K F G G V+ I + E+ + + + LS Q+R
Sbjct: 41 EILEHLVVQR-----NKPDPKFFIGSGKVDEIAELVQSLEA----ELVIFDHSLSPAQER 91
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLER V+DR GLI++IF A T E KLQ ELA L + +RL+R G
Sbjct: 92 NLERILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GF 141
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
TG E + GG G + G GE++L+ RR I R + L ++ +V++TR RAAR
Sbjct: 142 TGNLE------QQKGGIG-LRGPGESQLETDRRLIRVRITQLKDKLVKVQQTRLQGRAAR 194
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRK 346
++ + T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ +
Sbjct: 195 QK------AAIPTISLVGYTNAGKSTLFNLLAKSDVYAADQLFATLDPTLRRLDWDGIGT 248
Query: 347 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 406
V+L+DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++PN+ E V VL+++G
Sbjct: 249 VVLADTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSPNMPEQIEAVESVLKEIG 308
Query: 407 VSEEKLKNMIEVWNKID 423
++ V+NKID
Sbjct: 309 AD----APILHVYNKID 321
>gi|294651533|ref|ZP_06728842.1| GTP-binding family protein [Acinetobacter haemolyticus ATCC 19194]
gi|292822556|gb|EFF81450.1| GTP-binding family protein [Acinetobacter haemolyticus ATCC 19194]
Length = 445
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 181/313 (57%), Gaps = 35/313 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ S++ K F G G VE I AE LDA + + LS Q+RNLE+
Sbjct: 42 ILEHVSVQRQKPDPKFFIGSGKVEEI------AELVRALDAELVIFDHSLSPAQERNLEK 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G TG
Sbjct: 96 VLKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GFTGNL 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GE++L+ RR I R + L ++ +V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGESQLETDRRLIRVRITQLKDKLIKVQQTRLQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
+ T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + V+L+
Sbjct: 197 ----AAIPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLA 252
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++PN+ E V VL+++G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVVDSSSPNMPEQIEAVESVLKEIGAD-- 310
Query: 411 KLKNMIEVWNKID 423
++ V+NKID
Sbjct: 311 --APILHVYNKID 321
>gi|325927205|ref|ZP_08188466.1| GTP-binding proten HflX [Xanthomonas perforans 91-118]
gi|325542433|gb|EGD13914.1| GTP-binding proten HflX [Xanthomonas perforans 91-118]
Length = 413
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 180/325 (55%), Gaps = 33/325 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GL
Sbjct: 25 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGL 80
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 81 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 126
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 127 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 177
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +
Sbjct: 178 VGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGG-SAILADTVGFVRDLPHE 236
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKI
Sbjct: 237 LVAAFRSTLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKI 293
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAE 447
D E +V + D I + +R E
Sbjct: 294 DKI--EGAEVRHDAQDGIPDPARRE 316
>gi|376317235|emb|CCG00604.1| GTP-binding proten HflX [uncultured Flavobacteriia bacterium]
Length = 403
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 176/309 (56%), Gaps = 34/309 (11%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K G + TF G G +E ++ +I K E+ + + LS QQRN+E+ +LDR
Sbjct: 52 KMGSPNSKTFLGSGKIEEVREYI----EKHEVGLVVFDDELSPAQQRNIEKILECKILDR 107
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI++IF A T A+ Q ELA Y RL G T E R
Sbjct: 108 TNLILDIFAQRAQTSYARTQVELAQYQYLLPRLT------GMWTHLE-----------RQ 150
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG G + G GETE++ RR + +R S L ++++V + VQR R GS L
Sbjct: 151 KGGIG-MRGPGETEIETDRRIVRDRISLLKKKLQKVDKQMLVQRGNR----GS----LIR 201
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
VA+VGYTN GKSTL++ +S SD+F++ +LFATLD ++ VV+ + L+SDTVGFI L
Sbjct: 202 VALVGYTNVGKSTLMNVISKSDVFAENKLFATLDTTVRKVVIKN-LPFLVSDTVGFIRKL 260
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P QLV++F +TL+EV EADLL+HV+D + + E+H +V ++L ++ S+ K + V+
Sbjct: 261 PTQLVESFKSTLDEVREADLLLHVVDISHASFEDHIASVEKILGEINASD---KPCVMVF 317
Query: 420 NKIDYHDEE 428
NKID + E
Sbjct: 318 NKIDAYKYE 326
>gi|86134603|ref|ZP_01053185.1| GTP-binding protein HflX [Polaribacter sp. MED152]
gi|85821466|gb|EAQ42613.1| GTP-binding protein HflX [Polaribacter sp. MED152]
Length = 403
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 192/353 (54%), Gaps = 39/353 (11%)
Query: 81 LNEALCLANSLEEQRDGYFDTDFFDK-----ELPPHVVVQNPSLKSGKARADTFFGPGTV 135
++E L + +Q+D T++ D+ + VVV+ K + TF G G +
Sbjct: 8 ISEKAVLIGVITQQQDETKSTEYLDELEFLTQTAGGVVVKRFVQKMERPNPKTFLGAGKL 67
Query: 136 ETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
E +K +I +S AIF + LS Q RN+E+ +LDR LI++IF A T
Sbjct: 68 EDVKAYI---QSNMIGTAIFDDE-LSPAQLRNIEKILDCKILDRTNLILDIFAQRAQTSS 123
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
AK Q ELA Y RL R+ + + GG G + G GETE++
Sbjct: 124 AKTQVELAQSEYLLPRLTRLW-----------------THLDKQKGGIG-MRGPGETEIE 165
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR I ++ + L +++ + + AVQR R + + VA+VGYTN GKSTL++
Sbjct: 166 TDRRIIRDKITLLKKRLKTIDKQMAVQRKNRGK--------MVRVALVGYTNVGKSTLMN 217
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVV 375
+S SD+F++ +LFATLD ++ VV+ + L++DTVGFI LP QLV++F +TL+EV
Sbjct: 218 VVSKSDVFAENKLFATLDTTVRKVVIKNI-PFLMTDTVGFIRKLPTQLVESFKSTLDEVR 276
Query: 376 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
EADLL+HV+D + PN E+H +V +L + ++ K + V+NKID + E
Sbjct: 277 EADLLLHVVDISHPNFEDHIASVNSILTDIKCAD---KPTLMVFNKIDAYQHE 326
>gi|365902422|ref|ZP_09440245.1| GTPase [Lactobacillus malefermentans KCTC 3548]
Length = 423
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 200/385 (51%), Gaps = 44/385 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G VE +K + E++ + N LS Q RNLE V+DR GLI++
Sbjct: 52 AGTYFGTGKVEELKDIV----IDDEVEMVIANDELSPSQIRNLEGVINVAVIDRTGLILQ 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A ++EAKLQ +LA L Y+ RL T ++ + + S G GF
Sbjct: 108 IFADRAQSREAKLQVQLAKLQYQLPRL-------------HTSASQRLDQQTGTSSGGGF 154
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ GAGE++++L RR I + +H+ +++E+ ++ +R R R G L +A+VG
Sbjct: 155 TNRGAGESQIELNRRVIERQINHVRQELKEISKSEETKRQQRERQG------LPMIALVG 208
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTNAGKST+++AL + +F LFATLD ++ + +K+LLSDTVGF++
Sbjct: 209 YTNAGKSTIMNALVRQFGTSEEKQVFEKNMLFATLDTSVRQLTFGDQKKLLLSDTVGFVA 268
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP L++AF +TL E ADLL+ V+D PN + T ++ L+ +GV MI
Sbjct: 269 HLPTHLIEAFKSTLYEAANADLLIQVVDAADPNRDSMMATTMKTLEDIGVPNLP---MIV 325
Query: 418 VWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDV---ECIDNYGGDDADNNDG 474
+NK D D E G++++ +R D + + +D+ + NY AD
Sbjct: 326 AYNKADLTDVSFPSRE---GENLTMSAR--DDASIALLIDMIREKVFKNYV--TADFLIP 378
Query: 475 FVSEDLGESMNKNHNDYSDGWLLSG 499
F + D+ N+N N S ++ G
Sbjct: 379 FANGDVVSYFNENANVLSTEYVADG 403
>gi|407459071|ref|YP_006737174.1| GTP-binding proten HflX [Chlamydia psittaci M56]
gi|405786165|gb|AFS24910.1| GTP-binding proten HflX [Chlamydia psittaci M56]
Length = 458
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 162/273 (59%), Gaps = 22/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ A+ V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGALIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMVRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLPSG++VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T ++L+++GV K +I V NKID
Sbjct: 321 AFEHIETTQEILKELGVDYPK---IITVLNKID 350
>gi|374704693|ref|ZP_09711563.1| GTP-binding protein HflX [Pseudomonas sp. S9]
Length = 433
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 174/306 (56%), Gaps = 31/306 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ S + A G G VE ++ + AE+ D + N +L+ Q+RNLERA+ VL
Sbjct: 47 SVPSNRLTAKYLIGSGKVEELRDQVKSAEA----DLVIFNHVLTPSQERNLERAFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLDHLSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++ +VR R R R+R +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQKLNKVRSQREQARRGRQRAD------I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
+V++VGYTNAGKSTL +A+++S++++ +LFATLDP L+ + L ++L+DTVGFI
Sbjct: 199 PSVSLVGYTNAGKSTLFNAVTESEVYAADQLFATLDPTLRRLDLNDFGPIVLADTVGFIR 258
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV+AF ATLEE +DLL+HV+D P V+ VL ++G E ++E
Sbjct: 259 HLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMAQIEQVMAVLTEIGAHE---LPILE 315
Query: 418 VWNKID 423
V+NK+D
Sbjct: 316 VYNKLD 321
>gi|443326320|ref|ZP_21054978.1| GTP-binding protein HflX [Xenococcus sp. PCC 7305]
gi|442794060|gb|ELS03489.1| GTP-binding protein HflX [Xenococcus sp. PCC 7305]
Length = 573
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 182/327 (55%), Gaps = 46/327 (14%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q S K + T G G V+ I I + + + + LS Q RNLE
Sbjct: 247 VVLQTISQKRARPHPQTVVGAGKVQEIALRIQTTGA----NLVVFDRDLSPAQGRNLESQ 302
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
+G V+DR +I++IF A ++ KLQ ELA L Y RLV
Sbjct: 303 FGIRVVDRTEVILDIFAQRAQSRAGKLQVELAQLEYMLPRLV------------------ 344
Query: 232 VVSARGRGSGGRGFISGAG-----ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
GRG G G ET+L+ +RR I ++ +HL + E++ R+ R R
Sbjct: 345 -----GRGQAMSRLGGGIGTRGPGETKLETERRSIQKKITHLQRDVNELQAHRSRLRKQR 399
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP---S 343
++ +ATVA+VGYTNAGKSTL++AL++SD+++ RLFATLDP + + +P +
Sbjct: 400 QKQD------IATVAIVGYTNAGKSTLINALTNSDVYAADRLFATLDPTTRRLAIPDPVT 453
Query: 344 GR--KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQV 401
G+ +LL+DTVGFI +LP LVDAF ATLEEV EAD L+HV+D + P+ + +V+++
Sbjct: 454 GKPCNILLTDTVGFIQELPPSLVDAFRATLEEVTEADTLLHVVDLSHPSWQNQIRSVMKI 513
Query: 402 LQQVGVSEEKLKNMIEVWNKIDYHDEE 428
LQ++ ++ + M+ V+NK+D D E
Sbjct: 514 LQEMPLA---VGPMLLVFNKLDQVDSE 537
>gi|226953962|ref|ZP_03824426.1| GTP-binding protein [Acinetobacter sp. ATCC 27244]
gi|226835316|gb|EEH67699.1| GTP-binding protein [Acinetobacter sp. ATCC 27244]
Length = 445
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 181/313 (57%), Gaps = 35/313 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ S++ K F G G VE I AE LDA + + LS Q+RNLE+
Sbjct: 42 ILEHVSVQRQKPDPKFFIGSGKVEEI------AELVRALDAELVIFDHSLSPAQERNLEK 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G TG
Sbjct: 96 VLKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GFTGNL 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GE++L+ RR I R + L ++ +V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGESQLETDRRLIRVRITQLKDKLIKVQQTRLQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
+ T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + V+L+
Sbjct: 197 ----AAIPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLA 252
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++PN+ E V VL+++G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVVDSSSPNMPEQIEAVESVLKEIGAD-- 310
Query: 411 KLKNMIEVWNKID 423
++ V+NKID
Sbjct: 311 --APILHVYNKID 321
>gi|408356784|ref|YP_006845315.1| GTP-binding protein HflX [Amphibacillus xylanus NBRC 15112]
gi|407727555|dbj|BAM47553.1| putative GTP-binding protein HflX [Amphibacillus xylanus NBRC
15112]
Length = 406
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 169/311 (54%), Gaps = 31/311 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + T+ G G +E I I E +D I N LS Q RNL+
Sbjct: 38 VVDVITQKRNQPHPATYLGKGKIEEIDLIIESEE----IDLIIANDELSASQMRNLQNRT 93
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR LI++IF + A + E KLQ ELA Y RL G+
Sbjct: 94 GVSVIDRSQLILDIFASRATSNEGKLQVELAQYQYLLPRL--------------HGQGLA 139
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+S G G RG GET+L+ RR I R + + +++ V R R RR +
Sbjct: 140 LSRLAGGIGTRG----PGETKLESDRRHINRRINEIKRRLQTVVNQREQYRKRRRLNHTF 195
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+ +A+VGYTNAGKSTL + L+DSD F + +LFATLDP + + LPSG +++DT
Sbjct: 196 N------IAIVGYTNAGKSTLFNRLTDSDSFEEDQLFATLDPMSRKLKLPSGLSAIITDT 249
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+ DLP +L+ AF +TLEEV EADL+ HV+D + P+ ++ + TVL++L+++
Sbjct: 250 VGFMQDLPTELIAAFKSTLEEVSEADLIFHVVDASHPDHDQQQATVLELLEELNADH--- 306
Query: 413 KNMIEVWNKID 423
M+ ++NK D
Sbjct: 307 IPMLTIYNKRD 317
>gi|255280317|ref|ZP_05344872.1| GTP-binding protein HflX [Bryantella formatexigens DSM 14469]
gi|255269408|gb|EET62613.1| GTP-binding protein HflX [Marvinbryantia formatexigens DSM 14469]
Length = 415
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 166/296 (56%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E +K E+ DA+ + LS Q NL++ VLDR +I++IF
Sbjct: 59 TYIGRGKIEEVKQMAYALEA----DAVICDDELSPAQLHNLQQELDMKVLDRTLIILDIF 114
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A A T E K+Q ELA L Y+++RLV +R RL G
Sbjct: 115 AARASTSEGKIQVELAQLKYRQARLVGLRNSLSRLGGGIGTRG----------------- 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GE +L++ RR I +R + L ++ EV+R R V R+ R R A+VGYTN
Sbjct: 158 -PGEKKLEMDRRLIKDRIAQLNRELSEVKRHREVTRSRRMRQQTP------VAAIVGYTN 210
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL++ L+ S + + +LFATLDP + + LPSG+++LL+DTVGFI LP L+DAF
Sbjct: 211 AGKSTLLNTLTGSQVMEEDKLFATLDPTTRVLELPSGQEMLLTDTVGFIRKLPHHLIDAF 270
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TLEE AD+++HV+D + P E+ V + L+ +GVS K +I ++NK D
Sbjct: 271 RSTLEEAKYADIILHVVDASNPQAEQQMAVVYETLENLGVSG---KTVITLFNKQD 323
>gi|224538829|ref|ZP_03679368.1| hypothetical protein BACCELL_03725 [Bacteroides cellulosilyticus
DSM 14838]
gi|423227369|ref|ZP_17213832.1| GTP-binding protein HflX [Bacteroides cellulosilyticus CL02T12C19]
gi|224519556|gb|EEF88661.1| hypothetical protein BACCELL_03725 [Bacteroides cellulosilyticus
DSM 14838]
gi|392624082|gb|EIY18177.1| GTP-binding protein HflX [Bacteroides cellulosilyticus CL02T12C19]
Length = 419
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 183/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELEFLAETAGAEVVKRFTQKLDQAHSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + A+VGYTN GKSTL++ L+ S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------MIRAALVGYTNVGKSTLMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G S K +I V+NKID +
Sbjct: 308 FEEQIEVVNKTLADIGASG---KPIILVFNKIDAY 339
>gi|94971366|ref|YP_593414.1| HSR1-like GTP-binding protein [Candidatus Koribacter versatilis
Ellin345]
gi|94553416|gb|ABF43340.1| GTP-binding protein, HSR1-related protein [Candidatus Koribacter
versatilis Ellin345]
Length = 451
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 168/306 (54%), Gaps = 51/306 (16%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E + GA + + D + + LS QQRN+ERA V+DR LI++IF
Sbjct: 91 TLIGSGKLE----ELQGAVAASDADLVIFDHDLSPSQQRNIERALEARVIDRTQLILDIF 146
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF-- 245
HA T E +LQ ELA L Y RL GGRG
Sbjct: 147 AKHARTAEGQLQVELAQLQYLLPRL----------------------------GGRGIEM 178
Query: 246 --------ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
G GET+L+ RR+I R H+ Q+E+VRR R QRA + +
Sbjct: 179 SQLGGGIGTRGPGETQLETDRRKINRRIRHVQKQLEDVRRIRRQQRAR------RENVPV 232
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
A VA+VGYTNAGKSTL +AL+ + +++ +++FATLDP L+ V+LPS R+VLLSDTVGFI
Sbjct: 233 AVVALVGYTNAGKSTLFNALTKAGVYASSKMFATLDPTLRGVMLPSKRQVLLSDTVGFIR 292
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
+LP LV AF ATLEEV A LL+HV D T+P E + V VL ++ V + K I
Sbjct: 293 NLPTTLVSAFRATLEEVQRAALLLHVADATSPVALEQQRQVEDVLGELEVQD---KPQIH 349
Query: 418 VWNKID 423
V NKID
Sbjct: 350 VMNKID 355
>gi|260593313|ref|ZP_05858771.1| GTP-binding protein HflX [Prevotella veroralis F0319]
gi|260534725|gb|EEX17342.1| GTP-binding protein HflX [Prevotella veroralis F0319]
Length = 416
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 181/330 (54%), Gaps = 23/330 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + A T+ G G +E IK +I E E + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVNGPSAVTYVGKGKLEEIKEYIKQKEDDDEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E+ G +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIEQELGVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQRLAEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R L VA+VGYTN GKST ++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKTTQRKNRGR--------LIRVALVGYTNVGKSTTMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVV-ENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIQ 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKID-YH 425
V Q L ++G +++ +MI ++NKID YH
Sbjct: 314 VVNQTLSELGCADK--PSMI-IFNKIDNYH 340
>gi|383810953|ref|ZP_09966433.1| GTP-binding protein HflX [Prevotella sp. oral taxon 306 str. F0472]
gi|383356358|gb|EID33862.1| GTP-binding protein HflX [Prevotella sp. oral taxon 306 str. F0472]
Length = 416
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 181/330 (54%), Gaps = 23/330 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + A T+ G G +E IK +I E E + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVNGPSAVTYVGKGKLEEIKEYIKQKEDDDEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E+ G +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIEQELGVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQRLAEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R L VA+VGYTN GKST ++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKTTQRKNRGR--------LIRVALVGYTNVGKSTTMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVV-ENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIQ 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKID-YH 425
V Q L ++G +++ +MI ++NKID YH
Sbjct: 314 VVNQTLTELGCADK--PSMI-IFNKIDNYH 340
>gi|407716810|ref|YP_006838090.1| GTP-binding subunit of protease specific for phage lambda cII
repressor [Cycloclasticus sp. P1]
gi|407257146|gb|AFT67587.1| GTP-binding subunit of protease specific for phage lambda cII
repressor [Cycloclasticus sp. P1]
Length = 419
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 173/298 (58%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G ++ +K ++ + D + N LS QQRNLE+ VLDR LI++
Sbjct: 56 ARFFVGKGKLDEVKHQLHETCA----DIVLFNHTLSPSQQRNLEKELEVRVLDRTNLILD 111
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L + +RL+R G T R GG G
Sbjct: 112 IFAQRAQSFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 153
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I +R + +++ +V + R R +R+R + TV++VGY
Sbjct: 154 LRGPGETQLETDRRLIGQRIRQIKTRLTKVNKQRDQGRRSRQR------ADVPTVSLVGY 207
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L++S +++ +LFATLDP L+ V LP +++L+DTVGFI +LP +LV
Sbjct: 208 TNAGKSTLFNVLTNSAIYAADQLFATLDPTLRQVKLPDYGELVLADTVGFIQNLPHELVA 267
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF +TL+E +EADLL+HV+D ++PN +E V VL+++G + V+NKID
Sbjct: 268 AFRSTLQETIEADLLLHVVDASSPNRQEQIHEVNSVLKEIGADNIP---QVMVYNKID 322
>gi|334129948|ref|ZP_08503751.1| GTP-binding protein HflX [Methyloversatilis universalis FAM5]
gi|333444984|gb|EGK72927.1| GTP-binding protein HflX [Methyloversatilis universalis FAM5]
Length = 421
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 163/296 (55%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G V I N GE D + N LS QQRNLERA + V+DR LI++IF
Sbjct: 56 TFAGKGKVAEILDLANA----GEADIVLFNHELSPAQQRNLERALQRRVIDRNALILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR T E R GG G +
Sbjct: 112 ALRARSHEGKLQVELAQLEHLSTRLVR------GWTHLE-----------RQKGGIG-LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + R L ++ +V R R V+R +R R R VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLGVRVKALKERLAKVERQRGVRRKSRER------RATPVVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +AL+ + ++ +LFATLD + + L +V+LSDTVGFI DLP LV AF
Sbjct: 208 AGKSTLFNALTKAGTYAADQLFATLDTTSRQLYLGEFGQVVLSDTVGFIRDLPHTLVAAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
HATLEE ADLL+HV+D +AP+ + V +VL +VG I V NKID
Sbjct: 268 HATLEETAGADLLLHVIDASAPDRDAQIEAVDRVLAEVGADAVP---QIRVLNKID 320
>gi|323344483|ref|ZP_08084708.1| GTP-binding protein HflX [Prevotella oralis ATCC 33269]
gi|323094610|gb|EFZ37186.1| GTP-binding protein HflX [Prevotella oralis ATCC 33269]
Length = 414
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/329 (37%), Positives = 185/329 (56%), Gaps = 22/329 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGELDAIFV 156
Y D F + V V+ + K G + T+ G G +E IK +I + E++ + +
Sbjct: 32 YLDELEFLADTAGAVTVRRFTQKVGGPNSVTYVGTGKLEEIKQYIKDEEEAERPVGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q R +E+ G +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQIRVIEKELGVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++EE+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKRRLEEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKTTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE T
Sbjct: 255 RKVVV-DNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIT 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
V L+++G +E+ +MI V+NKID +
Sbjct: 314 VVENTLKELGCAEK--PSMI-VFNKIDNY 339
>gi|373857385|ref|ZP_09600127.1| GTP-binding proten HflX [Bacillus sp. 1NLA3E]
gi|372453035|gb|EHP26504.1| GTP-binding proten HflX [Bacillus sp. 1NLA3E]
Length = 419
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 181/345 (52%), Gaps = 32/345 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V+ + S K + T+ G G +E +K E + E D I N LS Q RNL R
Sbjct: 43 VMISVSQKRDRVHPATYIGKGKIEELK----ALEDELEPDLIIFNDELSSTQIRNLSREL 98
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI++IF A +KE KLQ E A L Y RLV G+
Sbjct: 99 DARVIDRTQLILDIFATRARSKEGKLQVEYAQLQYMLPRLV--------------GQGTS 144
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+S G G G RG GET+L+ RR I R + SQ+ + R R R+++
Sbjct: 145 MSRLGAGIGTRG----PGETKLESDRRHIRRRIDDIKSQLTVIVGHRDRYRERRKKNKAF 200
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+A+VGYTNAGKSTL + L+++D + +LFATLDP + ++LPSG L +DT
Sbjct: 201 Q------IAIVGYTNAGKSTLFNRLTEADTLEENQLFATLDPTTRKMILPSGFTTLTTDT 254
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+ DLP L+ AF +TLEEV EADLL+HV+DC+ P+ +H TV +L+++ E +
Sbjct: 255 VGFLQDLPTTLIAAFRSTLEEVNEADLLLHVVDCSNPDYFQHEKTVQHLLEEL---ENQH 311
Query: 413 KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
+ V+NK D + V + IS F ED+ + V+
Sbjct: 312 LPQLTVYNKKDMMQPDFVPVAKTETITISAFEE-EDRQKLKQKVE 355
>gi|152986375|ref|YP_001350991.1| GTP-binding proten HflX [Pseudomonas aeruginosa PA7]
gi|150961533|gb|ABR83558.1| GTP-binding proten HflX [Pseudomonas aeruginosa PA7]
Length = 433
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/354 (38%), Positives = 193/354 (54%), Gaps = 38/354 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ + A G G VE + + AE+ ++ + N L+ Q+RNLERA+ VL
Sbjct: 47 SVSRHQPSAKYLIGSGKVEELHDLVK-AEN---VELVIFNHTLTPSQERNLERAFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +D +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKR---AD---I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
V++VGYTNAGKSTL +AL+ S++++ +LFATLDP L+ + L V+L+DTVGFI
Sbjct: 199 PAVSLVGYTNAGKSTLFNALTSSEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFIR 258
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV+AF ATLEE ADLL+HV+D P + VL VL ++G +E M+E
Sbjct: 259 HLPHKLVEAFRATLEESSNADLLLHVIDAHEPERDAQIEQVLAVLGEIGANE---LPMLE 315
Query: 418 VWNKIDYHDEEMGDVE-YIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDD 468
V+NK+D + VE +I DD R T E +D+ + I G+D
Sbjct: 316 VYNKVDL----LPSVEPHIQRDDAGKPVRVWLSAQTGEGLDLLRQAIAELLGED 365
>gi|220931954|ref|YP_002508862.1| small GTP-binding protein [Halothermothrix orenii H 168]
gi|219993264|gb|ACL69867.1| small GTP-binding protein [Halothermothrix orenii H 168]
Length = 395
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 174/297 (58%), Gaps = 38/297 (12%)
Query: 129 FFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
+ G G ++ +K + NGA IF N L+ Q RNLE V+DR LI++I
Sbjct: 39 YIGKGKLKELKHLVFENGANL-----VIFDNE-LTPAQFRNLENFLETRVVDRTQLILDI 92
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F HAHT+E+KLQ ELA L Y RL TG+ E +S G G G
Sbjct: 93 FAQHAHTRESKLQVELAQLQYLLPRL--------------TGKGEELSRLGGGIGT---- 134
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+L++ RRRI +R L +++ V++ R +QR +R+ VA+VGYT
Sbjct: 135 RGPGETKLEIDRRRIEKRIYKLKQELKNVKKNRQIQRKSRKD---------PVVALVGYT 185
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
NAGKSTL++ L++++ +LFATLD L+ + LP G+++++SDTVGFI LP QLV +
Sbjct: 186 NAGKSTLLNTLTNANTEVADKLFATLDSTLRRLTLPFGKQIIISDTVGFIKKLPHQLVAS 245
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
F ATLEE+ EAD+L+HV+D + P LE H V VL+++GV K I V NKID
Sbjct: 246 FQATLEEIKEADILLHVVDSSEPELENHIKVVNAVLKELGVFH---KEKIMVLNKID 299
>gi|340622730|ref|YP_004741182.1| GTP-binding protein hflX [Capnocytophaga canimorsus Cc5]
gi|339902996|gb|AEK24075.1| GTP-binding protein hflX [Capnocytophaga canimorsus Cc5]
Length = 408
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 198/382 (51%), Gaps = 37/382 (9%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EE+ Y D F V+Q + K TF G G +E ++ + E G
Sbjct: 24 EEKSKEYLDELEFLTYTAGGEVLQRFTQKLDVPNPKTFIGTGKMEEVQQFV---EENGVG 80
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
IF + LS QQ+N+ER +LDR GLI++IF A T ++ Q ELA Y R
Sbjct: 81 TVIFDDE-LSPAQQKNIERILKAKILDRTGLILDIFAQRAQTSYSRTQVELAQYQYLLPR 139
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L G T E R GG G + G GETE++ RR + +R + L +
Sbjct: 140 LT------GLWTHLE-----------RQRGGIG-MRGPGETEIETDRRIVRDRIALLKKK 181
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
+ + R AVQR R + VA++GYTN GKSTL++ +S S++F++ +LFAT
Sbjct: 182 LATIDRQMAVQRGNRG--------AMVRVALIGYTNVGKSTLMNVISKSEVFAENKLFAT 233
Query: 332 LDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 391
LD ++ VV+ LLSDTVGFI LP QL+++F +TL+EV EADLL+H++D + PN
Sbjct: 234 LDTTVRKVVI-GNLPFLLSDTVGFIRKLPTQLIESFKSTLDEVREADLLLHIVDISHPNF 292
Query: 392 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHDEEMGDVEYIDGDDISNFSRAEDKD 450
EEH +V Q+L ++ ++ K I V+NKID Y + + + + I +F+ + K
Sbjct: 293 EEHIHSVNQILSEIKSAD---KPTIMVFNKIDAYKHQTIAEDDLITEPTSKHFTLEQWKQ 349
Query: 451 TTSEPV--DVECIDNYGGDDAD 470
T V DV I D+ +
Sbjct: 350 TWMNKVGNDVLFISALNKDNLE 371
>gi|116618936|ref|YP_819307.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
gi|339481097|ref|ZP_08656756.1| GTPase [Leuconostoc pseudomesenteroides KCTC 3652]
gi|116097783|gb|ABJ62934.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
Length = 433
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 192/358 (53%), Gaps = 51/358 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A ++D I VN L+ Q RNLE+ V+DR GLI+EIF
Sbjct: 53 TYFGKGKVE----ELGEAVKTYDVDMIVVNDELTPSQIRNLEKTTDATVVDRTGLILEIF 108
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TK AKLQ +LA L Y+ RL + + + G+GG GF S
Sbjct: 109 AQRAQTKVAKLQVQLARLQYQLPRLRK--------------SMSISLDQQTGTGGAGFTS 154
Query: 248 -GAGETELQLQRRRILERRSHL---LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G+GET+L+ R+RI + H+ L+ +++ TR++QR A L VA+V
Sbjct: 155 RGSGETKLEQSRQRITSQMVHVRQELADLDKSENTRSMQRHAN---------NLPNVALV 205
Query: 304 GYTNAGKSTLVSAL-------SDSD----LFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
GYTNAGKSTL++ L +D+D +F LFATL+ ++ + LP R+ LLSDT
Sbjct: 206 GYTNAGKSTLMNRLLMRFGVGADNDDSKQVFEKDMLFATLNTTVRQLTLPDKRQFLLSDT 265
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+S LP LV AF +TL+E ADL++HV+D + + + T + L ++GV+
Sbjct: 266 VGFVSKLPHNLVAAFKSTLQEAANADLILHVVDVSDEHYKAMMETTEKTLTEIGVTG--- 322
Query: 413 KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDAD 470
K +I V+NK D + D I GD++ S DT S+ ++ I + +D++
Sbjct: 323 KPVITVYNKADRTELHYPD---ISGDNVITLSAL---DTNSQDALIDLIVKHIFNDSE 374
>gi|404449460|ref|ZP_11014450.1| GTP-binding protein HflX [Indibacter alkaliphilus LW1]
gi|403765148|gb|EJZ26033.1| GTP-binding protein HflX [Indibacter alkaliphilus LW1]
Length = 421
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 200/395 (50%), Gaps = 43/395 (10%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
AL ++Q Y D F E V + + K TF G G +E IK +I
Sbjct: 25 ALIKQGQSDQQAAEYLDELAFLTETLGASTVYRFTQRLEKPDVKTFVGTGKLEEIKSYIE 84
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
E +D + + LS Q RNLE V DR LI++IF A T +AK Q ELA
Sbjct: 85 HFE----VDMVIFDDDLSPSQMRNLENELKIKVYDRSLLILDIFLNRAQTAQAKTQVELA 140
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL R+ R RG G+ RG GAGE E++ +R I +
Sbjct: 141 RFQYLLPRLTRMWTHLER-------------QRG-GTSTRG---GAGEKEIETDKRDIRQ 183
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
+ + L ++++++ + QR R+ G+ VA+VGYTN GKSTL++ ++ S++
Sbjct: 184 KITLLKNKLKDIEKQGVTQRKGRK--------GIVRVALVGYTNVGKSTLMNLITKSEIL 235
Query: 324 SDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 383
++ +LFAT+D ++ VVL LLSDTVGFI LP L+++F +TL+E+ EADLLVHV
Sbjct: 236 AENKLFATVDSTVRKVVL-DNIPFLLSDTVGFIRKLPTHLIESFKSTLDEIREADLLVHV 294
Query: 384 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE--------MGDVEYI 435
+D + P E+H T V L ++G + K M+ V+NKID E+ M ++E
Sbjct: 295 IDISHPGFEDHFTVVNNTLNEIGARD---KPMLLVFNKIDLIQEKPSEEELQHMTEIEVE 351
Query: 436 DGD--DISNFSRAEDKDTTSEPVDVECIDNYGGDD 468
+ + D+ S A +K T PV + D +D
Sbjct: 352 ENNYLDLEKLSEAYEKKTGITPVFMAAQDGTHVED 386
>gi|383758603|ref|YP_005437588.1| GTP-binding protein HflX [Rubrivivax gelatinosus IL144]
gi|381379272|dbj|BAL96089.1| GTP-binding protein HflX [Rubrivivax gelatinosus IL144]
Length = 389
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 171/303 (56%), Gaps = 31/303 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + I+ + ++ G + + LS QQRNLER G PV DR LI++
Sbjct: 62 AALFVGSGKADEIRAMVGATQAHG----VIFDQTLSPAQQRNLERHLGVPVADRTSLILD 117
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A A + E KLQ ELA L Y +RLVR R + E + +
Sbjct: 118 IFAARAQSHEGKLQVELARLQYVATRLVR------RWSHLERQRGGIGTR---------- 161
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GE +++L RR I ER + +++E+V++ R QR AR R RG V++VGY
Sbjct: 162 -GGPGEAQIELDRRMIGERIKSVKARLEKVKQQRGTQRRARER------RGTFRVSLVGY 214
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL + ++ +LFATLD +S+ L +G V LSDTVGFI DLP +LV
Sbjct: 215 TNAGKSTLFNALVKARTYAADQLFATLDTTTRSLWLGEAGASVSLSDTVGFIRDLPHKLV 274
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
+AF ATL E +ADLL+HV+D +P L E + V +VL+++G + I V+NK D
Sbjct: 275 EAFEATLREAADADLLLHVVDAASPALLEQQAEVERVLEEIGAAG---VPQILVFNKCDL 331
Query: 425 HDE 427
+E
Sbjct: 332 LEE 334
>gi|332527859|ref|ZP_08403896.1| GTP-binding proten HflX [Rubrivivax benzoatilyticus JA2]
gi|332112436|gb|EGJ12229.1| GTP-binding proten HflX [Rubrivivax benzoatilyticus JA2]
Length = 371
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 169/299 (56%), Gaps = 31/299 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + I+ + ++ G + + LS QQRNLER G PV DR LI++
Sbjct: 44 AALFVGSGKADEIRAMVAATQAHG----VIFDQALSPAQQRNLERHLGVPVADRTSLILD 99
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A A + E KLQ ELA L Y +RLVR R + E + +
Sbjct: 100 IFAARAQSHEGKLQVELARLQYVATRLVR------RWSHLERQRGGIGTR---------- 143
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GE +++L RR I ER + +++E+V++ R QR AR R RG V++VGY
Sbjct: 144 -GGPGEAQIELDRRMIGERIKSVKARLEKVKQQRGTQRRARER------RGTFRVSLVGY 196
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL + ++ +LFATLD +S+ L +G V LSDTVGFI DLP +LV
Sbjct: 197 TNAGKSTLFNALVKAKTYAADQLFATLDTTTRSLWLGEAGMSVSLSDTVGFIRDLPHKLV 256
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+AF ATL E +ADLL+HV+D +P L E + V +VL+++G S I V+NK D
Sbjct: 257 EAFEATLREAADADLLLHVVDAASPALLEQQAEVERVLEEIGASG---VPQILVFNKCD 312
>gi|255319634|ref|ZP_05360844.1| GTP-binding protein HflX [Acinetobacter radioresistens SK82]
gi|255303318|gb|EET82525.1| GTP-binding protein HflX [Acinetobacter radioresistens SK82]
Length = 446
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 171/299 (57%), Gaps = 32/299 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I + E +D + N LS Q+RNLER V+DR GLI++IF
Sbjct: 58 FIGSGKAEEIAELVKTEE----IDLVIFNHSLSPAQERNLERVMQCRVIDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLEHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L+ RR + R L ++E+VR+TR RAAR++ + TV++VGYTNA
Sbjct: 156 PGESQLETDRRLLRIRMGQLKDKLEKVRQTRMQGRAARQK------AAIPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+++++++ +LFATLDP L+ + ++L+DTVGF+ +LP LV++F
Sbjct: 210 GKSTLFNILANTEVYAANQLFATLDPTLRRLEWDGIGSLVLADTVGFVRNLPHSLVESFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEE +EA LL+HV+D + P++ E V VL+++G L+ V+NKID E
Sbjct: 270 ATLEETLEATLLLHVIDSSTPDMMEQIDAVESVLKEIGADVPVLR----VYNKIDVSGE 324
>gi|393778656|ref|ZP_10366920.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|392611632|gb|EIW94364.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 412 str.
F0487]
Length = 401
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 181/325 (55%), Gaps = 35/325 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLTAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVI-ENLPFLLSDTVGFIRKLPTQLIESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHD 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTN 325
Query: 427 EEMGDVEYIDGDDISNFSRAEDKDT 451
EE+ + + +F+ E K T
Sbjct: 326 EEIAEDDLATQRTTKHFTLEEWKQT 350
>gi|365121233|ref|ZP_09338224.1| GTP-binding protein HflX [Tannerella sp. 6_1_58FAA_CT1]
gi|363645856|gb|EHL85109.1| GTP-binding protein HflX [Tannerella sp. 6_1_58FAA_CT1]
Length = 407
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 205/388 (52%), Gaps = 52/388 (13%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q +N+E+ +LDR LI++IF
Sbjct: 62 TFVGAGKLQEIKDYV----EENEIGLVIFDDDLSPKQLKNIEKELQVKILDRTSLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 AKRAQTANAKSQVELAQYQYLLPRLTRLW-----------------THLERQRGGIG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR IL++ S L ++++++ + + +QR R + + VA+VGYTN
Sbjct: 160 GPGETQIETDRRIILDKISRLKAELKQIDKQKEMQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ LS S++F++ +LFATLD ++ V++ LL+DTVGFI LP LV++F
Sbjct: 212 VGKSTLMNLLSKSEVFAENKLFATLDTTVRKVII-DNLPFLLTDTVGFIRKLPTHLVESF 270
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL+EV +ADLLVHV+D + P+ EE V Q L +V S + K MI V+NKID
Sbjct: 271 KSTLDEVRDADLLVHVVDISHPSFEEQIEIVNQTLHEVCNSSD--KPMIIVFNKIDAFS- 327
Query: 428 EMGDVEYI--DGDDIS-----NFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDL 480
Y+ D DD+S N S E K+T ++ CI + NN + + L
Sbjct: 328 ------YVEKDPDDLSPKTKENISLDELKETWMARMNENCI--FISAKEKNNIEELKKLL 379
Query: 481 GESMNKNHND---YSDGWLLSGDEQDNV 505
E + + H Y+D DE++N+
Sbjct: 380 YERVKEIHVTRFPYNDFLFQKYDEEENI 407
>gi|88801541|ref|ZP_01117069.1| GTP-binding protein HflX [Polaribacter irgensii 23-P]
gi|88782199|gb|EAR13376.1| GTP-binding protein HflX [Polaribacter irgensii 23-P]
Length = 402
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 180/332 (54%), Gaps = 34/332 (10%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
E Q D Y D F V V+ K K TF G G ++ ++ +I ES G
Sbjct: 24 ETQSDEYLDELEFLTSTAGGVAVKRFVQKMEKPNPKTFLGVGKLDEVRGYI---ESNGIG 80
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
AIF + LS Q RN+E+ +LDR LI++IF A + A+ Q ELA Y R
Sbjct: 81 TAIFDDE-LSPAQIRNIEKVLDCKILDRTNLILDIFAQRAQSSSARTQVELAQCQYLLPR 139
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L R+ + + GG G + G GETE++ RR I ++ L +
Sbjct: 140 LTRLW-----------------THLDKQKGGIG-MRGPGETEIETDRRIIRDKIDVLKKK 181
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
+ + + AVQR R + + +A+VGYTN GKSTL++ +S SD+F++ +LFAT
Sbjct: 182 LLTIDKQMAVQRKNRGK--------MVRIALVGYTNVGKSTLMNVISKSDVFAENKLFAT 233
Query: 332 LDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 391
LD ++ VV+ + L++DTVGFI LP QLV++F +TL+EV EADLL+HV+D + PN
Sbjct: 234 LDTTVRKVVIKNI-PFLMTDTVGFIRKLPTQLVESFKSTLDEVREADLLLHVIDISHPNF 292
Query: 392 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
E+H +V VLQ + ++ K + V+NKID
Sbjct: 293 EDHIASVNSVLQDIKCAD---KPTLMVFNKID 321
>gi|406592092|ref|YP_006739272.1| GTP-binding proten HflX [Chlamydia psittaci CP3]
gi|405787964|gb|AFS26707.1| GTP-binding proten HflX [Chlamydia psittaci CP3]
Length = 462
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 161/273 (58%), Gaps = 22/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLPSG++VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T ++L+++GV K+ I V NKID
Sbjct: 321 AFEHIETTKEILKELGVDHPKI---ITVLNKID 350
>gi|119502793|ref|ZP_01624878.1| probable GTP-binding protein [marine gamma proteobacterium
HTCC2080]
gi|119461139|gb|EAW42229.1| probable GTP-binding protein [marine gamma proteobacterium
HTCC2080]
Length = 405
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 128/314 (40%), Positives = 180/314 (57%), Gaps = 34/314 (10%)
Query: 118 SLKSGKARADT---FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGK 174
+L +G R+ T F G G +E I+ I AE+ D + N LS Q+RNLE A
Sbjct: 31 ALVTGHRRSPTAKFFVGTGKLEEIRI-IKEAENA---DLVVFNHPLSPSQERNLEAALEC 86
Query: 175 PVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVS 234
V+ R GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 87 RVIARTGLILDIFAQRARTHEGKLQVELAQLQHMSTRLVR----------GWTHLE---- 132
Query: 235 ARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDG 294
R GG G + G GET+L+ RR + R S + +++ +V+ RA R AR+R
Sbjct: 133 ---RQKGGIG-LRGPGETQLETDRRLLRVRISAIETRLGKVKAQRAQSRRARKRAE---- 184
Query: 295 RGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVG 354
L V++VGYTNAGKSTL + + +D+++ +LFATLDP L+ V +P V+L+DTVG
Sbjct: 185 --LPLVSIVGYTNAGKSTLFNRYASADVYAADQLFATLDPTLRRVEIPHLGDVVLADTVG 242
Query: 355 FISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN 414
FISDLP L+DAF ATLEE + ADLL+HV+D +A E + V VL ++G +
Sbjct: 243 FISDLPHTLIDAFKATLEETLNADLLIHVIDVSADQREYWMSEVDLVLSEIGAGDVP--- 299
Query: 415 MIEVWNKIDYHDEE 428
M+ V+NK+D +++
Sbjct: 300 MLCVFNKLDLLEQQ 313
>gi|189499925|ref|YP_001959395.1| GTP-binding proten HflX [Chlorobium phaeobacteroides BS1]
gi|189495366|gb|ACE03914.1| GTP-binding proten HflX [Chlorobium phaeobacteroides BS1]
Length = 433
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 171/296 (57%), Gaps = 34/296 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE I+ + G G +D + + LS +Q RNLERA+ V+DR LI++IF
Sbjct: 64 FLGKGKVEEIEHIVKG----GLIDVVIFDEELSPVQTRNLERAFDCKVVDRTELILQIFA 119
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + +AK+Q ELA L Y RL R+ + + GG G G
Sbjct: 120 IRAQSSQAKMQVELAQLEYLLPRLTRLW-----------------THLSKQKGGIG-TKG 161
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+++ RR + R S L ++++V A+Q A + + G R VA+VGYTNA
Sbjct: 162 PGETQIETDRRLVRRRISFLKGKLKDV----ALQHATQTKDRGRITR----VALVGYTNA 213
Query: 309 GKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ L +++ + + RLFATLD + + + L + VLLSDTVGFI LP +LV++F
Sbjct: 214 GKSTLMNRLCPEAEAYVEDRLFATLDTKTRRLELKINKVVLLSDTVGFIRKLPHRLVESF 273
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+EV++AD L+HV+D + EE VL+ LQ++GV N+I V+NKID
Sbjct: 274 RSTLDEVLQADFLLHVIDTSHEGFEEQMRVVLETLQEIGVQH---GNIINVFNKID 326
>gi|334136023|ref|ZP_08509502.1| GTP-binding protein HflX [Paenibacillus sp. HGF7]
gi|333606636|gb|EGL17971.1| GTP-binding protein HflX [Paenibacillus sp. HGF7]
Length = 430
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 176/318 (55%), Gaps = 50/318 (15%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K ++ + G G +E + + E+ G D + N L+ Q RNLE A + V+DR
Sbjct: 46 KLARSNPSHYIGKGKIEEL---LELIETHGA-DLVICNDELTPSQLRNLEAALNRTVMDR 101
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI+ IF A T+EA+LQ E+A L Y RLV +R GR +G G
Sbjct: 102 TALILAIFAERARTREAQLQVEVARLHYMLPRLVGLRESLGR--------------QGGG 147
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
SG + GAGET+L+L RRRI ER L ++E++ R QR RR+ +
Sbjct: 148 SGLKN--RGAGETKLELDRRRIEERIVMLQKELEQLVSHRQTQRKKRRK------TEVPV 199
Query: 300 VAVVGYTNAGKSTLVSALSDS-------DLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
V +VGYTNAGKS+L++A+ ++ + ++ RLFATL+ ++S+ L GR LL+DT
Sbjct: 200 VCLVGYTNAGKSSLMNAMMEAHNPGPGKQVMAEDRLFATLETSVRSIRLQDGRSFLLTDT 259
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+S LP LV AF +TLEEV EADLL+HV+D ++P E +Q+ V+EE L
Sbjct: 260 VGFVSQLPHHLVKAFRSTLEEVAEADLLLHVVDSSSPVYE----------RQMAVTEETL 309
Query: 413 KNM-------IEVWNKID 423
K + + V+NK D
Sbjct: 310 KELGADHIPKLLVYNKAD 327
>gi|285017959|ref|YP_003375670.1| GTP-binding protein hflx [Xanthomonas albilineans GPE PC73]
gi|283473177|emb|CBA15683.1| probable gtp-binding protein hflx [Xanthomonas albilineans GPE
PC73]
Length = 441
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 169/301 (56%), Gaps = 31/301 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K A++ G D I VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AADASGA-DLILVNHALSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R AR R L +AV
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQKRLEKVEVQHTQMRRARVRSE------LPRIAV 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL +AL+ ++ ++ +LFATLDP ++ + LP G +L+DTVGF+ DLP +
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYAADQLFATLDPTVRRIALPGG-NAMLADTVGFVRDLPHE 262
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E EAD L+HV+D P EE V +VL VG E L ++ V+NKI
Sbjct: 263 LVAAFRSTLSEAREADFLLHVVDAADPLREERIAQVDEVLHAVGAGE--LPQLL-VFNKI 319
Query: 423 D 423
D
Sbjct: 320 D 320
>gi|255534048|ref|YP_003094420.1| GTP-binding proten HflX [Pedobacter heparinus DSM 2366]
gi|255347032|gb|ACU06358.1| GTP-binding proten HflX [Pedobacter heparinus DSM 2366]
Length = 396
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 169/298 (56%), Gaps = 34/298 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E I+ ++ E +D + + LS Q RN+E+ +LDR LI++IF
Sbjct: 64 TFVGTGKLEEIQAYVKSEE----IDMVVFDDELSPSQLRNIEKELQVKILDRSNLILDIF 119
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T +AK Q ELA L Y RL R+ + R GG G +
Sbjct: 120 AGRAQTAQAKTQVELAQLQYLLPRLTRLW-----------------THLERQKGGIG-MR 161
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR ILE+ S L ++++++ R QR R + L VA+VGYTN
Sbjct: 162 GPGETQIESDRRMILEKISLLKTRLKQIDRQNETQRKNRGQ--------LIRVALVGYTN 213
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKST+++ LS S++F++ +LFATLD ++ VV+ LLSDTVGFI LP LV+ F
Sbjct: 214 VGKSTIMNMLSKSEVFAENKLFATLDTTVRKVVI-ENLPFLLSDTVGFIRKLPHHLVECF 272
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
+TL+EV EAD+L+HV+D + PN E+ V + L+ +G + K+ I V+NKID +
Sbjct: 273 KSTLDEVREADILIHVVDVSHPNFEDQINVVNETLKDLGARD---KDTIMVFNKIDAY 327
>gi|76789109|ref|YP_328195.1| GTP-binding protein [Chlamydia trachomatis A/HAR-13]
gi|76167639|gb|AAX50647.1| HflX [Chlamydia trachomatis A/HAR-13]
Length = 447
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 165/273 (60%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D +++ +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFA 259
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLP G++VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+ EH T +LQ++G+++ + +I V NK+D
Sbjct: 320 VLEHVETTKAILQELGITQPQ---VITVLNKMD 349
>gi|373106600|ref|ZP_09520902.1| GTP-binding protein HflX [Stomatobaculum longum]
gi|371652294|gb|EHO17712.1| GTP-binding protein HflX [Stomatobaculum longum]
Length = 424
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 168/296 (56%), Gaps = 30/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE ++ + E+ DA+ + LS Q +NL A G V+DR +I++IF
Sbjct: 60 TYFGKGKVEELRELLLSLEA----DAVAADDELSPAQMKNLSEALGVKVMDRTMIILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
HA T E KLQ ELA L Y ++ L+ + RL G
Sbjct: 116 AQHAVTAEGKLQVELAQLHYTQAHLLGMHSSLSRLGGGVGTRGPG--------------- 160
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
E +L+L RR I R S L ++ E++R R V RA R + G VA+VGYTN
Sbjct: 161 ---EQKLELDRRAIRARISFLREKLGELKRHREVSRAQREKSGSY------IVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL++ L+D+ + ++ +LFATLDP + + LP G +VL++DTVGFI LP QL++AF
Sbjct: 212 AGKSTLLNRLTDAGILAENKLFATLDPTTRKLSLPGGEEVLVTDTVGFIRKLPHQLIEAF 271
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
H+TLEE ADL++HV+D ++P + V + L+++ E+ ++I V+NK D
Sbjct: 272 HSTLEEARYADLILHVVDASSPEADTQMAVVYETLRELKALED--HSIIAVYNKTD 325
>gi|406979290|gb|EKE01103.1| hypothetical protein ACD_21C00213G0002 [uncultured bacterium]
Length = 423
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 167/300 (55%), Gaps = 35/300 (11%)
Query: 129 FFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
F G G ++ H++ AE + N LS Q+RNLER V+DR GLI++I
Sbjct: 57 FIGTGKALEVRDSVHLHRAE------LVIFNHALSPAQERNLERLLQCRVIDRTGLILDI 110
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A + E KLQ ELA L + +RLVR G + RG G G RG
Sbjct: 111 FAQRARSFEGKLQVELALLKHLSTRLVR-------------GWTHLERQRG-GIGLRG-- 154
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GET+L+ RR I R + ++ +VR+ R R AR+ + T+A+VGYT
Sbjct: 155 --PGETQLETDRRLIRNRMRVITERLAKVRKQRQQSRRARKLAA------VPTIALVGYT 206
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
NAGKSTL + L+ +D++ RLFATLDP L+ V LP ++L+DTVGFI LP LVDA
Sbjct: 207 NAGKSTLFNQLTGADVYIADRLFATLDPTLRRVSLPKDGTIILADTVGFIRHLPHDLVDA 266
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
F ATLEEV EADLL+HV+D + N + + V VL +G ++ I V+NKID ++
Sbjct: 267 FRATLEEVCEADLLLHVVDASDENKQANIAQVQAVLTSIGAADVP---QILVYNKIDLNE 323
>gi|407460442|ref|YP_006738217.1| GTP-binding proten HflX [Chlamydia psittaci WC]
gi|405787157|gb|AFS25901.1| GTP-binding proten HflX [Chlamydia psittaci WC]
Length = 462
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 161/273 (58%), Gaps = 22/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLPSG++VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T ++L+++GV K +I V NKID
Sbjct: 321 AFEHIETTKEILKELGVDHPK---IITVLNKID 350
>gi|372270423|ref|ZP_09506471.1| HSR1-like GTP-binding protein [Marinobacterium stanieri S30]
Length = 432
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 172/308 (55%), Gaps = 40/308 (12%)
Query: 116 NPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKP 175
+P GK + D V+ ++ H E + + N LS Q+RNLER
Sbjct: 54 SPKFFLGKGKVDEL-----VDLVRMH--------EAELVIFNHALSPGQERNLERELKCR 100
Query: 176 VLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSA 235
VLDR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 101 VLDRTGLILDIFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE----- 145
Query: 236 RGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGR 295
R GG G + G GET+L+ RR + R +L ++E+VR+ R R AR+R
Sbjct: 146 --RQKGGIG-LRGPGETQLETDRRLLRARIKAILKRLEKVRKQRDQGRRARQRAE----- 197
Query: 296 GLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
+ TV++VGYTNAGKSTL + ++ S++++ +LFATLDP L+ + L +L+DTVGF
Sbjct: 198 -IPTVSLVGYTNAGKSTLFNRMTTSEVYAADQLFATLDPTLRKIELADVGHAILADTVGF 256
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
I LP +LV+AF ATL+E +A LL+HV+DC EH V VL+++G +E +
Sbjct: 257 IRHLPHKLVEAFRATLQETTDASLLLHVIDCYDEERREHIEQVDAVLEEIGAAE---VPV 313
Query: 416 IEVWNKID 423
++V+NKID
Sbjct: 314 LQVYNKID 321
>gi|47214135|emb|CAG01393.1| unnamed protein product [Tetraodon nigroviridis]
Length = 510
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 198/372 (53%), Gaps = 51/372 (13%)
Query: 63 RLFLVQP------RLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQN 116
RL +V P R + T + L EA+ L N+L+ VV
Sbjct: 90 RLVIVHPDVKWGSRKQHLTTAELMLAEAVGLVNTLDNW-----------------TVVDT 132
Query: 117 PSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERAWGKP 175
L + FG G +++ I ++ G + A+FVN LS + +R LE AWG
Sbjct: 133 VVLSTKTPEKKRIFGKGNFQSLTEKIR--QTAG-ITAVFVNVEHLSPLSERELEEAWGVK 189
Query: 176 VLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSA 235
VLDR +++ IF +A TKEAKLQ LA + +SRL + E+ +
Sbjct: 190 VLDRYSVVLHIFRCNARTKEAKLQISLAEIPLLRSRL----------------KNEIANL 233
Query: 236 RGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGR 295
+G G +I G+GET L++Q+R + ER + + +E++RR R + RA R++ +
Sbjct: 234 DQQG-GRSKYIGGSGETLLEVQQRLLKEREMKIRTALEKLRRKRHLLRAQRKQ------Q 286
Query: 296 GLATVAVVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVG 354
V+V+GYTN+GK+TL+ +L+ DS L +LFATLD + + LP+ VL DT+G
Sbjct: 287 EFPMVSVLGYTNSGKTTLIKSLTGDSGLQPKNQLFATLDVTVHAGQLPNHMTVLYVDTIG 346
Query: 355 FISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN 414
F+S LP +L+D+F ATLE++ +DLL+HV D + P + VL VL+ + + + + +
Sbjct: 347 FLSQLPHRLIDSFSATLEDIKHSDLLLHVRDVSHPETLNQKANVLNVLKNLQIPDRLIGS 406
Query: 415 MIEVWNKIDYHD 426
MIEV NKID D
Sbjct: 407 MIEVHNKIDLVD 418
>gi|15618389|ref|NP_224674.1| GTP binding protein [Chlamydophila pneumoniae CWL029]
gi|15836009|ref|NP_300533.1| GTP binding protein [Chlamydophila pneumoniae J138]
gi|81790065|sp|Q9Z873.1|HFLX_CHLPN RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|4376763|gb|AAD18618.1| GTP Binding Protein [Chlamydophila pneumoniae CWL029]
gi|8978848|dbj|BAA98684.1| GTP binding protein [Chlamydophila pneumoniae J138]
Length = 472
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 155/260 (59%), Gaps = 23/260 (8%)
Query: 164 QQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLT 223
QQRNLE+ G VLDR LI+EIF++ A T EA +Q +LA Y RL R+ G
Sbjct: 116 QQRNLEKRLGLVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKRLWGH----- 170
Query: 224 FGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQR 283
+S + G G GF+ G GE +++L RR + ER L +Q++ V + RA +R
Sbjct: 171 ---------LSRQKSGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERR 221
Query: 284 AARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS 343
+ R RG+ T A++GYTN+GKSTL++ L+ +D + + +LFATLDP+ + VLP
Sbjct: 222 KVKSR------RGIPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPG 275
Query: 344 GRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ 403
GR VLL+DTVGFI LP LV AF +TLE D+L+HV+D + P EH T + Q
Sbjct: 276 GRHVLLTDTVGFIRKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQ 335
Query: 404 QVGVSEEKLKNMIEVWNKID 423
++ + + + +I V NK+D
Sbjct: 336 ELKIEKPR---IITVLNKVD 352
>gi|295132086|ref|YP_003582762.1| HflX-like GTP-binding protein [Zunongwangia profunda SM-A87]
gi|294980101|gb|ADF50566.1| HflX-like GTP-binding protein [Zunongwangia profunda SM-A87]
Length = 406
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/325 (37%), Positives = 182/325 (56%), Gaps = 35/325 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ ++ S+ E+ + LS QQ+N+E+ VLDR LI++IF
Sbjct: 60 TFIGSGKMEEVRIYV----SENEIGTAIFDDELSPAQQKNIEKILKCKVLDRTNLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYARTQVELAQYEYLLPRLA------GMWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + ++ S L ++ + + VQR R + L VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDKISLLKKKLATIDKQMEVQRGNRGQ--------LVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ LL+DTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNTISKSEVFAENKLFATLDTTVRKVVI-RNLPFLLTDTVGFIRKLPTQLVESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHD 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ S+ K + V+NKID Y
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEEHIDSVNQILDEIKSSD---KPSVMVFNKIDQYVP 325
Query: 427 EEMGDVEYIDGDDISNFSRAEDKDT 451
EE+ + + + ++++ E K T
Sbjct: 326 EEIAEDDLMTERTTAHYTLTEWKQT 350
>gi|237802803|ref|YP_002887997.1| putative nucleotide-binding protein [Chlamydia trachomatis
B/Jali20/OT]
gi|237804725|ref|YP_002888879.1| putative nucleotide-binding protein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|376282384|ref|YP_005156210.1| putative nucleotide-binding protein [Chlamydia trachomatis A2497]
gi|385270068|ref|YP_005813228.1| GTP-binding protein [Chlamydia trachomatis A2497]
gi|231273025|emb|CAX09938.1| putative nucleotide-binding protein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274037|emb|CAX10831.1| putative nucleotide-binding protein [Chlamydia trachomatis
B/Jali20/OT]
gi|347975208|gb|AEP35229.1| HflX [Chlamydia trachomatis A2497]
gi|371908414|emb|CAX09044.1| putative nucleotide-binding protein [Chlamydia trachomatis A2497]
gi|438690308|emb|CCP49565.1| GTPase HflX [Chlamydia trachomatis A/7249]
gi|438691392|emb|CCP48666.1| GTPase HflX [Chlamydia trachomatis A/5291]
gi|438692765|emb|CCP47767.1| GTPase HflX [Chlamydia trachomatis A/363]
Length = 447
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 165/273 (60%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D +++ +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFA 259
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLP G++VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+ EH T +LQ++G+++ + +I V NK+D
Sbjct: 320 VLEHVETTKAILQELGITQPQ---VITVLNKMD 349
>gi|184201224|ref|YP_001855431.1| putative GTP-binding protein HflX [Kocuria rhizophila DC2201]
gi|183581454|dbj|BAG29925.1| putative GTP-binding protein HflX [Kocuria rhizophila DC2201]
Length = 552
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 162/283 (57%), Gaps = 23/283 (8%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +K + + D + V+A L+ Q+R LE V+DR GLI++IF
Sbjct: 168 TYLGSGKALELKDVVAATGA----DTVIVDAELAPSQRRALEDVVKVKVIDRTGLILDIF 223
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
HA +KE K Q ELA L Y L R+RG GE+ A GR + G G S
Sbjct: 224 AQHAKSKEGKAQVELAQLEYM---LPRLRG---------WGESLSRQAGGRAASGEGIGS 271
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+++L RRRI +R + L +I ++ R +R RRR+ + +VA+ GYT
Sbjct: 272 RGPGETKIELDRRRIRQRMAKLRREIAAMKPARETKRLNRRRNA------VPSVAIAGYT 325
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
NAGKS+L++ L+D+ + + LFATLDP ++ P G L+DTVGF+ LP QLV+A
Sbjct: 326 NAGKSSLLNRLTDAGVLVENALFATLDPTVRKAQTPDGIGYTLADTVGFVRSLPTQLVEA 385
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 409
F +TLEEV +AD++VHV+D + P+ E V VL VG ++
Sbjct: 386 FRSTLEEVADADVIVHVVDASHPDPEGQLKAVRDVLTDVGAND 428
>gi|384449261|ref|YP_005661863.1| putative phage virion morphogenesis protein/GTP binding protein
[Chlamydophila pneumoniae LPCoLN]
gi|269303355|gb|ACZ33455.1| putative phage virion morphogenesis protein/GTP binding protein
[Chlamydophila pneumoniae LPCoLN]
Length = 472
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 155/260 (59%), Gaps = 23/260 (8%)
Query: 164 QQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLT 223
QQRNLE+ G VLDR LI+EIF++ A T EA +Q +LA Y RL R+ G
Sbjct: 116 QQRNLEKRLGLVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKRLWGH----- 170
Query: 224 FGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQR 283
+S + G G GF+ G GE +++L RR + ER L +Q++ V + RA +R
Sbjct: 171 ---------LSRQKSGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERR 221
Query: 284 AARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS 343
+ R RG+ T A++GYTN+GKSTL++ L+ +D + + +LFATLDP+ + VLP
Sbjct: 222 KVKSR------RGIPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPG 275
Query: 344 GRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ 403
GR VLL+DTVGFI LP LV AF +TLE D+L+HV+D + P EH T + Q
Sbjct: 276 GRHVLLTDTVGFIRKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQ 335
Query: 404 QVGVSEEKLKNMIEVWNKID 423
++ + + + +I V NK+D
Sbjct: 336 ELKIEKPR---IITVLNKVD 352
>gi|119474821|ref|ZP_01615174.1| GTP-binding protein HflX [marine gamma proteobacterium HTCC2143]
gi|119451024|gb|EAW32257.1| GTP-binding protein HflX [marine gamma proteobacterium HTCC2143]
Length = 433
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 168/298 (56%), Gaps = 31/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE I+ + + K E+ + N LS Q+RNLE VLDR GLI++IF
Sbjct: 58 FVGSGKVEEIRTQVE--QQKAEV--VLFNHALSPSQERNLESELKCRVLDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLQHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R + ++++VR+ R R AR R + TV++VGYTNA
Sbjct: 156 PGETQLESDRRLLRARIKAISKRLDKVRKQRDQGRRARSRAD------IPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ ++++ +LFATLDP L+ V +P ++L+DTVGFI LP +LV+AF
Sbjct: 210 GKSTLFNTLTQANVYVADQLFATLDPTLRRVSIPDFGPIVLADTVGFIRHLPHKLVEAFR 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
ATLEE ++DLL+HV+DC E++ V VL ++G +E++NKID D
Sbjct: 270 ATLEEAAQSDLLIHVIDCADEEREDNIAQVEVVLNEIGADA---IPRLEIYNKIDLVD 324
>gi|343926997|ref|ZP_08766485.1| GTP-binding protein HflX [Gordonia alkanivorans NBRC 16433]
gi|343763055|dbj|GAA13411.1| GTP-binding protein HflX [Gordonia alkanivorans NBRC 16433]
Length = 485
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 172/304 (56%), Gaps = 30/304 (9%)
Query: 128 TFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G E ++ + GA D + + L+ Q LE+ V+DR LI++
Sbjct: 113 TYIGSGKAEELREIVLATGA------DTVICDGELTPAQLTALEKVVKVKVIDRTALILD 166
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR-GSGGRG 244
IF HA ++E K Q LA + Y L R+RG GE+ A GR GS G
Sbjct: 167 IFAQHATSREGKAQVSLAQMEYM---LPRLRG---------WGESMSRQAGGRAGSNGGV 214
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GET+++ RRRI ER + L +I ++++ R +RAAR R + ++ V G
Sbjct: 215 GLRGPGETKIETDRRRIRERMAKLRREIRDMKKARTTKRAARNRSA------IPSITVAG 268
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKS+LV+A++ + + LFATLDP + L GR V+ +DTVGF+ LP QLV
Sbjct: 269 YTNAGKSSLVNAMTGAGVLVQDALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLV 328
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE--VWNKI 422
+AF +TLEEVV+ADLL+HV+D + P E + V QV+ +V V+EEK + E V NKI
Sbjct: 329 EAFRSTLEEVVDADLLLHVVDGSDPFPMEQISAVRQVISEV-VAEEKAEAPPELLVINKI 387
Query: 423 DYHD 426
D D
Sbjct: 388 DAID 391
>gi|326692195|ref|ZP_08229200.1| GTP-binding protein HflX [Leuconostoc argentinum KCTC 3773]
Length = 432
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/308 (38%), Positives = 172/308 (55%), Gaps = 39/308 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A ++D I N LS Q RNLE+ VLDR GLI++IF
Sbjct: 59 TYFGKGKVE----ELAEAAKTYDVDMIVANDELSPSQIRNLEKLTNTTVLDRTGLILDIF 114
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ +LA L Y+ RL R + + + + G+GG GF S
Sbjct: 115 AQRAQTKEAKLQVQLARLQYQLPRL--------RTSMSVSLDQQT------GTGGAGFTS 160
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G+GET+L+ RRRI + H+ ++ E+ + + + A R + LA VA+VGYT
Sbjct: 161 RGSGETKLEESRRRITSQMVHIRQELAELSKGTSTRSAKRTTNE------LANVALVGYT 214
Query: 307 NAGKSTLVSAL-------SDSD----LFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
NAGKSTL++ L +D+D +F LFATL ++ + LP ++ LLSDTVGF
Sbjct: 215 NAGKSTLMNRLLARFGVGADTDDTKQVFEKDMLFATLTTTVRQLTLPDKKQFLLSDTVGF 274
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
+S LP LV AF +TL+E ADLL+ ++D + + ++ T + L +VGV++ M
Sbjct: 275 VSKLPHNLVSAFKSTLQEAANADLLLQIVDVSDEHYKDMMATTEKTLAEVGVTDVP---M 331
Query: 416 IEVWNKID 423
I V+NK D
Sbjct: 332 ITVYNKAD 339
>gi|33241830|ref|NP_876771.1| GTP binding protein hflX [Chlamydophila pneumoniae TW-183]
gi|33236339|gb|AAP98428.1| GTP binding protein hflX [Chlamydophila pneumoniae TW-183]
Length = 472
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 155/260 (59%), Gaps = 23/260 (8%)
Query: 164 QQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLT 223
QQRNLE+ G VLDR LI+EIF++ A T EA +Q +LA Y RL R+ G
Sbjct: 116 QQRNLEKRLGLVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKRLWGH----- 170
Query: 224 FGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQR 283
+S + G G GF+ G GE +++L RR + ER L +Q++ V + RA +R
Sbjct: 171 ---------LSRQKSGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERR 221
Query: 284 AARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS 343
+ R RG+ T A++GYTN+GKSTL++ L+ +D + + +LFATLDP+ + VLP
Sbjct: 222 KVKSR------RGIPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPG 275
Query: 344 GRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ 403
GR VLL+DTVGFI LP LV AF +TLE D+L+HV+D + P EH T + Q
Sbjct: 276 GRHVLLTDTVGFIRKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQ 335
Query: 404 QVGVSEEKLKNMIEVWNKID 423
++ + + + +I V NK+D
Sbjct: 336 ELKIEKPR---IITVLNKVD 352
>gi|420149042|ref|ZP_14656224.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 335 str.
F0486]
gi|394754268|gb|EJF37701.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 335 str.
F0486]
Length = 401
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 174/305 (57%), Gaps = 35/305 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEIGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLTAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVI-ENLPFLLSDTVGFIRKLPTQLIESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHD 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTN 325
Query: 427 EEMGD 431
EE+ +
Sbjct: 326 EEIAE 330
>gi|399909454|ref|ZP_10778006.1| GTP-binding protein HflX [Halomonas sp. KM-1]
Length = 425
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/301 (41%), Positives = 172/301 (57%), Gaps = 35/301 (11%)
Query: 128 TFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
TF G G +E ++ ++GAE + N LS Q+RNLER VLDR GLI++
Sbjct: 44 TFIGSGKLEELREALQVHGAE------LVIFNHGLSPSQERNLERELKCRVLDRTGLILD 97
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L Y +RLVR G T R GG G
Sbjct: 98 IFAQRARTHEGKLQVELAQLEYMSTRLVR----------GWTHLE-------RQKGGIG- 139
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++++VR R+ R AR R + +V++VGY
Sbjct: 140 LRGPGETQLETDRRLLRARIKAIHKRLDKVRSQRSQNRRARERAE------IPSVSLVGY 193
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL +AL+++ +++ +LFATLDP L+ + + V+L+DTVGFI LP +LV+
Sbjct: 194 TNAGKSTLFNALTEAKVYAADQLFATLDPTLRRLEVGDVGPVVLADTVGFIRHLPHKLVE 253
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATL+E EA LLVHV+D P+ E + V +VL ++G E M++V NKID
Sbjct: 254 AFQATLQEATEASLLVHVIDAADPDRELNVEQVEKVLDEIGALE---VPMLKVMNKIDLL 310
Query: 426 D 426
D
Sbjct: 311 D 311
>gi|289207682|ref|YP_003459748.1| GTP-binding proten HflX [Thioalkalivibrio sp. K90mix]
gi|288943313|gb|ADC71012.1| GTP-binding proten HflX [Thioalkalivibrio sp. K90mix]
Length = 441
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 173/314 (55%), Gaps = 33/314 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G + I+ + E+ G D + N LS Q+RNLER VLDR GLI++IF
Sbjct: 59 FVGAGKADEIRAAV---EAHGA-DVVIFNHALSPSQERNLERHLQCRVLDRAGLILDIFA 114
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 115 QRARSHEGKLQVELAQLRHMATRLVR----------GWTHLE-------RQKGGIG-LRG 156
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R H+ ++E+V RTR R AR R+ + TV++VGYTNA
Sbjct: 157 PGETQLETDRRLLAARIKHIERRLEKVERTREQGRQARLRNE------IPTVSLVGYTNA 210
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ SD++ +LFATLDP L+ + L + ++L+DTVGF+ DLP +LV AF
Sbjct: 211 GKSTLFNRLTHSDVYEADQLFATLDPTLRRLDLAPHQSLILADTVGFVRDLPHELVAAFK 270
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE- 427
ATL E EA LL+HV+D P E V VL+++G + V+NKID +
Sbjct: 271 ATLTETREAALLLHVIDAADPEREARIRQVEAVLEEIGAQD---VPCWRVYNKIDRLEST 327
Query: 428 -EMGDVEYIDGDDI 440
+ + + GDD+
Sbjct: 328 PDAAEARFGSGDDV 341
>gi|146298932|ref|YP_001193523.1| HSR1-like GTP-binding protein [Flavobacterium johnsoniae UW101]
gi|146153350|gb|ABQ04204.1| GTP-binding protein, HSR1-related [Flavobacterium johnsoniae UW101]
Length = 409
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 184/342 (53%), Gaps = 34/342 (9%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
+ N EE+ + Y D F V++ S K + TF G G ++ I +
Sbjct: 16 GIVTQNQSEEKLNEYLDELEFLTFTAGGEVIKRFSQKMERPNPKTFVGTGKIDEINLFV- 74
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
+ ++ + + L+ QQ+N+ R +LDR LI++IF A T A+ Q ELA
Sbjct: 75 ---KENKISTVIFDDELTPSQQKNISRIIDCKILDRTNLILDIFAQRAETSYARTQVELA 131
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
+Y RL G T E R GG G + G GETE++ RR + +
Sbjct: 132 QCIYLLPRL------SGLWTHLE-----------RQKGGIG-MRGPGETEIETDRRIVRD 173
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R S L +I+ + + ++QR+ R + VA+VGYTN GKSTL++A+ S++F
Sbjct: 174 RISLLKEKIKTIDKQMSIQRSNRG--------AMVRVALVGYTNVGKSTLMNAIGKSEVF 225
Query: 324 SDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 383
+ +LFATLD ++ VV+ LLSDTVGFI LP QLVD+F +TL+EV EADLL+HV
Sbjct: 226 VENKLFATLDTTVRKVVI-KNLPFLLSDTVGFIRKLPTQLVDSFKSTLDEVREADLLLHV 284
Query: 384 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
+D + P+ E+H +V Q+LQ++ ++ K I V+NKID +
Sbjct: 285 VDISHPDFEDHIESVNQILQEIKSND---KPTIMVFNKIDAY 323
>gi|386262350|ref|YP_004943206.2| GTP-binding protein HflX [Flavobacterium columnare ATCC 49512]
gi|372863672|gb|AEW87413.2| GTP-binding protein HflX [Flavobacterium columnare ATCC 49512]
Length = 406
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 174/313 (55%), Gaps = 34/313 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + K K TF G G +E I +I + ++ + + LS QQ+N+ R
Sbjct: 45 VVKRFTQKMDKPNPKTFVGTGKLEQINLYI----KENDIKTVIFDDELSPAQQKNITREL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 DCKVLDRTNLILDIFAQRAETSYARTQVELAQCQYLLPRLT------GMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + +R + L +I+ + + A+QR+ R
Sbjct: 149 -----RQRGGIG-MRGPGETEIETDRRIVRDRIALLKEKIKTIDKQMAIQRSNRG----- 197
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+ VA+VGYTN GKSTL++A+ S++F + +LFATLD ++ VV+ + LLSDT
Sbjct: 198 ---AMVRVALVGYTNVGKSTLMNAVGKSEVFVENKLFATLDTTVRKVVIKN-LPFLLSDT 253
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI LP QLV++F +TL+EV EADLL+H++D + P E+H +V Q+LQ + S+
Sbjct: 254 VGFIRKLPTQLVESFKSTLDEVREADLLLHIVDISHPEFEDHIESVNQILQDIKSSD--- 310
Query: 413 KNMIEVWNKIDYH 425
K I V+NKID +
Sbjct: 311 KPTIMVFNKIDSY 323
>gi|430762038|ref|YP_007217895.1| GTP-binding protein HflX [Thioalkalivibrio nitratireducens DSM
14787]
gi|430011662|gb|AGA34414.1| GTP-binding protein HflX [Thioalkalivibrio nitratireducens DSM
14787]
Length = 454
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 169/295 (57%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G + I + E+ G AIF N LS Q+RNLER VLDR GLI++IF
Sbjct: 58 FVGSGKADEIAAAV---EATGADLAIF-NHPLSPSQERNLERHLKCRVLDRSGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 114 QRARSHEGKLQVELAQLRHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R H+ ++E+V+R R R ARRR+ TVA+VGYTNA
Sbjct: 156 PGETQLETDRRLLAARIKHIERRLEKVQRAREQGRQARRRNE------TPTVALVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+++ +++ +LFATLDP L+ + L + V+L+DTVGF+ DLP +L+ AF
Sbjct: 210 GKSTLFNRLTEAQVYAADQLFATLDPTLRRLDLAPHQSVILADTVGFVRDLPHELIAAFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATL E EA LL+HV+D + P E H V VL+++G E + V+NKID
Sbjct: 270 ATLTETREAALLLHVIDASDPEREVHVEQVESVLEEIGAGEVPIWC---VYNKID 321
>gi|16752564|ref|NP_444826.1| GTP-binding protein HflX [Chlamydophila pneumoniae AR39]
gi|7189200|gb|AAF38134.1| GTP-binding protein HflX, putative [Chlamydophila pneumoniae AR39]
Length = 472
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 155/260 (59%), Gaps = 23/260 (8%)
Query: 164 QQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLT 223
QQRNLE+ G VLDR LI+EIF++ A T EA +Q +LA Y RL R+ G
Sbjct: 116 QQRNLEKRLGLVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKRLWGH----- 170
Query: 224 FGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQR 283
+S + G G GF+ G GE +++L RR + ER L +Q++ V + RA +R
Sbjct: 171 ---------LSRQKSGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERR 221
Query: 284 AARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS 343
+ R RG+ T A++GYTN+GKSTL++ L+ +D + + +LFATLDP+ + VLP
Sbjct: 222 KVKSR------RGIPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPG 275
Query: 344 GRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ 403
GR VLL+DTVGFI LP LV AF +TLE D+L+HV+D + P EH T + Q
Sbjct: 276 GRHVLLTDTVGFIRKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQ 335
Query: 404 QVGVSEEKLKNMIEVWNKID 423
++ + + + +I V NK+D
Sbjct: 336 ELKIEKPR---IITVLNKVD 352
>gi|406594858|ref|YP_006741420.1| GTP-binding proten HflX [Chlamydia psittaci MN]
gi|405783290|gb|AFS22038.1| GTP-binding proten HflX [Chlamydia psittaci MN]
Length = 462
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 161/273 (58%), Gaps = 22/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLPSG++VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T ++L+++GV K+ I V NKID
Sbjct: 321 AFEHIETTKEILKELGVDHPKI---ITVLNKID 350
>gi|329942586|ref|ZP_08291396.1| GTP-binding proten HflX [Chlamydophila psittaci Cal10]
gi|332287216|ref|YP_004422117.1| GTP-binding protein [Chlamydophila psittaci 6BC]
gi|384450370|ref|YP_005662970.1| GTP-binding protein HflX [Chlamydophila psittaci 6BC]
gi|384451369|ref|YP_005663967.1| GTP-binding protein [Chlamydophila psittaci 01DC11]
gi|384452345|ref|YP_005664942.1| GTP-binding protein [Chlamydophila psittaci 08DC60]
gi|384453319|ref|YP_005665915.1| GTP-binding protein [Chlamydophila psittaci C19/98]
gi|384454297|ref|YP_005666892.1| GTP-binding protein [Chlamydophila psittaci 02DC15]
gi|392376467|ref|YP_004064245.1| putative GTP-binding protein [Chlamydophila psittaci RD1]
gi|407453763|ref|YP_006732871.1| GTP-binding proten HflX [Chlamydia psittaci 84/55]
gi|407456466|ref|YP_006735039.1| GTP-binding proten HflX [Chlamydia psittaci VS225]
gi|449070921|ref|YP_007438001.1| putative GTP-binding protein [Chlamydophila psittaci Mat116]
gi|313847810|emb|CBY16801.1| putative GTP-binding protein [Chlamydophila psittaci RD1]
gi|325506512|gb|ADZ18150.1| GTP-binding protein [Chlamydophila psittaci 6BC]
gi|328815496|gb|EGF85484.1| GTP-binding proten HflX [Chlamydophila psittaci Cal10]
gi|328914464|gb|AEB55297.1| GTP-binding protein HflX [Chlamydophila psittaci 6BC]
gi|334692100|gb|AEG85319.1| GTP-binding protein [Chlamydophila psittaci C19/98]
gi|334693079|gb|AEG86297.1| GTP-binding protein [Chlamydophila psittaci 01DC11]
gi|334694054|gb|AEG87271.1| GTP-binding protein [Chlamydophila psittaci 02DC15]
gi|334695034|gb|AEG88250.1| GTP-binding protein [Chlamydophila psittaci 08DC60]
gi|405780522|gb|AFS19272.1| GTP-binding proten HflX [Chlamydia psittaci 84/55]
gi|405783727|gb|AFS22474.1| GTP-binding proten HflX [Chlamydia psittaci VS225]
gi|449039429|gb|AGE74853.1| putative GTP-binding protein [Chlamydophila psittaci Mat116]
Length = 462
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 161/273 (58%), Gaps = 22/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLPSG++VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T ++L+++GV K +I V NKID
Sbjct: 321 AFEHIETTKEILKELGVDHPK---IITVLNKID 350
>gi|332879823|ref|ZP_08447512.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332682200|gb|EGJ55108.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 396
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 195/363 (53%), Gaps = 47/363 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ ++ + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQYV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLSAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVI-ENLPFLLSDTVGFIRKLPTQLIESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID +
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTH 325
Query: 428 EMGDVEYIDGDDIS------NFSRAEDKDTTSEPV--DVECIDNYGGDDADNNDGFVSED 479
E+ I DD++ +F+ E K T + V DV I ++ + V E
Sbjct: 326 EV-----IAEDDLATERTTKHFTLEEWKQTWMQKVGKDVLFISALNKENLEEFRKVVYEK 380
Query: 480 LGE 482
+ E
Sbjct: 381 VKE 383
>gi|357406389|ref|YP_004918313.1| GTP-binding protein HflX [Methylomicrobium alcaliphilum 20Z]
gi|351719054|emb|CCE24728.1| GTP-binding protein HflX [Methylomicrobium alcaliphilum 20Z]
Length = 420
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 188/334 (56%), Gaps = 42/334 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E +K I S+ D + N LS Q+RNLE+A V+DR GLI++IF
Sbjct: 55 FIGTGKLEELKQAI----SEYSADIVLFNHPLSPSQERNLEKALEVRVVDRNGLILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 111 QRAQTFEGKLQVELAQLRHLSTRLIR----------GWTHLE-------RQKGGIG-LRG 152
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA---TVAVVGY 305
GET+L+ RR + R + QI+ R + + A++RH G R A +V++VGY
Sbjct: 153 PGETQLETDRRLLGVR----IKQIQ-----RRLNKVAKQRHQGRSKRKKAEVPSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + ++ +++++ +LFATLDP L+ VLP+ +++L+DTVGFI LP +LV
Sbjct: 204 TNAGKSTLFNTMTGAEIYAADQLFATLDPTLRQCVLPNNAEIVLADTVGFIRHLPHELVA 263
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF +TL+E EA+LL+HV+D A + +E V QVL+ + E + ++++NKID
Sbjct: 264 AFRSTLQEASEANLLLHVIDANAEDRDETIAQVNQVLEDIEADEIR---QLQIFNKIDL- 319
Query: 426 DEEMGDVE-YIDGDDISNFSRAEDKDTTSEPVDV 458
+ D+E +ID DD N R T +D+
Sbjct: 320 ---LPDIEPHIDRDDEGNVLRVWLSAETGAGIDL 350
>gi|107104042|ref|ZP_01367960.1| hypothetical protein PaerPA_01005115 [Pseudomonas aeruginosa PACS2]
gi|355643057|ref|ZP_09053066.1| GTP-binding protein HflX [Pseudomonas sp. 2_1_26]
gi|354830057|gb|EHF14116.1| GTP-binding protein HflX [Pseudomonas sp. 2_1_26]
Length = 419
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 137/354 (38%), Positives = 193/354 (54%), Gaps = 38/354 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ + A G G VE + + AE+ ++ + N L+ Q+RNLERA+ VL
Sbjct: 33 SVSRHQPSAKYLIGSGKVEELHDLVK-AEN---VELVIFNHTLTPSQERNLERAFECRVL 88
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 89 DRTGLILDIFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE------- 131
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +D +
Sbjct: 132 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKR---AD---I 184
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
V++VGYTNAGKSTL +AL+ S++++ +LFATLDP L+ + L V+L+DTVGFI
Sbjct: 185 PAVSLVGYTNAGKSTLFNALTASEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFIR 244
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV+AF ATLEE ADLL+HV+D P + VL VL ++G +E M+E
Sbjct: 245 HLPHKLVEAFRATLEESSNADLLLHVIDAYEPERDAQVEQVLAVLGEIGANE---LPMLE 301
Query: 418 VWNKIDYHDEEMGDVE-YIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDD 468
V+NK+D + VE +I DD R T E +D+ + I G+D
Sbjct: 302 VYNKVDL----LPSVEPHIQRDDSGKPVRVWLSAQTGEGLDLLRQAIAELLGED 351
>gi|153855189|ref|ZP_01996373.1| hypothetical protein DORLON_02387 [Dorea longicatena DSM 13814]
gi|149752358|gb|EDM62289.1| GTP-binding protein HflX [Dorea longicatena DSM 13814]
Length = 422
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 184/344 (53%), Gaps = 35/344 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E +K I + G I + LS Q +NL+ V+DR +I++IF
Sbjct: 57 TYVGKGKIEELKSMIWELRATG----IVCDDELSPAQMKNLQDELDVKVMDRTLIILDIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A A T E K+Q ELA L Y+++RL RL G
Sbjct: 113 AARASTSEGKIQVELAQLKYQQTRLAGFGKAMSRLGGGIGTRG----------------- 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GE +L++ RR I R + L ++++V++ R V R R R + A+VGYTN
Sbjct: 156 -PGEKKLEMDRRLIKSRIAQLNRELKDVKKHREVTREQRSRSH------IPVAAIVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL++ L+ + +F++ +LFATLDP + + LPSG+++L++DTVGFI LP L++AF
Sbjct: 209 AGKSTLLNTLTGAGIFAEDKLFATLDPTTRDLKLPSGQEILMTDTVGFIRKLPHHLIEAF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE-------KLKNMIEVWN 420
+TLEE AD+++HV+D + P ++E TV + LQ +GV ++ K+ M ++W
Sbjct: 269 RSTLEEARYADIILHVVDASNPQMDEQMHTVYETLQNLGVKDKPVITVFNKIDRMEDIWV 328
Query: 421 KIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNY 464
D H + + G+ I+ F ++ + + V++E + Y
Sbjct: 329 PRDLHADYYVKISARTGEGITEFLQSVEAVLREQKVEIEALYPY 372
>gi|383449394|ref|YP_005356115.1| GTP-binding protein HflX [Flavobacterium indicum GPTSA100-9]
gi|380501016|emb|CCG52058.1| GTP-binding protein HflX [Flavobacterium indicum GPTSA100-9]
Length = 407
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 183/340 (53%), Gaps = 35/340 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + K K TF G G +E I +I E K + + L+ QQ+N+ R
Sbjct: 45 VVKRFTQKMDKPNPKTFVGSGKLEEINYYIKDNEVK----TVIFDDELTPAQQKNITREL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 DCKVLDRTNLILDIFAQRAETSYARTQVELAQCQYLLPRLT------GMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + +R + L +I+ + + A+QR+ R
Sbjct: 149 -----RQRGGIG-MRGPGETEIETDRRIVRDRIALLKEKIKTIDKQMAIQRSNRG----- 197
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+ VA+VGYTN GKSTL++A+ S++F + +LFATLD ++ V+ LLSDT
Sbjct: 198 ---AMVRVALVGYTNVGKSTLMNAVGKSEVFVENKLFATLDTTVRKTVI-KNLPFLLSDT 253
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI LP QLV++F +TL+EV EADLL+HV+D + P+ E+H +V Q+LQ + ++
Sbjct: 254 VGFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHPDFEDHIESVNQILQDIKSAD--- 310
Query: 413 KNMIEVWNKID-YHDEEMGDVEYIDGDDISNFSRAEDKDT 451
K I V+NKID Y +++ + + NFS + K T
Sbjct: 311 KPTIMVFNKIDAYSYDKIDETDITIEKTTKNFSLEDWKKT 350
>gi|424794849|ref|ZP_18220772.1| GTP-binding protein, probable [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422795739|gb|EKU24373.1| GTP-binding protein, probable [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 441
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 179/325 (55%), Gaps = 33/325 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D I VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEASGA-DLILVNHALSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RL+R G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLIR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R AR R L +AV
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQKRLEKVEVQHTQMRRARVRSE------LPRIAV 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL +AL+ ++ ++ +LFATLDP ++ + LP G +L+DTVGF+ +LP +
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYAADKLFATLDPTVRRIALPGG-NAMLADTVGFVRNLPHE 262
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E EAD L+HV+D P EE V +VL VG + L ++ V+NKI
Sbjct: 263 LVAAFRSTLSEAREADFLLHVVDAADPLREERIAQVDEVLHAVGAGD--LPQLL-VFNKI 319
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAE 447
D E DV + D + + +R E
Sbjct: 320 DRI--EGADVRHDAQDGVPDEARRE 342
>gi|406038553|ref|ZP_11045908.1| GTP-binding proten HflX [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 445
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 178/316 (56%), Gaps = 31/316 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
++++ +++ K F G G E I + ++ + + + LS Q+RNLE+
Sbjct: 43 ILEHLTVQRNKPDPKFFVGSGKAEEIAQLVEHVDA----ELVIFDHSLSPAQERNLEKIM 98
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI++IF A T E KLQ ELA L Y +RL+R G A
Sbjct: 99 KCRVIDRTGLILDIFAQRARTHEGKLQVELAQLKYLSTRLIR-------------GWAAG 145
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+ G G + G GET+L+ RR I R S L ++ +V+ TR RAAR++
Sbjct: 146 FEQQKGGIG----LKGPGETQLETDRRLIKVRISQLKDKLVKVQHTRMQGRAARQK---- 197
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+ TV++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ + V+L+DT
Sbjct: 198 --AAIPTVSLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTVVLADT 255
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+ DL LV++F ATLEE +EA LL+HV+D +P++ E V VL+++G E L
Sbjct: 256 VGFVRDLQHDLVESFKATLEETLEATLLLHVIDSHSPDMHEQIEAVEGVLKEIGADEPVL 315
Query: 413 KNMIEVWNKIDYHDEE 428
+ V+NKID +E
Sbjct: 316 R----VYNKIDLSGDE 327
>gi|418274502|ref|ZP_12890000.1| GTPase, HflX subfamily [Lactobacillus plantarum subsp. plantarum
NC8]
gi|376010068|gb|EHS83394.1| GTPase, HflX subfamily [Lactobacillus plantarum subsp. plantarum
NC8]
Length = 431
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 169/303 (55%), Gaps = 30/303 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TFFG G V IK + +L + +NA L+ Q RNLE ++DR GLI+EIF
Sbjct: 57 TFFGKGKVVEIK----EVAAANDLHIMVINADLTPSQVRNLEEQTDIQIIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL R + + + +A G G G
Sbjct: 113 GNRARSKEAKLQVKIAQLQYQLPRL--------RTSISNRLDQQAGAAAGGGGGFTN--R 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR I +R SH +++E+ + V+R+ R D GL VA+VGYTN
Sbjct: 163 GAGETQLELNRRTIQDRISHAKHELKELNKDEVVRRSQR------DKAGLPNVALVGYTN 216
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++ L D +F LFATLD ++ + P +++LLSDTVGF+SDLP
Sbjct: 217 AGKSTTMNGLVKLFGKGEDKQVFEKDMLFATLDTSIRQLTFPDNKQLLLSDTVGFVSDLP 276
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
L++AF +TL E ADLL+ V++ P+ +E T + L+++GV + MI +N
Sbjct: 277 HNLINAFRSTLAEAANADLLIQVINYADPHYKEMMATTEKTLKEIGVHDVP---MIYAFN 333
Query: 421 KID 423
K D
Sbjct: 334 KAD 336
>gi|213962424|ref|ZP_03390687.1| GTP-binding protein HflX [Capnocytophaga sputigena Capno]
gi|213955090|gb|EEB66409.1| GTP-binding protein HflX [Capnocytophaga sputigena Capno]
Length = 401
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 174/305 (57%), Gaps = 35/305 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLSAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVI-ENLPFLLSDTVGFIRKLPTQLIESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHD 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTN 325
Query: 427 EEMGD 431
EE+ +
Sbjct: 326 EEIAE 330
>gi|116053092|ref|YP_793411.1| GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218894038|ref|YP_002442907.1| putative GTP-binding protein [Pseudomonas aeruginosa LESB58]
gi|254244166|ref|ZP_04937488.1| hypothetical protein PA2G_05009 [Pseudomonas aeruginosa 2192]
gi|296391783|ref|ZP_06881258.1| GTP-binding protein HflX [Pseudomonas aeruginosa PAb1]
gi|313109944|ref|ZP_07795872.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016]
gi|386061114|ref|YP_005977636.1| putative GTP-binding protein [Pseudomonas aeruginosa M18]
gi|386063548|ref|YP_005978852.1| putative GTP-binding protein [Pseudomonas aeruginosa NCGM2.S1]
gi|416865087|ref|ZP_11915663.1| GTP-binding protein HflX [Pseudomonas aeruginosa 138244]
gi|416874089|ref|ZP_11917920.1| GTP-binding protein HflX [Pseudomonas aeruginosa 152504]
gi|421170761|ref|ZP_15628686.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 700888]
gi|421177198|ref|ZP_15634854.1| GTP-binding protein [Pseudomonas aeruginosa CI27]
gi|424944265|ref|ZP_18360028.1| probable GTP-binding protein [Pseudomonas aeruginosa NCMG1179]
gi|451985424|ref|ZP_21933644.1| GTP-binding protein HflX [Pseudomonas aeruginosa 18A]
gi|115588313|gb|ABJ14328.1| putative GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126197544|gb|EAZ61607.1| hypothetical protein PA2G_05009 [Pseudomonas aeruginosa 2192]
gi|218774266|emb|CAW30083.1| probable GTP-binding protein [Pseudomonas aeruginosa LESB58]
gi|310882374|gb|EFQ40968.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016]
gi|334834621|gb|EGM13564.1| GTP-binding protein HflX [Pseudomonas aeruginosa 138244]
gi|334843937|gb|EGM22519.1| GTP-binding protein HflX [Pseudomonas aeruginosa 152504]
gi|346060711|dbj|GAA20594.1| probable GTP-binding protein [Pseudomonas aeruginosa NCMG1179]
gi|347307420|gb|AEO77534.1| putative GTP-binding protein [Pseudomonas aeruginosa M18]
gi|348032107|dbj|BAK87467.1| putative GTP-binding protein [Pseudomonas aeruginosa NCGM2.S1]
gi|404522420|gb|EKA32923.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 700888]
gi|404529842|gb|EKA39862.1| GTP-binding protein [Pseudomonas aeruginosa CI27]
gi|451756945|emb|CCQ86167.1| GTP-binding protein HflX [Pseudomonas aeruginosa 18A]
gi|453046453|gb|EME94169.1| GTP-binding protein HflX [Pseudomonas aeruginosa PA21_ST175]
Length = 433
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 137/354 (38%), Positives = 193/354 (54%), Gaps = 38/354 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ + A G G VE + + AE+ ++ + N L+ Q+RNLERA+ VL
Sbjct: 47 SVSRHQPSAKYLIGSGKVEELHDLVK-AEN---VELVIFNHTLTPSQERNLERAFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +D +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKR---AD---I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
V++VGYTNAGKSTL +AL+ S++++ +LFATLDP L+ + L V+L+DTVGFI
Sbjct: 199 PAVSLVGYTNAGKSTLFNALTASEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFIR 258
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV+AF ATLEE ADLL+HV+D P + VL VL ++G +E M+E
Sbjct: 259 HLPHKLVEAFRATLEESSNADLLLHVIDAYEPERDAQVEQVLAVLGEIGANE---LPMLE 315
Query: 418 VWNKIDYHDEEMGDVE-YIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDD 468
V+NK+D + VE +I DD R T E +D+ + I G+D
Sbjct: 316 VYNKVDL----LPSVEPHIQRDDSGKPVRVWLSAQTGEGLDLLRQAIAELLGED 365
>gi|410858244|ref|YP_006974184.1| putative GTP-binding protein [Chlamydia psittaci 01DC12]
gi|410811139|emb|CCO01783.1| putative GTP-binding protein [Chlamydia psittaci 01DC12]
Length = 462
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 161/273 (58%), Gaps = 22/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLPSG++VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T ++L+++GV K +I V NKID
Sbjct: 321 AFEHIETTKEILKELGVDHPK---IITVLNKID 350
>gi|423342807|ref|ZP_17320521.1| GTP-binding protein HflX [Parabacteroides johnsonii CL02T12C29]
gi|409217062|gb|EKN10041.1| GTP-binding protein HflX [Parabacteroides johnsonii CL02T12C29]
Length = 403
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 167/296 (56%), Gaps = 34/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q RN+E+ +LDR LI++IF
Sbjct: 62 TFVGSGKLQEIKGYV----VENEIGLVIFDDELSAKQLRNIEKELQVKILDRTNLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 ARRAQTAHAKTQVELAQYKYMLPRLTRLW-----------------THLERQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ +R IL++ S L + E+ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGETQLETDKRIILDKISKLKRDLVEIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ LS SD+F++ +LFATLD ++ V++ LLSDTVGFI LP +LV++F
Sbjct: 212 VGKSTLMNQLSKSDVFAENKLFATLDTTVRKVIV-DNLPFLLSDTVGFIRKLPTELVESF 270
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+EV EADLLVHV+D + P EE V + L ++ +E K MI V+NKID
Sbjct: 271 KSTLDEVREADLLVHVVDISHPTFEEQIEVVNRTLSEIDKAE---KPMIMVFNKID 323
>gi|339491260|ref|YP_004705765.1| GTPase [Leuconostoc sp. C2]
gi|338852932|gb|AEJ31142.1| GTPase [Leuconostoc sp. C2]
Length = 432
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/308 (40%), Positives = 171/308 (55%), Gaps = 39/308 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A E+D I N LS Q RNLE+A VLDR GLI++IF
Sbjct: 59 TYFGKGKVE----ELAEAVKTYEVDMIVANDELSPSQIRNLEKATQATVLDRTGLILDIF 114
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ +LA L Y+ RL R + + + + G+GG GF S
Sbjct: 115 AQRAQTKEAKLQVQLARLQYQLPRL--------RTSMSVSLDQQT------GAGGGGFTS 160
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L+ RRRI + H+ + ++ T+ A +RH L VA+VGYT
Sbjct: 161 RGAGETKLEESRRRITAQMVHIRQDLADL--TKGETTRASKRHTND----LPNVALVGYT 214
Query: 307 NAGKSTLVSAL-------SDSD----LFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
NAGKSTL++ L +D+D +F LFATL+ ++ + LP ++ LLSDTVGF
Sbjct: 215 NAGKSTLMNRLLERFGVGADNDESKQVFEKDMLFATLNTTIRQLTLPDKKQFLLSDTVGF 274
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
+S LP LV F +TL+E ADLL+ V+D + + +E T + L +VGVS+ M
Sbjct: 275 VSKLPHNLVATFKSTLQEAAHADLLLQVVDISDEHYKEMMATTEKTLAEVGVSDVP---M 331
Query: 416 IEVWNKID 423
I ++NK D
Sbjct: 332 ITIYNKAD 339
>gi|153808667|ref|ZP_01961335.1| hypothetical protein BACCAC_02966 [Bacteroides caccae ATCC 43185]
gi|423220751|ref|ZP_17207245.1| GTP-binding protein HflX [Bacteroides caccae CL03T12C61]
gi|149128493|gb|EDM19711.1| GTP-binding protein HflX [Bacteroides caccae ATCC 43185]
gi|392622797|gb|EIY16912.1| GTP-binding protein HflX [Bacteroides caccae CL03T12C61]
Length = 418
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 181/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I N E + E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIKQYIRNEEEEERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTMMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 249 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPG 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L ++G K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLAEIGGGG---KPMILVFNKIDAY 339
>gi|429747743|ref|ZP_19280991.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 380 str.
F0488]
gi|429162422|gb|EKY04743.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 380 str.
F0488]
Length = 401
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 174/305 (57%), Gaps = 35/305 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLTAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVI-ENLPFLLSDTVGFIRKLPTQLIESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHD 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTN 325
Query: 427 EEMGD 431
EE+ +
Sbjct: 326 EEIAE 330
>gi|406593201|ref|YP_006740380.1| GTP-binding proten HflX [Chlamydia psittaci NJ1]
gi|405789073|gb|AFS27815.1| GTP-binding proten HflX [Chlamydia psittaci NJ1]
Length = 462
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 160/270 (59%), Gaps = 22/270 (8%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+ V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y RL
Sbjct: 103 LIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLPRLK 162
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
R+ G R + G G GF+ G GE +++L RR I ER L ++
Sbjct: 163 RMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTLDLK 209
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLD 333
V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFATLD
Sbjct: 210 SVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFATLD 263
Query: 334 PRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEE 393
P+ + VLPSG++VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P E
Sbjct: 264 PKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPLAFE 323
Query: 394 HRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
H T ++L+++GV K +I V NKID
Sbjct: 324 HIETTKEILKELGVDHPK---IITVLNKID 350
>gi|256819322|ref|YP_003140601.1| GTP-binding proten HflX [Capnocytophaga ochracea DSM 7271]
gi|315224767|ref|ZP_07866589.1| GTP-binding protein HflX [Capnocytophaga ochracea F0287]
gi|420160213|ref|ZP_14666998.1| GTP-binding protein HflX [Capnocytophaga ochracea str. Holt 25]
gi|256580905|gb|ACU92040.1| GTP-binding proten HflX [Capnocytophaga ochracea DSM 7271]
gi|314945260|gb|EFS97287.1| GTP-binding protein HflX [Capnocytophaga ochracea F0287]
gi|394760793|gb|EJF43284.1| GTP-binding protein HflX [Capnocytophaga ochracea str. Holt 25]
Length = 401
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 174/305 (57%), Gaps = 35/305 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLTAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVI-ENLPFLLSDTVGFIRKLPTQLIESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHD 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTN 325
Query: 427 EEMGD 431
EE+ +
Sbjct: 326 EEIAE 330
>gi|429755468|ref|ZP_19288120.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 324 str.
F0483]
gi|429174206|gb|EKY15692.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 324 str.
F0483]
Length = 401
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 174/305 (57%), Gaps = 35/305 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLTAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVI-ENLPFLLSDTVGFIRKLPTQLIESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHD 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTN 325
Query: 427 EEMGD 431
EE+ +
Sbjct: 326 EEIAE 330
>gi|146305671|ref|YP_001186136.1| HSR1-like GTP-binding protein [Pseudomonas mendocina ymp]
gi|421505259|ref|ZP_15952197.1| GTP-binding protein HflX [Pseudomonas mendocina DLHK]
gi|145573872|gb|ABP83404.1| GTP-binding protein HflX [Pseudomonas mendocina ymp]
gi|400343668|gb|EJO92040.1| GTP-binding protein HflX [Pseudomonas mendocina DLHK]
Length = 433
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 174/306 (56%), Gaps = 31/306 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ S + A G G VE ++ + E+ + + N L+ Q+RNLERA+ VL
Sbjct: 47 SVPSSRLTAKYLIGSGKVEELRDQVRAIEA----ELVIFNHTLTPSQERNLERAFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLDHMSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +D +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQKLEKVRSQREQARRGRKR---AD---I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
+V++VGYTNAGKSTL +AL+ S++++ +LFATLDP L+ + L ++L+DTVGFI
Sbjct: 199 PSVSLVGYTNAGKSTLFNALTASEVYAADQLFATLDPTLRRLELDDLGPIVLADTVGFIR 258
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV+AF ATLEE +DLL+HV+D P V VL+++G E M+E
Sbjct: 259 HLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMAQIEQVQAVLKEIGAHE---LPMLE 315
Query: 418 VWNKID 423
V+NK+D
Sbjct: 316 VYNKLD 321
>gi|218258196|ref|ZP_03474598.1| hypothetical protein PRABACTJOHN_00252 [Parabacteroides johnsonii
DSM 18315]
gi|218225691|gb|EEC98341.1| hypothetical protein PRABACTJOHN_00252 [Parabacteroides johnsonii
DSM 18315]
Length = 403
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 167/296 (56%), Gaps = 34/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q RN+E+ +LDR LI++IF
Sbjct: 62 TFVGSGKLQEIKEYV----VENEIGLVIFDDELSAKQLRNIEKELQVKILDRTNLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 ARRAQTAHAKTQVELAQYKYMLPRLTRLW-----------------THLERQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ +R IL++ S L + E+ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGETQLETDKRIILDKISKLKRDLVEIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ LS SD+F++ +LFATLD ++ V++ LLSDTVGFI LP +LV++F
Sbjct: 212 VGKSTLMNQLSKSDVFAENKLFATLDTTVRKVIV-DNLPFLLSDTVGFIRKLPTELVESF 270
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+EV EADLLVHV+D + P EE V + L ++ +E K MI V+NKID
Sbjct: 271 KSTLDEVREADLLVHVVDISHPTFEEQIEVVNRTLSEIDKAE---KPMIMVFNKID 323
>gi|402493727|ref|ZP_10840477.1| GTP-binding protein HflX [Aquimarina agarilytica ZC1]
Length = 409
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 180/329 (54%), Gaps = 39/329 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + K + TF G G +E ++ ++ + ++ + + L+ QQ+N+E+
Sbjct: 45 VVKRFTQKMQMPNSKTFIGSGKMEEVQAYV----EQHDIGTVVFDDELTPSQQKNIEKIL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
++DR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 KAKIIDRTNLILDIFAQRAQTSYARTQVELAQYQYLLPRLA------GMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + +R S L ++++ + R A QR R +
Sbjct: 149 -----RQKGGIG-MRGPGETEIETDRRIVRDRISLLKNKLKTIDRQMATQRGNRGK---- 198
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
L VA+VGYTN GKSTL++ +S S +F++ +LFATLD ++ VV+ LLSDT
Sbjct: 199 ----LVRVALVGYTNVGKSTLMNVISKSKVFAENKLFATLDTTVRKVVI-GNLPFLLSDT 253
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI LP QLV++F +TL+EV EADLL+HV+D + P E+H +V +L ++ +
Sbjct: 254 VGFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHPQFEDHIESVNTILNEIDCKD--- 310
Query: 413 KNMIEVWNKIDYHDEEMGDVEYIDGDDIS 441
K I V+NKID + E ID DD++
Sbjct: 311 KRTIMVFNKIDAYTHET-----IDDDDLT 334
>gi|336416539|ref|ZP_08596872.1| GTP-binding protein HflX [Bacteroides ovatus 3_8_47FAA]
gi|335937596|gb|EGM99494.1| GTP-binding protein HflX [Bacteroides ovatus 3_8_47FAA]
Length = 420
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 183/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F E VV+ + K A + T+ G G +E I+ +I+ E ++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIRQYIHDEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ ++ + +A QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLADIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTMMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LV++F +TL+EV EADLLVHV+D + P
Sbjct: 249 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVESFKSTLDEVREADLLVHVVDISHPG 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L ++G S K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLAEIGGSG---KPMILVFNKIDAY 339
>gi|380510806|ref|ZP_09854213.1| GTP-binding protein [Xanthomonas sacchari NCPPB 4393]
Length = 441
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 179/320 (55%), Gaps = 33/320 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E +K A++ G D + VN LS Q+RNLE+ + V+DR GLI++IF
Sbjct: 56 TLIGSGKLEEVKA---AADASGA-DLVLVNHALSPGQERNLEKYLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 112 AQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG---LR 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R AR R L +AVVGYTN
Sbjct: 155 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQHTQMRRARVRSE------LPRIAVVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL +AL+ ++ ++ +LFATLDP ++ + LP G +L+DTVGF+ +LP +LV AF
Sbjct: 209 AGKSTLFNALTGAEAYAADQLFATLDPTVRRIALPGG-NAMLADTVGFVRNLPHELVAAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL E EADLL+HV+D P EE V +VL VG E L ++ V+NKID D
Sbjct: 268 RSTLSEAREADLLLHVVDAADPLREERIAQVDEVLHAVGAGE--LPQLL-VFNKIDRIDG 324
Query: 428 EMGDVEYIDGDDISNFSRAE 447
+V + D + + +R E
Sbjct: 325 --AEVRHDAQDGVPDTARRE 342
>gi|429752639|ref|ZP_19285483.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 326 str.
F0382]
gi|429176070|gb|EKY17474.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 326 str.
F0382]
Length = 401
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 174/305 (57%), Gaps = 35/305 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLTAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVI-ENLPFLLSDTVGFIRKLPTQLIESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHD 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTN 325
Query: 427 EEMGD 431
EE+ +
Sbjct: 326 EEIAE 330
>gi|394988916|ref|ZP_10381751.1| GTP-binding proten HflX [Sulfuricella denitrificans skB26]
gi|393792295|dbj|GAB71390.1| GTP-binding proten HflX [Sulfuricella denitrificans skB26]
Length = 451
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 168/281 (59%), Gaps = 29/281 (10%)
Query: 147 SKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALM 206
S G++D +FV+ +S Q RNLE G V+DR +I+EIF+ HA ++ A+ Q E+A L
Sbjct: 94 SAGKIDVVFVDHEISPSQARNLEIEVGCKVMDRTMVILEIFHRHASSRAARAQVEIARLG 153
Query: 207 YKKSRL---VRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL ++ GP GR + G+GGRG AGE+ +L +R+I +
Sbjct: 154 YMAPRLREAAKLAGPQGR--------------QRSGTGGRG----AGESHTELDKRKIRD 195
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R + L +I + R QR+ R+ + +GLA VA+VGYTNAGKSTL+ AL+ S++
Sbjct: 196 RIAELQLEIAAMDVERKTQRSRRQ-----ERQGLANVALVGYTNAGKSTLMRALTGSEVL 250
Query: 324 SDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 383
+ +LFATLD ++++ S +VL+SDTVGFI +LP LV +F +TLEE ++A LL+HV
Sbjct: 251 VENKLFATLDTTVRALQPESRPRVLVSDTVGFIKNLPHGLVASFKSTLEEALDASLLLHV 310
Query: 384 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
+D + P E +VL ++G K I V+NKID+
Sbjct: 311 IDASDPGFERQLEVTDKVLAEIGA---KDVPRIRVFNKIDH 348
>gi|219130091|ref|XP_002185207.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403386|gb|EEC43339.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 415
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 193/367 (52%), Gaps = 66/367 (17%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGK----------- 174
T+ G G V+ E E D I +A LS QQ++LE A+ K
Sbjct: 36 TYIGSGKVK------EAEEKMKEYDCCTIVFDAELSPGQQKSLENAFNKESLQNDFLFQG 89
Query: 175 ---PVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI++IF HA T+E KLQ +LA Y+K RL R+ T E
Sbjct: 90 GEIKVIDRTALILDIFAQHAKTREGKLQVDLALHEYRKPRLTRM------WTHLE----- 138
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R G+GG G + G GE++L++ +R + +R L +I++V++ RA+ R R R
Sbjct: 139 ----RQSGAGGVG-LRGPGESQLEIDKRLVRDRIITLKQKIDDVQKQRAMHRRGRER--- 190
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGR---KVL 348
GL +++VGYTNAGKS++++ L+ + + +++ LFATLDP + V LP + +VL
Sbjct: 191 ---TGLPILSLVGYTNAGKSSMLNYLTKAGVMAESMLFATLDPTTRKVKLPGYKTHPEVL 247
Query: 349 LSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS 408
L+DTVGFI LP LV AF ATLEEV EAD+L+HV+D + P + +V VL + S
Sbjct: 248 LTDTVGFIQKLPTHLVAAFRATLEEVQEADVLIHVIDVSNPTWRKQEQSVRSVLADIEAS 307
Query: 409 EEKLKNMIEVWNKIDYHDEEMGD--------------VEYIDGDDISNFSRAEDKDTTS- 453
+ K M+ V NKID D D V ++GD + +F + +S
Sbjct: 308 D---KPMVRVLNKIDLLDPVEADELRCQAALEDFTVAVSALEGDGMQDFVSVVEDAMSSL 364
Query: 454 -EPVDVE 459
P++VE
Sbjct: 365 LVPIEVE 371
>gi|118364850|ref|XP_001015646.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89297413|gb|EAR95401.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
Length = 677
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 185/337 (54%), Gaps = 35/337 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSG---------I 163
+ ++ +K K +FF G + I +I ++I N ++S I
Sbjct: 201 IAKSSLIKMKKIIGKSFFTKGKLMDIGIYIKD-------NSIDCNPMMSSDTEAEGDEPI 253
Query: 164 QQRNLERAWGKP--VLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGP--- 218
Q + + + GK V DR +I++IF A T+ A+ Q E+ L Y K++L R G
Sbjct: 254 QTSDYDNSSGKKIRVFDRFTMILQIFAKRAQTQIARHQIEVCFLNYLKTKLQREGGTTFN 313
Query: 219 ------DGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQI 272
G L + EVVSA+ R + G+ + G GET+L+LQRR + ++ S L ++
Sbjct: 314 AMYNIFKGDLMTAQEISLEVVSAKSRAAKGK--VQGEGETQLELQRRLVNDKLSKLKKEL 371
Query: 273 EEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF-SDARLFAT 331
+ + R R++ + + T+A++GYTNAGKS L++AL D+ S LF T
Sbjct: 372 ISLLENQNFLREKRKKQYNN----VPTIALIGYTNAGKSALMNALIKKDVVESKDNLFQT 427
Query: 332 LDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 391
L + L SG++ ++ DT+GFI+DLP +LVD+F +TL EV ADL++HV D + P+
Sbjct: 428 LSTTSRKFKLISGQQAIILDTIGFITDLPHELVDSFQSTLMEVEHADLVLHVRDISHPHT 487
Query: 392 EEHRTTVLQVLQQVGVSEEKLKN-MIEVWNKIDYHDE 427
E+ + TVL+VL+Q+G ++ N MIEVWNK+D +E
Sbjct: 488 EDQKKTVLKVLKQLGFDQQFYTNKMIEVWNKMDLLEE 524
>gi|126662689|ref|ZP_01733688.1| GTP-binding protein HflX [Flavobacteria bacterium BAL38]
gi|126626068|gb|EAZ96757.1| GTP-binding protein HflX [Flavobacteria bacterium BAL38]
Length = 407
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 138/395 (34%), Positives = 197/395 (49%), Gaps = 47/395 (11%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
+ N EE+ + Y D F VV+ S K K TF G G +E IK +I
Sbjct: 16 GIVTQNQSEEKLNEYLDELEFLTFTAGGTVVKRFSQKMDKPNPKTFVGTGKLEEIKYYIK 75
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
++ + + L+ Q +N+ + VLDR LI++IF A T A+ Q ELA
Sbjct: 76 D----NDIKTVIFDDELTPSQSKNITKELDCKVLDRTNLILDIFAQRAETSYARTQVELA 131
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL G T E R GG G + G GETE++ RR + +
Sbjct: 132 QCQYLLPRLT------GMWTHLE-----------RQKGGIG-MRGPGETEIETDRRIVRD 173
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R S L +I+ + + A QR+ R + VA+VGYTN GKSTL++A+ SD+F
Sbjct: 174 RISLLKEKIKVIDKQMATQRSNRG--------AMVRVALVGYTNVGKSTLMNAVGKSDVF 225
Query: 324 SDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 383
+ +LFATLD ++ V+ LLSDTVGFI LP QLV++F +TL+EV EADLL+HV
Sbjct: 226 VENKLFATLDTTVRKTVI-KNLPFLLSDTVGFIRKLPTQLVESFKSTLDEVREADLLLHV 284
Query: 384 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHDEEMGDVEYIDGDDISN 442
+D + P EEH +V ++L + ++ K I V+NKID YH Y D +D+S
Sbjct: 285 VDISHPEFEEHIASVNKILLDIKSAD---KPTIMVFNKIDAYHP------VYFDENDLS- 334
Query: 443 FSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVS 477
+ TT E + + +NN F+S
Sbjct: 335 -----IEKTTKHYTLEEWQNTWMSKLGENNTLFIS 364
>gi|433675994|ref|ZP_20508158.1| tRNA modification GTPase mnmE [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430818882|emb|CCP38417.1| tRNA modification GTPase mnmE [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 441
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 179/325 (55%), Gaps = 33/325 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D I VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEASGA-DLILVNHALSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RL+R G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLIR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R AR R L +AV
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQKRLEKVEVQHTQMRRARVRSE------LPRIAV 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL +AL+ ++ ++ +LFATLDP ++ + LP G +L+DTVGF+ +LP +
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYAADQLFATLDPTVRRIALPGG-NAMLADTVGFVRNLPHE 262
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E EAD L+HV+D P EE V +VL VG + L ++ V+NKI
Sbjct: 263 LVAAFRSTLSEAREADFLLHVVDAADPLREERIAQVDEVLHAVGAGD--LPQLL-VFNKI 319
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAE 447
D E DV + D + + +R E
Sbjct: 320 DRI--EGADVRHDAQDGVPDEARRE 342
>gi|407455093|ref|YP_006733984.1| GTP-binding proten HflX [Chlamydia psittaci GR9]
gi|407457827|ref|YP_006736132.1| GTP-binding proten HflX [Chlamydia psittaci WS/RT/E30]
gi|405781636|gb|AFS20385.1| GTP-binding proten HflX [Chlamydia psittaci GR9]
gi|405785403|gb|AFS24149.1| GTP-binding proten HflX [Chlamydia psittaci WS/RT/E30]
Length = 462
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 161/273 (58%), Gaps = 22/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLPSG++VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T ++L+++GV K +I V NKID
Sbjct: 321 AFEHIETTKEILKELGVDHPK---IITVLNKID 350
>gi|338814528|ref|ZP_08626542.1| GTP-binding protein [Acetonema longum DSM 6540]
gi|337273464|gb|EGO62087.1| GTP-binding protein [Acetonema longum DSM 6540]
Length = 619
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 175/301 (58%), Gaps = 31/301 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K A F G G V+ I+ I E+ D + ++ L+ QQRNLE+ V+DR L
Sbjct: 237 KPDAAFFLGKGKVDEIQHLIQETEA----DVLVLDDELTPAQQRNLEQYLKIKVIDRTAL 292
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L Y RL +G+ V+S G G G
Sbjct: 293 ILDIFAQRARSYEGKLQVELAQLRYNLPRL--------------SGQGLVLSRLGGGIGT 338
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G GET+L++ +RRI R + +IE V+ RA+QR R++ + +V +
Sbjct: 339 ----RGPGETKLEMDKRRIRSRIHDVEKEIETVKANRALQRIRRKKSS------IPSVVL 388
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
+GYTNAGKSTL+++LS++ + ++ +LFATLDP ++V L +G+++LL+DTVGFI LP
Sbjct: 389 IGYTNAGKSTLLNSLSEAGVLAEDKLFATLDPTTRNVKLSNGQEILLTDTVGFIQKLPHH 448
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEEV +ADLL+HVLD + P V VL+++ E K++I V NK+
Sbjct: 449 LVAAFRATLEEVKQADLLLHVLDISHPRFRAQSDAVFHVLREL---ESDSKDIITVCNKV 505
Query: 423 D 423
D
Sbjct: 506 D 506
>gi|116334341|ref|YP_795868.1| GTPase [Lactobacillus brevis ATCC 367]
gi|116099688|gb|ABJ64837.1| GTPase [Lactobacillus brevis ATCC 367]
Length = 425
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 169/304 (55%), Gaps = 34/304 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + + + +D + VN L+ Q RNLE+ ++DR GLI+EIF
Sbjct: 54 TYFGTGKVEELATIV----ADDGVDTVVVNDELTPSQIRNLEKVTKARIIDRTGLILEIF 109
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A ++EAKLQ +LA L Y+ RL T ++ + + GG GF +
Sbjct: 110 ANRAQSREAKLQVQLAKLQYQLPRL-------------HTSASQRLDQQTGSGGGGGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G+GE++ ++ RR + +H+ +++E+ + A QR R R+ L +VA+VGYT
Sbjct: 157 RGSGESQTEISRRTLQRAITHVNHELKEINQAAATQRQQRERNQ------LPSVALVGYT 210
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
NAGKSTL++AL + +F LFATLD ++ + P +K+LLSDTVGF+S L
Sbjct: 211 NAGKSTLMNALVREFGKSDEKQVFVKNMLFATLDTSVRQLTFPDQKKLLLSDTVGFVSQL 270
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P QLV AF +TL E ADLLV V+D PN E T Q L +GV++ M+ V+
Sbjct: 271 PTQLVKAFRSTLAEAANADLLVQVVDYADPNKEAMMATTEQTLHDIGVTDVP---MVTVF 327
Query: 420 NKID 423
NK D
Sbjct: 328 NKAD 331
>gi|399030314|ref|ZP_10730820.1| GTP-binding protein HflX [Flavobacterium sp. CF136]
gi|398071820|gb|EJL63067.1| GTP-binding protein HflX [Flavobacterium sp. CF136]
Length = 409
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 180/342 (52%), Gaps = 34/342 (9%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
+ N EE+ + Y D F V++ S K + TF G G ++ I ++
Sbjct: 16 GIVTQNQSEEKLNEYLDELEFLTFTAGGEVIKRFSQKMERPNPKTFVGTGKIDEINLYV- 74
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
+ ++ + + L+ QQ+N+ + +LDR LI++IF A T A+ Q ELA
Sbjct: 75 ---KENDISTLIFDDELTPSQQKNISKIIDCKILDRTNLILDIFAQRAETSYARTQVELA 131
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL G T E R GG G + G GETE++ RR + +
Sbjct: 132 QCQYLLPRL------SGLWTHLE-----------RQKGGIG-MRGPGETEIETDRRIVRD 173
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R S L +I+ + + VQR+ R + VA+VGYTN GKSTL++A+ SD+F
Sbjct: 174 RISLLKDKIKTIDKQMGVQRSNRG--------AMVRVALVGYTNVGKSTLMNAIGKSDVF 225
Query: 324 SDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 383
+ +LFATLD ++ VV+ LLSDTVGFI LP QLVD+F +TL+EV EADLL+H+
Sbjct: 226 VENKLFATLDTTVRKVVI-KNLPFLLSDTVGFIRKLPTQLVDSFKSTLDEVREADLLLHI 284
Query: 384 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
+D + P E+H +V Q LQ + E K +I V+NKID +
Sbjct: 285 VDISHPEFEDHIESVNQTLQDIKAHE---KPVIMVFNKIDAY 323
>gi|335423730|ref|ZP_08552750.1| GTP-binding protein HflX [Salinisphaera shabanensis E1L3A]
gi|334891193|gb|EGM29448.1| GTP-binding protein HflX [Salinisphaera shabanensis E1L3A]
Length = 447
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 171/305 (56%), Gaps = 31/305 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V+ I + E EL + N LS Q+RNLE+ VLDR GLI++IF
Sbjct: 57 FVGGGKVDEIAELV--VEHSAEL--VVFNHDLSPSQERNLEKRLNARVLDRAGLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
+ A + E KLQ ELA L + +RLVR G + + R GG G + G
Sbjct: 113 SRARSHEGKLQVELAQLQHLATRLVR-------------GWSHL----ERQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER L ++E+V R R+ARRR V++VGYTNA
Sbjct: 155 PGETQLETDRRLLNERIKMLRQRLEKVSARREQGRSARRRAR------TPIVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ D+++ +LFATLDP L+ + +P G ++++DTVGFI DLP +LV AF
Sbjct: 209 GKSTLFNRLTGEDIYAADQLFATLDPTLRRMDVPVGEPLIVADTVGFIRDLPHELVAAFK 268
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
ATLEE EAD+L+HV+D H V VL ++G E IEV+NK+D ++E
Sbjct: 269 ATLEETREADVLLHVIDAADVERRAHAREVNNVLDEIGAGEVP---QIEVFNKVDLIEDE 325
Query: 429 MGDVE 433
+E
Sbjct: 326 SARIE 330
>gi|440533331|emb|CCP58841.1| GTPase HflX [Chlamydia trachomatis Ia/SotonIa1]
gi|440534225|emb|CCP59735.1| GTPase HflX [Chlamydia trachomatis Ia/SotonIa3]
Length = 447
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 163/273 (59%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D + + +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYVENKLFA 259
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLP G++VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T +LQ++G+++ + +I V NKID
Sbjct: 320 ALEHVETTKAILQELGITQPQ---VITVLNKID 349
>gi|385241750|ref|YP_005809590.1| putative nucleotide-binding protein [Chlamydia trachomatis E/11023]
gi|385245357|ref|YP_005814180.1| putative nucleotide-binding protein [Chlamydia trachomatis E/150]
gi|386262732|ref|YP_005816011.1| putative nucleotide-binding protein [Chlamydia trachomatis Sweden2]
gi|389858947|ref|YP_006361188.1| nucleotide-binding protein [Chlamydia trachomatis E/SW3]
gi|289525420|emb|CBJ14897.1| putative nucleotide-binding protein [Chlamydia trachomatis Sweden2]
gi|296434973|gb|ADH17151.1| putative nucleotide-binding protein [Chlamydia trachomatis E/150]
gi|296438693|gb|ADH20846.1| putative nucleotide-binding protein [Chlamydia trachomatis E/11023]
gi|380250896|emb|CCE12657.1| putative nucleotide-binding protein [Chlamydia trachomatis E/SW3]
gi|440529756|emb|CCP55240.1| GTPase HflX [Chlamydia trachomatis E/SotonE4]
gi|440530655|emb|CCP56139.1| GTPase HflX [Chlamydia trachomatis E/SotonE8]
gi|440535123|emb|CCP60633.1| GTPase HflX [Chlamydia trachomatis E/Bour]
gi|440536901|emb|CCP62415.1| GTPase HflX [Chlamydia trachomatis L1/440/LN]
gi|440538681|emb|CCP64195.1| GTPase HflX [Chlamydia trachomatis L1/115]
gi|440539570|emb|CCP65084.1| GTPase HflX [Chlamydia trachomatis L1/224]
gi|440541350|emb|CCP66864.1| GTPase HflX [Chlamydia trachomatis L3/404/LN]
Length = 447
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 164/273 (60%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D +++ +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFA 259
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLP G++VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T +LQ++G+++ + +I V NK+D
Sbjct: 320 ALEHVETTKAILQELGITQPQ---VITVLNKMD 349
>gi|374813649|ref|ZP_09717386.1| GTP-binding protein HflX [Treponema primitia ZAS-1]
Length = 423
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 172/295 (58%), Gaps = 32/295 (10%)
Query: 130 FGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNA 189
FG GT + + I G ++ +D + + LS QQRN ER G +DR LII+IF
Sbjct: 62 FGLGTGKADE--IAGKAAELGVDCLVFDGELSPSQQRNWERLTGIAAVDRQELIIQIFAG 119
Query: 190 HAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGA 249
A T+EA++Q LA L Y RL + +R RG GR G+
Sbjct: 120 RARTREAEIQVALAELFYSLPRLT---------------HKYIDLSRQRG--GRYGTKGS 162
Query: 250 GETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAG 309
GET+L+ RR++ +R L ++ EVR+ RAVQR R + + +VGYTN+G
Sbjct: 163 GETKLETDRRQVEQRIYRLKEELAEVRKQRAVQRKKRDKES-------VSCTLVGYTNSG 215
Query: 310 KSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GRKVLLSDTVGFISDLPLQLVDAFH 368
KS+L++AL+ +++ ++ +LFATLD + VLP+ GR ++++DTVGFI LP LVDAF
Sbjct: 216 KSSLLNALTGAEVLAEDKLFATLDATTR--VLPAKGRNLVITDTVGFIRRLPHALVDAFR 273
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TLEE V+ADLL+HVLD + P+++ + T L VL+ +G + K M+ NKID
Sbjct: 274 STLEEAVQADLLIHVLDASDPDMDAYFETTLSVLRDLGADK---KPMLTALNKID 325
>gi|166154589|ref|YP_001654707.1| putative nucleotide-binding protein [Chlamydia trachomatis 434/Bu]
gi|166155464|ref|YP_001653719.1| putative nucleotide-binding protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335856|ref|ZP_07224100.1| putative nucleotide-binding protein [Chlamydia trachomatis L2tet1]
gi|339626051|ref|YP_004717530.1| GTP-binding protein HflX [Chlamydia trachomatis L2c]
gi|165930577|emb|CAP04074.1| putative nucleotide-binding protein [Chlamydia trachomatis 434/Bu]
gi|165931452|emb|CAP07028.1| putative nucleotide-binding protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|339461357|gb|AEJ77860.1| GTP-binding protein HflX [Chlamydia trachomatis L2c]
gi|440526184|emb|CCP51668.1| GTPase HflX [Chlamydia trachomatis L2b/8200/07]
gi|440536009|emb|CCP61522.1| GTPase HflX [Chlamydia trachomatis L2b/795]
gi|440537791|emb|CCP63305.1| GTPase HflX [Chlamydia trachomatis L1/1322/p2]
gi|440540461|emb|CCP65975.1| GTPase HflX [Chlamydia trachomatis L2/25667R]
gi|440542237|emb|CCP67751.1| GTPase HflX [Chlamydia trachomatis L2b/UCH-2]
gi|440543128|emb|CCP68642.1| GTPase HflX [Chlamydia trachomatis L2b/Canada2]
gi|440544019|emb|CCP69533.1| GTPase HflX [Chlamydia trachomatis L2b/LST]
gi|440544909|emb|CCP70423.1| GTPase HflX [Chlamydia trachomatis L2b/Ams1]
gi|440545799|emb|CCP71313.1| GTPase HflX [Chlamydia trachomatis L2b/CV204]
gi|440914061|emb|CCP90478.1| GTPase HflX [Chlamydia trachomatis L2b/Ams2]
gi|440914951|emb|CCP91368.1| GTPase HflX [Chlamydia trachomatis L2b/Ams3]
gi|440915843|emb|CCP92260.1| GTPase HflX [Chlamydia trachomatis L2b/Canada1]
gi|440916737|emb|CCP93154.1| GTPase HflX [Chlamydia trachomatis L2b/Ams4]
gi|440917627|emb|CCP94044.1| GTPase HflX [Chlamydia trachomatis L2b/Ams5]
Length = 447
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 164/273 (60%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D +++ +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFA 259
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLP G++VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T +LQ++G+++ + +I V NK+D
Sbjct: 320 ALEHVETTKAILQELGITQPQ---VITVLNKMD 349
>gi|114564471|ref|YP_751985.1| HSR1-like GTP-binding protein [Shewanella frigidimarina NCIMB 400]
gi|114335764|gb|ABI73146.1| GTP-binding protein, HSR1-related [Shewanella frigidimarina NCIMB
400]
Length = 435
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 176/306 (57%), Gaps = 32/306 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E + + E+ + + N LS Q+RNLE VLDR LI++IF
Sbjct: 57 FIGSGKAEELAAMVAATEA----NVVIFNHALSPAQERNLEVVCQCRVLDRTTLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E K+Q ELA L + +RL+R G T R GG G + G
Sbjct: 113 QRARTHEGKMQVELAQLRHMSTRLIR----------GWTHLE-------RQKGGIG-MRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R ++ ++++V + R R AR+R SD LATV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRGRIKNINRRLDKVDKQREQSRRARKR---SD---LATVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL +AL+ SD+++ +LFATLDP L+ + LP G V+L+DTVGFI LP LV AF
Sbjct: 209 GKSTLFNALTSSDVYAADQLFATLDPTLRKLSLPDG-AVILADTVGFIRHLPHDLVAAFK 267
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
ATL+E +A++L+HV+DC N+ E+ V +VL+++ E + +I V NKID ++
Sbjct: 268 ATLQETRQAEILLHVVDCADDNMTENFDQVQKVLEEIDADE--ITQLI-VCNKIDLLEDF 324
Query: 429 MGDVEY 434
++Y
Sbjct: 325 APRIDY 330
>gi|404258507|ref|ZP_10961826.1| GTP-binding protein HflX [Gordonia namibiensis NBRC 108229]
gi|403403021|dbj|GAC00236.1| GTP-binding protein HflX [Gordonia namibiensis NBRC 108229]
Length = 485
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 172/304 (56%), Gaps = 30/304 (9%)
Query: 128 TFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G E ++ + GA D + + L+ Q LE+ V+DR LI++
Sbjct: 113 TYIGSGKAEELREIVLATGA------DTVICDGELTPAQLTALEKVVKVKVIDRTALILD 166
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR-GSGGRG 244
IF HA ++E K Q LA + Y L R+RG GE+ A GR GS G
Sbjct: 167 IFAQHATSREGKAQVSLAQMEYM---LPRLRG---------WGESMSRQAGGRAGSNGGV 214
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GET+++ RRRI ER + L +I ++++ R +RAAR R + ++ V G
Sbjct: 215 GLRGPGETKIETDRRRIRERMAKLRREIRDMKKARTTKRAARNRSA------IPSITVAG 268
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKS+LV+A++ + + LFATLDP + L GR V+ +DTVGF+ LP QLV
Sbjct: 269 YTNAGKSSLVNAMTGAGVLVQDALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLV 328
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE--VWNKI 422
+AF +TLEEVV+ADLL+HV+D + P E + V QV+ ++ V+EEK + E V NKI
Sbjct: 329 EAFRSTLEEVVDADLLLHVVDGSDPFPMEQISAVRQVISEI-VAEEKAEAPPELLVINKI 387
Query: 423 DYHD 426
D D
Sbjct: 388 DAID 391
>gi|221212776|ref|ZP_03585752.1| GTP-binding protein HflX [Burkholderia multivorans CGD1]
gi|221166989|gb|EED99459.1| GTP-binding protein HflX [Burkholderia multivorans CGD1]
Length = 396
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 180/333 (54%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++D + N L+ QQRNLERA + V+DR LI++
Sbjct: 52 AAMFIGSGKADELRL----ACEAHDVDIVIFNHALAPAQQRNLERALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++++RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHSTQRRQRAR------SGTMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQIVVSDTVGFIRELPHQLV 263
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGADTIR---QVLVFNKIDA 320
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|255311185|ref|ZP_05353755.1| GTP binding protein [Chlamydia trachomatis 6276]
gi|255317486|ref|ZP_05358732.1| GTP binding protein [Chlamydia trachomatis 6276s]
gi|440525297|emb|CCP50548.1| GTPase HflX [Chlamydia trachomatis K/SotonK1]
Length = 447
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 163/273 (59%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D + + +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYVENKLFA 259
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLP G++VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T +LQ++G+++ + +I V NKID
Sbjct: 320 ALEHVETTKAILQELGITQPQ---VITVLNKID 349
>gi|320161098|ref|YP_004174322.1| GTP-binding protein [Anaerolinea thermophila UNI-1]
gi|319994951|dbj|BAJ63722.1| GTP-binding protein [Anaerolinea thermophila UNI-1]
Length = 451
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 168/313 (53%), Gaps = 23/313 (7%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K DT+ G G +E IK + ++ + + LS R LE
Sbjct: 50 VVGQTTQKLDAPHPDTYIGSGKIEEIKILVEETLAQ----VVLFDNELSPRHLRELEERL 105
Query: 173 GKPV--LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
G V LDR LI++IF HAHT+E LQ ELA Y+ RL R R G G
Sbjct: 106 GPHVRILDRTALILDIFAQHAHTREGILQVELAQYEYRLPRLTRAWTHLARQAGGGGGRT 165
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
+ G + G GET+L++ RR I +R + L +++E+VR R RA R+R
Sbjct: 166 GSMGGVG--------LRGPGETQLEVDRREIRKRIATLKAELEKVRAHRMRYRAQRQR-- 215
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
+ VA+VGYTNAGKSTL++ L++++++ +LFATLDP + V LP G L +
Sbjct: 216 ----SQIPVVALVGYTNAGKSTLLNRLANAEVYVADQLFATLDPTTRRVELPGGHLALFT 271
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGFI LP QLV AF ATLEE+ EADLL+HV+D T PN E V L+++
Sbjct: 272 DTVGFIQKLPTQLVAAFRATLEEIAEADLLLHVVDITHPNAFEQAQAVHATLKEIQADH- 330
Query: 411 KLKNMIEVWNKID 423
+I + NKID
Sbjct: 331 --IPVITLLNKID 341
>gi|421858529|ref|ZP_16290795.1| GTPase [Paenibacillus popilliae ATCC 14706]
gi|410831910|dbj|GAC41232.1| GTPase [Paenibacillus popilliae ATCC 14706]
Length = 399
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 171/320 (53%), Gaps = 42/320 (13%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV QN + K + G G ++ + +N E+ + + N LS Q RNLE+
Sbjct: 18 VVTQNLN----KVNTSHYIGTGKLQEVTIMLNQHEA----NIVIFNDELSPSQLRNLEKD 69
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI++IF A TKEA+LQ E+A L Y RLV +R
Sbjct: 70 LDCKVVDRTLLILDIFGERAKTKEAQLQVEVAELQYMLPRLVGLR--------------- 114
Query: 232 VVSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
+ GR SGG G + G GE +L+L RRRI ER + L ++E + R QR R++
Sbjct: 115 --ESLGRQSGGVGTKNKGTGEKKLELDRRRIEERITALNKELEALVAHRQTQRKRRKK-- 170
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPS 343
L V++VGYTNAGKST+++ L D +F LFATLD ++S+ L
Sbjct: 171 ----TELPVVSLVGYTNAGKSTVMNTLVEQFTDSKDKFVFEQDMLFATLDTSVRSIELED 226
Query: 344 GRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ 403
+ LL+DTVGF+S LP LV AF +TLEEV EADLLVHV+D + P E+ + L+
Sbjct: 227 NKAFLLTDTVGFVSKLPHHLVKAFRSTLEEVKEADLLVHVVDFSNPEYEQQIRITNETLK 286
Query: 404 QVGVSEEKLKNMIEVWNKID 423
+G+ E MI +NKID
Sbjct: 287 AIGIEE---IPMIYAYNKID 303
>gi|345881004|ref|ZP_08832532.1| GTP-binding protein HflX [Prevotella oulorum F0390]
gi|343920721|gb|EGV31449.1| GTP-binding protein HflX [Prevotella oulorum F0390]
Length = 415
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 183/336 (54%), Gaps = 23/336 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE- 150
E + Y D F + V V+ + K A T+ G G +E IK +I E E
Sbjct: 26 EAKTKEYLDELEFLADTAGAVTVKRFTQKVNGPSAVTYVGKGKLEEIKAYIEQCEDNEEP 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL+R + L
Sbjct: 146 RLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRITLLKQ 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
+++E+ + + QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 197 RLQEIDKQKTTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLLVHV+D + P+
Sbjct: 249 TLDTTVRKVVV-DNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 425
EE V L+++G S++ +MI ++NKID YH
Sbjct: 308 FEEQIRVVDNTLKELGCSDK--PSMI-IFNKIDNYH 340
>gi|409390137|ref|ZP_11241908.1| GTP-binding protein HflX [Gordonia rubripertincta NBRC 101908]
gi|403199964|dbj|GAB85142.1| GTP-binding protein HflX [Gordonia rubripertincta NBRC 101908]
Length = 485
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 172/304 (56%), Gaps = 30/304 (9%)
Query: 128 TFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G E ++ + GA D + + L+ Q LE+ V+DR LI++
Sbjct: 113 TYIGSGKAEELREIVLATGA------DTVICDGELTPAQLTALEKVVKVKVIDRTALILD 166
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR-GSGGRG 244
IF HA ++E K Q LA + Y L R+RG GE+ A GR GS G
Sbjct: 167 IFAQHATSREGKAQVSLAQMEYM---LPRLRG---------WGESMSRQAGGRAGSNGGV 214
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GET+++ RRRI ER + L +I ++++ R +RAAR R + ++ V G
Sbjct: 215 GLRGPGETKIETDRRRIRERMAKLRREIRDMKKARTTKRAARNRSA------IPSITVAG 268
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKS+LV+A++ + + LFATLDP + L GR V+ +DTVGF+ LP QLV
Sbjct: 269 YTNAGKSSLVNAMTGAGVLVQDALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLV 328
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE--VWNKI 422
+AF +TLEEVV+ADLL+HV+D + P E + V QV+ ++ V+EEK + E V NKI
Sbjct: 329 EAFRSTLEEVVDADLLLHVVDGSDPFPMEQISAVRQVISEI-VAEEKAEAPPELLVINKI 387
Query: 423 DYHD 426
D D
Sbjct: 388 DAID 391
>gi|334703391|ref|ZP_08519257.1| GTP-binding protein HflX [Aeromonas caviae Ae398]
Length = 428
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 170/298 (57%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E I + ++ D + N L+ Q+RNLER + V+DR GLI++
Sbjct: 54 AKFFVGSGKAEEIASQVQMLDA----DVVIFNHALTPAQERNLERLFQCRVVDRTGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER +L ++++V + R R AR R+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKAILRRLDKVAKQREQGRRARNRNE------VPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+D+ +++ +LFATLDP L+ +V+ V+L+DTVGFI LP LV
Sbjct: 206 TNAGKSTLFNQLTDASVYAADQLFATLDPTLRKLVIQDVGDVILADTVGFIRHLPHDLVA 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATL+E EADLL+HV+DC ++E+ +V +VL ++ E + + + NKID
Sbjct: 266 AFKATLQETREADLLLHVVDCADEQMQENIESVQRVLAEI---EADDRPQLMICNKID 320
>gi|400289084|ref|ZP_10791116.1| GTP - binding protein, phage lambda cII repressor [Psychrobacter
sp. PAMC 21119]
Length = 486
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 174/302 (57%), Gaps = 32/302 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G I + ++ D + N LS Q+RN+E VLDR GLI++
Sbjct: 56 AKYFVGSGKAAEIAELVREHDA----DIVLFNHSLSPSQERNIEALVQCRVLDRTGLILD 111
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 112 IFAQRARTYEGKLQVELAQLNHLSTRLVR----------GWTHLE-------RQKGGIG- 153
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + L S++E+VR+TRA RA R++ SD + T+++VGY
Sbjct: 154 LRGPGETQLETDRRLLQTRVNQLKSKLEKVRQTRAQGRARRQK---SD---VPTISLVGY 207
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L D ++++ +LFATLDP L+ + +V+L DTVGF+ LP +LV+
Sbjct: 208 TNAGKSTLFNRLVDENIYAADKLFATLDPTLRRLDWQGVGRVVLVDTVGFVRHLPHELVE 267
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
+FHATLEE +EADLL+HV+D ++ ++ E V VL ++ + ++ V+NKID
Sbjct: 268 SFHATLEETLEADLLLHVIDSSSEDMHEQIQAVKDVLAEI----DNDVPVLNVYNKIDLT 323
Query: 426 DE 427
DE
Sbjct: 324 DE 325
>gi|393781711|ref|ZP_10369905.1| GTP-binding protein HflX [Bacteroides salyersiae CL02T12C01]
gi|392676315|gb|EIY69753.1| GTP-binding protein HflX [Bacteroides salyersiae CL02T12C01]
Length = 420
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 183/335 (54%), Gaps = 21/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKKFTQKLPTANSVTYVGKGKLEEIKEYILNEEENERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ + S G G GG + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL--------WTHLERQGGGSGSGSGKGGSVGLRGPGETQLEMDRRIILNRMSLLKE 197
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 198 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTMMNLLAKSEVFAENKLFA 249
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+HV+D + P
Sbjct: 250 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPG 308
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G + K MI ++NKID +
Sbjct: 309 FEEQIEVVNKTLADIGGAG---KPMILIFNKIDAY 340
>gi|333999653|ref|YP_004532265.1| GTP-binding protein HflX [Treponema primitia ZAS-2]
gi|333739023|gb|AEF84513.1| GTP-binding protein HflX [Treponema primitia ZAS-2]
Length = 447
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 163/283 (57%), Gaps = 37/283 (13%)
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D + + LS QQRN ER G +DR LII+IF A T+EA+LQ LA L Y R
Sbjct: 82 DCLVFDGDLSPSQQRNWERLTGISAVDRQELIIQIFAGRAKTREAELQVSLAELYYTLPR 141
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L + +R RG GR G+GET+L+ RR+I +R L +
Sbjct: 142 LT---------------HKYIDLSRQRG--GRYGTKGSGETKLETDRRQIEQRIHRLKEE 184
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
+E VR+ R QR R R A+ A+VGYTN+GKS+L++AL+ +D+ ++ +LFAT
Sbjct: 185 LEGVRKNRETQRKKRDRDS-------ASCALVGYTNSGKSSLLNALTGADVLAEDKLFAT 237
Query: 332 LDPRLKSVVLPS-GRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
LD + VLPS GR +++SDTVGFI LP L++AF +TLEE +ADLL+HVLD + P+
Sbjct: 238 LDATTR--VLPSKGRTLVISDTVGFIRRLPHALINAFRSTLEETAQADLLIHVLDASDPD 295
Query: 391 LEEHRTTVLQVLQQVGV----------SEEKLKNMIEVWNKID 423
++++ T L VL+++G S K M+ V NKID
Sbjct: 296 IDQYFETTLSVLRELGAVSSVEAAGRPSPPDKKPMLTVLNKID 338
>gi|312976818|ref|ZP_07788567.1| GTP-binding protein HflX [Lactobacillus crispatus CTV-05]
gi|423319439|ref|ZP_17297315.1| GTP-binding protein HflX [Lactobacillus crispatus FB049-03]
gi|423320982|ref|ZP_17298854.1| GTP-binding protein HflX [Lactobacillus crispatus FB077-07]
gi|310896146|gb|EFQ45211.1| GTP-binding protein HflX [Lactobacillus crispatus CTV-05]
gi|405588443|gb|EKB62109.1| GTP-binding protein HflX [Lactobacillus crispatus FB049-03]
gi|405598041|gb|EKB71281.1| GTP-binding protein HflX [Lactobacillus crispatus FB077-07]
Length = 421
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 195/372 (52%), Gaps = 42/372 (11%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKA-RADTFFGPGTVE 136
Q K +A +L +Q Y+ T+ + ++ V S ++ ++ A T+FG G +
Sbjct: 5 QPKKTKAYIAGVNLNDQNFDYYMTELANLTEANNMEVVGQSFQNAESIVAGTYFGVGKIN 64
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
I+ G ++K + +N L+ +Q RNLE+ V+DR LI+EIF + A TK+A
Sbjct: 65 EIRTMAQGLKAK----VLVLNDKLTPVQIRNLEKLTKMRVIDRTELILEIFASRARTKQA 120
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ +LA L Y+ RL E + RG G RG AGE++L+L
Sbjct: 121 KLQVQLARLQYELPRL-------------HPSENNLDQQRGGGFANRG----AGESKLEL 163
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I ++ S + +++ V + +AARR + VA+VGYTNAGKST ++
Sbjct: 164 NRRTIGKQISAIKKELKAVAGQEEI-KAARRNQSR-----IPKVALVGYTNAGKSTTMNG 217
Query: 317 L--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
L +D ++F LFATLD ++ + L +LSDTVGFIS LP LV++F
Sbjct: 218 LLREFSKEGADKEVFVKNMLFATLDTSVRRINLKDNFSFILSDTVGFISKLPHNLVESFK 277
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
ATL+E +ADLL++V+D + PN+ + T VL ++GV E MI +NK D D
Sbjct: 278 ATLQETRDADLLINVVDASDPNMVQMIRTTQNVLDEIGVKEIP---MITAYNKADKTDRN 334
Query: 429 MGDVEYIDGDDI 440
+E GDDI
Sbjct: 335 YPQIE---GDDI 343
>gi|357042108|ref|ZP_09103814.1| GTP-binding protein HflX [Prevotella histicola F0411]
gi|355369567|gb|EHG16958.1| GTP-binding protein HflX [Prevotella histicola F0411]
Length = 420
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 174/302 (57%), Gaps = 23/302 (7%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGE-LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
A T+ G G +E I+ +I E + + + + LS Q RN+E+ G +LDR LI+
Sbjct: 60 AVTYVGKGKLEEIREYIKLKEDADDPIGMVIFDDELSAKQMRNIEQELGVKILDRTSLIL 119
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
+IF A T AK Q ELA Y RL R+ E + + G G
Sbjct: 120 DIFAMRAQTANAKTQVELAQYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSV 170
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GET+L++ RR IL+R S L ++ E+ + +A QR R R L VA+VG
Sbjct: 171 GLRGPGETQLEMDRRIILQRMSLLKQRLTEIDKQKATQRKNRGR--------LIRVALVG 222
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTN GKST+++ L+ S++F++ +LFATLD ++ VV+ LL+DTVGFI LP LV
Sbjct: 223 YTNVGKSTIMNLLAKSEVFAENKLFATLDTTVRKVVV-ENLPFLLADTVGFIRKLPTDLV 281
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID- 423
++F +TL+EV EADLLVHV+D + P+ EE V Q L ++G +++ +MI ++NKID
Sbjct: 282 ESFKSTLDEVREADLLVHVVDISHPDFEEQIQVVNQTLAELGCADK--PSMI-IFNKIDN 338
Query: 424 YH 425
YH
Sbjct: 339 YH 340
>gi|344202793|ref|YP_004787936.1| GTP-binding proten HflX [Muricauda ruestringensis DSM 13258]
gi|343954715|gb|AEM70514.1| GTP-binding proten HflX [Muricauda ruestringensis DSM 13258]
Length = 403
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/313 (39%), Positives = 174/313 (55%), Gaps = 39/313 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E ++ + + E+ ++ + LS QQ N+E+ VLDR LI++IF
Sbjct: 60 TYIGSGKMEEVRQFV----KENEIGSVIFDDELSPAQQNNVEKLLRCKVLDRTSLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAKTSYARTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ ++ R QR R GS L VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLAKIDRQMETQRGNR----GS----LVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S SD+F++ +LFATLD ++ VVL LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNVISKSDVFAENKLFATLDTTVRKVVL-GNLPFLLSDTVGFIRKLPTQLVESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ S K I V+NKID +
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEEHIASVNQILDEIDSSG---KPCIMVFNKIDQYRP 325
Query: 428 EMGDVEYIDGDDI 440
E ID DD+
Sbjct: 326 ET-----IDEDDL 333
>gi|120437448|ref|YP_863134.1| HflX-like GTP-binding protein [Gramella forsetii KT0803]
gi|117579598|emb|CAL68067.1| HflX-like GTP-binding protein [Gramella forsetii KT0803]
Length = 407
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 190/349 (54%), Gaps = 39/349 (11%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EE+ + Y D F V++ S + K TF G G + +K ++ ++
Sbjct: 24 EEKLEEYLDELEFLTYTAGGEVIKRFSQRLDKPDPKTFIGSGKMNDVKEF----AAENDI 79
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
A+ + LS QQ+N+E+ +LDR GLI++IF A T A+ Q ELA Y R
Sbjct: 80 GAVIFDDELSPAQQKNIEKLLKCKILDRTGLILDIFAQRAKTSYARTQVELAQYEYLLPR 139
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L G T E R GG G + G GETE++ RR + ++ S L ++
Sbjct: 140 LA------GMWTHLE-----------RQRGGIG-MRGPGETEIETDRRIVRDKISLLKNK 181
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
++ + + VQR R + L VA+VGYTN GKSTL++ +S SD+F++ +LFAT
Sbjct: 182 LKVIDKQMEVQRGNRGQ--------LVRVALVGYTNVGKSTLMNVISKSDVFAENKLFAT 233
Query: 332 LDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 391
LD ++ VV+ LLSDTVGFI LP QLV++F +TL+EV EADLL+HV+D + PN
Sbjct: 234 LDTTVRKVVI-RNLPFLLSDTVGFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHPNF 292
Query: 392 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDI 440
E+H +V ++L ++ + K I V+NKID + + E ID DD+
Sbjct: 293 EDHIDSVNKILTEIETLD---KPTIMVFNKIDSY-----EAEKIDEDDL 333
>gi|385811444|ref|YP_005847840.1| GTP-binding protein HflX [Ignavibacterium album JCM 16511]
gi|383803492|gb|AFH50572.1| GTP-binding protein HflX [Ignavibacterium album JCM 16511]
Length = 420
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 162/275 (58%), Gaps = 29/275 (10%)
Query: 149 GELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYK 208
E++ + + L+ +Q RNLE+ + + V+DR GLI++IF + A TKEAK Q ELA L Y
Sbjct: 77 NEINIVIFDDDLTPVQVRNLEKLFNRKVIDRSGLILDIFASRAKTKEAKTQVELAQLQYM 136
Query: 209 KSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHL 268
RL R + + GG G G GET+++ RR I R S L
Sbjct: 137 LPRLTRAW-----------------THLSKQYGGIG-TKGPGETQIETDRRLIRTRISLL 178
Query: 269 LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARL 328
+++E++ R Q + R+ G +A+ GYTNAGKSTL + L+++++F++ +L
Sbjct: 179 KNKLEKIEAHRMTQSSGRK--------GFLRIAIAGYTNAGKSTLFNLLTEANVFAENKL 230
Query: 329 FATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTA 388
FATLD +S+ + K+L+SDTVGFI LP L+ +F +TL EV +AD+++HV+D +
Sbjct: 231 FATLDSTTRSLDIDDTHKILISDTVGFIRKLPAHLIASFKSTLNEVRDADIILHVIDISH 290
Query: 389 PNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
P E+H V + L++ G +E K +I+V+NK+D
Sbjct: 291 PYFEDHIKVVDETLKEFGSAE---KRVIKVFNKVD 322
>gi|333897278|ref|YP_004471152.1| GTP-binding protein HflX [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333112543|gb|AEF17480.1| GTP-binding proten HflX [Thermoanaerobacterium xylanolyticum LX-11]
Length = 412
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 174/311 (55%), Gaps = 34/311 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
++ G G + +K I ++ I VN L+GIQ +N+E K V+DR GLI++IF
Sbjct: 56 SYIGKGKLMELKEFIGN----NDVSMIIVNDELTGIQIKNIEDVVNKKVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E LQ ELA L Y+ RL + RL G
Sbjct: 112 AKRAKSAEGMLQVELAQLKYRLPRLQGIGNDLSRLGGGIGTRG----------------- 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR I ER + ++I+++RR R + R R+++ + VA++GYTN
Sbjct: 155 -PGETKLETDRRHIKERIRAIEAKIDDLRRHRELLRGRRKKNE------VPVVAIIGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL++ L+++ ++++ +LFATLDP + ++LPSGR+++L DTVGFI LP LV+AF
Sbjct: 208 AGKSTLMNVLTNASVYAEDKLFATLDPTARKLILPSGREIVLIDTVGFIRKLPHDLVEAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD- 426
+TLEE+ AD+L+HV+D +A ++ V VL+ + V K I V+NK D D
Sbjct: 268 KSTLEELKYADVLLHVIDISAKDVMHKINVVEGVLKDLDVIN---KPKINVYNKSDLLDK 324
Query: 427 --EEMGDVEYI 435
E GD YI
Sbjct: 325 VPENKGDSVYI 335
>gi|255348744|ref|ZP_05380751.1| putative nucleotide-binding protein [Chlamydia trachomatis 70]
gi|255503284|ref|ZP_05381674.1| putative nucleotide-binding protein [Chlamydia trachomatis 70s]
Length = 447
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 164/273 (60%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D +++ +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFA 259
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLP G++VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T +LQ++G+++ + +I V NK+D
Sbjct: 320 ALEHVETTNAILQELGITQPQ---VITVLNKMD 349
>gi|339449207|ref|ZP_08652763.1| GTP-binding proten HflX [Lactobacillus fructivorans KCTC 3543]
Length = 421
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 169/303 (55%), Gaps = 35/303 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE ++ + E+ D I N LS Q RNLE+ ++DR GLI+EIF
Sbjct: 53 TYFGKGKVEFLEQLVKTTET----DVIVANDELSPSQIRNLEKLTNAKIIDRTGLILEIF 108
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A ++EAKLQ +LA L Y+ RL T ++ + + G G
Sbjct: 109 ANRARSREAKLQVQLAKLNYQLPRL-------------RTSASQRLDQQSAGGGLAN--R 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+++L RR I + +H+ +++E+ ++ Q R+++ L T+A+VGYTN
Sbjct: 154 GAGETQIELNRRTIQHQINHVRHELKEIDKSYDTQSKKRKQND------LKTIALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST+++ L D ++ LFATLD ++ + LP+ ++ L +DTVGF+S LP
Sbjct: 208 AGKSTIMNQLVKRFGENEDKEVTVKNMLFATLDTSVRKIELPNHKRFLATDTVGFVSQLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
QL+ AF +TL E ADLL+ V+D + PN E T L+++GV + MI+V+N
Sbjct: 268 HQLIQAFKSTLAEAANADLLIQVVDYSDPNQELMMQTTEATLKEIGVPDIP---MIKVFN 324
Query: 421 KID 423
K D
Sbjct: 325 KAD 327
>gi|238917198|ref|YP_002930715.1| GTP-binding protein HflX [Eubacterium eligens ATCC 27750]
gi|238872558|gb|ACR72268.1| GTP-binding protein HflX [Eubacterium eligens ATCC 27750]
Length = 413
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 169/298 (56%), Gaps = 35/298 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G +E ++ I+ ELDA I + LS Q +NLE G V+DR +I++
Sbjct: 59 TYIGKGKIEELRLMID------ELDATGIICDDELSPAQFKNLEDELGIKVMDRTMVILD 112
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A A + E K+Q E+A L Y+ RL RL G
Sbjct: 113 IFAARATSSEGKIQVEMAQLKYRSIRLAGFGTSMSRLGGGIGTRG--------------- 157
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +++ RR I +R S L + +++++ R VQR+ R + S A+VGY
Sbjct: 158 ---PGEKKIETDRRLIRDRISKLSADLKDMKEHRDVQRSKRAKTSTS------VAAIVGY 208
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL++ L+D+ + S+ +LFATLDP +S+ LP+G KVLL+DTVGFI LP L++
Sbjct: 209 TNAGKSTLLNKLTDAGVLSEDKLFATLDPTTRSMELPNGEKVLLTDTVGFIRKLPHNLIE 268
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF +TLEE AD++VHV+D + P+ E+ +TV L+Q+GV K ++ ++NK D
Sbjct: 269 AFKSTLEEAKYADIIVHVVDVSNPDYEQQMSTVYATLKQLGVEG---KPVVTLFNKCD 323
>gi|91794552|ref|YP_564203.1| GTP-binding protein, HSR1-related [Shewanella denitrificans OS217]
gi|91716554|gb|ABE56480.1| GTP-binding protein, HSR1-related [Shewanella denitrificans OS217]
Length = 435
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 176/306 (57%), Gaps = 32/306 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E + + E+K + N LS Q+RNLER VLDR LI++IF
Sbjct: 57 FVGTGKAEELAAMVAATEAK----VVIFNHALSPAQERNLERVCHCRVLDRTTLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLRHMSTRLIR----------GWTHLE-------RQKGGIG-MRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R ++ ++++V + R R +R+R SD LATV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRGRIKNINRRLDKVDKQREQSRRSRKR---SD---LATVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ SD+++ +LFATLDP L+ + LP G V+L+DTVGFI LP LV AF
Sbjct: 209 GKSTLFNGLTSSDVYAADQLFATLDPTLRKLDLPDG-AVILADTVGFIRHLPHDLVAAFK 267
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
ATL+E +A+LL+H++DC N++++ V VL+++ E + ++ V NKID ++
Sbjct: 268 ATLQETRQAELLLHIVDCADDNMQDNFDQVQDVLKEIDADE--IPQLV-VCNKIDLLEDF 324
Query: 429 MGDVEY 434
++Y
Sbjct: 325 APRIDY 330
>gi|449105877|ref|ZP_21742569.1| GTP-binding protein HflX [Treponema denticola ASLM]
gi|451967616|ref|ZP_21920845.1| GTP-binding protein HflX [Treponema denticola US-Trep]
gi|448966445|gb|EMB47100.1| GTP-binding protein HflX [Treponema denticola ASLM]
gi|451703402|gb|EMD57768.1| GTP-binding protein HflX [Treponema denticola US-Trep]
Length = 391
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/353 (37%), Positives = 182/353 (51%), Gaps = 44/353 (12%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPP---HVVVQNPSLKSGKARADTFFGPG 133
LQ K EAL +EE+ F K L + +NP+ T G G
Sbjct: 33 LQEKNTEAL---KEIEEKELKSLVETIFLKPLSSLRFRIAKENPA---------TLVGSG 80
Query: 134 TVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHT 193
+E I I + D + N+ +S QRNLE A+ V+DR +II+IF A T
Sbjct: 81 QLEKIAQAIEEERA----DLVVFNSAVSPRIQRNLEAAFNTCVIDRSEVIIQIFADRAQT 136
Query: 194 KEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETE 253
+EA LQAELA L Y RL R R T + RG G RG GAGE +
Sbjct: 137 REAVLQAELARLEYSMPRLTR------RWT-------SLAQQRGGAKGTRGASRGAGEKK 183
Query: 254 LQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTL 313
L+L RRR+ + L ++E VR R+ QR + R G G A+VGYTNAGKS+L
Sbjct: 184 LELDRRRLKTEIAKLKKEVERVRLQRSEQR--KTRLNGDKKIG----AIVGYTNAGKSSL 237
Query: 314 VSALSDSDLFSDARLFATLDPRLKSVVLPSGRK---VLLSDTVGFISDLPLQLVDAFHAT 370
+ LS +++F++ +LFATLD + V L +G K +LL+DTVGF+S+LP QL+DAF +T
Sbjct: 238 LKKLSGAEVFTEDKLFATLDAETRKVFLQTGEKNIQILLTDTVGFVSNLPHQLIDAFRST 297
Query: 371 LEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
LEE AD L+ V D P + E +VL ++ S+ K I NK+D
Sbjct: 298 LEEAALADFLIIVCDAAHPAMPECLEVTKKVLDELSCSD---KPSIIAINKMD 347
>gi|374308648|ref|YP_005055079.1| GTP-binding protein HflX [Filifactor alocis ATCC 35896]
gi|291166975|gb|EFE29021.1| GTP-binding protein HflX [Filifactor alocis ATCC 35896]
Length = 428
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 168/307 (54%), Gaps = 39/307 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE ++ AE+ E++ I N LSG Q RNLE G V+DR LI++IF
Sbjct: 63 YIGKGKVEELR---ELAENM-EVNLIVFNNELSGSQLRNLEEGIGVTVIDRTMLILDIFA 118
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L YK RL+ + +S G G G RG
Sbjct: 119 KRARTGEGKLQVELAQLKYKLPRLI--------------NSSTNLSRTGAGIGARG---- 160
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE +L+ +RRI + + +++EV+ R VQR R + L VA+ GYTNA
Sbjct: 161 PGEKKLETDKRRIQRKIFEIERELKEVKHNREVQRKGRLKSE------LPIVALAGYTNA 214
Query: 309 GKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
GKSTL + L + ++F LFATLD L+ LP+G + LL+DTVGF+S+LP
Sbjct: 215 GKSTLFNELLKEHKEYTEEKEVFVKNMLFATLDTTLRKSQLPNGMEYLLTDTVGFVSNLP 274
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV+AFH+TLEE+ ADL++HV+D + + T VL+++GV + + + V+N
Sbjct: 275 HDLVNAFHSTLEEIKYADLILHVVDVSNEKYDLQMNTTQHVLKEIGVGDIPI---VTVFN 331
Query: 421 KIDYHDE 427
KID +E
Sbjct: 332 KIDLLEE 338
>gi|34541492|ref|NP_905971.1| GTP-binding protein HflX [Porphyromonas gingivalis W83]
gi|188995677|ref|YP_001929929.1| GTP-binding protein [Porphyromonas gingivalis ATCC 33277]
gi|419970389|ref|ZP_14485886.1| GTP-binding protein HflX [Porphyromonas gingivalis W50]
gi|34397809|gb|AAQ66870.1| GTP-binding protein HflX [Porphyromonas gingivalis W83]
gi|188595357|dbj|BAG34332.1| GTP-binding protein [Porphyromonas gingivalis ATCC 33277]
gi|392610969|gb|EIW93726.1| GTP-binding protein HflX [Porphyromonas gingivalis W50]
Length = 406
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 168/296 (56%), Gaps = 33/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ I+ ++ + E+ + + LS Q RN+E+ +LDR GLI++IF
Sbjct: 62 TFVGKGKLDEIRAYVQ----ENEIGMVVFDDELSPKQLRNIEKELQTKILDRTGLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL G T E R GG G +
Sbjct: 118 ARRAQTAHAKTQVELAQYQYMLPRLT------GLWTHLE-----------RQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+ RR +L++ + L ++ ++ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGEKQLETDRRIVLDKIARLKEELRDIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ LS S++F++ +LFATLD ++ V++ LLSDTVGFI LP QLV++F
Sbjct: 212 VGKSTLMNVLSKSEVFAENKLFATLDTTVRKVII-DNLPFLLSDTVGFIRKLPTQLVESF 270
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+EV EADLLVHV+D + P EE V Q L ++ EE K M+ ++NKID
Sbjct: 271 KSTLDEVREADLLVHVVDMSHPAFEEQIEVVNQTLAEITAGEE--KPMLLLFNKID 324
>gi|262406799|ref|ZP_06083348.1| GTP-binding protein HflX [Bacteroides sp. 2_1_22]
gi|294646410|ref|ZP_06724054.1| GTP-binding protein HflX [Bacteroides ovatus SD CC 2a]
gi|294806576|ref|ZP_06765414.1| GTP-binding protein HflX [Bacteroides xylanisolvens SD CC 1b]
gi|298484334|ref|ZP_07002496.1| GTP-binding protein HflX [Bacteroides sp. D22]
gi|336402846|ref|ZP_08583572.1| GTP-binding protein HflX [Bacteroides sp. 1_1_30]
gi|345508797|ref|ZP_08788420.1| GTP-binding protein HflX [Bacteroides sp. D1]
gi|423215611|ref|ZP_17202138.1| GTP-binding protein HflX [Bacteroides xylanisolvens CL03T12C04]
gi|229447205|gb|EEO52996.1| GTP-binding protein HflX [Bacteroides sp. D1]
gi|262355502|gb|EEZ04593.1| GTP-binding protein HflX [Bacteroides sp. 2_1_22]
gi|292638248|gb|EFF56622.1| GTP-binding protein HflX [Bacteroides ovatus SD CC 2a]
gi|294446220|gb|EFG14849.1| GTP-binding protein HflX [Bacteroides xylanisolvens SD CC 1b]
gi|295084680|emb|CBK66203.1| GTP-binding protein HflX [Bacteroides xylanisolvens XB1A]
gi|298269524|gb|EFI11123.1| GTP-binding protein HflX [Bacteroides sp. D22]
gi|335947610|gb|EGN09396.1| GTP-binding protein HflX [Bacteroides sp. 1_1_30]
gi|392691806|gb|EIY85047.1| GTP-binding protein HflX [Bacteroides xylanisolvens CL03T12C04]
Length = 419
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 182/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E I+ +I N E + E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTAHSVTYVGKGKLEEIRQYIRNEEEEERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTMMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LV++F +TL+EV EADLLVHV+D + P
Sbjct: 249 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVESFKSTLDEVREADLLVHVVDISHPG 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L ++G S K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLAEIGGSG---KPMILVFNKIDAY 339
>gi|440733051|ref|ZP_20912828.1| GTP-binding protein [Xanthomonas translucens DAR61454]
gi|440364853|gb|ELQ01974.1| GTP-binding protein [Xanthomonas translucens DAR61454]
Length = 441
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 179/325 (55%), Gaps = 33/325 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D I VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKAV---AEASGA-DLILVNHALSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RL+R G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLIR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R AR R L +AV
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQKRLEKVEVQHTQMRRARVRSE------LPRIAV 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
VGYTNAGKSTL +AL+ ++ ++ +LFATLDP ++ + LP G +L+DTVGF+ +LP +
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYAADKLFATLDPTVRRIALPGG-NAMLADTVGFVRNLPHE 262
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF +TL E EAD L+HV+D P EE V +VL VG + L ++ V+NKI
Sbjct: 263 LVAAFRSTLSEAREADFLLHVVDAADPLREERIAQVDEVLHAVGAGD--LPQLL-VFNKI 319
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAE 447
D E DV + D + + +R E
Sbjct: 320 DRI--EGADVRHDAQDGVPDEARRE 342
>gi|170694785|ref|ZP_02885936.1| GTP-binding proten HflX [Burkholderia graminis C4D1M]
gi|170140416|gb|EDT08593.1| GTP-binding proten HflX [Burkholderia graminis C4D1M]
Length = 404
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 180/335 (53%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLE+A + V+DR LI
Sbjct: 61 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLEQALNRRVIDRTSLI 114
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 115 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S++E++RR QR R R+ +V++V
Sbjct: 158 G-LRGPGETQLETDRRLIGERIKALKSRLEKLRRQHGTQRRQRSRNQT------MSVSLV 210
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +V++SDTVGFI +LP Q
Sbjct: 211 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 270
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 271 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 327
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E E ++ D+ N SR T + +D
Sbjct: 328 DAVPELAARGEAVERDEYGNISRVFLSARTGQGLD 362
>gi|373953852|ref|ZP_09613812.1| GTP-binding proten HflX [Mucilaginibacter paludis DSM 18603]
gi|373890452|gb|EHQ26349.1| GTP-binding proten HflX [Mucilaginibacter paludis DSM 18603]
Length = 394
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 181/337 (53%), Gaps = 34/337 (10%)
Query: 89 NSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESK 148
N EQ Y D F E V+ + K + TF G G +E IK +++ E
Sbjct: 24 NETAEQGKEYLDELEFLVETAGGKTVKTFTQKMLRPERSTFVGTGKLEEIKAYVDAEE-- 81
Query: 149 GELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYK 208
+D + + LS Q RN+E +LDR LI++IF A A T +A+ Q ELA L Y
Sbjct: 82 --IDIVVFDDGLSPSQLRNIENELQVKILDRNNLILDIFAARAQTSQARTQVELAQLQYL 139
Query: 209 KSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHL 268
RL R+ + R GG G + G GE++++ RR IL + S L
Sbjct: 140 LPRLTRLW-----------------THLERQKGGIG-MRGPGESQIETDRRIILNKISLL 181
Query: 269 LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARL 328
+++ + R QR R + L VA+VGYTN GKST+++ +S S++F++ +L
Sbjct: 182 KERLKLIDRQNETQRKNRGQ--------LIRVALVGYTNVGKSTIMNMISKSEVFAENKL 233
Query: 329 FATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTA 388
FATLD ++ VV+ LLSDTVGFI LP LV+ F +TL+EV EAD+L+HV+D +
Sbjct: 234 FATLDTTVRKVVI-DNLPFLLSDTVGFIRKLPHHLVECFKSTLDEVREADILLHVVDVSH 292
Query: 389 PNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
PN E+ TV + L+++G + K +I V+NKID +
Sbjct: 293 PNFEDQIKTVNETLKELGAID---KPVITVFNKIDAY 326
>gi|336172305|ref|YP_004579443.1| GTP-binding proten HflX [Lacinutrix sp. 5H-3-7-4]
gi|334726877|gb|AEH01015.1| GTP-binding proten HflX [Lacinutrix sp. 5H-3-7-4]
Length = 409
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 181/325 (55%), Gaps = 35/325 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ +I E+ AIF + LS Q+RN+ + VLDR LI++IF
Sbjct: 60 TFIGTGKMEDVRQYI---EANNISTAIFDDE-LSAAQERNISKILNCKVLDRTNLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSAARTQVELAQFEYLLPRL------KGMWTHLE-----------RQKGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++I+ + + +VQR R + + VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKAKIKTIDKQMSVQRGNRGK--------MVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S +F++ +LFATLD ++ VV+ LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNTISKSKVFAENKLFATLDTTVRKVVI-QNLPFLLSDTVGFIRKLPTQLVESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHD 426
+TL+EV EADLL+HV+D + PN E+H +V ++L ++ S K I V+NKID Y
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEDHIASVNKILGEIDSSN---KPTIMVFNKIDAYQA 325
Query: 427 EEMGDVEYIDGDDISNFSRAEDKDT 451
+ + + I ++S AE K T
Sbjct: 326 KPYDETDLIAERTEEHYSLAEWKRT 350
>gi|15600136|ref|NP_253630.1| GTP-binding protein [Pseudomonas aeruginosa PAO1]
gi|392986619|ref|YP_006485206.1| GTP-binding protein HflX [Pseudomonas aeruginosa DK2]
gi|418586315|ref|ZP_13150358.1| GTP-binding protein HflX [Pseudomonas aeruginosa MPAO1/P1]
gi|418592149|ref|ZP_13156025.1| GTP-binding protein HflX [Pseudomonas aeruginosa MPAO1/P2]
gi|419751812|ref|ZP_14278222.1| GTP-binding protein HflX [Pseudomonas aeruginosa PADK2_CF510]
gi|420142139|ref|ZP_14649766.1| GTP-binding protein [Pseudomonas aeruginosa CIG1]
gi|421156462|ref|ZP_15615908.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 14886]
gi|421163541|ref|ZP_15622248.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 25324]
gi|421183022|ref|ZP_15640489.1| GTP-binding protein [Pseudomonas aeruginosa E2]
gi|421519507|ref|ZP_15966178.1| GTP-binding protein HflX [Pseudomonas aeruginosa PAO579]
gi|9951223|gb|AAG08328.1|AE004907_6 probable GTP-binding protein [Pseudomonas aeruginosa PAO1]
gi|375043321|gb|EHS35950.1| GTP-binding protein HflX [Pseudomonas aeruginosa MPAO1/P1]
gi|375048975|gb|EHS41486.1| GTP-binding protein HflX [Pseudomonas aeruginosa MPAO1/P2]
gi|384401888|gb|EIE48241.1| GTP-binding protein HflX [Pseudomonas aeruginosa PADK2_CF510]
gi|392322124|gb|AFM67504.1| GTP-binding protein HflX [Pseudomonas aeruginosa DK2]
gi|403245107|gb|EJY58936.1| GTP-binding protein [Pseudomonas aeruginosa CIG1]
gi|404345426|gb|EJZ71778.1| GTP-binding protein HflX [Pseudomonas aeruginosa PAO579]
gi|404519006|gb|EKA29795.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 14886]
gi|404528427|gb|EKA38520.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 25324]
gi|404540938|gb|EKA50318.1| GTP-binding protein [Pseudomonas aeruginosa E2]
Length = 433
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/354 (38%), Positives = 193/354 (54%), Gaps = 38/354 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ + A G G VE + + AE+ ++ + N L+ Q+RNLERA+ VL
Sbjct: 47 SVSRHQPSAKYLIGSGKVEELHDLVK-AEN---VELVIFNHTLTPSQERNLERAFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +D +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKR---AD---I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
V++VGYTNAGKSTL ++L+ S++++ +LFATLDP L+ + L V+L+DTVGFI
Sbjct: 199 PAVSLVGYTNAGKSTLFNSLTASEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFIR 258
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV+AF ATLEE ADLL+HV+D P + VL VL ++G +E M+E
Sbjct: 259 HLPHKLVEAFRATLEESSNADLLLHVIDAYEPERDAQVEQVLAVLGEIGANE---LPMLE 315
Query: 418 VWNKIDYHDEEMGDVE-YIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDD 468
V+NK+D + VE +I DD R T E +D+ + I G+D
Sbjct: 316 VYNKVDL----LPSVEPHIQRDDSGKPVRVWLSAQTGEGLDLLRQAIAELLGED 365
>gi|449108279|ref|ZP_21744923.1| GTP-binding protein HflX [Treponema denticola ATCC 33520]
gi|449118958|ref|ZP_21755359.1| GTP-binding protein HflX [Treponema denticola H1-T]
gi|449121347|ref|ZP_21757699.1| GTP-binding protein HflX [Treponema denticola MYR-T]
gi|448951573|gb|EMB32386.1| GTP-binding protein HflX [Treponema denticola MYR-T]
gi|448951986|gb|EMB32795.1| GTP-binding protein HflX [Treponema denticola H1-T]
gi|448962129|gb|EMB42823.1| GTP-binding protein HflX [Treponema denticola ATCC 33520]
Length = 391
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 183/353 (51%), Gaps = 44/353 (12%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPP---HVVVQNPSLKSGKARADTFFGPG 133
LQ K EAL +EE+ F K L + +NP+ T G G
Sbjct: 33 LQEKSAEAL---KEIEEKELKSLVETIFLKPLSSLRFRIAKENPA---------TLVGSG 80
Query: 134 TVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHT 193
+E I I E +G D + N+ +S QRNLE A V+DR +II+IF A T
Sbjct: 81 QLEKIAQAI---EEEGA-DLVVFNSAVSPRIQRNLEAALNTCVIDRSEVIIQIFADRAQT 136
Query: 194 KEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETE 253
+EA LQAELA L Y RL R R T + RG G RG GAGE +
Sbjct: 137 REAVLQAELARLEYSMPRLTR------RWT-------SLAQQRGGAKGTRGASRGAGEKK 183
Query: 254 LQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTL 313
L+L RRR+ + L ++E VR R+ QR + R G G A+VGYTNAGKS+L
Sbjct: 184 LELDRRRLKTEITKLKKEVERVRLQRSEQR--KTRLNGDKKIG----AIVGYTNAGKSSL 237
Query: 314 VSALSDSDLFSDARLFATLDPRLKSVVLPSGRK---VLLSDTVGFISDLPLQLVDAFHAT 370
+ LS +++F++ +LFATLD + V L +G K +LL+DTVGF+S+LP QL+DAF +T
Sbjct: 238 LKKLSGAEVFTEDKLFATLDAETRKVFLQTGEKNIQILLTDTVGFVSNLPHQLIDAFRST 297
Query: 371 LEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
LEE AD L+ V D P + E +VL ++ S+ K I NK+D
Sbjct: 298 LEEAALADFLIIVCDAAHPAMPECLEVTKKVLDELSCSD---KPSIIAINKMD 347
>gi|312796099|ref|YP_004029021.1| GTP-binding protein hflX [Burkholderia rhizoxinica HKI 454]
gi|312167874|emb|CBW74877.1| GTP-binding protein hflX [Burkholderia rhizoxinica HKI 454]
Length = 415
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/332 (38%), Positives = 180/332 (54%), Gaps = 31/332 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G VE ++ GA++ ++D + N LS QQRNLE + V+DR LI++
Sbjct: 47 AAHFIGSGKVEELRL---GAQAN-DVDIVIFNHALSPAQQRNLEHELERRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RLVR T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLVRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L ++ +++R QR R R+ R L +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLRGKLRKLQRQHGTQRRQRERN-----RTL-SVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL +AL+ + ++ +LFATLD + V L V++SDTVGFI DLP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGEAGNVVVSDTVGFIRDLPHQLVA 258
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATLEE V ADLL+H++D + + V VL+++G + I V+NKID
Sbjct: 259 AFRATLEETVHADLLLHIVDAASAVRADQIEQVNDVLREIGAASIP---QILVFNKIDQV 315
Query: 426 DEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ ++ N +R T + +D
Sbjct: 316 PELASRADRVERNEYGNITRVFLSARTGQGLD 347
>gi|262379008|ref|ZP_06072165.1| GTP-binding protein HflX [Acinetobacter radioresistens SH164]
gi|262300293|gb|EEY88205.1| GTP-binding protein HflX [Acinetobacter radioresistens SH164]
Length = 446
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/299 (39%), Positives = 171/299 (57%), Gaps = 32/299 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I + E +D + + LS Q+RNLER V+DR GLI++IF
Sbjct: 58 FIGSGKAEEIAELVKTEE----IDLVIFDHSLSPAQERNLERVMQCRVIDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLEHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L+ RR + R L ++E+VR+TR RAAR++ + TV++VGYTNA
Sbjct: 156 PGESQLETDRRLLRIRMGQLKDKLEKVRQTRMQGRAARQK------AAIPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+++++++ +LFATLDP L+ + ++L+DTVGF+ +LP LV++F
Sbjct: 210 GKSTLFNILANTEVYAANQLFATLDPTLRRLEWDGIGSLVLADTVGFVRNLPHSLVESFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEE +EA LL+HV+D + P++ E V VL+++G L+ V+NKID E
Sbjct: 270 ATLEETLEATLLLHVIDSSTPDMMEQIDAVESVLKEIGADVPVLR----VYNKIDVSGE 324
>gi|421466090|ref|ZP_15914776.1| GTP-binding protein HflX [Acinetobacter radioresistens WC-A-157]
gi|421855757|ref|ZP_16288132.1| GTP-binding protein HflX [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|400203601|gb|EJO34587.1| GTP-binding protein HflX [Acinetobacter radioresistens WC-A-157]
gi|403188766|dbj|GAB74333.1| GTP-binding protein HflX [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 446
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/299 (39%), Positives = 171/299 (57%), Gaps = 32/299 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I + E +D + + LS Q+RNLER V+DR GLI++IF
Sbjct: 58 FIGSGKAEEIAELVKTEE----IDLVIFDHSLSPAQERNLERVMQCRVIDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLEHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L+ RR + R L ++E+VR+TR RAAR++ + TV++VGYTNA
Sbjct: 156 PGESQLETDRRLLRIRMGQLKDKLEKVRQTRMQGRAARQK------AAIPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+++++++ +LFATLDP L+ + ++L+DTVGF+ +LP LV++F
Sbjct: 210 GKSTLFNILANTEVYAANQLFATLDPTLRRLEWDGIGSLVLADTVGFVRNLPHSLVESFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEE +EA LL+HV+D + P++ E V VL+++G L+ V+NKID E
Sbjct: 270 ATLEETLEATLLLHVIDSSTPDMMEQIDAVESVLKEIGADVPVLR----VYNKIDVSGE 324
>gi|256844098|ref|ZP_05549585.1| GTP-binding protein HflX [Lactobacillus crispatus 125-2-CHN]
gi|293380510|ref|ZP_06626574.1| GTP-binding protein HflX [Lactobacillus crispatus 214-1]
gi|256614003|gb|EEU19205.1| GTP-binding protein HflX [Lactobacillus crispatus 125-2-CHN]
gi|290922944|gb|EFD99882.1| GTP-binding protein HflX [Lactobacillus crispatus 214-1]
Length = 421
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 195/372 (52%), Gaps = 42/372 (11%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKA-RADTFFGPGTVE 136
Q K +A +L +Q Y+ T+ + ++ V S ++ ++ A T+FG G +
Sbjct: 5 QPKKTKAYIAGVNLNDQNFDYYMTELANLTEANNMEVVGQSFQNAESIVAGTYFGVGKIN 64
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
I+ G ++K + +N L+ +Q RNLE+ V+DR LI+EIF + A TK+A
Sbjct: 65 EIRTMAQGLKAK----VLVLNDKLTPVQIRNLEKLTKMRVIDRTELILEIFASRARTKQA 120
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ +LA L Y+ RL E + RG G RG AGE++L+L
Sbjct: 121 KLQVQLARLQYELPRL-------------HPSENNLDQQRGGGFANRG----AGESKLEL 163
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I ++ S + +++ V + +AARR + VA+VGYTNAGKST ++
Sbjct: 164 NRRTIGKQISAIKKELKAVAGQEEI-KAARRNQSR-----IPKVALVGYTNAGKSTTMNG 217
Query: 317 L--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
L +D ++F LFATLD ++ + L +LSDTVGFIS LP LV++F
Sbjct: 218 LLREFSKEGADKEVFVKNMLFATLDTSVRRIDLKDNFSFILSDTVGFISKLPHNLVESFK 277
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
ATL+E +ADLL++V+D + PN+ + T VL ++GV E MI +NK D D
Sbjct: 278 ATLQETRDADLLINVVDASDPNMVQMIRTTQNVLDEIGVKEIP---MITAYNKADKTDRN 334
Query: 429 MGDVEYIDGDDI 440
+E GDDI
Sbjct: 335 YPQIE---GDDI 343
>gi|254238342|ref|ZP_04931665.1| hypothetical protein PACG_04477 [Pseudomonas aeruginosa C3719]
gi|126170273|gb|EAZ55784.1| hypothetical protein PACG_04477 [Pseudomonas aeruginosa C3719]
Length = 433
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/346 (39%), Positives = 190/346 (54%), Gaps = 38/346 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE + + AE+ ++ + N L+ Q+RNLERA+ VLDR GLI++
Sbjct: 55 AKYLIGSGKVEELHDLVK-AEN---VELVIFNHTLTPSQERNLERAFECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++E+VR R R R+R +D + V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKR---AD---IPAVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL ++L+ S++++ +LFATLDP L+ + L V+L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNSLTASEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFIRHLPHKLVE 266
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATLEE ADLL+HV+D P + VL VL ++G +E M+EV+NK+D
Sbjct: 267 AFRATLEESSNADLLLHVIDAYEPERDAQVEQVLAVLGEIGANE---LPMLEVYNKVDL- 322
Query: 426 DEEMGDVE-YIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDD 468
+ VE +I DD R T E +D+ + I G+D
Sbjct: 323 ---LPSVEPHIQRDDSGKPVRVWLSAQTGEGLDLLRQAIAELLGED 365
>gi|373851383|ref|ZP_09594183.1| GTP-binding proten HflX [Opitutaceae bacterium TAV5]
gi|372473612|gb|EHP33622.1| GTP-binding proten HflX [Opitutaceae bacterium TAV5]
Length = 435
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/340 (38%), Positives = 183/340 (53%), Gaps = 35/340 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G E + + + D I ++ LS QQRN E+ V+DR +I++IF
Sbjct: 67 TLLGSGKTEELIAR----AKELDCDLIVIDDHLSPAQQRNWEKLSEIAVIDREEVILDIF 122
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T+EA LQ LA + Y RL R A +R RG G
Sbjct: 123 ADRAQTREAVLQVALARMEYSLPRLTR---------------AWTHLSRQRGKGKM---G 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R + L ++ EVR+ R VQR R+R + T A+VGYTN
Sbjct: 165 GEGETQLEQDRRLVRDRITRLKKELGEVRKQRGVQRHKRQR------VPVPTAAIVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKS+L++ L+ S + ++ +LFATLDP + +VL +K+L++DTVGFI LP LV+AF
Sbjct: 219 AGKSSLINTLTGSSVLAEDKLFATLDPTTRQLVLRGNQKLLVTDTVGFIRRLPHGLVEAF 278
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEE + AD L+HVLD TAPN+ H T L VL ++G E K ++ V+NK+D DE
Sbjct: 279 KATLEEALVADFLIHVLDVTAPNVAAHHATTLAVLGELGADE---KRILTVFNKVDAADE 335
Query: 428 -EMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGG 466
+ +D D I F A D VD C+D G
Sbjct: 336 PHLARARQLDRDGI--FLSARTGDGVPALVD-HCLDLIAG 372
>gi|424741887|ref|ZP_18170223.1| GTP-binding protein HflX [Acinetobacter baumannii WC-141]
gi|422944484|gb|EKU39479.1| GTP-binding protein HflX [Acinetobacter baumannii WC-141]
Length = 447
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 182/318 (57%), Gaps = 35/318 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ ++ K F G G VE I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHIKVQRNKPNPKFFIGSGKVEEI------AEQVQELEASLVIFDHALSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G + +
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GWSADF 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GET+L+ RR I R + L ++E+V +TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGETQLETDRRLIRVRIAQLKDKLEKVHQTRIQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
+ TV++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ + V+L+
Sbjct: 197 ----AAIPTVSLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLEWDGIGTVVLA 252
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGF+ +L LV++F ATLEE +EA LL+HV+D + ++ + V VL+++G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSNSHDMLDQIEAVEGVLKEIGADAP 312
Query: 411 KLKNMIEVWNKIDYHDEE 428
L+ V+NKID EE
Sbjct: 313 VLR----VYNKIDLSGEE 326
>gi|344344204|ref|ZP_08775068.1| GTP-binding proten HflX [Marichromatium purpuratum 984]
gi|343804161|gb|EGV22063.1| GTP-binding proten HflX [Marichromatium purpuratum 984]
Length = 428
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 171/299 (57%), Gaps = 31/299 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E +K + + D + V+ LS Q+RNLER VLDR GLI++IF
Sbjct: 58 FLGSGKAEELKDLVAACTA----DLVIVDHPLSPAQERNLERLVQCRVLDRSGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 114 QRARSFEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + +R + L ++ ++ RA R AR + L+ V++VGYTNA
Sbjct: 156 PGETQLETDRRLLGKRVAMLERRLGKIEGQRAQGRKARAKAE------LSVVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+++ +F +LFATLDP L+ + LP+G + LL+DTVGF+SDLP +LV AF
Sbjct: 210 GKSTLFNRLTEAGVFQADQLFATLDPTLRRLELPTGERALLADTVGFVSDLPHELVAAFR 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TLEE A LL+HV+D A T V QVL+++G SE +EV+NKID +E
Sbjct: 270 STLEEARNAALLLHVIDAAATQRSRLITDVEQVLEEIGCSE---IPRLEVFNKIDRLEE 325
>gi|288802876|ref|ZP_06408313.1| GTP-binding protein HflX [Prevotella melaninogenica D18]
gi|288334693|gb|EFC73131.1| GTP-binding protein HflX [Prevotella melaninogenica D18]
Length = 416
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 185/336 (55%), Gaps = 23/336 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE- 150
E++ Y D F + + V+ + + A T+ G G +E I+ +I E + E
Sbjct: 26 EDKTKEYLDELEFLADTAGAITVKRFTQRVTGPSAVTYVGKGKLEEIRDYIKMKEDEEEP 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E+ G +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQMRNIEQELGVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL+R + L
Sbjct: 146 RLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMTLLKQ 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + + QR R R + VA+VGYTN GKST ++ L+ S++F++ +LFA
Sbjct: 197 RLAEIDKQKVTQRKNRGR--------MIRVALVGYTNVGKSTTMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+
Sbjct: 249 TLDTTVRKVVV-DNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 425
EE V Q L ++G +++ +MI ++NKID YH
Sbjct: 308 FEEQIQVVNQTLSELGCADK--PSMI-IFNKIDNYH 340
>gi|325971939|ref|YP_004248130.1| GTP-binding proten HflX [Sphaerochaeta globus str. Buddy]
gi|324027177|gb|ADY13936.1| GTP-binding proten HflX [Sphaerochaeta globus str. Buddy]
Length = 440
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 170/296 (57%), Gaps = 30/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G VE IK + + +D + + ++ QRNLE+ V+DR +I++IF
Sbjct: 77 TLIGSGKVEAIKLLV----EELSIDVVIFDQGINPRVQRNLEKEMETCVIDRDEVILQIF 132
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEA LQ ELA L Y RL R R T R GG
Sbjct: 133 ADRAATKEANLQVELARLEYSLPRLTR------RWT-----------NLNRQKGGVKGTK 175
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+L RR+I +R L +E+V + R +QR +R G+ + T A+VGYTN
Sbjct: 176 GEGETQLELDRRQIQDRVVALKLLLEKVVQQRNIQR--NQRMNGN----IPTGAIVGYTN 229
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
+GKS+L++AL+++ + + +LFATLDP + V LP G ++LLSDTVGFISDLP LVDAF
Sbjct: 230 SGKSSLLNALTNAGVLVEDKLFATLDPTTRLVKLPGGEEILLSDTVGFISDLPHNLVDAF 289
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TLEE AD L+ V D + P++ + T +QVL+++G ++ K I + NK+D
Sbjct: 290 KSTLEEAKYADFLIIVCDASHPDMLANYATTVQVLEELGCTD---KPAIVLANKMD 342
>gi|187924512|ref|YP_001896154.1| GTP-binding proten HflX [Burkholderia phytofirmans PsJN]
gi|187715706|gb|ACD16930.1| GTP-binding proten HflX [Burkholderia phytofirmans PsJN]
Length = 404
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 181/335 (54%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLE+A + V+DR LI
Sbjct: 61 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLEQALNRRVIDRTSLI 114
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 115 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L +++E++RR QR AR R+ +V++V
Sbjct: 158 G-LRGPGETQLETDRRLIGERIKALKTRLEKLRRQHGTQRRARSRNQT------MSVSLV 210
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +V++SDTVGFI +LP Q
Sbjct: 211 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 270
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 271 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 327
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E + ++ D+ N SR T + +D
Sbjct: 328 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLD 362
>gi|261379719|ref|ZP_05984292.1| GTP-binding protein HflX [Neisseria subflava NJ9703]
gi|284797392|gb|EFC52739.1| GTP-binding protein HflX [Neisseria subflava NJ9703]
Length = 386
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 170/295 (57%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE + + + ++ + N L+ Q+RNLE+ VLDRVGLI+ IF
Sbjct: 75 FVGTGKVEELAAAVK----QHDVGLVVFNHELTPTQERNLEKELQCRVLDRVGLILAIFA 130
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A ++E KLQ ELA L + RLVR G + S +G G G + G
Sbjct: 131 KRAQSQEGKLQVELAQLNHLSGRLVR-------------GYGHLQSQKG-GIG----LKG 172
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I ++ + L Q+ +VR+ RA +R +R GR L T A+VGYTNA
Sbjct: 173 PGETQLETDRRLIGQKITALKKQLADVRKQRATRRKSR-----MSGR-LKTFAIVGYTNA 226
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKS+L + L+ +D+ + +LFATLD + + L V+L+DTVGF+ DLP +LV AF
Sbjct: 227 GKSSLFNRLTKADVLAKDQLFATLDTTARRLFLSHEASVILTDTVGFVRDLPHKLVSAFS 286
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEE AD+L+HV+D + P+ E V +VL+++G E + ++ V+NKID
Sbjct: 287 ATLEETAMADVLLHVVDASNPDFERQMDDVNEVLEEIGAHE--IPQLV-VYNKID 338
>gi|163786791|ref|ZP_02181239.1| hypothetical protein FBALC1_16437 [Flavobacteriales bacterium
ALC-1]
gi|159878651|gb|EDP72707.1| hypothetical protein FBALC1_16437 [Flavobacteriales bacterium
ALC-1]
Length = 403
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/321 (37%), Positives = 177/321 (55%), Gaps = 34/321 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + K TF G G +E ++ + + E+ + + LS Q+RN+ +
Sbjct: 45 VVKRYTQKMDMPNPKTFIGTGKMEDVRRFV----EENEVGTVIFDDELSPAQERNISKIL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 NCKILDRTNLILDIFAQRAQTSYARTQVELAQCEYLLPRL------KGMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + ++ + L S+I+ + + AVQR R +
Sbjct: 149 -----RQKGGIG-MRGPGETEIETDRRIVRDKITLLKSKIKTIDKQMAVQRGNRGK---- 198
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+ VA+VGYTN GKSTL++ +S S +F++ +LFATLD ++ VV+ L+SDT
Sbjct: 199 ----MVRVALVGYTNVGKSTLMNVISKSKVFAENKLFATLDTTVRKVVI-GNLPFLVSDT 253
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI LP QLV++F +TL+EV EADLL+HV+D + N EEH +V Q+L ++ E K
Sbjct: 254 VGFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHSNFEEHIDSVNQILDEI---ESKD 310
Query: 413 KNMIEVWNKIDYHDEEMGDVE 433
K I V+NKID ++ E D E
Sbjct: 311 KPTIMVFNKIDAYEAEPFDEE 331
>gi|260893470|ref|YP_003239567.1| GTP-binding proten HflX [Ammonifex degensii KC4]
gi|260865611|gb|ACX52717.1| GTP-binding proten HflX [Ammonifex degensii KC4]
Length = 408
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 176/301 (58%), Gaps = 35/301 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGK--PVLDRVGLIIEI 186
GPG + +K + + ++ A+ N LS Q + LE +G V DR +I+EI
Sbjct: 51 LLGPGKITEVKELVE----REKIQAVVFNRELSPRQVQALEDFFGPEVAVWDRTQVILEI 106
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A ++E K+Q ELA L Y RL + G RL G
Sbjct: 107 FRRRAQSREGKIQVELARLTYLYPRLYGLGGTLSRLGGGVGTRG---------------- 150
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GET+L++ RR + R + L ++EEVR +R + R R+R G + V++VGYT
Sbjct: 151 --PGETKLEVLRRALRRRITELRRELEEVRASRDLLRRHRQRSG------IPVVSLVGYT 202
Query: 307 NAGKSTLVSALSD--SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
NAGKSTL++AL+ ++ ++ RLFATLDP + V+LPSGR LL+DTVGFI DLP +L
Sbjct: 203 NAGKSTLLNALAGEGKEVLAEDRLFATLDPVSRRVILPSGRVFLLTDTVGFIKDLPPKLK 262
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
+AF ATLEE+ ADLL+HV+D T+P L+E + V +L+++G++E K +++V+NK+D
Sbjct: 263 EAFKATLEELETADLLLHVIDLTSPYLDEQQRAVESLLEELGLAE---KPILKVYNKVDR 319
Query: 425 H 425
+
Sbjct: 320 Y 320
>gi|91784201|ref|YP_559407.1| small GTP-binding protein [Burkholderia xenovorans LB400]
gi|385209024|ref|ZP_10035892.1| GTP-binding protein HflX [Burkholderia sp. Ch1-1]
gi|91688155|gb|ABE31355.1| GTP-binding protein HflX [Burkholderia xenovorans LB400]
gi|385181362|gb|EIF30638.1| GTP-binding protein HflX [Burkholderia sp. Ch1-1]
Length = 404
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 181/335 (54%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLE+A + V+DR LI
Sbjct: 61 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLEQALNRRVIDRTSLI 114
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 115 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L +++E++RR QR AR R+ +V++V
Sbjct: 158 G-LRGPGETQLETDRRLIGERIKALKTRLEKLRRQHGTQRRARSRNQT------MSVSLV 210
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +V++SDTVGFI +LP Q
Sbjct: 211 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 270
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 271 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 327
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E + ++ D+ N SR T + +D
Sbjct: 328 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLD 362
>gi|296139514|ref|YP_003646757.1| GTP-binding proten HflX [Tsukamurella paurometabola DSM 20162]
gi|296027648|gb|ADG78418.1| GTP-binding proten HflX [Tsukamurella paurometabola DSM 20162]
Length = 479
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 159/277 (57%), Gaps = 20/277 (7%)
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D + + L+ Q LE+ V+DR LI++IF HA ++E K Q LA + Y
Sbjct: 121 DTVICDGELTPAQLNALEKVVKVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYM--- 177
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGR-GSGGRGFISGAGETELQLQRRRILERRSHLLS 270
L R+RG GEA A GR GS G + G GET+++ RRRI ER + L
Sbjct: 178 LPRLRG---------WGEALSRQAGGRAGSNGGVGLRGPGETKIETDRRRIRERMAKLRR 228
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
+I+ +++ R +R ARRR G + VA+ GYTNAGKS+L++AL+D+ + LFA
Sbjct: 229 EIKGMKQARDTKRGARRRSG------VPAVAIAGYTNAGKSSLLNALTDAGVLVQNALFA 282
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP + L GR V+ +DTVGF+ LP QLV+AF +TLEEVV+ADLLVHV+D + P
Sbjct: 283 TLDPTTRHGTLTDGRDVVFTDTVGFVRHLPTQLVEAFRSTLEEVVDADLLVHVVDGSDPM 342
Query: 391 LEEHRTTVLQVLQQV-GVSEEKLKNMIEVWNKIDYHD 426
+ V VL++V G E L + V NK D D
Sbjct: 343 PQRQIDAVRHVLREVAGEREAALPRELLVINKTDAAD 379
>gi|433655176|ref|YP_007298884.1| GTP-binding protein HflX [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293365|gb|AGB19187.1| GTP-binding protein HflX [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 412
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 174/318 (54%), Gaps = 48/318 (15%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
++ G G + +K ++ + +D + N LSG Q +N+E A + V+DR LI++IF
Sbjct: 56 SYIGKGKLIELKQFVDNMD----IDLVIANDELSGSQIKNIEEAIDRKVIDRTSLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E LQ ELA L Y+ RL + RL G
Sbjct: 112 AKRAKSAEGMLQVELAQLKYRLPRLQGLGNDLSRLGGGIGTRG----------------- 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR I ER + ++E+++R R + R RR++ + VA+VGYTN
Sbjct: 155 -PGETKLETDRRYIRERIKTIERKLEDLKRHRELLRGRRRKNK------IPVVAIVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL++AL+DS ++ + +LFATLDP + + LPSGR V+L DTVGFI LP LV+AF
Sbjct: 208 AGKSTLMNALTDSSVYVEDKLFATLDPTARKLELPSGRDVILIDTVGFIRKLPHDLVEAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM-------IEVWN 420
+TLEE+ AD+L+HV+D +A + V+ ++GV E LK++ I V+N
Sbjct: 268 KSTLEELKYADVLLHVIDISAKD----------VMHKIGVVESVLKDLDVIDKPKINVYN 317
Query: 421 KIDYHD---EEMGDVEYI 435
K D D E GD YI
Sbjct: 318 KSDLLDKIPENKGDNVYI 335
>gi|15895566|ref|NP_348915.1| GTPase, HflX [Clostridium acetobutylicum ATCC 824]
gi|337737516|ref|YP_004636963.1| GTPase, HflX [Clostridium acetobutylicum DSM 1731]
gi|384459026|ref|YP_005671446.1| GTPase, HflX [Clostridium acetobutylicum EA 2018]
gi|15025304|gb|AAK80255.1|AE007730_10 Predicted GTPase, HflX [Clostridium acetobutylicum ATCC 824]
gi|325509715|gb|ADZ21351.1| GTPase, HflX [Clostridium acetobutylicum EA 2018]
gi|336292319|gb|AEI33453.1| GTPase, HflX [Clostridium acetobutylicum DSM 1731]
Length = 593
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 170/310 (54%), Gaps = 41/310 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V+ I+ + + I + LSG Q RNLE A G V+DR LI+EIF
Sbjct: 222 FIGKGKVDEIRLLAQQCRA----NIIVFDDELSGAQVRNLEEAIGLKVIDRTTLILEIFA 277
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KEAKLQ ELA L Y+ RL+ G +V+S G G G +G
Sbjct: 278 RRAGSKEAKLQVELAQLKYRLPRLM--------------GLGKVLSRTGAGIGTKG---- 319
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE +L++ RR I ER + +++++++TR VQR R L +++VGYTNA
Sbjct: 320 PGEKKLEVDRRHINERVYEIQKELKKIKKTRQVQRERRV------SENLPCISLVGYTNA 373
Query: 309 GKSTLVSALSD----------SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
GKSTL +A+ + ++ LFATLD +++ L GRK +L+DTVGF+
Sbjct: 374 GKSTLRNAICEIAAPLDNLGKENVLEKDMLFATLDVTTRAIKLEDGRKAVLTDTVGFVRK 433
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP LV+AF +TLEEV+ +DLLVHV+D ++ + V VL+++G ++ K I V
Sbjct: 434 LPHDLVEAFKSTLEEVIYSDLLVHVVDASSDTFLQQIEAVNGVLEELGAND---KTQILV 490
Query: 419 WNKIDYHDEE 428
NKID EE
Sbjct: 491 LNKIDKISEE 500
>gi|344943929|ref|ZP_08783215.1| GTP-binding proten HflX [Methylobacter tundripaludum SV96]
gi|344259587|gb|EGW19860.1| GTP-binding proten HflX [Methylobacter tundripaludum SV96]
Length = 421
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/331 (38%), Positives = 186/331 (56%), Gaps = 36/331 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E +K I E+ D + N LS Q+RNLE G V+DR GLI++IF
Sbjct: 55 FVGKGKLEELKAIIETYEA----DIVLFNHPLSPSQERNLEGFLGVRVVDRNGLILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 111 QRAQTFEGKLQVELAQLQHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 152
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R + ++++V + R R+ R++ + +V++VGYTNA
Sbjct: 153 PGETQLETDRRLLGLRIKQIQQRLDKVDKQRHQGRSKRKKAE------VPSVSLVGYTNA 206
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ +D++ +LFATLDP L++ LP+ +++L+DTVGFI LP +LV AF
Sbjct: 207 GKSTLFNKLTGADIYVADQLFATLDPTLRNCKLPNSSEIVLADTVGFIRHLPHELVAAFK 266
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
+TL+E EADLL+HV+D ++ + E V QVL+ + +E + +EV+NKID
Sbjct: 267 STLQEASEADLLLHVIDASSDDRAETIYQVNQVLEDIKANEVR---QLEVFNKIDL---- 319
Query: 429 MGDVE-YIDGDDISNFSRAEDKDTTSEPVDV 458
+ D++ I+ DD+ N R T VD+
Sbjct: 320 LTDIQPRIERDDVGNPVRVWLSAETGAGVDL 350
>gi|402817023|ref|ZP_10866612.1| GTPase HflX [Paenibacillus alvei DSM 29]
gi|402505129|gb|EJW15655.1| GTPase HflX [Paenibacillus alvei DSM 29]
Length = 428
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 171/295 (57%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V+ ++ I+ G AIF + LSG Q RNLE A ++DR LI++IF
Sbjct: 67 FIGKGKVQELRGVID---ELGATTAIF-DQELSGAQVRNLEEALDVKIVDRTQLILDIFA 122
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E +Q ELA L Y RL +G + +S +G G G G
Sbjct: 123 QRAKTREGIIQVELAQLSYLLPRL--------------SGHGKNLSRQGGGIGT----RG 164
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L+ RR I R S L Q+ EV R+R + R R++ G VA+VGYTNA
Sbjct: 165 PGESQLETDRRHIRGRISDLKRQLHEVVRSRNLHRERRKKTGAYQ------VALVGYTNA 218
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL+ L+ +D++ + +LFATLDP + LPSG++V+L+DTVGFI +LP LV AF
Sbjct: 219 GKSTLLRQLTQADVYVENQLFATLDPTSRQWELPSGKEVVLTDTVGFIQNLPHDLVAAFR 278
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEEV EADL++HV+D ++P E+H V +LQQ+G K I ++NK D
Sbjct: 279 ATLEEVNEADLILHVMDASSPMREDHMRVVEDILQQLGAGA---KPQIVLYNKKD 330
>gi|42528250|ref|NP_973348.1| GTP-binding protein HflX, truncation, partial [Treponema denticola
ATCC 35405]
gi|422340989|ref|ZP_16421930.1| GTP-binding protein HflX [Treponema denticola F0402]
gi|449110789|ref|ZP_21747389.1| GTP-binding protein HflX [Treponema denticola ATCC 33521]
gi|449114398|ref|ZP_21750876.1| GTP-binding protein HflX [Treponema denticola ATCC 35404]
gi|81831303|sp|Q73J26.1|HFLX_TREDE RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|41819520|gb|AAS13267.1| GTP-binding protein HflX, truncation [Treponema denticola ATCC
35405]
gi|325474560|gb|EGC77746.1| GTP-binding protein HflX [Treponema denticola F0402]
gi|448956550|gb|EMB37310.1| GTP-binding protein HflX [Treponema denticola ATCC 35404]
gi|448960163|gb|EMB40880.1| GTP-binding protein HflX [Treponema denticola ATCC 33521]
Length = 391
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 165/299 (55%), Gaps = 29/299 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E I I E +G D + N+ +S QRNLE A V+DR +II+IF
Sbjct: 75 TLVGSGQLEKIAQAI---EEEGA-DLVVFNSAVSPRIQRNLEAALNTCVIDRSEVIIQIF 130
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T+EA LQAELA L Y RL R R T + RG G RG
Sbjct: 131 ADRAQTREAVLQAELARLEYSMPRLTR------RWT-------SLAQQRGGAKGTRGASR 177
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGE +L+L RRR+ + L ++E VR R+ QR + R G G A+VGYTN
Sbjct: 178 GAGEKKLELDRRRLKTEITKLKKEVERVRLQRSEQR--KTRLNGDKKIG----AIVGYTN 231
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRK---VLLSDTVGFISDLPLQLV 364
AGKS+L+ LS +++F++ +LFATLD + V L +G K +LL+DTVGF+S+LP QL+
Sbjct: 232 AGKSSLLKKLSGAEVFTEDKLFATLDAETRKVFLQTGEKNIQILLTDTVGFVSNLPHQLI 291
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
DAF +TLEE AD L+ V D P + E +VL ++ S+ K I NK+D
Sbjct: 292 DAFRSTLEEAALADFLIIVCDAAHPAMPECLEVTKKVLDELSCSD---KPSIIAINKMD 347
>gi|377573161|ref|ZP_09802235.1| GTP-binding protein HflX [Mobilicoccus pelagius NBRC 104925]
gi|377538196|dbj|GAB47400.1| GTP-binding protein HflX [Mobilicoccus pelagius NBRC 104925]
Length = 493
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 171/305 (56%), Gaps = 23/305 (7%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G E ++ I AE D + ++ L+ Q+R LE V+DR LI++IF
Sbjct: 122 TYVGSGKAEELR-DIVVAEGA---DTVVADSQLAPNQRRALEDVVKVKVIDRTALILDIF 177
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
HA +KE K Q ELA L Y L R+RG GE+ A G+ SGG G S
Sbjct: 178 AQHAKSKEGKAQVELAQLQYL---LPRLRG---------WGESMSRQAGGQVSGGAGMGS 225
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+++L RRRI +R + L +I+E++ R +R+ RR + VA+ GYT
Sbjct: 226 RGPGETKIELDRRRINQRMAKLRREIKEMKTVRDTKRSGRR------ANHVPAVAIAGYT 279
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
NAGKS+L++ ++ + + LFATLDP ++ P GR+ ++DTVGF+ LP +LV+A
Sbjct: 280 NAGKSSLLNRITGAGALVENALFATLDPTIRRAETPDGREFTIADTVGFVRSLPHELVEA 339
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 426
F +TLEEV +ADLL+HV+D + P+ E T V QVL V + V NK D D
Sbjct: 340 FRSTLEEVADADLLLHVVDGSHPDPEGQITAVRQVLADVWDDPNDQPKEVVVVNKADIAD 399
Query: 427 EEMGD 431
E+ D
Sbjct: 400 PEVVD 404
>gi|255506962|ref|ZP_05382601.1| GTP binding protein [Chlamydia trachomatis D(s)2923]
gi|385239894|ref|YP_005807736.1| GTP binding protein [Chlamydia trachomatis G/9768]
gi|385242671|ref|YP_005810510.1| GTP binding protein [Chlamydia trachomatis G/9301]
gi|385246280|ref|YP_005815102.1| GTP binding protein [Chlamydia trachomatis G/11074]
gi|389858071|ref|YP_006360313.1| nucleotide-binding protein [Chlamydia trachomatis F/SW4]
gi|389859823|ref|YP_006362063.1| nucleotide-binding protein [Chlamydia trachomatis F/SW5]
gi|296435899|gb|ADH18073.1| GTP binding protein [Chlamydia trachomatis G/9768]
gi|296437759|gb|ADH19920.1| GTP binding protein [Chlamydia trachomatis G/11074]
gi|297140259|gb|ADH97017.1| GTP binding protein [Chlamydia trachomatis G/9301]
gi|380249143|emb|CCE14435.1| putative nucleotide-binding protein [Chlamydia trachomatis F/SW5]
gi|380250018|emb|CCE13546.1| putative nucleotide-binding protein [Chlamydia trachomatis F/SW4]
gi|440527082|emb|CCP52566.1| GTPase HflX [Chlamydia trachomatis D/SotonD1]
gi|440531546|emb|CCP57056.1| GTPase HflX [Chlamydia trachomatis F/SotonF3]
Length = 447
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 163/273 (59%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D + + +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYVENKLFA 259
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLP G++VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
EH T +LQ++G+++ + +I V NK+D
Sbjct: 320 ALEHVETTKAILQELGITQPQ---VITVLNKMD 349
>gi|395802754|ref|ZP_10482006.1| GTP-binding protein HflX [Flavobacterium sp. F52]
gi|395435195|gb|EJG01137.1| GTP-binding protein HflX [Flavobacterium sp. F52]
Length = 410
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 182/342 (53%), Gaps = 34/342 (9%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
+ N EE+ + Y D F V++ S K + TF G G ++ I +
Sbjct: 16 GIVTQNQSEEKLNEYLDELEFLTFTAGGEVIKRFSQKMERPNPKTFVGTGKIDDINLFV- 74
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
+ ++ + + L+ QQ+N+ R +LDR LI++IF A T A+ Q ELA
Sbjct: 75 ---KENKISTVIFDDELTPSQQKNISRIIDCKILDRTNLILDIFAQRAETSYARTQVELA 131
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL G T E R GG G + G GETE++ RR + +
Sbjct: 132 QCQYLLPRL------SGLWTHLE-----------RQKGGIG-MRGPGETEIETDRRIVRD 173
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R S L +I+ + + ++QR+ R + VA+VGYTN GKSTL++A+ SD+F
Sbjct: 174 RISLLKDKIKTIDKQMSIQRSNRG--------AMVRVALVGYTNVGKSTLMNAIGKSDVF 225
Query: 324 SDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 383
+ +LFATLD ++ VV+ LLSDTVGFI LP QLVD+F +TL+EV EADLL+HV
Sbjct: 226 VENKLFATLDTTVRKVVI-KNLPFLLSDTVGFIRKLPTQLVDSFKSTLDEVREADLLLHV 284
Query: 384 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
+D + P+ E+H +V + LQ++ ++ K I V+NKID +
Sbjct: 285 VDISHPDFEDHIESVNKTLQEIKSND---KPTIMVFNKIDAY 323
>gi|413962512|ref|ZP_11401739.1| GTP-binding proten HflX [Burkholderia sp. SJ98]
gi|413928344|gb|EKS67632.1| GTP-binding proten HflX [Burkholderia sp. SJ98]
Length = 422
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 185/335 (55%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G VE ++ C N +++ + N L+ QQRNLE A + V+DR LI
Sbjct: 47 AKMFIGSGKVEELRLQCEAN------DVELVIFNHALAPAQQRNLEVALNRRVVDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S++E++RR QR R R+ R + +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKALKSRLEKLRRQHGTQRRQRARN-----RTM-SVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L V++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVFLGEEAGHVVVSDTVGFIRELPHQ 256
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + AD+L+HV+D ++ + V +VL+ G+ + ++ ++ V+NKI
Sbjct: 257 LVAAFRATLEETIHADVLLHVVDASSAVRLDQIDQVNEVLR--GIGADNIRQIL-VFNKI 313
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E E ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGEAVERDEYGNISRVFLSARTGQGLD 348
>gi|363582531|ref|ZP_09315341.1| GTP-binding protein HflX [Flavobacteriaceae bacterium HQM9]
Length = 409
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/329 (35%), Positives = 181/329 (55%), Gaps = 39/329 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + K + TF G G +E ++ ++ + ++ + + L+ QQ+N+E+
Sbjct: 45 VVKRFTQKMQMPNSKTFIGSGKMEEVQAYV----EQHDIGTVVFDDELTPSQQKNIEKIL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
++DR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 KAKIIDRTNLILDIFAQRAQTSYARTQVELAQYQYLLPRLA------GMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + +R S L ++++ + R A QR R +
Sbjct: 149 -----RQKGGIG-MRGPGETEIETDRRIVRDRISLLKNKLKTIDRQMATQRGNRGK---- 198
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
L VA+VGYTN GKSTL++ +S S++F++ +LFATLD ++ VV+ LLSDT
Sbjct: 199 ----LVRVALVGYTNVGKSTLMNVISKSNVFAENKLFATLDTTVRKVVI-GNLPFLLSDT 253
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI LP QLV++F +TL+EV EADLL+HV+D + P E+H +V +L ++ +
Sbjct: 254 VGFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHPQFEDHIESVNTILNEIDCKD--- 310
Query: 413 KNMIEVWNKIDYHDEEMGDVEYIDGDDIS 441
K I V+NKID + E I+ DD++
Sbjct: 311 KRTIMVFNKIDAYTHET-----IEEDDLT 334
>gi|255693723|ref|ZP_05417398.1| GTP-binding protein HflX [Bacteroides finegoldii DSM 17565]
gi|423302812|ref|ZP_17280834.1| GTP-binding protein HflX [Bacteroides finegoldii CL09T03C10]
gi|260620474|gb|EEX43345.1| GTP-binding protein HflX [Bacteroides finegoldii DSM 17565]
gi|408470688|gb|EKJ89222.1| GTP-binding protein HflX [Bacteroides finegoldii CL09T03C10]
Length = 418
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 181/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E I+ +I N E + E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIRTYIRNEEEEERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ ++ + +A QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLADIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTIMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 249 TLDTTVRKVII-ENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPG 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L ++G K MI V+NKID +
Sbjct: 308 FEEQIEVVNKTLAEIGGGG---KPMILVFNKIDAY 339
>gi|423346184|ref|ZP_17323872.1| GTP-binding protein HflX [Parabacteroides merdae CL03T12C32]
gi|409220982|gb|EKN13935.1| GTP-binding protein HflX [Parabacteroides merdae CL03T12C32]
Length = 403
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 167/296 (56%), Gaps = 34/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q RN+E+ +LDR LI++IF
Sbjct: 62 TFVGSGKLQEIKEYV----VENEIGLVIFDDELSAKQLRNIEKELQVKILDRTNLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 ARRAQTAHAKTQVELAQYKYMLPRLTRLW-----------------THLERQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ +R IL++ S L + E+ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGETQLETDKRIILDKISKLKRDLVEIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ LS S++F++ +LFATLD ++ V++ LLSDTVGFI LP +LV++F
Sbjct: 212 VGKSTLMNLLSKSEVFAENKLFATLDTTVRKVIV-DNLPFLLSDTVGFIRKLPTELVESF 270
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+EV EADLLVHV+D + P EE V + L ++ +E K MI V+NKID
Sbjct: 271 KSTLDEVREADLLVHVVDISHPTFEEQIEVVNRTLSEIDKTE---KPMIMVFNKID 323
>gi|167587057|ref|ZP_02379445.1| GTP-binding proten HflX [Burkholderia ubonensis Bu]
Length = 387
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 183/335 (54%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N ++D + N L+ QQRNLERA + V+DR LI
Sbjct: 47 AAMFVGSGKAEELRLACEAN------DVDIVIFNHALAPAQQRNLERALNRRVVDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I +R L S+++ +RR + QR R R G +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGDRIKMLKSRLDRLRRQHSTQRRQRARS------GTMSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-RKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEIGQIVVSDTVGFIRELPHQ 256
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKI 313
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E + ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|373457055|ref|ZP_09548822.1| GTP-binding proten HflX [Caldithrix abyssi DSM 13497]
gi|371718719|gb|EHO40490.1| GTP-binding proten HflX [Caldithrix abyssi DSM 13497]
Length = 424
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 167/295 (56%), Gaps = 33/295 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I ++ S ++D + + LS Q RN+E G V+DR LI++IF
Sbjct: 63 FIGKGKIEEIAEYV----SFNDIDLLIFDDELSPAQVRNIENLTGIKVIDRTALILDIFA 118
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA T AK+Q ELA L Y RL R + + +S R GG G G
Sbjct: 119 LHARTNMAKVQVELAQLNYYLPRLTR--------------QWQHLS---RQVGGIG-TKG 160
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + +R SHL ++E++ VQR R+ L A++GYTNA
Sbjct: 161 PGETQLETDRRLVRQRISHLKEKLEKIAHQNEVQRQQRQE--------LFRAALIGYTNA 212
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++AL+++ + + +LFATLD ++ + L +LLSDTVGFI LP LV +F
Sbjct: 213 GKSTLMNALTNARVLIEDQLFATLDTTVRRLALNPTTTILLSDTVGFIRKLPHHLVASFQ 272
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
TL E +EADLL+HV+D T P+ E TV Q+L ++ ++E+K + V+NK+D
Sbjct: 273 TTLAEAIEADLLIHVVDVTHPHFEAQVKTVNQILDELHLNEKK---RLLVFNKVD 324
>gi|315606386|ref|ZP_07881401.1| GTP-binding protein HflX [Prevotella buccae ATCC 33574]
gi|315251792|gb|EFU31766.1| GTP-binding protein HflX [Prevotella buccae ATCC 33574]
Length = 416
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 182/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F + V V+ + + G T+ G G +E IK +I E + E
Sbjct: 26 EAKTNEYLDELEFLADTAGAVTVKRFTQRVGGPNQTTYVGKGKLEEIKQYIQQEEDEERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQMRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL+R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQ 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ R + QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 197 RLVEIDRQKVTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+
Sbjct: 249 TLDTTVRKVVV-DNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V L ++G +++ +MI V+NKID +
Sbjct: 308 FEEQIKVVENTLGELGCADK--PSMI-VFNKIDNY 339
>gi|421478079|ref|ZP_15925850.1| GTP-binding protein HflX [Burkholderia multivorans CF2]
gi|400225325|gb|EJO55500.1| GTP-binding protein HflX [Burkholderia multivorans CF2]
Length = 396
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 183/333 (54%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++D + N L+ QQRNLERA + V+DR LI++
Sbjct: 52 AAMFIGSGKADELRL----ACEAHDVDIVIFNHALAPAQQRNLERALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++++RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHSTQRRQRAR------SGTMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 320
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|161524642|ref|YP_001579654.1| GTP-binding proten HflX [Burkholderia multivorans ATCC 17616]
gi|189350602|ref|YP_001946230.1| GTP-binding protein [Burkholderia multivorans ATCC 17616]
gi|221198074|ref|ZP_03571120.1| GTP-binding protein HflX [Burkholderia multivorans CGD2M]
gi|221204368|ref|ZP_03577385.1| GTP-binding protein HflX [Burkholderia multivorans CGD2]
gi|160342071|gb|ABX15157.1| GTP-binding proten HflX [Burkholderia multivorans ATCC 17616]
gi|189334624|dbj|BAG43694.1| GTP-binding protein [Burkholderia multivorans ATCC 17616]
gi|221175225|gb|EEE07655.1| GTP-binding protein HflX [Burkholderia multivorans CGD2]
gi|221182006|gb|EEE14407.1| GTP-binding protein HflX [Burkholderia multivorans CGD2M]
Length = 396
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 183/333 (54%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++D + N L+ QQRNLERA + V+DR LI++
Sbjct: 52 AAMFIGSGKADELRL----ACEAHDVDIVIFNHALAPAQQRNLERALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++++RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHSTQRRQRAR------SGTMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 320
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|261856598|ref|YP_003263881.1| GTP-binding proten HflX [Halothiobacillus neapolitanus c2]
gi|261837067|gb|ACX96834.1| GTP-binding proten HflX [Halothiobacillus neapolitanus c2]
Length = 440
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 175/312 (56%), Gaps = 30/312 (9%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G E + + E+ D + VNA LS Q+RNLE VLDR GLI++IF+
Sbjct: 59 YIGKGKAEELADLVKSTEA----DLVVVNAQLSPSQERNLESVLHCRVLDRTGLILDIFS 114
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + +RLVR G + RG GS G + G
Sbjct: 115 QRARSHEGKLQVELAQLKHLSTRLVR-------------GWTHLERQRG-GSIG---LRG 157
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I +R L +I +VRR R R R++ + V++VGYTNA
Sbjct: 158 PGETQLEMDRRLIHDRIKQLQDRIAKVRRQRQEGRKTRQKSQ------VPMVSLVGYTNA 211
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL +AL+++ F+ +LFATLD L+ + G ++L+DTVGFI LP +LV AF
Sbjct: 212 GKSTLFNALTEAGTFAADQLFATLDTTLRRLEFAPGEPMVLADTVGFIRHLPHELVTAFR 271
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
+TLEE +EADLL+HV+D +P + T V VL+++G + L + V NKID ++
Sbjct: 272 STLEETLEADLLIHVVDAASPERDRQMTDVEVVLKEIGA--DTLPRLT-VMNKIDQLEDR 328
Query: 429 MGDVEYIDGDDI 440
++ + +I
Sbjct: 329 APEISRNEAGEI 340
>gi|449116972|ref|ZP_21753416.1| GTP-binding protein HflX [Treponema denticola H-22]
gi|448952236|gb|EMB33040.1| GTP-binding protein HflX [Treponema denticola H-22]
Length = 391
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 165/299 (55%), Gaps = 29/299 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E I I E +G D + N+ +S QRNLE A V+DR +II+IF
Sbjct: 75 TLVGSGQLEKIAQAI---EEEGA-DLVVFNSAVSPRIQRNLEAALNTCVIDRSEVIIQIF 130
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T+EA LQAELA L Y RL R R T + RG G RG
Sbjct: 131 ADRAQTREAVLQAELARLEYSMPRLTR------RWT-------SLAQQRGGAKGTRGASR 177
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGE +L+L RRR+ + L ++E VR R+ QR + R G G A+VGYTN
Sbjct: 178 GAGEKKLELDRRRLKTEIAKLKKEVERVRLQRSEQR--KTRLNGDKKIG----AIVGYTN 231
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRK---VLLSDTVGFISDLPLQLV 364
AGKS+L+ LS +++F++ +LFATLD + V L +G K +LL+DTVGF+S+LP QL+
Sbjct: 232 AGKSSLLKKLSGAEVFTEDKLFATLDAETRKVFLQTGEKNIQILLTDTVGFVSNLPHQLI 291
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
DAF +TLEE AD L+ V D P + E +VL ++ S+ K I NK+D
Sbjct: 292 DAFRSTLEEAALADFLIIVCDAAHPAMPECLEVTKKVLDELSCSD---KPSIIAINKMD 347
>gi|441521253|ref|ZP_21002914.1| GTP-binding protein HflX [Gordonia sihwensis NBRC 108236]
gi|441459085|dbj|GAC60875.1| GTP-binding protein HflX [Gordonia sihwensis NBRC 108236]
Length = 483
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 171/309 (55%), Gaps = 24/309 (7%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
+ GK T+ G G E ++ + + + D + + L+ Q LE+ V+DR
Sbjct: 103 RRGKPDPATYLGSGKAEELREVVVASGA----DTVICDGELTPAQLTALEKVVKVKVIDR 158
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR- 238
LI++IF HA ++E K Q LA + Y L R+RG GE+ A GR
Sbjct: 159 TALILDIFAQHATSREGKAQVALAQMEYM---LPRLRG---------WGESMSRQAGGRA 206
Query: 239 GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
GS G + G GET+++ RRRI ER + L +I ++ R V+RAARRR G +
Sbjct: 207 GSNGGVGLRGPGETKIETDRRRIRERMAKLRKEIRGMKTARTVKRAARRRGG------VP 260
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
+ VVGYTNAGKS+LV+A++ S + LFATLDP + L G +V+ +DTVGF+
Sbjct: 261 ALTVVGYTNAGKSSLVNAMTGSGVLVQDALFATLDPTTRRAQLADGHEVVFTDTVGFVRH 320
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK-LKNMIE 417
LP QLV+AF +TLEE V+ADLLVHV+D + P + V QVL +V E++ +
Sbjct: 321 LPTQLVEAFRSTLEEAVDADLLVHVVDGSDPFPANQISAVRQVLGEVLAEEDRPAPPEML 380
Query: 418 VWNKIDYHD 426
V NKID D
Sbjct: 381 VVNKIDAVD 389
>gi|282877949|ref|ZP_06286758.1| GTP-binding protein HflX [Prevotella buccalis ATCC 35310]
gi|281299950|gb|EFA92310.1| GTP-binding protein HflX [Prevotella buccalis ATCC 35310]
Length = 414
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 184/342 (53%), Gaps = 22/342 (6%)
Query: 85 LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-N 143
L N EE+ + Y D F + V V+ + K G ++ G G +E IK +I N
Sbjct: 19 LITQNQNEEKTNEYLDELEFLADTAGAVTVKRFTQKLGGPNMVSYVGKGKLEEIKQYIEN 78
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
E+ + + + LS Q RN+E+ +LDR LI++IF A T AK Q ELA
Sbjct: 79 EKENDRPVGMVIFDDELSAKQIRNIEKELQVKILDRTSLILDIFAMRAQTANAKTQVELA 138
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL R+ E + + G G + G GET+L++ RR IL+
Sbjct: 139 QYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQ 189
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R + L ++ E+ + + QR R R L VA+VGYTN GKSTL++ LS S++F
Sbjct: 190 RITLLKQRLIEIDKQKTTQRKNRGR--------LIRVALVGYTNVGKSTLMNLLSKSEVF 241
Query: 324 SDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 383
++ +LFATLD ++ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+HV
Sbjct: 242 AENKLFATLDTTVRKVVI-ENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHV 300
Query: 384 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
+D + P+ EE V L+++ ++ K + V+NKID +
Sbjct: 301 VDISHPDFEEQIRVVDNTLKELDAAD---KPTMIVFNKIDQY 339
>gi|311744959|ref|ZP_07718744.1| GTP-binding protein HflX [Algoriphagus sp. PR1]
gi|126577466|gb|EAZ81686.1| GTP-binding protein HflX [Algoriphagus sp. PR1]
Length = 422
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 184/339 (54%), Gaps = 43/339 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK +I E +D + + LS Q RNLE + DR LI++IF
Sbjct: 69 TFIGSGKLDEIKAYIEHFE----VDMVIFDDDLSPSQMRNLENEMKVKIYDRSLLILDIF 124
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T +AK Q ELA Y RL R+ R RG G+ RG
Sbjct: 125 LNRAQTAQAKTQVELARFQYLLPRLTRMWTHLER-------------QRG-GTSTRG--- 167
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGE E++ +R I + + L ++ E+ + QR R+ G+ VA+VGYTN
Sbjct: 168 GAGEKEIETDKRDIRNKITLLKQKLREIEKQGVTQRKGRK--------GIVRVALVGYTN 219
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ ++ +D+ ++ +LFAT+D ++ VVL LLSDTVGFI LP L++AF
Sbjct: 220 VGKSTLMNLVTKTDILAENKLFATVDSTVRKVVLERV-PFLLSDTVGFIRKLPTHLIEAF 278
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL+E+ EADLLVHV+D + PN E+H + V Q L+++ + K ++ V+NKID ++
Sbjct: 279 KSTLDEIREADLLVHVVDISHPNFEDHISVVNQTLREINAGD---KPILLVFNKIDLVEQ 335
Query: 428 --------EMGDVEYIDGD--DISNFSRAEDKDTTSEPV 456
M ++E + + D ++ S A +K T +PV
Sbjct: 336 MPSEEAIMNMTELELEESNYLDFASLSDAYEKKTEIKPV 374
>gi|262047463|ref|ZP_06020419.1| GTP-binding protein HflX [Lactobacillus crispatus MV-3A-US]
gi|260572233|gb|EEX28797.1| GTP-binding protein HflX [Lactobacillus crispatus MV-3A-US]
Length = 421
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 195/372 (52%), Gaps = 42/372 (11%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKA-RADTFFGPGTVE 136
Q K +A +L +Q Y+ T+ + ++ V S ++ ++ A T+FG G +
Sbjct: 5 QPKKTKAYIAGVNLNDQNFDYYMTELANLTEANNMEVVGQSFQNAESIVAGTYFGVGKIN 64
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
I+ G ++K + +N L+ +Q RNLE+ V+DR LI+EIF + A TK+A
Sbjct: 65 EIRTMAQGLKAK----VLVLNDELTPVQIRNLEKLTKMRVIDRTELILEIFASRARTKQA 120
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ +LA L Y+ RL E + RG G RG AGE++L+L
Sbjct: 121 KLQVQLARLQYELPRL-------------HPSENNLDQQRGGGLANRG----AGESKLEL 163
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I ++ S + +++ V + +AARR + VA+VGYTNAGKST ++
Sbjct: 164 NRRTIGKQISAIKKELKAVAGQEEI-KAARRNQSR-----IPKVALVGYTNAGKSTTMNG 217
Query: 317 L--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
L +D ++F LFATLD ++ + L +LSDTVGFIS LP LV++F
Sbjct: 218 LLREFSKEGADKEVFVKNMLFATLDTSVRRIDLKDNFSFILSDTVGFISKLPHNLVESFK 277
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
ATL+E +ADLL++V+D + PN+ + T VL ++GV E MI +NK D D
Sbjct: 278 ATLQETRDADLLINVVDASDPNMVQMIRTTQNVLDEIGVKEIP---MITAYNKADKTDRN 334
Query: 429 MGDVEYIDGDDI 440
+E GDDI
Sbjct: 335 YPQIE---GDDI 343
>gi|114330965|ref|YP_747187.1| small GTP-binding protein [Nitrosomonas eutropha C91]
gi|114307979|gb|ABI59222.1| GTP-binding protein HflX [Nitrosomonas eutropha C91]
Length = 377
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 166/296 (56%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G VE I + ++ + N LS IQQRNL A ++DR LI++IF
Sbjct: 57 TFIGKGKVEEISQIVVQTQAA----MVIFNHELSPIQQRNLSTALACRIIDRTSLILDIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L Y +RLVR G T R GG G +
Sbjct: 113 AQRAKSHEGKLQVELAQLEYLSTRLVR----------GWTHLE-------RQKGGIG-LR 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++ ++++ R VQR AR+R + +V++VGYTN
Sbjct: 155 GPGETQLETDRRLLAKRVKFLKEKLAKLKQQRDVQRRARKRSE------IMSVSIVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKSTL + L SD ++ +LFATLD + + LP +++SDTVGFI DLP LV AF
Sbjct: 209 AGKSTLFNRLVRSDAYAADKLFATLDTTTRRLFLPERGLIVISDTVGFIRDLPHTLVAAF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEE ++ADLL+HV+D ++ N + + V ++LQ++G I + NKID
Sbjct: 269 RATLEETIQADLLLHVVDVSSSNRDVQISEVNKLLQEIGADTIP---QILILNKID 321
>gi|330831012|ref|YP_004393964.1| GTPase, HflX [Aeromonas veronii B565]
gi|423208343|ref|ZP_17194897.1| GTP-binding protein HflX [Aeromonas veronii AER397]
gi|328806148|gb|AEB51347.1| GTPase, HflX [Aeromonas veronii B565]
gi|404618188|gb|EKB15108.1| GTP-binding protein HflX [Aeromonas veronii AER397]
Length = 428
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 170/298 (57%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E I + ++ D + N L+ Q+RNLER + V+DR GLI++
Sbjct: 54 AKFFVGSGKAEEIASQVQMLDA----DVVIFNHALTPAQERNLERLFQCRVVDRTGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER +L ++++V + R R AR R+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKAILRRLDKVAKQREQGRRARNRNE------VPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ + +++ +LFATLDP L+++V+ V+L+DTVGFI LP LV
Sbjct: 206 TNAGKSTLFNQLTAASVYAADQLFATLDPTLRNLVIRDVGDVILADTVGFIRHLPHDLVA 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATL+E EADLL+HV+DC ++E+ +V QVL ++ E + + + NKID
Sbjct: 266 AFKATLQETREADLLLHVVDCADEQMQENIDSVQQVLAEI---EADDRPQLMICNKID 320
>gi|262377478|ref|ZP_06070700.1| GTP-binding protein HflX [Acinetobacter lwoffii SH145]
gi|262307534|gb|EEY88675.1| GTP-binding protein HflX [Acinetobacter lwoffii SH145]
Length = 446
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 182/326 (55%), Gaps = 41/326 (12%)
Query: 105 DKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSG 162
D E+ H+ Q K A F G G E I AE EL+A + + L+
Sbjct: 39 DTEILEHIYAQRV-----KPDAKFFIGSGKAEEI------AERVEELEANLVIFDHALTP 87
Query: 163 IQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRL 222
Q RNLE+ V+DR LI++IF A T E KLQ ELA L + SRL+R RG
Sbjct: 88 AQARNLEQVIKCRVVDRTELILDIFAQRARTYEGKLQVELAQLQHLSSRLIRSRG----- 142
Query: 223 TFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQ 282
+ S +G G G RG GET L+ RR + R L ++I++VR+TR
Sbjct: 143 --------NLDSQKG-GIGLRG----PGETLLETDRRLLRIRMGQLKARIDKVRQTRMQG 189
Query: 283 RAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP 342
R AR++ + TV++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ +
Sbjct: 190 RVARQKAA------VPTVSLVGYTNAGKSTLFNLLANSDVYAADQLFATLDPTLRRLEWD 243
Query: 343 SGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVL 402
++L+DTVGF+ +L LV++F ATLEE VEA LL+HV+D ++P + E V +VL
Sbjct: 244 GIGNLVLADTVGFVRNLSHSLVESFKATLEETVEATLLLHVIDSSSPEMLEQIEAVEKVL 303
Query: 403 QQVGVSEEKLKNMIEVWNKIDYHDEE 428
+++G +++V+NKID EE
Sbjct: 304 KEIGAD----VPILQVYNKIDCSGEE 325
>gi|421470069|ref|ZP_15918478.1| GTP-binding protein HflX [Burkholderia multivorans ATCC BAA-247]
gi|400228576|gb|EJO58501.1| GTP-binding protein HflX [Burkholderia multivorans ATCC BAA-247]
Length = 391
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 183/333 (54%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++D + N L+ QQRNLERA + V+DR LI++
Sbjct: 47 AAMFIGSGKADELRL----ACEAHDVDIVIFNHALAPAQQRNLERALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++++RR + QR R R G +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHSTQRRQRAR------SGTMSVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 258
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 259 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 315
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 316 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|383753676|ref|YP_005432579.1| putative GTP-binding protein [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365728|dbj|BAL82556.1| putative GTP-binding protein [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 599
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 177/314 (56%), Gaps = 31/314 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + K A F G G V + I E+ + ++ L+ QQ NLER
Sbjct: 222 VVATFTQRKEKPDAAFFLGKGKVNELAMEIQNLEAT----LLILDDELTPSQQHNLERML 277
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR LI++IF A+++E KLQ ELA L Y RL +G+
Sbjct: 278 GVKVIDRTALILDIFAQRANSREGKLQVELAQLRYNLPRL--------------SGQGLA 323
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+S G G G G GET+L++ RRRI + + I+ ++++R + R R+
Sbjct: 324 LSRLGGGIGT----RGPGETKLEVDRRRIYSKIHDIEELIDGMKKSRTLHRKRRKESQ-- 377
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+ VA+VGYTNAGKSTL++ L+ S++F++ +LFATLDP + + LP +++LL+DT
Sbjct: 378 ----IPLVALVGYTNAGKSTLLNKLTGSEVFAEDKLFATLDPTTRHLELPEKQEILLTDT 433
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI LP LV AF ATLEEV EADLL+HV+DC+ NLE V+ VLQ++ E
Sbjct: 434 VGFIQKLPHTLVKAFRATLEEVQEADLLLHVVDCSNENLEAQIEAVVAVLQEL---EADN 490
Query: 413 KNMIEVWNKIDYHD 426
K ++ V+NK D D
Sbjct: 491 KPVLYVFNKADQLD 504
>gi|339489619|ref|YP_004704147.1| GTP-binding proten HflX [Pseudomonas putida S16]
gi|338840462|gb|AEJ15267.1| GTP-binding proten HflX [Pseudomonas putida S16]
Length = 417
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 173/298 (58%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE + ++ + +D + N L+ Q+RNLER + VLDR GLI++
Sbjct: 39 AKYLIGSGKVEELHDLVHAEQ----VDLVIFNHTLTPSQERNLERVFECRVLDRTGLILD 94
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 95 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 136
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + S++E+VR R R R+R +D + +V++VGY
Sbjct: 137 LRGPGETQLETDRRLLRVRIRQIKSRLEKVRSQREQARRGRKR---AD---IPSVSLVGY 190
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL +AL++S++++ +LFATLDP L+ + L ++L+DTVGFI LP +LV+
Sbjct: 191 TNAGKSTLFNALTESEVYAADQLFATLDPTLRRLELTDLGPIVLADTVGFIRHLPHKLVE 250
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATLEE +DLL+HV+D P E VL VL ++G E L ++EV+NK+D
Sbjct: 251 AFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGA--EGLP-ILEVYNKLD 305
>gi|441513628|ref|ZP_20995456.1| GTP-binding protein HflX [Gordonia amicalis NBRC 100051]
gi|441451574|dbj|GAC53417.1| GTP-binding protein HflX [Gordonia amicalis NBRC 100051]
Length = 484
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 173/304 (56%), Gaps = 30/304 (9%)
Query: 128 TFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G + ++ + GA D + + L+ Q LE+ V+DR LI++
Sbjct: 112 TYIGSGKADELREIVLSTGA------DTVICDGELTPAQLTALEKVVKVKVIDRTALILD 165
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR-GSGGRG 244
IF HA ++E K Q LA + Y L R+RG GE+ A GR GS G
Sbjct: 166 IFAQHATSREGKAQVSLAQMEYM---LPRLRG---------WGESMSRQAGGRAGSNGGV 213
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GET+++ RRRI ER + L +I ++++ R +RAAR R + ++ V G
Sbjct: 214 GLRGPGETKIETDRRRIRERMAKLRREIRDMKKARTTKRAARHRSS------IPSITVAG 267
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKS+LV+A++ + + LFATLDP + L GR V+ +DTVGF+ LP QLV
Sbjct: 268 YTNAGKSSLVNAMTGAGVLVQDALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLV 327
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE--VWNKI 422
+AF +TLEEVV+ADLL+HV+D + P E + V QV+ ++ V+EEK++ E V NKI
Sbjct: 328 EAFRSTLEEVVDADLLLHVVDGSDPFPMEQISAVRQVIGEI-VAEEKVEAPPELLVINKI 386
Query: 423 DYHD 426
D D
Sbjct: 387 DAID 390
>gi|163753670|ref|ZP_02160793.1| GTP-binding protein HflX [Kordia algicida OT-1]
gi|161325884|gb|EDP97210.1| GTP-binding protein HflX [Kordia algicida OT-1]
Length = 413
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 174/313 (55%), Gaps = 39/313 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ ++ + ++ ++ + LS QQ+N+ER ++DR GLI++IF
Sbjct: 70 TFIGTGKMDEVEQFVKS----NDIGSVIFDDELSPSQQKNIERLLKCKIIDRTGLILDIF 125
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 126 AQRAKTSYARTQVELAQYQYLLPRLT------GLWTHLE-----------RQRGGIG-MR 167
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + ++ + L ++ + + AVQR R L VA+VGYTN
Sbjct: 168 GPGETEIETDRRIVRDKIALLRKKMVTIDKQMAVQRGNRG--------ALIRVALVGYTN 219
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ LLSDTVGFI LP QLVD+F
Sbjct: 220 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVI-GNLPFLLSDTVGFIRKLPTQLVDSF 278
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL+EV EADLL+HV+D + PN E+H +V Q+L ++ + K + V+NKID +
Sbjct: 279 KSTLDEVREADLLLHVVDISHPNFEDHIASVNQILSEIKSGD---KPTVMVFNKIDAYTH 335
Query: 428 EMGDVEYIDGDDI 440
E ID DD+
Sbjct: 336 ET-----IDSDDL 343
>gi|317503711|ref|ZP_07961728.1| GTP-binding protein HflX [Prevotella salivae DSM 15606]
gi|315665232|gb|EFV04882.1| GTP-binding protein HflX [Prevotella salivae DSM 15606]
Length = 415
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 185/336 (55%), Gaps = 23/336 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN-GAESKGE 150
E + Y D F + V V+ + K+ + T+ G G +E I+ +I AE++
Sbjct: 26 EAKTKEYLDELEFLADTAGAVTVKRFTQKANGPSSVTYVGKGKLEEIREYIEMCAENEDP 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELAQHRYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL+R + L
Sbjct: 146 RLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRITLLKQ 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++EE+ + + QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLEEIDKQKNTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+
Sbjct: 249 TLDTTVRKVVI-DNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 425
EE V + L +G SE+ +MI ++NKID YH
Sbjct: 308 FEEQIQVVEKTLSDLGCSEK--PSMI-IFNKIDNYH 340
>gi|158320032|ref|YP_001512539.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs]
gi|158140231|gb|ABW18543.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs]
Length = 416
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/315 (38%), Positives = 171/315 (54%), Gaps = 38/315 (12%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K + + G G +E + I +E E+ + N LSG Q RN+E V DR L
Sbjct: 46 KVNSAYYIGNGKIEELIELI--SEKNAEI--VIFNHELSGSQLRNIEEKVQCRVADRTAL 101
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A T+EAKLQ E+A L Y+ RLV G + L GR SGG
Sbjct: 102 ILDIFAQRAKTREAKLQVEVAWLQYELPRLV---GSNENL--------------GRQSGG 144
Query: 243 RGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G + GAGE +++L RR+I ER + L ++E ++ R QR R+ + VA
Sbjct: 145 VGTKNRGAGEKKIELDRRKIEERIAALNKELEILKGQRTTQRKERKE------SNIPNVA 198
Query: 302 VVGYTNAGKSTLVSALSDSD-------LFSDARLFATLDPRLKSVVLPSGRKVLLSDTVG 354
+VGYTNAGKS++++A+ D +F LFATL+ ++ + + + LLSDTVG
Sbjct: 199 LVGYTNAGKSSIMNAMMDQSQHKDNKKVFEKDMLFATLETSVRHIKVSGNKSFLLSDTVG 258
Query: 355 FISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN 414
F+SDLP LV AF +TLEEV EADLL+HV+D + P+ E + L+Q+G +
Sbjct: 259 FVSDLPHNLVKAFRSTLEEVCEADLLIHVVDISNPHYEAQIDVTKETLKQIGADHIPV-- 316
Query: 415 MIEVWNKIDYHDEEM 429
I +NKID DE +
Sbjct: 317 -IYAYNKIDLVDETL 330
>gi|313145182|ref|ZP_07807375.1| GTP-binding protein [Bacteroides fragilis 3_1_12]
gi|423280163|ref|ZP_17259076.1| GTP-binding protein HflX [Bacteroides fragilis HMW 610]
gi|424666296|ref|ZP_18103332.1| GTP-binding protein HflX [Bacteroides fragilis HMW 616]
gi|313133949|gb|EFR51309.1| GTP-binding protein [Bacteroides fragilis 3_1_12]
gi|404573835|gb|EKA78587.1| GTP-binding protein HflX [Bacteroides fragilis HMW 616]
gi|404584499|gb|EKA89164.1| GTP-binding protein HflX [Bacteroides fragilis HMW 610]
Length = 417
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 180/335 (53%), Gaps = 23/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHING-AESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I AE E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIKEYIRTEAEEDRE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELQVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ T E S +G G RG GET+L++ RR IL R S L
Sbjct: 146 RLQRL------WTHLERQGGGSGSGKGGSVGLRG----PGETQLEMDRRIILNRMSLLKE 195
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 196 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTMMNLLAKSEVFAENKLFA 247
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 248 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPG 306
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G K MI ++NKID +
Sbjct: 307 FEEQIEVVNKTLADIGGGG---KPMILIFNKIDAY 338
>gi|445119990|ref|ZP_21379231.1| GTP-binding protein HflX [Prevotella nigrescens F0103]
gi|444839374|gb|ELX66444.1| GTP-binding protein HflX [Prevotella nigrescens F0103]
Length = 420
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 190/365 (52%), Gaps = 22/365 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F V V+ + + G ++ G G + IK +I E + E + +
Sbjct: 32 YLDELEFLAHTAGAVTVKRFTQRVGGPNMTSYVGKGKLAEIKEYIKTKEDEDEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQLRNIENELQVKILDRTSLILDIFAMRAQTSNAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMTLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR RRR L VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKITQRKNRRR--------LIRVALVGYTNVGKSTIMNMLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VVL LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVL-QNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIQ 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPV 456
V + L+ + +E K I ++NKID + E + + + N S E K T +
Sbjct: 314 VVTETLKDLNCAE---KPSIIIFNKIDNYTWEEKEEDDLTPMTKKNVSLEELKRTWMAKL 370
Query: 457 DVECI 461
+ +C+
Sbjct: 371 NDDCL 375
>gi|229074802|ref|ZP_04207817.1| hypothetical protein bcere0024_16090 [Bacillus cereus Rock4-18]
gi|228708314|gb|EEL60472.1| hypothetical protein bcere0024_16090 [Bacillus cereus Rock4-18]
Length = 419
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N E+ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVEA----NMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMIDVEIPKVQ 337
>gi|269121346|ref|YP_003309523.1| GTP-binding proten HflX [Sebaldella termitidis ATCC 33386]
gi|268615224|gb|ACZ09592.1| GTP-binding proten HflX [Sebaldella termitidis ATCC 33386]
Length = 419
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 186/355 (52%), Gaps = 45/355 (12%)
Query: 100 DTDFFDKELPPHVVVQNPSLKS------GKARADTFFGPGTVETIKCHINGAESKGELDA 153
D D+ EL V N ++ K A + G G +E +K I ++ ++D
Sbjct: 17 DFDYMMDELENLVYANNINVSERLVQNLDKIHAGHYLGSGKIEELKKII----AETDVDM 72
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+ N LS Q RNLE V+DR LI++IF A TKEAKLQ E+A L Y+ R+
Sbjct: 73 VIFNDELSPYQIRNLEEFLDIEVIDRTQLILDIFYKRAKTKEAKLQVEIARLQYELPRM- 131
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
T E + + SG GAGET+L++ R I R L ++E
Sbjct: 132 ------------RTSRDEKLDQQSGASGTSN--RGAGETKLEINYRTIKHRIQLLNKELE 177
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDS-------DLFSDA 326
V + R +QR R+++ ++ V++VGYTNAGKST+++ + ++F
Sbjct: 178 NVIKERDIQRKQRKKNQ------ISVVSLVGYTNAGKSTIMNKFVNKFNKGESKEVFEKD 231
Query: 327 RLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDC 386
LFATL+ ++++ LP +K LL+DTVGF+S+LP L+ AF +TLEEV EADLL+HV+D
Sbjct: 232 MLFATLETSVRNITLPDRKKFLLTDTVGFVSNLPHHLIKAFRSTLEEVREADLLIHVVDY 291
Query: 387 TAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEM----GDVEYIDG 437
++ + + T L +VGV + + I V+NK D ++E+ GD YI
Sbjct: 292 SSIHYKNMMQTTDSTLAEVGVKDIPV---IYVYNKADLTEKEIPADDGDSIYISA 343
>gi|375136070|ref|YP_004996720.1| GTP-binding protein [Acinetobacter calcoaceticus PHEA-2]
gi|325123515|gb|ADY83038.1| GTP-binding protein [Acinetobacter calcoaceticus PHEA-2]
Length = 447
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 183/318 (57%), Gaps = 35/318 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ ++ K F G G VE I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHIKVQRNKPNPKFFIGSGKVEEI------AEQVQELEASLVIFDHALSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G + +
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GWSADF 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GET+L+ RR I R + L ++++V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGETQLETDRRLIRVRITQLKDKLDKVQQTRMQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
+ TV++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ + V+L+
Sbjct: 197 ----AAIPTVSLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTVVLA 252
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++ ++ + V VL+ +G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSHDMLDQIEAVEGVLKDIGADAP 312
Query: 411 KLKNMIEVWNKIDYHDEE 428
L+ V+NKID EE
Sbjct: 313 VLR----VYNKIDLSGEE 326
>gi|359427034|ref|ZP_09218109.1| GTP-binding protein HflX [Gordonia amarae NBRC 15530]
gi|358237647|dbj|GAB07691.1| GTP-binding protein HflX [Gordonia amarae NBRC 15530]
Length = 498
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/307 (39%), Positives = 172/307 (56%), Gaps = 30/307 (9%)
Query: 126 ADTFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A T+ G G + ++ + GA D + + L+ Q LE+ V+DR LI
Sbjct: 124 AATYIGSGKADELRQVVLSTGA------DTVICDGELTPAQLTALEKVVKVKVIDRTALI 177
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR-GSGG 242
++IF HA ++E K Q LA + Y L R+RG GE+ A GR GS G
Sbjct: 178 LDIFAQHATSREGKAQVSLAQMEYM---LPRLRG---------WGESMSRQAGGRAGSNG 225
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+++ RRRI ER + L +I E++ R +RAAR+R + + V
Sbjct: 226 GVGLRGPGETKIETDRRRIRERMAKLRREIREMKTARTTKRAARQRSS------IPKITV 279
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQ 362
GYTNAGKS+LV+A++ S + LFATLDP + L GR+V+ +DTVGF+ LP Q
Sbjct: 280 AGYTNAGKSSLVNAMTGSGVLVQDALFATLDPTTRRATLADGREVVFTDTVGFVRHLPTQ 339
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE--VWN 420
LV+AF +TLEEVV+ADLL+HV+D + P E V +V+ ++ V+EE + E V N
Sbjct: 340 LVEAFRSTLEEVVDADLLLHVVDGSDPFPTEQIAAVRRVINEI-VAEEGVAPPPELLVVN 398
Query: 421 KIDYHDE 427
KID DE
Sbjct: 399 KIDAIDE 405
>gi|167562556|ref|ZP_02355472.1| GTP-binding protein HflX [Burkholderia oklahomensis EO147]
gi|167569738|ref|ZP_02362612.1| GTP-binding protein HflX [Burkholderia oklahomensis C6786]
Length = 392
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 180/335 (53%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 52 AAMFVGSGKAEELRLACEAN------DVEIVIFNHALAPAQQRNLERMLNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L +++E++RR QR R R G +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKMLKTRLEKLRRQHHTQRRQRARSG------TMSVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 261
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ E V +VL ++G + I V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNEVLHEIGADSIR---QILVFNKI 318
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E + ++ D+ N SR T + +D
Sbjct: 319 DAVPELEARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|406673992|ref|ZP_11081208.1| GTP-binding protein HflX [Bergeyella zoohelcum CCUG 30536]
gi|405584958|gb|EKB58800.1| GTP-binding protein HflX [Bergeyella zoohelcum CCUG 30536]
Length = 403
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 176/317 (55%), Gaps = 37/317 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E I+ + + E+ + + LS Q +NLER +LDR LI++IF
Sbjct: 60 TFVGKGKMEEIRHFVK----ENEIGTVIFDDELSPSQLKNLEREMEVKILDRTNLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL R+ + R GG G +
Sbjct: 116 AQRAQTSYARTQVELAQYEYLLPRLTRMW-----------------THLERQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR I +R S L +++ + + A QR R + + VA+VGYTN
Sbjct: 158 GPGETEIETDRRIIRDRISLLKEKLKTIDKQMATQRNNRGK--------MVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ALS S++F++ +LFATLD ++ VV+ LL+DTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNALSKSEVFAENKLFATLDTTVRKVVI-GNLPFLLTDTVGFIRKLPTQLVESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID---Y 424
+TL+EV EADLL+HV+D + + E+H +V Q+LQ++ K +I ++NKID Y
Sbjct: 269 KSTLDEVREADLLIHVVDISHESFEDHIASVNQILQEIDAHR---KPIIMIFNKIDDFSY 325
Query: 425 HDEEMGDVEYIDGDDIS 441
++ D+ I +IS
Sbjct: 326 EKKDEDDLTPITKKNIS 342
>gi|15836693|ref|NP_297381.1| GTP-binding protein [Xylella fastidiosa 9a5c]
gi|9104866|gb|AAF82901.1|AE003863_3 GTP-binding protein [Xylella fastidiosa 9a5c]
Length = 450
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 170/296 (57%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I +N LS +Q+RNLE++ + V+DR GLI++IF
Sbjct: 56 TLIGSGKLKEIKA---TADATGA-DLILINHSLSPVQERNLEKSLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G RG
Sbjct: 112 AQRACSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRGGAIGLRG--- 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR + +R L ++ +V R R AR R + +A+VGYTN
Sbjct: 156 -PGETQLETDRRLLQKRVEQLQKRLSKVEVQRTQMRRARVRSE------VPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
+GKSTL +AL+ + ++ +LFATLDP+++ +VLP G +L+DTVGF+ LP +LV AF
Sbjct: 209 SGKSTLFNALTGASAYTADQLFATLDPKVRRIVLP-GSSAMLADTVGFVRHLPHELVAAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL E EADLL+HV+D P EE V +VLQ +G E L ++ V+NKID
Sbjct: 268 RSTLSEAREADLLLHVIDAADPLREERIDQVDEVLQAIGAGE--LPQLL-VFNKID 320
>gi|416938398|ref|ZP_11934272.1| GTP-binding proten HflX [Burkholderia sp. TJI49]
gi|325524781|gb|EGD02755.1| GTP-binding proten HflX [Burkholderia sp. TJI49]
Length = 396
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 182/333 (54%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++D + N L+ QQRNLERA + V+DR LI++
Sbjct: 52 AAMFIGSGKADELRL----ACEAHDVDIVIFNHALAPAQQRNLERALSRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRAR------SGTMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 320
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|390954252|ref|YP_006418010.1| GTP-binding protein HflX [Aequorivita sublithincola DSM 14238]
gi|390420238|gb|AFL80995.1| GTP-binding protein HflX [Aequorivita sublithincola DSM 14238]
Length = 404
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 173/309 (55%), Gaps = 34/309 (11%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K K TF G G ++ +K + + ++ + + LS QQ+N+++ VLDR
Sbjct: 52 KMEKPNPKTFIGTGKLQDVKNFV----EENDVGVVIFDDELSPAQQKNIQKELDCKVLDR 107
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI++IF A T A Q ELA Y RL G T E R
Sbjct: 108 TNLILDIFAQRAQTSNASTQVELAQYQYLLPRLA------GMWTHLE-----------RQ 150
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG G + G GETE++ RR + +R + L +++++ R VQR R L
Sbjct: 151 RGGIG-MRGPGETEIETDRRIVRDRIALLKDKLKKIDRQMGVQRGNRG--------ALVR 201
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
VA+VGYTN GKSTL++ +S SD+F++ +LFATLD ++ VV+ LL+DTVGFI L
Sbjct: 202 VALVGYTNVGKSTLMNVISKSDVFAENKLFATLDTTVRKVVI-GNLPFLLTDTVGFIRKL 260
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P QLV++F +TL+EV EADLL+HV+D + P+ E H +V ++L+++G ++ K I V+
Sbjct: 261 PTQLVESFKSTLDEVREADLLLHVVDISHPSFEHHIDSVDKILEEIGSAD---KPTIMVF 317
Query: 420 NKIDYHDEE 428
NKID ++ E
Sbjct: 318 NKIDAYEAE 326
>gi|389707865|ref|ZP_10186505.1| GTP-binding protein [Acinetobacter sp. HA]
gi|388610484|gb|EIM39604.1| GTP-binding protein [Acinetobacter sp. HA]
Length = 446
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 171/300 (57%), Gaps = 32/300 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I + E+ D + + L+ Q RNLER V+DR LI++IF
Sbjct: 58 FIGSGKAEEIAEKVEALEA----DLVIFDHTLTPAQARNLERVVKCRVVDRTELILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + SRL+R RG + S +G G G RG
Sbjct: 114 LRARTYEGKLQVELAQLQHLSSRLIRSRG-------------NLDSQKG-GIGLRG---- 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET L+ RR + R L +++++VR+TR R AR++ + T+++VGYTNA
Sbjct: 156 PGETLLETDRRLLRVRMGQLKARLDKVRQTRMQGRVARQK------AAVPTISLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+DSD+++ +LFATLDP L+ + V+L+DTVGF+ +L LV++F
Sbjct: 210 GKSTLFNILADSDVYAADQLFATLDPTLRRLDWEGIGTVVLADTVGFVRNLSHSLVESFK 269
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
ATLEE +EA LL+HV+D ++P + E V VL+++G + L+ V+NKID EE
Sbjct: 270 ATLEETLEATLLLHVIDSSSPEILEQIDAVESVLKEIGANVPVLR----VYNKIDQSGEE 325
>gi|117618820|ref|YP_855468.1| GTP-binding protein HflX [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560227|gb|ABK37175.1| GTP-binding protein HflX [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 428
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 169/298 (56%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E I + ++ D + N L+ Q+RNLER + V+DR GLI++
Sbjct: 54 AKFFVGSGKAEEIASQVQMLDA----DVVIFNHALTPAQERNLERLFQCRVVDRTGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER +L ++++V + R R AR R+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKAILRRLDKVAKQREQGRRARNRNE------VPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ + +++ +LFATLDP L+ +V+ V+L+DTVGFI LP LV
Sbjct: 206 TNAGKSTLFNQLTAASVYAADQLFATLDPTLRKLVIQDVGDVILADTVGFIRHLPHDLVA 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATL+E EADLL+HV+DC ++E+ +V QVL ++ E + + + NKID
Sbjct: 266 AFKATLQETREADLLLHVVDCADEQMQENIESVQQVLAEI---EADDRPQLMICNKID 320
>gi|423317192|ref|ZP_17295097.1| GTP-binding protein HflX [Bergeyella zoohelcum ATCC 43767]
gi|405581664|gb|EKB55678.1| GTP-binding protein HflX [Bergeyella zoohelcum ATCC 43767]
Length = 403
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 177/319 (55%), Gaps = 37/319 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
+ TF G G +E I+ + + E+ + + LS Q +NLER +LDR LI++
Sbjct: 58 SKTFVGKGKMEEIRDFVK----ENEIGTVIFDDELSPSQLKNLEREMEVKILDRTNLILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T A+ Q ELA Y RL R+ + R GG G
Sbjct: 114 IFAQRAQTSYARTQVELAQYEYLLPRLTRMW-----------------THLERQRGGIG- 155
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GETE++ RR I +R S L +++ + + A QR R + + VA+VGY
Sbjct: 156 MRGPGETEIETDRRIIRDRISLLKEKLKTIDKQMATQRNNRGK--------MVRVALVGY 207
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TN GKSTL++ALS S++F++ +LFATLD ++ VV+ LL+DTVGFI LP QLV+
Sbjct: 208 TNVGKSTLMNALSKSEVFAENKLFATLDTTVRKVVI-GNLPFLLTDTVGFIRKLPTQLVE 266
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-- 423
+F +TL+EV EADLL+HV+D + + E+H +V Q+LQ++ K +I ++NKID
Sbjct: 267 SFKSTLDEVREADLLIHVVDISHESFEDHIASVNQILQEIDAHR---KPIIMIFNKIDDF 323
Query: 424 -YHDEEMGDVEYIDGDDIS 441
Y ++ D+ I +IS
Sbjct: 324 SYEKKDEDDLTPITKKNIS 342
>gi|427424533|ref|ZP_18914655.1| GTP-binding protein HflX [Acinetobacter baumannii WC-136]
gi|425698640|gb|EKU68274.1| GTP-binding protein HflX [Acinetobacter baumannii WC-136]
Length = 447
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 183/318 (57%), Gaps = 35/318 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ ++ K F G G VE I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHIKVQRNKPNPKFFIGSGKVEEI------AEQVQELEASLVIFDHALSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G + +
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GWSADF 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GET+L+ RR I R + L ++++V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGETQLETDRRLIRVRITQLKDKLDKVQQTRMQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
+ TV++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ + V+L+
Sbjct: 197 ----AAIPTVSLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTVVLA 252
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++ ++ + V VL+ +G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSHDMLDQIEAVEGVLKDIGADAP 312
Query: 411 KLKNMIEVWNKIDYHDEE 428
L+ V+NKID EE
Sbjct: 313 VLR----VYNKIDLSGEE 326
>gi|402308562|ref|ZP_10827566.1| GTP-binding protein HflX [Prevotella sp. MSX73]
gi|400375013|gb|EJP27923.1| GTP-binding protein HflX [Prevotella sp. MSX73]
Length = 416
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 179/329 (54%), Gaps = 22/329 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKG-ELDAIFV 156
Y D F + V V+ + + G T+ G G +E IK +I E + E+ +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVGGPNQTTYVGKGKLEEIKQYIQQEEDEDREIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
R + QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 RQKVTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVV-DNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPDFEEQIK 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
V L ++G +++ +MI V+NKID +
Sbjct: 314 VVENTLGELGCADK--PSMI-VFNKIDNY 339
>gi|327402909|ref|YP_004343747.1| GTP-binding protein HflX [Fluviicola taffensis DSM 16823]
gi|327318417|gb|AEA42909.1| GTP-binding protein HflX [Fluviicola taffensis DSM 16823]
Length = 400
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 186/349 (53%), Gaps = 42/349 (12%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI--NGAESKG 149
+EQ Y D F E V+ + K A TF G G +E IK ++ NG E
Sbjct: 27 DEQAHEYLDELEFLAETAGATSVKRFTQKLPMANPRTFVGTGKLEEIKEYVKENGVE--- 83
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
+ + LS Q RN+ER +LDR LI++IF + A T AK Q ELA + Y
Sbjct: 84 ---LVIFDDELSPSQLRNIERELECKILDRNILILDIFASRARTSHAKTQVELAQMQYML 140
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
RL R+ + R GG G + G GE++++ RR I R + L
Sbjct: 141 PRLKRLW-----------------THLERQKGGIG-LRGPGESQIETDRRIIQTRIALLK 182
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
+++E+ + +VQR R + L VA+VGYTN GKST+++ LS S++F++ +LF
Sbjct: 183 EKLKEIDKQMSVQRGNRGQ--------LVRVALVGYTNVGKSTMMNMLSKSEVFAENKLF 234
Query: 330 ATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 389
ATLD ++ VV+ LL+DTVGFI LP QLV++F +TL+EV EADLL+HV+D + P
Sbjct: 235 ATLDTTVRKVVI-ENLPFLLTDTVGFIRKLPHQLVESFKSTLDEVREADLLIHVVDISHP 293
Query: 390 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGD 438
N E+ V + L ++ + K K MI V+NKID + G ID D
Sbjct: 294 NFEDQLNIVNETLAEL---DNKDKPMILVFNKIDAYKHNPG----IDSD 335
>gi|92113404|ref|YP_573332.1| HSR1-like GTP-binding protein [Chromohalobacter salexigens DSM
3043]
gi|91796494|gb|ABE58633.1| GTP-binding protein HflX [Chromohalobacter salexigens DSM 3043]
Length = 439
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 170/298 (57%), Gaps = 35/298 (11%)
Query: 128 TFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
TF G G +E I+ ++GA D + N LS Q+RNLERA VLDR GLI++
Sbjct: 57 TFIGSGKLEEIREIRELHGA------DIVIFNHALSPSQERNLERALKSRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L Y +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEYMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++E+VR R R AR R + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLGARIKAIHKRLEKVRTQRDQNRRARARAE------IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL +AL++S++++ +LFATLDP L+ + + V+L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTESEVYAADQLFATLDPTLRRLNVADVGPVVLADTVGFIRHLPHKLVE 266
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+F ATL+E EA LLVHV+D P+ + + V VL+++G + + V NKID
Sbjct: 267 SFRATLQEAAEASLLVHVIDAADPDRDFNVAQVDTVLEEIGAGD---VPQLLVMNKID 321
>gi|387926943|ref|ZP_10129622.1| GTP-binding proten HflX [Bacillus methanolicus PB1]
gi|387589087|gb|EIJ81407.1| GTP-binding proten HflX [Bacillus methanolicus PB1]
Length = 419
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 170/304 (55%), Gaps = 31/304 (10%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K + T+ G G VE +K ++ E+ D + N LS Q RNL R ++DR
Sbjct: 50 KRERIHPSTYIGKGKVEELKALVDELEA----DVVIFNHELSPSQNRNLLRHLNARIIDR 105
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI++IF A TKE KLQ ELA L Y RL G G + R
Sbjct: 106 TQLILDIFAQRARTKEGKLQVELAQLRYLLPRL----GGKG-------------TELSRL 148
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
+GG G G GET+L+ RR I R + +Q++ + + R R R+++
Sbjct: 149 AGGIG-TRGPGETKLESDRRHIRRRIDDIKTQLKVIVQHRDRYRERRKKNKAFQ------ 201
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDL 359
+A+VGYTNAGKSTL + L+++D F + +LFATLDP + ++LPSG VLL+DTVGFI DL
Sbjct: 202 IALVGYTNAGKSTLFNRLAEADSFEENQLFATLDPMTRKLILPSGFTVLLTDTVGFIQDL 261
Query: 360 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 419
P L+ AF +TLEEV EADLL+HV+D + P+ +H TV ++L+ + + + I V+
Sbjct: 262 PTTLIAAFRSTLEEVKEADLLLHVVDMSNPDYFQHEKTVNELLEDLQIQQIP---QITVY 318
Query: 420 NKID 423
NK D
Sbjct: 319 NKKD 322
>gi|307729255|ref|YP_003906479.1| GTP-binding proten HflX [Burkholderia sp. CCGE1003]
gi|307583790|gb|ADN57188.1| GTP-binding proten HflX [Burkholderia sp. CCGE1003]
Length = 390
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 180/335 (53%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLE+A + V+DR LI
Sbjct: 47 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLEQALNRRVVDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R+ +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKALKSRLDKLRRQHGTQRRQRSRNQ------TMSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +V++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAANQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 256
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 313
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E E ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGEAVERDEYGNISRVFLSARTGQGLD 348
>gi|410096404|ref|ZP_11291391.1| GTP-binding protein HflX [Parabacteroides goldsteinii CL02T12C30]
gi|409226368|gb|EKN19277.1| GTP-binding protein HflX [Parabacteroides goldsteinii CL02T12C30]
Length = 403
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 168/296 (56%), Gaps = 34/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q RN+E+ +LDR LI++IF
Sbjct: 62 TFVGTGKLQEIKEYV----IENEIGLVIFDDELSPKQLRNIEKELQVKILDRTSLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 ASRAQTANAKTQVELAQYKYMLPRLTRLW-----------------THLERQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ +R IL++ + L + ++ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGETQLETDKRIILDKIAKLKRDLVDIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ LS SD+F++ +LFATLD ++ V++ LLSDTVGFI LP +LV++F
Sbjct: 212 VGKSTLMNQLSKSDVFAENKLFATLDTTVRKVIV-ENLPFLLSDTVGFIRKLPTELVESF 270
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+EV EADLLVHV+D + P EE V + L ++ +E K MI V+NKID
Sbjct: 271 KSTLDEVREADLLVHVVDISHPTFEEQIEVVNKTLAEIDKTE---KPMIMVFNKID 323
>gi|288926220|ref|ZP_06420146.1| GTP-binding protein HflX [Prevotella buccae D17]
gi|288336999|gb|EFC75359.1| GTP-binding protein HflX [Prevotella buccae D17]
Length = 416
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 179/329 (54%), Gaps = 22/329 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGELDAIFV 156
Y D F + V V+ + + G T+ G G +E IK +I E + E+ +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVGGPNQTTYVGKGKLEEIKQYIQQEEDEEREIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
R + QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 RQKVTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVV-DNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPDFEEQIK 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
V L ++G +++ +MI V+NKID +
Sbjct: 314 VVENTLGELGCADK--PSMI-VFNKIDNY 339
>gi|302346272|ref|YP_003814570.1| GTP-binding protein HflX [Prevotella melaninogenica ATCC 25845]
gi|302150862|gb|ADK97123.1| GTP-binding protein HflX [Prevotella melaninogenica ATCC 25845]
Length = 416
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 172/300 (57%), Gaps = 23/300 (7%)
Query: 128 TFFGPGTVETIKCHINGAESKGE-LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
T+ G G +E I+ +I E + E + + + LS Q RN+E+ G +LDR LI++I
Sbjct: 62 TYVGKGKLEEIRDYIKMKEDEEEPIGMVIFDDELSAKQMRNIEQELGVKILDRTSLILDI 121
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A T AK Q ELA Y RL R+ E + + G G +
Sbjct: 122 FAMRAQTANAKTQVELAQYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGL 172
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+L++ RR IL+R + L ++ E+ + + QR R R + VA+VGYT
Sbjct: 173 RGPGETQLEMDRRIILQRMTLLKQRLAEIDKQKVTQRKNRGR--------MIRVALVGYT 224
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
N GKST ++ L+ S++F++ +LFATLD ++ VV+ LL+DTVGFI LP LVD+
Sbjct: 225 NVGKSTTMNLLAKSEVFAENKLFATLDTTVRKVVV-DNLPFLLADTVGFIRKLPTDLVDS 283
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 425
F +TL+EV EADLL+HV+D + P+ EE V Q L ++G +++ +MI ++NKID YH
Sbjct: 284 FKSTLDEVREADLLLHVVDISHPDFEEQIQVVNQTLSELGCADK--PSMI-IFNKIDNYH 340
>gi|340347601|ref|ZP_08670709.1| GTP-binding protein HflX [Prevotella dentalis DSM 3688]
gi|433652495|ref|YP_007296349.1| GTP-binding protein HflX [Prevotella dentalis DSM 3688]
gi|339609297|gb|EGQ14172.1| GTP-binding protein HflX [Prevotella dentalis DSM 3688]
gi|433303028|gb|AGB28843.1| GTP-binding protein HflX [Prevotella dentalis DSM 3688]
Length = 415
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 181/329 (55%), Gaps = 22/329 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGELDAIFV 156
Y D F + V V+ + + G A T+ G G +E I+ +I + E++ E+ +
Sbjct: 32 YLDELEFLADTAGAVTVRRFTQRVGGPSAVTYVGKGKLEEIRQYIKDEEENEREVGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E A +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIENALQVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRITLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
R + QR R R L VA+VGYTN GKST+++ ++ S++F++ +LFATLD +
Sbjct: 203 RQKTTQRKNRGR--------LIRVALVGYTNVGKSTIMNLMAKSEVFAEDKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVV-ENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIE 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
V Q L+++ +E K + V+NK D +
Sbjct: 314 VVNQTLKELDCAE---KPTMMVFNKTDKY 339
>gi|402572911|ref|YP_006622254.1| GTP-binding protein HflX [Desulfosporosinus meridiei DSM 13257]
gi|402254108|gb|AFQ44383.1| GTP-binding protein HflX [Desulfosporosinus meridiei DSM 13257]
Length = 536
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 176/315 (55%), Gaps = 39/315 (12%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
+ G+ R ++FG G +E + + ++ + + + LS Q R LE G VLDR
Sbjct: 220 RYGQTR--SYFGSGKLEELIHRLQETDA----NVLICDDELSPTQLRTLEAETGLKVLDR 273
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
GLI++IF A ++E KLQ ELA L + L TG+ +S G G
Sbjct: 274 TGLILDIFAQRAQSREGKLQVELAQLKHLLPHL--------------TGQGLALSRLGAG 319
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
G RG GET+L+L RRR+ +R + L +++ V + R V R R R G L
Sbjct: 320 VGSRG----PGETKLELDRRRMRDRINQLEKELKLVLQQRDVLRRQRTRSG------LPL 369
Query: 300 VAVVGYTNAGKSTLVS-----ALSDSDL-FSDARLFATLDPRLKSVVLPSGRKVLLSDTV 353
+A+VGYTNAGK+T ++ A S SDL + +LFATLDP ++S+ + S ++LLSDTV
Sbjct: 370 IALVGYTNAGKTTFMTKAMEQAGSRSDLPVGENKLFATLDPIVRSIRIDSSLEILLSDTV 429
Query: 354 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 413
GFI LP QL+ AF ATLEEV +AD+L+H++D + P H TV +VL Q+ E K
Sbjct: 430 GFIRKLPTQLLRAFMATLEEVKQADVLIHIVDASHPQAVHHAETVHEVLSQL---ESADK 486
Query: 414 NMIEVWNKIDYHDEE 428
MI + NKID EE
Sbjct: 487 PMITLLNKIDQVYEE 501
>gi|323526572|ref|YP_004228725.1| GTP-binding proten HflX [Burkholderia sp. CCGE1001]
gi|323383574|gb|ADX55665.1| GTP-binding proten HflX [Burkholderia sp. CCGE1001]
Length = 395
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 180/335 (53%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLE+A + V+DR LI
Sbjct: 52 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLEQALNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R+ +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKALKSRLDKLRRQHGTQRRQRSRNQT------MSVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +V++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 261
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 318
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E E ++ D+ N SR T + +D
Sbjct: 319 DAVPELAARGEAVERDEYGNISRVFLSARTGQGLD 353
>gi|421496805|ref|ZP_15944012.1| GTP-binding protein HflX [Aeromonas media WS]
gi|407184192|gb|EKE58042.1| GTP-binding protein HflX [Aeromonas media WS]
Length = 428
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 169/300 (56%), Gaps = 35/300 (11%)
Query: 126 ADTFFGPGTVETIKCHIN--GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E I + GA D + N L+ Q+RNLER + V+DR GLI
Sbjct: 54 AKFFVGSGKAEEIASQVQMLGA------DVVIFNHALTPAQERNLERLFQCRVVDRTGLI 107
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A T E KLQ ELA L + +RLVR G T R GG
Sbjct: 108 LDIFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGI 150
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR + ER +L ++++V + R R AR R+ + TV++V
Sbjct: 151 G-LRGPGETQLETDRRLLRERIKAILRRLDKVAKQREQGRRARNRNE------VPTVSLV 203
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQL 363
GYTNAGKSTL + L+D+ +++ +LFATLDP L+ +V+ V+L+DTVGFI LP L
Sbjct: 204 GYTNAGKSTLFNQLTDASVYAADQLFATLDPTLRKLVIQDVGDVILADTVGFIRHLPHDL 263
Query: 364 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
V AF ATL+E EADLL+HV+DC ++E+ +V VL ++ E + + + NKID
Sbjct: 264 VAAFKATLQETREADLLLHVVDCADEQMQENVDSVQTVLAEI---EADDRPQLMICNKID 320
>gi|390568829|ref|ZP_10249121.1| GTP-binding proten HflX [Burkholderia terrae BS001]
gi|389939178|gb|EIN01015.1| GTP-binding proten HflX [Burkholderia terrae BS001]
Length = 414
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 183/335 (54%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N ++D + N L+ QQRNLER + V+DR LI
Sbjct: 52 AAMFVGSGKAEELRLACEAN------DIDIVIFNHALAPAQQRNLERTLNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L ++E++RR QR AR R+ +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKMLKGRLEKLRRQHGTQRRARARNR------TMSVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-RKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGEEVGQIVVSDTVGFIRELPHQ 261
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ + V VL+++G + ++ ++ V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNDVLREIGA--DTIRQVL-VFNKI 318
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E + ++ D+ N SR T + +D
Sbjct: 319 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|406675767|ref|ZP_11082954.1| GTP-binding protein HflX [Aeromonas veronii AMC35]
gi|423202838|ref|ZP_17189417.1| GTP-binding protein HflX [Aeromonas veronii AER39]
gi|423203899|ref|ZP_17190455.1| GTP-binding protein HflX [Aeromonas veronii AMC34]
gi|404614434|gb|EKB11433.1| GTP-binding protein HflX [Aeromonas veronii AER39]
gi|404627157|gb|EKB23963.1| GTP-binding protein HflX [Aeromonas veronii AMC35]
gi|404628265|gb|EKB25049.1| GTP-binding protein HflX [Aeromonas veronii AMC34]
Length = 428
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 169/298 (56%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E I + ++ D + N L+ Q+RNLER + V+DR GLI++
Sbjct: 54 AKFFVGSGKAEEIASQVQMLDA----DVVIFNHALTPAQERNLERLFQCRVVDRTGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER +L ++++V + R R AR R+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKAILRRLDKVAKQREQGRRARNRNE------VPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ + +++ +LFATLDP L+ +V+ V+L+DTVGFI LP LV
Sbjct: 206 TNAGKSTLFNQLTAASVYAADQLFATLDPTLRKLVIRDVGDVILADTVGFIRHLPHDLVA 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATL+E EADLL+HV+DC ++E+ +V QVL ++ E + + + NKID
Sbjct: 266 AFKATLQETREADLLLHVVDCADEQMQENIDSVQQVLAEI---EADDRPQLMICNKID 320
>gi|154494034|ref|ZP_02033354.1| hypothetical protein PARMER_03379 [Parabacteroides merdae ATCC
43184]
gi|423722762|ref|ZP_17696915.1| GTP-binding protein HflX [Parabacteroides merdae CL09T00C40]
gi|154086294|gb|EDN85339.1| GTP-binding protein HflX [Parabacteroides merdae ATCC 43184]
gi|409242035|gb|EKN34800.1| GTP-binding protein HflX [Parabacteroides merdae CL09T00C40]
Length = 403
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 167/296 (56%), Gaps = 34/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q RN+E+ +LDR LI++IF
Sbjct: 62 TFVGSGKLQEIKEYV----VENEIGLVIFDDELSTKQLRNIEKELQVKILDRTNLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 ARRAQTAHAKTQVELAQYKYMLPRLTRLW-----------------THLERQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ +R IL++ S L + E+ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGETQLETDKRIILDKISKLKRDLVEIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ LS S++F++ +LFATLD ++ V++ LLSDTVGFI LP +LV++F
Sbjct: 212 VGKSTLMNLLSKSEVFAENKLFATLDTTVRKVIV-DNLPFLLSDTVGFIRKLPTELVESF 270
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+EV EADLLVHV+D + P EE V + L ++ +E K MI V+NKID
Sbjct: 271 KSTLDEVREADLLVHVVDISHPTFEEQIEVVNRTLSEIDKTE---KPMIMVFNKID 323
>gi|50086023|ref|YP_047533.1| GTP-binding protein [Acinetobacter sp. ADP1]
gi|49531999|emb|CAG69711.1| GTP-binding protein [Acinetobacter sp. ADP1]
Length = 444
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 177/308 (57%), Gaps = 35/308 (11%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRV 180
K A F G G E I AE LDA + + LS Q+RNLE+ V+DR
Sbjct: 52 KPDAKLFIGSGKAEEI------AERVEALDASLVIFDHALSPAQERNLEKIMKCRVIDRT 105
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLI++IF A T E KLQ ELA L + +RLVR G +G E +
Sbjct: 106 GLILDIFAQRARTHEGKLQVELAQLKHLSTRLVR----------GWSGGFE------QQK 149
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG G + G GET+L+ RR I R L ++++V++TR RAAR++ + TV
Sbjct: 150 GGIG-LRGPGETQLETDRRLIRIRMIQLKDKLDKVQQTRLQGRAARQK------AAIPTV 202
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ + V+L+DTVGF+ +L
Sbjct: 203 SLVGYTNAGKSTLFNHLANSDVYAADQLFATLDPTLRRLDWDGIGTVVLADTVGFVRNLQ 262
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
L+++F ATLEE +EA LL+H++D ++P++ E V VL+++G L+ V+N
Sbjct: 263 HDLIESFKATLEETLEATLLLHIIDSSSPDMLEQIEAVEGVLKEIGADAPVLR----VYN 318
Query: 421 KIDYHDEE 428
KID +E
Sbjct: 319 KIDVSGDE 326
>gi|167035934|ref|YP_001671165.1| GTP-binding proten HflX [Pseudomonas putida GB-1]
gi|386014166|ref|YP_005932443.1| protein HflX [Pseudomonas putida BIRD-1]
gi|166862422|gb|ABZ00830.1| GTP-binding proten HflX [Pseudomonas putida GB-1]
gi|313500872|gb|ADR62238.1| HflX [Pseudomonas putida BIRD-1]
Length = 433
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 173/298 (58%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE + ++ + +D + N L+ Q+RNLER + VLDR GLI++
Sbjct: 55 AKYLIGSGKVEELHDLVHAEQ----VDLVIFNHTLTPSQERNLERVFECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + S++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKSRLEKVRSQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL +AL++S++++ +LFATLDP L+ + L ++L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTESEVYAADQLFATLDPTLRRLELNDLGPIVLADTVGFIRHLPHKLVE 266
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATLEE +DLL+HV+D P E VL VL ++G E L ++EV+NK+D
Sbjct: 267 AFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGA--EGLP-ILEVYNKLD 321
>gi|60680164|ref|YP_210308.1| GTP-binding protein [Bacteroides fragilis NCTC 9343]
gi|265765306|ref|ZP_06093581.1| GTP-binding protein HflX [Bacteroides sp. 2_1_16]
gi|375357007|ref|YP_005109779.1| putative GTP-binding protein [Bacteroides fragilis 638R]
gi|383116925|ref|ZP_09937672.1| GTP-binding protein HflX [Bacteroides sp. 3_2_5]
gi|423259039|ref|ZP_17239962.1| GTP-binding protein HflX [Bacteroides fragilis CL07T00C01]
gi|423263990|ref|ZP_17242993.1| GTP-binding protein HflX [Bacteroides fragilis CL07T12C05]
gi|423269424|ref|ZP_17248396.1| GTP-binding protein HflX [Bacteroides fragilis CL05T00C42]
gi|423273016|ref|ZP_17251963.1| GTP-binding protein HflX [Bacteroides fragilis CL05T12C13]
gi|423282112|ref|ZP_17260997.1| GTP-binding protein HflX [Bacteroides fragilis HMW 615]
gi|60491598|emb|CAH06350.1| putative GTP-binding protein [Bacteroides fragilis NCTC 9343]
gi|251947783|gb|EES88065.1| GTP-binding protein HflX [Bacteroides sp. 3_2_5]
gi|263254690|gb|EEZ26124.1| GTP-binding protein HflX [Bacteroides sp. 2_1_16]
gi|301161688|emb|CBW21228.1| putative GTP-binding protein [Bacteroides fragilis 638R]
gi|387776619|gb|EIK38719.1| GTP-binding protein HflX [Bacteroides fragilis CL07T00C01]
gi|392701218|gb|EIY94378.1| GTP-binding protein HflX [Bacteroides fragilis CL05T00C42]
gi|392706256|gb|EIY99379.1| GTP-binding protein HflX [Bacteroides fragilis CL07T12C05]
gi|392708580|gb|EIZ01687.1| GTP-binding protein HflX [Bacteroides fragilis CL05T12C13]
gi|404582599|gb|EKA87293.1| GTP-binding protein HflX [Bacteroides fragilis HMW 615]
Length = 417
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 180/335 (53%), Gaps = 23/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN-GAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I AE E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIKEYIRIEAEEDRE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ T E S +G G RG GET+L++ RR IL R S L
Sbjct: 146 RLQRL------WTHLERQGGGSGSGKGGSVGLRG----PGETQLEMDRRIILNRMSLLKE 195
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 196 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTMMNLLAKSEVFAENKLFA 247
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 248 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPG 306
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G K MI ++NKID +
Sbjct: 307 FEEQIEVVNKTLADIGGGG---KPMILIFNKIDAY 338
>gi|393786613|ref|ZP_10374745.1| GTP-binding protein HflX [Bacteroides nordii CL02T12C05]
gi|392657848|gb|EIY51478.1| GTP-binding protein HflX [Bacteroides nordii CL02T12C05]
Length = 421
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 182/335 (54%), Gaps = 21/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + Y D F E VV+ + K A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTKEYLDELEFLAETAGAEVVKKFTQKLPTANSVTYVGKGKLEEIKEYILNEEENERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ + S G G GG + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL--------WTHLERQGGGSGSGSGKGGSVGLRGPGETQLEMDRRIILNRMSLLKE 197
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 198 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFA 249
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+HV+D + P
Sbjct: 250 TLDTTVRKVII-ENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPG 308
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G + K MI ++NKID +
Sbjct: 309 FEEQIEVVNKTLADIGGAG---KPMILIFNKIDAY 340
>gi|411010558|ref|ZP_11386887.1| GTP-binding protein HflX [Aeromonas aquariorum AAK1]
gi|423198006|ref|ZP_17184589.1| GTP-binding protein HflX [Aeromonas hydrophila SSU]
gi|404630817|gb|EKB27467.1| GTP-binding protein HflX [Aeromonas hydrophila SSU]
Length = 428
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 169/298 (56%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E I + ++ D + N L+ Q+RNLER + V+DR GLI++
Sbjct: 54 AKFFVGSGKAEEIASQVQMLDA----DVVIFNHALTPAQERNLERLFQCRVVDRTGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER +L ++++V + R R AR R+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKAILRRLDKVAKQREQGRRARNRNE------VPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL + L+ + +++ +LFATLDP L+ +V+ V+L+DTVGFI LP LV
Sbjct: 206 TNAGKSTLFNQLTAASVYAADQLFATLDPTLRKLVIRDVGDVILADTVGFIRHLPHDLVA 265
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATL+E EADLL+HV+DC ++E+ +V QVL ++ E + + + NKID
Sbjct: 266 AFKATLQETREADLLLHVVDCADEQMQENIESVQQVLAEI---EADDRPQLMICNKID 320
>gi|431804715|ref|YP_007231618.1| GTP-binding protein HflX [Pseudomonas putida HB3267]
gi|430795480|gb|AGA75675.1| GTP-binding protein HflX [Pseudomonas putida HB3267]
Length = 433
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 173/298 (58%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE + ++ + +D + N L+ Q+RNLER + VLDR GLI++
Sbjct: 55 AKYLIGSGKVEELHDLVHAEQ----VDLVIFNHTLTPSQERNLERVFECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + S++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKSRLEKVRSQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL +AL++S++++ +LFATLDP L+ + L ++L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTESEVYAADQLFATLDPTLRRLELNDLGPIVLADTVGFIRHLPHKLVE 266
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATLEE +DLL+HV+D P E VL VL ++G E L ++EV+NK+D
Sbjct: 267 AFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGA--EGLP-ILEVYNKLD 321
>gi|372222509|ref|ZP_09500930.1| GTP-binding protein HflX [Mesoflavibacter zeaxanthinifaciens S86]
Length = 409
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 174/313 (55%), Gaps = 39/313 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E + ++ + ++ ++ + L+ QQ N+E+ V+DR LI++IF
Sbjct: 60 TYIGTGKMEEVHAYV----KENDISSVIFDDELTPAQQNNIEKLLKCKVMDRTSLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAKTSYARTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ ++ R QR R L VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLSKIDRQMETQRGNRG--------ALVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S SD+F++ +LFATLD ++ VV+ LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNVISKSDVFAENKLFATLDTTVRKVVI-GNLPFLLSDTVGFIRKLPTQLVESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID +
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEEHIASVNQILDEIDSTD---KETIMVFNKIDQYVP 325
Query: 428 EMGDVEYIDGDDI 440
E+ I+ DD+
Sbjct: 326 EV-----IEEDDL 333
>gi|53711962|ref|YP_097954.1| GTP-binding protein [Bacteroides fragilis YCH46]
gi|52214827|dbj|BAD47420.1| GTP-binding protein [Bacteroides fragilis YCH46]
Length = 417
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 180/335 (53%), Gaps = 23/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN-GAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I AE E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIKEYIRIEAEEDRE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ T E S +G G RG GET+L++ RR IL R S L
Sbjct: 146 RLQRL------WTHLERQGGGSGSGKGGSVGLRG----PGETQLEMDRRIILNRMSLLKE 195
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 196 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTMMNLLAKSEVFAENKLFA 247
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 248 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPG 306
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G K MI ++NKID +
Sbjct: 307 FEEQIEVVNKTLADIGGGG---KPMILIFNKIDAY 338
>gi|228990846|ref|ZP_04150811.1| hypothetical protein bpmyx0001_16080 [Bacillus pseudomycoides DSM
12442]
gi|228996944|ref|ZP_04156577.1| hypothetical protein bmyco0003_15280 [Bacillus mycoides Rock3-17]
gi|228762823|gb|EEM11737.1| hypothetical protein bmyco0003_15280 [Bacillus mycoides Rock3-17]
gi|228769372|gb|EEM17970.1| hypothetical protein bpmyx0001_16080 [Bacillus pseudomycoides DSM
12442]
Length = 419
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 172/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + + A++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVSAFVKEADA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ + L ++E + R QR R+++ + V++VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQIAVLNKELEALVAQRQTQRKQRKKNE------IPVVSLVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST+++ + ++ +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTIMNTMLEIFNGSTEKQVFEKDMLFATLETSVRNIELPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ Q L+Q+GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIEITNQTLKQIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ ++
Sbjct: 325 KSDMMDVEIPKIQ 337
>gi|420254112|ref|ZP_14757133.1| GTP-binding protein HflX [Burkholderia sp. BT03]
gi|398050091|gb|EJL42479.1| GTP-binding protein HflX [Burkholderia sp. BT03]
Length = 409
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 183/335 (54%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N ++D + N L+ QQRNLER + V+DR LI
Sbjct: 47 AAMFVGSGKAEELRLACEAN------DIDIVIFNHALAPAQQRNLERTLNRRVVDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L ++E++RR QR AR R+ +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKMLKGRLEKLRRQHGTQRRARARNR------TMSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-RKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGEEVGQIVVSDTVGFIRELPHQ 256
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ + V VL+++G + ++ ++ V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNDVLREIGA--DTIRQVL-VFNKI 313
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E + ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|334145954|ref|YP_004508881.1| GTP-binding protein HflX [Porphyromonas gingivalis TDC60]
gi|333803108|dbj|BAK24315.1| GTP-binding protein HflX [Porphyromonas gingivalis TDC60]
Length = 406
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 167/296 (56%), Gaps = 33/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ I+ ++ + E+ + + LS Q RN+E+ +LDR GLI++IF
Sbjct: 62 TFVGKGKLDEIRAYVQ----ENEIGMVVFDDELSPKQLRNIEKELQTKILDRTGLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
T AK Q ELA Y RL G T E R GG G +
Sbjct: 118 ARRVQTAHAKTQVELAQYQYMLPRLT------GLWTHLE-----------RQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+ RR +L++ + L ++ ++ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGEKQLETDRRIVLDKIARLKEELRDIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ LS S++F++ +LFATLD ++ V++ LLSDTVGFI LP QLV++F
Sbjct: 212 VGKSTLMNVLSKSEVFAENKLFATLDTTVRKVII-DNLPFLLSDTVGFIRKLPTQLVESF 270
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+EV EADLLVHV+D + P EE V Q L ++ EE K M+ ++NKID
Sbjct: 271 KSTLDEVREADLLVHVVDMSHPAFEEQIEVVNQTLAEITAGEE--KPMLLLFNKID 324
>gi|325271234|ref|ZP_08137779.1| GTP-binding protein HflX [Pseudomonas sp. TJI-51]
gi|324103637|gb|EGC00939.1| GTP-binding protein HflX [Pseudomonas sp. TJI-51]
Length = 433
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 173/298 (58%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE + ++ + +D + N L+ Q+RNLER + VLDR GLI++
Sbjct: 55 AKYLIGSGKVEELHDLVHAEQ----VDLVIFNHTLTPSQERNLERVFECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + S++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKSRLEKVRSQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL +AL++S++++ +LFATLDP L+ + L ++L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTESEVYAADQLFATLDPTLRRLELNDLGPIVLADTVGFIRHLPHKLVE 266
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATLEE +DLL+HV+D P E VL VL ++G E L ++EV+NK+D
Sbjct: 267 AFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGA--EGLP-ILEVYNKLD 321
>gi|261880653|ref|ZP_06007080.1| GTP-binding protein HflX [Prevotella bergensis DSM 17361]
gi|270332606|gb|EFA43392.1| GTP-binding protein HflX [Prevotella bergensis DSM 17361]
Length = 411
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/379 (34%), Positives = 195/379 (51%), Gaps = 27/379 (7%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGELDAIFV 156
Y D F + V V+ + K G T+ G G + IK +I E ++ E+ +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQKVGGVNQTTYVGKGKLAEIKQYIQEEEDNEREVGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSARQLRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRLW 151
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
R G G + G GET+L++ RR IL+R + L ++ ++
Sbjct: 152 THLER-------------QGGGSGNGSVGLRGPGETQLEMDRRIILQRITLLKQRLVDID 198
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ +A QR R R L VA+VGYTN GKST+++ LS SD+F++ +LFATLD +
Sbjct: 199 KQKATQRKNRGR--------LIRVALVGYTNVGKSTIMNLLSKSDVFAENKLFATLDTTV 250
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE +
Sbjct: 251 RKVVI-GNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIS 309
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPV 456
V + L+ +G S+ K I V+NK D + + + + + N S + + T +
Sbjct: 310 VVNETLKDLGCSD---KPQIVVFNKTDNYQWVEKEPDDLTPETKENLSLDDLQKTWMAKL 366
Query: 457 DVECIDNYGGDDADNNDGF 475
D C+ + DN D F
Sbjct: 367 DENCL-FISAKNKDNIDEF 384
>gi|254442831|ref|ZP_05056307.1| GTP-binding proten HflX [Verrucomicrobiae bacterium DG1235]
gi|198257139|gb|EDY81447.1| GTP-binding proten HflX [Verrucomicrobiae bacterium DG1235]
Length = 435
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 174/306 (56%), Gaps = 32/306 (10%)
Query: 119 LKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLD 178
+K KA G G V+ + H E+ D I + L+ QQRN E V+D
Sbjct: 53 VKLRKANPAFLLGTGKVQELIAHAKEIEA----DVIIFDDELTPAQQRNWEAEAKIAVID 108
Query: 179 RVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR 238
R +II+IF+ AHTKEA LQ LA + Y RL R + R
Sbjct: 109 RQEIIIDIFSERAHTKEASLQVALARMEYSLPRLRRAW-----------------THLSR 151
Query: 239 GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
GG G GET+L+ R I +R + +++EV + R VQRA R R + +
Sbjct: 152 QRGGGTGARGQGETQLEADSRMIRDRIAITKKELKEVIQHRHVQRAKRLR------KPVP 205
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
TVA+VGYTNAGKS+L++ ++DSD+ + +LFATLDP + + L + + VL++DTVGF+
Sbjct: 206 TVAIVGYTNAGKSSLLNTMTDSDVLAADKLFATLDPTTRRLELDNSQHVLVTDTVGFVRR 265
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN-MIE 417
LP +LV+AF ATLEE V ADLL+HV+D T P+ E+H T ++VL+++ E KN M+
Sbjct: 266 LPHRLVEAFKATLEEAVVADLLIHVVDVTNPDAEKHFQTTMEVLKEI----EADKNPMLV 321
Query: 418 VWNKID 423
V+NKID
Sbjct: 322 VFNKID 327
>gi|26991571|ref|NP_746996.1| GTP-binding protein HflX [Pseudomonas putida KT2440]
gi|148549971|ref|YP_001270073.1| HSR1-related GTP-binding protein [Pseudomonas putida F1]
gi|395445736|ref|YP_006385989.1| GTP-binding protein HflX [Pseudomonas putida ND6]
gi|397695351|ref|YP_006533233.1| GTP-binding protein HflX [Pseudomonas putida DOT-T1E]
gi|421523721|ref|ZP_15970350.1| GTP-binding protein HflX [Pseudomonas putida LS46]
gi|24986658|gb|AAN70460.1|AE016687_7 GTP-binding protein HflX [Pseudomonas putida KT2440]
gi|148514029|gb|ABQ80889.1| GTP-binding protein HflX [Pseudomonas putida F1]
gi|388559733|gb|AFK68874.1| GTP-binding protein HflX [Pseudomonas putida ND6]
gi|397332081|gb|AFO48440.1| GTP-binding protein HflX [Pseudomonas putida DOT-T1E]
gi|402752707|gb|EJX13212.1| GTP-binding protein HflX [Pseudomonas putida LS46]
Length = 433
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 173/298 (58%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE + ++ + +D + N L+ Q+RNLER + VLDR GLI++
Sbjct: 55 AKYLIGSGKVEELHDLVHAEQ----VDLVIFNHTLTPSQERNLERVFECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + S++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKSRLEKVRSQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL +AL++S++++ +LFATLDP L+ + L ++L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTESEVYAADQLFATLDPTLRRLELNDLGPIVLADTVGFIRHLPHKLVE 266
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATLEE +DLL+HV+D P E VL VL ++G E L ++EV+NK+D
Sbjct: 267 AFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGA--EGLP-ILEVYNKLD 321
>gi|429749155|ref|ZP_19282295.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 332 str.
F0381]
gi|429168924|gb|EKY10725.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 332 str.
F0381]
Length = 403
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 170/302 (56%), Gaps = 34/302 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ ++ + E+ + + L+ QQ+N+E +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQYV----EENEVGTVIFDDELTPAQQKNIEHILKVKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLSAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S SD+F++ +LFATLD ++ VV+ LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSDVFAENKLFATLDTTVRKVVI-ENLPFLLSDTVGFIRKLPTQLIESF 268
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL+EV EADLL+HV+D + PN E+H +V Q+L ++ E K I V+NKID +
Sbjct: 269 KSTLDEVREADLLLHVVDISHPNFEDHIHSVNQILAEI---ESANKPTIMVFNKIDAYTH 325
Query: 428 EM 429
E+
Sbjct: 326 EV 327
>gi|407714019|ref|YP_006834584.1| GTP-binding protein HflX [Burkholderia phenoliruptrix BR3459a]
gi|407236203|gb|AFT86402.1| GTP-binding protein HflX [Burkholderia phenoliruptrix BR3459a]
Length = 390
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 180/335 (53%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLE+A + V+DR LI
Sbjct: 47 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLEQALNRRVVDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R+ +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKALKSRLDKLRRQHGTQRRQRSRNQT------MSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +V++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 256
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 313
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E E ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGEAVERDEYGNISRVFLSARTGQGLD 348
>gi|423248654|ref|ZP_17229670.1| GTP-binding protein HflX [Bacteroides fragilis CL03T00C08]
gi|423253603|ref|ZP_17234534.1| GTP-binding protein HflX [Bacteroides fragilis CL03T12C07]
gi|392655232|gb|EIY48875.1| GTP-binding protein HflX [Bacteroides fragilis CL03T12C07]
gi|392657595|gb|EIY51226.1| GTP-binding protein HflX [Bacteroides fragilis CL03T00C08]
Length = 417
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 180/335 (53%), Gaps = 23/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN-GAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I AE E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIKEYIRIEAEEDRE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ T E S +G G RG GET+L++ RR IL R S L
Sbjct: 146 RLQRL------WTHLERQGGGSGSGKGGSVGLRG----PGETQLEMDRRIILNRMSLLKE 195
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 196 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTMMNLLAKSEVFAENKLFA 247
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 248 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPG 306
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G K MI ++NKID +
Sbjct: 307 FEEQIEVVNKTLADIGGGG---KPMILIFNKIDAY 338
>gi|334341343|ref|YP_004546323.1| GTP-binding proten HflX [Desulfotomaculum ruminis DSM 2154]
gi|334092697|gb|AEG61037.1| GTP-binding proten HflX [Desulfotomaculum ruminis DSM 2154]
Length = 417
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 169/298 (56%), Gaps = 35/298 (11%)
Query: 128 TFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
TF G G VE + C GA + I + LS Q RNLE G V+DR LI++
Sbjct: 60 TFIGRGKVEELADYCQEVGA------NLIIFDRELSPAQARNLEERIGHKVIDRTQLILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A TKE KLQ ELA L Y RL TG+ +S G G G
Sbjct: 114 IFARRAQTKEGKLQVELAQLKYLLPRL--------------TGQGNQLSRLGGGIGT--- 156
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GET+L+ RRRI +R S L +++EV+R RA+ R R+ L V++VGY
Sbjct: 157 -RGPGETKLETDRRRIRKRISDLEQELKEVQRHRALLRQDRKVEP------LPLVSLVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL+ L+ +++ + +LFATLDP + VVLP+ +LL+DTVGFI +LP LV
Sbjct: 210 TNAGKSTLLRTLTGAEVLVEDKLFATLDPTTRRVVLPNNDIILLTDTVGFIQNLPHHLVA 269
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATLEEV EADLL+HV+D + P EE V VL+ + S K +I V+NK+D
Sbjct: 270 AFRATLEEVQEADLLLHVVDVSHPYCEEQIRAVDGVLESLKASH---KPVIMVYNKMD 324
>gi|262281583|ref|ZP_06059361.1| GTP-binding protein HflX [Acinetobacter calcoaceticus RUH2202]
gi|262256959|gb|EEY75699.1| GTP-binding protein HflX [Acinetobacter calcoaceticus RUH2202]
Length = 447
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 181/318 (56%), Gaps = 35/318 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ ++ K F G G VE I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHIKVQRNKPNPKFFIGSGKVEEI------AERVQELEASLVIFDHALSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G + +
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GWSADF 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GET+L+ RR I R + L ++E+V +TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGETQLETDRRLIRVRIAQLKDKLEKVHQTRIQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
+ TV++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + V+L+
Sbjct: 197 ----AAIPTVSLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLA 252
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGF+ +L LV++F ATLEE +EA LL+HV+D + ++ + V VL+++G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSNSHDMLDQIEAVEGVLKEIGADAP 312
Query: 411 KLKNMIEVWNKIDYHDEE 428
L+ V+NKID EE
Sbjct: 313 VLR----VYNKIDLSGEE 326
>gi|145300253|ref|YP_001143094.1| GTP-binding protein HflX [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418357699|ref|ZP_12960389.1| GTP-binding protein HflX [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142853025|gb|ABO91346.1| GTP-binding protein HflX [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356688938|gb|EHI53486.1| GTP-binding protein HflX [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 428
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 174/314 (55%), Gaps = 39/314 (12%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHIN--GAESKGELDAIFVNAILSGIQQRNLE 169
VV N S S K F G G E I + GA D + N L+ Q+RNLE
Sbjct: 44 VVTTNRSAPSAK----LFVGSGKAEEIASQVQMLGA------DVVIFNHALTPAQERNLE 93
Query: 170 RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGE 229
R + V+DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 94 RLFQCRVVDRTGLILDIFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHL 143
Query: 230 AEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
R GG G + G GET+++ RR + ER +L ++++V + R R AR R+
Sbjct: 144 E-------RQKGGIG-LRGPGETQMETDRRLLRERIKAILRRLDKVAKQREQGRRARNRN 195
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLL 349
+ TV++VGYTNAGKSTL + L+ + +++ +LFATLDP L+ +V+ V+L
Sbjct: 196 E------VPTVSLVGYTNAGKSTLFNQLTAASVYAADQLFATLDPTLRKLVIRDVGDVIL 249
Query: 350 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 409
+DTVGFI LP LV AF ATL+E EADLL+HV+DC ++E+ +V QVL ++ E
Sbjct: 250 ADTVGFIRHLPHDLVAAFKATLQETREADLLLHVVDCADEQMQENIDSVQQVLAEI---E 306
Query: 410 EKLKNMIEVWNKID 423
+ + + NKID
Sbjct: 307 ADDRPQLMICNKID 320
>gi|154248821|ref|YP_001409646.1| HSR1-like GTP-binding protein [Fervidobacterium nodosum Rt17-B1]
gi|154152757|gb|ABS59989.1| GTP-binding protein HSR1-related [Fervidobacterium nodosum Rt17-B1]
Length = 421
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 175/308 (56%), Gaps = 36/308 (11%)
Query: 128 TFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G + IK C N +D I ++ ++ IQ RN+E G V+DR +I+E
Sbjct: 54 TYVGSGKLHKIKDYCLANS------IDLIVIDDEITPIQLRNIEEITGLKVVDRTQIILE 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF+ HA T E KLQ E+A L+Y L R+RG L+ GG
Sbjct: 108 IFSKHASTHEGKLQVEMAKLIYD---LPRLRGKGLELS---------------NPGGGIG 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GET L+L RRRI +R S L ++E++R+ R R +R G +VVGY
Sbjct: 150 TRGPGETILELDRRRIKDRISQLKKELEKIRKNRHTVRKSRLESG------YYIFSVVGY 203
Query: 306 TNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL+SALS + D+ ++F+TL+P ++ + LP GR VLLSDTVGFI LP LV
Sbjct: 204 TNAGKSTLLSALSKEEDIIISDKMFSTLNPTVRRIKLPDGRFVLLSDTVGFIRKLPHTLV 263
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
+AFH+TLEE++ +D+++ ++D + N ++ + VL+++ ++ K V+NKID
Sbjct: 264 EAFHSTLEEILYSDVIIILVDVSDTNYKKKLSASFSVLEEIKAND---KPYFIVFNKIDL 320
Query: 425 HDEEMGDV 432
E+ D+
Sbjct: 321 VPEDYLDM 328
>gi|182415919|ref|YP_001820985.1| GTP-binding proten HflX [Opitutus terrae PB90-1]
gi|177843133|gb|ACB77385.1| GTP-binding proten HflX [Opitutus terrae PB90-1]
Length = 425
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 27/278 (9%)
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D I + LS QQRN E G V+DR +I+E+F AHT+EA LQ LA + Y R
Sbjct: 83 DVIVFDEQLSPAQQRNWEELTGLAVIDREEVILEVFADRAHTREAVLQVGLARMEYSLPR 142
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L R A +R RG G G G GET+L+ RR + +R +HL ++
Sbjct: 143 LTR---------------AWTHLSRQRGKGALG---GEGETQLEQDRRIVRDRIAHLKAE 184
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
+ EV + R VQR R R T ++VGYTNAGKS+L++AL+ + + ++ +LFAT
Sbjct: 185 LAEVVQQRGVQRRRRLRVPVP------TASIVGYTNAGKSSLLNALTGATVLAEDKLFAT 238
Query: 332 LDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 391
LDP + + L +K+L++DTVGFI LP +LV+AF ATLEEVV AD L+HVLD P+
Sbjct: 239 LDPTTRQLQLRGNQKLLVTDTVGFIRRLPHRLVEAFKATLEEVVVADFLIHVLDVANPDF 298
Query: 392 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEM 429
E+H T L VLQ++G ++ K ++ V+NK+D EM
Sbjct: 299 EKHHATTLGVLQELGAAD---KTILTVFNKVDIAAPEM 333
>gi|220934077|ref|YP_002512976.1| GTP-binding proten HflX [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995387|gb|ACL71989.1| GTP-binding proten HflX [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 417
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 169/295 (57%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I+ + E++G IF + LS Q+RNLER + VLDR GLI++IF
Sbjct: 42 FVGSGKAEEIREQV---EAQGAEVVIFDHE-LSPSQERNLERLFKCRVLDRTGLILDIFA 97
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 98 QRARSHEGKLQVELAQLRHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 139
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R +L ++E+V R R +RRR + TV++VGYTNA
Sbjct: 140 PGETQLETDRRLLAGRIKQILRRLEKVEAQREQGRQSRRRAE------IPTVSLVGYTNA 193
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+++ +++ +LFATLDP L+ V LP + ++L+DTVGF+ LP LV AF
Sbjct: 194 GKSTLFNRLTNAGVYAADQLFATLDPTLRRVDLPDQQAIILADTVGFVRQLPHDLVAAFK 253
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATL E EA LL+HV+D P E++ V VL+++G +E I V+NKID
Sbjct: 254 ATLTETREASLLLHVVDAADPRREDNIQQVNNVLEEIGAAE---VPRILVYNKID 305
>gi|377556753|ref|ZP_09786439.1| GTP-binding protein HflX [Lactobacillus gastricus PS3]
gi|376167686|gb|EHS86516.1| GTP-binding protein HflX [Lactobacillus gastricus PS3]
Length = 425
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 36/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G VE + ++ I N LS Q +NL A V+DR LI+E
Sbjct: 54 AATYFGKGKVEELANLTAALKAT----TIVANDELSPSQIKNLTDATKTRVIDRTALILE 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A ++EAK+Q E+A L Y RL R+R + ++ + GG G
Sbjct: 110 IFAQRAQSREAKIQVEIAQLQY---RLPRLRTANN------------ITLDQQSGGGAGM 154
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ GAGET++++ RR I SHL ++++E++++ +R+ R D + T A+VG
Sbjct: 155 SNRGAGETQMEMDRRVIQRHISHLRNELKEIQKSEDTKRSQR------DKSAIPTAALVG 208
Query: 305 YTNAGKSTLVSALS-------DSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTNAGKST+++ L D +F LFATLD ++ + L ++ LLSDTVGF+S
Sbjct: 209 YTNAGKSTIMNQLVERYGVSVDKQVFEKDMLFATLDTSVRQLTLKDQKRFLLSDTVGFVS 268
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP QLV+AF +TL E ADLL+ V+D + P+ EE T L Q+G+ + M+
Sbjct: 269 KLPTQLVEAFKSTLAEAANADLLIQVIDYSDPHYEEMIKTTESTLHQIGIEDIP---MVY 325
Query: 418 VWNKID 423
V+NK D
Sbjct: 326 VFNKAD 331
>gi|199599127|ref|ZP_03212531.1| GTPase [Lactobacillus rhamnosus HN001]
gi|258508984|ref|YP_003171735.1| HflX subfamily GTP-binding protein [Lactobacillus rhamnosus GG]
gi|385828632|ref|YP_005866404.1| GTP-binding protein [Lactobacillus rhamnosus GG]
gi|199589950|gb|EDY98052.1| GTPase [Lactobacillus rhamnosus HN001]
gi|257148911|emb|CAR87884.1| GTP-binding protein, HflX subfamily [Lactobacillus rhamnosus GG]
gi|259650277|dbj|BAI42439.1| GTP-binding protein [Lactobacillus rhamnosus GG]
Length = 431
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 166/313 (53%), Gaps = 38/313 (12%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
+A A T+FG G V+ I+ N E+ + +N LS Q RNLE+ V+DR L
Sbjct: 54 RAVAATYFGSGKVDDIRQLANVREAS----TVIINDELSPSQLRNLEKQTKLHVIDRTQL 109
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A +K AK Q E+A L Y RL P + G GG
Sbjct: 110 ILDIFADRARSKAAKTQVEIAQLQYALPRL----HPSANRLDQQVG------------GG 153
Query: 243 RGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
GF + GAGET+L+L RR + +R SHL ++++ V+RA R + + + VA
Sbjct: 154 AGFATRGAGETQLELDRRVLNKRISHLRQELKDASVGDQVRRARR------EDKAIPVVA 207
Query: 302 VVGYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTV 353
+VGYTNAGKST ++ L D +F LFATLD ++ + LP RK LLSDTV
Sbjct: 208 LVGYTNAGKSTTMNGLLQLFADRPEDKQVFEKDMLFATLDTSVRQITLPDNRKFLLSDTV 267
Query: 354 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 413
GF+S LP L+D+F ATL E ADLL+ V+D + N E + L++VG++
Sbjct: 268 GFVSKLPHNLIDSFKATLAEAANADLLIQVVDYSDENYPEMMAITEKTLREVGITNIP-- 325
Query: 414 NMIEVWNKIDYHD 426
MIE +NK D +
Sbjct: 326 -MIEAYNKADLRE 337
>gi|329119487|ref|ZP_08248172.1| GTP-binding protein HflX [Neisseria bacilliformis ATCC BAA-1200]
gi|327464420|gb|EGF10720.1| GTP-binding protein HflX [Neisseria bacilliformis ATCC BAA-1200]
Length = 392
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 175/311 (56%), Gaps = 31/311 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + K +A F G G E + A S+ ++D N L+ Q+RNLE+A
Sbjct: 55 LVCRQTAKRDRAHPALFVGTGKAE----ELAQAVSEQQIDLAVFNHELTPTQERNLEKAL 110
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDRVGLI+ IF A ++E +LQ ELA L + RLVR G +
Sbjct: 111 QCRVLDRVGLILAIFAQRAQSQEGRLQVELAQLTHLSGRLVR-------------GYGHL 157
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
S +G G G + G GET+L+ RR I ++ + L ++E V+R RA +R AR GS
Sbjct: 158 QSQKG-GIG----LKGPGETQLETDRRLIAQKITALKKRLEAVKRQRATRRKAR--QSGS 210
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
L T A+ GYTN GKS+L + L+ +D+ + +LFATLD + + L G +V+L+DT
Sbjct: 211 ----LPTFALAGYTNTGKSSLFNRLTKADVLAKDQLFATLDTTARRLYLAPGTEVILTDT 266
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+ DLP LV AF ATLEE ADL++HV+D + P+ E V +VL+++G + +
Sbjct: 267 VGFVRDLPHSLVAAFSATLEETALADLILHVIDASRPDHERQADDVNRVLEEIGAGD--I 324
Query: 413 KNMIEVWNKID 423
++ V+NK D
Sbjct: 325 PRLL-VYNKTD 334
>gi|293611451|ref|ZP_06693746.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826235|gb|EFF84605.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 447
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 183/318 (57%), Gaps = 35/318 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ ++ K F G G VE I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHVKVQRNKPNPKFFIGSGKVEEI------AEQVQELEASLVIFDHALSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G + +
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GWSADF 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GET+L+ RR I R + L ++++V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGETQLETDRRLIRVRITQLKDKLDKVQQTRMQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
+ T+++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ + V+L+
Sbjct: 197 ----AAIPTISLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTVVLA 252
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++ ++ + V VL+ +G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSHDMLDQIEAVEGVLKDIGADAP 312
Query: 411 KLKNMIEVWNKIDYHDEE 428
L+ V+NKID EE
Sbjct: 313 VLR----VYNKIDLSGEE 326
>gi|421866989|ref|ZP_16298651.1| GTP-binding protein HflX [Burkholderia cenocepacia H111]
gi|358073153|emb|CCE49529.1| GTP-binding protein HflX [Burkholderia cenocepacia H111]
Length = 390
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 181/333 (54%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 47 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 258
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G E ++ ++ V+NKID
Sbjct: 259 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--ETIRQVL-VFNKIDA 315
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 316 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|336408175|ref|ZP_08588669.1| GTP-binding protein HflX [Bacteroides sp. 2_1_56FAA]
gi|335939475|gb|EGN01349.1| GTP-binding protein HflX [Bacteroides sp. 2_1_56FAA]
Length = 417
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 179/335 (53%), Gaps = 23/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN-GAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I AE E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIKEYIRIEAEEDRE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R G G GG + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLERQG----------GGSGSGKGGSVGLRGPGETQLEMDRRIILNRMSLLKE 195
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 196 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTMMNLLAKSEVFAENKLFA 247
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 248 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPG 306
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V + L +G K MI ++NKID +
Sbjct: 307 FEEQIEVVNKTLADIGGGG---KPMILIFNKIDAY 338
>gi|301053404|ref|YP_003791615.1| GTP-binding protein [Bacillus cereus biovar anthracis str. CI]
gi|423552398|ref|ZP_17528725.1| GTP-binding protein HflX [Bacillus cereus ISP3191]
gi|300375573|gb|ADK04477.1| GTP-binding protein [Bacillus cereus biovar anthracis str. CI]
gi|401186340|gb|EJQ93428.1| GTP-binding protein HflX [Bacillus cereus ISP3191]
Length = 419
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + +IN ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYINEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------IPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|238027077|ref|YP_002911308.1| GTP-binding proten HflX [Burkholderia glumae BGR1]
gi|237876271|gb|ACR28604.1| GTP-binding proten HflX [Burkholderia glumae BGR1]
Length = 398
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 180/323 (55%), Gaps = 36/323 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N E+D + N L+ QQRNLER + V+DR LI
Sbjct: 52 AAMFIGSGKAEELRLACDAN------EIDIVIFNHPLAPAQQRNLERTLNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R+ R + +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHNTQRRQRERN-----RTM-SVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 261
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLHEIGA--DAIRQVL-VFNKI 318
Query: 423 DYHDEEMGDVEYIDGDDISNFSR 445
D E + ++ D+ N SR
Sbjct: 319 DAVPELAARGDAVERDEYGNISR 341
>gi|403071126|ref|ZP_10912458.1| GTP-binding protein [Oceanobacillus sp. Ndiop]
Length = 417
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/338 (35%), Positives = 184/338 (54%), Gaps = 43/338 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K + AE +DA+ + L+ Q RN+E V+DR LI+EIF
Sbjct: 53 YLGKGKLEDLKKMVEDAE----VDAVIFDDELTPSQIRNIEETIECEVVDRTMLILEIFA 108
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+E+KLQ E+A L Y RL+ R + GR GG G +
Sbjct: 109 RRAKTRESKLQVEVARLRYMLPRLIGSR-----------------ESLGRQGGGSGLTNR 151
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GET+L+ RR+I E+ + L +++ + R QR R ++ + V++VGYTN
Sbjct: 152 GSGETKLETDRRKIEEQITKLNRELDNLVNQRRTQRKQREKNN------IPVVSLVGYTN 205
Query: 308 AGKSTLVSALSDS-------DLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST+++A+ D+ +F LFATL+ ++ V L + + LL+DTVGFI+ LP
Sbjct: 206 AGKSTIMNAVLDAHNSGIEKQVFEKDMLFATLETSVRKVELETNQTFLLTDTVGFINKLP 265
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV+EADLLVHVLD + P+ EEH ++L+++GV +I +N
Sbjct: 266 HHLVKAFRSTLEEVLEADLLVHVLDVSNPHHEEHLNLTNRILEEIGVDGIP---VIYAYN 322
Query: 421 KIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDV 458
K D + D+ Y D + + A K+ +E ++
Sbjct: 323 KSD-----LADIAYPDVKENEVYLSARKKEGLNELTEL 355
>gi|288556892|ref|YP_003428827.1| GTP binding protein YnbA [Bacillus pseudofirmus OF4]
gi|347602419|sp|D3FTV4.1|HFLX_BACPE RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|288548052|gb|ADC51935.1| YnbA GTP binding protein [Bacillus pseudofirmus OF4]
Length = 423
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 173/311 (55%), Gaps = 31/311 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K K + T+ G G V+ + I E+ D + N L Q RNL
Sbjct: 44 VVGTITQKREKVESSTYVGKGKVQELVHLIEETEA----DLVIFNDELQASQMRNLHAEC 99
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR LI++IF + A ++E KLQ ELA L Y RL +G+
Sbjct: 100 GIAVIDRTQLILDIFASRAKSREGKLQVELAQLKYLLPRL--------------SGQGLA 145
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+S +G G G G GET+L+ RR I R + + Q+E V R R R+++
Sbjct: 146 LSRQGGGIGT----RGPGETQLETDRRHIRRRMNEIERQLEAVVNHRVRYREKRKKNAA- 200
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+A+VGYTNAGKSTL++ L+ +D + +LFATLDP + + LPSG VL+SDT
Sbjct: 201 -----IQLALVGYTNAGKSTLLNRLTKADTLEEDQLFATLDPTTRQLHLPSGFSVLMSDT 255
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI DLP LV +F +TLEE+ EADLL+HV+DC+ P+ E+H TV+++++++ E
Sbjct: 256 VGFIQDLPTTLVASFRSTLEELKEADLLLHVVDCSHPDYEQHERTVIKLIEEL---EAHS 312
Query: 413 KNMIEVWNKID 423
+ ++NK D
Sbjct: 313 IPQLLIYNKAD 323
>gi|51893261|ref|YP_075952.1| ATP/GTP-binding protein [Symbiobacterium thermophilum IAM 14863]
gi|51856950|dbj|BAD41108.1| ATP/GTP-binding protein [Symbiobacterium thermophilum IAM 14863]
Length = 464
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 169/301 (56%), Gaps = 32/301 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFV--NAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G E I+ + ELD FV + L+ +QQRNLE+ VLDR +I++
Sbjct: 100 TYIGRGKAEEIEL------LRRELDFDFVIFDDELTPVQQRNLEKIIECQVLDRTAVILD 153
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T+EAKLQ ELA L Y+ RL TG+ V +R GS G F
Sbjct: 154 IFALRARTREAKLQVELAQLGYRLPRL--------------TGKG-VELSRQAGSAGTVF 198
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GET+L++ RRRI +R + L ++EE++ R RA + VA+ GY
Sbjct: 199 NRGPGETKLEVDRRRIRDRMAALRRELEEIKAHRERLRAE------RRESAVPVVALTGY 252
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL L+ SD+ ++ RLFATLD + V G LL DTVGFI +LP LV
Sbjct: 253 TNAGKSTLHRVLAGSDVLAEDRLFATLDATTRRVQPAEGEPYLLVDTVGFIHNLPHHLVA 312
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF +TLEEV +ADLL+HV+D + P E TV +VL+++G + K + V+NKID
Sbjct: 313 AFRSTLEEVNQADLLLHVVDASHPKRAEQMATVHRVLEELGAGD---KPTLVVYNKIDRV 369
Query: 426 D 426
D
Sbjct: 370 D 370
>gi|303236066|ref|ZP_07322669.1| GTP-binding protein HflX [Prevotella disiens FB035-09AN]
gi|302483939|gb|EFL46931.1| GTP-binding protein HflX [Prevotella disiens FB035-09AN]
Length = 421
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 199/379 (52%), Gaps = 23/379 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + G ++ G G +E IK +I E + E + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVGGPNMTSYVGKGKLEEIKQYIKEKEDEEEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQLRNIEAELQVKILDRTSLILDIFAMRAQTASAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMTLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R L VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKVTQRKNRGR--------LIRVALVGYTNVGKSTIMNMLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VVL LL+DTVGFI LP LVD+F +TL+EV EADLLVHV+D + P+ EE
Sbjct: 255 RKVVL-ENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPDFEEQLQ 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPV 456
V + L+++ +++ +MI V+NKID + E + + + N S E K T +
Sbjct: 314 VVNETLKELECADK--PSMI-VFNKIDNYTWEEKEEDDLTPMTKENVSLEELKRTWMAKL 370
Query: 457 DVECIDNYGGDDADNNDGF 475
+ +C+ + +N D F
Sbjct: 371 NEDCL-FISAKEKENVDEF 388
>gi|340361956|ref|ZP_08684363.1| GTP-binding protein HflX [Neisseria macacae ATCC 33926]
gi|339888053|gb|EGQ77548.1| GTP-binding protein HflX [Neisseria macacae ATCC 33926]
Length = 396
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 177/323 (54%), Gaps = 39/323 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVE----TIKCHINGAESKGELDAIFVNAILSGIQQRNL 168
+V + K KA F G G E +K H G A+F N L+ Q+RNL
Sbjct: 59 LVLRETAKRDKAHTAYFVGTGKAEELAAAVKLHDIGL-------AVF-NHELTPTQERNL 110
Query: 169 ERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETG 228
E+ VLDRVGLI+ IF A ++E KLQ ELA L + RLVR G
Sbjct: 111 EKILQCRVLDRVGLILAIFAKRAQSQEGKLQVELAQLNHLSGRLVR-------------G 157
Query: 229 EAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR 288
+ S +G G G + G GET+L+ RR I ++ + L Q+ +V++ RA +R +R
Sbjct: 158 YGHLQSQKG-GIG----LKGPGETQLETDRRLIGQKITALKKQLVQVKKQRATRRKSR-- 210
Query: 289 HGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVL 348
+GR L T A+VGYTNAGKS+L + L+ +D+ + +LFATLD + + L V+
Sbjct: 211 ---MEGR-LKTFAIVGYTNAGKSSLFNRLTKADVLAKDQLFATLDTTARRLFLSQEAGVI 266
Query: 349 LSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS 408
L+DTVGF+ DLP +LV AF ATLEE AD+L+HV+D + P+ E V VL+++G
Sbjct: 267 LTDTVGFVRDLPHKLVSAFSATLEETALADVLLHVVDASNPDFERQMDDVNAVLEEIGAD 326
Query: 409 EEKLKNMIEVWNKIDYHDEEMGD 431
E + V+NKID E + D
Sbjct: 327 EVP---QLVVYNKIDLLPEGVRD 346
>gi|225012019|ref|ZP_03702456.1| GTP-binding proten HflX [Flavobacteria bacterium MS024-2A]
gi|225003574|gb|EEG41547.1| GTP-binding proten HflX [Flavobacteria bacterium MS024-2A]
Length = 402
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 195/364 (53%), Gaps = 36/364 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V+Q + K TF G G ++ + +N + ++ ++ + L+ QQ N+E+
Sbjct: 45 VMQRFTQKIDLPNPKTFIGSGKIQEVLEFVN----ENDISSVIFDDELTPAQQGNIEKTL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR GLI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 KVKILDRTGLILDIFAQRAQTSYARTQVELAQYEYLLPRL------KGLWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + ++ S L ++ + + A QR R
Sbjct: 149 -----RQRGGIG-MRGPGETEIETDRRIVRDKISLLKKKLINIDKQMATQRGNRG----- 197
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
L VA+VGYTN GKSTL++ ++ S++F++ +LFATLD ++ VV+ L+SDT
Sbjct: 198 ---ALVRVALVGYTNVGKSTLMNVVAKSNVFAENKLFATLDTTVRKVVI-GNLPFLMSDT 253
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI LP QLV++F +TL+EV EADLL+HV+D + PN E+H +V Q+L+++ +
Sbjct: 254 VGFIRKLPTQLVESFKSTLDEVQEADLLLHVVDISHPNFEDHIDSVNQILKEIKSLD--- 310
Query: 413 KNMIEVWNKID-YHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN 471
K + V+NKID Y E + E I+ + +FS E K T ++ + + + DN
Sbjct: 311 KPTLMVFNKIDVYQPEPWDETELIEQREEKHFSLEEWKQTWMHRMNGQAL-FISAINKDN 369
Query: 472 NDGF 475
+GF
Sbjct: 370 LEGF 373
>gi|335430176|ref|ZP_08557071.1| GTP-binding protein [Haloplasma contractile SSD-17B]
gi|334888592|gb|EGM26889.1| GTP-binding protein [Haloplasma contractile SSD-17B]
Length = 421
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 178/318 (55%), Gaps = 37/318 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + K + G G +E + + S ++ + N LS Q R +
Sbjct: 40 VVETMTQNLYKINNKYYMGKGKLEELANLV----SHIQVPIVIFNDELSPSQVRIISEYL 95
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
++DR LI++IFN+ A TKEAK+Q E+A L Y+ RLV GE +
Sbjct: 96 SCKIMDRTKLILDIFNSRAKTKEAKIQTEIALLEYRLPRLV--------------GEGDA 141
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+ R RG G GAGET+L+ RR+I +R L ++ +++ R R R++ S
Sbjct: 142 LD-RQRGGGVHN--KGAGETKLETDRRKISQRIKSLNIELSDIKTKRETTRKRRQK---S 195
Query: 293 DGRGLATVAVVGYTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGR 345
D L ++++GYTNAGKST+++AL + ++F LFATL+ ++++ L +
Sbjct: 196 D---LPIISLIGYTNAGKSTIMNALLELYHHNDNKEVFEKNMLFATLNTSIRNIKLHDNK 252
Query: 346 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 405
+ LL+DTVGFI LP Q+V+AF +TLEEV+ +DL++HV+DC+ PN +EH T VL ++
Sbjct: 253 EFLLTDTVGFIKKLPHQVVNAFRSTLEEVLHSDLILHVVDCSDPNHKEHMETTQNVLNEL 312
Query: 406 GVSEEKLKNMIEVWNKID 423
G ++ + I V+NK+D
Sbjct: 313 GYTDVPI---IMVYNKVD 327
>gi|299768754|ref|YP_003730780.1| GTP-binding proten HflX [Acinetobacter oleivorans DR1]
gi|298698842|gb|ADI89407.1| GTP-binding proten HflX [Acinetobacter oleivorans DR1]
Length = 447
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 181/318 (56%), Gaps = 35/318 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ ++ K F G G VE I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHIKVQRNKPNPKFFIGSGKVEEI------AERVQELEASLVIFDHALSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G + +
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GWSADF 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GET+L+ RR I R + L ++E+V +TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGETQLETDRRLIRVRIAQLKDKLEKVHQTRIQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
+ TV++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + V+L+
Sbjct: 197 ----AAIPTVSLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLA 252
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGF+ +L L+++F ATLEE +EA LL+HV+D + ++ + V VL+++G
Sbjct: 253 DTVGFVRNLQHDLIESFKATLEETLEATLLLHVIDSNSHDMLDQIEAVEGVLKEIGADAP 312
Query: 411 KLKNMIEVWNKIDYHDEE 428
L+ V+NKID EE
Sbjct: 313 VLR----VYNKIDLSGEE 326
>gi|225075097|ref|ZP_03718296.1| hypothetical protein NEIFLAOT_00096 [Neisseria flavescens
NRL30031/H210]
gi|224953581|gb|EEG34790.1| hypothetical protein NEIFLAOT_00096 [Neisseria flavescens
NRL30031/H210]
Length = 398
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 169/295 (57%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E + + + ++ + N L+ Q+RNLE+ VLDRVGLI+ IF
Sbjct: 87 FVGTGKAEELAAVVK----QHDVGLVVFNHELTPTQERNLEKELQCRVLDRVGLILAIFA 142
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A ++E KLQ ELA L + RLVR G + S +G G G + G
Sbjct: 143 KRAQSQEGKLQVELAQLNHLSGRLVR-------------GYGHLQSQKG-GIG----LKG 184
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I ++ + L Q+ +VR+ RA +R +R GR L T A+VGYTNA
Sbjct: 185 PGETQLETDRRLIGQKITALKKQLADVRKQRATRRKSR-----MSGR-LKTFAIVGYTNA 238
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKS+L + L+ +D+ + +LFATLD + + L V+L+DTVGF+ DLP +LV AF
Sbjct: 239 GKSSLFNRLTKADVLAKDQLFATLDTTARRLFLSHEASVILTDTVGFVRDLPHKLVSAFS 298
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEE AD+L+HV+D + P+ E V +VL+++G E + ++ V+NKID
Sbjct: 299 ATLEETAMADVLLHVVDASNPDFERQMDDVNEVLEEIGAHE--IPQLV-VYNKID 350
>gi|295676897|ref|YP_003605421.1| GTP-binding proten HflX [Burkholderia sp. CCGE1002]
gi|295436740|gb|ADG15910.1| GTP-binding proten HflX [Burkholderia sp. CCGE1002]
Length = 404
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 180/335 (53%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLERA + V+DR LI
Sbjct: 61 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLERALNRRVVDRTSLI 114
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 115 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L +++++RR QR AR R+ +V++V
Sbjct: 158 G-LRGPGETQLETDRRLIGERIKALKIRLDKLRRQHGTQRRARSRN------QTMSVSLV 210
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +V++SDTVGFI +LP Q
Sbjct: 211 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 270
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 271 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 327
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E + ++ D+ N SR T + +D
Sbjct: 328 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLD 362
>gi|52143583|ref|YP_083245.1| GTP-binding protein [Bacillus cereus E33L]
gi|196041267|ref|ZP_03108562.1| GTP-binding protein [Bacillus cereus NVH0597-99]
gi|228926874|ref|ZP_04089940.1| hypothetical protein bthur0010_15900 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229090841|ref|ZP_04222069.1| hypothetical protein bcere0021_16620 [Bacillus cereus Rock3-42]
gi|51977052|gb|AAU18602.1| GTP-binding protein [Bacillus cereus E33L]
gi|196027975|gb|EDX66587.1| GTP-binding protein [Bacillus cereus NVH0597-99]
gi|228692450|gb|EEL46181.1| hypothetical protein bcere0021_16620 [Bacillus cereus Rock3-42]
gi|228832609|gb|EEM78180.1| hypothetical protein bthur0010_15900 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 419
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + +IN ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYINEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------IPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|325270195|ref|ZP_08136802.1| GTP-binding protein HflX [Prevotella multiformis DSM 16608]
gi|324987496|gb|EGC19472.1| GTP-binding protein HflX [Prevotella multiformis DSM 16608]
Length = 415
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 181/330 (54%), Gaps = 23/330 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + A T+ G G +E IK +I E + + + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRLNGPSAVTYVGKGKLEEIKEYIQQKEDEDDPVGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E G +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIEHELGVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQRLVEIE 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ ++ QR R R L VA+VGYTN GKST ++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKSTQRKNRGR--------LIRVALVGYTNVGKSTTMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+H++D + P+ EE
Sbjct: 255 RKVVV-ENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDFEEQIQ 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKID-YH 425
V + L +G +++ +MI V+NKID YH
Sbjct: 314 VVNKTLADLGCADK--PSMI-VFNKIDNYH 340
>gi|326384487|ref|ZP_08206167.1| GTP-binding proten HflX [Gordonia neofelifaecis NRRL B-59395]
gi|326196832|gb|EGD54026.1| GTP-binding proten HflX [Gordonia neofelifaecis NRRL B-59395]
Length = 499
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 168/302 (55%), Gaps = 26/302 (8%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G E ++ + + D + + L+ Q LE+ V+DR LI++IF
Sbjct: 126 TYLGSGKAEELREVVLATGA----DTVICDGELTPAQLTALEKVVKVKVIDRTALILDIF 181
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR-GSGGRGFI 246
HA ++E K Q LA + Y L R+RG GE+ A GR GS G +
Sbjct: 182 AQHATSREGKAQVALAQMEYM---LPRLRG---------WGESMSRQAGGRAGSNGGVGL 229
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+++ RRRI ER + L +I ++ R+V+RAARRR G + + VVGYT
Sbjct: 230 RGPGETKIETDRRRIRERMAKLRKEIRGMKTARSVKRAARRRGG------VPALTVVGYT 283
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDA 366
NAGKS+LV+A++ S + LFATLDP + L G +V+ +DTVGF+ LP QLV+A
Sbjct: 284 NAGKSSLVNAMTGSGVLVQDALFATLDPTTRRAQLADGHEVVFTDTVGFVRHLPTQLVEA 343
Query: 367 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE--VWNKIDY 424
F +TLEE V+ADLLVHV+D P + V QVL V ++EEK E V NKID
Sbjct: 344 FRSTLEEAVDADLLVHVVDGADPFPANQISAVRQVLGDV-LAEEKRPAPPEMLVINKIDA 402
Query: 425 HD 426
D
Sbjct: 403 VD 404
>gi|229121423|ref|ZP_04250650.1| hypothetical protein bcere0016_17270 [Bacillus cereus 95/8201]
gi|228661887|gb|EEL17500.1| hypothetical protein bcere0016_17270 [Bacillus cereus 95/8201]
Length = 419
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + +IN ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYINEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------IPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|358067190|ref|ZP_09153672.1| GTP-binding protein HflX [Johnsonella ignava ATCC 51276]
gi|356694614|gb|EHI56273.1| GTP-binding protein HflX [Johnsonella ignava ATCC 51276]
Length = 429
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 166/298 (55%), Gaps = 37/298 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G ++ +K I ELDA + + LS Q +NLE V+DR LI++
Sbjct: 69 TYIGKGKLDELKLAI------FELDATGVICDDELSPAQLKNLENELEIKVMDRTLLILD 122
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E K+Q ELA L Y +RL +R RL G
Sbjct: 123 IFAQRASTSEGKIQVELAQLKYLSARLAGMRASLSRLGGGIGTRG--------------- 167
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE ++ + +R I R L +Q++E+++ R + R R+ + T A+ GY
Sbjct: 168 ---PGEKKIDIDKRIIHNRIGILKAQLQEIKKHREITRKTRK--------NIVTAAIWGY 216
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL++AL+DSD+F + +LFATLDP + V L SG+++L++DTVGFI LP L++
Sbjct: 217 TNAGKSTLLNALADSDVFVENKLFATLDPSTRRVKLKSGQEILVTDTVGFIRKLPHNLIE 276
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF +T EE AD+++H++D + P +EH V + L+ +S+ K++I V+NKID
Sbjct: 277 AFRSTFEEAAYADIIIHLVDASNPAADEHMLVVYEALKSFDISD---KDIITVYNKID 331
>gi|377820984|ref|YP_004977355.1| GTP-binding proten HflX [Burkholderia sp. YI23]
gi|357935819|gb|AET89378.1| GTP-binding proten HflX [Burkholderia sp. YI23]
Length = 422
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 184/333 (55%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G VE ++ ++ ++ + N L+ QQRNLE A + V+DR LI++
Sbjct: 47 AKMFIGSGKVEELRLQCEASD----VELVIFNHALAPAQQRNLEVALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S++E++RR QR R R+ R + +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKALKSRLEKLRRQHGTQRRQRVRN-----RTM-SVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L V++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVFLGEEAGHVVVSDTVGFIRELPHQLV 258
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + AD+L+HV+D ++ + V +VL+ G+ + ++ ++ V+NKID
Sbjct: 259 AAFRATLEETIHADVLLHVVDASSAVRLDQIDQVNEVLR--GIGADGIRQIL-VFNKIDA 315
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E E ++ D+ N SR T + +D
Sbjct: 316 VPELAARGEAVERDEYGNISRVFLSARTGQGLD 348
>gi|340349247|ref|ZP_08672268.1| GTP-binding protein HflX [Prevotella nigrescens ATCC 33563]
gi|339612334|gb|EGQ17146.1| GTP-binding protein HflX [Prevotella nigrescens ATCC 33563]
Length = 420
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 201/385 (52%), Gaps = 35/385 (9%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F V V+ + + G ++ G G + IK +I E + E + +
Sbjct: 32 YLDELEFLAHTAGAVTVKRFTQRVGGPNMTSYVGKGKLAEIKEYIKTKEDEDEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQLRNIENELQVKILDRTSLILDIFAMRAQTSNAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMTLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR RRR L VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKITQRKNRRR--------LIRVALVGYTNVGKSTIMNMLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VVL + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVLLN-LPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIQ 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKID-YHDEEMGDVEYIDGDDIS-----NFSRAEDKD 450
V + L+ + +E+ +MI ++NKID Y EE D DD++ N S E K
Sbjct: 314 VVTETLKDLECAEK--PSMI-IFNKIDNYTWEEKED------DDLTPMTKKNVSLEELKR 364
Query: 451 TTSEPVDVECIDNYGGDDADNNDGF 475
T ++ +C+ + +N D F
Sbjct: 365 TWMAKLNDDCL-FISAKEKENIDEF 388
>gi|319637675|ref|ZP_07992441.1| GTP-binding protein [Neisseria mucosa C102]
gi|317400830|gb|EFV81485.1| GTP-binding protein [Neisseria mucosa C102]
Length = 386
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 169/295 (57%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E + + + ++ + N L+ Q+RNLE+ VLDRVGLI+ IF
Sbjct: 75 FVGTGKAEELAAVVK----QHDVGLVVFNHELTPTQERNLEKELQCRVLDRVGLILAIFA 130
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A ++E KLQ ELA L + RLVR G + S +G G G + G
Sbjct: 131 KRAQSQEGKLQVELAQLNHLSGRLVR-------------GYGHLQSQKG-GIG----LKG 172
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I ++ + L Q+ +VR+ RA +R +R GR L T A+VGYTNA
Sbjct: 173 PGETQLETDRRLIGQKITALKKQLADVRKQRATRRKSR-----MSGR-LKTFAIVGYTNA 226
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKS+L + L+ +D+ + +LFATLD + + L V+L+DTVGF+ DLP +LV AF
Sbjct: 227 GKSSLFNRLTKADVLAKDQLFATLDTTARRLFLSHEASVILTDTVGFVRDLPHKLVSAFS 286
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEE AD+L+HV+D + P+ E V +VL+++G E + ++ V+NKID
Sbjct: 287 ATLEETAMADVLLHVVDASNPDFERQMDDVNEVLEEIGAHE--IPQLV-VYNKID 338
>gi|299141395|ref|ZP_07034532.1| GTP-binding protein HflX [Prevotella oris C735]
gi|298577355|gb|EFI49224.1| GTP-binding protein HflX [Prevotella oris C735]
Length = 415
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 184/343 (53%), Gaps = 23/343 (6%)
Query: 85 LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHING 144
L N E + Y D F + V V+ + K+ A T+ G G +E IK +I
Sbjct: 19 LITNNQSEAKTKEYLDELEFLADTAGAVTVKRFTQKANGPSAVTYVGKGKLEEIKNYIET 78
Query: 145 AESKGE-LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
E E + + + LS Q RN+E +LDR LI++IF A T AK Q ELA
Sbjct: 79 CEENEEPIGMVIFDDELSAKQIRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELA 138
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL R+ E + + G G + G GET+L++ RR IL+
Sbjct: 139 QYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQ 189
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R + L ++ E+ + + QR R R + VA+VGYTN GKST+++ L+ S++F
Sbjct: 190 RITLLKQRLVEIDKQKVTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVF 241
Query: 324 SDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 383
++ +LFATLD ++ VV+ LL+DTVGFI LP LVD+F +TL+EV EAD+L+HV
Sbjct: 242 AENKLFATLDTTVRKVVV-DNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADVLLHV 300
Query: 384 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 425
+D + P+ EE V + L +G S++ +MI ++NKID YH
Sbjct: 301 VDISHPDFEEQIQVVEKTLADLGCSDK--PSMI-IFNKIDNYH 340
>gi|255534186|ref|YP_003094557.1| GTP-binding protein HflX [Flavobacteriaceae bacterium 3519-10]
gi|255340382|gb|ACU06495.1| GTP-binding protein HflX [Flavobacteriaceae bacterium 3519-10]
Length = 403
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 181/343 (52%), Gaps = 34/343 (9%)
Query: 89 NSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESK 148
N EE+ Y D F VV+ + K + TF G G + ++ +I +
Sbjct: 21 NQDEEKLVEYMDELEFLALTAGATVVKRFTQKLTQPDPKTFIGSGKAQEVRDYI----KE 76
Query: 149 GELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYK 208
++ + + LS Q +NLER +LDR LI++IF A T A+ Q ELA Y
Sbjct: 77 NDIGTVIFDDELSPSQLKNLEREIEVKILDRTNLILDIFAQRAQTSYARTQVELAQYQYL 136
Query: 209 KSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHL 268
RL R+ + R GG G + G GETE++ RR I +R S L
Sbjct: 137 LPRLTRMW-----------------THLERQKGGIG-MRGPGETEIETDRRIIRDRISLL 178
Query: 269 LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARL 328
+++ + R A QR R + + A+VGYTN GKSTL++A+S SD+F++ +L
Sbjct: 179 KEKLKTIDRQMATQRNNRGK--------VVRAALVGYTNVGKSTLMNAISKSDVFAENKL 230
Query: 329 FATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTA 388
FATLD ++ VV+ LL+DTVGFI LP QLV++F +TL+EV EADLL+HV+D +
Sbjct: 231 FATLDTTVRKVVI-GNLPFLLTDTVGFIRKLPTQLVESFKSTLDEVREADLLIHVVDISH 289
Query: 389 PNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGD 431
+ E+H +V Q+L ++ + K MI V+NKID E D
Sbjct: 290 ESFEDHIDSVNQILMEINAHQ---KPMIMVFNKIDDFSYEKKD 329
>gi|423545132|ref|ZP_17521490.1| GTP-binding protein HflX [Bacillus cereus HuB5-5]
gi|423625156|ref|ZP_17600934.1| GTP-binding protein HflX [Bacillus cereus VD148]
gi|401183307|gb|EJQ90424.1| GTP-binding protein HflX [Bacillus cereus HuB5-5]
gi|401254836|gb|EJR61061.1| GTP-binding protein HflX [Bacillus cereus VD148]
Length = 419
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMIDVEIPKVQ 337
>gi|209521121|ref|ZP_03269849.1| GTP-binding proten HflX [Burkholderia sp. H160]
gi|209498431|gb|EDZ98558.1| GTP-binding proten HflX [Burkholderia sp. H160]
Length = 395
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 179/335 (53%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLERA + V+DR LI
Sbjct: 52 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLERALNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L +++++RR QR AR R+ +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKALKIRLDKLRRQHGTQRRARNRNQT------MSVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +V++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 261
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 318
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E ++ D+ N SR T + +D
Sbjct: 319 DAVPELAARGHAVERDEYGNISRVFLSARTGQGLD 353
>gi|218902989|ref|YP_002450823.1| GTP-binding protein [Bacillus cereus AH820]
gi|218534958|gb|ACK87356.1| GTP-binding protein [Bacillus cereus AH820]
Length = 419
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 170/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + +IN + + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYINEVNA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------IPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|315641408|ref|ZP_07896482.1| GTP-binding protein HflX [Enterococcus italicus DSM 15952]
gi|315482844|gb|EFU73366.1| GTP-binding protein HflX [Enterococcus italicus DSM 15952]
Length = 407
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 170/298 (57%), Gaps = 35/298 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
+ G G ++ + ++ E +D + N LS QQ+ + + G VLDRV LI++IF
Sbjct: 54 SLIGKGKLQELHQWVDAEE----IDVVIFNQELSPRQQQIISQELGVLVLDRVQLILDIF 109
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KE KLQ ELA L Y RLV G+ +S G G G RG
Sbjct: 110 ALRARSKEGKLQVELAQLNYLLPRLV--------------GQGTSMSRLGAGIGTRG--- 152
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR I +R + + ++++V R R+ R++ + ++GYTN
Sbjct: 153 -PGETKLETDRRHIRDRIAKIKRELKQVAAHRERTRSRRKQQAT------VQIGLIGYTN 205
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
AGKST+++ L+ +D + +LFATLDP K L G V L+DTVGFI +LP QLVDAF
Sbjct: 206 AGKSTVLNRLTAADTYEQDQLFATLDPLTKKWRLTEGLTVTLTDTVGFIQELPTQLVDAF 265
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEVWNKID 423
H+TLEE + D+L+HV+D ++P+ +H TVLQ+++++ +L+N+ + ++NK D
Sbjct: 266 HSTLEESKDMDILLHVVDASSPDRTQHEATVLQLMKEL-----ELENIPTLTIYNKAD 318
>gi|150004409|ref|YP_001299153.1| GTP-binding protein [Bacteroides vulgatus ATCC 8482]
gi|294775484|ref|ZP_06740996.1| GTP-binding protein HflX [Bacteroides vulgatus PC510]
gi|319643373|ref|ZP_07997999.1| hypothetical protein HMPREF9011_03600 [Bacteroides sp. 3_1_40A]
gi|345519737|ref|ZP_08799151.1| GTP-binding protein HflX [Bacteroides sp. 4_3_47FAA]
gi|423312592|ref|ZP_17290529.1| GTP-binding protein HflX [Bacteroides vulgatus CL09T03C04]
gi|149932833|gb|ABR39531.1| putative GTP-binding protein [Bacteroides vulgatus ATCC 8482]
gi|254835659|gb|EET15968.1| GTP-binding protein HflX [Bacteroides sp. 4_3_47FAA]
gi|294450629|gb|EFG19117.1| GTP-binding protein HflX [Bacteroides vulgatus PC510]
gi|317385002|gb|EFV65955.1| hypothetical protein HMPREF9011_03600 [Bacteroides sp. 3_1_40A]
gi|392688280|gb|EIY81569.1| GTP-binding protein HflX [Bacteroides vulgatus CL09T03C04]
Length = 417
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 181/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + Y D F E VV+ + K A + T+ G G +E IK +I+ E ++ E
Sbjct: 26 ERKTKEYLDELEFLAETAGATVVKRFTQKLPAANSVTYVGKGKLEEIKEYIHQEEENERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTLMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+
Sbjct: 249 TLDTTVRKVII-ENLPFLLTDTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE + V + + +G K + V+NKID +
Sbjct: 308 FEEQISVVDKTIADLGAGG---KPTMIVFNKIDAY 339
>gi|448820462|ref|YP_007413624.1| GTPase HflX [Lactobacillus plantarum ZJ316]
gi|448273959|gb|AGE38478.1| GTPase HflX [Lactobacillus plantarum ZJ316]
Length = 431
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 167/303 (55%), Gaps = 30/303 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TFFG G V IK + +L + +NA L+ Q RNLE ++DR GLI+EIF
Sbjct: 57 TFFGKGKVVEIK----EVAAANDLHIMVINADLTPSQVRNLEEQTDIQIIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL R + + + +A G G G
Sbjct: 113 GNRARSKEAKLQVKIAQLQYQLPRL--------RTSISNRLDQQAGAAAGGGGGFTN--R 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR I +R SH +++E+ + V+R+ R D L VA+VGYTN
Sbjct: 163 GAGETQLELNRRTIQDRISHAKHELKELNKDEVVRRSQR------DKAVLPNVALVGYTN 216
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKS ++ L D +F LFATLD ++ + P +++LLSDTVGF+SDLP
Sbjct: 217 AGKSATMNGLVKLFGKGEDKQVFEKDMLFATLDTSIRQLTFPDNKQLLLSDTVGFVSDLP 276
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
L++AF +TL E ADLL+ V+D P+ +E T + L+++GV + MI +N
Sbjct: 277 HNLINAFRSTLAEAANADLLIQVIDYADPHYKEMMATTEKTLKEIGVHDVP---MIYAFN 333
Query: 421 KID 423
K D
Sbjct: 334 KAD 336
>gi|421876110|ref|ZP_16307670.1| GTP-binding protein HflX [Leuconostoc citreum LBAE C10]
gi|372558145|emb|CCF23790.1| GTP-binding protein HflX [Leuconostoc citreum LBAE C10]
Length = 432
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 181/333 (54%), Gaps = 50/333 (15%)
Query: 107 ELPPHVVVQNPSLKSGKARADTFFGPGTV----ETIKCHINGAESKGELDAIFVNAILSG 162
+L P ++ S K + T+FG G V E +K + ++D I N LS
Sbjct: 41 QLIPEIIF---SQKLERPNPATYFGKGKVDELAEAVKTY--------DVDMIVANDELSP 89
Query: 163 IQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRL 222
Q RNLE+ VLDR GLI++IF A TK AKLQ +LA L Y+ RL R
Sbjct: 90 SQIRNLEKVTQATVLDRTGLILDIFAQRAQTKAAKLQVQLARLQYQLPRL--------RT 141
Query: 223 TFGETGEAEVVSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAV 281
+ + + + G+GG GF S G+GET+L+ RRRI + H+ ++ ++ +
Sbjct: 142 SMSVSLDQQT------GAGGGGFTSRGSGETKLEESRRRITSQMVHIRQELADLSKGEDT 195
Query: 282 QRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL-------SDSD----LFSDARLFA 330
R+ARR L VA+VGYTNAGKSTL++ L ++SD +F LFA
Sbjct: 196 -RSARR-----TANNLPNVALVGYTNAGKSTLMNRLLARFGIGAESDDTKQVFEKDMLFA 249
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TL+ ++ + LP + LLSDTVGF+S LP LV AF +TL+E +ADLL+ V+D + P+
Sbjct: 250 TLNTTVRQLTLPDKTQFLLSDTVGFVSKLPHNLVAAFKSTLQEAAQADLLLQVVDISDPH 309
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
++ TT L++VGV+ M+ V+NK D
Sbjct: 310 YKDMMTTTENTLREVGVTNIP---MVTVYNKAD 339
>gi|229096353|ref|ZP_04227326.1| hypothetical protein bcere0020_16020 [Bacillus cereus Rock3-29]
gi|229115307|ref|ZP_04244716.1| hypothetical protein bcere0017_16030 [Bacillus cereus Rock1-3]
gi|423380339|ref|ZP_17357623.1| GTP-binding protein HflX [Bacillus cereus BAG1O-2]
gi|423443369|ref|ZP_17420275.1| GTP-binding protein HflX [Bacillus cereus BAG4X2-1]
gi|423446379|ref|ZP_17423258.1| GTP-binding protein HflX [Bacillus cereus BAG5O-1]
gi|423466459|ref|ZP_17443227.1| GTP-binding protein HflX [Bacillus cereus BAG6O-1]
gi|423535857|ref|ZP_17512275.1| GTP-binding protein HflX [Bacillus cereus HuB2-9]
gi|423538898|ref|ZP_17515289.1| GTP-binding protein HflX [Bacillus cereus HuB4-10]
gi|228668139|gb|EEL23572.1| hypothetical protein bcere0017_16030 [Bacillus cereus Rock1-3]
gi|228687313|gb|EEL41218.1| hypothetical protein bcere0020_16020 [Bacillus cereus Rock3-29]
gi|401132459|gb|EJQ40101.1| GTP-binding protein HflX [Bacillus cereus BAG5O-1]
gi|401177482|gb|EJQ84674.1| GTP-binding protein HflX [Bacillus cereus HuB4-10]
gi|401631091|gb|EJS48888.1| GTP-binding protein HflX [Bacillus cereus BAG1O-2]
gi|402412455|gb|EJV44808.1| GTP-binding protein HflX [Bacillus cereus BAG4X2-1]
gi|402415169|gb|EJV47493.1| GTP-binding protein HflX [Bacillus cereus BAG6O-1]
gi|402461282|gb|EJV92995.1| GTP-binding protein HflX [Bacillus cereus HuB2-9]
Length = 419
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/315 (37%), Positives = 172/315 (54%), Gaps = 42/315 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEV 418
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV +N+ I
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV-----ENIPTIYA 322
Query: 419 WNKIDYHDEEMGDVE 433
+NK D D E+ V+
Sbjct: 323 YNKSDMIDVEIPKVQ 337
>gi|374317039|ref|YP_005063467.1| GTP-binding protein HflX [Sphaerochaeta pleomorpha str. Grapes]
gi|359352683|gb|AEV30457.1| GTP-binding protein HflX [Sphaerochaeta pleomorpha str. Grapes]
Length = 450
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 182/324 (56%), Gaps = 36/324 (11%)
Query: 106 KELPPHVVVQNPSLKSG------KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAI 159
+EL V PS+ S +A + T G G V+ IK I+ D I +
Sbjct: 49 EELSSLVETMGPSVISTTYIPLREANSATLIGSGKVQEIKALIDQQSP----DLIIFDHS 104
Query: 160 LSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPD 219
L+ QRNLE+ + V+DR +I++IF A TKE+ LQ ELA L Y RL R
Sbjct: 105 LNPRVQRNLEKEFDCCVIDRDEVILQIFADRAATKESVLQVELARLEYSLPRLSR----- 159
Query: 220 GRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTR 279
A + RG G +G GET+L+L R+I ++ L +Q+++V++ R
Sbjct: 160 --------RWANLSQQRGGVKGSKG----EGETQLELDHRQIKDKIVLLKTQLKKVQQQR 207
Query: 280 AVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSV 339
+QR +R G+ G A+VGYTN+GKS+L++ALS++ + + +LFATLDP + V
Sbjct: 208 TIQR--NQRMNGNVPMG----AIVGYTNSGKSSLLNALSNAGVLVENKLFATLDPTTRMV 261
Query: 340 VLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVL 399
LP G ++LLSDTVGF+SDLP LVD+F +TLEE AD L+ V D + P++ T +
Sbjct: 262 KLPGGEEILLSDTVGFVSDLPHNLVDSFKSTLEEAKYADFLIIVCDASHPDMINCYKTTV 321
Query: 400 QVLQQVGVSEEKLKNMIEVWNKID 423
+VL+++G ++ K I + NK+D
Sbjct: 322 KVLEELGCTD---KPAIVMINKMD 342
>gi|117919051|ref|YP_868243.1| HSR1-like GTP-binding protein [Shewanella sp. ANA-3]
gi|117611383|gb|ABK46837.1| GTP-binding protein, HSR1-related [Shewanella sp. ANA-3]
Length = 435
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 165/285 (57%), Gaps = 28/285 (9%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
E + + N LS Q+RNLE+ VLDR LI++IF A T E KLQ ELA L +
Sbjct: 74 EANVVIFNHALSPAQERNLEQVCQCRVLDRTTLILDIFAQRARTHEGKLQVELAQLRHMS 133
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
+RLVR G T R GG G + G GET+L+ RR + R ++
Sbjct: 134 TRLVR----------GWTHLE-------RQKGGIG-LRGPGETQLETDRRLLRGRIKNIN 175
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
++E V + R R AR+R SD + TV++VGYTNAGKSTL +AL+ SD+++ +LF
Sbjct: 176 KRLERVDKQREQSRRARKR---SD---MPTVSLVGYTNAGKSTLFNALTSSDVYAADQLF 229
Query: 330 ATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 389
ATLDP L+ + LP G V+L+DTVGFI LP LV AF ATL+E +ADLL+H++DC
Sbjct: 230 ATLDPTLRKLDLPDG-AVILADTVGFIRHLPHDLVAAFKATLQETRQADLLLHIVDCADE 288
Query: 390 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEY 434
N+ ++ V VL+ + +E + V NKID ++ +EY
Sbjct: 289 NMADNFEQVQNVLEDIDAAEVM---QLVVCNKIDLLEDVTPRIEY 330
>gi|406938225|gb|EKD71505.1| hypothetical protein ACD_46C00177G0003 [uncultured bacterium]
Length = 416
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 167/295 (56%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I+ + ++K + N +L+ Q+RNLER VLDR GLI++IF
Sbjct: 57 FVGSGKAEEIRDAVITHQAK----LVIFNHVLTPAQERNLERLISCRVLDRTGLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + +RL+R G + RG G G RG
Sbjct: 113 QRARSFEGKLQVELALLKHLSTRLIR-------------GWTHLERQRG-GIGLRG---- 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I ++ + +++ ++RR R R ARR+ + TVA+VGYTNA
Sbjct: 155 PGETQLEVDRRLIRQKIKLISARLAKIRRQREQSRRARRKAI------IPTVALVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ + +++ +LFATLDP L+ V LP V+ +DTVGFI LP L++AF
Sbjct: 209 GKSTLFNRLTGASIYAANQLFATLDPTLRRVELPEIGPVIFADTVGFIRHLPHDLIEAFQ 268
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
ATLEEV EADLL+HV+D + ++ V QVL + + + I V NKID
Sbjct: 269 ATLEEVTEADLLLHVIDAHQDDKDQQMEQVNQVLDTINAQDVPI---ILVHNKID 320
>gi|423617994|ref|ZP_17593828.1| GTP-binding protein HflX [Bacillus cereus VD115]
gi|401253725|gb|EJR59961.1| GTP-binding protein HflX [Bacillus cereus VD115]
Length = 419
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMIDVEIPKVQ 337
>gi|374595907|ref|ZP_09668911.1| GTP-binding protein HflX [Gillisia limnaea DSM 15749]
gi|373870546|gb|EHQ02544.1| GTP-binding protein HflX [Gillisia limnaea DSM 15749]
Length = 406
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 173/316 (54%), Gaps = 34/316 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V++ + K K TF G G + +K I+ + AIF + LS QQ+N+E+
Sbjct: 45 VLKRFTQKMEKPDPKTFMGSGKILEVKAFIDEHDVGT---AIFDDE-LSPAQQKNIEKVL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 NVKILDRTNLILDIFAQRAQTSYARKQVELAQYQYLLPRLA------GMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + ++ S L +IE + + VQR R +
Sbjct: 149 -----RQRGGIG-MRGPGETEIETDRRIVRDKISLLKKKIETIDKQMEVQRGNRGQ---- 198
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
L VA+VGYTN GKSTL++ +S S++F++ +LFATLD ++ VV+ LL+DT
Sbjct: 199 ----LVRVALVGYTNVGKSTLMNLISKSEVFAENKLFATLDTTVRKVVI-RNLPFLLTDT 253
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI LP QL+++F +TL+EV EADLL+H++D + PN EEH +V Q L + +
Sbjct: 254 VGFIRKLPTQLIESFKSTLDEVREADLLLHIVDISHPNFEEHIASVNQTLADIKSAN--- 310
Query: 413 KNMIEVWNKIDYHDEE 428
K I V+NKID + E
Sbjct: 311 KPTIMVFNKIDAYTAE 326
>gi|229102463|ref|ZP_04233170.1| hypothetical protein bcere0019_16240 [Bacillus cereus Rock3-28]
gi|228680948|gb|EEL35118.1| hypothetical protein bcere0019_16240 [Bacillus cereus Rock3-28]
Length = 419
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 117/315 (37%), Positives = 172/315 (54%), Gaps = 42/315 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEV 418
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV +N+ I
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV-----ENIPTIYA 322
Query: 419 WNKIDYHDEEMGDVE 433
+NK D D E+ V+
Sbjct: 323 YNKSDMIDVEIPKVQ 337
>gi|212550977|ref|YP_002309294.1| GTP-binding protein HflX [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549215|dbj|BAG83883.1| GTP-binding protein HflX [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 408
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 186/344 (54%), Gaps = 44/344 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
+F G G + IK +K +D + + L+ Q RNLE ++DR LI++IF
Sbjct: 53 SFVGSGKLLEIKDFTENKNNK--IDIVIFDDELTTKQLRNLETILKVKIMDRTSLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T AK Q ELA Y RL + + R SGG +
Sbjct: 111 ASRAQTAHAKKQVELAQYNYMLPRL-----------------THLWTHLERQSGGFR-MR 152
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR IL + HL +++++ + + VQR+ R R + VA+VGYTN
Sbjct: 153 GPGETQLETDRRIILNKIIHLKKELKKIDKQKVVQRSNRGR--------MVRVALVGYTN 204
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL+S LS SD+F++ +LFAT+D ++ V + + LL+DTVGFI LP +L+++F
Sbjct: 205 VGKSTLMSLLSKSDIFTENKLFATIDTTVRKVTI-NNLVFLLTDTVGFIRKLPTELIESF 263
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL+EV EADLL+H++D + P+ EE V+Q L + +++EK K I V+NKID
Sbjct: 264 KSTLDEVREADLLIHIVDISHPSFEEQVKVVIQTLNE--INKEK-KPYIVVFNKID---- 316
Query: 428 EMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN 471
+ +I GD SR D + P+D E +GG +N
Sbjct: 317 ---ALLHITGDKNDLISR----DQANVPLD-ELKKTWGGKLHEN 352
>gi|170017909|ref|YP_001728828.1| GTPase [Leuconostoc citreum KM20]
gi|414596263|ref|ZP_11445839.1| GTP-binding protein HflX [Leuconostoc citreum LBAE E16]
gi|421878489|ref|ZP_16309969.1| GTP-binding protein HflX [Leuconostoc citreum LBAE C11]
gi|169804766|gb|ACA83384.1| GTPase [Leuconostoc citreum KM20]
gi|390447616|emb|CCF26089.1| GTP-binding protein HflX [Leuconostoc citreum LBAE C11]
gi|390483196|emb|CCF27900.1| GTP-binding protein HflX [Leuconostoc citreum LBAE E16]
Length = 432
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 181/333 (54%), Gaps = 50/333 (15%)
Query: 107 ELPPHVVVQNPSLKSGKARADTFFGPGTV----ETIKCHINGAESKGELDAIFVNAILSG 162
+L P ++ S K + T+FG G V E +K + ++D I N LS
Sbjct: 41 QLIPEIIF---SQKLERPNPATYFGKGKVDELAEAVKTY--------DVDMIVANDELSP 89
Query: 163 IQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRL 222
Q RNLE+ VLDR GLI++IF A TK AKLQ +LA L Y+ RL R
Sbjct: 90 SQIRNLEKVTQATVLDRTGLILDIFAQRAQTKAAKLQVQLARLQYQLPRL--------RT 141
Query: 223 TFGETGEAEVVSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAV 281
+ + + + G+GG GF S G+GET+L+ RRRI + H+ ++ ++ +
Sbjct: 142 SMSVSLDQQT------GAGGGGFTSRGSGETKLEESRRRITSQMVHIRQELADLSKGEDT 195
Query: 282 QRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL-------SDSD----LFSDARLFA 330
R+ARR L VA+VGYTNAGKSTL++ L ++SD +F LFA
Sbjct: 196 -RSARR-----TANNLPNVALVGYTNAGKSTLMNRLLARFGIGAESDDTKQVFEKDMLFA 249
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TL+ ++ + LP + LLSDTVGF+S LP LV AF +TL+E +ADLL+ V+D + P+
Sbjct: 250 TLNTTVRQLTLPDKTQFLLSDTVGFVSKLPHNLVAAFKSTLQEAAQADLLLQVVDISDPH 309
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
++ TT L++VGV+ M+ V+NK D
Sbjct: 310 YKDMMTTTENTLREVGVTNIP---MVTVYNKAD 339
>gi|449124763|ref|ZP_21761081.1| GTP-binding protein HflX [Treponema denticola OTK]
gi|449129761|ref|ZP_21765990.1| GTP-binding protein HflX [Treponema denticola SP37]
gi|448941305|gb|EMB22207.1| GTP-binding protein HflX [Treponema denticola OTK]
gi|448945251|gb|EMB26125.1| GTP-binding protein HflX [Treponema denticola SP37]
Length = 391
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 130/328 (39%), Positives = 174/328 (53%), Gaps = 35/328 (10%)
Query: 105 DKELPPHV--VVQNP----SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNA 158
+KEL V + NP + K T G G +E I I E +G D + N+
Sbjct: 46 EKELKSLVETIFLNPLSSLRFRIAKENPATLVGSGQLEKIAQAI---EEEGA-DLVVFNS 101
Query: 159 ILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGP 218
+S QRNLE A V+DR +II+IF A T+EA LQAELA L Y RL R
Sbjct: 102 AVSPRIQRNLEAALNTCVIDRSEVIIQIFADRAQTREAVLQAELARLEYSMPRLTR---- 157
Query: 219 DGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRT 278
R T + RG G RG GAGE +L+L RRR+ + L ++E VR
Sbjct: 158 --RWT-------SLAQQRGGAKGTRGASRGAGEKKLELDRRRLKTEIAKLKKEVERVRLQ 208
Query: 279 RAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKS 338
R+ QR + R G G A+VGYTNAGKS+L+ LS +++F++ +LFATLD +
Sbjct: 209 RSEQR--KTRLNGDKKIG----AIVGYTNAGKSSLLKKLSGAEVFTEDKLFATLDAETRK 262
Query: 339 VVLPSGRK---VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHR 395
V L +G K +LL+DTVGF+S+LP QL+DAF +TLEE AD L+ V D P + E
Sbjct: 263 VFLQAGDKNIQILLTDTVGFVSNLPHQLIDAFRSTLEEAALADFLIIVCDAAHPAMPECL 322
Query: 396 TTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+VL ++ S K I NK+D
Sbjct: 323 EVTKKVLDELSCSG---KPSIIAINKMD 347
>gi|228470781|ref|ZP_04055629.1| GTP-binding protein HflX [Porphyromonas uenonis 60-3]
gi|228307454|gb|EEK16459.1| GTP-binding protein HflX [Porphyromonas uenonis 60-3]
Length = 411
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/361 (34%), Positives = 196/361 (54%), Gaps = 49/361 (13%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ I +++ E AIF + L+ Q RN+ER G +LDR LI++IF
Sbjct: 62 TFVGKGKLDEIAEYVSAHEVGL---AIFDDE-LAPNQLRNIERQLGIRILDRTSLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q E+A Y RL R+ + R GG +
Sbjct: 118 ATRAQTAHAKTQVEMAQYQYMLPRLTRL-----------------WTHLERQRGGNIGLR 160
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR IL + S L Q++++ + ++VQR R + + VA+VGYTN
Sbjct: 161 GPGETQLETDRRIILRKISQLKEQLKKIDKQKSVQRQNRGK--------MVRVALVGYTN 212
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ L+ SD+F++ +LFATLD ++ VVL LL+DTVGFI LP QLV++F
Sbjct: 213 VGKSTLMNVLAKSDIFAENKLFATLDTTVRKVVL-GNLAFLLADTVGFIRKLPTQLVESF 271
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL+EV E+DL++HV+D + P E+ V + L+++ +K + I V+NKID +
Sbjct: 272 KSTLDEVRESDLILHVVDISHPEFEDQIAVVTETLREIDALGDKPQ--ILVFNKIDAY-- 327
Query: 428 EMGDVEYI--DGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMN 485
++I D DD++ ++ + T E ++ + G N+ F+S GE M+
Sbjct: 328 -----QHIPKDPDDLTPATKL---NRTREELEKSWMARMG-----NDCTFISARTGEGMD 374
Query: 486 K 486
+
Sbjct: 375 E 375
>gi|359786588|ref|ZP_09289708.1| GTP-binding protein HflX [Halomonas sp. GFAJ-1]
gi|359296119|gb|EHK60373.1| GTP-binding protein HflX [Halomonas sp. GFAJ-1]
Length = 436
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/310 (38%), Positives = 175/310 (56%), Gaps = 33/310 (10%)
Query: 119 LKSGKARAD--TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPV 176
L + + R D TF G G +E ++ + E+ + + N L Q+RNLER V
Sbjct: 46 LTASRQRPDSRTFIGTGKLEELRAMLAAHEA----ELVIFNHTLKPSQERNLERELKCRV 101
Query: 177 LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSAR 236
LDR GLI++IF A T E KLQ ELA L Y +RL+R G T
Sbjct: 102 LDRTGLILDIFAQRARTHEGKLQVELAQLEYMSTRLIR----------GWTHLE------ 145
Query: 237 GRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRG 296
R GG G + G GET+L+ RR + R + ++++VR R R AR R
Sbjct: 146 -RQKGGIG-LRGPGETQLETDRRLLRVRIKSIHKRLDKVRSQREQNRRARSRAE------ 197
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFI 356
+ +V++VGYTNAGKSTL +AL+++++++ +LFATLDP L+ + + V+L+DTVGFI
Sbjct: 198 IHSVSLVGYTNAGKSTLFNALTNAEVYAADQLFATLDPTLRRLEIEDVGPVVLADTVGFI 257
Query: 357 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI 416
LP +LV+AF ATL+E EA LLVHV+D P+ + + V +VL+++G ++
Sbjct: 258 RHLPHKLVEAFRATLQEAAEASLLVHVIDAADPDRDLNVEQVNRVLEEIGADSVP---VL 314
Query: 417 EVWNKIDYHD 426
+V NKID D
Sbjct: 315 KVMNKIDRLD 324
>gi|206974991|ref|ZP_03235906.1| GTP-binding protein [Bacillus cereus H3081.97]
gi|423371852|ref|ZP_17349192.1| GTP-binding protein HflX [Bacillus cereus AND1407]
gi|423606405|ref|ZP_17582298.1| GTP-binding protein HflX [Bacillus cereus VD102]
gi|206747010|gb|EDZ58402.1| GTP-binding protein [Bacillus cereus H3081.97]
gi|401100936|gb|EJQ08929.1| GTP-binding protein HflX [Bacillus cereus AND1407]
gi|401241961|gb|EJR48339.1| GTP-binding protein HflX [Bacillus cereus VD102]
Length = 419
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------IPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIELPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|330817161|ref|YP_004360866.1| Small GTP-binding protein [Burkholderia gladioli BSR3]
gi|327369554|gb|AEA60910.1| Small GTP-binding protein [Burkholderia gladioli BSR3]
Length = 400
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 197/376 (52%), Gaps = 42/376 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N ++D + N L+ QQRNLER + V+DR LI
Sbjct: 52 AAMFIGSGKAEELRLACDAN------DVDIVIFNHPLAPAQQRNLERTLNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R+ R + ++++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHNTQRRQRERN-----RTM-SMSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V + ++++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYIGDEVGQIVVSDTVGFIRELPHQ 261
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLHEIGADAIR---QVLVFNKI 318
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDDADNNDGFVSE-D 479
D E + ++ D+ N SR T + +D I DA G + E D
Sbjct: 319 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLDTLRAAIAEIASSDALAGTGLLPERD 378
Query: 480 L---GESMNKNHNDYS 492
+ G + + H+D++
Sbjct: 379 VRFDGNGLTEPHDDHT 394
>gi|15605103|ref|NP_219888.1| GTP binding protein [Chlamydia trachomatis D/UW-3/CX]
gi|385243586|ref|YP_005811432.1| GTP-binding protein [Chlamydia trachomatis D-EC]
gi|385244466|ref|YP_005812310.1| GTP-binding protein [Chlamydia trachomatis D-LC]
gi|3328804|gb|AAC67975.1| GTP Binding Protein [Chlamydia trachomatis D/UW-3/CX]
gi|297748509|gb|ADI51055.1| HflX [Chlamydia trachomatis D-EC]
gi|297749389|gb|ADI52067.1| HflX [Chlamydia trachomatis D-LC]
gi|440527973|emb|CCP53457.1| GTPase HflX [Chlamydia trachomatis D/SotonD5]
gi|440528864|emb|CCP54348.1| GTPase HflX [Chlamydia trachomatis D/SotonD6]
gi|440532438|emb|CCP57948.1| GTPase HflX [Chlamydia trachomatis G/SotonG1]
Length = 447
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 163/273 (59%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D + + +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYVENKLFA 259
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLDP+ + VLP G++VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
E+ T +LQ++G+++ + +I V NK+D
Sbjct: 320 ALEYVETTKAILQELGITQPQ---VITVLNKMD 349
>gi|227535923|ref|ZP_03965972.1| GTP-binding protein HflX [Sphingobacterium spiritivorum ATCC 33300]
gi|227244166|gb|EEI94181.1| GTP-binding protein HflX [Sphingobacterium spiritivorum ATCC 33300]
Length = 402
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 166/298 (55%), Gaps = 34/298 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E IK +I+ E +D + + LS Q RN+E + +LDR LI++IF
Sbjct: 64 TFIGSGKMEEIKSYIDAEE----IDMVVFDDELSPSQLRNIENFFKVKILDRSNLILDIF 119
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+HA T +AK Q ELA L Y RL R+ + R GG G +
Sbjct: 120 ASHAKTAQAKTQVELAQLQYILPRLTRMW-----------------THLERQRGGIG-MR 161
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE++++ RR IL + S +++ + + QR R + VA+VGYTN
Sbjct: 162 GPGESQIESDRRMILNKISLFKERLKSIDKQNETQRKNRGE--------MIRVALVGYTN 213
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKST+++ +S SD+ + +LFATLD ++ VV+ LLSDTVGFI LP LV+ F
Sbjct: 214 VGKSTIMNMISKSDVLIENKLFATLDTTVRKVVI-DNLPFLLSDTVGFIRKLPHHLVECF 272
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
+TL+EV EAD+L+HV+D + PN E+H V + L+ +G + K +I V+NKID +
Sbjct: 273 KSTLDEVREADVLIHVVDISHPNFEDHIHAVNETLKDLGALD---KPVITVFNKIDAY 327
>gi|253682206|ref|ZP_04863003.1| GTP-binding protein [Clostridium botulinum D str. 1873]
gi|253561918|gb|EES91370.1| GTP-binding protein [Clostridium botulinum D str. 1873]
Length = 597
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 168/310 (54%), Gaps = 41/310 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE + + + I + LS Q RNLE A G V+DR LI+EIF
Sbjct: 223 FIGEGKVEELSMLRQACNA----NLIIFDDELSASQIRNLENATGTKVIDRTTLILEIFA 278
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A TKEAK+Q ELA L Y+ RL+ G V+S G G G RG
Sbjct: 279 RRARTKEAKIQVELAQLKYRLPRLI--------------GMGTVLSRTGAGIGTRG---- 320
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE +L++ +R I ER L ++ ++++TR +QR R R + V++VGYTNA
Sbjct: 321 PGEKKLEIDKRHIRERIYDLNKELSKIKKTRQIQRDKRSREN------IPKVSLVGYTNA 374
Query: 309 GKSTLVSALSD----------SDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
GKSTL + L + ++F LFATLD ++++LP R + L+DTVGFI
Sbjct: 375 GKSTLRNKLCEIASPKDVYQKEEVFEADMLFATLDVTTRALILPDNRLITLTDTVGFIRK 434
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP LV+AF +TLEEV+ ++LL+HV+D ++ + + V VL+++G ++ K MI +
Sbjct: 435 LPHDLVEAFKSTLEEVINSELLLHVVDASSESAYKQIEAVNVVLEELGAAD---KPMILL 491
Query: 419 WNKIDYHDEE 428
NK+D E
Sbjct: 492 LNKVDTASNE 501
>gi|134299122|ref|YP_001112618.1| HSR1-like GTP-binding protein [Desulfotomaculum reducens MI-1]
gi|134051822|gb|ABO49793.1| GTP-binding protein, HSR1-related protein [Desulfotomaculum
reducens MI-1]
Length = 421
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 167/298 (56%), Gaps = 35/298 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
TF G G + + AE E+ A + ++ LS Q RNLE G V+DR LI++
Sbjct: 60 TFIGKGKAQEL------AEYCREIHANMVVIDRELSPAQARNLEDRLGVKVIDRTQLILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T+E KLQ ELA L Y RL + RL G
Sbjct: 114 IFARRAQTREGKLQVELAQLKYLLPRLTGLGTQLSRLGGGIGTRG--------------- 158
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GET+L++ RRRI +R S L +++EV+R R++ R +R+ L V++VGY
Sbjct: 159 ---PGETKLEVDRRRIRKRISDLEQELKEVQRHRSLLRKSRK------SEPLPIVSLVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL+ +L+ +D+ + +LFATLDP + + LP+ VLL+DTVGFI +LP LV
Sbjct: 210 TNAGKSTLLKSLTGADILVEDKLFATLDPTTRRISLPNNDNVLLTDTVGFIQNLPHHLVA 269
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATLEEV E+DLL+H++D + PN E V VL+ + V + K I V+NKID
Sbjct: 270 AFRATLEEVQESDLLLHIVDASHPNYEGQIRAVETVLESLHVLD---KPSIMVFNKID 324
>gi|416231154|ref|ZP_11628699.1| GTP-binding proten HflX [Moraxella catarrhalis 46P47B1]
gi|416254498|ref|ZP_11638764.1| GTP-binding proten HflX [Moraxella catarrhalis O35E]
gi|326559950|gb|EGE10348.1| GTP-binding proten HflX [Moraxella catarrhalis 46P47B1]
gi|326577428|gb|EGE27312.1| GTP-binding proten HflX [Moraxella catarrhalis O35E]
Length = 469
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 175/306 (57%), Gaps = 34/306 (11%)
Query: 123 KARADTFFGPGTVETI-----KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
K A F G G E I + ++ ++ IF N L+ Q+RNLE VL
Sbjct: 53 KPHAKYFVGTGKAEEIAEAVKRFRDTNDDNTDDVIVIF-NHTLTPSQERNLESLIKCRVL 111
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 112 DRTGLILDIFAQRARTHEGKLQVELAQLNHLATRLVR----------GWT-------HLE 154
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + L +++++V++TR RA R++ SD +
Sbjct: 155 RQKGGIG-LRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQK---SD---I 207
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
T+++VGYTNAGKSTL + L+D ++++ +LFATLDP L+ V P V+L+DTVGF+
Sbjct: 208 PTISLVGYTNAGKSTLFNHLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVR 267
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV++FHATLEE +EADLL+HV+D + ++ V VL+Q+ ++
Sbjct: 268 HLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAP----ILL 323
Query: 418 VWNKID 423
V+NKID
Sbjct: 324 VFNKID 329
>gi|333984514|ref|YP_004513724.1| GTP-binding protein HflX [Methylomonas methanica MC09]
gi|333808555|gb|AEG01225.1| GTP-binding proten HflX [Methylomonas methanica MC09]
Length = 421
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/311 (39%), Positives = 178/311 (57%), Gaps = 34/311 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G ++ IK + S+ + D + VN LS Q+RNLE+A V+DR GLI++IF
Sbjct: 55 FVGKGKLDEIKTVV----SEQQADIVIVNHPLSPSQERNLEKALEVRVVDRNGLILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 111 QRAQTFEGKLQVELAQLKHLSTRLIR----------GWTHLE-------RQKGGIG-LRG 152
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R + ++E+V++ R R+ R++ + TV++VGYTNA
Sbjct: 153 PGETQLETDRRLLAVRIKQIQQRLEKVQKQRHQGRSKRKKAE------IPTVSLVGYTNA 206
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + L+ +D+++ +LFATLDP L+ + + +V+L+DTVGFI LP +LV AF
Sbjct: 207 GKSTLFNTLTGADIYAADQLFATLDPTLRHLAIGDSGEVVLADTVGFIRHLPHELVAAFR 266
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 428
+TL+E EADLL+HV+D A E+ T+ QV Q + E + V+NKID D
Sbjct: 267 STLQEASEADLLLHVIDAHA---EDRDDTIFQVNQVLDDIEAGKIPQLRVFNKIDLLD-- 321
Query: 429 MGDVEYIDGDD 439
G + +ID DD
Sbjct: 322 -GVLPHIDYDD 331
>gi|296112906|ref|YP_003626844.1| GTP-binding proten HflX [Moraxella catarrhalis RH4]
gi|295920600|gb|ADG60951.1| GTP-binding proten HflX [Moraxella catarrhalis BBH18]
Length = 469
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 175/306 (57%), Gaps = 34/306 (11%)
Query: 123 KARADTFFGPGTVETI-----KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
K A F G G E I + ++ ++ IF N L+ Q+RNLE VL
Sbjct: 53 KPHAKYFVGTGKAEEIAEAVKRFRDTNDDNTDDVIVIF-NHTLTPSQERNLESLIKCRVL 111
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 112 DRTGLILDIFAQRARTHEGKLQVELAQLNHLATRLVR----------GWT-------HLE 154
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + L +++++V++TR RA R++ SD +
Sbjct: 155 RQKGGIG-LRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQK---SD---I 207
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
T+++VGYTNAGKSTL + L+D ++++ +LFATLDP L+ V P V+L+DTVGF+
Sbjct: 208 PTISLVGYTNAGKSTLFNHLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVR 267
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV++FHATLEE +EADLL+HV+D + ++ V VL+Q+ ++
Sbjct: 268 HLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAP----ILL 323
Query: 418 VWNKID 423
V+NKID
Sbjct: 324 VFNKID 329
>gi|429738388|ref|ZP_19272198.1| GTP-binding protein HflX [Prevotella saccharolytica F0055]
gi|429160359|gb|EKY02827.1| GTP-binding protein HflX [Prevotella saccharolytica F0055]
Length = 415
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 180/329 (54%), Gaps = 22/329 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGELDAIFV 156
Y D F + V V+ + K T+ G G +E IK +I E ++ E+ +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQKVNAPSMVTYVGKGKLEEIKQYIKAEEEAEREIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E+ +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIEKELNVKILDRTSLILDIFAMRAQTASAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILGRMALLKERLAEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R GR + T A+VGYTN GKSTL++ LS S++F++ +LFATLD +
Sbjct: 203 KQKTTQRKNR-------GRMIRT-ALVGYTNVGKSTLMNLLSKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLLVHV+D + P+ EE
Sbjct: 255 RKVVI-ENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPDFEEQIQ 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
V L+++ +++ +MI V+NKID +
Sbjct: 314 VVENTLKELDCADK--PSMI-VFNKIDSY 339
>gi|374852461|dbj|BAL55393.1| GTP-binding protein hflX [uncultured beta proteobacterium]
Length = 399
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 130/317 (41%), Positives = 177/317 (55%), Gaps = 35/317 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLER 170
+V +++ K TF G G V + + +GA D + N LS QQRNLE+
Sbjct: 41 IVGALTVRRAKPDPATFLGSGKVTELAALVREHGA------DLVVFNHALSPAQQRNLEK 94
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
A V+DR LI++IF A + E KLQ ELA L Y +RLVR G
Sbjct: 95 ALASRVVDRTTLILDIFALRAKSAEGKLQVELAQLEYLSTRLVR-------------GWT 141
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
+ RG G G RG GET+L+ RR I R L +Q++ ++ RA +R AR+R+G
Sbjct: 142 HLERQRG-GIGLRG----PGETQLETDRRLIGMRVKRLKAQLQRLQTQRATRRRARQRYG 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLS 350
+ V++VGYTNAGKSTL +AL+ + ++ +LFATLD + + LP V+LS
Sbjct: 197 ------VPQVSLVGYTNAGKSTLFNALTKAQTYAANQLFATLDTTSRRIWLPQTGNVVLS 250
Query: 351 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 410
DTVGFI DLP LV AFHATLEEV EADLL+ V D +P+ + R V + L+Q+G
Sbjct: 251 DTVGFIRDLPHDLVAAFHATLEEVKEADLLLVVSDLASPDADAQRLAVTETLRQIGAESV 310
Query: 411 KLKNMIEVWNKIDYHDE 427
++EV NKID D+
Sbjct: 311 P---ILEVGNKIDLLDQ 324
>gi|313205251|ref|YP_004043908.1| GTP-binding protein hflx [Paludibacter propionicigenes WB4]
gi|312444567|gb|ADQ80923.1| GTP-binding protein HflX [Paludibacter propionicigenes WB4]
Length = 404
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 164/296 (55%), Gaps = 34/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ GPG + IK ++ + E+ + + LS Q RN+E +LDR LI++IF
Sbjct: 58 TYVGPGKLIEIKAFVD----ENEIGVVIFDDELSPKQLRNIEAELKVLILDRTSLILDIF 113
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA L Y RL R+ + R GG G +
Sbjct: 114 AKRAQTASAKTQVELAQLQYTLPRLTRLW-----------------THLERQQGGIG-MR 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR IL + S L ++++ + + QR R + + VA+VGYTN
Sbjct: 156 GPGETQIETDRRIILTKISLLKQNLKDIDKQMSTQRKNRGK--------MVRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ +S S++F++ +LFATLD ++ V++ LLSDTVGFI LP LV +F
Sbjct: 208 VGKSTLMNLISKSEIFAENKLFATLDTTVRKVII-DNLPFLLSDTVGFIRKLPHHLVQSF 266
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+EV EADLL+HV+D + PN EE V Q L+++ E K MI ++NKID
Sbjct: 267 KSTLDEVREADLLLHVVDVSHPNFEEQLEVVNQTLKEIDPLE---KPMILIFNKID 319
>gi|449104034|ref|ZP_21740776.1| GTP-binding protein HflX [Treponema denticola AL-2]
gi|448963891|gb|EMB44565.1| GTP-binding protein HflX [Treponema denticola AL-2]
Length = 391
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 183/353 (51%), Gaps = 44/353 (12%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPP---HVVVQNPSLKSGKARADTFFGPG 133
LQ K EAL +EE+ F K L + +NP+ T G G
Sbjct: 33 LQEKSAEAL---KEIEEKELKSLVETIFLKPLSSLRFRIAKENPA---------TLVGSG 80
Query: 134 TVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHT 193
+E I I E +G D + N+ +S QRNLE A V+DR +II+IF A T
Sbjct: 81 QLEKIAQAI---EEEGA-DLVVFNSAVSPRIQRNLEAALNTCVIDRSEVIIQIFADRAQT 136
Query: 194 KEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETE 253
+EA LQAELA L Y RL R R T + RG G RG GAGE +
Sbjct: 137 REAVLQAELARLEYSMPRLTR------RWT-------SLAQQRGGAKGTRGASRGAGEKK 183
Query: 254 LQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTL 313
L+L RR + + L ++E VR R+ QR + R G+ G A+VGYTNAGKS+L
Sbjct: 184 LELDRRHLKTEIAKLKKEVERVRLQRSEQR--KTRLNGNKKIG----AIVGYTNAGKSSL 237
Query: 314 VSALSDSDLFSDARLFATLDPRLKSVVLPSGRK---VLLSDTVGFISDLPLQLVDAFHAT 370
+ LS +++F++ +LFATLD + V L +G K +LL+DTVGF+S+LP QL+DAF +T
Sbjct: 238 LKKLSGAEVFTEDKLFATLDAETRKVFLQTGEKNIQILLTDTVGFVSNLPHQLIDAFRST 297
Query: 371 LEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
LEE AD L+ V D P + E +VL ++ S+ K I NK+D
Sbjct: 298 LEEAALADFLIIVCDAAHPAMPECLEITKKVLDELSCSD---KPSIIAINKMD 347
>gi|49481110|ref|YP_036006.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|228933156|ref|ZP_04096013.1| hypothetical protein bthur0009_16230 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|49332666|gb|AAT63312.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|228826513|gb|EEM72289.1| hypothetical protein bthur0009_16230 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 419
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 170/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + +IN + + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYINEVNA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------IPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|407704252|ref|YP_006827837.1| methyltransferase [Bacillus thuringiensis MC28]
gi|407381937|gb|AFU12438.1| GTP-binding protein [Bacillus thuringiensis MC28]
Length = 419
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/315 (37%), Positives = 172/315 (54%), Gaps = 42/315 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTAMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEV 418
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV +N+ I
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV-----ENIPTIYA 322
Query: 419 WNKIDYHDEEMGDVE 433
+NK D D E+ V+
Sbjct: 323 YNKSDMIDVEIPKVQ 337
>gi|47565556|ref|ZP_00236597.1| GTP-binding protein hflX [Bacillus cereus G9241]
gi|47557546|gb|EAL15873.1| GTP-binding protein hflX [Bacillus cereus G9241]
Length = 419
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------IPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|228914459|ref|ZP_04078069.1| hypothetical protein bthur0012_16890 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228845170|gb|EEM90211.1| hypothetical protein bthur0012_16890 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 419
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------IPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|196033395|ref|ZP_03100807.1| GTP-binding protein [Bacillus cereus W]
gi|228945480|ref|ZP_04107831.1| hypothetical protein bthur0007_16410 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|195993829|gb|EDX57785.1| GTP-binding protein [Bacillus cereus W]
gi|228814172|gb|EEM60442.1| hypothetical protein bthur0007_16410 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 419
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------IPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPGNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|419798190|ref|ZP_14323613.1| GTP-binding protein HflX [Neisseria sicca VK64]
gi|385695842|gb|EIG26387.1| GTP-binding protein HflX [Neisseria sicca VK64]
Length = 396
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 174/315 (55%), Gaps = 39/315 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVE----TIKCHINGAESKGELDAIFVNAILSGIQQRNL 168
+V + K KA F G G E +K H G A+F N L+ Q+RNL
Sbjct: 59 LVLRETAKRDKAHTAYFVGTGKAEELAAAVKLHDIGL-------AVF-NHELTPTQERNL 110
Query: 169 ERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETG 228
E+ VLDRVGLI+ IF A ++E KLQ ELA L + RLVR G
Sbjct: 111 EKILQCRVLDRVGLILAIFAKRAQSQEGKLQVELAQLNHLSGRLVR-------------G 157
Query: 229 EAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR 288
+ S +G G G + G GET+L+ RR I ++ + L Q+ +V++ RA +R +R
Sbjct: 158 YGHLQSQKG-GIG----LKGPGETQLETDRRLIGQKITALKKQLAQVKKQRATRRKSR-- 210
Query: 289 HGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVL 348
+GR L T A+VGYTNAGKS+L + L+ +D+ + +LFATLD + + L V+
Sbjct: 211 ---MEGR-LKTFAIVGYTNAGKSSLFNRLTKADVLAKDQLFATLDTTARRLFLSHEAGVI 266
Query: 349 LSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS 408
L+DTVGF+ DLP +LV AF ATLEE AD+L+HV+D + P+ E V VL+++G
Sbjct: 267 LTDTVGFVRDLPHKLVSAFSATLEETALADVLLHVVDASNPDFERQMDDVNVVLEEIGAH 326
Query: 409 EEKLKNMIEVWNKID 423
E + V+NKID
Sbjct: 327 EVP---QLVVYNKID 338
>gi|281423549|ref|ZP_06254462.1| GTP-binding protein HflX [Prevotella oris F0302]
gi|281402369|gb|EFB33200.1| GTP-binding protein HflX [Prevotella oris F0302]
Length = 415
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 184/343 (53%), Gaps = 23/343 (6%)
Query: 85 LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHING 144
L N E + Y D F + V V+ + K+ A T+ G G +E IK +I
Sbjct: 19 LITNNQSEAKTKEYLDELEFLADTAGAVTVKRFTQKANGPSAVTYVGKGKLEEIKNYIET 78
Query: 145 AESKGE-LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
E E + + + LS Q RN+E +LDR LI++IF A T AK Q ELA
Sbjct: 79 CEENEEPIGMVIFDDELSAKQIRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELA 138
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL R+ E + + G G + G GET+L++ RR IL+
Sbjct: 139 QYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQ 189
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R + L ++ E+ + + QR R R + VA+VGYTN GKST+++ L+ S++F
Sbjct: 190 RITLLKQRLVEIDKQKITQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVF 241
Query: 324 SDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 383
++ +LFATLD ++ VV+ LL+DTVGFI LP LVD+F +TL+EV EAD+L+HV
Sbjct: 242 AENKLFATLDTTVRKVVV-DNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADVLLHV 300
Query: 384 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 425
+D + P+ EE V + L +G S++ +MI ++NKID YH
Sbjct: 301 VDISHPDFEEQIQVVEKTLADLGCSDK--PSMI-IFNKIDNYH 340
>gi|330998173|ref|ZP_08321999.1| GTP-binding protein HflX [Paraprevotella xylaniphila YIT 11841]
gi|329568865|gb|EGG50663.1| GTP-binding protein HflX [Paraprevotella xylaniphila YIT 11841]
Length = 419
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 177/335 (52%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE- 150
E + + Y D F V V+ + K + T+ G G +E I+ +I E
Sbjct: 26 ERKTNEYLDELEFLAHTAGAVTVKRFTQKVNGPNSVTYVGKGKLEEIRTYIEAEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E+ +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQLRNIEKELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKQ 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ R + QR+ R R + VA+VGYTN GKSTL++ LS SD+F++ +LFA
Sbjct: 197 RLAEIDRQKTTQRSNRGR--------MIRVALVGYTNVGKSTLMNLLSKSDVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ V++ LLSDTVGFI LP LVD+F +TL+EV EADLL+HV+D P+
Sbjct: 249 TLDTTVRKVII-DNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDIAHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
E+ V + L +G S+ K + V+NKID +
Sbjct: 308 FEDQIQVVEKTLGDLGCSD---KPCMIVFNKIDAY 339
>gi|30261871|ref|NP_844248.1| GTP-binding protein [Bacillus anthracis str. Ames]
gi|47527117|ref|YP_018466.1| GTP-binding protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49184707|ref|YP_027959.1| GTP-binding protein [Bacillus anthracis str. Sterne]
gi|65319149|ref|ZP_00392108.1| COG2262: GTPases [Bacillus anthracis str. A2012]
gi|165869538|ref|ZP_02214197.1| GTP-binding protein [Bacillus anthracis str. A0488]
gi|167633429|ref|ZP_02391754.1| GTP-binding protein [Bacillus anthracis str. A0442]
gi|167638850|ref|ZP_02397125.1| GTP-binding protein [Bacillus anthracis str. A0193]
gi|170686195|ref|ZP_02877417.1| GTP-binding protein [Bacillus anthracis str. A0465]
gi|170707351|ref|ZP_02897806.1| GTP-binding protein [Bacillus anthracis str. A0389]
gi|177650566|ref|ZP_02933533.1| GTP-binding protein [Bacillus anthracis str. A0174]
gi|190566417|ref|ZP_03019335.1| GTP-binding protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227815351|ref|YP_002815360.1| GTP-binding protein [Bacillus anthracis str. CDC 684]
gi|229601146|ref|YP_002866248.1| GTP-binding protein [Bacillus anthracis str. A0248]
gi|254684429|ref|ZP_05148289.1| GTP-binding protein [Bacillus anthracis str. CNEVA-9066]
gi|254723956|ref|ZP_05185742.1| GTP-binding protein [Bacillus anthracis str. A1055]
gi|254734730|ref|ZP_05192442.1| GTP-binding protein [Bacillus anthracis str. Western North America
USA6153]
gi|254741136|ref|ZP_05198824.1| GTP-binding protein [Bacillus anthracis str. Kruger B]
gi|254755381|ref|ZP_05207415.1| GTP-binding protein [Bacillus anthracis str. Vollum]
gi|254759919|ref|ZP_05211943.1| GTP-binding protein [Bacillus anthracis str. Australia 94]
gi|386735600|ref|YP_006208781.1| GTP-binding protein [Bacillus anthracis str. H9401]
gi|421508759|ref|ZP_15955670.1| GTP-binding protein [Bacillus anthracis str. UR-1]
gi|421635658|ref|ZP_16076257.1| GTP-binding protein [Bacillus anthracis str. BF1]
gi|30256099|gb|AAP25734.1| GTP-binding protein [Bacillus anthracis str. Ames]
gi|47502265|gb|AAT30941.1| GTP-binding protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49178634|gb|AAT54010.1| GTP-binding protein [Bacillus anthracis str. Sterne]
gi|164714978|gb|EDR20496.1| GTP-binding protein [Bacillus anthracis str. A0488]
gi|167513314|gb|EDR88685.1| GTP-binding protein [Bacillus anthracis str. A0193]
gi|167531467|gb|EDR94145.1| GTP-binding protein [Bacillus anthracis str. A0442]
gi|170127850|gb|EDS96722.1| GTP-binding protein [Bacillus anthracis str. A0389]
gi|170669892|gb|EDT20633.1| GTP-binding protein [Bacillus anthracis str. A0465]
gi|172083710|gb|EDT68770.1| GTP-binding protein [Bacillus anthracis str. A0174]
gi|190562552|gb|EDV16519.1| GTP-binding protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227003173|gb|ACP12916.1| GTP-binding protein [Bacillus anthracis str. CDC 684]
gi|229265554|gb|ACQ47191.1| GTP-binding protein [Bacillus anthracis str. A0248]
gi|384385452|gb|AFH83113.1| GTP-binding protein [Bacillus anthracis str. H9401]
gi|401821155|gb|EJT20314.1| GTP-binding protein [Bacillus anthracis str. UR-1]
gi|403396186|gb|EJY93423.1| GTP-binding protein [Bacillus anthracis str. BF1]
Length = 419
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/315 (38%), Positives = 172/315 (54%), Gaps = 42/315 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
+ G G +E + ++N E+DA + N LS Q RNLE V+DR LI++I
Sbjct: 55 YIGKGKIEEVAAYVN------EVDANMVIFNDELSPSQIRNLEADLDCKVIDRTILILDI 108
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A TKEA+LQ E+A L Y RL+ +R + GR SGG G
Sbjct: 109 FAQRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTK 151
Query: 247 S-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGY
Sbjct: 152 NKGVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------IPVVALVGY 205
Query: 306 TNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
TNAGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S
Sbjct: 206 TNAGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPGNKSFLLTDTVGFVSK 265
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I
Sbjct: 266 LPHHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYA 322
Query: 419 WNKIDYHDEEMGDVE 433
+NK D D E+ V+
Sbjct: 323 YNKSDMVDVEIPKVQ 337
>gi|377559206|ref|ZP_09788766.1| GTP-binding protein HflX [Gordonia otitidis NBRC 100426]
gi|377523664|dbj|GAB33931.1| GTP-binding protein HflX [Gordonia otitidis NBRC 100426]
Length = 520
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 172/304 (56%), Gaps = 30/304 (9%)
Query: 128 TFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G + ++ + GA D + + L+ Q LE+ V+DR LI++
Sbjct: 138 TYIGSGKAQELRDVVADTGA------DTVICDGELTPAQLTALEKVVKVKVIDRTALILD 191
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR-GSGGRG 244
IF HA ++E K Q LA + Y L R+RG GE+ A GR GS G
Sbjct: 192 IFAQHASSREGKAQVALAQMEYM---LPRLRG---------WGESMSRQAGGRAGSNGGV 239
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GET+++ RRRI ER + L QI E+R R +R+AR R GS R +AV G
Sbjct: 240 GLRGPGETKIETDRRRIRERMAKLRRQIREMRTARVTKRSARLR--GSVPR----IAVAG 293
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKS+LV+A++ S + LFATLDP + L GR+++ +DTVGF+ LP QLV
Sbjct: 294 YTNAGKSSLVNAMTGSGVLVQDALFATLDPTTRRATLDDGRELVFTDTVGFVRHLPTQLV 353
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE--VWNKI 422
+AF +TLEEVV+ADL++HV+D + P E T V +V+ V V+EE + E V NKI
Sbjct: 354 EAFRSTLEEVVDADLVLHVVDGSDPFPAEQITAVRRVINDV-VAEEGVAPPPELLVINKI 412
Query: 423 DYHD 426
D D
Sbjct: 413 DAID 416
>gi|152975231|ref|YP_001374748.1| GTP-binding protein HSR1-related [Bacillus cytotoxicus NVH 391-98]
gi|152023983|gb|ABS21753.1| GTP-binding protein HSR1-related [Bacillus cytotoxicus NVH 391-98]
Length = 419
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 171/311 (54%), Gaps = 42/311 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
+ G G + + ++ E+DA + N LS Q RNLE+ V+DR LI++I
Sbjct: 55 YIGTGKIGEVAAYVK------EVDANIVIFNDELSPSQIRNLEKDLDCKVIDRTILILDI 108
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A TKEA+LQ E+A L Y RLV +R + GR SGG G
Sbjct: 109 FAQRAKTKEAQLQVEVAHLQYMMPRLVGLR-----------------ESLGRQSGGVGTK 151
Query: 247 S-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GE +L+L RR+I E+ S L ++E + R QR R+++ + VA+VGY
Sbjct: 152 NKGVGEKKLELDRRKIEEQISVLNKELEALVVQRKTQRKQRKKNE------IPVVALVGY 205
Query: 306 TNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISD 358
TNAGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S
Sbjct: 206 TNAGKSTTMNAMLEIFNGTIEKQVFEKDMLFATLETSVRNIELPDNKSFLLTDTVGFVSK 265
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP LV AF +TLEEV EADLL+HV+D + PN E+ Q L+Q+GV E + I
Sbjct: 266 LPHHLVKAFRSTLEEVAEADLLIHVVDYSNPNYEQLIEITNQTLKQIGV--ENIPT-IYA 322
Query: 419 WNKIDYHDEEM 429
+NK D D E+
Sbjct: 323 YNKSDMMDVEI 333
>gi|336113908|ref|YP_004568675.1| GTP-binding proten HflX [Bacillus coagulans 2-6]
gi|335367338|gb|AEH53289.1| GTP-binding proten HflX [Bacillus coagulans 2-6]
Length = 416
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 174/319 (54%), Gaps = 55/319 (17%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K +A A T+ G G V ++ + S+ + D I NA LS Q RNL+ A VLDR
Sbjct: 48 KRDRADAATYIGKGKVAELRALV----SELQADLIVFNAELSPSQLRNLQAAVDCRVLDR 103
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI++IF A +KE KLQ ELA L Y RL
Sbjct: 104 TQLILDIFATRARSKEGKLQVELAQLEYLLPRL--------------------------- 136
Query: 240 SGGRG----------FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
GGRG G GET+L+ RR I R S + +Q+E V R R R R+++
Sbjct: 137 -GGRGTELSRLGGGIGTRGPGETQLETDRRHIRRRISEIKAQLETVVRHRERYRERRKKN 195
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLL 349
+ +A+VGYTNAGKSTL + LS +D + + +LFATLDP + VVLPSG LL
Sbjct: 196 H------VFQIALVGYTNAGKSTLFNRLSAADSYEENQLFATLDPMTRKVVLPSGYTALL 249
Query: 350 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 409
+DTVGFI DLP L+ AF +TLEEV EADLL+HV+D + P+ + H+ TV ++L SE
Sbjct: 250 TDTVGFIQDLPTTLIAAFRSTLEEVREADLLLHVIDSSNPDYDNHQKTVQRLL-----SE 304
Query: 410 EKLKNM--IEVWNKIDYHD 426
++ ++ + ++NK+D D
Sbjct: 305 LEMNHLPQLAIYNKMDIKD 323
>gi|406830260|ref|ZP_11089854.1| GTP-binding proten HflX [Schlesneria paludicola DSM 18645]
Length = 437
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 172/302 (56%), Gaps = 32/302 (10%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
G+ T G G +E +K + ++ G IF N L+ Q R+LE + ++DR
Sbjct: 57 GRPHPGTCLGKGKIEELK---DLVDATGAELIIFDNN-LTPSQGRHLELETKRIIVDRSE 112
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI++IF HA + EA+LQ ELA L Y ++RL R+ R+ G
Sbjct: 113 LILDIFATHARSAEARLQVELAQLQYTRTRLKRMWTHLERI-----------------EG 155
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G G G GE +++ RR I +R L ++ EV R +R R+R S V+
Sbjct: 156 GIGASRGPGEKQIETDRRIIDQRIDELKLRLAEVEVRR--ERMVRQRESHS------LVS 207
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPL 361
VVGYTNAGKSTL++AL+ +D++ +LFATLD R + +PS ++LLSDTVGF+ DLP
Sbjct: 208 VVGYTNAGKSTLMNALTGADVYVANQLFATLDTRTRKWTIPSWGELLLSDTVGFVRDLPH 267
Query: 362 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 421
LV +F +TLEE +ADLL+HV+D + P E+ TV QVL ++GV +++N I V NK
Sbjct: 268 SLVASFKSTLEEARQADLLLHVVDASNPEAEQQAETVEQVLNEIGV---EIRNYILVLNK 324
Query: 422 ID 423
+D
Sbjct: 325 VD 326
>gi|416241280|ref|ZP_11632661.1| GTP-binding proten HflX [Moraxella catarrhalis BC7]
gi|326572797|gb|EGE22783.1| GTP-binding proten HflX [Moraxella catarrhalis BC7]
Length = 469
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 175/306 (57%), Gaps = 34/306 (11%)
Query: 123 KARADTFFGPGTVETI-----KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
K A F G G E I + ++ ++ IF N L+ Q+RNLE VL
Sbjct: 53 KPHAKYFVGTGKAEEIAEAVKRFRDTNDDNTDDVIVIF-NHTLTPSQERNLESLIKCRVL 111
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 112 DRTGLILDIFAQRARTHEGKLQVELAQLNHLATRLVR----------GWT-------HLE 154
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + L +++++V++TR RA R++ SD +
Sbjct: 155 RQKGGIG-LRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQK---SD---I 207
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
T+++VGYTNAGKSTL + L+D ++++ +LFATLDP L+ V P V+L+DTVGF+
Sbjct: 208 PTISLVGYTNAGKSTLFNRLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVR 267
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV++FHATLEE +EADLL+HV+D + ++ V VL+Q+ ++
Sbjct: 268 HLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAP----ILL 323
Query: 418 VWNKID 423
V+NKID
Sbjct: 324 VFNKID 329
>gi|416217283|ref|ZP_11624232.1| GTP-binding proten HflX [Moraxella catarrhalis 7169]
gi|416233349|ref|ZP_11629269.1| GTP-binding proten HflX [Moraxella catarrhalis 12P80B1]
gi|416238660|ref|ZP_11631540.1| GTP-binding proten HflX [Moraxella catarrhalis BC1]
gi|421779722|ref|ZP_16216214.1| GTP-binding proten HflX [Moraxella catarrhalis RH4]
gi|326561134|gb|EGE11499.1| GTP-binding proten HflX [Moraxella catarrhalis 7169]
gi|326566655|gb|EGE16796.1| GTP-binding proten HflX [Moraxella catarrhalis 12P80B1]
gi|326567977|gb|EGE18074.1| GTP-binding proten HflX [Moraxella catarrhalis BC1]
gi|407813432|gb|EKF84214.1| GTP-binding proten HflX [Moraxella catarrhalis RH4]
Length = 469
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 175/306 (57%), Gaps = 34/306 (11%)
Query: 123 KARADTFFGPGTVETI-----KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
K A F G G E I + ++ ++ IF N L+ Q+RNLE VL
Sbjct: 53 KPHAKYFVGTGKAEEIAEAVKRFRDTNDDNTDDVIVIF-NHTLTPSQERNLESLIKCRVL 111
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 112 DRTGLILDIFAQRARTHEGKLQVELAQLNHLATRLVR----------GWT-------HLE 154
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + L +++++V++TR RA R++ SD +
Sbjct: 155 RQKGGIG-LRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQK---SD---I 207
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
T+++VGYTNAGKSTL + L+D ++++ +LFATLDP L+ V P V+L+DTVGF+
Sbjct: 208 PTISLVGYTNAGKSTLFNRLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVR 267
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV++FHATLEE +EADLL+HV+D + ++ V VL+Q+ ++
Sbjct: 268 HLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAP----ILL 323
Query: 418 VWNKID 423
V+NKID
Sbjct: 324 VFNKID 329
>gi|228984964|ref|ZP_04145133.1| hypothetical protein bthur0001_16670 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229155447|ref|ZP_04283556.1| hypothetical protein bcere0010_16400 [Bacillus cereus ATCC 4342]
gi|384179817|ref|YP_005565579.1| GTP-binding protein [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|228628008|gb|EEK84726.1| hypothetical protein bcere0010_16400 [Bacillus cereus ATCC 4342]
gi|228774787|gb|EEM23184.1| hypothetical protein bthur0001_16670 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|324325901|gb|ADY21161.1| GTP-binding protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 419
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------IPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|340352232|ref|ZP_08675117.1| GTP-binding protein HflX [Prevotella pallens ATCC 700821]
gi|339614960|gb|EGQ19645.1| GTP-binding protein HflX [Prevotella pallens ATCC 700821]
Length = 420
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 193/365 (52%), Gaps = 22/365 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + G ++ G G + IK +I E + E + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVGGPNMTSYVGKGKLAEIKEYIKQKEDEDEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQLRNIENELQVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMTLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R L VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKITQRKNRGR--------LIRVALVGYTNVGKSTIMNMLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VVL LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVL-QNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIQ 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPV 456
V + L+ + +E+ +MI ++NKID + E + + + + N S E K T +
Sbjct: 314 VVTETLKDLDCAEK--PSMI-IFNKIDNYSWEEKEEDDLTPMNKKNISLTELKRTWMAKL 370
Query: 457 DVECI 461
+ +C+
Sbjct: 371 NDDCL 375
>gi|300771631|ref|ZP_07081506.1| GTP-binding protein HflX [Sphingobacterium spiritivorum ATCC 33861]
gi|300761620|gb|EFK58441.1| GTP-binding protein HflX [Sphingobacterium spiritivorum ATCC 33861]
Length = 396
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 166/298 (55%), Gaps = 34/298 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E IK +I+ E +D + + LS Q RN+E + +LDR LI++IF
Sbjct: 64 TFIGSGKMEEIKSYIDAEE----IDMVVFDDELSPSQLRNIENFFKVKILDRSNLILDIF 119
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+HA T +AK Q ELA L Y RL R+ + R GG G +
Sbjct: 120 ASHAKTAQAKTQVELAQLQYILPRLTRMW-----------------THLERQRGGIG-MR 161
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE++++ RR IL + S +++ + + QR R + VA+VGYTN
Sbjct: 162 GPGESQIESDRRMILNKISLFKERLKSIDKQNETQRKNRGE--------MIRVALVGYTN 213
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKST+++ +S SD+ + +LFATLD ++ VV+ LLSDTVGFI LP LV+ F
Sbjct: 214 VGKSTIMNMISKSDVLIENKLFATLDTTVRKVVI-DNLPFLLSDTVGFIRKLPHHLVECF 272
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
+TL+EV EAD+L+HV+D + PN E+H V + L+ +G + K +I ++NKID +
Sbjct: 273 KSTLDEVREADVLIHVVDISHPNFEDHIHAVNETLKDLGALD---KPVITIFNKIDAY 327
>gi|237747715|ref|ZP_04578195.1| HflX GTP-binding protein [Oxalobacter formigenes OXCC13]
gi|229379077|gb|EEO29168.1| HflX GTP-binding protein [Oxalobacter formigenes OXCC13]
Length = 379
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 198/382 (51%), Gaps = 43/382 (11%)
Query: 114 VQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWG 173
V N + K A + G G V+ I ++ ++ D + N LS QQRNLE+
Sbjct: 35 VLNVTGKRASPDAAYYVGSGKVDEIVAAVHLYKA----DVVIFNHALSPAQQRNLEKRLE 90
Query: 174 KPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVV 233
V+DR LI++IF A + E K+Q ELA L + +RLVR G T
Sbjct: 91 VNVVDRTSLILDIFAQRAKSHEGKVQVELAQLQHLMTRLVR----------GWTHLE--- 137
Query: 234 SARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSD 293
R GG G + G GET+L+ RR I R L S++E+++R R QR +R R+
Sbjct: 138 ----RQKGGIG-LRGPGETQLETDRRLIGTRVRMLRSKLEKLQRQRETQRRSRNRNH--- 189
Query: 294 GRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTV 353
+ +V++VGYTNAGKSTL +A++ + + +LFATLD + + + V++SDTV
Sbjct: 190 ---VFSVSLVGYTNAGKSTLFNAMTKAGTYVADQLFATLDTTSRRIYIEETGNVVISDTV 246
Query: 354 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 413
GF+ +LP QLV AF ATLEE + ADLL+HV+D P +E V VL+++G E +
Sbjct: 247 GFVRELPHQLVAAFRATLEETIHADLLLHVVDAANPMRKEQIEQVNLVLKEIGA--ENVP 304
Query: 414 NMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDDADN 471
++ VWNKID E G ++ D+ SR T +D+ + I Y +D +
Sbjct: 305 QLL-VWNKIDLAGLEPG----LERDEYGRISRVFVSAGTGAGLDLLRDAIAEYAKEDKTS 359
Query: 472 NDGFVSEDLGESMNKNHNDYSD 493
D+ E +H YSD
Sbjct: 360 R----MSDMDEGNGSDH--YSD 375
>gi|336399808|ref|ZP_08580608.1| GTP-binding proten HflX [Prevotella multisaccharivorax DSM 17128]
gi|336069544|gb|EGN58178.1| GTP-binding proten HflX [Prevotella multisaccharivorax DSM 17128]
Length = 419
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 178/330 (53%), Gaps = 23/330 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGELDAIFV 156
Y D F + V V+ + ++G ++ G G +E I +I E ++ E+ +
Sbjct: 35 YLDELEFLADTAGAVTVKRFTQRTGGPSQTSYVGKGKLEEIHQYIKDEEDNEREIGMVIF 94
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 95 DDELSAKQLRNIENELHVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRM- 153
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL R S L ++ E+
Sbjct: 154 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKQRLTEID 205
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ ++ QR R R L A+VGYTN GKSTL++ L+ S++F++ +LFATLD +
Sbjct: 206 KQKSTQRKNRGR--------LIRAALVGYTNVGKSTLMNLLAKSEVFAENKLFATLDTTV 257
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VV+ LL+DTVGFI LP LV++F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 258 RKVVI-RNLPFLLADTVGFIRKLPTDLVESFKSTLDEVREADLLLHVVDISHPDFEEQIQ 316
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKID-YH 425
V L+ +G S+ K I ++NKID YH
Sbjct: 317 VVNNTLKDLGCSD---KPTILIFNKIDNYH 343
>gi|387792553|ref|YP_006257618.1| GTP-binding protein HflX [Solitalea canadensis DSM 3403]
gi|379655386|gb|AFD08442.1| GTP-binding protein HflX [Solitalea canadensis DSM 3403]
Length = 396
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 173/307 (56%), Gaps = 36/307 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGK-PVLDRVGLII 184
+ TF G G +E I ++ E+ D + + LS Q RNL R + + +LDR LI+
Sbjct: 59 SKTFVGSGKLEEIIEYVQAEEA----DMVIFDDELSPSQLRNLGREFKEIKILDRSNLIL 114
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
+IF A T +AK Q ELA Y RL R+ + R GG G
Sbjct: 115 DIFANRAQTAQAKTQVELAQYQYLLPRLTRMW-----------------THLERQRGGIG 157
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GE++++ RR IL++ + L ++E++ + A QR R L VA+VG
Sbjct: 158 -MRGPGESQIETDRRIILDKIALLKERLEKIDKQNATQRKNRGE--------LVRVALVG 208
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTN GKST+++ LS S++F++ +LFATLD ++ +V+ + LLSDTVGFI LP LV
Sbjct: 209 YTNVGKSTIMNMLSKSEVFAENKLFATLDTTVRKMVI-NNLPFLLSDTVGFIRKLPHHLV 267
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
+ F +TL EV EAD+L+HV D + PN E+H TV + L+++G + K MI V+NKID
Sbjct: 268 ECFKSTLAEVREADILIHVADISHPNFEDHIITVNETLKELGARD---KEMITVFNKIDA 324
Query: 425 HDEEMGD 431
+ E GD
Sbjct: 325 YKGE-GD 330
>gi|71275937|ref|ZP_00652220.1| Small GTP-binding protein domain [Xylella fastidiosa Dixon]
gi|71163314|gb|EAO13033.1| Small GTP-binding protein domain [Xylella fastidiosa Dixon]
gi|71730233|gb|EAO32319.1| Small GTP-binding protein domain [Xylella fastidiosa subsp. sandyi
Ann-1]
Length = 450
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 169/296 (57%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G ++ IK A++ G D I +N LS +Q+RNLE++ + V+DR GLI++IF
Sbjct: 56 TLISSGKLKEIK---ETADATGA-DLILINHSLSPVQERNLEKSLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G RG
Sbjct: 112 AQRACSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRGGAIGLRG--- 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR + +R L ++ +V R R AR R + +A+VGYTN
Sbjct: 156 -PGETQLETDRRLLQKRVEQLQKRLSKVEVQRTQMRRARVRSK------VPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
+GKSTL +AL+ + ++ +LFATLDP+++ +VLP G +L+DTVGF+ LP +LV AF
Sbjct: 209 SGKSTLFNALTGASAYTADQLFATLDPKVRRIVLP-GSSAMLADTVGFVRHLPHELVAAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL E EADLL+HV+D P EE V +VLQ +G E L ++ V+NKID
Sbjct: 268 RSTLSEAREADLLLHVIDAADPLREERIDQVDEVLQAIGAGE--LPQLL-VFNKID 320
>gi|28198002|ref|NP_778316.1| GTP-binding protein [Xylella fastidiosa Temecula1]
gi|182680628|ref|YP_001828788.1| GTP-binding proten HflX [Xylella fastidiosa M23]
gi|386084140|ref|YP_006000422.1| GTP-binding proten HflX [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|417557526|ref|ZP_12208562.1| GTPase [Xylella fastidiosa EB92.1]
gi|28056062|gb|AAO27965.1| GTP-binding protein [Xylella fastidiosa Temecula1]
gi|182630738|gb|ACB91514.1| GTP-binding proten HflX [Xylella fastidiosa M23]
gi|307579087|gb|ADN63056.1| GTP-binding proten HflX [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|338179922|gb|EGO82832.1| GTPase [Xylella fastidiosa EB92.1]
Length = 450
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 169/296 (57%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G ++ IK A++ G D I +N LS +Q+RNLE++ + V+DR GLI++IF
Sbjct: 56 TLLSSGKLKEIK---ETADATGA-DLILINHSLSPVQERNLEKSLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G RG
Sbjct: 112 AQRACSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRGGAIGLRG--- 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR + +R L ++ +V R R AR R + +A+VGYTN
Sbjct: 156 -PGETQLETDRRLLQKRVEQLQKRLSKVEVQRTQMRRARVRSE------VPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
+GKSTL +AL+ + ++ +LFATLDP+++ +VLP G +L+DTVGF+ LP +LV AF
Sbjct: 209 SGKSTLFNALTGASAYTANQLFATLDPKVRRIVLP-GSSAMLADTVGFVRHLPHELVAAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL E EADLL+HV+D P EE V +VLQ +G E L ++ V+NKID
Sbjct: 268 RSTLSEAREADLLLHVIDAADPLREERIDQVDEVLQAIGAGE--LPQLL-VFNKID 320
>gi|349610147|ref|ZP_08889506.1| GTP-binding protein HflX [Neisseria sp. GT4A_CT1]
gi|348610709|gb|EGY60394.1| GTP-binding protein HflX [Neisseria sp. GT4A_CT1]
Length = 396
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/319 (39%), Positives = 175/319 (54%), Gaps = 39/319 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVE----TIKCHINGAESKGELDAIFVNAILSGIQQRNL 168
+V + K KA F G G E +K H G A+F N L+ Q+RNL
Sbjct: 59 LVLRETAKRDKAHTAYFVGTGKAEELAAAVKLHDIGL-------AVF-NHELTPTQERNL 110
Query: 169 ERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETG 228
E+ VLDRVGLI+ IF A ++E KLQ ELA L + RLVR G
Sbjct: 111 EKILQCRVLDRVGLILAIFAKRAQSQEGKLQVELAQLNHLSGRLVR-------------G 157
Query: 229 EAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR 288
+ S +G G G + G GET+L+ RR I ++ + L Q+ +V++ RA +R +R
Sbjct: 158 YGHLQSQKG-GIG----LKGPGETQLETDRRLIGQKITALKKQLAQVKKQRATRRKSR-- 210
Query: 289 HGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVL 348
+GR L T A+VGYTNAGKS+L + L+ +D+ + +LFATLD + + L V+
Sbjct: 211 ---MEGR-LKTFAIVGYTNAGKSSLFNRLTKADVLAKDQLFATLDTTARRLFLSHEAGVI 266
Query: 349 LSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS 408
L+DTVGF+ DLP +LV AF ATLEE AD+L+HV+D + P+ E V VL+++G
Sbjct: 267 LTDTVGFVRDLPHKLVSAFSATLEETALADVLLHVVDASNPDFERQMDDVNVVLEEIGAH 326
Query: 409 EEKLKNMIEVWNKIDYHDE 427
E + V+NKID E
Sbjct: 327 EVP---QLVVYNKIDLLPE 342
>gi|416250649|ref|ZP_11637329.1| GTP-binding proten HflX [Moraxella catarrhalis CO72]
gi|326573980|gb|EGE23929.1| GTP-binding proten HflX [Moraxella catarrhalis CO72]
Length = 469
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 175/306 (57%), Gaps = 34/306 (11%)
Query: 123 KARADTFFGPGTVETI-----KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
K A F G G E I + ++ ++ IF N L+ Q+RNLE VL
Sbjct: 53 KPHAKYFVGTGKAEEIAEAVKRFRDTNDDNTDDVIVIF-NHTLTPSQERNLESLIKCRVL 111
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 112 DRTGLILDIFAQRARTHEGKLQVELAQLNHLATRLVR----------GWT-------HLE 154
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + L +++++V++TR RA R++ SD +
Sbjct: 155 RQKGGIG-LRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQK---SD---I 207
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
T+++VGYTNAGKSTL + L+D ++++ +LFATLDP L+ V P V+L+DTVGF+
Sbjct: 208 PTISLVGYTNAGKSTLFNRLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVR 267
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV++FHATLEE +EADLL+HV+D + ++ V VL+Q+ ++
Sbjct: 268 HLPHELVESFHATLEEALEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAP----ILL 323
Query: 418 VWNKID 423
V+NKID
Sbjct: 324 VFNKID 329
>gi|416155578|ref|ZP_11603990.1| GTP-binding proten HflX [Moraxella catarrhalis 101P30B1]
gi|416221129|ref|ZP_11625695.1| GTP-binding proten HflX [Moraxella catarrhalis 103P14B1]
gi|416247632|ref|ZP_11635815.1| GTP-binding proten HflX [Moraxella catarrhalis BC8]
gi|326565439|gb|EGE15611.1| GTP-binding proten HflX [Moraxella catarrhalis 103P14B1]
gi|326569444|gb|EGE19504.1| GTP-binding proten HflX [Moraxella catarrhalis BC8]
gi|326577052|gb|EGE26947.1| GTP-binding proten HflX [Moraxella catarrhalis 101P30B1]
Length = 469
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 175/306 (57%), Gaps = 34/306 (11%)
Query: 123 KARADTFFGPGTVETI-----KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
K A F G G E I + ++ ++ IF N L+ Q+RNLE VL
Sbjct: 53 KPHAKYFVGTGKAEEIAEAVKRFRDTNDDNTDDVIVIF-NHTLTPSQERNLESLIKCRVL 111
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 112 DRTGLILDIFAQRARTHEGKLQVELAQLNHLATRLVR----------GWT-------HLE 154
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + L +++++V++TR RA R++ SD +
Sbjct: 155 RQKGGIG-LRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQK---SD---I 207
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
T+++VGYTNAGKSTL + L+D ++++ +LFATLDP L+ V P V+L+DTVGF+
Sbjct: 208 PTISLVGYTNAGKSTLFNRLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVR 267
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP +LV++FHATLEE +EADLL+HV+D + ++ V VL+Q+ ++
Sbjct: 268 HLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAP----ILL 323
Query: 418 VWNKID 423
V+NKID
Sbjct: 324 VFNKID 329
>gi|150009872|ref|YP_001304615.1| GTP-binding protein HflX [Parabacteroides distasonis ATCC 8503]
gi|255012877|ref|ZP_05285003.1| GTP-binding protein HflX [Bacteroides sp. 2_1_7]
gi|256838419|ref|ZP_05543929.1| GTP-binding protein HflX [Parabacteroides sp. D13]
gi|262382852|ref|ZP_06075989.1| GTP-binding protein HflX [Bacteroides sp. 2_1_33B]
gi|298374226|ref|ZP_06984184.1| GTP-binding protein HflX [Bacteroides sp. 3_1_19]
gi|301312397|ref|ZP_07218313.1| GTP-binding protein HflX [Bacteroides sp. 20_3]
gi|410102191|ref|ZP_11297118.1| GTP-binding protein HflX [Parabacteroides sp. D25]
gi|423333725|ref|ZP_17311506.1| GTP-binding protein HflX [Parabacteroides distasonis CL03T12C09]
gi|423337157|ref|ZP_17314901.1| GTP-binding protein HflX [Parabacteroides distasonis CL09T03C24]
gi|149938296|gb|ABR44993.1| GTP-binding protein HflX [Parabacteroides distasonis ATCC 8503]
gi|256739338|gb|EEU52662.1| GTP-binding protein HflX [Parabacteroides sp. D13]
gi|262295730|gb|EEY83661.1| GTP-binding protein HflX [Bacteroides sp. 2_1_33B]
gi|298268594|gb|EFI10249.1| GTP-binding protein HflX [Bacteroides sp. 3_1_19]
gi|300829580|gb|EFK60234.1| GTP-binding protein HflX [Bacteroides sp. 20_3]
gi|409227035|gb|EKN19937.1| GTP-binding protein HflX [Parabacteroides distasonis CL03T12C09]
gi|409238345|gb|EKN31138.1| GTP-binding protein HflX [Parabacteroides distasonis CL09T03C24]
gi|409238913|gb|EKN31701.1| GTP-binding protein HflX [Parabacteroides sp. D25]
Length = 403
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 169/296 (57%), Gaps = 34/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q RN+E+ +LDR LI++IF
Sbjct: 62 TFVGTGKLQEIKEYV----VENEIGLVIFDDELSPKQLRNIEKELQVKILDRTSLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 ASRAQTAHAKTQVELAQYKYMLPRLTRLW-----------------THLERQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ +R IL++ + L ++ ++ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGETQLETDKRIILDKIARLKKELVDIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ LS S++F++ +LFATLD ++ V++ LLSDTVGFI LP +LV++F
Sbjct: 212 VGKSTLMNLLSKSEVFAENKLFATLDTTVRKVII-ENLPFLLSDTVGFIRKLPTELVESF 270
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL+EV EADLLVH++D + P EE V + L ++ +E K MI V+NK+D
Sbjct: 271 KSTLDEVREADLLVHIVDISHPTFEEQIEVVNRTLAEIDKTE---KPMIMVFNKVD 323
>gi|423460245|ref|ZP_17437042.1| GTP-binding protein HflX [Bacillus cereus BAG5X2-1]
gi|401140298|gb|EJQ47854.1| GTP-binding protein HflX [Bacillus cereus BAG5X2-1]
Length = 419
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|402566394|ref|YP_006615739.1| small GTP-binding protein [Burkholderia cepacia GG4]
gi|402247591|gb|AFQ48045.1| small GTP-binding protein [Burkholderia cepacia GG4]
Length = 391
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 178/333 (53%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 47 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 258
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKID
Sbjct: 259 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGADTIR---QVLVFNKIDA 315
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 316 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|24372195|ref|NP_716237.1| 50S ribosome assembly GTPase HflX [Shewanella oneidensis MR-1]
gi|24346104|gb|AAN53682.1| 50S ribosome assembly GTPase HflX [Shewanella oneidensis MR-1]
Length = 435
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/287 (41%), Positives = 168/287 (58%), Gaps = 28/287 (9%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
E + + N LS Q+RNLE+ VLDR LI++IF A T E KLQ ELA L +
Sbjct: 74 EANVVIFNHALSPAQERNLEQVCQCRVLDRTSLILDIFAQRARTHEGKLQVELAQLRHMS 133
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
+RLVR G T R GG G + G GET+L+ RR + R ++
Sbjct: 134 TRLVR----------GWTHLE-------RQKGGIG-LRGPGETQLETDRRLLRGRIKNIN 175
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
++E V + R R AR+R SD + TV++VGYTNAGKSTL +AL+ SD+++ +LF
Sbjct: 176 KRLERVDKQREQSRRARKR---SD---MPTVSLVGYTNAGKSTLFNALTSSDVYAADQLF 229
Query: 330 ATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 389
ATLDP L+ + LP G V+L+DTVGFI LP LV AF ATL+E +A+LL+H++DC
Sbjct: 230 ATLDPTLRKLDLPDG-AVILADTVGFIRHLPHDLVAAFKATLQETRQAELLLHIVDCADE 288
Query: 390 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 436
N+ ++ V VL+++ E + +I V NKID ++ +EY D
Sbjct: 289 NMADNFEQVQSVLKEIDADE--VMQLI-VCNKIDLLEDVTPRIEYDD 332
>gi|15242912|ref|NP_200604.1| GTP-binding protein, HflX [Arabidopsis thaliana]
gi|9758365|dbj|BAB08866.1| GTP binding protein-like [Arabidopsis thaliana]
gi|332009595|gb|AED96978.1| GTP-binding protein, HflX [Arabidopsis thaliana]
Length = 540
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 187/348 (53%), Gaps = 46/348 (13%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPV--LDRVGLIIE 185
T+ G G V IK IN + ++ + + LS Q RNLE+A+G V DR LI++
Sbjct: 167 TYIGSGKVAEIKSAINALD----VETVIFDDELSPGQLRNLEKAFGGDVRVCDRTALILD 222
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IFN A T EA LQ LA + Y+ RL R+ + R SGG+
Sbjct: 223 IFNQRAATHEAALQVALAQMEYQLPRLTRMW-----------------THLERQSGGQ-- 263
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GE ++++ +R + + L ++E VR+ R R+ R + V++VGY
Sbjct: 264 VKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRSRRV------AIPVPVVSLVGY 317
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL++ L+ +++ ++ RLFATLDP + V + +G++ LL+DTVGFI LP LV
Sbjct: 318 TNAGKSTLLNQLTGANVLAENRLFATLDPTTRRVQMQNGKEFLLTDTVGFIQKLPTTLVA 377
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF ATLEE+ E+ LLVHV+D + P E+ V +V+ ++ VS + ++ VWNK+D
Sbjct: 378 AFRATLEEIAESSLLVHVVDISHPLAEQQIEAVEKVMSELDVSS--IPKLV-VWNKVDRV 434
Query: 426 D---------EEMGD---VEYIDGDDISNFSRAEDKDTTSEPVDVECI 461
D EE GD + + G+ + +F A + V VE +
Sbjct: 435 DDPQKVKLEAEETGDTICISALTGEGLDDFCNAVHEKLKDSMVWVEAL 482
>gi|229815365|ref|ZP_04445700.1| hypothetical protein COLINT_02411 [Collinsella intestinalis DSM
13280]
gi|229809145|gb|EEP44912.1| hypothetical protein COLINT_02411 [Collinsella intestinalis DSM
13280]
Length = 429
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 172/304 (56%), Gaps = 30/304 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKP--VLDRVGLIIE 185
++ G G VE +K G + + D + + LS QQ LERA G+P V+DR LI++
Sbjct: 63 SYIGSGKVEELK----GFVQRLDADVVIFDDDLSPSQQSYLERALGEPTKVIDRTALILD 118
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF HA T+E +LQ +LA L Y L R+RG L A+ + GG G
Sbjct: 119 IFGLHARTREGRLQVQLAQLQYL---LPRLRGMWSHL------------AKEQTRGGIGS 163
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GE++L++ RR I R + L ++ EV + R VQ +++R+ R +A+ GY
Sbjct: 164 RFGQGESQLEIDRRMIRNRIAQLRHELREVEKRRDVQ--SKKRNDSQTFR----IALTGY 217
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKS+L++ L + + +LFATLDP +S+ LP GR V ++DTVGFI LP LV+
Sbjct: 218 TNAGKSSLLNQLCGPSVLAQDKLFATLDPTTRSLSLPGGRNVTITDTVGFIQKLPHGLVE 277
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
AF +TL EV +ADL++ V+D + + H V VL +VG +++ + V+NKID
Sbjct: 278 AFKSTLSEVRDADLILRVVDISDADYPRHVDAVEHVLDEVGAADQP---AVTVYNKIDRL 334
Query: 426 DEEM 429
D +
Sbjct: 335 DSSV 338
>gi|217967468|ref|YP_002352974.1| GTP-binding proten HflX [Dictyoglomus turgidum DSM 6724]
gi|217336567|gb|ACK42360.1| GTP-binding proten HflX [Dictyoglomus turgidum DSM 6724]
Length = 405
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 181/324 (55%), Gaps = 35/324 (10%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V VQN L G+ +F G +E +K + + D + N LS +Q RN+E+
Sbjct: 30 VKVQNVLLFGGEPDPASFLRSGKLEELKYLVMEQRA----DLVIFNNDLSPVQLRNIEKE 85
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI++IF HA +KE K+Q ELA L Y RL TG E
Sbjct: 86 IPARIVDRTMLILDIFAQHARSKEGKIQVELAQLEYLLPRL--------------TGRGE 131
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+S G G G G GET+L++ RR+I +R L ++EE++R R VQR R
Sbjct: 132 TLSRLGGGIGT----RGPGETKLEIDRRKIRKRIHTLKKELEEIKREREVQRKQRL---- 183
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
L +A+VGYTNAGKSTL + L+ +++ ++ LFATLDP ++ V + +VL+SD
Sbjct: 184 ----NLPQIALVGYTNAGKSTLFNLLTGANVRAEDLLFATLDPTVRKVNFKNNWEVLISD 239
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI +LP +L+ AF ATLEE+ DL++HV+D + + + V +L+ +G+ +
Sbjct: 240 TVGFIRNLPEELLTAFRATLEEIYYVDLILHVIDISDKDFRKQIEVVESILEDMGIED-- 297
Query: 412 LKNMIEVWNKIDYHDEEMGDVEYI 435
K +I V+NKID +E +V Y+
Sbjct: 298 -KTIIRVYNKIDLLSKE--EVRYL 318
>gi|423555401|ref|ZP_17531704.1| GTP-binding protein HflX [Bacillus cereus MC67]
gi|401196805|gb|EJR03743.1| GTP-binding protein HflX [Bacillus cereus MC67]
Length = 419
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 174/315 (55%), Gaps = 42/315 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++ A++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVKEADA----NMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ + L ++E + R QR R+++ + V++VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQIAALNKELEALVAQRQTQRKQRKKNE------IPVVSLVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST+++ + + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTIMNTMLEIFNGTVEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEV 418
LV AF +TLEEV EADLL+HV+D + PN E+ + L+++GV KN+ I
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYSNPNYEQLIDITNETLKKIGV-----KNIPTIYA 322
Query: 419 WNKIDYHDEEMGDVE 433
+NK D D E+ V+
Sbjct: 323 YNKSDLIDVEIPKVQ 337
>gi|339450963|ref|ZP_08654333.1| GTP-binding protein HflX [Leuconostoc lactis KCTC 3528]
Length = 432
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 170/308 (55%), Gaps = 39/308 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A E+D I N LS Q RNLE+ VLDR GLI++IF
Sbjct: 59 TYFGKGKVE----ELAEAAKTYEVDMIVANDELSPSQIRNLEKLTNTTVLDRTGLILDIF 114
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ +LA L Y+ RL R + + + + G+GG GF S
Sbjct: 115 AQRAQTKEAKLQVQLARLQYQLPRL--------RTSMSVSLDQQT------GAGGGGFTS 160
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G+GET+L+ RRRI + + ++ E+ + + + A R + LA VA+VGYT
Sbjct: 161 RGSGETKLEESRRRITSQMVRIRQELAELSKGTSTRSAKRTTNE------LANVALVGYT 214
Query: 307 NAGKSTLVSAL-------SDSD----LFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGF 355
NAGKSTL++ L +D+D + LFATL ++ + LP ++ LLSDTVGF
Sbjct: 215 NAGKSTLMNRLLARFGVGADTDDTKQVLEKDMLFATLTTTVRQLTLPDKKQFLLSDTVGF 274
Query: 356 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 415
+S LP LV AF +TL+E ADLL+ ++D + + ++ T + L +VGV++ M
Sbjct: 275 VSKLPHNLVSAFKSTLQEAANADLLLQIVDVSDEHYKDMMATTEKTLAEVGVTDVP---M 331
Query: 416 IEVWNKID 423
I V+NK D
Sbjct: 332 ITVYNKAD 339
>gi|350562403|ref|ZP_08931237.1| GTP-binding proten HflX [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349779345|gb|EGZ33691.1| GTP-binding proten HflX [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 456
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/270 (43%), Positives = 159/270 (58%), Gaps = 28/270 (10%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
IF N LS Q+RNLER VLDR GLI++IF A + E KLQ ELA L + +RLV
Sbjct: 80 IF-NHPLSPSQERNLERHLECRVLDRSGLILDIFAQRARSHEGKLQVELAQLRHMSTRLV 138
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
R G T R GG G + G GET+L+ RR + R H+ ++E
Sbjct: 139 R----------GWTHLE-------RQKGGIG-LRGPGETQLETDRRLLAARIKHIERRLE 180
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLD 333
+V+R+R R ARRR+ TVA+VGYTNAGKSTL + L+++ +++ +LFATLD
Sbjct: 181 KVQRSREQGRQARRRNE------TPTVALVGYTNAGKSTLFNCLTEAQVYAADQLFATLD 234
Query: 334 PRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEE 393
P L+ + L + V+L+DTVGF+ DLP +L+ AF ATL E EA LL+HV+D + P E
Sbjct: 235 PTLRRLDLAPHQSVILADTVGFVRDLPHELIAAFKATLTETREAALLLHVIDASDPEREA 294
Query: 394 HRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
H V VL ++G E + V+NKID
Sbjct: 295 HIEQVEDVLAEIGAGEVP---VWRVYNKID 321
>gi|229029571|ref|ZP_04185651.1| hypothetical protein bcere0028_16610 [Bacillus cereus AH1271]
gi|228731770|gb|EEL82672.1| hypothetical protein bcere0028_16610 [Bacillus cereus AH1271]
Length = 419
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|255066262|ref|ZP_05318117.1| GTP-binding protein HflX [Neisseria sicca ATCC 29256]
gi|255049472|gb|EET44936.1| GTP-binding protein HflX [Neisseria sicca ATCC 29256]
Length = 377
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 174/315 (55%), Gaps = 39/315 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVE----TIKCHINGAESKGELDAIFVNAILSGIQQRNL 168
+V + K KA F G G E +K H G A+F N L+ Q+RNL
Sbjct: 40 LVLRETAKRDKAHTAYFVGTGKAEELAAAVKLHDIGL-------AVF-NHELTPTQERNL 91
Query: 169 ERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETG 228
E+ VLDRVGLI+ IF A ++E KLQ ELA L + RLVR G
Sbjct: 92 EKILQCRVLDRVGLILAIFAKRAQSQEGKLQVELAQLNHLSGRLVR-------------G 138
Query: 229 EAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR 288
+ S +G G G + G GET+L+ RR I ++ + L Q+ +V++ RA +R +R
Sbjct: 139 YGHLQSQKG-GIG----LKGPGETQLETDRRLIGQKITALKKQLAQVKKQRATRRKSR-- 191
Query: 289 HGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVL 348
+GR L T A+VGYTNAGKS+L + L+ +D+ + +LFATLD + + L V+
Sbjct: 192 ---MEGR-LKTFAIVGYTNAGKSSLFNRLTKADVLAKDQLFATLDTTARRLFLSHEAGVI 247
Query: 349 LSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS 408
L+DTVGF+ DLP +LV AF ATLEE AD+L+HV+D + P+ E V VL+++G
Sbjct: 248 LTDTVGFVRDLPHKLVSAFSATLEETALADVLLHVVDASNPDFERQMDDVNVVLEEIGAH 307
Query: 409 EEKLKNMIEVWNKID 423
E + V+NKID
Sbjct: 308 EVP---QLVVYNKID 319
>gi|116689827|ref|YP_835450.1| small GTP-binding protein [Burkholderia cenocepacia HI2424]
gi|170733166|ref|YP_001765113.1| GTP-binding proten HflX [Burkholderia cenocepacia MC0-3]
gi|206560241|ref|YP_002231005.1| putative GTP-binding protein [Burkholderia cenocepacia J2315]
gi|116647916|gb|ABK08557.1| GTP-binding protein HflX [Burkholderia cenocepacia HI2424]
gi|169816408|gb|ACA90991.1| GTP-binding proten HflX [Burkholderia cenocepacia MC0-3]
gi|198036282|emb|CAR52178.1| putative GTP-binding protein [Burkholderia cenocepacia J2315]
Length = 395
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 181/333 (54%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 52 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 320
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|347536088|ref|YP_004843513.1| GTP-binding protein HflX [Flavobacterium branchiophilum FL-15]
gi|345529246|emb|CCB69276.1| GTP-binding protein HflX [Flavobacterium branchiophilum FL-15]
Length = 406
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 171/313 (54%), Gaps = 34/313 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ K K TF G G ++ I ++ + + I + LS QQ+N+ R
Sbjct: 45 VVKRFFQKMDKPNPKTFLGTGKIDEINLYV----KENNVSTIVFDDELSPSQQKNISRII 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR LI++IF A T A+ Q ELA +Y RL G T E
Sbjct: 101 DCKILDRTHLILDIFAQRAETSYARTQVELAQCIYLLPRL------SGMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + +R + L +I+ + + +VQR+ R
Sbjct: 149 -----RQKGGIG-MRGPGETEIETDRRIVRDRIALLKDKIKIIDKQMSVQRSNRG----- 197
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+ VA+VGYTN GKSTL++ + SD+F + +LFATLD ++ +V+ LLSDT
Sbjct: 198 ---AMVRVALVGYTNVGKSTLMNTVGKSDVFVENKLFATLDTTVRKIVI-KNLPFLLSDT 253
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI LP QL+D+F +TL+EV EADLL+HV+D P+ E+H +V Q+L ++ +
Sbjct: 254 VGFIRKLPTQLIDSFKSTLDEVREADLLLHVVDIAHPDFEDHIASVNQILAEIKCDD--- 310
Query: 413 KNMIEVWNKIDYH 425
K +I V+NKID +
Sbjct: 311 KPVIMVFNKIDAY 323
>gi|71728048|gb|EAO30257.1| Small GTP-binding protein domain [Xylella fastidiosa Ann-1]
Length = 450
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 169/296 (57%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G ++ IK A++ G D I +N LS +Q+RNLE++ + V+DR GLI++IF
Sbjct: 56 TLLSSGKLKEIK---ETADATGA-DLILINHSLSPVQERNLEKSLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G RG
Sbjct: 112 AQRACSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRGGAIGLRG--- 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR + +R L ++ +V R R AR R + +A+VGYTN
Sbjct: 156 -PGETQLETDRRLLQKRVEQLQKRLSKVEVQRTQMRRARVRSE------VPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
+GKSTL +AL+ + ++ +LFATLDP+++ +VLP G +L+DTVGF+ LP +LV AF
Sbjct: 209 SGKSTLFNALTGASAYTADQLFATLDPKVRRIVLP-GSSAMLADTVGFVRHLPHELVAAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL E EADLL+HV+D P EE V +VLQ +G E L ++ V+NKID
Sbjct: 268 RSTLSEAREADLLLHVIDAADPLREERIDQVDEVLQAIGAGE--LPQLL-VFNKID 320
>gi|78066576|ref|YP_369345.1| small GTP-binding protein [Burkholderia sp. 383]
gi|77967321|gb|ABB08701.1| GTP-binding protein HflX [Burkholderia sp. 383]
Length = 396
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 181/333 (54%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 52 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 320
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|365875684|ref|ZP_09415210.1| GTP-binding protein HflX [Elizabethkingia anophelis Ag1]
gi|442587450|ref|ZP_21006267.1| GTP-binding protein HflX [Elizabethkingia anophelis R26]
gi|365756529|gb|EHM98442.1| GTP-binding protein HflX [Elizabethkingia anophelis Ag1]
gi|442562891|gb|ELR80109.1| GTP-binding protein HflX [Elizabethkingia anophelis R26]
Length = 405
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 180/332 (54%), Gaps = 34/332 (10%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EE+ Y D F V + + K + + TF G G E I+ ++ + E+
Sbjct: 24 EEKLKEYMDELEFLAYTAGATVEKRFTQKMSQPDSKTFVGKGKAEEIRDYVK----ENEI 79
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
+ + LS Q +NLER +LDR LI++IF A T A+ Q ELA Y R
Sbjct: 80 GTVIFDDELSPSQLKNLERDIEVKILDRTNLILDIFAQRAQTSYARTQVELAQYEYLLPR 139
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L R+ + R GG G + G GETE++ RR I +R S L +
Sbjct: 140 LTRMW-----------------THLERQRGGIG-MRGPGETEIETDRRIIRDRISLLKDK 181
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
++ + R A QR R + + VA+VGYTN GKSTL+++LS S++F++ +LFAT
Sbjct: 182 LKTIDRQMATQRNNRGK--------MVRVALVGYTNVGKSTLMNSLSKSEVFAENKLFAT 233
Query: 332 LDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 391
LD ++ VV+ LL+DTVGFI LP QLV++F +TL+EV EADLL+HV+D + +
Sbjct: 234 LDTTVRKVVI-GNLPFLLTDTVGFIRKLPTQLVESFKSTLDEVREADLLIHVVDISHESF 292
Query: 392 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
E+H +V ++LQ++ + K ++ V+NKID
Sbjct: 293 EDHVNSVNEILQEIDAHK---KPVLMVFNKID 321
>gi|225863733|ref|YP_002749111.1| GTP-binding protein [Bacillus cereus 03BB102]
gi|225789762|gb|ACO29979.1| GTP-binding protein [Bacillus cereus 03BB102]
Length = 419
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|377564110|ref|ZP_09793437.1| GTP-binding protein HflX [Gordonia sputi NBRC 100414]
gi|377528743|dbj|GAB38602.1| GTP-binding protein HflX [Gordonia sputi NBRC 100414]
Length = 523
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 170/304 (55%), Gaps = 30/304 (9%)
Query: 128 TFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
TF G G + ++ + GA D + + L+ Q LE+ V+DR LI++
Sbjct: 141 TFIGSGKAQELRDVVADTGA------DTVICDGELTPAQLTALEKVVKVKVIDRTALILD 194
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR-GSGGRG 244
IF HA ++E K Q LA + Y L R+RG GE+ A GR GS G
Sbjct: 195 IFAQHASSREGKAQVALAQMEYM---LPRLRG---------WGESMSRQAGGRAGSNGGV 242
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GET+++ RRRI ER + L +I E+R R +R+AR R + +AV G
Sbjct: 243 GLRGPGETKIETDRRRIRERMAKLRREIREMRTARTTKRSARLRGA------VPRIAVAG 296
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLV 364
YTNAGKS+LV+A++ S + LFATLDP + L GR+++ +DTVGF+ LP QLV
Sbjct: 297 YTNAGKSSLVNAMTGSGVLVQDALFATLDPTTRRATLEDGRELVFTDTVGFVRHLPTQLV 356
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE--VWNKI 422
+AF +TLEEVV+ADL++HV+D + P E T V +V+ V V+EE + E V NKI
Sbjct: 357 EAFRSTLEEVVDADLVLHVVDGSDPFPAEQITAVRRVINDV-VAEEGVAPPPELLVINKI 415
Query: 423 DYHD 426
D D
Sbjct: 416 DAID 419
>gi|444357831|ref|ZP_21159315.1| GTP-binding protein HflX [Burkholderia cenocepacia BC7]
gi|444371757|ref|ZP_21171290.1| GTP-binding protein HflX [Burkholderia cenocepacia K56-2Valvano]
gi|443594656|gb|ELT63291.1| GTP-binding protein HflX [Burkholderia cenocepacia K56-2Valvano]
gi|443605521|gb|ELT73369.1| GTP-binding protein HflX [Burkholderia cenocepacia BC7]
Length = 390
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 181/333 (54%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 47 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 258
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 259 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 315
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 316 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|229172520|ref|ZP_04300079.1| hypothetical protein bcere0006_16320 [Bacillus cereus MM3]
gi|228610991|gb|EEK68254.1| hypothetical protein bcere0006_16320 [Bacillus cereus MM3]
Length = 419
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|254248076|ref|ZP_04941397.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
gi|124872852|gb|EAY64568.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
Length = 390
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 181/333 (54%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 47 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 258
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 259 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 315
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 316 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|83720345|ref|YP_442761.1| GTP-binding protein HflX [Burkholderia thailandensis E264]
gi|83654170|gb|ABC38233.1| GTP-binding protein HflX [Burkholderia thailandensis E264]
Length = 392
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 179/335 (53%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 52 AALFVGSGKAEELRLACEAN------DVEIVIFNHALAPAQQRNLERVLNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R G +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHHTQRRQRARSG------TMSVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 261
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ E V VL+++G + I V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIR---QILVFNKI 318
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E ++ D+ N SR T + +D
Sbjct: 319 DAVPELAARGGAVERDEYGNISRVFLSARTGQGLD 353
>gi|421482979|ref|ZP_15930558.1| GTP-binding proten HflX [Achromobacter piechaudii HLE]
gi|400198783|gb|EJO31740.1| GTP-binding proten HflX [Achromobacter piechaudii HLE]
Length = 368
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 155/272 (56%), Gaps = 27/272 (9%)
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D + + LS QQRNLER + V+DRV LI++IF A + E KLQ ELA L + +R
Sbjct: 68 DIVLFDQPLSPAQQRNLERVFNLRVVDRVALILDIFALRAKSHEGKLQVELAQLQHLSTR 127
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L R+ S R GG G + G GE++L++ RR I + L +
Sbjct: 128 LTRM-----------------WSHLERQRGGIG-MRGPGESQLEMDRRMIGAKVKTLRER 169
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
++ V R R QR AR R G +V++VGYTNAGKSTL +AL+ +D ++ +LFAT
Sbjct: 170 LDRVERQRVTQRRARARGGA------LSVSLVGYTNAGKSTLFNALTRADTYAADQLFAT 223
Query: 332 LDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 391
LD + + + V++SDTVGFI DLP L+ AF ATLEE V ADLL+HV+D +P
Sbjct: 224 LDTTTRRIWIEGAGNVVISDTVGFIRDLPHDLIAAFRATLEETVHADLLLHVVDAASPQR 283
Query: 392 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+E V +VL ++G S I V+NKID
Sbjct: 284 DEQIFEVNKVLAEIGASTVP---TILVYNKID 312
>gi|423403622|ref|ZP_17380795.1| GTP-binding protein HflX [Bacillus cereus BAG2X1-2]
gi|401647766|gb|EJS65369.1| GTP-binding protein HflX [Bacillus cereus BAG2X1-2]
Length = 419
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|339008302|ref|ZP_08640875.1| putative GTP-binding protein HflX [Brevibacillus laterosporus LMG
15441]
gi|421874334|ref|ZP_16305940.1| GTP-binding protein HflX [Brevibacillus laterosporus GI-9]
gi|338774102|gb|EGP33632.1| putative GTP-binding protein HflX [Brevibacillus laterosporus LMG
15441]
gi|372456765|emb|CCF15489.1| GTP-binding protein HflX [Brevibacillus laterosporus GI-9]
Length = 429
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 174/319 (54%), Gaps = 43/319 (13%)
Query: 112 VVVQNPSLKSGKARADT--FFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRN 167
V+ QN + R D+ + G G ++ I AE LD + N LS Q RN
Sbjct: 46 VITQN------RERVDSAWYLGTGKIQEI------AELAVSLDVDVVIFNDELSASQNRN 93
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE + V+DR LI++IF + A+++E K+Q ELA Y RL RL G
Sbjct: 94 LEALFECRVIDRTQLILDIFASRANSREGKIQVELAQYSYLLPRLAGQGNQMSRLGGGIG 153
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
GET+L+ RR I R S L Q++++ RTR + R R+
Sbjct: 154 TRG------------------PGETKLETDRRHIRRRISELKQQLDDIVRTRQLHRERRK 195
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKV 347
++ + +A+VGYTNAGKSTL++ L+ +D + +LFATLDP + + LPSG++V
Sbjct: 196 KNH------VYQIALVGYTNAGKSTLLNNLTKADTLQEDKLFATLDPTTRQLALPSGKEV 249
Query: 348 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 407
LL+DTVGFI DLP L+ AF +TLE V EADL++HV+DC+ P+ E H V QVL+ +
Sbjct: 250 LLTDTVGFIQDLPTALIAAFRSTLEGVQEADLILHVVDCSHPDFEVHMEVVDQVLK--DL 307
Query: 408 SEEKLKNMIEVWNKIDYHD 426
E + ++ V+NK D D
Sbjct: 308 EAEGIPRLV-VYNKADLLD 325
>gi|171321329|ref|ZP_02910288.1| GTP-binding proten HflX [Burkholderia ambifaria MEX-5]
gi|171093386|gb|EDT38574.1| GTP-binding proten HflX [Burkholderia ambifaria MEX-5]
Length = 396
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 178/333 (53%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 52 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGADTIR---QVLVFNKIDA 320
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|238022265|ref|ZP_04602691.1| hypothetical protein GCWU000324_02172 [Kingella oralis ATCC 51147]
gi|237866879|gb|EEP67921.1| hypothetical protein GCWU000324_02172 [Kingella oralis ATCC 51147]
Length = 377
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/311 (39%), Positives = 171/311 (54%), Gaps = 31/311 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + + K K F G G E + + + ++ + N LS Q+RNLER
Sbjct: 55 LVCSETSKRDKPHTALFVGTGKAEELADLVK----QHDIQLVIFNHELSPTQERNLERTL 110
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDRVGLI+ IF A ++E KLQ ELA L + SRLVR G +
Sbjct: 111 QCRVLDRVGLILAIFAQRAQSQEGKLQVELAQLTHLSSRLVR-------------GYGHL 157
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
S +G G G + G GET+L+ RR I + + L Q+ V++ R +R AR GS
Sbjct: 158 QSQKG-GIG----LKGPGETQLETDRRLIQTKITALKRQLANVKKQRETRRKARL--SGS 210
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
L T+A+VGYTNAGKSTL + L+ SD+F+ +LFATLD + + L ++LSDT
Sbjct: 211 ----LKTMAIVGYTNAGKSTLFNRLTKSDVFAKDQLFATLDTTARRLYLAPEASIILSDT 266
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGF+ DLP QLV AF ATLEE AD+L+H++D P E V VL + + +K+
Sbjct: 267 VGFVQDLPHQLVSAFSATLEETALADVLLHIVDAHDPEHERKIQDVNAVLAE--IKADKI 324
Query: 413 KNMIEVWNKID 423
+I V+NKID
Sbjct: 325 PQII-VYNKID 334
>gi|167581712|ref|ZP_02374586.1| GTP-binding protein HflX [Burkholderia thailandensis TXDOH]
gi|167619828|ref|ZP_02388459.1| GTP-binding protein HflX [Burkholderia thailandensis Bt4]
gi|257138971|ref|ZP_05587233.1| GTP-binding protein HflX [Burkholderia thailandensis E264]
Length = 387
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 179/335 (53%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 47 AALFVGSGKAEELRLACEAN------DVEIVIFNHALAPAQQRNLERVLNRRVVDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R G +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHHTQRRQRARSG------TMSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 256
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ E V VL+++G + I V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIR---QILVFNKI 313
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGGAVERDEYGNISRVFLSARTGQGLD 348
>gi|126172808|ref|YP_001048957.1| HSR1-like GTP-binding protein [Shewanella baltica OS155]
gi|153002272|ref|YP_001367953.1| GTP-binding protein HSR1-like [Shewanella baltica OS185]
gi|386339579|ref|YP_006035945.1| GTP-binding proten HflX [Shewanella baltica OS117]
gi|125996013|gb|ABN60088.1| GTP-binding protein, HSR1-related [Shewanella baltica OS155]
gi|151366890|gb|ABS09890.1| GTP-binding protein HSR1-related [Shewanella baltica OS185]
gi|334861980|gb|AEH12451.1| GTP-binding proten HflX [Shewanella baltica OS117]
Length = 435
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 166/287 (57%), Gaps = 28/287 (9%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
E + + N LS Q+RNLE+ VLDR LI++IF A T E KLQ ELA L +
Sbjct: 74 EANVVIFNHALSPAQERNLEQVCHCRVLDRTTLILDIFAQRARTHEGKLQVELAQLRHMS 133
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
+RL+R G T R GG G + G GET+L+ RR + R ++
Sbjct: 134 TRLIR----------GWTHLE-------RQKGGIG-LRGPGETQLETDRRLLRGRIKNIN 175
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
++E V + R R AR+R SD L+TV++VGYTNAGKSTL +AL+ SD+++ +LF
Sbjct: 176 KRLERVDKQREQSRRARKR---SD---LSTVSLVGYTNAGKSTLFNALTSSDVYAADQLF 229
Query: 330 ATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 389
ATLDP L+ + LP G V+L+DTVGFI LP LV AF ATL+E +A+LL+H++DC
Sbjct: 230 ATLDPTLRKLDLPDG-AVILADTVGFIRHLPHDLVAAFKATLQETRQAELLLHIIDCADE 288
Query: 390 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 436
N+ ++ V VL+ + E + V NKID ++ +EY D
Sbjct: 289 NMADNFDQVQSVLKDIEADEVM---QLVVCNKIDLLEDVTPRIEYND 332
>gi|218133163|ref|ZP_03461967.1| hypothetical protein BACPEC_01025 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992036|gb|EEC58040.1| GTP-binding protein HflX [[Bacteroides] pectinophilus ATCC 43243]
Length = 437
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 170/315 (53%), Gaps = 33/315 (10%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+QN T+ G G +E + C ++ + D I + LS Q +NLE
Sbjct: 53 VVIQNRE----AVHPGTYIGKGKIEELAC----LAAQYDADGIVCDDELSPAQLKNLEEE 104
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
VLDR +I++IF A A T E K+Q E+A L Y+ SRL G L+ G
Sbjct: 105 LNCKVLDRTLVILDIFAARASTSEGKIQVEMAQLKYRMSRLA---GLGLGLSMSRLGGGV 161
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
GE ++++ RR I +R + L S+++EV R R V R R++
Sbjct: 162 GTRG-------------PGEKKIEMDRRLIRDRIAQLKSELDEVVRHREVTRQQRKKTS- 207
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSD 351
+ A+VGYTNAGKSTL++ L+D+D+ S+ +LFATLDP + +VL +VLL+D
Sbjct: 208 -----MPVAAIVGYTNAGKSTLLNRLTDADVLSEDKLFATLDPTTRELVLTDKSRVLLTD 262
Query: 352 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 411
TVGFI LP L+DAF +TLEE AD++VHV+D + ++E V LQ++ V +
Sbjct: 263 TVGFIRKLPHHLIDAFRSTLEEARYADIIVHVVDASNDDMERQMEIVYDTLQELEVGD-- 320
Query: 412 LKNMIEVWNKIDYHD 426
K +I ++NK D D
Sbjct: 321 -KPVITLFNKCDMLD 334
>gi|385812716|ref|YP_005849107.1| GTP-binding protein HflX [Lactobacillus fermentum CECT 5716]
gi|299783613|gb|ADJ41611.1| GTP-binding protein HflX [Lactobacillus fermentum CECT 5716]
Length = 425
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 173/306 (56%), Gaps = 36/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G VE + AE ++ I N L+ Q NL A V+DR LI+E
Sbjct: 53 AATYFGKGKVEEL-TQFATAE---QVTTIIANDELTPSQLANLTEATKIRVIDRTALILE 108
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A ++EAK+Q ++A L Y RL R+ + +TG GG GF
Sbjct: 109 IFAQRAQSREAKIQVQIAQLQY---RLPRLHTAANQSLDQQTG------------GGAGF 153
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET++++ RR I ++ +HL ++++E+ ++ +RA R R + T A+VG
Sbjct: 154 ANRGSGETQIEMDRRVIQKQIAHLRNELKEIAKSEETKRAKRDRDT------IPTAALVG 207
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTNAGKST+++ L S+ +F LFATLD ++ + LP ++ LLSDTVGF+S
Sbjct: 208 YTNAGKSTIMNQLVERFGVSSEKKVFEKDMLFATLDTSVRQLTLPDQKRFLLSDTVGFVS 267
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP L++AF +TL E ADLL+ V+D + P+ EE T + L+Q+G+ E + M+
Sbjct: 268 KLPTHLIEAFKSTLAEAASADLLIQVIDYSDPHHEEMMATTDETLRQIGI--ENIP-MVY 324
Query: 418 VWNKID 423
V+NK D
Sbjct: 325 VFNKAD 330
>gi|288575669|ref|ZP_05977403.2| GTP-binding protein HflX [Neisseria mucosa ATCC 25996]
gi|288567459|gb|EFC89019.1| GTP-binding protein HflX [Neisseria mucosa ATCC 25996]
Length = 373
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 174/315 (55%), Gaps = 39/315 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVE----TIKCHINGAESKGELDAIFVNAILSGIQQRNL 168
+V + K KA F G G E +K H G A+F N L+ Q+RNL
Sbjct: 40 LVLRETAKRDKAHTAYFVGTGKAEELAAAVKLHDIGL-------AVF-NHELTPTQERNL 91
Query: 169 ERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETG 228
E+ VLDRVGLI+ IF A ++E KLQ ELA L + RLVR G
Sbjct: 92 EKILQCRVLDRVGLILAIFAKRAQSQEGKLQVELAQLNHLSGRLVR-------------G 138
Query: 229 EAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR 288
+ S +G G G + G GET+L+ RR I ++ + L Q+ +V++ RA +R +R
Sbjct: 139 YGHLQSQKG-GIG----LKGPGETQLETDRRLIGQKITALKKQLAQVKKQRATRRKSR-- 191
Query: 289 HGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVL 348
+GR L T A+VGYTNAGKS+L + L+ +D+ + +LFATLD + + L V+
Sbjct: 192 ---MEGR-LKTFAIVGYTNAGKSSLFNRLTKADVLAKDQLFATLDTTARRLFLSHEAGVI 247
Query: 349 LSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS 408
L+DTVGF+ DLP +LV AF ATLEE AD+L+HV+D + P+ E V VL+++G
Sbjct: 248 LTDTVGFVRDLPHKLVSAFSATLEETALADVLLHVVDASNPDFERQMDDVNVVLEEIGAH 307
Query: 409 EEKLKNMIEVWNKID 423
E + V+NKID
Sbjct: 308 EVP---QLVVYNKID 319
>gi|410659559|ref|YP_006911930.1| GTP-binding protein HflX [Dehalobacter sp. DCA]
gi|410662538|ref|YP_006914909.1| GTP-binding protein HflX [Dehalobacter sp. CF]
gi|409021914|gb|AFV03945.1| GTP-binding protein HflX [Dehalobacter sp. DCA]
gi|409024894|gb|AFV06924.1| GTP-binding protein HflX [Dehalobacter sp. CF]
Length = 601
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 165/298 (55%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
+ T GPG +E ++ I ++ D + + L+G QQR LE G VL R GLI++
Sbjct: 236 SSTIIGPGKLEELQQMIQTRQA----DLVIFDEELNGTQQRILEEKLGLKVLSRTGLILD 291
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF HA ++E LQ ELA L Y+ RL RL G
Sbjct: 292 IFAQHARSREGILQVELAQLEYRLPRLTGTGVALSRLGGGIGTRG--------------- 336
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GET+L+ RR I R +HL +++++RR R V R R+++ + +++VGY
Sbjct: 337 ---PGETKLETDRRHIRSRIAHLRERLDDIRRQRGVLRGNRQKNN------IPVLSIVGY 387
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL++AL SD+ ++ +LFATLDP + + L +G VLLSDTVGFI LP L+D
Sbjct: 388 TNAGKSTLLNALCGSDVLAEDKLFATLDPTTRKLPLNNGSTVLLSDTVGFIRRLPPNLLD 447
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF +TLEEVV +D ++ V D P +E+H V ++L ++G K + V NK+D
Sbjct: 448 AFKSTLEEVVLSDQILIVADAADPQVEDHIWIVDEILAELGAGS---KPTLIVLNKVD 502
>gi|423475748|ref|ZP_17452463.1| GTP-binding protein HflX [Bacillus cereus BAG6X1-1]
gi|402435618|gb|EJV67652.1| GTP-binding protein HflX [Bacillus cereus BAG6X1-1]
Length = 419
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 171/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N ++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVDA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|389700021|ref|ZP_10185133.1| GTP-binding protein HflX [Leptothrix ochracea L12]
gi|388591282|gb|EIM31539.1| GTP-binding protein HflX [Leptothrix ochracea L12]
Length = 401
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 184/371 (49%), Gaps = 49/371 (13%)
Query: 60 DPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSL 119
D PR LV F L+E LA S +LP V +
Sbjct: 10 DLPRALLVGVDFGGKAFFDPSLDELALLAES--------------AGDLP----VAKLTA 51
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K A F G G + IK + ++ + + L QQRNLE+ G VLDR
Sbjct: 52 KRRSVDAALFVGSGKADEIKALVQLHAAQ----CVIFDQPLGPAQQRNLEKHLGVEVLDR 107
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI+EIF A A + E KLQ ELA L Y +RLVR R + E V
Sbjct: 108 TMLILEIFAARARSHEGKLQVELAKLQYLSTRLVR------RWSHLERQRGGVGLR---- 157
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
G GET+++L RR I ER + ++ +V+R R QR AR R G +
Sbjct: 158 -------GGPGETQIELDRRMIAERIKAVKERLVKVKRQRGTQRKARERSG------VLR 204
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGR-KVLLSDTVGFISD 358
V++VGYTNAGKSTL +AL + +++ +LFATLD + + L R +V LSDTVGFI D
Sbjct: 205 VSLVGYTNAGKSTLFNALVKAHVYAADQLFATLDTTTRQLYLEEARARVSLSDTVGFIRD 264
Query: 359 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 418
LP LV+AF ATL+E +EAD+L+HV+D +P E V +VL +G +E I V
Sbjct: 265 LPHALVNAFQATLQEAMEADVLLHVVDAASPTWFEQVREVQRVLADIGAAE---VPQILV 321
Query: 419 WNKIDYHDEEM 429
+NK D DE +
Sbjct: 322 FNKQDLMDESL 332
>gi|304382175|ref|ZP_07364686.1| GTP-binding protein HflX [Prevotella marshii DSM 16973]
gi|304336773|gb|EFM02998.1| GTP-binding protein HflX [Prevotella marshii DSM 16973]
Length = 417
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 180/335 (53%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + Y D F + V V+ + K T+ G G +E IK +I + E++
Sbjct: 26 EAKTKEYLDELQFLADTAGAVTVKRFTQKLAAPSQVTYVGKGKLEEIKQYIIDREEAEHP 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E+ +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQMRNIEKELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL+R + L
Sbjct: 146 RLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRITLLKQ 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ R + QR R R + VA+VGYTN GKSTL++ +S S++F++ +LFA
Sbjct: 197 RLVEIDRQKTTQRKNRGR--------MIRVALVGYTNVGKSTLMNLISKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 390
TLD ++ VV+ LL+DTVGFI LP LV++F +TL+EV EAD+L+HV+D + P+
Sbjct: 249 TLDTTVRKVVI-ENLPFLLADTVGFIRKLPTDLVESFKSTLDEVREADMLLHVVDISHPD 307
Query: 391 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 425
EE V L+ +G SE K I V+NKID +
Sbjct: 308 FEEQIRVVENTLKDLGCSE---KPSIIVFNKIDAY 339
>gi|254252263|ref|ZP_04945581.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158]
gi|124894872|gb|EAY68752.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158]
Length = 391
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 181/333 (54%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++ + N L+ QQRNLERA + V+DR LI++
Sbjct: 47 AAMFIGSGKADELRL----ACDAHNVEIVIFNHALAPAQQRNLERALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 258
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 259 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 315
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 316 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|115351795|ref|YP_773634.1| small GTP-binding protein [Burkholderia ambifaria AMMD]
gi|115281783|gb|ABI87300.1| GTP-binding protein HflX [Burkholderia ambifaria AMMD]
Length = 396
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 178/333 (53%), Gaps = 32/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 52 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQLV 364
TNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 365 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 424
AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGADTIR---QVLVFNKIDA 320
Query: 425 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|229160831|ref|ZP_04288822.1| hypothetical protein bcere0009_16210 [Bacillus cereus R309803]
gi|228622679|gb|EEK79514.1| hypothetical protein bcere0009_16210 [Bacillus cereus R309803]
Length = 419
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 170/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N + + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVNA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|170729308|ref|YP_001774741.1| GTP-binding protein [Xylella fastidiosa M12]
gi|167964101|gb|ACA11111.1| GTP-binding protein [Xylella fastidiosa M12]
Length = 450
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 169/296 (57%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G ++ IK A++ G D I +N LS +Q+RNLE++ + V+DR GLI++IF
Sbjct: 56 TLISSGKLKEIK---ETADATGA-DLILINHSLSPVQERNLEKSLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G RG
Sbjct: 112 AQRACSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRGGAIGLRG--- 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR + +R L ++ +V R R AR R + +A+VGYTN
Sbjct: 156 -PGETQLETDRRLLQKRVEQLQKRLSKVEVQRTQMRRARVRSE------VPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
+GKSTL +AL+ + ++ +LFATLDP+++ +VLP G +L+DTVGF+ LP +LV AF
Sbjct: 209 SGKSTLFNALTGASAYTADQLFATLDPKVRRIVLP-GSSAMLADTVGFVRHLPHELVAAF 267
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TL E EADLL+HV+D P EE V +VLQ +G E L ++ V+NKID
Sbjct: 268 RSTLSEAREADLLLHVIDAADPLREERIDQVDEVLQAIGAGE--LPQLL-VFNKID 320
>gi|424904617|ref|ZP_18328127.1| GTP-binding protein HflX [Burkholderia thailandensis MSMB43]
gi|390930595|gb|EIP87997.1| GTP-binding protein HflX [Burkholderia thailandensis MSMB43]
Length = 381
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 178/335 (53%), Gaps = 36/335 (10%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 41 AAMFVGSGKAEELRLACEAN------DVEIVIFNHALAPAQQRNLERMLNRRVVDRTSLI 94
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 95 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 137
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++ +RR QR R R G +V++V
Sbjct: 138 G-LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHHTQRRQRARSGA------MSVSLV 190
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGRKVLLSDTVGFISDLPLQ 362
GYTNAGKSTL +AL+ + ++ +LFATLD + V L ++++SDTVGFI +LP Q
Sbjct: 191 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 250
Query: 363 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 422
LV AF ATLEE + ADLL+HV+D ++ E V VL+++G + + V+NKI
Sbjct: 251 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIR---QVLVFNKI 307
Query: 423 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 457
D E ++ D+ N SR T + +D
Sbjct: 308 DAVPELAARGGAVERDEYGNISRVFLSARTGQGLD 342
>gi|423524285|ref|ZP_17500758.1| GTP-binding protein HflX [Bacillus cereus HuA4-10]
gi|401170128|gb|EJQ77369.1| GTP-binding protein HflX [Bacillus cereus HuA4-10]
Length = 419
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 174/313 (55%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++ A++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVKEADA----NMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ + L ++E + R QR R+++ + V++VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQIAALNKELEALVAQRQTQRKQRKKNE------VPVVSLVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST+++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTIMNAMLEIFNGTVEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D + PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYSNPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|323141020|ref|ZP_08075926.1| GTP-binding protein HflX [Phascolarctobacterium succinatutens YIT
12067]
gi|322414468|gb|EFY05281.1| GTP-binding protein HflX [Phascolarctobacterium succinatutens YIT
12067]
Length = 610
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 170/295 (57%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V+ + ++ + +D + LS QQRN+E++ G VLDR LI++IF
Sbjct: 245 FIGRGKVQELALYVQ----QENVDLCIFDDELSPAQQRNIEQSMGVRVLDRTALILDIFA 300
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
AHT E KLQ ELA L Y R++ RL G
Sbjct: 301 QRAHTNEGKLQVELAQLQYTLPRIMGKGLALSRLGGGIGTRGPG---------------- 344
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
ET+L++ RRRI +R +++ I +V+ R + RA R + + TV++VGYTNA
Sbjct: 345 --ETKLEVDRRRIRDRIAYIKECIGKVKSVRTLHRAGRAKAS------VPTVSLVGYTNA 396
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL++ L++SD+++ +LFATLDP + + LP+ ++ +L+DTVGFI LP QLV AF
Sbjct: 397 GKSTLLNTLTNSDIYAQDQLFATLDPTTRQLDLPNKQQAILTDTVGFIQRLPHQLVAAFQ 456
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
+TLEEVV++D+L+HV+D + +E V QVL ++G + K +I V+NKID
Sbjct: 457 STLEEVVQSDVLLHVIDVSHELYKEQAAAVYQVLDELGAKD---KTIITVYNKID 508
>gi|126666952|ref|ZP_01737928.1| GTPase [Marinobacter sp. ELB17]
gi|126628668|gb|EAZ99289.1| GTPase [Marinobacter sp. ELB17]
Length = 432
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 171/299 (57%), Gaps = 31/299 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I+ + AE+ L N LS Q+RN+ER VLDR G+I++IF
Sbjct: 57 FVGDGKLEEIRAAVAAAEADVVL----FNHSLSPSQERNIERELQCRVLDRTGVILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLQHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER + ++E+VRR R R AR R L TV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRERIKSINKRLEKVRRQRDQGRRARVRAD------LPTVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAFH 368
GKSTL + ++ SD+++ +LFATLDP ++ + LP V+L+DTVGFI LP +LV++F
Sbjct: 209 GKSTLFNRITSSDVYTADQLFATLDPTMRRLELPDIGAVILADTVGFIRHLPHKLVESFR 268
Query: 369 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
ATLEE EA LL+HV+DC +++ V VL ++G E +++V+NK D D+
Sbjct: 269 ATLEETNEAALLLHVIDCHDERRDDNIAQVENVLAEIGADEVP---VLQVFNKTDLLDD 324
>gi|399002323|ref|ZP_10705011.1| GTP-binding protein HflX [Pseudomonas sp. GM18]
gi|398125098|gb|EJM14587.1| GTP-binding protein HflX [Pseudomonas sp. GM18]
Length = 433
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 170/298 (57%), Gaps = 31/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T G VE ++ + + +D + N IL+ Q+RNLER + V+DR GLI++
Sbjct: 55 AKTLISSGKVEELRDLVKAEQ----VDLVIFNHILTPSQERNLERIFECRVIDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L Y +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEYMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++E+VR R R R+R + TV++VGY
Sbjct: 153 LRGPGETQLETDRRLLRIRLRQIKGRLEKVRSQREQSRRGRKRAD------IPTVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVD 365
TNAGKSTL ++++DSD+F+ +LFATLDP L+ + L ++L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNSVTDSDVFAANQLFATLDPTLRRLELEDLGPIVLADTVGFIRHLPHKLVE 266
Query: 366 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
AF ATLEE +DLL+HV+D P+ V+ VL ++G + ++EV+NK+D
Sbjct: 267 AFRATLEESSNSDLLLHVIDAHEPDRMAQIEQVMVVLGEIGAQD---LPILEVYNKLD 321
>gi|313886207|ref|ZP_07819937.1| GTP-binding protein HflX [Porphyromonas asaccharolytica
PR426713P-I]
gi|332299693|ref|YP_004441614.1| GTP-binding protein HflX [Porphyromonas asaccharolytica DSM 20707]
gi|312924386|gb|EFR35165.1| GTP-binding protein HflX [Porphyromonas asaccharolytica
PR426713P-I]
gi|332176756|gb|AEE12446.1| GTP-binding protein HflX [Porphyromonas asaccharolytica DSM 20707]
Length = 411
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/361 (34%), Positives = 195/361 (54%), Gaps = 49/361 (13%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ I +++ E AIF + L+ Q RN+ER G +LDR LI++IF
Sbjct: 62 TFVGKGKLDEIAEYVSAHEVGL---AIFDDE-LAPNQLRNIERQLGIRILDRTSLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q E+A Y RL R+ + R GG +
Sbjct: 118 ATRAQTAHAKTQVEMAQYQYMLPRLTRL-----------------WTHLERQRGGNIGLR 160
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR IL + S L Q++++ + ++VQR R + + VA+VGYTN
Sbjct: 161 GPGETQLETDRRIILRKISQLKEQLKKIDKQKSVQRQNRGK--------MVRVALVGYTN 212
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLPLQLVDAF 367
GKSTL++ L+ SD+F++ +LFATLD ++ VVL LL+DTVGFI LP QLV++F
Sbjct: 213 VGKSTLMNVLAKSDIFAENKLFATLDTTVRKVVL-GNLPFLLADTVGFIRKLPTQLVESF 271
Query: 368 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 427
+TL+EV E+DL++HV+D + P E+ V + L+++ +K + I V+NKID +
Sbjct: 272 KSTLDEVRESDLILHVVDISHPEFEDQIAVVTETLREIEALGDKPQ--ILVFNKIDAY-- 327
Query: 428 EMGDVEYI--DGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMN 485
++I D DD++ ++ + T E ++ + G D F+S GE M+
Sbjct: 328 -----QHIPKDPDDLTPATKL---NRTREELEKSWMARMGNDCV-----FISARTGEGMD 374
Query: 486 K 486
+
Sbjct: 375 E 375
>gi|423472241|ref|ZP_17448984.1| GTP-binding protein HflX [Bacillus cereus BAG6O-2]
gi|402429096|gb|EJV61186.1| GTP-binding protein HflX [Bacillus cereus BAG6O-2]
Length = 419
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 174/315 (55%), Gaps = 42/315 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++ A++ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVKEADA----NMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ + L ++E + R QR R+++ + V++VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQIAALNKELEALVAQRQTQRKQRKKNE------VPVVSLVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST+++ + + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTIMNTMLEIFNGTVEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEV 418
LV AF +TLEEV EADLL+HV+D + PN E+ + L+++GV KN+ I
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYSNPNYEQLIDITNETLKKIGV-----KNIPTIYA 322
Query: 419 WNKIDYHDEEMGDVE 433
+NK D D E+ V+
Sbjct: 323 YNKSDLIDVEIPKVQ 337
>gi|373461393|ref|ZP_09553133.1| GTP-binding protein HflX [Prevotella maculosa OT 289]
gi|371952351|gb|EHO70190.1| GTP-binding protein HflX [Prevotella maculosa OT 289]
Length = 415
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 194/365 (53%), Gaps = 22/365 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGELDAIFV 156
Y D F + V V+ + K A T+ G G +E IK +I + AE++ + +
Sbjct: 32 YLDELEFLADTAGAVTVRRFTQKVNGPSAVTYVGKGKLEEIKQYIEDCAENEEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQIRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRITLLKQRLLEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R L V++VGYTN GKST+++ LS S++F++ +LFATLD +
Sbjct: 203 KQKTTQRKNRGR--------LIRVSLVGYTNVGKSTIMNLLSKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGRKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRT 396
+ VV+ LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVI-ENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDLSHPDFEEQIQ 313
Query: 397 TVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPV 456
V + L +G +E+ +MI V+NKID + D + + + N + + K T +
Sbjct: 314 VVERTLADLGCNEK--PSMI-VFNKIDNYRWTEKDEDDLTPETRENITLEDLKKTWMARL 370
Query: 457 DVECI 461
D C+
Sbjct: 371 DESCM 375
>gi|118477292|ref|YP_894443.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam]
gi|196045037|ref|ZP_03112270.1| GTP-binding protein [Bacillus cereus 03BB108]
gi|229184063|ref|ZP_04311275.1| hypothetical protein bcere0004_16300 [Bacillus cereus BGSC 6E1]
gi|376265715|ref|YP_005118427.1| GTP-binding protein [Bacillus cereus F837/76]
gi|118416517|gb|ABK84936.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam]
gi|196024039|gb|EDX62713.1| GTP-binding protein [Bacillus cereus 03BB108]
gi|228599414|gb|EEK57022.1| hypothetical protein bcere0004_16300 [Bacillus cereus BGSC 6E1]
gi|364511515|gb|AEW54914.1| GTP-binding protein [Bacillus cereus F837/76]
Length = 419
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 170/313 (54%), Gaps = 38/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N + + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVNA----NMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFISDLP 360
AGKST ++A+ + +F LFATL+ ++++ LP + LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 361 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 420
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 421 KIDYHDEEMGDVE 433
K D D E+ V+
Sbjct: 325 KSDMVDVEIPKVQ 337
>gi|410594705|ref|YP_006951432.1| GTPase HflX [Streptococcus agalactiae SA20-06]
gi|421531971|ref|ZP_15978346.1| hypothetical protein M3M_02960 [Streptococcus agalactiae
STIR-CD-17]
gi|403642871|gb|EJZ03677.1| hypothetical protein M3M_02960 [Streptococcus agalactiae
STIR-CD-17]
gi|410518344|gb|AFV72488.1| GTPase HflX [Streptococcus agalactiae SA20-06]
Length = 412
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/316 (36%), Positives = 169/316 (53%), Gaps = 41/316 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K K + +F G G +E IK + E+D + VN L+ Q NLE
Sbjct: 42 VVNHYYQKRDKYDSKSFIGSGKLEEIKAIVEA----DEIDTVVVNNCLTPRQNSNLEAEL 97
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR+ LI++IF A + E KLQ LA L Y RLV G+ +
Sbjct: 98 GVKVIDRMQLILDIFAMRARSHEGKLQVHLAQLKYMLPRLV--------------GQGIM 143
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+S + G G RG GE++L+L RR I + S + Q++ V + R R RR +
Sbjct: 144 LSRQAGGIGSRG----PGESQLELNRRSIRHQISDIERQLKIVEKNRETVR--ERRVDST 197
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDT 352
+ + ++GYTNAGKST+++ L+D + LFATLD K + L + +V L+DT
Sbjct: 198 TFK----IGLIGYTNAGKSTIMNVLTDDKQYEANELFATLDATTKQIYLQNQFQVTLTDT 253
Query: 353 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 412
VGFI DLP +LV AF +TLEE DLL+HV+D + PN EEH V+++L+ +
Sbjct: 254 VGFIQDLPTELVAAFKSTLEESRHVDLLLHVIDASDPNHEEHEKVVMEILKDL------- 306
Query: 413 KNMIE-----VWNKID 423
+MI+ ++NK+D
Sbjct: 307 -DMIDIPRLAIYNKMD 321
>gi|184156130|ref|YP_001844470.1| GTPase [Lactobacillus fermentum IFO 3956]
gi|183227474|dbj|BAG27990.1| GTPase [Lactobacillus fermentum IFO 3956]
Length = 425
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 171/306 (55%), Gaps = 36/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G VE + ++ I N L+ Q NL A V+DR LI+E
Sbjct: 53 AATYFGKGKVEELTQFTTAEQAT----TIIANDELTPSQLANLTEATKIRVIDRTALILE 108
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A ++EAK+Q ++A L Y RL R+ + +TG GG GF
Sbjct: 109 IFAQRAQSREAKIQVQIAQLQY---RLPRLHTAANQSLDQQTG------------GGAGF 153
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET++++ RR I ++ +HL ++++E+ ++ +RA R R + T A+VG
Sbjct: 154 ANRGSGETQIEMDRRVIQKQIAHLRNELKEIAKSEETKRAKRDRDT------IPTAALVG 207
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGRKVLLSDTVGFIS 357
YTNAGKST+++ L S+ +F LFATLD ++ + LP ++ LLSDTVGF+S
Sbjct: 208 YTNAGKSTIMNQLVERFGVSSEKKVFEKDMLFATLDTSVRQLTLPDQKRFLLSDTVGFVS 267
Query: 358 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 417
LP L++AF +TL E ADLL+ V+D + P+ EE T + L+Q+G+ E + M+
Sbjct: 268 KLPTHLIEAFKSTLAEAASADLLIQVIDYSDPHHEEMMATTDETLRQIGI--ENIP-MVY 324
Query: 418 VWNKID 423
V+NK D
Sbjct: 325 VFNKAD 330
>gi|449126622|ref|ZP_21762905.1| GTP-binding protein HflX [Treponema denticola SP33]
gi|448946454|gb|EMB27312.1| GTP-binding protein HflX [Treponema denticola SP33]
Length = 391
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/353 (37%), Positives = 178/353 (50%), Gaps = 44/353 (12%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPP---HVVVQNPSLKSGKARADTFFGPG 133
LQ K EAL +EE+ F K L + +NP+ T G G
Sbjct: 33 LQEKSAEAL---KEIEEKELKSLIETIFLKPLSSLRFRIAKENPA---------TLVGSG 80
Query: 134 TVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHT 193
+E I I E +G D + N+ +S QRNLE A V+DR +II+IF A T
Sbjct: 81 QLEKIAQAI---EEEGA-DLVVFNSAVSPRIQRNLEAALNTCVIDRSEVIIQIFADRAQT 136
Query: 194 KEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETE 253
+EA LQAELA L Y RL R R T + RG G RG GAGE +
Sbjct: 137 REAVLQAELARLEYSMPRLTR------RWT-------SLAQQRGGAKGTRGASRGAGEKK 183
Query: 254 LQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTL 313
L+L RRR+ + L ++E VR R QR R G A+VGYTNAGKS+L
Sbjct: 184 LELDRRRLKTEIAKLKKEVERVRLQRTEQRKTRLNADKKIG------AIVGYTNAGKSSL 237
Query: 314 VSALSDSDLFSDARLFATLDPRLKSVVLPSGRK---VLLSDTVGFISDLPLQLVDAFHAT 370
+ LS +++F++ +LFATLD + V L + K +LL+DTVGF+S+LP QL+DAF +T
Sbjct: 238 LKKLSGAEVFTEDKLFATLDAETRKVFLQTDEKNIQILLTDTVGFVSNLPHQLIDAFRST 297
Query: 371 LEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 423
LEE AD L+ V D P + E +VL ++ S K I NK+D
Sbjct: 298 LEEAALADFLIIVCDAAHPAMPECLEVTKKVLDELSCSN---KPAIIAINKMD 347
>gi|291613888|ref|YP_003524045.1| GTP-binding proten HflX [Sideroxydans lithotrophicus ES-1]
gi|291584000|gb|ADE11658.1| GTP-binding proten HflX [Sideroxydans lithotrophicus ES-1]
Length = 380
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 181/325 (55%), Gaps = 42/325 (12%)
Query: 114 VQNPSLKSGKAR---ADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNL 168
V+ +L GK + A F G G VE I + EL+A + N LS Q RNL
Sbjct: 39 VRTLALVEGKRQRPDASMFAGSGKVEEIAALVE------ELEAPLVIFNHDLSPAQMRNL 92
Query: 169 ERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETG 228
V+DR LI++IF A + E K+Q ELA L Y +RLV + G+ F
Sbjct: 93 AAKIQTRVIDRTMLILDIFALRAQSHEGKVQVELAQLKYLSTRLVGMNMDMGQQKFA--- 149
Query: 229 EAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ-IEEVRRTRAVQRAARR 287
V ARG GET+L+L RR+ L+RR HLL++ +++++R R +QR AR
Sbjct: 150 ----VGARG-----------PGETQLELDRRK-LDRRVHLLNERLKQLKRHRELQRKARN 193
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP--SGR 345
R SD + +V++VGYTNAGKSTL + L++++++ +LFATLD + + L S R
Sbjct: 194 R---SD---VMSVSIVGYTNAGKSTLFNRLTNANVYVANQLFATLDTTARKIFLEGDSHR 247
Query: 346 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 405
+V+LSDTVGFI LP LV AF +TLEE +ADLL+HV+D +P + V +VL ++
Sbjct: 248 QVVLSDTVGFIRHLPHGLVAAFRSTLEETAQADLLLHVVDVNSPERHDQVAEVNKVLAEI 307
Query: 406 GVSEEKLKNMIEVWNKIDYHDEEMG 430
G I V+NKID E G
Sbjct: 308 GAQHIP---QIVVYNKIDLQGLEAG 329
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,622,956,253
Number of Sequences: 23463169
Number of extensions: 435246961
Number of successful extensions: 1341622
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4930
Number of HSP's successfully gapped in prelim test: 4767
Number of HSP's that attempted gapping in prelim test: 1318975
Number of HSP's gapped (non-prelim): 15257
length of query: 597
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 449
effective length of database: 8,886,646,355
effective search space: 3990104213395
effective search space used: 3990104213395
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)