BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007584
(597 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255557483|ref|XP_002519772.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223541189|gb|EEF42745.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 570
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 342/600 (57%), Positives = 418/600 (69%), Gaps = 35/600 (5%)
Query: 1 MIATEAVITKKKLKIKFGSQRIEAVPGSQPCEYGQQQSHVENWRHSSSVAESNQLMMSKP 60
MI+TE V+ KK LKIKF S +I+ + C+ + +VE HS
Sbjct: 1 MISTEPVVAKK-LKIKFSSHKIDTISVKNACDMAR---NVEKNYHS-------------- 42
Query: 61 YRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM 120
++ E+ K++ + KR +++EG + K+ KMDRGV HQC+ ++KSLM
Sbjct: 43 -------QVCDIENMKQKLTECSAIKRGPSDMVEGQQQKKRKMDRGVIHQCTSLVKSLMN 95
Query: 121 HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
HP GWVF PVDP KL+IPDYFS+I+ PMDLGTVK++L+ N Y ++EF ADVRLTFSNA
Sbjct: 96 HPCGWVFKEPVDPEKLEIPDYFSVITNPMDLGTVKSKLENNQYFGAEEFAADVRLTFSNA 155
Query: 181 MLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVNDTRQNCP 240
+LYNPP N VHKMA++L +F+ +WK+LEEKW+ ++ K G GK + + EV DTRQ CP
Sbjct: 156 LLYNPPLNYVHKMAEKLKKIFETRWKALEEKWNYQIAKDGDGKPFNARPKEVGDTRQKCP 215
Query: 241 KTPPLHSTLSSKKSKMSEEKAARSSYCARAVEVERAKPAQNLSSKLVIKNLHKGTNDGGR 300
+TPPLH K+SK SE K R S RA EV+ +KPA+N +S+ + +N +KGT++GGR
Sbjct: 216 QTPPLHKAELPKRSKPSEVKLLRGSSNVRAAEVKLSKPAENCNSEELRQNSYKGTDNGGR 275
Query: 301 LACNIVNAKPPLSPVACKSCGKCGSATCGCNLPSDSTHASSDITSERSLGGDR-ACSTDA 359
AC VN KP V K CG CG + C C LPSDS ASSDI+SE+S G D ACSTD
Sbjct: 276 NACGSVNVKPSSVSVVSK-CGTCGRSACQCILPSDSAQASSDISSEKSWGKDHHACSTDT 334
Query: 360 SKPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDV 419
SK D Q K S QMSKSDPDSDGAVSALD+ N+CPSSQL PATD+ S E W P+ DV
Sbjct: 335 SKMDVQGKCMSMLQMSKSDPDSDGAVSALDEENICPSSQLMTPATDANSVEGWRPPIFDV 394
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
Q+SP KALRAAMLK RFADTILKAQ +TLLDHGDKADPVKLQ+EKERLE+RQ EEKARIE
Sbjct: 395 QLSPTKALRAAMLKRRFADTILKAQHKTLLDHGDKADPVKLQEEKERLEKRQLEEKARIE 454
Query: 480 AQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCCL 539
AQI+AAEAASR + EIEL+KQREKEREAARVALQKME+T EIE NLEI+KELE LSGC L
Sbjct: 455 AQIRAAEAASRKREEIELRKQREKEREAARVALQKMEKTAEIEQNLEIVKELEKLSGCSL 514
Query: 540 SPHL---LNGSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDEEILNLDGDGEEGEIF 596
S G E + AH + LER+GL MK D + +D+EIL GD EEGEIF
Sbjct: 515 SYSYSFGRRGPEIAEGDVGGAHSCSLLERLGLIMKDDTV---DDDEILI--GDEEEGEIF 569
>gi|224061031|ref|XP_002300324.1| global transcription factor group [Populus trichocarpa]
gi|222847582|gb|EEE85129.1| global transcription factor group [Populus trichocarpa]
Length = 564
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 327/601 (54%), Positives = 410/601 (68%), Gaps = 43/601 (7%)
Query: 1 MIATEAVITKKKLKIKFGSQRIEAVPGSQPCEYGQQQSHVENWRHSSSVAESNQLMMSKP 60
MIA+ +T KKL IK SQRI+A+PG + G +QS S+S+ E++ M+K
Sbjct: 1 MIAS-GNVTMKKLTIKIASQRIQAIPGKKL--LGAEQSC------SASMGENHGSQMTK- 50
Query: 61 YRSSGGKKMIASEHSKERSSILPFN-KRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM 119
+ S+ P + KR E+IE + KR KMDR VT QCS +LKSLM
Sbjct: 51 -----------------QKSVAPVSRKRGPPEMIECQQQKRQKMDRSVTQQCSSLLKSLM 93
Query: 120 MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSN 179
HPAGWVFN+PVDPV L IPDYF++IS PMDLGTVK++L +N Y+ +EF AD+RLTFSN
Sbjct: 94 AHPAGWVFNKPVDPVALKIPDYFTVISNPMDLGTVKSKLGKNFYASINEFAADIRLTFSN 153
Query: 180 AMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVNDTRQNC 239
AMLYNPP NNVH+MA+ELN +F+ WK+LEE W+ E PK G GKI SG ++ + +QNC
Sbjct: 154 AMLYNPPSNNVHRMAEELNGIFETGWKALEENWNHEGPKFGSGKISSGCTTQIVNAKQNC 213
Query: 240 PKTPPLHSTLSSKKSKMSEEKAARSSYCARAV-EVERAKPAQNLSSKLVIKNLHKGTNDG 298
P +H T K+SK S+E R+ A + E + KPA+ K ++ N +KG + G
Sbjct: 214 LSMPSMHCTTLPKRSKTSKENVIRNLSNASVITEAKPTKPAE--MRKSLVPNSYKGADGG 271
Query: 299 GRLACNIVNAKPPLSPVACKSCGKCGSATCGCNLPSDSTHASSDITSERSLGGDR-ACST 357
GR AC N KP L PVA +CGKCGS C C+L DS H +SDI+SERS G D+ ACST
Sbjct: 272 GRHACGSTNVKPLLIPVA-SNCGKCGSNACRCSLQIDSYHTNSDISSERSSGRDQHACST 330
Query: 358 DASKPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLL 417
D SK K +Q SKSDPDSD AVSALDD N+CP SQLT PATD+AS EE ++ L
Sbjct: 331 DTSK---LAKIMPATQSSKSDPDSDEAVSALDDENICPGSQLTTPATDAASGEELSS-LF 386
Query: 418 DVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKAR 477
V +SP KALR A +K RFADTILKAQ + +LD+GDKADP+K++Q KERLE+RQ+EEKAR
Sbjct: 387 AVPLSPSKALRYATIKHRFADTILKAQNKAVLDNGDKADPMKMRQVKERLERRQQEEKAR 446
Query: 478 IEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGC 537
IEAQI+AAEAA+R + E E+K+QRE+EREAAR+ LQKME+T IE NL+ILKELEML GC
Sbjct: 447 IEAQIRAAEAATRRREETEMKRQREREREAARIELQKMEKTTGIEQNLDILKELEMLCGC 506
Query: 538 CLSPHLLNGSEAQKRAFKE--AHFKNPLERIGLFMKSDYLVEDEDEEILNLDGDGEEGEI 595
+S + GS + E A +PLER+GLF+K D +ED DEE LD DGEEGEI
Sbjct: 507 SISLNYHFGSGRMEVVKGEIGACIGSPLERLGLFIKDD--IEDVDEEF--LDEDGEEGEI 562
Query: 596 F 596
Sbjct: 563 L 563
>gi|224116480|ref|XP_002317311.1| global transcription factor group [Populus trichocarpa]
gi|222860376|gb|EEE97923.1| global transcription factor group [Populus trichocarpa]
Length = 567
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 340/601 (56%), Positives = 410/601 (68%), Gaps = 40/601 (6%)
Query: 1 MIATEAVITKKKLKIKFGSQRIEAVPGSQPCEYGQQQSHVENWRHSSSVAESNQLMMSKP 60
MIA +V+ KK L IK SQRIE +PG + + S SV+ S
Sbjct: 1 MIAAGSVVMKK-LTIKIASQRIEVIPGKK----------LLAAERSCSVSVSE------- 42
Query: 61 YRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM 120
+ G + SE K++SS+ KR ++IE + KR KMDR VT QCS +LKSLM+
Sbjct: 43 ---NPGSQTSKSEIVKQKSSVSGSRKRGPPKMIECKQQKRLKMDRAVTQQCSALLKSLMV 99
Query: 121 HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
HPAGWVFN+PVDPV L+IPDYFSIIS PMDLGTVK++L +N Y+ EF D+RLTFSNA
Sbjct: 100 HPAGWVFNKPVDPVALNIPDYFSIISIPMDLGTVKSKLGKNCYASIKEFADDIRLTFSNA 159
Query: 181 MLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVNDTRQNCP 240
MLYNPP NNVHKMA+ELN +F+ WK+LE+KW+ E PK G GKI+SG+ ++ D+R NCP
Sbjct: 160 MLYNPPTNNVHKMAEELNGIFETSWKALEDKWNHEGPKFGSGKIISGQTTQIIDSRPNCP 219
Query: 241 KTPPLHSTLSSKKSKMSEEKAARSSYCARA-VEVERAKPAQNLSSKLVIKNLHKGTNDGG 299
+TPPLHS KKSK SEEKA + V + S ++ GT+ GG
Sbjct: 220 RTPPLHSNALPKKSKPSEEKAKPTKPAGVCKSHVPSSYKGVKWQSSVI------GTDGGG 273
Query: 300 RLACNIVNAKPPLSPVACKSCGKCGSATCGCNLPSDSTHASSDITSERSLGGD-RACSTD 358
R AC N KP L PVA +C CGS TC C L SDS H +SDI+SERS G D RACSTD
Sbjct: 274 RHACVSKNVKPLLIPVA-SNCSSCGSNTCQCRLQSDSNHTNSDISSERSSGRDQRACSTD 332
Query: 359 ASKPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLD 418
SKP+ KS QMSKSDPDSDGAVSALDD N+CPSSQLT PA D+AS E+W++ L D
Sbjct: 333 TSKPE---KSMPVPQMSKSDPDSDGAVSALDDENICPSSQLTTPAADAASGEDWSS-LFD 388
Query: 419 VQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARI 478
V +SP KALR A +K RFADTILKAQ + L GDKADP+K++QEKERLE+RQREEK+ I
Sbjct: 389 VPLSPTKALRYATIKHRFADTILKAQNKAPLHDGDKADPMKMRQEKERLERRQREEKSWI 448
Query: 479 EAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCC 538
EAQI+AAEAASR + E+ELK QRE+EREAAR+ALQKME+TVEIE NL+I +ELE L GC
Sbjct: 449 EAQIRAAEAASRRREEMELKMQREREREAARIALQKMEKTVEIEQNLDIQRELERLCGCS 508
Query: 539 LSPHLLNGS---EAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDEEILNLDGDGEEGEI 595
+S GS E K+ A +PLER+GLFMK D +EDED LDGDGEEGEI
Sbjct: 509 ISFDFRFGSGKMEVVKKGEIGACIGSPLERLGLFMKDD--IEDEDGGEF-LDGDGEEGEI 565
Query: 596 F 596
Sbjct: 566 L 566
>gi|359483574|ref|XP_002269681.2| PREDICTED: transcription factor GTE9-like [Vitis vinifera]
Length = 588
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 317/649 (48%), Positives = 403/649 (62%), Gaps = 115/649 (17%)
Query: 1 MIATEAVITKKKLKIKFGSQRIEAVPGSQPCEYGQQQSHVENWRHSSSVAESNQLMMSKP 60
M A ++ +KLKIKF ++++EA P + CE+G S + H +
Sbjct: 1 MDAIGKILPNRKLKIKFAAKKVEAEPVTLSCEFGNDISLTDESVHGTK------------ 48
Query: 61 YRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM 120
KR + + PK KR KMDR T QC+ ILK LM
Sbjct: 49 -------------------------KRGTPGITDVPKAKRQKMDRSTTLQCTSILKKLMT 83
Query: 121 HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
HPAGWVFN+PVDPV L+IPDYFSIISKPMDLGT+K++L++N+Y ++EF ADVRLTF+NA
Sbjct: 84 HPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNMYLATEEFAADVRLTFANA 143
Query: 181 MLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSG-KMMEVNDTRQNC 239
MLYNPP NNVH+MA++LN+LF+ +WK+++ WS E K GKILSG + +N +RQ C
Sbjct: 144 MLYNPPSNNVHQMAKKLNDLFNTRWKTVDTNWS-ESSKVDPGKILSGGRGKTINSSRQKC 202
Query: 240 PKTPPLHS------------------------------------------TLSSKKSKMS 257
TP LH+ T+ K
Sbjct: 203 STTPSLHANSMSFEDKQKLRKELMEVSRGKMPPYLGGFLRRHGMTCQNIETMEVNIDKFD 262
Query: 258 EE------KAARSSYCARAVEVERAKPAQNLSSKLVIKNLHKGTNDGGRLACNIVNAKPP 311
EE + + S AR +VE K A+N +K K+L KGT+ AC N K P
Sbjct: 263 EETLLELRRVMKISCDARTEKVECTKTAENCRTKSSGKDLDKGTDRNNAHACGSGNTKLP 322
Query: 312 LSPVACKSCGKCGSATCGCNLPSDSTH-ASSDITSERSLGGD-RACSTDASKPDCQVKST 369
LS L +DS + +SSD+++ERS D RACS+DAS+P+CQVK+T
Sbjct: 323 LS------------------LQNDSNNGSSSDLSTERSFVKDYRACSSDASEPNCQVKNT 364
Query: 370 STSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRA 429
S++SKSDPDSDGAVSA+DD N+C SS P T +A E W TP+ DVQ+SPKKALRA
Sbjct: 365 -ISRISKSDPDSDGAVSAVDDENICTSSHPMTPTTAAAPGEGWITPIFDVQLSPKKALRA 423
Query: 430 AMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAAS 489
AMLKSRFADTILKAQQ+TLLDHG+KAD VK+QQ+KERLE++Q EEK R+EAQ++AAEAAS
Sbjct: 424 AMLKSRFADTILKAQQKTLLDHGNKADRVKMQQKKERLEKKQLEEKGRLEAQVRAAEAAS 483
Query: 490 RMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCCLSPHLL--NGS 547
RMKAE E K QREKEREAARVALQKM RTVE E+N++I+KELE LSGC L+ S
Sbjct: 484 RMKAETESKLQREKEREAARVALQKMARTVEFENNVQIVKELEKLSGCVLTYQYYRQRDS 543
Query: 548 EAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDEEILNLDGDGEEGEIF 596
+ Q RAF +F NPLER+GL++K D+ V DEDE+I+ L+ DGEEGEI
Sbjct: 544 KVQLRAF---NFGNPLERLGLYIKDDFFV-DEDEKII-LNEDGEEGEIL 587
>gi|147826573|emb|CAN72911.1| hypothetical protein VITISV_007433 [Vitis vinifera]
Length = 588
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 317/649 (48%), Positives = 402/649 (61%), Gaps = 115/649 (17%)
Query: 1 MIATEAVITKKKLKIKFGSQRIEAVPGSQPCEYGQQQSHVENWRHSSSVAESNQLMMSKP 60
M A ++ +KLKIKF ++++EA P + CE+G S + H +
Sbjct: 1 MDAIGKILPNRKLKIKFAAKKVEAEPVTLSCEFGNDISLTDESVHGTK------------ 48
Query: 61 YRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM 120
KR + + PK KR KMDR T QC+ ILK LM
Sbjct: 49 -------------------------KRGXPGITDVPKAKRQKMDRSTTLQCTSILKXLMT 83
Query: 121 HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
HPAGWVFN+PVDPV L+IPDYFSIISKPMDLGT+K++L++N Y ++EF ADVRLTF+NA
Sbjct: 84 HPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNXYLATEEFAADVRLTFANA 143
Query: 181 MLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSG-KMMEVNDTRQNC 239
MLYNPP NNVH+MA++LN+LF+ +WK+++ WS E K GKILSG + +N +RQ C
Sbjct: 144 MLYNPPSNNVHQMAKKLNDLFNTRWKTVDTNWS-ESSKVDPGKILSGGRGKTINSSRQKC 202
Query: 240 PKTPPLHS------------------------------------------TLSSKKSKMS 257
TP LH+ T+ K
Sbjct: 203 STTPSLHANSMSFEDKQKLRKELMEVSRGKMPPYLGGFLRRHGMTCQNIETMEVNIDKFD 262
Query: 258 EE------KAARSSYCARAVEVERAKPAQNLSSKLVIKNLHKGTNDGGRLACNIVNAKPP 311
EE + + S AR +VE K A+N +K K+L KGT+ AC N K P
Sbjct: 263 EETLLELRRVMKISCDARTEKVECTKTAENCRTKSSGKDLDKGTDRNNAHACGSGNTKLP 322
Query: 312 LSPVACKSCGKCGSATCGCNLPSDSTH-ASSDITSERSLGGD-RACSTDASKPDCQVKST 369
LS L +DS + +SSD+++ERS D RACS+DAS+P+CQVK+T
Sbjct: 323 LS------------------LQNDSNNGSSSDLSTERSFVKDYRACSSDASEPNCQVKNT 364
Query: 370 STSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRA 429
S++SKSDPDSDGAVSA+DD N+C SS P T +A E W TP+ DVQ+SPKKALRA
Sbjct: 365 -ISRISKSDPDSDGAVSAVDDENICTSSHPMTPTTAAAPGEGWITPIFDVQLSPKKALRA 423
Query: 430 AMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAAS 489
AMLKSRFADTILKAQQ+TLLDHG+KAD VK+QQ+KERLE++Q EEK R+EAQ++AAEAAS
Sbjct: 424 AMLKSRFADTILKAQQKTLLDHGNKADRVKMQQKKERLEKKQLEEKGRLEAQVRAAEAAS 483
Query: 490 RMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCCLSPHLL--NGS 547
RMKAE E K QREKEREAARVALQKM RTVE E+N++I+KELE LSGC L+ S
Sbjct: 484 RMKAETESKLQREKEREAARVALQKMARTVEFENNVQIVKELEKLSGCVLTYQYYRQRDS 543
Query: 548 EAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDEEILNLDGDGEEGEIF 596
+ Q RAF +F NPLER+GL++K D+ V DEDE+I+ L+ DGEEGEI
Sbjct: 544 KVQLRAF---NFGNPLERLGLYIKDDFFV-DEDEKII-LNEDGEEGEIL 587
>gi|297740594|emb|CBI30776.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 301/564 (53%), Positives = 376/564 (66%), Gaps = 78/564 (13%)
Query: 86 KRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSII 145
KR + + PK KR KMDR T QC+ ILK LM HPAGWVFN+PVDPV L+IPDYFSII
Sbjct: 34 KRGTPGITDVPKAKRQKMDRSTTLQCTSILKKLMTHPAGWVFNQPVDPVALNIPDYFSII 93
Query: 146 SKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
SKPMDLGT+K++L++N+Y ++EF ADVRLTF+NAMLYNPP NNVH+MA++LN+LF+ +W
Sbjct: 94 SKPMDLGTIKSKLEKNMYLATEEFAADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRW 153
Query: 206 KSLEEKWSSEVPKAGLGKILSG-KMMEVNDTRQNCPKTPPLHS----------------- 247
K+++ WS E K GKILSG + +N +RQ C TP LH+
Sbjct: 154 KTVDTNWS-ESSKVDPGKILSGGRGKTINSSRQKCSTTPSLHANSMSFEDKQKLRKELME 212
Query: 248 -------------------------TLSSKKSKMSEE------KAARSSYCARAVEVERA 276
T+ K EE + + S AR +VE
Sbjct: 213 VSRGKMPPYLGGFLRRHGMTCQNIETMEVNIDKFDEETLLELRRVMKISCDARTEKVECT 272
Query: 277 KPAQNLSSKLVIKNLHKGTNDGGRLACNIVNAKPPLSPVACKSCGKCGSATCGCNLPSDS 336
K A+N +K K+L KGT+ AC N K PLS L +DS
Sbjct: 273 KTAENCRTKSSGKDLDKGTDRNNAHACGSGNTKLPLS------------------LQNDS 314
Query: 337 TH-ASSDITSERSLGGD-RACSTDASKPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLC 394
+ +SSD+++ERS D RACS+DAS+P+CQVK+T S++SKSDPDSDGAVSA+DD N+C
Sbjct: 315 NNGSSSDLSTERSFVKDYRACSSDASEPNCQVKNT-ISRISKSDPDSDGAVSAVDDENIC 373
Query: 395 PSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDK 454
SS P T +A E W TP+ DVQ+SPKKALRAAMLKSRFADTILKAQQ+TLLDHG+K
Sbjct: 374 TSSHPMTPTTAAAPGEGWITPIFDVQLSPKKALRAAMLKSRFADTILKAQQKTLLDHGNK 433
Query: 455 ADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREKEREAARVALQK 514
AD VK+QQ+KERLE++Q EEK R+EAQ++AAEAASRMKAE E K QREKEREAARVALQK
Sbjct: 434 ADRVKMQQKKERLEKKQLEEKGRLEAQVRAAEAASRMKAETESKLQREKEREAARVALQK 493
Query: 515 MERTVEIEHNLEILKELEMLSGCCLSPHLL--NGSEAQKRAFKEAHFKNPLERIGLFMKS 572
M RTVE E+N++I+KELE LSGC L+ S+ Q RAF +F NPLER+GL++K
Sbjct: 494 MARTVEFENNVQIVKELEKLSGCVLTYQYYRQRDSKVQLRAF---NFGNPLERLGLYIKD 550
Query: 573 DYLVEDEDEEILNLDGDGEEGEIF 596
D+ V DEDE+I+ L+ DGEEGEI
Sbjct: 551 DFFV-DEDEKII-LNEDGEEGEIL 572
>gi|255580043|ref|XP_002530855.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223529579|gb|EEF31529.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 536
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 307/590 (52%), Positives = 377/590 (63%), Gaps = 62/590 (10%)
Query: 8 ITKKKLKIKFGSQRIEAVPGSQPCEYGQQQSHVENWRHSSSVAESNQLMMSKPYRSSGGK 67
+ +KLKIKF S++I+ V G + C + + K YRS
Sbjct: 7 VVAEKLKIKFSSRKIDGVSGRKACGFAHN--------------------VEKNYRSRACD 46
Query: 68 KMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVF 127
++ +ERS+I KR+ E++EG K+ KMDR V HQC+ ++KSLM HP GWVF
Sbjct: 47 TENMKQNPRERSAI----KRRPTEMVEGQSKKKRKMDRSVIHQCASLVKSLMDHPCGWVF 102
Query: 128 NRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPE 187
PVDP KL IPDYFSII+ PMDLGTVK++L+ N Y S+EF ADVRLTFSNA+LYN P
Sbjct: 103 KEPVDPDKLHIPDYFSIITNPMDLGTVKSKLENNQYFESEEFAADVRLTFSNALLYNTPP 162
Query: 188 NNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVNDTRQNCPKTPPLHS 247
N VH MA++L +F+ +WK+LEEKW+ ++PK G GK + EV DTRQN P+T PL +
Sbjct: 163 NYVHNMAEKLKKIFETRWKALEEKWNYQIPKGGDGKPFHARPKEVGDTRQNYPETHPLRN 222
Query: 248 TLSSKKSKMSEEKAARSSYCARAVEVERAKPAQNLSSKLVIKNLHKGTNDGGRLACNIVN 307
+ +K+SK SE K R S RA +V+ + +SK + +N +KGT++GG+ AC VN
Sbjct: 223 AVLTKRSKPSEVKLLRCSSDVRAAKVKLS------NSKELRQNSYKGTDNGGKNACGYVN 276
Query: 308 AKPPLSPVACKSCGKCGSATCGCNLPSDSTHASSDITSERSLGGD-RACSTDASKPDCQV 366
KP V K CG CG C C LPSDS ASS I+SERS G D A ST SK D Q
Sbjct: 277 VKPSSFSVVSK-CGTCGRKACQCILPSDSAQASSGISSERSSGRDHHAYSTGTSKMDVQG 335
Query: 367 KSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKA 426
K S QMSKSDPDSDG +SALD+ N+C +SQL PA + DVQ+SP KA
Sbjct: 336 KCMSMPQMSKSDPDSDGDISALDEENICRNSQLMTPAK--------YISIFDVQLSPTKA 387
Query: 427 LRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAE 486
LRAAM+K RFADTI KAQ + LL HGDKADPVKLQQEKER E RQ EEKARIEAQI+AAE
Sbjct: 388 LRAAMIKRRFADTIFKAQLKKLLPHGDKADPVKLQQEKERFEMRQLEEKARIEAQIRAAE 447
Query: 487 AASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCCLSPHLLNG 546
QREKEREAAR+ALQKME T EIE N+EI+KELE LSGC LS G
Sbjct: 448 -------------QREKEREAARIALQKMENTAEIEQNIEIIKELEKLSGCSLSYSYSFG 494
Query: 547 SEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDEEILNLDGDGEEGEIF 596
+R + AH + LER+GL MK D + +D+EILN GD EEGEI
Sbjct: 495 ----RRGPEGAHSCSLLERLGLIMKDDIV---DDDEILN--GDVEEGEIL 535
>gi|356557783|ref|XP_003547190.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 565
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 304/610 (49%), Positives = 392/610 (64%), Gaps = 58/610 (9%)
Query: 1 MIATEAVITKKKLKIKFGSQRIEAVPGSQPCEYGQQQSHVENWRHSSSVAESNQLMMSKP 60
MIATE ++ KLKIKF ++R+E G + E+GQ+ SH + R
Sbjct: 1 MIATETIVPSTKLKIKFSTKRMEVESGPK-YEFGQKVSHTDENRS--------------- 44
Query: 61 YRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM 120
+ +G +SS L NKR IEG K+KR ++DR + QC+ ILKSLM
Sbjct: 45 FNLNG------------KSSALNSNKRGPPTSIEGQKEKRQRIDRKGSMQCATILKSLMS 92
Query: 121 HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
H WVF++PVDP+ L IPDYF+IIS PMDLGT+K++L++N+YS ++EF ADVRLTFSNA
Sbjct: 93 HTYSWVFSKPVDPIALSIPDYFTIISHPMDLGTIKSKLEKNIYSGTEEFAADVRLTFSNA 152
Query: 181 MLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVNDTRQNCP 240
M YNPP N+VH MA+EL+ +FD KWK L KW E + + +T +
Sbjct: 153 MKYNPPSNDVHLMAKELSKIFDRKWKDLGRKWKCEDEHD------KSESETIKETGRKSL 206
Query: 241 KTPPLHSTLSSKKSKMSEEKAARS--SYCARAVEVERAKPAQNLSSKLVIKNLHKGTNDG 298
H KK+++SE K S + VE +K +Q + KL+ K++HKG N G
Sbjct: 207 DMLSRHRDSLPKKTQVSEHKGMPKIRSLATKDARVEPSKLSQ-IPCKLIEKDMHKG-NKG 264
Query: 299 GRLACNIVNAKPPLSPVACKS-------CGKCGSATCGCNLPSDSTHASSDITSERSLGG 351
N +P S AC S C CG TC C +PS+S SSDI+SE S GG
Sbjct: 265 -----NHDVEQPAGSLKACSSVCFVTSKCRICGDTTCHCVIPSNSIQVSSDISSEGSEGG 319
Query: 352 DRAC-STDASKPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAE 410
D D+ + +C K TS + KSDPDSDGAVS+LD ++CPSSQ P TD++S E
Sbjct: 320 DVITRGADSLRQNCPTKCTSPIE-KKSDPDSDGAVSSLDSEHVCPSSQHVTPTTDASSGE 378
Query: 411 EWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQR 470
W+TP+L VQ+SPKKALRAAMLKSRFADTILKAQQ+TLLDHGDK +P K+QQEKERLE+
Sbjct: 379 VWSTPVLPVQLSPKKALRAAMLKSRFADTILKAQQKTLLDHGDKGNPQKMQQEKERLERI 438
Query: 471 QREEKARIEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKE 530
QREE+ARIEAQIK AEAA+RM+AE E +++REKEREAAR A++KM+RTV+IEHN+EI+KE
Sbjct: 439 QREERARIEAQIKIAEAAARMRAEEESRQRREKEREAARAAIEKMKRTVDIEHNVEIIKE 498
Query: 531 LEMLSGCCLSPHLL---NGSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDEEILNLD 587
LE LSGC LS + NG + + F+NPLER+GLF+K D+ DEDEE+LN
Sbjct: 499 LESLSGCTLSYKAVGCRNGYKVALETLDKPQFENPLERLGLFIKEDFTA-DEDEEVLN-- 555
Query: 588 GDGEEGEIFS 597
G EEGEIF+
Sbjct: 556 GGFEEGEIFN 565
>gi|356549150|ref|XP_003542960.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 566
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 300/605 (49%), Positives = 385/605 (63%), Gaps = 47/605 (7%)
Query: 1 MIATEAVITKKKLKIKFGSQRIEAVPGSQPCEYGQQQSHVENWRHSSSVAESNQLMMSKP 60
MIATE ++ KLKIKF ++RIE G + CE+GQ+ H + R
Sbjct: 1 MIATETIVPSTKLKIKFSTKRIEIDSGPK-CEFGQKVYHNDKNRRC-------------- 45
Query: 61 YRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM 120
+S E SS L NKR +EG K+KR K+DR + QC+ ILKSLM
Sbjct: 46 -------------NSNENSSALNSNKRGPPVSVEGQKEKRQKIDRKGSMQCATILKSLMS 92
Query: 121 HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
H WVF +PVDPV L IPDYF+IIS PMDLGT+K++L+RN+YS ++EF DVRLTFSNA
Sbjct: 93 HSYSWVFLKPVDPVALSIPDYFTIISHPMDLGTIKSKLERNIYSGTEEFADDVRLTFSNA 152
Query: 181 MLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVNDT-RQNC 239
M YNPP N+VH MA+EL+ +FD KWK KW E + + +T R++
Sbjct: 153 MKYNPPGNDVHMMAKELSKIFDRKWKDFGRKWKFEDEHD------KSETETIKETGRKSL 206
Query: 240 PKTPPLHSTLSSKKSKMSEEKAARS--SYCARAVEVERAKPAQNLSSKLVIKNLHKGTND 297
P H KK+++ E K S + VE K +Q + KL+ K+LHKG+
Sbjct: 207 DAMLPRHKDSLPKKTQLFEHKGMHKIRSLATKDARVETPKLSQ-IPCKLIEKDLHKGSKG 265
Query: 298 GGRLACNIVNAKPPLSPVACKS-CGKCGSATCGCNLPSDSTHASSDITSERSLGGDR-AC 355
+ + K S S C CG+ C C PS+ST SSDI+SE S G D A
Sbjct: 266 NHDVEQPAGSLKSYFSVRFVTSKCRICGNIICHCENPSNSTQVSSDISSEGSEGRDLIAR 325
Query: 356 STDASKPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTP 415
D+ + DC+ K TS + KSD DSDGAVS+LD ++CPSSQ P TD++S E W+ P
Sbjct: 326 GADSLRQDCRTKCTSPME-KKSDLDSDGAVSSLDSEHVCPSSQHVTPTTDASSGEVWSMP 384
Query: 416 LLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEK 475
+L VQ+SPKKALRAA+LKSRFADTILKAQQ+TLLDHGDK +P K+QQEKERLE+ QREE+
Sbjct: 385 VLPVQLSPKKALRAAILKSRFADTILKAQQKTLLDHGDKGNPQKMQQEKERLERIQREER 444
Query: 476 ARIEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLS 535
ARIEAQIK AEAA+RM+AE E +++REKEREA+R A++KM+RTV+IEHN+EI+KELE LS
Sbjct: 445 ARIEAQIKTAEAAARMRAEEESRQRREKEREASRAAIEKMKRTVDIEHNMEIIKELESLS 504
Query: 536 GCCLSPHLLNGSEAQKRAFK---EAHFKNPLERIGLFMKSDYLVEDEDEEILNLDGDGEE 592
GC LS + G K A + + F+NPLER+GLF+K D+ D DEE+LN G EE
Sbjct: 505 GCTLSYKAVGGRNGYKVALETLDKHQFENPLERLGLFIKEDFTT-DLDEEVLN--GGFEE 561
Query: 593 GEIFS 597
GEIF+
Sbjct: 562 GEIFN 566
>gi|255565481|ref|XP_002523731.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223537035|gb|EEF38671.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 532
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 298/579 (51%), Positives = 372/579 (64%), Gaps = 55/579 (9%)
Query: 8 ITKKKLKIKFGSQRIEAVPGSQPCEYGQQQSHVENWRHSSSVAESNQLMMSKPYRSSGGK 67
+ +KLKIKF S++I+ V G + C++ +VE HS + N M P
Sbjct: 6 VVAEKLKIKFSSRKIDTVSGRKACDFAH---NVEKNYHSRACDREN--MKQNP------- 53
Query: 68 KMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVF 127
+ERS+I KR E++EG ++K+ KMDR V HQC+ ++KSLM HP GWVF
Sbjct: 54 --------RERSAI----KRGPSEMVEGQQNKKRKMDRSVIHQCASLVKSLMDHPCGWVF 101
Query: 128 NRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPE 187
PV+P KL I II+ PMDLGTVK++L+ + Y +EF ADVRLTFSNA+L NPP
Sbjct: 102 KEPVNPDKLKI-----IITNPMDLGTVKSKLENDRYFRIEEFAADVRLTFSNALLCNPPP 156
Query: 188 NNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVNDTRQNCPKTPPLHS 247
N VHKMA++L +F+ +W +LEEKW++ K G GK + + EV DT Q CP+T P +
Sbjct: 157 NCVHKMAEKLKRIFETRWNALEEKWNA---KDGNGKPFNARAKEVGDTGQICPETHPSRN 213
Query: 248 TLSSKKSKMSEEKAARSSYCARAVEVERAKPAQNLSSKLVIKNLHKGTNDGGRLACNIVN 307
+ K+SK SE K R S RA +V+ + +SK + +N ++ T+DGGR AC VN
Sbjct: 214 AVLLKRSKPSEVKLLRCSSDVRAAKVKLS------NSKELRQNSYERTDDGGRNACGSVN 267
Query: 308 AKPPLSPVACKSCGKCGSATCGCNLPSDSTHASSDITSERSLGGDR-ACSTDASKPDCQV 366
KP V K CG G C C LP DS ASS I+SERS G D ACST SK D Q
Sbjct: 268 VKPSSVSVVSK-CGTFGRNACQCILPGDSAQASSGISSERSSGRDHHACSTGTSKMDVQG 326
Query: 367 KSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKA 426
K S QMSKSD DSDGAVSAL + N+CP+SQL PA + DVQ+SP K
Sbjct: 327 KCMSMPQMSKSDRDSDGAVSALAEENICPNSQLMTPAK--------YISIFDVQLSPTKT 378
Query: 427 LRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAE 486
LRAA++K RFADTI KAQ + LL HGDKADPVKLQQEKERLE+RQ EEKARIEAQI+AAE
Sbjct: 379 LRAAVIKRRFADTIFKAQLKKLLHHGDKADPVKLQQEKERLEKRQLEEKARIEAQIRAAE 438
Query: 487 AASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCCLSPHLLNG 546
AASR + IELK+QREKEREAARVALQKME T EIE N EI+KELE LSGC L + G
Sbjct: 439 AASRKREGIELKRQREKEREAARVALQKMEETAEIEQNTEIIKELEKLSGCSLPYNYSFG 498
Query: 547 SEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDEEILN 585
+R + AH + LER+GL +K D + +D+EILN
Sbjct: 499 ----RRGPEGAHSCSLLERLGLILKDDIV---DDDEILN 530
>gi|449433591|ref|XP_004134581.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
gi|449523269|ref|XP_004168646.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
Length = 569
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 290/605 (47%), Positives = 378/605 (62%), Gaps = 46/605 (7%)
Query: 1 MIATEAVITKKKLKIKFGSQRIEAVPGSQPCEYGQQQSHVENW--RHSSSVAESNQLMMS 58
MIATE ++ KKLKIKFG +R+E PG Q CE+G+ ++ R+ V S + S
Sbjct: 1 MIATETIVPSKKLKIKFGGKRVEDHPGPQSCEFGKLVGQKLSFMGRNGLKVDGSGRFKYS 60
Query: 59 KPYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSL 118
S+G K +A+ K +SSI +KR+A E IE P++K+ K+DRG T QCS ILK+L
Sbjct: 61 LNTFSNG--KTLAAACCKSKSSITIADKRRATEDIESPREKKQKLDRGTTQQCSSILKTL 118
Query: 119 MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFS 178
M H GWVFN+PVDPV L IPDYFSII+ PMDLGTVK++L+RNLY S+EF AD+RLTFS
Sbjct: 119 MTHRFGWVFNQPVDPVALKIPDYFSIITDPMDLGTVKSKLERNLYQASEEFAADIRLTFS 178
Query: 179 NAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVNDTRQN 238
NAMLYNP N+VHKMA+EL F+ KW +EKW +SG+ + N
Sbjct: 179 NAMLYNPSGNHVHKMAKELLENFEKKWILPKEKW------------VSGRSNFQREKPSN 226
Query: 239 CP------KTPPLHSTLSSKKSKMSEEKAARSSYCARAVEVERAKPAQNLSSKLVIKNLH 292
P +TP HS+L +KKS SEE ++ EV+R+ P + K KN H
Sbjct: 227 GPPGEKISRTPSSHSSLLNKKSTGSEENVSKLFSNVNGAEVDRSSPT--CAPKPPRKNFH 284
Query: 293 KGTNDGGRLACNIVNAKPPLSPVACKSCGKCGSATCGCNLPSDSTHASSDITSERSLGGD 352
GT G A + + + P KC + CG +P H S + + GD
Sbjct: 285 TGTETGSNDASSSFDKQTPRH--------KC--SGCGTIMP---CHCVSSSSLDHVSSGD 331
Query: 353 RACSTDASKPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEW 412
D+ + D Q S S SKSD DSDG S L+D P Q +S S E
Sbjct: 332 ---VNDSCRRDSQTSGLSASHKSKSDTDSDGIRSVLEDEGKPPYDQSLARGANSTS-EVC 387
Query: 413 TTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQR 472
+TP+ DVQ+SPKKALRAAMLKSRFA+TILKAQQ+TLLD GDK D +K+QQEKERLE++QR
Sbjct: 388 STPVFDVQLSPKKALRAAMLKSRFAETILKAQQKTLLDLGDKVDQLKIQQEKERLERKQR 447
Query: 473 EEKARIEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELE 532
EE+ RIEAQIKAA+ A R+KAE E K+QRE++REAAR+ALQK+ERTV+++ NLEILKELE
Sbjct: 448 EERERIEAQIKAADMALRLKAEAEKKQQRERDREAARIALQKIERTVDLDQNLEILKELE 507
Query: 533 MLSGCCLSPHLLNGSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDEEILNLDGDGEE 592
L G L + + KR+ + +NPLER+GLF+K ++L D+DEE + +G+E
Sbjct: 508 KLCGGFL--FIQHHRAMVKRSLDDCQLENPLERLGLFIKDEFL--DDDEETI-YSVNGKE 562
Query: 593 GEIFS 597
E+FS
Sbjct: 563 REVFS 567
>gi|357447117|ref|XP_003593834.1| Bromodomain-containing factor [Medicago truncatula]
gi|355482882|gb|AES64085.1| Bromodomain-containing factor [Medicago truncatula]
Length = 520
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 290/614 (47%), Positives = 367/614 (59%), Gaps = 112/614 (18%)
Query: 1 MIATEAVITKKKLKIKFGSQRIEAVPGSQPCEYGQQQSHV-ENWRHSSSVAESNQLMMSK 59
MIATE + KLKIKF ++RIE V G + C++G++ S + EN R
Sbjct: 1 MIATEIIAPATKLKIKFSTKRIEVVSGPK-CQFGEKVSQLDENGR-------------CN 46
Query: 60 PYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM 119
P + +SS+L NKR+ IEGPK+KR K+DR +H+C+ ILK L+
Sbjct: 47 PIK---------------KSSLLGSNKREPSGNIEGPKNKRQKLDRKGSHKCATILKCLI 91
Query: 120 MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSN 179
HP WVF PVDPV L+IPDYF++IS PMDLGT+K +LD+N+Y +EF ADVRLTFSN
Sbjct: 92 SHPYSWVFKTPVDPVALNIPDYFTVISHPMDLGTIKFKLDKNIYYSKEEFAADVRLTFSN 151
Query: 180 AMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS----SEVPKAGLGKILSGKMMEVNDT 235
AM YNPP N+VH MA+ELN LF+ KWK +++KW+ E + G+ K K +V +
Sbjct: 152 AMTYNPPSNDVHLMAKELNKLFERKWKDMDKKWNFEDEHEKSETGMIKETVRKSYDVTQS 211
Query: 236 RQNCPKTPPLHSTLSSKKSKMSEEKAAR--SSYCARAVEVERAKPAQNLSSKLVIKNLHK 293
R H +K S+ SE K SS R +VE K +Q + K + K+L K
Sbjct: 212 R---------HKDSFTKSSRASEHKGIPKISSLATRDAKVEVPKLSQ-IPCKPLEKDLIK 261
Query: 294 GTNDGGRLACNIVNAKPPLSPVACKSCGKCGSATCGCNLPSDSTHASSDITSERSLGGDR 353
G+ D + TCG +
Sbjct: 262 GSEDRE-------------------------TTTCGAS---------------------- 274
Query: 354 ACSTDASKPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWT 413
A K DCQ K TS Q KSDP SDGAVS+LD + CPSS ATD++S E W
Sbjct: 275 -----ALKQDCQAKCTSPLQ-RKSDPGSDGAVSSLDSEHACPSSPHATLATDASSVEVWN 328
Query: 414 TPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQRE 473
TP+L VQ+SPK+ALR AML+SRFA TILKAQQ TLL HGDK DP+K+Q EKERLE+ QRE
Sbjct: 329 TPVLPVQLSPKRALRYAMLRSRFAGTILKAQQNTLLKHGDKGDPMKMQLEKERLERIQRE 388
Query: 474 EKARIEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEM 533
E+ARIEAQIKAAEAA R +AE EL++Q EKEREAAR A+++M+R+V+IEHNLE++KELE
Sbjct: 389 EQARIEAQIKAAEAAERTRAEEELRQQIEKEREAARAAIEQMKRSVDIEHNLEVVKELES 448
Query: 534 LSGCCLSPHLLNGSEAQKRAFKE----AHFKNPLERIGLFMKSDYLVEDEDEEILN---- 585
LSGC LS + GS RA E F+NPLER+GLF+K DY+ DEDEEILN
Sbjct: 449 LSGCRLSYKAM-GSRNDNRAAMERLDKLQFENPLERLGLFIKDDYIA-DEDEEILNEVGG 506
Query: 586 ---LDGDGEEGEIF 596
+ G EEGEIF
Sbjct: 507 GGVVGGSWEEGEIF 520
>gi|255567701|ref|XP_002524829.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223535889|gb|EEF37549.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 515
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 279/606 (46%), Positives = 349/606 (57%), Gaps = 102/606 (16%)
Query: 1 MIATEAVITKKKLKIKFGSQRIEAVPGSQPCEYGQQQSHVENWRHSSSVAESNQLMMSKP 60
MI T V+++K L+IKF S++I+ V G + C + +VE HS + N M P
Sbjct: 1 MIVTVPVVSEK-LRIKFSSRKIDGVSGRKACGFAH---NVEKNYHSRACDTEN--MKQNP 54
Query: 61 YRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM 120
+E S+I KR+ E++EG K+ KM+R V HQC+ +
Sbjct: 55 ---------------REHSAI----KRRPSEMVEGQSKKKRKMERSVIHQCASL------ 89
Query: 121 HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
PVDP KL IPDYFSII+ PMDLGTVK++L+ N Y S+EF ADVRLTFSNA
Sbjct: 90 --------EPVDPDKLQIPDYFSIITNPMDLGTVKSKLENNQYFESEEFAADVRLTFSNA 141
Query: 181 MLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVNDTRQNCP 240
L NPP N VH M ++L +F+ +WK+LEEKW+ +VPK G GK + + EV DTRQ P
Sbjct: 142 SLCNPPPNYVHNMVEKLKKIFETRWKALEEKWNYQVPKGGDGKPFNARPKEVGDTRQKYP 201
Query: 241 KTPPLHSTLSSKKS-KMSEEKAARSSYCARAVEVERAKPAQNLSSKLVIKNLHKGTNDGG 299
+T PL + + +K+S K SE K R S RA + A+ +SK + +N +KGT++GG
Sbjct: 202 ETHPLRNAVLTKRSTKPSEVKLLRCSSHVRAAK------AKLSNSKELRQNSYKGTDNGG 255
Query: 300 RLACNIVNAKPPLSPVACKSCGKCGSATCGCNLP---------SDSTHASSDITSERSLG 350
R AC VN KP V CG CG P S +I +LG
Sbjct: 256 RNACGYVNVKPSSVSVV-SKCGTCGRKPVSAYFPAIQPKLLQVSLRRGHRVEIIMHTALG 314
Query: 351 GDRACSTDASKPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAE 410
K S QMSKSDPD DGA+SA D+ N+C +SQL PA
Sbjct: 315 ----------------KCMSMPQMSKSDPDFDGAISAPDEENICRNSQLMTPAK------ 352
Query: 411 EWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQR 470
+ DVQ+SP KALRAAM+K RFADTI KAQ + L HGDKADPVKLQQEKERLE R
Sbjct: 353 --YMSIFDVQLSPTKALRAAMIKRRFADTIFKAQLKKRLPHGDKADPVKLQQEKERLEMR 410
Query: 471 QREEKARIEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKE 530
Q EEKARIEAQI+AAE REKEREAAR+ALQKME+T EIE N+EI+KE
Sbjct: 411 QLEEKARIEAQIRAAE-------------HREKEREAARIALQKMEKTAEIEQNIEIIKE 457
Query: 531 LEMLSGCCLSPHLLNGSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDEEILNLDGDG 590
LE LSGC LS G +R + AH + LER+GL MK D + +D+EILN GD
Sbjct: 458 LEKLSGCSLSYSYSFG----RRGPEGAHSCSLLERLGLIMKDDIV---DDDEILN--GDV 508
Query: 591 EEGEIF 596
EEGEI
Sbjct: 509 EEGEIL 514
>gi|297791027|ref|XP_002863398.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309233|gb|EFH39657.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 488
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 174/455 (38%), Positives = 265/455 (58%), Gaps = 57/455 (12%)
Query: 86 KRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSII 145
KR +E+ + K+ K+D + QC V+L+ LM H GW+F PVDPVKL+IPDYFS+I
Sbjct: 41 KRGPEELEDVQAKKKQKLDCDWSSQCLVLLRFLMEHRVGWLFEEPVDPVKLEIPDYFSVI 100
Query: 146 SKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
KPMDLGTVK++L +N+YS +DEF ADVRLTF+NAM YNPP N VH +A+E+ +F+++W
Sbjct: 101 RKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMRYNPPGNEVHTIAKEIKEIFEVRW 160
Query: 206 KSLEEKWSSEVPKAGLGKILSGKMMEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSS 265
K L++K S++ + + + +E + +R + P T S+ +K ++E +A
Sbjct: 161 KLLKKKMVSKLSGVEVTEGSKRQPVEFDCSRHSSPGTSASSGVFSAGSTKPAKENSA--- 217
Query: 266 YCARAVEVERAKPAQNLSSKLVIKNLHKGTNDGGRLACNIVNAKPPLSPVACKSCGKCGS 325
LSSK V K T P ++ A CG CG
Sbjct: 218 ----------------LSSKPVKAQSKKDT--------------PAVTLKALCKCGSCGR 247
Query: 326 ATCGCNLPSDSTHASSDITSERSLGGDRACSTDASKPDCQVKSTSTSQMSKSDPDSDGAV 385
C C S+ + + DCQVK+ S +Q S+SDP S+G+V
Sbjct: 248 IICICLKSCSSSGSEVSSLT-----------------DCQVKNISGAQTSESDPRSNGSV 290
Query: 386 SALDDGNLCPSSQLTPPATDSASAEEWTTPLLDV-QMSPKKALRAAMLKSRFADTILKAQ 444
++ ++ N +SQL P+ + E T + + P+KALRAA+LK+++A+TILKA+
Sbjct: 291 TSKNERNGSVNSQLDKPSNVALLDNELKTTFPALPPVPPEKALRAAILKAQYAETILKAK 350
Query: 445 QRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREKE 504
R +LD +KAD ++LQ EKE++E+ QREEKARIEA+++AA+ A+RM+A+ ELK++RE +
Sbjct: 351 HRVVLDQNNKADLIRLQIEKEQMERAQREEKARIEAEMRAAKVAARMRAQAELKQKRETQ 410
Query: 505 REAARVALQKMERTVEIEHN--LEILKELEMLSGC 537
R+ L KM++ + E N L++ K+ + GC
Sbjct: 411 ----RLELAKMKKGFDFEQNNHLKLEKDFVEVCGC 441
>gi|242070257|ref|XP_002450405.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
gi|241936248|gb|EES09393.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
Length = 605
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 193/489 (39%), Positives = 271/489 (55%), Gaps = 82/489 (16%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C I++ L+ H GW+F PVDPV IPDYF +I PMDLGTVK +L + Y +EF
Sbjct: 66 CGNIVRKLIDHKGGWLFKEPVDPVLYGIPDYFDVIHNPMDLGTVKNKLTKKQYVSIEEFA 125
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMM 230
ADVRLTFSNAM YNPPEN+VHK+A+ELN +FD +W+S+E K+ + P + + K+
Sbjct: 126 ADVRLTFSNAMKYNPPENDVHKVAKELNGIFDSEWESVERKFRVQNPVQEQQTMKAIKVR 185
Query: 231 EVNDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYCARAVEVERAKPAQNLSSKLVIKN 290
+ D++ P+ V +KP LV +
Sbjct: 186 GIMDSKSTVPR---------------------------ELVACSNSKP-------LVAR- 210
Query: 291 LHKGTNDGGRLACNIVNAKPPL-----SPVACKSCGKCGSATCGCNLPSDSTHASSDITS 345
G +AC+ + A L S V K + T ++P + +
Sbjct: 211 --------GPVACSNLIANKTLTDVLSSKVKIKFSVRSSERTSSKDIPVQAAG-----SK 257
Query: 346 ERSLG-----GDRACSTDASKPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLT 400
ERSL G++ S + + P C ++ S++ +SD S ++ +G+L + T
Sbjct: 258 ERSLNHSVPTGNKKASLNCTLP-CTKENAKISRIRESDRSS----GSIGNGSLLCNDTST 312
Query: 401 PPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKL 460
P SA EE + L D +SP KALRAAML+SRFA TI+KAQQ+ LLDHG DPVKL
Sbjct: 313 SPLASSAQGEE--SYLHDEPLSPSKALRAAMLRSRFAGTIVKAQQKALLDHGKNIDPVKL 370
Query: 461 QQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVE 520
+ EKERLE+RQ+EEKARIEAQ+KAAEAA++ K + E++ +RE+EREAAR+AL+ M++TV+
Sbjct: 371 KLEKERLEKRQQEEKARIEAQVKAAEAAAQRKFDEEMRMKREREREAARLALRMMKKTVD 430
Query: 521 IEHNLEILKELEMLSGCC-------LSPHLLNGSEAQKRAFKEAHFKNPLERIGLFMKSD 573
I+ N + LKELE S L ++G +PLER+GLFMK+D
Sbjct: 431 ID-NSDFLKELENFSETWQSNPPGKLIVDFIDGDLP-------PGLGSPLERLGLFMKND 482
Query: 574 YLVEDEDEE 582
+ EDE E+
Sbjct: 483 F--EDEVEQ 489
>gi|8885596|dbj|BAA97526.1| unnamed protein product [Arabidopsis thaliana]
Length = 506
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 167/453 (36%), Positives = 255/453 (56%), Gaps = 65/453 (14%)
Query: 95 GPKD-------KRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISK 147
GPK+ K+ ++D + QC +L+ LM H GW+F PVDPVK++IPDYF++I K
Sbjct: 62 GPKELDEVQPKKKQRLDCDWSSQCLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQK 121
Query: 148 PMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
PMDLGTVK++L +N+YS +DEF ADVRLTF+NAM YNP N VH +A+E+N +F+++W+S
Sbjct: 122 PMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRWES 181
Query: 208 LEEKWSSEVPKAGLGKILSGKMMEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYC 267
L +K K+L + N+ R+ K P+ S + S + +
Sbjct: 182 LMKK-----------KVLR---LSWNEVREGY-KRQPVERDCSRRSSTGTSASSG----- 221
Query: 268 ARAVEVERAKPAQNLSSKLVIKNLHKGTNDGGRLACNIVNAKPPLSPVACKSCGKCGSAT 327
V KPA+ +N KG+ + P ++P A +C KCG
Sbjct: 222 -----VGLTKPAK--------ENSEKGSLSSKPVKVQSKKNTPAVTPKALATC-KCGRII 267
Query: 328 CGCNLPSDSTHASSDITSERSLGGDRACSTDASKPDCQVKSTSTSQMSKSDPDSDGAVSA 387
C C + S S G D CS DCQ+K+ S +Q S+ DP S+G+ ++
Sbjct: 268 CIC------------LKSCSSFGSD-VCSLT----DCQLKNISGAQASELDPQSNGSDTS 310
Query: 388 LDDGNLCPSSQLTPPATDSASAEEWTTPLLDV-QMSPKKALRAAMLKSRFADTILKAQQR 446
+ N SQL P+ E T + + P+KALRAA+LK+++A TI+KA+ R
Sbjct: 311 KKERNGSLKSQLDKPSNSDLLGNELKTAFPALPPVPPEKALRAAILKAQYAGTIIKAKHR 370
Query: 447 TLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREKERE 506
+L +KAD +++Q EKE++E+ QREEKARIEA+++AA+ A RM+A+ ELK++RE +
Sbjct: 371 IVLGQNNKADLIRIQIEKEQMERAQREEKARIEAEMRAAKVAERMRAQDELKQKRESQ-- 428
Query: 507 AARVALQKMERTVEIEHN--LEILKELEMLSGC 537
R+ + KM++ + E N ++ K+ + GC
Sbjct: 429 --RLEIAKMKKGFDFERNNHSKLKKKFVKVCGC 459
>gi|30694987|ref|NP_199467.2| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|327488241|sp|Q9LS28.2|GTE12_ARATH RecName: Full=Transcription factor GTE12; AltName:
Full=Bromodomain-containing protein GTE12; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E12
gi|26451383|dbj|BAC42791.1| unknown protein [Arabidopsis thaliana]
gi|332008014|gb|AED95397.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 494
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 167/453 (36%), Positives = 255/453 (56%), Gaps = 65/453 (14%)
Query: 95 GPKD-------KRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISK 147
GPK+ K+ ++D + QC +L+ LM H GW+F PVDPVK++IPDYF++I K
Sbjct: 50 GPKELDEVQPKKKQRLDCDWSSQCLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQK 109
Query: 148 PMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
PMDLGTVK++L +N+YS +DEF ADVRLTF+NAM YNP N VH +A+E+N +F+++W+S
Sbjct: 110 PMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRWES 169
Query: 208 LEEKWSSEVPKAGLGKILSGKMMEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYC 267
L +K K+L + N+ R+ K P+ S + S + +
Sbjct: 170 LMKK-----------KVLR---LSWNEVREGY-KRQPVERDCSRRSSTGTSASSG----- 209
Query: 268 ARAVEVERAKPAQNLSSKLVIKNLHKGTNDGGRLACNIVNAKPPLSPVACKSCGKCGSAT 327
V KPA+ +N KG+ + P ++P A +C KCG
Sbjct: 210 -----VGLTKPAK--------ENSEKGSLSSKPVKVQSKKNTPAVTPKALATC-KCGRII 255
Query: 328 CGCNLPSDSTHASSDITSERSLGGDRACSTDASKPDCQVKSTSTSQMSKSDPDSDGAVSA 387
C C + S S G D CS DCQ+K+ S +Q S+ DP S+G+ ++
Sbjct: 256 CIC------------LKSCSSFGSD-VCSLT----DCQLKNISGAQASELDPQSNGSDTS 298
Query: 388 LDDGNLCPSSQLTPPATDSASAEEWTTPLLDV-QMSPKKALRAAMLKSRFADTILKAQQR 446
+ N SQL P+ E T + + P+KALRAA+LK+++A TI+KA+ R
Sbjct: 299 KKERNGSLKSQLDKPSNSDLLGNELKTAFPALPPVPPEKALRAAILKAQYAGTIIKAKHR 358
Query: 447 TLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREKERE 506
+L +KAD +++Q EKE++E+ QREEKARIEA+++AA+ A RM+A+ ELK++RE +
Sbjct: 359 IVLGQNNKADLIRIQIEKEQMERAQREEKARIEAEMRAAKVAERMRAQDELKQKRESQ-- 416
Query: 507 AARVALQKMERTVEIEHN--LEILKELEMLSGC 537
R+ + KM++ + E N ++ K+ + GC
Sbjct: 417 --RLEIAKMKKGFDFERNNHSKLKKKFVKVCGC 447
>gi|357134548|ref|XP_003568879.1| PREDICTED: transcription factor GTE8-like, partial [Brachypodium
distachyon]
Length = 574
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 195/528 (36%), Positives = 272/528 (51%), Gaps = 91/528 (17%)
Query: 54 QLMMSKPYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSV 113
Q+ +S SG + ++S ++P + + + K+K M+ QC
Sbjct: 12 QVYISSGSEDSGTDSEVEGSKRSQKSGVMPSSTYEHRP---SSKNKVESMNASQARQCKN 68
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+ LM H GW+F+ PVDPV IPDYF +I PMDLGTVK +L Y +DEF ADV
Sbjct: 69 VLEKLMGHTGGWLFHEPVDPVLFGIPDYFDVIRNPMDLGTVKKKLTNKNYPSTDEFAADV 128
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVN 233
RLTFSNAM YNPP N VH +A++LN +FD +WK E KW P
Sbjct: 129 RLTFSNAMKYNPPGNFVHTVAEQLNGIFDSEWKLYERKWRDRNP---------------- 172
Query: 234 DTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYCARAVEVERAKPAQNLSSKLVIKNLHK 293
P+ P V+V +A+ A+N SK V+
Sbjct: 173 -----VPERLP--------------------------VKVIKARAAEN--SKSVVPT--- 196
Query: 294 GTNDGGRLACNIVNAKPPLS-PVACKSCGKCGSATCGCNLPSDSTHASSDITSERSLGGD 352
G AC+ AK L+ ++ K K G D+ ++ G
Sbjct: 197 -----GLAACSNSLAKKTLTDAISSKVKIKFSVRGSGQTFSKDTPFQAA---------GS 242
Query: 353 RACSTDASKPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEW 412
+ S + P C ++T S+M S+ S S + + C + +P A+ +
Sbjct: 243 KEGSLNHYIP-CPKENTKISRMQSSEHSSQ---SNGNGSHTCSDTSTSPLASFEQGNGSY 298
Query: 413 TTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQR 472
L D +SP KALRAA+LK RFA TI+KAQQ+ LLDHG DP KLQ EKERLE+RQR
Sbjct: 299 ---LNDEPLSPTKALRAAILKGRFAGTIVKAQQKALLDHGQIIDPAKLQMEKERLEKRQR 355
Query: 473 EEKARIEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELE 532
EEKARIEAQ+KAAEAA+++K + E++ +RE++RE AR+ALQ M++TV+I+ N + LK+LE
Sbjct: 356 EEKARIEAQVKAAEAAAQLKLDEEMRMKREQQRETARLALQMMKKTVDID-NSDFLKDLE 414
Query: 533 MLSGCC-LSP------HLLNGSEAQKRAFKEAHFKNPLERIGLFMKSD 573
+S L+P L++G E +PLER+GLFMK D
Sbjct: 415 NMSKKWELNPPGRLIVDLVDGMELP------PGLGSPLERLGLFMKKD 456
>gi|297814970|ref|XP_002875368.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
gi|297321206|gb|EFH51627.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 182/541 (33%), Positives = 267/541 (49%), Gaps = 89/541 (16%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK L HP WVF PVD VKL+IPDY +II PMDLGTVK L +YS EF
Sbjct: 179 QCDTLLKKLWSHPHSWVFQAPVDVVKLNIPDYLTIIKHPMDLGTVKKNLASGVYSSPHEF 238
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
ADVRLTF+NAM YNPP ++VH M L+ LF+ +WK++E+K +P + + L
Sbjct: 239 AADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIEKK----LPACSM-QTLPAIT 293
Query: 230 MEVNDTRQNCPKTPPLHSTLSSKKSKMSE--EKAARSSYCARAVEVERAKPAQNLSSKL- 286
+E ND R+ PP +KK KM+ ++ ER + + L S L
Sbjct: 294 LEPNDERKAAISVPP------AKKRKMASPVRESVPEPVKPLMTAEERHRLGRQLESLLD 347
Query: 287 -----VIKNLHKGTNDGGRLACN-------------IVNAKPPLSP-VACKSCGKCGSAT 327
+I L K +++GG +A + +V + L + K +
Sbjct: 348 ELPAHIIDFLKKHSSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQNKETKQSNVEP 407
Query: 328 CGCNL-----PSDSTHASSDITSERSLGGDR---------------ACSTDASKPDCQVK 367
C L PS+S+ + ++ +GG+ +D +KP Q
Sbjct: 408 CEIELINGSGPSNSSLQRGNELADEYVGGNEPPISRSSSDSDSGSSEDQSDDAKPMVQED 467
Query: 368 STSTSQMSKSDPDSD------------GAVSALDDGNLCPSSQLTPPATDSASAEEWTTP 415
+ + S+ D + AL+ ++C SQ P + +S E
Sbjct: 468 YSKMPETGNSEAQRDENTRIDDLFGGSQSTGALEQMDIC--SQQKPSSDESDIQHEGN-- 523
Query: 416 LLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEK 475
+L+ +S +K RAA+LK+RFAD ILKA+++ L +G K DP +L++E+E LE ++++EK
Sbjct: 524 ILETPVSSEKRYRAALLKNRFADIILKAREKPLPQNGIKGDPERLRKEREELELQKKKEK 583
Query: 476 ARIEAQIKAAEAASRMKAEIELKKQREK-------EREAARVALQKMERTVEIEHNLEIL 528
AR++A+ KAAE A R + + EREAAR AL KME+TVEI N L
Sbjct: 584 ARLQAEAKAAEDARRQAEAEAAAEAAAEAKRKRELEREAARQALLKMEKTVEINENSRFL 643
Query: 529 KELEMLSGCCLSPHLLNGS------EAQKRAFKEAHFK--NPLERIGLFMKSDYLVEDED 580
++LEMLS P L S E A + + NPLE++GL+MK D +DE+
Sbjct: 644 EDLEMLSSSA--PEQLPSSADETSPEKPLDALGSFNLRGSNPLEQLGLYMKQD---DDEE 698
Query: 581 E 581
E
Sbjct: 699 E 699
>gi|15232127|ref|NP_189362.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|327488239|sp|Q9LK27.2|GTE8_ARATH RecName: Full=Transcription factor GTE8; AltName:
Full=Bromodomain-containing protein GTE8; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E8
gi|332643763|gb|AEE77284.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 813
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 176/541 (32%), Positives = 265/541 (48%), Gaps = 89/541 (16%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +L+ L HP WVF PVD VKL+IPDY + I PMDLGTVK L +YS EF
Sbjct: 179 QCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEF 238
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
ADVRLTF+NAM YNPP ++VH M L+ LF+ +WK++++K +P + + L
Sbjct: 239 AADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKK----LPPCSM-QTLPAVT 293
Query: 230 MEVNDTRQNCPKTPPLHSTLSSKKSKMSE--EKAARSSYCARAVEVERAKPAQNLSSKL- 286
+E ND R+ PP +KK KM+ ++ EVER + + L S L
Sbjct: 294 LEPNDERKAAISVPP------AKKRKMASPVRESVPEPVKPLMTEVERHRLGRQLESLLD 347
Query: 287 -----VIKNLHKGTNDGGRLACN-------------IVNAKPPLSP-VACKSCGKCGSAT 327
+I L K ++GG +A + +V + L + K +
Sbjct: 348 ELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQNKEAKQTNVEP 407
Query: 328 CGCNL-----PSDSTHASSDITSERSLGGDR---------------ACSTDASKPDCQVK 367
C L PS+S+ + ++ + G+ +D +KP Q
Sbjct: 408 CEIELINGSRPSNSSLQRGNEMADEYVDGNEPPISRSSSDSDSGSSEDQSDDAKPMVQGD 467
Query: 368 STSTSQMSKSDPDSD------------GAVSALDDGNLCPSSQLTPPATDSASAEEWTTP 415
S+ + + S+ D + AL+ ++C +L+ +D +
Sbjct: 468 SSKMPETANSEAQRDENTRIDDLFVGSQSTGALEQMDICSQQKLSSDESDG----QHEGN 523
Query: 416 LLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEK 475
+L+ S +K RAA+LK+RFAD ILKA+++ L +G K DP +L++E+E L ++++EK
Sbjct: 524 ILETPASSEKRYRAALLKNRFADIILKAREKPLPQNGIKGDPERLRKEREELVLQKKKEK 583
Query: 476 ARIEAQIKAAEAASRMKAEIELKKQREK-------EREAARVALQKMERTVEIEHNLEIL 528
AR++A+ +AAE A R + + EREAAR AL KME+TVEI N L
Sbjct: 584 ARLQAEAEAAEDARRQAEAEAAAEAAAEAKRKRELEREAARQALLKMEKTVEINENSRFL 643
Query: 529 KELEMLSGCCLSPHLLNGS------EAQKRAFKEAHFK--NPLERIGLFMKSDYLVEDED 580
++LEMLS P L S E A + + NPLE++GL+MK D +DE+
Sbjct: 644 EDLEMLSSSA--PEQLPSSAEETSPERPLDALGSFNLRGSNPLEQLGLYMKQD---DDEE 698
Query: 581 E 581
E
Sbjct: 699 E 699
>gi|334185652|ref|NP_001189985.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|332643764|gb|AEE77285.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 764
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 176/541 (32%), Positives = 265/541 (48%), Gaps = 89/541 (16%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +L+ L HP WVF PVD VKL+IPDY + I PMDLGTVK L +YS EF
Sbjct: 130 QCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEF 189
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
ADVRLTF+NAM YNPP ++VH M L+ LF+ +WK++++K +P + + L
Sbjct: 190 AADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKK----LPPCSM-QTLPAVT 244
Query: 230 MEVNDTRQNCPKTPPLHSTLSSKKSKMSE--EKAARSSYCARAVEVERAKPAQNLSSKL- 286
+E ND R+ PP +KK KM+ ++ EVER + + L S L
Sbjct: 245 LEPNDERKAAISVPP------AKKRKMASPVRESVPEPVKPLMTEVERHRLGRQLESLLD 298
Query: 287 -----VIKNLHKGTNDGGRLACN-------------IVNAKPPLSP-VACKSCGKCGSAT 327
+I L K ++GG +A + +V + L + K +
Sbjct: 299 ELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQNKEAKQTNVEP 358
Query: 328 CGCNL-----PSDSTHASSDITSERSLGGDR---------------ACSTDASKPDCQVK 367
C L PS+S+ + ++ + G+ +D +KP Q
Sbjct: 359 CEIELINGSRPSNSSLQRGNEMADEYVDGNEPPISRSSSDSDSGSSEDQSDDAKPMVQGD 418
Query: 368 STSTSQMSKSDPDSD------------GAVSALDDGNLCPSSQLTPPATDSASAEEWTTP 415
S+ + + S+ D + AL+ ++C +L+ +D +
Sbjct: 419 SSKMPETANSEAQRDENTRIDDLFVGSQSTGALEQMDICSQQKLSSDESDG----QHEGN 474
Query: 416 LLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEK 475
+L+ S +K RAA+LK+RFAD ILKA+++ L +G K DP +L++E+E L ++++EK
Sbjct: 475 ILETPASSEKRYRAALLKNRFADIILKAREKPLPQNGIKGDPERLRKEREELVLQKKKEK 534
Query: 476 ARIEAQIKAAEAASRMKAEIELKKQREK-------EREAARVALQKMERTVEIEHNLEIL 528
AR++A+ +AAE A R + + EREAAR AL KME+TVEI N L
Sbjct: 535 ARLQAEAEAAEDARRQAEAEAAAEAAAEAKRKRELEREAARQALLKMEKTVEINENSRFL 594
Query: 529 KELEMLSGCCLSPHLLNGS------EAQKRAFKEAHFK--NPLERIGLFMKSDYLVEDED 580
++LEMLS P L S E A + + NPLE++GL+MK D +DE+
Sbjct: 595 EDLEMLSSSA--PEQLPSSAEETSPERPLDALGSFNLRGSNPLEQLGLYMKQD---DDEE 649
Query: 581 E 581
E
Sbjct: 650 E 650
>gi|218199690|gb|EEC82117.1| hypothetical protein OsI_26141 [Oryza sativa Indica Group]
Length = 484
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 80/116 (68%)
Query: 97 KDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKT 156
K+K M+ + QC ILK LM H +GW+FN PVDPV IPDYF +I PMDLGTVK
Sbjct: 51 KNKVDPMNTSKSRQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKR 110
Query: 157 RLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
+L YS EF ADVRLTFSNAM YNPP N+VH +A +LN +FD +WK LE KW
Sbjct: 111 KLTSKQYSNPYEFAADVRLTFSNAMKYNPPGNDVHAIADQLNKIFDSEWKLLERKW 166
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 128/185 (69%), Gaps = 18/185 (9%)
Query: 422 SPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQ 481
SP KALRAAMLKSRFA TI+KAQQ+ LLDHG K DPVKLQ EKERLE+RQ+EEKARIEAQ
Sbjct: 303 SPSKALRAAMLKSRFAGTIVKAQQKALLDHGKKIDPVKLQLEKERLEKRQQEEKARIEAQ 362
Query: 482 IKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCC-LS 540
+KAAEAA+++K + E++ +RE+ER AAR+AL M++TV+I+ N + LK+LE LS L+
Sbjct: 363 VKAAEAAAQLKLDEEMRMKREQERRAARLALHMMKKTVDID-NSDFLKDLENLSKKWELN 421
Query: 541 P------HLLNGSEAQKRAFKEAHFKNPLERIGLFMKSDY----LVEDEDEEILNLDGDG 590
P ++G + +PLER+GLFMK D E ED + + D
Sbjct: 422 PPGKLIVDFVDGIDL------PPGLGSPLERLGLFMKKDLEEEVEHEMEDSVSPSTEIDV 475
Query: 591 EEGEI 595
EEGEI
Sbjct: 476 EEGEI 480
>gi|115472285|ref|NP_001059741.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|33146482|dbj|BAC79591.1| putative RING3 protein [Oryza sativa Japonica Group]
gi|113611277|dbj|BAF21655.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|215717115|dbj|BAG95478.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 484
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 80/116 (68%)
Query: 97 KDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKT 156
K+K M+ + QC ILK LM H +GW+FN PVDPV IPDYF +I PMDLGTVK
Sbjct: 51 KNKVDPMNTSKSRQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKR 110
Query: 157 RLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
+L YS EF ADVRLTFSNAM YNPP N+VH +A +LN +FD +WK LE KW
Sbjct: 111 KLTSKQYSNPYEFAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEWKLLERKW 166
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 127/185 (68%), Gaps = 18/185 (9%)
Query: 422 SPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQ 481
SP KALRAAMLKSRFA TI+KAQQ+ LLDHG K DP KLQ EKERLE+RQ+EEKARIEAQ
Sbjct: 303 SPSKALRAAMLKSRFAGTIVKAQQKALLDHGKKIDPAKLQLEKERLEKRQQEEKARIEAQ 362
Query: 482 IKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCC-LS 540
+KAAEAA+++K + E++ +RE+ER AAR+AL M++TV+I+ N + LK+LE LS L+
Sbjct: 363 VKAAEAAAQLKLDEEMRMKREQERRAARLALHMMKKTVDID-NSDFLKDLENLSKKWELN 421
Query: 541 P------HLLNGSEAQKRAFKEAHFKNPLERIGLFMKSDY----LVEDEDEEILNLDGDG 590
P ++G + +PLER+GLFMK D E ED + + D
Sbjct: 422 PPGKLIVDFVDGIDL------PPGLGSPLERLGLFMKKDLEEEVEHEMEDSVSPSTEIDV 475
Query: 591 EEGEI 595
EEGEI
Sbjct: 476 EEGEI 480
>gi|222637108|gb|EEE67240.1| hypothetical protein OsJ_24385 [Oryza sativa Japonica Group]
Length = 536
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 80/116 (68%)
Query: 97 KDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKT 156
K+K M+ + QC ILK LM H +GW+FN PVDPV IPDYF +I PMDLGTVK
Sbjct: 103 KNKVDPMNTSKSRQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKR 162
Query: 157 RLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
+L YS EF ADVRLTFSNAM YNPP N+VH +A +LN +FD +WK LE KW
Sbjct: 163 KLTSKQYSNPYEFAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEWKLLERKW 218
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 127/185 (68%), Gaps = 18/185 (9%)
Query: 422 SPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQ 481
SP KALRAAMLKSRFA TI+KAQQ+ LLDHG K DP KLQ EKERLE+RQ+EEKARIEAQ
Sbjct: 355 SPSKALRAAMLKSRFAGTIVKAQQKALLDHGKKIDPAKLQLEKERLEKRQQEEKARIEAQ 414
Query: 482 IKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCC-LS 540
+KAAEAA+++K + E++ +RE+ER AAR+AL M++TV+I+ N + LK+LE LS L+
Sbjct: 415 VKAAEAAAQLKLDEEMRMKREQERRAARLALHMMKKTVDID-NSDFLKDLENLSKKWELN 473
Query: 541 P------HLLNGSEAQKRAFKEAHFKNPLERIGLFMKSDY----LVEDEDEEILNLDGDG 590
P ++G + +PLER+GLFMK D E ED + + D
Sbjct: 474 PPGKLIVDFVDGIDL------PPGLGSPLERLGLFMKKDLEEEVEHEMEDSVSPSTEIDV 527
Query: 591 EEGEI 595
EEGEI
Sbjct: 528 EEGEI 532
>gi|449455878|ref|XP_004145677.1| PREDICTED: transcription factor GTE8-like [Cucumis sativus]
Length = 750
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 78/103 (75%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK +M H WVFN PVD VKL++PDYF+II PMDLGTVK++L YS +F
Sbjct: 188 QCEQLLKRVMSHQYAWVFNTPVDVVKLNLPDYFTIIKHPMDLGTVKSKLSSGAYSSPLDF 247
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
+ADVRLTFSNAM YNPP N+VH MA LN+ FD++WK++E+K
Sbjct: 248 LADVRLTFSNAMTYNPPGNDVHVMADVLNSYFDMRWKAIEKKL 290
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 19/209 (9%)
Query: 401 PPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKL 460
P +T+S ++ + +SP++ RAA+LK+RFADTIL+A+++T+ GDK DP KL
Sbjct: 546 PSSTESDCNQDGNYTASEKPVSPERLYRAALLKNRFADTILRAKEKTMT-QGDKGDPEKL 604
Query: 461 QQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREK---EREAARVALQKMER 517
++E+E LE QR+EKAR++A+ KAA+ A R + + K +REAAR AL ++E+
Sbjct: 605 RREREELELEQRKEKARLQAEAKAAQDAQRRAEAEAAAEAKRKRELDREAARQALLQIEK 664
Query: 518 TVEIEHNLEILKELEMLSGCCLSPHLLNGSEAQKRAFKE--AHFK----NPLERIGLFMK 571
TV I+ N + L++LEML +G E ++ FK NPLE++GLF+K
Sbjct: 665 TVIIDENSQFLEDLEMLRAAPAEQLPSSGDETSPDHSQDGLGSFKFVGSNPLEQLGLFIK 724
Query: 572 SDYLVEDEDEEI-----LNLDGDGEEGEI 595
+D +EDEEI N D EEGEI
Sbjct: 725 AD----EEDEEIEPNFVSNSIKDVEEGEI 749
>gi|449440580|ref|XP_004138062.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
gi|449501388|ref|XP_004161353.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
Length = 781
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 79/103 (76%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +L+ LM H GWVFN PVD VKL+IPDYF++I PMDLGTVK++L Y+ +F
Sbjct: 208 QCEQLLQRLMSHTFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKSKLTAGEYTHPLDF 267
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
ADVRLTFSNAM YNPP N+VH MA+ L+ F+++WK++E+K+
Sbjct: 268 AADVRLTFSNAMTYNPPANDVHTMAKTLSKFFEVRWKTIEKKF 310
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 106/161 (65%), Gaps = 10/161 (6%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
Q+SP + RAA+L++RFADTILKA+++ L + GDK DP K++ E+E LE++QREEKAR++
Sbjct: 593 QVSPDRLYRAALLRNRFADTILKAREKAL-EKGDKRDPEKVRMEREELERQQREEKARLQ 651
Query: 480 AQIKAAEAASRMKAEIELKKQREK---EREAARVALQKMERTVEIEHNLEILKELEML-- 534
A+ KAAE A R + ++K +REAAR AL KME+TV+I N + +++LEML
Sbjct: 652 AEAKAAEDARRKAEAEAAAEAKKKRELDREAARQALLKMEKTVDINENSQFMEDLEMLRA 711
Query: 535 SGCCLSPHLLNGSEAQKRAFKEAHFK----NPLERIGLFMK 571
S L P+ S + FK NPLE++GL+MK
Sbjct: 712 SNDELLPNFTEESSPEHSQNGFGSFKLQGSNPLEQLGLYMK 752
>gi|334187679|ref|NP_001190308.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|332004628|gb|AED92011.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 689
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK LM H GWVFN PVD VKL+I DYF++I PMDLGTVK +L YS EF
Sbjct: 140 QCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCPSEF 199
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
ADVRLTFSNAM YNPP N+V+ MA L F+++WK+LE+K S
Sbjct: 200 AADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLS 243
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 117/198 (59%), Gaps = 33/198 (16%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
Q+ P+K+ RAA+LK+RFAD ILKA+++ L + D DP KLQ+E+E LE ++++EKAR++
Sbjct: 502 QLPPEKSYRAAILKNRFADIILKAREKPL-NQNDTRDPEKLQREREELELQKKKEKARLQ 560
Query: 480 AQIKAAEAASRMKAEIELKKQR-------EKEREAARVALQKMERTVEIEHNLEILKELE 532
A+ KAAE A R + E EREAAR AL +ME++VE+ N + L++LE
Sbjct: 561 AEAKAAEEARRKAEAQAAAEAAAEAKRKLELEREAARQALMEMEQSVELNENAKFLEDLE 620
Query: 533 MLSGCCLSPHLLN------GSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDE----- 581
+L + HL N G + R+F NPLE++GLFMK D EDE+E
Sbjct: 621 LLK-TVDTDHLTNTIEEEDGPDVGLRSFSFGG-SNPLEQLGLFMKQD---EDEEEADPLT 675
Query: 582 ----EILNLDGDGEEGEI 595
EI D EEGEI
Sbjct: 676 SPAPEI-----DIEEGEI 688
>gi|18417335|ref|NP_568297.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|75163656|sp|Q93YS6.1|GTE9_ARATH RecName: Full=Transcription factor GTE9; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 9; Short=AtBET9;
AltName: Full=Bromodomain-containing protein GTE9;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E9
gi|16604681|gb|AAL24133.1| putative kinase [Arabidopsis thaliana]
gi|332004627|gb|AED92010.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 688
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK LM H GWVFN PVD VKL+I DYF++I PMDLGTVK +L YS EF
Sbjct: 140 QCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCPSEF 199
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
ADVRLTFSNAM YNPP N+V+ MA L F+++WK+LE+K S
Sbjct: 200 AADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLS 243
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 117/198 (59%), Gaps = 33/198 (16%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
Q+ P+K+ RAA+LK+RFAD ILKA+++ L + D DP KLQ+E+E LE ++++EKAR++
Sbjct: 501 QLPPEKSYRAAILKNRFADIILKAREKPL-NQNDTRDPEKLQREREELELQKKKEKARLQ 559
Query: 480 AQIKAAEAASRMKAEIELKKQR-------EKEREAARVALQKMERTVEIEHNLEILKELE 532
A+ KAAE A R + E EREAAR AL +ME++VE+ N + L++LE
Sbjct: 560 AEAKAAEEARRKAEAQAAAEAAAEAKRKLELEREAARQALMEMEQSVELNENAKFLEDLE 619
Query: 533 MLSGCCLSPHLLN------GSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDE----- 581
+L + HL N G + R+F NPLE++GLFMK D EDE+E
Sbjct: 620 LLK-TVDTDHLTNTIEEEDGPDVGLRSFSFGG-SNPLEQLGLFMKQD---EDEEEADPLT 674
Query: 582 ----EILNLDGDGEEGEI 595
EI D EEGEI
Sbjct: 675 SPAPEI-----DIEEGEI 687
>gi|449492943|ref|XP_004159148.1| PREDICTED: transcription factor GTE9-like [Cucumis sativus]
Length = 491
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 78/102 (76%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK +M H WVFN PVD VKL++PDYF+II PMDLGTVK++L YS +F
Sbjct: 139 QCEQLLKRVMSHQYAWVFNTPVDVVKLNLPDYFTIIKHPMDLGTVKSKLSSGAYSSPLDF 198
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
+ADVRLTFSNAM YNPP N+VH MA LN+ FD++WK++E+K
Sbjct: 199 LADVRLTFSNAMTYNPPGNDVHVMADVLNSYFDMRWKAIEKK 240
>gi|7573452|emb|CAB87766.1| kinase-like protein [Arabidopsis thaliana]
Length = 703
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK LM H GWVFN PVD VKL+I DYF++I PMDLGTVK +L YS EF
Sbjct: 140 QCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCPSEF 199
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
ADVRLTFSNAM YNPP N+V+ MA L F+++WK+LE+K S
Sbjct: 200 AADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLS 243
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 114/198 (57%), Gaps = 36/198 (18%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
Q+ P+K+ RAA+LK+RFAD ILKA+++ L + D DP KLQ+E+E LE ++++EKAR++
Sbjct: 519 QLPPEKSYRAAILKNRFADIILKAREKPL-NQNDTRDPEKLQREREELELQKKKEKARLQ 577
Query: 480 AQIKAAEAASRMKAEIELKKQR-------EKEREAARVALQKMERTVEIEHNLEILKELE 532
A+ KAAE A R + E EREAAR AL + +VE+ N + L++LE
Sbjct: 578 AEAKAAEEARRKAEAQAAAEAAAEAKRKLELEREAARQALME---SVELNENAKFLEDLE 634
Query: 533 MLSGCCLSPHLLN------GSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDE----- 581
+L + HL N G + R+F NPLE++GLFMK D EDE+E
Sbjct: 635 LLK-TVDTDHLTNTIEEEDGPDVGLRSFSFGG-SNPLEQLGLFMKQD---EDEEEADPLT 689
Query: 582 ----EILNLDGDGEEGEI 595
EI D EEGEI
Sbjct: 690 SPAPEI-----DIEEGEI 702
>gi|222422933|dbj|BAH19453.1| AT5G14270 [Arabidopsis thaliana]
Length = 549
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK LM H GWVFN PVD VKL+I DYF++I PMDLGTVK +L YS EF
Sbjct: 140 QCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCPSEF 199
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
ADVRLTFSNAM YNPP N+V+ MA L F+++WK+LE+K S
Sbjct: 200 AADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLS 243
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLE 468
Q+ P+K+ RAA+LK+RFAD ILKA+++ L+ D DP KLQ+E+E LE
Sbjct: 501 QLPPEKSYRAAILKNRFADIILKAREKP-LNQNDTRDPEKLQREREELE 548
>gi|326492620|dbj|BAJ90166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 77/115 (66%)
Query: 98 DKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTR 157
+K M+ T C IL LM HP GW+F++PVDP IPDYF +I PMDLGTVK +
Sbjct: 71 NKAGSMNASKTRVCRNILGKLMDHPGGWLFHKPVDPDLFGIPDYFDVIRNPMDLGTVKKK 130
Query: 158 LDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
L Y +D+F ADVRLTFSNAM YNPP N VH +A++LN +F+ +W S E KW
Sbjct: 131 LTNKSYLSTDDFAADVRLTFSNAMTYNPPGNQVHTVAEQLNIMFNSEWTSYERKW 185
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 115/158 (72%), Gaps = 14/158 (8%)
Query: 421 MSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEA 480
+SP KALRAAMLK RFA TI+KAQQ+ LLDHG + DP KL+ EKERLE+RQ+EEK RIEA
Sbjct: 325 LSPTKALRAAMLKRRFAGTIVKAQQKALLDHGQQIDPAKLKLEKERLEKRQQEEKERIEA 384
Query: 481 QIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCC-L 539
Q+KAAEAA++ K + EL+K+RE+EREAAR+AL M++TV+I+ N + LK+LE +S L
Sbjct: 385 QVKAAEAAAQYKLDEELRKKREREREAARLALHMMKKTVDID-NSDFLKDLENISKKWEL 443
Query: 540 SP------HLLNGSEAQKRAFKEAHFKNPLERIGLFMK 571
+P ++G E +PLER+GLFMK
Sbjct: 444 NPPAKLIVDFVDGMEL------PPGLGSPLERLGLFMK 475
>gi|359488601|ref|XP_002270843.2| PREDICTED: transcription factor GTE8-like [Vitis vinifera]
Length = 739
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 76/102 (74%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK LM H GWVFN PVD VKL+IPDYF+II PMDLGT+K ++ YS +F
Sbjct: 177 QCETLLKQLMSHQHGWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIKGKIASGAYSSPLDF 236
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
ADVRLTFSNA +NPP N+VHKMA L+ F+++WK++E+K
Sbjct: 237 AADVRLTFSNAQTFNPPGNDVHKMADTLSKFFEVRWKTIEKK 278
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 135/222 (60%), Gaps = 14/222 (6%)
Query: 384 AVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKA 443
+VS +D L +SQ P +S S ++ + L D Q+SP+K RAA+LK+RFADTI KA
Sbjct: 521 SVSGVD--QLEQTSQQKPNYVESDSQQDGES-LTDRQVSPEKLYRAAVLKNRFADTIFKA 577
Query: 444 QQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREK 503
+++TL + G+K DP KL++E+E LE ++R+EKAR++A+ KAAE A R + ++K
Sbjct: 578 REKTL-NQGEKGDPEKLRREREELEMQRRKEKARLQAEAKAAEDARRRAEAEAAAEAKKK 636
Query: 504 ---EREAARVALQKMERTVEIEHNLEILKELEMLSGCCLS--PHLLNGSEAQKRAFKEAH 558
ER AAR ALQKME+TVEI N L++LE+L P ++ + +
Sbjct: 637 RELERAAARQALQKMEKTVEINENSRFLEDLELLRAAPAEHLPSSVDETSPDHSQDGLSG 696
Query: 559 FK----NPLERIGLFMKSDYLVED-EDEEILNLDGDGEEGEI 595
F+ NPLE++GL+MK D ED E ++ D EEGEI
Sbjct: 697 FRFVGSNPLEQLGLYMKVDDEEEDGEPHSPPDVVNDVEEGEI 738
>gi|296090258|emb|CBI40077.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 76/102 (74%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK LM H GWVFN PVD VKL+IPDYF+II PMDLGT+K ++ YS +F
Sbjct: 154 QCETLLKQLMSHQHGWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIKGKIASGAYSSPLDF 213
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
ADVRLTFSNA +NPP N+VHKMA L+ F+++WK++E+K
Sbjct: 214 AADVRLTFSNAQTFNPPGNDVHKMADTLSKFFEVRWKTIEKK 255
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 135/222 (60%), Gaps = 14/222 (6%)
Query: 384 AVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKA 443
+VS +D L +SQ P +S S ++ + L D Q+SP+K RAA+LK+RFADTI KA
Sbjct: 496 SVSGVD--QLEQTSQQKPNYVESDSQQDGES-LTDRQVSPEKLYRAAVLKNRFADTIFKA 552
Query: 444 QQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREK 503
+++TL + G+K DP KL++E+E LE ++R+EKAR++A+ KAAE A R + ++K
Sbjct: 553 REKTL-NQGEKGDPEKLRREREELEMQRRKEKARLQAEAKAAEDARRRAEAEAAAEAKKK 611
Query: 504 ---EREAARVALQKMERTVEIEHNLEILKELEMLSGCCLS--PHLLNGSEAQKRAFKEAH 558
ER AAR ALQKME+TVEI N L++LE+L P ++ + +
Sbjct: 612 RELERAAARQALQKMEKTVEINENSRFLEDLELLRAAPAEHLPSSVDETSPDHSQDGLSG 671
Query: 559 FK----NPLERIGLFMKSDYLVED-EDEEILNLDGDGEEGEI 595
F+ NPLE++GL+MK D ED E ++ D EEGEI
Sbjct: 672 FRFVGSNPLEQLGLYMKVDDEEEDGEPHSPPDVVNDVEEGEI 713
>gi|297807455|ref|XP_002871611.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
gi|297317448|gb|EFH47870.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
Length = 690
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK LM H GWVFN PVD VKL+I DYF++I PMDLGTVK +L YS EF
Sbjct: 140 QCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIKHPMDLGTVKNKLTSGTYSCPSEF 199
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
ADVRLTFSNAM YNPP N+V MA L F+++WK+LE+K S
Sbjct: 200 AADVRLTFSNAMTYNPPGNDVFVMADTLRKFFEVRWKTLEKKLS 243
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 113/193 (58%), Gaps = 21/193 (10%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
Q+ P+K RAA LK+RFAD ILKA+++ L + D DP KLQ+E+E LE ++++EKAR++
Sbjct: 501 QLPPEKIYRAAFLKNRFADIILKAREKPL-NQNDLRDPEKLQREREELELQKKKEKARLQ 559
Query: 480 AQIKAAEAASRMKAEIELKKQR-------EKEREAARVALQKMERTVEIEHNLEILKELE 532
A+ KAAE A R + E EREAAR AL +ME++VE+ N + LK+LE
Sbjct: 560 AEAKAAEEARRKAEAQAAAEAAAEAKRKLELEREAARQALMEMEQSVELNENAKFLKDLE 619
Query: 533 MLSGCCLSPHLL-----NGSEAQKRAFKEAHF--KNPLERIGLFMKSDYLVEDEDEEILN 585
+L + HL +G + + F NPLE++GLFMK D +DE+ + L
Sbjct: 620 LLK-TVDTDHLTDAIEEDGPDVSHDGLRSFSFGGSNPLEQLGLFMKQDE--DDEEADPLT 676
Query: 586 LDGDG---EEGEI 595
G EEGEI
Sbjct: 677 SPAPGIDIEEGEI 689
>gi|326494522|dbj|BAJ94380.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 77/115 (66%)
Query: 98 DKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTR 157
+K M+ T C IL LM HP GW+F++PVDP IPDYF +I PMDLGTVK +
Sbjct: 71 NKAGSMNASKTRVCRNILGKLMDHPGGWLFHKPVDPDLFGIPDYFDVIRNPMDLGTVKKK 130
Query: 158 LDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
L Y +D+F ADVRLTFSNAM YNPP N VH +A++LN +F+ +W S E KW
Sbjct: 131 LTNKSYLSTDDFAADVRLTFSNAMTYNPPGNQVHTVAEQLNIMFNSEWTSYERKW 185
>gi|395146565|gb|AFN53717.1| putative bromodomain-containing protein [Linum usitatissimum]
Length = 216
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 76/95 (80%)
Query: 103 MDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
MDR + QCS +LK L+ HP GW+F++PVDPV+L+IPDYF+II+ PMDLGT+ ++L +
Sbjct: 1 MDRTTSQQCSALLKVLLGHPYGWIFSKPVDPVELNIPDYFTIITNPMDLGTINSKLSKKK 60
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQEL 197
Y +++F ADVRLTF+NAMLYNPP N+VH A EL
Sbjct: 61 YFGAEDFAADVRLTFANAMLYNPPSNSVHTTALEL 95
>gi|9294219|dbj|BAB02121.1| unnamed protein product [Arabidopsis thaliana]
Length = 818
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 111/201 (55%), Gaps = 19/201 (9%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +L+ L HP WVF PVD VKL+IPDY + I PMDLGTVK L +YS EF
Sbjct: 179 QCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEF 238
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
ADVRLTF+NAM YNPP ++VH M L+ LF+ +WK++++K +P + + L
Sbjct: 239 AADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKK----LPPCSM-QTLPAVT 293
Query: 230 MEVNDTRQNCPKTPPLHSTLSSKKSKMSE--EKAARSSYCARAVEVERAKPAQNLSSKL- 286
+E ND R+ PP +KK KM+ ++ EVER + + L S L
Sbjct: 294 LEPNDERKAAISVPP------AKKRKMASPVRESVPEPVKPLMTEVERHRLGRQLESLLD 347
Query: 287 -----VIKNLHKGTNDGGRLA 302
+I L K ++GG +A
Sbjct: 348 ELPAHIIDFLKKHNSNGGEIA 368
>gi|414588437|tpg|DAA39008.1| TPA: hypothetical protein ZEAMMB73_513409 [Zea mays]
Length = 577
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 128/190 (67%), Gaps = 19/190 (10%)
Query: 400 TPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVK 459
T P S EE + L D +SP +ALRAAML+SRFA TI+KAQQ+ LLDHG DPVK
Sbjct: 310 TSPLASSVQGEE--SYLHDEPLSPSRALRAAMLRSRFAGTIVKAQQKALLDHGKNIDPVK 367
Query: 460 LQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTV 519
LQ EKERLE+RQ+EEKARIEAQ+KAAEAA++ K E E++ +R++EREAAR+AL+ M++TV
Sbjct: 368 LQLEKERLEKRQQEEKARIEAQVKAAEAAAQQKFEEEMRMKRKQEREAARLALRMMKKTV 427
Query: 520 EIEHNLEILKELEMLSGCC-------LSPHLLNGSEAQKRAFKEAHFKNPLERIGLFMKS 572
+I+ N + LKELE S L ++G +PLER+GLFMK
Sbjct: 428 DID-NSDFLKELENFSKTWQANPPGKLIVDFISGDLP-------PGLGSPLERLGLFMKE 479
Query: 573 DYLVEDEDEE 582
D+ EDE E+
Sbjct: 480 DF--EDEVEQ 487
>gi|413925460|gb|AFW65392.1| hypothetical protein ZEAMMB73_923875 [Zea mays]
Length = 613
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 123/181 (67%), Gaps = 17/181 (9%)
Query: 400 TPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVK 459
T P S EE + L D +SP +ALRAAML+SRFA TI+KAQQ+ LLDHG DPVK
Sbjct: 311 TSPIASSVQGEE--SYLCDEPLSPSRALRAAMLRSRFAGTIVKAQQKALLDHGKNIDPVK 368
Query: 460 LQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTV 519
LQ EKERLE+RQ+EEKARIEAQ+KAAEAA++ K E E++ +RE+EREAAR+A++ M++TV
Sbjct: 369 LQLEKERLEKRQQEEKARIEAQVKAAEAAAQQKFEEEMRVKREQEREAARLAVRMMKKTV 428
Query: 520 EIEHNLEILKELEMLSGCC-------LSPHLLNGSEAQKRAFKEAHFKNPLERIGLFMKS 572
+I+ N + LKELE S L ++G +PLER+GLFMK+
Sbjct: 429 DID-NSDFLKELENFSKTWQSNPPGKLIVDFIDGDLP-------PGLGSPLERLGLFMKN 480
Query: 573 D 573
D
Sbjct: 481 D 481
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 72/102 (70%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C I++ L+ H GW+F PVDP IPDYF +I PMDLGTVK +L + Y +EF
Sbjct: 66 CGNIVRKLIDHKGGWLFKDPVDPDLYKIPDYFDVIRNPMDLGTVKNKLTKKKYVSIEEFA 125
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
ADVRLTFSNAM YNPP N+VH A+ELN +FD +W+S+E K+
Sbjct: 126 ADVRLTFSNAMKYNPPGNDVHAFARELNEIFDSEWESVERKF 167
>gi|255540327|ref|XP_002511228.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223550343|gb|EEF51830.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 759
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 81/118 (68%), Gaps = 6/118 (5%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +L LM+H WVFN PVD KL+IPDYF++I PMDLGTVK+++ YS F
Sbjct: 210 QCETLLSRLMLHQYAWVFNNPVDVEKLNIPDYFTVIKHPMDLGTVKSKITTGAYSSPLAF 269
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV------PKAGL 221
ADVRLTFSNAM YNPP N+VH MA+ L+ F+++WK++E+K + P+AG+
Sbjct: 270 AADVRLTFSNAMKYNPPGNDVHFMAETLSKYFEVRWKAIEKKLPVTIGAEPVAPRAGI 327
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 106/168 (63%), Gaps = 28/168 (16%)
Query: 418 DVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKAR 477
D Q+SP K RAA+L++RFADTILKA+++ L + G+K DP KL++E+E LE++Q+EEKAR
Sbjct: 578 DRQVSPDKLYRAAILRNRFADTILKAREKAL-EKGEKRDPEKLRKEREELERQQKEEKAR 636
Query: 478 IEAQIKAAEAASRMKAEIELKKQ---REKEREAARVALQKMERTVEIEHNLEILKELEML 534
++A+ KAAE A R A + RE EREAAR ALQ+ME+TVEI N + +++LEML
Sbjct: 637 LQAEAKAAEEAQRKAAAEAAAEAKRQRELEREAARQALQQMEKTVEINENSQFMEDLEML 696
Query: 535 SGCC----------LSPHL-LNGSEAQKRAFKEAHFKNPLERIGLFMK 571
SP L GS NPLE++GL+MK
Sbjct: 697 RTAHDEELPSFMEETSPEFVLQGS-------------NPLEQLGLYMK 731
>gi|356513665|ref|XP_003525531.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 739
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 116/165 (70%), Gaps = 13/165 (7%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
Q+SP K RAA+L+SRFADTILKAQ++TL + GDK DP KL+ E++ LE+RQ+EEKAR++
Sbjct: 552 QVSPDKLYRAALLRSRFADTILKAQEKTL-EKGDKWDPEKLRMERKELERRQKEEKARLQ 610
Query: 480 AQIKAAEAASR---MKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSG 536
A+ KAAE R +A E K++RE EREAAR ALQKME+T+ I + + L++LEMLSG
Sbjct: 611 AEAKAAEEVRRKAEAEAATEAKRKRELEREAARQALQKMEKTIGISESSQFLEDLEMLSG 670
Query: 537 CCLSPHLLNGSEAQK--------RAFKEAHFKNPLERIGLFMKSD 573
L HL N +E + +FK NPLE++GL+MK+D
Sbjct: 671 -LLDEHLPNFTEERSPDHLENGLGSFKLQGSCNPLEQLGLYMKAD 714
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 73/100 (73%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK +M H G VF++PVD VK +IPDYF+II PMDLGTVK++L Y+ +F
Sbjct: 173 QCETLLKRVMSHQFGKVFDKPVDIVKWNIPDYFTIIKHPMDLGTVKSKLISCEYTSLMDF 232
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
ADVRLTFSNAM YNPP N+VH MA+ L+ F+ +WK +E
Sbjct: 233 AADVRLTFSNAMSYNPPGNDVHVMAETLSKYFETRWKPIE 272
>gi|224060209|ref|XP_002300086.1| global transcription factor group [Populus trichocarpa]
gi|222847344|gb|EEE84891.1| global transcription factor group [Populus trichocarpa]
Length = 630
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 85/116 (73%), Gaps = 5/116 (4%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK LM H GWVFN PVD VKL+IPDY+++I PMDLGT+K+++ YS EF
Sbjct: 118 QCETLLKRLMSHQYGWVFNSPVDIVKLNIPDYYTVIKNPMDLGTIKSKISSGAYSSPLEF 177
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKIL 225
+ADVRLTF NAM+YNP ++ + MA LN F+++WK++E+K +P+AG G++L
Sbjct: 178 MADVRLTFKNAMVYNPQGSDAYIMADTLNKFFEMRWKAIEKK----LPRAG-GEVL 228
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 116/188 (61%), Gaps = 11/188 (5%)
Query: 418 DVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKAR 477
D Q+S +K +R A++K+RFADTILKA++++ L GDK DP KLQ+E+E LE +++EKAR
Sbjct: 443 DSQVSLEKRIRHALIKNRFADTILKAKEKS-LSQGDKGDPQKLQREREELELHKKKEKAR 501
Query: 478 I---EAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEML 534
+ + A+ + A E +++RE EREAAR AL KME+TVEI N + L++LEML
Sbjct: 502 LLAEAQAAEDAQRQAEAAAAAEARRKRELEREAARQALLKMEKTVEINENSQFLEDLEML 561
Query: 535 SGCCLSPHLLNGSEAQKRAFKE--AHFK----NPLERIGLFMKSDYLVEDEDE-EILNLD 587
++ E ++ FK NPLE++GLFMK D E+ + +LN
Sbjct: 562 RVVPAEHVPISVDETSPDPSQDGLGGFKFGACNPLEQLGLFMKDDEEEEEGEPLNVLNPL 621
Query: 588 GDGEEGEI 595
+ EEGEI
Sbjct: 622 NEVEEGEI 629
>gi|17064912|gb|AAL32610.1| Unknown protein [Arabidopsis thaliana]
gi|20259928|gb|AAM13311.1| unknown protein [Arabidopsis thaliana]
Length = 503
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 111/201 (55%), Gaps = 19/201 (9%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +L+ L HP WVF PVD VKL+IPDY + I PMDLGTVK L +YS EF
Sbjct: 179 QCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEF 238
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
ADVRLTF++AM YNPP ++VH M L+ LF+ +WK++++K +P + + L
Sbjct: 239 AADVRLTFTDAMTYNPPGHDVHIMGDILSKLFEARWKTIKKK----LPPCSM-QTLPAVT 293
Query: 230 MEVNDTRQNCPKTPPLHSTLSSKKSKMSE--EKAARSSYCARAVEVERAKPAQNLSSKL- 286
+E ND R+ PP +KK KM+ ++ EVER + + L S L
Sbjct: 294 LEPNDERKAAISVPP------AKKRKMASPVRESVPEPVKPLMTEVERHRLGRQLESLLD 347
Query: 287 -----VIKNLHKGTNDGGRLA 302
+I L K ++GG +A
Sbjct: 348 ELPAHIIDFLKKHNSNGGEIA 368
>gi|224121914|ref|XP_002318704.1| global transcription factor group [Populus trichocarpa]
gi|222859377|gb|EEE96924.1| global transcription factor group [Populus trichocarpa]
Length = 613
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 78/111 (70%), Gaps = 5/111 (4%)
Query: 106 GVTH-----QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
G+T+ QC +L LM H GW+FN PVD VK++IPDYF+II PMDLGTVK+R+
Sbjct: 88 GITNAMLMKQCETLLNRLMTHQFGWIFNTPVDVVKMNIPDYFTIIKHPMDLGTVKSRIIS 147
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
YS F ADVRLTF+NAM YNPP N+ H MA+ L+ F+++WK +E+K
Sbjct: 148 GEYSSPLGFAADVRLTFANAMKYNPPGNDFHFMAETLSKFFEVRWKVIEKK 198
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 125/209 (59%), Gaps = 15/209 (7%)
Query: 401 PPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKL 460
P A ++ +E + + Q+SP+K RAA+L++RFADTILKA+++ L + G+K DP KL
Sbjct: 405 PVAAEADGHQEGESAPPERQVSPEKLYRAALLRNRFADTILKAREKAL-EKGEKRDPEKL 463
Query: 461 QQEKERLEQRQREEKARIE---AQIKAAEAASRMKAEIELKKQREKEREAARVALQKMER 517
++EKE E+RQ+EEKAR++ + A + +A E K+QRE EREAAR AL +ME+
Sbjct: 464 RKEKEEFERRQKEEKARLQAEAKAAEEARRKAEAEAAAEAKRQRELEREAARQALIQMEK 523
Query: 518 TVEIEHNLEILKELEMLSGCCLS---PHLLNGSEAQKRAFKEAHFK----NPLERIGLFM 570
TV+I N + +++LEML P + + FK NPLE++GL+M
Sbjct: 524 TVDINENCQFMEDLEMLRIAHHDEQLPSFIEETSPDHSQNGLGSFKLQGSNPLEQLGLYM 583
Query: 571 KSDYLVEDEDEE----ILNLDGDGEEGEI 595
K D E+E E + +L D EEGEI
Sbjct: 584 KEDDEDEEEVVEPPSSVPDLTKDVEEGEI 612
>gi|224136059|ref|XP_002322229.1| global transcription factor group [Populus trichocarpa]
gi|222869225|gb|EEF06356.1| global transcription factor group [Populus trichocarpa]
Length = 709
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 95/182 (52%), Gaps = 16/182 (8%)
Query: 31 CEYGQQQSHVENWRHSSSVAESNQLMMSKPYRSSGGKKMIASEHSKERSSILPFNKRQAQ 90
C GQ++ +E S V+ + P R+ G K S S+ P A
Sbjct: 105 CSDGQKRPPLEGLHSSFEVSAPQSKKRAPPDRNRGHTKKGTSARSEPVKPAAPLGISTAM 164
Query: 91 EVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMD 150
+ QC +L LM H GW+F PVD VKL+IPDYF+II PMD
Sbjct: 165 ----------------LMKQCEALLNRLMAHQFGWIFKTPVDVVKLNIPDYFTIIKHPMD 208
Query: 151 LGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
LGTVK+++ YS F ADVRLTFSNAM YNPP N+VH MA+ L F+++WK +E+
Sbjct: 209 LGTVKSKIVSGEYSSPLGFAADVRLTFSNAMKYNPPGNDVHSMAETLRKYFEVRWKVIEK 268
Query: 211 KW 212
K
Sbjct: 269 KL 270
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 124/213 (58%), Gaps = 23/213 (10%)
Query: 376 KSDPD----SDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAM 431
+SDPD + +V LD L ++ P A + +E + Q+SP+K RAA+
Sbjct: 484 RSDPDDSDVGNQSVDGLDQVEL--DTEGKPVAAEVDGHQEGESAPSKRQVSPEKLYRAAL 541
Query: 432 LKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRM 491
L++RFADTILKA+++ L + G+K DP KL++EKE E+RQ+EEKAR++A+ KAAE A R
Sbjct: 542 LRNRFADTILKAREKAL-EKGEKCDPEKLRKEKEEFERRQKEEKARLQAEAKAAEEARRK 600
Query: 492 KAEIELKKQREK---EREAARVALQKMERTVEIEHNLEILKELEMLSGCC---------- 538
+ + K EREAAR AL +ME+TV+I N +++LEML
Sbjct: 601 AEAEAAAEAKRKRELEREAARQALLEMEKTVDINENSHFMEDLEMLRTVHDEQLPSFIEE 660
Query: 539 LSPHLLNGSEAQKRAFKEAHFKNPLERIGLFMK 571
SP L S+ +FK NPLE++GL+MK
Sbjct: 661 TSPDL---SQNCLGSFKLQGSSNPLEQLGLYMK 690
>gi|356508786|ref|XP_003523135.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 781
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 72/101 (71%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C +L LM H GWVFN PVD VKL+IPDYF++I PMDLGTVK R+ YS +F
Sbjct: 211 CENVLNRLMSHQFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGEYSNPMDFA 270
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
ADVRLTF NAM YNP N+VH MA+ L+ F+ +WK++E+K
Sbjct: 271 ADVRLTFENAMFYNPAGNDVHIMAETLSKFFETRWKAIEKK 311
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 124/211 (58%), Gaps = 11/211 (5%)
Query: 371 TSQMSKSDPDSD--GAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALR 428
TS +K DP + G S G + SSQ AT+ S ++ + Q+SP+K R
Sbjct: 543 TSDQNKGDPGNSETGKDSTNVGGQVEQSSQSGHVATEPESHQDGESAASKRQVSPEKLYR 602
Query: 429 AAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAA 488
AA+L+SRFADTILKAQ++ L + +K DP KL+ E+E LE+RQ+EEKAR++A+ KAAE A
Sbjct: 603 AALLRSRFADTILKAQEKAL-EKDEKRDPEKLRIEREDLERRQKEEKARLQAEAKAAEEA 661
Query: 489 SRMKAEIELKKQREK---EREAARVALQKMERTVEIEHNLEILKELEMLSGCCLS--PHL 543
R + + K EREAAR ALQKME+TV+I N L++LEMLS P
Sbjct: 662 QRKAEAEAAAEAKRKRELEREAARQALQKMEKTVDINENSHFLEDLEMLSAVHDEHLPSF 721
Query: 544 LNGSEAQKRAFKEAHFK---NPLERIGLFMK 571
+ A + K NPLE++GL+MK
Sbjct: 722 KEETSADQPQDGLGGIKLQGNPLEQLGLYMK 752
>gi|326487788|dbj|BAK05566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 76/115 (66%)
Query: 98 DKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTR 157
+K M+ T C IL LM HP GW+F++ VDP IPDYF +I PMDLGTVK +
Sbjct: 71 NKAGSMNASKTRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKK 130
Query: 158 LDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
L Y +D+F ADVRLTFSNAM YNPP VH +A++LN +F+++W S E KW
Sbjct: 131 LTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSYERKW 185
>gi|297734375|emb|CBI15622.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 81/129 (62%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +L LM H GW+FN PVD V+L IPDYF++I PMDLGT+K+++ Y +F
Sbjct: 163 QCETLLSRLMTHQFGWIFNNPVDVVELKIPDYFTVIKHPMDLGTIKSKMASGEYLSPFDF 222
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
ADVRLTFSNAM YNP N+VH MA+ LN F+++WK +E+K P K+ K
Sbjct: 223 AADVRLTFSNAMTYNPRGNDVHFMAETLNKFFEMRWKPIEKKLPKVAPTDHKIKMEPNKR 282
Query: 230 MEVNDTRQN 238
+ + R N
Sbjct: 283 IMTKEERHN 291
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 119/202 (58%), Gaps = 34/202 (16%)
Query: 392 NLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDH 451
N+ P+ + P + ++ +E + + Q+SP+K RAA+L+SRFADTILKA+++TL +
Sbjct: 488 NVDPNLESKPISAEADGHQEGESAPSERQVSPEKLYRAALLRSRFADTILKAREKTL-EK 546
Query: 452 GDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREK---EREAA 508
G+K DP KL+ E+E LE+RQ+EEKAR++A+ KAAE A + + + K +REAA
Sbjct: 547 GEKGDPEKLRLEREELERRQKEEKARLQAEAKAAEEARKKAEAEAAAEAKRKRELDREAA 606
Query: 509 RVALQKMERTVEIEHNLEILKELEML-----------------SGCCLSPHLLNGSEAQK 551
R ALQ+M++TV+I N LK+LEML S CL L GS
Sbjct: 607 RQALQQMQKTVDINENCLFLKDLEMLRAAPEPLPSLDERSPDQSPNCLGSFKLQGS---- 662
Query: 552 RAFKEAHFKNPLERIGLFMKSD 573
NPLE++GL+MK D
Sbjct: 663 ---------NPLEQLGLYMKMD 675
>gi|18395937|ref|NP_566151.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
gi|75163747|sp|Q93ZB7.1|GTE11_ARATH RecName: Full=Transcription factor GTE11; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 10; Short=AtBET10;
AltName: Full=Bromodomain-containing protein GTE11;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E11
gi|16323117|gb|AAL15293.1| AT3g01770/F28J7_10 [Arabidopsis thaliana]
gi|20466526|gb|AAM20580.1| unknown protein [Arabidopsis thaliana]
gi|22136456|gb|AAM91306.1| unknown protein [Arabidopsis thaliana]
gi|332640191|gb|AEE73712.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
Length = 620
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 75/104 (72%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK LM W+FN PVD VKL+IPDYF+II PMDLGTVK++L YS EF
Sbjct: 132 QCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEF 191
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
ADVRLTF NAM YNP +NNV++ A L+ F+++WK++E+K S
Sbjct: 192 SADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTIEKKSS 235
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 117/184 (63%), Gaps = 13/184 (7%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
++ P+K RAA+LK+RFAD ILKAQ+ TL + +K DP LQ+EKE LE ++++EKAR++
Sbjct: 441 ELPPEKRYRAALLKNRFADIILKAQEITL-NQNEKRDPETLQREKEELELQKKKEKARLQ 499
Query: 480 AQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCCL 539
A+ K AE A R E K++ E EREAAR AL +ME++VEI N LK+LE+L
Sbjct: 500 AEAKEAEEARRKAEAQEAKRKLELEREAARQALLEMEKSVEINENTRFLKDLELLKTVN- 558
Query: 540 SPHLLN----GSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDE-EILNLDGDG---E 591
+ L N GSE+ A NPLE++GLFMK + EDEDE ++L G E
Sbjct: 559 TDQLRNLRDVGSESDGLAVFGFGGSNPLEQLGLFMKHE---EDEDESDMLAFPDPGNEVE 615
Query: 592 EGEI 595
EGEI
Sbjct: 616 EGEI 619
>gi|6016737|gb|AAF01563.1|AC009325_33 hypothetical protein [Arabidopsis thaliana]
gi|6091741|gb|AAF03453.1|AC010797_29 hypothetical protein [Arabidopsis thaliana]
Length = 601
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 75/104 (72%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK LM W+FN PVD VKL+IPDYF+II PMDLGTVK++L YS EF
Sbjct: 132 QCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEF 191
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
ADVRLTF NAM YNP +NNV++ A L+ F+++WK++E+K S
Sbjct: 192 SADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTIEKKSS 235
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 117/184 (63%), Gaps = 13/184 (7%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
++ P+K RAA+LK+RFAD ILKAQ+ TL + +K DP LQ+EKE LE ++++EKAR++
Sbjct: 422 ELPPEKRYRAALLKNRFADIILKAQEITL-NQNEKRDPETLQREKEELELQKKKEKARLQ 480
Query: 480 AQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCCL 539
A+ K AE A R E K++ E EREAAR AL +ME++VEI N LK+LE+L
Sbjct: 481 AEAKEAEEARRKAEAQEAKRKLELEREAARQALLEMEKSVEINENTRFLKDLELLKTVN- 539
Query: 540 SPHLLN----GSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDE-EILNLDGDG---E 591
+ L N GSE+ A NPLE++GLFMK + EDEDE ++L G E
Sbjct: 540 TDQLRNLRDVGSESDGLAVFGFGGSNPLEQLGLFMKHE---EDEDESDMLAFPDPGNEVE 596
Query: 592 EGEI 595
EGEI
Sbjct: 597 EGEI 600
>gi|356516581|ref|XP_003526972.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 786
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 94/164 (57%), Gaps = 16/164 (9%)
Query: 63 SSGGKK-MIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDR--------------GV 107
S+G K+ + S+HS S+ P KR GPK K+ +R +
Sbjct: 151 SAGQKRPKLESQHSTMEVSVPPGKKRPVPGH-NGPKSKKSMSERLEHAKPAAPVTSYAML 209
Query: 108 THQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +L LM H WVFN PVD VKL+IPDYF++I PMDLGTVK R+ YS
Sbjct: 210 MKSCENVLNRLMSHQFAWVFNDPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGEYSNPM 269
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
+F ADVRLTF NAM YNP N+VH MA+ L+ F+ +WK++E+K
Sbjct: 270 DFAADVRLTFDNAMFYNPAGNDVHIMAETLSKFFETRWKAIEKK 313
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 13/212 (6%)
Query: 371 TSQMSKSDPDSD--GAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALR 428
TS +K DP + G S G + SSQ P AT+ S +E + Q+SP+K R
Sbjct: 545 TSDQNKGDPGNSETGKDSTNVGGQVEESSQSRPVATEPESHQEGESAASKRQVSPEKLYR 604
Query: 429 AAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAA 488
AA+L+SRFADTILKAQ++ L + +K DP KL+ E+E LE+RQ+EEKAR++A+ KAAE A
Sbjct: 605 AALLRSRFADTILKAQEKAL-EKDEKRDPEKLRIEREDLERRQKEEKARLQAEAKAAEEA 663
Query: 489 SRMKAEIELKKQREK---EREAARVALQKMERTVEIEHNLEILKELEMLSGCCLSPHLLN 545
R + + K EREAAR ALQKME+TV+I N + L++LEMLS HL +
Sbjct: 664 QRKAEAEAAAEAKRKRELEREAARQALQKMEKTVDINENSQFLEDLEMLSAVH-DEHLPS 722
Query: 546 GSEAQKRAFKEAHF------KNPLERIGLFMK 571
E + NPLE++GL+MK
Sbjct: 723 FKEETSTDQPQDGLGGIKLQGNPLEQLGLYMK 754
>gi|356574042|ref|XP_003555161.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 741
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 74/101 (73%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C ++LK LM H WVFN PVD VKL++PDYF+II +PMDLGTVK +L Y+ EF
Sbjct: 181 CELLLKRLMNHQYAWVFNTPVDVVKLNLPDYFTIIKRPMDLGTVKNKLASGEYAGPLEFA 240
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
DV+LTFSNAM YNP N+VH MA LN F+++WK++E+K
Sbjct: 241 DDVKLTFSNAMDYNPSGNDVHLMADTLNKYFELRWKAIEKK 281
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 131/222 (59%), Gaps = 13/222 (5%)
Query: 384 AVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKA 443
+VS LD L +SQ P + DS ++ + + Q SP K RAA+LK RF DTILKA
Sbjct: 522 SVSGLD--QLDDNSQHKPSSFDSDCQQDGDSAATERQFSPDKLYRAAVLKKRFLDTILKA 579
Query: 444 QQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREK 503
+++TL G+K DP KL+QE+E+LE Q++EKAR++A+ KAAE A + E + R K
Sbjct: 580 REKTLT-QGEKGDPEKLRQEREKLEMEQKKEKARLQAEAKAAEDARKQAEEEAAAEARRK 638
Query: 504 ---EREAARVALQKMERTVEIEHNLEILKELEMLSGCCLS--PHLLNGSEAQKRAFKEAH 558
EREAAR AL +ME+TVEI N IL++LE+L P ++ +
Sbjct: 639 RELEREAARQALLQMEKTVEINENSRILEDLELLRAVPTEQLPSSVDETSPAHSQDGLGS 698
Query: 559 FK----NPLERIGLFMKSDYLVEDEDEE-ILNLDGDGEEGEI 595
FK NPLE++GL++K+D E+ + I N D EEGEI
Sbjct: 699 FKFGSSNPLEQLGLYIKADDEEEEGEPPCIPNPVNDVEEGEI 740
>gi|255536997|ref|XP_002509565.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223549464|gb|EEF50952.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 718
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 75/105 (71%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V QC +L LM H GWVF PVD VKL+IPDY++II PMDLGT+K+ + LYS
Sbjct: 105 VMKQCETLLSRLMSHQYGWVFKEPVDVVKLNIPDYYTIIKHPMDLGTIKSNICSGLYSSP 164
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF+ADVRLTF NAM YNP ++VH MA L+ F+++WK++E+K
Sbjct: 165 LEFLADVRLTFRNAMEYNPKGSDVHIMADTLSKFFEVRWKAIEKK 209
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 137/229 (59%), Gaps = 18/229 (7%)
Query: 378 DPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFA 437
DP+S VS LD L +SQ P + +S ++ + + Q+SP K RAAMLK+RFA
Sbjct: 496 DPES---VSGLD--QLEQTSQQKPSSVESDCCQDGDSAPNERQVSPDKLFRAAMLKNRFA 550
Query: 438 DTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIEL 497
+TILKA+++TL DK DP KL++EK LE ++++EKAR++A+ KAAE A +
Sbjct: 551 ETILKAREKTL-SQVDKGDPEKLRREKVELELQKKKEKARLQAEAKAAEDARKQAEAAAA 609
Query: 498 KKQREK---EREAARVALQKMERTVEIEHNLEILKELEMLSGCCLSPHLLNGSEAQKRAF 554
+ R K EREAAR AL KME+TVEI N ++L++LEML + HL + +
Sbjct: 610 AEARRKRELEREAARQALLKMEKTVEINENSQLLEDLEMLRAAPVE-HLPSSVDETSPVH 668
Query: 555 KE---AHFK----NPLERIGLFMKSDYLVEDEDE-EILNLDGDGEEGEI 595
+ FK NPLE++GLFMK D E+ + ILN D EEGEI
Sbjct: 669 SQDGLGGFKFGGSNPLEQLGLFMKQDEEEEEGEPLNILNPVNDMEEGEI 717
>gi|359491054|ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE10-like
[Vitis vinifera]
Length = 770
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 73/102 (71%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +L LM H GW+FN PVD V+L IPDYF++I PMDLGT+K+++ Y +F
Sbjct: 214 QCETLLSRLMTHQFGWIFNNPVDVVELKIPDYFTVIKHPMDLGTIKSKMASGEYLSPFDF 273
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
ADVRLTFSNAM YNP N+VH MA+ LN F+++WK +E+K
Sbjct: 274 AADVRLTFSNAMTYNPRGNDVHFMAETLNKFFEMRWKPIEKK 315
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 129/226 (57%), Gaps = 36/226 (15%)
Query: 392 NLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDH 451
N+ P+ + P + ++ +E + + Q+SP+K RAA+L+SRFADTILKA+++TL +
Sbjct: 558 NVDPNLESKPISAEADGHQEGESAPSERQVSPEKLYRAALLRSRFADTILKAREKTL-EK 616
Query: 452 GDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREK---EREAA 508
G+K DP KL+ E+E LE+RQ+EEKAR++A+ KAAE A + + + K +REAA
Sbjct: 617 GEKGDPEKLRLEREELERRQKEEKARLQAEAKAAEEARKKAEAEAAAEAKRKRELDREAA 676
Query: 509 RVALQKMERTVEIEHNLEILKELEML-----------------SGCCLSPHLLNGSEAQK 551
R ALQ+M++TV+I N LK+LEML S CL L GS
Sbjct: 677 RQALQQMQKTVDINENCLFLKDLEMLRAAPEPLPSLDERSPDQSPNCLGSFKLQGS---- 732
Query: 552 RAFKEAHFKNPLERIGLFMKSD--YLVEDEDEEILNLDGDGEEGEI 595
NPLE++GL+MK D E E + I D EEGEI
Sbjct: 733 ---------NPLEQLGLYMKMDDEEEEEVEPQCIPGPGNDVEEGEI 769
>gi|115447147|ref|NP_001047353.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|47497295|dbj|BAD19337.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848299|dbj|BAD22163.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|113536884|dbj|BAF09267.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|222623188|gb|EEE57320.1| hypothetical protein OsJ_07416 [Oryza sativa Japonica Group]
Length = 714
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 86/140 (61%), Gaps = 9/140 (6%)
Query: 106 GVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
+ QC ILK LM +F+ PVD VKL+IPDYF II KPMDLGT++ +LD Y+
Sbjct: 166 AIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTS 225
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKIL 225
EF ADVRLTFSNAM YNP + VH A +LN +F+ +W+++E+K +S I
Sbjct: 226 PSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTIEKKLAS---------IA 276
Query: 226 SGKMMEVNDTRQNCPKTPPL 245
+ +EV+ KTPP+
Sbjct: 277 TEAHVEVDRADSKRRKTPPV 296
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 111/185 (60%), Gaps = 19/185 (10%)
Query: 418 DVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKAR 477
D Q+SP K LRAA+L+SR+AD I+KAQ L GDK E LE+ Q+EEKAR
Sbjct: 541 DRQVSPDKLLRAALLRSRYADVIVKAQG-ILSQGGDKQ---------EELEKLQKEEKAR 590
Query: 478 IEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGC 537
+ A+ AA A R +AE E K++R+ ERE AR ALQ+MERTVEI NL LK+LEML G
Sbjct: 591 LLAEGNAAMEARRAEAEAEAKRKRDLEREKARQALQEMERTVEINDNLH-LKDLEML-GT 648
Query: 538 CLSPHLLNGSEAQKRAFKEAHFK-------NPLERIGLFMKSDYLVEDEDEEILNLDGDG 590
+ H+++ + + NPLE++GLFMK+D E+ED + D
Sbjct: 649 ATTEHIVSSVDETSPEHSQDGMPSFLPGSGNPLEQLGLFMKADEEEEEEDPSSVPSTKDA 708
Query: 591 EEGEI 595
EEGEI
Sbjct: 709 EEGEI 713
>gi|218191119|gb|EEC73546.1| hypothetical protein OsI_07959 [Oryza sativa Indica Group]
Length = 714
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 86/140 (61%), Gaps = 9/140 (6%)
Query: 106 GVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
+ QC ILK LM +F+ PVD VKL+IPDYF II KPMDLGT++ +LD Y+
Sbjct: 166 AIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTS 225
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKIL 225
EF ADVRLTFSNAM YNP + VH A +LN +F+ +W+++E+K +S I
Sbjct: 226 PSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTIEKKLAS---------IA 276
Query: 226 SGKMMEVNDTRQNCPKTPPL 245
+ +EV+ KTPP+
Sbjct: 277 TEAHVEVDRADSKRRKTPPV 296
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 111/185 (60%), Gaps = 19/185 (10%)
Query: 418 DVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKAR 477
D Q+SP K LRAA+L+SR+AD I+KAQ L GDK E LE+ Q+EEKAR
Sbjct: 541 DRQVSPDKLLRAALLRSRYADVIVKAQG-ILSQGGDKQ---------EELEKLQKEEKAR 590
Query: 478 IEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGC 537
+ A+ AA A R +AE E K++R+ ERE AR ALQ+MERTVEI NL LK+LEML G
Sbjct: 591 LLAEGNAAMEARRAEAEAEAKRKRDLEREKARQALQEMERTVEINDNLH-LKDLEML-GT 648
Query: 538 CLSPHLLNGSEAQKRAFKEAHFK-------NPLERIGLFMKSDYLVEDEDEEILNLDGDG 590
+ H+++ + + NPLE++GLFMK+D E+ED + D
Sbjct: 649 ATTEHIVSSVDETSPEHSQDGMPSFLPGSGNPLEQLGLFMKADEEEEEEDPSSVPSTKDA 708
Query: 591 EEGEI 595
EEGEI
Sbjct: 709 EEGEI 713
>gi|13699186|dbj|BAB41205.1| kinase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 714
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 86/140 (61%), Gaps = 9/140 (6%)
Query: 106 GVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
+ QC ILK LM +F+ PVD VKL+IPDYF II KPMDLGT++ +LD Y+
Sbjct: 166 AIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTS 225
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKIL 225
EF ADVRLTFSNAM YNP + VH A +LN +F+ +W+++E+K +S I
Sbjct: 226 PSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTIEKKLAS---------IA 276
Query: 226 SGKMMEVNDTRQNCPKTPPL 245
+ +EV+ KTPP+
Sbjct: 277 TEAHVEVDRADSKRRKTPPV 296
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 109/185 (58%), Gaps = 19/185 (10%)
Query: 418 DVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKAR 477
D Q+SP K LR A L+SR+AD I+KAQ L GDK E LE+ Q+EEKAR
Sbjct: 541 DRQVSPDKLLRTAFLRSRYADVIVKAQG-ILSQGGDKQ---------EELEKLQKEEKAR 590
Query: 478 IEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGC 537
+ A+ AA A R +AE E K++R+ ERE AR ALQ+MERTVEI NL LK+LEML G
Sbjct: 591 LLAEGNAAMEARRAEAEAEAKRKRDLEREKARQALQEMERTVEINDNLH-LKDLEML-GT 648
Query: 538 CLSPHLLNGSEAQKRAFKEAHFK-------NPLERIGLFMKSDYLVEDEDEEILNLDGDG 590
+ H+++ + + NPLE++GLFMK+D E+ED + D
Sbjct: 649 ATTEHIVSSVDETSPEHSQDGMPSFLPGSGNPLEQLGLFMKADEEEEEEDPSCVPSTKDA 708
Query: 591 EEGEI 595
EEGEI
Sbjct: 709 EEGEI 713
>gi|297828570|ref|XP_002882167.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
gi|297328007|gb|EFH58426.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 73/104 (70%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK LM W+FN PVD VKL+IPDYF+II PMDLGTVK++L YS EF
Sbjct: 129 QCETLLKRLMSQQHCWLFNTPVDMVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEF 188
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
ADVRLTF NAM YNP +NNV++ A L+ F+++WK+ +K S
Sbjct: 189 SADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTFNKKSS 232
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 115/191 (60%), Gaps = 20/191 (10%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
Q+ P+K RAA+LK RFAD ILKA++ TL + +K DP KL++EKE +E ++++EKAR++
Sbjct: 436 QLPPEKRYRAALLKDRFADIILKAKEITL-NQNEKRDPEKLRREKEEIELQKKKEKARLQ 494
Query: 480 AQIKAAEAASRMKAEIEL-------KKQREKEREAARVALQKMERTVEIEHNLEILKELE 532
A+ K AE A R K++ E ER+AAR AL +ME++VEI N LK+LE
Sbjct: 495 AEAKEAEEARRKAEAQAAVEAAAEAKRKLELERKAARQALLEMEKSVEINENTRFLKDLE 554
Query: 533 MLSGCCLSPHLLN----GSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDE-EILNLD 587
+L + L N GS++ NPLE++GLFMK D EDEDE ++L
Sbjct: 555 LLK-TVKTDQLRNLRDVGSDSDGLEVFGFGGSNPLEQLGLFMKHD---EDEDEADLLAFP 610
Query: 588 GDG---EEGEI 595
G EEGEI
Sbjct: 611 DPGNEVEEGEI 621
>gi|356560521|ref|XP_003548540.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 740
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 74/101 (73%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C ++LK LM H GWVF PVD VKL +PDYFSII PMDLGTVK+++ Y+ EF
Sbjct: 181 CELLLKRLMSHQYGWVFKTPVDVVKLKLPDYFSIIKHPMDLGTVKSKIAAGEYAGPIEFA 240
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
DVRLTFSNAM+YNP N+VH MA L+ F+++WK++E+K
Sbjct: 241 DDVRLTFSNAMIYNPRGNDVHVMADTLSKYFELRWKAIEKK 281
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 10/161 (6%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
++SP K RAA+LK+RFADTILKA+++TL G+K DP KL+Q++E+LE +++E+AR++
Sbjct: 554 KVSPDKLYRAALLKNRFADTILKAREKTLT-KGEKGDPEKLRQQREKLEIERQKERARLQ 612
Query: 480 AQIKAAEAASRMKAEIELKKQREK---EREAARVALQKMERTVEIEHNLEILKELEMLSG 536
A+ KAAE A + + R K EREAAR L +ME++VEI N + L++ E+LS
Sbjct: 613 AEAKAAEDARKRADAEAAAEARRKRELEREAARQVLLQMEKSVEINENSQFLEDFELLSA 672
Query: 537 CCLS--PHLLNGSEAQKRAFKEAHFK----NPLERIGLFMK 571
P ++ + FK NPLE++GL++K
Sbjct: 673 VPAEQLPSSVDETSPDISQDGMGSFKFGGGNPLEQLGLYIK 713
>gi|356545057|ref|XP_003540962.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 874
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 75/106 (70%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS +L+ LM H GWVFN PVD L + DYF+II+ PMDLGTVK+RL++N Y EF
Sbjct: 535 CSSLLEKLMKHKHGWVFNAPVDVEALGLHDYFTIITHPMDLGTVKSRLNKNWYKSPKEFA 594
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
DVRLTF NAM YNPP +VH MA++L+ +F+ +W +E ++ E+
Sbjct: 595 EDVRLTFRNAMTYNPPGQDVHIMAEQLSKIFEDRWAIIESDYNREM 640
>gi|47497296|dbj|BAD19338.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848300|dbj|BAD22164.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|215768414|dbj|BAH00643.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 480
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 86/140 (61%), Gaps = 9/140 (6%)
Query: 106 GVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
+ QC ILK LM +F+ PVD VKL+IPDYF II KPMDLGT++ +LD Y+
Sbjct: 166 AIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTS 225
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKIL 225
EF ADVRLTFSNAM YNP + VH A +LN +F+ +W+++E+K +S I
Sbjct: 226 PSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTIEKKLAS---------IA 276
Query: 226 SGKMMEVNDTRQNCPKTPPL 245
+ +EV+ KTPP+
Sbjct: 277 TEAHVEVDRADSKRRKTPPV 296
>gi|356560519|ref|XP_003548539.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 744
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 74/101 (73%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C ++LK LM H WVF PVD VKL++PDYF+II +PMDLGTVK++L Y+ EF
Sbjct: 184 CELLLKRLMSHQYAWVFKTPVDVVKLNLPDYFTIIKRPMDLGTVKSKLAAGEYAGPLEFA 243
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
DV+LTFSNAM YNP N+VH MA LN F+++WK++E+K
Sbjct: 244 DDVKLTFSNAMNYNPSGNDVHLMADTLNKYFELRWKAIEKK 284
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 132/222 (59%), Gaps = 13/222 (5%)
Query: 384 AVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKA 443
+VS LD L +SQ P + DS ++ + + Q+SP K RAA+LK RF DTILKA
Sbjct: 525 SVSGLD--QLEDNSQHKPSSFDSDCQQDGDSAPTERQVSPDKLYRAAVLKKRFLDTILKA 582
Query: 444 QQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREK 503
+++TL G+K DP KL+QE+E+LE Q++EKAR++A+ KAAE A + E + R K
Sbjct: 583 REKTLT-QGEKGDPEKLRQEREKLEMEQKKEKARLQAEAKAAEDARKRAEEEAAAEARRK 641
Query: 504 ---EREAARVALQKMERTVEIEHNLEILKELEMLSGCCLS--PHLLNGSEAQKRAFKEAH 558
EREAAR AL +ME+TVEI N IL++LEML P ++ +
Sbjct: 642 RELEREAARQALLQMEKTVEINENSRILEDLEMLRAVPAEQLPSSVDETSPAHSQDGLGS 701
Query: 559 FK----NPLERIGLFMKSDYLVEDEDEE-ILNLDGDGEEGEI 595
FK NPLE++GL++K+D E+ + I N D EEGEI
Sbjct: 702 FKFGSSNPLEQLGLYIKADDEEEEGEPPCIPNPVNDVEEGEI 743
>gi|449439059|ref|XP_004137305.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449483310|ref|XP_004156552.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 538
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 82/128 (64%), Gaps = 12/128 (9%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V CS +L+ LM H GWVFN PVD +L + DY II+KPMDLGT+K RL++N Y
Sbjct: 231 VLKSCSNLLERLMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRLNKNWYKSP 290
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILS 226
EF DVRLTFSNA+ YNP +VH MA++L+N+F+ KWK++E GK
Sbjct: 291 REFAEDVRLTFSNAITYNPKGEDVHMMAEQLSNIFEEKWKTIE------------GKQNV 338
Query: 227 GKMMEVND 234
GK +V+D
Sbjct: 339 GKGFQVDD 346
>gi|240256475|ref|NP_201137.5| nuclear protein X1 [Arabidopsis thaliana]
gi|327488242|sp|Q9FGW9.2|GTE10_ARATH RecName: Full=Transcription factor GTE10; AltName:
Full=Bromodomain-containing protein GTE10; AltName:
Full=Nuclear protein X1; AltName: Full=Protein GLOBAL
TRANSCRIPTION FACTOR GROUP E10
gi|332010349|gb|AED97732.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 1061
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 73/105 (69%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V +C +L L H +GW F PVDPV L+IPDYF++I PMDLGT+++RL + YS
Sbjct: 161 VMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSP 220
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
+F ADVRLTFSN++ YNPP N H MAQ ++ F+ WKS+E+K
Sbjct: 221 LDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKK 265
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 99/193 (51%), Gaps = 27/193 (13%)
Query: 393 LCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHG 452
L P + PP E +P SP K RAA LK+RFADTI+KA+++ G
Sbjct: 537 LVPDEETAPP-------ERQISP-----DSPDKRYRAAFLKNRFADTIMKAREKAFT-KG 583
Query: 453 DKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREKEREAARVA- 511
+K DP KL+ E+E E+R REEK R++A+ KAAE A R +K R + + A
Sbjct: 584 EKGDPEKLRIEREEFEKRLREEKERLQAEAKAAEEARRKAKAEAAEKARREREQEREAAR 643
Query: 512 --LQKMERTVEIEHNLEILKELEMLSGCCLSPHLLNGS-EAQKRAFKE-----AHFK--- 560
LQKME+TVEI + +++L+ML L S E F E FK
Sbjct: 644 QALQKMEKTVEINEGIRFMEDLQMLRATGTEGDQLPTSMEVMSPKFSEDMLGLGSFKMES 703
Query: 561 --NPLERIGLFMK 571
NPLE +GL+MK
Sbjct: 704 NSNPLEHLGLYMK 716
>gi|297797327|ref|XP_002866548.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312383|gb|EFH42807.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 486
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 72/105 (68%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V +C +L L H GW F PVDPV L+IPDYF++I PMDLGT+++RL + YS
Sbjct: 170 VMKECETLLNRLWSHKLGWAFRTPVDPVMLNIPDYFTVIKHPMDLGTIRSRLRKGEYSSP 229
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
+F ADVRLTFSN++ YNPP N H MAQ ++ F+ WKS+E+K
Sbjct: 230 LDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFETGWKSIEKK 274
>gi|356542179|ref|XP_003539547.1| PREDICTED: uncharacterized protein LOC100781720 [Glycine max]
Length = 901
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS +L+ LM H GWVFN PVD L + DYFSII+ PMDLGTVK+RL++N Y EF
Sbjct: 566 CSALLEKLMKHKHGWVFNAPVDVEGLGLHDYFSIITHPMDLGTVKSRLNKNWYKSPKEFA 625
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGL 221
DVRLTF NAM YNP +VH MA++L N+F+ +W +E + E+ + GL
Sbjct: 626 EDVRLTFHNAMTYNPKGQDVHIMAEQLLNIFEERWAIIESNYYREI-RYGL 675
>gi|297842055|ref|XP_002888909.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
gi|297334750|gb|EFH65168.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 13/147 (8%)
Query: 104 DRG---VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
D+G + C+ +L LM H +GWVFN PVD V+L + DY +I+ KPMDLGTVKTRL +
Sbjct: 108 DKGTVQILKSCNNLLTKLMKHKSGWVFNTPVDAVRLGLHDYHTIVEKPMDLGTVKTRLSK 167
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAG 220
+ Y EF DVRLTF+NAMLYNP ++VH MA+ L NLF+ KW LE ++
Sbjct: 168 SWYKSPLEFAEDVRLTFNNAMLYNPVGHDVHHMAEFLLNLFEEKWAPLETQYG------- 220
Query: 221 LGKILSGKMMEVNDTRQNCPKTPPLHS 247
+L+ K V D + P + H+
Sbjct: 221 ---LLNRKQQPVRDIDLHAPVSTNTHN 244
>gi|306922427|ref|NP_001105214.2| LOC542112 [Zea mays]
Length = 696
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 94/168 (55%), Gaps = 22/168 (13%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC ILK LM +FN PVD VKL IPDYF I+ PMDLGTVK +L+ Y+ +F
Sbjct: 171 QCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDF 230
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
ADVRLTF+NAM YNP + VH MA +LN +F+ +W+ +E+K +S + K
Sbjct: 231 AADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAA---------TEKH 281
Query: 230 MEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYCARAVEVERAK 277
+EV+ KTPP+ +S +S E CAR E E K
Sbjct: 282 VEVDRADSKRRKTPPV------DRSDVSME-------CARQTEPETPK 316
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 131/235 (55%), Gaps = 37/235 (15%)
Query: 361 KPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQ 420
KPD V+ + +S +D + A+ L + S+ P A E + P D Q
Sbjct: 489 KPDQLVEQERSDVISPADANRPAAIVGLHGED----SESKP-----APGGENSEP--DTQ 537
Query: 421 MSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEA 480
+SP + LRAA+L+SR+AD I+KA R +L G ++E LE+ Q+EEK R+ A
Sbjct: 538 VSPDRLLRAALLRSRYADVIVKA--RGILSQGG--------DKQEELEKLQKEEKERLLA 587
Query: 481 QIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCCLS 540
+ AA A R +AE E K++R ERE AR ALQ+MERTVEI NL LK+LE+L G +
Sbjct: 588 EGTAAMEACRAEAEAEKKRKRNFEREKARQALQEMERTVEINDNLH-LKDLELL-GTATT 645
Query: 541 PHLLNGSEAQKRAFKEAH---------FKNPLERIGLFMKSDYLVEDEDEEILNL 586
H++ S + + + +H NPLE++GLF+K D ++ED+E +L
Sbjct: 646 EHIV--SSVDETSPERSHDGMAGYHPGAVNPLEQLGLFIKVD---DEEDDEQCSL 695
>gi|29569106|gb|AAO84020.1| global transcription factor group E [Zea mays]
Length = 696
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 94/168 (55%), Gaps = 22/168 (13%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC ILK LM +FN PVD VKL IPDYF I+ PMDLGTVK +L+ Y+ +F
Sbjct: 171 QCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDF 230
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
ADVRLTF+NAM YNP + VH MA +LN +F+ +W+ +E+K +S + K
Sbjct: 231 AADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAA---------TEKH 281
Query: 230 MEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYCARAVEVERAK 277
+EV+ KTPP+ +S +S E CAR E E K
Sbjct: 282 VEVDRADSKRRKTPPV------DRSDVSME-------CARQTEPETPK 316
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 131/235 (55%), Gaps = 37/235 (15%)
Query: 361 KPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQ 420
KPD V+ + +S +D + A+ L + S+ P A E + P D Q
Sbjct: 489 KPDQLVEQERSDVISPADANRPAAIVGLHGED----SESKP-----APGGENSEP--DTQ 537
Query: 421 MSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEA 480
+SP + LRAA+L+SR+AD I+KA R +L G ++E LE+ Q+EEK R+ A
Sbjct: 538 VSPDRLLRAALLRSRYADVIVKA--RGILSQGG--------DKQEELEKLQKEEKERLLA 587
Query: 481 QIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCCLS 540
+ AA A R +AE E K++R ERE AR ALQ+MERTVEI NL LK+LE+L G +
Sbjct: 588 EGTAAMEACRAEAEAEKKRKRNFEREKARQALQEMERTVEINDNLH-LKDLELL-GTATT 645
Query: 541 PHLLNGSEAQKRAFKEAH---------FKNPLERIGLFMKSDYLVEDEDEEILNL 586
H++ S + + + +H NPLE++GLF+K D ++ED+E +L
Sbjct: 646 EHIV--SSVDETSPERSHDGMAGYHPGAVNPLEQLGLFIKVD---DEEDDEQCSL 695
>gi|413937647|gb|AFW72198.1| global transcription factor group E [Zea mays]
Length = 696
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 94/168 (55%), Gaps = 22/168 (13%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC ILK LM +FN PVD VKL IPDYF I+ PMDLGTVK +L+ Y+ +F
Sbjct: 171 QCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDF 230
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
ADVRLTF+NAM YNP + VH MA +LN +F+ +W+ +E+K +S + K
Sbjct: 231 AADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAA---------TEKH 281
Query: 230 MEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYCARAVEVERAK 277
+EV+ KTPP+ +S +S E CAR E E K
Sbjct: 282 VEVDRADSKRRKTPPV------DRSDVSME-------CARQTEPETPK 316
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 131/235 (55%), Gaps = 37/235 (15%)
Query: 361 KPDCQVKSTSTSQMSKSDPDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQ 420
KPD V+ + +S +D + A+ L + S+ P A E + P D Q
Sbjct: 489 KPDQLVEQEKSDVISPADANRPAAIVGLHGED----SESKP-----APGGENSEP--DTQ 537
Query: 421 MSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEA 480
+SP + LRAA+L+SR+AD I+KA R +L G ++E LE+ Q+EEK R+ A
Sbjct: 538 VSPDRLLRAALLRSRYADVIVKA--RGILSQGG--------DKQEELEKLQKEEKERLLA 587
Query: 481 QIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCCLS 540
+ AA A R +AE E K++R ERE AR ALQ+MERTVEI NL LK+LE+L G +
Sbjct: 588 EGTAAMEACRAEAEAEKKRKRNFEREKARQALQEMERTVEINDNLH-LKDLELL-GTATT 645
Query: 541 PHLLNGSEAQKRAFKEAH---------FKNPLERIGLFMKSDYLVEDEDEEILNL 586
H++ S + + + +H NPLE++GLF+K D ++ED+E +L
Sbjct: 646 EHIV--SSVDETSPERSHDGMAGYHPGAVNPLEQLGLFIKVD---DEEDDEQCSL 695
>gi|356546972|ref|XP_003541893.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 640
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 75/106 (70%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS +L+ LM H GWVF+ PVD L + DYFSII+ PMDLGTVK+RL++N Y EF
Sbjct: 305 CSSLLEKLMKHKHGWVFDTPVDVEGLGLHDYFSIITHPMDLGTVKSRLNKNWYRSPKEFA 364
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
DVRLTF NAM YNP +VH MA++L+N+F+ +W +E ++ E+
Sbjct: 365 EDVRLTFHNAMTYNPKGQDVHIMAEQLSNIFEERWAIIESNYNREM 410
>gi|413937648|gb|AFW72199.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 728
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 94/168 (55%), Gaps = 22/168 (13%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC ILK LM +FN PVD VKL IPDYF I+ PMDLGTVK +L+ Y+ +F
Sbjct: 187 QCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDF 246
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
ADVRLTF+NAM YNP + VH MA +LN +F+ +W+ +E+K +S + K
Sbjct: 247 AADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAA---------TEKH 297
Query: 230 MEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYCARAVEVERAK 277
+EV+ KTPP+ +S +S E CAR E E K
Sbjct: 298 VEVDRADSKRRKTPPV------DRSDVSME-------CARQTEPETPK 332
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 146/293 (49%), Gaps = 54/293 (18%)
Query: 320 CGKCGSATCGCNLPSDSTHASSDITSERS-LGGDRACSTDASKPDCQVKSTSTSQMSKSD 378
CG S++ S + + SD SE +G + KPD V+ + +S +D
Sbjct: 463 CGSPSSSSSDSESSSSDSDSGSDSESESEKVGSPGKLAKGTKKPDQLVEQEKSDVISPAD 522
Query: 379 PDSDGAVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFAD 438
+ A+ L + S+ P A E + P D Q+SP + LRAA+L+SR+AD
Sbjct: 523 ANRPAAIVGLHGED----SESKP-----APGGENSEP--DTQVSPDRLLRAALLRSRYAD 571
Query: 439 TILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELK 498
I+KA R +L G ++E LE+ Q+EEK R+ A+ AA A R +AE E K
Sbjct: 572 VIVKA--RGILSQGG--------DKQEELEKLQKEEKERLLAEGTAAMEACRAEAEAEKK 621
Query: 499 KQREKEREAARVALQK----------------MERTVEIEHNLEILKELEMLSGCCLSPH 542
++R ERE AR ALQ+ MERTVEI NL LK+LE+L G + H
Sbjct: 622 RKRNFEREKARQALQEASVDLTHQQLQFLILIMERTVEINDNLH-LKDLELL-GTATTEH 679
Query: 543 LLNGSEAQKRAFKEAH---------FKNPLERIGLFMKSDYLVEDEDEEILNL 586
++ S + + + +H NPLE++GLF+K D ++ED+E +L
Sbjct: 680 IV--SSVDETSPERSHDGMAGYHPGAVNPLEQLGLFIKVD---DEEDDEQCSL 727
>gi|356515098|ref|XP_003526238.1| PREDICTED: uncharacterized protein LOC100780669 [Glycine max]
Length = 971
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 73/106 (68%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS +L+ LM H GWVFN PVD L + DYF+II+ PMDLGTVKTRL++N Y EF
Sbjct: 632 CSSLLEKLMRHKHGWVFNSPVDVETLGLHDYFTIITHPMDLGTVKTRLNKNWYKSPKEFA 691
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
DVRLTF NAM YNP +VH MA+ L+ +F+ +W +E ++ E+
Sbjct: 692 EDVRLTFRNAMTYNPQGQDVHIMAELLSKIFEDRWAIIESDYNREM 737
>gi|225446551|ref|XP_002276195.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 654
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 73/106 (68%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C +L+ LM H GWVFN PVD L + DYFSII+ PMDLGTVK+RL++N Y EF
Sbjct: 311 CGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWYKSPREFA 370
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
DVRLTF NAM YNP +VH MA+ L+ +F+ KW +E ++S E+
Sbjct: 371 EDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIEAEYSREL 416
>gi|219888341|gb|ACL54545.1| unknown [Zea mays]
gi|413937646|gb|AFW72197.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 538
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 94/168 (55%), Gaps = 22/168 (13%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC ILK LM +FN PVD VKL IPDYF I+ PMDLGTVK +L+ Y+ +F
Sbjct: 171 QCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDF 230
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
ADVRLTF+NAM YNP + VH MA +LN +F+ +W+ +E+K +S + K
Sbjct: 231 AADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAA---------TEKH 281
Query: 230 MEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYCARAVEVERAK 277
+EV+ KTPP+ +S +S E CAR E E K
Sbjct: 282 VEVDRADSKRRKTPPVD------RSDVSME-------CARQTEPETPK 316
>gi|413937645|gb|AFW72196.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 488
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 94/168 (55%), Gaps = 22/168 (13%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC ILK LM +FN PVD VKL IPDYF I+ PMDLGTVK +L+ Y+ +F
Sbjct: 171 QCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDF 230
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
ADVRLTF+NAM YNP + VH MA +LN +F+ +W+ +E+K +S + K
Sbjct: 231 AADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAA---------TEKH 281
Query: 230 MEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYCARAVEVERAK 277
+EV+ KTPP+ +S +S E CAR E E K
Sbjct: 282 VEVDRADSKRRKTPPVD------RSDVSME-------CARQTEPETPK 316
>gi|238481625|ref|NP_001154792.1| nuclear protein X1 [Arabidopsis thaliana]
gi|238481627|ref|NP_001154793.1| nuclear protein X1 [Arabidopsis thaliana]
gi|10177441|dbj|BAB10737.1| unnamed protein product [Arabidopsis thaliana]
gi|50253452|gb|AAT71928.1| At5g63330 [Arabidopsis thaliana]
gi|60543335|gb|AAX22265.1| At5g63330 [Arabidopsis thaliana]
gi|332010350|gb|AED97733.1| nuclear protein X1 [Arabidopsis thaliana]
gi|332010351|gb|AED97734.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 477
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 73/105 (69%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V +C +L L H +GW F PVDPV L+IPDYF++I PMDLGT+++RL + YS
Sbjct: 161 VMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSP 220
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
+F ADVRLTFSN++ YNPP N H MAQ ++ F+ WKS+E+K
Sbjct: 221 LDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKK 265
>gi|147820894|emb|CAN67478.1| hypothetical protein VITISV_035453 [Vitis vinifera]
Length = 660
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 73/106 (68%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C +L+ LM H GWVFN PVD L + DYFSII+ PMDLGTVK+RL++N Y EF
Sbjct: 311 CGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWYKSPREFA 370
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
DVRLTF NAM YNP +VH MA+ L+ +F+ KW +E ++S E+
Sbjct: 371 EDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIEAEYSREL 416
>gi|357474555|ref|XP_003607562.1| Bromodomain-containing factor [Medicago truncatula]
gi|355508617|gb|AES89759.1| Bromodomain-containing factor [Medicago truncatula]
Length = 980
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 73/106 (68%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS +L+ LM H WVFN PVD L + DYF+II+ PMDLGTVKTRL++N Y EF
Sbjct: 659 CSSLLEKLMKHQYAWVFNTPVDVDGLGLHDYFTIITNPMDLGTVKTRLNKNWYKSPKEFA 718
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
DVRLTF NAM YNP +VH MA++L+ +F+ +W +E ++ E+
Sbjct: 719 EDVRLTFHNAMTYNPKGQDVHAMAEQLSKIFEDRWAIIESDYNREM 764
>gi|413937644|gb|AFW72195.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 494
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 94/168 (55%), Gaps = 22/168 (13%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC ILK LM +FN PVD VKL IPDYF I+ PMDLGTVK +L+ Y+ +F
Sbjct: 171 QCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDF 230
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
ADVRLTF+NAM YNP + VH MA +LN +F+ +W+ +E+K +S + K
Sbjct: 231 AADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAA---------TEKH 281
Query: 230 MEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYCARAVEVERAK 277
+EV+ KTPP+ +S +S E CAR E E K
Sbjct: 282 VEVDRADSKRRKTPPV------DRSDVSME-------CARQTEPETPK 316
>gi|15219397|ref|NP_177458.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
gi|75194105|sp|Q9S7T1.1|GTE3_ARATH RecName: Full=Transcription factor GTE3, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE3; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E3;
Flags: Precursor
gi|5903104|gb|AAD55662.1|AC008017_35 Highly similar to non intermediate filament IFA binding protein
[Arabidopsis thaliana]
gi|12324313|gb|AAG52122.1|AC010556_4 hypothetical protein; 61711-63380 [Arabidopsis thaliana]
gi|56236042|gb|AAV84477.1| At1g73150 [Arabidopsis thaliana]
gi|332197298|gb|AEE35419.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
Length = 461
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 78/112 (69%), Gaps = 3/112 (2%)
Query: 104 DRG---VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
D+G + C+ +L LM H +GW+FN PVD V L + DY +II +PMDLGTVKTRL +
Sbjct: 113 DKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSK 172
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
+LY EF DVRLTF+NAMLYNP ++V+ MA+ L NLF+ KW LE ++
Sbjct: 173 SLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEKWVPLETQY 224
>gi|449465695|ref|XP_004150563.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 629
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Query: 93 IEGPKDKRPKMDRG------VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIIS 146
+ G K R K + G + + C +L+ LM H GWVFN PVD L + DYFSII
Sbjct: 281 LNGKKRSRQKFNYGFGMGTKIFNACVSLLEKLMKHKHGWVFNTPVDVEGLCLHDYFSIIR 340
Query: 147 KPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
PMDLGTVKTRL++N Y EF DVRLTF NAM YNP +VH MA++L +F+ +W
Sbjct: 341 HPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFQNAMTYNPKGQDVHIMAEQLLKIFEDRWV 400
Query: 207 SLEEKWSSEV 216
+E + E+
Sbjct: 401 VIESNYYQEM 410
>gi|440790084|gb|ELR11372.1| Bromodomain containing protein [Acanthamoeba castellanii str. Neff]
Length = 844
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 71/102 (69%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC V+LK+LM H GW FN+PVDP+ L+IPDYF +I PMDLGT+K +LD Y +EF
Sbjct: 143 QCQVLLKTLMTHKFGWPFNQPVDPIALNIPDYFDVIKHPMDLGTIKEQLDSGSYETEEEF 202
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
DVRL F+N YN P +++ MA L++LF+ K++ L+ K
Sbjct: 203 AEDVRLVFTNTFTYNQPGSDIVVMASTLSSLFNEKFEILKAK 244
>gi|449526541|ref|XP_004170272.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE4-like
[Cucumis sativus]
Length = 629
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 103 MDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
M + + C +L+ LM H GWVFN PVD L + DYFSII PMDLGTVKTRL++N
Sbjct: 297 MGTKIFNACVSLLEKLMKHKHGWVFNTPVDVEGLCLHDYFSIIRHPMDLGTVKTRLNKNW 356
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLG 222
Y EF DVRLTF NAM YNP +VH MA++L +F+ +W +E + E+ LG
Sbjct: 357 YKSPKEFAEDVRLTFQNAMTYNPKGQDVHIMAEQLLKIFEDRWVVIESNYYQEM---RLG 413
Query: 223 KILSGKMMEVNDTRQNCPKTPPL 245
G + N R + P+ PL
Sbjct: 414 MEYGGPLPSSNSVRGH-PRPVPL 435
>gi|242065686|ref|XP_002454132.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
gi|241933963|gb|EES07108.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
Length = 711
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 91/154 (59%), Gaps = 10/154 (6%)
Query: 106 GVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
V QC ILK LM +FN PVD KL IPDYF I+ PMDLGTV+ +L+ Y+
Sbjct: 170 AVFKQCEAILKKLMTQKYSHIFNVPVDVDKLQIPDYFDIVKTPMDLGTVQKKLESGSYTS 229
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKIL 225
+F ADVRLTF+NAM YNP + VH MA +LN +F+ +W+ +E+K +S
Sbjct: 230 PSDFAADVRLTFNNAMAYNPKGHAVHDMAIQLNKMFESRWRPIEKKLASAA--------- 280
Query: 226 SGKMMEVNDTRQNCPKTPPL-HSTLSSKKSKMSE 258
+ K +EV+ KTPP+ S +S++ + +E
Sbjct: 281 TEKHVEVDRADSKRRKTPPVDRSDVSTEGVRQTE 314
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 101/162 (62%), Gaps = 19/162 (11%)
Query: 418 DVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKAR 477
D Q+SP + LRAA+L+SR+AD I+KA R +L G ++E LE+ Q+EEKAR
Sbjct: 538 DSQVSPDRLLRAALLRSRYADVIVKA--RGILSQGG--------DKQEELEKLQKEEKAR 587
Query: 478 IEAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGC 537
+ A+ AA A R +AE E K++R+ ERE AR ALQ+MERTVEI NL I K+LEML G
Sbjct: 588 LLAEGNAAMEARRAEAEAEAKRKRDFEREKARQALQEMERTVEINDNLHI-KDLEML-GT 645
Query: 538 CLSPHLLN-----GSEAQKRAFKEAH--FKNPLERIGLFMKS 572
+ H+++ E + H NPLE++GLF+K+
Sbjct: 646 ATTEHIVSSVDETSPERSQDGMAGYHPGSVNPLEQLGLFIKA 687
>gi|302143389|emb|CBI21950.3| unnamed protein product [Vitis vinifera]
Length = 612
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 68/99 (68%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C +L+ LM H GWVFN PVD L + DYFSII+ PMDLGTVK+RL++N Y EF
Sbjct: 290 CGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWYKSPREFA 349
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
DVRLTF NAM YNP +VH MA+ L+ +F+ KW +E
Sbjct: 350 EDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIE 388
>gi|302764766|ref|XP_002965804.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
gi|300166618|gb|EFJ33224.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
Length = 706
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 94/172 (54%), Gaps = 15/172 (8%)
Query: 52 SNQLMMSKPYRSSGGKKMIASEHSKERSSILPF--------NKRQAQEVIEGPKDKRPKM 103
+NQ+ + Y S+ KM E K ++ + P NKRQ E+ R K
Sbjct: 57 ANQMYSTSEYFSAK-DKMPPPEKVKPKALVPPKKGTKGDIDNKRQRVELA------RMKR 109
Query: 104 DRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
+ QC +LK L+ H WVFN PVD VKL + DY +I +PMDLGT+K +L+ Y
Sbjct: 110 MGDIMKQCGTLLKKLITHKHAWVFNEPVDAVKLGLHDYHKVIRRPMDLGTIKKKLEGGHY 169
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
EF DV+LTFSNAM YNPP ++V MA L +FD +W+ ++EK E
Sbjct: 170 RTPVEFADDVKLTFSNAMTYNPPGHDVFIMADILRQIFDERWRCIKEKLEEE 221
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 120/197 (60%), Gaps = 28/197 (14%)
Query: 421 MSPKKALRAAMLKSRFADTILKAQQRTL-LDHGDKADPVKLQQEKERLEQRQREEKARIE 479
+SP+K++RAA+LK RFADTILKA+++T L GD DP KL++E+E LE++ RE+KAR++
Sbjct: 515 VSPEKSVRAALLKGRFADTILKAREKTFPLKSGDNVDPEKLRKEREELERKLREDKARLQ 574
Query: 480 AQIKAAEAASRMKAEIEL---KKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSG 536
A KAAE A + +K+RE EREAAR ALQ+MERTV+++ + EILK+ +++
Sbjct: 575 ADAKAAEVARKKAEAEAATEARKKREVEREAARKALQQMERTVDLDAHCEILKDFDLMRT 634
Query: 537 CCL--------------SPHLLNGSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDE--D 580
SP L G + A N LE++GLFMK D +D+ D
Sbjct: 635 SSKEHFQSSAGEVSPPNSPDGLPGFTLPQGA------GNALEQLGLFMKLDEEEDDKQGD 688
Query: 581 EEILNLDGDG--EEGEI 595
E+ D +G EEGEI
Sbjct: 689 GEVAYADENGEVEEGEI 705
>gi|357144539|ref|XP_003573328.1| PREDICTED: transcription factor GTE10-like [Brachypodium
distachyon]
Length = 777
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 75/102 (73%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C +L++LM H G F+ PVDPVKL+IPDYF I+ PMDLGT++ +L+ Y EF
Sbjct: 159 KCQDLLRNLMRHRYGQTFSIPVDPVKLNIPDYFDIVKHPMDLGTIQKKLNSGSYPTPWEF 218
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
ADVRLTFSNA+LYNP N VH+MA+ +++ F+ +WK +E+K
Sbjct: 219 AADVRLTFSNAILYNPHNNVVHQMAKTMSSHFEPRWKPIEKK 260
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 136/231 (58%), Gaps = 25/231 (10%)
Query: 384 AVSALDDGN-----LCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFAD 438
+V +LD N L + Q T P SA E+ + + Q+SP K RAA+LKSRFAD
Sbjct: 552 SVVSLDQENDSRNTLNITEQSTDPVLISADNEDEN--VSEKQVSPDKKYRAALLKSRFAD 609
Query: 439 TILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAE-------AASRM 491
TILKA+++ L D + DP K+Q+E+E LE+ QREE+AR++A+ KAAE A +
Sbjct: 610 TILKAREKAL-DQVAQKDPEKVQREREELERLQREERARLQAEAKAAEDARRRAEAVAAA 668
Query: 492 KAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCCLSPHL-LNGSEAQ 550
+A E K+QRE EREAAR ALQ+ME+TVEI LK+ EML H L G
Sbjct: 669 EAAAEAKRQRELEREAARKALQQMEKTVEINEGSLFLKDFEMLGTVAGEQHPDLVGEMNP 728
Query: 551 KRAFKEAHFK---NPLERIGLFMKSDYLVEDEDEEI---LNLDGDGEEGEI 595
+ F+ NPLE++GL+MK+D ++EDEE+ D EEGEI
Sbjct: 729 THTPEGLGFQLGGNPLEQLGLYMKND---DEEDEEVGSAYEPTVDVEEGEI 776
>gi|302823131|ref|XP_002993220.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
gi|300138990|gb|EFJ05740.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
Length = 702
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 94/172 (54%), Gaps = 15/172 (8%)
Query: 52 SNQLMMSKPYRSSGGKKMIASEHSKERSSILPF--------NKRQAQEVIEGPKDKRPKM 103
+NQ+ + Y S+ K M E K ++ + P NKRQ E+ R K
Sbjct: 57 ANQMYSTSEYFSAKDK-MPPPEKVKPKALVPPKKGTKGDIDNKRQRVELA------RMKR 109
Query: 104 DRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
+ QC +LK L+ H WVFN PVD VKL + DY +I +PMDLGT+K +L+ Y
Sbjct: 110 MGDIMKQCGTLLKKLITHKHAWVFNEPVDAVKLGLHDYHKVIRRPMDLGTIKKKLEGGHY 169
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
EF DV+LTFSNAM YNPP ++V MA L +FD +W+ ++EK E
Sbjct: 170 RTPVEFADDVKLTFSNAMTYNPPGHDVFIMADILRQIFDERWRCIKEKLEEE 221
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 120/197 (60%), Gaps = 28/197 (14%)
Query: 421 MSPKKALRAAMLKSRFADTILKAQQRTL-LDHGDKADPVKLQQEKERLEQRQREEKARIE 479
+SP+K++RAA+LK RFADTILKA+++T L GD DP KL++E+E LE++ RE+KAR++
Sbjct: 511 VSPEKSVRAALLKGRFADTILKAREKTFPLKSGDNVDPEKLRKEREELERKLREDKARLQ 570
Query: 480 AQIKAAEAASRMKAEIEL---KKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSG 536
A KAAE A + +K+RE EREAAR ALQ+MERTV+++ + EILK+ +++
Sbjct: 571 ADAKAAEVARKKAEAEAATEARKKREVEREAARKALQQMERTVDLDAHCEILKDFDLMRT 630
Query: 537 CCL--------------SPHLLNGSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDE--D 580
SP L G + A N LE++GLFMK D +D+ D
Sbjct: 631 SSKEHFQSSAGEVSPPNSPDGLPGFTLPQGA------GNALEQLGLFMKLDEEEDDKQGD 684
Query: 581 EEILNLDGDG--EEGEI 595
E+ D +G EEGEI
Sbjct: 685 GEVAYADENGEVEEGEI 701
>gi|413936534|gb|AFW71085.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 667
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+ S +L LM H GWVFN+PVDPV L + DYF+II PMDLGT++ RL R Y EF
Sbjct: 328 KSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSRGQYRNPKEF 387
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
DVRLTF NAM YNP +VH MA++L+ +F+ +W +E
Sbjct: 388 AEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIE 427
>gi|413936535|gb|AFW71086.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 671
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+ S +L LM H GWVFN+PVDPV L + DYF+II PMDLGT++ RL R Y EF
Sbjct: 328 KSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSRGQYRNPKEF 387
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
DVRLTF NAM YNP +VH MA++L+ +F+ +W +E
Sbjct: 388 AEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIE 427
>gi|326502374|dbj|BAJ95250.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 315
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 87/145 (60%), Gaps = 10/145 (6%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
+ QC ILK LM +FN PVD KL+IPDY II PMDLGT+K +LD Y+
Sbjct: 157 ILKQCEAILKKLMTQKFSHIFNVPVDVEKLNIPDYNEIIKHPMDLGTIKKKLDSGSYTSP 216
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILS 226
+F ADVRLTF+NA+ YNP + VH MA +LN +F+ +WK++E+K +S K +
Sbjct: 217 SDFAADVRLTFNNAITYNPRGHAVHDMAIQLNKMFESRWKTVEKKLASAAIKPHV----- 271
Query: 227 GKMMEVNDTRQNCPKTPPL-HSTLS 250
EV+ KTPP+ HS LS
Sbjct: 272 ----EVDRADSKRRKTPPVDHSDLS 292
>gi|413921385|gb|AFW61317.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 770
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 73/103 (70%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC+ +LKSLM H F PVD VKL+IPDYF I+ +PMDLGT++ R+ +YS EF
Sbjct: 175 QCANLLKSLMSHVWASPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKRMKAGMYSTPPEF 234
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
ADVRLTFSNAM YNP N+VH MA+ L+ F+ +WK +E+K
Sbjct: 235 AADVRLTFSNAMNYNPANNDVHLMAKTLSKNFESRWKLIEKKL 277
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 133/219 (60%), Gaps = 21/219 (9%)
Query: 387 ALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQR 446
+LD NL Q T P + SA E + ++SP+K +RAA+L+SRFADTILKA+++
Sbjct: 562 SLDTLNL--PEQSTDPVSVSAYGEGG---YVSEKVSPEKQIRAALLRSRFADTILKAREK 616
Query: 447 TLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASR-------MKAEIELKK 499
L D K DP KL++E+E LE+ QR+E+AR++A+ KAAE A + +A E K+
Sbjct: 617 AL-DQTTKKDPEKLRREREELERLQRQERARLQAEAKAAEDACKRAEEAAAAEAAAEAKR 675
Query: 500 QREKEREAARVALQKMERTVEIEHNLEILKELEMLSG--CCLSPHLLN-GSEAQKRAFKE 556
QR+ EREAAR ALQ+MERTV+I LK+LEML G C P+L+ GS F+
Sbjct: 676 QRDIEREAARKALQEMERTVDINGGSHFLKDLEMLRGITCEEMPNLVGEGSP----GFQL 731
Query: 557 AHFKNPLERIGLFMKSDYLVEDEDEEILNLDGDGEEGEI 595
N L ++GL+MK D E+ D + D EEGEI
Sbjct: 732 GS-SNALAKLGLYMKDDEDDEEGDLADAPVVVDIEEGEI 769
>gi|110736040|dbj|BAE99992.1| hypothetical protein [Arabidopsis thaliana]
Length = 461
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 104 DRG---VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
D+G + C+ +L LM H +GW+FN PVD V L + DY +II +PMDL TVKTRL +
Sbjct: 113 DKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLETVKTRLSK 172
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
+LY EF DVRLTF+NAMLYNP ++V+ MA+ L NLF+ KW LE ++
Sbjct: 173 SLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEKWVPLETQY 224
>gi|413941779|gb|AFW74428.1| hypothetical protein ZEAMMB73_413666 [Zea mays]
Length = 757
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 73/103 (70%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC+ +LKS+M H F PVD VKL+IPDYF I+ +PMDLGT++ +L +YS EF
Sbjct: 172 QCANLLKSIMSHVWAGPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKKLKAGMYSTPREF 231
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
ADVRLTFSNAM YNP N+VH MA+ L+ F+ +WK +E+K
Sbjct: 232 AADVRLTFSNAMNYNPVNNDVHLMAKTLSKNFETRWKLIEKKL 274
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 126/206 (61%), Gaps = 16/206 (7%)
Query: 398 QLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADP 457
Q T P + SA E + + Q+SP K +RAA+L+SRFADTILKA+++ L D K DP
Sbjct: 559 QSTNPISVSADGEGGN--VSEKQVSPDKQIRAALLRSRFADTILKAREKAL-DQTTKKDP 615
Query: 458 VKLQQEKERLEQRQREEKARIEAQIKAAEAASR-------MKAEIELKKQREKEREAARV 510
KL++E+E LE+ QREE+AR++A+ KAAE + +A E K+QRE EREAAR
Sbjct: 616 EKLRREREELERVQREERARLQAEAKAAEDVRKRAEAAAAAEAAAEAKRQRELEREAARK 675
Query: 511 ALQKMERTVEIEHNLEILKELEMLSGCCLSPHLLNGSEAQKRAFKEAHFKNPLERIGLFM 570
ALQ+ME+TV+I LK+LEML G + N F+ N LE++GL+M
Sbjct: 676 ALQEMEKTVDINEGSHFLKDLEML-GSVTGEQIPNLVGETSPGFQMGS--NTLEKLGLYM 732
Query: 571 KSDYLVEDEDEEILNLD-GDGEEGEI 595
K+D +DED + + D EEGEI
Sbjct: 733 KNDE--DDEDGDFTDEPVADVEEGEI 756
>gi|413925979|gb|AFW65911.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
gi|413925980|gb|AFW65912.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 665
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 67/100 (67%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+ S +L LM H GWVFN+PVDPV L + DYF+II PMDLGT++ RL R Y EF
Sbjct: 322 KSSSLLSRLMKHKFGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRLSRGQYRNPKEF 381
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
DVRLTF NAM YNP +VH MA++L +F+ +W +E
Sbjct: 382 AEDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIE 421
>gi|242055997|ref|XP_002457144.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
gi|241929119|gb|EES02264.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
Length = 482
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 72/110 (65%)
Query: 100 RPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLD 159
R K+ V CSV+L+ LM H WVFN+PVD L + DY +II+KPMDLGTVK++L
Sbjct: 130 RRKLYAPVFKTCSVLLQRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKLG 189
Query: 160 RNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
Y EF DVRLTF NAM YNP +VH MA++L N+F+ KW +E
Sbjct: 190 AGQYKSPREFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEIE 239
>gi|413925981|gb|AFW65913.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 670
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 67/100 (67%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+ S +L LM H GWVFN+PVDPV L + DYF+II PMDLGT++ RL R Y EF
Sbjct: 322 KSSSLLSRLMKHKFGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRLSRGQYRNPKEF 381
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
DVRLTF NAM YNP +VH MA++L +F+ +W +E
Sbjct: 382 AEDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIE 421
>gi|242061170|ref|XP_002451874.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
gi|241931705|gb|EES04850.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
Length = 654
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+ S +L LM H GWVFN+PVDPV L + DYF+II PMDLGT++ RL Y EF
Sbjct: 363 KSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSHGQYRNPKEF 422
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
DVRLTF NAM YNP +VH MA++L+ +F+ +W +E
Sbjct: 423 AEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIE 462
>gi|357149985|ref|XP_003575300.1| PREDICTED: transcription factor GTE9-like [Brachypodium distachyon]
Length = 705
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 72/109 (66%)
Query: 106 GVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
V QC ILK LM +FN PVD KL+IPDY I+ PMDLGT+K +LD Y+
Sbjct: 162 AVLKQCEAILKKLMTQKYSHIFNVPVDVEKLNIPDYNDIVKHPMDLGTIKKKLDSGSYTS 221
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSS 214
F ADVRLTF+NA+ YNP + VH MA +LN +F+ +WK++E+K +S
Sbjct: 222 PSSFAADVRLTFNNAITYNPRGHAVHDMAIQLNKIFESRWKTVEKKLAS 270
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 121/221 (54%), Gaps = 23/221 (10%)
Query: 384 AVSALDDGNLCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKA 443
+S +D + +L ++S +A E D ++SP K LRAA+L+ R+AD I+KA
Sbjct: 498 VISPIDANHTAADVELREQDSESKAAPEGENAKPDREVSPDKLLRAAVLRGRYADVIVKA 557
Query: 444 QQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREK 503
R +L G + E LE+ Q+EEK R+ A+ AA A + +AE E K++R+
Sbjct: 558 --RGILSQGG--------DKHEELEKLQKEEKERLLAEGNAAMEARKAEAEAESKRKRDL 607
Query: 504 EREAARVALQKMERTVEIEHNLEILKELEMLSGCCLSPHLLNGSEAQKRAFKEAHFKNP- 562
ERE AR ALQ+ME+TVEI N+ KELEML G + H++ S + + + + P
Sbjct: 608 EREKARQALQEMEKTVEINDNV-YPKELEML-GTATTEHIV--SSVDETSPEHSQDGMPS 663
Query: 563 --------LERIGLFMKSDYLVEDEDEEILNLDGDGEEGEI 595
LE++GLFMK D E+E+ + D EEGEI
Sbjct: 664 FLPGSGSMLEKLGLFMKVDEEEEEEEPNSIPSSKDAEEGEI 704
>gi|255568313|ref|XP_002525131.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223535590|gb|EEF37258.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 742
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 72/110 (65%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
+ CS +L+ LM H GWVF PVD L + DYF+II PMDLGTVKTRL++N Y
Sbjct: 399 IFKNCSALLEKLMKHKYGWVFKSPVDVKGLGLHDYFTIIKHPMDLGTVKTRLNKNWYKSP 458
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
+EF DVRLTF NAM YNP +VH MA+ L LF+ +W ++ ++ E+
Sbjct: 459 EEFAEDVRLTFHNAMRYNPKGQDVHVMAEILLKLFEDRWVVIKSEFDREM 508
>gi|224146489|ref|XP_002326024.1| global transcription factor group [Populus trichocarpa]
gi|222862899|gb|EEF00406.1| global transcription factor group [Populus trichocarpa]
Length = 393
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 71/110 (64%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
+ CS +L LM H GWVFN PVD L + DYF II PMDLGTVK+RL +N Y
Sbjct: 75 IFKNCSALLDKLMKHKHGWVFNTPVDVKGLGLHDYFIIIKHPMDLGTVKSRLTKNWYKSP 134
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
+EF DVRLTF NAM YNP +VH MA++L ++F+ KW ++ + E+
Sbjct: 135 EEFAEDVRLTFHNAMKYNPKGQDVHVMAEQLLDIFETKWAVIKSDYDHEM 184
>gi|168003377|ref|XP_001754389.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694491|gb|EDQ80839.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 694
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 98/168 (58%), Gaps = 14/168 (8%)
Query: 51 ESNQLMMSKPYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMD--RG-- 106
++N L ++ + SG KM A E +K + + + ++G +R K++ RG
Sbjct: 195 KANALYVNSEF-VSGKDKMPAPEKAKAKRGV------GEKGTLDGRDPRRQKVEAARGKR 247
Query: 107 ---VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
+ QC +L+ LM H GWVFN PVD KL + DY SII KPMDLGT+K +L Y
Sbjct: 248 MGEMLKQCMTLLRKLMTHKHGWVFNEPVDAEKLGLHDYHSIIKKPMDLGTIKKKLHLKQY 307
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
+ EF D+RLTFSNAM YNP ++V+ MA+ L N+F+ WK++ K
Sbjct: 308 ASPLEFGEDIRLTFSNAMTYNPVGHDVYVMAELLKNMFEEWWKNMGRK 355
>gi|413921384|gb|AFW61316.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 558
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC+ +LKSLM H F PVD VKL+IPDYF I+ +PMDLGT++ R+ +YS EF
Sbjct: 175 QCANLLKSLMSHVWASPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKRMKAGMYSTPPEF 234
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
ADVRLTFSNAM YNP N+VH MA+ L+ F+ +WK +E+K
Sbjct: 235 AADVRLTFSNAMNYNPANNDVHLMAKTLSKNFESRWKLIEKK 276
>gi|302142921|emb|CBI20216.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 65/99 (65%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS +L LM H GWVFN PVD L + DY+SII PMD GTVK+RL +N Y EF
Sbjct: 129 CSNLLAKLMKHKHGWVFNNPVDVKGLGLHDYYSIIKHPMDFGTVKSRLSKNWYKSPREFA 188
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
DVRLT NAM YNP +VH MA+EL +F+ KW ++E
Sbjct: 189 EDVRLTLQNAMTYNPKGQDVHCMAEELLKIFEEKWAAIE 227
>gi|225461616|ref|XP_002283002.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 597
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 65/99 (65%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS +L LM H GWVFN PVD L + DY+SII PMD GTVK+RL +N Y EF
Sbjct: 259 CSNLLAKLMKHKHGWVFNNPVDVKGLGLHDYYSIIKHPMDFGTVKSRLSKNWYKSPREFA 318
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
DVRLT NAM YNP +VH MA+EL +F+ KW ++E
Sbjct: 319 EDVRLTLQNAMTYNPKGQDVHCMAEELLKIFEEKWAAIE 357
>gi|357141014|ref|XP_003572045.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 629
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+ S +L LM H GWVFN+PVDPV L + DYF+II PMDLGT+K +L R Y EF
Sbjct: 286 KSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFAIIKHPMDLGTIKAQLTRGQYRNPKEF 345
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
DVRLTF NAM YNP +VH MA++L +F+ +W ++
Sbjct: 346 ADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIQ 385
>gi|295828222|gb|ADG37780.1| AT1G06230-like protein [Neslia paniculata]
Length = 210
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 70/109 (64%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V CS +L+ LM H GWVFN PVD L + DYF+II PMDLGT+K+ L +N+Y
Sbjct: 102 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSP 161
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
EF DVRLTF NAM YNP +VH MA+ L +F+ +W +E ++ E
Sbjct: 162 REFADDVRLTFHNAMTYNPAGQDVHVMAETLLQIFEERWAVIEADYNRE 210
>gi|295828216|gb|ADG37777.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 70/109 (64%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V CS +L+ LM H GWVFN PVD L + DYF+II PMDLGT+K+ L +N+Y
Sbjct: 102 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSP 161
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
EF DVRLTF NAM YNP +VH MA+ L +F+ +W +E ++ E
Sbjct: 162 REFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERWAVIEADYNRE 210
>gi|295828210|gb|ADG37774.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828220|gb|ADG37779.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 70/109 (64%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V CS +L+ LM H GWVFN PVD L + DYF+II PMDLGT+K+ L +N+Y
Sbjct: 102 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSP 161
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
EF DVRLTF NAM YNP +VH MA+ L +F+ +W +E ++ E
Sbjct: 162 REFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERWAVIEADYNRE 210
>gi|295828212|gb|ADG37775.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 70/109 (64%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V CS +L+ LM H GWVFN PVD L + DYF+II PMDLGT+K+ L +N+Y
Sbjct: 102 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNIYKSP 161
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
EF DVRLTF NAM YNP +VH MA+ L +F+ +W +E ++ E
Sbjct: 162 REFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERWAVIEADYNRE 210
>gi|326489531|dbj|BAK01746.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 73/115 (63%)
Query: 95 GPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTV 154
G + R K+ V C+V+L LM H GWVFN PVD L + DY +II+KPMDLGTV
Sbjct: 114 GSAEARRKLYAPVFRSCAVVLARLMKHKHGWVFNVPVDASALGLHDYHTIITKPMDLGTV 173
Query: 155 KTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
K+RL Y EF +VRLTF NAM YNP +V+ MA++L N+F+ KW +E
Sbjct: 174 KSRLAAGHYKSPREFATEVRLTFQNAMRYNPKGQDVYFMAEQLLNMFEEKWPEIE 228
>gi|218190413|gb|EEC72840.1| hypothetical protein OsI_06575 [Oryza sativa Indica Group]
Length = 420
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 65/96 (67%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L LM H GWVFN+PVD V L + DYF+II PMDLGT+KTRL Y EF DV
Sbjct: 86 LLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPREFADDV 145
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
RLTF NAM YNP +VH MA++L +F+++W +E
Sbjct: 146 RLTFHNAMTYNPKGQDVHFMAEQLLGIFEVQWPEIE 181
>gi|414875721|tpg|DAA52852.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 490
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 70/110 (63%)
Query: 100 RPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLD 159
R K+ V C+ +L LM H WVFN+PVD L + DY +II+KPMDLGTVK++L
Sbjct: 120 RRKLYAPVFKTCAALLSRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKLG 179
Query: 160 RNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
Y EF DVRLTF NAM YNP +VH MA++L N+F+ KW +E
Sbjct: 180 AGQYKSPREFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEIE 229
>gi|125581496|gb|EAZ22427.1| hypothetical protein OsJ_06088 [Oryza sativa Japonica Group]
Length = 656
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 64/96 (66%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L LM H GWVFN+PVD V L + DYF+II PMDLGT+KTRL Y EF DV
Sbjct: 322 LLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPREFADDV 381
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
RLTF NAM YNP +VH MA++L +F+ +W +E
Sbjct: 382 RLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIE 417
>gi|295828214|gb|ADG37776.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828218|gb|ADG37778.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 69/109 (63%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V CS +L+ LM H GWVFN PVD L + DYF+II PMDLGT+K+ L +N Y
Sbjct: 102 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNXYKSP 161
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
EF DVRLTF NAM YNP +VH MA+ L +F+ +W +E ++ E
Sbjct: 162 REFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERWAVIEADYNRE 210
>gi|297598920|ref|NP_001046443.2| Os02g0250300 [Oryza sativa Japonica Group]
gi|255670765|dbj|BAF08357.2| Os02g0250300 [Oryza sativa Japonica Group]
Length = 600
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 64/96 (66%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L LM H GWVFN+PVD V L + DYF+II PMDLGT+KTRL Y EF DV
Sbjct: 322 LLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPREFADDV 381
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
RLTF NAM YNP +VH MA++L +F+ +W +E
Sbjct: 382 RLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIE 417
>gi|15221424|ref|NP_172113.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|30679613|ref|NP_849601.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|334182337|ref|NP_001184922.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|75174943|sp|Q9LNC4.1|GTE4_ARATH RecName: Full=Transcription factor GTE4; AltName:
Full=Bromodomain-containing protein GTE4; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E4
gi|8844128|gb|AAF80220.1|AC025290_9 Contains similarity to a Ring3 protein from Homo sapiens gi|133157
and contains a bromodomain PF|00439. EST gb|F14211 comes
from this gene [Arabidopsis thaliana]
gi|332189843|gb|AEE27964.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189844|gb|AEE27965.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189845|gb|AEE27966.1| global transcription factor group E4 [Arabidopsis thaliana]
Length = 766
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 14/143 (9%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V CS +L+ LM H GWVFN PVD L + DY++II PMDLGT+K+ L +NLY
Sbjct: 421 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSP 480
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILS 226
EF DVRLTF NAM YNP +VH MA L +F+ +W +E ++ E+ + ++
Sbjct: 481 REFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNREM------RFVT 534
Query: 227 GKMMEVNDTRQNCPKTPPLHSTL 249
G M N P TP + S L
Sbjct: 535 GYEM-------NLP-TPTMRSRL 549
>gi|222617974|gb|EEE54106.1| hypothetical protein OsJ_00865 [Oryza sativa Japonica Group]
Length = 508
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 68/110 (61%)
Query: 100 RPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLD 159
R K+ V C +L LM H WVFN PVD L + DY +II+KPMDLGTVK+RL
Sbjct: 135 RRKLYAPVFKSCGALLARLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRLA 194
Query: 160 RNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
Y EF DVRLTF NAM YNP +VH MA++L N+F+ KW +E
Sbjct: 195 AGHYKSPREFAGDVRLTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEIE 244
>gi|297843426|ref|XP_002889594.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335436|gb|EFH65853.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 767
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 70/110 (63%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V CS +L+ LM H GWVFN PVD L + DY++II PMDLGT+K+ L +NLY
Sbjct: 421 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSP 480
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF DVRLTF NAM YNP +VH MA L +F+ +W +E ++ E+
Sbjct: 481 REFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNREM 530
>gi|449444709|ref|XP_004140116.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449516325|ref|XP_004165197.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 667
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 84/136 (61%), Gaps = 5/136 (3%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS +L+ L+ H GWVF+ PVD L + DY++II PMDLGTVK+RL++N Y EF
Sbjct: 333 CSSLLEKLIKHKYGWVFDAPVDVQGLGLHDYYTIIKHPMDLGTVKSRLNKNWYKSPKEFA 392
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMM 230
DVRLTF NAM YNP +V+ MA +L ++F+ +W +E ++ E+ + GL G +
Sbjct: 393 EDVRLTFRNAMTYNPKGQDVYVMADQLLSIFEDRWVIIEADYNREM-RFGLD---YGAAL 448
Query: 231 EVNDTRQ-NCPKTPPL 245
+R+ P PPL
Sbjct: 449 STPTSRKARLPPPPPL 464
>gi|218187737|gb|EEC70164.1| hypothetical protein OsI_00884 [Oryza sativa Indica Group]
Length = 512
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 68/110 (61%)
Query: 100 RPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLD 159
R K+ V C +L LM H WVFN PVD L + DY +II+KPMDLGTVK+RL
Sbjct: 85 RRKLYAPVFKSCGALLARLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRLA 144
Query: 160 RNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
Y EF DVRLTF NAM YNP +VH MA++L N+F+ KW +E
Sbjct: 145 AGHYKSPREFAGDVRLTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEIE 194
>gi|326496376|dbj|BAJ94650.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 662
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 67/100 (67%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+ S +L LM H GWVFN+PVDPV L + DYF+II PMDLGT+K +L R Y EF
Sbjct: 326 KSSSLLCRLMKHKFGWVFNKPVDPVALGLHDYFAIIKHPMDLGTIKGQLTRGHYRDPKEF 385
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
DVRLTF NAM YNP +VH MA++L +F+ +W +E
Sbjct: 386 ANDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIE 425
>gi|413947734|gb|AFW80383.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
gi|413947735|gb|AFW80384.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
Length = 490
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 70/110 (63%)
Query: 100 RPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLD 159
R K+ V CS +L+ LM H WVFN PVD L + DY +II+KPMDLGTVK++L
Sbjct: 122 RRKLYAPVFKTCSALLQRLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSKLA 181
Query: 160 RNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
Y EF DVRLTF NAM YNP +VH MA++L N+F+ KW +E
Sbjct: 182 AGQYRSPREFAGDVRLTFRNAMTYNPKGQDVHFMAEQLLNMFEEKWLEIE 231
>gi|414875719|tpg|DAA52850.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
gi|414875720|tpg|DAA52851.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 948
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 71/112 (63%)
Query: 98 DKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTR 157
+ R K+ V C+ +L LM H WVFN+PVD L + DY +II+KPMDLGTVK++
Sbjct: 118 EARRKLYAPVFKTCAALLSRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSK 177
Query: 158 LDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
L Y EF DVRLTF NAM YNP +VH MA++L N+F+ KW +E
Sbjct: 178 LGAGQYKSPREFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEIE 229
>gi|224013522|ref|XP_002296425.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968777|gb|EED87121.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1718
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 69/106 (65%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C IL+ L +H GWVF PVDPV+L + DYF +I KPMDLGT+ RLD Y D+F
Sbjct: 834 KCVEILRELQIHEHGWVFATPVDPVELGLDDYFDVIKKPMDLGTISRRLDNGSYHAFDDF 893
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
+DVRLTF NAM YN + VH+MA+EL FD +K L ++ E
Sbjct: 894 KSDVRLTFENAMKYNDENSVVHEMAKELKKKFDTDYKKLMKQLEKE 939
>gi|357127683|ref|XP_003565508.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 494
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 72/115 (62%)
Query: 95 GPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTV 154
G + R K+ V C ++L LM H GWVFN PVD L + DY +II+KPMDLGTV
Sbjct: 114 GSAEARRKLYAPVFKSCGLLLTRLMKHKHGWVFNVPVDASALGLHDYHTIITKPMDLGTV 173
Query: 155 KTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
K+RL Y EF +VRLTF NAM YNP +V+ MA++L N+F+ KW +E
Sbjct: 174 KSRLAEGHYKSPREFATEVRLTFQNAMKYNPKGQDVYFMAEQLLNMFEEKWPDIE 228
>gi|297850172|ref|XP_002892967.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
gi|297338809|gb|EFH69226.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
Length = 482
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 73/106 (68%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
+ C+ +L LM H WVF+ PVD L + DY +I+ +PMDLGTVKT+L +NLY
Sbjct: 132 IFKNCNSLLTKLMKHKCAWVFHVPVDAEGLGLHDYHNIVKEPMDLGTVKTKLGKNLYKSP 191
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
+F DVRLTF+NA+LYNP ++VH+ A+ L N+F+ KW S+E ++
Sbjct: 192 LDFAEDVRLTFNNAILYNPVGHDVHRFAELLLNMFEDKWVSIEMQY 237
>gi|168024468|ref|XP_001764758.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684052|gb|EDQ70457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 317
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC+ +L+ LM H GWVFN PVD KL + DY SII KPMDLGT+K +L Y EF
Sbjct: 80 QCTTLLRKLMTHKHGWVFNEPVDAEKLGLHDYHSIIKKPMDLGTIKKKLHGKGYPSPVEF 139
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
D+RLTF+NAM YNP ++V+ MA+ L ++F+ WK++ K
Sbjct: 140 AEDIRLTFANAMTYNPVGHDVYVMAELLKSIFEEWWKNMSRK 181
>gi|397567839|gb|EJK45812.1| hypothetical protein THAOC_35556, partial [Thalassiosira oceanica]
Length = 1238
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 67/99 (67%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+CS ILKSL H GWVF PV+PV+L I DYF II KPMDLGT+ +LD+ LY ++F
Sbjct: 739 RCSEILKSLQNHEHGWVFATPVNPVELGIDDYFDIIKKPMDLGTIGEKLDQELYHSFEDF 798
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
ADV+LTF NAM YN + VH MA+ L FD+ + +
Sbjct: 799 RADVQLTFENAMKYNEEQTVVHDMAKALKKKFDLDYNKM 837
>gi|224056555|ref|XP_002298908.1| global transcription factor group [Populus trichocarpa]
gi|222846166|gb|EEE83713.1| global transcription factor group [Populus trichocarpa]
Length = 411
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 64/101 (63%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C +L LM H GWVFN PVD KL + DY+ II PMDLGTVK+RL +N Y EF
Sbjct: 35 CGELLGKLMKHQYGWVFNEPVDAKKLKLHDYYKIIKHPMDLGTVKSRLSKNWYKSPKEFA 94
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
DVRLTF+NAM YN +VH MA +L +F+ W + + K
Sbjct: 95 EDVRLTFNNAMKYNEKGQDVHAMADKLLKIFEENWANFKAK 135
>gi|297828908|ref|XP_002882336.1| hypothetical protein ARALYDRAFT_896441 [Arabidopsis lyrata subsp.
lyrata]
gi|297328176|gb|EFH58595.1| hypothetical protein ARALYDRAFT_896441 [Arabidopsis lyrata subsp.
lyrata]
Length = 319
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 90/141 (63%), Gaps = 12/141 (8%)
Query: 86 KRQAQEVIEGPKD-----KRPKMDRGVT--HQCSVILKSLMMHPAGWVFNRPVDPVKLDI 138
KR A+EV E D K+ K+DR ++ +C +LKSL GW F V D
Sbjct: 21 KRGAKEVEEVNVDQTNTKKKQKLDRELSLRSRCHKVLKSLKEEWFGWRFENLVT----DN 76
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLY-SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQEL 197
PDYFS ISKPMD T+K++LD+NLY + EF DVRL F+NA+ Y PPEN +HK A+ L
Sbjct: 77 PDYFSAISKPMDFVTIKSKLDKNLYVNTVREFPEDVRLVFANAVRYYPPENMLHKNAKRL 136
Query: 198 NNLFDIKWKSLEEKWSSEVPK 218
+F+I+W+S+++K +SEV +
Sbjct: 137 KKVFEIRWESVKKKLASEVSR 157
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 32/156 (20%)
Query: 421 MSPKKALRAAMLKSRFADTILKAQQRTLLDH-GDKADP-VKLQQEKERLEQRQREEKARI 478
+SPKKALRAA ++ RF+D I+KA+ R L+D +KAD +++++EK+ LE R+R+ KA +
Sbjct: 181 LSPKKALRAATIRIRFSDAIVKARYRKLIDESSNKADVMMRMKKEKQLLETRERQVKATV 240
Query: 479 EAQIKAAEAASRMKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCC 538
EA+ +AA R+KA E + REK E A+ E +LE KE+ L C
Sbjct: 241 EAETRAA----RLKAVREERLAREKLEEEAK---------SNFEDHLETEKEIVKL---C 284
Query: 539 LSPHLLNGSEAQKRAFKEAHFKNPLERIGLFMKSDY 574
+L A+ R K+ +GL ++ DY
Sbjct: 285 GGSYL-----ARTRCLKD---------LGLVLRIDY 306
>gi|281209232|gb|EFA83405.1| bromodomain-containing protein [Polysphondylium pallidum PN500]
Length = 1172
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Query: 106 GVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
G +C IL LM H G+ F PVDP+ L+I DYF+ I PMD GT++ L +Y
Sbjct: 530 GPMKRCLEILDFLMNHQMGYPFLVPVDPIALNILDYFTYIKHPMDFGTIRNSLLDGVYEA 589
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW-KSLEEKWSSEV 216
DEF AD RL FSNA LYNPP N VH MA+ L +LF+ K+ K+L E S E+
Sbjct: 590 PDEFAADCRLVFSNARLYNPPANQVHIMAKTLEDLFEKKYAKALAEPPSPEI 641
>gi|325190099|emb|CCA24581.1| histone acetyltransferase putative [Albugo laibachii Nc14]
Length = 2117
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 69/97 (71%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK +M H GWVF+ PVD V L+IPDYF I +PMDLGT+K +LD Y F +D
Sbjct: 1099 VLLKGMMEHKFGWVFSSPVDTVALEIPDYFRTIRRPMDLGTIKKKLDLGFYKHIQHFASD 1158
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
VRLTF+NA LYN ++VH +A+++ N F+++++ LE
Sbjct: 1159 VRLTFNNAKLYNSEGSDVHNLAKDMLNDFNVEFRKLE 1195
>gi|18394534|ref|NP_564037.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|75151921|sp|Q8H1D7.1|GTE5_ARATH RecName: Full=Transcription factor GTE5, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE5; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E5;
Flags: Precursor
gi|23297757|gb|AAN13019.1| unknown protein [Arabidopsis thaliana]
gi|332191516|gb|AEE29637.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 487
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 104 DRG---VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
D+G + C+ +L LM H + WVFN PVD L + DY +I+ +PMDLGTVKT+L +
Sbjct: 126 DKGTVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGK 185
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
+LY +F DVRLTF+NA+LYNP ++V++ A+ L N+F+ KW S+E ++
Sbjct: 186 SLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSIEMQY 237
>gi|9665057|gb|AAF97259.1|AC034106_2 Contains similarity to female sterile homeotic-related protein
Frg-1 from Mus musculus gb|AF045462 and contains a
bromodomain PF|00439 [Arabidopsis thaliana]
Length = 440
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 104 DRG---VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
D+G + C+ +L LM H + WVFN PVD L + DY +I+ +PMDLGTVKT+L +
Sbjct: 126 DKGTVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGK 185
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
+LY +F DVRLTF+NA+LYNP ++V++ A+ L N+F+ KW S+E ++
Sbjct: 186 SLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSIEMQY 237
>gi|42407711|dbj|BAD08859.1| putative bromodomain-containing protein [Oryza sativa Japonica
Group]
gi|125602058|gb|EAZ41383.1| hypothetical protein OsJ_25901 [Oryza sativa Japonica Group]
Length = 791
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 71/105 (67%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK+L H F PVD V+L+IPDYF II KPMDLGT++ +L+ +YS +F
Sbjct: 165 QCGNLLKNLFKHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTIEKKLNAGMYSTPWDF 224
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSS 214
ADVRLTF NA+ YNP N+V+ M + L +F+ +WK +E+K S
Sbjct: 225 AADVRLTFDNAVTYNPVGNDVNLMGKTLKCIFETRWKFIEKKLPS 269
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 121/200 (60%), Gaps = 13/200 (6%)
Query: 408 SAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERL 467
SAE+ + + Q+ P K RAA+L +RFADTI KA+++TL D K DP KLQ + E L
Sbjct: 592 SAEDEGENVSEKQVPPAKQYRAAVLLNRFADTIFKAREKTL-DQVAKKDPEKLQHDMEEL 650
Query: 468 EQRQREEKARIEAQIKAAE-------AASRMKAEIELKKQREKEREAARVALQKMERTVE 520
E+ +REE+ARI+A+ KAAE AA+ +A E K+QRE+EREAAR ALQ+ME+TV+
Sbjct: 651 ERLRREERARIQAEAKAAEDARKRAEAAAAAEAAAEAKRQREREREAARKALQQMEKTVD 710
Query: 521 IEHNLEILKELEMLSGCCLSPHLLN--GSEAQKRAFKEAHFK---NPLERIGLFMKSDYL 575
I LK+LEML + G + + F+ NPLE++GL+MK+D
Sbjct: 711 INEGNLFLKDLEMLGTVTSGEQFPSSVGETSPTHTPEGLGFQLGSNPLEQLGLYMKNDDE 770
Query: 576 VEDEDEEILNLDGDGEEGEI 595
++E E D EEGEI
Sbjct: 771 EDEEGESADEPTIDVEEGEI 790
>gi|125560007|gb|EAZ05455.1| hypothetical protein OsI_27669 [Oryza sativa Indica Group]
Length = 791
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 71/105 (67%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +LK+L H F PVD V+L+IPDYF II KPMDLGT++ +L+ +YS +F
Sbjct: 165 QCGNLLKNLFKHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTIEKKLNAGMYSTPWDF 224
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSS 214
ADVRLTF NA+ YNP N+V+ M + L +F+ +WK +E+K S
Sbjct: 225 AADVRLTFDNAVTYNPVGNDVNLMGKTLKCIFETRWKFIEKKLPS 269
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 121/200 (60%), Gaps = 13/200 (6%)
Query: 408 SAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERL 467
SAE+ + + Q+ P K RAA+L +RFADTI KA+++TL D K DP KLQ + E L
Sbjct: 592 SAEDEGENVSEKQVPPAKQYRAAVLLNRFADTIFKAREKTL-DQVAKKDPEKLQHDMEEL 650
Query: 468 EQRQREEKARIEAQIKAAE-------AASRMKAEIELKKQREKEREAARVALQKMERTVE 520
E+ +REE+ARI+A+ KAAE AA+ +A E K+QRE+EREAAR ALQ+ME+TV+
Sbjct: 651 ERLRREERARIQAEAKAAEDARKRAEAAAAAEAAAEAKRQREREREAARKALQQMEKTVD 710
Query: 521 IEHNLEILKELEMLSGCCLSPHLLN--GSEAQKRAFKEAHFK---NPLERIGLFMKSDYL 575
I LK+LEML + G + + F+ NPLE++GL+MK+D
Sbjct: 711 INEGNLFLKDLEMLGTVTSGEQFPSSVGETSPTHTPEGLGFQLGSNPLEQLGLYMKNDDE 770
Query: 576 VEDEDEEILNLDGDGEEGEI 595
++E E D EEGEI
Sbjct: 771 EDEEGESADEPTIDVEEGEI 790
>gi|255567054|ref|XP_002524509.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223536183|gb|EEF37836.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 553
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%)
Query: 104 DRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
+R V +C +L+ LM H GWVFN+PVD KL + DYF II PMDLGTVK+RL +N Y
Sbjct: 209 NREVFKKCEDLLEKLMKHQYGWVFNKPVDVKKLKLHDYFKIIKHPMDLGTVKSRLKKNWY 268
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
EF DV+LTF+NAM YN + H MA L LF+ W +E
Sbjct: 269 KSPKEFAEDVKLTFNNAMKYNDKGQDAHIMADVLLKLFEEHWAIIE 314
>gi|348686369|gb|EGZ26184.1| hypothetical protein PHYSODRAFT_483048 [Phytophthora sojae]
Length = 2258
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
VILK +M H GWVFN PVDPV L+IP+YF II KPMDLGTVK +L+ +Y +DEF +
Sbjct: 1274 VILKGMMDHKFGWVFNTPVDPVALNIPNYFKIIRKPMDLGTVKKKLEAGIYKHTDEFANE 1333
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
VR TF NAM YN + +V+ +A+++ + F+
Sbjct: 1334 VRTTFENAMQYNSEDQDVYSLAKDMLSDFN 1363
>gi|356554832|ref|XP_003545746.1| PREDICTED: uncharacterized protein LOC100819363 [Glycine max]
Length = 529
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS +L+ LM H GWVFN PVD V L + DY II +PMDLGTVK+ L +N+Y+ +F
Sbjct: 152 CSQVLQKLMKHKHGWVFNAPVDIVGLKLHDYCDIIKQPMDLGTVKSNLSKNVYATPADFA 211
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
+DVRLTF+NA+ YNP ++V+ MA++L F+ ++ + EK+ +
Sbjct: 212 SDVRLTFNNALAYNPKGHDVYTMAEQLLARFEELYRPVHEKFEGSI 257
>gi|345288391|gb|AEN80687.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288393|gb|AEN80688.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288395|gb|AEN80689.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288397|gb|AEN80690.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288399|gb|AEN80691.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288401|gb|AEN80692.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288403|gb|AEN80693.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288405|gb|AEN80694.1| AT1G06230-like protein, partial [Capsella rubella]
Length = 197
Score = 112 bits (281), Expect = 4e-22, Method: Composition-based stats.
Identities = 52/99 (52%), Positives = 65/99 (65%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V CS +L+ LM H GWVFN PVD L + DYF+II PMDLGT+K+ L +N+Y
Sbjct: 98 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSP 157
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF DVRLTF NAM YNP +VH MA+ L +F+ +W
Sbjct: 158 REFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERW 196
>gi|15810439|gb|AAL07107.1| unknown protein [Arabidopsis thaliana]
Length = 487
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 104 DRG---VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
D+G + C+ +L LM H + WVFN PVD L + DY +I+ +PMDLGTVK +L +
Sbjct: 126 DKGTVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKIKLGK 185
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
+LY +F DVRLTF+NA+LYNP ++V++ A+ L N+F+ KW S+E ++
Sbjct: 186 SLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSIEMQY 237
>gi|356554838|ref|XP_003545749.1| PREDICTED: transcription factor GTE11-like [Glycine max]
Length = 536
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 71/106 (66%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS +L+ LM H GW+FN PVD V L + DY+ +I +PMDLGTVK+ L N Y+ +F
Sbjct: 158 CSQVLQKLMKHKHGWIFNAPVDVVGLQLTDYYDVIKQPMDLGTVKSNLSMNKYTTPSDFA 217
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
+DVRLTF+NA+ YNP ++V+ +A+ L F+ ++ L EK+ V
Sbjct: 218 SDVRLTFNNALAYNPKGHDVYTVAELLLTRFEELYRPLHEKFEGSV 263
>gi|224116690|ref|XP_002317367.1| global transcription factor group [Populus trichocarpa]
gi|222860432|gb|EEE97979.1| global transcription factor group [Populus trichocarpa]
Length = 347
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 65/108 (60%)
Query: 102 KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
+ + + +C +L LM H GWVFN PVD L + DYF II PMDLGTVK+RL +N
Sbjct: 71 RFSKYLVKECGELLGKLMKHQYGWVFNVPVDVKMLKLHDYFKIIKHPMDLGTVKSRLSKN 130
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
Y EF DVRLTF+NAM YN +VH MA L +F+ W + +
Sbjct: 131 WYKSPKEFAEDVRLTFNNAMKYNEKGQDVHTMADTLLKIFEENWANFK 178
>gi|57282320|emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
Length = 617
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 40 VENWRHSSSVAESNQLMMSKPY------RSSGGKKMIASEHSKERSSIL-PFNKRQAQEV 92
+E R+ ES QL S P + SG K+ S SK+R +L + R
Sbjct: 119 LEQIRNLKDRIESGQLSTSNPRSHGKSKKLSGNKRPTPSGSSKDRKKLLNGVDNRNFGNP 178
Query: 93 IEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLG 152
G K + +C +L LM H +GW+FN PVD + + DY II +PMDLG
Sbjct: 179 GGGGGVKGIIGMENMMKECRQVLAKLMKHKSGWIFNTPVDAKAMGLHDYHQIIKRPMDLG 238
Query: 153 TVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
TVK+ L N Y EF ADVRLTF+NA+LYNP + VH A++L F+ ++ +++K
Sbjct: 239 TVKSNLINNFYPTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFEDMFRPIQDK 297
>gi|397609097|gb|EJK60217.1| hypothetical protein THAOC_19472 [Thalassiosira oceanica]
Length = 1735
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 66/99 (66%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C ILKSL H GWVF+ PV+PV+L + DYF II KPMDLGT+ +L++ Y DEF
Sbjct: 860 KCGEILKSLQNHENGWVFSTPVNPVELGLDDYFDIIKKPMDLGTIGKKLEQGSYHSFDEF 919
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+DVRLTF NAM YN + VH+MA+ FD +K +
Sbjct: 920 KSDVRLTFENAMKYNEEQTVVHEMAKGFKKKFDEDYKKM 958
>gi|57282318|emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana
benthamiana]
Length = 613
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 66/102 (64%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C +L LM H +GW+FN PVD L + DY II +PMDLGTVK+ L NLY EF
Sbjct: 195 ECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYRQIIKRPMDLGTVKSNLSNNLYPTPFEF 254
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
ADVRLTF+NA+LYNP + VH A+ L F+ ++ ++K
Sbjct: 255 AADVRLTFNNALLYNPKTDQVHVFAELLLTRFEDMFRPFQDK 296
>gi|449459556|ref|XP_004147512.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
gi|449511376|ref|XP_004163939.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
Length = 533
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Query: 99 KRPKMDRG-VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTR 157
KR D G + CS IL LM H GW+FN+PVD V + + DY+ I+ +PMDLG+VK +
Sbjct: 156 KRSNSDNGNLLKACSQILTKLMKHKHGWIFNKPVDVVGMGLHDYYDIVKRPMDLGSVKVK 215
Query: 158 LDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
L ++ Y +F +DVRLTF NAM YNP ++VH MA++L F+ ++ + E E
Sbjct: 216 LGKDAYESPYDFASDVRLTFKNAMTYNPKGHDVHAMAEQLLVRFEELFRPVAEALEEE 273
>gi|428176256|gb|EKX45141.1| hypothetical protein GUITHDRAFT_108789 [Guillardia theta CCMP2712]
Length = 220
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 101 PKMDR-GVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLD 159
P+M + G +C ILK L HP WVFN PVD KL +PDY +I +PMDLGTVK+ L+
Sbjct: 6 PQMSKPGWVKKCGNILKQLSAHPNSWVFNEPVDAEKLGLPDYHIVIKRPMDLGTVKSNLE 65
Query: 160 RNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+ + + +F DV L F NAM YNP ++VH MA+ L LF+ KW
Sbjct: 66 KGVLANPQQFKDDVLLVFRNAMTYNPEGHDVHVMAKTLKVLFEGKW 111
>gi|167515986|ref|XP_001742334.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778958|gb|EDQ92572.1| predicted protein [Monosiga brevicollis MX1]
Length = 497
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Query: 82 LPFNKRQAQEVIEGPKDKR-PKMDRGVTHQ--CSVILKSLM--MHPA-GWVFNRPVDPVK 135
LP ++RQ+ VI PKD R H C I+K L H A W F PVD VK
Sbjct: 218 LPTHRRQSSRVIRAPKDGLLAASSRLPAHMRVCYDIIKDLFGKKHQAYAWPFYEPVDIVK 277
Query: 136 LDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQ 195
L+IPDY+ +I +PMDLGTV+T+L+ Y D+F DVRL F+N YNPP ++V KMA+
Sbjct: 278 LNIPDYYDVIKQPMDLGTVRTKLEEGEYETRDDFAHDVRLVFANCYTYNPPGSDVVKMAK 337
Query: 196 ELNNLFDIKW 205
+ +F+++W
Sbjct: 338 STSEVFELQW 347
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 102 KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
+M + + VIL +L HP+ W F +PVD KL + Y II+ PMDLGT++ +L +
Sbjct: 81 RMTNQLQYISKVILPTLNKHPSAWPFKKPVDWKKLGLLSYPEIIANPMDLGTIRNKLRKK 140
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQEL 197
Y E + D+ L + N +N P ++V+ M+Q L
Sbjct: 141 EYFSGRECLDDIELVWHNCQTFNRPSDDVYIMSQAL 176
>gi|350539095|ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding protein Virp1a [Solanum lycopersicum]
gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding protein Virp1b [Solanum lycopersicum]
gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding protein Virp1c [Solanum lycopersicum]
gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186134|emb|CAC33449.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186138|emb|CAC33451.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
Length = 602
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C IL LM H GW+FN PVD L + DY II +PMDLGTVK+ L +N Y EF
Sbjct: 195 ECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPMDLGTVKSNLAKNFYPSPFEF 254
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
ADVRLTF+NA+LYNP + V+ A++L F+ ++ L++K
Sbjct: 255 AADVRLTFNNALLYNPKTDQVNAFAEQLLGRFEDMFRPLQDK 296
>gi|260943750|ref|XP_002616173.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
gi|238849822|gb|EEQ39286.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
Length = 613
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 71/117 (60%), Gaps = 5/117 (4%)
Query: 94 EGPKDKRPKMDRGVTHQ--CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKP 148
E P D RP+ + C+ ++K LM + + F +PVDPV L+IP+YF I+ +P
Sbjct: 268 ELPYDVRPRKKKYAVELRFCNQVIKELMSKKFYSINFPFLQPVDPVALNIPNYFDIVKEP 327
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
MDLG+++T+L N Y DEF DVRL F N L+NP N+VH M Q L +FD KW
Sbjct: 328 MDLGSIQTKLANNQYENGDEFEKDVRLVFKNCYLFNPEGNDVHSMGQRLEQVFDKKW 384
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 109 HQCSVILKSL----MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYS 164
HQ +L ++ + AG F PVD VKL++P Y++ I +PMDL T++ +L+ N Y
Sbjct: 118 HQAKFVLNTIKAIKRLRDAGP-FLHPVDVVKLNVPLYYNYIKRPMDLSTIERKLNLNAYE 176
Query: 165 VSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+ V D L SN + +N + + +MA+ + F+
Sbjct: 177 DPSQVVDDFNLMVSNCLRFNGENSGISRMAKNIQAQFE 214
>gi|356549487|ref|XP_003543125.1| PREDICTED: uncharacterized protein LOC100802622 [Glycine max]
Length = 531
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 72/106 (67%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS +L+ L+ H GWVF PVD V L + DY II +PMDLGTVK+ L +N+Y+ +F
Sbjct: 155 CSQVLQKLIKHKHGWVFKAPVDVVGLKLHDYCDIIKQPMDLGTVKSNLSKNVYATPADFA 214
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
+DVRLTF+NA+ YNP ++V+ MA++L F+ ++ + EK+ +
Sbjct: 215 SDVRLTFNNALAYNPKGHDVYTMAEQLLARFEELYRPVHEKFEGSI 260
>gi|357476123|ref|XP_003608347.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509402|gb|AES90544.1| Bromodomain-containing protein [Medicago truncatula]
Length = 390
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 69/102 (67%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C IL+ LM GW+F+ PVDPV L++ DYF II PMDLGTVK++L +N YS EF
Sbjct: 152 CGQILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEFA 211
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
DV+LTF NA+ YNP ++V+ A +L F+ ++ ++EK+
Sbjct: 212 DDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKF 253
>gi|359475584|ref|XP_003631709.1| PREDICTED: transcription factor GTE2-like [Vitis vinifera]
Length = 561
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 67/104 (64%), Gaps = 4/104 (3%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C L LM H WVFN PVD V + + DY II +PMDLGTVK+++ +NLY +F
Sbjct: 174 CGQTLTKLMKHKHSWVFNSPVDVVGMGLHDYHQIIKRPMDLGTVKSKIAKNLYDSPLDFA 233
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQEL----NNLFDIKWKSLEE 210
ADVRLTF NA+LYNP ++VH MA++L +LF + LEE
Sbjct: 234 ADVRLTFDNALLYNPKGHDVHVMAEQLLARFEDLFKPVYNKLEE 277
>gi|296088086|emb|CBI35445.3| unnamed protein product [Vitis vinifera]
Length = 564
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 67/104 (64%), Gaps = 4/104 (3%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C L LM H WVFN PVD V + + DY II +PMDLGTVK+++ +NLY +F
Sbjct: 186 CGQTLTKLMKHKHSWVFNSPVDVVGMGLHDYHQIIKRPMDLGTVKSKIAKNLYDSPLDFA 245
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQEL----NNLFDIKWKSLEE 210
ADVRLTF NA+LYNP ++VH MA++L +LF + LEE
Sbjct: 246 ADVRLTFDNALLYNPKGHDVHVMAEQLLARFEDLFKPVYNKLEE 289
>gi|42568797|ref|NP_201366.3| global transcription factor group E7 [Arabidopsis thaliana]
gi|75146221|sp|Q7Y214.1|GTE7_ARATH RecName: Full=Transcription factor GTE7; AltName:
Full=Bromodomain-containing protein GTE7; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E7
gi|30793995|gb|AAP40447.1| unknown protein [Arabidopsis thaliana]
gi|110742049|dbj|BAE98957.1| hypothetical protein [Arabidopsis thaliana]
gi|133778882|gb|ABO38781.1| At5g65630 [Arabidopsis thaliana]
gi|332010696|gb|AED98079.1| global transcription factor group E7 [Arabidopsis thaliana]
Length = 590
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 95 GPKD-KRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGT 153
GP D + K+ G+ + CS IL LM H WVFN PVD V L + DY ++ KPMDLGT
Sbjct: 156 GPSDPESEKLLAGMLNTCSQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGT 215
Query: 154 VKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
VK LD+ Y +F DVRLTF NAM YNP +V+ MA +L + FD
Sbjct: 216 VKLNLDKGFYVSPIDFATDVRLTFDNAMTYNPKGQDVYFMADKLLDHFD 264
>gi|112292667|gb|ABI14812.1| chloroplast bromodomain-containing protein [Pachysandra terminalis]
Length = 428
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 76/134 (56%), Gaps = 18/134 (13%)
Query: 102 KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
KM + QC IL LM H GW+FN PVD V + + DY II PMDLGTVK + +N
Sbjct: 31 KMLSSMMKQCGQILTKLMRHKHGWIFNVPVDVVGMGLHDYNQIIKHPMDLGTVKLNIGKN 90
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQEL----NNLFDIKWKSLEE------- 210
LYS +F +DVRLTF+NA+ YNP ++V+ MA++L +F+ +K E+
Sbjct: 91 LYSSPLDFASDVRLTFNNALSYNPKGHDVYAMAEQLLVRFEEMFEPAYKKFEDAQQRKIS 150
Query: 211 -------KWSSEVP 217
WS ++P
Sbjct: 151 AGEIRRSSWSHQIP 164
>gi|302834497|ref|XP_002948811.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
gi|300266002|gb|EFJ50191.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
Length = 767
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 79 SSILPFNKRQAQEV-IEGPKDKRPKMD-------RGVTHQCSVILKSLMMHPAGWVFNRP 130
+S P KR +Q GP KRPK+D + + C +L LM VF RP
Sbjct: 61 ASKQPAAKRSSQPASFTGPDPKRPKLDSETDKKIQDIWRMCGAVLDFLMKKKNAIVFLRP 120
Query: 131 VDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNV 190
VDPVK +PDYF I PMDLGT+KTRL YS EF ADVRL + N YN V
Sbjct: 121 VDPVKDGVPDYFKFICHPMDLGTIKTRLRERKYSDPREFAADVRLVWRNCATYNAVGTPV 180
Query: 191 HKMAQELNNLFDIKWKSL--EEKWSSEV 216
M +L+ ++ KW L E++W + V
Sbjct: 181 RIMGDQLSEDWERKWAELNVEQRWDALV 208
>gi|357476121|ref|XP_003608346.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509401|gb|AES90543.1| Bromodomain-containing protein [Medicago truncatula]
Length = 518
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 69/102 (67%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C IL+ LM GW+F+ PVDPV L++ DYF II PMDLGTVK++L +N YS EF
Sbjct: 152 CGQILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEFA 211
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
DV+LTF NA+ YNP ++V+ A +L F+ ++ ++EK+
Sbjct: 212 DDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKF 253
>gi|57282322|emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
Length = 616
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C+ +L LM H +GW+FN PVD L + DY II +P DLGT K+ L N Y EF
Sbjct: 195 ECTQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPXDLGTXKSNLSNNFYPTPFEF 254
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
ADVRLTF+NA+LYNP + VH A++L F+ ++ +++K
Sbjct: 255 AADVRLTFNNALLYNPKTDQVHGFAEQLLARFEDMFRPIQDK 296
>gi|296421346|ref|XP_002840226.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636440|emb|CAZ84417.1| unnamed protein product [Tuber melanosporum]
Length = 825
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 111 CSVILKSL---MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ++LK L H + F PVDPV L+IPDYF II KPMDL T+ T+L N Y +
Sbjct: 464 CDIVLKELHKKQYHDTAFPFYVPVDPVALNIPDYFKIIKKPMDLSTISTKLKTNQYDSAS 523
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+F AD+RL FSN +NP + +VHK + L N+FD KW
Sbjct: 524 DFEADIRLMFSNCYKFNPSDQHVHKCGKALENIFDQKW 561
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 56/90 (62%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+++SL F PVDP+KL++P+YF +I+ PMDL T++ +L+ YS S +F+AD
Sbjct: 251 VVIRSLRRTKDARPFTMPVDPIKLNVPNYFEVITNPMDLQTMEKKLNNKEYSSSRDFLAD 310
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
L +N + +N E+ V + + + +F+
Sbjct: 311 FNLILTNCVTFNGREHPVSENGRVMKAVFE 340
>gi|8978291|dbj|BAA98182.1| unnamed protein product [Arabidopsis thaliana]
Length = 643
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 95 GPKD-KRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGT 153
GP D + K+ G+ + CS IL LM H WVFN PVD V L + DY ++ KPMDLGT
Sbjct: 211 GPSDPESEKLLAGMLNTCSQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGT 270
Query: 154 VKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
VK LD+ Y +F DVRLTF NAM YNP +V+ MA +L + FD
Sbjct: 271 VKLNLDKGFYVSPIDFATDVRLTFDNAMTYNPKGQDVYFMADKLLDHFD 319
>gi|224013794|ref|XP_002296561.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968913|gb|EED87257.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 89
Score = 107 bits (268), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/88 (56%), Positives = 60/88 (68%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+LK L H GWVFN PVDPV+L +PDYF +I PMDLGTVK RL+ LY +E D+
Sbjct: 2 LLKGLSNHNHGWVFNSPVDPVELGLPDYFEVIKNPMDLGTVKKRLENGLYRSINEVEVDI 61
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLF 201
LTF NAMLYNP + V MA+EL + F
Sbjct: 62 NLTFDNAMLYNPEGSVVWSMAKELKDKF 89
>gi|57282314|emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
Length = 602
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 67/102 (65%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C IL LM H GW+FN PVD L + DY II +P+DLGTVK+ L +N Y EF
Sbjct: 195 ECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPIDLGTVKSNLAKNFYPSPFEF 254
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
ADVRLTF+NA+LYNP + V+ A++L F+ ++ L++K
Sbjct: 255 AADVRLTFNNALLYNPKTDQVNGFAEQLLGRFEDMFRPLQDK 296
>gi|301112310|ref|XP_002905234.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
gi|262095564|gb|EEY53616.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
Length = 2294
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 61/83 (73%)
Query: 115 LKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVR 174
L+ +M H GWVFN PVDPV L+IP+YF I+ KPMDLGTVK +L+ +Y ++EF DVR
Sbjct: 1303 LRGMMEHKFGWVFNTPVDPVALNIPNYFKIVRKPMDLGTVKKKLELGIYKHTEEFAYDVR 1362
Query: 175 LTFSNAMLYNPPENNVHKMAQEL 197
TF NAM YN + +V+ +A+++
Sbjct: 1363 TTFQNAMQYNSEDQDVYSLAKDM 1385
>gi|224056335|ref|XP_002298808.1| global transcription factor group [Populus trichocarpa]
gi|222846066|gb|EEE83613.1| global transcription factor group [Populus trichocarpa]
Length = 474
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 68/101 (67%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS IL LM H G++FN PVD V + + DY II PMDLGTVK++L +NLY +F
Sbjct: 177 CSQILSKLMKHKLGYIFNSPVDVVGMQLHDYHDIIKSPMDLGTVKSKLTKNLYESPRDFA 236
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
ADVRLTF+NAM YNP + V+ +A++ F+ ++ ++EK
Sbjct: 237 ADVRLTFNNAMKYNPKGHEVYMLAEQFLTRFEDFYRPIKEK 277
>gi|297789895|ref|XP_002862870.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
gi|297308629|gb|EFH39129.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 63/101 (62%)
Query: 102 KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
K+ G+ + C IL LM H WVFN PVD V L + DY ++ KPMDLGTVK LD+
Sbjct: 164 KLLAGMLNTCGQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKG 223
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
Y +F DVRLTF+NAM YNP +V+ MA +L + FD
Sbjct: 224 FYVSPIDFATDVRLTFNNAMTYNPKGQDVYFMADKLLDHFD 264
>gi|57282316|emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana
benthamiana]
Length = 615
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 66/102 (64%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C +L LM H +GW+FN PVD L + DY II +PMDLGTVK+ L Y EF
Sbjct: 195 ECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPMDLGTVKSNLSNCFYPTPFEF 254
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
ADVRLTF+NA+LYNP + VH A++L F+ ++ +++K
Sbjct: 255 AADVRLTFNNALLYNPKTDQVHGFAEQLLARFEDMFRPIQDK 296
>gi|219118433|ref|XP_002179989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408246|gb|EEC48180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1603
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 66/101 (65%)
Query: 115 LKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVR 174
LK+L H WVFN PVDPV+L +PDYF +I KPMDLGT++ +L+ +Y D+F V
Sbjct: 582 LKTLQSHQHAWVFNTPVDPVELGLPDYFEVIKKPMDLGTIRKKLENGVYQRLDDFKEHVL 641
Query: 175 LTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
LTF NAM+YNP + V+ MA E+ F + L E+ ++E
Sbjct: 642 LTFDNAMMYNPEGSVVYNMANEMKVKFQSDFVKLMEQLNAE 682
>gi|297797597|ref|XP_002866683.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
gi|297312518|gb|EFH42942.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
Length = 577
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 63/101 (62%)
Query: 102 KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
K+ G+ + C IL LM H WVFN PVD V L + DY ++ KPMDLGTVK LD+
Sbjct: 164 KLLAGMLNTCGQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKG 223
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
Y +F DVRLTF+NAM YNP +V+ MA +L + FD
Sbjct: 224 FYVSPIDFATDVRLTFNNAMTYNPKGQDVYFMADKLLDHFD 264
>gi|330792873|ref|XP_003284511.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
gi|325085541|gb|EGC38946.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
Length = 1321
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 61/99 (61%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V +CS +L LM HP F PVDP L I DYF+ I +PMD GT+K + +Y
Sbjct: 647 VFKRCSDLLDELMEHPQAGPFLVPVDPYALGILDYFNFIKRPMDFGTIKNSIVGGVYHTI 706
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
DEF DVRL FSNA YNPP N VH MA+ L +LF+ K+
Sbjct: 707 DEFAEDVRLVFSNAKAYNPPANLVHIMAKTLEDLFEEKF 745
>gi|219118718|ref|XP_002180126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408383|gb|EEC48317.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1056
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 62/88 (70%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C +LK LM H GWVFN PVDPV+L + DYF II KPMDLGT++ RL+ + Y D+F
Sbjct: 178 KCLDVLKGLMAHQHGWVFNGPVDPVELGLVDYFEIIKKPMDLGTIQKRLESSAYHSIDDF 237
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQEL 197
D+ LTF NAM+YN + V+ MA++L
Sbjct: 238 KTDIFLTFENAMVYNEDGSVVYDMAKQL 265
>gi|348690450|gb|EGZ30264.1| hypothetical protein PHYSODRAFT_310264 [Phytophthora sojae]
Length = 1333
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 65/105 (61%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C ILK LM +P F PVDPV L IPDYF +I +PMDLGT+++ L+ Y F
Sbjct: 335 KCLSILKGLMSNPKSAPFLVPVDPVALGIPDYFHVIKEPMDLGTIRSNLETGFYDTPSAF 394
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSS 214
VRL F NAMLYN + VH A++L + F+ ++KSL K S+
Sbjct: 395 AEHVRLVFRNAMLYNAAHSQVHIYARKLMDDFERRFKSLNVKLST 439
>gi|428180935|gb|EKX49800.1| hypothetical protein GUITHDRAFT_67457 [Guillardia theta CCMP2712]
Length = 117
Score = 105 bits (263), Expect = 5e-20, Method: Composition-based stats.
Identities = 51/91 (56%), Positives = 62/91 (68%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C ILK L H GWVF+ PVDPVKL+IPDY II KPMDLGTV+T LD + +EF
Sbjct: 11 KCIGILKVLKNHKHGWVFSEPVDPVKLNIPDYLEIIKKPMDLGTVRTHLDNGTITNPEEF 70
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNL 200
+V LTF NAM YNP ++VH MA+ L +
Sbjct: 71 KTNVVLTFDNAMRYNPSNHDVHIMAKTLKEV 101
>gi|226495673|ref|NP_001142282.1| uncharacterized protein LOC100274451 [Zea mays]
gi|194707994|gb|ACF88081.1| unknown [Zea mays]
Length = 350
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 60/91 (65%)
Query: 119 MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFS 178
M H WVFN PVD L + DY +II+KPMDLGTVK++L Y EF DVRLTF
Sbjct: 1 MKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSKLAAGQYRSPREFAGDVRLTFR 60
Query: 179 NAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
NAM YNP +VH MA++L N+F+ KW +E
Sbjct: 61 NAMTYNPKGQDVHFMAEQLLNMFEEKWLEIE 91
>gi|224007327|ref|XP_002292623.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
gi|220971485|gb|EED89819.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
Length = 865
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Query: 71 ASEHSKERSSILP-FNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNR 129
AS +++ +SILP + Q+ +E R +T +C +++ L H GWVF
Sbjct: 13 ASSVAQKVTSILPSMSIAAIQQHVESLASNGQLTPRLITRKCLPLVRKLYNHEHGWVFKD 72
Query: 130 PVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENN 189
PVDPV+L IPDYF I+ PMDL V+T+L+ +Y D F D +L F NA+L+N +N+
Sbjct: 73 PVDPVELGIPDYFDIVQHPMDLALVETKLENGVYKDLDSFERDTKLVFENAILFNGEKND 132
Query: 190 VHKMAQELNNLFDIKWKSL 208
V MA++L +FD K++
Sbjct: 133 VGGMAKQLLFMFDEDLKAV 151
>gi|255084403|ref|XP_002508776.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226524053|gb|ACO70034.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 852
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 64 SGGKKMIASEHSKER-SSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHP 122
SGGK+ + +++ +++ +AQE IEG + R K + +C L S+ H
Sbjct: 213 SGGKRQMKKVAKRDKKGNVITHRMLKAQE-IEGIRAIRHK---ALMKECRECLSSVRKHK 268
Query: 123 AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR-----NLYSVSDEFVADVRLTF 177
W FN+PVDP+ L IPDYF II PMD GT+K +LD+ YS EF D+RL F
Sbjct: 269 YAWAFNKPVDPIALHIPDYFDIIKNPMDFGTIKEKLDKKSQQNGAYSGPQEFADDMRLVF 328
Query: 178 SNAMLYNPPENNVHKMAQELNNLFDIKW 205
N LYN P+++ M L F+ W
Sbjct: 329 DNCALYNTPDSDAGLMGSTLQQEFEKAW 356
>gi|224103835|ref|XP_002313212.1| global transcription factor group [Populus trichocarpa]
gi|222849620|gb|EEE87167.1| global transcription factor group [Populus trichocarpa]
Length = 224
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 65/101 (64%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS IL LM G++FN PVD V L + DY II PMDLGTVKT L +NLY +F
Sbjct: 5 CSQILSKLMKQKLGYIFNTPVDVVGLQLHDYHDIIKNPMDLGTVKTNLSKNLYESPRDFA 64
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
ADVRLTF+NAM YNP + V+ +A++ F ++ ++EK
Sbjct: 65 ADVRLTFNNAMKYNPKGHEVYILAEQFLTRFQDLYRPIKEK 105
>gi|440294998|gb|ELP87938.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 364
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 61/93 (65%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
I + LM P G FN PVDP L IP YFS+I PMDLGT+K L Y +EF DV
Sbjct: 91 INRKLMTQPEGIAFNVPVDPDALQIPTYFSVIKSPMDLGTIKKNLSDKKYLTKEEFYKDV 150
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
+LTF+NA ++N P+++V+K A +L+ +FD WK
Sbjct: 151 KLTFNNAKVFNHPDSDVYKWAVKLDKMFDGFWK 183
>gi|145353027|ref|XP_001420833.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581068|gb|ABO99126.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 904
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 73/122 (59%), Gaps = 4/122 (3%)
Query: 100 RPKMDRGVTHQCSV--ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTR 157
RPK R T + I +SLM+H ++F RPVDPV +IPDYF +I PMDLGT+K R
Sbjct: 404 RPKGGRVATPLTRIKSIHRSLMVHKNAYIFLRPVDPVYWEIPDYFEVIKNPMDLGTIKER 463
Query: 158 LDRNLYSVSD--EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
+D Y + + ADVRL +SNAM YN + V KMA+ ++ F+ +W++ E
Sbjct: 464 IDAGYYDEKNVEAYAADVRLVWSNAMTYNKDDTPVFKMARIMSREFEYQWQTRIEDEEFV 523
Query: 216 VP 217
VP
Sbjct: 524 VP 525
>gi|255554567|ref|XP_002518322.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223542542|gb|EEF44082.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 634
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 68/107 (63%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C +L LM H G++FN PVD ++++ DYF II KPMDLGTVK +L N Y +F
Sbjct: 236 KCGQMLTKLMKHKFGYIFNEPVDVERMNLHDYFEIIKKPMDLGTVKKKLGSNEYESPIDF 295
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
ADVRLTF+NAM YNP + V+ A++ + F+ ++ + EK V
Sbjct: 296 AADVRLTFNNAMKYNPKGHEVYTFAEQFLSRFEELFRPIREKLGDFV 342
>gi|327488240|sp|Q9LXA7.2|GTE2_ARATH RecName: Full=Transcription factor GTE2; AltName:
Full=Bromodomain-containing protein GTE2; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E2
Length = 581
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C IL LM H WVF PVD V L + DY I+ KPMDLGTVK L++ LY +F
Sbjct: 178 CGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPIDFA 237
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+DVRLTF+NAM YNP +V+ MA++L + FD+ W
Sbjct: 238 SDVRLTFTNAMSYNPKGQDVYLMAEKLLSQFDV-W 271
>gi|440293863|gb|ELP86910.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 358
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 105 RGVTHQ---CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
R ++H+ C ILK+L P F PVDP+ ++PDY+ +I++PMDLGT+ +L
Sbjct: 142 RPLSHEVLPCKDILKTLKNLPEANPFLSPVDPIAQNLPDYYIVITEPMDLGTITKKLRMG 201
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+Y D+F ADVRLTF NAM YNPP N VH A+ L FD K K L
Sbjct: 202 VYDHIDDFAADVRLTFKNAMKYNPPRNMVHVFAKTLLKYFDDKIKEL 248
>gi|15238195|ref|NP_196617.1| global transcription factor group E2 [Arabidopsis thaliana]
gi|7671448|emb|CAB89388.1| bromodomain protein-like [Arabidopsis thaliana]
gi|332004179|gb|AED91562.1| global transcription factor group E2 [Arabidopsis thaliana]
Length = 678
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Query: 102 KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
K+ + + C IL LM H WVF PVD V L + DY I+ KPMDLGTVK L++
Sbjct: 244 KVLKSMMTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKG 303
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
LY +F +DVRLTF+NAM YNP +V+ MA++L + FD+ W
Sbjct: 304 LYRSPIDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQFDV-W 346
>gi|63054449|ref|NP_588301.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe
972h-]
gi|46397302|sp|Q9Y7N0.1|BDF1_SCHPO RecName: Full=SWR1 complex bromodomain subunit bdf1
gi|157310522|emb|CAB41059.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe]
Length = 578
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS +LK L + F +PVDPV D PDYF +I +PMDL T++++L++N YS +
Sbjct: 260 CSTVLKELYKRQYESFAFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNEYSTLE 319
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
EF +D+ L F+N YNPP VH M ++L N+F KW++
Sbjct: 320 EFESDILLMFNNCFTYNPPGTPVHVMGRQLENVFKEKWEA 359
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C I++ L F PVDP+K +IPDY +I+ PMDLGT++ +L YSV EF+
Sbjct: 93 CLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQEFI 152
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
D+ L FSN LYN E+ V M + L +F+ + K L
Sbjct: 153 DDMNLMFSNCFLYNGTESPVGSMGKALQEVFERQLKQL 190
>gi|449530837|ref|XP_004172398.1| PREDICTED: transcription factor GTE8-like, partial [Cucumis
sativus]
Length = 219
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 19/209 (9%)
Query: 401 PPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKL 460
P +T+S ++ + +SP++ RAA+LK+RFADTIL+A+++T+ GDK DP KL
Sbjct: 15 PSSTESDCNQDGNYTASEKPVSPERLYRAALLKNRFADTILRAKEKTMT-QGDKGDPEKL 73
Query: 461 QQEKERLEQRQREEKARIEAQIKAAEAASRMKAEIELKKQREK---EREAARVALQKMER 517
++E+E LE QR+EKAR++A+ KAA+ A R + + K +REAAR AL ++E+
Sbjct: 74 RREREELELEQRKEKARLQAEAKAAQDAQRRAEAEAAAEAKRKRELDREAARQALLQIEK 133
Query: 518 TVEIEHNLEILKELEMLSGCCLSPHLLNGSEAQKRAFKE--AHFK----NPLERIGLFMK 571
TV I+ N + L++LEML +G E ++ FK NPLE++GLF+K
Sbjct: 134 TVIIDENSQFLEDLEMLRAAPAEQLPSSGDETSPDHSQDGLGSFKFVGSNPLEQLGLFIK 193
Query: 572 SDYLVEDEDEEI-----LNLDGDGEEGEI 595
+D +EDEEI N D EEGEI
Sbjct: 194 AD----EEDEEIEPNFVSNSIKDVEEGEI 218
>gi|301118949|ref|XP_002907202.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105714|gb|EEY63766.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 786
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 74/130 (56%), Gaps = 8/130 (6%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C ILK LM +P F PVDPV L IPDYF +I +PMDLGT++ L+ Y +F
Sbjct: 279 KCLSILKGLMANPKAAPFMAPVDPVALGIPDYFHVIKEPMDLGTIRNNLESGFYDSPSDF 338
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
VRLTF NA LYN + VH A++L + F+ ++K+ + +SS+ K+ GK
Sbjct: 339 AEHVRLTFRNATLYNAAHSQVHIYARKLVDDFEKRFKT-DGTYSSK-------KVRGGKG 390
Query: 230 MEVNDTRQNC 239
+ N RQ
Sbjct: 391 TKGNTKRQTS 400
>gi|440302274|gb|ELP94596.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 307
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Query: 91 EVIEGPKDKRPK---MDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISK 147
EV+E P +PK + +C ++ L VF PVDP++ +IP Y II
Sbjct: 30 EVVEEPLPTQPKPEVLSHKDKERCQRLINDLEKTEGCEVFMEPVDPIQWNIPQYSEIIKT 89
Query: 148 PMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
PMD+GTVK +L +N Y ++FVADVRLTF NAM +NPP+N +HK A+ L +F+
Sbjct: 90 PMDIGTVKVKLHKNFYPSREDFVADVRLTFQNAMTFNPPDNPIHKNAKFLLAMFE 144
>gi|242080419|ref|XP_002444978.1| hypothetical protein SORBIDRAFT_07g002270 [Sorghum bicolor]
gi|241941328|gb|EES14473.1| hypothetical protein SORBIDRAFT_07g002270 [Sorghum bicolor]
Length = 320
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 116/184 (63%), Gaps = 18/184 (9%)
Query: 422 SPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIEAQ 481
+P K +RAA+L+SRFADTILKA+++ L D K DP KL++E+E LE+ QREE+AR++A+
Sbjct: 144 NPDKQIRAALLRSRFADTILKAREKAL-DQTTKKDPEKLRREREELERVQREERARLQAE 202
Query: 482 IKAAEAASR-------MKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELEML 534
KAAE + +A E K+QRE EREAAR ALQ+ME+TV+I LK+LEML
Sbjct: 203 AKAAEDVRKRAEAAAAAEAAAEAKRQRELEREAARKALQEMEKTVDINEGSHFLKDLEML 262
Query: 535 SGCCLSPHLLNGSEAQKRAFKEAHFKNPLERIGLFMKSDYLVED---EDEEILNLDGDGE 591
G + N F+ N LE++GL+MK+D ED DE ++++ E
Sbjct: 263 -GSVTGEQIPNLVGETSPGFEMGS--NTLEKLGLYMKNDEDDEDADFTDEPVVDV----E 315
Query: 592 EGEI 595
EGEI
Sbjct: 316 EGEI 319
>gi|414886313|tpg|DAA62327.1| TPA: hypothetical protein ZEAMMB73_683634 [Zea mays]
Length = 562
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 117/184 (63%), Gaps = 17/184 (9%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
Q+SP K +RAA+L+SRFADTILKA+++ L D+ DP KL++E+E LE+ QREE+AR++
Sbjct: 387 QVSPDKQIRAALLRSRFADTILKAREKAL----DQKDPEKLRREREELERVQREERARLQ 442
Query: 480 AQIKAAEAASR-------MKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELE 532
A+ KAAE + +A E K+QRE EREAAR ALQ+ME+TV+I LK+LE
Sbjct: 443 AEAKAAEDVRKRVEAAAAAEAAAEAKRQRELEREAARKALQEMEKTVDINEGSHFLKDLE 502
Query: 533 MLSGCCLSPHLLNGSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDEEILNLD-GDGE 591
ML G + N F+ N LE++GL+MK+D +DED + + D E
Sbjct: 503 ML-GSVTGEQIPNLVGETSPGFQMG--SNTLEKLGLYMKNDE--DDEDGDFTDEPVSDVE 557
Query: 592 EGEI 595
EGEI
Sbjct: 558 EGEI 561
>gi|407043630|gb|EKE42060.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 265
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 69/118 (58%)
Query: 89 AQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKP 148
E+ E P K ++ C ++K LM VF PVDP +IP+YF II P
Sbjct: 47 GYEIEEKPVIKNEPLNSFEKELCMSVMKQLMKVSESEVFMEPVDPEIWNIPNYFDIIKTP 106
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
MDLGTV ++ +N+Y DEF DVRLTF+NAM +NPP N VH A++L +F+ ++
Sbjct: 107 MDLGTVIKKIKKNMYYSIDEFSNDVRLTFTNAMTFNPPGNYVHSYAEKLYKIFENYYR 164
>gi|290985307|ref|XP_002675367.1| bromodomain-containing protein [Naegleria gruberi]
gi|284088963|gb|EFC42623.1| bromodomain-containing protein [Naegleria gruberi]
Length = 718
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%)
Query: 101 PKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
P + + + ++ + H W FN PVDPV+L IPDYF +I PMDLGTV+ +++
Sbjct: 177 PSLPESIQKKLQKLMGIVKKHKWSWPFNNPVDPVQLQIPDYFDVIKNPMDLGTVEKKVNN 236
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
N Y +F+ DVR+ +SN LYNP +++++KMA+E+ F+ K+
Sbjct: 237 NEYMDVYQFLDDVRVIWSNCYLYNPVDSDIYKMAKEVEKYFNEKY 281
>gi|67481051|ref|XP_655875.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56473058|gb|EAL50506.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449705918|gb|EMD45867.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 265
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 69/118 (58%)
Query: 89 AQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKP 148
E+ E P K ++ C ++K LM VF PVDP +IP+YF II P
Sbjct: 47 GYEIEEKPVIKNEPLNSFEKELCMSVMKQLMKVSESEVFMEPVDPEIWNIPNYFDIIKTP 106
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
MDLGTV ++ +N+Y DEF DVRLTF+NAM +NPP N VH A++L +F+ ++
Sbjct: 107 MDLGTVIKKIKKNMYYSIDEFSNDVRLTFTNAMTFNPPGNYVHSYAEKLYKIFENYYR 164
>gi|325187425|emb|CCA21963.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 950
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 68/112 (60%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C I+K LM + F PVDPV L IPDYF +I +PMDLGT++ L+ YS +
Sbjct: 405 KCHSIIKRLMANSKAGPFLTPVDPVALGIPDYFKVIKEPMDLGTIRQNLESGFYSDASIL 464
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGL 221
+ VRL FSNAMLYN + VH AQ+L + F + ++ K++S + ++G
Sbjct: 465 IEHVRLVFSNAMLYNAAHSQVHIFAQKLMDDFGKRIRNANIKYNSPISESGF 516
>gi|395730261|ref|XP_002810633.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific protein
[Pongo abelii]
Length = 1038
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 115/245 (46%), Gaps = 29/245 (11%)
Query: 31 CEYGQQQSHVENWRHSSSVAES---NQLMMSKPYRSSGGKKMIASEHSKERSSILPFNKR 87
C Y + NWR + AE+ + L +P R S + + SK+ LP R
Sbjct: 29 CHYNK------NWRRGT--AENCCPSLLHFVQPERGSHIRTCTCRQDSKQLRMSLP--SR 78
Query: 88 QAQEVIEGP------KDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDY 141
Q ++ P K ++ + + V+LK L H W F RPVD VKL +PDY
Sbjct: 79 QTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDY 138
Query: 142 FSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
++II PMDL T+K RL+ Y+ + E + D FSN LYN P +++ MAQ L LF
Sbjct: 139 YTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQTLEKLF 198
Query: 202 DIKWKSLEEKWSSEVPKAGLGKILSGKMMEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKA 261
K S++P+ +++ GK T+QN + +L S K+ +++A
Sbjct: 199 MQKL--------SQMPQE--EQVVGGKERIKKGTQQNIAVSSAKEKSLPSATEKVFKQQA 248
Query: 262 ARSSY 266
S +
Sbjct: 249 IPSVF 253
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 110 QCSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D Y +
Sbjct: 346 HCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYKDA 405
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 406 YKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 447
>gi|332026521|gb|EGI66642.1| Bromodomain-containing protein 2 [Acromyrmex echinatior]
Length = 1559
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L P W F +PVD L + DY II KPMDLGTVKT++D Y +
Sbjct: 455 CNDILKELFAKKHSPYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNRQYKTAH 514
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF +DVRL F+N YNPP+++V MA++L ++F++++
Sbjct: 515 EFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRY 552
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+LK + H W F +PVD KL +PDY II KPMDLGT+K RL+ + Y E + D
Sbjct: 116 VLKPVWKHQFAWPFQQPVDAKKLSLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDF 175
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPKAGLGK 223
F+N +YN P +V MAQ L LF K + E VPK GK
Sbjct: 176 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEEVVLDPPVPKGPKGK 228
>gi|24210305|emb|CAD54663.1| bromodomain containing 2 [Danio rerio]
Length = 806
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP ++ Q Q V +R K+ + + + CS ILK L+ H A W F +PVD L +
Sbjct: 356 LPDSQNQHQPV------RRGKLSQQLRY-CSTILKELLSKKHTAYAWPFYKPVDVSSLGL 408
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY+ II PMDL T+K ++D Y + +F ADVRL FSN YNPP+++V MA+ L
Sbjct: 409 HDYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQ 468
Query: 199 NLFDIKWKSLEEKWSSEVPKAGLGKILSG 227
++F+ ++ + ++ +P A LG L G
Sbjct: 469 DVFEFRFAKMPDEPLESLPPASLGGGLGG 497
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K+L H W F+ PVD KL++PDY++II +PMD+GT+K RL+ N Y + E + D
Sbjct: 73 LVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDF 132
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIK---WKSLEEKWSSEVPKAGLGKILSGKMM 230
F+N +YN P +++ MAQ L F K +EE+ + VP+ K G+ +
Sbjct: 133 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPEVEEEIPAPVPRGKQSKPKKGQKL 192
>gi|322801602|gb|EFZ22243.1| hypothetical protein SINV_03245 [Solenopsis invicta]
Length = 877
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L P W F +PVD L + DY II KPMDLGTVKT++D Y +
Sbjct: 396 CNDILKELFAKKHSPYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKTKMDNRQYKTAH 455
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF +DVRL F+N YNPP+++V MA++L ++F++++
Sbjct: 456 EFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRY 493
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+LK + H W F +PVD KL++PDY II KPMDLGT+K RL+ + Y E + D
Sbjct: 60 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDF 119
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPKAGLGK 223
F+N +YN P +V MAQ L LF K + E + VPK GK
Sbjct: 120 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEEVELDPPVPKGPKGK 172
>gi|323448819|gb|EGB04713.1| hypothetical protein AURANDRAFT_17164, partial [Aureococcus
anophagefferens]
Length = 88
Score = 100 bits (248), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 64/88 (72%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+LK L+ H W+F +PVDPV+L++PDYF II PMDLG++K R++ N Y + EF ADV
Sbjct: 1 VLKKLIDHECSWIFMQPVDPVELNLPDYFEIIKNPMDLGSIKKRMENNGYKLIAEFGADV 60
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLF 201
RLTF NA+ YN ++V K+A+++ + F
Sbjct: 61 RLTFDNAISYNGNGSDVCKVARDMKSTF 88
>gi|396080308|ref|NP_571275.2| bromodomain-containing protein 2 isoform 1 [Danio rerio]
gi|157280793|gb|ABV29329.1| bromodomain-containing protein 2a [Danio rerio]
Length = 836
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP ++ Q Q V G K+ + + + CS ILK L+ H A W F +PVD L +
Sbjct: 365 LPDSQNQHQPVRRG------KLSQQLRY-CSTILKELLSKKHTAYAWPFYKPVDVSSLGL 417
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY+ II PMDL T+K ++D Y + +F ADVRL FSN YNPP+++V MA+ L
Sbjct: 418 HDYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQ 477
Query: 199 NLFDIKWKSLEEKWSSEVPKAGLGKILSG 227
++F+ ++ + ++ +P A LG L G
Sbjct: 478 DVFEFRFAKMPDEPLESLPPASLGGGLGG 506
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K+L H W F+ PVD KL++PDY++II +PMD+GT+K RL+ N Y + E + D
Sbjct: 84 LVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDF 143
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIK---WKSLEEKWSSEVPKAGLGKILSGKMM 230
F+N +YN P +++ MAQ L F K +EE+ + VP+ K G+ +
Sbjct: 144 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPEVEEEIPAPVPRGKQSKPKKGQKL 203
>gi|157280791|gb|ABV29328.1| bromodomain-containing protein 2a [Danio rerio]
Length = 838
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP ++ Q Q V G K+ + + + CS ILK L+ H A W F +PVD L +
Sbjct: 367 LPDSQNQHQPVRRG------KLSQQLRY-CSTILKELLSKKHTAYAWPFYKPVDVSSLGL 419
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY+ II PMDL T+K ++D Y + +F ADVRL FSN YNPP+++V MA+ L
Sbjct: 420 HDYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQ 479
Query: 199 NLFDIKWKSLEEKWSSEVPKAGLGKILSG 227
++F+ ++ + ++ +P A LG L G
Sbjct: 480 DVFEFRFAKMPDEPLESLPPASLGGGLGG 508
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K+L H W F+ PVD KL++PDY++II +PMD+GT+K RL+ N Y + E + D
Sbjct: 84 LVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDF 143
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIK---WKSLEEKWSSEVPKAGLGKILSGKMM 230
F+N +YN P +++ MAQ L F K +EE+ + VP+ K G+ +
Sbjct: 144 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPEVEEEIPAPVPRGKQSKPKKGQKL 203
>gi|167391721|ref|XP_001739904.1| bromodomain-containing protein [Entamoeba dispar SAW760]
gi|165896243|gb|EDR23718.1| bromodomain-containing protein, putative [Entamoeba dispar SAW760]
Length = 264
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 69/118 (58%)
Query: 89 AQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKP 148
EV E P K ++ C ++K LM VF PVDP +IP+YF II P
Sbjct: 46 GYEVEEKPVIKNEPLNSFEKELCMNVMKQLMKVSESEVFMEPVDPEIWNIPNYFEIIKTP 105
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
MDLGTV ++ +N+Y D+F DVRLTF+NAM +NPP N VH A++L +F+ ++
Sbjct: 106 MDLGTVIKKIKKNMYYSIDQFSNDVRLTFTNAMTFNPPGNYVHSYAEKLYKIFENYYR 163
>gi|357130613|ref|XP_003566942.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 215
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 65/99 (65%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C +L L+ H WVF++PVD +L I DY+++I PMDLGTV +RL+R Y+ F
Sbjct: 36 RCRELLDQLLQHDDAWVFDKPVDVYELGISDYYTMIPDPMDLGTVSSRLNRLRYADPRAF 95
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
DVRLTF NAM +N ++ V+K A EL+ +F+ W S+
Sbjct: 96 AEDVRLTFRNAMTFNDEDDAVYKSAAELSRIFESGWASI 134
>gi|413950089|gb|AFW82738.1| hypothetical protein ZEAMMB73_647475 [Zea mays]
Length = 357
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 117/184 (63%), Gaps = 14/184 (7%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
Q+SP K +RAA+L+SRFADTILKA+++ L D K DP KL++E+E LE+ QREE+AR++
Sbjct: 83 QVSPDKQIRAALLRSRFADTILKAREKAL-DQTTKKDPEKLRREREELERVQREERARLQ 141
Query: 480 AQIKAAEAASR-------MKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELE 532
A+ KAAE + +A E K+QRE EREAAR ALQ+ME+TV+I + LK+LE
Sbjct: 142 AEAKAAEDVRKRAEAAAADEAAAEAKRQRELEREAARKALQEMEKTVDINEGIHFLKDLE 201
Query: 533 MLSGCCLSPHLLNGSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDEEILNLD-GDGE 591
ML G + N F+ + LE++ L+MK+D +DED + + D E
Sbjct: 202 ML-GSVTGEQIPNLVGETSPGFQMGSYT--LEKLELYMKNDE--DDEDGDFTDEPVADVE 256
Query: 592 EGEI 595
EGEI
Sbjct: 257 EGEI 260
>gi|396080310|ref|NP_001257500.1| bromodomain-containing protein 2 isoform 2 [Danio rerio]
gi|94732369|emb|CAK04960.1| bromodomain-containing 2 [Danio rerio]
gi|190337777|gb|AAI63905.1| Bromodomain-containing 2a [Danio rerio]
gi|190339055|gb|AAI63902.1| Bromodomain-containing 2a [Danio rerio]
Length = 832
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP ++ Q Q V G K+ + + + CS ILK L+ H A W F +PVD L +
Sbjct: 365 LPDSQNQHQPVRRG------KLSQQLRY-CSTILKELLSKKHTAYAWPFYKPVDVSSLGL 417
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY+ II PMDL T+K ++D Y + +F ADVRL FSN YNPP+++V MA+ L
Sbjct: 418 HDYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQ 477
Query: 199 NLFDIKWKSLEEKWSSEVPKAGLGKILSG 227
++F+ ++ + ++ +P A LG L G
Sbjct: 478 DVFEFRFAKMPDEPLESLPPASLGGGLGG 506
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K+L H W F+ PVD KL++PDY++II +PMD+GT+K RL+ N Y + E + D
Sbjct: 84 LVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDF 143
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIK---WKSLEEKWSSEVPKAGLGKILSGKMM 230
F+N +YN P +++ MAQ L F K +EE+ + VP+ K G+ +
Sbjct: 144 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPEVEEEIPAPVPRGKQSKPKKGQKL 203
>gi|299472993|emb|CBN77394.1| Zinc finger, TAZ-type [Ectocarpus siliculosus]
Length = 1359
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR---NLYSVSDE 168
+L L GWVFN PVDPV L++PDYF II+ PMDLGTV +L + Y +E
Sbjct: 420 GAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTVARKLAKEGAGGYLEHEE 479
Query: 169 FVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
F ADV+L F NAM YN PE+ V+ +A+ + F+ W
Sbjct: 480 FAADVQLVFDNAMKYNGPESEVYPVAERMKKEFNKDW 516
>gi|298706226|emb|CBJ29267.1| Zinc finger, TAZ-type [Ectocarpus siliculosus]
Length = 1079
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 114 ILKSLMMHPAG---WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
IL LM G +FN PVDP+KL IPDYF + PMDLGT+K+RL Y+ +EF
Sbjct: 604 ILTKLMSSGTGPQRGLFNVPVDPLKLGIPDYFKRVPHPMDLGTIKSRLLSMSYTTPEEFA 663
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK----SLEEKWS 213
+DVRL F NA+ +NP + VH A +L N FD ++ L+E W+
Sbjct: 664 SDVRLVFKNAIGFNPETHFVHTWAVQLLNEFDQEYSKQIGKLDEGWA 710
>gi|20302741|gb|AAM18869.1|AF391288_5 unknown [Branchiostoma floridae]
Length = 664
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
Query: 78 RSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLD 137
R SI+ + E + PK K +M + + V++K++ H W F+ PVD VKL+
Sbjct: 13 RPSIMYAEGYETSESKQAPK-KPGRMTNQLQYLLKVVMKAVWKHNFAWPFHEPVDWVKLN 71
Query: 138 IPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQEL 197
IPDY II PMDLGT+K RL+ N Y + E + D L F+N +YN P +V+ MAQ L
Sbjct: 72 IPDYPKIIKTPMDLGTIKKRLETNYYYSAKECIQDFNLMFTNCYVYNKPGEDVYLMAQTL 131
Query: 198 NNLF 201
LF
Sbjct: 132 EKLF 135
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 82/144 (56%), Gaps = 13/144 (9%)
Query: 78 RSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQ----------CSVILKSLMM--HPA-G 124
R + +P +R++ I+ P+ + P+ ++ + + C I+K + H A
Sbjct: 322 RPAKIPPVRRESGRQIKPPRRELPETEQHSSKKKGKLSAQLKYCQGIIKEMFAKKHAAYA 381
Query: 125 WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYN 184
W F PVD L + DY II PMDLGTVK ++D Y + EF +D+R+ FSN YN
Sbjct: 382 WPFYEPVDADLLGLHDYHEIIKHPMDLGTVKKKMDTREYKSAQEFASDMRMIFSNCYRYN 441
Query: 185 PPENNVHKMAQELNNLFDIKWKSL 208
PPE++V +MA++L ++F++K+ +
Sbjct: 442 PPEHDVVQMARKLQDVFEMKYAKM 465
>gi|440800738|gb|ELR21773.1| bromodomain domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 904
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 89 AQEVIEGPKDKRPKMDR---GVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSII 145
A+ V PK K K+D + +C I+ SL+ W FN+PVDPV L IP YF II
Sbjct: 422 AEYVRRVPKKKVEKVDAMKGNILLECKKIMTSLISDTDAWPFNQPVDPVALGIPTYFDII 481
Query: 146 SKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+PMD GT+ +L Y V +F DV L F+NA+L+N P++++ A++L LF+
Sbjct: 482 KEPMDFGTINQKLKNGKYEVLAQFERDVHLVFANALLFNEPDSDIGYWAKKLRGLFE 538
>gi|28278510|gb|AAH45866.1| Brd2a protein [Danio rerio]
Length = 586
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP ++ Q Q V +R K+ + + + CS ILK L+ H A W F +PVD L +
Sbjct: 367 LPDSQNQHQPV------RRGKLSQQLRY-CSTILKELLSKKHTAYAWPFYKPVDVSSLGL 419
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY+ II PMDL T+K ++D Y + +F ADVRL FSN YNPP+++V MA+ L
Sbjct: 420 HDYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQ 479
Query: 199 NLFDIKWKSLEEKWSSEVPKAGLGKILSG 227
++F+ ++ + ++ +P A LG L G
Sbjct: 480 DVFEFRFAKMPDEPLESLPPASLGGGLGG 508
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+++ L H W F+ PVD KL++PDY++II +PMD+GT+K RL+ N Y + E + D+
Sbjct: 84 LVRMLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDL 143
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIK---WKSLEEKWSSEVPKA 219
F+N +YN P +++ MAQ L F K +EE+ + VP+
Sbjct: 144 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPEVEEEIPAPVPRG 192
>gi|328865269|gb|EGG13655.1| bromodomain-containing protein [Dictyostelium fasciculatum]
Length = 1155
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%)
Query: 106 GVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
G +C IL++L H + F PVDPV L I DYF ++ PMD GT++ L +Y
Sbjct: 451 GAMKRCFDILETLSNHQHSYPFLAPVDPVALGILDYFDVVKHPMDFGTIRNLLLSGVYQE 510
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
+EF D RL FSNA YNPP N VH MA L ++F+ K+ L+
Sbjct: 511 MEEFAIDCRLVFSNAKDYNPPNNPVHIMAITLEDIFERKYSKLQ 554
>gi|449674634|ref|XP_002169264.2| PREDICTED: bromodomain-containing protein 4-like [Hydra
magnipapillata]
Length = 1019
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 13/169 (7%)
Query: 51 ESNQLMMSKPYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQ 110
ES+ + KP R G+ + +SIL N Q Q + K+ K+ + +
Sbjct: 255 ESSNRTIKKPTRELPGE---------QENSILKRNTLQDQLTVLPLGKKKFKLTEQLKY- 304
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C++++K ++ H A W F +PV L + DYF II KPMDLGTVK ++D YS
Sbjct: 305 CNMLIKEMLSKKHEAYAWPFYKPVQAEALGLHDYFDIIKKPMDLGTVKFKMDCREYSSPS 364
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
+F DVRL F+N YNPP+++V KMA++L ++F+ K+ + ++ S V
Sbjct: 365 DFATDVRLIFTNCYKYNPPDHDVVKMARKLQDVFEYKFAKMPDELCSPV 413
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTV 154
KR + T+Q +LK++M H W F +PVD VKL IPDY+ I +PMD GT+
Sbjct: 7 KRAQKKGRTTNQLQFLLKTVMRQIQRHQFAWPFAKPVDAVKLKIPDYYEITKRPMDFGTI 66
Query: 155 KTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
K +L+ N Y+ + E + + +L F+N YN P ++ MA+ L FD K
Sbjct: 67 KKKLEHNDYTCAKECIEEFKLVFTNCYGYNKPGEDIVIMAEVLEKFFDEKL 117
>gi|449438275|ref|XP_004136914.1| PREDICTED: uncharacterized protein LOC101209352 [Cucumis sativus]
gi|449521741|ref|XP_004167888.1| PREDICTED: uncharacterized protein LOC101228592 [Cucumis sativus]
Length = 539
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C+ IL LM G +FN+PVD V L + DY+ II PMDLGTVK+ L +NLY +F
Sbjct: 173 CAQILNKLMKQKYGLIFNKPVDVVGLGLHDYYDIIKHPMDLGTVKSTLSKNLYDSPLDFA 232
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQE 196
DVRLTF+NAM YNP + VH +A++
Sbjct: 233 EDVRLTFNNAMRYNPKGHEVHILAEQ 258
>gi|217074676|gb|ACJ85698.1| unknown [Medicago truncatula]
Length = 471
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 111 CSVILKSLMMHPAGWVFNR-----PVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
C IL LM + +GW+FN PV+ L++ DYF II PMDLGTVK++L +N YS
Sbjct: 148 CGQILTKLMKNKSGWIFNTWIFNTPVNATALNLHDYFDIIKHPMDLGTVKSKLAKNAYST 207
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
EF DV+LTF NA+ YNP ++V+ A +L F+ ++ ++EK+
Sbjct: 208 PAEFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKF 254
>gi|357476127|ref|XP_003608349.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509404|gb|AES90546.1| Bromodomain-containing protein [Medicago truncatula]
Length = 533
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 111 CSVILKSLMMHPAGWVFNR-----PVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
C IL LM + +GW+FN PV+ L++ DYF II PMDLGTVK++L +N YS
Sbjct: 148 CGQILTKLMKNKSGWIFNTWIFNTPVNATALNLHDYFDIIKHPMDLGTVKSKLAKNAYST 207
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
EF DV+LTF NA+ YNP ++V+ A +L F+ ++ ++EK+
Sbjct: 208 PAEFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKF 254
>gi|218188757|gb|EEC71184.1| hypothetical protein OsI_03067 [Oryza sativa Indica Group]
Length = 264
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 63/99 (63%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C +L L+ H GWVF PVD L + DY+ IS PMDLGTV+ RL+R Y+ F
Sbjct: 55 RCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRCYADPWAF 114
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
ADVRLTF+NAM YN + V++ A EL+ +F+ W S+
Sbjct: 115 AADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGWPSV 153
>gi|357627183|gb|EHJ76955.1| putative bromodomain containing 3 [Danaus plexippus]
Length = 1323
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DYF II KPMDLGTVK +D Y +
Sbjct: 385 CNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKHNMDHRAYKTAA 444
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
EF ADVRL F+N YNPP+++V MA++L ++F++++ + ++ S
Sbjct: 445 EFAADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPDEPS 490
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 55/88 (62%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K++ H W F++PVD KL++PDY II KPMDLGT+K RL+ N Y + E + D
Sbjct: 71 VIKAVWKHKFAWPFHQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLESNYYYSAQECIQDF 130
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +V MAQ L LF
Sbjct: 131 NTMFTNCYVYNKPGEDVVVMAQTLEKLF 158
>gi|340729450|ref|XP_003403016.1| PREDICTED: homeotic protein female sterile-like, partial [Bombus
terrestris]
Length = 497
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVKT++D Y +
Sbjct: 19 CNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREYKTAQ 78
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF +DVRL F+N YNPP+++V MA++L ++F++++
Sbjct: 79 EFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRY 116
>gi|390352956|ref|XP_003728006.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Strongylocentrotus purpuratus]
Length = 568
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F+ PVDP KL +PDY+ II PMDLGT+K RL+ Y + E ++D
Sbjct: 208 VVLKALWKHQFAWPFHHPVDPTKLALPDYYKIIKTPMDLGTIKKRLESIYYHSAKECISD 267
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP--KAGLGKILSG 227
+L F+N L++ P +V MAQ L LF K + ++ P K G+G +SG
Sbjct: 268 FKLVFTNCYLHDKPGEDVVLMAQALEKLFLTKVAQMPQEEIELAPPVKPGMGDDISG 324
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ++K LM H W F +PVD + DY II PMD+GT+K +L+ Y ++
Sbjct: 425 CYGVIKELMSKKHSVYAWPFFKPVDADVFGLHDYHEIIKTPMDMGTIKVKLENRDYKNAN 484
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
+F ADVRL F N YNP +N+V KMA++L N+F++K+ + +
Sbjct: 485 DFAADVRLIFRNCYKYNPRDNDVVKMARKLENVFEVKFAKISD 527
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 140 DYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNN 199
DY II PMDLGT+K RL+ Y + E ++D L F+N L+N P +V MAQ L
Sbjct: 1 DYLKIIKTPMDLGTIKKRLESIYYHSAKECISDFNLVFTNCYLHNKPGEDVVFMAQALEK 60
Query: 200 LFDIKWKSLEEKWSSEVP--KAGLGKILSG 227
LF K + ++ P K G+G +SG
Sbjct: 61 LFLTKVAQMPQEEIELAPPVKPGMGDDISG 90
>gi|345488359|ref|XP_003425887.1| PREDICTED: hypothetical protein LOC100119446 isoform 3 [Nasonia
vitripennis]
Length = 1549
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H + W F +PVD L + DY II KPMDLGTVK ++D+ Y+ +
Sbjct: 399 CNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKREYNTAS 458
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGL 221
EF ADVRL F+N YNPP+++V MA++L ++F++++ + ++ P GL
Sbjct: 459 EFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKIPDE-----PMGGL 507
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 51/91 (56%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+LK L H W F +PVD KL++PDY II MDLGT+K RL+ Y E V D+
Sbjct: 76 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 135
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIK 204
F+N +YN P +V MAQ L LF K
Sbjct: 136 NTMFTNCYVYNKPGEDVVVMAQTLERLFLTK 166
>gi|345488355|ref|XP_003425886.1| PREDICTED: hypothetical protein LOC100119446 isoform 2 [Nasonia
vitripennis]
gi|345488361|ref|XP_003425888.1| PREDICTED: hypothetical protein LOC100119446 isoform 4 [Nasonia
vitripennis]
Length = 1555
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H + W F +PVD L + DY II KPMDLGTVK ++D+ Y+ +
Sbjct: 399 CNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKREYNTAS 458
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGL 221
EF ADVRL F+N YNPP+++V MA++L ++F++++ + ++ P GL
Sbjct: 459 EFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKIPDE-----PMGGL 507
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 51/91 (56%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+LK L H W F +PVD KL++PDY II MDLGT+K RL+ Y E V D+
Sbjct: 76 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 135
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIK 204
F+N +YN P +V MAQ L LF K
Sbjct: 136 NTMFTNCYVYNKPGEDVVVMAQTLERLFLTK 166
>gi|413948432|gb|AFW81081.1| hypothetical protein ZEAMMB73_211968 [Zea mays]
Length = 305
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 113/183 (61%), Gaps = 15/183 (8%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
Q+SP K +RAA+L+SRFADTILKA+++ L D K DP KL++E+E LE+ QREE+AR++
Sbjct: 34 QVSPDKQIRAALLRSRFADTILKAREKAL-DQTTKKDPEKLRREREELERVQREERARLQ 92
Query: 480 AQIKAAEAASR-------MKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELE 532
A KAAE + +A E K+QRE EREAAR ALQ+ME+ V+I LK+LE
Sbjct: 93 ADAKAAEDVRKRAEAAAADEAAAEAKRQRELEREAARKALQEMEKIVDINEGSHFLKDLE 152
Query: 533 MLSGCCLSPHLLNGSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDEEILNLDGDGEE 592
ML G + N F+ N LE++GL++K+D + DE + D EE
Sbjct: 153 ML-GSVTGEQIPNLVGETSPGFQMGS--NTLEKLGLYVKNDEDGDFTDEPV----ADVEE 205
Query: 593 GEI 595
GEI
Sbjct: 206 GEI 208
>gi|390352946|ref|XP_003728004.1| PREDICTED: uncharacterized protein LOC100892105 [Strongylocentrotus
purpuratus]
Length = 1350
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V++K+L H W F+ PVDP KL + DYF II PMDLGT+K RL+ Y + E ++D
Sbjct: 46 VVMKALWKHQFAWPFHHPVDPTKLALLDYFKIIKTPMDLGTIKKRLESIYYHSAKECISD 105
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP--KAGLGKILSG 227
L F+N +YN P +V MAQ L LF K + ++ P K G+G +SG
Sbjct: 106 FNLMFTNCYVYNKPGEDVVLMAQALEKLFLTKVAQMPQEEIELAPPVKPGMGDDISG 162
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 5/144 (3%)
Query: 70 IASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWV 126
I R +I P N R+ E + K K+ K+ + + C ++K LM H A W
Sbjct: 324 IPGRRESSRRNIKPPN-RELPESDQHQKGKKGKLTAQLKY-CYGVIKELMSKKHSAYAWP 381
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVD L + DY II PMD+GTVK +L+ Y +++F A+VRL F+N YNPP
Sbjct: 382 FFKPVDADVLGLHDYHEIIKTPMDMGTVKVKLENRDYKNANDFAANVRLIFTNCYKYNPP 441
Query: 187 ENNVHKMAQELNNLFDIKWKSLEE 210
+++V MA++L N+F++K+ + +
Sbjct: 442 DHDVVGMARKLQNVFEVKFAKMPD 465
>gi|345488357|ref|XP_001603224.2| PREDICTED: hypothetical protein LOC100119446 isoform 1 [Nasonia
vitripennis]
Length = 1549
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H + W F +PVD L + DY II KPMDLGTVK ++D+ Y+ +
Sbjct: 393 CNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKREYNTAS 452
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGL 221
EF ADVRL F+N YNPP+++V MA++L ++F++++ + ++ P GL
Sbjct: 453 EFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKIPDE-----PMGGL 501
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 51/91 (56%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+LK L H W F +PVD KL++PDY II MDLGT+K RL+ Y E V D+
Sbjct: 70 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 129
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIK 204
F+N +YN P +V MAQ L LF K
Sbjct: 130 NTMFTNCYVYNKPGEDVVVMAQTLERLFLTK 160
>gi|413948431|gb|AFW81080.1| hypothetical protein ZEAMMB73_211968 [Zea mays]
Length = 269
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 113/183 (61%), Gaps = 15/183 (8%)
Query: 420 QMSPKKALRAAMLKSRFADTILKAQQRTLLDHGDKADPVKLQQEKERLEQRQREEKARIE 479
Q+SP K +RAA+L+SRFADTILKA+++ L D K DP KL++E+E LE+ QREE+AR++
Sbjct: 34 QVSPDKQIRAALLRSRFADTILKAREKAL-DQTTKKDPEKLRREREELERVQREERARLQ 92
Query: 480 AQIKAAEAASR-------MKAEIELKKQREKEREAARVALQKMERTVEIEHNLEILKELE 532
A KAAE + +A E K+QRE EREAAR ALQ+ME+ V+I LK+LE
Sbjct: 93 ADAKAAEDVRKRAEAAAADEAAAEAKRQRELEREAARKALQEMEKIVDINEGSHFLKDLE 152
Query: 533 MLSGCCLSPHLLNGSEAQKRAFKEAHFKNPLERIGLFMKSDYLVEDEDEEILNLDGDGEE 592
ML G + N F+ N LE++GL++K+D + DE + D EE
Sbjct: 153 ML-GSVTGEQIPNLVGETSPGFQMG--SNTLEKLGLYVKNDEDGDFTDEPV----ADVEE 205
Query: 593 GEI 595
GEI
Sbjct: 206 GEI 208
>gi|148725667|emb|CAN87975.1| novel protein (zgc:77289) [Danio rerio]
Length = 729
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 62 RSSGGKKMIASEHSK---ERSS----ILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVI 114
RS M+ S+HSK R S I P K ++ P +K+ K++ + + C I
Sbjct: 243 RSESPTAMLESKHSKVISRRESTGRPIKPPKKDLEDGDVQQPGNKKSKLNDHLKY-CDTI 301
Query: 115 LKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
LK ++ H A W F +PVD L++ DY II +PMDL TVK ++D Y + F A
Sbjct: 302 LKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYPDAQNFAA 361
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
DVRL FSN YNPP++ V MA++L ++F++K+ +
Sbjct: 362 DVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F PVD +KL++PDY +I PMD+GT+K RL+ N Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D F+N +YN P +++ MAQ L +F
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|328788637|ref|XP_624214.3| PREDICTED: hypothetical protein LOC551826 [Apis mellifera]
Length = 1492
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 72/118 (61%), Gaps = 11/118 (9%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVKT++D Y +
Sbjct: 415 CNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREYKTAQ 474
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKIL 225
EF +DVRL F+N YNPP+++V MA++L ++F++++ +++P +G I+
Sbjct: 475 EFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRY--------AKIPDEPMGSIV 524
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 52/91 (57%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+LK + H W F +PVD KL++PDY II +PMDLGT+K RL+ Y E + D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIK 204
F+N +YN P +V MAQ L LF K
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTK 168
>gi|167381013|ref|XP_001735535.1| bromodomain-containing factor [Entamoeba dispar SAW760]
gi|165902414|gb|EDR28252.1| bromodomain-containing factor, putative [Entamoeba dispar SAW760]
Length = 388
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C + + LM P FN PVDPV L +P YFS+I +PMDLGT+K L Y +EF
Sbjct: 102 KCKELNRKLMNQPESPAFNTPVDPVALQVPTYFSVIKRPMDLGTIKHNLSDKKYITKEEF 161
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
AD+ L F NA+L+N P++ V+ A +L F+ WK+
Sbjct: 162 QADMLLVFDNALLFNHPDSEVYHWAVKLKKQFETLWKN 199
>gi|350416103|ref|XP_003490841.1| PREDICTED: homeotic protein female sterile-like isoform 1 [Bombus
impatiens]
Length = 1486
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 14/162 (8%)
Query: 60 PYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQ--------C 111
P R G++ I + ++PF+ QA + G ++P+ G + + C
Sbjct: 359 PTRRESGRQ-IKKPTRQAEDGLVPFH--QANMPLIGAMAQQPQHTTGKSKEKLSEALKSC 415
Query: 112 SVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDE 168
+ ILK L H W F +PVD L + DY II KPMDLGTVKT++D Y + E
Sbjct: 416 NEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREYKTAQE 475
Query: 169 FVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
F +DVRL F+N YNPP+++V MA++L ++F++++ + +
Sbjct: 476 FASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPD 517
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 107 VTHQCSV----ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
VT+Q +LK + H W F +PVD KL++PDY II +PMDLGT+K RL+
Sbjct: 67 VTNQLQFLQKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTY 126
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPKA 219
Y E + D F+N +YN P +V MAQ L LF K + E + VPK
Sbjct: 127 YWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEEVELEPPVPKG 186
Query: 220 GLGK 223
GK
Sbjct: 187 PKGK 190
>gi|334321601|ref|XP_001377106.2| PREDICTED: bromodomain testis-specific protein [Monodelphis
domestica]
Length = 1066
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD KL +PDY+SII KPMDL T+K RL+ Y S E V D
Sbjct: 37 VVLKALWRHSFSWPFQQPVDAAKLKLPDYYSIIKKPMDLSTIKKRLEHKYYVKSSECVED 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
++ F+N LYN P +++ MAQ L LF
Sbjct: 97 LKTMFTNCYLYNKPGDDIVLMAQALEKLF 125
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK + H A W F +PVD L + +Y+ ++ PMDLGT+K ++D Y +
Sbjct: 277 CNEILKEMFAKKHLAYAWPFYKPVDVTALGLHNYYDVVKSPMDLGTIKKKMDNQEYKDAH 336
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
EF ADVRL F N YNPP++ V MA+ L ++F++++ + ++ +P + K
Sbjct: 337 EFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMQFAKIPDEPIERMPICYIKK 392
>gi|363736907|ref|XP_003641771.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific protein
[Gallus gallus]
Length = 995
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V++K++ H W F++PVD L++PDY+SII KPMDL T+K RL+ N Y+ S E + D
Sbjct: 38 VVMKAMWRHNFSWPFHQPVDAAALNLPDYYSIIKKPMDLSTIKKRLEHNYYTKSAECIDD 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+ F N +YN P +++ MAQEL +F
Sbjct: 98 FKTMFLNCYIYNKPGDDIVFMAQELEKVF 126
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK + H A F R D V + + I P DLGT+K ++D Y
Sbjct: 287 CKEILKEMFSKKHSAYARPFLRSADVVSFSLGEKKGITKCPTDLGTIKKKMDNFEYRDIQ 346
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF DVRL F N N P++ V MA++L ++F+ + + ++ ++ +
Sbjct: 347 EFATDVRLMFMNCYKRNSPDHEVVAMAKKLQDVFETHFAKIPDEPATSI 395
>gi|440790347|gb|ELR11630.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 2175
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
QC +L L H W FN+PVDPV LD+PDY+ ++ +PMDLGT+ +L Y+ EF
Sbjct: 57 QCQALLSRLKRHKHAWPFNQPVDPVALDLPDYWEVVKRPMDLGTIGDKLTSGQYAKVSEF 116
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQEL 197
+ D+ L +SN +LYNPP++ + + A L
Sbjct: 117 LDDLELVWSNCLLYNPPDDPISEWATLL 144
>gi|325193402|emb|CCA27731.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 2004
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 58/98 (59%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L LM GW FN PVDPV+ +IPDYF II PMDLG +K RL+ Y+ D F ADV
Sbjct: 732 LLTKLMESEHGWAFNSPVDPVQWNIPDYFDIIKCPMDLGAIKKRLENEHYNSVDAFAADV 791
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
RL F N + YN N + A++L F+ S++ +
Sbjct: 792 RLVFENCIAYNSSTNKFNIAAKQLLTQFEKNLTSIKSQ 829
>gi|407042940|gb|EKE41627.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 315
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C + + LM P FN PVDPV L +P YFS+I +PMDLGT+K L Y +EF
Sbjct: 29 KCKELNRKLMNQPESPAFNTPVDPVALQVPTYFSVIKRPMDLGTIKHNLSDKKYITKEEF 88
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
AD+ L F NA+L+N P++ V+ A +L F+ WK+
Sbjct: 89 QADMLLVFDNALLFNHPDSEVYHWAVKLKKQFETLWKN 126
>gi|383859381|ref|XP_003705173.1| PREDICTED: homeotic protein female sterile-like [Megachile
rotundata]
Length = 1489
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 14/162 (8%)
Query: 60 PYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQ--------C 111
P R G++ I + ++PF+ QA + G ++P+ G + + C
Sbjct: 359 PARRESGRQ-IKKPTRQAEDGLVPFH--QANMPLIGAMAQQPQHTTGKSKEKLSEALKSC 415
Query: 112 SVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDE 168
+ ILK L H W F +PVD L + DY II KPMDLGTVKT++D Y + E
Sbjct: 416 NEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREYKTAQE 475
Query: 169 FVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
F +DVRL F+N YNPP+++V MA++L ++F++++ + +
Sbjct: 476 FASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPD 517
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+LK + H W F +PVD KL++PDY II +PMDLGT+K RL+ Y E + D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPKAGLGK 223
F+N +YN P +V MAQ L LF K + E + VPK GK
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEEVELEPPVPKGPKGK 190
>gi|148725668|emb|CAN87976.1| novel protein (zgc:77289) [Danio rerio]
Length = 664
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 62 RSSGGKKMIASEHSKERS-------SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVI 114
RS M+ S+HSK S I P K ++ P +K+ K++ + + C I
Sbjct: 243 RSESPTAMLESKHSKVISRRESTGRPIKPPKKDLEDGDVQQPGNKKSKLNDHLKY-CDTI 301
Query: 115 LKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
LK ++ H A W F +PVD L++ DY II +PMDL TVK ++D Y + F A
Sbjct: 302 LKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYPDAQNFAA 361
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
DVRL FSN YNPP++ V MA++L ++F++K+ +
Sbjct: 362 DVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F PVD +KL++PDY +I PMD+GT+K RL+ N Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D F+N +YN P +++ MAQ L +F
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|350416106|ref|XP_003490842.1| PREDICTED: homeotic protein female sterile-like isoform 2 [Bombus
impatiens]
Length = 1452
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVKT++D Y +
Sbjct: 381 CNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREYKTAQ 440
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF +DVRL F+N YNPP+++V MA++L ++F++++ + +
Sbjct: 441 EFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPD 483
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 107 VTHQCSV----ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
VT+Q +LK + H W F +PVD KL++PDY II +PMDLGT+K RL+
Sbjct: 59 VTNQLQFLQKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTY 118
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPKA 219
Y E + D F+N +YN P +V MAQ L LF K + E + VPK
Sbjct: 119 YWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEEVELEPPVPKG 178
Query: 220 GLGK 223
GK
Sbjct: 179 PKGK 182
>gi|221044398|dbj|BAH13876.1| unnamed protein product [Homo sapiens]
Length = 951
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 56/89 (62%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y+ + E + D
Sbjct: 38 VVLKNLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ ++ PMDLGT+K ++D
Sbjct: 273 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDN 332
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 333 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 380
>gi|395334140|gb|EJF66516.1| Bromodomain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 798
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 11/105 (10%)
Query: 111 CSVILKSL-------MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
C ILK L + HP F PVDP+K+ IP+Y I+ KPMDL T+K +LD Y
Sbjct: 454 CEKILKDLHQKQHYQIAHP----FYEPVDPIKMGIPEYPKIVKKPMDLSTMKRKLDTGDY 509
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++F D RL N M +NPP N VH+ + L NLFD KWK+L
Sbjct: 510 PTPEKFRDDFRLMVKNCMTFNPPGNPVHEAGKSLQNLFDEKWKNL 554
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 16/112 (14%)
Query: 120 MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL--------DRNL----YSVSD 167
M AG N PVDPV L IP Y +I +PMD T++ +L D N Y ++
Sbjct: 264 MKDAGPFLN-PVDPVALGIPHYPQVIKRPMDFSTIERKLAASNPAKPDPNPSNPRYHHAE 322
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
+FV DVRL F+N + +N P++ V +M + + +FD K +++ E PKA
Sbjct: 323 QFVQDVRLIFTNCVTFNGPDHPVTQMGKRVEAVFD---KQIKQMPPPEEPKA 371
>gi|183232851|ref|XP_651394.2| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|169801846|gb|EAL46008.2| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449707679|gb|EMD47300.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 315
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C + + LM P FN PVDPV L +P YFS+I +PMDLGT+K L Y +EF
Sbjct: 29 KCKELNRKLMNQPESPAFNTPVDPVALQVPTYFSVIKRPMDLGTIKHNLSDKKYITKEEF 88
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
AD+ L F NA+L+N P++ V+ A +L F+ WK+
Sbjct: 89 QADMLLVFDNALLFNHPDSEVYHWAVKLKKQFETLWKN 126
>gi|332221876|ref|XP_003260089.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Nomascus
leucogenys]
gi|332221878|ref|XP_003260090.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Nomascus
leucogenys]
gi|441637315|ref|XP_004090055.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 945
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 101/207 (48%), Gaps = 14/207 (6%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y+ + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEV 232
FSN LYN P +++ MAQ L LF K S++P+ +++ GK
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKL--------SQMPQE--EQVVGGKERIK 147
Query: 233 NDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYCARAVE-VERAKPAQNLSSKLVIKNL 291
T+QN + +L S K+ +++A S + ++ + A+ A SS +
Sbjct: 148 KGTQQNIAVSSAKEKSLPSTTEKVFKQQAIPSVFPKTSISPLNVAQGASVNSSSQTAAQV 207
Query: 292 HKGTN---DGGRLACNIVNAKPPLSPV 315
KG D A + V A SP+
Sbjct: 208 TKGVKRKADTTTPATSAVKASSEFSPI 234
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 10/133 (7%)
Query: 79 SSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM---HPAGWVFNRPVDPVK 135
+++LP +++Q V K K+ + H CS ILK ++ W F PVD
Sbjct: 251 TNVLPDSQQQYNVV------KSVKVTEQLRH-CSEILKEMLAKKHFSYAWPFYNPVDVNA 303
Query: 136 LDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQ 195
L + +Y+ I+ PMDLGT+K ++D Y + +F ADVRL F N YNPP++ V MA+
Sbjct: 304 LGLHNYYDIVKNPMDLGTIKEKMDNQEYEDAYKFAADVRLMFMNCYKYNPPDHEVVTMAR 363
Query: 196 ELNNLFDIKWKSL 208
L ++F+ + +
Sbjct: 364 MLQDVFETHFSKI 376
>gi|345565069|gb|EGX48025.1| hypothetical protein AOL_s00081g352 [Arthrobotrys oligospora ATCC
24927]
Length = 890
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 111 CSVILKSL---MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C I+K L + + F PVDPV L+IPDYF II KPMD+ ++ +L+ N Y+ S+
Sbjct: 532 CETIMKELWKKQHNSIAYPFYNPVDPVALEIPDYFKIIKKPMDMSEIQRKLNHNEYNNSN 591
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF AD+RL F+N +NPP + V+ ++L +FD KW
Sbjct: 592 EFEADIRLMFNNCYKFNPPSSPVYDCGKQLEAVFDEKW 629
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPVKL +P YF II PM L ++ +L N Y E DV L N++L+N
Sbjct: 328 FLNPVDPVKLQLPTYFEIIKNPMSLFDIEKKLTANEYHNPAELKGDVHLMVQNSILFNGV 387
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
E H + Q ++ D +LE+ +E+
Sbjct: 388 E---HAVTQSGIHIRDKYLHALEKMPPAEI 414
>gi|33355659|gb|AAQ16198.1| testis-specific BRDT protein [Homo sapiens]
Length = 960
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y+ + E + D
Sbjct: 51 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 110
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 111 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 139
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ ++ PMDLGT+K ++D
Sbjct: 282 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDN 341
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 342 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 389
>gi|378734234|gb|EHY60693.1| bromodomain-containing protein [Exophiala dermatitidis NIH/UT8656]
Length = 968
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 111 CSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +LK L P F PVDPV L+IP YF II KPMDLGT++T+L+ N+Y +
Sbjct: 612 CDEVLKELTATKYWPINQYFTHPVDPVALNIPTYFQIIKKPMDLGTIRTKLNNNVYEKAK 671
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
+F DVRL F N +NP + V+ +L LF+ KW + ++ W
Sbjct: 672 DFEEDVRLVFKNCYKFNPEGDLVNSAGHQLEELFNKKWAT-KDDW 715
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++ +L A F PVDPV L+IP YF +I PMDLGT+ RL RN Y+ F++D
Sbjct: 412 VISNLKKSNASAAFRLPVDPVALNIPTYFEVIKHPMDLGTIDQRLKRNEYTSVAAFISDF 471
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPK 218
L N + +N P++ V + A+++ + F+ + ++L + E PK
Sbjct: 472 ELIVDNCVKFNGPDHGVTQAARKMQSSFNSQMRNLPKASIEEPPK 516
>gi|338797757|ref|NP_001229735.1| bromodomain testis-specific protein isoform a [Homo sapiens]
Length = 951
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y+ + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ ++ PMDLGT+K ++D
Sbjct: 273 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDN 332
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 333 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 380
>gi|427798983|gb|JAA64943.1| Putative bromodomain-containing protein 2, partial [Rhipicephalus
pulchellus]
Length = 852
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 63/109 (57%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
P +R + + H V++K++ H W F +PVD VKL++PDY II PMDLGT+K
Sbjct: 52 PASRRQRTTNQLQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIK 111
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIK 204
RL+ YS + E + D + F+N +YN P +V MAQ L LF K
Sbjct: 112 KRLEHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLFLTK 160
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Query: 111 CSVILKSLMM--HPAG--WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ ILK L H AG W F +PVD L + DY II PMDLGTVK ++D Y
Sbjct: 385 CNSILKELFAKKH-AGYAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNREYKSP 443
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+EF DVRL F+N YNPP++ V MA++L ++F++++ +
Sbjct: 444 EEFAGDVRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRYAKM 485
>gi|226694198|sp|Q58F21.4|BRDT_HUMAN RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Cancer/testis antigen 9; Short=CT9; AltName:
Full=RING3-like protein
gi|108752098|gb|AAI11928.1| BRDT protein [synthetic construct]
gi|110645559|gb|AAI18499.1| BRDT protein [synthetic construct]
Length = 947
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y+ + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ ++ PMDLGT+K ++D
Sbjct: 269 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDN 328
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 329 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
>gi|46399198|ref|NP_001717.2| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|46399200|ref|NP_997072.1| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|338797755|ref|NP_001229734.1| bromodomain testis-specific protein isoform b [Homo sapiens]
Length = 947
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y+ + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ ++ PMDLGT+K ++D
Sbjct: 269 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDN 328
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 329 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
>gi|2554915|gb|AAB87862.1| BRDT [Homo sapiens]
Length = 947
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y+ + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ ++ PMDLGT+K ++D
Sbjct: 269 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDN 328
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 329 QEYKDAYSFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
>gi|427780035|gb|JAA55469.1| Putative bromodomain-containing protein 2 [Rhipicephalus
pulchellus]
Length = 873
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 63/109 (57%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
P +R + + H V++K++ H W F +PVD VKL++PDY II PMDLGT+K
Sbjct: 52 PASRRQRTTNQLQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIK 111
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIK 204
RL+ YS + E + D + F+N +YN P +V MAQ L LF K
Sbjct: 112 KRLEHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLFLTK 160
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F +PVD L + DY II PMDLGTVK ++D Y +EF DVRL F+N Y
Sbjct: 420 AWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYKY 479
Query: 184 NPPENNVHKMAQELNNLFDIKWKSL 208
NPP++ V MA++L ++F++++ +
Sbjct: 480 NPPDHEVVAMARKLQDVFEMRYAKM 504
>gi|47086635|ref|NP_997867.1| bromodomain-containing protein 3 [Danio rerio]
gi|41944567|gb|AAH65949.1| Bromodomain containing 3b [Danio rerio]
Length = 664
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 62 RSSGGKKMIASEHSKERS-------SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVI 114
RS M+ S+HSK S I P K ++ P +K+ K++ + + C I
Sbjct: 243 RSESPTAMLESKHSKVISRRESTGRPIKPPKKDLEDGDVQQPGNKKSKLNDHLKY-CDTI 301
Query: 115 LKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
LK ++ H A W F +PVD L++ DY II +PMDL TVK ++D Y + F A
Sbjct: 302 LKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYPDAQNFAA 361
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
D+RL FSN YNPP++ V MA++L ++F++K+ +
Sbjct: 362 DIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F PVD +KL++PDY +I PMD+GT+K RL+ N Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D F+N +YN P +++ MAQ L +F
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|119593512|gb|EAW73106.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593513|gb|EAW73107.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593514|gb|EAW73108.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593516|gb|EAW73110.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593517|gb|EAW73111.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|208965898|dbj|BAG72963.1| bromodomain, testis-specific [synthetic construct]
Length = 947
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y+ + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ ++ PMDLGT+K ++D
Sbjct: 269 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDN 328
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 329 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
>gi|427785339|gb|JAA58121.1| Putative bromodomain-containing protein 4 [Rhipicephalus
pulchellus]
Length = 1295
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 63/109 (57%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
P +R + + H V++K++ H W F +PVD VKL++PDY II PMDLGT+K
Sbjct: 52 PASRRQRTTNQLQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIK 111
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIK 204
RL+ YS + E + D + F+N +YN P +V MAQ L LF K
Sbjct: 112 KRLEHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLFLTK 160
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F +PVD L + DY II PMDLGTVK ++D Y +EF DVRL F+N Y
Sbjct: 401 AWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYKY 460
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLEEK 211
NPP++ V MA++L ++F++++ + ++
Sbjct: 461 NPPDHEVVAMARKLQDVFEMRYAKMPDE 488
>gi|307213342|gb|EFN88794.1| Homeotic protein female sterile [Harpegnathos saltator]
Length = 1514
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK+++D Y +
Sbjct: 405 CNDILKELFSKKHSGYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKSKMDNREYKTAQ 464
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL-EEKWSSEVPKAG 220
EF +DVRL F+N YNPP+++V MA++L ++F++++ + +E VP G
Sbjct: 465 EFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKIPDEPMGGMVPMKG 518
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 107 VTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
+T+Q +LK ++ H W F +PVD KL++PDY II +PMDLGT+K RL+
Sbjct: 59 ITNQLQFLLKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIERPMDLGTIKKRLENTY 118
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPKA 219
Y E + D F+N +YN P +V MAQ L LF K + E + +PK
Sbjct: 119 YWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEEVELDPPLPKG 178
Query: 220 GLGK 223
GK
Sbjct: 179 PKGK 182
>gi|296482055|tpg|DAA24170.1| TPA: bromodomain containing protein 3 [Bos taurus]
Length = 722
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 7/139 (5%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK-------I 224
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPASGT 163
Query: 225 LSGKMMEVNDTRQNCPKTP 243
S +V CP TP
Sbjct: 164 QSAGSQQVAAVSSVCPATP 182
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 110 QCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C ILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 314 HCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYPDA 373
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 374 QGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|390466206|ref|XP_003733541.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific
protein-like [Callithrix jacchus]
Length = 932
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
VILK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 38 VILKDLWKHDFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEELF 126
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 110 QCSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D Y +
Sbjct: 274 HCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYKDA 333
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF ADVRL F N YNPP++ V MA+ L ++F+ +
Sbjct: 334 YEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 372
>gi|384486789|gb|EIE78969.1| hypothetical protein RO3G_03674 [Rhizopus delemar RA 99-880]
Length = 489
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
+ F PVDPV L+IPDY +I+ PMDL T++T+L+RN Y D F AD++L F N LY
Sbjct: 208 SFPFLYPVDPVALNIPDYPTIVKHPMDLSTIETKLNRNEYDSPDAFAADIKLMFDNCYLY 267
Query: 184 NPPENNVHKMAQELNNLFDIKW 205
NPP ++ +A++L +FD KW
Sbjct: 268 NPPHLPIYDLAKQLQAIFDEKW 289
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 76 KERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVK 135
K + LP Q Q I G RP M + C+ I+++L H F PVD +K
Sbjct: 10 KSAADTLPSPPSQKQLSITG---GRP-MTKDQMKYCAAIMRNLKKHRDAAPFLNPVDYIK 65
Query: 136 LDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQ 195
L++PDY +I +P+DL + +L++N Y D+FVADVRL F+N YN PE + + Q
Sbjct: 66 LNVPDYPQVIKRPIDLTLIDQKLNQNEYVTVDDFVADVRLVFNNCFKYNGPEAMISVLCQ 125
Query: 196 ELNNLFD 202
+ + F+
Sbjct: 126 NVESAFE 132
>gi|355558166|gb|EHH14946.1| hypothetical protein EGK_00962, partial [Macaca mulatta]
Length = 897
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 45 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 104
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 105 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 133
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 276 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDN 335
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 336 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 383
>gi|432109400|gb|ELK33657.1| Bromodomain-containing protein 4 [Myotis davidii]
Length = 1183
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--EEKWSSEVPKAGLGK 223
F+N +YN P +++ MA+ L LF K L EE VP G G+
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVPAKGRGR 181
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 354 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 413
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 414 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 454
>gi|355745448|gb|EHH50073.1| hypothetical protein EGM_00839, partial [Macaca fascicularis]
Length = 957
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 49 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 108
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 109 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 137
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 280 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDN 339
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 340 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 387
>gi|326936210|ref|XP_003214150.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Meleagris gallopavo]
Length = 697
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
+ + V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y +
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNA 122
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
E + D F+N +YN P +++ MA+ L LF
Sbjct: 123 QECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS I+K + H A W F +PVD L + DY II PMDL T+K++L+ Y +
Sbjct: 280 CSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQ 339
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNP ++ V MA++L ++F++++ +
Sbjct: 340 EFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKM 380
>gi|403284014|ref|XP_003933383.1| PREDICTED: bromodomain testis-specific protein [Saimiri boliviensis
boliviensis]
Length = 1132
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
VILK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 220 VILKDLWKHDLSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 279
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 280 FNTMFSNCYLYNKPGDDIVLMAQALEELF 308
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 454 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDN 513
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
Y + EF ADVRL F N YNPP++ V MA+ L ++F+ + ++ ++ +P
Sbjct: 514 QEYKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFATIPDEPVESMP 570
>gi|410967748|ref|XP_003990377.1| PREDICTED: bromodomain testis-specific protein [Felis catus]
Length = 939
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 37 VVLKALWRHNFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEHKYYMKASECIED 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+ FSN LYN P +++ MAQ L LF
Sbjct: 97 FNIMFSNCYLYNKPGDDIVLMAQALEKLF 125
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 110 QCSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D Y +
Sbjct: 275 HCSEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMDNQEYKDA 334
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
EF ADVRL F N YNPP++ V MA+ L ++F++ + + ++ +P
Sbjct: 335 YEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMHFAKIPDEPVESMP 385
>gi|397629973|gb|EJK69582.1| hypothetical protein THAOC_09143 [Thalassiosira oceanica]
Length = 491
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 73/119 (61%), Gaps = 2/119 (1%)
Query: 92 VIEGPKDKRPKMD-RGVTHQCSVILKSLMMHP-AGWVFNRPVDPVKLDIPDYFSIISKPM 149
V+ P + P +D V QC I+ L+ P A VF +PVD VK D+P YF ++ KPM
Sbjct: 62 VVPPPTPQFPMLDGLPVGIQCLRIVNLLLELPNAAAVFGKPVDTVKYDLPTYFDVVKKPM 121
Query: 150 DLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
DLGTV +L + Y ++F +D+ LTF+NAML+N + V ++AQ L N FD ++K +
Sbjct: 122 DLGTVSKKLTQGKYQYIEDFESDMHLTFNNAMLFNGKGHVVSELAQNLKNTFDDEYKQM 180
>gi|156230233|gb|AAI51887.1| Brd3b protein [Danio rerio]
Length = 500
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 88/159 (55%), Gaps = 11/159 (6%)
Query: 62 RSSGGKKMIASEHSKERS-------SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVI 114
RS M+ S+HSK S I P K ++ P +K+ K++ + + C I
Sbjct: 243 RSESPTAMLESKHSKVISRRESTGRPIKPPKKDLEDGDVQQPGNKKSKLNDHLKY-CDTI 301
Query: 115 LKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
LK ++ H A W F +PVD L++ DY II +PMDL TVK ++D Y + F A
Sbjct: 302 LKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYPDAQNFAA 361
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
DVRL FSN YNPP++ V MA++L ++F++K+ + +
Sbjct: 362 DVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKMPD 400
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F PVD +KL++PDY +I PMD+GT+K RL+ N Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D F+N +YN P +++ MAQ L +F
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|149034725|gb|EDL89462.1| bromodomain containing 4, isoform CRA_a [Rattus norvegicus]
Length = 915
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF ADVRL FSN YNPP++ V MA++L ++F++++ + +
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 460
>gi|425906067|sp|Q4R8Y1.3|BRDT_MACFA RecName: Full=Bromodomain testis-specific protein
Length = 947
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 269 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDN 328
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 329 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
>gi|27804346|gb|AAO22237.1| BRD4-NUT fusion oncoprotein [Homo sapiens]
Length = 1846
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
>gi|402855232|ref|XP_003892235.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Papio
anubis]
gi|402855234|ref|XP_003892236.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Papio
anubis]
gi|402855236|ref|XP_003892237.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Papio
anubis]
Length = 945
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 269 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDN 328
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 329 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
>gi|291243780|ref|XP_002741778.1| PREDICTED: bromodomain containing 2-like [Saccoglossus kowalevskii]
Length = 821
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 62/100 (62%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K++ H W F+ PV+P +L +PDYF II PMDLGT+K RL+ N Y + + ++
Sbjct: 107 NVVMKAVWKHQFAWPFHAPVNPAELGLPDYFDIIKNPMDLGTIKKRLESNYYYSAKDCIS 166
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
D L F+N LYN P +V MAQ L LF K + ++
Sbjct: 167 DFNLMFTNCYLYNKPGEDVVLMAQALEKLFLTKVAQMPQE 206
>gi|397473963|ref|XP_003808463.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
paniscus]
gi|397473965|ref|XP_003808464.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
paniscus]
gi|397473967|ref|XP_003808465.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Pan
paniscus]
Length = 947
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 80 SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM---HPAGWVFNRPVDPVKL 136
++LP +++Q V K K+ + H CS ILK ++ W F PVD L
Sbjct: 252 NVLPDSQQQYNVV------KTVKVTEQLRH-CSEILKEMLAKKHFSYAWPFYNPVDVNAL 304
Query: 137 DIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQE 196
+ +Y+ I+ PMDLGT+K ++D Y + +F ADVRL F N YNPP++ V MA+
Sbjct: 305 GLHNYYDIVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARM 364
Query: 197 LNNLFDIKWKSL 208
L ++F+ + +
Sbjct: 365 LQDVFETHFSKI 376
>gi|156914867|gb|AAI52645.1| Brd3b protein [Danio rerio]
gi|163916192|gb|AAI57602.1| LOC100135304 protein [Xenopus (Silurana) tropicalis]
Length = 483
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 11/160 (6%)
Query: 62 RSSGGKKMIASEHSKERS-------SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVI 114
RS M+ S+HSK S I P K ++ P +K+ K++ G C I
Sbjct: 243 RSESPTAMLESKHSKVISRRESTGRPIKPPKKDLEDGDVQQPGNKKSKLN-GHLKYCDTI 301
Query: 115 LKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
LK ++ H A W F +PVD L++ DY II +PMDL TVK ++D Y + F A
Sbjct: 302 LKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYPDAQNFAA 361
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
D+RL FSN YNPP++ V MA++L ++F++K+ + ++
Sbjct: 362 DIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKMPDE 401
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F PVD +KL++PDY +I PMD+GT+K RL+ N Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D F+N +YN P +++ MAQ L +F
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|213405871|ref|XP_002173707.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001754|gb|EEB07414.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 596
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 111 CSVILKSL---MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS I+K L + F +PVDPV D PDYF II PMDL TV+ +L+ Y
Sbjct: 231 CSTIIKELHKRQYSTFAYPFYQPVDPVACDCPDYFDIIKHPMDLSTVQKKLNNGEYETPS 290
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+F AD+RL F+N YNP VH+M ++L +FD KW
Sbjct: 291 DFEADIRLIFNNCYTYNPVGTPVHEMGRKLEAVFDEKW 328
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%)
Query: 87 RQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIIS 146
R Q ++ K K M C I++ L F PVDPVK +IPDY +II
Sbjct: 45 RANQLAVDASKRKYDTMTPAQHKYCLAIVRQLKRTKDSIPFRAPVDPVKQNIPDYPTIIK 104
Query: 147 KPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
PMDLGT++ RL ++Y+ + EF+ D+RL FSN YN + V M + + +F+ + K
Sbjct: 105 HPMDLGTIEKRLTGHIYNSAQEFIDDMRLMFSNCFTYNGTTSPVGVMGKNIETIFERQLK 164
Query: 207 SL 208
L
Sbjct: 165 QL 166
>gi|344283171|ref|XP_003413346.1| PREDICTED: bromodomain-containing protein 4-like [Loxodonta
africana]
Length = 965
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWRHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|343962325|dbj|BAK62750.1| bromodomain testis-specific protein [Pan troglodytes]
Length = 947
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYMKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 269 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDN 328
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 329 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
>gi|167526004|ref|XP_001747336.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774171|gb|EDQ87803.1| predicted protein [Monosiga brevicollis MX1]
Length = 1632
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 9/119 (7%)
Query: 86 KRQA--QEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFS 143
KRQA +++ E P+D+ + H S +L+ L A F RPVDP++L+IPDYF
Sbjct: 591 KRQATSRQIKEWPRDE-------LKHHFSPVLERLKGMSAAECFLRPVDPIELNIPDYFE 643
Query: 144 IISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
II KPMDL T++ +L++ Y EF D+RL F NA YNP + V+K E++++F+
Sbjct: 644 IIKKPMDLSTIEDKLEKGTYKDPWEFCDDMRLMFKNAWTYNPKNHVVYKFTNEVSSVFE 702
>gi|412988890|emb|CCO15481.1| bromodomain-containing protein [Bathycoccus prasinos]
Length = 947
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 74 HSKERSSILPFNKRQAQEV-IEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVD 132
H + R + N+R +E IE D+R K + C +L + + W+F +PVD
Sbjct: 294 HKRMRDGRIIKNRRMLREAQIE---DERQKRRNVLIKSCRDVLNHVKRNKFHWIFTQPVD 350
Query: 133 PVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHK 192
VKL IPDY+ I+ PMDLG VK +LD Y+ +F D+RL F N LYN + +
Sbjct: 351 AVKLGIPDYYEIVKNPMDLGKVKEKLDGKKYTWPTDFADDMRLIFDNCALYNGTTTDAGQ 410
Query: 193 MAQELNNLFDIKW--KSLEEKWSSE 215
M + + F+ W ++E+K S E
Sbjct: 411 MGETVRGAFEEGWVKYNVEQKMSDE 435
>gi|145347283|ref|XP_001418103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578331|gb|ABO96396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 859
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 93 IEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLG 152
+E +D R K + +C +L + H +F PVDP K +PDYF II PMD+G
Sbjct: 260 VEQARDARRKE---MIRRCREVLIASKKHKYHKIFLVPVDPKKHGVPDYFDIIKNPMDMG 316
Query: 153 TVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
TVKT+LD Y EF AD+RL FSN +LYN ++ M + + LF+ W
Sbjct: 317 TVKTKLDTKAYLNPAEFCADMRLIFSNGLLYNGTASDAGVMTETVRQLFETAW 369
>gi|332809502|ref|XP_524767.3| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
troglodytes]
gi|332809504|ref|XP_003308258.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
troglodytes]
gi|410033223|ref|XP_003949508.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 870
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYMKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 269 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDN 328
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 329 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
>gi|33416361|gb|AAH55533.1| Brd3b protein [Danio rerio]
Length = 499
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 88/159 (55%), Gaps = 11/159 (6%)
Query: 62 RSSGGKKMIASEHSKERS-------SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVI 114
RS M+ S+HSK S I P K ++ P +K+ K++ + + C I
Sbjct: 243 RSESPTAMLESKHSKVISRRESTGRPIKPPKKDLEDGDVQQPGNKKSKLNDHLKY-CDTI 301
Query: 115 LKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
LK ++ H A W F +PVD L++ DY II +PMDL TVK ++D Y + F A
Sbjct: 302 LKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYPDAQNFAA 361
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
D+RL FSN YNPP++ V MA++L ++F++K+ + +
Sbjct: 362 DIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKMPD 400
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F PVD +KL++PDY +I PMD+GT+K RL+ N Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D F+N +YN P +++ MAQ L +F
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
>gi|71052031|gb|AAH35266.1| BRD4 protein [Homo sapiens]
gi|119604876|gb|EAW84470.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
gi|119604877|gb|EAW84471.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
Length = 794
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|296233153|ref|XP_002761896.1| PREDICTED: bromodomain-containing protein 4 [Callithrix jacchus]
Length = 985
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K + + D
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKDVFEMRFAKMPD 416
Query: 168 E 168
E
Sbjct: 417 E 417
>gi|62020593|gb|AAH17582.1| BRDT protein, partial [Homo sapiens]
Length = 462
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y+ + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 80 SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM---HPAGWVFNRPVDPVKL 136
++LP +++Q V K K+ + H CS ILK ++ W F PVD L
Sbjct: 252 NVLPDSQQQYNVV------KTVKVTEQLRH-CSEILKEMLAKKHFSYAWPFYNPVDVNAL 304
Query: 137 DIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQE 196
+ +Y+ ++ PMDLGT+K ++D Y + +F ADVRL F N YNPP++ V MA+
Sbjct: 305 GLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARM 364
Query: 197 LNNLFDIKWKSL 208
L ++F+ + +
Sbjct: 365 LQDVFETHFSKI 376
>gi|307182453|gb|EFN69688.1| Homeotic protein female sterile [Camponotus floridanus]
Length = 1541
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H + W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 439 CNDILKELFAKKHSSYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKAKMDNRQYKTAH 498
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF +DVRL F+N YNPP+++V MA++L ++F++++
Sbjct: 499 EFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRY 536
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+LK + H W F +PVD KL++PDY II KPMDLGT+K RL+ + Y E + D
Sbjct: 101 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDF 160
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPKAGLGK 223
F+N +YN P +V MAQ L LF K + E + VPK GK
Sbjct: 161 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEEVELDPPVPKGPKGK 213
>gi|28839607|gb|AAH47900.1| BRDT protein, partial [Homo sapiens]
Length = 463
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y+ + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 80 SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM---HPAGWVFNRPVDPVKL 136
++LP +++Q V K K+ + H CS ILK ++ W F PVD L
Sbjct: 252 NVLPDSQQQYNVV------KTVKVTEQLRH-CSEILKEMLAKKHFSYAWPFYNPVDVNAL 304
Query: 137 DIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQE 196
+ +Y+ ++ PMDLGT+K ++D Y + +F ADVRL F N YNPP++ V MA+
Sbjct: 305 GLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARM 364
Query: 197 LNNLFDIKWKSL 208
L ++F+ + +
Sbjct: 365 LQDVFETHFSKI 376
>gi|426230380|ref|XP_004009251.1| PREDICTED: bromodomain-containing protein 4 [Ovis aries]
Length = 1225
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 355 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 414
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 415 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 455
>gi|432094627|gb|ELK26133.1| Bromodomain-containing protein 2 [Myotis davidii]
Length = 881
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 148 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 207
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 208 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 257
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 415 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 467
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 468 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 527
Query: 199 NLFDIKWKSL 208
++F+ ++ +
Sbjct: 528 DVFEFRYAKM 537
>gi|156356469|ref|XP_001623945.1| predicted protein [Nematostella vectensis]
gi|156210690|gb|EDO31845.1| predicted protein [Nematostella vectensis]
Length = 467
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 7/131 (5%)
Query: 86 KRQAQEVIEGPKDKRPKMDRGVTHQ---CSVILKSLM---MHPAGWVFNRPVDPVKLDIP 139
K+ +++ EGP R K + +T Q CS ILK + + W F +PVD L +
Sbjct: 263 KKPNRDLPEGPSLSRGK-KKPLTEQLKYCSTILKDMFSKKHYAYAWPFYKPVDAEALGLH 321
Query: 140 DYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNN 199
DY II +PMD+ +K +L+ Y EF AD+RL FSN YNPP+++V KMA++L +
Sbjct: 322 DYHDIIKQPMDMTEIKNKLENRAYDSPSEFAADIRLMFSNCYRYNPPDHDVVKMARQLQD 381
Query: 200 LFDIKWKSLEE 210
+F++K+ + E
Sbjct: 382 VFEMKFAKMPE 392
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLM----MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P ++P T+Q +LK+++ H W F PVD VKL++PDY +II KPMDL
Sbjct: 4 PNPQQPAPKTRTTNQLQFLLKTVLKGLWRHHHAWPFREPVDAVKLNLPDYHTIIKKPMDL 63
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K +L+ N Y + E + D RL +N YN P +++ M Q ++ LF
Sbjct: 64 GTIKKKLENNEYPCAQECIEDFRLMINNCYTYNKPGDDIVLMCQSMDKLF 113
>gi|67967916|dbj|BAE00440.1| unnamed protein product [Macaca fascicularis]
Length = 609
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 269 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDN 328
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 329 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARRLQDVFETHFSKI 376
>gi|73959570|ref|XP_867048.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Canis
lupus familiaris]
Length = 668
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
++LK+L H W F +PVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 37 IVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEHKYYVRASECIED 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+ FSN LYN P +++ MAQ L LF
Sbjct: 97 FNIMFSNCYLYNKPGDDIVLMAQALEKLF 125
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 110 QCSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D Y +
Sbjct: 275 HCSEILKEMLAKKHLSYAWPFYNPVDVHALGLHNYYDIVKNPMDLGTIKGKMDNQEYKDA 334
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF ADVRL F N YNPP++ V MA+ L ++F++ +
Sbjct: 335 YEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHF 373
>gi|395822025|ref|XP_003784325.1| PREDICTED: bromodomain testis-specific protein [Otolemur garnettii]
Length = 928
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F PVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 37 VVLKALWKHSFSWPFQHPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+ FSN LYN P +++ MAQ L LF
Sbjct: 97 LNTMFSNCYLYNKPGDDIVLMAQALEKLF 125
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 272 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKHPMDLGTIKGKMDN 331
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
Y + EF ADVRL F N YNPP++ V MA+ L ++F++ +
Sbjct: 332 QEYKDAYEFAADVRLMFMNCYKYNPPDHEVVTMAKMLQDVFEMHF 376
>gi|431916886|gb|ELK16646.1| Bromodomain-containing protein 2 [Pteropus alecto]
Length = 833
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 95 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 154
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 155 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 214
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 215 EQELVVTIPK 224
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 78 RSSILPFNKRQAQEVIEGPKDKRP------------KMDRGVTHQCSVILKSLM--MHPA 123
+++ LP +R++ I+ P+ P K+ + H C+ ILK L+ H A
Sbjct: 340 KAARLPPMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAA 398
Query: 124 -GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN
Sbjct: 399 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK 458
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSLEE 210
YNPP+++V MA++L ++F+ ++ + +
Sbjct: 459 YNPPDHDVVAMARKLQDVFEFRYAKMPD 486
>gi|148708381|gb|EDL40328.1| bromodomain containing 4, isoform CRA_c [Mus musculus]
Length = 734
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 80 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 139
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 140 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 168
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 369 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 428
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 429 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 469
>gi|170036200|ref|XP_001845953.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878751|gb|EDS42134.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 848
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 107 VTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
+T+Q +LK++M H W F +PVD KL++PDY II +PMDLGTVK RL+ N
Sbjct: 57 LTNQLHFLLKTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTVKKRLENNY 116
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
Y S E + D + FSN +YN P +V MAQ L LF
Sbjct: 117 YWTSKEAIQDFNIMFSNCYVYNKPGEDVVVMAQTLEKLF 155
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 62 RSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM-- 119
R G++ IA +S+ P + Q + P + K+ + C+ ILK L
Sbjct: 369 RRESGRQEIAPF----QSASYPISPYQGSAAAQNPPKNKEKLSDAL-KSCNEILKELFSK 423
Query: 120 MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFS 178
H W F +PVD L + DY II KPMDLGTVK ++D Y ++EF ADVRL F+
Sbjct: 424 KHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYKSANEFAADVRLIFT 483
Query: 179 NAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
N YNPP+++V M ++L ++F+++ ++ ++ ++ +
Sbjct: 484 NCYKYNPPDHDVVAMGRKLQDVFEMRLANIPDEPANNI 521
>gi|3184498|gb|AAC27978.1| R31546_1 [Homo sapiens]
Length = 731
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 80 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 139
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 140 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 168
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 368 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 427
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 428 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 468
>gi|392352984|ref|XP_003751370.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
Length = 947
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD KL +PDY++II PMDL T+K RL+ Y + E V D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGD 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 97 FNTMFSNCYLYNKPGDDIVVMAQALEKLF 125
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 10/132 (7%)
Query: 80 SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMH---PAGWVFNRPVDPVKL 136
S+LP +++Q + + K K+ + H CS ILK ++ P W F PVD L
Sbjct: 251 SVLPDSQQQHRVL------KTVKVTEQLKH-CSEILKEMLAKKHLPYAWPFYNPVDVDAL 303
Query: 137 DIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQE 196
+ +Y+ I+ PMDLGT+K ++D+ Y + EF ADVRL F N YNPP++ V MA+
Sbjct: 304 GLHNYYDIVKNPMDLGTIKGKMDKQEYKDACEFAADVRLMFMNCYKYNPPDHEVVTMARM 363
Query: 197 LNNLFDIKWKSL 208
L ++F++ + +
Sbjct: 364 LQDVFEMHFAKI 375
>gi|426020760|sp|D4A7T3.1|BRDT_RAT RecName: Full=Bromodomain testis-specific protein
Length = 952
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD KL +PDY++II PMDL T+K RL+ Y + E V D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGD 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 97 FNTMFSNCYLYNKPGDDIVVMAQALEKLF 125
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 10/132 (7%)
Query: 80 SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMH---PAGWVFNRPVDPVKL 136
S+LP +++Q + + K K+ + H CS ILK ++ P W F PVD L
Sbjct: 251 SVLPDSQQQHRVL------KTVKVTEQLKH-CSEILKEMLAKKHLPYAWPFYNPVDVDAL 303
Query: 137 DIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQE 196
+ +Y+ I+ PMDLGT+K ++D+ Y + EF ADVRL F N YNPP++ V MA+
Sbjct: 304 GLHNYYDIVKNPMDLGTIKGKMDKQEYKDACEFAADVRLMFMNCYKYNPPDHEVVTMARM 363
Query: 197 LNNLFDIKWKSL 208
L ++F++ + +
Sbjct: 364 LQDVFEMHFAKI 375
>gi|397620029|gb|EJK65508.1| hypothetical protein THAOC_13619 [Thalassiosira oceanica]
Length = 225
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 110 QCSVILKSLMMHP-AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDE 168
QC I+ L+ P A +F +PVDPV+L +P YF + KPMDLGT+ +L R +Y +
Sbjct: 67 QCLRIVNFLLEQPIAAELFGKPVDPVELKLPTYFDDVKKPMDLGTISKKLTRGIYQSIGD 126
Query: 169 FVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F +D+ LTF NA+L+N ++ V K+AQ L N F+ K+K +
Sbjct: 127 FESDMHLTFDNAILFNGKDHFVSKLAQNLKNTFEDKYKQM 166
>gi|397569150|gb|EJK46566.1| hypothetical protein THAOC_34760 [Thalassiosira oceanica]
Length = 229
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 110 QCSVILKSLMMHP-AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDE 168
QC I+ L+ P A +F +PVDPV+L +P YF + KPMDLGT+ +L R +Y +
Sbjct: 71 QCLRIVNFLLEQPIAAELFGKPVDPVELKLPTYFDDVKKPMDLGTISKKLTRGIYQSIGD 130
Query: 169 FVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F +D+ LTF NA+L+N ++ V K+AQ L N F+ K+K +
Sbjct: 131 FESDMHLTFDNAILFNGKDHFVSKLAQNLKNTFEDKYKQM 170
>gi|149034726|gb|EDL89463.1| bromodomain containing 4, isoform CRA_b [Rattus norvegicus]
Length = 723
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
>gi|392332962|ref|XP_003752750.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
gi|149028625|gb|EDL83966.1| bromodomain, testis-specific [Rattus norvegicus]
Length = 947
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD KL +PDY++II PMDL T+K RL+ Y + E V D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGD 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 97 FNTMFSNCYLYNKPGDDIVVMAQALEKLF 125
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 10/132 (7%)
Query: 80 SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMH---PAGWVFNRPVDPVKL 136
S+LP +++Q + + K K+ + H CS ILK ++ P W F PVD L
Sbjct: 251 SVLPDSQQQHRVL------KTVKVTEQLKH-CSEILKEMLAKKHLPYAWPFYNPVDVDAL 303
Query: 137 DIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQE 196
+ +Y+ I+ PMDLGT+K ++D+ Y + EF ADVRL F N YNPP++ V MA+
Sbjct: 304 GLHNYYDIVKNPMDLGTIKGKMDKQEYKDACEFAADVRLMFMNCYKYNPPDHEVVTMARM 363
Query: 197 LNNLFDIKWKSL 208
L ++F++ + +
Sbjct: 364 LQDVFEMHFAKI 375
>gi|440293462|gb|ELP86579.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 275
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 58/98 (59%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C I + LM G FN PVDPV L +P Y ++I PMDLGT+K +L Y+ DEF
Sbjct: 8 KCKDINRKLMSQDEGVAFNTPVDPVALRVPTYPTVIKYPMDLGTIKRKLGDKKYTTKDEF 67
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
DV LTF +A+ +N PE+ VH A +L LF W +
Sbjct: 68 YMDVILTFQDAIYFNHPESEVHHWAVKLEGLFLKLWTT 105
>gi|383417065|gb|AFH31746.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
gi|387541550|gb|AFJ71402.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
Length = 721
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|226246640|ref|NP_932762.2| bromodomain-containing protein 4 isoform 2 [Mus musculus]
gi|148708380|gb|EDL40327.1| bromodomain containing 4, isoform CRA_b [Mus musculus]
gi|187951219|gb|AAI38836.1| Bromodomain containing 4 [Mus musculus]
gi|187952057|gb|AAI38835.1| Bromodomain containing 4 [Mus musculus]
Length = 723
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
>gi|7657218|ref|NP_055114.1| bromodomain-containing protein 4 isoform short [Homo sapiens]
gi|3115204|emb|CAA72780.1| HUNKI [Homo sapiens]
gi|119604875|gb|EAW84469.1| bromodomain containing 4, isoform CRA_a [Homo sapiens]
gi|410224242|gb|JAA09340.1| bromodomain containing 4 [Pan troglodytes]
gi|410259614|gb|JAA17773.1| bromodomain containing 4 [Pan troglodytes]
gi|410299992|gb|JAA28596.1| bromodomain containing 4 [Pan troglodytes]
Length = 722
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|344239383|gb|EGV95486.1| Bromodomain-containing protein 4 [Cricetulus griseus]
Length = 723
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CSVILK + H + W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSVILKEMFTKKHASYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L +F++++ +
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQEVFEMRFAKM 458
>gi|18308127|gb|AAL67834.1|AF461396_1 bromodomain-containing protein BRD4 short variant [Mus musculus]
Length = 723
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
>gi|332253608|ref|XP_003275929.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Nomascus
leucogenys]
Length = 722
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|363747028|ref|XP_003643891.1| PREDICTED: bromodomain-containing protein 4-like [Gallus gallus]
Length = 1354
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 87 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 146
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 147 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 175
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS I+K + H A W F +PVD L + DY II PMDL T+K++L+ Y +
Sbjct: 372 CSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQ 431
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNP ++ V MA++L ++F++++ +
Sbjct: 432 EFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKM 472
>gi|327264790|ref|XP_003217194.1| PREDICTED: bromodomain-containing protein 4-like [Anolis
carolinensis]
Length = 1344
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%)
Query: 102 KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
+M + + V+LK+L H W F +PVD VKL +PDY+ II PMD+GT+K RL+ N
Sbjct: 58 RMTNQLQYLLKVVLKTLWKHQFSWPFQQPVDAVKLQLPDYYKIIKTPMDMGTIKKRLENN 117
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
Y + E + D F+N +YN P +++ MA+ L LF
Sbjct: 118 YYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS I+K + H A W F +PVD L + DY II PMDL T+K++L+ Y +
Sbjct: 359 CSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYRDIIKHPMDLSTIKSKLENRDYRDAQ 418
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 419 EFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 459
>gi|354485151|ref|XP_003504747.1| PREDICTED: bromodomain-containing protein 4 [Cricetulus griseus]
Length = 721
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CSVILK + H + W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSVILKEMFTKKHASYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L +F++++ +
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQEVFEMRFAKM 458
>gi|291398522|ref|XP_002715912.1| PREDICTED: Bromodomain testis-specific protein-like [Oryctolagus
cuniculus]
Length = 953
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKSPMDLNTIKKRLENKYYVKASECIED 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 97 FNTMFSNCYLYNKPGDDIVLMAQTLEKLF 125
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 107 VTHQ---CSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ P W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 266 VTEQLRHCSEILKEMLAKKHLPYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMDS 325
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
+ Y + EF ADVRL F N YNPP++ V MA+ L ++F++ + + + VP
Sbjct: 326 HQYKDACEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMHFARIPDDPIEHVP 382
>gi|66800045|ref|XP_628948.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
gi|74896738|sp|Q54BA2.1|Y3800_DICDI RecName: Full=Ankyrin repeat, bromo and BTB domain-containing
protein DDB_G0293800
gi|60462310|gb|EAL60533.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
Length = 806
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 56/95 (58%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C ++ + F RPVDP+ IPDYF +I PMDLGT+K +LD N YS +F
Sbjct: 525 CKGLINGMFKKKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFA 584
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
ADVRL F NA+ YN + V K A+ L N FD K+
Sbjct: 585 ADVRLMFENALTYNADSSPVWKHAKTLLNAFDQKF 619
>gi|351702676|gb|EHB05595.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 722
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 3 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 62
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 63 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 114
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 263 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 321
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 322 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 374
>gi|47210026|emb|CAF90901.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1594
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+LKSL H W F PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 467 VLKSLWKHHFAWPFQAPVDAVKLNLPDYYKIIKTPMDMGTIKRRLENNYYWNAQECIHDF 526
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--EEKWSSEVPKAGLG 222
F+N +YN P +++ MA+ L +F K + EEK + VPK G
Sbjct: 527 NTMFTNCYIYNKPGDDIVLMAEALEKVFLQKITEMPQEEKEIAVVPKGRRG 577
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F +PVD L + DY+ II PMDL T+K ++D Y + EF ADVRL FSN Y
Sbjct: 764 AWPFYKPVDVTSLGLHDYYDIIKHPMDLSTIKKKMDSRQYRDAQEFAADVRLMFSNCYKY 823
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVNDTRQNCP 240
NPP+++V MA+ L ++F++++ + + VP S ++ TRQ P
Sbjct: 824 NPPDHDVVSMARNLQDVFEMRFAKMPDDPEEAVPVP----TPSSALLPAPSTRQVPP 876
>gi|426225993|ref|XP_004007141.1| PREDICTED: uncharacterized protein LOC101109872 [Ovis aries]
Length = 589
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMME 231
D F+N +YN P +++ MAQ L +F K + ++ +P A GK G+
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK---GRKPS 160
Query: 232 VNDTRQNCPKTP 243
CP+ P
Sbjct: 161 SGTQSAGCPRRP 172
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 38/59 (64%)
Query: 153 TVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
++ ++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 331 VLQKKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 389
>gi|148676419|gb|EDL08366.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
gi|148676420|gb|EDL08367.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
Length = 731
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 48 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 107
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 108 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 159
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 308 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 366
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 367 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 419
>gi|114326383|ref|NP_001041552.1| bromodomain-containing protein 2 [Canis lupus familiaris]
gi|62899715|sp|Q5TJG6.1|BRD2_CANFA RecName: Full=Bromodomain-containing protein 2
gi|55956582|emb|CAI11405.1| bromodomain-containing protein 2 [Canis lupus familiaris]
Length = 803
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|40788944|dbj|BAA05393.2| KIAA0043 [Homo sapiens]
Length = 731
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 49 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 108
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 109 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 160
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 320 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 379
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 380 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 420
>gi|354501565|ref|XP_003512861.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Cricetulus
griseus]
Length = 744
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 304 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 362
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 363 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|326925069|ref|XP_003208744.1| PREDICTED: bromodomain testis-specific protein-like [Meleagris
gallopavo]
Length = 824
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+++++ H W F++PVD L++PDY+SII KPMDL T+K RL+ N Y+ + E + D
Sbjct: 38 VVMRAMWRHNFSWPFHQPVDAAALNLPDYYSIIKKPMDLSTIKKRLEHNYYTKAAECIDD 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+ F N +YN P +++ MAQEL +F
Sbjct: 98 FKTMFLNCYIYNKPGDDIVFMAQELEKVF 126
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK + H A W F + D V + + I P DLGT+K ++D Y
Sbjct: 287 CNEILKEMFSKKHSAYAWPFLKSADVVSFSLGEKKGITKCPADLGTIKKKMDNFEYRDIQ 346
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF DVRL F N +N P++ V MA++L ++F+ + + ++ ++ V
Sbjct: 347 EFATDVRLMFMNCYKHNSPDHEVVAMAKKLQDVFETHFAKIPDEPATSV 395
>gi|149732108|ref|XP_001496282.1| PREDICTED: bromodomain-containing protein 2-like [Equus caballus]
Length = 804
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 78 RSSILPFNKRQAQEVIEGPKDKRP------------KMDRGVTHQCSVILKSLM--MHPA 123
+++ LP +R++ I+ P+ P K+ + H C+ ILK L+ H A
Sbjct: 309 KAARLPPTRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAA 367
Query: 124 -GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK 427
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSLEE 210
YNPP+++V MA++L ++F+ ++ + +
Sbjct: 428 YNPPDHDVVAMARKLQDVFEFRYAKMPD 455
>gi|194225997|ref|XP_001917930.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 3
[Equus caballus]
Length = 728
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C ILK ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 304 KKGKLSEHLRH-CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 362
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 363 KKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|116003963|ref|NP_001070341.1| bromodomain-containing protein 3 [Bos taurus]
gi|115305162|gb|AAI23579.1| Bromodomain containing 3 [Bos taurus]
Length = 722
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 110 QCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C ILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 314 HCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYPDA 373
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 374 QGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|73967596|ref|XP_858014.1| PREDICTED: bromodomain-containing protein 3 isoform 3 [Canis lupus
familiaris]
Length = 728
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C ILK ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 304 KKGKLSEHLRH-CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 362
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 363 KKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|440906896|gb|ELR57110.1| Bromodomain testis-specific protein [Bos grunniens mutus]
Length = 964
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKNPMDLNTIKKRLEHKYYVKASECIED 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 97 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 125
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK ++ H + W F PVD L + +Y+ I+ PMDLGT+K ++D Y +
Sbjct: 275 CSEILKEMLGKKHLSYAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIKAKMDNQEYKDAY 334
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
EF ADVRL F N YNPP++ V MA+ L ++F++ + + ++ +P
Sbjct: 335 EFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKIPDEPVESMP 384
>gi|344298832|ref|XP_003421095.1| PREDICTED: bromodomain-containing protein 2 [Loxodonta africana]
Length = 798
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|410950660|ref|XP_003982021.1| PREDICTED: bromodomain-containing protein 4 [Felis catus]
Length = 720
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|402896155|ref|XP_003911172.1| PREDICTED: bromodomain-containing protein 3 [Papio anubis]
Length = 726
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 375 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|444519083|gb|ELV12566.1| Bromodomain-containing protein 2 [Tupaia chinensis]
Length = 743
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 67 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 126
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 127 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 176
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 271 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 323
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 324 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 383
Query: 199 NLFDIKWKSL 208
++F+ ++ +
Sbjct: 384 DVFEFRYAKM 393
>gi|380792783|gb|AFE68267.1| bromodomain-containing protein 4 isoform short, partial [Macaca
mulatta]
Length = 553
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
>gi|165972335|ref|NP_001107046.1| bromodomain-containing protein 3 isoform 1 [Mus musculus]
gi|62485072|dbj|BAD91008.2| Orfx [Mus musculus]
gi|148676418|gb|EDL08365.1| bromodomain containing 3, isoform CRA_a [Mus musculus]
Length = 743
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 43 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 102
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 103 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 154
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 303 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 361
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 362 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
>gi|351711490|gb|EHB14409.1| Bromodomain-containing protein 4 [Heterocephalus glaber]
Length = 1225
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 103 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 162
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 163 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 191
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 368 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 427
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 428 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 468
>gi|45501005|gb|AAH67129.1| BRD4 protein, partial [Homo sapiens]
gi|116283901|gb|AAH47888.1| BRD4 protein [Homo sapiens]
Length = 548
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
>gi|60649450|gb|AAH91649.1| BRD4 protein, partial [Homo sapiens]
Length = 550
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
>gi|116283228|gb|AAH00156.1| BRD4 protein [Homo sapiens]
gi|116283846|gb|AAH38988.1| BRD4 protein [Homo sapiens]
Length = 549
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
>gi|33879612|gb|AAH30158.1| BRD4 protein, partial [Homo sapiens]
Length = 548
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
>gi|71681018|gb|AAI00642.1| Brd4 protein, partial [Rattus norvegicus]
Length = 566
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 461
>gi|410958884|ref|XP_003986043.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Felis catus]
gi|410958886|ref|XP_003986044.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Felis catus]
Length = 804
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|355673426|gb|AER95168.1| bromodomain containing 4 [Mustela putorius furo]
Length = 551
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 79 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 138
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 139 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 167
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 367 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 426
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 427 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 467
>gi|354480438|ref|XP_003502414.1| PREDICTED: bromodomain testis-specific protein-like [Cricetulus
griseus]
Length = 839
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYVKASECIED 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 97 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 125
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D Y +
Sbjct: 275 CSEILKEMLAKKHLSYAWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMDNQEYKDAY 334
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF ADVRL F N YNPP++ V MA+ L ++F++ +
Sbjct: 335 EFAADVRLMFMNCYKYNPPDHEVVSMARMLQDVFEMHF 372
>gi|403261524|ref|XP_003923168.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 800
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|354501563|ref|XP_003512860.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Cricetulus
griseus]
gi|344252302|gb|EGW08406.1| Bromodomain-containing protein 3 [Cricetulus griseus]
Length = 727
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 304 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 362
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 363 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|395844316|ref|XP_003794908.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Otolemur
garnettii]
Length = 726
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 375 GFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|157126758|ref|XP_001654739.1| hypothetical protein AaeL_AAEL002090 [Aedes aegypti]
gi|108882525|gb|EAT46750.1| AAEL002090-PA, partial [Aedes aegypti]
Length = 506
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 62 RSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGV-THQCSVILKSLM- 119
R G+++I E +S P + Q + P PK R C+ ILK L
Sbjct: 279 RRESGRQVIRKEIPPFPASTYPISPYQGSGAAQNP----PKTKRSFRMRSCNEILKELFS 334
Query: 120 -MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTF 177
H W F +PVD L + DY II KPMDLGTVK ++D Y ++EF ADVRL F
Sbjct: 335 KKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYKSANEFAADVRLIF 394
Query: 178 SNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
+N YNPP+++V M ++L ++F+++ ++ +
Sbjct: 395 TNCYKYNPPDHDVVAMGRKLQDVFEMRLANIPD 427
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 107 VTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
+T+Q +LK++M H W F +PVD KL++PDY II +PMDLGT+K RL+ N
Sbjct: 13 LTNQLHFLLKTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNY 72
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
Y S E + D + FSN +YN P +V MAQ L LF
Sbjct: 73 YWTSKESIQDFNIMFSNCYVYNKPGEDVVVMAQALEKLF 111
>gi|74354344|gb|AAI03774.1| Brd4 protein, partial [Mus musculus]
Length = 557
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 461
>gi|74181884|dbj|BAE32643.1| unnamed protein product [Mus musculus]
Length = 545
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 461
>gi|301757117|ref|XP_002914388.1| PREDICTED: bromodomain-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 803
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|296197845|ref|XP_002746465.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Callithrix
jacchus]
Length = 800
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|426218805|ref|XP_004003627.1| PREDICTED: bromodomain testis-specific protein [Ovis aries]
Length = 969
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 72 VVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKNPMDLNTIKKRLEHKYYVKASECIED 131
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 132 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 160
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 10/141 (7%)
Query: 80 SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKL 136
++LP +++Q + V K K+ + H CS ILK ++ H + W F PVD L
Sbjct: 286 NVLPDSQQQYKVV------KNAKVTEQLRH-CSEILKEMLGKKHLSYAWPFYNPVDVNAL 338
Query: 137 DIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQE 196
+ +Y+ I+ PMDLGT+K ++D Y + EF ADVRL F N YNPP++ V MA+
Sbjct: 339 GLHNYYDIVKTPMDLGTIKAKMDNQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARM 398
Query: 197 LNNLFDIKWKSLEEKWSSEVP 217
L ++F++ + + ++ +P
Sbjct: 399 LQDVFEVHFAKIPDEPVESMP 419
>gi|426250128|ref|XP_004018790.1| PREDICTED: bromodomain-containing protein 2 [Ovis aries]
Length = 803
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|426363503|ref|XP_004048879.1| PREDICTED: bromodomain-containing protein 3 [Gorilla gorilla
gorilla]
Length = 726
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
+ + +V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y +
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
E + D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 375 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|194897170|ref|XP_001978604.1| GG17589 [Drosophila erecta]
gi|190650253|gb|EDV47531.1| GG17589 [Drosophila erecta]
Length = 2024
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 481 CNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 540
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++ ++
Sbjct: 541 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 584
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P +RP + T+Q ++K++M H W F +PVD KL++PDY II +PMD+
Sbjct: 27 PPAERPGRN---TNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDM 83
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
GT+K RL+ N Y + E + D F+N +YN P +V MAQ L +F K +S+
Sbjct: 84 GTIKKRLENNYYWSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 140
>gi|195480258|ref|XP_002101200.1| GE17489 [Drosophila yakuba]
gi|194188724|gb|EDX02308.1| GE17489 [Drosophila yakuba]
Length = 2036
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 483 CNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 542
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++ ++
Sbjct: 543 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 586
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P +RP + T+Q ++K++M H W F +PVD KL++PDY II +PMD+
Sbjct: 27 PPAERPGRN---TNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDM 83
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
GT+K RL+ N Y + E + D F+N +YN P +V MAQ L +F K +S+
Sbjct: 84 GTIKKRLENNYYWSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 140
>gi|119624070|gb|EAX03665.1| bromodomain containing 2, isoform CRA_c [Homo sapiens]
Length = 552
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 110 QCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ ILK L+ H A W F +PVD L + DY II PMDL TVK +++ Y +
Sbjct: 246 HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDA 305
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQEL 197
EF ADVRL FSN YNPP+++V MA++L
Sbjct: 306 QEFAADVRLMFSNCYKYNPPDHDVVAMARKL 336
>gi|11067749|ref|NP_031397.1| bromodomain-containing protein 3 [Homo sapiens]
gi|12643726|sp|Q15059.1|BRD3_HUMAN RecName: Full=Bromodomain-containing protein 3; AltName:
Full=RING3-like protein
gi|46241518|gb|AAS82952.1| endothelial differentiation inhibitory protein D18 [Homo sapiens]
gi|119608519|gb|EAW88113.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|119608521|gb|EAW88115.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|168274318|dbj|BAG09579.1| bromodomain-containing protein 3 [synthetic construct]
Length = 726
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 375 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|114052340|ref|NP_001039331.1| bromodomain-containing protein 2 [Bos taurus]
gi|108935958|sp|Q32S26.1|BRD2_BOVIN RecName: Full=Bromodomain-containing protein 2
gi|63169167|gb|AAY34703.1| bromodomain containing 2 [Bos taurus]
gi|296474561|tpg|DAA16676.1| TPA: bromodomain-containing protein 2 [Bos taurus]
Length = 803
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|417404705|gb|JAA49093.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 799
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|397503778|ref|XP_003822496.1| PREDICTED: bromodomain-containing protein 3 [Pan paniscus]
Length = 728
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 375 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|355752948|gb|EHH56994.1| hypothetical protein EGM_06545 [Macaca fascicularis]
Length = 726
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 375 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|297685659|ref|XP_002820401.1| PREDICTED: bromodomain-containing protein 3 [Pongo abelii]
Length = 726
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
+ + +V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y +
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
E + D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 375 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|114627431|ref|XP_001170358.1| PREDICTED: bromodomain-containing protein 3 isoform 8 [Pan
troglodytes]
gi|410223876|gb|JAA09157.1| bromodomain containing 3 [Pan troglodytes]
gi|410253994|gb|JAA14964.1| bromodomain containing 3 [Pan troglodytes]
gi|410301574|gb|JAA29387.1| bromodomain containing 3 [Pan troglodytes]
gi|410339465|gb|JAA38679.1| bromodomain containing 3 [Pan troglodytes]
Length = 726
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 375 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|403344522|gb|EJY71608.1| Bromodomain-containing protein [Oxytricha trifallax]
Length = 797
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 61/95 (64%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++ +L H W+F+ PVDP+KL+IPDY+ II PMDL VKT+L+ N Y+ ++F+ DV
Sbjct: 697 LVNTLWKHQNSWIFHEPVDPIKLNIPDYYDIIKNPMDLSQVKTKLNNNEYTKINDFLYDV 756
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+L F N +LYN V +M + + + F ++ L
Sbjct: 757 QLIFDNCLLYNGDSTQVSQMCKSVRDEFQKQYHIL 791
>gi|52350614|gb|AAH82782.1| Brd4 protein, partial [Mus musculus]
Length = 582
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 461
>gi|332255339|ref|XP_003276790.1| PREDICTED: bromodomain-containing protein 3 [Nomascus leucogenys]
Length = 726
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 375 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|21594631|gb|AAH31536.1| Bromodomain containing 3 [Mus musculus]
Length = 726
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 43 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 102
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 103 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 154
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 303 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 361
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 362 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
>gi|165972331|ref|NP_001107045.1| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|165972333|ref|NP_075825.3| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|47115837|sp|Q8K2F0.2|BRD3_MOUSE RecName: Full=Bromodomain-containing protein 3; AltName:
Full=Bromodomain-containing FSH-like protein FSRG2
gi|74141421|dbj|BAE35988.1| unnamed protein product [Mus musculus]
gi|74195657|dbj|BAE39636.1| unnamed protein product [Mus musculus]
gi|74204674|dbj|BAE35406.1| unnamed protein product [Mus musculus]
gi|148676422|gb|EDL08369.1| bromodomain containing 3, isoform CRA_d [Mus musculus]
Length = 726
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 43 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 102
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 103 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 154
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 303 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 361
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 362 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
>gi|178057339|ref|NP_001116557.1| bromodomain-containing protein 2 [Sus scrofa]
gi|147223324|emb|CAN13285.1| bromodomain containing 2 [Sus scrofa]
Length = 803
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|302564433|ref|NP_001181047.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|355567354|gb|EHH23695.1| hypothetical protein EGK_07225 [Macaca mulatta]
gi|383421773|gb|AFH34100.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|384949538|gb|AFI38374.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|387542198|gb|AFJ71726.1| bromodomain-containing protein 3 [Macaca mulatta]
Length = 726
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 375 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|348552081|ref|XP_003461857.1| PREDICTED: bromodomain-containing protein 4-like [Cavia porcellus]
Length = 1373
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|194223682|ref|XP_001914731.1| PREDICTED: bromodomain-containing protein 4 [Equus caballus]
Length = 1364
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|47059183|ref|NP_997660.1| bromodomain-containing protein 2 [Rattus norvegicus]
gi|392355205|ref|XP_003751971.1| PREDICTED: bromodomain-containing protein 2-like [Rattus
norvegicus]
gi|81872356|sp|Q6MGA9.1|BRD2_RAT RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Protein RING3
gi|46237556|emb|CAE83937.1| bromodomain-containing 2 [Rattus norvegicus]
gi|149043366|gb|EDL96817.1| bromodomain containing 2, isoform CRA_b [Rattus norvegicus]
Length = 798
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 122
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 123 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 182
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 183 EQELVVTIPK 192
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 330 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 382
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 383 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 442
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 443 DVFEFRYAKMPD 454
>gi|403308909|ref|XP_003944882.1| PREDICTED: bromodomain-containing protein 4 [Saimiri boliviensis
boliviensis]
Length = 1334
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 93 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 152
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 153 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 181
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 381 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 440
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++ V
Sbjct: 441 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPV 489
>gi|395844318|ref|XP_003794909.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Otolemur
garnettii]
Length = 743
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
+ + +V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y +
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
E + D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 375 GFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|350597125|ref|XP_003484360.1| PREDICTED: bromodomain-containing protein 3 [Sus scrofa]
Length = 726
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 110 QCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 314 HCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYPDA 373
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 374 QGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|354487577|ref|XP_003505948.1| PREDICTED: bromodomain-containing protein 2-like [Cricetulus
griseus]
gi|344253000|gb|EGW09104.1| Bromodomain-containing protein 2 [Cricetulus griseus]
Length = 752
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 77 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 137 EQELVVTIPK 146
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 284 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 336
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 337 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVVMARKLQ 396
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 397 DVFEFRYAKMPD 408
>gi|198469092|ref|XP_002134216.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
gi|198146712|gb|EDY72843.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
Length = 1981
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 490 CNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 549
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++ ++
Sbjct: 550 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 593
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 108 THQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
T+Q ++K++M H W F +PVD KL++PDY II +PMD+GT+K RL+ N Y
Sbjct: 36 TNQLQFLIKTVMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYY 95
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+ E + D F+N +YN P +V MAQ L +F K +++
Sbjct: 96 WSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIETM 140
>gi|213512228|ref|NP_001094373.1| bromodomain containing 4 [Rattus norvegicus]
Length = 1403
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++ V
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPV 466
>gi|242009661|ref|XP_002425601.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
gi|212509494|gb|EEB12863.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
Length = 803
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMMHP-AG--WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L AG W F +PVD L + DY II KPMDLGTVKT++D Y +
Sbjct: 356 CNEILKELFSRKHAGYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKTKMDNRQYRTAS 415
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL F+N YNP ++V MA++L ++F++++ +
Sbjct: 416 EFAADVRLIFTNCYKYNPSTHDVVAMARKLQDVFEMRYAKI 456
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K++ H W PVD KL++PDY II +PMDL T+K RL+ N Y + E + D
Sbjct: 64 VIKAVCAHKYAWPLLEPVDAKKLNLPDYHRIIKQPMDLTTIKKRLENNYYWNAKECIQDF 123
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--EEKWSSEVPKAGLG 222
F+N +YN P+ +V MAQ + LF K +L EE VP G G
Sbjct: 124 NTMFTNCYVYNQPQEDVVVMAQIVEKLFLTKISTLPKEEIELEPVPPKGKG 174
>gi|126297864|ref|XP_001365890.1| PREDICTED: bromodomain-containing protein 3 [Monodelphis domestica]
Length = 724
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 151
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 311 CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQDAQ 370
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 371 GFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
>gi|291396003|ref|XP_002714557.1| PREDICTED: bromodomain containing 2 [Oryctolagus cuniculus]
Length = 802
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|166851651|gb|ABY91321.1| RING3 [Sus scrofa]
Length = 756
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 77 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 137 EQELVVTIPK 146
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 284 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 336
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 337 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 396
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 397 DVFEFRYAKMPD 408
>gi|402904600|ref|XP_003915131.1| PREDICTED: bromodomain-containing protein 4 [Papio anubis]
Length = 1300
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|226342873|ref|NP_065254.3| bromodomain-containing protein 4 isoform 1 [Mus musculus]
gi|148708379|gb|EDL40326.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
gi|148708382|gb|EDL40329.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
Length = 1400
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++ V
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPV 466
>gi|440909604|gb|ELR59493.1| Bromodomain-containing protein 2 [Bos grunniens mutus]
Length = 810
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|18308125|gb|AAL67833.1|AF461395_1 bromodomain-containing protein BRD4 long variant [Mus musculus]
Length = 1400
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++ V
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPV 466
>gi|8575733|gb|AAF78072.1| bromodomain-containing FSH-like protein FSRG2 [Mus musculus]
gi|46241516|gb|AAS82951.1| endothelial differentiation inhibitory protein D18 [Mus musculus]
Length = 726
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 43 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 102
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 103 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 154
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 303 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 361
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 362 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
>gi|348670161|gb|EGZ09983.1| hypothetical protein PHYSODRAFT_460736 [Phytophthora sojae]
Length = 924
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L LM GW FN PVDPV+ +IPDYF II PMDLGT+K RL+ Y+ + F DV
Sbjct: 120 LLTKLMDSEYGWTFNNPVDPVQWNIPDYFDIIKCPMDLGTIKKRLEAEHYNSVEAFAGDV 179
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPK 218
RL F N + YN N + A++L F+ SL+ + ++ K
Sbjct: 180 RLVFENCIAYNSSTNKFNIAAKQLLASFNKSLASLKNQLEKQLFK 224
>gi|321456065|gb|EFX67182.1| hypothetical protein DAPPUDRAFT_302185 [Daphnia pulex]
Length = 754
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 87/164 (53%), Gaps = 21/164 (12%)
Query: 60 PYRSSGGKKM-----IASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMD-------RGV 107
PY S GG + +A S+ S RQ ++V++ D P+ R
Sbjct: 299 PYDSPGGMVLHSAGKVAKISSRRESG------RQIKKVVKDLPDTLPQHHSKPRDKLRES 352
Query: 108 THQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYS 164
T C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y
Sbjct: 353 TKACNEILKELFSKKHSGYAWPFYKPVDAGLLGLHDYHDIIKKPMDLGTVKAKMDGREYR 412
Query: 165 VSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+ EF +DVR+ F+N YNPP+++V MA++L ++F++++ +
Sbjct: 413 SAAEFASDVRMIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 456
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
++K++ H W F++PVD KL +PDYF II PMDLGTVK RL+ N Y + E + D
Sbjct: 87 FVMKAVWKHSFAWPFHQPVDAKKLGLPDYFKIIKYPMDLGTVKKRLENNYYWSAKECIQD 146
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +V MAQ L LF
Sbjct: 147 FNTMFTNCYVYNKPGEDVVLMAQTLEKLF 175
>gi|297703913|ref|XP_002828869.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Pongo
abelii]
Length = 1363
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|313747417|ref|NP_001186384.1| bromodomain-containing protein 2 isoform 2 [Homo sapiens]
gi|39645317|gb|AAH63840.1| BRD2 protein [Homo sapiens]
Length = 836
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|345306075|ref|XP_001505872.2| PREDICTED: bromodomain-containing protein 3 [Ornithorhynchus
anatinus]
Length = 724
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 151
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 311 CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQDAQ 370
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 371 GFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
>gi|60360108|dbj|BAD90273.1| mKIAA4005 protein [Mus musculus]
Length = 818
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 83 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 142
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 143 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 202
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 203 EQELVVTIPK 212
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 350 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 402
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 403 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 462
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 463 DVFEFRYAKMPD 474
>gi|74184776|dbj|BAE27987.1| unnamed protein product [Mus musculus]
Length = 1401
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 359 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 418
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++ V
Sbjct: 419 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPV 467
>gi|50400639|sp|Q9ESU6.1|BRD4_MOUSE RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Mitotic chromosome-associated protein; Short=MCAP
gi|9931486|gb|AAG02191.1|AF273217_1 cell proliferation related protein CAP [Mus musculus]
Length = 1400
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 358 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++ V
Sbjct: 418 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPV 466
>gi|149039214|gb|EDL93434.1| bromodomain containing 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197246453|gb|AAI68949.1| Brd3 protein [Rattus norvegicus]
Length = 742
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 304 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 362
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ + ++ E
Sbjct: 363 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE-PME 421
Query: 216 VP 217
VP
Sbjct: 422 VP 423
>gi|109070687|ref|XP_001115845.1| PREDICTED: hypothetical protein LOC717893 isoform 7 [Macaca
mulatta]
gi|109070689|ref|XP_001115854.1| PREDICTED: hypothetical protein LOC717893 isoform 8 [Macaca
mulatta]
Length = 802
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|410053415|ref|XP_512452.4| PREDICTED: bromodomain-containing protein 4 [Pan troglodytes]
Length = 1161
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++ V
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPV 465
>gi|397474356|ref|XP_003808648.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Pan paniscus]
Length = 800
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|332253606|ref|XP_003275928.1| PREDICTED: bromodomain-containing protein 4 isoform 1 [Nomascus
leucogenys]
Length = 1364
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|114606772|ref|XP_001168005.1| PREDICTED: bromodomain-containing protein 2 isoform 10 [Pan
troglodytes]
gi|114606774|ref|XP_001168036.1| PREDICTED: bromodomain-containing protein 2 isoform 11 [Pan
troglodytes]
gi|410213772|gb|JAA04105.1| bromodomain containing 2 [Pan troglodytes]
gi|410213774|gb|JAA04106.1| bromodomain containing 2 [Pan troglodytes]
gi|410267650|gb|JAA21791.1| bromodomain containing 2 [Pan troglodytes]
gi|410267652|gb|JAA21792.1| bromodomain containing 2 [Pan troglodytes]
gi|410303978|gb|JAA30589.1| bromodomain containing 2 [Pan troglodytes]
gi|410303980|gb|JAA30590.1| bromodomain containing 2 [Pan troglodytes]
gi|410354717|gb|JAA43962.1| bromodomain containing 2 [Pan troglodytes]
gi|410354719|gb|JAA43963.1| bromodomain containing 2 [Pan troglodytes]
Length = 800
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|114606788|ref|XP_001167666.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pan
troglodytes]
Length = 753
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 77 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 137 EQELVVTIPK 146
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 284 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 336
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 337 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 396
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 397 DVFEFRYAKMPD 408
>gi|327290160|ref|XP_003229792.1| PREDICTED: bromodomain-containing protein 2-like [Anolis
carolinensis]
Length = 794
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 61 PEVANPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 120
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y S E + D F+N +YN P +++ MAQ L +F
Sbjct: 121 GTIKRRLENNYYWSSAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 170
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
KR K+ + + C+ ILK L+ H A W F +PVD L + DY II PMDL T+K
Sbjct: 348 KRGKLSEQLKY-CNGILKELVSKKHAAYAWPFYKPVDASALGLHDYHEIIKYPMDLSTIK 406
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
+++ Y + EF +DVRL FSN YNPP+++V MA++L ++F+ + + ++ +
Sbjct: 407 RKMENRDYRDAQEFASDVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPVNR 466
Query: 216 VPKAG 220
P +G
Sbjct: 467 SPPSG 471
>gi|281343180|gb|EFB18764.1| hypothetical protein PANDA_018131 [Ailuropoda melanoleuca]
Length = 1230
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|432855679|ref|XP_004068304.1| PREDICTED: bromodomain testis-specific protein-like [Oryzias
latipes]
Length = 969
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 14/157 (8%)
Query: 64 SGGKKMIASEHSKERSSILPFNKRQAQEVIEGPK-------DKRPKMDRGVTHQCSVILK 116
S G + A EHS +SI ++ + ++ PK DKR ++ + C+ ILK
Sbjct: 212 SRGDEFAAEEHS---ASIPLISRTGSGRPVKPPKKNLDMFEDKRVRLTEKL-RDCNNILK 267
Query: 117 SLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++ H A W F PVD + L + DY II +PMDL T+K ++D Y+ + EF ADV
Sbjct: 268 EMLSKRHCAYAWPFYTPVDAIALGLQDYHDIIKQPMDLSTIKKKMDHQEYTNATEFAADV 327
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
RL FSN YNPP + V MA++L +F+ ++ + +
Sbjct: 328 RLMFSNCYRYNPPSHGVVYMARKLQEVFEARYMKMSQ 364
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQC----SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ P+ VT+Q V++K+L H W F +PVD V L IPDY+ +I PMDL
Sbjct: 18 PEVTHPQRPGRVTNQLLYLERVVIKALWRHQYSWPFRQPVDAVALCIPDYYKLIKHPMDL 77
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GTV RL Y ++E + D+ F+N +YN P +++ MAQ L +F
Sbjct: 78 GTVMQRLKNRYYWEANECIKDISTMFNNCYVYNRPGDDIVFMAQTLEKIF 127
>gi|4826806|ref|NP_005095.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|164419758|ref|NP_001106653.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|426352675|ref|XP_004043835.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Gorilla
gorilla gorilla]
gi|426352677|ref|XP_004043836.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Gorilla
gorilla gorilla]
gi|12230989|sp|P25440.2|BRD2_HUMAN RecName: Full=Bromodomain-containing protein 2; AltName:
Full=O27.1.1; AltName: Full=Really interesting new gene
3 protein
gi|577293|dbj|BAA07641.1| KIAA9001 [Homo sapiens]
gi|2980663|emb|CAA43996.1| FSH [Homo sapiens]
gi|52545950|emb|CAH56171.1| hypothetical protein [Homo sapiens]
gi|119624068|gb|EAX03663.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624069|gb|EAX03664.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624071|gb|EAX03666.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|168277492|dbj|BAG10724.1| bromodomain-containing protein 2 [synthetic construct]
Length = 801
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|297661247|ref|XP_002809174.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pongo
abelii]
gi|297661249|ref|XP_002809175.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Pongo
abelii]
Length = 801
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|194211115|ref|XP_001493233.2| PREDICTED: bromodomain testis-specific protein-like isoform 2
[Equus caballus]
Length = 928
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL +PDY++II PMDL T++ RL+ Y + E + D
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLQLPDYYTIIKNPMDLNTIQKRLEHKYYVKASECIED 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 97 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 125
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 111 CSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK ++ W F PVD L + +Y+ ++ KPMDLGT+K ++D Y +
Sbjct: 275 CSEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDVVKKPMDLGTIKGKMDNQEYKDAY 334
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
EF ADVRL F N YNPP++ V MA+ L ++F++ + + ++ +P
Sbjct: 335 EFAADVRLMFMNCYRYNPPDHEVVTMARMLQDVFEMHFAKIPDEPVESMP 384
>gi|71067345|ref|NP_034368.2| bromodomain-containing protein 2 [Mus musculus]
gi|326368244|ref|NP_001191902.1| bromodomain-containing protein 2 [Mus musculus]
gi|81894326|sp|Q7JJ13.1|BRD2_MOUSE RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Female sterile homeotic-related protein 1; AltName:
Full=Fsrg-1; AltName: Full=Protein RING3
gi|2995270|emb|CAA15819.1| MMRING3.1.2 [Mus musculus]
gi|3041763|dbj|BAA25416.1| Ring3 [Mus musculus]
gi|3811391|gb|AAC69907.1| RING3 [Mus musculus]
gi|74186521|dbj|BAE34749.1| unnamed protein product [Mus musculus]
gi|74214328|dbj|BAE40404.1| unnamed protein product [Mus musculus]
gi|123233747|emb|CAM17898.1| bromodomain containing 2 [Mus musculus]
gi|148678305|gb|EDL10252.1| bromodomain containing 2 [Mus musculus]
gi|187954015|gb|AAI38657.1| Bromodomain containing 2 [Mus musculus]
gi|223459952|gb|AAI38656.1| Bromodomain containing 2 [Mus musculus]
Length = 798
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 122
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 123 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 182
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 183 EQELVVTIPK 192
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 330 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 382
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 383 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 442
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 443 DVFEFRYAKMPD 454
>gi|380815348|gb|AFE79548.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|380815350|gb|AFE79549.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420527|gb|AFH33477.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420529|gb|AFH33478.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948624|gb|AFI37917.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948626|gb|AFI37918.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
Length = 802
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|159795469|pdb|2RFJ|A Chain A, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|159795470|pdb|2RFJ|B Chain B, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|159795471|pdb|2RFJ|C Chain C, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|394986421|pdb|4FLP|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brdt
In Complex With The Inhibitor Jq1
gi|394986422|pdb|4FLP|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brdt
In Complex With The Inhibitor Jq1
Length = 119
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+K RL+ Y+ + E + D
Sbjct: 20 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 79
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 80 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 108
>gi|15706263|emb|CAC69989.1| bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|426387578|ref|XP_004060242.1| PREDICTED: bromodomain-containing protein 4 [Gorilla gorilla
gorilla]
Length = 1362
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|397484965|ref|XP_003813634.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Pan paniscus]
Length = 1362
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|19718731|ref|NP_490597.1| bromodomain-containing protein 4 isoform long [Homo sapiens]
gi|20141192|sp|O60885.2|BRD4_HUMAN RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Protein HUNK1
gi|16589003|gb|AAL26987.1|AF386649_1 bromodomain-containing 4 [Homo sapiens]
gi|119604879|gb|EAW84473.1| bromodomain containing 4, isoform CRA_d [Homo sapiens]
Length = 1362
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|3273701|gb|AAC24810.1| female sterile homeotic-related protein Frg-1 [Mus musculus]
Length = 798
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 122
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 123 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 182
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 183 EQELVVTIPK 192
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 330 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 382
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 383 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 442
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 443 DVFEFRYAKMPD 454
>gi|402866610|ref|XP_003897472.1| PREDICTED: bromodomain-containing protein 2 [Papio anubis]
Length = 804
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 331 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 383
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 384 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 443
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 444 DVFEFRYAKMPD 455
>gi|297466946|ref|XP_002704782.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
Length = 1368
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CNGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|297476378|ref|XP_002688607.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
gi|296486110|tpg|DAA28223.1| TPA: bromodomain containing 4 [Bos taurus]
Length = 1368
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CNGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|2995269|emb|CAA15818.1| MMRING3.1.1 [Mus musculus]
gi|62945214|dbj|BAD97682.1| bromodomain-containing Brd2 protein [Mus musculus]
Length = 752
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 77 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 137 EQELVVTIPK 146
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 284 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 336
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 337 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 396
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 397 DVFEFRYAKMPD 408
>gi|126309678|ref|XP_001369391.1| PREDICTED: bromodomain-containing protein 2-like [Monodelphis
domestica]
Length = 801
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 101 PKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKT 156
PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+GT+K
Sbjct: 69 PKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKR 128
Query: 157 RLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
RL+ N Y ++ E + D F+N +YN P +++ MAQ L +F
Sbjct: 129 RLENNYYWLASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 78 RSSILPFNKRQAQEVIEGPKDKRP------------KMDRGVTHQCSVILKSLM--MHPA 123
+++ LP +R++ I+ P+ P K+ + H C+ ILK L+ H A
Sbjct: 310 KAARLPPTRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAA 368
Query: 124 -GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN
Sbjct: 369 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK 428
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSLEE 210
YNPP+++V MA++L ++F+ ++ + +
Sbjct: 429 YNPPDHDVVAMARKLQDVFEFRYAKMPD 456
>gi|402218827|gb|EJT98902.1| Bromodomain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 824
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Query: 104 DRGVTHQ---CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTR 157
D G Q C+ +L+ L + A + F PVD V L+IPDY II KPMDL T+K +
Sbjct: 435 DDGTQEQLKFCASVLQHLFKKSYYSAAYPFYDPVDYVALNIPDYPKIIKKPMDLSTMKKK 494
Query: 158 LDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
L+ Y + EF AD +L N LYNP ++ V + +ELN +FD KWK L
Sbjct: 495 LESKTYENAQEFHADFKLMIKNCRLYNPAQSPVREAGEELNRIFDEKWKGL 545
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 22/114 (19%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL-------------------DRNLYSVSD 167
F +PVD V L+IP Y ++I PMDLGTV+ +L Y +D
Sbjct: 238 FLKPVDTVGLNIPHYHNVIKHPMDLGTVEEKLALSNPAVKSKQSGSATESDPSKRYWTAD 297
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGL 221
EFVADVRL NA+ +N + V +MA+ L +FD K E +E PK L
Sbjct: 298 EFVADVRLIVDNAIKFNGEAHVVSQMAKRLLEIFD---KQAERMPPAEEPKPVL 348
>gi|157453|gb|AAA28540.1| 7.6 kb fsh membrane protein [Drosophila melanogaster]
Length = 2038
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 484 CNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 543
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++ ++
Sbjct: 544 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 587
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P +RP + T+Q ++K++M H W F +PVD KL++PDY II +PMD+
Sbjct: 27 PPAERPGRN---TNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDM 83
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
GT+K RL+ N Y + E + D F+N +YN P +V MAQ L +F K +S+
Sbjct: 84 GTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 140
>gi|24640482|ref|NP_511078.2| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
gi|68067442|sp|P13709.2|FSH_DROME RecName: Full=Homeotic protein female sterile; AltName:
Full=Fragile-chorion membrane protein
gi|22831925|gb|AAF46312.3| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
Length = 2038
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 484 CNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 543
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++ ++
Sbjct: 544 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 587
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P +RP + T+Q ++K++M H W F +PVD KL++PDY II +PMD+
Sbjct: 27 PPAERPGRN---TNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDM 83
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
GT+K RL+ N Y + E + D F+N +YN P +V MAQ L +F K +S+
Sbjct: 84 GTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 140
>gi|442615454|ref|NP_001259321.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
gi|440216522|gb|AGB95166.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
Length = 2046
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 484 CNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 543
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++ ++
Sbjct: 544 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 587
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P +RP + T+Q ++K++M H W F +PVD KL++PDY II +PMD+
Sbjct: 27 PPAERPGRN---TNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDM 83
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
GT+K RL+ N Y + E + D F+N +YN P +V MAQ L +F K +S+
Sbjct: 84 GTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 140
>gi|297661251|ref|XP_002809176.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Pongo
abelii]
Length = 754
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 77 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 137 EQELVVTIPK 146
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 284 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 336
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 337 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 396
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 397 DVFEFRYAKMPD 408
>gi|291413178|ref|XP_002722853.1| PREDICTED: bromodomain-containing protein 4 [Oryctolagus cuniculus]
Length = 1346
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++ V
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPV 465
>gi|52545923|emb|CAH56179.1| hypothetical protein [Homo sapiens]
Length = 754
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 77 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 137 EQELVVTIPK 146
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 284 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 336
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 337 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 396
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 397 DVFEFRYAKMPD 408
>gi|313747419|ref|NP_001186385.1| bromodomain-containing protein 2 isoform 3 [Homo sapiens]
gi|426352681|ref|XP_004043838.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Gorilla
gorilla gorilla]
gi|182769|gb|AAA68890.1| putative [Homo sapiens]
Length = 754
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 77 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 137 EQELVVTIPK 146
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 284 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 336
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 337 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 396
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 397 DVFEFRYAKMPD 408
>gi|395533918|ref|XP_003768996.1| PREDICTED: bromodomain-containing protein 2-like [Sarcophilus
harrisii]
Length = 800
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 101 PKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKT 156
PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+GT+K
Sbjct: 69 PKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKR 128
Query: 157 RLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
RL+ N Y ++ E + D F+N +YN P +++ MAQ L +F
Sbjct: 129 RLENNYYWLASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 78 RSSILPFNKRQAQEVIEGPKDKRP------------KMDRGVTHQCSVILKSLM--MHPA 123
+++ LP +R++ I+ P+ P K+ + H C+ ILK L+ H A
Sbjct: 310 KAARLPPTRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAA 368
Query: 124 -GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN
Sbjct: 369 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK 428
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSLEE 210
YNPP+++V MA++L ++F+ ++ + +
Sbjct: 429 YNPPDHDVVAMARKLQDVFEFRYAKMPD 456
>gi|301785596|ref|XP_002928216.1| PREDICTED: bromodomain-containing protein 4-like [Ailuropoda
melanoleuca]
Length = 1260
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|297290567|ref|XP_001115810.2| PREDICTED: hypothetical protein LOC717893 isoform 2 [Macaca
mulatta]
Length = 755
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 77 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 137 EQELVVTIPK 146
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 284 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 336
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 337 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 396
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 397 DVFEFRYAKMPD 408
>gi|395847805|ref|XP_003796555.1| PREDICTED: bromodomain-containing protein 4 [Otolemur garnettii]
Length = 1366
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++ V
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPV 465
>gi|301113438|ref|XP_002998489.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111790|gb|EEY69842.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 910
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 62/105 (59%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+ LM GW FN PVDPV+ +IPDYF II PMDLGT+K RL+ Y+ + F DV
Sbjct: 114 LLQKLMDSEYGWTFNNPVDPVQWNIPDYFDIIKCPMDLGTIKKRLEAEHYNSVEAFAGDV 173
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPK 218
RL F N + YN N + A++L F+ SL+ + ++ K
Sbjct: 174 RLVFENCIAYNSSTNKFNIAAKQLLASFNKSLASLKNQLEKQLFK 218
>gi|1370115|emb|CAA65450.1| kinase [Homo sapiens]
Length = 754
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 77 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 137 EQELVVTIPK 146
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 284 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 336
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 337 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 396
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 397 DVFEFRYAKMPD 408
>gi|195355783|ref|XP_002044367.1| GM11218 [Drosophila sechellia]
gi|194130685|gb|EDW52728.1| GM11218 [Drosophila sechellia]
Length = 1272
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 486 CNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 545
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++ +
Sbjct: 546 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPD 588
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P +RP + T+Q ++K++M H W F +PVD KL++PDY II +PMD+
Sbjct: 27 PPAERPGRN---TNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDM 83
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
GT+K RL+ N Y + E + D F+N +YN P +V MAQ L +F K +S+
Sbjct: 84 GTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 140
>gi|325652134|ref|NP_001191701.1| bromodomain-containing protein 4 [Sus scrofa]
gi|321172828|gb|ADW77216.1| bromodomain-containing protein 4 [Sus scrofa]
Length = 1368
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++ V
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPV 465
>gi|296191127|ref|XP_002743521.1| PREDICTED: bromodomain-containing protein 3 [Callithrix jacchus]
Length = 1364
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 685 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 744
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 745 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 796
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 956 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 1015
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
F ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 1016 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 1059
>gi|431892496|gb|ELK02931.1| Bromodomain-containing protein 4 [Pteropus alecto]
Length = 1345
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 144 IISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDI 203
II PMD+ T+K++L+ Y + EF ADVRL FSN YNPP++ V MA++L ++F++
Sbjct: 393 IIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEM 452
Query: 204 KWKSLEEKWSSEV 216
++ + ++ V
Sbjct: 453 RFAKMPDEPEEPV 465
>gi|157819431|ref|NP_001102045.1| bromodomain-containing protein 3 [Rattus norvegicus]
gi|149039215|gb|EDL93435.1| bromodomain containing 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 725
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 304 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 362
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ + ++ E
Sbjct: 363 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE-PME 421
Query: 216 VP 217
VP
Sbjct: 422 VP 423
>gi|395506368|ref|XP_003757505.1| PREDICTED: bromodomain-containing protein 3 [Sarcophilus harrisii]
Length = 724
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 151
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 311 CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQDAQ 370
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 371 GFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
>gi|1588281|prf||2208296A RING3 protein
Length = 509
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 77 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 106 GVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
G C+ ILK L+ H A W F +PVD L + DY II PMDL TVK +++
Sbjct: 183 GSLEPCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD 242
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + EF ADVRL FSN YNPP+++V MA++L ++F+ ++ +
Sbjct: 243 YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 288
>gi|330414421|gb|AEC13624.1| bromodomain containing protein 2 [Ginglymostoma cirratum]
gi|339895692|dbj|BAK52515.1| bromodomain containing 2 [Ginglymostoma cirratum]
Length = 783
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 74 PEVSNPKKPGRVTNQVQYMQKVLMKALWKHQFAWPFYQPVDAVKLSLPDYHKIIKQPMDM 133
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L LF
Sbjct: 134 GTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKLF 183
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II PMDL T+K ++D Y +
Sbjct: 360 CNGILKELLSKKHAAYAWPFYKPVDAKALGLHDYHDIIKHPMDLSTIKRKMDEREYQDAQ 419
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP+++V MA++L ++F+ ++ +
Sbjct: 420 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRFAKM 460
>gi|345787686|ref|XP_541985.3| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
isoform 1 [Canis lupus familiaris]
Length = 1360
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 357 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 416
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 417 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
>gi|195130189|ref|XP_002009535.1| GI15407 [Drosophila mojavensis]
gi|193907985|gb|EDW06852.1| GI15407 [Drosophila mojavensis]
Length = 2056
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 511 CNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 570
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++ ++
Sbjct: 571 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 614
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
P+D+ + + + ++K + H W F +PVD KL++PDY II +PMD+GT+K
Sbjct: 28 PQDRPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIK 87
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
RL+ N Y + E + D F+N +YN P +V MAQ L +F K +S+
Sbjct: 88 KRLENNYYWSAKEAIHDFNTMFTNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 140
>gi|442615458|ref|NP_001259323.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
gi|440216524|gb|AGB95168.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
Length = 1115
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 489 CNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 548
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++
Sbjct: 549 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 589
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 108 THQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
T+Q ++K++M H W F +PVD KL++PDY II +PMD+GT+K RL+ N Y
Sbjct: 36 TNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYY 95
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+ E + D F+N +YN P +V MAQ L +F K +S+
Sbjct: 96 WSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 140
>gi|242058181|ref|XP_002458236.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
gi|241930211|gb|EES03356.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
Length = 225
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
GWVF+ PVD L + DY+++++ PMDLGTV RL+R Y F DVRLTF NAM Y
Sbjct: 76 GWVFDAPVDARALGLRDYYTVVADPMDLGTVLRRLERRRYVYPTAFADDVRLTFRNAMSY 135
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAG-LGKILSGKMMEVNDTR 236
N + V++ A EL+ +F+ +W S+E + +P L ++ ++ E D R
Sbjct: 136 NDEGDPVYESAAELSGIFEARWASIEAELPHPLPPDDKLPRLPVARVPEKRDVR 189
>gi|67972378|dbj|BAE02531.1| unnamed protein product [Macaca fascicularis]
Length = 776
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+ +
Sbjct: 77 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQ 135
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 284 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 336
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 337 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 396
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 397 DVFEFRYAKMPD 408
>gi|442615456|ref|NP_001259322.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
gi|440216523|gb|AGB95167.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
Length = 1105
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 479 CNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 538
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++
Sbjct: 539 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 579
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 108 THQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
T+Q ++K++M H W F +PVD KL++PDY II +PMD+GT+K RL+ N Y
Sbjct: 36 TNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYY 95
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+ E + D F+N +YN P +V MAQ L +F K +S+
Sbjct: 96 WSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 140
>gi|195457098|ref|XP_002075425.1| GK15212 [Drosophila willistoni]
gi|194171510|gb|EDW86411.1| GK15212 [Drosophila willistoni]
Length = 2114
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 530 CNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 589
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++ ++
Sbjct: 590 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 633
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P +RP + T+Q ++K++M H W F +PVD KL++PDY II +PMD+
Sbjct: 68 PPAERPGRN---TNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDM 124
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
GT+K RL+ N Y + E + D F+N +YN P +V MAQ L +F K +S+
Sbjct: 125 GTIKKRLENNYYWSAKEAILDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 181
>gi|24640484|ref|NP_727228.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45554398|ref|NP_996368.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|45554406|ref|NP_996369.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45554416|ref|NP_996370.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|281360582|ref|NP_001162699.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
gi|157455|gb|AAA28541.1| 5.9 kb fsh membrane protein [Drosophila melanogaster]
gi|22831926|gb|AAN09226.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45446848|gb|AAS65277.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|45446849|gb|AAS65278.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45446850|gb|AAS65279.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|51092171|gb|AAT94499.1| LD26482p [Drosophila melanogaster]
gi|220945958|gb|ACL85522.1| fs(1)h-PA [synthetic construct]
gi|272506027|gb|ACZ95234.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
Length = 1110
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 484 CNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 543
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++
Sbjct: 544 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 108 THQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
T+Q ++K++M H W F +PVD KL++PDY II +PMD+GT+K RL+ N Y
Sbjct: 36 TNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYY 95
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+ E + D F+N +YN P +V MAQ L +F K +S+
Sbjct: 96 WSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 140
>gi|395513633|ref|XP_003761027.1| PREDICTED: bromodomain-containing protein 4 [Sarcophilus harrisii]
Length = 1379
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAHECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ I+K + H A W F +PVD L + DY II PMDL T+K++L+ Y +
Sbjct: 378 CTGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLETREYRDAQ 437
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 438 EFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 478
>gi|219117946|ref|XP_002179758.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408811|gb|EEC48744.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 2426
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 79 SSILPF-NKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLD 137
+S+LPF + ++ ++ K R VT++C +++ L+ GWVF+ VDP+ L
Sbjct: 1218 TSLLPFMSLVSVRKHVDSLNKKTSLWSRMVTYKCLPVIQELIDDQFGWVFHDAVDPIALG 1277
Query: 138 IPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQEL 197
+PDYF ++ PM L VK +L+ +Y +D F DV L F NA+LYN + V EL
Sbjct: 1278 LPDYFDVVKHPMHLELVKKKLENAIYCDTDSFAHDVELVFENAILYNGETSEV----GEL 1333
Query: 198 NNLFDIKWKSLEEK 211
N F +K+ + EK
Sbjct: 1334 ANSFLVKFAQIYEK 1347
>gi|71897271|ref|NP_001025845.1| bromodomain-containing protein 2 [Gallus gallus]
gi|1370092|emb|CAA65449.1| kinase [Gallus gallus]
Length = 729
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 77 GTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II PMDL T+K +++ Y +
Sbjct: 300 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQ 359
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP+++V MA++L ++F+ + +
Sbjct: 360 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 400
>gi|443611854|gb|AGC96178.1| bromodomain-containing protein 2 [Tympanuchus cupido]
Length = 779
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 122
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 123 GTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II PMDL T+K +++ Y +
Sbjct: 350 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQ 409
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP+++V MA++L ++F+ + +
Sbjct: 410 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 450
>gi|242091894|ref|XP_002436437.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
gi|241914660|gb|EER87804.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
Length = 346
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR---NLY 163
+ Q V+LK + H W F +PVD V L IPDY II++PMD T++ +++R Y
Sbjct: 79 LMRQFGVLLKEITSHKDAWPFLKPVDVVTLHIPDYHKIITQPMDFSTIQKKMERKDGTCY 138
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
+ E +DVRL F+NAM YN +N VH MA+ L F EEKW +PK
Sbjct: 139 TNVREICSDVRLIFANAMKYNDDQNVVHLMAKSLLEKF-------EEKWLHFLPKV 187
>gi|431897072|gb|ELK06336.1| Bromodomain testis-specific protein, partial [Pteropus alecto]
Length = 931
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD +KL +PDY++II KPMDL T+K RL+ Y + E + D
Sbjct: 44 VVLKALWKHSFSWPFQQPVDAMKLKLPDYYTIIKKPMDLSTIKKRLEHKYYVQASECIED 103
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+ FSN LYN +++ MAQ L LF
Sbjct: 104 FNMMFSNCYLYNKTGDDIVLMAQALEKLF 132
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 76 KERSSILPFNKRQAQEVIEGPKDKRPKMDRG-VTHQ---CSVILKSLMM---HPAGWVFN 128
K+ + + P + + V+ P+ + + G VT Q CS ILK ++ W F
Sbjct: 244 KKSAKMPPVKETVLKNVLPDPQQQHKVVKSGKVTEQLRHCSEILKEMLAKKHFSYAWPFY 303
Query: 129 RPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEN 188
PVD L + +Y+ I+ PMDLGT+K ++D Y + EF ADVRL F N YNPP++
Sbjct: 304 NPVDVNALGLHNYYDIVKNPMDLGTIKRKMDNQEYKDAYEFAADVRLMFVNCYKYNPPDH 363
Query: 189 NVHKMAQELNNLFDIKW 205
V MA+ L ++F++ +
Sbjct: 364 EVVAMARMLQDVFEMHF 380
>gi|345326866|ref|XP_001506320.2| PREDICTED: bromodomain-containing protein 4 [Ornithorhynchus
anatinus]
Length = 719
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT++ RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIRKRLENNYYWNAHECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS I+K + H A W F +PVD L + DY II PMDL T+K++L+ Y +
Sbjct: 355 CSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQ 414
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 415 EFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 455
>gi|326936108|ref|XP_003214100.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Meleagris gallopavo]
Length = 601
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 44 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 103
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 104 GTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 153
>gi|384254936|gb|AFH75302.1| BRD2 [Lyrurus tetrix]
Length = 779
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 122
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 123 GTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II PMDL T+K +++ Y +
Sbjct: 350 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQ 409
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP+++V MA++L ++F+ + +
Sbjct: 410 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 450
>gi|21594670|gb|AAH32124.1| BRD3 protein [Homo sapiens]
gi|119608520|gb|EAW88114.1| bromodomain containing 3, isoform CRA_b [Homo sapiens]
Length = 556
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
F ADVRL FSN YNPP++ V MA++L ++F++++ + +
Sbjct: 375 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 417
>gi|2780775|dbj|BAA24377.1| Ring3 [Mus musculus]
Length = 549
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 122
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 123 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 182
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 183 EQELVVTIPK 192
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 78 RSSILPFNKRQAQEVIEGPKDKRP------------KMDRGVTHQCSVILKSLM--MHPA 123
+++ LP +R++ I+ P+ P K+ + H C+ ILK L+ H A
Sbjct: 308 KAARLPPMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAA 366
Query: 124 -GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK 426
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSLEE 210
YNPP+++V MA++L ++F+ ++ + +
Sbjct: 427 YNPPDHDVVAMARKLQDVFEFRYAKMPD 454
>gi|133777453|gb|AAI14644.1| BRD2 protein [Bos taurus]
Length = 558
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C+ ILK L+ H A W F +PVD L + DY II PMDL TVK
Sbjct: 342 KKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK 400
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
+++ Y + EF ADVRL FSN YNPP+++V MA++L ++F+ ++ + +
Sbjct: 401 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD 455
>gi|327288352|ref|XP_003228892.1| PREDICTED: bromodomain-containing protein 3-like [Anolis
carolinensis]
Length = 734
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D F+N +YN P +++ MAQ L +F
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 319 CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQDAQ 378
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 379 GFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 419
>gi|395146456|gb|AFN53616.1| BRD2 [Chrysolophus pictus]
Length = 733
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 77 GTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II PMDL T+K +++ Y +
Sbjct: 304 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQ 363
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP+++V MA++L ++F+ + +
Sbjct: 364 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
>gi|355673420|gb|AER95166.1| bromodomain containing 2 [Mustela putorius furo]
Length = 613
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 72 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 131
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 132 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 191
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 192 EQELVVTIPK 201
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 81/148 (54%), Gaps = 16/148 (10%)
Query: 78 RSSILPFNKRQAQEVIEGPKDKRP------------KMDRGVTHQCSVILKSLM--MHPA 123
+++ LP +R++ I+ P+ P K+ + H C+ ILK L+ H A
Sbjct: 317 KAARLPTMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAA 375
Query: 124 -GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
W F +PVD L + DY II PMDL TV +++ Y + EF ADVRL FSN
Sbjct: 376 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVXRKMENRDYRDAQEFAADVRLMFSNCYK 435
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSLEE 210
YNPP+++V MA++L ++F+ ++ + +
Sbjct: 436 YNPPDHDVVAMARKLQDVFEFRYAKMPD 463
>gi|281349316|gb|EFB24900.1| hypothetical protein PANDA_009517 [Ailuropoda melanoleuca]
Length = 696
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D F+N +YN P +++ MAQ L +F
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C ILK ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 304 KKGKLSEHLRH-CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 362
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y+ + F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 363 KKMDGREYADAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|195565677|ref|XP_002106425.1| GD16134 [Drosophila simulans]
gi|194203801|gb|EDX17377.1| GD16134 [Drosophila simulans]
Length = 1038
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 460 CNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 519
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++ +
Sbjct: 520 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPD 562
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 96 PKDKRPKMDRG-VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTV 154
P +RP + + + ++K + H W F +PVD KL++PDY II +PMD+GT+
Sbjct: 27 PPAERPGRNTNQLQYLIQTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTI 86
Query: 155 KTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
K RL+ N Y + E + D F+N +YN P +V MAQ L +F K +S+
Sbjct: 87 KKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 140
>gi|7512236|pir||T28145 RING3 kinase - chicken
gi|3129967|emb|CAA18965.1| RING3 kinase [synthetic construct]
gi|197304363|dbj|BAG69309.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304393|dbj|BAG69337.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304423|dbj|BAG69365.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304438|dbj|BAG69379.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304497|dbj|BAG69434.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 77 GTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II PMDL T+K +++ Y +
Sbjct: 304 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQ 363
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP+++V MA++L ++F+ + +
Sbjct: 364 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
>gi|308810150|ref|XP_003082384.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
gi|116060852|emb|CAL57330.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
Length = 1083
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Query: 96 PKDKRPKMDRGVTHQCSV--ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGT 153
P+ + R T Q + I + +M + ++F +PVDPV +IPDYF +I PMDLGT
Sbjct: 565 PRQTSARRGRSATPQSRMQSIHRIIMTNKNAYMFLKPVDPVYWEIPDYFDVIKNPMDLGT 624
Query: 154 VKTRLDRNLY-SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
+ T+L++ Y + + ADVRL +SNAM YN E V+KMA+ ++ F+ +W S
Sbjct: 625 IMTKLEKREYENQPSAYAADVRLVWSNAMTYNKEEEPVYKMARIMSREFEYQWSS 679
>gi|67483926|ref|XP_657183.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56474427|gb|EAL51797.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449704936|gb|EMD45090.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 485
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C IL L + P F PVDP+ ++PDY+ +I+ PMDL T+ + +Y D+F
Sbjct: 275 CRQILNHLKLLPEASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKFRYGIYEHIDDFA 334
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
DVRL F NAM YNPP N +H A L FD + K +
Sbjct: 335 NDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQIKEI 372
>gi|301770655|ref|XP_002920742.1| PREDICTED: bromodomain-containing protein 3-like [Ailuropoda
melanoleuca]
Length = 728
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D F+N +YN P +++ MAQ L +F
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C ILK ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 304 KKGKLSEHLRH-CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 362
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y+ + F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 363 KKMDGREYADAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|328863827|gb|EGG12926.1| hypothetical protein MELLADRAFT_46486 [Melampsora larici-populina
98AG31]
Length = 339
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%)
Query: 125 WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYN 184
W F PVDPVKL +P+Y +II KPMDL T+K +LDR Y F AD RL +N +N
Sbjct: 109 WPFYEPVDPVKLGVPEYLTIIKKPMDLSTIKQKLDRGEYKAGAAFAADFRLMLNNCFTFN 168
Query: 185 PPENNVHKMAQELNNLFDIKW 205
P V+ ++L LF+ KW
Sbjct: 169 PVGTPVYNFGKQLECLFEQKW 189
>gi|2780777|dbj|BAA24378.1| Ring3 [Mus musculus]
gi|2780779|dbj|BAA24379.1| Ring3 [Mus musculus]
Length = 503
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 77 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 137 EQELVVTIPK 146
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 284 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 336
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 337 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 396
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 397 DVFEFRYAKMPD 408
>gi|34392374|dbj|BAC82511.1| Serine threonine Kinase [Coturnix japonica]
Length = 735
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 77 GTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II PMDL T+K +++ Y +
Sbjct: 304 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQ 363
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP+++V MA++L ++F+ + +
Sbjct: 364 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
>gi|169730373|gb|ACA64774.1| bromodomain-containing protein 2 [Meleagris gallopavo]
Length = 779
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 122
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 123 GTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 172
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II PMDL T+K +++ Y +
Sbjct: 350 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQ 409
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP+++V MA++L ++F+ + +
Sbjct: 410 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 450
>gi|332887140|dbj|BAJ53019.2| Bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 77 GTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II PMDL T+K +++ Y +
Sbjct: 304 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQ 363
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP+++V MA++L ++F+ + +
Sbjct: 364 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
>gi|118099425|ref|XP_425330.2| PREDICTED: bromodomain-containing protein 3 [Gallus gallus]
Length = 722
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D F+N +YN P +++ MAQ L +F
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 311 CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQDAQ 370
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 371 GFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
>gi|197304453|dbj|BAG69393.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 77 GTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II PMDL T+K +++ Y +
Sbjct: 304 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQ 363
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP+++V MA++L ++F+ + +
Sbjct: 364 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
>gi|148356975|dbj|BAF62999.1| Bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304348|dbj|BAG69295.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304378|dbj|BAG69323.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304408|dbj|BAG69351.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304468|dbj|BAG69407.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304482|dbj|BAG69420.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304512|dbj|BAG69448.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304526|dbj|BAG69461.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863985|gb|ACY01481.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863995|gb|ACY01490.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 77 GTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II PMDL T+K +++ Y +
Sbjct: 304 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQ 363
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP+++V MA++L ++F+ + +
Sbjct: 364 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
>gi|162287117|ref|NP_001104751.1| bromodomain-containing protein 4 [Danio rerio]
gi|159507457|gb|ABW97742.1| bromodomain 4 [Danio rerio]
Length = 1444
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LKSL H W F+ PVD VKL++PDY+ II PMD+GT+K RL+ Y+ + E + D
Sbjct: 54 VVLKSLWKHQFAWPFHAPVDAVKLNLPDYYKIIKNPMDMGTIKKRLESAFYTSAQECIQD 113
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
F+N +YN P +++ MA+ L +F K + ++
Sbjct: 114 FNTMFTNCYIYNKPGDDIVLMAEALEKVFLTKISEMPQQ 152
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 12/173 (6%)
Query: 46 SSSVAESNQLMMSKPYRSSGGKKMIASEHSKERSSILPFNKRQAQEV----IEGPKDKRP 101
+++ ++QL S P S GK + +++ R S LP K++A + P P
Sbjct: 303 TTTPTANDQLNESSPAESKSGKTLPRRDNT--RPSKLP--KKEAPDSQHHWTAAPGTPSP 358
Query: 102 KMDRGVTHQCSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL 158
K + + CS I+K + H A W F +PVD L + DY II PMDL T+K +L
Sbjct: 359 KQQEQLRY-CSGIVKDMFAKKHAAYAWPFYKPVDVDTLGLHDYHDIIKHPMDLSTIKDKL 417
Query: 159 DRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
+ Y + EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 418 ETRQYREAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 470
>gi|26332152|dbj|BAC29806.1| unnamed protein product [Mus musculus]
Length = 511
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 43 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 102
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 103 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 154
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 303 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 361
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 362 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
>gi|444524033|gb|ELV13688.1| Epoxide hydrolase 3 [Tupaia chinensis]
Length = 941
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKSPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 40/58 (68%)
Query: 154 VKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
VK++L+ Y + EF ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 205 VKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 262
>gi|407044057|gb|EKE42339.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 485
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C IL L + P F PVDP+ ++PDY+ +I+ PMDL T+ + +Y D+F
Sbjct: 275 CRQILNHLKLLPEASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKFRYGIYEHIDDFA 334
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
DVRL F NAM YNPP N +H A L FD + K +
Sbjct: 335 NDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQIKEI 372
>gi|348538983|ref|XP_003456969.1| PREDICTED: hypothetical protein LOC100693386 [Oreochromis
niloticus]
Length = 1432
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F PVD +KL++PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 88 VVLKTLWKHNFAWPFQAPVDAIKLNLPDYYKIIKSPMDMGTIKKRLENNYYWNAQECIQD 147
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 148 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 176
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 56/87 (64%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F +PVD L + DY II PMDL T+K +LD Y + EF ADVRL FSN Y
Sbjct: 454 AWPFYKPVDAKALGLHDYHEIIKHPMDLSTIKKKLDNRQYRDAQEFAADVRLMFSNCYKY 513
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLEE 210
NPP+++V MA++L ++F++++ + +
Sbjct: 514 NPPDHDVVAMARKLQDVFEMRFAKMPD 540
>gi|58865638|ref|NP_001012031.1| bromodomain testis-specific protein [Rattus norvegicus]
gi|50927337|gb|AAH78999.1| Brdt protein [Rattus norvegicus]
gi|165971045|gb|AAI58631.1| Brdt protein [Rattus norvegicus]
Length = 326
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD KL +PDY++II PMDL T+K RL+ Y + E V D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGD 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 97 FNTMFSNCYLYNKPGDDIVVMAQALEKLF 125
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 110 QCSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKT 156
CS ILK ++ P W F PVD L + +Y+ I+ PMDLGT+K
Sbjct: 274 HCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKV 323
>gi|303285596|ref|XP_003062088.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
gi|226456499|gb|EEH53800.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
Length = 476
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN-LYSV 165
V+ QC +K +M H + F +PVD L + +Y I+ +PMDLGTV+ +++ +Y+
Sbjct: 64 VSKQCLASVKQVMSHKWSFPFVKPVDAAALGLENYHDIVKQPMDLGTVRANIEKGGVYAA 123
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
+E DV LTF+NAMLYN + +VH MA L ++ +W ++EK
Sbjct: 124 CEEVNRDVELTFANAMLYNGAQTDVHVMAATLKQFWEPRWAVIQEK 169
>gi|26345416|dbj|BAC36359.1| unnamed protein product [Mus musculus]
Length = 505
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 43 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 102
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 103 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 154
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 303 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 361
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 362 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
>gi|340381558|ref|XP_003389288.1| PREDICTED: bromodomain-containing protein 2-like [Amphimedon
queenslandica]
Length = 1057
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 54/84 (64%)
Query: 121 HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
H W F++PVDPV L+IPDYF+II +PMDL +K +LD N YS + E + D + F+N
Sbjct: 211 HHYAWPFHKPVDPVALNIPDYFNIIKRPMDLTLIKKQLDHNGYSSAKECIQDFKTMFNNC 270
Query: 181 MLYNPPENNVHKMAQELNNLFDIK 204
YN P ++V M Q L LFD K
Sbjct: 271 YTYNKPTDDVVFMCQALERLFDQK 294
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 22/153 (14%)
Query: 69 MIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMD----------RGVTHQ---CSVIL 115
++AS SS +P +R++ I KRPK+D R +T Q C I+
Sbjct: 410 VVASTPVHILSSAVP-TRRESTRTI-----KRPKLDLPGESSYGRKRPLTVQLRYCLSIV 463
Query: 116 KSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
K + W F PVD L + DY II +PMDL T+K +L+ Y +F AD
Sbjct: 464 KDFFSKKHQASAWPFYNPVDVKGLGLHDYLDIIKQPMDLTTLKKKLEDREYEDPSQFAAD 523
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+RL F+N YNPPE++V KMA+++ ++F+ K+
Sbjct: 524 MRLIFTNCYKYNPPEHDVVKMARKVQDIFEFKF 556
>gi|403301507|ref|XP_003941429.1| PREDICTED: bromodomain-containing protein 3 [Saimiri boliviensis
boliviensis]
Length = 726
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
+ + +V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y +
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSA 98
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
E + D F+N +YN P +++ MAQ L +F
Sbjct: 99 SECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 375 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|326930474|ref|XP_003211372.1| PREDICTED: bromodomain-containing protein 3-like [Meleagris
gallopavo]
Length = 720
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D F+N +YN P +++ MAQ L +F
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIF 129
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 311 CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQDAQ 370
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 371 GFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
>gi|384247311|gb|EIE20798.1| hypothetical protein COCSUDRAFT_43706 [Coccomyxa subellipsoidea
C-169]
Length = 534
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V+ QC +LKS++ H W F PVD + DY +++ PMDL VK +++ Y+
Sbjct: 89 VSKQCMSVLKSILAHKWAWPFADPVDLARYA--DYLNVVKSPMDLKWVKRKVEGGQYATP 146
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF AD RL F+NA YNPP +V+ MA L F+ KW S+
Sbjct: 147 AEFAADFRLVFANAHTYNPPGTDVYVMASTLLARFEDKWNSV 188
>gi|351703550|gb|EHB06469.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 798
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 122
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 123 GTIKRRLENTYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 182
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 183 EQELVVTIPK 192
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 330 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 382
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 383 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 442
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 443 DVFEFRYAKMPD 454
>gi|432888948|ref|XP_004075102.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 460
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 68/126 (53%)
Query: 98 DKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTR 157
DK + + + +V++KSL HP W F +PVD V L +PDY II+ PMD+GT+K R
Sbjct: 69 DKPGRRTNQLKYMHNVVIKSLWRHPFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKR 128
Query: 158 LDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
L+ N Y + E + D F+N +YN P +++ MA L +F K + + P
Sbjct: 129 LENNYYWSASECMEDFNTMFTNCYIYNKPTDDIVLMALPLEKIFLNKVSLMPRREVEIFP 188
Query: 218 KAGLGK 223
G GK
Sbjct: 189 TKGKGK 194
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 65/106 (61%), Gaps = 7/106 (6%)
Query: 111 CSVILKSLM-----MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
CS ILK ++ M+ W F +PVD L + DY II PMDL TVK ++D Y
Sbjct: 233 CSDILKEMLSKKHSMY--AWPFYKPVDAEALGLHDYHDIIKYPMDLSTVKKKMDAGDYQD 290
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
+++F ADVRL FSN YNPP+++V MA++L +F+ K+ + E+
Sbjct: 291 AEQFSADVRLIFSNCYKYNPPQHSVVGMARKLQGVFEQKFAKMPEE 336
>gi|116283313|gb|AAH04832.1| Brd3 protein [Mus musculus]
Length = 501
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 43 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 102
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 103 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 154
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 303 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 361
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 362 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
>gi|409051976|gb|EKM61452.1| hypothetical protein PHACADRAFT_156702 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1899
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C LK L+ H + VF +PVDPV+ PDY +I PMDLGT+ +LDR +Y EF
Sbjct: 1223 CRATLKKLIAHKSAPVFRQPVDPVRDRAPDYMQVIKNPMDLGTMGVKLDRGMYKNRSEFE 1282
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW----KSLEEK 211
D RL +NA LYN P + V+ A L + FD +W K+LE K
Sbjct: 1283 QDFRLMCTNAKLYNAPRSFVYDEAVRLESYFDKEWARVNKTLEAK 1327
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 86 KRQAQEVIEGPKDKRPKMDRGVT-----HQCSVILKSLMMHPAGWVFNRPVDPVKLDIPD 140
+R+A I PK K+P + +C IL++L+ P +F +PVDP++ P
Sbjct: 1635 EREAPSPISTPKLKKPSPPHQIATLVNERKCKDILRTLIKIPDAAIFLQPVDPIRDGCPT 1694
Query: 141 YFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENN-VHKMAQELNN 199
Y+ I PMD T++ +L + Y D+F DV LT +N +NPP VH +
Sbjct: 1695 YYDEIQNPMDFSTMQAKLTQGEYQTMDDFAKDVELTLANCRQFNPPTTYPVH-----CAD 1749
Query: 200 LFDIKWKSLEEKWSSEVPK 218
+ + WKSL WS + K
Sbjct: 1750 VVEKAWKSL---WSKTMAK 1765
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISK--PMDLGTVKTRLDRNLYSVSDEFV 170
+++ L+ P +VF PVDPV L IP YF +I K DL T++ +LD Y D +
Sbjct: 1777 ILMNKLVADPVSFVFREPVDPVLLQIPTYFDVIPKKNARDLRTIRQKLDAEKYDSIDAWE 1836
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
AD+ L NA+L+N ++ V +A ++ + +
Sbjct: 1837 ADLDLMIENALLFNGADSEVGIIAAQVRDKY 1867
>gi|123233748|emb|CAM17899.1| bromodomain containing 2 [Mus musculus]
Length = 473
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 122
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 123 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 182
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 183 EQELVVTIPK 192
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 78 RSSILPFNKRQAQEVIEGPKDKRP------------KMDRGVTHQCSVILKSLM--MHPA 123
+++ LP +R++ I+ P+ P K+ + H C+ ILK L+ H A
Sbjct: 308 KAARLPPMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAA 366
Query: 124 -GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK 426
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSLEE 210
YNPP+++V MA++L ++F+ ++ + +
Sbjct: 427 YNPPDHDVVAMARKLQDVFEFRYAKMPD 454
>gi|74190894|dbj|BAE28228.1| unnamed protein product [Mus musculus]
Length = 473
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 122
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 123 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLKKIFLQKVASMPQE 182
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 183 EQELVVTIPK 192
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 78 RSSILPFNKRQAQEVIEGPKDKRP------------KMDRGVTHQCSVILKSLM--MHPA 123
+++ LP +R++ I+ P+ P K+ + H C+ ILK L+ H A
Sbjct: 308 KAARLPPMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAA 366
Query: 124 -GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK 426
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSLEE 210
YNPP+++V MA++L ++F+ ++ + +
Sbjct: 427 YNPPDHDVVAMARKLQDVFEFRYAKMPD 454
>gi|38541875|gb|AAH62700.1| BRDT protein, partial [Homo sapiens]
Length = 464
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II PMDL T+ RL+ Y+ + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIIKRLENKYYAKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 80 SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM---HPAGWVFNRPVDPVKL 136
++LP +++Q V K K+ + H CS ILK ++ W F PVD L
Sbjct: 252 NVLPDSQQQYNVV------KTVKVTEQLRH-CSEILKEMLAKKHFSYAWPFYNPVDVNAL 304
Query: 137 DIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQE 196
+ +Y+ ++ PMDLGT+K ++D Y + +F ADVRL F N YNPP++ V MA+
Sbjct: 305 GLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARM 364
Query: 197 LNNLFDIKWKSL 208
L ++F+ + +
Sbjct: 365 LQDVFETHFSKI 376
>gi|55725298|emb|CAH89514.1| hypothetical protein [Pongo abelii]
Length = 546
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 64 PGVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 123
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 124 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 184 EQELVVTIPK 193
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 78 RSSILPFNKRQAQEVIEGPKDKRP------------KMDRGVTHQCSVILKSLM--MHPA 123
+++ LP +R++ I+ P+ P K+ + H C+ ILK L+ H A
Sbjct: 309 KAARLPPMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAA 367
Query: 124 -GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK 427
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSLEE 210
YNPP+++V MA++L ++F+ ++ + +
Sbjct: 428 YNPPDHDVVAMARKLQDVFEFRYAKMPD 455
>gi|12802525|gb|AAK07919.1|AF318183_1 ring 3 [Mus musculus]
Length = 503
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 122
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 123 GTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 182
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 183 EQELVVTIPK 192
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 78 RSSILPFNKRQAQEVIEGPKDKRP------------KMDRGVTHQCSVILKSLM--MHPA 123
+++ LP +R++ I+ P+ P K+ + H C+ ILK L+ H A
Sbjct: 308 KAARLPPMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAA 366
Query: 124 -GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK 426
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSLEE 210
YNPP+++V MA++L ++F+ ++ + +
Sbjct: 427 YNPPDHDVVAMARKLQDVFEFRYAKMPD 454
>gi|380792435|gb|AFE68093.1| bromodomain-containing protein 3, partial [Macaca mulatta]
Length = 508
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 315 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 374
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
F ADVRL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 375 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
>gi|308800642|ref|XP_003075102.1| Vesicle trafficking protein Sly1 (Sec1 family) (ISS) [Ostreococcus
tauri]
gi|116061656|emb|CAL52374.1| Vesicle trafficking protein Sly1 (Sec1 family) (ISS) [Ostreococcus
tauri]
Length = 1086
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 107 VTH-QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR-NLYS 164
V H QC ++ L+ H G+ F PVDP LD+P Y II +PMDLGTVK ++ Y
Sbjct: 133 VVHKQCLTSVRQLIAHKWGFPFAAPVDPDALDLPTYREIIKEPMDLGTVKNLIENGGKYV 192
Query: 165 VSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
++E ADVRLTF+NAM +N +VH MA+EL ++ +W +++++
Sbjct: 193 KAEEVDADVRLTFANAMKFNAEGTDVHAMAKELLVEWETRWATIQQR 239
>gi|150866686|ref|XP_001386360.2| hypothetical protein PICST_73625 [Scheffersomyces stipitis CBS
6054]
gi|149387942|gb|ABN68331.2| transcription factor [Scheffersomyces stipitis CBS 6054]
Length = 636
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 94 EGPKDKRPKMDRGVTHQ--CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKP 148
E P D +P+ + CS +K LM + + F PVDPV L+IP+YF ++ +P
Sbjct: 289 EIPYDTKPRKKKFAAELRFCSQTVKELMSKKHNGYNFPFVAPVDPVALNIPNYFKVVKEP 348
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
MDLGT++++L N Y DEF D+RL F N ++NP + V+ M L +FD +W
Sbjct: 349 MDLGTIQSKLTNNQYENGDEFERDIRLVFKNCYIFNPEGSEVNMMGHRLEAVFDKRW 405
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 70 IASEHSKERSSILPFNKRQAQEVIEGPKDK-RPKMDRGVT-----HQCSVIL---KSLMM 120
I E SKE S ++P A PK P MD HQ L K++
Sbjct: 88 INVEESKEASPVVPATAGTAVFSEPAPKPAAEPDMDNLPANPLPPHQAKFALNTIKAIKR 147
Query: 121 HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
F PVD VKL+IP Y++ I +PMDL T++T++ N Y S++ V D L +N
Sbjct: 148 LRDAVPFLHPVDIVKLNIPFYYNYIPRPMDLSTIETKVHVNAYEDSNQIVEDFNLMVANC 207
Query: 181 MLYNPPENNVHKMAQELNNLFD 202
+N + KMA + F+
Sbjct: 208 KKFNGENAGISKMADNIQAHFE 229
>gi|62321808|dbj|BAD95432.1| RING3 protein-like [Arabidopsis thaliana]
Length = 386
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 14/145 (9%)
Query: 63 SSGGKKMIASE--HSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM 120
SSGGKK+ S+ +SK S+ +E +G P + R Q + + + +
Sbjct: 76 SSGGKKIAISQPNNSKGNSA--------GKEKSKGKHVSSPDLMR----QFATMFRQIAQ 123
Query: 121 HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
H W F PVD L + DY+ +I KPMDLGT+K +++ + YS E ADVRL F NA
Sbjct: 124 HKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNA 183
Query: 181 MLYNPPENNVHKMAQELNNLFDIKW 205
M YN + +V+ MA+ L F+ KW
Sbjct: 184 MRYNEEKEDVYVMAESLLEKFEEKW 208
>gi|62945212|dbj|BAD97681.1| open reading frame X [Mus musculus]
Length = 387
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 43 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 102
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 103 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 154
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 99 KRPKMDRGVTHQCSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 303 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 361
Query: 156 T 156
Sbjct: 362 V 362
>gi|410979451|ref|XP_003996097.1| PREDICTED: bromodomain-containing protein 3 [Felis catus]
Length = 695
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ + Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 157 RLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 332 KMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 383
>gi|348513555|ref|XP_003444307.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 810
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F PVD L + DY II+ PMDL T+K ++D+ Y +
Sbjct: 268 CNDILKELLSKRHSAYAWPFYVPVDAAALGLHDYHDIITHPMDLSTIKKKMDQREYGNAK 327
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP N V MA++L +F+ ++ L
Sbjct: 328 EFAADVRLMFSNCYKYNPPSNEVVHMARKLQEVFEARYLKL 368
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+L++L H W F++PVD V L +PDY++II+ PMDLGT+K RL + Y + + + D
Sbjct: 38 VVLQALWRHQYSWPFHQPVDAVALCLPDYYTIITNPMDLGTIKKRLKNSYYWQAVDCIDD 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 98 FNTMFTNCYVYNQPGDDIVFMAKTLEKLF 126
>gi|348511137|ref|XP_003443101.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 819
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 100 RP-KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL 158
RP +M + + ++KSL H W F PVD KL++PDY II +PMD+GT+K RL
Sbjct: 67 RPGRMTNQLQYLQKTLMKSLWRHHFAWPFQEPVDAYKLNLPDYHKIIKQPMDMGTIKKRL 126
Query: 159 DRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 127 ENNFYRSASECIQDFNTMFTNCYIYNKPTDDIVLMAQSLEKIF 169
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS +LK ++ H A W F PVD L + DY II PMDL T+K ++D Y +
Sbjct: 376 CSGLLKDMLSKKHAAYAWPFYTPVDAAALGLHDYHDIIKCPMDLSTIKRKMDCREYRDAQ 435
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
+F +DVRL FSN YNPP+++V MA++L ++F+ ++ + +
Sbjct: 436 QFASDVRLMFSNCYKYNPPDHDVVGMARKLQDVFEFRFAKMPD 478
>gi|148676421|gb|EDL08368.1| bromodomain containing 3, isoform CRA_c [Mus musculus]
Length = 516
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 48 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 107
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 108 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 159
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 308 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 366
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ + ++
Sbjct: 367 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 422
>gi|403261526|ref|XP_003923169.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 680
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 211 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 263
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 264 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 323
Query: 199 NLFDIKWKSL 208
++F+ ++ +
Sbjct: 324 DVFEFRYAKM 333
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
MD+GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 209 ---EEKWSSEVPK 218
E++ +PK
Sbjct: 61 PQEEQELVVTIPK 73
>gi|348576418|ref|XP_003473984.1| PREDICTED: bromodomain-containing protein 2 [Cavia porcellus]
Length = 802
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 63 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 122
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 123 GTIKRRLENTYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 182
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 183 EQELVVTIPK 192
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 330 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 382
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 383 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 442
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 443 DVFEFRYAKMPD 454
>gi|183396808|ref|NP_001116861.1| bromodomain containing 3a [Danio rerio]
Length = 683
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C VILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 299 CDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQDAQ 358
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
F ADVRL FSN YNPP++ V MA++L ++F++++ + ++ EVP
Sbjct: 359 TFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE-PVEVP 407
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD VKL +PDY II PMD+GT+K RL+ Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSASECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVALMPQEEVELLPPAPKGK 151
>gi|168002796|ref|XP_001754099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694653|gb|EDQ81000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 100 RPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL- 158
R K ++ + +Q I + + H W F +PVD L + DY +I KPMDLGT+K ++
Sbjct: 217 RSKRNQELMNQIRGIWRQISQHKWAWPFLKPVDVEGLGLHDYNDVIEKPMDLGTIKNKMD 276
Query: 159 --DRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
D + Y E D+RL FSNAM YNP ++VH M++ L++ F+ KWK+L E
Sbjct: 277 AKDTSGYQHVQEVCDDMRLVFSNAMTYNPEGSDVHVMSKTLSDKFEEKWKALIE 330
>gi|395832116|ref|XP_003789122.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Otolemur
garnettii]
Length = 680
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 211 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 263
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 264 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 323
Query: 199 NLFDIKWKSL 208
++F+ ++ +
Sbjct: 324 DVFEFRYAKM 333
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
MD+GT+K RL+ + Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 1 MDMGTIKRRLENSYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 209 ---EEKWSSEVPK 218
E++ +PK
Sbjct: 61 PQEEQELVVAIPK 73
>gi|395832114|ref|XP_003789121.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Otolemur
garnettii]
Length = 791
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 55 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 114
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--- 208
GT+K RL+ + Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 115 GTIKRRLENSYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 174
Query: 209 EEKWSSEVPK 218
E++ +PK
Sbjct: 175 EQELVVAIPK 184
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 322 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 374
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 375 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 434
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 435 DVFEFRYAKMPD 446
>gi|432847788|ref|XP_004066150.1| PREDICTED: uncharacterized protein LOC101159647 [Oryzias latipes]
Length = 1469
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F PVD VKL +PDY+ II PMD+GT+K RL+ N Y + E + D
Sbjct: 48 VVLKTLWKHHFAWPFQAPVDAVKLGLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 107
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 108 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 136
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ +LK ++ H A W F +PVD L + DY II PMDL T+K +LD Y +
Sbjct: 437 CARLLKEMLSKKHVAYAWPFYKPVDAKALGLHDYHDIIKHPMDLSTIKKKLDNRQYRDAQ 496
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--EEKWSSEVPKAGL 221
EF ADVRL FSN YNPP+++V MA++L ++F++++ + + + S+ VP L
Sbjct: 497 EFAADVRLMFSNCYKYNPPDHDVVSMARKLQDVFEMRFAKMPDDPEESTPVPAPSL 552
>gi|348574826|ref|XP_003473191.1| PREDICTED: bromodomain-containing protein 3-like [Cavia porcellus]
Length = 725
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ Y + E +
Sbjct: 44 NVVVKTLWRHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENTYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C IL+ ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 304 KKGKLSEHLRH-CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 362
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 363 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|195429272|ref|XP_002062687.1| GK19581 [Drosophila willistoni]
gi|194158772|gb|EDW73673.1| GK19581 [Drosophila willistoni]
Length = 293
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C V+LK+LM W+F PVDP L + DY I+ +PMD GT+K RLD + Y +
Sbjct: 19 CKVLLKNLMSPTYKKLAWIFYEPVDPQTLGLDDYLEIVKEPMDFGTIKQRLDADDYKDAM 78
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF DVRL F NA LY ++ +KMA+EL +F+ + L
Sbjct: 79 EFAKDVRLIFFNAYLYTNSDHVCYKMAKELQLIFEKMFTEL 119
>gi|417404197|gb|JAA48868.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 725
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ + Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 104 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 155
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C ILK L+ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 304 KKGKLSEHLRH-CDSILKELLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 362
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 363 KKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
>gi|410958888|ref|XP_003986045.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Felis catus]
Length = 684
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 211 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 263
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 264 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 323
Query: 199 NLFDIKWKSL 208
++F+ ++ +
Sbjct: 324 DVFEFRYAKM 333
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
MD+GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 209 ---EEKWSSEVPK 218
E++ +PK
Sbjct: 61 PQEEQELVVTIPK 73
>gi|387014800|gb|AFJ49519.1| bromodomain-containing protein 2-like [Crotalus adamanteus]
Length = 715
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 65 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 124
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ Y S E + D F+N +YN P +++ MAQ L +F
Sbjct: 125 GTIKRRLENGYYWSSGECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 174
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 71/120 (59%), Gaps = 9/120 (7%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II PMDL ++K +++ Y +
Sbjct: 358 CNGILKELVSKRHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSSIKRKMENREYRDAQ 417
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK------WSSEVPKAGL 221
EF +DVRL FSN YNPP+++V MA++L ++F+ + + ++ S+ +P+ GL
Sbjct: 418 EFASDVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPLHIGPPSTSLPQPGL 477
>gi|195060207|ref|XP_001995768.1| GH17935 [Drosophila grimshawi]
gi|193896554|gb|EDV95420.1| GH17935 [Drosophila grimshawi]
Length = 1220
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D + +
Sbjct: 518 CNEILKELFSKKHSGCAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREFKSAP 577
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL F+N YNPP+++V M ++L ++F++++ ++
Sbjct: 578 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 618
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 101 PKMDRGV--THQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTV 154
P +DR T+Q I+K++M H W F +PVD KL++PDY II +PMDLGT+
Sbjct: 27 PPIDRPGRNTNQLQYIIKTVMKFLWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTI 86
Query: 155 KTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
K RL+ N Y + E V D+ F+N +YN P +V MA L ++
Sbjct: 87 KKRLENNYYWSAKEAVNDINTMFTNCSVYNKPGEDVVVMAHALEKVY 133
>gi|344309215|ref|XP_003423272.1| PREDICTED: bromodomain-containing protein 3 [Loxodonta africana]
Length = 727
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ + Y + E +
Sbjct: 43 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQ 102
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 103 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 154
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 314 CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYPDAQ 373
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 374 SFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
>gi|159475920|ref|XP_001696062.1| Ring3 protein [Chlamydomonas reinhardtii]
gi|158275233|gb|EDP01011.1| Ring3 protein [Chlamydomonas reinhardtii]
Length = 798
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 96 PKDKRPKMD-------RGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKP 148
P KRPK+D + + C + L+ VF RPVDPV+ +PDY I P
Sbjct: 76 PDAKRPKLDSETDKKIQDIWRLCGSTVDYLLKKKNAQVFGRPVDPVRDGVPDYLKFILHP 135
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
MDLGT+K +L Y+ EF AD+RL +SN YN +V + +L++ F+ KW
Sbjct: 136 MDLGTIKAKLRERRYNDPREFAADMRLVWSNCRTYNQIGTSVRQWGDQLSDDFERKWADY 195
Query: 209 --EEKW 212
E++W
Sbjct: 196 NCEQRW 201
>gi|167395679|ref|XP_001741703.1| bromodomain-containing protein [Entamoeba dispar SAW760]
gi|165893699|gb|EDR21839.1| bromodomain-containing protein, putative [Entamoeba dispar SAW760]
Length = 481
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 54/98 (55%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C IL L + P F PVDP+ ++PDY+ +I PMDL T+ + +Y D+F
Sbjct: 271 CKQILNQLKLLPEANPFLTPVDPIAQNLPDYYVVIRHPMDLSTITKKFRYGIYEHIDDFA 330
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
DVRL F NAM YNPP N +H A L FD + K +
Sbjct: 331 NDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQIKEI 368
>gi|114108122|gb|AAI23311.1| LOC398944 protein [Xenopus laevis]
Length = 465
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
++LKSL H W F +PVD VKL++PDY+ II PMDL T++ RL+ N YS + + + D
Sbjct: 39 LVLKSLWRHQFSWPFQQPVDAVKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQD 98
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQEL F
Sbjct: 99 FNTMFTNCYIYNKPGDDIVLMAQELEKAF 127
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 110 QCSVILKSLMMHP---AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ IL +M W F + V P L DY + PMDLGT++ +++ LY +
Sbjct: 295 HCNNILNEMMSKKHAEYAWPFYKDVIPTSLL--DYSDAMKHPMDLGTIRDKMENGLYKDT 352
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+F +DVRL F N YNPP+N V MA++L ++F+
Sbjct: 353 QDFASDVRLMFMNCYKYNPPDNEVVNMARKLQDVFE 388
>gi|356526669|ref|XP_003531939.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 367
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q S IL+ + H W F PVD L + DY+ II KPMD GT+K+++ D Y
Sbjct: 90 LMRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKPMDFGTIKSKMEAKDGTGY 149
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAG 220
+ E ADVRL F NAM YN +N+VH MA+ L F EEKW +PK
Sbjct: 150 NNVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKF-------EEKWLQLLPKVA 199
>gi|449802362|pdb|4DON|A Chain A, Brd4 Bromodomain 1 Complex With A Fragment
3,4-dihydro-3-methyl-2(1h)- Quinazolinon
Length = 145
Score = 91.3 bits (225), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ P + T+Q V+LK+L H W F +PVD VKL++PDY+ II PMD+
Sbjct: 27 PETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDM 86
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MA+ L LF
Sbjct: 87 GTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 136
>gi|441594234|ref|XP_004092963.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Nomascus leucogenys]
Length = 682
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 211 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 263
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 264 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 323
Query: 199 NLFDIKWKSLEE 210
++F+ ++ + +
Sbjct: 324 DVFEFRYAKMPD 335
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
MD+GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 209 ---EEKWSSEVPK 218
E++ + +PK
Sbjct: 61 PQEEQELAVTIPK 73
>gi|255641563|gb|ACU21055.1| unknown [Glycine max]
Length = 363
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q S IL+ + H W F PVD L + DY+ II KPMD GT+K+++ D Y
Sbjct: 90 LMRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKPMDFGTIKSKMEAKDGTGY 149
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAG 220
+ E ADVRL F NAM YN +N+VH MA+ L F EEKW +PK
Sbjct: 150 NNVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKF-------EEKWLQLLPKVA 199
>gi|332823728|ref|XP_001167922.2| PREDICTED: bromodomain-containing protein 2 isoform 7 [Pan
troglodytes]
Length = 680
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 211 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 263
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 264 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 323
Query: 199 NLFDIKWKSL 208
++F+ ++ +
Sbjct: 324 DVFEFRYAKM 333
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
MD+GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 209 ---EEKWSSEVPK 218
E++ +PK
Sbjct: 61 PQEEQELVVTIPK 73
>gi|301608560|ref|XP_002933843.1| PREDICTED: bromodomain-containing protein 3 [Xenopus (Silurana)
tropicalis]
Length = 1013
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD KL++PDY+ II PMDL T++ RL+ N YS + + + D
Sbjct: 39 VVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQD 98
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ M+QEL +F
Sbjct: 99 FNTMFTNCYIYNKPGDDIVVMSQELEKVF 127
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 110 QCSVILKSLMMHP---AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ IL +M W F + V P L D I PMDL T++ +++ LY +
Sbjct: 296 HCNNILNEMMSKKHAEYAWPFYKTVIPTSL--LDCSDAIKHPMDLATIRDKMENGLYKDT 353
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+F +DVRL F N+ YNPP+N V MA+++ ++F+
Sbjct: 354 QDFASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFE 389
>gi|297661253|ref|XP_002809177.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Pongo
abelii]
Length = 681
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 211 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 263
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 264 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 323
Query: 199 NLFDIKWKSL 208
++F+ ++ +
Sbjct: 324 DVFEFRYAKM 333
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
MD+GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 209 ---EEKWSSEVPK 218
E++ +PK
Sbjct: 61 PQEEQELVVTIPK 73
>gi|348541135|ref|XP_003458042.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 821
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LKSL H W F+ PVD VKL++PDY II PMD+GT+K RL+ N Y + E + D
Sbjct: 86 VLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 145
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L F
Sbjct: 146 FNTMFTNCYIYNKPTDDIVLMAQSLEKAF 174
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 86 KRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYF 142
K+ + I P +R K+ + + CS +LK L+ H A W F +PVD L + DY
Sbjct: 369 KKDLPDSILPPPVRRSKLSPQMRY-CSGVLKELLSKKHAAYAWPFYKPVDASSLGLHDYH 427
Query: 143 SIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
II +PMDL T+K ++D Y + +F ADVRL FSN YNPP+++V MA++L ++F+
Sbjct: 428 DIIKQPMDLSTIKRKMDGREYREAHQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 487
Query: 203 I 203
Sbjct: 488 F 488
>gi|312373441|gb|EFR21184.1| hypothetical protein AND_17422 [Anopheles darlingi]
Length = 1442
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 29 CNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 88
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF ADVRL F+N YNPP+++V M ++L ++F+++ ++ ++ + V
Sbjct: 89 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRLANIPDEPVNNV 137
>gi|194696466|gb|ACF82317.1| unknown [Zea mays]
gi|413942791|gb|AFW75440.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR---NLY 163
+ Q V+LK + H W F PVD V L +PDY +II++PMD T++ +++R Y
Sbjct: 79 LMRQFGVLLKEITSHKDAWPFLEPVDVVTLQLPDYHNIITQPMDFSTIQKKMERKDGTCY 138
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
+ E +DVRL F+NAM YN +N +H MA+ L F+ KW K SE
Sbjct: 139 TNVREICSDVRLIFANAMKYNDDQNVIHLMAKSLLEKFEEKWLHFLPKVESE 190
>gi|426352679|ref|XP_004043837.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Gorilla
gorilla gorilla]
gi|52545711|emb|CAH56208.1| hypothetical protein [Homo sapiens]
gi|119624067|gb|EAX03662.1| bromodomain containing 2, isoform CRA_a [Homo sapiens]
Length = 681
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDI 138
LP +++Q Q +G K+ + H C+ ILK L+ H A W F +PVD L +
Sbjct: 211 LPDSQQQHQSSKKG------KLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGL 263
Query: 139 PDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
DY II PMDL TVK +++ Y + EF ADVRL FSN YNPP+++V MA++L
Sbjct: 264 HDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQ 323
Query: 199 NLFDIKWKSL 208
++F+ ++ +
Sbjct: 324 DVFEFRYAKM 333
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
MD+GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S+
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 209 ---EEKWSSEVPK 218
E++ +PK
Sbjct: 61 PQEEQELVVTIPK 73
>gi|116283260|gb|AAH05281.1| BRDT protein [Homo sapiens]
Length = 465
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L H W F RPVD VKL +PDY++II MDL T+K RL+ Y+ + E + D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNSMDLNTIKKRLENKYYAKASECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN P +++ MAQ L LF
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 80 SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM---HPAGWVFNRPVDPVKL 136
++LP +++Q V K K+ + H CS ILK ++ W F PVD L
Sbjct: 252 NVLPDSQQQYNVV------KTVKVTEQLRH-CSEILKEMLAKKHFSYAWPFYNPVDVNAL 304
Query: 137 DIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQE 196
+ +Y+ ++ PMDLGT+K ++D Y + +F ADVRL F N YNPP++ V MA+
Sbjct: 305 GLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARM 364
Query: 197 LNNLFDIKWKSL 208
L ++F+ + +
Sbjct: 365 LQDVFETHFSKI 376
>gi|255072301|ref|XP_002499825.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226515087|gb|ACO61083.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 675
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR-NLYSV 165
V QC LK LM H FN+PVD V L++P Y I+ +PMDLGTV+ + + +Y+
Sbjct: 288 VNRQCLAALKQLMAHKWAHPFNKPVDHVALNLPTYPEIVKRPMDLGTVEANIRKGGVYAC 347
Query: 166 SDEFVADVRLTFSNAMLYNP-PENNVHKMAQELNNLFDIKWKSLEEK 211
++E ADV L FSNA + P PE +VH MA L + +W ++ ++
Sbjct: 348 AEEVHADVSLVFSNAKTFTPKPEMDVHVMAVALEEFWAQRWAAVADR 394
>gi|224057449|ref|XP_002190567.1| PREDICTED: bromodomain testis-specific protein [Taeniopygia
guttata]
Length = 680
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 59/89 (66%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+++++ H W F++PVD L++PDY++II KPMDLGT+K RL+ N Y+ + E + D
Sbjct: 38 VVMRAMWRHNFSWPFHQPVDAAALNLPDYYTIIKKPMDLGTIKKRLEHNYYTKAAECIED 97
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+ F N +YN +++ MA+EL +F
Sbjct: 98 FKTMFWNCYMYNKSGDDIVFMAEELEKVF 126
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 106 GVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
G C+ ILK L H A W F +P D +I P DLGT+K ++D
Sbjct: 283 GKLKHCNAILKELFSKKHAAYAWPFIKPEDVASASTGANQAIAKYPTDLGTIKKKMDNFE 342
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y+ EF DVRL F + N ++ + MA++L ++F++ + +
Sbjct: 343 YNDIQEFATDVRLMFMSCYKRNSSDHEIVAMARKLQDVFEMHFAKI 388
>gi|195655085|gb|ACG47010.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR---NLY 163
+ Q V+LK + H W F PVD V L +PDY +II++PMD T++ +++R Y
Sbjct: 79 LMRQFGVLLKEITSHKDAWPFLEPVDVVTLQLPDYHNIITQPMDFSTIQKKMERKDGTCY 138
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
+ E +DVRL F+NAM YN +N +H MA+ L F+ KW K SE
Sbjct: 139 TNVREICSDVRLIFANAMKYNDDQNVIHLMAKSLLEKFEEKWLHFLPKVESE 190
>gi|120431736|ref|NP_473395.2| bromodomain testis-specific protein isoform A [Mus musculus]
gi|425906068|sp|Q91Y44.3|BRDT_MOUSE RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Bromodomain-containing female sterile homeotic-like
protein; AltName: Full=RING3-like protein
gi|148688221|gb|EDL20168.1| bromodomain, testis-specific [Mus musculus]
Length = 956
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN +++ MAQ L LF
Sbjct: 97 FNTMFSNCYLYNKTGDDIVVMAQALEKLF 125
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 107 VTHQ---CSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ P W F PVD L + +Y+ ++ PMDLGT+K ++D
Sbjct: 268 VTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDN 327
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
Y + EF ADVRL F N YNPP++ V MA+ L ++F++ +
Sbjct: 328 QEYKDAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHF 372
>gi|410926019|ref|XP_003976476.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 820
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LKSL H W F+ PVD VKL++PDY II PMD+GT+K RL+ N Y + E + D
Sbjct: 87 VLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 146
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L F
Sbjct: 147 FNTMFTNCYIYNKPTDDIVLMAQSLEKAF 175
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 111 CSVILKSLM--MHPAG--WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ +LK L+ H AG W F +PVD L + DY II +PMDL T+K ++D Y S
Sbjct: 394 CNGVLKELLSKKH-AGYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNREYLDS 452
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDI 203
+F ADVRL FSN YNPP+++V MA++L ++F+
Sbjct: 453 QQFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEF 489
>gi|13957951|gb|AAK50736.1| bromodomain-containing female sterile homeotic-like protein [Mus
musculus]
Length = 956
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN +++ MAQ L LF
Sbjct: 97 FNTMFSNCYLYNKTGDDIVVMAQALEKLF 125
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 107 VTHQ---CSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ P W F PVD L + +Y+ ++ PMDLGT+K ++D
Sbjct: 268 VTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDN 327
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
Y + EF ADVRL F N YNPP++ V MA+ L ++F++ +
Sbjct: 328 QEYKDAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHF 372
>gi|198282051|ref|NP_001128282.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
gi|197245764|gb|AAI68574.1| brd2 protein [Xenopus (Silurana) tropicalis]
Length = 758
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V++KSL H W F +PVD VKL +PDY II +PMD+GT+K RL+ N Y + E + D
Sbjct: 65 VVMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKKRLENNYYWSALECMQD 124
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L +F
Sbjct: 125 FNTMFTNCYIYNKPTDDIVLMAQSLEKMF 153
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY+ II PMDL T+K ++D + +
Sbjct: 327 CNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKMDNREFKDAQ 386
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF A VRL FSN YNPP+++V MA++L ++F+ ++
Sbjct: 387 EFAAAVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 424
>gi|197304540|dbj|BAG69474.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II PMD+
Sbjct: 17 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKLPMDM 76
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 77 GTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 126
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II PMDL T+K +++ Y +
Sbjct: 304 CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQ 363
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP+++V MA++L ++F+ + +
Sbjct: 364 EFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
>gi|347968593|ref|XP_003436250.1| AGAP002807-PB [Anopheles gambiae str. PEST]
gi|333467932|gb|EGK96763.1| AGAP002807-PB [Anopheles gambiae str. PEST]
Length = 1778
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 411 CNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 470
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF ADVRL F+N YNPP+++V M ++L ++F+++ ++ ++ + V
Sbjct: 471 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRLANIPDEPVNNV 519
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 107 VTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
+T+Q +L+++M H W F +PVD KL++PDY II +PMDLGT+K RL+ N
Sbjct: 33 LTNQLHFLLRTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNY 92
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV----PK 218
Y S E + D F+N +YN P +V MAQ L LF K SL K +E+ PK
Sbjct: 93 YWTSKECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKLFLTKV-SLMPKDETEMEVQQPK 151
Query: 219 AG 220
G
Sbjct: 152 GG 153
>gi|63100514|gb|AAH95027.1| Brd3a protein [Danio rerio]
Length = 513
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C VILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 299 CDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQDAQ 358
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
F ADVRL FSN YNPP++ V MA++L ++F++++ + ++ EVP
Sbjct: 359 TFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE-PVEVP 407
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++++L H W F +PVD VKL +PDY II PMD+GT+K RL+ Y + E +
Sbjct: 40 NVVVETLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSASECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVALMPQEEVELLPPAPKGK 151
>gi|38014413|gb|AAH60452.1| LOC398944 protein, partial [Xenopus laevis]
Length = 466
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
++LKSL H W F +PVD VKL++PDY+ II PMDL T++ RL+ N YS + + + D
Sbjct: 39 LVLKSLWRHQFSWPFQQPVDAVKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQD 98
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQEL F
Sbjct: 99 FNTMFTNCYIYNKPGDDIVLMAQELEKAF 127
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 110 QCSVILKSLMMHP---AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ IL +M W F + V P L DY + PMDLGT++ +++ LY +
Sbjct: 295 HCNNILNEMMSKKHAEYAWPFYKDVIPTSLL--DYSDAMKHPMDLGTIRDKMENGLYKDT 352
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+F +DVRL F N YNPP+N V MA++L ++F+
Sbjct: 353 QDFASDVRLMFMNCYKYNPPDNEVVNMARKLQDVFE 388
>gi|47212213|emb|CAF94980.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K P++ + H C ILK ++ H A W F +PVD L++ DY II PMDL T++
Sbjct: 279 KGPQLGEQMKH-CDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIR 337
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL-EEKWSS 214
++D+ YS F DVRL FSN YNPP++ V MA++L ++F++++ + +E +
Sbjct: 338 KKMDKGEYSEPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKIPDEGLEA 397
Query: 215 EVP 217
VP
Sbjct: 398 SVP 400
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL + DY +I PMD+GT+K RL+ N Y + +
Sbjct: 25 NVVVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRLENNYYWSASGAMQ 84
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMME 231
D F+N +YN P +++ MAQ L +F K + ++ + +P A GK K +
Sbjct: 85 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVALLPPAPKGK---NKSKQ 141
Query: 232 VNDTRQNCPKTPP 244
+ P TPP
Sbjct: 142 PSAATTGAPPTPP 154
>gi|47216871|emb|CAG11678.1| unnamed protein product [Tetraodon nigroviridis]
Length = 834
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LKSL H W F+ PVD VKL++PDY II PMD+GT+K RL+ N Y + E + D
Sbjct: 58 VLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 117
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L F
Sbjct: 118 FNTMFTNCYIYNKPTDDIVLMAQSLEKAF 146
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 111 CSVILKSLM--MHPAG--WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ +LK L+ H AG W F +PVD L + DY II +PMDL T+K ++D Y S
Sbjct: 408 CNGVLKELLSKKH-AGYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNREYLDS 466
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDI 203
+F ADVRL FSN YNPP+++V MA++L ++F+
Sbjct: 467 QQFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEF 503
>gi|33416865|gb|AAH55543.1| Brd3a protein [Danio rerio]
Length = 515
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C VILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 298 CDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQDAQ 357
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
F ADVRL FSN YNPP++ V MA++L ++F++++ + ++ EVP
Sbjct: 358 TFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE-PVEVP 406
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD VKL +PDY II PMD+GT+K RL+ Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSASECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 100 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVALMPQEEVELLPPAPKGK 151
>gi|355561582|gb|EHH18214.1| hypothetical protein EGK_14770 [Macaca mulatta]
Length = 862
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 78 RSSILPFNKRQAQEVIEGPKDKRP------------KMDRGVTHQCSVILKSLM--MHPA 123
+++ LP +R++ I+ P+ P K+ + H C+ ILK L+ H A
Sbjct: 369 KAARLPPMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKH-CNGILKELLSKKHAA 427
Query: 124 -GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
W F +PVD L + DY II PMDL TVK +++ Y + EF ADVRL FSN
Sbjct: 428 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK 487
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSLEE 210
YNPP+++V MA++L ++F+ ++ + +
Sbjct: 488 YNPPDHDVVAMARKLQDVFEFRYAKMPD 515
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q V++K+L H W F +PVD VKL +PDY II +PMD+
Sbjct: 124 PEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDM 183
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
GT+K RL+ + + E + D+ F+N +YN P +++ MAQ L +F K S+ +
Sbjct: 184 GTIKRRLENSYCWAASECMEDLNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQ 242
>gi|426020769|sp|F7DRV9.1|BRDT_XENTR RecName: Full=Bromodomain testis-specific protein
Length = 933
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD KL++PDY+ II PMDL T++ RL+ N YS + + + D
Sbjct: 39 VVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQD 98
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ M+QEL +F
Sbjct: 99 FNTMFTNCYIYNKPGDDIVVMSQELEKVF 127
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 110 QCSVILKSLMMHP---AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ IL +M W F + V P L D I PMDL T++ +++ LY +
Sbjct: 286 HCNNILNEMMSKKHAEYAWPFYKTVIPTSLL--DCSDAIKHPMDLATIRDKMENGLYKDT 343
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+F +DVRL F N+ YNPP+N V MA+++ ++F+
Sbjct: 344 QDFASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFE 379
>gi|50553560|ref|XP_504191.1| YALI0E20537p [Yarrowia lipolytica]
gi|49650060|emb|CAG79786.1| YALI0E20537p [Yarrowia lipolytica CLIB122]
Length = 653
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ +LK L + F PVDPV L+ P YF II +PMDL TV+ +++ N Y +D
Sbjct: 314 CNQVLKELTSKKHEEYSFPFLLPVDPVALNCPSYFKIIKEPMDLSTVQEKMNNNAYETAD 373
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF +DVRL F N +NP V+KM + L +FD KW
Sbjct: 374 EFESDVRLIFKNCYRFNPDGTPVNKMGKRLEAIFDKKW 411
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPVKL+IP YF +I PMDLGT++ +L+ Y ++ +ADV+ N + +N
Sbjct: 145 FIHPVDPVKLNIPTYFEVIKHPMDLGTMEKKLNNGEYGTKEDMIADVQRIVDNCLTFNGA 204
Query: 187 ENNVHKMAQELNNLFD 202
++ + MA+ L F+
Sbjct: 205 DSFISSMAKSLFTSFE 220
>gi|62122590|dbj|BAD93258.1| RING3 [Oryzias latipes]
Length = 814
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LKSL H W F+ PVD KL++PDY II PMD+GT+K RL+ N Y + E + D
Sbjct: 84 VVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 143
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPKAGLGKILSG 227
F+N +YN P +++ MAQ L F K + E + VP++ KI G
Sbjct: 144 FNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEEIELPPPVPRSKQSKISGG 201
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS +LK L+ H A W F +PVD V L + DY II PMDL T+K ++D Y +
Sbjct: 386 CSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGREYREAQ 445
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDI 203
+F ADVRL FSN YNPP+++V MA++L ++F+
Sbjct: 446 QFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEF 481
>gi|410919159|ref|XP_003973052.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 590
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS +LK ++ + W F PVD V L + DY II +PMDL T++ ++D+ Y+
Sbjct: 275 CSGVLKEMLSKRHYACAWPFYSPVDVVALGLHDYHDIIKQPMDLSTIRKKMDQGEYAQPA 334
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF ADVRL FSN YNPP + V MA++L +F+ ++
Sbjct: 335 EFAADVRLMFSNCYKYNPPSHEVVHMARKLQEVFEARY 372
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ PK VT+Q + V++K+L H W F RPVD V L +PDY+++I+ PMDL
Sbjct: 40 PEASNPKRPGRVTNQLNYLEKVVIKALWRHHFSWPFQRPVDAVALGLPDYYTVITNPMDL 99
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNL 200
T+ RL Y + E + D+ FSN +YN P + + MAQ L L
Sbjct: 100 STIMMRLKNKYYWQALECIQDLNTMFSNCYVYNQPGDGIVFMAQTLEKL 148
>gi|198425802|ref|XP_002127242.1| PREDICTED: similar to bromodomain-containing protein 2 [Ciona
intestinalis]
Length = 1083
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 97 KDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLG 152
K +P+ R VT+Q V++ SL H W F+ PVDPVKL +PDYF II PMD+
Sbjct: 26 KPNQPRRGR-VTNQLQYLRKVVMTSLWKHHFAWPFHVPVDPVKLGLPDYFDIIKHPMDMA 84
Query: 153 TVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+K +L+ N Y + E + D L FSN +YN P ++V MAQ L F
Sbjct: 85 LIKKKLETNQYYSAKECLQDFNLMFSNCYIYNKPTDDVVLMAQTLEKNF 133
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 76/125 (60%), Gaps = 7/125 (5%)
Query: 98 DKRPKMDRGVTHQ---CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDL 151
+KRPKM + +T Q C+ +LK H + W F + VD L + DY+ +I PMDL
Sbjct: 347 NKRPKMVK-LTEQMKYCNNLLKDFFSKKHASFSWPFYKSVDADLLGLHDYYDMIKNPMDL 405
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
GT++ +++ Y DEF D+RL +N YNPP+++V MA++L+++F++K+ + ++
Sbjct: 406 GTMRKKMESREYRTPDEFAYDMRLIVTNCYKYNPPDHDVVAMAKKLSDVFEMKFAKMPDE 465
Query: 212 WSSEV 216
S+
Sbjct: 466 PRSDF 470
>gi|448531883|ref|XP_003870352.1| Bdf1 transcription factor [Candida orthopsilosis Co 90-125]
gi|380354706|emb|CCG24222.1| Bdf1 transcription factor [Candida orthopsilosis]
Length = 730
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 94 EGPKDKRPKMDRGVTHQ--CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKP 148
E P D RP+ + C+ +K LM + + F PVD V L++P+Y I+ +P
Sbjct: 363 ELPYDVRPRKKKFAAELRFCNQTIKELMSKKHYNYNFPFLAPVDAVALNLPNYHEIVKEP 422
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
MDLGT++++L NLY +DEF D+RL F N +NP +V+ M L +FD KW
Sbjct: 423 MDLGTIQSKLTNNLYENADEFEKDIRLMFRNCYAFNPEGTDVNMMGHRLEAIFDKKW 479
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVD VKL++P Y++ I +PMDL T++ +++ N Y + V D L N +N
Sbjct: 225 FLAPVDTVKLNVPFYYNYIPRPMDLLTIERKINANAYEEISQVVDDFNLMVDNCKKFNGE 284
Query: 187 ENNVHKMAQELNNLFD 202
+ KMA + F+
Sbjct: 285 AAGISKMATNIQAHFE 300
>gi|224473811|gb|ACN49152.1| bromodomain containing 2 [Oryzias dancena]
Length = 826
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LKSL H W F+ PVD VKL +PDY II PMD+GT+K RL+ N Y + E + D
Sbjct: 84 VVLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 143
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L F
Sbjct: 144 FNAMFTNCYIYNKPTDDIVLMAQSLEKAF 172
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS +LK L+ H A W F +PVD V L + DY II +PMDL T+K ++D Y +
Sbjct: 395 CSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKQPMDLSTIKRKMDSREYRDAQ 454
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDI 203
+F ADVRL FSN YNPP+++V MA++L ++F+
Sbjct: 455 QFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEF 490
>gi|145347731|ref|XP_001418315.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578544|gb|ABO96608.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 610
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR-NLYSV 165
V QC ++ LM H G+ F+ PVDP L +P Y II++PMDLGT+K ++ Y +
Sbjct: 282 VHKQCLSAVRQLMAHKWGFPFSAPVDPDALGLPTYREIITEPMDLGTIKKLIENGGKYVM 341
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
++E ADVRLTF+NAM +N +VH MA L + ++ KW++++++
Sbjct: 342 AEEVDADVRLTFANAMKFNNEGTDVHTMACGLLDEWEPKWEAIKQR 387
>gi|417404059|gb|JAA48805.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 707
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C ILK L+ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 286 KKGKLSEHLRH-CDSILKELLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 344
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 345 KKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 397
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ + Y + E +
Sbjct: 44 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQ 103
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMME 231
D F+N +YN V +M QE L K K ++ AG ++ + +
Sbjct: 104 DFNTMFTNCYIYN---KKVAQMPQEEVELLPPAPKGKGRKPAAGAQSAGTQQVAAMPSVS 160
Query: 232 VNDTRQNCP 240
QN P
Sbjct: 161 PATPFQNVP 169
>gi|241604623|ref|XP_002405922.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
gi|215502589|gb|EEC12083.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
Length = 885
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
P K+ + + + V++K++ H W F +PVD V+L++PDY II PMDLGT+K
Sbjct: 28 PASKKHRNTNQLQYLLRVVMKAIWKHQFAWPFQQPVDTVRLNLPDYHRIIDHPMDLGTIK 87
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIK 204
RL+ Y+ + E + D F+N +YN P +V MAQ L LF K
Sbjct: 88 KRLENYYYASASECIQDFNTMFTNCYVYNKPGEDVVLMAQALEKLFLTK 136
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Query: 111 CSVILKSLMM--HPAG--WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ ILK L H AG W F +PVD L + DY II PMDLGTVK ++D Y
Sbjct: 400 CNSILKELFAKKH-AGYAWPFYKPVDADLLGLHDYHEIIKHPMDLGTVKQKMDNREYKSP 458
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+EF DVRL F+N YNPP++ V MA++L ++F++++ +
Sbjct: 459 EEFAGDVRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRYAKM 500
>gi|30686240|ref|NP_181036.2| Transcription factor GTE6 [Arabidopsis thaliana]
gi|75148956|sp|Q84XV2.1|GTE1_ARATH RecName: Full=Transcription factor GTE1; AltName:
Full=Bromodomain-containing protein GTE1; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E1;
AltName: Full=Protein IMBIBITION-INDUCIBLE 1
gi|27803868|gb|AAO22056.1| IMB1 [Arabidopsis thaliana]
gi|110741364|dbj|BAF02232.1| RING3 protein-like [Arabidopsis thaliana]
gi|111074406|gb|ABH04576.1| At2g34900 [Arabidopsis thaliana]
gi|330253943|gb|AEC09037.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 386
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 14/145 (9%)
Query: 63 SSGGKKMIASE--HSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM 120
+SGGKK+ S+ +SK S+ +E +G P + R Q + + + +
Sbjct: 76 NSGGKKIAISQPNNSKGNSA--------GKEKSKGKHVSSPDLMR----QFATMFRQIAQ 123
Query: 121 HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
H W F PVD L + DY+ +I KPMDLGT+K +++ + YS E ADVRL F NA
Sbjct: 124 HKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNA 183
Query: 181 MLYNPPENNVHKMAQELNNLFDIKW 205
M YN + +V+ MA+ L F+ KW
Sbjct: 184 MRYNEEKEDVYVMAESLLEKFEEKW 208
>gi|327270741|ref|XP_003220147.1| PREDICTED: bromodomain testis-specific protein-like [Anolis
carolinensis]
Length = 900
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V++K++ H W F++PVD L +PDY++II PMDL T++ RL+ N Y+ + E + +
Sbjct: 81 VVMKAMWRHSFSWPFHQPVDAAGLKLPDYYNIIKNPMDLTTIQKRLEHNYYTCAAECIEN 140
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF--DIKWKSLEEK 211
+ F+N LYN P +++ MAQEL +F I LEEK
Sbjct: 141 FKTMFANCYLYNKPGDDIVFMAQELEKVFMQKIAQMPLEEK 181
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ IL + H A W+F +P+D + DY ++ PMDLGT+K +++ N Y +
Sbjct: 321 CNEILTEMFSKQHEAYAWLFYKPIDVTAPGLEDYNDVVKCPMDLGTIKKKMENNAYKDTQ 380
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
EF AD+RL F N Y+ P+ V MA++L ++F++ + + ++ +S P
Sbjct: 381 EFAADIRLMFMNCYRYSSPDQEVVTMARKLQDVFEMHFAKIPDEPTSHKP 430
>gi|392571704|gb|EIW64876.1| Bromodomain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 749
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 119 MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFS 178
+ HP F PVDPVK+ IP+Y ++ KPMDL T+K +LD YS +++F D RL
Sbjct: 422 IAHP----FYEPVDPVKMGIPEYPKVVKKPMDLATMKKKLDAGEYSTAEKFREDFRLMVK 477
Query: 179 NAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
N M +NPP N VH+ + L LF+ KWK+L
Sbjct: 478 NCMTFNPPGNPVHEAGKALQVLFEEKWKNL 507
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 12/94 (12%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL--------DRNL----YSVSDEFVADVR 174
F PVDPV L IP Y +II PMD +++ +L D N Y D+ VAD+R
Sbjct: 223 FLNPVDPVALGIPHYPTIIKHPMDFSSIERKLTTSNPAKPDPNPANPRYGSVDDIVADIR 282
Query: 175 LTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
L F+N + +N P++ V +M + + +FD + K +
Sbjct: 283 LIFANCLTFNGPDHPVTQMGKRVEAVFDKQVKQM 316
>gi|428182995|gb|EKX51854.1| hypothetical protein GUITHDRAFT_49703, partial [Guillardia theta
CCMP2712]
Length = 75
Score = 90.5 bits (223), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 54/75 (72%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
FN PVDPV L+IP Y +I PMDLGTV ++L+ Y +++VADV+L + NAM++NPP
Sbjct: 1 FNVPVDPVALNIPTYLDVIKNPMDLGTVLSKLENGFYERKEQWVADVKLVWENAMVFNPP 60
Query: 187 ENNVHKMAQELNNLF 201
N+VH+ A+ + + F
Sbjct: 61 GNDVHECARHMASYF 75
>gi|347968595|ref|XP_312107.4| AGAP002807-PA [Anopheles gambiae str. PEST]
gi|333467931|gb|EAA07774.4| AGAP002807-PA [Anopheles gambiae str. PEST]
Length = 870
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 411 CNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 470
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
EF ADVRL F+N YNPP+++V M ++L ++F+++ ++ ++ + V
Sbjct: 471 EFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRLANIPDEPVNNV 519
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 107 VTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
+T+Q +L+++M H W F +PVD KL++PDY II +PMDLGT+K RL+ N
Sbjct: 33 LTNQLHFLLRTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNY 92
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV----PK 218
Y S E + D F+N +YN P +V MAQ L LF K SL K +E+ PK
Sbjct: 93 YWTSKECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKLFLTKV-SLMPKDETEMEVQQPK 151
Query: 219 AG 220
G
Sbjct: 152 GG 153
>gi|348505480|ref|XP_003440289.1| PREDICTED: bromodomain-containing protein 3-like [Oreochromis
niloticus]
Length = 513
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
++++KSL H W F +PVD V L +PDY II+ PMD+GT+K RL+ N Y + E +
Sbjct: 38 NIVIKSLWRHQFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKRLENNYYWSASECLQ 97
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MA L ++ K + + VP A GK
Sbjct: 98 DFNTMFTNCYIYNKPTDDIVLMALALEKIYLQKVAQMPQSEVEIVPHAAKGK 149
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK ++ H A W F +PVD L + DY II PMDL TVK ++D Y +
Sbjct: 193 CNHILKEMLSKKHSAYAWPFYKPVDAEALQLHDYHDIIKYPMDLSTVKKKMDAGEYQDAQ 252
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAG 220
F ADVRL FSN YNP ++V A++L +F+ ++ + ++ +AG
Sbjct: 253 AFAADVRLIFSNCYKYNPAHHDVVIKARKLQGIFEQRFAKMPDEHVEVTSQAG 305
>gi|354544706|emb|CCE41432.1| hypothetical protein CPAR2_304210 [Candida parapsilosis]
Length = 748
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 94 EGPKDKRPKMDRGVTHQ--CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKP 148
E P D RP+ + C+ +K LM + + F PVD V L++P+Y I+ +P
Sbjct: 373 ELPYDVRPRKKKFAAELRFCNQTIKELMSKKHYNYNFPFLAPVDAVALNLPNYHDIVKEP 432
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
MDLGT++++L NLY +D+F DVRL F N +NP +V+ M L +FD KW
Sbjct: 433 MDLGTIQSKLTNNLYENADDFEKDVRLVFRNCYAFNPEGTDVNMMGHRLEAIFDKKW 489
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVD VKL++P Y++ I +PMDL T++ +++ N Y + V D L N +N
Sbjct: 232 FLAPVDTVKLNVPFYYNYIPRPMDLSTIERKINANAYEDIAQVVDDFNLMVENCKKFNGE 291
Query: 187 ENNVHKMAQELN-----NLFDIKWKSLEEKWSSEVPKAGLG 222
+ KMA + ++ ++ K L S+ + K+G G
Sbjct: 292 AAGISKMATNIQAHFEKHMLNVPPKELPAVVSASISKSGSG 332
>gi|3033386|gb|AAC12830.1| putative RING3 protein [Arabidopsis thaliana]
Length = 400
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 14/145 (9%)
Query: 63 SSGGKKMIASE--HSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM 120
+SGGKK+ S+ +SK S+ +E +G P + R Q + + + +
Sbjct: 76 NSGGKKIAISQPNNSKGNSA--------GKEKSKGKHVSSPDLMR----QFATMFRQIAQ 123
Query: 121 HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
H W F PVD L + DY+ +I KPMDLGT+K +++ + YS E ADVRL F NA
Sbjct: 124 HKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNA 183
Query: 181 MLYNPPENNVHKMAQELNNLFDIKW 205
M YN + +V+ MA+ L F+ KW
Sbjct: 184 MRYNEEKEDVYVMAESLLEKFEEKW 208
>gi|224473804|gb|ACN49148.1| bromodomain containing 2 [Oryzias dancena]
Length = 610
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LKSL H W F+ PVD VKL +PDY II PMD+GT+K RL+ N Y + E + D
Sbjct: 84 VVLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 143
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L F
Sbjct: 144 FNAMFTNCYIYNKPTDDIVLMAQSLEKAF 172
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS +LK L+ H A W F +PVD V L + DY II +PMDL T+K ++D Y +
Sbjct: 395 CSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKQPMDLSTIKRKMDSREYRDAQ 454
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDI 203
+F ADVRL FSN YNPP+++V MA++L ++F+
Sbjct: 455 QFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEF 490
>gi|14164429|dbj|BAB55682.1| P0047B08.5 [Oryza sativa Japonica Group]
Length = 370
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 63/99 (63%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C +L L+ H GWVF PVD L + DY+ IS PMDLGTV+ RL+R Y+ F
Sbjct: 180 RCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRRYADPWAF 239
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
ADVRLTF+NAM YN + V++ A EL+ +F+ W S+
Sbjct: 240 AADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGWPSV 278
>gi|428181666|gb|EKX50529.1| hypothetical protein GUITHDRAFT_135178 [Guillardia theta CCMP2712]
Length = 133
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 125 WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYN 184
W F PVDPV ++ DYF ++ +PMDLGTV +L+ N YS + DV TF NA LYN
Sbjct: 8 WPFLEPVDPVSMNAYDYFEVVKRPMDLGTVDKKLENNQYSTCAYLLYDVLSTFKNACLYN 67
Query: 185 PPENNVHKMAQEL 197
PPEN VH++AQ++
Sbjct: 68 PPENKVHQLAQDM 80
>gi|371927839|pdb|4A9E|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927840|pdb|4A9E|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927841|pdb|4A9E|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927842|pdb|4A9F|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927843|pdb|4A9F|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927844|pdb|4A9F|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927869|pdb|4A9H|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927870|pdb|4A9H|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927871|pdb|4A9H|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927872|pdb|4A9I|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927873|pdb|4A9I|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927874|pdb|4A9I|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927875|pdb|4A9J|A Chain A, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927876|pdb|4A9J|B Chain B, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927877|pdb|4A9J|C Chain C, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|374977910|pdb|4A9M|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977911|pdb|4A9M|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977912|pdb|4A9M|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977913|pdb|4A9N|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977914|pdb|4A9N|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977915|pdb|4A9N|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977916|pdb|4A9O|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977917|pdb|4A9O|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977918|pdb|4A9O|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|383875671|pdb|4ALH|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875672|pdb|4ALH|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875673|pdb|4ALH|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|393715366|pdb|4ALG|A Chain A, N-Terminal Bromodomain Of Human Brd2 With Ibet-151
Length = 154
Score = 90.5 bits (223), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/134 (38%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Query: 92 VIEGPKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISK 147
V G PK VT+Q V++K+L H W F +PVD VKL +PDY II +
Sbjct: 14 VPRGSHMSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQ 73
Query: 148 PMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
PMD+GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S
Sbjct: 74 PMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAS 133
Query: 208 L---EEKWSSEVPK 218
+ E++ +PK
Sbjct: 134 MPQEEQELVVTIPK 147
>gi|328703281|ref|XP_001944541.2| PREDICTED: hypothetical protein LOC100164694 [Acyrthosiphon pisum]
Length = 1162
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
++K+L H W F +PVD KL++PDY +I PMDLGTVK RL+ N Y +DE + D
Sbjct: 79 TVMKALWKHQHAWPFYQPVDASKLNLPDYHKVIKTPMDLGTVKKRLENNYYWCADECIQD 138
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+ FSN YN P +V MAQ L +F
Sbjct: 139 INAMFSNCYTYNKPGEDVVLMAQTLEKIF 167
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ +LK L H A W F +PVD L + DY II KPMDLGTVKT+LD Y S
Sbjct: 346 CTEVLKELFTKKHAAYAWPFYKPVDAAWLGLHDYHDIIKKPMDLGTVKTKLDNREYKNSK 405
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIK 204
+F ADV L FSN YNP +++V MA++L +F+ K
Sbjct: 406 DFAADVNLIFSNCYKYNPKDHDVVAMAKKLQAVFEAK 442
>gi|391337779|ref|XP_003743242.1| PREDICTED: bromodomain testis-specific protein-like [Metaseiulus
occidentalis]
Length = 802
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 108 THQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
T+Q +LK +M H W F +PVD +KL++PDYF II PMDLGT+K RL+ Y
Sbjct: 69 TNQLQFMLKHVMKAVWKHNFAWPFQQPVDTIKLNLPDYFKIIKVPMDLGTIKKRLENCYY 128
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+ E + D + FSN +YN P +V MAQ L LF
Sbjct: 129 YDAQECINDFNVLFSNCYIYNKPGEDVVLMAQSLEKLF 166
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 69/111 (62%), Gaps = 4/111 (3%)
Query: 97 KDKRPKMDRGVTHQCSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGT 153
K KR KM + + C+ I+K L H A W F VD L + DY+ II++PMDLGT
Sbjct: 386 KVKRGKMTEKLKY-CNSIIKELFAKKHSAYAWPFYTAVDVEGLGLHDYYDIITQPMDLGT 444
Query: 154 VKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIK 204
+KT+++R Y D+F DVRL F N YNP ++ V KMA++L ++F++K
Sbjct: 445 IKTKMERREYRNPDDFCNDVRLVFMNCYKYNPADHEVVKMARKLQDVFEMK 495
>gi|379642603|ref|NP_001243832.1| bromodomain containing 3 [Xenopus (Silurana) tropicalis]
Length = 795
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD VKL++PDY II PMD+GT+K RL+ N Y ++E +
Sbjct: 40 NVVVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSANECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN +++ MAQ L +F K + ++ +P A GK
Sbjct: 100 DFNTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 151
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK ++ H A W F +PVD L++ DY II PMDL +VK ++D Y+ +
Sbjct: 367 CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMDAREYADAQ 426
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 427 AFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 467
>gi|33417197|gb|AAH55508.1| Brd2b protein [Danio rerio]
gi|159155579|gb|AAI54432.1| Brd2b protein [Danio rerio]
Length = 558
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS +LK L+ H A W F +PVD L + DY II PMDL T+K ++D Y +
Sbjct: 343 CSGVLKELLSKKHVAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTIKRKMDEREYREAQ 402
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
+F ADVRL FSN YNPP+++V MA++L ++F+ ++ + ++ S E
Sbjct: 403 QFSADVRLMFSNCYKYNPPDHDVVSMARKLQDVFEFRFAKMPDEVSDE 450
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 56/89 (62%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V++K+L H W F+ PVD +L++PDY II +PMD+GT+K RL+ N Y + E + D
Sbjct: 59 VLVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRLENNYYRGASECLQD 118
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L +F
Sbjct: 119 FNTMFTNCYIYNKPTDDIVLMAQSLEKVF 147
>gi|340707459|pdb|2YDW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707460|pdb|2YDW|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707461|pdb|2YDW|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707481|pdb|2YEK|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707482|pdb|2YEK|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707483|pdb|2YEK|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|393715359|pdb|4AKN|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715360|pdb|4AKN|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715361|pdb|4AKN|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
Length = 153
Score = 90.1 bits (222), Expect = 3e-15, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 92 VIEGPKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISK 147
V G PK VT+Q V++K+L H W F +PVD VKL +PDY II +
Sbjct: 14 VPRGSHMSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQ 73
Query: 148 PMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
PMD+GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L +F K S
Sbjct: 74 PMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAS 133
Query: 208 LEEK 211
+ ++
Sbjct: 134 MPQE 137
>gi|261278845|pdb|3JVJ|A Chain A, Crystal Structure Of The Bromodomain 1 In Mouse Brd4
gi|261278846|pdb|3JVK|A Chain A, Crystal Structure Of Bromodomain 1 Of Mouse Brd4 In
Complex With Histone H3-K(Ac)14
gi|302566174|pdb|3MUK|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Propionylated
Histone H3- K(Prop)23
gi|302566176|pdb|3MUL|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Butyrylated
Histone H3- K(Buty)14
Length = 131
Score = 90.1 bits (222), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ P + T+Q V+LK+L H W F +PVD VKL++PDY+ II PMD+
Sbjct: 11 PETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDM 70
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MA+ L LF
Sbjct: 71 GTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 120
>gi|440904692|gb|ELR55166.1| Bromodomain-containing protein 3, partial [Bos grunniens mutus]
Length = 613
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 110 QCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C ILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 243 HCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYPDA 302
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 303 QGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 344
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 140 DYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNN 199
DY II PMD+GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L
Sbjct: 1 DYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEK 60
Query: 200 LFDIKWKSLEEKWSSEVPKAGLGK-------ILSGKMMEVNDTRQNCPKTP 243
+F K + ++ +P A GK S +V CP TP
Sbjct: 61 IFLQKVAQMPQEEVELLPPAPKGKGRKPASGTQSAGSQQVAAVSSVCPATP 111
>gi|292614925|ref|XP_002662470.1| PREDICTED: bromodomain-containing protein 2 [Danio rerio]
Length = 979
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ K PK +T+ V++++L H W F +PVD V+L++PDY++II PMDL
Sbjct: 19 PEFKNPKKPGRLTNHLQYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDL 78
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
T++ RL+ N Y + E V D F+N +YN P +++ MAQ L LF
Sbjct: 79 TTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLF 128
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK + H A W F +PVD L + DY II +PMD+ T+K +++ Y+ +
Sbjct: 276 CNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYTDAL 335
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+F AD+RL FSN YNPP + V MA++L ++F+ ++ +
Sbjct: 336 QFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKI 376
>gi|115530796|emb|CAL49346.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
Length = 529
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V++KSL H W F +PVD VKL +PDY II +PMD+GT+K RL+ N Y + E + D
Sbjct: 85 VVMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKKRLENNYYWSALECMQD 144
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L +F
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQSLEKMF 173
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY+ II PMDL T+K ++D + +
Sbjct: 347 CNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKMDNREFKDAQ 406
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF A VRL FSN YNPP+++V MA++L ++F+ ++ + +
Sbjct: 407 EFAAAVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD 449
>gi|80971731|gb|ABB52829.1| BRD2 [Oncorhynchus mykiss]
Length = 812
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 64 SGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLM--MH 121
+GG K +A R P K+ + ++ +R K+ + + + C+ +LK L+ H
Sbjct: 310 AGGGKTLARRGGSGRPIKPP--KKDLPDSVQPKAPRRAKLSQQLRY-CNSVLKDLLSKKH 366
Query: 122 PA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
A W F +PVD L + DY II PMDL +K R+D Y S +F ADVRL FSN
Sbjct: 367 AAYAWPFYKPVDASALGLHDYHDIIKCPMDLSNIKRRMDSREYRDSQQFSADVRLMFSNC 426
Query: 181 MLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKM 229
YNPP+++V MA++L ++F+ ++ + ++ + P G + G M
Sbjct: 427 YKYNPPDHDVVGMARKLQDVFEFRFAKMPDEPLQQAPPKSRG--MGGSM 473
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 64/115 (55%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
++KSL H W F+ PVD +L++PDY II +PMD+GT+K RL+ N Y + E + D
Sbjct: 59 AMIKSLWRHHFAWPFHEPVDAFRLNLPDYHKIIKQPMDMGTIKKRLENNYYRSASECMQD 118
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSG 227
F+N +YN P +++ MAQ L +F K + ++ P A GK G
Sbjct: 119 FNTMFTNCYIYNKPTDDIVLMAQSLEKVFLQKVAQMPQEEIELPPPAPRGKPGKG 173
>gi|18157527|dbj|BAB83842.1| RING3 [Oryzias latipes]
Length = 814
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LKSL H W F+ PVD KL++PDY II PMD+GT++ RL+ N Y + E + D
Sbjct: 84 VVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIRKRLENNYYRSASECMQD 143
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPKAGLGKILSG 227
F+N +YN P +++ MAQ L F K + E + VP++ KI G
Sbjct: 144 FNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEEIELPPPVPRSKQSKISGG 201
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS +LK L+ H A W F +PVD V L + DY II PMDL T+K ++D Y +
Sbjct: 386 CSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGREYREAQ 445
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDI 203
+F ADVRL FSN YNPP+++V MA++L ++F+
Sbjct: 446 QFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEF 481
>gi|348536160|ref|XP_003455565.1| PREDICTED: bromodomain-containing protein 3 [Oreochromis niloticus]
Length = 678
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Query: 110 QCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C ILK ++ H A W F +PVD L++ DY II PMDL T++ ++D+ YS
Sbjct: 310 HCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGEYSDP 369
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL-EEKWSSEVP 217
F DVRL FSN YNPP++ V MA++L ++F++++ + +E + VP
Sbjct: 370 QSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKIPDEGLEASVP 421
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL + DY +I PMD+GT+K RL+ N Y + E +
Sbjct: 41 NVVVKTLWKHQFAWPFYQPVDAIKLCLHDYHKVIKNPMDMGTIKKRLENNYYWSASEAMQ 100
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ + +P A GK
Sbjct: 101 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVALLPPAPKGK 152
>gi|159507460|gb|ABW97743.1| bromodomain 4 [Xenopus laevis]
Length = 1366
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ RP + T+Q +LK+L H W F PVD VKL++PDY+ II PMD+
Sbjct: 47 PEIARPNQPKRQTNQLQYLLKTVLKTLWKHQFAWPFQVPVDVVKLNLPDYYKIIKTPMDM 106
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ + Y + E + D F+N +YN P +++ MA+ L LF
Sbjct: 107 GTIKKRLENHFYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 156
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F +PVD L + DY II PMDLGT+K +++ Y + +F +DVRL FSN Y
Sbjct: 390 AWPFYKPVDVETLGLHDYCEIIKHPMDLGTIKVKMENCDYKNAQDFASDVRLMFSNCYKY 449
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLEE 210
NPP++ V MA++L ++F++++ + +
Sbjct: 450 NPPDHEVVIMARKLQDVFEMRFAKMPD 476
>gi|395530391|ref|XP_003767279.1| PREDICTED: bromodomain testis-specific protein [Sarcophilus
harrisii]
Length = 840
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK + H A W F +PVD L + +Y+ ++ PMDLGT+K ++D Y +
Sbjct: 216 CNEILKEMFAKKHVAYAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMDNQEYKDAH 275
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
EF ADVRL F N YNPP++ V MA+ L ++F++++ + ++ +P
Sbjct: 276 EFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFEMQFAKIPDEPIERMP 325
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 140 DYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNN 199
DY+SII KPMDL T+K RL+ Y S E + D++ F+N LYN P +++ MAQ L
Sbjct: 3 DYYSIIKKPMDLSTIKKRLEHKYYVKSSECIEDLKTMFANCYLYNKPGDDIVLMAQALEK 62
Query: 200 LF 201
LF
Sbjct: 63 LF 64
>gi|297826963|ref|XP_002881364.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
gi|297327203|gb|EFH57623.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
Length = 386
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
+ Q + + + + H W F PVD L + DY+ +I KPMDLGT+K +++ + YS
Sbjct: 110 LMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNV 169
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
E ADVRL F NAM YN + +V+ MA+ L F+ KW
Sbjct: 170 REIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKW 208
>gi|148232443|ref|NP_001086546.1| bromodomain containing 4 [Xenopus laevis]
gi|49899749|gb|AAH76786.1| Brd4-prov protein [Xenopus laevis]
Length = 1362
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ RP + T+Q +LK+L H W F PVD VKL++PDY+ II PMD+
Sbjct: 47 PEIARPNQPKRQTNQLQYLLKTVLKTLWKHQFAWPFQVPVDVVKLNLPDYYKIIKTPMDM 106
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ + Y + E + D F+N +YN P +++ MA+ L LF
Sbjct: 107 GTIKKRLENHFYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 156
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F +PVD L + DY II PMDLGT+K +++ Y + +F +DVRL FSN Y
Sbjct: 390 AWPFYKPVDVETLGLHDYCEIIKHPMDLGTIKVKMENCDYKNAQDFASDVRLMFSNCYKY 449
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLEE 210
NPP++ V MA++L ++F++++ + +
Sbjct: 450 NPPDHEVVIMARKLQDVFEMRFAKMPD 476
>gi|431898968|gb|ELK07338.1| Bromodomain-containing protein 3 [Pteropus alecto]
Length = 756
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
K+ K+ + H C ILK ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 334 KKGKLSEHLRH-CESILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 392
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 393 KKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 445
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 30/147 (20%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIP--------------------------- 139
+ + +V++K+L H W F +PVD +KL++P
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPVSARPTPLLQLPGGAAPTLAEVLPEMW 98
Query: 140 ---DYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQE 196
DY II PMD+GT+K RL+ + Y + E + D F+N +YN P +++ MAQ
Sbjct: 99 LVRDYHKIIKNPMDMGTIKKRLENSYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQA 158
Query: 197 LNNLFDIKWKSLEEKWSSEVPKAGLGK 223
L +F K + ++ +P A GK
Sbjct: 159 LEKIFLQKVAQMPQEEVELLPPAPKGK 185
>gi|42571057|ref|NP_973602.1| Transcription factor GTE6 [Arabidopsis thaliana]
gi|330253942|gb|AEC09036.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 276
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
Q + + + + H W F PVD L + DY+ +I KPMDLGT+K +++ + YS E
Sbjct: 3 QFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREI 62
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
ADVRL F NAM YN + +V+ MA+ L F+ KW
Sbjct: 63 YADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKW 98
>gi|403363335|gb|EJY81411.1| Bromodomain containing protein [Oxytricha trifallax]
Length = 726
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++ S+ W+F+ PVDP +L +PDYF+II PMD GT+K RL+ N Y EF+ D+
Sbjct: 625 LMNSIWKFNQSWIFHEPVDPERLGVPDYFNIIRNPMDFGTIKQRLNTNYYHRMQEFLDDM 684
Query: 174 RLTFSNAMLYNPPENNVHKM 193
+L F N + +N ENN+ K+
Sbjct: 685 QLVFDNCLKFNGEENNIGKI 704
>gi|134105371|pdb|2OSS|A Chain A, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|308198555|pdb|3MXF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Jq1
gi|312208162|pdb|3P5O|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ibet Inhibitor
gi|340707484|pdb|2YEL|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|343197715|pdb|3SVF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Dihydro-Quinazolin Ligand
gi|343197716|pdb|3SVG|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-Dimethylisoxazol Ligand
gi|355333223|pdb|3ZYU|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|355333224|pdb|3ZYU|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|358009753|pdb|3U5J|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Alprazolam
gi|358009754|pdb|3U5K|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009755|pdb|3U5K|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009756|pdb|3U5K|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009757|pdb|3U5K|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009758|pdb|3U5L|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Benzo-Triazepine Ligand (Bzt-7)
gi|371927880|pdb|4A9L|A Chain A, N-Terminal Bromodomain Of Human Brd4 With 1,3-Dimethyl-6-(
Morpholine-4-Sulfonyl)-1,2,3,
4-Tetrahydroquinazolin-2-One
gi|372467090|pdb|3UVW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k5ack8ac)
gi|372467092|pdb|3UVY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k16ack20ac)
gi|374074443|pdb|3UVX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k12ack16ac)
gi|380259062|pdb|3UW9|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259063|pdb|3UW9|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259064|pdb|3UW9|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259065|pdb|3UW9|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|384482557|pdb|4E96|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Pfi-1
gi|404312911|pdb|4F3I|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ms417 Inhibitor
gi|409107327|pdb|4GPJ|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Isoxazolylbenzimidazole Ligand
gi|410563162|pdb|4HBV|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563164|pdb|4HBX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563165|pdb|4HBY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|449802776|pdb|4J0R|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
gi|449802777|pdb|4J0S|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
Length = 127
Score = 89.7 bits (221), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ P + T+Q V+LK+L H W F +PVD VKL++PDY+ II PMD+
Sbjct: 7 PETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDM 66
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MA+ L LF
Sbjct: 67 GTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 116
>gi|426023907|sp|F1QW93.2|BRDT_DANRE RecName: Full=Bromodomain testis-specific protein
Length = 918
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ K PK +T+ V++++L H W F +PVD V+L++PDY++II PMDL
Sbjct: 19 PEFKNPKKPGRLTNHLQYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDL 78
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
T++ RL+ N Y + E V D F+N +YN P +++ MAQ L LF
Sbjct: 79 TTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLF 128
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK + H A W F +PVD L + DY II +PMD+ T+K +++ Y+ +
Sbjct: 276 CNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYTDAL 335
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+F AD+RL FSN YNPP + V MA++L ++F+ ++ +
Sbjct: 336 QFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKI 376
>gi|165970446|gb|AAI58274.1| LOC100144959 protein [Xenopus (Silurana) tropicalis]
Length = 476
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD KL++PDY+ II PMDL T++ RL+ N YS + + + D
Sbjct: 39 VVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQD 98
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ M+QEL +F
Sbjct: 99 FNTMFTNCYIYNKPGDDIVVMSQELEKVF 127
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 110 QCSVILKSLMMHP---AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ IL +M W F + V P L D I PMDL T++ +++ LY +
Sbjct: 296 HCNNILNEMMSKKHAEYAWPFYKTVIPTSLL--DCSDAIKHPMDLATIRDKMENGLYKDT 353
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+F +D+RL F N+ YNPP+N V MA+++ ++F+
Sbjct: 354 QDFASDIRLMFMNSYKYNPPDNEVVNMARKMQDVFE 389
>gi|357517357|ref|XP_003628967.1| Global transcription factor group [Medicago truncatula]
gi|355522989|gb|AET03443.1| Global transcription factor group [Medicago truncatula]
Length = 365
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 16/174 (9%)
Query: 35 QQQSHVENWRHSSSVAESNQLMMSKPYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIE 94
+Q VE++ SS + + N S GG + E +E++ L K Q+ +
Sbjct: 34 KQVIEVEHYYESSGIFQGNS--------SRGGS--VVKEKGREKT--LAGTKTPLQDALR 81
Query: 95 GPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTV 154
+M + Q S IL+ + H W F PVD L + DY+ II KPMD GT+
Sbjct: 82 TETAAGKRMQE-LMRQFSTILRQITQHKWAWPFLEPVDVEGLGLHDYYEIIDKPMDFGTI 140
Query: 155 KTRL---DRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
K ++ D Y E ADVRL F NAM YN +++VH MA+ L F+ KW
Sbjct: 141 KNKMEAKDGTGYKNVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLMEKFEDKW 194
>gi|403415508|emb|CCM02208.1| predicted protein [Fibroporia radiculosa]
Length = 771
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 70/129 (54%), Gaps = 15/129 (11%)
Query: 97 KDKRPK---MDRGVTHQCSVILKSL-------MMHPAGWVFNRPVDPVKLDIPDYFSIIS 146
K K PK D+ + H C +LK L + HP F PVD VKL+IP Y ++
Sbjct: 415 KTKLPKNDMYDQQLKH-CEKVLKDLHKKSLYGIAHP----FYEPVDWVKLEIPQYPKVVK 469
Query: 147 KPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
+PMDL T+K +L YS D+F D +L N +NPP+N VH+ +EL+ LFD KW+
Sbjct: 470 RPMDLSTIKRKLTDGEYSTPDKFRDDFKLMIRNCFAFNPPKNPVHEAGKELDRLFDDKWR 529
Query: 207 SLEEKWSSE 215
L S E
Sbjct: 530 ELPPLRSQE 538
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 12/110 (10%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL--------DRN- 161
C+ +++L F PVDPV L++P Y SI+ PMD TV+ ++ D N
Sbjct: 232 CTSTIRTLKKIKDAGPFLHPVDPVALNVPHYPSIVKHPMDFSTVERKMTSCNPSKPDPNP 291
Query: 162 ---LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y+ DEF+ADVRL F+N L+N P++ + M + + +FD + K L
Sbjct: 292 ANPRYNNVDEFIADVRLIFTNCALFNGPDHPITAMGRRVEAVFDKQIKQL 341
>gi|410563163|pdb|4HBW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazoline Ligand
Length = 127
Score = 89.4 bits (220), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ P + T+Q V+LK+L H W F +PVD VKL++PDY+ II PMD+
Sbjct: 7 PETSNPNKPKRETNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDM 66
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +++ MA+ L LF
Sbjct: 67 GTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 116
>gi|189241564|ref|XP_967957.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 1321
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H + W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 367 CNEILKELFSKKHSSYAWPFYKPVDAELLMLHDYHDIIKKPMDLGTVKQKMDNREYRSAQ 426
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF ADVRL F+N YNP +++V MA++L ++F++K+ + +
Sbjct: 427 EFAADVRLIFTNCYKYNPSDHDVVAMARKLQDVFEVKFAKIPD 469
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
+LK++ H W F +PVD KL++PDY II +PMDLGT+K RLD N Y E + D
Sbjct: 45 TVLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRLDNNYYWSGKECIQD 104
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +V MAQ L +F
Sbjct: 105 FNTMFTNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|432910838|ref|XP_004078550.1| PREDICTED: bromodomain-containing protein 2-like [Oryzias latipes]
Length = 830
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 100 RP-KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL 158
RP +M + + ++K L H W F+ PVD +L +PDY+ II +PMD+GT+K RL
Sbjct: 81 RPGRMTNQLQYLQKTLMKCLWRHEFAWPFHEPVDAYRLKLPDYYKIIKQPMDMGTIKKRL 140
Query: 159 DRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+ + Y + E + D F+N +YN P++++ MAQ L +F
Sbjct: 141 ENSFYRSASECIQDFNTMFTNCYIYNKPKDDIVLMAQSLEKIF 183
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS +LK ++ H A W F PVD L + DY II PMDL T+K ++D Y +
Sbjct: 389 CSGLLKDMLSKKHAAYAWPFYTPVDAAALGLHDYHDIIKCPMDLSTIKRKMDCREYRDAQ 448
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
+F +DVRL FSN YNPP+++V MA++L ++F+ + + +
Sbjct: 449 QFASDVRLMFSNCYKYNPPDHDVVGMARKLQDVFEFSFAKMPD 491
>gi|297597282|ref|NP_001043715.2| Os01g0648700 [Oryza sativa Japonica Group]
gi|55296880|dbj|BAD68333.1| PSTVd RNA-biding protein-like [Oryza sativa Japonica Group]
gi|255673505|dbj|BAF05629.2| Os01g0648700 [Oryza sativa Japonica Group]
Length = 238
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 63/99 (63%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C +L L+ H GWVF PVD L + DY+ IS PMDLGTV+ RL+R Y+ F
Sbjct: 55 RCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRRYADPWAF 114
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
ADVRLTF+NAM YN + V++ A EL+ +F+ W S+
Sbjct: 115 AADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGWPSV 153
>gi|270001347|gb|EEZ97794.1| hypothetical protein TcasGA2_TC030708 [Tribolium castaneum]
Length = 815
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H + W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 360 CNEILKELFSKKHSSYAWPFYKPVDAELLMLHDYHDIIKKPMDLGTVKQKMDNREYRSAQ 419
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF ADVRL F+N YNP +++V MA++L ++F++K+ + +
Sbjct: 420 EFAADVRLIFTNCYKYNPSDHDVVAMARKLQDVFEVKFAKIPD 462
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
+LK++ H W F +PVD KL++PDY II +PMDLGT+K RLD N Y E + D
Sbjct: 45 TVLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRLDNNYYWSGKECIQD 104
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +V MAQ L +F
Sbjct: 105 FNTMFTNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|356558209|ref|XP_003547400.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 349
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
V HQ S+I + W F PVD L + DY+ II KPMD GT+K ++ D + Y
Sbjct: 90 VMHQFSIIFHQITHQRWAWPFMEPVDVEGLGLHDYYQIIEKPMDFGTIKRKMNAKDGSGY 149
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
E +DVRL F NAM YN +N+VH MA+ L F+ KW L
Sbjct: 150 KNVREIYSDVRLVFENAMKYNGEKNDVHIMAKTLLEKFEKKWLQL 194
>gi|168062324|ref|XP_001783131.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665381|gb|EDQ52068.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLYSVS 166
Q IL+ + H W F +PVD L + DY+ +I KPMDLGT+K ++ D + Y
Sbjct: 3 QVLSILRQISSHKWAWPFMKPVDVKGLGLHDYYEVIEKPMDLGTIKNKMDAKDASGYQHV 62
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
E DVRL FSNAM YNP ++V+ M++ L+ F+ KWK+L E
Sbjct: 63 QEVYQDVRLVFSNAMKYNPEGSDVYVMSKTLSEKFEEKWKTLVE 106
>gi|195999880|ref|XP_002109808.1| hypothetical protein TRIADDRAFT_20501 [Trichoplax adhaerens]
gi|190587932|gb|EDV27974.1| hypothetical protein TRIADDRAFT_20501, partial [Trichoplax
adhaerens]
Length = 470
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 114 ILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
+LK LM+ H A W F PV+ KL + DY+ II PMDLGTVK + ++ Y +EF
Sbjct: 158 VLKELMLKKHRAYAWPFYEPVNAEKLGLTDYYEIIKHPMDLGTVKDKFEKLEYKAINEFA 217
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
ADVRL F+N YNP ++++ MA+ L ++F+ K+ +
Sbjct: 218 ADVRLIFTNCYKYNPSDHDIVNMARRLQDVFEFKYAQI 255
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++ L H W F +PVDPVKL +PDYF II KPMDLGT+K +L+ +Y + E + D+
Sbjct: 13 VIDGLWKHRYAWPFRQPVDPVKLQLPDYFKIIKKPMDLGTIKRKLEGKMYHSAKECMDDI 72
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLF 201
TF+N YN +++ M +EL ++
Sbjct: 73 LRTFTNCYTYNKTSDDIVLMCEELEKVY 100
>gi|120577456|gb|AAI30180.1| Brd2-a protein [Xenopus laevis]
Length = 518
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDY 141
LP A E I K R H+ ++KSL H W F +PVD VKL +PDY
Sbjct: 36 LPQTNPPAPEFINPKKPGRSTNQLQYLHKA--VVKSLWKHQFSWPFRQPVDAVKLGLPDY 93
Query: 142 FSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
II +PMD+GTVK RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 94 HKIIKQPMDMGTVKKRLENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMF 153
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY+ II PMD+ T+K ++D + +
Sbjct: 327 CNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFKDAQ 386
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF A +RL FSN YNPP+++V MA++L ++F+ + + +
Sbjct: 387 EFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPD 429
>gi|54311476|gb|AAH84758.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 525
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDY 141
LP A E I K R H+ ++KSL H W F +PVD VKL +PDY
Sbjct: 36 LPQTNPPAPEFINPKKPGRSTNQLQYLHKA--VVKSLWKHQFSWPFRQPVDAVKLGLPDY 93
Query: 142 FSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
II +PMD+GTVK RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 94 HKIIKQPMDMGTVKKRLENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMF 153
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY+ II PMD+ T+K ++D + +
Sbjct: 327 CNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFKDAQ 386
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF A +RL FSN YNPP+++V MA++L ++F+ + + +
Sbjct: 387 EFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPD 429
>gi|405967643|gb|EKC32780.1| Bromodomain testis-specific protein [Crassostrea gigas]
Length = 1173
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
+LK++ H W F++PVD L++PDY+ II +PMDLGT+K RL+ N Y + E + D
Sbjct: 84 TVLKAVWRHQYAWPFHKPVDIKLLNLPDYYDIIKQPMDLGTIKERLETNFYYSATECIQD 143
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P+ ++ MAQ L LF
Sbjct: 144 FNQMFTNCYIYNNPKEDIVLMAQVLEKLF 172
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 57/87 (65%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F +PVD L + DY II KPMDLGT+K +++ Y + +F DVRL F+N Y
Sbjct: 367 AWPFYKPVDADVLGLHDYHDIIKKPMDLGTIKKKMESREYKTAAQFAEDVRLIFTNCYRY 426
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLEE 210
NP +++V MA++L ++F++K+ ++ E
Sbjct: 427 NPTDSDVVVMARKLQDVFEVKYATMPE 453
>gi|414880940|tpg|DAA58071.1| TPA: hypothetical protein ZEAMMB73_643963 [Zea mays]
Length = 1085
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 13/150 (8%)
Query: 454 KADPVKLQQEKERLEQRQREEKARIEAQIKAAEAASR-------MKAEIELKKQREKERE 506
K DP KL+ E+E LE+ QREE+AR++A+ KAAE + +A E K+QRE +RE
Sbjct: 801 KKDPEKLRHEREELERVQREERARLQAEAKAAEDVRKRAEAAAADEAAAEAKRQRELDRE 860
Query: 507 AARVALQKMERTVEIEHNLEILKELEMLSGCCLSPHLLNGSEAQKRAFKEAHFKNPLERI 566
AAR ALQ+ME+TV+I + LK+LEML G + N F+ N LE++
Sbjct: 861 AARKALQEMEKTVDINEGIHFLKDLEML-GSVTGEQIPNLVGETSPGFQMG--SNTLEKL 917
Query: 567 GLFMKSDYLVEDEDEEILNLD-GDGEEGEI 595
GL++K+D +DED + + D EEGEI
Sbjct: 918 GLYVKNDE--DDEDGDFTDEPVADVEEGEI 945
>gi|161611729|gb|AAI55902.1| Brd2-a protein [Xenopus laevis]
Length = 517
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDY 141
LP A E I K R H+ ++KSL H W F +PVD VKL +PDY
Sbjct: 36 LPQTNPPAPEFINPKKPGRSTNQLQYLHKA--VVKSLWKHQFSWPFRQPVDAVKLGLPDY 93
Query: 142 FSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
II +PMD+GTVK RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 94 HKIIKQPMDMGTVKKRLENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMF 153
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY+ II PMD+ T+K ++D + +
Sbjct: 327 CNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFKDAQ 386
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF A +RL FSN YNPP+++V MA++L ++F+ + + +
Sbjct: 387 EFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPD 429
>gi|300121324|emb|CBK21704.2| unnamed protein product [Blastocystis hominis]
Length = 304
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 5/152 (3%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C+ LK LMMH F PVDPV L + DYF ++ PMD T+ ++++ + DEF
Sbjct: 4 CAKSLKKLMMHKWAGPFLHPVDPVALGLSDYFDVVKHPMDFSTILSQIENHELRSKDEFA 63
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMM 230
+ V L F NA+LYN ++VH MA EL +LF + +++ + ++ AG +
Sbjct: 64 SKVNLVFDNALLYNSKGSDVHIMASELQSLFAKEMETI----TGQIFAAGPDAQAPTYYV 119
Query: 231 EVNDTRQNCPKTPP-LHSTLSSKKSKMSEEKA 261
R P PP L S+ +K S EKA
Sbjct: 120 PSRRERAPLPDIPPKLPRVSESRPAKSSAEKA 151
>gi|222618950|gb|EEE55082.1| hypothetical protein OsJ_02819 [Oryza sativa Japonica Group]
Length = 264
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 63/99 (63%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C +L L+ H GWVF PVD L + DY+ IS PMDLGTV+ RL+R Y+ F
Sbjct: 55 RCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRRYADPWAF 114
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
ADVRLTF+NAM YN + V++ A EL+ +F+ W S+
Sbjct: 115 AADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGWPSV 153
>gi|76780317|gb|AAI06310.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 517
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDY 141
LP A E I K R H+ ++KSL H W F +PVD VKL +PDY
Sbjct: 36 LPQTNPPAPEFINPKKPGRSTNQLQYLHKA--VVKSLWKHQFSWPFRQPVDAVKLGLPDY 93
Query: 142 FSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
II +PMD+GTVK RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 94 HKIIKQPMDMGTVKKRLENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMF 153
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY+ II PMD+ T+K ++D + +
Sbjct: 327 CNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFKDAQ 386
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF A +RL FSN YNPP+++V MA++L ++F+ + + +
Sbjct: 387 EFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPD 429
>gi|213406251|ref|XP_002173897.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001944|gb|EEB07604.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 726
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +LK L + F +PVDPV PDYF +I PMDLGT++ +L+ N Y+
Sbjct: 398 CQAVLKELFKKQHETYAYPFYQPVDPVAFGCPDYFKVIKHPMDLGTMQNKLNHNEYANIK 457
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+F ADV L F N +NPP V+ M ++L +F KW
Sbjct: 458 DFEADVNLVFKNCYRFNPPGTPVYLMGKKLETVFRSKW 495
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%)
Query: 100 RPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLD 159
RP + + +L+ L F PVDPVK +IPDY II PMDL T++ +L
Sbjct: 234 RPPLTKEQHKYIQAMLRQLRRCRDSIPFRVPVDPVKQNIPDYPLIIKHPMDLSTMQRKLT 293
Query: 160 RNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
Y + F+ D+ L F N LYN E+ V M + L F + K L +
Sbjct: 294 NREYDSAQSFIDDMNLMFDNCFLYNGTESPVGVMGKNLQATFTKQLKQLPSSY 346
>gi|120431733|ref|NP_001073342.1| bromodomain testis-specific protein isoform B [Mus musculus]
Length = 326
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN +++ MAQ L LF
Sbjct: 97 FNTMFSNCYLYNKTGDDIVVMAQALEKLF 125
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 110 QCSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKT 156
CS ILK ++ P W F PVD L + +Y+ ++ PMDLGT+K
Sbjct: 274 HCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKV 323
>gi|50413693|ref|XP_457302.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
gi|49652967|emb|CAG85306.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
Length = 639
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 77/147 (52%), Gaps = 12/147 (8%)
Query: 64 SGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQ--CSVILKSLM-- 119
SG KK + H +R+ P +K E P D RP+ + C+ +K L+
Sbjct: 275 SGDKKNSVAAHRPKRTIHPPKSK-------ELPYDVRPRKKKYAAELRFCNQTVKELISK 327
Query: 120 -MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFS 178
+ + F PVD V L+IP+Y ++ +PMDLGT++T+L N Y DEF DVRL F
Sbjct: 328 KHYNYNFPFLAPVDTVALNIPNYAEVVKEPMDLGTIQTKLANNQYENGDEFERDVRLVFK 387
Query: 179 NAMLYNPPENNVHKMAQELNNLFDIKW 205
N +NP +V+ M L ++FD KW
Sbjct: 388 NCYAFNPEGTDVNMMGHRLESIFDKKW 414
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVD VKL+IP Y++ I +PMDL T++ +++ N Y V D L +N +N
Sbjct: 169 FVHPVDIVKLNIPFYYNYIPRPMDLSTIERKINANAYEEPSRIVEDFNLMVANCCKFNGE 228
Query: 187 ENNVHKMAQELNNLFD 202
++ + KMA+ + F+
Sbjct: 229 QSGISKMAKNVQAHFE 244
>gi|384501114|gb|EIE91605.1| hypothetical protein RO3G_16316 [Rhizopus delemar RA 99-880]
Length = 227
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
+ F PVDPV L+IPDY SI+ P+DL T++T+L++N Y F AD++L F+N LY
Sbjct: 18 SFPFLYPVDPVALNIPDYPSIVKHPIDLSTIETKLNQNAYDSPHAFAADIKLMFNNCYLY 77
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPK 218
N PE ++ +A+EL +FD +W+ ++ K + VP+
Sbjct: 78 NAPELPIYDVAKELEAIFDRQWE-IKAKQPASVPR 111
>gi|62086391|dbj|BAD91553.1| bromodomain-containing protein [Mus musculus]
Length = 326
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 96
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
FSN LYN +++ MAQ L LF
Sbjct: 97 FNTMFSNCYLYNKTGDDIVVMAQALEKLF 125
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 110 QCSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKT 156
CS ILK ++ P W F PVD L + +Y+ ++ PMDLGT+K
Sbjct: 274 HCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKV 323
>gi|27696271|gb|AAH43784.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 539
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 82 LPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDY 141
LP A E I K R H+ ++KSL H W F +PVD VKL +PDY
Sbjct: 56 LPQTNPPAPEFINPKKPGRSTNQLQYLHKA--VVKSLWKHQFSWPFRQPVDAVKLGLPDY 113
Query: 142 FSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
II +PMD+GTVK RL+ N Y + E + D F+N +YN P +++ MAQ L +F
Sbjct: 114 HKIIKQPMDMGTVKKRLENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMF 173
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY+ II PMD+ T+K ++D + +
Sbjct: 347 CNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFKDAQ 406
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF A +RL FSN YNPP+++V MA++L ++F+ + + +
Sbjct: 407 EFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPD 449
>gi|432882591|ref|XP_004074106.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 823
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LKSL H W F+ PVD KL++PDY II PMD+GT++ RL+ N Y + E + D
Sbjct: 84 VVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIRKRLENNYYRSASECMQD 143
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L F
Sbjct: 144 FNAMFTNCYIYNKPTDDIVLMAQSLEKAF 172
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS +LK L+ H A W F +PVD V L + DY II PMDL T+K ++D Y +
Sbjct: 395 CSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGREYREAQ 454
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDI 203
+F ADVRL FSN YNPP+++V MA++L ++F+
Sbjct: 455 QFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEF 490
>gi|170284622|gb|AAI61214.1| Unknown (protein for IMAGE:8889270) [Xenopus (Silurana) tropicalis]
Length = 356
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD VKL++PDY II PMD+GT+K RL+ N Y ++E +
Sbjct: 40 NVVVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSANECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN +++ MAQ L +F K + ++ +P A GK
Sbjct: 100 DFNTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 151
>gi|449478032|ref|XP_002199360.2| PREDICTED: bromodomain-containing protein 3 [Taeniopygia guttata]
Length = 722
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 311 CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQDAQ 370
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 371 GFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N + S E +
Sbjct: 40 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYFWSSSECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D + +YN P +++ MAQ L +F
Sbjct: 100 DFNTVLQSCYIYNKPTDDIVLMAQALEKIF 129
>gi|167999165|ref|XP_001752288.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696683|gb|EDQ83021.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 260
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 121 HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN---LYSVSDEFVADVRLTF 177
H W F +PVD L + DY+ +I KPMDLGT+K +LD Y E DVRL F
Sbjct: 5 HKWAWPFMKPVDVKGLGLHDYYDVIEKPMDLGTIKNKLDVKDGLGYQHVQEVCDDVRLVF 64
Query: 178 SNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
SNAM YNP ++V+ M++ L++ F+ KWK+L E
Sbjct: 65 SNAMTYNPEGSDVYVMSKTLSDKFEEKWKTLIE 97
>gi|449269062|gb|EMC79871.1| Bromodomain-containing protein 3 [Columba livia]
Length = 724
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 313 CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQDAQ 372
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 373 GFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 413
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 40 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQ 99
Query: 172 DVRLTFSNAML--YNPPENNVHKMAQELNNLF 201
D F+N + + P +++ MAQ L +F
Sbjct: 100 DFNTMFTNCLYLSFLQPTDDIVLMAQALEKIF 131
>gi|432868098|ref|XP_004071410.1| PREDICTED: uncharacterized protein LOC101158947 [Oryzias latipes]
Length = 1443
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V++K+L H W F PVD +KL++PDY++II PMDLGT+K RL+ + Y + E + D
Sbjct: 48 VVVKALWKHHFSWPFQAPVDAIKLNLPDYYTIIHTPMDLGTIKKRLENSYYWNAQECIQD 107
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L +F
Sbjct: 108 FNTMFTNCYIYNKPGDDIVLMAEALEKVF 136
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ +++ ++ H A W F +PVD L + DY II PMDL T+K +L+ Y
Sbjct: 360 CAALVREMLSKKHAAYAWPFYKPVDVDALGLHDYHDIIKHPMDLSTIKAKLENRQYRDPQ 419
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL----EEKWSSEVPKAGL 221
EF ADVRL FSN YNPP++ V MA++L ++F++++ + E K VP L
Sbjct: 420 EFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPESKHVVSVPPPSL 477
>gi|345311855|ref|XP_001520339.2| PREDICTED: bromodomain testis-specific protein-like, partial
[Ornithorhynchus anatinus]
Length = 431
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V++K++ H W F +PVD VKL +PDY+ II PMDL T+K RL+ Y + E V D
Sbjct: 36 VVIKAIWKHSFSWPFQQPVDAVKLRLPDYYRIIKNPMDLSTIKKRLEYKYYVKASECVED 95
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N LYN P +++ MAQ L +F
Sbjct: 96 FNTMFTNCYLYNKPGDDIVLMAQALEKVF 124
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 110 QCSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ ILK L W F +PVD L + +Y+ ++ PMDLGT+K +++ Y +
Sbjct: 280 HCNEILKELFSKKHLSYAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMNNQNYKDA 339
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
EF ADVRL F N YNPP++ + MA+ L ++F++++ + ++ S VP
Sbjct: 340 HEFAADVRLMFMNCYKYNPPDHEIVGMARTLQDVFEMQFAKIPDEPSDSVP 390
>gi|410903440|ref|XP_003965201.1| PREDICTED: bromodomain-containing protein 2-like [Takifugu
rubripes]
Length = 546
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
Query: 93 IEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLG 152
+E P DK + + + ++++KSL H W F PVD V L + DY II+ PMDLG
Sbjct: 19 VENP-DKPGRRTNQLQYMQNIVVKSLWRHHYAWPFYEPVDAVGLGLADYHKIITSPMDLG 77
Query: 153 TVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
T+K RL+ N Y + E + D F+N +YN P +++ MA L +F K + ++
Sbjct: 78 TIKKRLENNYYWTASECLQDFNTMFTNCYIYNKPTDDIVLMALTLEKIFLQKVAQMPQEE 137
Query: 213 SSEVPKAGLGKILSGKMMEVND-TRQNCPKT--PPLHSTLSSKKSKMSEEKAA 262
+P GK G N+ + P T P + LS+ S E+AA
Sbjct: 138 VEVLPYVAKGKGKKGNASGKNNASVTTAPSTLSSPPRAGLSTTTSSADGEQAA 190
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 101 PKMDRGVTHQ---CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTV 154
PK + G++ + C+VILK ++ H A W F PVD V L + DY II PMDL TV
Sbjct: 236 PKPEHGLSERLKFCNVILKEMLSKKHAAYAWPFYEPVDAVALQLNDYHDIIKHPMDLSTV 295
Query: 155 KTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL--EEKW 212
K +LDR Y +D F ADV+L FSN YNP V A++L +F+ + + E
Sbjct: 296 KRKLDRGEYPNADSFAADVQLIFSNCYKYNPSHLEVVAHAKKLQGVFEKSFAKIPDEPTG 355
Query: 213 SSEVPKAGLGK 223
+ + A GK
Sbjct: 356 TGQAQTAAFGK 366
>gi|384499194|gb|EIE89685.1| hypothetical protein RO3G_14396 [Rhizopus delemar RA 99-880]
Length = 446
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 86 KRQAQE-VIEGPKDKR-PKMDRGVTHQCSVILKSLM---MHPAGWVFNRPVDPVKLDIPD 140
KR+AQ E P+ KR P+ + C+ LK L + F PVD V L+IPD
Sbjct: 151 KRKAQAPTKEYPEIKRNPRKNDAQLKFCAQALKELKKSKYRDINYPFLHPVDVVALNIPD 210
Query: 141 YFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNL 200
Y II PMDL T++ +L+ Y +F D++L F+N LYNPP +HKM ++L +
Sbjct: 211 YVDIIKHPMDLSTIEKKLNDGEYVEPKDFEEDIKLMFNNCYLYNPPSLPIHKMGRQLEKV 270
Query: 201 FDIKW 205
FD KW
Sbjct: 271 FDEKW 275
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%)
Query: 103 MDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
M R C I+++L H F +PVD ++L+IPDY II PMDL TV +L+
Sbjct: 1 MTRDQIKYCGAIMRNLKKHRDATPFLQPVDYIQLNIPDYPKIIHHPMDLATVDKKLNSGQ 60
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
YS D+++ DVRL F+N +N PE + + Q + + F+ + + +SE
Sbjct: 61 YSSVDQWICDVRLVFNNCFKFNGPEATISMLCQNVESAFEKSLRQMPPSKTSE 113
>gi|330812863|ref|XP_003291336.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
gi|325078478|gb|EGC32127.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
Length = 564
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 57/101 (56%)
Query: 102 KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
+M+ + C IL + + F RPVDP +IPDYF II PMD+ T+ ++LD
Sbjct: 321 QMNEKNRNLCKTILSQIFKKKISYAFQRPVDPELENIPDYFDIIKNPMDISTIDSKLDNE 380
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
Y +F ADVRL F NA+ YN + V+K A++L FD
Sbjct: 381 KYGTIKDFAADVRLMFENALTYNAEISPVYKYAKQLLTYFD 421
>gi|299116970|emb|CBN75074.1| hypothetical protein Esi_0066_0081 [Ectocarpus siliculosus]
Length = 1147
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 10/112 (8%)
Query: 106 GVTH------QCSVILKSL--MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTR 157
G TH +C +L +L + + W FN PVD V L++P+Y +II +PMDLGTVK++
Sbjct: 690 GTTHLTHGLRRCVTVLNNLRAIRGKSEW-FNEPVDYVGLNLPEYTTIIKRPMDLGTVKSK 748
Query: 158 LDRNLYSVSDEFVADVRLTFSNAMLYNPPE-NNVHKMAQELNNLFDIKWKSL 208
L+ Y + EF +VRL FSNA YN E ++VH A+ L ++FD K + L
Sbjct: 749 LESGEYKNTVEFAHEVRLVFSNACHYNSDETSDVHIAARHLLHVFDAKMEEL 800
>gi|63100516|gb|AAH95028.1| Wu:fi25h02 protein, partial [Danio rerio]
Length = 600
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 96 PKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P+ K PK +T+ V++++L H W F +PVD V+L++PDY++II PMDL
Sbjct: 19 PEFKNPKKPGRLTNHLQYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDL 78
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
T++ RL+ N Y + E V D F+N +YN P +++ MAQ L LF
Sbjct: 79 TTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLF 128
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK + H A W F +PVD L + DY II +PMD+ T+K +++ Y+ +
Sbjct: 276 CNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYTDAL 335
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+F AD+RL FSN YNPP + V MA++L ++F+ ++ +
Sbjct: 336 QFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKI 376
>gi|185177636|pdb|2YW5|A Chain A, Solution Structure Of The Bromodomain From Human
Bromodomain Containing Protein 3
Length = 138
Score = 88.2 bits (217), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 27 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 86
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ +P A GK
Sbjct: 87 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 138
>gi|397564010|gb|EJK44024.1| hypothetical protein THAOC_37475, partial [Thalassiosira oceanica]
Length = 517
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 114 ILKSLMMHP-AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
I+ L+ P A +F +PVDPV+L +P YF + KPMDLGT+ +L R +Y +F +D
Sbjct: 3 IVNFLLEQPIAAELFGKPVDPVELKLPTYFDDVKKPMDLGTISKKLTRGIYQSIGDFESD 62
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+ LTF NA+L+N ++ V K+AQ L N F+ K+K +
Sbjct: 63 MHLTFDNAILFNGKDHFVSKLAQNLKNTFEDKYKQM 98
>gi|410902639|ref|XP_003964801.1| PREDICTED: uncharacterized protein LOC101061335 [Takifugu rubripes]
Length = 1416
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 57/89 (64%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
++LK+L H W F PVD VKL++PDY++II PMD+GT+K RL+ + Y + E + D
Sbjct: 56 MVLKTLWKHQFAWPFQAPVDAVKLNLPDYYTIIKTPMDMGTIKKRLENSYYWNAQECIQD 115
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L +F
Sbjct: 116 FNTMFTNCYIYNKPGDDIVLMAEALEKVF 144
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F +PVD L + DY II PMDL T+K +L+ Y EF ADVRL FSN Y
Sbjct: 390 AWPFYKPVDADALGLHDYHDIIKHPMDLSTIKAKLENRQYREPQEFAADVRLMFSNCYKY 449
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLEEK 211
NPP++ V MA++L ++F++++ + ++
Sbjct: 450 NPPDHEVVAMARKLQDVFEMRFAKMPDE 477
>gi|323449321|gb|EGB05210.1| hypothetical protein AURANDRAFT_38626 [Aureococcus anophagefferens]
Length = 873
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 58/80 (72%)
Query: 129 RPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPEN 188
+PVDPV+L++PDYF II PMDLG++K R++ N Y EF +DVRLTF NA+ YN +
Sbjct: 2 QPVDPVELNLPDYFDIIKNPMDLGSIKKRMENNCYKSISEFGSDVRLTFDNAISYNGDGS 61
Query: 189 NVHKMAQELNNLFDIKWKSL 208
+V K+A+E+ +F+ + ++
Sbjct: 62 DVCKVAREMKAVFEKLYHAM 81
>gi|159164570|pdb|2G4A|A Chain A, Solution Structure Of A Bromodomain From Ring3 Protein
Length = 116
Score = 87.8 bits (216), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 110 QCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+VILK L+ H A W F +PVD L + DY II PMDL TVK +++ Y +
Sbjct: 5 HCNVILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDA 64
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF ADVRL FSN YNPP+++V MA++L ++F+ ++ + +
Sbjct: 65 QEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD 108
>gi|409051415|gb|EKM60891.1| hypothetical protein PHACADRAFT_247110 [Phanerochaete carnosa
HHB-10118-sp]
Length = 783
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Query: 93 IEGPKDKR-PKM--DRGVTHQ---CSVILKSL-------MMHPAGWVFNRPVDPVKLDIP 139
++ PK R PK+ D GVT Q C +L+ L + HP F PVD VKL+IP
Sbjct: 406 VDAPKKMRKPKVPRDSGVTEQLKFCDKVLRDLNKKTHWNIAHP----FYEPVDWVKLEIP 461
Query: 140 DYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNN 199
Y +I KPMDL T++ +LD + YS EF D +L N +NP V+ QEL
Sbjct: 462 SYPKLIKKPMDLSTMRRKLDNSEYSTPKEFNDDFKLIIRNCFTFNPAGTPVNTAGQELQQ 521
Query: 200 LFDIKWKSL 208
LFD KWK+L
Sbjct: 522 LFDEKWKNL 530
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 12/110 (10%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL--------DRN- 161
C +++L A F +PVD V L+IP Y I+ +PMD T++ +L D N
Sbjct: 233 CVSTIRTLKKMKAAAPFLKPVDVVALNIPHYPQIVKQPMDFSTIERKLQSSTPQKSDPNP 292
Query: 162 ---LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y +DEF+ADVRL FSN + +N ++ + ++++++ +FD + K+L
Sbjct: 293 SNPRYHHADEFIADVRLIFSNCLAFNGTDHFITQLSKQVEEVFDKQLKNL 342
>gi|19171509|emb|CAC84085.1| hypothetical protein [Takifugu rubripes]
Length = 701
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL + DY +I PMD+GT+K RL+ N Y + E +
Sbjct: 41 NVVVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRLENNYYWSASEAMQ 100
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MAQ L +F K + ++ + +P A GK
Sbjct: 101 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVALLPPAPKGK 152
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 11/115 (9%)
Query: 110 QCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C ILK ++ H A W F +PVD L++ DY II PMDL T++ ++D+ Y+
Sbjct: 299 HCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGEYNEP 358
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGL 221
F DVRL FSN YNPP++ V MA++L ++F++++ +++P GL
Sbjct: 359 QSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF--------AKIPDEGL 405
>gi|388580227|gb|EIM20543.1| hypothetical protein WALSEDRAFT_60853 [Wallemia sebi CBS 633.66]
Length = 1762
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMMH-PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTV 154
P+ +R M C I K + H AGW F PVDPV+ PDYF+II +PMD+GT+
Sbjct: 1218 PQAQRGGMSSQDVSACRAIHKRIQGHKTAGW-FLYPVDPVRDGAPDYFTIIKEPMDIGTM 1276
Query: 155 KTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
+LD Y+ ++ D +L NA YN P + VHK A EL+ FD +W+
Sbjct: 1277 SAKLDSGHYASRFDYENDFKLIIKNATTYNGPSSPVHKTALELDAFFDKQWQ 1328
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 116 KSLMMHPAGWV-------FNRPVDPVKLDIPDYFSIISKP--MDLGTVKTRLDRNLYSVS 166
+SL+ GW F +PVDPV L IP Y II + DL ++++L+++ Y
Sbjct: 1626 RSLVSTMKGWYKSEHAFWFLQPVDPVALGIPHYNDIIPQENMRDLSLIQSKLEKDQYPSV 1685
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPK 218
D F AD++L NA+L+N P++ V A+ L + K + K++S P+
Sbjct: 1686 DAFEADIKLMTYNAILFNGPDSPVSISAKILEKMVANSLKEFKNKFNSLSPQ 1737
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+ ++L+ L P +F +PVDP+ P Y I +PMD T+ +D+ Y +DEF
Sbjct: 1514 KAKILLRKLTGMPEAAIFLQPVDPILHGCPTYLDEIKRPMDFSTISKNMDQKKYVTNDEF 1573
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNL---FDIKWKSL 208
+ DV F N +N AQ + + F +W+S+
Sbjct: 1574 INDVEQIFKNCRQFNGTSETSTLTAQTCDPVEKAFKREWRSI 1615
>gi|341903331|gb|EGT59266.1| CBN-BET-2 protein [Caenorhabditis brenneri]
Length = 1460
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 8/105 (7%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
VF PVDP+KL I DY +I PMDL T+K +LD Y +EFVAD+ L N YNP
Sbjct: 765 VFYLPVDPIKLKIFDYLDVIKTPMDLQTIKKKLDHKQYIDPEEFVADMNLMVDNCCKYNP 824
Query: 186 PENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMM 230
+ VH+ A +L LFD +WK P+ G+ KI+S +
Sbjct: 825 KGSAVHQNALDLKALFDERWKLF--------PRPGVSKIVSDSYI 861
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS-DEFVA 171
++K + H W F PVD KL+IP+Y ++I++PMDL T++ R+ RN+Y S + +
Sbjct: 439 TVIKDAVKHKHSWPFQFPVDANKLEIPEYHNMITRPMDLHTIEQRI-RNIYYWSAQDAIQ 497
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
D+ FSN +NPPE +V+KMA+ L + K L
Sbjct: 498 DINQLFSNCYKFNPPEYDVYKMAKTLERQIQTQLKDL 534
>gi|198456597|ref|XP_001360386.2| GA15830 [Drosophila pseudoobscura pseudoobscura]
gi|198135670|gb|EAL24961.2| GA15830 [Drosophila pseudoobscura pseudoobscura]
Length = 265
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C I++ L W+F P+D L + DY I+ KPMDL +++TRL LY +D
Sbjct: 25 CKAIIRKLFSSQYKKLAWIFYEPIDAPYLGLHDYHKIVKKPMDLNSIRTRLQAGLYVNAD 84
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
EFV DVRL F N LY P++ H+MA++L +F+
Sbjct: 85 EFVRDVRLMFDNTYLYTTPDHLCHQMAKKLQAIFE 119
>gi|68478269|ref|XP_716876.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
gi|68478390|ref|XP_716816.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438500|gb|EAK97830.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438562|gb|EAK97891.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
Length = 732
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 22/143 (15%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ +K LM + + F PVD V L+IP+Y I+ +PMDLGT++++L N Y +D
Sbjct: 392 CNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANNEYENAD 451
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK-------------------SL 208
+F DVRL F N L+NP +V+ M L +FD KW S
Sbjct: 452 DFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKWANKPVPEPTPQNSDVSDREYSS 511
Query: 209 EEKWSSEVPKAGLGKILSGKMME 231
EE+ + E+ +A L +I + ++ME
Sbjct: 512 EEEDNVEISEAMLSEIPAIQVME 534
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 109 HQCSVIL---KSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
HQ +L K++ + F PVD VKL++P Y++ I +PMDL T++ +++ Y
Sbjct: 213 HQAKFVLNTIKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYED 272
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+ V D L N +N + KMA + F+
Sbjct: 273 VSQVVDDFNLMVKNCKKFNGEAAGISKMATNIQAQFE 309
>gi|384493798|gb|EIE84289.1| hypothetical protein RO3G_08999 [Rhizopus delemar RA 99-880]
Length = 569
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 97 KDKRPKMDRGVTHQCSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGT 153
K + P+ + C+ LK L + F PVD V L+IPDY I+ PMDL T
Sbjct: 223 KRRNPRKNDAQMKFCAQALKELKKTKYRDINYPFLHPVDVVGLNIPDYVDIVKHPMDLST 282
Query: 154 VKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
++ +L+ Y+ ++F D+RL F+N LYNPP VHKM ++L FD KW
Sbjct: 283 IEKKLNDGEYAEPEDFENDIRLMFNNCYLYNPPSLPVHKMGRQLEKAFDDKW 334
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%)
Query: 103 MDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
M R C I+++L H F +PVD VKL+IPDY II PMDL TV +L+
Sbjct: 53 MTRDQIKYCGAIMRNLKKHRDAAPFLQPVDYVKLNIPDYPKIIRHPMDLATVDKKLNSGQ 112
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
Y D+++ DVRL F+N +N PE V + Q + + F+
Sbjct: 113 YDSVDQWIYDVRLVFNNCFKFNGPEAMVSMLCQNVESAFE 152
>gi|148235897|ref|NP_001090595.1| bromodomain containing 3 [Xenopus laevis]
gi|120537384|gb|AAI29055.1| LOC100036838 protein [Xenopus laevis]
Length = 783
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD VKL +PDY II PMD+GT+K RL+ N Y ++E +
Sbjct: 40 NVVVKTLWKHQFAWPFYQPVDCVKLSLPDYHKIIKNPMDMGTIKKRLESNYYWSANECMQ 99
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN +++ MAQ L +F K + ++ +P GK
Sbjct: 100 DFNTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGK 151
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK ++ H A W F +PVD L++ DY II PMDL +VK ++D Y+ +
Sbjct: 356 CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKNPMDLSSVKRKMDGREYADAQ 415
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 416 AFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 456
>gi|238882433|gb|EEQ46071.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 709
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 22/143 (15%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ +K LM + + F PVD V L+IP+Y I+ +PMDLGT++++L N Y +D
Sbjct: 369 CNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANNEYENAD 428
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK-------------------SL 208
+F DVRL F N L+NP +V+ M L +FD KW S
Sbjct: 429 DFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKWANKPVPEPTPQNSDVSDREYSS 488
Query: 209 EEKWSSEVPKAGLGKILSGKMME 231
EE+ + E+ +A L +I + ++ME
Sbjct: 489 EEEDNVEISEAMLSEIPAIQVME 511
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 109 HQCSVIL---KSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
HQ +L K++ + F PVD VKL++P Y++ I +PMDL T++ +++ Y
Sbjct: 190 HQAKFVLNTIKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYED 249
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+ V D L N +N + KMA + F+
Sbjct: 250 VSQVVDDFNLMVKNCKKFNGEAAGISKMATNIQAQFE 286
>gi|47209011|emb|CAF91369.1| unnamed protein product [Tetraodon nigroviridis]
Length = 530
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 62/112 (55%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++KSL H W F PVD V L + DY II+ PMDLGT+K RL+ N Y + E +
Sbjct: 38 NVVVKSLWRHHYAWPFYEPVDAVALGLSDYHKIITSPMDLGTIKKRLENNYYWTASECLQ 97
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D F+N +YN P +++ MA L +F K + ++ P+A GK
Sbjct: 98 DFNTMFTNCYIYNKPTDDIVLMALTLEKIFLQKVGQMPQEEVEVHPQAAKGK 149
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+V+LK ++ H A W F PVD L + DY II PMDL TVK ++D Y +D
Sbjct: 264 CNVLLKEMLSKKHAAYAWPFYEPVDAEALQLHDYHDIIKYPMDLSTVKRKMDGGEYPDAD 323
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSS--EVPKAGLGK 223
F ADVRL FSN YNP + V A++L +F+ + + ++ ++ + P A GK
Sbjct: 324 SFAADVRLIFSNCYRYNPAQLEVVAQAKKLQGVFEKSFAKIPDEPANPGQAPAAASGK 381
>gi|349577009|dbj|GAA22178.1| K7_Bdf2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 638
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 64 SGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHP- 122
SG ++ I+ + + +I P + ++ E K K + + C ILK LM
Sbjct: 282 SGNREGISG--GRPKRTIHPPKSKDLFDIYENSKPKSKTLQKKF-RTCLKILKVLMSKKN 338
Query: 123 --AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
+ F +PVDP+ L++P+YF ++ PMDLGT+ L Y D+FV D+ L F N
Sbjct: 339 SDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNLVFYNC 398
Query: 181 MLYNPPENNVHKMAQELNNLFDIKW 205
+NP N VH M ++L LF+ W
Sbjct: 399 FQFNPEGNEVHSMGKKLKELFNFHW 423
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDP+ L+IP YF+ + PMDL ++T+L N+Y ++ +D + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 187 ENNVHKMAQELNNLFDIKWKSL 208
E+++ MA+ + F+ K ++
Sbjct: 218 ESSISSMAKRIQKYFEKKLSAM 239
>gi|256274113|gb|EEU09024.1| Bdf2p [Saccharomyces cerevisiae JAY291]
Length = 638
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 64 SGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHP- 122
SG ++ I+ + + +I P + ++ E K K + + C ILK LM
Sbjct: 282 SGNREGISG--GRPKRTIHPPKSKDLFDIYENSKPKSKTLQKKF-RTCLKILKVLMSKKN 338
Query: 123 --AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
+ F +PVDP+ L++P+YF ++ PMDLGT+ L Y D+FV D+ L F N
Sbjct: 339 SDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNLVFYNC 398
Query: 181 MLYNPPENNVHKMAQELNNLFDIKW 205
+NP N VH M ++L LF+ W
Sbjct: 399 FQFNPEGNEVHSMGKKLKELFNFHW 423
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDP+ L+IP YF+ + PMDL ++T+L N+Y ++ +D + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 187 ENNVHKMAQELNNLFDIKWKSL 208
E+++ MA+ + F+ K ++
Sbjct: 218 ESSISSMAKRIQKYFEKKLSAM 239
>gi|444519215|gb|ELV12653.1| Guanine nucleotide exchange factor VAV2 [Tupaia chinensis]
Length = 1580
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
KR K+ + + C ILK ++ H A W F +PVD L++ DY II PMDL TVK
Sbjct: 257 KRGKLSEHLRY-CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 315
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
++D Y + F AD+RL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 316 RKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 368
>gi|194388908|dbj|BAG61471.1| unnamed protein product [Homo sapiens]
Length = 405
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F +PVD L++ DY II PMDL TVK ++D Y + F ADVRL FSN Y
Sbjct: 10 AWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKY 69
Query: 184 NPPENNVHKMAQELNNLFDIKWKSL 208
NPP++ V MA++L ++F++++ +
Sbjct: 70 NPPDHEVVAMARKLQDVFEMRFAKM 94
>gi|357166043|ref|XP_003580578.1| PREDICTED: transcription factor GTE7-like [Brachypodium distachyon]
Length = 458
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 97 KDKRP----KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLG 152
KD RP K+ + +C+ IL L FN PV+ +L + DY ++I PMDLG
Sbjct: 110 KDLRPPPPAKLRVAMRKRCAQILARLQKDKRSIWFNAPVEVERLGLHDYHAVIKSPMDLG 169
Query: 153 TVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
TV+ RL Y D F ADVRLTFSNA+ YNP ++VH A +L F+ +++
Sbjct: 170 TVRARLAAKAYPSHDAFAADVRLTFSNALRYNPAGHDVHIFAGDLLASFEKMYRA 224
>gi|440473196|gb|ELQ42011.1| hypothetical protein OOU_Y34scaffold00240g18 [Magnaporthe oryzae
Y34]
gi|440484338|gb|ELQ64424.1| hypothetical protein OOW_P131scaffold00625g16 [Magnaporthe oryzae
P131]
Length = 1000
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 111 CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK L H W+F +PVD + P Y+SII KPMDLGT+ +L Y +
Sbjct: 577 CDDILKDLAKPKSHGIAWIFAKPVDETRDGAPGYYSIIKKPMDLGTMTVKLQEGKYRSAA 636
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
+F AD L +N +NP +VH +A+ L F KW ++
Sbjct: 637 DFKADFDLMLNNCFTFNPAGTDVHALARNLEAYFQDKWAGID 678
>gi|406602290|emb|CCH46128.1| Bromodomain-containing factor 1 [Wickerhamomyces ciferrii]
Length = 683
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 96 PKDKRPKMDRGV-----THQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMD 150
P D RP+ + V + Q L S + F PVDPV L+ P YF +S+PMD
Sbjct: 347 PYDIRPRKKKFVPELRFSQQVLKELTSKKYESFNYPFLEPVDPVALNCPTYFDYVSEPMD 406
Query: 151 LGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
L TV+ +L+ N+Y +DEF D+RL F N +NP V+ M L +FD +W
Sbjct: 407 LSTVQNKLNNNIYENADEFERDIRLIFQNCYSFNPEGTAVNMMGHRLEAVFDKRW 461
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
P+ PK G ++ I+K M AG F PVD VKL IP Y++ I++PMDL T++
Sbjct: 179 PEKPLPKHQAGFANKTLKIIKR--MKDAGP-FLHPVDTVKLQIPLYYNFITRPMDLSTIE 235
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+L+ N Y+ EF+ D L N + +N E+ + +M++ + F+
Sbjct: 236 RKLNANAYAELQEFIDDFNLMVDNCVRFNGAESGIAQMSRNIQASFE 282
>gi|339245937|ref|XP_003374602.1| putative bromodomain protein [Trichinella spiralis]
gi|316972199|gb|EFV55887.1| putative bromodomain protein [Trichinella spiralis]
Length = 847
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C I+K L+ W F +PVD L + DY+ +I PMDLGTV+ +L+ Y
Sbjct: 373 CYGIVKELLSKRHSEYAWPFYKPVDVEGLGLHDYYDVIEVPMDLGTVRRKLECREYGSPS 432
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V KMA+ ++ +F+ ++ L
Sbjct: 433 EFAADVRLIFSNCYRYNPPDHEVVKMAKTISEIFEQRFAQL 473
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L++++ H W F++PVD KL++ DY II +PMDLGT++ RL Y S + + D
Sbjct: 109 VLRAVLRHKHSWPFSKPVDAAKLNLVDYHDIIKRPMDLGTIEKRLRNCYYYSSQQSMQDF 168
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N YNPP +++ MAQ L +F
Sbjct: 169 MTMFTNCYTYNPPGSDIVVMAQALEKVF 196
>gi|428171952|gb|EKX40865.1| hypothetical protein GUITHDRAFT_75230, partial [Guillardia theta
CCMP2712]
Length = 87
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/72 (55%), Positives = 51/72 (70%)
Query: 131 VDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNV 190
VDP+ LDIP YF II PMDLGTV+++L Y + F ADVRLTF NAML+NP + V
Sbjct: 1 VDPIALDIPTYFEIIKHPMDLGTVRSKLISGSYKDINAFAADVRLTFDNAMLFNPVGHWV 60
Query: 191 HKMAQELNNLFD 202
H+MA+ L + F+
Sbjct: 61 HEMAKNLKSFFE 72
>gi|254566451|ref|XP_002490336.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|238030132|emb|CAY68055.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|328350730|emb|CCA37130.1| Bromodomain-containing factor 1 [Komagataella pastoris CBS 7435]
Length = 640
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Query: 96 PKDKRPKMDRGVTHQ--CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMD 150
P D RP+ + V C+ ++K LM + F +PVDPV LD P YF I+ +PMD
Sbjct: 280 PYDIRPRKKKYVQELRFCNQVMKELMSKKHQNYSFPFLQPVDPVALDCPTYFDIVKEPMD 339
Query: 151 LGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
LGT++ +L + Y +D+F +VRL F+N +NP + V+ M + N+F+ +W+
Sbjct: 340 LGTIQAKLANSEYENADQFEREVRLVFTNCYKFNPEGSPVNVMGHTMENVFNKEWE 395
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVD KL IP Y++ I +PMDL T++ ++ + Y D V D L N +N
Sbjct: 152 FLLPVDTEKLGIPLYYNYIKRPMDLSTIERKISVSAYESPDIIVEDFNLMVDNCRKFNGE 211
Query: 187 ENNVHKMAQELNNLFD 202
+ + +MA+ + F+
Sbjct: 212 DTPITRMAKNIQASFE 227
>gi|160333520|ref|NP_001103994.1| bromodomain containing 2b [Danio rerio]
gi|157280795|gb|ABV29330.1| truncated bromodomain-containing protein 2b [Danio rerio]
Length = 276
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 56/89 (62%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V++K+L H W F+ PVD +L++PDY II +PMD+GT+K RL+ N Y + E + D
Sbjct: 81 VLVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRLENNYYRGASECLQD 140
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L +F
Sbjct: 141 FNTMFTNCYIYNKPADDIVLMAQSLEKVF 169
>gi|151941931|gb|EDN60287.1| bromodomain factor [Saccharomyces cerevisiae YJM789]
Length = 638
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 64 SGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHP- 122
SG ++ I+ + + +I P + ++ E K K + + C ILK LM
Sbjct: 282 SGNREGISG--GRPKRTIHPPKSKDLFDIYENSKPKSKTLQKKF-RTCLKILKVLMSKKN 338
Query: 123 --AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNA 180
+ F +PVDP+ L++P+YF ++ PMDLGT+ L Y D+FV D+ L F N
Sbjct: 339 SDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNLVFYNC 398
Query: 181 MLYNPPENNVHKMAQELNNLFDIKW 205
+NP N VH M + L LF+ W
Sbjct: 399 FQFNPEGNEVHSMGKNLKELFNFHW 423
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDP+ L+IP YF+ + PMDL ++T+L N+Y ++ +D + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 187 ENNVHKMAQELNNLFDIKWKSL 208
E+++ MA+ + F+ K ++
Sbjct: 218 ESSISSMAKRIQKYFEKKLSAM 239
>gi|308198663|pdb|3ONI|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd2
In Complex With The Inhibitor Jq1
Length = 114
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 110 QCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ ILK L+ H A W F +PVD L + DY II PMDL TVK +++ Y +
Sbjct: 11 HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDA 70
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP+++V MA++L ++F+ ++ +
Sbjct: 71 QEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 112
>gi|162135989|ref|NP_001085290.1| uncharacterized protein LOC443648 [Xenopus laevis]
gi|115313740|gb|AAI23909.1| LOC443648 protein [Xenopus laevis]
gi|159507463|gb|ABW97744.1| bromodomain 4 [Xenopus laevis]
Length = 1351
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 94 EGPKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPM 149
+ P+ RP + T+Q +LK+L H W F PVD VKL++PDY II PM
Sbjct: 46 DPPEITRPNQPKRQTNQLQYLLKAVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPM 105
Query: 150 DLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D+GT+K RL+ + Y + E + D F+N +YN P +++ MA+ L LF
Sbjct: 106 DMGTIKKRLENHYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ I++ + H A W F +PVD L + DY II PMDLGT+K +++ Y +
Sbjct: 375 CASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRDYKEAQ 434
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPKAGLG 222
EF +DVRL FSN YNPP++ V MA++L ++F++++ + E+ + VP G
Sbjct: 435 EFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKMPDEPEEAPAPVPSLAPG 492
>gi|325296799|ref|NP_001191640.1| CREB-binding protein [Aplysia californica]
gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia californica]
Length = 2245
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 56/87 (64%)
Query: 122 PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAM 181
P F +PVDPV L IPDYF I+ KPMDL T++ +LD LYS E+V DV L F NA
Sbjct: 1003 PESLPFRQPVDPVVLHIPDYFDIVKKPMDLSTIRRKLDSGLYSDPWEYVDDVCLMFDNAW 1062
Query: 182 LYNPPENNVHKMAQELNNLFDIKWKSL 208
LYN + V+K A +L+ +F+ + S+
Sbjct: 1063 LYNRKTSRVYKYASKLSEVFESEIDSV 1089
>gi|207346961|gb|EDZ73294.1| YDL070Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 614
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMMHP---AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK LM + F +PVDP+ L++P+YF ++ PMDLGT+ L Y D
Sbjct: 326 CLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTID 385
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+FV D+ L F N +NP N VH M ++L LF+ W
Sbjct: 386 QFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHW 423
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDP+ L+IP YF+ + PMDL ++T+L N+Y ++ +D + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 187 ENNVHKMAQELNNLFDIKWKSL 208
E+++ MA+ + F+ K ++
Sbjct: 218 ESSISSMAKRIQKYFEKKLSAM 239
>gi|389632607|ref|XP_003713956.1| hypothetical protein MGG_08925 [Magnaporthe oryzae 70-15]
gi|351646289|gb|EHA54149.1| hypothetical protein MGG_08925 [Magnaporthe oryzae 70-15]
Length = 1021
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 111 CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK L H W+F +PVD + P Y+SII KPMDLGT+ +L Y +
Sbjct: 598 CDDILKDLAKPKSHGIAWIFAKPVDETRDGAPGYYSIIKKPMDLGTMTVKLQEGKYRSAA 657
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
+F AD L +N +NP +VH +A+ L F KW ++
Sbjct: 658 DFKADFDLMLNNCFTFNPAGTDVHALARNLEAYFQDKWAGID 699
>gi|213983065|ref|NP_001135690.1| bromodomain containing 4 [Xenopus (Silurana) tropicalis]
gi|197245689|gb|AAI68637.1| Unknown (protein for MGC:186343) [Xenopus (Silurana) tropicalis]
Length = 1364
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
+LK+L H W F PVD VKL++PDY II PMD+GT+K RL+ + Y + E + D
Sbjct: 71 TVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKNPMDMGTIKKRLENHYYWNAQECIQD 130
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MA+ L LF
Sbjct: 131 FNTMFTNCYIYNKPGDDIVLMAEALEKLF 159
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ I++ + H A W F +PVD L + DY II PMDLGT+K ++D Y +
Sbjct: 382 CAGIIREMFSKKHQAYAWPFYKPVDVDALGLHDYREIIKHPMDLGTIKVKMDNWDYKDAK 441
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF +DVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 442 EFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRYAKM 482
>gi|49118460|gb|AAH73443.1| LOC443648 protein, partial [Xenopus laevis]
Length = 559
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 94 EGPKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPM 149
+ P+ RP + T+Q +LK+L H W F PVD VKL++PDY II PM
Sbjct: 46 DPPEITRPNQPKRQTNQLQYLLKAVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPM 105
Query: 150 DLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D+GT+K RL+ + Y + E + D F+N +YN P +++ MA+ L LF
Sbjct: 106 DMGTIKKRLENHYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ I++ + H A W F +PVD L + DY II PMDLGT+K +++ Y +
Sbjct: 375 CASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRDYKEAQ 434
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPKAGLG 222
EF +DVRL FSN YNPP++ V MA++L ++F++++ + E+ + VP G
Sbjct: 435 EFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKMPDEPEEAPAPVPSLAPG 492
>gi|195167198|ref|XP_002024421.1| GL14811 [Drosophila persimilis]
gi|194107794|gb|EDW29837.1| GL14811 [Drosophila persimilis]
Length = 678
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 108 THQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
T+Q ++K++M H W F +PVD KL++PDY II +PMD+GT+K RL+ N Y
Sbjct: 36 TNQLQFLIKTVMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYY 95
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+ E + D F+N +YN P +V MAQ L +F
Sbjct: 96 WSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|190405078|gb|EDV08345.1| hypothetical protein SCRG_00567 [Saccharomyces cerevisiae RM11-1a]
Length = 643
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMMHP---AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK LM + F +PVDP+ L++P+YF ++ PMDLGT+ L Y D
Sbjct: 331 CLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTID 390
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+FV D+ L F N +NP N VH M ++L LF+ W
Sbjct: 391 QFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHW 428
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDP+ L+IP YF+ + PMDL ++T+L N+Y ++ +D + N + +N P
Sbjct: 163 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 222
Query: 187 ENNVHKMAQELNNLFDIKWKSL 208
E+++ MA+ + F+ K ++
Sbjct: 223 ESSISSMAKRIQKYFEKKLSAM 244
>gi|6320132|ref|NP_010213.1| Bdf2p [Saccharomyces cerevisiae S288c]
gi|74583636|sp|Q07442.1|BDF2_YEAST RecName: Full=Bromodomain-containing factor 2
gi|1431082|emb|CAA98636.1| BDF2 [Saccharomyces cerevisiae]
gi|285810964|tpg|DAA11788.1| TPA: Bdf2p [Saccharomyces cerevisiae S288c]
gi|392300048|gb|EIW11139.1| Bdf2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 638
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMMHP---AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK LM + F +PVDP+ L++P+YF ++ PMDLGT+ L Y D
Sbjct: 326 CLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTID 385
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+FV D+ L F N +NP N VH M ++L LF+ W
Sbjct: 386 QFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHW 423
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDP+ L+IP YF+ + PMDL ++T+L N+Y ++ +D + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 187 ENNVHKMAQELNNLFDIKWKSL 208
E+++ MA+ + F+ K ++
Sbjct: 218 ESSISSMAKRIQKYFEKKLSAM 239
>gi|259145174|emb|CAY78438.1| Bdf2p [Saccharomyces cerevisiae EC1118]
Length = 638
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMMHP---AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK LM + F +PVDP+ L++P+YF ++ PMDLGT+ L Y D
Sbjct: 326 CLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTID 385
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+FV D+ L F N +NP N VH M ++L LF+ W
Sbjct: 386 QFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHW 423
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDP+ L+IP YF+ + PMDL ++T+L N+Y ++ +D + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 187 ENNVHKMAQELNNLFDIKWKSL 208
E+++ MA+ + F+ K ++
Sbjct: 218 ESSISSMAKRIQKYFEKKLSAM 239
>gi|241955217|ref|XP_002420329.1| bromodomain-containing transcription factor, putative; protein
involved in transcription initiation at TATA-containing
promoters, putative [Candida dubliniensis CD36]
gi|223643671|emb|CAX41404.1| bromodomain-containing transcription factor, putative [Candida
dubliniensis CD36]
Length = 721
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ +K LM + + F PVD V L+IP+Y I+ PMDLGT++++L N Y +D
Sbjct: 379 CNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIVKHPMDLGTIQSKLANNEYENAD 438
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
+F DVRL F N L+NP +V+ M L +FD KW S
Sbjct: 439 DFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKWAS 478
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 109 HQCSVIL---KSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
HQ +L K++ + F PVD VKL++P Y++ I +PMDL T++ +++ Y
Sbjct: 198 HQAKFVLNTIKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYEN 257
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+ V D L N +N + KMA + F+
Sbjct: 258 VSQVVDDFNLMVKNCKKFNGEAAGISKMAMNIQAQFE 294
>gi|312373442|gb|EFR21185.1| hypothetical protein AND_17423 [Anopheles darlingi]
Length = 401
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
P D+ ++ + ++K++ H W F +PVD KL++PDY II +PMDLGT+K
Sbjct: 58 PADRPGRLTNQIHFLLRTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIK 117
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIK 204
RL+ N Y + E + D F+N +YN P +V MAQ L LF K
Sbjct: 118 KRLENNYYWSAKECIKDFNTMFTNCYVYNKPGEDVVVMAQTLEKLFLTK 166
>gi|66912019|gb|AAH97528.1| LOC443648 protein, partial [Xenopus laevis]
Length = 572
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 94 EGPKDKRPKMDRGVTHQCS----VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPM 149
+ P+ RP + T+Q +LK+L H W F PVD VKL++PDY II PM
Sbjct: 46 DPPEITRPNQPKRQTNQLQYLLKAVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPM 105
Query: 150 DLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D+GT+K RL+ + Y + E + D F+N +YN P +++ MA+ L LF
Sbjct: 106 DMGTIKKRLENHYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ I++ + H A W F +PVD L + DY II PMDLGT+K +++ Y +
Sbjct: 375 CASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRDYKEAQ 434
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPKAGLG 222
EF +DVRL FSN YNPP++ V MA++L ++F++++ + E+ + VP G
Sbjct: 435 EFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKMPDEPEEAPAPVPSLAPG 492
>gi|323349464|gb|EGA83688.1| Bdf2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 633
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMMHP---AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK LM + F +PVDP+ L++P+YF ++ PMDLGT+ L Y D
Sbjct: 321 CLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTID 380
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+FV D+ L F N +NP N VH M ++L LF+ W
Sbjct: 381 QFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHW 418
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDP+ L+IP YF+ + PMDL ++T+L N+Y ++ +D + N + +N P
Sbjct: 153 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 212
Query: 187 ENNVHKMAQELNNLFDIKWKSL 208
E+++ MA+ + F+ K ++
Sbjct: 213 ESSISSMAKRIQKYFEKKLSAM 234
>gi|320582812|gb|EFW97029.1| hypothetical protein HPODL_1739 [Ogataea parapolymorpha DL-1]
Length = 894
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 96 PKDKRPKMDR--GVTHQCSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMD 150
P D RP+ + C ++K LM + F PVDPV LD P YF ++ +PMD
Sbjct: 565 PYDIRPRKKKFQAELRFCQQVIKELMSKKYDSISYPFLAPVDPVALDCPTYFDVVKEPMD 624
Query: 151 LGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
LGT+ ++L Y +DEF DVRL F N L+NP V+ M L ++F+ KW
Sbjct: 625 LGTIHSKLQNGEYENADEFEKDVRLVFHNCYLFNPEGTAVNIMGHRLESVFNEKW 679
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVD VKL+IP Y++ I +PMDL T++ +L+ + Y ++ + D L N + +N
Sbjct: 430 FLTPVDTVKLNIPFYYNFIKRPMDLSTIERKLNVDAYETPEQVMEDFNLMVDNCITFNGK 489
Query: 187 ENNVHKMAQELNNLFD 202
++ + +MA+ + F+
Sbjct: 490 DSAISQMARNIQASFE 505
>gi|218200605|gb|EEC83032.1| hypothetical protein OsI_28113 [Oryza sativa Indica Group]
Length = 481
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 60/106 (56%)
Query: 101 PKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
P + + +C+ IL L FN PVD +L + DY +II PMDLGTVK L
Sbjct: 131 PALQAAMRKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAF 190
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
Y + F ADVRLTFSNA+ YNP +++VH+ A L F+ +K
Sbjct: 191 GRYPSHEAFAADVRLTFSNALRYNPADHHVHRYASNLLATFEGLYK 236
>gi|449017171|dbj|BAM80573.1| similar to bromodomain containing transcription factor
[Cyanidioschyzon merolae strain 10D]
Length = 821
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKL----DIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ +LK +M F PVD KL IPDYF II +PMDLGTV+ +L+ Y
Sbjct: 339 CARVLKEIMKMKEARAFLLPVD--KLWNPDAIPDYFEIIKQPMDLGTVRQKLESGEYGTD 396
Query: 167 DE-FVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
E F DVRL +SNAM YNPP++ + +A+ LN F+ K + L
Sbjct: 397 PEAFRRDVRLVWSNAMTYNPPDSEYYNIAKMLNEAFERKMQFL 439
>gi|396464495|ref|XP_003836858.1| similar to bromodomain containing protein [Leptosphaeria maculans
JN3]
gi|312213411|emb|CBX93493.1| similar to bromodomain containing protein [Leptosphaeria maculans
JN3]
Length = 907
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ++ LM + F PVDPV L+IP Y II KPMD GT++ L LY +
Sbjct: 549 CESVMTELMKPKYSAITFPFTSPVDPVALNIPSYLKIIKKPMDFGTIERNLKNGLYQSAK 608
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
+F AD +L F N +NP + V+KM +L +LF+ WK
Sbjct: 609 DFYADAQLVFQNCYKFNPEGDAVNKMGHQLEDLFESLWK 647
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PV+PV L IP Y I+ PMDL T++ +L Y+ EF+AD+ N+ L+N
Sbjct: 362 FKDPVNPVLLGIPTYPEIVKHPMDLSTMEHKLKDKKYNNVREFMADLDQMIENSELFN-- 419
Query: 187 ENNVHKMAQELNNL 200
N H + Q NL
Sbjct: 420 -NKHHPVTQAGYNL 432
>gi|84579095|dbj|BAE72981.1| hypothetical protein [Macaca fascicularis]
Length = 617
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 253 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 312
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 313 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 353
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
MD+GT+K RL+ N Y + E + D F+N +YN P +++ MA+ L LF
Sbjct: 1 MDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 53
>gi|255732041|ref|XP_002550944.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131230|gb|EER30790.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 730
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 83/171 (48%), Gaps = 26/171 (15%)
Query: 38 SHVENWRHSSSVAESNQLMMSKPYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPK 97
S V N R S+S ES+ + S+P R K++ + P NK+ A E+
Sbjct: 330 SPVSNRRKSTS--ESDSVAASRPKR-----KIVPPKAKDLEYHTKPKNKKFAAEL----- 377
Query: 98 DKRPKMDRGVTHQCSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTV 154
C+ +K LM + + F PVD V L+IP+Y I+ +PMDLGT+
Sbjct: 378 -----------RFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYREIVKEPMDLGTI 426
Query: 155 KTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+T+L N Y D+F DVRL F N +NP +V+ M L +FD KW
Sbjct: 427 QTKLTNNEYENGDQFEKDVRLVFKNCYAFNPEGTDVNMMGHRLEAVFDKKW 477
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 109 HQCSVIL---KSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
HQ +L K + + F PVD VKL+IP Y++ I +PMDL T++ +++ Y
Sbjct: 208 HQSKFVLNVIKVIKRNREAVPFLHPVDTVKLNIPFYYNYIPRPMDLSTIERKINLKAYED 267
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKIL 225
+ + D L N +N + KMA + F EK +VP L
Sbjct: 268 VSQIIDDFNLMVKNCKKFNGEAAGISKMASNIQAQF--------EKHMVKVPPKELP--- 316
Query: 226 SGKMMEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYCARAVEVERAK 277
+ VN + P T P +S+++ SE + +S R + +AK
Sbjct: 317 ----VGVNISTVTAPATSP----VSNRRKSTSESDSVAASRPKRKIVPPKAK 360
>gi|432876083|ref|XP_004072968.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 494
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 67/117 (57%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
+ + +V++K+L H W F +PVD +KL + DY +I PMD+GT+K RL+ N Y +
Sbjct: 36 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLCLWDYHKVIKNPMDMGTIKKRLENNYYWSA 95
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
E + D F+N +YN P +++ MAQ L +F K + ++ + +P A GK
Sbjct: 96 SEAMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVALLPPAPKGK 152
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Query: 157 RLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
++D++ YS F DVRL FSN YNPP++ V MA++L ++F++++ +++
Sbjct: 176 KMDKSEYSDPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF--------AKI 227
Query: 217 PKAGL 221
P GL
Sbjct: 228 PDEGL 232
>gi|66911387|gb|AAH97199.1| LOC100004566 protein [Danio rerio]
Length = 378
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 85 NKRQAQEVIEGPKDKRPKMDRGVTHQCSVI----LKSLMMHPAGWVFNRPVDPVKLDIPD 140
N AQ P + P +T+Q + +K+L H W F+ PVD KL++PD
Sbjct: 230 NPHIAQSGPPQPAVRDPSRQGRMTNQLQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLPD 289
Query: 141 YFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNL 200
Y++II +PMD+GT+K RL+ N Y + E + D F+N +YN P +++ MAQ L
Sbjct: 290 YYNIIKQPMDMGTIKKRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKA 349
Query: 201 F 201
F
Sbjct: 350 F 350
>gi|262189359|gb|ACY30377.1| BRD2 [Salmo salar]
Length = 824
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++KSL H W F+ PVD KL +PDY II +PMD+GT+K RL+ N Y + E + D
Sbjct: 88 MMKSLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDF 147
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L F
Sbjct: 148 NTMFTNCYIYNKPTDDIVLMAQSLEKAF 175
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II +PMDL T+K ++D Y +
Sbjct: 385 CNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYRDAQ 444
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLG 222
+F DVR+ +SN YNPP+++V MA++L ++F+ + + ++ ++ P A +G
Sbjct: 445 QFAGDVRIMYSNCYKYNPPDHDVVTMARKLQDVFEFCFAKMPDEPAA--PPASMG 497
>gi|348682241|gb|EGZ22057.1| hypothetical protein PHYSODRAFT_491564 [Phytophthora sojae]
Length = 1223
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 114 ILKSLMMHPAG--WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
IL LM P VFN PVDPV L++P Y +I+ PMDLGT+K L Y ++FV+
Sbjct: 384 ILLKLMSDPRNRHGVFNTPVDPVALELPTYTTIVQHPMDLGTIKRNLAAGEYLELEDFVS 443
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
DVRL F NAML+NP + +H A+ L F+ K+ E++
Sbjct: 444 DVRLVFENAMLFNPESHYIHVDAEVLLKRFNDSVKAEEKR 483
>gi|333360985|pdb|2L5E|A Chain A, Complex Between Bd1 Of Brd3 And Gata-1 C-Tail
Length = 128
Score = 86.3 bits (212), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 57/90 (63%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 25 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 84
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D F+N +YN P +++ MAQ L +F
Sbjct: 85 DFNTMFTNCYIYNKPTDDIVLMAQALEKIF 114
>gi|340721599|ref|XP_003399205.1| PREDICTED: bromodomain-containing protein 2-like [Bombus
terrestris]
Length = 388
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+LK + H W F +PVD KL++PDY II +PMDLGT+K RL+ Y E + D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPKAGLGK 223
F+N +YN P +V MAQ L LF K + E + VPK GK
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEEVELEPPVPKGPKGK 190
>gi|148362124|gb|ABQ59651.1| BRD2 [Salmo salar]
gi|148362144|gb|ABQ59668.1| BRD2 [Salmo salar]
Length = 824
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++KSL H W F+ PVD KL +PDY II +PMD+GT+K RL+ N Y + E + D
Sbjct: 88 MMKSLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDF 147
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L F
Sbjct: 148 NTMFTNCYIYNKPTDDIVLMAQSLEKAF 175
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II +PMDL T+K ++D Y +
Sbjct: 385 CNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYRDAQ 444
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLG 222
+F DVR+ +SN YNPP+++V MA++L ++F+ + + ++ ++ P A +G
Sbjct: 445 QFAGDVRIMYSNCYKYNPPDHDVVTMARKLQDVFEFCFAKMPDEPAA--PPASMG 497
>gi|440632694|gb|ELR02613.1| hypothetical protein GMDG_05576 [Geomyces destructans 20631-21]
Length = 895
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPV L IP+YF I+ PMDL T+ L+ Y+ S +F AD+RL F N +NPP
Sbjct: 550 FLIPVDPVALGIPEYFKIVKSPMDLSTITDNLNSGHYANSKDFEADIRLMFKNCYKFNPP 609
Query: 187 ENNVHKMAQELNNLFDIKWK 206
V+ M QEL F+ +W+
Sbjct: 610 STAVNVMGQELEAFFNSEWQ 629
>gi|195149830|ref|XP_002015858.1| GL11280 [Drosophila persimilis]
gi|194109705|gb|EDW31748.1| GL11280 [Drosophila persimilis]
Length = 265
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W+F P+D L + DY I+ KPMDL +++TRL LY +DEFV DVRL F N LY
Sbjct: 41 AWIFYEPIDAPYLGLHDYHKIVKKPMDLNSIRTRLQAGLYVNADEFVRDVRLMFDNTYLY 100
Query: 184 NPPENNVHKMAQELNNLFD 202
P++ H+MA++L +F+
Sbjct: 101 TTPDHLCHQMAKKLQAIFE 119
>gi|448081188|ref|XP_004194827.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359376249|emb|CCE86831.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 645
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 94 EGPKDKRPKMDRGVTHQ--CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKP 148
E P D RP+ + C+ LK L + + F PVD V L+IP+Y II +P
Sbjct: 304 ELPYDVRPRKKKYAAELRFCNQTLKELTSKKHYSYSFPFLTPVDAVALNIPNYHEIIKEP 363
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
MDL TV+++L N Y DEF DVRL F N +NP +V+ M L ++FD KW
Sbjct: 364 MDLSTVQSKLANNQYENGDEFERDVRLIFKNCYTFNPEGTDVNMMGHRLESVFDKKW 420
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVD VKL++P Y++ I +PMDL T++ +L N Y + V D L SN + +N
Sbjct: 176 FLHPVDTVKLNVPFYYNYIKRPMDLSTIERKLAVNAYEDPSQVVDDFNLMVSNCIKFNGE 235
Query: 187 ENNVHKMAQELNNLFD 202
+ + KMA+ F+
Sbjct: 236 NSGISKMAKNTQAHFE 251
>gi|351697075|gb|EHA99993.1| Bromodomain testis-specific protein [Heterocephalus glaber]
Length = 832
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 99 KRPKMDRGVTHQCSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVK 155
KR K+ + H C+ ILK ++ W F+ PVD L + +Y+ I+ PMDLGT+K
Sbjct: 218 KRIKITEQLKH-CNEILKEMLSKKHFSYAWPFHSPVDVNALGLHNYYDIVKNPMDLGTIK 276
Query: 156 TRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
++D Y + EF ADVRL F N YN P++++ MA+ L ++F++ +
Sbjct: 277 KKMDNQEYKDAYEFAADVRLMFMNCYKYNSPDHDIVAMAKTLQDVFEVHF 326
>gi|353235918|emb|CCA67923.1| related to TAF2-component of TFIID complex [Piriformospora indica DSM
11827]
Length = 1782
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 106 GVTHQ----CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
G+T Q ILK + HP+ F PVDPV+ + P YF +I PMDL TV ++L
Sbjct: 1231 GLTSQEKKMIEAILKRVTAHPSAIWFLHPVDPVRHNAPTYFDVIKHPMDLSTVASKLKSG 1290
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
Y +F D +L SNA L+NPP + H A ++ FD WK+ ++
Sbjct: 1291 QYGNRQQFADDFKLILSNAYLFNPPGTDPHNDALKIEEFFDKMWKTTDD 1339
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 94 EGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISK--PMDL 151
E P + KM + Q + L L +F+ PVDP+ L IP YF +I++ DL
Sbjct: 1651 EWPSMLKRKMPAELKRQLAQALNQLKAEDVNMIFHFPVDPIALGIPHYFDVIAREDARDL 1710
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQEL----NNLFD 202
T+K +LD+ Y +++ DVRL FSNA +N ++ V +A L N L++
Sbjct: 1711 STIKAKLDKGGYQTAEQVHRDVRLMFSNAYKFNGRDSPVSSVAAALEASWNRLYN 1765
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C +L+ L P GW+F PV+ + Y+ I PMD T++ +LD+ Y+ ++F
Sbjct: 1557 KCKALLQKLADVPHGWIFLNPVNSTLPGLETYYEEIKHPMDYSTMRRKLDKKQYATMEDF 1616
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
D+RL ++N +N ++ + + L+ +W S+
Sbjct: 1617 ADDLRLVYANGRQFNAAAPDILDLIDTIEALWKKEWPSM 1655
>gi|195397557|ref|XP_002057395.1| GJ16365 [Drosophila virilis]
gi|194147162|gb|EDW62881.1| GJ16365 [Drosophila virilis]
Length = 429
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P +RP + T+Q ++K++M H W F +PVD KL++PDY II +PMD+
Sbjct: 27 PPQERPGRN---TNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDM 83
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
GT+K RL+ N Y + E + D F+N +YN P +V MAQ L +F K +S+
Sbjct: 84 GTIKKRLENNYYWSAKEAIHDFNTMFTNCYVYNKPGEDVVVMAQTLEKVFLQKIESM 140
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L H W F +PVD L + DY II KPMDLGTVK ++D Y +
Sbjct: 349 CNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAP 408
Query: 168 EFVA 171
EF A
Sbjct: 409 EFAA 412
>gi|405121726|gb|AFR96494.1| transcription initiation factor TFIId subunit [Cryptococcus
neoformans var. grubii H99]
Length = 1728
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 94 EGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGT 153
+GPK +R + + L L+ + F +PVDPV+ PDY +II KPMDL T
Sbjct: 1176 DGPKAQRKGLSDNDFKAIVIALNKLVTDKRSFFFRQPVDPVRDMAPDYLTIIKKPMDLST 1235
Query: 154 VKTRLDRNLYSVSDEFVADVRLTFSNAMLYN-PPENNVHKMAQELNNLFDIKWKSLEEKW 212
++ +LD +Y+ +FV+D+RL SN YN P + V K + LF+ W E
Sbjct: 1236 IRAKLDNGMYTSRQDFVSDIRLIISNCYTYNSTPTSPVRKAGEAFEKLFNTLWAKTENTL 1295
Query: 213 SSE 215
S++
Sbjct: 1296 SAQ 1298
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 108 THQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
T + +L +L P+ +F RPVDP+ P Y I PMDLGT+ ++D+ Y
Sbjct: 1516 TKRAKALLTTLQKEPSAILFLRPVDPILDGCPTYLDEIKHPMDLGTIGKKIDQKKYKTMG 1575
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+F D+ L F+N +NPP + +A ++ ++ W +
Sbjct: 1576 QFARDIELVFANCRQFNPP-GEITALADKVEEVYWRDWPKI 1615
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSII--SKPMDLGTVKTRLDRNLYSVSDEFVA 171
+L + +P F PVDP+ L IP YF II DLG +K +L++ Y + +
Sbjct: 1631 MLNQALKNPLSEWFRLPVDPIALGIPQYFDIIPPEDARDLGLIKLKLEKGQYQTAKQVDE 1690
Query: 172 DVRLTFSNAMLYN 184
DV L NA ++N
Sbjct: 1691 DVELMLENARVFN 1703
>gi|259090118|pdb|2WP2|A Chain A, Structure Of Brdt Bromodomain Bd1 Bound To A Diacetylated
Histone H4 Peptide.
gi|259090119|pdb|2WP2|B Chain B, Structure Of Brdt Bromodomain Bd1 Bound To A Diacetylated
Histone H4 Peptide
Length = 120
Score = 85.9 bits (211), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 58/99 (58%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F +PVD VKL +PDY++II PMDL T+K RL+ Y + E + D
Sbjct: 21 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 80
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
FSN LYN +++ MAQ L LF K + ++
Sbjct: 81 FNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQMPQE 119
>gi|448085671|ref|XP_004195918.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359377340|emb|CCE85723.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 637
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 94 EGPKDKRPKMDRGVTHQ--CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKP 148
E P D RP+ + C+ LK L + + F PVD V L+IP+Y II +P
Sbjct: 296 ELPYDVRPRKKKYAAELRFCNQTLKELTSKKHYSYSFPFLTPVDAVALNIPNYHEIIKEP 355
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
MDL TV+++L N Y DEF DVRL F N +NP +V+ M L ++FD KW
Sbjct: 356 MDLSTVQSKLANNQYENGDEFEHDVRLIFKNCYTFNPEGTDVNMMGHRLESVFDKKW 412
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVD VKL++P Y++ I +PMDL T++ ++ N Y + V D L SN + +N
Sbjct: 168 FLHPVDTVKLNVPLYYNYIKRPMDLSTIERKIAVNAYEDPSQVVDDFNLMVSNCIKFNGE 227
Query: 187 ENNVHKMAQELNNLFD 202
+ + KMA+ F+
Sbjct: 228 NSGISKMAKNTQAHFE 243
>gi|149237571|ref|XP_001524662.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451259|gb|EDK45515.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 788
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 94 EGPKDKRPKMDRGVTHQ--CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKP 148
E P D RP+ + C +K LM + F PVD V L+IP+Y I+ P
Sbjct: 418 ELPYDVRPRKKKFAAELRFCGQTIKELMSKKHQNYNFPFLAPVDAVALNIPNYHDIVKHP 477
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
MD GT++++L N Y D+F DV+L F N L+NP +V+ M + +FD KW
Sbjct: 478 MDFGTIQSKLTNNQYESGDDFEKDVKLVFHNCYLFNPEGTDVNMMGHRMEAVFDKKW 534
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVD VKL+IP Y++ I +PMDL T++ +L+ Y +F D L +N +N
Sbjct: 278 FLHPVDTVKLNIPFYYNYIPRPMDLSTIERKLNAKAYEDISQFADDFNLMVANCKKFNGE 337
Query: 187 ENNVHKMAQELNNLFD 202
+ +MA + F+
Sbjct: 338 TAGISRMATNIQAHFE 353
>gi|47208417|emb|CAF92198.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1579
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F +PVD L + DY II PMDL T+K +L+ Y EF ADVRL FSN Y
Sbjct: 459 AWPFYKPVDADALGLHDYHDIIKHPMDLSTIKVKLENRQYREPQEFAADVRLMFSNCYKY 518
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLEEK 211
NPP++ V MA++L ++F++++ + ++
Sbjct: 519 NPPDHEVVAMARKLQDVFEMRFAKMPDE 546
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 32/121 (26%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIP--------------------------------D 140
++LK+L H W F+ PVD VKL++P D
Sbjct: 50 MVLKTLWKHQFAWPFHAPVDAVKLNLPVSVAPRDCSHLDIQYKYYTQFCEVNCQMQSLQD 109
Query: 141 YFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNL 200
Y++II PMD+GT+K RL+ + Y + E + D F+N +YN P +++ MA+ L +
Sbjct: 110 YYTIIKTPMDMGTIKKRLENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKV 169
Query: 201 F 201
F
Sbjct: 170 F 170
>gi|313212448|emb|CBY36425.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 19/163 (11%)
Query: 107 VTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
+T+Q I K + M H W F +PVDPV+L++PDYF+II PMD+ T+K +L
Sbjct: 9 MTNQLQYIKKHIFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYSGQ 68
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL-------EEKWSSE 215
Y + + +AD L F N YN P +++ M +++ +L K K++ E++ +
Sbjct: 69 YESAKQCIADYDLMFENCYNYNRPTDDISIMGKKIQDLLHTKCKNMPQVEAVVEKQKRKK 128
Query: 216 VPKAGLGKILSGKMMEVNDTRQNCPKTP----PLHSTLSSKKS 254
P GLG +SG TR P TP P+ S S KS
Sbjct: 129 NPLDGLG--VSGST--PVGTRDRNPPTPMSIDPVPSPAPSSKS 167
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Query: 86 KRQAQEV--IEGPKDKRPKMDRGVTHQCSVILKSLMM---HPAGWVFNRPVDPVKLDIPD 140
KR+ + + +GP K + C+ IL+ L W F PVD L++ D
Sbjct: 213 KRKTESISSFDGPAKKSSMPKKKEMRVCAAILRELHQKRHQQYAWPFYVPVDVKGLELHD 272
Query: 141 YFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNL 200
Y+ +I +PMDL + +D ++Y+ +EF+AD+ L F N YNPP++ V +MA L +
Sbjct: 273 YYDVIKRPMDLSLAQKNIDNDMYNDKNEFIADIMLIFENCRAYNPPDHEVVQMANRLQKV 332
Query: 201 FDIK 204
F+ K
Sbjct: 333 FEAK 336
>gi|349805091|gb|AEQ18018.1| hypothetical protein [Hymenochirus curtipes]
Length = 497
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F +PVD L + DY II PMDLGT+K +++ Y EF ADVRL FSN Y
Sbjct: 115 AWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENREYKEPQEFAADVRLMFSNCYKY 174
Query: 184 NPPENNVHKMAQELNNLFDIKWKSL 208
NPP++ V MA++L ++F++++ +
Sbjct: 175 NPPDHEVVIMARKLQDVFEMRFAKM 199
>gi|401842077|gb|EJT44353.1| BDF2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 634
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
+ F +PVDP+ L++P+YF II PMDLGT+ L Y D+F+ DV L F N +
Sbjct: 339 NFPFLQPVDPIALNLPNYFEIIKNPMDLGTISNNLMNWKYKTVDQFINDVNLVFLNCFQF 398
Query: 184 NPPENNVHKMAQELNNLFDIKW 205
NP N VH M ++L LF + W
Sbjct: 399 NPEGNEVHLMGKKLKELFSVHW 420
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDP+ L+IP YF+ + PMDL + +L + Y ++ +D R +N + +N
Sbjct: 155 FLNPVDPIALNIPHYFNYVQTPMDLSLIGKKLQESTYHSVEQVKSDFRTMVNNCLSFNGL 214
Query: 187 ENNVHKMAQELNNLFDIKWKSL 208
E++V MA+ + F+ K ++
Sbjct: 215 ESSVSLMAKRIQIYFERKLSAM 236
>gi|50303459|ref|XP_451671.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640803|emb|CAH02064.1| KLLA0B03113p [Kluyveromyces lactis]
Length = 661
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLG 152
PK K+ +M+ C +LK L+ + F PVDPV L+ P YF + +PMDLG
Sbjct: 273 PKSKKHQMEMKF---CQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLG 329
Query: 153 TVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
TV+ +L+ Y S+EF DVRL F N +NP V+ M L ++F+ KW
Sbjct: 330 TVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKW 382
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F++PVDPV L+IP YF+ I +PMDL T++ +L+ + Y ++ D L SN + +N
Sbjct: 139 FHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGD 198
Query: 187 ENNVHKMAQELNNLFD 202
+ + +MA+ + F+
Sbjct: 199 KAVISQMARNIQASFE 214
>gi|384496605|gb|EIE87096.1| hypothetical protein RO3G_11807 [Rhizopus delemar RA 99-880]
Length = 1667
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
++IL++ M +P + F RPVDPVK +P YF+II +PMDLGTV+T+L N Y+ E
Sbjct: 1253 TIILRA-MSNPHAFEFLRPVDPVKQGVPHYFTIIKEPMDLGTVETKLRNNEYTNPLEMNE 1311
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
D+RL F N +NPP V+ A+ L ++ W+
Sbjct: 1312 DIRLVFRNCYTFNPPNTYVYNEAKMLEEDYNKDWQ 1346
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 103 MDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
MD +C I+K L H A F++PVD + +P Y+ +I +PMDL ++ D++
Sbjct: 1410 MDSNNKKKCERIIKKLWAHQASAAFHKPVDAIAEGVPHYYDVIKRPMDLSVIQRNFDQDK 1469
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
+ E D+R F N +N + V K Q L F+ W +
Sbjct: 1470 FKNIWELERDIRQIFWNCYSFNHHGSWVVKQCQALEAFFNQIWSA 1514
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C +L + H F +PVD V P+Y+ II PMDL +K +++ Y+ +F
Sbjct: 1050 KCRRVLNKINKHGCALPFVQPVDEVLDGAPNYYKIIKNPMDLSLIKRKVENKEYTTFRQF 1109
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
D+RL +N YN P V+ Q L +F+
Sbjct: 1110 EDDIRLMLNNCYTYNGPGTYVYNEGQALEAVFE 1142
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++ +L +FN PVD L PDY II KPMDL T+ RL+ Y+ D+
Sbjct: 1533 VINNLTYRECAALFNEPVDLSAL--PDYAQIIKKPMDLRTIWERLESGKYTSLKAIDQDI 1590
Query: 174 RLTFSNAMLYN 184
RL F N YN
Sbjct: 1591 RLVFKNCFTYN 1601
>gi|122921158|pdb|2NXB|A Chain A, Crystal Structure Of Human Bromodomain Containing Protein
3 (Brd3)
gi|122921159|pdb|2NXB|B Chain B, Crystal Structure Of Human Bromodomain Containing Protein
3 (Brd3)
gi|340708299|pdb|3S91|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd3
In Complex With The Inhibitor Jq1
Length = 123
Score = 85.9 bits (211), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 57/90 (63%)
Query: 112 SVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
+V++K+L H W F +PVD +KL++PDY II PMD+GT+K RL+ N Y + E +
Sbjct: 23 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 82
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D F+N +YN P +++ MAQ L +F
Sbjct: 83 DFNTMFTNCYIYNKPTDDIVLMAQALEKIF 112
>gi|255577689|ref|XP_002529721.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223530823|gb|EEF32687.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 391
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 69 MIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFN 128
++ ++KER S+ P ++Q Q+ + +M + + Q IL+ + H W F
Sbjct: 72 IVKDNNNKERHSV-PSIRKQQQDASKREAAASKRM-QELMRQFGTILRQITQHKWAWPFM 129
Query: 129 RPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLYSVSDEFVADVRLTFSNAMLYNP 185
+PVD L + DY+ +I KPMD T+K ++ D Y E ADVRL F NAM YN
Sbjct: 130 QPVDVKGLGLHDYYEVIDKPMDFSTIKNQMETKDGTGYKNVREICADVRLVFKNAMKYND 189
Query: 186 PENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
++VH MA+ L F EEKW +PK
Sbjct: 190 ERSDVHVMAKTLLAKF-------EEKWLQLLPKV 216
>gi|294462729|gb|ADE76909.1| unknown [Picea sitchensis]
Length = 377
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q S IL+ + H W F PVD L + DY +I KPMD GT++ ++ D Y
Sbjct: 109 LMRQFSTILRQITQHRWAWPFMTPVDVKGLGLHDYHDVIKKPMDFGTIRRKMDAKDATGY 168
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+ DVRL F NA+ YN +++VH MA+ L+ F+ KWK+L
Sbjct: 169 KNVCDICEDVRLVFKNAVTYNDDQSDVHVMAKTLSQKFEEKWKTL 213
>gi|361126444|gb|EHK98445.1| putative Bromodomain-containing factor 1 [Glarea lozoyensis 74030]
Length = 824
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPV L+IP+YF+II PMDL TV + L +Y + EF DVRL F+N +NP
Sbjct: 468 FLEPVDPVALNIPNYFTIIKNPMDLQTVTSNLRNGVYPSAKEFERDVRLIFANCFKFNPA 527
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
N V++M + ++F+ +W+ ++ W +E
Sbjct: 528 NNPVNEMGKRFLDVFNHEWEK-KQSWVAE 555
>gi|261278848|pdb|3JVL|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
gi|261278849|pdb|3JVM|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
Length = 120
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 14 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQ 73
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 74 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 114
>gi|66826485|ref|XP_646597.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
gi|74858341|sp|Q55C84.1|Y0170_DICDI RecName: Full=Bromodomain-containing protein DDB_G0270170
gi|60474498|gb|EAL72435.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
Length = 1578
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 53/96 (55%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V +C +L+ L H F VDP L I DYF +I PMDLGT+K L Y
Sbjct: 740 VFKRCLDLLEELFEHQHSPPFLVAVDPYALGILDYFDVIKHPMDLGTIKASLIGGGYDTI 799
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
D+F D RL FSNA YNP N VH MAQ L ++F+
Sbjct: 800 DKFAEDCRLVFSNAKTYNPSTNPVHIMAQSLEDVFE 835
>gi|395759239|pdb|2LSP|B Chain B, Solution Structures Of Brd4 Second Bromodomain With
Nf-Kb-K310ac Peptide
Length = 128
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 25 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 84
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 85 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 125
>gi|298706227|emb|CBJ29268.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 898
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C L+ L+ H G F PVDP + PDY +I +PMDLGTV LD Y + FV
Sbjct: 61 CRQALEELIRHQHGAPFTAPVDPTRDRCPDYLMVIEQPMDLGTVAETLDAMKYHDAGAFV 120
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQEL 197
+DVRL F NA YNPP++ +H A +L
Sbjct: 121 SDVRLIFDNARKYNPPKHPIHVAASKL 147
>gi|185134173|ref|NP_001117185.1| bromodomain containing 2 [Salmo salar]
gi|148362162|gb|ABQ59684.1| BRD2 [Salmo salar]
Length = 815
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II +PMDL T+K ++D Y +
Sbjct: 381 CNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYRDAQ 440
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLG 222
+F DVR+ +SN YNPP+++V MA++L ++F+ + + ++ ++ P A +G
Sbjct: 441 QFAGDVRIMYSNCYKYNPPDHDVVAMARKLQDVFEFCFAKMPDEPAA--PPASMG 493
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K L H W F+ PVD KL +PDY II +PMD+GT+K RL+ N Y + E + D
Sbjct: 88 MMKYLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDF 147
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L F
Sbjct: 148 NTMFTNCYIYNKPTDDIVLMAQSLEKAF 175
>gi|134105429|pdb|2OUO|A Chain A, Crystal Structure Of The Bromo Domain 2 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|340707485|pdb|2YEM|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|340707486|pdb|2YEM|B Chain B, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
Length = 130
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 27 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 86
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 87 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 127
>gi|146147391|gb|ABQ01994.1| bromodomain containing 2 [Salmo salar]
gi|148362147|gb|ABQ59670.1| BRD2 [Salmo salar]
Length = 815
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ ILK L+ H A W F +PVD L + DY II +PMDL T+K ++D Y +
Sbjct: 381 CNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYRDAQ 440
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLG 222
+F DVR+ +SN YNPP+++V MA++L ++F+ + + ++ ++ P A +G
Sbjct: 441 QFAGDVRIMYSNCYKYNPPDHDVVAMARKLQDVFEFCFAKMPDEPAA--PPASMG 493
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K L H W F+ PVD KL +PDY II +PMD+GT+K RL+ N Y + E + D
Sbjct: 88 MMKYLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDF 147
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ L F
Sbjct: 148 NTMFTNCYIYNKPTDDIVLMAQSLEKAF 175
>gi|313226820|emb|CBY21965.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 19/163 (11%)
Query: 107 VTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
+T+Q I K + M H W F +PVDPV+L++PDYF+II PMD+ T+K +L
Sbjct: 9 MTNQLQYIKKHIFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYGGQ 68
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL-------EEKWSSE 215
Y + + +AD L F N YN P +++ M +++ +L K K++ E++ +
Sbjct: 69 YESAKQCIADYDLMFENCYNYNRPTDDISIMGKKIQDLLHTKCKNMPQVEAVVEKQKRKK 128
Query: 216 VPKAGLGKILSGKMMEVNDTRQNCPKTP----PLHSTLSSKKS 254
P GLG +SG TR P TP P+ S S KS
Sbjct: 129 NPLDGLG--VSGST--PVGTRDRNPPTPMSIDPVPSPAPSSKS 167
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Query: 86 KRQAQEV--IEGPKDKRPKMDRGVTHQCSVILKSLMM---HPAGWVFNRPVDPVKLDIPD 140
KR+ + + +GP K + C+ IL+ L W F PVD L++ D
Sbjct: 213 KRKTESISSFDGPAKKSSMPKKKEMRVCAAILRELHQKRHQQYAWPFYVPVDVKGLELHD 272
Query: 141 YFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNL 200
Y+ +I +PMDL + +D ++Y+ +EF+AD+ L F N YNPP++ V +MA L +
Sbjct: 273 YYDVIKRPMDLSLAQKNIDNDMYNDKNEFIADIMLIFENCRAYNPPDHEVVQMANRLQKV 332
Query: 201 FDIK 204
F+ K
Sbjct: 333 FEAK 336
>gi|261199936|ref|XP_002626369.1| transcription regulator BDF1 [Ajellomyces dermatitidis SLH14081]
gi|239594577|gb|EEQ77158.1| transcription regulator BDF1 [Ajellomyces dermatitidis SLH14081]
gi|239607966|gb|EEQ84953.1| transcription regulator BDF1 [Ajellomyces dermatitidis ER-3]
Length = 898
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +L L P F PVDPV L+IP Y SII KPMDL TV+TRL Y +
Sbjct: 534 CQEVLDELHKKKHEPIALPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTRLQTGQYENAK 593
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
E AD+RL F N +N P + + + L +FD KW S + +W
Sbjct: 594 EMEADIRLIFKNCYKFNIPGDPTYNAGKSLEEVFDNKW-SQKRRW 637
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPVKL+IP+Y II +PMDL T++ +L Y+ ++D L N++ +N P
Sbjct: 351 FREPVDPVKLNIPNYPLIIKQPMDLRTIEEKLKSGSYASLAAVISDFDLMIDNSVTFNGP 410
Query: 187 ENNVHKMAQELNNLFD 202
E+ V L F+
Sbjct: 411 EHMVSVEGLRLKQNFE 426
>gi|268578307|ref|XP_002644136.1| Hypothetical protein CBG04495 [Caenorhabditis briggsae]
Length = 876
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
VF PVDP+KL I DY ++ PMDL T+K +LD Y+ +EFVAD+ L N LYNP
Sbjct: 365 VFYVPVDPIKLKIADYLDVVKNPMDLQTMKKKLDHKQYAEPEEFVADMNLMIDNCCLYNP 424
Query: 186 PENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVN 233
++V++ A +L LF+ +WK P G+ I+S + N
Sbjct: 425 KGSSVYQNALDLKALFEQRWKLF--------PSPGVDPIVSDSYIHQN 464
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%)
Query: 89 AQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKP 148
Q E PK K + + H ++K + H W F PV+ V L IPDY I++P
Sbjct: 54 VQPRTEPPKGKPTRHTNCLDHLLFTVIKEAVKHKHSWPFQEPVNAVALAIPDYHKTITRP 113
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNL 200
MDL T++ RL + Y D+ + D+ F N +N ++++ M + + +
Sbjct: 114 MDLRTIEKRLRNSYYWSVDDAIKDLNTLFQNCKTFNDNNDDIYIMCENVEGV 165
>gi|89267975|emb|CAJ81450.1| bromodomain, testis-specific [Xenopus (Silurana) tropicalis]
Length = 438
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ILK ++ H A W F +PVD L++ DY II PMDL +VK ++D Y+ +
Sbjct: 324 CDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMDAREYADAQ 383
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
F AD+RL FSN YNPP++ V MA++L ++F++++ + +
Sbjct: 384 AFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPD 426
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%)
Query: 116 KSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRL 175
K+L H W F +PVD VKL++PDY II PMD+GT+K RL+ N Y ++E + D
Sbjct: 1 KTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSANECMQDFNT 60
Query: 176 TFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
F+N +YN +++ MAQ L +F K + ++ +P A GK
Sbjct: 61 MFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK 108
>gi|224098028|ref|XP_002311109.1| global transcription factor group [Populus trichocarpa]
gi|222850929|gb|EEE88476.1| global transcription factor group [Populus trichocarpa]
Length = 370
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q IL+ + H W F +PVD L + DY+ +I KPMD T+K ++ D Y
Sbjct: 90 LMRQFGTILRQITQHKWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGY 149
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
E ADVRL F NAM YN ++VH MA+ L F EEKW +PK
Sbjct: 150 KSVREICADVRLVFKNAMKYNDERSDVHVMAKTLLGKF-------EEKWLQFLPKV 198
>gi|313232668|emb|CBY19338.1| unnamed protein product [Oikopleura dioica]
Length = 814
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 108 THQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
T+Q I K +++ H W F +PVDPV L +PDY+ ++ KPMDL T+K + D Y
Sbjct: 14 TNQLDFIRKEILVKVQKHQHSWPFQKPVDPVALALPDYYEVVKKPMDLSTIKKKFDTYQY 73
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+ E ++D + FSN LYN P ++V M Q + + F
Sbjct: 74 NSGAEALSDFEVMFSNCYLYNKPTDDVTLMCQAVESAF 111
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLG 152
P++K+PK R + +L ++F PVD KL +PDY II+ PMD+G
Sbjct: 211 PENKKPKKRRRWLSGAKGAIDALFAPEYQSVSYLFYEPVDYKKLKLPDYPKIITHPMDMG 270
Query: 153 TVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW----KSL 208
TV+ +L YS E D+ L F N YNPP N+V K A++L+ +F W ++L
Sbjct: 271 TVRQKLVDGKYSDPMEVQKDMELMFHNCYRYNPPSNSVVKAAKKLDTIFHKIWNIYLRTL 330
Query: 209 EEKWSSEV 216
E EV
Sbjct: 331 ESHGEEEV 338
>gi|157834826|pdb|2DVV|A Chain A, Crystal Structure Of The Second Bromodomain Of The Human
Brd2 Protein
gi|162329881|pdb|2E3K|A Chain A, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329882|pdb|2E3K|B Chain B, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329883|pdb|2E3K|C Chain C, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329884|pdb|2E3K|D Chain D, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
Length = 112
Score = 85.5 bits (210), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 110 QCSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C+ ILK L+ H A W F +PVD L + DY II PMDL TVK +++ Y +
Sbjct: 9 HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDA 68
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
EF ADVRL FSN YNPP+++V MA++L ++F+ ++ + +
Sbjct: 69 QEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD 112
>gi|428181667|gb|EKX50530.1| hypothetical protein GUITHDRAFT_60002, partial [Guillardia theta
CCMP2712]
Length = 71
Score = 85.1 bits (209), Expect = 9e-14, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 49/71 (69%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPV ++ DYF ++ +PMDLGTV +L+ N YS + DV TF NA LYNPP
Sbjct: 1 FLEPVDPVSMNAYDYFEVVKRPMDLGTVDKKLENNQYSTCAYLLYDVLSTFKNACLYNPP 60
Query: 187 ENNVHKMAQEL 197
EN VH++AQ++
Sbjct: 61 ENKVHQLAQDM 71
>gi|327350418|gb|EGE79275.1| transcription regulator BDF1 [Ajellomyces dermatitidis ATCC 18188]
Length = 943
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +L L P F PVDPV L+IP Y SII KPMDL TV+TRL Y +
Sbjct: 583 CQEVLDELHKKKHEPIALPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTRLQTGQYENAK 642
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
E AD+RL F N +N P + + + L +FD KW S + +W
Sbjct: 643 EMEADIRLIFKNCYKFNIPGDPTYNAGKSLEEVFDNKW-SQKRRW 686
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPVKL+IP+Y II +PMDL T++ +L Y+ ++D L N++ +N P
Sbjct: 400 FREPVDPVKLNIPNYPLIIKQPMDLRTIEEKLKSGSYASLAAVISDFDLMIDNSVTFNGP 459
Query: 187 ENNVHKMAQELNNLFD 202
E+ V L F+
Sbjct: 460 EHMVSVEGLRLKQNFE 475
>gi|115475161|ref|NP_001061177.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|40253661|dbj|BAD05604.1| putative RNA-binding protein Virp1a [Oryza sativa Japonica Group]
gi|113623146|dbj|BAF23091.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|215678743|dbj|BAG95180.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765310|dbj|BAG87007.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767863|dbj|BAH00092.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640052|gb|EEE68184.1| hypothetical protein OsJ_26323 [Oryza sativa Japonica Group]
Length = 481
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 59/106 (55%)
Query: 101 PKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
P + + +C+ IL L FN PVD +L + DY +II PMDLGTVK L
Sbjct: 131 PALQAAMRKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAF 190
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
Y + F DVRLTFSNA+ YNP +++VH+ A L F+ +K
Sbjct: 191 GRYPSHEAFATDVRLTFSNALRYNPADHHVHRYASNLLATFEGLYK 236
>gi|189198604|ref|XP_001935639.1| bromodomain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187982738|gb|EDU48226.1| bromodomain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 851
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +L LM + F PVDPV L+IP Y II KPMD GT++ L +Y +
Sbjct: 491 CESVLTELMKPKYSAVTYPFITPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQSAK 550
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
+F AD +L F N +NP + V++M +L +LF+ WK
Sbjct: 551 DFYADAQLVFQNCYKFNPEGDAVNQMGHKLEDLFESLWK 589
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
F PVDPV L IP Y I+ PMDL T++++L Y+ +F+AD+ +N+ L+N
Sbjct: 303 AFKDPVDPVALGIPQYPEIVKHPMDLSTMESKLKEKKYTYVRDFMADLDQMITNSELFN- 361
Query: 186 PENNVHKMAQELNNL 200
N H + Q NL
Sbjct: 362 --NKQHPVTQAGYNL 374
>gi|301627667|ref|XP_002942992.1| PREDICTED: nucleosome-remodeling factor subunit BPTF-like [Xenopus
(Silurana) tropicalis]
Length = 2868
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDPV D PDY+ +I +PMDL T++ R+ Y EFVAD+
Sbjct: 2762 VLRSLQSHKMAWPFQEPVDPV--DAPDYYGVIKEPMDLSTIEERIKTRFYKKLTEFVADM 2819
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
F N YNP ++ ++ A+ L + F K K+ +
Sbjct: 2820 TKIFDNCRYYNPSDSFFYQSAEVLESFFVQKLKAFK 2855
>gi|226493082|ref|NP_001142377.1| hypothetical protein [Zea mays]
gi|194708534|gb|ACF88351.1| unknown [Zea mays]
gi|414585390|tpg|DAA35961.1| TPA: hypothetical protein ZEAMMB73_681303 [Zea mays]
Length = 451
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 57/100 (57%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V +C IL L FN PV+ +L + DY ++I +PMDLGTVK L Y+
Sbjct: 109 VRKRCGQILTRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYASH 168
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
D+F ADVRLTF+NA+ YNP + VH A L F+ +K
Sbjct: 169 DDFAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYK 208
>gi|403358213|gb|EJY78743.1| Histone acetyltransferase gcn5 [Oxytricha trifallax]
Length = 465
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 104 DRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
+R QC ILK L+ H + VF +PVDP K +PDY II +PMDL ++ L+ +LY
Sbjct: 288 ERTFQEQCQKILKFLLDHESSRVFRKPVDPKK--VPDYHQIIREPMDLEKIQKNLNESLY 345
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGK 223
D+F D+ F NA YN PE +K A +L L + E S E L
Sbjct: 346 HTVDQFKKDLIKIFDNARQYNNPETIYYKYANQLQALVKPMLDRMRENNSFEKDIKMLQN 405
Query: 224 ILSGKMMEVN---------------DTRQNCPKTPPLHST 248
+ + ++VN D N P+ P +H +
Sbjct: 406 VTGQQSLQVNSQSMGDVNMESYDQGDNSSNVPENPSVHGS 445
>gi|406862248|gb|EKD15299.1| transcription regulator [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 912
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
+F PVDPV L+IP YF+II KPMDL T+ +L Y + EF D+RL +N +NP
Sbjct: 553 IFQFPVDPVALNIPTYFTIIKKPMDLSTMSNKLKSGSYGNASEFEKDMRLMLANCYKFNP 612
Query: 186 PENNVHKMAQELNNLFDIKWKSLEEKW 212
P N V+++ + LF+ +W+ +++W
Sbjct: 613 PPNMVNELGKRFEELFNKQWEQ-KDQW 638
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 108 THQCSVILKSLMMHPAGWVFNRPVDPVKLDI-PDYFSIISKPMDLGTVKTRLDRNLYSVS 166
Q S LKS + G F PV + DI +Y S ISKP+DL T+ +L +Y
Sbjct: 328 VQQLSQALKSACKNRNGLNFRGPVVELWPDIKTNYLSRISKPIDLKTMDHKLTSGVYRFM 387
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMA 194
+EF +D+ L ++N + +N ++V K A
Sbjct: 388 EEFTSDLHLLYNNTLTFNGQFHDVSKAA 415
>gi|443691011|gb|ELT92995.1| hypothetical protein CAPTEDRAFT_169335 [Capitella teleta]
Length = 1173
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 111 CSVILKSLMM--HPAG--WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
CS ++K L H AG W F +PVD L + DY +I +PMDLG+++ +L+ Y
Sbjct: 328 CSGVIKELFAKKH-AGYAWPFYKPVDADLLGLHDYHEMIKRPMDLGSIRQKLETREYESP 386
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL-EEKWSSEVP 217
EF +VRL F+N YNPPE++V MA++L ++F++++ + +E E P
Sbjct: 387 AEFAEEVRLIFTNCYRYNPPESDVVMMAKKLQDVFEMRYARMPDEPLGGESP 438
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK+L H W F+ PVD VKL++ DY+ II PMD+GT+K RL+ Y + E + D
Sbjct: 53 VVLKALWKHQFSWPFHTPVDAVKLNLHDYYKIIKHPMDMGTIKKRLENQYYHRAQECIQD 112
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F+N YN ++ M Q + F +K +
Sbjct: 113 WNQMFTNCYTYNKAGEDITVMCQAVEKQFVLKLSGM 148
>gi|441637323|ref|XP_004090057.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 872
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 10/133 (7%)
Query: 79 SSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM---HPAGWVFNRPVDPVK 135
+++LP +++Q V K K+ + H CS ILK ++ W F PVD
Sbjct: 178 TNVLPDSQQQYNVV------KSVKVTEQLRH-CSEILKEMLAKKHFSYAWPFYNPVDVNA 230
Query: 136 LDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQ 195
L + +Y+ I+ PMDLGT+K ++D Y + +F ADVRL F N YNPP++ V MA+
Sbjct: 231 LGLHNYYDIVKNPMDLGTIKEKMDNQEYEDAYKFAADVRLMFMNCYKYNPPDHEVVTMAR 290
Query: 196 ELNNLFDIKWKSL 208
L ++F+ + +
Sbjct: 291 MLQDVFETHFSKI 303
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
MDL T+K RL+ Y+ + E + D FSN LYN P +++ MAQ L LF K
Sbjct: 1 MDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKL--- 57
Query: 209 EEKWSSEVPKAGLGKILSGKMMEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKAARSSYCA 268
S++P+ +++ GK T+QN + +L S K+ +++A S +
Sbjct: 58 -----SQMPQE--EQVVGGKERIKKGTQQNIAVSSAKEKSLPSTTEKVFKQQAIPSVFPK 110
Query: 269 RAVE-VERAKPAQNLSSKLVIKNLHKGTN---DGGRLACNIVNAKPPLSPV 315
++ + A+ A SS + KG D A + V A SP+
Sbjct: 111 TSISPLNVAQGASVNSSSQTAAQVTKGVKRKADTTTPATSAVKASSEFSPI 161
>gi|195392286|ref|XP_002054790.1| GJ22598 [Drosophila virilis]
gi|194152876|gb|EDW68310.1| GJ22598 [Drosophila virilis]
Length = 354
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+LK + + F PVD V L IPDY ++I PMDL T++ RL+ N Y SDE + D
Sbjct: 51 VLKYVWKSRWSYYFRYPVDAVALCIPDYHNLIKHPMDLSTIRRRLNNNYYWKSDEALGDF 110
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE-VPKAGLGKILSGKMMEV 232
L F N MLYN + VHK +EL F + ++ +E +P+A L K + MM++
Sbjct: 111 ELIFENCMLYNLEGSEVHKAGKELREAFYTRLSYIDMSNETELIPQAVLRKRKAESMMQL 170
Query: 233 NDTRQNC--PKTPPL 245
N + C P TP L
Sbjct: 171 NPIYE-CVTPATPKL 184
>gi|389608049|dbj|BAM17630.1| putative RING3 protein [Oryza sativa Indica Group]
Length = 456
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%)
Query: 102 KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
K+ + +C IL L FN PV+ +L + DY ++I PMDLGTV+ L
Sbjct: 115 KLRAAMRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAG 174
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
YS D+F ADVRLTFSNA+ YNP + VH A +L F+ +K+ + E+
Sbjct: 175 RYSSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKAFMSWFEQEL 229
>gi|116309747|emb|CAH66790.1| H0215F08.1 [Oryza sativa Indica Group]
gi|116309918|emb|CAH66952.1| B0809H07.7 [Oryza sativa Indica Group]
Length = 456
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%)
Query: 102 KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
K+ + +C IL L FN PV+ +L + DY ++I PMDLGTV+ L
Sbjct: 115 KLRAAMRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAG 174
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
YS D+F ADVRLTFSNA+ YNP + VH A +L F+ +K+ + E+
Sbjct: 175 RYSSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKAFMSWFEQEL 229
>gi|308804515|ref|XP_003079570.1| Protein involved in transcription initiation at TATA-containing
promoters; associates with the basal transcription
factor TFIID; contains two bromodom (ISS) [Ostreococcus
tauri]
gi|116058025|emb|CAL54228.1| Protein involved in transcription initiation at TATA-containing
promoters; associates with the basal transcription
factor TFIID; contains two bromodom (ISS) [Ostreococcus
tauri]
Length = 446
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 83 PFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYF 142
P ++ Q E +D+ + + + +C +L H +F PVDPV+ IPDY
Sbjct: 37 PVTTKRLQREYEIEQDREARR-KEMVRRCREVLNLTKKHRYHKIFLFPVDPVRQGIPDYP 95
Query: 143 SIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
I+ PMDLGTVK +LD Y ++F AD+RL FSN LYN +++ M + ++ F+
Sbjct: 96 QIVKNPMDLGTVKRKLDERKYVGPEDFCADMRLIFSNCALYNGSQSDAGIMGETVHQGFE 155
Query: 203 IKW 205
W
Sbjct: 156 AAW 158
>gi|301109737|ref|XP_002903949.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
gi|262096952|gb|EEY55004.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
Length = 1186
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 114 ILKSLMMHPAG--WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVA 171
IL LM P VFN PVDP+ L++P Y +I+ PMDLGTVK L Y ++FV+
Sbjct: 380 ILLKLMADPRNRHGVFNTPVDPIALELPAYTTIVQHPMDLGTVKRNLAAGEYLELEDFVS 439
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
DVRL F NAM++NP + +H A L N F+
Sbjct: 440 DVRLVFENAMVFNPESHYIHVDAGILLNRFN 470
>gi|365761633|gb|EHN03272.1| Bdf2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 629
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
+ F +PVDP+ L++P+YF II PMDLGT+ L Y D+F+ D+ L F N +
Sbjct: 334 NFPFLQPVDPIALNLPNYFEIIKNPMDLGTISNNLMNWKYKTVDQFINDLNLVFLNCFQF 393
Query: 184 NPPENNVHKMAQELNNLFDIKW 205
NP N VH M ++L LF + W
Sbjct: 394 NPEGNEVHLMGKKLKELFSVHW 415
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDP+ L+IP YF+ + PMDL + +L + Y ++ +D R +N + +N
Sbjct: 150 FLNPVDPIALNIPHYFNYVQTPMDLSLIGKKLQESTYHSVEQVKSDFRTMVNNCLSFNGL 209
Query: 187 ENNVHKMAQELNNLFDIKWKSL 208
E++V MA+ + F+ K ++
Sbjct: 210 ESSVSLMAKRIQIYFERKLSAM 231
>gi|291230216|ref|XP_002735064.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Saccoglossus kowalevskii]
Length = 597
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ I+K L H W F +PVD L + DY II PMDLGTVK +L+ Y+ ++
Sbjct: 154 CNGIIKELYSKKHSGYAWPFYKPVDANLLGLHDYHDIIKYPMDLGTVKRKLETRDYTNAN 213
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+ ADVR F+N YNPP+++V MA++L ++F++K+ +
Sbjct: 214 DIAADVRAIFTNCYKYNPPDHDVVAMARKLQDVFEMKFAKM 254
>gi|344301621|gb|EGW31926.1| hypothetical protein SPAPADRAFT_61027 [Spathaspora passalidarum
NRRL Y-27907]
Length = 330
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
+ F PVD V L+IP+Y ++ +PMDLGT++T+L N Y DEF DVRL F N L+
Sbjct: 9 NFPFLSPVDTVALNIPNYNEVVKEPMDLGTIQTKLANNQYENGDEFEHDVRLVFKNCYLF 68
Query: 184 NPPENNVHKMAQELNNLFDIKW 205
NP +V+ M L +FD KW
Sbjct: 69 NPEGTDVNMMGHRLEAVFDKKW 90
>gi|159164649|pdb|2I8N|A Chain A, Solution Structure Of The Second Bromodomain Of Brd4
Length = 114
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ILK + H A W F +PVD L + DY II PMD+ T+K++L+ Y +
Sbjct: 6 CSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQ 65
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 66 EFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 106
>gi|226530258|ref|NP_001151218.1| bromodomain containing protein [Zea mays]
gi|195645110|gb|ACG42023.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 56/97 (57%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C IL L FN PV+ +L + DY ++I +PMDLGTVK L Y+ D+F
Sbjct: 108 RCGQILSRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYASHDDF 167
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
ADVRLTF+NA+ YNP + VH A L F+ +K
Sbjct: 168 AADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYK 204
>gi|359486529|ref|XP_002276963.2| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 440
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q IL+ + H W F +PVD L + DY+ +I KPMD T+K ++ D Y
Sbjct: 157 LMRQFGTILRQITQHKWAWPFMQPVDVEGLGLHDYYEVIEKPMDFSTIKNKMEAKDGAGY 216
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
E ADVRL F NAM YN +VH MA+ L F EEKW +PK
Sbjct: 217 KNVREICADVRLVFKNAMKYNDERRDVHVMAKTLLGKF-------EEKWLQLLPKV 265
>gi|340505568|gb|EGR31885.1| hypothetical protein IMG5_100340 [Ichthyophthirius multifiliis]
Length = 475
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
IL+ + ++F +PVD VK I DY+ I+ +PMDLGT+K +L+ N+Y EF+ DV
Sbjct: 385 ILQIISKAKGCYLFQQPVDVVKYQIHDYYDIVKRPMDLGTIKNKLNCNVYESCKEFIEDV 444
Query: 174 RLTFSNAMLYNPPENNVHKMAQELN 198
L F N +LYN ++ V K Q LN
Sbjct: 445 ELVFYNCILYNGSDSEVGKFVQILN 469
>gi|259090114|pdb|2WP1|A Chain A, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
gi|259090115|pdb|2WP1|B Chain B, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
Length = 126
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 110 QCSVILKSLMMH---PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
CS ILK ++ P W F PVD L + +Y+ ++ PMDLGT+K ++D Y +
Sbjct: 18 HCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYKDA 77
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
EF ADVRL F N YNPP++ V MA+ L ++F++ + + ++
Sbjct: 78 YEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKIPDE 122
>gi|413919577|gb|AFW59509.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 56/97 (57%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C IL L FN PV+ +L + DY ++I +PMDLGTVK L Y+ D+F
Sbjct: 108 RCGQILSRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYASHDDF 167
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
ADVRLTF+NA+ YNP + VH A L F+ +K
Sbjct: 168 AADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYK 204
>gi|296086052|emb|CBI31493.3| unnamed protein product [Vitis vinifera]
Length = 362
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q IL+ + H W F +PVD L + DY+ +I KPMD T+K ++ D Y
Sbjct: 79 LMRQFGTILRQITQHKWAWPFMQPVDVEGLGLHDYYEVIEKPMDFSTIKNKMEAKDGAGY 138
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
E ADVRL F NAM YN +VH MA+ L F EEKW +PK
Sbjct: 139 KNVREICADVRLVFKNAMKYNDERRDVHVMAKTLLGKF-------EEKWLQLLPKV 187
>gi|308494761|ref|XP_003109569.1| CRE-BET-2 protein [Caenorhabditis remanei]
gi|308245759|gb|EFO89711.1| CRE-BET-2 protein [Caenorhabditis remanei]
Length = 1383
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
VF PVDPVKL I DY +I +PMDL T+K +LD Y+ +EF D+ L N YNP
Sbjct: 727 VFYVPVDPVKLKIVDYLEVIKEPMDLQTIKKKLDYKQYTSGEEFERDMNLMIDNCCTYNP 786
Query: 186 PENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVN 233
+ VH+ A +L LF+ +WK P+ G+ I+S + N
Sbjct: 787 AGSAVHQNALDLKALFESRWKLF--------PRPGVDPIVSDSYIRQN 826
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 66 GKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGW 125
K+ + +E+ E P N Q E P K + + + ++K + H W
Sbjct: 355 AKRPLPTENPWESPRQAPING-IVQPRTEPPPGKPTRHTNRLDYILFTVVKDALKHKHSW 413
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
F PVD L IP+Y + I++PMDL T++ RL Y +D+ + D++ FSN ++NP
Sbjct: 414 PFQAPVDAKSLQIPEYHNTIARPMDLRTIEKRLRNTYYYCADDAIRDIKQMFSNCYMFNP 473
Query: 186 PENNVHKMAQELN 198
PE +V+KMA+ L+
Sbjct: 474 PEYDVYKMAKTLD 486
>gi|356532581|ref|XP_003534850.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 578
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 29 QPCEYGQQQSHVENWRHSSSVAESNQLMMSKPYRSSGGKKMI-ASEHSKERSSILPFNKR 87
+ C Y Q+ E + +S+ E Q+ + Y S+ ++ A + S+E+ I R
Sbjct: 245 EICTYLMQRGVFERVQMCASLEE--QVAEVQKYYSTINDQVNNAKDKSQEKHVIGTKRSR 302
Query: 88 QAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISK 147
Q E K V HQ S I + H W F PVD L + DY+ II K
Sbjct: 303 QGGSSKEANSSNTMK---EVMHQFSTIFHQITQHRWAWPFMDPVDVEGLGLSDYYQIIEK 359
Query: 148 PMDLGTVKTRLDR---NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIK 204
PMD GT+K ++D + Y + +DV L F NAM YN + ++H MA+ L F+ K
Sbjct: 360 PMDFGTIKRKMDAKDGSGYKNVRQIYSDVTLVFKNAMKYNDEKTDIHIMAKTLREKFEKK 419
Query: 205 WKSL 208
W L
Sbjct: 420 WLQL 423
>gi|242077236|ref|XP_002448554.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
gi|241939737|gb|EES12882.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
Length = 458
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 56/97 (57%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C IL L FN PV+ +L + DY ++I +PMDLGTVK L Y+ D+F
Sbjct: 118 RCGQILTRLRKDKRSVWFNAPVEVERLGLHDYHTVIKRPMDLGTVKEGLAAGRYASHDDF 177
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
ADVRLTF+NA+ YNP + VH A L F+ +K
Sbjct: 178 AADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYK 214
>gi|58269688|ref|XP_572000.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57228236|gb|AAW44693.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1711
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 94 EGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGT 153
+ PK +R + ++ L L+ + F +PVDPV+ + PDY ++I KPMDL T
Sbjct: 1158 DAPKAQRKGLSDNDFKAIAIALNKLVADKRSFFFRQPVDPVRDNAPDYLTVIKKPMDLST 1217
Query: 154 VKTRLDRNLYSVSDEFVADVRLTFSNAMLYN-PPENNVHKMAQELNNLFDIKWKSLEEKW 212
++ +LD +Y+ +FV+D+RL +N YN P + V K + LF+ W E
Sbjct: 1218 IRAKLDNGMYTNRQDFVSDIRLIIANCYTYNAAPTSPVRKAGEAFEKLFNTLWAKTENTL 1277
Query: 213 SSE 215
S++
Sbjct: 1278 SAQ 1280
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L +L P+ +F RPVDP+ P Y I PMDLGT+ ++D+ Y +F D+
Sbjct: 1505 LLTTLQKEPSAILFLRPVDPILDGCPTYLDEIKHPMDLGTIGKKIDQKKYKTMGQFARDI 1564
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
L F+N +NPP + +A ++ ++ W
Sbjct: 1565 ELVFANCRQFNPP-GEITALADKVEEVYWRDW 1595
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSII--SKPMDLGTVKTRLDRNLYSVSDEFVA 171
+L + +P F VDPV L IP YF II DLG +K +L++ Y + +
Sbjct: 1614 MLNQALKNPLSEWFRLAVDPVALGIPQYFDIIPPEDARDLGLIKLKLEKGQYQTAKQVDE 1673
Query: 172 DVRLTFSNAMLYN 184
DV L NA ++N
Sbjct: 1674 DVELMLENARVFN 1686
>gi|134113885|ref|XP_774190.1| hypothetical protein CNBG1720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256825|gb|EAL19543.1| hypothetical protein CNBG1720 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1729
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 94 EGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGT 153
+ PK +R + ++ L L+ + F +PVDPV+ + PDY ++I KPMDL T
Sbjct: 1176 DAPKAQRKGLSDNDFKAIAIALNKLVADKRSFFFRQPVDPVRDNAPDYLTVIKKPMDLST 1235
Query: 154 VKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP-PENNVHKMAQELNNLFDIKWKSLEEKW 212
++ +LD +Y+ +FV+D+RL +N YN P + V K + LF+ W E
Sbjct: 1236 IRAKLDNGMYTNRQDFVSDIRLIIANCYTYNATPTSPVRKAGEAFEKLFNTLWAKTENTL 1295
Query: 213 SSE 215
S++
Sbjct: 1296 SAQ 1298
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L +L P+ +F RPVDP+ P Y I PMDLGT+ ++D+ Y +F D+
Sbjct: 1523 LLTTLQKEPSAILFLRPVDPILDGCPTYLDEIKHPMDLGTIGKKIDQKKYKTMGQFARDI 1582
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
L F+N +NPP + +A ++ ++ W
Sbjct: 1583 ELVFANCRQFNPP-GEITALADKVEEVYWRDW 1613
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSII--SKPMDLGTVKTRLDRNLYSVSDEFVA 171
+L + +P F VDPV L IP YF II DLG +K +L++ Y + +
Sbjct: 1632 MLNQALKNPLSEWFRLAVDPVALGIPQYFDIIPPEDARDLGLIKLKLEKGQYQTAKQVDE 1691
Query: 172 DVRLTFSNAMLYN 184
DV L NA ++N
Sbjct: 1692 DVELMLENARVFN 1704
>gi|303287933|ref|XP_003063255.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455087|gb|EEH52391.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 120
Score = 84.3 bits (207), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 53/102 (51%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
V C +L +L H +VF PVDPV L IPDY +I PMDLGTV +L R Y
Sbjct: 16 VLAACEKVLNALKRHKYYFVFEHPVDPVALGIPDYPDVIKDPMDLGTVGDKLARGGYLHP 75
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
EF D RLTF N YN P + H M + F+ W ++
Sbjct: 76 REFEYDCRLTFQNCKTYNSPGTDAHSMGDAMLKEFEKNWLNM 117
>gi|194763657|ref|XP_001963949.1| GF20989 [Drosophila ananassae]
gi|190618874|gb|EDV34398.1| GF20989 [Drosophila ananassae]
Length = 907
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSIISKPMDL 151
P +RP + T+Q ++K++M H W F +PVD KL++PDY II PMD+
Sbjct: 27 PPAERPGRN---TNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKHPMDM 83
Query: 152 GTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
GT+K RL+ N Y + E + D F+N +YN P +V MAQ L +F
Sbjct: 84 GTIKKRLENNYYWSAKEAIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|389608036|dbj|BAM17618.1| putative RING3 protein [Oryza sativa Japonica Group]
Length = 456
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 60/106 (56%)
Query: 102 KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
K+ + +C IL L FN PV+ +L + DY ++I PMDLGTV+ L
Sbjct: 115 KLRAAMRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAG 174
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
YS D+F ADVRLTFSNA+ YNP + VH A +L F+ +K+
Sbjct: 175 RYSSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKA 220
>gi|440482802|gb|ELQ63261.1| hypothetical protein OOW_P131scaffold00998g43 [Magnaporthe oryzae
P131]
Length = 539
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 111 CSVILKSLMMHPAGWV-----FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
CS +L ++ P W F PVDP++ ++PDYF+ I++PMDL T+K ++D+ LY
Sbjct: 323 CSDLLTRMVSGPGFWTRIVGPFKEPVDPLRDEVPDYFTKINRPMDLRTMKNKMDQRLYKD 382
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKIL 225
+EFVAD+R F+N Y ++ + + L F+ K+ S+ W S++ +++
Sbjct: 383 EEEFVADMRQIFTNCYTYWTKKDPMWAACERLEKNFEDKYGSM-NAWISKMSGC---EVI 438
Query: 226 SGKMMEVNDTRQNCPKTP 243
SG +M D Q CP P
Sbjct: 439 SG-VMPWEDFVQPCPDGP 455
>gi|440468385|gb|ELQ37550.1| hypothetical protein OOU_Y34scaffold00590g64 [Magnaporthe oryzae
Y34]
Length = 539
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 111 CSVILKSLMMHPAGWV-----FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
CS +L ++ P W F PVDP++ ++PDYF+ I++PMDL T+K ++D+ LY
Sbjct: 323 CSDLLTRMVSGPGFWTRIVGPFKEPVDPLRDEVPDYFTKINRPMDLRTMKNKMDQRLYKD 382
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKIL 225
+EFVAD+R F+N Y ++ + + L F+ K+ S+ W S++ +++
Sbjct: 383 EEEFVADMRQIFTNCYTYWTKKDPMWAACERLEKNFEDKYGSM-NAWISKMSGC---EVI 438
Query: 226 SGKMMEVNDTRQNCPKTP 243
SG +M D Q CP P
Sbjct: 439 SG-VMPWEDFVQPCPDGP 455
>gi|328770698|gb|EGF80739.1| hypothetical protein BATDEDRAFT_88064 [Batrachochytrium
dendrobatidis JAM81]
Length = 897
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 111 CSVILKSL---MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS I + L P F PVDP+ L IP Y SII++PMDL T++ +LD Y +
Sbjct: 467 CSYIQRELSKKHHSPYNLPFLVPVDPIALGIPHYRSIITRPMDLSTMRKKLDNGDYEHAS 526
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF AD+RL +N +NPP +V+ + + L F+ KW
Sbjct: 527 EFEADMRLMLNNCYTFNPPGTDVYNLGKRLEGAFNNKW 564
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
+F PVDP+ L+IP Y ++I +PMD+ T+ +L YS AD L F+N +N
Sbjct: 327 IFLVPVDPIALNIPTYSTVIKQPMDISTIDKKLQNKGYSDVATIKADFELMFNNCYTFNG 386
Query: 186 PENNVHKMAQELNNLF 201
++ V MA+ L +
Sbjct: 387 ADSQVSVMAKNLQAWY 402
>gi|68131533|dbj|BAE02656.1| CREB binding protein [Lymnaea stagnalis]
Length = 2275
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%)
Query: 122 PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAM 181
P F +PVDPV L IPDYF I+ KPMDL T++ +LD LY E+V DV L F NA
Sbjct: 997 PESLPFRQPVDPVILHIPDYFEIVKKPMDLSTIRRKLDSGLYKDPWEYVDDVWLMFDNAW 1056
Query: 182 LYNPPENNVHKMAQELNNLFDIKWKSL 208
LYN + V+K A +L +F+ + S+
Sbjct: 1057 LYNRKTSRVYKYASKLAEVFESEIDSV 1083
>gi|297279234|ref|XP_001100884.2| PREDICTED: bromodomain testis-specific protein-like [Macaca
mulatta]
Length = 983
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 110 QCSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D Y +
Sbjct: 311 HCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYKDA 370
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 371 YKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 412
>gi|426330336|ref|XP_004026173.1| PREDICTED: bromodomain testis-specific protein [Gorilla gorilla
gorilla]
Length = 883
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 80 SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM---HPAGWVFNRPVDPVKL 136
++LP +++Q V K K+ + H CS ILK ++ W F PVD L
Sbjct: 189 NVLPDSQQQYNVV------KTVKVTEQLRH-CSEILKEMLAKKHFSYAWPFYNPVDINAL 241
Query: 137 DIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQE 196
+ +Y+ I+ PMDLGT+K ++D Y + +F ADVRL F N YNPP++ V MA+
Sbjct: 242 GLHNYYDIVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARM 301
Query: 197 LNNLFDIKWKSL 208
L ++F+ + +
Sbjct: 302 LQDVFETHFSKI 313
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 140 DYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNN 199
DY++II PMDL T+K RL+ Y + E + D FSN LYN P +++ MAQ L
Sbjct: 2 DYYTIIKNPMDLNTIKKRLENKYYGKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEK 61
Query: 200 LF 201
LF
Sbjct: 62 LF 63
>gi|320170046|gb|EFW46945.1| E1A binding protein p300 [Capsaspora owczarzaki ATCC 30864]
Length = 2072
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR----NLYSVSDEFVADVRLTFSNAML 182
F PVDPV L I DY ++I +PMD T++TRLDR + Y FV D+RL F+NA+
Sbjct: 908 FMVPVDPVALGILDYLTVIKRPMDFSTIRTRLDRPTDKHFYRDPLGFVDDMRLVFTNALT 967
Query: 183 YNPPENNVHKMAQELNNLFD 202
YN + VHKMA +L++LF+
Sbjct: 968 YNKKNSRVHKMATKLSDLFE 987
>gi|406700376|gb|EKD03547.1| hypothetical protein A1Q2_02130 [Trichosporon asahii var. asahii CBS
8904]
Length = 1847
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
+ +L+ L+ F PVDP++ PDY SI++ PMDL TV+ ++D LY+ +F
Sbjct: 1162 ITYVLQKLLADKRSTFFRMPVDPIRDHAPDYLSIVTNPMDLSTVQAKMDNGLYTSRKDFE 1221
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
D+RL SN LYNPP + V K + F+ W E
Sbjct: 1222 NDIRLLISNCHLYNPPGSGVRKAGEAFEKFFNGLWNKTE 1260
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+ ++ +LM P F RPVDPV+ P Y I++P D GT++ ++ YS +
Sbjct: 1637 RAKTLINALMKEPNAIFFLRPVDPVRDGCPTYLDEIAEPSDFGTIQKNIELKKYSTMGQL 1696
Query: 170 VADVRLTFSNAMLYNPP 186
+ L FSN +NPP
Sbjct: 1697 ARAIELVFSNCRQFNPP 1713
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISK--PMDLGTVKTRLDRNLYSVSDE 168
+ ++ P +F PVDP+ L IP YF II + DL +K +L+R Y+ + +
Sbjct: 1747 LTAVINRSFRDPLSQLFREPVDPIALGIPQYFDIIPQEDARDLSLIKQKLERGTYTTARQ 1806
Query: 169 FVADVRLTFSNAMLYN 184
D L N ++N
Sbjct: 1807 VDDDFELMLENCRVFN 1822
>gi|332221880|ref|XP_003260091.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Nomascus
leucogenys]
gi|441637320|ref|XP_004090056.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 899
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 10/133 (7%)
Query: 79 SSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM---HPAGWVFNRPVDPVK 135
+++LP +++Q V K K+ + H CS ILK ++ W F PVD
Sbjct: 205 TNVLPDSQQQYNVV------KSVKVTEQLRH-CSEILKEMLAKKHFSYAWPFYNPVDVNA 257
Query: 136 LDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQ 195
L + +Y+ I+ PMDLGT+K ++D Y + +F ADVRL F N YNPP++ V MA+
Sbjct: 258 LGLHNYYDIVKNPMDLGTIKEKMDNQEYEDAYKFAADVRLMFMNCYKYNPPDHEVVTMAR 317
Query: 196 ELNNLFDIKWKSL 208
L ++F+ + +
Sbjct: 318 MLQDVFETHFSKI 330
>gi|401882976|gb|EJT47215.1| hypothetical protein A1Q1_04073 [Trichosporon asahii var. asahii CBS
2479]
Length = 1779
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
+ +L+ L+ F PVDP++ PDY SI++ PMDL TV+ ++D LY+ +F
Sbjct: 1151 ITYVLQKLLADKRSTFFRMPVDPIRDHAPDYLSIVTNPMDLSTVQAKMDNGLYTSRKDFE 1210
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
D+RL SN LYNPP + V K + F+ W E
Sbjct: 1211 NDIRLLISNCHLYNPPGSGVRKAGEAFEKFFNGLWNKTE 1249
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+ ++ +LM P F RPVDPV+ P Y I++P D GT++ ++ YS +
Sbjct: 1626 RAKTLINALMKEPNAIFFLRPVDPVRDGCPTYLDEIAEPSDFGTIQKNIELKKYSTMGQL 1685
Query: 170 VADVRLTFSNAMLYNPP 186
+ L FSN +NPP
Sbjct: 1686 ARAIELVFSNCRQFNPP 1702
>gi|169624656|ref|XP_001805733.1| hypothetical protein SNOG_15588 [Phaeosphaeria nodorum SN15]
gi|111055843|gb|EAT76963.1| hypothetical protein SNOG_15588 [Phaeosphaeria nodorum SN15]
Length = 906
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +L L+ + F PVDPV L+IP Y II KPMD GT++ L +Y +
Sbjct: 548 CESVLAELLKPKYAAVSYPFVSPVDPVALNIPSYLKIIKKPMDFGTIEKNLKAGMYQSAK 607
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
+F AD L F N +NP + V+KM +L ++F+ W+ + ++ P+A
Sbjct: 608 DFHADAHLVFQNCYKFNPEGDAVNKMGHDLEDIFEKLWREKADWLAAHAPEA 659
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
F PVD + L+IP Y ++ KPMDL T++ +L N Y+ EF+AD+ N+ L+N
Sbjct: 361 AFKDPVDHIALNIPTYPELVKKPMDLSTMENKLKENKYTYVREFMADLDQMIENSELFN- 419
Query: 186 PENNVHKMAQELNNL 200
N H + Q NL
Sbjct: 420 --NKQHPVTQAGYNL 432
>gi|410033225|ref|XP_003949509.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 797
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 196 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDN 255
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 256 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 303
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
MDL T+K RL+ Y + E + D FSN LYN P +++ MAQ L LF
Sbjct: 1 MDLNTIKKRLENKYYMKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 53
>gi|323447957|gb|EGB03862.1| hypothetical protein AURANDRAFT_55416 [Aureococcus anophagefferens]
Length = 628
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%)
Query: 93 IEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLG 152
+ G R + D V +LK ++ P+ + F PVD L + DY ++ PMDLG
Sbjct: 299 LFGSHSLRSQNDVSVYDHFVNLLKHVVQQPSSYPFMAPVDAEALGLADYHDVVKAPMDLG 358
Query: 153 TVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
TV+ RL Y+ + V DVRLTF+NA YNPP + VH+ A L +F+ K ++L ++
Sbjct: 359 TVERRLGGGSYANPQKLVDDVRLTFANAQKYNPPAHPVHEAATHLGCVFEKKLQNLLQRL 418
Query: 213 SS 214
S
Sbjct: 419 KS 420
>gi|170086133|ref|XP_001874290.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651842|gb|EDR16082.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 573
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 66/122 (54%), Gaps = 15/122 (12%)
Query: 97 KDKRPKMDRGVTHQ---CSVILKSL-------MMHPAGWVFNRPVDPVKLDIPDYFSIIS 146
K KR K D G Q C+ IL+ L + HP F PVD VKLDIP Y ++
Sbjct: 211 KGKRVK-DDGTAEQLKFCAKILQDLHRKQHYGIAHP----FYEPVDWVKLDIPSYPKVVK 265
Query: 147 KPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
KPMDL T++ +L+ YS + +F D +L N L+NP V++ EL LFD KWK
Sbjct: 266 KPMDLSTIRKKLENFEYSTAQKFFDDFKLMIRNCFLFNPAGTLVNQAGIELQRLFDEKWK 325
Query: 207 SL 208
SL
Sbjct: 326 SL 327
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL--------DRNL 162
C ++SL F RPVD + L+IP Y SII PMD T++ +L D NL
Sbjct: 30 CQSTIRSLKKQKDAAPFLRPVDVIGLNIPHYPSIIKTPMDFSTIERKLNSSNPAKPDLNL 89
Query: 163 ----YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y +DEF+ DVRL F N + +N P++ + M + + +FD + K +
Sbjct: 90 QNPRYHNADEFIFDVRLIFQNCITFNGPDHAIAAMGKRVEAVFDKQVKQM 139
>gi|429242322|ref|NP_593620.3| bromodomain protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|391358177|sp|Q9HGP4.3|YK82_SCHPO RecName: Full=Bromodomain-containing protein C631.02
gi|347834104|emb|CAC05484.3| bromodomain protein (predicted) [Schizosaccharomyces pombe]
Length = 727
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 71 ASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRP 130
A+ SKE SS P ++ +E E KD+ P M + +L+ L F P
Sbjct: 202 AAGSSKEHSS--PHDETVKKE--ENDKDQYPPMTKEQHKYIHAMLRQLRRGRDSIPFRAP 257
Query: 131 VDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNV 190
VDPVK +IPDY +II P+DLGT++ + +YS + F+ D+ L FSN LYN E+ V
Sbjct: 258 VDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFLYNGTESPV 317
Query: 191 HKMAQELNNLFDIKWKSLEEKWSSEVPKAG 220
M + L F+ + K L + + + G
Sbjct: 318 GVMGKNLQATFERQLKQLPSAYVTSYSRPG 347
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +LK L+ H A + F +PV+P PDYF +I PMDLGT++ +L+ N Y+
Sbjct: 397 CQSVLKELLKKQHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNEYASMK 456
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
F AD+ L F N +N VH M ++L ++F W
Sbjct: 457 AFEADMVLMFKNCYKFNSAGTPVHLMGKKLESIFQKLW 494
>gi|195063000|ref|XP_001996295.1| GH22416 [Drosophila grimshawi]
gi|193899790|gb|EDV98656.1| GH22416 [Drosophila grimshawi]
Length = 291
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 92 VIEGPKDKRPKMDRGVTH--QCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSII 145
V++ P +R +DR H Q ILK++M H + F +PV+ KL +PDY II
Sbjct: 10 VVQPPTVQR--LDRPGRHTNQLEYILKTVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDII 67
Query: 146 SKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+PMDL T+K RL N Y + E AD+ L F+N LYN P +V MA+ L ++F
Sbjct: 68 KQPMDLATIKKRLANNYYWSATEAAADINLIFTNCSLYNKPTEDVIIMAKVLESVF 123
>gi|25152243|ref|NP_509770.2| Protein BET-2, isoform a [Caenorhabditis elegans]
gi|22265870|emb|CAA93473.3| Protein BET-2, isoform a [Caenorhabditis elegans]
Length = 1209
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
VF PVDP+KL I DY +I+ PMDL T+K +LD Y+ +EFV D+ L N YNP
Sbjct: 578 VFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAEPEEFVHDINLMVDNCCKYNP 637
Query: 186 PENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVN 233
+ H A EL + F+ +WK P+ G+ I++ + N
Sbjct: 638 KGSPAHSNALELRSFFEQRWKLF--------PRPGVDPIIADSYINQN 677
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYS-VSDEFVA 171
++K + H W F PVD +KL+IP+Y +I++ PMDL T++ RL RNLY +++ +
Sbjct: 293 TVVKDALKHKHSWPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRL-RNLYYWCAEDAIK 351
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQEL 197
D+ F N +NPPE +V+KMA+ L
Sbjct: 352 DINQVFINCYSFNPPEYDVYKMAKTL 377
>gi|242034457|ref|XP_002464623.1| hypothetical protein SORBIDRAFT_01g021950 [Sorghum bicolor]
gi|241918477|gb|EER91621.1| hypothetical protein SORBIDRAFT_01g021950 [Sorghum bicolor]
Length = 515
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 73/144 (50%), Gaps = 20/144 (13%)
Query: 74 HSKERSSILP-FNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVD 132
HSK RS+ P +N + Q + + +LK+L HP W F PVD
Sbjct: 389 HSKSRSAFSPDYNTYRQQ----------------LANLMRTLLKNLSEHPDAWPFKEPVD 432
Query: 133 PVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDE-FVADVRLTFSNAMLYNPPENNVH 191
D+PDY+ II P+DL T+ R+D Y V+ E FVAD++ FSNA YN P+ +
Sbjct: 433 --SRDVPDYYDIIKDPIDLKTMLRRVDSEQYYVTLEMFVADMKRMFSNARTYNSPDTIYY 490
Query: 192 KMAQELNNLFDIKWKSLEEKWSSE 215
K A L N F K SL + S++
Sbjct: 491 KCATRLENFFSTKIASLVSQASTK 514
>gi|384499244|gb|EIE89735.1| hypothetical protein RO3G_14446 [Rhizopus delemar RA 99-880]
Length = 570
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 115 LKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVR 174
L LM HP F +PVDPV +IPDYF II PMDL T++T+L N Y +EF+ADV
Sbjct: 44 LTKLMKHPCAGPFLQPVDPVFFNIPDYFDIIKHPMDLSTIQTKL--NNYQSKEEFIADVE 101
Query: 175 LTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILS 226
L N LYN + V A+EL F K L +K SE + + +LS
Sbjct: 102 LMLDNCYLYNNATDPVCDQARELEKAFK---KHLAKKTVSEKQPSTVTTLLS 150
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%)
Query: 125 WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYN 184
W F RPVD DY+ II PMD+ T++ + Y+ D+F D +L FSN YN
Sbjct: 174 WPFERPVDAAAWGATDYYDIIQHPMDMSTIENKFKNAEYTNEDQFYDDYKLMFSNCYKYN 233
Query: 185 PPENNVHKMAQELNNLFDIKWKSLEEK 211
PP + VH + ++ FD W + +K
Sbjct: 234 PPHHEVHLLGKKFEEDFDKHWNKIHDK 260
>gi|224109720|ref|XP_002315289.1| global transcription factor group [Populus trichocarpa]
gi|222864329|gb|EEF01460.1| global transcription factor group [Populus trichocarpa]
Length = 318
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q IL+ + H W F +PVD L + DY+ +I KPMD T+K ++ D Y
Sbjct: 87 LMRQFGTILRQITQHKWAWPFMQPVDVKGLRLHDYYEVIDKPMDFSTIKNQMEAKDGTGY 146
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
E ADVRL F NAM YN ++VH MA+ L F EEKW +PK
Sbjct: 147 KNVREISADVRLVFKNAMKYNDERSDVHVMAKTLLGKF-------EEKWLQLLPKV 195
>gi|255089248|ref|XP_002506546.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226521818|gb|ACO67804.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 208
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY--SVSDEFVA 171
++ +L H ++F +PVDPV L+IPDYF ++ PMDLGTV ++ Y V+D F
Sbjct: 88 VINALQRHRFYFIFAQPVDPVALNIPDYFDVVKTPMDLGTVANKVRNGAYKGDVTD-FED 146
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
D RL FSN YNPP ++ M + FD KW L
Sbjct: 147 DARLVFSNCRAYNPPGSDAATMGDAVEKEFDKKWIEL 183
>gi|402855238|ref|XP_003892238.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Papio
anubis]
gi|402855240|ref|XP_003892239.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Papio
anubis]
Length = 899
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 223 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDN 282
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 283 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|451856062|gb|EMD69353.1| hypothetical protein COCSADRAFT_166346 [Cochliobolus sativus
ND90Pr]
Length = 912
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ++ LM + F PVDPV L+IP Y II KPMD GT++ L +Y +
Sbjct: 548 CESVITELMKPKYSTLTYPFTSPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQSAK 607
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
+F AD +L F N +NP + V++M +L LF+ WK
Sbjct: 608 DFYADAQLVFQNCYKFNPEGDAVNQMGHKLEELFESLWK 646
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
F PVDPV L+IP Y+ ++ PMDL T++ +L Y +F+AD+ +N+ L+N
Sbjct: 361 AFKDPVDPVALNIPTYYDVVKHPMDLTTMEAKLKEKKYKYVRDFMADLDQMITNSELFN- 419
Query: 186 PENNVHKMAQELNNL 200
N H + Q NL
Sbjct: 420 --NKQHPVTQAGYNL 432
>gi|338797768|ref|NP_001229739.1| bromodomain testis-specific protein isoform d [Homo sapiens]
gi|119593515|gb|EAW73109.1| bromodomain, testis-specific, isoform CRA_b [Homo sapiens]
Length = 874
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 80 SILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMM---HPAGWVFNRPVDPVKL 136
++LP +++Q V K K+ + H CS ILK ++ W F PVD L
Sbjct: 179 NVLPDSQQQYNVV------KTVKVTEQLRH-CSEILKEMLAKKHFSYAWPFYNPVDVNAL 231
Query: 137 DIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQE 196
+ +Y+ ++ PMDLGT+K ++D Y + +F ADVRL F N YNPP++ V MA+
Sbjct: 232 GLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARM 291
Query: 197 LNNLFDIKWKSL 208
L ++F+ + +
Sbjct: 292 LQDVFETHFSKI 303
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
MDL T+K RL+ Y+ + E + D FSN LYN P +++ MAQ L LF
Sbjct: 1 MDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 53
>gi|320166235|gb|EFW43134.1| hypothetical protein CAOG_08266 [Capsaspora owczarzaki ATCC 30864]
Length = 1162
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDP+K +Y II PMD GT++ R + Y+ + +F DVRL FSN +LYNPP
Sbjct: 547 FMEPVDPIKHHALNYHEIIKNPMDFGTIQRRFRQKYYTNALDFADDVRLVFSNCLLYNPP 606
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEK 211
++ V MA++L+ +F+ ++ SL ++
Sbjct: 607 DHFVADMARKLSAIFETRFLSLPQQ 631
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 123 AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
A W F++PVD KL P Y +I PMD T++ R++ Y ++ D+ L FSN
Sbjct: 390 AKW-FHKPVDLNKL--PHYREVIETPMDFSTIRARINSGYYPDAEACRKDIELVFSNCFK 446
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
YN P +NV +++ ++ K LEEK + +V
Sbjct: 447 YNAPGDNVTVAGEQVKAHYE---KVLEEKKTPDV 477
>gi|189517009|ref|XP_001920272.1| PREDICTED: nucleosome-remodeling factor subunit BPTF [Danio rerio]
Length = 2758
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
IL+SL H W F PVDP D PDY+ II +PMDL T++ R+ + YS EFVAD+
Sbjct: 2651 ILRSLQSHKMAWPFLEPVDPN--DAPDYYGIIKEPMDLSTMEERIQKRFYSKLTEFVADM 2708
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K+
Sbjct: 2709 TKIFDNCRYYNPSDSPFYQCAEFLESFFVQKLKAF 2743
>gi|384493749|gb|EIE84240.1| hypothetical protein RO3G_08950 [Rhizopus delemar RA 99-880]
Length = 435
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 89 AQEVIEGPKDKRPK-MDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISK 147
A E E PKD+ P+ M + I K L P F +PVDPV +IPDYF II
Sbjct: 15 AAEESEPPKDRAPEPMSPQDKRLVTGIFKKLWNCPFATPFLQPVDPVYFNIPDYFDIIKH 74
Query: 148 PMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
PMDL T++ +LD Y +EF+ADV L +N LYN P + V A+E +F
Sbjct: 75 PMDLSTIQKKLDD--YHSKEEFIADVELMLNNCYLYNNPTDPVCDTAREFEKMF 126
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 125 WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYN 184
W F RPVD DY+ II +PMD+ T++ + ++ Y+ DEF D +L F N YN
Sbjct: 175 WPFERPVDAAAWGAADYYDIIKQPMDMATIEEKWKQSKYANEDEFYNDYKLIFENCYKYN 234
Query: 185 PPENNVHKMAQELNNLFDIKWKSL 208
PP + VH + ++ FD W +
Sbjct: 235 PPHHEVHLLGKKFEAAFDKYWNKI 258
>gi|397473969|ref|XP_003808466.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
paniscus]
gi|397473971|ref|XP_003808467.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Pan
paniscus]
Length = 901
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 223 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDN 282
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 283 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|356565711|ref|XP_003551081.1| PREDICTED: uncharacterized protein LOC100797746 [Glycine max]
Length = 738
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 76 KERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVK 135
K++ +P K+Q Q+ +M + + Q IL+ + H W F +PVD
Sbjct: 439 KDKEKHVPSIKKQQQDASRREAAASKRM-QDLMRQFGTILRQITQHKWAWPFMQPVDIEG 497
Query: 136 LDIPDYFSIISKPMDLGTVKTRL---DRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHK 192
L + DY+ +I KPMD T+K ++ D Y E ADVRL F NAM YN ++VH
Sbjct: 498 LGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKHVREICADVRLVFKNAMKYNDERSDVHV 557
Query: 193 MAQELNNLFDIKWKSL 208
MA+ L + F+ KW L
Sbjct: 558 MAKTLLSKFEEKWLQL 573
>gi|452003453|gb|EMD95910.1| hypothetical protein COCHEDRAFT_1210171 [Cochliobolus
heterostrophus C5]
Length = 912
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C ++ LM + F PVDPV L+IP Y II KPMD GT++ L +Y +
Sbjct: 548 CESVITELMKPKYSTLTYPFTSPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQSAK 607
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
+F AD +L F N +NP + V++M +L LF+ WK
Sbjct: 608 DFYADAQLVFQNCYKFNPEGDAVNQMGHKLEELFESLWK 646
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
F PVDPV L+IP Y+ ++ PMDL T++ +L Y +F+AD+ +N+ L+N
Sbjct: 361 AFKDPVDPVALNIPTYYDVVKHPMDLTTMEAKLKEKKYKYVRDFMADLDQMITNSELFN- 419
Query: 186 PENNVHKMAQELNNL 200
N H + Q NL
Sbjct: 420 --NKQHPVTQAGYNL 432
>gi|55296460|dbj|BAD68656.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
gi|55297001|dbj|BAD68476.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
Length = 360
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q I++ + H F +PVD V L + DY+ II+KPMD T++ ++ D N Y
Sbjct: 92 LMRQFGTIVRQITSHEWAEPFLKPVDVVGLQLDDYYKIITKPMDFSTIQKKMEGKDDNKY 151
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+ E +DVRL F+NAM YN ++VH MA+ L F+ KW L
Sbjct: 152 NNVREIYSDVRLIFANAMKYNDERHDVHIMAKSLLEKFEEKWLQL 196
>gi|358055177|dbj|GAA98946.1| hypothetical protein E5Q_05634 [Mixia osmundae IAM 14324]
Length = 750
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 111 CSVILKSLMMHPAG---WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C I++ + H + F PVD L+IPDY +++ PMDLGT+K RLD Y+ +
Sbjct: 438 CKDIIRDVQKHRYSEFTYPFLAPVDWQALNIPDYPNVVQHPMDLGTMKRRLDAGYYNHAS 497
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
EF AD RL N +NP E VH+M ++L F+ +W+
Sbjct: 498 EFEADFRLVIENCYKFNPVETPVHQMGRKLEAFFENRWR 536
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C +++L + F PVDP+ L IP YF+ I PMDL TV+ L N Y+ +EF
Sbjct: 223 CLATVRNLKRNREAPAFCNPVDPIVLGIPAYFAYIRNPMDLSTVEKHLIANEYASVEEFR 282
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
++V+L F N +N E+ + MA+ L F+
Sbjct: 283 SEVKLVFDNCCAFNREESPIGLMARRLEGAFN 314
>gi|357472985|ref|XP_003606777.1| Global transcription factor group [Medicago truncatula]
gi|355507832|gb|AES88974.1| Global transcription factor group [Medicago truncatula]
Length = 332
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 103 MDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKP--MDLGTVKTRLDR 160
MDR QC V LK LM++P G F + +L Y IS P M+ T+K +L++
Sbjct: 55 MDRFKKQQCFVTLKRLMLNPDGEDFKDSMASKRL-ARCYSDDISGPALMEFETIKLKLEK 113
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
LY +D+F +DVR+ F NA + + ++A +L+ LF++KWKSLEE+W++E
Sbjct: 114 GLYLTTDQFASDVRIIFCNANKLLHMSHKIQRIAMKLSELFEMKWKSLEERWAAE 168
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 18/98 (18%)
Query: 500 QREKEREAARVALQKMERTVEIEHNLEILKELEMLSGCCLSPHLLNGSEAQKRAFKEAHF 559
+R+K+REAA++ +Q ++RT I+ NL ELE L G + ++ +
Sbjct: 247 ERKKQREAAKLMIQSIKRTAFIDDNLLSYNELENLCG---------------HSLQDCNK 291
Query: 560 KNPLER-IGLFMKSDYL-VEDEDEEILNLDGDGEEGEI 595
NPL+ +GL +K + + V D +EE L+ D E+GEI
Sbjct: 292 LNPLKTFVGLVLKDEIMGVNDLNEEKF-LNRDWEDGEI 328
>gi|17568247|ref|NP_509771.1| Protein BET-2, isoform b [Caenorhabditis elegans]
gi|3877722|emb|CAA93475.1| Protein BET-2, isoform b [Caenorhabditis elegans]
Length = 1087
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
VF PVDP+KL I DY +I+ PMDL T+K +LD Y+ +EFV D+ L N YNP
Sbjct: 578 VFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAEPEEFVHDINLMVDNCCKYNP 637
Query: 186 PENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVN 233
+ H A EL + F+ +WK P+ G+ I++ + N
Sbjct: 638 KGSPAHSNALELRSFFEQRWKLF--------PRPGVDPIIADSYINQN 677
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYS-VSDEFVA 171
++K + H W F PVD +KL+IP+Y +I++ PMDL T++ RL RNLY +++ +
Sbjct: 293 TVVKDALKHKHSWPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRL-RNLYYWCAEDAIK 351
Query: 172 DVRLTFSNAMLYNPPENNVHKMAQELNNLFD--IKWKSLEEK 211
D+ F N +N ++++ M + + + ++W EEK
Sbjct: 352 DLNTLFDNCKKFNDRNDDIYIMCENIEGVVQRGLEWMPSEEK 393
>gi|413917010|gb|AFW56942.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 487
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C+ IL L FN PVD L + DY +II PMDLGTVK L Y + F
Sbjct: 143 RCADILTRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSHEAF 202
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
DVRLTF+NA+ YNPP+++VH+ A +L F+ +K
Sbjct: 203 AGDVRLTFNNALRYNPPDHHVHRYAGDLLATFEGMYK 239
>gi|307103867|gb|EFN52124.1| hypothetical protein CHLNCDRAFT_27193 [Chlorella variabilis]
Length = 88
Score = 83.2 bits (204), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 125 WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYN 184
W FN PVD + PDY +S+PMD GT+K R+D LY DEF++DVRL F NA LYN
Sbjct: 2 WPFNAPVDLRQY--PDYAETVSRPMDFGTIKRRIDVGLYRHPDEFLSDVRLVFDNARLYN 59
Query: 185 PPENNVHKMAQEL 197
P ++VH MA L
Sbjct: 60 KPGSDVHVMANTL 72
>gi|358055176|dbj|GAA98945.1| hypothetical protein E5Q_05633 [Mixia osmundae IAM 14324]
Length = 754
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 111 CSVILKSLMMHPAG---WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C I++ + H + F PVD L+IPDY +++ PMDLGT+K RLD Y+ +
Sbjct: 442 CKDIIRDVQKHRYSEFTYPFLAPVDWQALNIPDYPNVVQHPMDLGTMKRRLDAGYYNHAS 501
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
EF AD RL N +NP E VH+M ++L F+ +W+
Sbjct: 502 EFEADFRLVIENCYKFNPVETPVHQMGRKLEAFFENRWR 540
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C +++L + F PVDP+ L IP YF+ I PMDL TV+ L N Y+ +EF
Sbjct: 227 CLATVRNLKRNREAPAFCNPVDPIVLGIPAYFAYIRNPMDLSTVEKHLIANEYASVEEFR 286
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
++V+L F N +N E+ + MA+ L F+
Sbjct: 287 SEVKLVFDNCCAFNREESPIGLMARRLEGAFN 318
>gi|332809506|ref|XP_003339041.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
gi|332809508|ref|XP_003308259.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
troglodytes]
Length = 824
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ I+ PMDLGT+K ++D
Sbjct: 223 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDN 282
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 283 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|413917011|gb|AFW56943.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 493
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C+ IL L FN PVD L + DY +II PMDLGTVK L Y + F
Sbjct: 143 RCADILTRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSHEAF 202
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
DVRLTF+NA+ YNPP+++VH+ A +L F+ +K
Sbjct: 203 AGDVRLTFNNALRYNPPDHHVHRYAGDLLATFEGMYK 239
>gi|340501604|gb|EGR28366.1| hypothetical protein IMG5_177130 [Ichthyophthirius multifiliis]
Length = 398
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 104 DRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
+R QC+ ++++L H W F PV+ K D+PDY+ II+ P+D+ ++ RL N Y
Sbjct: 274 ERSFNLQCANVIENLKRHKQSWPFTDPVN--KDDVPDYYDIITDPIDIKLIERRLQNNQY 331
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQEL 197
D+F+ D+R F+NA LYN P+ +K A+EL
Sbjct: 332 LDKDQFIKDIRKIFANAKLYNQPDTVYYKAAKEL 365
>gi|1916930|gb|AAB53050.1| CREB-binding protein homolog [Drosophila melanogaster]
Length = 3190
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDP L IPDYF I+ KPMDLGT++T + YS E+V DV L F NA LYNP
Sbjct: 1723 FRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNPK 1782
Query: 187 ENNVHKMAQELNNLFD 202
+ V++ +L+ +F+
Sbjct: 1783 TSRVYRYCTKLSEVFE 1798
>gi|134105292|pdb|2OO1|A Chain A, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105293|pdb|2OO1|B Chain B, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105294|pdb|2OO1|C Chain C, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105295|pdb|2OO1|D Chain D, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|340708300|pdb|3S92|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd3
In Complex With The Inhibitor Jq1
Length = 113
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 12 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 71
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 72 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 112
>gi|125553971|gb|EAY99576.1| hypothetical protein OsI_21551 [Oryza sativa Indica Group]
gi|125595985|gb|EAZ35765.1| hypothetical protein OsJ_20055 [Oryza sativa Japonica Group]
Length = 344
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q I++ + H F +PVD V L + DY+ II+KPMD T++ ++ D N Y
Sbjct: 76 LMRQFGTIVRQITSHEWAEPFLKPVDVVGLQLDDYYKIITKPMDFSTIQKKMEGKDDNKY 135
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+ E +DVRL F+NAM YN ++VH MA+ L F+ KW L
Sbjct: 136 NNVREIYSDVRLIFANAMKYNDERHDVHIMAKSLLEKFEEKWLQL 180
>gi|390604188|gb|EIN13579.1| Bromodomain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 557
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 12/110 (10%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL--------DRN- 161
C +++SL F RPVDPV L+IP Y SII PMDL TV+ +L D N
Sbjct: 9 CLSVVRSLKKMKDSVPFVRPVDPVALNIPHYPSIIKNPMDLSTVERKLGSSNPAKPDPNP 68
Query: 162 ---LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y DEF+ADVRL FSNA+L+N P++ V M + + ++FD + + +
Sbjct: 69 SNPRYRNVDEFIADVRLIFSNALLFNGPDHAVTLMGKRVQDVFDKQLRQM 118
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVD V L+IPDY I+ KPMD+ T++ +LD + Y + +F D +L N +NP
Sbjct: 226 FYDPVDWVALNIPDYPKIVKKPMDMSTMRKKLDNHEYPNAQKFYDDFKLMIRNCFSFNPA 285
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
V++ +L LFD KWKSL + ++
Sbjct: 286 GTPVNQAGIDLQRLFDDKWKSLPRRQETQ 314
>gi|443920353|gb|ELU40290.1| transcription initiation factor TFIID subunit 2 [Rhizoctonia solani
AG-1 IA]
Length = 1574
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 88 QAQEVIEGPKDKRPK------MDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDY 141
QA + PK +P M++ C +L +L +P VF PVDPV+ + P+Y
Sbjct: 1371 QASIPLPRPKKVKPAAPVHQGMNKTTHAHCKAVLNALHRNPHAAVFRLPVDPVRDNAPNY 1430
Query: 142 FSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F++I PMDL T+K +LD +Y EF D +L NA +YN P + V A L F
Sbjct: 1431 FTVIKHPMDLSTMKAKLDNKIYKDRAEFEEDFKLMIQNAKIYNAPLSFVFNEAIALEKAF 1490
Query: 202 DIKWKSLE 209
+ +W ++
Sbjct: 1491 NDRWTKID 1498
>gi|221044240|dbj|BAH13797.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ ++ PMDLGT+K ++D
Sbjct: 223 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDN 282
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 283 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|348511394|ref|XP_003443229.1| PREDICTED: hypothetical protein LOC100690815 [Oreochromis niloticus]
Length = 3314
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
IL+SL H W F PVDP D PDY+ +I +PMD T++TRL + Y EFVADV
Sbjct: 3206 ILRSLQSHKMAWPFLEPVDP--HDAPDYYRVIKEPMDFSTMETRLQKRHYHKLTEFVADV 3263
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
F N YNP + ++ A+ L F K K +
Sbjct: 3264 TKIFDNCRYYNPNDTPFYQCAETLEAFFVQKLKGFK 3299
>gi|226493721|ref|NP_001146156.1| uncharacterized protein LOC100279725 [Zea mays]
gi|219885991|gb|ACL53370.1| unknown [Zea mays]
gi|413921106|gb|AFW61038.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 484
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 56/97 (57%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C+ IL L FN PVD L + DY +II PMDLGTVK L Y + F
Sbjct: 141 RCADILMRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSHEAF 200
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
DVRLTF+NA+ YNPP+++VH+ A L F+ +K
Sbjct: 201 AGDVRLTFNNALRYNPPDHHVHRYAGNLLASFEGMYK 237
>gi|159164343|pdb|2E7N|A Chain A, Solution Structure Of The Second Bromodomain From Human
Bromodomain-Containing Protein 3
Length = 117
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C IL+ ++ H A W F +PVD L++ DY II PMDL TVK ++D Y +
Sbjct: 17 CDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQ 76
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F ADVRL FSN YNPP++ V MA++L ++F++++ +
Sbjct: 77 GFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 117
>gi|429962983|gb|ELA42527.1| hypothetical protein VICG_00279 [Vittaforma corneae ATCC 50505]
Length = 379
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 57/98 (58%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS+IL L + F +PVDP+ L IPDY I PMD+ TVK +LD Y + DEF
Sbjct: 37 CSMILTRLKRNANAGPFLKPVDPIALGIPDYPEKIKHPMDISTVKHKLDTKTYKIPDEFH 96
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+D+ L F+N YN P++ V+ M ++L F+ + L
Sbjct: 97 SDMTLMFNNCYTYNQPDSVVYNMGKDLQKAFESLYADL 134
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F PV + D P YFSII++P DL T++ + D YS + EFV D+ L SN +
Sbjct: 188 SWPFLYPV--TEQDAPGYFSIITQPTDLSTIRNKFDMRRYSSASEFVTDLNLMISNCFKF 245
Query: 184 NPPENNVHKMAQELNNLF 201
N P++ V+K +E N +
Sbjct: 246 NKPDSEVYKCGEEFNKVI 263
>gi|344251852|gb|EGW07956.1| Bromodomain testis-specific protein [Cricetulus griseus]
Length = 565
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F PVD L + +Y+ I+ PMDLGT+K ++D Y + EF ADVRL F N Y
Sbjct: 10 AWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYKY 69
Query: 184 NPPENNVHKMAQELNNLFDIKWKSL 208
NPP++ V MA+ L ++F++ + +
Sbjct: 70 NPPDHEVVSMARMLQDVFEMHFAKI 94
>gi|302782720|ref|XP_002973133.1| hypothetical protein SELMODRAFT_413595 [Selaginella moellendorffii]
gi|300158886|gb|EFJ25507.1| hypothetical protein SELMODRAFT_413595 [Selaginella moellendorffii]
Length = 585
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 9/194 (4%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
GWVF +PV + ++ DY +I KPMDLGTVK+R+ YS F DVRLTF NA+ +
Sbjct: 224 GWVFCQPVQSLWPELVDYTKVIEKPMDLGTVKSRVQSKYYSSPKGFARDVRLTFDNAIRF 283
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVNDTRQNC---- 239
N + HK+A ++ F+ +K++E ++ A KI + RQ
Sbjct: 284 NAAGSMYHKLALKMRQKFETAFKAVERLYNRPPKPAAKSKIRPLVEVAPPPPRQKIEMVE 343
Query: 240 --PKTPPLHSTLSSKKSKMSEEKAARSSYCARAVEVERAKPAQNLSSKLVIKN--LHKGT 295
P P+ + K+ ++ E K ++ +RA ++E P KL+ N L +
Sbjct: 344 QKPVVAPVVEVIDVKQPEVLEVKEQVATPVSRARDLEFPAPKAK-KVKLMGTNPRLGRQA 402
Query: 296 NDGGRLACNIVNAK 309
N C +++AK
Sbjct: 403 NSLAYGGCRLLSAK 416
>gi|389751720|gb|EIM92793.1| Bromodomain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 802
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 110 QCSVILKSL---MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C IL L H F +PVDP+ L IPDY II KPMDL T++T+L+ Y+ +
Sbjct: 432 HCGKILDQLGRKSHHTIVAPFAQPVDPISLGIPDYPKIIKKPMDLSTMRTKLESGQYASA 491
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
D F D +L SN YN + VHK EL LF+ KW + +
Sbjct: 492 DRFRDDFKLMISNCFAYNSDTSPVHKAGVELQKLFEEKWGHMPQ 535
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 93 IEGPKDKRPKMDRGVTHQ---CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPM 149
+ P D P++ HQ + +++L F PVDP+ L+IP Y +I +PM
Sbjct: 206 VIAPVDTTPRVSTLSVHQHKFATSTIRTLKKLKDAGPFKFPVDPLALNIPHYPQVIKEPM 265
Query: 150 DLGTVKTRL------------DRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQEL 197
D T++ +L Y ++EF+ DVR F N + +N P++ + + + +
Sbjct: 266 DFSTIERKLASSNPVKPDPDPTHARYYNAEEFITDVRRIFQNCLTFNGPDHAITQSGRRV 325
Query: 198 NNLFDIKWKSLEEKWSSEVPKAGLGK 223
FD K +++ ++E PK + K
Sbjct: 326 EATFD---KQIKQMPANEAPKPPVVK 348
>gi|338797761|ref|NP_001229737.1| bromodomain testis-specific protein isoform c [Homo sapiens]
gi|338797763|ref|NP_001229736.1| bromodomain testis-specific protein isoform c [Homo sapiens]
Length = 901
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ ++ PMDLGT+K ++D
Sbjct: 223 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDN 282
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 283 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|221046272|dbj|BAH14813.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 107 VTHQ---CSVILKSLMM---HPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDR 160
VT Q CS ILK ++ W F PVD L + +Y+ ++ PMDLGT+K ++D
Sbjct: 223 VTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDN 282
Query: 161 NLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y + +F ADVRL F N YNPP++ V MA+ L ++F+ + +
Sbjct: 283 QEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|424513402|emb|CCO66024.1| predicted protein [Bathycoccus prasinos]
Length = 964
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTR----------LDRNLY 163
IL+ LM + F VDP+ LDIPDY IIS PMD GT+ R L+ Y
Sbjct: 540 ILQRLMSDRNAFPFLEKVDPIALDIPDYLDIISHPMDFGTIFKRLEPEDEHGVPLETTYY 599
Query: 164 SVSD--EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGL 221
+ SD +F DVRL F+NA YN P V+ A++L LF E +W + P +
Sbjct: 600 TDSDPSKFANDVRLVFANAFTYNKPSELVYVQAEKLAQLF-------EREWVYKFPSSAY 652
Query: 222 G 222
G
Sbjct: 653 G 653
>gi|255071051|ref|XP_002507607.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226522882|gb|ACO68865.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 433
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 39/212 (18%)
Query: 75 SKERSSILPFNKRQAQEVIEGPKDKRPKMDRG--VTHQCSV--------------ILKSL 118
+K+ + P NKR+ Q + ++ + RG V Q V IL+ L
Sbjct: 96 AKKHEKMKPANKRRKQTALRDGDEEESRHGRGFDVDTQRIVSSSTPNKSLDPFPKILRKL 155
Query: 119 MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD------EFVAD 172
M + W FN PVD + DY+ +I PMD GT+ T+ D Y+ + +FV D
Sbjct: 156 MNNRLSWPFNEPVDAEYWGVQDYYEVIKTPMDFGTIATKYDIGDYNTENSGHGALKFVTD 215
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDI---KWKSLEEKWSSEVPKAGLGKILSGKM 229
VR F NA YN P + V++ AQ L +F+ K +++KW +LSG
Sbjct: 216 VRQVFYNAWTYNQPGHQVYQYAQILARIFETELSKSVGIDDKWG----------LLSGST 265
Query: 230 MEVNDTRQNCPKTPPLHSTLSSKKSKMSEEKA 261
M + T N K ++ ++S K++EEK
Sbjct: 266 MGM--TLGNQEKIDKENADMNS--VKIAEEKG 293
>gi|330913598|ref|XP_003296313.1| hypothetical protein PTT_05982 [Pyrenophora teres f. teres 0-1]
gi|311331637|gb|EFQ95588.1| hypothetical protein PTT_05982 [Pyrenophora teres f. teres 0-1]
Length = 909
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%)
Query: 125 WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYN 184
+ F PVDPV L+IP Y II KPMD GT++ L +Y + +F AD +L F N +N
Sbjct: 566 YPFITPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQSAKDFYADAQLVFQNCYKFN 625
Query: 185 PPENNVHKMAQELNNLFDIKWK 206
P + V++M +L +LF+ WK
Sbjct: 626 PEGDAVNQMGHKLEDLFESLWK 647
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
F PVDP L IP+Y I+ PMDL T++++L Y+ +F+AD+ +N+ L+N
Sbjct: 362 AFKDPVDPHALGIPNYPEIVKHPMDLSTMESKLKEKKYNYVRDFMADLDQMITNSELFN- 420
Query: 186 PENNVHKMAQELNNL 200
N H + Q NL
Sbjct: 421 --NKQHPVTQAGYNL 433
>gi|397640630|gb|EJK74224.1| hypothetical protein THAOC_04109 [Thalassiosira oceanica]
Length = 824
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 61/95 (64%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+++ ++ H GW+F VDPV+L + DYF +I PMDL V+ +L + Y F +DV
Sbjct: 727 LVRKMIEHENGWLFKDAVDPVELGLVDYFDVIETPMDLSLVEKKLKQGCYKSEAMFESDV 786
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+L F+NA+++N E++V +A+E+ LF +K+L
Sbjct: 787 KLVFNNAIVFNGEESDVGVIAKEMLGLFSSHFKNL 821
>gi|194382430|dbj|BAG58970.1| unnamed protein product [Homo sapiens]
Length = 724
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 617 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 674
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 675 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 709
>gi|429851515|gb|ELA26702.1| transcription regulator bdf1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 921
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 111 CSVILKSLMMHPAG---WVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +L LM + F PVDPV L IP YF+II +PMDLGT+ +L Y +
Sbjct: 516 CYEVLSELMDQKHAQINFAFLHPVDPVALAIPTYFTIIKRPMDLGTIMGKLKNFDYQSAK 575
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
EF DV+ F N +N P V++ QEL ++F W S +E+W
Sbjct: 576 EFQGDVKQVFKNCFKFNQPGQPVYENGQELESIFRNLW-SKKEQW 619
>gi|412993064|emb|CCO16597.1| bromodomain containing 2 [Bathycoccus prasinos]
Length = 1076
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL-DRNLYSV 165
V QC ++ +M H G F PVD V L + +Y +II+ PMDLGT+K + D Y +
Sbjct: 503 VHRQCLAAVRQVMSHDWGGPFRMPVDAVALGLANYHTIITNPMDLGTIKKFIEDGGKYEL 562
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+ E DV LTF+NAM +N +VH MA+ L L+ K++ +
Sbjct: 563 AKEVHEDVELTFNNAMKFNAEGTDVHVMAKTLLALWHTKYEGI 605
>gi|413921105|gb|AFW61037.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 429
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 56/97 (57%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C+ IL L FN PVD L + DY +II PMDLGTVK L Y + F
Sbjct: 141 RCADILMRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSHEAF 200
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
DVRLTF+NA+ YNPP+++VH+ A L F+ +K
Sbjct: 201 AGDVRLTFNNALRYNPPDHHVHRYAGNLLASFEGMYK 237
>gi|148909151|gb|ABR17676.1| unknown [Picea sitchensis]
Length = 630
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS-DEFVAD 172
+ K++ H W F PVDP D+PDY+ II PMDL T+ RLD Y V+ D FVAD
Sbjct: 528 LFKAMTEHADAWPFKDPVDP--RDVPDYYDIIKDPMDLKTMSKRLDSEQYYVTLDMFVAD 585
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
V+ F+NA YN PE +K A L++ F
Sbjct: 586 VKRMFTNARTYNTPETIYYKCANRLDSYF 614
>gi|10441758|gb|AAG17179.1|AF191032_1 RING3, partial [Myxine glutinosa]
Length = 732
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V++K L H W F+ PVD KL++PDY+ II P+D+ T+K RL+ N Y + E + D
Sbjct: 41 VVMKVLWKHQFAWPFHHPVDAAKLNLPDYYQIIKNPLDMLTIKKRLESNYYWTAVECIQD 100
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLF 201
F+N +YN P +++ MAQ + F
Sbjct: 101 FSTMFTNCYIYNRPNDDIVLMAQTVEKAF 129
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 96 PKDKRPKMDRGVTHQCSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLG 152
P KR + C ILK + H A W F + VD L + DY II PMDL
Sbjct: 398 PVSKRVRQMSDQLRHCQTILKEIFTKKHAAYAWPFYKAVDAFALGLHDYHDIIKIPMDLT 457
Query: 153 TVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
T+K + +R Y+ EF D+RL FSN YNPP++ V MA++L ++F++++
Sbjct: 458 TIKEKFERREYTNLHEFADDMRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 510
>gi|384254005|gb|EIE27479.1| hypothetical protein COCSUDRAFT_39137 [Coccomyxa subellipsoidea
C-169]
Length = 1401
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 108 THQCSVILKSLMMHP-AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
TH +LK +M H A FN PVD L IP+Y II PMDLG + RL+ LY +
Sbjct: 151 THVTVTVLKKVMQHEIAESFFNEPVDAEGLGIPEYREIIRTPMDLGMIARRLENGLYVSA 210
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
DVRL + N +N P ++V K EL FD WK
Sbjct: 211 AAVAEDVRLVWRNCRTFNEPGSDVSKSCDELAGFFDQLWK 250
>gi|260790292|ref|XP_002590177.1| hypothetical protein BRAFLDRAFT_126069 [Branchiostoma floridae]
gi|229275366|gb|EEN46188.1| hypothetical protein BRAFLDRAFT_126069 [Branchiostoma floridae]
Length = 2552
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 108 THQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
T Q +LKSL H W F PV +L++PDY+ +I +PMDL TV RL + Y +
Sbjct: 2448 TDQLKRLLKSLQSHKMAWPFVEPVS--ELEVPDYYQVIKEPMDLSTVDKRLRQKYYKTLN 2505
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSS 214
++VAD+ F N YNP ++ K A+ L F K K+++ + S
Sbjct: 2506 QYVADISKIFDNCRYYNPSDSAFCKCAEVLEGFFLQKLKTVKSRLGS 2552
>gi|326434902|gb|EGD80472.1| hypothetical protein PTSG_13143 [Salpingoeca sp. ATCC 50818]
Length = 1105
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F PV +L + DY + PMDLGTVK R++ YS D F+ADVRL FSN Y
Sbjct: 361 AWPFYEPVKADELGLSDYRDFVDTPMDLGTVKKRIESGHYSDVDSFIADVRLVFSNCYKY 420
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLE 209
NP + V MA +L+N+F+ S +
Sbjct: 421 NPSTDPVFGMATKLHNVFEYSLASAQ 446
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L + F +PVD L+IPDY +II +PMDLGTV +L Y+ + E + D
Sbjct: 188 VVLKRLSALDSKHWFAQPVDWKALNIPDYPTIIKQPMDLGTVSKKLKERTYTSAQECIDD 247
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+ L +N +YNP N VH A+EL F+
Sbjct: 248 IHLMLNNCFVYNPATNPVHIKARELETAFE 277
>gi|303390444|ref|XP_003073453.1| putative bromodomain-containing transcription factor
[Encephalitozoon intestinalis ATCC 50506]
gi|303302599|gb|ADM12093.1| putative bromodomain-containing transcription factor
[Encephalitozoon intestinalis ATCC 50506]
Length = 371
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS IL L + F PVDPVKL IPDY I PMDL T++ +LD Y + F
Sbjct: 20 CSQILTRLKRNSNAPPFLEPVDPVKLGIPDYPEKIKHPMDLSTIRKKLDHKEYEGVEGFD 79
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPK 218
D++L F+N YNPP VH M + L +++ L E EVPK
Sbjct: 80 GDMKLMFNNCYTYNPPGTVVHDMGKALETVYN----GLMEGMPQEVPK 123
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS +L LM H A W F PVD +L +P Y+SII +PMD+ T++ +L++ Y +D
Sbjct: 158 CSEVLADLMRPKHKAYNWPFLEPVD-AEL-VPGYYSIIKEPMDMQTIRIKLEQRKYQSTD 215
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQEL 197
EF D+ L N +N P V++ QE
Sbjct: 216 EFERDLELIVENCKKFNAPGTEVYECGQEF 245
>gi|195060218|ref|XP_001995770.1| GH17937 [Drosophila grimshawi]
gi|193896556|gb|EDV95422.1| GH17937 [Drosophila grimshawi]
Length = 513
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 101 PKMDR------GVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTV 154
P++DR + + ++KSL H F +PV+ KL +PDY +II +PMDLGT+
Sbjct: 17 PRLDRPGRRTNKLDYILKTVMKSLWNHHYAHPFKQPVNAKKLKLPDYHNIIKQPMDLGTI 76
Query: 155 KTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
K RL +N Y + E VAD+ + F+N LY+ P +V A+ L +F
Sbjct: 77 KKRLTKNYYWSATEAVADINMVFTNCYLYHEPTEDVIGRAKALEIVF 123
>gi|162464431|ref|NP_001105145.1| histone acetyl transferase GNAT/MYST 101 [Zea mays]
gi|17017400|gb|AAL33654.1|AF440227_1 histone acetyl transferase [Zea mays]
gi|18369787|emb|CAD21650.1| GCN5 protein [Zea mays]
gi|18447805|emb|CAD22097.1| histone acetyltransferase [Zea mays]
gi|223949013|gb|ACN28590.1| unknown [Zea mays]
gi|413934197|gb|AFW68748.1| GCN5 proteinHistone acetyl transferaseHistone acetyltransferase
[Zea mays]
Length = 515
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 65/130 (50%), Gaps = 20/130 (15%)
Query: 74 HSKERSSILP-FNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVD 132
HSK RSS P +N + Q +T LK+L HP W F PVD
Sbjct: 389 HSKSRSSFSPDYNTYRQQ----------------LTTLMQTALKNLNEHPDAWPFKEPVD 432
Query: 133 PVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDE-FVADVRLTFSNAMLYNPPENNVH 191
D+PDY+ II P+DL T+ R+D Y V+ E FVAD++ FSNA YN P+ +
Sbjct: 433 --SRDVPDYYDIIKDPIDLRTMLRRVDSEQYYVTLEMFVADMKRMFSNARTYNSPDTIYY 490
Query: 192 KMAQELNNLF 201
K A L N F
Sbjct: 491 KCATRLENFF 500
>gi|321260951|ref|XP_003195195.1| TFIID subunit (150 kDa); Taf2p [Cryptococcus gattii WM276]
gi|317461668|gb|ADV23408.1| TFIID subunit (150 kDa); Taf2p [Cryptococcus gattii WM276]
Length = 1729
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 94 EGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGT 153
+ PK +R + + L L+ + F +PVDPV+ PDY ++I KPMDL T
Sbjct: 1176 DAPKAQRKGLSDNDFKAIVIALNKLVTDKRSFFFRQPVDPVRDMAPDYLTVIKKPMDLST 1235
Query: 154 VKTRLDRNLYSVSDEFVADVRLTFSNAMLYN-PPENNVHKMAQELNNLFDIKWKSLEEKW 212
++ +LD +Y+ +FV+D+RL +N YN P + V K + LF+ W E
Sbjct: 1236 IRAKLDNGMYTSRQDFVSDIRLIITNCYTYNSTPASPVRKAGEAFEKLFNTLWAKTENTL 1295
Query: 213 SSE 215
S++
Sbjct: 1296 SAQ 1298
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 108 THQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
T + +L +L P+ +F RPVDP+ P Y I PMDLGT+ ++++ Y
Sbjct: 1517 TKRAKALLTTLQKEPSAILFLRPVDPILDGCPTYLDEIKHPMDLGTIGKKIEQKKYKTMG 1576
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
+F D+ L F+N +NPP + +A + ++ WK + SS++
Sbjct: 1577 QFARDIELVFANCRQFNPP-GEITALADMVEEVY---WKDWPKTVSSKM 1621
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSII--SKPMDLGTVKTRLDRNLYSVSDEFVA 171
+L + +P F VDPV L IP YF II DLG +K++L++ Y + +
Sbjct: 1632 MLNQALKNPLSEWFRLAVDPVALGIPQYFDIIPPEDARDLGLIKSKLEKGQYQTAKQVDE 1691
Query: 172 DVRLTFSNAMLYN 184
+V L NA ++N
Sbjct: 1692 EVELMLENARVFN 1704
>gi|340712317|ref|XP_003394708.1| PREDICTED: nucleosome-remodeling factor subunit NURF301-like isoform
2 [Bombus terrestris]
Length = 2081
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + H + W F PVDP + PDY+ +I +PMDL T++ R++ Y EF+ D+
Sbjct: 1981 LIKQIQAHKSAWPFMEPVDPN--EAPDYYKVIKEPMDLQTIELRINDRSYKKLSEFIGDM 2038
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
F N YNP E+ K A+ L F K KSL EK+S
Sbjct: 2039 TKIFDNCRYYNPKESPFFKCAESLETYFVHKIKSLREKFS 2078
>gi|444726972|gb|ELW67482.1| Nucleosome-remodeling factor subunit BPTF [Tupaia chinensis]
Length = 3098
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2991 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQRRYYEKLTEFVADM 3048
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 3049 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 3083
>gi|417414176|gb|JAA53387.1| Putative nucleosome remodeling factor subunit, partial [Desmodus
rotundus]
Length = 2959
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2852 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQRRYYEKLTEFVADM 2909
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2910 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2944
>gi|417414168|gb|JAA53383.1| Putative nucleosome remodeling factor subunit, partial [Desmodus
rotundus]
Length = 2811
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2704 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQRRYYEKLTEFVADM 2761
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2762 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2796
>gi|441642658|ref|XP_003276139.2| PREDICTED: nucleosome-remodeling factor subunit BPTF [Nomascus
leucogenys]
Length = 2272
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2165 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2222
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
F N YNP ++ ++ A+ L + F K K +
Sbjct: 2223 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGFK 2258
>gi|431908861|gb|ELK12453.1| Nucleosome-remodeling factor subunit BPTF [Pteropus alecto]
Length = 2997
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2874 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQRRYYEKLTEFVADM 2931
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2932 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2966
>gi|417414164|gb|JAA53381.1| Putative nucleosome remodeling factor subunit, partial [Desmodus
rotundus]
Length = 2808
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2701 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQRRYYEKLTEFVADM 2758
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2759 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2793
>gi|325089952|gb|EGC43262.1| transcription regulator BDF1 [Ajellomyces capsulatus H88]
Length = 845
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPV L+IP Y SII KPMDL TV+T+L Y + E ADVRL F N +N P
Sbjct: 504 FYYPVDPVALNIPTYHSIIKKPMDLQTVQTKLQTGQYENAKEMEADVRLIFKNCYKFNIP 563
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKW 212
+ + + L +FD KW S + +W
Sbjct: 564 GDPTYNSGKSLEEVFDNKW-SQKRRW 588
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPVKL+IP+Y II +PMDL T++ +L Y+ +D L N++ +N P
Sbjct: 302 FREPVDPVKLNIPNYPLIIKQPMDLRTIEEKLKAGSYTSLFAVTSDFDLMVDNSVTFNGP 361
Query: 187 ENNVHKMAQELNNLFD 202
E+ V L F+
Sbjct: 362 EHVVSMEGANLKQSFE 377
>gi|417414158|gb|JAA53378.1| Putative nucleosome remodeling factor subunit, partial [Desmodus
rotundus]
Length = 2781
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2674 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQRRYYEKLTEFVADM 2731
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2732 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2766
>gi|297273456|ref|XP_002808182.1| PREDICTED: LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit
BPTF-like [Macaca mulatta]
Length = 3013
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2906 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2963
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2964 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2998
>gi|417414162|gb|JAA53380.1| Putative nucleosome remodeling factor subunit, partial [Desmodus
rotundus]
Length = 2795
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2688 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQRRYYEKLTEFVADM 2745
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2746 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2780
>gi|417414160|gb|JAA53379.1| Putative nucleosome remodeling factor subunit, partial [Desmodus
rotundus]
Length = 2784
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2677 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQRRYYEKLTEFVADM 2734
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2735 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2769
>gi|417414141|gb|JAA53371.1| Putative nucleosome remodeling factor subunit, partial [Desmodus
rotundus]
Length = 2599
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2492 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQRRYYEKLTEFVADM 2549
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2550 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2584
>gi|215274183|sp|Q12830.3|BPTF_HUMAN RecName: Full=Nucleosome-remodeling factor subunit BPTF; AltName:
Full=Bromodomain and PHD finger-containing transcription
factor; AltName: Full=Fetal Alz-50 clone 1 protein;
AltName: Full=Fetal Alzheimer antigen
Length = 3046
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2939 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2996
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2997 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 3031
>gi|417414170|gb|JAA53384.1| Putative nucleosome remodeling factor subunit, partial [Desmodus
rotundus]
Length = 2845
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2738 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQRRYYEKLTEFVADM 2795
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2796 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2830
>gi|38788260|ref|NP_004450.3| nucleosome-remodeling factor subunit BPTF isoform 2 [Homo sapiens]
Length = 2903
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2796 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2853
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2854 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2888
>gi|417414156|gb|JAA53377.1| Putative nucleosome remodeling factor subunit, partial [Desmodus
rotundus]
Length = 2768
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2661 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQRRYYEKLTEFVADM 2718
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2719 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2753
>gi|417414139|gb|JAA53370.1| Putative nucleosome remodeling factor subunit, partial [Desmodus
rotundus]
Length = 2572
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2465 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQRRYYEKLTEFVADM 2522
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2523 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2557
>gi|322790016|gb|EFZ15092.1| hypothetical protein SINV_12870 [Solenopsis invicta]
Length = 2261
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + H + W F PVDP + PDY+ +I +PMDL T++ R++ Y EF+ D+
Sbjct: 2161 LIKQIQAHKSAWPFMEPVDPN--EAPDYYKVIKEPMDLQTIELRINDRSYKKLSEFIGDM 2218
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
F N YNP E+ K A+ L F K KSL EK+S
Sbjct: 2219 TKIFDNCRYYNPKESPFFKCAESLETYFVHKIKSLREKFS 2258
>gi|125549798|gb|EAY95620.1| hypothetical protein OsI_17475 [Oryza sativa Indica Group]
Length = 456
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%)
Query: 102 KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
K+ + +C IL L FN PV+ +L + DY ++I PMDLGTV+ L
Sbjct: 115 KLRAAMRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAG 174
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
Y D+F ADVRLTFSNA+ YNP + VH A +L F+ +K+
Sbjct: 175 RYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKA 220
>gi|340712315|ref|XP_003394707.1| PREDICTED: nucleosome-remodeling factor subunit NURF301-like isoform
1 [Bombus terrestris]
Length = 2733
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + H + W F PVDP + PDY+ +I +PMDL T++ R++ Y EF+ D+
Sbjct: 2633 LIKQIQAHKSAWPFMEPVDPN--EAPDYYKVIKEPMDLQTIELRINDRSYKKLSEFIGDM 2690
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
F N YNP E+ K A+ L F K KSL EK+S
Sbjct: 2691 TKIFDNCRYYNPKESPFFKCAESLETYFVHKIKSLREKFS 2730
>gi|395826932|ref|XP_003786667.1| PREDICTED: nucleosome-remodeling factor subunit BPTF [Otolemur
garnettii]
Length = 3070
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2963 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 3020
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 3021 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 3055
>gi|332848872|ref|XP_003315736.1| PREDICTED: nucleosome-remodeling factor subunit BPTF isoform 1 [Pan
troglodytes]
Length = 2900
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2793 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2850
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2851 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2885
>gi|426239145|ref|XP_004013487.1| PREDICTED: nucleosome-remodeling factor subunit BPTF [Ovis aries]
Length = 2885
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2778 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2835
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2836 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2870
>gi|417414147|gb|JAA53374.1| Putative nucleosome remodeling factor subunit, partial [Desmodus
rotundus]
Length = 2704
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2597 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQRRYYEKLTEFVADM 2654
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2655 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2689
>gi|115460642|ref|NP_001053921.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|38344165|emb|CAE03496.2| OSJNBa0053K19.4 [Oryza sativa Japonica Group]
gi|38345713|emb|CAD41835.2| OSJNBb0085C12.15 [Oryza sativa Japonica Group]
gi|113565492|dbj|BAF15835.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|215695153|dbj|BAG90344.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 456
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%)
Query: 102 KMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN 161
K+ + +C IL L FN PV+ +L + DY ++I PMDLGTV+ L
Sbjct: 115 KLRAAMRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAG 174
Query: 162 LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
Y D+F ADVRLTFSNA+ YNP + VH A +L F+ +K+
Sbjct: 175 RYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKA 220
>gi|302417904|ref|XP_003006783.1| bromodomain-containing factor 1 [Verticillium albo-atrum VaMs.102]
gi|261354385|gb|EEY16813.1| bromodomain-containing factor 1 [Verticillium albo-atrum VaMs.102]
Length = 839
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPV L IP Y+S+I PMDLGT+K +L N Y + V DV+L N + +N P
Sbjct: 462 FVVPVDPVALQIPQYYSLIKNPMDLGTIKKKLMTNEYQTAKSVVGDVQLIVKNCLKFNGP 521
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKW 212
++ V+ +A +L LF W S +E+W
Sbjct: 522 DHPVYGLAVQLERLFRDMW-SKKEQW 546
>gi|345804892|ref|XP_537586.3| PREDICTED: nucleosome-remodeling factor subunit BPTF [Canis lupus
familiaris]
Length = 2863
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2756 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2813
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2814 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2848
>gi|338711364|ref|XP_001917126.2| PREDICTED: nucleosome-remodeling factor subunit BPTF [Equus caballus]
Length = 2934
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2827 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2884
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2885 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2919
>gi|332848874|ref|XP_003315737.1| PREDICTED: nucleosome-remodeling factor subunit BPTF isoform 2 [Pan
troglodytes]
Length = 2917
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2810 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2867
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2868 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2902
>gi|350417610|ref|XP_003491506.1| PREDICTED: nucleosome-remodeling factor subunit NURF301-like [Bombus
impatiens]
Length = 2733
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + H + W F PVDP + PDY+ +I +PMDL T++ R++ Y EF+ D+
Sbjct: 2633 LIKQIQAHKSAWPFMEPVDPN--EAPDYYKVIKEPMDLQTIELRINDRSYKKLSEFIGDM 2690
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
F N YNP E+ K A+ L F K KSL EK+S
Sbjct: 2691 TKIFDNCRYYNPKESPFFKCAESLETYFVHKIKSLREKFS 2730
>gi|38788274|ref|NP_872579.2| nucleosome-remodeling factor subunit BPTF isoform 1 [Homo sapiens]
Length = 2920
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2813 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2870
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2871 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2905
>gi|301778515|ref|XP_002924677.1| PREDICTED: LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit
BPTF-like [Ailuropoda melanoleuca]
Length = 2827
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2720 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2777
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2778 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2812
>gi|119609445|gb|EAW89039.1| fetal Alzheimer antigen, isoform CRA_b [Homo sapiens]
Length = 2781
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2674 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2731
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2732 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2766
>gi|31322942|gb|AAP22284.1| bromodomain PHD finger transcription factor [Homo sapiens]
Length = 2764
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2657 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2714
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2715 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2749
>gi|426347052|ref|XP_004041175.1| PREDICTED: nucleosome-remodeling factor subunit BPTF [Gorilla gorilla
gorilla]
Length = 2909
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2802 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2859
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2860 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2894
>gi|344243050|gb|EGV99153.1| Nucleosome-remodeling factor subunit BPTF [Cricetulus griseus]
Length = 1784
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 1687 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQKRYYEKLTEFVADM 1744
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
F N YNP ++ ++ A+ L + F K K +
Sbjct: 1745 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGFK 1780
>gi|328788592|ref|XP_395718.4| PREDICTED: nucleosome-remodeling factor subunit NURF301-like isoform
1 [Apis mellifera]
Length = 2735
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + H + W F PVDP + PDY+ +I +PMDL T++ R++ Y EF+ D+
Sbjct: 2635 LIKQIQAHKSAWPFMEPVDPN--EAPDYYKVIKEPMDLQTIELRINDRSYKKLSEFIGDM 2692
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
F N YNP E+ K A+ L F K KSL EK+S
Sbjct: 2693 TKIFDNCRYYNPKESPFFKCAESLETYFVHKIKSLREKFS 2732
>gi|6683492|dbj|BAA89208.1| bromodomain PHD finger transcription factor [Homo sapiens]
Length = 2781
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2674 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2731
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2732 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2766
>gi|406862314|gb|EKD15365.1| ankyrin repeat-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 498
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Query: 111 CSVILKSLMMHPAGWV-----FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSV 165
C ++ ++ P W F PVDPV ++P+Y +I KPMDL T+K ++DR+ Y+
Sbjct: 383 CRALITRMVFGPGYWTRLVKAFRHPVDPVLENVPNYLEVIKKPMDLTTIKGKMDRDEYTT 442
Query: 166 SDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEV 216
+ EF +D+R FSN + + V+ Q+L N F+ +W +L K+ ++V
Sbjct: 443 AGEFESDIRQIFSNCYEFWKEGDPVYIQGQKLENKFNTQW-NLRHKYLNDV 492
>gi|296203046|ref|XP_002806913.1| PREDICTED: LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit
BPTF-like [Callithrix jacchus]
Length = 3120
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 3013 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 3070
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 3071 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 3105
>gi|410981574|ref|XP_003997142.1| PREDICTED: LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit
BPTF [Felis catus]
Length = 2942
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2835 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2892
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2893 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2927
>gi|325181691|emb|CCA16145.1| hypothetical protein PITG_08294 [Albugo laibachii Nc14]
gi|325190610|emb|CCA25106.1| hypothetical protein PITG_08294 [Albugo laibachii Nc14]
Length = 182
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+CS IL L H W F PVDP+ L+IP YF + PMDL T++++L +NLYS EF
Sbjct: 5 KCSYILDVLSSHEFSWPFLEPVDPIALNIPTYFDFVKNPMDLRTMRSKLKQNLYSKPIEF 64
Query: 170 VADVRLTFSNAMLYNPP---ENNVHKMAQEL 197
D+ L F NA+ +N EN+V +AQ+L
Sbjct: 65 RDDMILMFENAINFNKDDRRENSVRTLAQKL 95
>gi|397482405|ref|XP_003812418.1| PREDICTED: LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit
BPTF [Pan paniscus]
Length = 2895
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2788 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2845
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2846 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2880
>gi|440912677|gb|ELR62229.1| Nucleosome-remodeling factor subunit BPTF, partial [Bos grunniens
mutus]
Length = 2841
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2745 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2802
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2803 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2837
>gi|300175329|emb|CBK20640.2| unnamed protein product [Blastocystis hominis]
Length = 249
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPV L+IPDYF II PMD GT+ RL + E+V + L F+NA+ YN P
Sbjct: 115 FLHPVDPVALNIPDYFDIIKNPMDFGTIYQRLINGQITTEAEYVKLMELVFTNAITYNKP 174
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKWS 213
+++V MA EL FD ++ ++ + S
Sbjct: 175 QDDVAFMAHELQAYFDKEYTQMKRQAS 201
>gi|380014032|ref|XP_003691048.1| PREDICTED: LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit
NURF301-like [Apis florea]
Length = 2734
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + H + W F PVDP + PDY+ +I +PMDL T++ R++ Y EF+ D+
Sbjct: 2634 LIKQIQAHKSAWPFMEPVDPN--EAPDYYKVIKEPMDLQTIELRINDRSYKKLSEFIGDM 2691
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
F N YNP E+ K A+ L F K KSL EK+S
Sbjct: 2692 TKIFDNCRYYNPKESPFFKCAESLETYFVHKIKSLREKFS 2731
>gi|358417541|ref|XP_001249746.3| PREDICTED: nucleosome-remodeling factor subunit BPTF isoform 1 [Bos
taurus]
Length = 2929
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2822 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2879
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2880 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2914
>gi|351710339|gb|EHB13258.1| Nucleosome-remodeling factor subunit BPTF, partial [Heterocephalus
glaber]
Length = 2876
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2780 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2837
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2838 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2872
>gi|296476179|tpg|DAA18294.1| TPA: Nucleosome-remodeling factor subunit BPTF-like [Bos taurus]
Length = 2906
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2799 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2856
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2857 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2891
>gi|119194171|ref|XP_001247689.1| hypothetical protein CIMG_01460 [Coccidioides immitis RS]
gi|392863070|gb|EAS36227.2| transcription regulator BDF1 [Coccidioides immitis RS]
Length = 806
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPV L+IP Y +II KPMDL T++T+L Y S E DVRL F N +N P
Sbjct: 478 FYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQTGQYENSKEMENDVRLMFKNCYKFNIP 537
Query: 187 ENNVHKMAQELNNLFDIKW 205
+ + ++L +FD KW
Sbjct: 538 GDPTYNAGKKLEEIFDYKW 556
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
F PVDPVKL+IP+Y +II +PMDL T++ ++ Y D+ AD +L N + +N
Sbjct: 276 FFRVPVDPVKLNIPNYPTIIKEPMDLHTMEDKIKSGAYKTVDQITADFKLMIDNCITFNG 335
Query: 186 PENNV 190
PE+ V
Sbjct: 336 PEHVV 340
>gi|74139106|dbj|BAE38448.1| unnamed protein product [Mus musculus]
Length = 669
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 562 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQKRYYEKLTEFVADM 619
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
F N YNP + ++ A+ L + F K K +
Sbjct: 620 TKIFDNCRYYNPRDTPFYQCAEVLESFFVQKLKGFK 655
>gi|346978940|gb|EGY22392.1| bromodomain-containing factor 1 [Verticillium dahliae VdLs.17]
Length = 938
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPV L IP Y+S+I PMDLGT+K +L N Y + V DV+L N + +N P
Sbjct: 561 FVVPVDPVALQIPQYYSLIKNPMDLGTIKKKLMTNEYQTAKSVVGDVQLIVKNCLKFNGP 620
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKW 212
++ V+ +A +L LF W S +E+W
Sbjct: 621 DHPVYGLAVQLERLFRDMW-SKKEQW 645
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 140 DYFSIISKPMDLGTVKTRL-DRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELN 198
+Y ++++KPMD+G ++ L D Y + AD+ L +SNA+ +N P ++V +
Sbjct: 365 NYAALVAKPMDIGLMERNLRDGTKYPTLGDLKADLTLLYSNAVSFNGPSHDVTLAGR--- 421
Query: 199 NLFDIKWKSLEEKWSSEVPKA 219
N+ W L + + E PKA
Sbjct: 422 NVVPAIWARLLDIPAEEPPKA 442
>gi|326434901|gb|EGD80471.1| hypothetical protein, variant [Salpingoeca sp. ATCC 50818]
Length = 905
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W F PV +L + DY + PMDLGTVK R++ YS D F+ADVRL FSN Y
Sbjct: 361 AWPFYEPVKADELGLSDYRDFVDTPMDLGTVKKRIESGHYSDVDSFIADVRLVFSNCYKY 420
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLE 209
NP + V MA +L+N+F+ S +
Sbjct: 421 NPSTDPVFGMATKLHNVFEYSLASAQ 446
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+LK L + F +PVD L+IPDY +II +PMDLGTV +L Y+ + E + D
Sbjct: 188 VVLKRLSALDSKHWFAQPVDWKALNIPDYPTIIKQPMDLGTVSKKLKERTYTSAQECIDD 247
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+ L +N +YNP N VH A+EL F+
Sbjct: 248 IHLMLNNCFVYNPATNPVHIKARELETAFE 277
>gi|147779795|emb|CAN62295.1| hypothetical protein VITISV_019973 [Vitis vinifera]
Length = 377
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q IL+ +M H F PVD L + DY+ +I KPMD T+K ++ D Y
Sbjct: 99 LMRQFGTILRQIMQHKWAGPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGY 158
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
E ADVRL F NAM YN ++VH MA+ L F EEKW +PK
Sbjct: 159 KNVREICADVRLVFKNAMKYNDERHDVHVMAKTLLGKF-------EEKWLQLLPKV 207
>gi|383857078|ref|XP_003704033.1| PREDICTED: LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit
NURF301-like [Megachile rotundata]
Length = 2734
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + H + W F PVDP + PDY+ +I +PMDL T++ R++ Y EF+ D+
Sbjct: 2634 LIKQIQAHKSAWPFMEPVDPN--EAPDYYKVIKEPMDLQTIELRINDRSYKKLSEFIGDM 2691
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
F N YNP E+ K A+ L F K KSL EK+S
Sbjct: 2692 TKIFDNCRYYNPRESPFFKCAESLETYFVHKIKSLREKFS 2731
>gi|307180228|gb|EFN68261.1| Nucleosome-remodeling factor subunit NURF301 [Camponotus floridanus]
Length = 3651
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + H + W F PVDP + PDY+ +I +PMDL T++ R++ Y EF+ D+
Sbjct: 2645 LIKQIQAHKSAWPFMEPVDPN--EAPDYYKVIKEPMDLQTIELRINDRSYKKLSEFIGDM 2702
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGKMMEVN 233
F N YNP E+ K A+ L F K KSL EK+S G K
Sbjct: 2703 TKIFDNCRYYNPKESPFFKCAESLETYFVHKIKSLREKFSE-------GNAFHAK----- 2750
Query: 234 DTRQNCPKTPPLHSTLSSKKSKMSEE 259
QN + P+ T K +SEE
Sbjct: 2751 ---QNGTQFVPVQYTTPRKTETISEE 2773
>gi|449452116|ref|XP_004143806.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
gi|449485919|ref|XP_004157310.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
Length = 378
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q IL+ + H W F +PVD L + DY+ +I KPMD T+K ++ D Y
Sbjct: 97 LMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGY 156
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
E +DVRL F NAM YN ++VH MA+ L F EEKW +PK
Sbjct: 157 KNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKF-------EEKWLQLLPKV 205
>gi|409083053|gb|EKM83410.1| hypothetical protein AGABI1DRAFT_31889 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1349
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 62/108 (57%), Gaps = 12/108 (11%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL--------DRN- 161
C ++SL F RPVDPV L+IP YF+II +PMDL TV+ +L D N
Sbjct: 807 CQSTVRSLKKIKDAAPFLRPVDPVALNIPHYFTIIKQPMDLSTVERKLASSNPQKPDPNS 866
Query: 162 ---LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
Y+ +DEFVADVRL F N + +N P++ V M + + +FD + K
Sbjct: 867 ENPRYNHADEFVADVRLMFYNCLTFNGPDHAVTAMGKRVEEIFDKQIK 914
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 97 KDKRPKMDRGVTHQ---CSVILKSL---MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMD 150
K KR K D G Q C IL L + F PVD VK+D+P Y ++ KPMD
Sbjct: 1003 KSKRVK-DDGTAEQLKYCGKILSDLNRKQHYNVASPFYEPVDWVKMDLPMYPKVVKKPMD 1061
Query: 151 LGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
L T++ +LD N Y+ + +F +D +L N +NP V +L LF+ KWKSL
Sbjct: 1062 LSTMRRKLDNNEYAAAKDFYSDFKLMIKNCFTFNPVGTPVQIAGADLQRLFEEKWKSL 1119
>gi|332027303|gb|EGI67387.1| Nucleosome-remodeling factor subunit [Acromyrmex echinatior]
Length = 2702
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + H + W F PVDP + PDY+ +I +PMDL T++ R++ Y EF+ D+
Sbjct: 2602 LIKQIQAHKSAWPFMEPVDPN--EAPDYYKVIKEPMDLQTIELRINDRSYKKLSEFIGDM 2659
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
F N YNP E+ K A+ L F K KSL EK+S
Sbjct: 2660 TKIFDNCRYYNPKESPFFKCAESLETYFVHKIKSLREKFS 2699
>gi|225559913|gb|EEH08195.1| bromodomain-containing protein BDF1 [Ajellomyces capsulatus G186AR]
Length = 501
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPV L+IP Y SII KPMDL TV+T+L Y + E ADVRL F N +N P
Sbjct: 160 FYYPVDPVALNIPTYHSIIKKPMDLQTVQTKLQTGQYENAKEMEADVRLMFKNCYKFNIP 219
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKW 212
+ + + L +FD KW S + +W
Sbjct: 220 GDPTYNSGKSLEEVFDNKW-SQKRRW 244
>gi|18204482|gb|AAH21489.1| Bptf protein [Mus musculus]
Length = 645
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 538 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQKRYYEKLTEFVADM 595
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
F N YNP + ++ A+ L + F K K +
Sbjct: 596 TKIFDNCRYYNPRDTPFYQCAEVLESFFVQKLKGFK 631
>gi|359077124|ref|XP_002696170.2| PREDICTED: nucleosome-remodeling factor subunit BPTF [Bos taurus]
Length = 2899
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2792 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2849
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2850 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2884
>gi|359484096|ref|XP_003633062.1| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 377
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q IL+ +M H F PVD L + DY+ +I KPMD T+K ++ D Y
Sbjct: 99 LMRQFGTILRQIMQHKWAGPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGY 158
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
E ADVRL F NAM YN ++VH MA+ L F EEKW +PK
Sbjct: 159 KNVREICADVRLVFKNAMKYNDERHDVHVMAKTLLGKF-------EEKWLQLLPKV 207
>gi|195063016|ref|XP_001996299.1| GH22418 [Drosophila grimshawi]
gi|193899794|gb|EDV98660.1| GH22418 [Drosophila grimshawi]
Length = 309
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 92 VIEGPKDKRPKMDRGVTH--QCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSII 145
V++ P +R +DR H Q ILK++M H + F +PV+ KL +PDY II
Sbjct: 10 VVQPPTVQR--LDRPGRHTNQLEYILKTVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDII 67
Query: 146 SKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+PMDL T+K RL + Y + E AD+ L F+N LYN P +V MA+ L ++F
Sbjct: 68 KQPMDLATIKKRLANSYYWSATEAAADINLIFTNCSLYNKPTEDVIIMAKVLESVF 123
>gi|344231353|gb|EGV63235.1| Bromodomain-containing protein [Candida tenuis ATCC 10573]
Length = 503
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 94 EGPKDKRPKMDRGVT--HQCSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKP 148
E P D RP+ + C+ ILK L+ + F +PVD V L+IP+Y II +P
Sbjct: 169 ELPYDNRPRKKKFAADLRFCNQILKDLISKKHFSYNFPFLQPVDAVALNIPNYSDIIKQP 228
Query: 149 MDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
MDL T++++L N Y DEF +DV L F N +NP +V M +L ++F KW
Sbjct: 229 MDLSTIQSKLANNQYENGDEFESDVTLMFENCYKFNPEGTDVSMMGHKLQDIFQKKW 285
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVD +KL+IP Y++ + KPMDL T++ +L + Y V ++F+ D L SN + +N
Sbjct: 45 FLKPVDIIKLNIPFYYNFVPKPMDLSTIEKKLTVSAYEVPEQFIDDFNLMVSNCIKFNGE 104
Query: 187 ENNVHKMAQELNNLFD 202
+ + KM + + F+
Sbjct: 105 NSPIAKMGKNIQAYFE 120
>gi|303311489|ref|XP_003065756.1| Bromodomain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105418|gb|EER23611.1| Bromodomain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320039630|gb|EFW21564.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 806
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPV L+IP Y +II KPMDL T++T+L Y S E DVRL F N +N P
Sbjct: 478 FYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQTGQYENSKEMENDVRLMFKNCYKFNIP 537
Query: 187 ENNVHKMAQELNNLFDIKW 205
+ + ++L +FD KW
Sbjct: 538 GDPTYNAGKKLEEIFDYKW 556
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
F PVDPVKL+IP+Y +II +PMDL T++ ++ Y + D+ AD +L N + +N
Sbjct: 276 FFRVPVDPVKLNIPNYPTIIKEPMDLHTMEDKIKSGAYKMVDQITADFKLMIDNCITFNG 335
Query: 186 PENNV 190
PE+ V
Sbjct: 336 PEHVV 340
>gi|393248006|gb|EJD55513.1| Bromodomain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 748
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 94 EGPKDKRPKM-DRGVTHQ---CSVILKSLMMHPAGW----VFNRPVDPVKLDIPDYFSII 145
E PK RPK D G Q CS +++ M W F PVD KLDIP Y II
Sbjct: 395 ELPKRTRPKKKDDGTQEQLKFCSRLIQE-MYKKQHWQIAAPFYEPVDWNKLDIPSYPKII 453
Query: 146 SKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
KPMDL T+K +LD + YS + +F AD +L N +NPP V+ Q L LF+ KW
Sbjct: 454 KKPMDLLTMKKKLDNHQYSDALKFYADFKLMIRNCFTFNPPGTPVNNAGQALAALFEEKW 513
Query: 206 KSL 208
+L
Sbjct: 514 AAL 516
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN------------LYSVSDEFVADVR 174
F +PVDP+ L+IP Y +II+ PMDLGTV+ +L + YS +EF AD+R
Sbjct: 229 FLQPVDPLALNIPHYPTIITHPMDLGTVERKLQASNPLKVDSSSAVGRYSAVEEFTADIR 288
Query: 175 LTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
L F+N +N PE+ V M + L +FD + K L
Sbjct: 289 LIFANCERFNGPEHAVTLMGKRLEQVFDKQIKQL 322
>gi|195062991|ref|XP_001996293.1| GH22415 [Drosophila grimshawi]
gi|193899788|gb|EDV98654.1| GH22415 [Drosophila grimshawi]
Length = 309
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 92 VIEGPKDKRPKMDRGVTH--QCSVILKSLMM----HPAGWVFNRPVDPVKLDIPDYFSII 145
V++ P +R +DR H Q ILK++M H + F +PV+ KL +PDY II
Sbjct: 10 VVQPPTVQR--LDRPGRHTNQLEYILKTVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDII 67
Query: 146 SKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
+PMDL T+K RL + Y + E AD+ L F+N LYN P +V MA+ L ++F
Sbjct: 68 KQPMDLATIKKRLANSYYWSATEAAADINLIFTNCSLYNKPTEDVIIMAKVLESVF 123
>gi|349580096|dbj|GAA25257.1| K7_Bdf1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 686
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +LK LM H + + F PVDPV +++P YF + +PMDLGT+ +L+ Y +
Sbjct: 321 CQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTME 380
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+F DVRL F N +NP V+ M L +F+ KW
Sbjct: 381 DFGRDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 418
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPVKLDIP YF+ I +PMDL T++ +L+ Y V ++ D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 187 ENNVHKMAQELNNLFD 202
+ +MA+ + F+
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|608567|gb|AAA89115.1| Bdf1p [Saccharomyces cerevisiae]
Length = 685
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +LK LM H + + F PVDPV +++P YF + +PMDLGT+ +L+ Y +
Sbjct: 320 CQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTME 379
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+F DVRL F N +NP V+ M L +F+ KW
Sbjct: 380 DFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 417
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPVKLDIP YF+ I +PMDL T++ +L+ Y V ++ D L +N++ +N P
Sbjct: 172 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 231
Query: 187 ENNVHKMAQELNNLFD 202
+ +MA+ + F+
Sbjct: 232 NAGISQMARNIQASFE 247
>gi|6323431|ref|NP_013503.1| Bdf1p [Saccharomyces cerevisiae S288c]
gi|5921175|sp|P35817.3|BDF1_YEAST RecName: Full=Bromodomain-containing factor 1
gi|625115|gb|AAB82357.1| Bdf1p [Saccharomyces cerevisiae]
gi|285813804|tpg|DAA09700.1| TPA: Bdf1p [Saccharomyces cerevisiae S288c]
gi|392297901|gb|EIW09000.1| Bdf1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 686
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +LK LM H + + F PVDPV +++P YF + +PMDLGT+ +L+ Y +
Sbjct: 321 CQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTME 380
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+F DVRL F N +NP V+ M L +F+ KW
Sbjct: 381 DFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 418
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPVKLDIP YF+ I +PMDL T++ +L+ Y V ++ D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 187 ENNVHKMAQELNNLFD 202
+ +MA+ + F+
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|348560178|ref|XP_003465891.1| PREDICTED: nucleosome-remodeling factor subunit BPTF-like [Cavia
porcellus]
Length = 3007
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 2900 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 2957
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2958 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2992
>gi|195124137|ref|XP_002006550.1| GI21118 [Drosophila mojavensis]
gi|193911618|gb|EDW10485.1| GI21118 [Drosophila mojavensis]
Length = 235
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 9/105 (8%)
Query: 124 GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLY 183
W+F P+D L + DY+ I+ PMDL TVK RL+ N Y+ S +F +DVR F NA LY
Sbjct: 10 AWIFYEPIDAKLLGLIDYYKIVKHPMDLSTVKYRLNSNFYASSADFASDVRRIFYNAYLY 69
Query: 184 NPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSGK 228
P + + MA++L +F E S+VPK + I SGK
Sbjct: 70 TSPGHLCYDMAKKLQIIF--------ENMYSKVPKPYI-PIDSGK 105
>gi|151940920|gb|EDN59302.1| bromodomain factor [Saccharomyces cerevisiae YJM789]
gi|323303730|gb|EGA57516.1| Bdf1p [Saccharomyces cerevisiae FostersB]
gi|323307897|gb|EGA61157.1| Bdf1p [Saccharomyces cerevisiae FostersO]
Length = 686
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +LK LM H + + F PVDPV +++P YF + +PMDLGT+ +L+ Y +
Sbjct: 321 CQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTME 380
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+F DVRL F N +NP V+ M L +F+ KW
Sbjct: 381 DFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 418
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPVKLDIP YF+ I +PMDL T++ +L+ Y V ++ D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 187 ENNVHKMAQELNNLFD 202
+ +MA+ + F+
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|38174486|gb|AAH60715.1| Bptf protein [Mus musculus]
Length = 1114
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 1007 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQKRYYEKLTEFVADM 1064
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
F N YNP + ++ A+ L + F K K +
Sbjct: 1065 TKIFDNCRYYNPRDTPFYQCAEVLESFFVQKLKGFK 1100
>gi|218195611|gb|EEC78038.1| hypothetical protein OsI_17470 [Oryza sativa Indica Group]
Length = 330
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C IL L FN PV+ +L + DY ++I PMDLGTV+ L Y D+F
Sbjct: 4 RCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDDF 63
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
AD+RLTFSNA+ YNP + VH A +L F+ +K+
Sbjct: 64 AADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKA 101
>gi|321466371|gb|EFX77367.1| hypothetical protein DAPPUDRAFT_27648 [Daphnia pulex]
Length = 106
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 50/88 (56%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L +L H W F+ PVD +K + DYF +I PMDLGTVK RL N Y + + + D+
Sbjct: 15 VLLALWNHKYAWPFHEPVDTIKHGLTDYFKVIKFPMDLGTVKKRLQNNYYWSATDCIRDI 74
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLF 201
F N YN P +V KM Q+L +F
Sbjct: 75 NNIFDNCYTYNDPSQDVVKMGQQLGKIF 102
>gi|365764189|gb|EHN05714.1| Bdf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 686
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +LK LM H + + F PVDPV +++P YF + +PMDLGT+ +L+ Y +
Sbjct: 321 CQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTME 380
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+F DVRL F N +NP V+ M L +F+ KW
Sbjct: 381 DFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 418
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPVKLDIP YF+ I +PMDL T++ +L+ Y V ++ D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 187 ENNVHKMAQELNNLFD 202
+ +MA+ + F+
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|302848828|ref|XP_002955945.1| hypothetical protein VOLCADRAFT_119228 [Volvox carteri f.
nagariensis]
gi|300258671|gb|EFJ42905.1| hypothetical protein VOLCADRAFT_119228 [Volvox carteri f.
nagariensis]
Length = 569
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 98 DKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTR 157
+ R ++ V CS LKS+ H + FN PVD + PDY IIS PMD T+K R
Sbjct: 77 NHRIRLAEVVQKHCSTALKSITQHKWAFPFNNPVDTARF--PDYPKIISSPMDFSTIKAR 134
Query: 158 LDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
D Y ++ +DV L FSNA YN P ++ + MAQ L + + K+
Sbjct: 135 QDGGYYRDPKDWWSDVMLVFSNAKRYNAPGSDCYLMAQTLQEVSEEKY 182
>gi|190405441|gb|EDV08708.1| protein BDF1 [Saccharomyces cerevisiae RM11-1a]
Length = 686
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +LK LM H + + F PVDPV +++P YF + +PMDLGT+ +L+ Y +
Sbjct: 321 CQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTME 380
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+F DVRL F N +NP V+ M L +F+ KW
Sbjct: 381 DFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 418
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPVKLDIP YF+ I +PMDL T++ +L+ Y V ++ D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 187 ENNVHKMAQELNNLFD 202
+ +MA+ + F+
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|154287696|ref|XP_001544643.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408284|gb|EDN03825.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 627
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPV L+IP Y SII KPMDL TV+T+L Y + E ADVRL F N +N P
Sbjct: 286 FYYPVDPVALNIPTYHSIIKKPMDLQTVQTKLQTGQYENAKEMEADVRLMFKNCYKFNIP 345
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKW 212
+ + + L +FD KW S + +W
Sbjct: 346 GDPTYNSGKSLEEVFDNKW-SQKRRW 370
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
F PVDPVKL+IP+Y II +PMDL T++ +L Y+ +D L N++ +N
Sbjct: 97 FFREPVDPVKLNIPNYPLIIKQPMDLRTIEEKLKAGSYTSLFAVTSDFDLMVDNSVTFNG 156
Query: 186 PENNVHKMAQELNNLFD 202
PE+ V L F+
Sbjct: 157 PEHVVSMEGANLKQSFE 173
>gi|428182776|gb|EKX51636.1| hypothetical protein GUITHDRAFT_49561, partial [Guillardia theta
CCMP2712]
Length = 81
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL-DRNLYSVSDEFVADVRLTFSNAMLYNP 185
F PVDPV+ PDYF +I++PMDLGTV+T+L D L+ +F AD++L F NAM YNP
Sbjct: 14 FLEPVDPVRDGCPDYFQVIARPMDLGTVQTKLRDAGLH----DFFADIKLVFDNAMCYNP 69
Query: 186 PENNVHKMAQEL 197
P +++H+ A+ L
Sbjct: 70 PSHSIHRQARRL 81
>gi|307206270|gb|EFN84335.1| Nucleosome-remodeling factor subunit NURF301 [Harpegnathos saltator]
Length = 3705
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + H + W F PVDP + PDY+ +I +PMDL T++ R++ Y EF+ D+
Sbjct: 2691 LIKQIQAHKSAWPFMEPVDPN--EAPDYYKVIKEPMDLQTIELRINDRSYKKLSEFIGDM 2748
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWS 213
F N YNP E+ K A+ L F K KSL EK+S
Sbjct: 2749 TKIFDNCRYYNPKESPFFKCAESLETYFVHKIKSLREKFS 2788
>gi|297742702|emb|CBI35336.3| unnamed protein product [Vitis vinifera]
Length = 421
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q IL+ +M H F PVD L + DY+ +I KPMD T+K ++ D Y
Sbjct: 143 LMRQFGTILRQIMQHKWAGPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGY 202
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
E ADVRL F NAM YN ++VH MA+ L F EEKW +PK
Sbjct: 203 KNVREICADVRLVFKNAMKYNDERHDVHVMAKTLLGKF-------EEKWLQLLPKV 251
>gi|259148377|emb|CAY81624.1| Bdf1p [Saccharomyces cerevisiae EC1118]
Length = 686
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +LK LM H + + F PVDPV +++P YF + +PMDLGT+ +L+ Y +
Sbjct: 321 CQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTME 380
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+F DVRL F N +NP V+ M L +F+ KW
Sbjct: 381 DFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 418
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPVKLDIP YF+ I +PMDL T++ +L+ Y V ++ D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 187 ENNVHKMAQELNNLFD 202
+ +MA+ + F+
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|207342738|gb|EDZ70407.1| YLR399Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 686
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +LK LM H + + F PVDPV +++P YF + +PMDLGT+ +L+ Y +
Sbjct: 321 CQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTME 380
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+F DVRL F N +NP V+ M L +F+ KW
Sbjct: 381 DFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 418
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPVKLDIP YF+ I +PMDL T++ +L+ Y V ++ D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 187 ENNVHKMAQELNNLFD 202
+ +MA+ + F+
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|392578386|gb|EIW71514.1| hypothetical protein TREMEDRAFT_73329 [Tremella mesenterica DSM 1558]
Length = 2067
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%)
Query: 115 LKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVR 174
L+ L H + ++F +PVDP++ ++P Y II KPMDL T++ RLD +Y+ +FV DV+
Sbjct: 1520 LQKLNAHRSSYLFRQPVDPIRENVPTYLDIIRKPMDLSTIRARLDNGMYTKRTDFVEDVK 1579
Query: 175 LTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSS 214
L SN +N + V K+ Q+ F+ W E SS
Sbjct: 1580 LIISNCYTFNGKASPVGKVCQDFEAHFNKLWSRTEATLSS 1619
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
+F RPV+P+ P Y I +PMDLGT+ ++D Y+ D+ L F+N +NP
Sbjct: 1873 IFARPVNPIADGCPTYLDEIKEPMDLGTITKKMDGRQYTTMGALAYDIELVFNNCWQFNP 1932
Query: 186 PENNVHKMAQELNNLFDIKW 205
P + A L ++ +W
Sbjct: 1933 P-GPITVCADTLERVYWQEW 1951
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 101 PKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISK--PMDLGTVKTRL 158
PKM S +L M F PVDPV L IP+YF II DL T+K+ +
Sbjct: 1957 PKMTADERKAMSALLAKSMKEQLSLFFREPVDPVALQIPNYFEIIPPEDARDLSTIKSNV 2016
Query: 159 DRNLYSVSDEFVADVRLTFSNAMLYN 184
++ Y+ + + DV L NA ++N
Sbjct: 2017 EKGKYATARDVDEDVELMLENARVFN 2042
>gi|426201896|gb|EKV51819.1| hypothetical protein AGABI2DRAFT_60502 [Agaricus bisporus var.
bisporus H97]
Length = 1353
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 62/108 (57%), Gaps = 12/108 (11%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL--------DRN- 161
C ++SL F RPVDPV L+IP YFSII +PMDL TV+ +L D N
Sbjct: 811 CQSTVRSLKKIKDAAPFLRPVDPVALNIPHYFSIIKQPMDLSTVERKLASSNPQKPDPNP 870
Query: 162 ---LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWK 206
Y+ +DEFV+DVRL F N + +N P++ V M + + +FD + K
Sbjct: 871 ENPRYNNADEFVSDVRLMFYNCLTFNGPDHAVTAMGKRVEEIFDKQIK 918
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 97 KDKRPKMDRGVTHQ---CSVILKSL---MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMD 150
K KR K D G Q C IL L + F PVD VK+D+P Y ++ KPMD
Sbjct: 1007 KSKRVK-DDGTAEQLKYCGKILSDLNRKQHYNVASPFYEPVDWVKMDLPMYPKVVKKPMD 1065
Query: 151 LGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
L T++ +LD N Y+ + +F +D +L N +NP V +L LF+ KWKSL
Sbjct: 1066 LSTMRRKLDNNEYAAAKDFYSDFKLMIKNCFTFNPVGTPVQIAGADLQRLFEEKWKSL 1123
>gi|407040562|gb|EKE40194.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 557
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS IL ++M + F VDP+ L+I DY+ I+ PMDL TV +L + LY ++F
Sbjct: 322 CSSILGAIMNNQESEPFKTEVDPIALNILDYYKIVKHPMDLETVSIKLSKGLYETKEDFK 381
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
D++L F NA +YN EN++H+ A L FD + S
Sbjct: 382 KDMKLIFENAKIYNSSENSIHQSAINLMKKFDKMFNS 418
>gi|323336416|gb|EGA77684.1| Bdf1p [Saccharomyces cerevisiae Vin13]
Length = 686
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +LK LM H + + F PVDPV +++P YF + +PMDLGT+ +L+ Y +
Sbjct: 321 CQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTME 380
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+F DVRL F N +NP V+ M L +F+ KW
Sbjct: 381 DFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 418
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPVKLDIP YF+ I +PMDL T++ +L+ Y V ++ D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 187 ENNVHKMAQELNNLFD 202
+ +MA+ + F+
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|19173489|ref|NP_597292.1| GENERAL TRANSCRIPTION FACTOR [Encephalitozoon cuniculi GB-M1]
gi|19171078|emb|CAD26468.1| GENERAL TRANSCRIPTION FACTOR [Encephalitozoon cuniculi GB-M1]
gi|449328789|gb|AGE95065.1| general transcription factor [Encephalitozoon cuniculi]
Length = 370
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 51/91 (56%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS IL L + F PVDPVKL IPDY I PMDL T++ +LD Y + F
Sbjct: 20 CSQILTRLKRNSNAPPFLEPVDPVKLGIPDYPEKIKHPMDLSTIRKKLDSKEYEGPEGFD 79
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLF 201
D+RL FSN YNPP VH+M + L ++
Sbjct: 80 GDMRLMFSNCYTYNPPGTVVHEMGKGLEAVY 110
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 111 CSVILKSLMMHPAGWVFNRP-VDPVKLD-IPDYFSIISKPMDLGTVKTRLDRNLYSVSDE 168
CS L L+ P +N P ++PV D +P Y+S+I +PMDL T++++L++ Y +E
Sbjct: 157 CSETLSDLV-KPKHKAYNWPFLEPVDGDLVPGYYSVIKEPMDLQTMRSKLEQRRYQSVEE 215
Query: 169 FVADVRLTFSNAMLYNPPENNVHKMAQEL 197
F D+ L N +N P V+ QE
Sbjct: 216 FGRDLELIVENCKKFNAPGTEVYVCGQEF 244
>gi|242769778|ref|XP_002341843.1| transcription regulator BDF1, putative [Talaromyces stipitatus ATCC
10500]
gi|218725039|gb|EED24456.1| transcription regulator BDF1, putative [Talaromyces stipitatus ATCC
10500]
Length = 798
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 111 CSVILKSLMMHPAGWV----FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVS 166
C IL + P W F PVDPV L+IP Y S+I KPMDL T++ +L Y +
Sbjct: 457 CQEILDEVH-KPKYWAIANPFYYPVDPVALNIPTYHSVIKKPMDLSTIQVKLKAGQYENA 515
Query: 167 DEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKW 212
EF ADVRL N +N P + +++ Q+ +F+ KW + + +W
Sbjct: 516 KEFEADVRLMLKNCFKFNIPGDPIYQAGQKFEEVFNSKW-ATKNRW 560
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 52/75 (69%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
+ PVDP+KL+IP YF++I++PMDL T++++L +N Y+ E +ADV L NA +N P
Sbjct: 282 YREPVDPIKLNIPTYFTVITEPMDLSTIESKLKKNQYNTVAEVIADVDLMAGNAAKFNGP 341
Query: 187 ENNVHKMAQELNNLF 201
E+ V + Q+L LF
Sbjct: 342 EHIVSQEGQKLKALF 356
>gi|354479445|ref|XP_003501920.1| PREDICTED: nucleosome-remodeling factor subunit BPTF-like [Cricetulus
griseus]
Length = 2741
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 2634 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQKRYYEKLTEFVADM 2691
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2692 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2726
>gi|345324456|ref|XP_001510508.2| PREDICTED: nucleosome-remodeling factor subunit BPTF [Ornithorhynchus
anatinus]
Length = 2846
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 2739 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQKRYYKKLTEFVADM 2796
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2797 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2831
>gi|67480061|ref|XP_655396.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56472529|gb|EAL50010.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449706339|gb|EMD46207.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 557
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
CS IL ++M + F VDP+ L+I DY+ I+ PMDL TV +L + LY ++F
Sbjct: 322 CSSILGAIMNNQESEPFKTEVDPIALNILDYYKIVKHPMDLETVSIKLSKGLYKTKEDFK 381
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
D++L F NA +YN EN++H+ A L FD + S
Sbjct: 382 KDMKLIFENAKIYNSSENSIHQSAINLMKKFDKMFNS 418
>gi|311664|emb|CAA79377.1| BDF1 [Saccharomyces cerevisiae]
Length = 687
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 47 SSVAESNQLMMSKPYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRG 106
SS E +++ +P +G K H + I P+ ++ PK KR +
Sbjct: 270 SSAQEDAPIVIRRPQTHNGRPKRTI--HPPKSKDIYPYESKK-------PKSKRLQQ--- 317
Query: 107 VTHQCSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
C +LK LM H + + F PVDPV +++P YF + +PMDLGT+ +L+ Y
Sbjct: 318 AMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQY 377
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
++F +VRL F N +NP V+ M L +F+ KW
Sbjct: 378 QTMEDFEREVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 419
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPVKLDIP YF+ I +PMDL T++ +L+ Y V ++ D L +N++ +N P
Sbjct: 174 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 233
Query: 187 ENNVHKMAQELNNLFD 202
+ +MA+ + F+
Sbjct: 234 NAGISQMARNIQASFE 249
>gi|392332179|ref|XP_003752499.1| PREDICTED: nucleosome-remodeling factor subunit BPTF [Rattus
norvegicus]
gi|392351698|ref|XP_003750996.1| PREDICTED: nucleosome-remodeling factor subunit BPTF [Rattus
norvegicus]
Length = 2861
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 2754 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQKRYYEKLTEFVADM 2811
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2812 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2846
>gi|145512850|ref|XP_001442336.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409689|emb|CAK74939.1| unnamed protein product [Paramecium tetraurelia]
Length = 478
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 63 SSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHP 122
++GG + + ++ S IL A E I+ + K D Q I+ +
Sbjct: 332 TNGGFQQFSIQYPDVASLIL-----NADEFIDENMINQFKEDEAWEKQAKKIIAQIWKAK 386
Query: 123 AGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
++F PVD K +I DYF II KPMD GT+K +L+ N Y EF AD+ L F N +
Sbjct: 387 GAYLFREPVDQQKFNITDYFDIIKKPMDFGTIKNKLNVNAYKTLREFHADMMLVFDNCGI 446
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKIL 225
YN +N + ++ + N ++ S + + GL K L
Sbjct: 447 YNGTQNAIGQIGVNIRN-----------EYLSLIEQNGLNKYL 478
>gi|323347321|gb|EGA81594.1| Bdf1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 635
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLMM--HPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C +LK LM H + + F PVDPV +++P YF + +PMDLGT+ +L+ Y +
Sbjct: 321 CQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQTME 380
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
+F DVRL F N +NP V+ M L +F+ KW
Sbjct: 381 DFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 418
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPVKLDIP YF+ I +PMDL T++ +L+ Y V ++ D L +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 187 ENNVHKMAQELNNLFD 202
+ +MA+ + F+
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|38344163|emb|CAE03494.2| OSJNBa0053K19.2 [Oryza sativa Japonica Group]
gi|38345711|emb|CAD41833.2| OSJNBb0085C12.13 [Oryza sativa Japonica Group]
Length = 299
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C IL L FN PV+ +L + DY ++I PMDLGTV+ L Y D+F
Sbjct: 4 RCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDDF 63
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
AD+RLTFSNA+ YNP + VH A +L F+ +K+
Sbjct: 64 AADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKA 101
>gi|413934198|gb|AFW68749.1| hypothetical protein ZEAMMB73_779086 [Zea mays]
Length = 259
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 65/130 (50%), Gaps = 20/130 (15%)
Query: 74 HSKERSSILP-FNKRQAQEVIEGPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVD 132
HSK RSS P +N + Q +T LK+L HP W F PVD
Sbjct: 133 HSKSRSSFSPDYNTYRQQ----------------LTTLMQTALKNLNEHPDAWPFKEPVD 176
Query: 133 PVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDE-FVADVRLTFSNAMLYNPPENNVH 191
D+PDY+ II P+DL T+ R+D Y V+ E FVAD++ FSNA YN P+ +
Sbjct: 177 --SRDVPDYYDIIKDPIDLRTMLRRVDSEQYYVTLEMFVADMKRMFSNARTYNSPDTIYY 234
Query: 192 KMAQELNNLF 201
K A L N F
Sbjct: 235 KCATRLENFF 244
>gi|194747342|ref|XP_001956111.1| GF24755 [Drosophila ananassae]
gi|190623393|gb|EDV38917.1| GF24755 [Drosophila ananassae]
Length = 2758
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
+++K++ H + W F PVDP + PDY+ +I +PMDL ++++L+ N Y+ EF+ D
Sbjct: 2656 IVIKAIQSHKSAWPFMEPVDPD--EAPDYYKVIKEPMDLKQMESKLESNAYTKLAEFIGD 2713
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
+ F N YNP E++ +K A+ L + F K K+ E
Sbjct: 2714 MTKIFDNCRYYNPKESSFYKCAEALESYFVQKIKTFRE 2751
>gi|125591685|gb|EAZ32035.1| hypothetical protein OsJ_16213 [Oryza sativa Japonica Group]
Length = 337
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 56/98 (57%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C IL L FN PV+ +L + DY ++I PMDLGTV+ L Y D+F
Sbjct: 4 RCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDDF 63
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
ADVRLTFSNA+ YNP + VH A +L F+ +K+
Sbjct: 64 AADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKA 101
>gi|156087084|ref|XP_001610949.1| bromodomain/ankyrin repeat containing protein [Babesia bovis T2Bo]
gi|154798202|gb|EDO07381.1| bromodomain/ankyrin repeat containing protein [Babesia bovis]
Length = 486
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 109 HQCSV-ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
HQ + +L S+ G+VF RPVDP K + PDYF I+ KPM +K ++ RN Y+
Sbjct: 243 HQVGMSLLSSMSKQKGGYVFERPVDPKKQNCPDYFDIVEKPMSFSCIKAKIRRNAYTKPQ 302
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKAGLGKILSG 227
EF+ D +L F N YN P+ + ++ + + F + K E + S + K L L
Sbjct: 303 EFLDDCQLVFDNCFKYNKPDTWIAQIGRTIEAFFKNQVK--EVGFESFIHKHSLMDTLMD 360
Query: 228 K---MMEVNDTRQN 238
K +E ND N
Sbjct: 361 KAKIYVEANDKEPN 374
>gi|110590690|pdb|1X0J|A Chain A, Crystal Structure Analysis Of The N-Terminal Bromodomain
Of Human Brd2
gi|110590691|pdb|1X0J|B Chain B, Crystal Structure Analysis Of The N-Terminal Bromodomain
Of Human Brd2
gi|110590692|pdb|1X0J|C Chain C, Crystal Structure Analysis Of The N-Terminal Bromodomain
Of Human Brd2
gi|157834811|pdb|2DVQ|A Chain A, Crystal Structure Analysis Of The N-Terminal Bromodomain
Of Human Brd2 Complexed With Acetylated Histone H4
Peptide
gi|157834812|pdb|2DVQ|B Chain B, Crystal Structure Analysis Of The N-Terminal Bromodomain
Of Human Brd2 Complexed With Acetylated Histone H4
Peptide
gi|157834813|pdb|2DVQ|C Chain C, Crystal Structure Analysis Of The N-Terminal Bromodomain
Of Human Brd2 Complexed With Acetylated Histone H4
Peptide
gi|157834816|pdb|2DVR|A Chain A, Crystal Structure Analysis Of The N-Terminal Bromodomain
Of Human Brd2 Complexed With Acetylated Histone H4
Peptide
gi|157834817|pdb|2DVR|B Chain B, Crystal Structure Analysis Of The N-Terminal Bromodomain
Of Human Brd2 Complexed With Acetylated Histone H4
Peptide
gi|157834818|pdb|2DVR|C Chain C, Crystal Structure Analysis Of The N-Terminal Bromodomain
Of Human Brd2 Complexed With Acetylated Histone H4
Peptide
gi|157834821|pdb|2DVS|A Chain A, Crystal Structure Analysis Of The N-Terminal Bromodomain
Of Human Brd2 Complexed With Acetylated Histone H4
Peptide
gi|157834822|pdb|2DVS|B Chain B, Crystal Structure Analysis Of The N-Terminal Bromodomain
Of Human Brd2 Complexed With Acetylated Histone H4
Peptide
gi|157834823|pdb|2DVS|C Chain C, Crystal Structure Analysis Of The N-Terminal Bromodomain
Of Human Brd2 Complexed With Acetylated Histone H4
Peptide
Length = 122
Score = 80.5 bits (197), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+ K+L H W F +PVD VKL +PDY II +P D GT+K RL+ N Y + E D
Sbjct: 13 VVXKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPXDXGTIKRRLENNYYWAASECXQD 72
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPK 218
F+N +YN P +++ AQ L +F K S E++ +PK
Sbjct: 73 FNTXFTNCYIYNKPTDDIVLXAQTLEKIFLQKVASXPQEEQELVVTIPK 121
>gi|149054606|gb|EDM06423.1| rCG32598 [Rattus norvegicus]
Length = 2710
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 2613 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQKRYYEKLTEFVADM 2670
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2671 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2705
>gi|353243946|emb|CCA75421.1| related to BDF1-Sporulation protein [Piriformospora indica DSM
11827]
Length = 534
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 125 WVFN--RPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAML 182
WVF RPVD + P+Y +I PMDLGT++ +L +Y ++EF DV+L F+N
Sbjct: 314 WVFPFLRPVD--LSEFPNYLEVIKNPMDLGTIRDKLSHAVYGTAEEFHKDVKLMFTNCYT 371
Query: 183 YNPPENNVHKMAQELNNLFDIKWKSL------EEKWSSEVPKAGLGKILSGKMMEVNDTR 236
YNP V A++L +FD KWK L +EK S K +G+ G ++ TR
Sbjct: 372 YNPDWAPVWGYAKDLEKVFDSKWKELPLEVEVQEKSSRRDAKKHVGE---GPVLTQLRTR 428
Query: 237 QNCPKTPPLHSTLSS 251
N KT P +ST SS
Sbjct: 429 PN--KTKPRNSTASS 441
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 115 LKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN--LYSVSDEFVAD 172
LK+LM HPA F PVDPV+ +IP YF +I +PMDLGT++++L + Y FV D
Sbjct: 140 LKALMKHPAAVPFLVPVDPVQANIPTYFDVIKQPMDLGTIQSKLMASPCAYDTLQSFVND 199
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
V L F N +N +++ + +L F + + L E
Sbjct: 200 VDLVFDNCYRFNGLAHSISHLGVQLQTEFQRQMRQLPE 237
>gi|189031512|gb|ACD74899.1| BDF2 [Pneumocystis carinii]
Length = 317
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
IL+ L + FN+PVDP+KL+IP Y +II+ PMD GT+ +L Y D F DV
Sbjct: 181 ILRQLRRNRDARPFNQPVDPIKLNIPSYPTIITHPMDFGTIDKKLSSKQYETVDXFKKDV 240
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLF 201
L F+N +N E+ + MA+ L N+F
Sbjct: 241 ELVFTNCFTFNGEESPISIMARNLKNIF 268
>gi|168038855|ref|XP_001771915.1| single bromodomain-containing protein [Physcomitrella patens subsp.
patens]
gi|162676866|gb|EDQ63344.1| single bromodomain-containing protein [Physcomitrella patens subsp.
patens]
Length = 672
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 115 LKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRN-LYSVSDEFVADV 173
LK +M FN+PVDPVKL IPDYF ++ +PMDLGT++ RL++ +Y+ D+ DV
Sbjct: 271 LKRIMKMKEAGPFNKPVDPVKLGIPDYFEVVKRPMDLGTIRDRLEKGEVYNTVDDVFEDV 330
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLF 201
L +SN YN + + + + L + F
Sbjct: 331 ALVWSNCRTYNDDGDPIMEFLKNLESTF 358
>gi|449267571|gb|EMC78498.1| Nucleosome-remodeling factor subunit BPTF, partial [Columba livia]
Length = 909
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 802 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERILKRYYKKVTEFVADM 859
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
F N YNP ++ ++ A+ L + F K K +
Sbjct: 860 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGFK 895
>gi|410075149|ref|XP_003955157.1| hypothetical protein KAFR_0A05870 [Kazachstania africana CBS 2517]
gi|372461739|emb|CCF56022.1| hypothetical protein KAFR_0A05870 [Kazachstania africana CBS 2517]
Length = 647
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 94 EGPKDKRPKMDRGVTHQCSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMD 150
E PK K K+ + + CS I+K L + F PVDPV +++P YF + PMD
Sbjct: 267 ENPKPKSKKLQQAMKF-CSNIVKELTSKKYSSFNYPFLEPVDPVAMNLPTYFDFVKDPMD 325
Query: 151 LGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
LG++ +L Y+ D+F +D+RL F+N +NP V+ M L +F+ KW
Sbjct: 326 LGSIAKKLSNWEYNSMDQFESDIRLVFNNCYAFNPDGTIVNMMGHRLEEIFNNKW 380
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVD V L+IP Y++ I +PMDL T++ +L+ N Y+ +E + D L N + +N
Sbjct: 128 FLKPVDIVALNIPLYYNYIDRPMDLSTMEKKLNVNAYATPEEIMNDFNLMVHNCIKFNGQ 187
Query: 187 ENNVHKMAQELNNLFD 202
+ +MA+ + F+
Sbjct: 188 TAAIAQMARNIQAAFE 203
>gi|68051321|gb|AAY84924.1| IP09966p [Drosophila melanogaster]
Length = 276
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C VI+K L WVF P+DP L + DY I+ +PMDL TV+ RL+ Y +
Sbjct: 25 CKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSAA 84
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+F D+RL F N LY P++ + MA++L +F+
Sbjct: 85 DFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFE 119
>gi|449478905|ref|XP_004177038.1| PREDICTED: LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit
BPTF [Taeniopygia guttata]
Length = 2964
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 2857 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERILKRYYKKVTEFVADM 2914
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2915 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2949
>gi|195999462|ref|XP_002109599.1| hypothetical protein TRIADDRAFT_53787 [Trichoplax adhaerens]
gi|190587723|gb|EDV27765.1| hypothetical protein TRIADDRAFT_53787 [Trichoplax adhaerens]
Length = 1866
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFV 170
C +IL L H GW FN PV D P Y +IS PMDL T+K +L YS +F+
Sbjct: 1767 CRIILNELEQHEDGWPFNEPVSDK--DCPTYHEVISNPMDLRTMKNKLRDLQYSSHSDFL 1824
Query: 171 ADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
D+ L FSN L+N ++ V Q L+ F+ +W L
Sbjct: 1825 VDIGLIFSNCKLFNEDDSEVGIAGQNLSKFFEERWAEL 1862
>gi|125591682|gb|EAZ32032.1| hypothetical protein OsJ_16210 [Oryza sativa Japonica Group]
Length = 515
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C IL L FN PV+ +L + DY ++I PMDLGTV+ L Y D+F
Sbjct: 4 RCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDDF 63
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
AD+RLTFSNA+ YNP + VH A +L F+ +K+
Sbjct: 64 AADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKA 101
>gi|140969817|ref|NP_789820.2| nucleosome-remodeling factor subunit BPTF [Mus musculus]
Length = 2921
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 2814 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQKRYYEKLTEFVADM 2871
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
F N YNP + ++ A+ L + F K K +
Sbjct: 2872 TKIFDNCRYYNPRDTPFYQCAEVLESFFVQKLKGFK 2907
>gi|24659254|ref|NP_726307.1| CG30417 [Drosophila melanogaster]
gi|7291557|gb|AAF46981.1| CG30417 [Drosophila melanogaster]
gi|66571202|gb|AAY51566.1| IP01291p [Drosophila melanogaster]
gi|220943344|gb|ACL84215.1| CG30417-PA [synthetic construct]
gi|220953316|gb|ACL89201.1| CG30417-PA [synthetic construct]
Length = 268
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 111 CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C VI+K L WVF P+DP L + DY I+ +PMDL TV+ RL+ Y +
Sbjct: 17 CKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSAA 76
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+F D+RL F N LY P++ + MA++L +F+
Sbjct: 77 DFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFE 111
>gi|334322958|ref|XP_001379257.2| PREDICTED: nucleosome-remodeling factor subunit BPTF, partial
[Monodelphis domestica]
Length = 2815
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 2708 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQKRYYKKLTEFVADM 2765
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2766 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2800
>gi|258567404|ref|XP_002584446.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905892|gb|EEP80293.1| predicted protein [Uncinocarpus reesii 1704]
Length = 807
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPV L+IP Y +II KPMDL T++T+L Y S E DVRL F N +N P
Sbjct: 480 FYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQTGQYENSKEMENDVRLMFRNCYKFNIP 539
Query: 187 ENNVHKMAQELNNLFDIKW 205
+ + ++L +FD KW
Sbjct: 540 GDPTYNAGKKLEEIFDSKW 558
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
F PVDPVKL+IP+Y II PMD+ T++ ++ Y +DE +AD L N + +N
Sbjct: 278 FFRTPVDPVKLNIPNYPLIIKHPMDMHTMEEKVKHGAYKTADEVIADFNLIVDNCVTFNG 337
Query: 186 PENNV 190
PE+ V
Sbjct: 338 PEHVV 342
>gi|159491100|ref|XP_001703511.1| Ring3 protein [Chlamydomonas reinhardtii]
gi|158280435|gb|EDP06193.1| Ring3 protein [Chlamydomonas reinhardtii]
Length = 429
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 98 DKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTR 157
++R ++ V CS LK++M H + FN PVD + DY +++ PMD TV+ R
Sbjct: 80 NRRARLVEIVQKHCSQALKAIMQHKWAFPFNTPVDTSRF--VDYLKVVATPMDFSTVRNR 137
Query: 158 LDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
+ Y ++ +DV L FSNA YN P ++ H MAQ L + + K++ L
Sbjct: 138 TEAGYYRDPKDWWSDVMLVFSNAKRYNAPGSDCHLMAQTLQEVSEEKYEKL 188
>gi|395533163|ref|XP_003768631.1| PREDICTED: nucleosome-remodeling factor subunit BPTF [Sarcophilus
harrisii]
Length = 3074
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 2967 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQKRYYKKLTEFVADM 3024
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 3025 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 3059
>gi|116309916|emb|CAH66950.1| B0809H07.5 [Oryza sativa Indica Group]
Length = 337
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C IL L FN PV+ +L + DY ++I PMDLGTV+ L Y D+F
Sbjct: 4 RCDQILVKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDDF 63
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
AD+RLTFSNA+ YNP + VH A +L F+ +K+
Sbjct: 64 AADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKA 101
>gi|367014125|ref|XP_003681562.1| hypothetical protein TDEL_0E01080 [Torulaspora delbrueckii]
gi|359749223|emb|CCE92351.1| hypothetical protein TDEL_0E01080 [Torulaspora delbrueckii]
Length = 616
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
CS ++K L H A + F PVDPV L+ P YF + +PMDLGTV L+ Y +
Sbjct: 255 CSGVVKELTSKKHAAFNYPFLEPVDPVALNCPTYFDYVKEPMDLGTVSKNLNNWKYQTLE 314
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
EF DVRL F N +NP V++M L ++F+ KW
Sbjct: 315 EFERDVRLVFENCYKFNPEGTIVNQMGHRLEDIFNSKW 352
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDPV L+IP YF + KPMDLGT++ +L + Y +E AD L SN + +N
Sbjct: 107 FLKPVDPVALNIPKYFETVKKPMDLGTIERKLQNDSYGQPEEVNADFDLMVSNCVTFNGA 166
Query: 187 ENNVHKMAQELNNLFD 202
+ + +MA+ + F+
Sbjct: 167 QATISQMARNIQAAFE 182
>gi|148702374|gb|EDL34321.1| mCG3307 [Mus musculus]
Length = 2808
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 2711 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQKRYYEKLTEFVADM 2768
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP + ++ A+ L + F K K
Sbjct: 2769 TKIFDNCRYYNPRDTPFYQCAEVLESFFVQKLKGF 2803
>gi|449550736|gb|EMD41700.1| hypothetical protein CERSUDRAFT_41693 [Ceriporiopsis subvermispora B]
Length = 1399
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 111 CSVILKSL-------MMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
C +LK L + HP F PVD VKLDIP Y I+ +PMDL T+K +L Y
Sbjct: 1053 CEKVLKDLHRKQHYNIAHP----FYEPVDWVKLDIPSYPKIVKRPMDLSTMKRKLTNGDY 1108
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
S + F D +L N + +NP +N VH+ L+ LF+ KW L
Sbjct: 1109 STAQAFYDDFKLMIRNCITFNPAKNPVHEAGVTLDRLFEEKWHQL 1153
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 12/110 (10%)
Query: 111 CSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL--------DRN- 161
C +++L F +PVDP+ L+IP Y SII PMD TV+ +L D N
Sbjct: 853 CMSTIRTLKKMKDAGPFLQPVDPILLNIPHYPSIIKNPMDFSTVERKLQASSPVKPDSNP 912
Query: 162 ---LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
Y +D+FVADVRL F+N++ +N P++ V M + + N+FD + K +
Sbjct: 913 ANPRYYSTDDFVADVRLIFTNSVTFNGPDHAVTLMGKRVENVFDKQIKQM 962
>gi|194864549|ref|XP_001970994.1| GG14675 [Drosophila erecta]
gi|190652777|gb|EDV50020.1| GG14675 [Drosophila erecta]
Length = 2572
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + +H + W F PVDP + PDY+ +I +PMDL ++ +L+ N Y+ EF+ D+
Sbjct: 2471 LIKQMQLHKSAWPFMEPVDPK--EAPDYYKVIKEPMDLKRMEIKLESNTYTKLAEFIGDM 2528
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
F N YNP E++ +K A+ L + F K K+ E
Sbjct: 2529 TKIFDNCRYYNPKESSFYKCAEALESFFVQKIKNFRE 2565
>gi|10177440|dbj|BAB10736.1| unnamed protein product [Arabidopsis thaliana]
Length = 569
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 105/193 (54%), Gaps = 27/193 (13%)
Query: 393 LCPSSQLTPPATDSASAEEWTTPLLDVQMSPKKALRAAMLKSRFADTILKAQQRTLLDHG 452
L P + PP E +P SP K RAA LK+RFADTI+KA+++ G
Sbjct: 45 LVPDEETAPP-------ERQISP-----DSPDKRYRAAFLKNRFADTIMKAREKAFT-KG 91
Query: 453 DKADPVKLQQEKERLEQRQREEKARIE---AQIKAAEAASRMKAEIELKKQREKEREAAR 509
+K DP KL+ E+E E+R REEK R++ + A ++ +A + +++RE+EREAAR
Sbjct: 92 EKGDPEKLRIEREEFEKRLREEKERLQAEAKAAEEARRKAKAEAAEKARREREQEREAAR 151
Query: 510 VALQKMERTVEIEHNLEILKELEMLSGCCLSPHLLNGS-EAQKRAFKE-----AHFK--- 560
ALQKME+TVEI + +++L+ML L S E F E FK
Sbjct: 152 QALQKMEKTVEINEGIRFMEDLQMLRATGTEGDQLPTSMEVMSPKFSEDMLGLGSFKMES 211
Query: 561 --NPLERIGLFMK 571
NPLE +GL+MK
Sbjct: 212 NSNPLEHLGLYMK 224
>gi|270301390|gb|ACZ69563.1| bromodomain PHD finger transcription factor splice variant [Mus
musculus]
Length = 2640
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 2532 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERIQKRYYEKLTEFVADM 2589
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
F N YNP + ++ A+ L + F K K +
Sbjct: 2590 TKIFDNCRYYNPRDTPFYQCAEVLESFFVQKLKGFK 2625
>gi|357118940|ref|XP_003561205.1| PREDICTED: transcription factor GTE1-like [Brachypodium distachyon]
Length = 343
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 107 VTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---DRNLY 163
+ Q I++++ H F +PVD V L + DY+ II+KPMD T++ ++ D Y
Sbjct: 76 LMRQFGGIIRTVTNHDWAEPFLKPVDVVGLQLDDYYKIITKPMDFSTIRNKMEGKDGTKY 135
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
+ E +DVRL F+NAM YN ++VH MA+ L F+ KW L K +E
Sbjct: 136 NNVREIYSDVRLIFANAMKYNDEHHDVHIMAKLLLERFEEKWLHLLPKVENE 187
>gi|297723469|ref|NP_001174098.1| Os04g0622700 [Oryza sativa Japonica Group]
gi|255675790|dbj|BAH92826.1| Os04g0622700 [Oryza sativa Japonica Group]
Length = 355
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%)
Query: 110 QCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEF 169
+C IL L FN PV+ +L + DY ++I PMDLGTV+ L Y D+F
Sbjct: 4 RCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDDF 63
Query: 170 VADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKS 207
AD+RLTFSNA+ YNP + VH A +L F+ +K+
Sbjct: 64 AADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKA 101
>gi|30046988|gb|AAH50566.1| BPTF protein [Homo sapiens]
Length = 240
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ R Y EFVAD+
Sbjct: 133 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM 190
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 191 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 225
>gi|407917747|gb|EKG11050.1| hypothetical protein MPH_11793 [Macrophomina phaseolina MS6]
Length = 897
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
Query: 119 MMHPA----GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVR 174
MM P + F +PVDPV L+IP Y II KPMDLGTV++RL Y+ + + AD+
Sbjct: 551 MMKPKYRDFSYPFLQPVDPVALNIPQYLKIIKKPMDLGTVQSRLKHGEYTSAKDAKADLD 610
Query: 175 LTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSE 215
L F+N +NP ++V+KM L +++ W+ E W E
Sbjct: 611 LIFANCYKFNPEGDDVNKMGHMLEDVYRRAWEKKAE-WMEE 650
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 126 VFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNP 185
F PVDPV L+IP Y +I+ PMDL T++ + Y D F++D L N +L+N
Sbjct: 362 AFLHPVDPVALNIPHYPQVITNPMDLSTLEAKHKEKQYQSVDAFMSDFYLMIDNCVLFN- 420
Query: 186 PENNVHKMAQELNNL 200
H +AQ NL
Sbjct: 421 --GIQHPIAQSAWNL 433
>gi|737920|prf||1923401A protein CBP
Length = 2441
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 122 PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAM 181
P F +PVDP L IPDYF I+ PMDL T+K +LD Y ++V DVRL F+NA
Sbjct: 1107 PESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVRLMFNNAW 1166
Query: 182 LYNPPENNVHKMAQELNNLFD 202
LYN + V+K +L +F+
Sbjct: 1167 LYNRKTSRVYKFCSKLAEVFE 1187
>gi|357623911|gb|EHJ74876.1| hypothetical protein KGM_02278 [Danaus plexippus]
Length = 1657
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 11/170 (6%)
Query: 40 VENWRHSSSVAESNQLMMSKPYRSSGGKKMIASEHSKERSSILPFNKRQAQEVIEGPKDK 99
+ +W VA+ ++L S Y S +A + ++P Q GP
Sbjct: 1101 IRSWEQVDVVAQYHELAAS--YHSDDEDDDVAHKKRPTPRGVVPHTGHQRA----GPPRA 1154
Query: 100 RPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLD 159
P D CS +L+ L F PV + PDY S+++ PMDLGTV RL
Sbjct: 1155 APPRD--WRSACSALLQELTASADAEPFRHPVSSAQ--APDYRSVVTHPMDLGTVSRRLS 1210
Query: 160 RNLYSVSDEFVADVRLTFSNAMLYNP-PENNVHKMAQELNNLFDIKWKSL 208
+ YS SD+ ADVRL F+N+ LYN + ++ M L++LF+ W L
Sbjct: 1211 QGHYSRSDQLAADVRLVFANSRLYNTNKRSRIYSMTVRLSSLFESLWSRL 1260
>gi|353236338|emb|CCA68335.1| related to putative histone acetylase [Piriformospora indica DSM
11827]
Length = 635
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 115 LKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVR 174
L++L H W F PV+ K D+PDY+ I PMDL T++T+L+ Y+ D FVADVR
Sbjct: 539 LRALQAHQQSWPFRVPVN--KQDVPDYYEFIKNPMDLHTMQTKLEGGKYAQVDAFVADVR 596
Query: 175 LTFSNAMLYNPPENNVHKMAQELNNLFDIK-WKSLEEK 211
N +LYNP ++ K A +LN F+ K L EK
Sbjct: 597 AIVENCLLYNPQDSVYAKAAIKLNRYFETSLLKELMEK 634
>gi|392574685|gb|EIW67820.1| hypothetical protein TREMEDRAFT_39966 [Tremella mesenterica DSM 1558]
Length = 1243
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVD + D+P+Y +I KP+DL +K +LD +Y E AD++L NA YNPP
Sbjct: 922 FLFPVDQIIADLPEYAKVIKKPIDLHIIKAKLDDGVYEDVSEVNADMKLMIRNATTYNPP 981
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEK 211
+ VH AQ+L L++ KW+ L K
Sbjct: 982 NHAVHTAAQQLQRLWEEKWRGLPPK 1006
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 115 LKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRL---------------- 158
+++L +P G F PVDP+K IP YF +I+KPMDL TV+T+L
Sbjct: 712 VRALKKNPNGVSFLEPVDPIKYGIPTYFQVIAKPMDLATVETKLIVSDPRGPPKDKSKMS 771
Query: 159 ----DRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQEL 197
+ Y E V DVR + N ++N P + V A +L
Sbjct: 772 KWDTSKGTYGSVSEVVDDVRQIWENTRMFNGPTHVVSLAADKL 814
>gi|219115425|ref|XP_002178508.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410243|gb|EEC50173.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1386
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 30/200 (15%)
Query: 34 GQQQSHVENWR-------HSSSVAESNQLMMSKPYRSSGGKKMIASEHSKERSSILP--- 83
G+ VE +R SS+ + ++ S ++S +A+E SS LP
Sbjct: 727 GKTGGQVELYRMYPPERLSSSATPRTGSVLASTSVKASDA---VAAEPHPTGSSRLPGPL 783
Query: 84 ----FNKRQAQEVIEGPK-----DKRPKMDRGVTHQCSVILKSLMMHPA----GWVFNRP 130
++R++ +++ P D ++ R V +CS IL+ +MH G F P
Sbjct: 784 QPSSLHRRESTRLVKLPSRLEDDDPSAQLSR-VMEKCSQILR--IMHEKDVELGAFFGEP 840
Query: 131 VDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYN-PPENN 189
VDPV L IP Y +I +PMDL T++ RL+ + + ++F VRL F NAM++N P +
Sbjct: 841 VDPVALGIPTYHQVIKEPMDLKTIRRRLEADEINSPEKFARLVRLVFENAMMFNIDPAHA 900
Query: 190 VHKMAQELNNLFDIKWKSLE 209
VH+ A+ L F+ K++ +E
Sbjct: 901 VHQSARNLLIQFNTKFRDVE 920
>gi|195148234|ref|XP_002015079.1| GL19519 [Drosophila persimilis]
gi|194107032|gb|EDW29075.1| GL19519 [Drosophila persimilis]
Length = 486
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ IL L H A W F PVD L + DY++II PMDLGTVK +LD +Y +
Sbjct: 119 CNEILMVLFSKKHSAYAWPFYEPVDAQNLGLYDYYNIIKTPMDLGTVKQKLDNRVYKSAS 178
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
F AD+RL FSN YNP +++ M ++L F++ +
Sbjct: 179 AFAADMRLIFSNCYKYNPVHHDIVIMCEKLQLAFEMLY 216
>gi|435855|gb|AAB28651.1| CREB-binding protein [Mus sp.]
Length = 2441
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 122 PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAM 181
P F +PVDP L IPDYF I+ PMDL T+K +LD Y ++V DVRL F+NA
Sbjct: 1107 PESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVRLMFNNAW 1166
Query: 182 LYNPPENNVHKMAQELNNLFD 202
LYN + V+K +L +F+
Sbjct: 1167 LYNRKTSRVYKFCSKLAEVFE 1187
>gi|333361102|pdb|3AQA|A Chain A, Crystal Structure Of The Human Brd2 Bd1 Bromodomain In
Complex With A Brd2-Interactive Compound, Bic1
gi|333361103|pdb|3AQA|B Chain B, Crystal Structure Of The Human Brd2 Bd1 Bromodomain In
Complex With A Brd2-Interactive Compound, Bic1
gi|333361104|pdb|3AQA|C Chain C, Crystal Structure Of The Human Brd2 Bd1 Bromodomain In
Complex With A Brd2-Interactive Compound, Bic1
Length = 128
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 113 VILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVAD 172
V+ K+L H W F +PVD VKL +PDY II +P D GT+K RL+ N Y + E D
Sbjct: 19 VVXKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPXDXGTIKRRLENNYYWAASECXQD 78
Query: 173 VRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL---EEKWSSEVPK 218
F+N +YN P +++ AQ L +F K S E++ +PK
Sbjct: 79 FNTXFTNCYIYNKPTDDIVLXAQTLEKIFLQKVASXPQEEQELVVTIPK 127
>gi|403214547|emb|CCK69048.1| hypothetical protein KNAG_0B06180 [Kazachstania naganishii CBS
8797]
Length = 654
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 74 HSKERSSILPF-NKRQAQEVIEGPKDKRPKMDRGVTHQCSVI--LKSLMMHPAGWVFNRP 130
H + I P+ NKR PK K K+ + + + SV+ L + + F P
Sbjct: 265 HPPKSKDIYPYENKR--------PKSK--KLQQAMKYCVSVVKELTNKKYASFNYPFLEP 314
Query: 131 VDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNV 190
VDPV +++P YF + +PMDLGT+ +L Y +EF AD+RL F N +NP V
Sbjct: 315 VDPVSMNLPTYFDYVKEPMDLGTISKKLSNWEYQTMEEFEADIRLVFKNCYSFNPDGTIV 374
Query: 191 HKMAQELNNLFDIKW 205
+ M L +F+ KW
Sbjct: 375 NMMGHRLEEVFNSKW 389
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVD V L++P YF+ I +PMDL TV+ +L+ N Y + D L N + +N P
Sbjct: 139 FLQPVDTVALNLPLYFNYIKRPMDLSTVERKLNLNAYETPESVTEDFNLMVDNCVKFNGP 198
Query: 187 ENNVHKMAQELNNLFD 202
+ + +MA+ + F+
Sbjct: 199 ASAIAQMARNIQASFE 214
>gi|363740784|ref|XP_003642377.1| PREDICTED: nucleosome-remodeling factor subunit BPTF, partial [Gallus
gallus]
Length = 2896
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+ +I +PMDL T++ R+ + Y EFVAD+
Sbjct: 2789 VLRSLQAHKMAWPFLEPVDPN--DAPDYYGVIKEPMDLATMEERILKRYYKKVTEFVADM 2846
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
F N YNP ++ ++ A+ L + F K K
Sbjct: 2847 TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 2881
>gi|195011484|ref|XP_001983171.1| GH15750 [Drosophila grimshawi]
gi|193896653|gb|EDV95519.1| GH15750 [Drosophila grimshawi]
Length = 2706
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + H + W F PVDP + PDY+ +I +PMDL ++++L+ N Y+ EF+ D+
Sbjct: 2605 LIKQIQSHKSAWPFMEPVDPE--EAPDYYKVIKEPMDLKQMESKLESNTYTKLAEFIGDM 2662
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
F N YNP E++ +K A+ L + F K KS E
Sbjct: 2663 TKIFDNCRYYNPKESSFYKCAEALESFFVQKIKSFRE 2699
>gi|405978367|gb|EKC42766.1| CREB-binding protein [Crassostrea gigas]
Length = 2101
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 122 PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAM 181
P F +PVDPV L+IPDYF I+ KPMDL T++ +LD Y+ ++ DV L F NA
Sbjct: 864 PESMPFRQPVDPVMLNIPDYFDIVKKPMDLSTIRRKLDTGQYTDPWQYCDDVWLMFDNAW 923
Query: 182 LYNPPENNVHKMAQELNNLFD 202
LYN + V+K + +L +F+
Sbjct: 924 LYNRKTSRVYKYSSKLAEVFE 944
>gi|24654644|ref|NP_728507.1| enhancer of bithorax, isoform A [Drosophila melanogaster]
gi|281360561|ref|NP_001163304.1| enhancer of bithorax, isoform E [Drosophila melanogaster]
gi|442629134|ref|NP_001261190.1| enhancer of bithorax, isoform J [Drosophila melanogaster]
gi|74872079|sp|Q9W0T1.2|NU301_DROME RecName: Full=Nucleosome-remodeling factor subunit NURF301; AltName:
Full=Enhancer of bithorax; AltName:
Full=Nucleosome-remodeling factor 215 kDa subunit;
Short=NURF-215
gi|23092682|gb|AAN11431.1| enhancer of bithorax, isoform A [Drosophila melanogaster]
gi|272454980|gb|ACZ94576.1| enhancer of bithorax, isoform E [Drosophila melanogaster]
gi|440215053|gb|AGB93885.1| enhancer of bithorax, isoform J [Drosophila melanogaster]
Length = 2669
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + +H + W F PVDP + PDY+ +I +PMDL ++ +L+ N Y+ EF+ D+
Sbjct: 2568 LIKQMQLHKSAWPFMEPVDPK--EAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDM 2625
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
F N YNP E++ +K A+ L + F K K+ E
Sbjct: 2626 TKIFDNCRYYNPKESSFYKCAEALESYFVQKIKNFRE 2662
>gi|50287799|ref|XP_446329.1| hypothetical protein [Candida glabrata CBS 138]
gi|59799533|sp|Q6FTW5.1|GCN5_CANGA RecName: Full=Histone acetyltransferase GCN5
gi|49525636|emb|CAG59253.1| unnamed protein product [Candida glabrata]
Length = 546
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 99 KRPKMDRGVTHQCSV--ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKT 156
+RPK RG H ++ IL L H A W F RPV+ K ++PDY+ I +PMDL T++
Sbjct: 432 QRPK--RG-PHYAAIQNILVELQNHAAAWPFLRPVN--KEEVPDYYEFIKEPMDLSTMEL 486
Query: 157 RLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
+L+ N Y +EF+ D RL +N LYN + +K A L F+ K K + E
Sbjct: 487 KLENNKYEKMEEFIYDARLVCNNCRLYNGENTSYYKYANRLEKFFNNKVKEIPE 540
>gi|393218547|gb|EJD04035.1| Bromodomain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 795
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 97 KDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKT 156
+D++ + + C +++L F PVDPV L+IP Y SI+ PMD T+
Sbjct: 244 QDRKATLSQAQYRFCVSTVRNLRKLKDATPFLNPVDPVALNIPHYLSIVKHPMDFATIDR 303
Query: 157 RL--------DRN----LYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIK 204
+L D N Y +DEF+ADVRL FSNA +N PE+ V +M + + +FD +
Sbjct: 304 KLVASNPVKPDSNPANPRYLTADEFIADVRLMFSNAYTFNGPEHVVTQMGKRVEAIFDKQ 363
Query: 205 WKSL 208
K L
Sbjct: 364 IKQL 367
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 99 KRPKMDRGVTHQ---CSVILKSLM---MHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLG 152
++ K D G Q C IL L + F PVD VKL IP Y I+ +PMDLG
Sbjct: 444 RKAKTDDGTEEQLRYCGKILTDLHKKSLFTIASPFYEPVDAVKLGIPHYPKIVKRPMDLG 503
Query: 153 TVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSL 208
T++ +LD Y + +F D L N M +NP VH E+ +F+ KW L
Sbjct: 504 TMRKKLDNREYPNAAKFKEDFALMIRNCMAFNPVGTAVHDAGVEIQRVFEEKWSHL 559
>gi|195347028|ref|XP_002040056.1| GM15561 [Drosophila sechellia]
gi|194135405|gb|EDW56921.1| GM15561 [Drosophila sechellia]
Length = 267
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 111 CSVILKSLMMHPA---GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C VI+K L + WVF P+DP L + DY I+ +PMDL TV+ RL+ Y +
Sbjct: 17 CKVIMKRLFSNTYKNIAWVFYEPLDPQLLGLHDYHEIVQEPMDLSTVRHRLNTGCYLNAV 76
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFD 202
+F D+RL F N LY P++ + MA++L +F+
Sbjct: 77 DFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFE 111
>gi|442629132|ref|NP_001261189.1| enhancer of bithorax, isoform I [Drosophila melanogaster]
gi|440215052|gb|AGB93884.1| enhancer of bithorax, isoform I [Drosophila melanogaster]
Length = 2668
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + +H + W F PVDP + PDY+ +I +PMDL ++ +L+ N Y+ EF+ D+
Sbjct: 2567 LIKQMQLHKSAWPFMEPVDPK--EAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDM 2624
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
F N YNP E++ +K A+ L + F K K+ E
Sbjct: 2625 TKIFDNCRYYNPKESSFYKCAEALESYFVQKIKNFRE 2661
>gi|295669172|ref|XP_002795134.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285068|gb|EEH40634.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 910
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPV L+IP Y S+I KPMDL TV+T+L Y + E AD+RL F N +N P
Sbjct: 566 FYHPVDPVALNIPTYHSVIKKPMDLQTVQTKLRTGQYENAKEMEADIRLIFKNCYKFNIP 625
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKW 212
+ + + LFD KW S + +W
Sbjct: 626 GDPTFNAGKSMEELFDNKW-SQKRRW 650
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVD VKL+IP+Y II PMDL T++ +L + Y+ D +AD L N++ +N
Sbjct: 363 FREPVDAVKLNIPNYPLIIKNPMDLRTMEDKLKQGSYASVDAVIADFNLMIENSVTFN-- 420
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
H ++ E NL K E+ S++PKA
Sbjct: 421 -GADHVVSMEGRNL-----KQNFERHLSKLPKA 447
>gi|442629130|ref|NP_001261188.1| enhancer of bithorax, isoform H [Drosophila melanogaster]
gi|440215051|gb|AGB93883.1| enhancer of bithorax, isoform H [Drosophila melanogaster]
Length = 2761
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + +H + W F PVDP + PDY+ +I +PMDL ++ +L+ N Y+ EF+ D+
Sbjct: 2660 LIKQMQLHKSAWPFMEPVDPK--EAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDM 2717
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
F N YNP E++ +K A+ L + F K K+ E
Sbjct: 2718 TKIFDNCRYYNPKESSFYKCAEALESYFVQKIKNFRE 2754
>gi|24654638|ref|NP_728505.1| enhancer of bithorax, isoform B [Drosophila melanogaster]
gi|23092680|gb|AAF47361.2| enhancer of bithorax, isoform B [Drosophila melanogaster]
Length = 2649
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + +H + W F PVDP + PDY+ +I +PMDL ++ +L+ N Y+ EF+ D+
Sbjct: 2548 LIKQMQLHKSAWPFMEPVDPK--EAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDM 2605
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
F N YNP E++ +K A+ L + F K K+ E
Sbjct: 2606 TKIFDNCRYYNPKESSFYKCAEALESYFVQKIKNFRE 2642
>gi|16265798|gb|AAL16644.1|AF417921_1 nucleosome remodeling factor large subunit NURF301 [Drosophila
melanogaster]
Length = 2669
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + +H + W F PVDP + PDY+ +I +PMDL ++ +L+ N Y+ EF+ D+
Sbjct: 2568 LIKQMQLHKSAWPFMEPVDPK--EAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDM 2625
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
F N YNP E++ +K A+ L + F K K+ E
Sbjct: 2626 TKIFDNCRYYNPKESSFYKCAEALESYFVQKIKNFRE 2662
>gi|225682582|gb|EEH20866.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 908
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPV L+IP Y S+I KPMDL TV+T+L Y + E AD+RL F N +N P
Sbjct: 564 FYHPVDPVALNIPTYHSVIKKPMDLQTVQTKLRTGQYENAKEMEADIRLIFKNCYKFNIP 623
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKW 212
+ + + LFD KW S + +W
Sbjct: 624 GDPTFNAGKSMEELFDNKW-SQKRRW 648
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVD VKL+IP+Y II PMDL T++ +L + Y+ D +AD L N++ +N
Sbjct: 361 FREPVDAVKLNIPNYPLIIKNPMDLRTMEDKLKQGSYASVDAVIADFNLMIENSVTFN-- 418
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
H ++ E NL K E+ S++PKA
Sbjct: 419 -GADHVVSMEGRNL-----KQNFERHLSKLPKA 445
>gi|195403457|ref|XP_002060306.1| GJ16047 [Drosophila virilis]
gi|194140645|gb|EDW57119.1| GJ16047 [Drosophila virilis]
Length = 1003
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
++K + H + W F PVDP + PDY+ +I +PMDL ++ +L+ N Y+ EF+ D+
Sbjct: 902 LIKQIQSHKSAWPFMEPVDPE--EAPDYYKVIKEPMDLKQMENKLESNTYTKLAEFIGDM 959
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEE 210
F N YNP E++ +K A+ L + F K KS E
Sbjct: 960 TKIFDNCRYYNPKESSFYKCAEALESFFVQKIKSFRE 996
>gi|350415649|ref|XP_003490706.1| PREDICTED: hypothetical protein LOC100747609 [Bombus impatiens]
Length = 2653
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDP L IPDYF I+ KPMDL T+K +LD YS E+V DV + F NA LYN
Sbjct: 1350 FRQPVDPQALGIPDYFDIVKKPMDLSTIKRKLDTGQYSDPWEYVDDVWMMFDNAWLYNRK 1409
Query: 187 ENNVHKMAQELNNLFD 202
+ V++ +L+ +F+
Sbjct: 1410 TSRVYRYCTKLSEVFE 1425
>gi|198474627|ref|XP_002132733.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
gi|198138474|gb|EDY70135.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
Length = 485
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 111 CSVILKSLM--MHPA-GWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSD 167
C+ IL L H A W F PVD L + DY++II PMDLGTVK +LD +Y +
Sbjct: 119 CNEILMVLFSKKHSAYAWPFYEPVDAQNLGLYDYYNIIKTPMDLGTVKQKLDNRVYKSAS 178
Query: 168 EFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
F AD+RL FSN YNP +++ M ++L F++ +
Sbjct: 179 AFAADMRLIFSNCYKYNPVHHDIVIMCEKLQLAFEMLY 216
>gi|189236626|ref|XP_975654.2| PREDICTED: similar to AGAP000029-PA [Tribolium castaneum]
Length = 2220
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 122 PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAM 181
P F +PVDP L IPDYF I+ +PMDL T+K +LD Y+ E+V DV L F NA
Sbjct: 1093 PESLPFRQPVDPQTLGIPDYFDIVKRPMDLSTIKKKLDIGQYTDPWEYVDDVWLMFDNAW 1152
Query: 182 LYNPPENNVHKMAQELNNLFDIK 204
LYN + V++ +L+ +F+++
Sbjct: 1153 LYNRKTSRVYRYCTKLSEVFEME 1175
>gi|1245146|gb|AAB01099.1| HAT A1 [Tetrahymena thermophila]
Length = 418
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 104 DRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
+R QC+ +++++ H W F PV+ K D+PDY+ +I+ P+D+ ++ +L N Y
Sbjct: 285 ERSFNLQCANVIENMKRHKQSWPFLDPVN--KDDVPDYYDVITDPIDIKAIEKKLQNNQY 342
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
D+F+ DV+ F+NA +YN P+ +K A+EL + + L++ S P
Sbjct: 343 VDKDQFIKDVKRIFTNAKIYNQPDTIYYKAAKELEDFVEPYLTKLKDTKESNTP 396
>gi|328866095|gb|EGG14481.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
Length = 2116
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%)
Query: 103 MDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNL 162
MD+ C+ I + VF+ PVDPV +P Y II PMDLGT+KT+LD
Sbjct: 495 MDKKNLELCNGIYTQIYKRKNAEVFHYPVDPVADGVPTYLDIIKNPMDLGTMKTKLDNGS 554
Query: 163 YSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKW 205
Y EF AD+RL F NA+ +N + K+A+ L F+ K+
Sbjct: 555 YKTIKEFAADMRLMFINALTFNLDGTPIWKLAKSLLQNFNTKF 597
>gi|270006069|gb|EFA02517.1| hypothetical protein TcasGA2_TC008222 [Tribolium castaneum]
Length = 2308
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 122 PAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAM 181
P F +PVDP L IPDYF I+ +PMDL T+K +LD Y+ E+V DV L F NA
Sbjct: 1055 PESLPFRQPVDPQTLGIPDYFDIVKRPMDLSTIKKKLDIGQYTDPWEYVDDVWLMFDNAW 1114
Query: 182 LYNPPENNVHKMAQELNNLFDIK 204
LYN + V++ +L+ +F+++
Sbjct: 1115 LYNRKTSRVYRYCTKLSEVFEME 1137
>gi|118381444|ref|XP_001023869.1| histone acetyltransferase gcn5 [Tetrahymena thermophila]
gi|89305650|gb|EAS03638.1| histone acetyltransferase gcn5 [Tetrahymena thermophila SB210]
Length = 418
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 104 DRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLY 163
+R QC+ +++++ H W F PV+ K D+PDY+ +I+ P+D+ ++ +L N Y
Sbjct: 285 ERSFNLQCANVIENMKRHKQSWPFLDPVN--KDDVPDYYDVITDPIDIKAIEKKLQNNQY 342
Query: 164 SVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEKWSSEVP 217
D+F+ DV+ F+NA +YN P+ +K A+EL + + L++ S P
Sbjct: 343 VDKDQFIKDVKRIFTNAKIYNQPDTIYYKAAKELEDFVEPYLTKLKDTKESNTP 396
>gi|410901855|ref|XP_003964410.1| PREDICTED: nucleosome-remodeling factor subunit BPTF-like [Takifugu
rubripes]
Length = 2545
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
IL+SL H W F PVDP D PDY+ +I +PMD T++TRL + Y EFVADV
Sbjct: 2437 ILRSLQSHKMAWPFLEPVDP--HDAPDYYRVIKEPMDFSTMETRLQKRHYHKLTEFVADV 2494
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
F N YNP + + A+ L F K K +
Sbjct: 2495 TKIFDNCRYYNPNDTPFFQCAELLEAFFVQKLKGFK 2530
>gi|383851880|ref|XP_003701459.1| PREDICTED: uncharacterized protein LOC100880707 [Megachile rotundata]
Length = 2636
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F +PVDP L IPDYF I+ KPMDL T+K +LD YS E+V DV + F NA LYN
Sbjct: 1332 FRQPVDPQALGIPDYFDIVKKPMDLSTIKRKLDTGQYSDPWEYVDDVWMMFDNAWLYNRK 1391
Query: 187 ENNVHKMAQELNNLFD 202
+ V++ +L+ +F+
Sbjct: 1392 TSRVYRYCTKLSEVFE 1407
>gi|226289996|gb|EEH45480.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 908
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDPV L+IP Y S+I KPMDL TV+T+L Y + E AD+RL F N +N P
Sbjct: 564 FYHPVDPVALNIPTYHSVIKKPMDLQTVQTKLRTGQYENAKEMEADIRLMFKNCYKFNIP 623
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKW 212
+ + + LFD KW S + +W
Sbjct: 624 GDPTFNAGKSMEELFDNKW-SQKRRW 648
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVD VKL+IP+Y II PMDL T++ +L + Y+ D +AD L N++ +N
Sbjct: 361 FREPVDAVKLNIPNYPLIIKNPMDLRTMEDKLKQGSYASVDAVIADFNLMIENSVTFN-- 418
Query: 187 ENNVHKMAQELNNLFDIKWKSLEEKWSSEVPKA 219
H ++ E NL K E+ S++PKA
Sbjct: 419 -GADHVVSMEGRNL-----KQNFERHLSKLPKA 445
>gi|326490245|dbj|BAJ84786.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 352
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
Query: 95 GPKDKRPKMDRGVTHQCSVILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTV 154
G +D K + Q + I++ + H F +PVD V L + DY+ II+KPMD T+
Sbjct: 74 GARDSNCKGMPDLMRQLAGIIRQITSHEWSAPFLQPVDVVGLQLDDYYKIITKPMDFSTI 133
Query: 155 KTRL---DRNLYSVSDEFVADVRLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLEEK 211
+ ++ D Y E +DVRL F+NAM YN ++VH MA+ L F+ KW L K
Sbjct: 134 QNKMEGKDGTKYKSVREIYSDVRLIFTNAMTYNDELHDVHIMAKLLLEKFEEKWLQLLPK 193
Query: 212 WSSEVPKAGLGKILSGKMMEVND 234
+E K + ME ND
Sbjct: 194 VENEERK---------QQMETND 207
>gi|195350536|ref|XP_002041796.1| GM11349 [Drosophila sechellia]
gi|194123601|gb|EDW45644.1| GM11349 [Drosophila sechellia]
Length = 2950
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 127 FNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADVRLTFSNAMLYNPP 186
F PVDP L IPDYF I+ KPMDLGT++T + YS E+V DV L F NA LYN
Sbjct: 1486 FRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNRK 1545
Query: 187 ENNVHKMAQELNNLFD 202
+ V++ +L+ +F+
Sbjct: 1546 TSRVYRYCTKLSEVFE 1561
>gi|327279504|ref|XP_003224496.1| PREDICTED: nucleosome-remodeling factor subunit BPTF-like [Anolis
carolinensis]
Length = 2550
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 114 ILKSLMMHPAGWVFNRPVDPVKLDIPDYFSIISKPMDLGTVKTRLDRNLYSVSDEFVADV 173
+L+SL H W F PVDP D PDY+++I +PMDL T++ R+ + Y EFVAD+
Sbjct: 2443 VLRSLQAHKMAWPFLEPVDPN--DAPDYYAVIKEPMDLSTMEERILKRYYKKVTEFVADM 2500
Query: 174 RLTFSNAMLYNPPENNVHKMAQELNNLFDIKWKSLE 209
F N YNP ++ ++ A+ L + F K K +
Sbjct: 2501 TKIFDNCRYYNPNDSPFYQCAEVLESFFVQKLKGFK 2536
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.127 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,941,767,764
Number of Sequences: 23463169
Number of extensions: 362272382
Number of successful extensions: 1771997
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6633
Number of HSP's successfully gapped in prelim test: 6731
Number of HSP's that attempted gapping in prelim test: 1647989
Number of HSP's gapped (non-prelim): 95640
length of query: 597
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 449
effective length of database: 8,886,646,355
effective search space: 3990104213395
effective search space used: 3990104213395
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)