BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007591
(597 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SD67|FTSH7_ARATH ATP-dependent zinc metalloprotease FTSH 7, chloroplastic
OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1
Length = 802
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/610 (70%), Positives = 491/610 (80%), Gaps = 36/610 (5%)
Query: 2 SSIEFLRSTIH--------NRFLYANSSYNLHGGSFCHSRCRVYYHNTYRFASHAILFP- 52
++ EFL+ IH N LY+ +S F + RCRVY N RF S++I P
Sbjct: 3 TTFEFLQPRIHGFATCCSSNSLLYSKAS------RFFNDRCRVYRQNPNRFVSNSITLPL 56
Query: 53 ---SVIISNSQQKLSLKRGLLYSNQNLREIKILASSKDGESSETSESDGQSQSQTQSPTS 109
V + + ++ +L G L ++ +D ++ +SE + SQS
Sbjct: 57 QKKQVTVLRNHERFNLWDGFSRKKSRL----VVNCQEDDQNESSSEEEESSQS------- 105
Query: 110 TDSPTSQRREKRNKSNGFWWSKGKKFKWQPIIQAQEIGVLLLQLGIVMFVMRLLRPGIPL 169
+P R++ K + WWSKGKK++WQPIIQAQ IGVLLLQL +VMFVMRLLRPGIPL
Sbjct: 106 --TPAKSERKREKKEDKVWWSKGKKWQWQPIIQAQGIGVLLLQLSVVMFVMRLLRPGIPL 163
Query: 170 PGSEPRTSTTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKF-Q 228
PGSEPR TTFVSVPYS+FLSK+NSNQV KVEVDGV ++FKL++DG QESE T++ Q
Sbjct: 164 PGSEPRIQTTFVSVPYSEFLSKVNSNQVQKVEVDGVQVLFKLRDDGKWQESE--TSRLSQ 221
Query: 229 ESESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYV 288
SESLL++V PTKR+VY+TTRP DIKTPYEKML N VEFGSP+KRSGGF NSALIALFY+
Sbjct: 222 SSESLLRTVAPTKRVVYSTTRPGDIKTPYEKMLGNNVEFGSPEKRSGGFFNSALIALFYI 281
Query: 289 AVLAGLLHRFPVSFSQTA-GQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEI 347
AVLAGL+ RFPVSFS ++ GQ+ RK GP G KVS G+TITFADVAGVDEAKEELEEI
Sbjct: 282 AVLAGLI-RFPVSFSTSSTGQLRTRKAGGPDGGKVSGGGETITFADVAGVDEAKEELEEI 340
Query: 348 VEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVG 407
VEFLR+P+KY+RLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVG
Sbjct: 341 VEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVG 400
Query: 408 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFD 467
MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG+FR+ SNDEREQTLNQLLTEMDGFD
Sbjct: 401 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDGFD 460
Query: 468 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDI 527
SNSAVIVLGATNR+DVLDPALRRPGRFDRVV VETPDKIGRE+IL+VHVSKKELPL D+
Sbjct: 461 SNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSKKELPLGDDV 520
Query: 528 DLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLK 587
+LG IASMTTGFTGADLANLVNEAALLAGR NK VEKIDFI AVERSIAGIEKK+A+LK
Sbjct: 521 NLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDFIQAVERSIAGIEKKSARLK 580
Query: 588 GSEKAVVARQ 597
G+EKAVVAR
Sbjct: 581 GNEKAVVARH 590
>sp|Q9FIM2|FTSH9_ARATH ATP-dependent zinc metalloprotease FTSH 9, chloroplastic
OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1
Length = 806
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/608 (70%), Positives = 499/608 (82%), Gaps = 25/608 (4%)
Query: 1 MSSIEFLRSTIHNRFLYA-----NSSYNLHGGSFCHSRCRVYYHNTYRFASHA-ILFP-S 53
M+SIE L IH++F ++ +S LH SF R + N RF S++ I P S
Sbjct: 1 MTSIELLSPLIHDKFRFSTCCSTSSLLYLHASSFFRDRSFGFRQNPNRFVSNSSIQLPQS 60
Query: 54 VIISNSQQKLSLKRGLLYSNQNLREIKILASSKDGESSETSESDGQSQSQTQSPTSTDSP 113
V S +Q++ +L +G I+ + + + +SE +G+
Sbjct: 61 VPGSINQERFNLWQGFSRKKSTSSSRTIVNCQEGDQKASSSEGEGK-------------- 106
Query: 114 TSQRREKRNKSNGFWWSKGKKFKWQPIIQAQEIGVLLLQLGIVMFVMRLLRPGIPLPGSE 173
T++ + ++ N WWSKGKK++W+PIIQAQEIGV+LLQLGIVMFV+RLLRPGIPLPGSE
Sbjct: 107 TNKDKGRKQGKNELWWSKGKKWQWKPIIQAQEIGVMLLQLGIVMFVVRLLRPGIPLPGSE 166
Query: 174 PRTSTTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQES--- 230
PRT TTF+SVPYSDFLSK+N+++V KVEVDG H++FKLK+DG++QESE ++ + S
Sbjct: 167 PRTQTTFMSVPYSDFLSKVNNDEVQKVEVDGFHVLFKLKDDGNLQESETSSSSIKLSESS 226
Query: 231 ESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAV 290
E++L+SV PTKR+VY+TTRP DIKTPYEKMLEN VEFGSPDKRSGGF NS LI LFY+AV
Sbjct: 227 ETMLRSVAPTKRVVYSTTRPRDIKTPYEKMLENNVEFGSPDKRSGGFFNSGLIVLFYIAV 286
Query: 291 LAGLLHRFPVSFSQ-TAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVE 349
LAGLLHRFPV+FSQ T GQ+ RK+ GPGG KVS G+TITFADVAGVDEAKEELEEIVE
Sbjct: 287 LAGLLHRFPVNFSQSTTGQLRTRKSGGPGGGKVSGDGETITFADVAGVDEAKEELEEIVE 346
Query: 350 FLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMG 409
FL++PD+Y+RLGARPPRGVLLVGLPGTGKTLLAKAVAGE++VPFISCSASEFVELYVGMG
Sbjct: 347 FLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVELYVGMG 406
Query: 410 ASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSN 469
ASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG+FR+VSNDEREQTLNQLLTEMDGFDS+
Sbjct: 407 ASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDGFDSS 466
Query: 470 SAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDL 529
SAVIVLGATNR+DVLDPALRRPGRFDRVV VE+PDK+GRE+ILKVHVSKKELPL D++L
Sbjct: 467 SAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKELPLGDDVNL 526
Query: 530 GDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGS 589
IASMTTGFTGADLANLVNEAALLAGR +K+ V+KIDFIHAVERSIAGIEKKTA+LKGS
Sbjct: 527 ASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDFIHAVERSIAGIEKKTARLKGS 586
Query: 590 EKAVVARQ 597
EKAVVAR
Sbjct: 587 EKAVVARH 594
>sp|Q6H6R9|FTSH7_ORYSJ ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH7 PE=3 SV=1
Length = 822
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/487 (74%), Positives = 417/487 (85%), Gaps = 4/487 (0%)
Query: 113 PTSQRREKRNKSNGFWWSKGKKFKWQPIIQAQEIGVLLLQLGIVMFVMRLLRPGIPLPGS 172
P+S+R E + + ++ W+PI+Q +E+G LLLQLG +F +R+LRP I LPGS
Sbjct: 127 PSSKRGENKWRRKLIKGGGVGRWLWEPIVQGREMGFLLLQLGFAIFALRMLRPEIALPGS 186
Query: 173 EPRTSTTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQE-SE 231
EPR TT+VSVPYSDFL+ I+ NQV KVEVDGVHIMF+L+ + ++ + + Q ++
Sbjct: 187 EPRPQTTYVSVPYSDFLASIDKNQVKKVEVDGVHIMFRLRPE--VEARAMEQPQVQRGTD 244
Query: 232 SLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVL 291
S+ + +RIV+TTTRP DIKTPYEKM+EN VEFGSPDKRSGG LNSAL+AL YV ++
Sbjct: 245 SVADNAGVPRRIVFTTTRPVDIKTPYEKMVENSVEFGSPDKRSGGLLNSALVALIYVVLI 304
Query: 292 AGLLHRFPVSFSQ-TAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEF 350
A +L R P+SFSQ +AGQ+ +RK GGAKVSE D +TFADVAGVDEAKEELEEIVEF
Sbjct: 305 AVVLQRLPISFSQHSAGQLRNRKNSNSGGAKVSESTDIVTFADVAGVDEAKEELEEIVEF 364
Query: 351 LRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGA 410
LR+P++YIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGA
Sbjct: 365 LRNPERYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGA 424
Query: 411 SRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNS 470
+RVRDLFARAKKE+PSIIFIDEIDAVAKSRDGR+RIVSNDEREQTLNQLLTEMDGFD+NS
Sbjct: 425 ARVRDLFARAKKESPSIIFIDEIDAVAKSRDGRYRIVSNDEREQTLNQLLTEMDGFDTNS 484
Query: 471 AVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLG 530
AVIVLGATNR+DVLDPALRRPGRFDRVVMVE PD+ GRE+ILKVHVS+KELPL KD+DL
Sbjct: 485 AVIVLGATNRADVLDPALRRPGRFDRVVMVEAPDRFGRESILKVHVSRKELPLGKDVDLS 544
Query: 531 DIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSE 590
DIA+MTTGFTGADLANLVNEAALLAGR NK +VEKIDFI AVERSIAGIEKK AKLKG+E
Sbjct: 545 DIAAMTTGFTGADLANLVNEAALLAGRSNKEIVEKIDFICAVERSIAGIEKKHAKLKGNE 604
Query: 591 KAVVARQ 597
KAVVAR
Sbjct: 605 KAVVARH 611
>sp|P85190|FTSH_HELAN ATP-dependent zinc metalloprotease FTSH, chloroplastic (Fragment)
OS=Helianthus annuus GN=FTSH PE=1 SV=1
Length = 260
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/213 (93%), Positives = 206/213 (96%)
Query: 385 VAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRF 444
VAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRF
Sbjct: 7 VAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRF 66
Query: 445 RIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPD 504
RIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNR+DVLDPALRRPGRFDRVVMVETPD
Sbjct: 67 RIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVMVETPD 126
Query: 505 KIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVE 564
++GR+AIL VHVSKKELPL D+DL IASMTTGFTGADLANLVNEAALLAGR NKVVVE
Sbjct: 127 RVGRQAILNVHVSKKELPLGDDVDLASIASMTTGFTGADLANLVNEAALLAGRQNKVVVE 186
Query: 565 KIDFIHAVERSIAGIEKKTAKLKGSEKAVVARQ 597
KIDFIHAVERSIAGIEKKTAKL+GSEKAVVAR
Sbjct: 187 KIDFIHAVERSIAGIEKKTAKLQGSEKAVVARH 219
>sp|A8ZNZ4|FTSH_ACAM1 ATP-dependent zinc metalloprotease FtsH OS=Acaryochloris marina
(strain MBIC 11017) GN=ftsH PE=3 SV=1
Length = 655
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/423 (49%), Positives = 277/423 (65%), Gaps = 34/423 (8%)
Query: 180 FVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTP 239
F YSDF++++ + QV +VEV I + LK+D + N+ E+ ++ +V
Sbjct: 43 FPITAYSDFITQVEAGQVERVEVRPDRIRYILKSD------QYGFNEGTETAAVFDTV-- 94
Query: 240 TKRIVYTTTRPSDIKTPYEKML-ENQVEFGSPDKRSGGFLNSAL----IALFYVAVLAGL 294
P I K L E+ V++ +P S +L + L L + + + L
Sbjct: 95 ----------PVGIDLELPKFLREHDVQYFAPPPSSLSWLPTLLGWVVPPLIFFGIWSWL 144
Query: 295 LHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDT-ITFADVAGVDEAKEELEEIVEFLRS 353
++R +Q AG T G A++ +G T +TF DVAGV+EAK EL EIV+FL
Sbjct: 145 INR-----NQGAGPAA--LTVGQSKARIYSEGSTGVTFDDVAGVEEAKTELLEIVDFLAH 197
Query: 354 PDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRV 413
DKY RLGA+ P+GVLLVG PGTGKTLLAKA+AGEA+VPF S S SEF+EL+VG+GA+RV
Sbjct: 198 ADKYTRLGAKIPKGVLLVGPPGTGKTLLAKAIAGEAKVPFFSISGSEFIELFVGIGAARV 257
Query: 414 RDLFARAKKEAPSIIFIDEIDAVAKSR-DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAV 472
RDLF +AK++AP I+FIDE+DA+ K+R NDEREQTLNQLL+EMDGFD N V
Sbjct: 258 RDLFEQAKQQAPCIVFIDELDALGKARGGPGGFTGGNDEREQTLNQLLSEMDGFDPNVGV 317
Query: 473 IVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDI 532
I+L ATNR +VLDPAL RPGRFDR ++V+ PDK+GREAILKVHV + + LA+DI+L +
Sbjct: 318 ILLAATNRPEVLDPALLRPGRFDRQIVVDRPDKMGREAILKVHV--RGVKLAEDINLTKL 375
Query: 533 ASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKA 592
A T GF+GADLANLVNEAALLA R ++ V DF A+ER +AG+EKK+ L EK
Sbjct: 376 AVRTPGFSGADLANLVNEAALLAARQSRDAVVMSDFNEAIERVVAGLEKKSRVLNDLEKK 435
Query: 593 VVA 595
VA
Sbjct: 436 TVA 438
>sp|Q2LUQ1|FTSH_SYNAS ATP-dependent zinc metalloprotease FtsH OS=Syntrophus
aciditrophicus (strain SB) GN=ftsH PE=3 SV=1
Length = 736
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 223/508 (43%), Positives = 298/508 (58%), Gaps = 40/508 (7%)
Query: 88 GESSETSESDGQSQSQTQSPTSTDSPTSQRREKRNKSNGFWWS-------KGKKFKWQPI 140
G+ E+ SDGQ + + S ++ R++ GF + +G K P
Sbjct: 26 GKDMESGTSDGQQRKMMEFEISEEADMRLTRQQTQNRTGFASADTKQGSPEGADRKKMPP 85
Query: 141 IQAQEIGVLLLQLGIVMFVM-RLLRPGIPLPGSEPRTSTTFVSVPYSDFLSKINSNQVAK 199
+A VL+L IV F+M RLL P P V VPY+ F ++ V +
Sbjct: 86 GKAWLWFVLIL---IVNFLMVRLLIPDAEQP----------VMVPYTLFKGEVGKGNVKE 132
Query: 200 VEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYEK 259
+ G I + K + + Q +E K +S K+VT +TTT PS + E
Sbjct: 133 IFSRGDTITGRFKEEIAYQAAE---EKAGDSRKASKAVT-----TFTTTVPSFVDPGLEA 184
Query: 260 ML-ENQVEFGSP---DKRS--GGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRK 313
L N VE + ++RS + S L ++A L R G +G K
Sbjct: 185 FLISNGVEISAKPIHEERSPWATIVYSFGPGLLFIAFYIWLFRRMAQQGGLGGGIMGIGK 244
Query: 314 TRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGL 373
++ E+G +TF DVAG+DEA+ EL EIV+FL+ P KY RLG P+GVLLVG
Sbjct: 245 SKA--RRYDQEEGRKVTFDDVAGIDEAENELVEIVDFLKDPPKYTRLGGTAPKGVLLVGA 302
Query: 374 PGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEI 433
PGTGKTLLAKAVAGEA VPF S SA+EFVE+ VG+GA+RVRDLF +A++ AP+IIFIDE+
Sbjct: 303 PGTGKTLLAKAVAGEAGVPFFSMSAAEFVEMIVGVGAARVRDLFKQAREHAPAIIFIDEL 362
Query: 434 DAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGR 493
DA+ ++R G+ I E+EQTLNQ+LTEMDGF S +IVL ATN+ DVLD AL RPGR
Sbjct: 363 DAIGRAR-GQVAIGGASEQEQTLNQILTEMDGFSSREGIIVLAATNQPDVLDKALLRPGR 421
Query: 494 FDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAAL 553
FDR V+V PDK+GREAILKVH + +PLAKD LG++A+ T GF+GADL NLVNEAAL
Sbjct: 422 FDRRVVVNLPDKVGREAILKVHT--RSVPLAKDASLGELAAATPGFSGADLRNLVNEAAL 479
Query: 554 LAGRLNKVVVEKIDFIHAVERSIAGIEK 581
+A R ++ V DF+ A+E+ + G E+
Sbjct: 480 MAARRDQDDVRARDFLDALEKIVLGPER 507
>sp|P73437|FTSH4_SYNY3 ATP-dependent zinc metalloprotease FtsH 4 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH4 PE=2 SV=1
Length = 628
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 220/469 (46%), Positives = 289/469 (61%), Gaps = 43/469 (9%)
Query: 135 FKWQPIIQAQEIGVLLLQLGIVMFVMRLLRPGIPLPGSEPRTSTTFVSVPYSDFLSKINS 194
K QP Q + VLL I + V LL P L S+P VPYS F+ ++
Sbjct: 3 IKPQPQWQRRLASVLLWGSTIYLLV-NLLAPA--LFRSQPP------QVPYSLFIDQVEG 53
Query: 195 NQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIK 254
++VA V V I ++LK + + E + +E + TP D++
Sbjct: 54 DKVASVYVGQNEIRYQLKPEAEDEGKE------KAAEGQILRTTPI----------FDLE 97
Query: 255 TPYEKMLENQ-VEFGS--PDKRS--GGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQV 309
P K LE + +EF + P K S G L+ + L +V + + L+R + G +
Sbjct: 98 LP--KRLEAKGIEFAAAPPAKNSWFGTLLSWVIPPLIFVGIWSFFLNRN--NNGAPGGAL 153
Query: 310 GHRKTRGPGGAKVSEQGDT--ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRG 367
K++ AKV +GD+ +TF DVAGV+EAK EL E+V+FL+ P +Y LGA+ P+G
Sbjct: 154 AFTKSK----AKVYVEGDSTKVTFDDVAGVEEAKTELSEVVDFLKFPQRYTALGAKIPKG 209
Query: 368 VLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSI 427
VLLVG PGTGKTLLAKA AGEA VPF S SEFVEL+VG GA+RVRDLF +AKK+AP I
Sbjct: 210 VLLVGPPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCI 269
Query: 428 IFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSA-VIVLGATNRSDVLDP 486
+FIDE+DA+ KSR + NDEREQTLNQLLTEMDGF + A VIVL ATNR + LDP
Sbjct: 270 VFIDELDAIGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAGATVIVLAATNRPETLDP 329
Query: 487 ALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLAN 546
AL RPGRFDR V+V+ PD GR IL+++ K++ L K+++L +IA+ T GF GADLAN
Sbjct: 330 ALLRPGRFDRQVLVDRPDLAGRLKILEIYA--KKIKLDKEVELKNIATRTPGFAGADLAN 387
Query: 547 LVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
LVNEAALLA R + V + DF A+ER +AG+EKK+ L EK +VA
Sbjct: 388 LVNEAALLAARNKQDSVTEADFREAIERVVAGLEKKSRVLSDKEKKIVA 436
>sp|B8J992|FTSH_ANAD2 ATP-dependent zinc metalloprotease FtsH OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=ftsH PE=3
SV=1
Length = 706
Score = 336 bits (861), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/334 (53%), Positives = 239/334 (71%), Gaps = 18/334 (5%)
Query: 271 DKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGG--------AKV 322
D +GG + L ++ + GLL + + +GQ+G GP G A++
Sbjct: 142 DAVAGGGMGD-LFWVWIAPIAIGLLF-WAWVMRRMSGQLGQ----GPPGVMAFGKSRARI 195
Query: 323 SEQGDT-ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLL 381
+ DT +TF D AG+DEA EEL+EIVEFL++P+KY RLG R P+GVLLVG PGTGKTLL
Sbjct: 196 HMEPDTGVTFQDAAGIDEAVEELQEIVEFLKTPEKYRRLGGRIPKGVLLVGPPGTGKTLL 255
Query: 382 AKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 441
A+A AGEA VPF S S SEFVE++VG+GA+RVRDLFA+A ++AP I+FIDE+DA+ KSR+
Sbjct: 256 ARATAGEAGVPFFSLSGSEFVEMFVGVGAARVRDLFAQATQKAPCIVFIDELDALGKSRN 315
Query: 442 GRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVE 501
+ +DEREQTLNQLL EMDGFD+ + +I++GATNR ++LDPAL RPGRFDR V+V+
Sbjct: 316 AGI-MGGHDEREQTLNQLLAEMDGFDARAGLIIMGATNRPEILDPALLRPGRFDRQVLVD 374
Query: 502 TPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKV 561
PDK GRE IL++H + + L D+DL +A+ T GF GADLAN+VNEAALLA R NK
Sbjct: 375 RPDKRGREQILRIHA--RNVKLGPDVDLRSVAARTPGFAGADLANVVNEAALLAARRNKN 432
Query: 562 VVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
V + +F A+ER +AG+EKK+ ++ EK +VA
Sbjct: 433 HVTRAEFEEAIERVVAGLEKKSRRINEREKEIVA 466
>sp|B2UE66|FTSH_RALPJ ATP-dependent zinc metalloprotease FtsH OS=Ralstonia pickettii
(strain 12J) GN=ftsH PE=3 SV=1
Length = 714
Score = 335 bits (860), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 204/428 (47%), Positives = 267/428 (62%), Gaps = 30/428 (7%)
Query: 178 TTFVS-----VPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKF--QES 230
T FVS +PYSDF + + ++ V + I +G I N Q+
Sbjct: 93 TLFVSGHVETIPYSDFKVLLKAGKLKDVAIGEQAISGTFSTEG-------IDNLLAKQQI 145
Query: 231 ESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEF-GSPD-KRSGGFLNSALIALFYV 288
E + + ++T R +D + +++ +V F G PD K L+ + A+ +
Sbjct: 146 EEIRREAKGDH--AFSTLRVADPEL-VQELEAAKVRFVGQPDNKWLSTILSWVVPAVIFF 202
Query: 289 AVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDT-ITFADVAGVDEAKEELEEI 347
+ + L+ R G G G AKV Q +T +TFADVAG+DEAKEEL EI
Sbjct: 203 GIWSFLIKR-------VGGAAGSMMEIGKSKAKVYMQKETGVTFADVAGIDEAKEELSEI 255
Query: 348 VEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVG 407
V FL+ P +Y RLG + P+GVLLVG PGTGKTLLAKAVAGEA VPF S S S+FVE++VG
Sbjct: 256 VSFLKDPQRYQRLGGKIPKGVLLVGAPGTGKTLLAKAVAGEAGVPFFSMSGSDFVEMFVG 315
Query: 408 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFD 467
+GA+RVRDLF +A+ +AP IIFIDE+DA+ K+R + N+EREQTLNQLL EMDGFD
Sbjct: 316 VGAARVRDLFKQAETKAPCIIFIDELDALGKTR-ALNAVGGNEEREQTLNQLLVEMDGFD 374
Query: 468 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDI 527
SN VI++ ATNR ++LDPAL RPGRFDR V ++ PD GRE ILKVHV K + LA ++
Sbjct: 375 SNKGVIIMAATNRPEILDPALLRPGRFDRHVALDRPDLKGREQILKVHV--KGVVLAPEV 432
Query: 528 DLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLK 587
DL +A T GF GADLANLVNEAALLA R +K +VE DF A++R + G+EKK +
Sbjct: 433 DLTKLAGRTPGFAGADLANLVNEAALLAARKSKQMVEMADFDEALDRIVGGLEKKNRVMN 492
Query: 588 GSEKAVVA 595
EK +A
Sbjct: 493 PKEKETIA 500
>sp|A6QBN8|FTSH_SULNB ATP-dependent zinc metalloprotease FtsH OS=Sulfurovum sp. (strain
NBC37-1) GN=ftsH PE=3 SV=1
Length = 671
Score = 335 bits (858), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 173/273 (63%), Positives = 213/273 (78%), Gaps = 3/273 (1%)
Query: 323 SEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLA 382
SE+ DT F DV GV+EAK+E++EIV+FL+ P++YI LGA+ P+GVLLVG PGTGKTLLA
Sbjct: 176 SEKPDT-RFDDVQGVEEAKDEVKEIVDFLKFPERYIELGAKIPKGVLLVGPPGTGKTLLA 234
Query: 383 KAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG 442
KAVAGEA VPF S S S F+E++VG+GASRVRDLFA+AKKEAPSIIFIDEIDA+ KSR
Sbjct: 235 KAVAGEASVPFFSVSGSGFIEMFVGVGASRVRDLFAQAKKEAPSIIFIDEIDAIGKSRAS 294
Query: 443 RFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVET 502
++ NDEREQTLNQLL EMDGF +++ VIVL ATNR + LD AL R GRFDR V+V+
Sbjct: 295 GGQMGGNDEREQTLNQLLAEMDGFGTDTPVIVLAATNRPETLDAALLRAGRFDRQVLVDK 354
Query: 503 PDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVV 562
PD GR AILKVH K++ LA ++DL +A T G GADLAN++NEAALLAGR NK
Sbjct: 355 PDFEGRLAILKVH--SKDVKLAPNVDLEIVAKQTAGLAGADLANIINEAALLAGRQNKKQ 412
Query: 563 VEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
+E+ D + A+ERS G+EKK K+ +EK +VA
Sbjct: 413 IEQSDLLEAIERSFVGLEKKNRKINETEKKIVA 445
>sp|A0LN68|FTSH_SYNFM ATP-dependent zinc metalloprotease FtsH OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=ftsH PE=3 SV=1
Length = 647
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 200/390 (51%), Positives = 253/390 (64%), Gaps = 26/390 (6%)
Query: 213 NDGSIQ----ESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEFG 268
+DG++Q E + IT +E++ P +R + T R D + L Q+E
Sbjct: 77 HDGNVQNLVIEHDRITGTMKENDG------PGRR--FNTIRVEDPE------LVKQLE-- 120
Query: 269 SPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKV---SEQ 325
+ + R G + + + L +L + F SF G + G A+V +E+
Sbjct: 121 AKNIRFSGDVQNPWLGLITWWLLPFAIMIFFWSFLMRRMGGGPQGVLSVGKARVKIFAEK 180
Query: 326 GDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAV 385
TITF DVAG+DEAK ELEEIV+FL+ P K+ RLG R P+GVLLVG PGTGKTLLAKAV
Sbjct: 181 EITITFDDVAGIDEAKGELEEIVQFLKDPGKFQRLGGRIPKGVLLVGAPGTGKTLLAKAV 240
Query: 386 AGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFR 445
AGEA VPF S S SEFVE++VG+GA+RVRDLF +AK AP IIFIDE+DA+ K+R G
Sbjct: 241 AGEAGVPFFSMSGSEFVEMFVGVGAARVRDLFGQAKDHAPCIIFIDELDALGKAR-GLNP 299
Query: 446 IVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDK 505
I +DEREQTLNQLL EMDGFD S VI++ ATNR ++LDPAL RPGRFDR V ++ PD
Sbjct: 300 IGGHDEREQTLNQLLVEMDGFDPRSGVIIMAATNRPEILDPALLRPGRFDRHVAIDKPDI 359
Query: 506 IGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEK 565
GREAIL+VHV KE+ L ++DL IA MT GF GADLANLVNEAAL+A R ++ V
Sbjct: 360 RGREAILRVHV--KEVKLGSEVDLKKIAGMTPGFVGADLANLVNEAALVAARRDRDEVTM 417
Query: 566 IDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
DF A +R I G+EKK + EK +VA
Sbjct: 418 ADFQEAADRIIGGLEKKNRAMNPKEKEIVA 447
>sp|D1C8C0|FTSH4_SPHTD ATP-dependent zinc metalloprotease FtsH 4 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsh4 PE=3
SV=1
Length = 658
Score = 333 bits (854), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/426 (45%), Positives = 265/426 (62%), Gaps = 19/426 (4%)
Query: 176 TSTTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLK 235
+S +++PYS F+ ++ V+ V + G + + + +V++ + +
Sbjct: 50 SSGARLNIPYSAFIQQVEGENVSSVTIRGQRVSGTFTEEVRVAGDQVLS----PGDPVPP 105
Query: 236 SVTPTK---RIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLA 292
+P + + TT P + +T +L++ D+ G S L + + +
Sbjct: 106 GTSPNEIRTGTQFQTTIPENSQTELVPLLQSHGVTVKIDQAGGSVWPSLLATIVPLFLFI 165
Query: 293 GLLHRFPVSFS---QTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVE 349
GL+ S S Q G K R + +TFADVAG +EAK EL E+V+
Sbjct: 166 GLMVYLGRSMSRGQQNVFSFGRSKAR-----VYDAERPRVTFADVAGEEEAKAELSEVVD 220
Query: 350 FLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMG 409
FLR+P KY +GAR PRG+LLVG PGTGKTLLA+AVAGEA VPF S SASEFVE++VG+G
Sbjct: 221 FLRNPMKYHAIGARLPRGILLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGVG 280
Query: 410 ASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSN 469
ASRVRDLF RAK APSI+F+DE+DAV + R NDEREQTLNQLL EMDGF+ +
Sbjct: 281 ASRVRDLFERAKASAPSIMFVDELDAVGRQRFAGLG-GGNDEREQTLNQLLVEMDGFEPH 339
Query: 470 SAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDL 529
VIV+ ATNR DVLDPAL RPGRFDR V V PD+ GREAIL++H + +P+A D+DL
Sbjct: 340 QDVIVIAATNRPDVLDPALLRPGRFDRQVTVGLPDRRGREAILRIHT--RGIPVADDLDL 397
Query: 530 GDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGS 589
++A+ T GF+GADLANLVNEAAL+A R NK +VE+IDF A+++ + G E+ +
Sbjct: 398 EELAAATPGFSGADLANLVNEAALMAARKNKKIVERIDFDEALDKIVLGTERAMI-MSEH 456
Query: 590 EKAVVA 595
+K VVA
Sbjct: 457 DKRVVA 462
>sp|O32617|FTSH_HELFC ATP-dependent zinc metalloprotease FtsH OS=Helicobacter felis
(strain ATCC 49179 / NCTC 12436 / CS1) GN=ftsH PE=3 SV=1
Length = 638
Score = 331 bits (849), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 175/283 (61%), Positives = 213/283 (75%), Gaps = 5/283 (1%)
Query: 316 GPGGAK--VSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGL 373
G G +K ++ + + F D+AG +EAKEE+ EIV+FL+ PD+Y LGA+ P+GVLLVG
Sbjct: 158 GMGSSKKLINAEKPKVRFNDMAGNEEAKEEVVEIVDFLKYPDRYASLGAKIPKGVLLVGP 217
Query: 374 PGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEI 433
PGTGKTLLAKAVAGEA VPF S S F+E++VG+GASRVRDLF AKKEAPSIIFIDEI
Sbjct: 218 PGTGKTLLAKAVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEI 277
Query: 434 DAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDS-NSAVIVLGATNRSDVLDPALRRPG 492
DA+ KSR I NDEREQTLNQLL EMDGF S N+ VIVL ATNR ++LDPAL RPG
Sbjct: 278 DAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALLRPG 337
Query: 493 RFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAA 552
RFDR V+V+ PD GR ILKVH+ K + LA D+DL +IA +T G GADLAN++NEAA
Sbjct: 338 RFDRQVLVDKPDFKGRVEILKVHI--KPVKLANDVDLQEIAKLTAGLAGADLANIINEAA 395
Query: 553 LLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
LLAGR N+ V++ AVER IAG+EKK+ ++ EK +VA
Sbjct: 396 LLAGRNNQKEVKQQHLKEAVERGIAGLEKKSRRISPKEKKIVA 438
>sp|D0MGU8|FTSH_RHOM4 ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus
(strain ATCC 43812 / DSM 4252 / R-10) GN=ftsH PE=3 SV=1
Length = 697
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/436 (45%), Positives = 267/436 (61%), Gaps = 30/436 (6%)
Query: 176 TSTTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEV----ITNKFQESE 231
T T ++ YS FL + V +VE I+ K G E+ V ++ ++++
Sbjct: 51 TGTDTSTIEYSQFLEYVEKGYVERVE-----IVNDTKVQGRFTEAAVREGLVSVPVRQTD 105
Query: 232 SLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQ---------VEFGS--PDKRSGGFLNS 280
L + TP +TTT+P+D + N+ V+F + + GG L
Sbjct: 106 LLRGAQTPELIRRFTTTKPADHDLTSFLLAYNERARAEGRPTVQFTARIEENWFGGLLTW 165
Query: 281 ALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGD-TITFADVAGVDE 339
+ VA+ LL R +S S +G + GD +TF DVAG+DE
Sbjct: 166 IFPLILIVALWVFLLRR--MSPSSQVLNIGKNR-----AILYDAMGDHRVTFKDVAGLDE 218
Query: 340 AKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSAS 399
AKEE+ EIVEFL++P K+ RLG + P+GVLLVG PGTGKTLLAKAVAGEA VPF S S S
Sbjct: 219 AKEEVAEIVEFLKNPKKFTRLGGKLPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGS 278
Query: 400 EFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQL 459
+FVE++VG+GA+RVRDLF +AK++AP IIFIDEIDA+ +SR + +NDERE TLNQL
Sbjct: 279 DFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDAIGRSRGRGIMMGANDERENTLNQL 338
Query: 460 LTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKK 519
L EMDGF+++ VI++ ATNR DVLDPAL RPGRFDR ++++ PD+ R I KVH +
Sbjct: 339 LVEMDGFNTDKGVIIMAATNRPDVLDPALLRPGRFDRQILIDKPDRRERLEIFKVHT--R 396
Query: 520 ELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGI 579
+L L D+DL +A T GF GA++AN+ NEAALLA R K VE DF A++R IAG+
Sbjct: 397 DLILGDDVDLEVLAGQTPGFAGAEIANVCNEAALLAARKGKEAVEMEDFEQAIDRVIAGL 456
Query: 580 EKKTAKLKGSEKAVVA 595
EKK + E+ +VA
Sbjct: 457 EKKNKIISPEEREIVA 472
>sp|Q9ZM66|FTSH_HELPJ ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain J99) GN=ftsH PE=3 SV=1
Length = 632
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/359 (51%), Positives = 238/359 (66%), Gaps = 12/359 (3%)
Query: 240 TKRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFP 299
R++Y R D+ T + E ++ + + + F L L + V+ GL
Sbjct: 83 NNRVIYIAKRVPDL-TLVPLLDEKKINYSGFSESN--FFTDMLGWLMPILVILGLWMFMA 139
Query: 300 VSFSQTAGQVGHRKTRGPGGAK--VSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKY 357
+ G G G AK ++ + + F D+AG +EAKEE+ EIV+FL+ P++Y
Sbjct: 140 NRMQKNMGG----GIFGMGSAKKLINAEKPNVRFNDMAGNEEAKEEVVEIVDFLKYPERY 195
Query: 358 IRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLF 417
LGA+ P+GVLLVG PGTGKTLLAKAVAGEA VPF S S F+E++VG+GASRVRDLF
Sbjct: 196 ANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLF 255
Query: 418 ARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDS-NSAVIVLG 476
AKK+APSIIFIDEIDA+ KSR I NDEREQTLNQLL EMDGF S N+ VIVL
Sbjct: 256 ETAKKQAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLA 315
Query: 477 ATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMT 536
ATNR ++LDPAL RPGRFDR V+V+ PD GR ILKVH+ K + LA D++L ++A +T
Sbjct: 316 ATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHI--KGVKLANDVNLQEVAKLT 373
Query: 537 TGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
G GADLAN++NEAALLAGR N+ V++ AVER IAG+EKK+ ++ EK +VA
Sbjct: 374 AGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLEKKSRRISPKEKKIVA 432
>sp|Q6MJV1|FTSH2_BDEBA ATP-dependent zinc metalloprotease FtsH 2 OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=ftsH2 PE=3 SV=1
Length = 615
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 189/421 (44%), Positives = 256/421 (60%), Gaps = 30/421 (7%)
Query: 177 STTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKS 236
S T +PYS + S + V + V HI +F++ ++ KS
Sbjct: 28 SRTVQQIPYSQYESLVKQGDVQNLIVTENHI----------------RGEFKQPQNGFKS 71
Query: 237 VTPTKRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLH 296
+ S Y + +EN L+ + AL +VAV
Sbjct: 72 FVTNRVEPELAKELSGAGVTYRREIENTF--------FRDLLSWVVPALIFVAVFL---- 119
Query: 297 RFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDK 356
F F++ G G G +E G ++F DVAGV+EAK EL E+V+FL+SP +
Sbjct: 120 YFSRKFAEKGGMSGLMSVGKSGARLYAETGVKVSFGDVAGVEEAKAELYEVVQFLKSPQE 179
Query: 357 YIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDL 416
+ RLGAR P+G+LLVG PGTGKTLLAKAVAGEA+VPF S + SEFVE++VG+GA+RVRDL
Sbjct: 180 FGRLGARMPKGILLVGPPGTGKTLLAKAVAGEAQVPFYSITGSEFVEMFVGVGAARVRDL 239
Query: 417 FARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLG 476
F +A+K AP IIFIDE+DA+ K R +DE+EQTLNQLL E+DGFDS S V++L
Sbjct: 240 FEQARKNAPCIIFIDELDALGKVRGVAGSFGGHDEKEQTLNQLLAELDGFDSRSGVVILA 299
Query: 477 ATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMT 536
ATNR +VLDPAL R GRFDR V+V+ PD+ GRE IL+VH+ K + A +++ +A +T
Sbjct: 300 ATNRPEVLDPALLRAGRFDRQVLVDRPDRTGREQILRVHLKKIKADEALNVE--HLAHLT 357
Query: 537 TGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVAR 596
+GFTGAD+ANL+NEAA++A R V + DF+ A+ER +AG+EKK+ L EKA+VA
Sbjct: 358 SGFTGADIANLINEAAMVATRRKAETVNEKDFVAAIERIVAGLEKKSRLLNEKEKAIVAH 417
Query: 597 Q 597
Sbjct: 418 H 418
>sp|B9KXV3|FTSH1_THERP ATP-dependent zinc metalloprotease FtsH 1 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH1 PE=3 SV=1
Length = 652
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/268 (63%), Positives = 208/268 (77%), Gaps = 3/268 (1%)
Query: 328 TITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
T+TF DVAGVDEAKEEL+EIVEFL+ P+K+ LGAR PRGVLLVG PGTGKTLL++AVAG
Sbjct: 159 TVTFDDVAGVDEAKEELQEIVEFLKYPEKFAALGARIPRGVLLVGPPGTGKTLLSRAVAG 218
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
EA VPF S S SEFVE++VG+GASRVRDLF +AK+ AP I+FIDEIDAV + R G
Sbjct: 219 EAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFIDEIDAVGRQR-GAGLGG 277
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
S+DEREQTLNQ+L EMDGFDS++ VIV+ ATNR DVLDPAL RPGRFDR V+++ PD G
Sbjct: 278 SHDEREQTLNQILVEMDGFDSSTNVIVIAATNRPDVLDPALLRPGRFDRQVVLDRPDLHG 337
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKID 567
R AILKVH K PL D+DL D+A T GF+GADL NLVNEAA+LA R NK + + +
Sbjct: 338 RLAILKVHTRGK--PLESDVDLEDLARQTPGFSGADLENLVNEAAILAARRNKKTIGRRE 395
Query: 568 FIHAVERSIAGIEKKTAKLKGSEKAVVA 595
A++R +AG E+K+ ++ EK + A
Sbjct: 396 LYEAIDRVVAGPERKSRRISEREKLMTA 423
>sp|C6V4R9|FTSH_NEORI ATP-dependent zinc metalloprotease FtsH OS=Neorickettsia risticii
(strain Illinois) GN=ftsH PE=3 SV=1
Length = 636
Score = 329 bits (843), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 194/419 (46%), Positives = 261/419 (62%), Gaps = 45/419 (10%)
Query: 183 VPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTP--T 240
+ +S+FL + +V K+ ++G I +LKS T T
Sbjct: 38 IQFSEFLDLVEKGEVQKIVIEGYDI-----------------------SGVLKSGTRFYT 74
Query: 241 KRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSG-GFLNSALIALFYVAVLAGLLHRFP 299
K YT P + +N V+F S G L + LI+ F + +L G+
Sbjct: 75 KATQYTELIPL--------LRKNNVDFQVASGDSFLGLLFNILISWFPMLLLIGVW---- 122
Query: 300 VSFSQTAGQVGHRKTRGPGGAK---VSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDK 356
F Q G KT G +K +S++ + +TF DVAG+DEAKEEL EIVEFLR P K
Sbjct: 123 -IFFMKQMQAGGNKTMTFGKSKARLLSDRSNKVTFHDVAGIDEAKEELAEIVEFLREPKK 181
Query: 357 YIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDL 416
+ +LG + P+G LL+G PGTGKTLLAKA+AGEA+VPF S S S+FVE++VG+GASRVRD+
Sbjct: 182 FQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDM 241
Query: 417 FARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLG 476
F + KK AP +IFIDEIDAV + R F NDEREQTLNQLL EMDGF++N VI++
Sbjct: 242 FEQGKKNAPCLIFIDEIDAVGRHRGVGFG-GGNDEREQTLNQLLVEMDGFEANEGVIIIA 300
Query: 477 ATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMT 536
ATNR DVLDPAL RPGRFDR + + PD GR+ IL+VH+ K++P A ++++ IA T
Sbjct: 301 ATNRPDVLDPALLRPGRFDRQITISIPDIAGRQKILEVHL--KKIPTAPNVEVSIIARGT 358
Query: 537 TGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
GF+GADLANLVNE+AL+A R NK VV DF +A ++ + G+E+K+ ++ EK + A
Sbjct: 359 PGFSGADLANLVNESALIAARRNKKVVTNEDFEYARDKILMGMERKSLVMREEEKLLTA 417
>sp|Q3A579|FTSH_PELCD ATP-dependent zinc metalloprotease FtsH OS=Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1) GN=ftsH PE=3 SV=1
Length = 646
Score = 328 bits (842), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 199/450 (44%), Positives = 272/450 (60%), Gaps = 22/450 (4%)
Query: 149 LLLQLGIVMFVMRLLRPGIPLPGSEPRTSTTFVSVPYSDFLSKINSNQVAKVEVDGVHIM 208
LL Q+ IV+ + ++ L P+T V V YS F +++ ++ VA + +G +++
Sbjct: 5 LLWQMVIVLGAILMV--NYVLTTLTPQTQEPVVDVSYSRFKTELAADNVAAITFEGNNVV 62
Query: 209 FKLKNDGSIQESEVI--TNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVE 266
L+ + E F + + VT T+ + R D+K
Sbjct: 63 GNLRERTILNRVEGTEEVQSFLRFRTTMPPVTDTRLLDDLEQRKVDVKV----------- 111
Query: 267 FGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKV-SEQ 325
P+ + + + + L ++ ++ ++ G GAK+ +++
Sbjct: 112 --RPESKPSPWATAMIYMLPWLLIVGVWWFVIKGMRTRQGPGGGMMGGFSKSGAKMYTKE 169
Query: 326 GDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAV 385
+TFADVAG+DEAK+EL EI+EFLR+P K++RLGA+ PRGVLLVG PGTGKTL+A+AV
Sbjct: 170 RSRVTFADVAGLDEAKQELMEIIEFLRNPKKFMRLGAKAPRGVLLVGPPGTGKTLMARAV 229
Query: 386 AGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFR 445
AGEAEVPF + SAS+F+E++VG+GASRVRDLF AKK APSIIFIDE+DAV +SR G
Sbjct: 230 AGEAEVPFFTISASQFIEMFVGVGASRVRDLFNNAKKNAPSIIFIDELDAVGRSR-GTGL 288
Query: 446 IVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDK 505
NDEREQTLNQLL+EMDGF+++ VIV+ ATNR DVLDPAL RPGRFDR V VE PD
Sbjct: 289 GGGNDEREQTLNQLLSEMDGFEAHDEVIVMSATNRPDVLDPALLRPGRFDRQVTVERPDW 348
Query: 506 IGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEK 565
RE ILKVH +++P+ +D+DL IA T G GADL NLVNEAAL+A R N V
Sbjct: 349 RAREEILKVHT--RQVPIDEDVDLQIIARSTPGMCGADLENLVNEAALIAARENAQKVTM 406
Query: 566 IDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
F A +R + G E+K + EK + A
Sbjct: 407 QHFEQAKDRVLMGTERKLV-MSQQEKRITA 435
>sp|P71408|FTSH_HELPY ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=ftsH PE=1 SV=2
Length = 632
Score = 328 bits (842), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 184/359 (51%), Positives = 237/359 (66%), Gaps = 12/359 (3%)
Query: 240 TKRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFP 299
R++Y R D+ T + E ++ + + + F L L + V+ GL
Sbjct: 83 NNRVIYIAKRVPDL-TLVPLLDEKKINYSGFSESN--FFTDMLGWLMPILVILGLWMFMA 139
Query: 300 VSFSQTAGQVGHRKTRGPGGAK--VSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKY 357
+ G G G AK ++ + + F D+AG +EAKEE+ EIV+FL+ P++Y
Sbjct: 140 NRMQKNMGG----GIFGMGSAKKLINAEKPNVRFNDMAGNEEAKEEVVEIVDFLKYPERY 195
Query: 358 IRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLF 417
LGA+ P+GVLLVG PGTGKTLLAKAVAGEA VPF S S F+E++VG+GASRVRDLF
Sbjct: 196 ANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLF 255
Query: 418 ARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDS-NSAVIVLG 476
AKK+APSIIFIDEIDA+ KSR + NDEREQTLNQLL EMDGF S N+ VIVL
Sbjct: 256 ETAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLA 315
Query: 477 ATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMT 536
ATNR ++LDPAL RPGRFDR V+V+ PD GR ILKVH+ K + LA D++L ++A +T
Sbjct: 316 ATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHI--KGVKLANDVNLQEVAKLT 373
Query: 537 TGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
G GADLAN++NEAALLAGR N+ V + AVER IAG+EKK+ ++ EK +VA
Sbjct: 374 AGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEKKSRRISPKEKKIVA 432
>sp|D1C1U7|FTSH1_SPHTD ATP-dependent zinc metalloprotease FtsH 1 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsH1 PE=3
SV=1
Length = 653
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/268 (63%), Positives = 206/268 (76%), Gaps = 3/268 (1%)
Query: 328 TITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
T+TFADVAGV+EAKEEL E+VEFL+ PDK+ LGAR PRGVLLVG PGTGKTLL++AVAG
Sbjct: 159 TVTFADVAGVEEAKEELVEVVEFLKYPDKFASLGARIPRGVLLVGPPGTGKTLLSRAVAG 218
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
EA VPF S S SEFVE++VG+GASRVRDLF +AK+ AP I+FIDEIDAV + R G
Sbjct: 219 EAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFIDEIDAVGRQR-GAGLGG 277
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
S+DEREQTLNQ+L EMDGFDS + VIV+ ATNR DVLDPAL RPGRFDR V+++ PD G
Sbjct: 278 SHDEREQTLNQILVEMDGFDSTTNVIVIAATNRPDVLDPALLRPGRFDRQVVLDRPDIAG 337
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKID 567
R AIL+VH K PL D+DL ++A T GF+GADL NLVNEAA+LA R NK + + +
Sbjct: 338 RRAILEVHSRGK--PLESDVDLEELARQTPGFSGADLENLVNEAAILAARRNKKTIGRRE 395
Query: 568 FIHAVERSIAGIEKKTAKLKGSEKAVVA 595
A++R IAG E+K+ L EK + A
Sbjct: 396 LTEAIDRVIAGPERKSRVLSEREKLMTA 423
>sp|A1URA3|FTSH_BARBK ATP-dependent zinc metalloprotease FtsH OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ftsH PE=3 SV=1
Length = 764
Score = 327 bits (837), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 200/430 (46%), Positives = 265/430 (61%), Gaps = 45/430 (10%)
Query: 171 GSEPRTSTTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQES 230
G+ R S VS YS+FL KI++N++ V + G
Sbjct: 27 GNRQRASNGEVS--YSEFLQKIDNNELKTVTIQGQK------------------------ 60
Query: 231 ESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGG--FLNSALIALFYV 288
L T +R++ +T P D +++ N+V + + SG FLN L +L V
Sbjct: 61 ---LTGQTADRRMI-STYAPRDPGL-VQRLNTNKVNIRAVPESSGNSIFLN-LLFSLLPV 114
Query: 289 AVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAK---VSEQGDTITFADVAGVDEAKEELE 345
++ G F Q G G R G G +K ++E +TF DVAGV+EAK++L+
Sbjct: 115 LIIVGAWIFF---MRQMQG--GSRGALGFGKSKAKLLTEAQGRVTFKDVAGVEEAKQDLQ 169
Query: 346 EIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELY 405
EIV+FLR P K+ RLG R PRGVLLVG PGTGKTLLA+++AGEA VPF + S S+FVE++
Sbjct: 170 EIVDFLREPQKFQRLGGRIPRGVLLVGPPGTGKTLLARSIAGEANVPFFTISGSDFVEMF 229
Query: 406 VGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDG 465
VG+GASRVRD+F +AKK AP IIFIDEIDAV + R G NDEREQTLNQLL EMDG
Sbjct: 230 VGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHR-GAGLGGGNDEREQTLNQLLVEMDG 288
Query: 466 FDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAK 525
F+ N ++I++ ATNR DVLDPAL RPGRFDR V+V PD GRE IL+VHV + +PLA
Sbjct: 289 FEPNESIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDVAGREKILEVHV--RNVPLAP 346
Query: 526 DIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAK 585
+++L +A T GF+GADL NLVNEAAL+A NK VV +F A ++ + G E+++
Sbjct: 347 NVNLRVLARGTPGFSGADLMNLVNEAALMAASRNKKVVTMQEFEDAKDKVMMGAERRSTA 406
Query: 586 LKGSEKAVVA 595
+ EK + A
Sbjct: 407 MTQEEKELTA 416
>sp|Q3JMH0|FTSH_BURP1 ATP-dependent zinc metalloprotease FtsH OS=Burkholderia
pseudomallei (strain 1710b) GN=ftsH PE=3 SV=2
Length = 666
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 192/426 (45%), Positives = 263/426 (61%), Gaps = 26/426 (6%)
Query: 177 STTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKS 236
S + YSDF + Q+ +EV I L++ S ++E++ ++
Sbjct: 28 SAPATQIAYSDFRKLAAAAQLDDLEVSPTRITGVLRS-----ASAAAALPASDAEAIKRA 82
Query: 237 VTPTKRIVYTTTRPSDIKTPYEKMLENQVEFGS-----PDKRSGGFLNSALIALFYVAVL 291
TP + ++T R +D E++++ G+ D G L S ++ + A++
Sbjct: 83 GTPWR---FSTKRVTD-----ERLIDTLAATGTRYRGADDDTWIGTLASWIVPIAVFALV 134
Query: 292 AGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFL 351
L+ R P Q VG K R AK I F D+AG+DEAK EL++IV FL
Sbjct: 135 WNLMLRRPRGGLQDWSGVGKSKPRVYVEAKTG-----IDFDDIAGIDEAKAELQQIVAFL 189
Query: 352 RSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGAS 411
R+P +Y RLG + P+GVL+VG PGTGKTLLAKAVAGEA VPF S S S FVE++VG+GA+
Sbjct: 190 RAPARYQRLGGKIPKGVLIVGAPGTGKTLLAKAVAGEAGVPFFSTSGSSFVEMFVGVGAA 249
Query: 412 RVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSA 471
RVRDLF +A+++AP IIFIDE+DA+ K R G NDEREQTLNQLL EMDGF +NS
Sbjct: 250 RVRDLFEQAQQKAPCIIFIDELDALGKVR-GAGLASGNDEREQTLNQLLVEMDGFQANSG 308
Query: 472 VIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGD 531
VI++ ATNR ++LDPAL RPGRFDR + ++ PD GR IL VHV K + L D+DLG+
Sbjct: 309 VILMAATNRPEILDPALLRPGRFDRHIAIDRPDLTGRRQILSVHV--KHVKLGPDVDLGE 366
Query: 532 IASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEK 591
+AS T GF GADLAN+VNEAAL A L+K ++ DF A++R++ G+E+K+ + EK
Sbjct: 367 LASRTPGFVGADLANIVNEAALHAAELDKPAIDMSDFDEAIDRAMTGMERKSRVMSEREK 426
Query: 592 AVVARQ 597
+A
Sbjct: 427 ITIAHH 432
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 325 bits (832), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 191/404 (47%), Positives = 257/404 (63%), Gaps = 23/404 (5%)
Query: 181 VSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPT 240
VS+PY+ F ++ +N VA+V +++ IT +F+++ + P
Sbjct: 63 VSIPYTSFKQQLENNNVAEVTT----------------QADKITGEFKQAVKVPGVDQPV 106
Query: 241 KRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPV 300
KR V D + + + + P+ + L S LI+ F +L LL + +
Sbjct: 107 KRFVTHIPAFGDDQLMSQLDQKGVIVNVQPESSTRSLLLSILIS-FGPTILFFLLFLWLI 165
Query: 301 SFSQTA--GQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYI 358
S +Q++ G G K+R + + +TF DVAG++EAK+EL EIV+FL++P KY
Sbjct: 166 SKAQSSQQGLFGLGKSRA--KRYNATESTRVTFDDVAGIEEAKQELAEIVDFLKNPQKYQ 223
Query: 359 RLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFA 418
RLG P+GVLL+G PGTGKTLLA+AVAGEA VPF S S SEFVE+ VG+GA+RVR+LF
Sbjct: 224 RLGGTIPKGVLLIGPPGTGKTLLARAVAGEAGVPFFSMSGSEFVEMIVGVGAARVRELFQ 283
Query: 419 RAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGAT 478
+AKKEAP IIF+DE+DA+ + R + +DEREQTLNQLL EMDGFDS VIVL AT
Sbjct: 284 QAKKEAPCIIFVDELDAIGRRRGSSINVGGHDEREQTLNQLLVEMDGFDSRQGVIVLAAT 343
Query: 479 NRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTG 538
NR DVLDPAL RPGRFDR V+V+ PDK+GR IL+VH + +PL ++DL +IA+ T G
Sbjct: 344 NRPDVLDPALLRPGRFDRRVVVQRPDKVGRLKILQVHT--RNVPLDPNLDLSEIAAATPG 401
Query: 539 FTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKK 582
GADL NLVNEAALLA R K V++ DF A+E+ G E+K
Sbjct: 402 LVGADLRNLVNEAALLAARRGKNYVDREDFFDALEKITLGAERK 445
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 212/482 (43%), Positives = 288/482 (59%), Gaps = 35/482 (7%)
Query: 108 TSTDSPTSQRREKRNKSNGFWWSKGKKFKWQPIIQAQEIGVLLLQLGIVMF--VMRLLRP 165
+S D RE+R +S + GK + I G+L + +G+++F + + RP
Sbjct: 43 SSMDERNRTPREQRERSTNPF---GKALRG---IFGSRFGLLWIIVGLILFYNLYAVFRP 96
Query: 166 GIPLPGSEPRTSTTFVSVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITN 225
P SE + YS F++ + V+ V + G I DG + + N
Sbjct: 97 ERSGPQSE---------IAYSSFVAAVEKGLVSTVTLSGQTI------DGQFTQPLRVAN 141
Query: 226 K--FQESESLLKSVTPTK-RIV--YTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNS 280
+ E L +V P + R V + T P + + L+ G L
Sbjct: 142 GIVYLPGEPLPDTVDPAQVRSVTRFRTVIPENTQAEVTAFLQQHNVLLKVQPSGGASLPG 201
Query: 281 ALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSE-QGDTITFADVAGVDE 339
L+++ L GLL + S+ V + G A+V + + +TFADVAG +E
Sbjct: 202 LLLSVLPFVFLIGLLFLLGRNLSRGQQNV---FSFGRSRARVYDVERPQVTFADVAGEEE 258
Query: 340 AKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSAS 399
AK EL ++V+FL++P KY R+GAR PRGVLLVG PGTGKTLLA+AVAGEA VPF S SAS
Sbjct: 259 AKAELAQVVDFLKNPAKYHRIGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS 318
Query: 400 EFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQL 459
EFVE++VG+GASRVRDLF RAK +APSIIFIDE+DAV + R V NDEREQTLNQL
Sbjct: 319 EFVEMFVGVGASRVRDLFERAKAQAPSIIFIDELDAVGRQRFAGLG-VGNDEREQTLNQL 377
Query: 460 LTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKK 519
L EMDGF++++ V+V+ ATNR DVLDPAL RPGRFDR V+V PDK GR AIL++H +
Sbjct: 378 LVEMDGFEAHTDVVVIAATNRPDVLDPALLRPGRFDRQVVVGLPDKRGRAAILRIHT--R 435
Query: 520 ELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGI 579
+P+A D+DL +A+ T GF+GADLANLVNEAAL+A R K VV++ DF A+++ + G
Sbjct: 436 GIPIAPDVDLEGLAAATPGFSGADLANLVNEAALVAARRGKQVVDRSDFEEALDKMLLGT 495
Query: 580 EK 581
+
Sbjct: 496 TR 497
>sp|P63343|FTSH_SALTY ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ftsH PE=3 SV=1
Length = 644
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/417 (45%), Positives = 249/417 (59%), Gaps = 40/417 (9%)
Query: 183 VPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPTKR 242
V YS FL ++N +QV + ++G I +VT
Sbjct: 32 VDYSTFLQEVNQDQVREARINGREI----------------------------NVTKKDS 63
Query: 243 IVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSF 302
YTT P + + +L V+ L S I+ F + +L G+ F
Sbjct: 64 NRYTTYIPINDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWIFFMRQM 123
Query: 303 SQTAGQ----VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYI 358
G+ G K R ++E TFADVAG DEAKEE+ E+VE+LR P ++
Sbjct: 124 QGGGGKGAMSFGKSKAR-----MLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 359 RLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFA 418
+LG + P+GVL+VG PGTGKTLLAKA+AGEA+VPF + S S+FVE++VG+GASRVRD+F
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 419 RAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGAT 478
+AKK AP IIFIDEIDAV + R G +DEREQTLNQ+L EMDGF+ N +IV+ AT
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQR-GAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAAT 297
Query: 479 NRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTG 538
NR DVLDPAL RPGRFDR V+V PD GRE ILKVH+ + +PLA DID IA T G
Sbjct: 298 NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHM--RRVPLATDIDAAIIARGTPG 355
Query: 539 FTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
F+GADLANLVNEAAL A R NK VV ++F A ++ + G E+++ + ++K A
Sbjct: 356 FSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTA 412
>sp|P63344|FTSH_SALTI ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhi GN=ftsH
PE=3 SV=1
Length = 644
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/417 (45%), Positives = 249/417 (59%), Gaps = 40/417 (9%)
Query: 183 VPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPTKR 242
V YS FL ++N +QV + ++G I +VT
Sbjct: 32 VDYSTFLQEVNQDQVREARINGREI----------------------------NVTKKDS 63
Query: 243 IVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSF 302
YTT P + + +L V+ L S I+ F + +L G+ F
Sbjct: 64 NRYTTYIPINDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWIFFMRQM 123
Query: 303 SQTAGQ----VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYI 358
G+ G K R ++E TFADVAG DEAKEE+ E+VE+LR P ++
Sbjct: 124 QGGGGKGAMSFGKSKAR-----MLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 359 RLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFA 418
+LG + P+GVL+VG PGTGKTLLAKA+AGEA+VPF + S S+FVE++VG+GASRVRD+F
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 419 RAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGAT 478
+AKK AP IIFIDEIDAV + R G +DEREQTLNQ+L EMDGF+ N +IV+ AT
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQR-GAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAAT 297
Query: 479 NRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTG 538
NR DVLDPAL RPGRFDR V+V PD GRE ILKVH+ + +PLA DID IA T G
Sbjct: 298 NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHM--RRVPLATDIDAAIIARGTPG 355
Query: 539 FTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
F+GADLANLVNEAAL A R NK VV ++F A ++ + G E+++ + ++K A
Sbjct: 356 FSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTA 412
>sp|Q1LLA9|FTSH_RALME ATP-dependent zinc metalloprotease FtsH OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=ftsH PE=3 SV=1
Length = 649
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 192/416 (46%), Positives = 253/416 (60%), Gaps = 37/416 (8%)
Query: 182 SVPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPTK 241
SV YS F+ + +V++V+V G +++ V+P +
Sbjct: 50 SVTYSQFMDDAKNGKVSRVDVQGRNLV----------------------------VSPKE 81
Query: 242 RIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVA-VLAGLLHRFPV 300
YT P DI + M G D N + AL+Y+ L ++ F +
Sbjct: 82 GSKYTIISPGDIWMVGDLMKYGVQVTGKADDEP----NVLVQALYYLGPTLLIIVFWFYM 137
Query: 301 SFSQTAGQVGHRKTRGPGGAK-VSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIR 359
G G + G A+ + E + +TFADVAG DE+KEE+ E+V+FL+ P K+ +
Sbjct: 138 MRQMQGGGKGGAFSFGKSRARLIDENQNAVTFADVAGCDESKEEVVELVDFLKDPQKFQK 197
Query: 360 LGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFAR 419
LG R PRGVLLVG PGTGKTLLA+A+AGEA+VPF S S S+FVE++VG+GA+RVRD+F
Sbjct: 198 LGGRIPRGVLLVGPPGTGKTLLARAIAGEAKVPFFSISGSDFVEMFVGVGAARVRDMFEN 257
Query: 420 AKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATN 479
AKK+AP I+FIDEIDAV + R G NDEREQTLNQ+L EMDGF++NS VIV+ ATN
Sbjct: 258 AKKQAPCIVFIDEIDAVGRHR-GAGMGGGNDEREQTLNQMLVEMDGFEANSGVIVIAATN 316
Query: 480 RSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGF 539
R+DVLD AL RPGRFDR V V PD GRE ILKVH+ K +P+ D+D IA T GF
Sbjct: 317 RADVLDKALLRPGRFDRQVYVGLPDIRGREQILKVHMRK--VPIGNDVDASIIARGTPGF 374
Query: 540 TGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
+GADLANLVNEAAL A R +K VV+ DF A ++ G E+K+ ++ E+ A
Sbjct: 375 SGADLANLVNEAALFAARRSKRVVDMQDFEDAKDKIYMGPERKSTVMREEERKATA 430
>sp|P71377|FTSH_HAEIN ATP-dependent zinc metalloprotease FtsH OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ftsH PE=3
SV=1
Length = 635
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 249/382 (65%), Gaps = 13/382 (3%)
Query: 217 IQESEVITNKFQESESLLKSVTPTKRIVYTTTRPS-DIKTPYEKMLENQVEF-GSPDKRS 274
+ +V +F +E +VT T Y+T P + K + +L +V+ G+P +R
Sbjct: 40 VSNGQVTAARFDANEI---TVTKTDGSKYSTVMPPLEDKKLLDDLLSKKVKVEGTPFERR 96
Query: 275 GGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTRGPGGAKVSEQGDT-ITFAD 333
G FL+ LI+ F + L G+ F Q G G + G AK+ Q +TFAD
Sbjct: 97 G-FLSQILISWFPMLFLVGVWVFF---MRQMQGGGGKAMSFGKSRAKMLNQDQIKVTFAD 152
Query: 334 VAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPF 393
VAG DEAKEE+ EIV+FLR P+K+ LG + P+G+L+VG PGTGKTLLA+A+AGEA+VPF
Sbjct: 153 VAGCDEAKEEVGEIVDFLRDPNKFQNLGGKIPKGILMVGPPGTGKTLLARAIAGEAKVPF 212
Query: 394 ISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDERE 453
+ S S+FVE++VG+GASRVRD+F +AKK AP +IFIDEIDAV + R G +DERE
Sbjct: 213 FTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQR-GAGLGGGHDERE 271
Query: 454 QTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILK 513
QTLNQ+L EMDGF N VIV+ ATNR DVLDPAL RPGRFDR V+V PD GRE ILK
Sbjct: 272 QTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILK 331
Query: 514 VHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVE 573
VH+ K + +A+D+D +A T G++GADLANLVNEAAL A R+NK V ++F A +
Sbjct: 332 VHMRK--VSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKD 389
Query: 574 RSIAGIEKKTAKLKGSEKAVVA 595
+ G E++T + +K A
Sbjct: 390 KINMGPERRTMIMTDKQKESTA 411
>sp|P0AAI4|FTSH_SHIFL ATP-dependent zinc metalloprotease FtsH OS=Shigella flexneri
GN=ftsH PE=3 SV=1
Length = 644
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/417 (45%), Positives = 249/417 (59%), Gaps = 40/417 (9%)
Query: 183 VPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPTKR 242
V YS FL ++N++QV + ++G I +VT
Sbjct: 32 VDYSTFLQEVNNDQVREARINGREI----------------------------NVTKKDS 63
Query: 243 IVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSF 302
YTT P + +L V+ L S I+ F + +L G+ F
Sbjct: 64 NRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWIFFMRQM 123
Query: 303 SQTAGQ----VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYI 358
G+ G K R ++E TFADVAG DEAKEE+ E+VE+LR P ++
Sbjct: 124 QGGGGKGAMSFGKSKAR-----MLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 359 RLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFA 418
+LG + P+GVL+VG PGTGKTLLAKA+AGEA+VPF + S S+FVE++VG+GASRVRD+F
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 419 RAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGAT 478
+AKK AP IIFIDEIDAV + R G +DEREQTLNQ+L EMDGF+ N +IV+ AT
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQR-GAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAAT 297
Query: 479 NRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTG 538
NR DVLDPAL RPGRFDR V+V PD GRE ILKVH+ + +PLA DID IA T G
Sbjct: 298 NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHM--RRVPLAPDIDAAIIARGTPG 355
Query: 539 FTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
F+GADLANLVNEAAL A R NK VV ++F A ++ + G E+++ + ++K A
Sbjct: 356 FSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTA 412
>sp|P0AAI3|FTSH_ECOLI ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli (strain
K12) GN=ftsH PE=1 SV=1
Length = 644
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/417 (45%), Positives = 249/417 (59%), Gaps = 40/417 (9%)
Query: 183 VPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPTKR 242
V YS FL ++N++QV + ++G I +VT
Sbjct: 32 VDYSTFLQEVNNDQVREARINGREI----------------------------NVTKKDS 63
Query: 243 IVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSF 302
YTT P + +L V+ L S I+ F + +L G+ F
Sbjct: 64 NRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWIFFMRQM 123
Query: 303 SQTAGQ----VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYI 358
G+ G K R ++E TFADVAG DEAKEE+ E+VE+LR P ++
Sbjct: 124 QGGGGKGAMSFGKSKAR-----MLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 359 RLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFA 418
+LG + P+GVL+VG PGTGKTLLAKA+AGEA+VPF + S S+FVE++VG+GASRVRD+F
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 419 RAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGAT 478
+AKK AP IIFIDEIDAV + R G +DEREQTLNQ+L EMDGF+ N +IV+ AT
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQR-GAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAAT 297
Query: 479 NRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTG 538
NR DVLDPAL RPGRFDR V+V PD GRE ILKVH+ + +PLA DID IA T G
Sbjct: 298 NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHM--RRVPLAPDIDAAIIARGTPG 355
Query: 539 FTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
F+GADLANLVNEAAL A R NK VV ++F A ++ + G E+++ + ++K A
Sbjct: 356 FSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTA 412
>sp|Q8X9L0|FTSH_ECO57 ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli O157:H7
GN=ftsH PE=3 SV=1
Length = 644
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 191/417 (45%), Positives = 249/417 (59%), Gaps = 40/417 (9%)
Query: 183 VPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPTKR 242
V YS FL ++N++QV + ++G I +VT
Sbjct: 32 VDYSTFLQEVNNDQVREARINGREI----------------------------NVTKKDS 63
Query: 243 IVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSF 302
YTT P + +L V+ L S I+ F + +L G+ F
Sbjct: 64 NRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWIFFMRQM 123
Query: 303 SQTAGQ----VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYI 358
G+ G K R ++E TFADVAG DEAKEE+ E+VE+LR P ++
Sbjct: 124 QGGGGKGAMSFGKSKAR-----MLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 359 RLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFA 418
+LG + P+GVL+VG PGTGKTLLAKA+AGEA+VPF + S S+FVE++VG+GASRVRD+F
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 419 RAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGAT 478
+AKK AP IIFIDEIDAV + R G +DEREQTLNQ+L EMDGF+ N +IV+ AT
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQR-GAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAAT 297
Query: 479 NRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTG 538
NR DVLDPAL RPGRFDR V+V PD GRE ILKVH+ + +PLA DID IA T G
Sbjct: 298 NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHM--RRVPLAPDIDAAIIARGTPG 355
Query: 539 FTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
F+GADLANLVNEAAL A R NK VV ++F A ++ + G E+++ + ++K A
Sbjct: 356 FSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTA 412
>sp|P57462|FTSH_BUCAI ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=ftsH PE=3
SV=2
Length = 611
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/417 (45%), Positives = 251/417 (60%), Gaps = 40/417 (9%)
Query: 183 VPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPTKR 242
V YS FLS++N +Q+ + ++G I SVT
Sbjct: 32 VDYSTFLSEVNQDQIREAYINGRMI----------------------------SVTKKDS 63
Query: 243 IVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSF 302
YTT P + + +L +V+ S LI+ F + +L G+ F
Sbjct: 64 SKYTTYIPINDPKLLDNLLVKRVKIIGAIPEEPSLFISILISWFPMLLLIGVWIFFMRQM 123
Query: 303 SQTAGQ----VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYI 358
G+ G K R +SE TFADVAG DEAKEE+ E+VE+L+ P ++
Sbjct: 124 QMGGGKGAMSFGKSKAR-----MLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQ 178
Query: 359 RLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFA 418
+LG + P+G+L+VG PGTGKTLLAKA+AGEA+VPF + S S+FVE++VG+GASRVRD+F
Sbjct: 179 KLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 419 RAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGAT 478
++K AP IIFIDEIDAV + R G +DEREQTLNQ+L EMDGFD N +I++ AT
Sbjct: 239 HSRKSAPCIIFIDEIDAVGRQR-GAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAAT 297
Query: 479 NRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTG 538
NR DVLDPAL RPGRFDR V+V PD GRE ILKVH+ K +PL+KD+D IA T G
Sbjct: 298 NRPDVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRK--VPLSKDVDPMIIARGTPG 355
Query: 539 FTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
F+GADLANLVNEAAL A RL+K VV ++F A ++ + G E+++ + +K A
Sbjct: 356 FSGADLANLVNEAALFAARLDKRVVSMLEFERAKDKMMMGSERRSMVMSDFQKESTA 412
>sp|C1F8X6|FTSH_ACIC5 ATP-dependent zinc metalloprotease FtsH OS=Acidobacterium
capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
GN=ftsH PE=3 SV=1
Length = 639
Score = 322 bits (826), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 188/350 (53%), Positives = 231/350 (66%), Gaps = 14/350 (4%)
Query: 250 PSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQ- 308
P++ Y+ + +N V D SG S LI V VL L F + Q+ G
Sbjct: 77 PTNYPQLYDILNKNHVAVTVKDN-SGSPWWSILIQFSPVLVLVALWF-FMIRQMQSGGNK 134
Query: 309 ---VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPP 365
G + R +S Q +TF DVAGVDEAKEEL+EI+EFLR K+ +LG R P
Sbjct: 135 ALSFGKSRAR-----LLSMQQKKVTFKDVAGVDEAKEELKEIIEFLREAQKFQKLGGRIP 189
Query: 366 RGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAP 425
+GVLLVG PGTGKTLLA+AVAGEA VPF S S S+FVE++VG+GASRVRDLF + KK AP
Sbjct: 190 KGVLLVGPPGTGKTLLARAVAGEANVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNAP 249
Query: 426 SIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLD 485
IIFIDEIDAV + R G +DEREQTLNQLL EMDGF++N VI++ ATNR DVLD
Sbjct: 250 CIIFIDEIDAVGRHR-GAGLGGGHDEREQTLNQLLVEMDGFEANDGVILVAATNRPDVLD 308
Query: 486 PALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLA 545
PAL RPGRFDR V+V PD GRE +L+VH K++PLA+D+DL +A T GF+GADLA
Sbjct: 309 PALLRPGRFDRRVVVGRPDVRGREEVLRVHA--KKVPLAEDVDLRVLARGTPGFSGADLA 366
Query: 546 NLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
N+VNE AL A R N+ VV DF A ++ + G E+K+ L EK V A
Sbjct: 367 NMVNEGALSAARANRKVVTMQDFESAKDKVLMGAERKSMLLTDEEKRVTA 416
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 322 bits (825), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 173/316 (54%), Positives = 223/316 (70%), Gaps = 10/316 (3%)
Query: 287 YVAVLAGLLHRFPVS----FSQTAGQVGHRKTRGPGGAK---VSEQGDTITFADVAGVDE 339
++A+L LL V F Q G + G G +K ++E + ITF DVAGVDE
Sbjct: 99 FLAILVQLLPILLVVGVWLFLMRQMQGGAKGAMGFGKSKARLLTENKNRITFEDVAGVDE 158
Query: 340 AKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSAS 399
AKEEL+E+V+FL+ P K+ RLG + P+G LLVG PGTGKTL+A+AVAGEA VPF + S S
Sbjct: 159 AKEELQEVVDFLKDPAKFQRLGGKIPKGALLVGPPGTGKTLIARAVAGEAGVPFFTISGS 218
Query: 400 EFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQL 459
+FVE++VG+GASRVRD+F +AKK AP IIFIDEIDAV + R G NDEREQTLNQL
Sbjct: 219 DFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHR-GAGLGGGNDEREQTLNQL 277
Query: 460 LTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKK 519
L EMDGF++N +I++ ATNR DVLDPAL RPGRFDR V+V PD GRE I++VH+ K
Sbjct: 278 LVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDVAGREKIIRVHM--K 335
Query: 520 ELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGI 579
+PLA D+D+ +A T GF+GADLANLVNEAAL+A R N+ +V DF A ++ + G
Sbjct: 336 NVPLAADVDVKTLARGTPGFSGADLANLVNEAALMAARKNRRMVTMQDFEQAKDKVMMGA 395
Query: 580 EKKTAKLKGSEKAVVA 595
E+++ + EK + A
Sbjct: 396 ERRSMAMNEEEKKLTA 411
>sp|Q9BAE0|FTSH_MEDSA ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Medicago
sativa GN=FTSH PE=2 SV=1
Length = 706
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/275 (62%), Positives = 203/275 (73%), Gaps = 5/275 (1%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
+V E G +TFADVAG D+AK EL+E+V+FL++PDKY LGA+ P+G LLVG PGTGKTL
Sbjct: 244 EVPETG--VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTL 301
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LA+AVAGEA PF SC+ASEFVEL+VG+GASRVRDLF +AK +AP I+FIDEIDAV + R
Sbjct: 302 LARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQR 361
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
G NDEREQT+NQLLTEMDGF NS VIVL ATNR DVLD AL RPGRFDR V V
Sbjct: 362 -GAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 420
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNK 560
+ PD GR IL+VH K LAKD+D IA T GFTG DL NL+NEAA+LA R +
Sbjct: 421 DRPDVAGRVKILQVHSRGKA--LAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDL 478
Query: 561 VVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
+ K + A+ER IAG EKK A + +K +VA
Sbjct: 479 KEISKDEIADALERIIAGPEKKNAVVSEEKKKLVA 513
>sp|O83746|FTSH_TREPA ATP-dependent zinc metalloprotease FtsH OS=Treponema pallidum
(strain Nichols) GN=ftsH PE=3 SV=1
Length = 609
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/286 (58%), Positives = 214/286 (74%), Gaps = 9/286 (3%)
Query: 310 GHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVL 369
GH ++ A V E T FADVAGVDEAKEEL E+V+FL+ P KY +G + PRGVL
Sbjct: 124 GHARS-----AAVEEGKVTTRFADVAGVDEAKEELMEVVDFLKFPKKYTEIGGKIPRGVL 178
Query: 370 LVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIF 429
LVG PGTGKTLLA+AVAGEA VPF S S+F+E++VG+GASRVRDLF +A+++AP IIF
Sbjct: 179 LVGPPGTGKTLLARAVAGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIF 238
Query: 430 IDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALR 489
IDE+DA+ KSR I SNDEREQTLNQLL EMDGFD+ + +I+L ATNR DVLDPAL
Sbjct: 239 IDELDAIGKSRLN--AIHSNDEREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALL 296
Query: 490 RPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVN 549
RPGRFDR V V+ PD GREAIL++H + + LA ++DL +A +T G++GADLAN+VN
Sbjct: 297 RPGRFDRQVCVDRPDLKGREAILRIHA--QNVKLAPEVDLKAVARITGGYSGADLANVVN 354
Query: 550 EAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
EAALLA R + V + D AVE+++ G++KK+ ++ E+ ++A
Sbjct: 355 EAALLAVRSGRAQVIETDLDEAVEKTMIGLQKKSRVIREEERRIIA 400
>sp|O82150|FTSH_TOBAC ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Nicotiana
tabacum GN=FTSH PE=2 SV=2
Length = 714
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/275 (62%), Positives = 203/275 (73%), Gaps = 5/275 (1%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
+V E G +TFADVAG D+AK EL+E+V+FL++PDKY LGA+ P+G LLVG PGTGKTL
Sbjct: 244 EVPETG--VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTL 301
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LA+AVAGEA VPF SC+ASEFVEL+VG+GASRVRDLF +AK +AP I+FIDEIDAV + R
Sbjct: 302 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQR 361
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
G NDEREQT+NQLLTEMDGF NS VIVL ATNR DVLD AL RPGRFDR V V
Sbjct: 362 -GAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 420
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNK 560
+ PD GR IL+VH K L KD+D IA T G+TGADL NL+NEAA+LA R
Sbjct: 421 DRPDVAGRIKILQVHSRGKA--LTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARREL 478
Query: 561 VVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
+ K + A+ER IAG EKK A + +K +VA
Sbjct: 479 KEISKDEISDALERIIAGPEKKNAVVSDEKKKLVA 513
>sp|Q7URM7|FTSH2_RHOBA ATP-dependent zinc metalloprotease FtsH 2 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH2 PE=3 SV=1
Length = 728
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/368 (50%), Positives = 236/368 (64%), Gaps = 26/368 (7%)
Query: 239 PTKRIVYTTTR--PSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGL-- 294
P + + + T R P+D+ + L Q + R FL + L + VL L
Sbjct: 159 PAEEVTFLTIRGYPNDLIAAELEDLLVQSGVKWDNDRPSRFLENHWPELLMIGVLVALGI 218
Query: 295 --LHRF-----PVSFSQTAGQVGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEI 347
L R P+SFS++ G++ SE TF DVAG++EA +E+ E+
Sbjct: 219 VMLKRMGGVGSPMSFSRSRGKL------------YSEDDLPTTFEDVAGIEEAVDEVREV 266
Query: 348 VEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVG 407
V+FL++ +KY LG R P+GVLLVG PGTGKTLLAKA+AGEA VPF S S S+FVE++VG
Sbjct: 267 VDFLKNSEKYQSLGGRIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSDFVEMFVG 326
Query: 408 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFD 467
+GA+RVRD+F +A AP IIFIDE+DA+ KSR G + +DEREQTLN LL EMDGFD
Sbjct: 327 VGAARVRDMFTQAVNRAPCIIFIDELDALGKSRSGSV-VGGHDEREQTLNALLVEMDGFD 385
Query: 468 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDI 527
SNS VIV+ ATNR + LDPAL RPGRFDR V+V+ PD GRE IL VHV K + L + +
Sbjct: 386 SNSGVIVVAATNRPETLDPALLRPGRFDRHVLVDRPDVAGREEILAVHV--KNVKLDETV 443
Query: 528 DLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLK 587
+L IAS+T+GF GADLANLVNEAALLA R K V +F AVER AG+EKK +
Sbjct: 444 ELKGIASITSGFVGADLANLVNEAALLAARNGKPAVAMEEFNEAVERVTAGLEKKNRVMN 503
Query: 588 GSEKAVVA 595
EK VA
Sbjct: 504 EDEKIRVA 511
>sp|A9EXK6|FTSH4_SORC5 ATP-dependent zinc metalloprotease FtsH 4 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH4 PE=3 SV=1
Length = 648
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 179/362 (49%), Positives = 238/362 (65%), Gaps = 10/362 (2%)
Query: 235 KSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGL 294
KS T TK++ T P + + +++N+V + + F A++ L L +
Sbjct: 73 KSGTKTKKV---TIGPDNADEITKTIVDNKVAVFFEKEDTSPFWPGAIMYLLPTVFLLVM 129
Query: 295 LHRFPVSFSQTAGQVGHRKTRGPGGAKV-SEQGDTITFADVAGVDEAKEELEEIVEFLRS 353
+ F Q G + G A++ SE + +TFADVAG+DEAK+ELEEI+ FL+
Sbjct: 130 FYLF---MRQLQAGGGKAMSFGKSRARLLSEAQNKVTFADVAGIDEAKDELEEIIAFLKD 186
Query: 354 PDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRV 413
P K+ +LG R P+GVL++G PGTGKTLLA+A+AGEA VPF S S S+FVE++VG+GASRV
Sbjct: 187 PKKFQKLGGRIPKGVLMMGPPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRV 246
Query: 414 RDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVI 473
RDLF + KK AP IIFIDEIDAV + R G +DEREQTLNQLL EMDGF+SN VI
Sbjct: 247 RDLFEQGKKHAPCIIFIDEIDAVGRHR-GAGLGGGHDEREQTLNQLLVEMDGFESNEGVI 305
Query: 474 VLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIA 533
++ ATNR DVLDPA+ RPGRFDR ++V PD GRE IL+VH K++PL D+D+ +A
Sbjct: 306 IVAATNRPDVLDPAILRPGRFDRRIVVNRPDVRGREGILRVHT--KKVPLGPDVDMEILA 363
Query: 534 SMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAV 593
T GF GAD+ NLVNEAALLA R +K VV +DF A ++ + G E+++ + EK
Sbjct: 364 RGTPGFVGADIENLVNEAALLAARQDKDVVSMVDFEMAKDKVLMGAERRSMVISDEEKRT 423
Query: 594 VA 595
A
Sbjct: 424 TA 425
>sp|Q9FH02|FTSH5_ARATH ATP-dependent zinc metalloprotease FTSH 5, chloroplastic
OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1
Length = 704
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 171/275 (62%), Positives = 202/275 (73%), Gaps = 5/275 (1%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
+V E G +TF DVAG D+AK EL+E+V+FL++PDKY LGA+ P+G LLVG PGTGKTL
Sbjct: 241 EVPETG--VTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTL 298
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LA+AVAGEA VPF SC+ASEFVEL+VG+GASRVRDLF +AK +AP I+FIDEIDAV + R
Sbjct: 299 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQR 358
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
G NDEREQT+NQLLTEMDGF NS VIVL ATNR DVLD AL RPGRFDR V V
Sbjct: 359 -GAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 417
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNK 560
+ PD GR ILKVH K + KD+D +A T GFTGADL NL+NEAA+LA R
Sbjct: 418 DRPDVAGRVQILKVHSRGKA--IGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARREL 475
Query: 561 VVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
+ K + A+ER IAG EKK A + +K +VA
Sbjct: 476 KEISKDEISDALERIIAGPEKKNAVVSEEKKRLVA 510
>sp|Q39102|FTSH1_ARATH ATP-dependent zinc metalloprotease FTSH 1, chloroplastic
OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2
Length = 716
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 171/275 (62%), Positives = 203/275 (73%), Gaps = 5/275 (1%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
+V E G ++FADVAG D+AK EL+E+V+FL++PDKY LGA+ P+G LLVG PGTGKTL
Sbjct: 253 EVPETG--VSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTL 310
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LA+AVAGEA VPF SC+ASEFVEL+VG+GASRVRDLF +AK +AP I+FIDEIDAV + R
Sbjct: 311 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQR 370
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
G NDEREQT+NQLLTEMDGF NS VIVL ATNR DVLD AL RPGRFDR V V
Sbjct: 371 -GAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 429
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNK 560
+ PD GR IL+VH K L KD+D +A T GFTGADL NL+NEAA+LA R
Sbjct: 430 DRPDVAGRVKILQVHSRGKA--LGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARREL 487
Query: 561 VVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
+ K + A+ER IAG EKK A + +K +VA
Sbjct: 488 KEISKDEISDALERIIAGPEKKNAVVSEEKKRLVA 522
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 318 bits (815), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 167/267 (62%), Positives = 200/267 (74%), Gaps = 3/267 (1%)
Query: 329 ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 388
+TFADVAG DEA +EL EI EFL +P K+ +LGAR P+G LLVG PGTGKTLLA+AVAGE
Sbjct: 186 VTFADVAGADEAVQELTEIKEFLENPQKFQKLGARIPKGALLVGPPGTGKTLLARAVAGE 245
Query: 389 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVS 448
A VPF S S S+FVE++VG+GASRVRDLF +AK+ +P IIF+DEIDAV + R G
Sbjct: 246 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQR-GAGLGGG 304
Query: 449 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGR 508
+DEREQTLNQLL EMDGFDS S +I+L ATNR D+LDPAL RPGRFDR ++V+ PD GR
Sbjct: 305 HDEREQTLNQLLVEMDGFDSKSGIIMLAATNRPDILDPALLRPGRFDRQIVVDRPDLPGR 364
Query: 509 EAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDF 568
ILKVH K PL +D+D+ IA T GFTGADLANLVNEAALLA R NK +E +
Sbjct: 365 IKILKVHTRGK--PLGEDVDIETIARGTPGFTGADLANLVNEAALLAARHNKEQIEMAEM 422
Query: 569 IHAVERSIAGIEKKTAKLKGSEKAVVA 595
A++R IAG E+KT + EK + A
Sbjct: 423 EEAIDRVIAGPERKTRLISEKEKEITA 449
>sp|Q39444|FTSH_CAPAN ATP-dependent zinc metalloprotease FTSH, chloroplastic (Fragment)
OS=Capsicum annuum GN=FTSH PE=2 SV=1
Length = 662
Score = 318 bits (814), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 172/275 (62%), Positives = 203/275 (73%), Gaps = 5/275 (1%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
+V E G +TFADVAG D+AK EL+E+V+FL++PDKY LGA+ P+G LLVG PGTGKTL
Sbjct: 221 EVPETG--VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTL 278
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LA+AVAGEA VPF SC+ASEFVEL+VG+GASRVR LF AK +AP I+FIDEIDAV + R
Sbjct: 279 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFIDEIDAVGRQR 338
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
G NDEREQT+NQLLTEMDGF NS VIVL ATNR DVLD AL RPG+FDR V V
Sbjct: 339 -GAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTV 397
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNK 560
+ PD GR IL+VH K LAKD+D IA T GFTGADL NL+NEAA+LA R +
Sbjct: 398 DRPDVAGRVRILQVHSRGKA--LAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDL 455
Query: 561 VVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
+ K + A+ER IAG EKK A + +K +VA
Sbjct: 456 KEISKDEISDALERIIAGPEKKNAVVSDEKKKLVA 490
>sp|Q0TTK8|FTSH_CLOP1 ATP-dependent zinc metalloprotease FtsH OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=ftsH PE=3
SV=1
Length = 717
Score = 318 bits (814), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 177/316 (56%), Positives = 222/316 (70%), Gaps = 15/316 (4%)
Query: 282 LIALFYVAVLAGLLHRFPVSFSQTAGQVGHR-KTRGPGGAKVSEQGDT-ITFADVAGVDE 339
LI +F+V + FS+ ++G + G AK+ + +T ITF DVAG DE
Sbjct: 123 LILIFFVGRMM---------FSKMNNKMGGGVMSFGKNNAKLYAENETGITFKDVAGQDE 173
Query: 340 AKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSAS 399
AKE L EIV+FL KY+ +GA+ P+G LLVG PGTGKTLLAKAVAGEA+VPF S S S
Sbjct: 174 AKESLVEIVDFLHDTRKYVEIGAKLPKGALLVGPPGTGKTLLAKAVAGEAKVPFFSMSGS 233
Query: 400 EFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQL 459
+FVE++VGMGA+RVRDLF +A+++AP I+FIDEIDA+ KSRDG I NDEREQTLNQL
Sbjct: 234 DFVEMFVGMGAARVRDLFKQAEEKAPCIVFIDEIDAIGKSRDG--AIQGNDEREQTLNQL 291
Query: 460 LTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKK 519
LTEMDGFDS+ V++L ATNR +VLD AL RPGRFDR ++V+ PD IGRE ILKVH +
Sbjct: 292 LTEMDGFDSSKGVVILAATNRPEVLDKALLRPGRFDRRIIVDRPDLIGREEILKVH--SR 349
Query: 520 ELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGI 579
++ L+ D+ L +IA T G GADLAN+VNEAAL A + + V + D AVE IAG
Sbjct: 350 DVKLSDDVSLEEIAKSTPGAVGADLANIVNEAALRAVKHGRKFVIQEDLDEAVEVIIAGQ 409
Query: 580 EKKTAKLKGSEKAVVA 595
EK+ L EK +VA
Sbjct: 410 EKRDRILSPKEKKIVA 425
>sp|Q5Z974|FTSH1_ORYSJ ATP-dependent zinc metalloprotease FTSH 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH1 PE=2 SV=1
Length = 686
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/275 (62%), Positives = 204/275 (74%), Gaps = 5/275 (1%)
Query: 321 KVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTL 380
+V E G +TF DVAG D+AK EL+E+V+FL++PDKY LGA+ P+G LLVG PGTGKTL
Sbjct: 223 EVPETG--VTFVDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTL 280
Query: 381 LAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR 440
LA+AVAGEA VPF SC+ASEFVEL+VG+GASRVRDLF +AK +AP I+FIDEIDAV + R
Sbjct: 281 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCIVFIDEIDAVGRQR 340
Query: 441 DGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMV 500
G NDEREQT+NQLLTEMDGF NS VIVL ATNR DVLD AL RPGRFDR V V
Sbjct: 341 -GAGLGGGNDEREQTINQLLTEMDGFAGNSGVIVLAATNRPDVLDAALLRPGRFDRQVTV 399
Query: 501 ETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNK 560
+ PD GR IL+VH K LAKD+D IA T GFTGADL NL+NEAA+LA R +
Sbjct: 400 DRPDVAGRVKILEVHSRGKA--LAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDL 457
Query: 561 VVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
+ K + A+ER IAG EKK A + ++ +VA
Sbjct: 458 KEISKDEISDALERIIAGPEKKNAVVSEEKRRLVA 492
>sp|Q8K9G8|FTSH_BUCAP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=ftsH PE=3 SV=1
Length = 613
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 189/417 (45%), Positives = 246/417 (58%), Gaps = 40/417 (9%)
Query: 183 VPYSDFLSKINSNQVAKVEVDGVHIMFKLKNDGSIQESEVITNKFQESESLLKSVTPTKR 242
V YS FLS++N +QV + ++G I SVT
Sbjct: 32 VDYSTFLSEVNQDQVREAYINGRII----------------------------SVTKKDS 63
Query: 243 IVYTTTRPSDIKTPYEKMLENQVEFGSPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSF 302
Y T P + + +L V+ L S I+ F + +L G+ F
Sbjct: 64 SKYITYIPINDPKLLDNLLTKNVKIVGEIPEEPSLLISIFISWFPMLLLIGVWIFFMRQM 123
Query: 303 SQTAGQ----VGHRKTRGPGGAKVSEQGDTITFADVAGVDEAKEELEEIVEFLRSPDKYI 358
G+ G K R +SE TFADVAG DEAKEE+ E+VE+L+ P ++
Sbjct: 124 QMGGGKGAMSFGKSKAR-----MLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQ 178
Query: 359 RLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFA 418
+LG + P+G+L+VG PGTGKTLLAKA+AGEA+VPF + S S+FVE++VG+GASRVRD+F
Sbjct: 179 KLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 419 RAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGAT 478
A+K AP IIFIDEIDAV + R G +DEREQTLNQ+L EMDGFD N VI++ AT
Sbjct: 239 HARKSAPCIIFIDEIDAVGRQR-GAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAAT 297
Query: 479 NRSDVLDPALRRPGRFDRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTG 538
NR DVLDPAL RPGRFDR V+V PD GR+ ILKVH+ K +PL++D+D IA T G
Sbjct: 298 NRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRK--VPLSEDVDPMIIARGTPG 355
Query: 539 FTGADLANLVNEAALLAGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
F+GADLANLVNEAAL A R N VV I F A ++ + G E+++ + +K A
Sbjct: 356 FSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQKESTA 412
>sp|B8G4Q6|FTSH_CHLAD ATP-dependent zinc metalloprotease FtsH OS=Chloroflexus aggregans
(strain MD-66 / DSM 9485) GN=ftsH PE=3 SV=1
Length = 656
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/269 (62%), Positives = 208/269 (77%), Gaps = 4/269 (1%)
Query: 328 TITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG 387
TITFADVAG +EAK++L EIVEFL+ PDK+ LGAR PRGVL+VG PGTGKTLL++AVAG
Sbjct: 165 TITFADVAGQEEAKQDLAEIVEFLKFPDKFAALGARIPRGVLMVGPPGTGKTLLSRAVAG 224
Query: 388 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIV 447
EA VPF S S SEFVE++VG+GASRVRDLF +AK+ AP I+FIDEIDAV + R G
Sbjct: 225 EAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFIDEIDAVGRQR-GAGLGG 283
Query: 448 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKIG 507
S+DEREQTLNQ+L EMDGFD+N+ VIV+ ATNR DVLDPAL RPGRFDR V+++ PD G
Sbjct: 284 SHDEREQTLNQILVEMDGFDTNTNVIVIAATNRPDVLDPALVRPGRFDRQVVLDAPDVRG 343
Query: 508 REAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKID 567
R ILKVHV K PLA+D++L +A T GF+GADL N+VNEAA+LA R +K + +
Sbjct: 344 RIEILKVHVKGK--PLAEDVNLEILARQTPGFSGADLMNVVNEAAILAARRSKRKISMAE 401
Query: 568 FIHAVER-SIAGIEKKTAKLKGSEKAVVA 595
F AVER +I G E+++ + +K VVA
Sbjct: 402 FQDAVERVAIGGPERRSRVMTDRQKLVVA 430
>sp|B3DV46|FTSH1_METI4 ATP-dependent zinc metalloprotease FtsH 1 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH1 PE=3 SV=1
Length = 636
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 202/449 (44%), Positives = 283/449 (63%), Gaps = 35/449 (7%)
Query: 149 LLLQLGIVMFVMRLLRPGIPLPGSEPRTSTTFVSVPYSDFLSKINSNQVAKVEVDGVHIM 208
LL+Q+GI +F++ + + E T ++PYS+FL+KIN ++ + ++ I
Sbjct: 25 LLVQVGIALFLVWIWQ--------ESLHKATVSTIPYSEFLNKINQKEIIECKITPDEIY 76
Query: 209 FKLKNDGSIQESEVITNKFQESESLLKSVTPTKRIVYTTTRPSDIKTPYEKMLENQVEFG 268
K+ + +K +E P K +++T R D +++ V +G
Sbjct: 77 GKM-----------LVSKPEEKGQ------PPKIALFSTVRVDDPDL-VKRLQSAGVVYG 118
Query: 269 SPDKRSGGFLNSALIALFYVAVLAGLLHRFPVSFSQTAGQVGHRKTR-GPGGAKV-SEQG 326
S L S ++ + V +L L F ++ G G+ G A++ ++
Sbjct: 119 SVKPS----LLSQILFSWVVPILIFFLVWFALARFMGGGGAGYSLLNIGKSRARLLVDES 174
Query: 327 DTITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLPGTGKTLLAKAVA 386
+TFADVAG DEAK EL+E+V+FL++P +Y LGA+ P+GVLLVG PGTGKTLLAKAVA
Sbjct: 175 TGVTFADVAGCDEAKYELQEVVDFLKNPSRYRALGAKIPKGVLLVGPPGTGKTLLAKAVA 234
Query: 387 GEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRI 446
GEA+VPF S S SEFVE++VG+GA+RVRDLF +AK +AP I+FIDE+DA+ + R R +
Sbjct: 235 GEAKVPFFSISGSEFVEMFVGVGAARVRDLFGQAKSKAPCIVFIDELDAIGRQRGVRIQ- 293
Query: 447 VSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDKI 506
V +DE EQTLNQLL EMDGFD N +IVL ATNR ++LD AL RPGRFDR V+V+ PD
Sbjct: 294 VGSDEHEQTLNQLLVEMDGFDPNEGIIVLAATNRPEILDRALLRPGRFDRQVVVDLPDAN 353
Query: 507 GREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALLAGRLNKVVVEKI 566
GREAIL+VH K PL+++ID +IA T GF+GADLANL+NEAALLA R +E++
Sbjct: 354 GREAILRVHARGK--PLSENIDFKEIAQATMGFSGADLANLLNEAALLAARRKSSRIEQV 411
Query: 567 DFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
D + A+E+ IAG E+K+ L E+ VA
Sbjct: 412 DLLEAMEKVIAGPERKSRVLSEKERERVA 440
>sp|O69076|FTSH_STRPN ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=ftsH PE=3
SV=3
Length = 652
Score = 316 bits (810), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/281 (60%), Positives = 203/281 (72%), Gaps = 4/281 (1%)
Query: 316 GPGGAKVSEQGDT-ITFADVAGVDEAKEELEEIVEFLRSPDKYIRLGARPPRGVLLVGLP 374
G AK + + D + F+DVAG +E K+EL E+VEFL+ P ++ +LGAR P GVLL G P
Sbjct: 170 GRSKAKAANKEDIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPP 229
Query: 375 GTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEID 434
GTGKTLLAKAVAGEA VPF S S S+FVE++VG+GASRVR LF AKK AP+IIFIDEID
Sbjct: 230 GTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEID 289
Query: 435 AVAKSRDGRFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRF 494
AV + R G NDEREQTLNQLL EMDGF+ N +IV+ ATNRSDVLDPAL RPGRF
Sbjct: 290 AVGRQR-GVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRF 348
Query: 495 DRVVMVETPDKIGREAILKVHVSKKELPLAKDIDLGDIASMTTGFTGADLANLVNEAALL 554
DR V+V PD GREAILKVH K PLA+D+DL +A T GF GADL N++NEAAL+
Sbjct: 349 DRKVLVGRPDVKGREAILKVHAKNK--PLAEDVDLKLVAQQTPGFVGADLENVLNEAALV 406
Query: 555 AGRLNKVVVEKIDFIHAVERSIAGIEKKTAKLKGSEKAVVA 595
A R NK +++ D A +R IAG KK + E+ +VA
Sbjct: 407 AARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVA 447
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 211,873,945
Number of Sequences: 539616
Number of extensions: 9030189
Number of successful extensions: 48079
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 925
Number of HSP's that attempted gapping in prelim test: 43438
Number of HSP's gapped (non-prelim): 3315
length of query: 597
length of database: 191,569,459
effective HSP length: 123
effective length of query: 474
effective length of database: 125,196,691
effective search space: 59343231534
effective search space used: 59343231534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)