Query 007589
Match_columns 597
No_of_seqs 295 out of 1674
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 05:33:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007589.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007589hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkt_A Multi antimicrobial ext 100.0 1.7E-44 5.9E-49 388.6 37.4 417 139-578 9-444 (460)
2 3mkt_A Multi antimicrobial ext 99.8 3.9E-17 1.3E-21 175.0 21.4 209 137-367 233-447 (460)
3 1pw4_A Glycerol-3-phosphate tr 90.0 18 0.00061 36.7 29.0 24 551-574 408-431 (451)
4 2k1k_A Ephrin type-A receptor 35.9 43 0.0015 21.4 3.5 24 341-364 13-36 (38)
5 3o7q_A L-fucose-proton symport 28.1 4.3E+02 0.015 25.8 27.8 32 142-173 26-57 (438)
6 4aps_A DI-OR tripeptide H+ sym 27.7 4.7E+02 0.016 26.1 27.6 11 441-451 340-350 (491)
7 2ks1_B Epidermal growth factor 20.0 1.9E+02 0.0064 19.1 4.5 26 342-367 14-39 (44)
8 2l2t_A Receptor tyrosine-prote 17.6 2.3E+02 0.0078 18.7 4.5 11 357-367 28-38 (44)
9 2jwa_A Receptor tyrosine-prote 15.8 2.3E+02 0.008 18.6 4.2 12 356-367 28-39 (44)
10 4hkr_A Calcium release-activat 11.1 8.3E+02 0.028 21.9 13.2 80 411-491 56-143 (214)
No 1
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=100.00 E-value=1.7e-44 Score=388.63 Aligned_cols=417 Identities=19% Similarity=0.226 Sum_probs=380.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhhhhhhhHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhhhhhh
Q 007589 139 DAKNELIVLTLPAIAGQVIDPLAQLMETAYVGRLGSVELASAGVSISIFNIVSKLFNIPLLSVATSFVAEDIAKNLTKDL 218 (597)
Q Consensus 139 ~~~~~l~~~a~p~~~~~~~~~l~~~vd~~~ig~lG~~~laa~~~a~~i~~~~~~~~~~gl~~~~~~~va~~~~~~~~~~~ 218 (597)
+..|++++.++|.++++++..+++++|+.+++|+|++++|+++++.++...... +..|+..+..+.+++++|+++
T Consensus 9 ~~~k~~~~~~~p~~~~~~~~~~~~~v~~~~~~~lg~~~~~~~~~~~~i~~~~~~-~~~g~~~~~~~~is~~~g~~~---- 83 (460)
T 3mkt_A 9 KEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSIL-FGVGLLMALVPVVAQLNGAGR---- 83 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTSSHHHHHHHHHHHHHH-HHHHHHHHHGGGCTTTTSSSS----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCC----
Confidence 458999999999999999999999999999999999999999999999776654 456888899999999888776
Q ss_pred hcccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHhhcCCCCcccchHHHHHHHHHHHhhhHHHHH
Q 007589 219 AAGLEGNGKPPNGTTERKQLSSVSTALLLAVGIGIFEAAALSLASGPFLNLMGVPSASAMHGPAKKFLMLRALGSPAFVV 298 (597)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~i~~~l~~~~~~~~~~~a~~~l~~~~~~~~~~~~ 298 (597)
+++.++.+++++.+.++++++.+++ +++++++..+++.+++ ..+.+..|++++.++.++..+
T Consensus 84 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~--~~~~~~~~l~i~~~~~~~~~~ 145 (460)
T 3mkt_A 84 ---------------QHKIPFEVHQGLILALLVSVPIIAV-LFQTQFIIRFMDVEEA--MATKTVGYMHAVIFAVPAYLL 145 (460)
T ss_dssp ---------------TTTHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTCSSCSSTTH--HHHHHHHHHTTGGGHHHHHHH
T ss_pred ---------------hhHHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 6788889999999999999987765 7788999998877655 788999999999999999999
Q ss_pred HHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHhh-c---CCChhhHHHHHHHHHHHHHHHHHHHHhhccccCC---
Q 007589 299 SLALQGIFRGFKDTKTPVLCLGIGNLLAVFLFPILIYF-C---QLGMPGAAISTVVSQYIVAVTMIWFLNKKVVLMP--- 371 (597)
Q Consensus 299 ~~~~~~~l~~~~~~~~~~~~~~~~~v~~i~l~~lli~~-~---~~Gv~Gaa~at~is~~~~~~~~~~~l~~~~~~~~--- 371 (597)
...+++++|+.+|++.+++.+++++++|+++++++++. + ++|+.|+++|+++++++..++.+++++++++..+
T Consensus 146 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~l~~~li~~~~~~p~~g~~g~a~a~~i~~~~~~~~~~~~~~~~~~~~~~~~ 225 (460)
T 3mkt_A 146 FQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKV 225 (460)
T ss_dssp HHHHTTTTCTTSCCTTTHHHHHHHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCC
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHhCcchhhhhh
Confidence 99999999999999999999999999999999999976 3 7999999999999999999999888876543221
Q ss_pred ----CCcchhhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007589 372 ----PKMGALQFGDYVKSGGFLLGRTLAVLITMTLGTSMAARQGSDAMAAHQICMQVWLAVSLLTDALAASGQALIASYV 447 (597)
Q Consensus 372 ----~~~~~~~~~~~lk~~~p~~~~~l~~~i~~~i~~~l~~~~g~~~laa~~i~~~i~~l~~~~~~~l~~a~~p~vs~~~ 447 (597)
.+.++..+|++++++.|.+++.+...+.+.+++.+++++|++++|+|+++.++.++..++..+++++..|.+++++
T Consensus 226 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~~~~~~~~~~~~a~~p~i~~~~ 305 (460)
T 3mkt_A 226 FETFHKPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKL 305 (460)
T ss_dssp SCCCCSSTTSSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccccCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2445678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCc
Q 007589 448 SKGDFKTVREITNFVLKIGVLTGVSLATILGLSFGSLAPLFTKDPKVLGIVGTGVLFVSASQPINALAFIFDGLHYGVSD 527 (597)
Q Consensus 448 g~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~l~~lf~~d~~v~~~~~~~l~i~~~~~~~~~~~~i~~~~l~~~g~ 527 (597)
|++|++++++..++++++.+.+++++++++.++++++..+|++|+++.+.+..++++++++.++++++.+..+++++.||
T Consensus 306 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~ 385 (460)
T 3mkt_A 306 GEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKD 385 (460)
T ss_dssp HSSCCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGST
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHH-HHHHHHHHHhcCC-------CChhHHHHHHHHHHHHHHHHHHHHHH
Q 007589 528 FRYAACSMMLVG-AMSSTFLLYAPRA-------TGLPGVWAGLTLFMGLRTVAGFVRLL 578 (597)
Q Consensus 528 ~~~~~~~~~~~~-l~~~~~~~~l~~~-------~Gi~Gv~~a~~i~~~i~~~~~~~~l~ 578 (597)
++.+++.+++.. ++++++.+++.+. +|+.|+|+++.+++++..++..++++
T Consensus 386 ~~~~~~~~~~~~~~~~i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~ 444 (460)
T 3mkt_A 386 MTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLY 444 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988876 7777777766655 99999999999999998887766653
No 2
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.75 E-value=3.9e-17 Score=174.98 Aligned_cols=209 Identities=17% Similarity=0.126 Sum_probs=190.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhhhhhhhHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhhhh
Q 007589 137 TQDAKNELIVLTLPAIAGQVIDPLAQLMETAYVGRLGSVELASAGVSISIFNIVSKLFNIPLLSVATSFVAEDIAKNLTK 216 (597)
Q Consensus 137 ~~~~~~~l~~~a~p~~~~~~~~~l~~~vd~~~ig~lG~~~laa~~~a~~i~~~~~~~~~~gl~~~~~~~va~~~~~~~~~ 216 (597)
+.+..|++++.++|.++.++...+...+|+.+++++|++++|+++++..+.++... +..++..+..+.+++.+|+++
T Consensus 233 ~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~~~~~-~~~~~~~a~~p~i~~~~g~~~-- 309 (460)
T 3mkt_A 233 QPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFM-FPMSIGAAVSIRVGHKLGEQD-- 309 (460)
T ss_dssp TTSSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHSSC--
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCC--
Confidence 34567899999999999999999999999999999999999999999999998884 555899999999999999887
Q ss_pred hhhcccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHhhcCCCCcccchHHHHHHHHHHHhhhHHH
Q 007589 217 DLAAGLEGNGKPPNGTTERKQLSSVSTALLLAVGIGIFEAAALSLASGPFLNLMGVPSASAMHGPAKKFLMLRALGSPAF 296 (597)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~i~~~l~~~~~~~~~~~a~~~l~~~~~~~~~~ 296 (597)
+++.++..+.++.+..+++++.+++++++++++..++..+++ ..+.+..++++..++.++.
T Consensus 310 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~~~~~~l~~~~~~~~~~ 370 (460)
T 3mkt_A 310 -----------------TKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQV--VVALAMQLLLFAAIYQCMD 370 (460)
T ss_dssp -----------------CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCST--THHHHHHHHHHHHHHHHHH
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--HHHHHHHHHHHHHHHHHHH
Confidence 677888999999999999999999999999999998876544 7889999999999999999
Q ss_pred HHHHHHHHHHhhcCCChhHHHHHHHHH-HHHHHHHHHHHhh----cC-CChhhHHHHHHHHHHHHHHHHHHHHhhcc
Q 007589 297 VVSLALQGIFRGFKDTKTPVLCLGIGN-LLAVFLFPILIYF----CQ-LGMPGAAISTVVSQYIVAVTMIWFLNKKV 367 (597)
Q Consensus 297 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-v~~i~l~~lli~~----~~-~Gv~Gaa~at~is~~~~~~~~~~~l~~~~ 367 (597)
.+.....+++++.||++.+++..+++. +++++++++++.. ++ +|+.|+++|+.+++.+..++..+.++|+.
T Consensus 371 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~~~ 447 (460)
T 3mkt_A 371 AVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQ 447 (460)
T ss_dssp HHHHHHHHHHGGGSTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSSSC
T ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988 9999999999976 66 99999999999999999988877766544
No 3
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=89.96 E-value=18 Score=36.65 Aligned_cols=24 Identities=13% Similarity=-0.110 Sum_probs=13.0
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHH
Q 007589 551 RATGLPGVWAGLTLFMGLRTVAGF 574 (597)
Q Consensus 551 ~~~Gi~Gv~~a~~i~~~i~~~~~~ 574 (597)
..+|....++...+..++..++.+
T Consensus 408 ~~~g~~~~~~~~~~~~~~~~~~~~ 431 (451)
T 1pw4_A 408 DFFGWDGGFMVMIGGSILAVILLI 431 (451)
T ss_dssp HSSCSHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHHHHHHHHHHH
Confidence 456766666655555554444433
No 4
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=35.92 E-value=43 Score=21.36 Aligned_cols=24 Identities=0% Similarity=0.088 Sum_probs=13.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHh
Q 007589 341 MPGAAISTVVSQYIVAVTMIWFLN 364 (597)
Q Consensus 341 v~Gaa~at~is~~~~~~~~~~~l~ 364 (597)
+.|+.++.+++-.+...+.+++.+
T Consensus 13 IAGiVvG~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 13 IVAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eeeeehHHHHHHHHHHHHHHHHee
Confidence 456666666665555555544443
No 5
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=28.12 E-value=4.3e+02 Score=25.80 Aligned_cols=32 Identities=9% Similarity=0.067 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 007589 142 NELIVLTLPAIAGQVIDPLAQLMETAYVGRLG 173 (597)
Q Consensus 142 ~~l~~~a~p~~~~~~~~~l~~~vd~~~ig~lG 173 (597)
+.+.....-..+..+.....+.+-..+..++|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 57 (438)
T 3o7q_A 26 IPFALLCSLFFLWAVANNLNDILLPQFQQAFT 57 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Confidence 33444444344444443444444334444454
No 6
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=27.67 E-value=4.7e+02 Score=26.12 Aligned_cols=11 Identities=18% Similarity=0.069 Sum_probs=5.1
Q ss_pred HHHHHHhcCCC
Q 007589 441 ALIASYVSKGD 451 (597)
Q Consensus 441 p~vs~~~g~~~ 451 (597)
..+.+.+++++
T Consensus 340 ~~l~~r~~~r~ 350 (491)
T 4aps_A 340 AWLWTAWKKNQ 350 (491)
T ss_dssp HHHHHHTTTC-
T ss_pred HHHHHHHhccC
Confidence 34455565543
No 7
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=19.95 E-value=1.9e+02 Score=19.05 Aligned_cols=26 Identities=12% Similarity=0.301 Sum_probs=11.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcc
Q 007589 342 PGAAISTVVSQYIVAVTMIWFLNKKV 367 (597)
Q Consensus 342 ~Gaa~at~is~~~~~~~~~~~l~~~~ 367 (597)
.+..++-++...+..+..++++++++
T Consensus 14 A~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 14 ATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 33333333333444444455555543
No 8
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=17.56 E-value=2.3e+02 Score=18.66 Aligned_cols=11 Identities=18% Similarity=0.443 Sum_probs=4.7
Q ss_pred HHHHHHHhhcc
Q 007589 357 VTMIWFLNKKV 367 (597)
Q Consensus 357 ~~~~~~l~~~~ 367 (597)
+..++++|+++
T Consensus 28 ~~~~~~~RRRr 38 (44)
T 2l2t_A 28 LTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHhhhhh
Confidence 33344454443
No 9
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=15.81 E-value=2.3e+02 Score=18.61 Aligned_cols=12 Identities=8% Similarity=0.243 Sum_probs=5.7
Q ss_pred HHHHHHHHhhcc
Q 007589 356 AVTMIWFLNKKV 367 (597)
Q Consensus 356 ~~~~~~~l~~~~ 367 (597)
.+....++||++
T Consensus 28 ~l~~~~~~RRR~ 39 (44)
T 2jwa_A 28 GVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHhheehhh
Confidence 333445555544
No 10
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=11.13 E-value=8.3e+02 Score=21.86 Aligned_cols=80 Identities=13% Similarity=0.128 Sum_probs=40.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007589 411 GSDAMAAHQICMQVWLAVSLLTDALAASGQALIASYVS--------KGDFKTVREITNFVLKIGVLTGVSLATILGLSFG 482 (597)
Q Consensus 411 g~~~laa~~i~~~i~~l~~~~~~~l~~a~~p~vs~~~g--------~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~ 482 (597)
.+.-+.+|+++..+.-...+++.-+++-+.|.+-..-+ +.-.++.+.++-..-.++..+++++.++-....-
T Consensus 56 p~~LLi~fav~Ttllv~vml~AlMIsTcILPnIeav~~~h~~~~v~esPH~r~~~yIE~AW~fST~lGi~LFL~evall~ 135 (214)
T 4hkr_A 56 PPGMLIAFAICTTLLVAVHMLALMISTCILPNIETVSNLHSISLVHESPHERLHWYIETAWAFSTLLGLILFLLEIAILC 135 (214)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHTTTC----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhcccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45668899999999888888888888887776654321 1223455555544444444444433333333322
Q ss_pred hhhcccCCC
Q 007589 483 SLAPLFTKD 491 (597)
Q Consensus 483 ~l~~lf~~d 491 (597)
| ++++..+
T Consensus 136 W-VKF~~~~ 143 (214)
T 4hkr_A 136 W-VKFYDLS 143 (214)
T ss_dssp H-HHHTTTC
T ss_pred e-EEeecCC
Confidence 2 4445443
Done!