Query 007597
Match_columns 596
No_of_seqs 186 out of 1137
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 05:45:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007597.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007597hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 2E-180 5E-185 1519.6 43.7 563 27-595 39-631 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 8E-168 3E-172 1423.7 49.4 574 17-595 1-581 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 2E-164 6E-169 1392.2 42.7 553 27-595 5-557 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 4E-161 1E-165 1364.7 44.4 544 27-595 4-547 (796)
5 3vue_A GBSS-I, granule-bound s 98.8 3.8E-08 1.3E-12 108.9 13.0 197 331-591 152-353 (536)
6 3nb0_A Glycogen [starch] synth 94.5 0.067 2.3E-06 61.1 8.3 108 440-593 250-361 (725)
7 3fro_A GLGA glycogen synthase; 55.4 25 0.00085 35.4 7.6 157 332-592 122-279 (439)
8 3u7q_B Nitrogenase molybdenum- 32.0 1.6E+02 0.0056 32.1 9.8 136 14-163 307-470 (523)
9 1uqt_A Alpha, alpha-trehalose- 31.7 41 0.0014 36.2 4.9 40 330-383 121-160 (482)
10 3emu_A Leucine rich repeat and 29.5 85 0.0029 28.2 6.0 37 332-372 88-127 (161)
11 3s4e_A Dual specificity protei 29.4 57 0.0019 28.5 4.7 37 332-372 82-121 (144)
12 3ezz_A Dual specificity protei 25.3 80 0.0027 27.4 4.9 39 331-373 81-122 (144)
13 3t5t_A Putative glycosyltransf 20.6 86 0.0029 34.2 4.8 53 332-405 149-203 (496)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=1.5e-180 Score=1519.65 Aligned_cols=563 Identities=47% Similarity=0.843 Sum_probs=544.1
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCcEEEEEechhccccchHHHhhc
Q 007597 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (596)
Q Consensus 27 ~~~~~ik~~i~~~l~~~~gk~~~~as~~~~Y~Ala~~vrd~l~~~W~~T~~~~~~~~~k~vyY~SmEfl~gr~l~nnl~n 106 (596)
+++++|+++|.+||++++|+++.+|++.++|+|+|.+|||+|+++|.+|++.+.+.+.|+||||||||||||+|.|||+|
T Consensus 39 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~W~~t~~~~~~~~~k~vyYlS~EFL~Gr~L~n~l~n 118 (879)
T 1ygp_A 39 NKAEDFQDRFIDHVETTLARSLYNCDDMVAYEAASMSIRDNLVIDWNKTQQKFTTRDPKRVYYLSLEFLMGRALDNALIN 118 (879)
T ss_dssp CSHHHHHHHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCCCCBCHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEEchhhhhhhHHHHHHHh
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHH-------------HHHHHHcCCChHHHHhhhccCCCCCCCchhchhhhHhhhhccCCCeEEEEeccCCcceEE
Q 007597 107 LDIQNAY-------------ADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQ 173 (596)
Q Consensus 107 Lg~~~~~-------------~~~l~~lg~~l~~l~~~E~d~~LgnGGLGrLAgd~ldSaA~LglP~~G~GL~Y~~GyF~Q 173 (596)
||+++++ ++||++||+++++|+++|+||||||||||||||||||||||||+|++||||||+||||+|
T Consensus 119 lg~~~~~~~~~~~~~~~~~~~~al~~lg~~l~~~~~~E~da~LGnGGLGrLAacfLdS~AtLglP~~GyGlrY~~G~F~Q 198 (879)
T 1ygp_A 119 MKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIPAWGYGLRYEYGIFAQ 198 (879)
T ss_dssp CCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEE
T ss_pred cCChhhhchhhccccchhHHHHHHHHcCCCHHHHHhcCCCCCcCCCcHHHHHHHHHHHHHhCCCCeEEEEeeecCCceEE
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCeeeeecccccccCCCcccccCCeEEEEEECCeEEE--CC-CCce--eeeCCeEEEEEEEeeccCCCCCCceEEEE
Q 007597 174 KITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV--NP-NGTR--KWVGGEVVQAVAYDIPIPGYKTKNTISLR 248 (596)
Q Consensus 174 ~I~dG~QvE~pd~Wl~~~~pwe~~r~~~~~~V~f~g~v~~--~~-~g~~--~~~~~~~v~a~~yd~pi~g~~~~~~~~lr 248 (596)
+|.||||+|.||+|+..|||||++|++.+++|+|+|+|+. +. +|+. +|++++.|+|||||+||+||+|+++|+||
T Consensus 199 ~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~v~av~yD~Pi~Gy~~~~~n~lR 278 (879)
T 1ygp_A 199 KIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTSNVNNLR 278 (879)
T ss_dssp EEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEEEEEEEEEEEEECSSCCCEEEEE
T ss_pred EeeCCeeEEeccchhccCCcccccCCCceEEEeeCCEEeeccccCCCcceeEeeCCcEEEEEEccccccCcCCCceEEEE
Confidence 9999999999999999999999999999999999999983 34 7865 49999999999999999999999999999
Q ss_pred EEecccCCccccccccCcchhhhHHhhhhhhccceeeecCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHhccCcccc
Q 007597 249 LWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWS 328 (596)
Q Consensus 249 LW~a~v~~~~~~l~~~~~~~y~~a~~~~~~~r~IT~~LYp~D~~~~GkelRLkQeyfl~~a~lqdiir~~~~~~g~~~l~ 328 (596)
||+++++ ..|+|+.||.|+|.+++++++.+|+||++|||+|++++||+|||+|||||||||+|||||+|++.++ +|+
T Consensus 279 LW~a~~~-~~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl~sa~lqdilr~~~~~~~--~l~ 355 (879)
T 1ygp_A 279 LWQARPT-TEFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRFKKSKR--PWT 355 (879)
T ss_dssp EEEEEES-CSCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CGG
T ss_pred EEEeccC-cccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchhhheehhhhhhhhHHHHHHHHHHHhCC--Chh
Confidence 9999955 4899999999999999999999999999999999999999999999999999999999999998874 799
Q ss_pred cCCCCeEEEeCCCchhhhHHHHHHHHHHhcCCCHHHHHHHhhhceeeeeccccccccccccHHHHHHhchhHHHHHHHHH
Q 007597 329 EFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEID 408 (596)
Q Consensus 329 ~l~~~~~ihlNdtHpalai~ElmR~l~de~gl~~~~A~~iv~~~~~fTnHTpvpeglE~wp~~l~~~~lpr~~~ii~~in 408 (596)
.|+++++|||||||||||||||||+|+|++|++|++||+||+++|+||||||||||||+||++||+++||||++||++||
T Consensus 356 ~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ein 435 (879)
T 1ygp_A 356 EFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDIN 435 (879)
T ss_dssp GHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHHH
T ss_pred hcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHHCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCChhhhcccccccCCCCCC--eeeeehhhhhcCCchHhHHHHhHHHHHHhhhcchhhhcCC-CCcccc
Q 007597 409 KRFIAMVRSTRSDLESKIPSMCILDNNPKKP--VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPN-KLQNKT 485 (596)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~--~~~Ma~LAl~~S~~vNGVS~lH~ev~k~~~f~~~~~l~P~-k~~niT 485 (596)
.+|++.++.++|.|.+++.+||||++ +++ +||||+||+++||+|||||+||++|+|+++|++|+++||+ ||+|||
T Consensus 436 ~~f~~~~~~~~~~d~~~~~~l~ii~~--~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f~df~~l~P~~kf~n~T 513 (879)
T 1ygp_A 436 WFFLEDVAKKFPKDVDLLSRISIIEE--NSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNVT 513 (879)
T ss_dssp HHHHHHHHHHSTTCTHHHHHHCSEEC--CSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTTTHHHHHHHCGGGEEECC
T ss_pred HHHHHHHHHHcCCCHHHHHhcceecc--CCCcceeehHHHHHHhcCceeEehHHHHHHHHHHHhHHHHHhCCCCcccCcC
Confidence 99999999999999999999999987 433 8999999999999999999999999999999999999999 999999
Q ss_pred cccCccccccccChhHHHHHHHhcC---CcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-CCcCC
Q 007597 486 NGITPRRWLRFCNPELSKIITKWLK---TDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVT-GVTID 561 (596)
Q Consensus 486 NGV~~rrWl~~~np~L~~Li~~~ig---~~~W~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~-g~~ld 561 (596)
||||+|||+.+|||+|++||+++|| + +|.+|+++|++|+++++|++|+++|+++|++||++|++||++++ |+.+|
T Consensus 514 NGVt~rrWl~~~Np~L~~Li~~~iG~~~~-~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld 592 (879)
T 1ygp_A 514 NGITPRRWLKQANPSLAKLISETLNDPTE-EYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDII 592 (879)
T ss_dssp CCBCHHHHTTTTCHHHHHHHHHHTTCTTC-GGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCS
T ss_pred CCcCCchhhhhcCHHHHHHHHHhcCCChh-hhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEec
Confidence 9999999999999999999999999 6 99999999999999999999999999999999999999999999 99999
Q ss_pred -----CCCccccceeccccccccccchhhHHHHHHHhhc
Q 007597 562 -----PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKV 595 (596)
Q Consensus 562 -----p~~lfd~~arR~heYKRq~Lnil~~i~ry~~ik~ 595 (596)
|++|||||||||||||||+||+|++++||++||+
T Consensus 593 ~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~ 631 (879)
T 1ygp_A 593 NREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKN 631 (879)
T ss_dssp CSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999985
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=8e-168 Score=1423.74 Aligned_cols=574 Identities=47% Similarity=0.815 Sum_probs=542.9
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCcEEEEEechhcc
Q 007597 17 KIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQ 96 (596)
Q Consensus 17 ~~~~~~~~~~~~~~~ik~~i~~~l~~~~gk~~~~as~~~~Y~Ala~~vrd~l~~~W~~T~~~~~~~~~k~vyY~SmEfl~ 96 (596)
||++++.....++++|+++|.+||++++|+++.+||+.++|+|||.+|||+++++|.+|++.+.+.+.|+||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~~~~~w~~t~~~~~~~~~k~vyYlS~Efl~ 80 (824)
T 2gj4_A 1 QISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYM 80 (824)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHTTCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCEEE
T ss_pred CcccccccccccHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEchhhcc
Confidence 57788765555778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHhhcCCcHHHHHHHHHHcCCChHHHHhhhccCCCCCCCchhchhhhHhhhhccCCCeEEEEeccCCcceEEEEe
Q 007597 97 GRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKIT 176 (596)
Q Consensus 97 gr~l~nnl~nLg~~~~~~~~l~~lg~~l~~l~~~E~d~~LgnGGLGrLAgd~ldSaA~LglP~~G~GL~Y~~GyF~Q~I~ 176 (596)
||+|.|||+|||+++++++||+++|+++++|+|+|+||||||||||||||||||||||||+|++||||||+||||+|+|+
T Consensus 81 gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~i~~~E~d~~LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~ 160 (824)
T 2gj4_A 81 GRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIC 160 (824)
T ss_dssp ECCHHHHHHHHTCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEE
T ss_pred hhhhHHHHHHCCCHHHHHHHHHHhCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeeEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeecccccccCCCcccccCCeEEEEEECCeEEECCCCceeeeCCeEEEEEEEeeccCCCCCCceEEEEEEecccCC
Q 007597 177 KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASA 256 (596)
Q Consensus 177 dG~QvE~pd~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g~~~~~~~~~v~a~~yd~pi~g~~~~~~~~lrLW~a~v~~ 256 (596)
||||+|.||+||+.+||||++|++.+++|+|+|+|+.+.+|. +|++++.|+|+|||+|||||+|++||+||||+++ ++
T Consensus 161 dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g~-~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~a~-~~ 238 (824)
T 2gj4_A 161 GGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAK-AP 238 (824)
T ss_dssp TTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSSE-EEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEE-CC
T ss_pred CCEEEEcCccccccCCcccccCCCceEEEEeCCEEEecCCCc-eecccceEEEeeccCCcCCCCCCceEEEEEEEee-cC
Confidence 999999999999999999999999999999999998767783 7999999999999999999999999999999999 77
Q ss_pred ccccccccCcchhhhHHhhhhhhccceeeecCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHhc-cC-----cccccC
Q 007597 257 EDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERK-SG-----RQWSEF 330 (596)
Q Consensus 257 ~~~~l~~~~~~~y~~a~~~~~~~r~IT~~LYp~D~~~~GkelRLkQeyfl~~a~lqdiir~~~~~~-g~-----~~l~~l 330 (596)
+.|||..||.|+|..++.++..+++||++|||+|++++||++||+|||||||||+|||||+|++.+ |. .+|+.|
T Consensus 239 ~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~~~~~~ 318 (824)
T 2gj4_A 239 NDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAF 318 (824)
T ss_dssp C----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGH
T ss_pred cccchhhccCccHHHHHhcccchhhcCcCCCCCCCccchHhHhhhhhhhhhhhHHHHHHHHHHHhccccccccccchhhc
Confidence 899999999999999999999999999999999999999999999999999999999999998754 21 368889
Q ss_pred CCCeEEEeCCCchhhhHHHHHHHHHHhcCCCHHHHHHHhhhceeeeeccccccccccccHHHHHHhchhHHHHHHHHHHH
Q 007597 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (596)
Q Consensus 331 ~~~~~ihlNdtHpalai~ElmR~l~de~gl~~~~A~~iv~~~~~fTnHTpvpeglE~wp~~l~~~~lpr~~~ii~~in~~ 410 (596)
+++++||||||||||++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||.+
T Consensus 319 ~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~ 398 (824)
T 2gj4_A 319 PDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQR 398 (824)
T ss_dssp HHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCChhhhcccccccCCCCCC-eeeeehhhhhcCCchHhHHHHhHHHHHHhhhcchhhhcCCCCcccccccC
Q 007597 411 FIAMVRSTRSDLESKIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGIT 489 (596)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~l~ii~~~~~~~-~~~Ma~LAl~~S~~vNGVS~lH~ev~k~~~f~~~~~l~P~k~~niTNGV~ 489 (596)
|++.++.++|.+.+.+.+|+++++ +.. +||||+|||++|++|||||++|++++|+.+|++|+++||++|+|||||||
T Consensus 399 f~~~~~~~~~~~~~~~~~~~~i~~--~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~ 476 (824)
T 2gj4_A 399 FLNRVAAAFPGDVDRLRRMSLVEE--GAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGIT 476 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEEC--SSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBC
T ss_pred HHHHHHHHcCCcHHHHHhhhhhhh--cCCCcccHHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcC
Confidence 999999999999999999999986 433 89999999999999999999999999999999999999999999999999
Q ss_pred ccccccccChhHHHHHHHhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCccccc
Q 007597 490 PRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQ 569 (596)
Q Consensus 490 ~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~ 569 (596)
+|||+.+|||+++++|++.||+ +|.+|++++++|.++.+|++|+++|.++|++||.+|+++|++++|+.+||+++||+|
T Consensus 477 ~rrWl~~~NP~l~~lI~~~ig~-~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~ 555 (824)
T 2gj4_A 477 PRRWLVLCNPGLAEIIAERIGE-EYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQ 555 (824)
T ss_dssp TCCCCCCTCHHHHHHHHHHHCS-GGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEE
T ss_pred hhhhcccCCHhHHHHHHHhcCc-hhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEee
Confidence 9999999999999999999997 999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccccccccchhhHHHHHHHhhc
Q 007597 570 VKRIHEYKRQLLNILGAIYRYKKLKV 595 (596)
Q Consensus 570 arR~heYKRq~Lnil~~i~ry~~ik~ 595 (596)
||||||||||+||+|++++||.+||+
T Consensus 556 vkRl~eYKRq~L~~l~~i~~~~~i~~ 581 (824)
T 2gj4_A 556 VKRIHEYKRQLLNCLHVITLYNRIKK 581 (824)
T ss_dssp ESCCCGGGTHHHHHHHHHHHHHHHHH
T ss_pred eecchhhcchhhHHHHHHHHHHHHHh
Confidence 99999999999998999999999875
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=1.8e-164 Score=1392.21 Aligned_cols=553 Identities=42% Similarity=0.730 Sum_probs=538.6
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCcEEEEEechhccccchHHHhhc
Q 007597 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (596)
Q Consensus 27 ~~~~~ik~~i~~~l~~~~gk~~~~as~~~~Y~Ala~~vrd~l~~~W~~T~~~~~~~~~k~vyY~SmEfl~gr~l~nnl~n 106 (596)
.++++|+++|.+||++++|+++.+||+.++|.|||.+|||+++++|.+|++ .+.|+||||||||||||+|.|||+|
T Consensus 5 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~~rd~l~~~w~~t~~----~~~k~v~Y~S~Efl~gr~L~n~l~n 80 (796)
T 1l5w_A 5 FNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPV----ANQRHVNYISMEFLIGRLTGNNLLN 80 (796)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSGGGCCHHHHHHHHHHHHHHHHHTSCCCCCC----SSCCEEEEECSCCCCCCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCChHhCCHHHHHHHHHHHHHHHHHHHHHHhcc----cCCceEEEEehHHhHHHHHHHHHHh
Confidence 478899999999999999999999999999999999999999999999986 5689999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCChHHHHhhhccCCCCCCCchhchhhhHhhhhccCCCeEEEEeccCCcceEEEEeCCeeeeeccc
Q 007597 107 LDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAED 186 (596)
Q Consensus 107 Lg~~~~~~~~l~~lg~~l~~l~~~E~d~~LgnGGLGrLAgd~ldSaA~LglP~~G~GL~Y~~GyF~Q~I~dG~QvE~pd~ 186 (596)
||+++++++||+++|+++++|+|+|+||+|||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+
T Consensus 81 lg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d~ 160 (796)
T 1l5w_A 81 LGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDD 160 (796)
T ss_dssp HTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCC
T ss_pred cCcHHHHHHHHHHcCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCceeEEecCCeeEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccCCeEEEEEECCeEEECCCCceeeeCCeEEEEEEEeeccCCCCCCceEEEEEEecccCCccccccccCc
Q 007597 187 WLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND 266 (596)
Q Consensus 187 Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g~~~~~~~~~v~a~~yd~pi~g~~~~~~~~lrLW~a~v~~~~~~l~~~~~ 266 (596)
|++.++|||+.|++.+++|+|+|+|+. + + +|++++.|+|+|||+||+||+|+++|+||||+++++. .|+|..||.
T Consensus 161 wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~a~~~~-~f~l~~fn~ 235 (796)
T 1l5w_A 161 WHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKFND 235 (796)
T ss_dssp CCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEEEEEEEECSSSCCEEEEEEEEEECSS-CCCHHHHHT
T ss_pred cccCCCcceeecCCcEEEEeeCCEEee--c-c-eecCCceEEEEEecccccCCCCCceEEEEEEEeccCc-ccChhhcCC
Confidence 999999999999999999999999973 2 4 7999999999999999999999999999999999555 799999999
Q ss_pred chhhhHHhhhhhhccceeeecCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHhccCcccccCCCCeEEEeCCCchhhh
Q 007597 267 GQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLA 346 (596)
Q Consensus 267 ~~y~~a~~~~~~~r~IT~~LYp~D~~~~GkelRLkQeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpala 346 (596)
|+|.+|+++++.+|+||++|||+|++++||++||+||||||+||+|+|+|+|++.+ .+++.|+++++||||||||||+
T Consensus 236 gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~--~~~~~l~~p~viHlNDtHpal~ 313 (796)
T 1l5w_A 236 GDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLAG--RKLHELADYEVIQLNDTHPTIA 313 (796)
T ss_dssp TCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCGGGHHHHEEEEEESSTTTTH
T ss_pred ccHhhhhhchHhHhhhhhcCcCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHcC--CChhhcCCccEEEecCCccHhH
Confidence 99999999999999999999999999999999999999999999999999999887 4788899999999999999999
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHhhhceeeeeccccccccccccHHHHHHhchhHHHHHHHHHHHHHHHHHhhCCCChhhh
Q 007597 347 IPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKI 426 (596)
Q Consensus 347 i~ElmR~l~de~gl~~~~A~~iv~~~~~fTnHTpvpeglE~wp~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~ 426 (596)
+|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||.+|++.+..++|.|.+.+
T Consensus 314 i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~~ 393 (796)
T 1l5w_A 314 IPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVW 393 (796)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCeeeeehhhhhcCCchHhHHHHhHHHHHHhhhcchhhhcCCCCcccccccCccccccccChhHHHHHH
Q 007597 427 PSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIIT 506 (596)
Q Consensus 427 ~~l~ii~~~~~~~~~~Ma~LAl~~S~~vNGVS~lH~ev~k~~~f~~~~~l~P~k~~niTNGV~~rrWl~~~np~L~~Li~ 506 (596)
.+++++++ + .||||+|||++||+|||||++|++++|+.+|++|+++||++|+|||||||+|||+.+|||+++++|+
T Consensus 394 ~~~~i~~~--~--~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~ 469 (796)
T 1l5w_A 394 AKLAVVHD--K--QVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLD 469 (796)
T ss_dssp HHHCSEET--T--EEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHH
T ss_pred hhhhcccC--C--cccHHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHH
Confidence 99999876 5 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCccccceeccccccccccchhhH
Q 007597 507 KWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGA 586 (596)
Q Consensus 507 ~~ig~~~W~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arR~heYKRq~Lnil~~ 586 (596)
+.+|+ +|.+|++.|++|+++++|++|+++|.++|++||++|++||++++|+.+||+++||||||||||||||+||+|++
T Consensus 470 ~~~g~-~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~i 548 (796)
T 1l5w_A 470 KSLQK-EWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHI 548 (796)
T ss_dssp HHCSS-CCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHH
T ss_pred HhcCc-ccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHH
Confidence 99996 99999999999999999999999977899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc
Q 007597 587 IYRYKKLKV 595 (596)
Q Consensus 587 i~ry~~ik~ 595 (596)
++||.+||+
T Consensus 549 i~~~~~i~~ 557 (796)
T 1l5w_A 549 LALYKEIRE 557 (796)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999999985
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=4.2e-161 Score=1364.74 Aligned_cols=544 Identities=44% Similarity=0.726 Sum_probs=527.2
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCcEEEEEechhccccchHHHhhc
Q 007597 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (596)
Q Consensus 27 ~~~~~ik~~i~~~l~~~~gk~~~~as~~~~Y~Ala~~vrd~l~~~W~~T~~~~~~~~~k~vyY~SmEfl~gr~l~nnl~n 106 (596)
.++++|+++|.+||++++|+++.+||+.++|.|||.+|||+++++|.+|++.+.+. |+||||||||||||+|.|||+|
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~--k~v~Y~S~Efl~gr~L~n~l~n 81 (796)
T 2c4m_A 4 EKQPLPAALVGSHVRAAAGTPADLATDRKFWTGLSRAVQERIADDWERTREAYGAA--RQQHYFSAEFLMGRALLNNLTN 81 (796)
T ss_dssp --CCSCHHHHHHHHHHHHSSCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--CEEEEECSCCCCBCSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCChHHCCHHHHHHHHHHHHHHHHHHHHHHhhhhhccC--CeEEEEehhhcchhhhhhHHHh
Confidence 35568999999999999999999999999999999999999999999999987754 9999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCChHHHHhhhccCCCCCCCchhchhhhHhhhhccCCCeEEEEeccCCcceEEEEeCCeeeeeccc
Q 007597 107 LDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAED 186 (596)
Q Consensus 107 Lg~~~~~~~~l~~lg~~l~~l~~~E~d~~LgnGGLGrLAgd~ldSaA~LglP~~G~GL~Y~~GyF~Q~I~dG~QvE~pd~ 186 (596)
||+++++++||+++|+++++|+++|+||+|||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+
T Consensus 82 lg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~ 161 (796)
T 2c4m_A 82 LGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDP 161 (796)
T ss_dssp TTCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCC
T ss_pred cccHHHHHHHHHHcCCCHHHHHhhccccccCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccCCeEEEEEECCeEEECCCCceeeeCCeEEEEEEEeeccCCCCCCceEEEEEEecccCCccccccccCc
Q 007597 187 WLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND 266 (596)
Q Consensus 187 Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g~~~~~~~~~v~a~~yd~pi~g~~~~~~~~lrLW~a~v~~~~~~l~~~~~ 266 (596)
|++.|+|||++|++.+++|+|+|+ .|.|+|||+|||||+|+++|+||||+++ +...|+|..||.
T Consensus 162 wl~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~yd~pi~gy~~~~~n~lrlW~a~-~~~~f~l~~fn~ 225 (796)
T 2c4m_A 162 WREEEYPFTIRRASDQLVVCFDDM---------------KTRAIPYDMPITGYGTHNVGTLRLWKAE-PWEEFDYDAFNA 225 (796)
T ss_dssp SSSSCCTTSEECGGGCEEEEETTE---------------EEEEEEEEEEECCTTCCCCEEEEEEEEE-ESSSSCHHHHHT
T ss_pred cccCCCceeEecCCcEEEEEeCCE---------------EEEEEEEeccccCcCCCceEEEEEEecc-cccccchhhccC
Confidence 999999999999999999999994 5789999999999999999999999999 445899999999
Q ss_pred chhhhHHhhhhhhccceeeecCCCCchhhhhhhhhhhhhhhhhhHHHHHHHHHHhccCcccccCCCCeEEEeCCCchhhh
Q 007597 267 GQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLA 346 (596)
Q Consensus 267 ~~y~~a~~~~~~~r~IT~~LYp~D~~~~GkelRLkQeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpala 346 (596)
|+|.+|+++++.+|+||++|||+|++++||++||+||||||+||+|+|+|+|++.+| +|+.|+++++||||||||||+
T Consensus 226 gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~--~l~~l~~p~viHlNDtHpal~ 303 (796)
T 2c4m_A 226 QRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHHK--DLSNFAEFHSVQLNDTHPVLA 303 (796)
T ss_dssp TCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--CSTTHHHHEEEEEESSTTTTH
T ss_pred cchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHHHHHHHHHHHhCC--ChhhcCCCeEEEeCCChHHhH
Confidence 999999999999999999999999999999999999999999999999999998874 688999999999999999999
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHhhhceeeeeccccccccccccHHHHHHhchhHHHHHHHHHHHHHHHHHhhCCCChhhh
Q 007597 347 IPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKI 426 (596)
Q Consensus 347 i~ElmR~l~de~gl~~~~A~~iv~~~~~fTnHTpvpeglE~wp~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~ 426 (596)
+|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||.+|+..+..+ |.+.+++
T Consensus 304 i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~-~~~~~~~ 382 (796)
T 2c4m_A 304 IPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAAD-GLDEETI 382 (796)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TCCHHHH
T ss_pred HHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHHHHHHHhc-CCcHhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cccccccCCCCCCeeeeehhhhhcCCchHhHHHHhHHHHHHhhhcchhhhcCCCCcccccccCccccccccChhHHHHHH
Q 007597 427 PSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIIT 506 (596)
Q Consensus 427 ~~l~ii~~~~~~~~~~Ma~LAl~~S~~vNGVS~lH~ev~k~~~f~~~~~l~P~k~~niTNGV~~rrWl~~~np~L~~Li~ 506 (596)
.+++++.+ + +||||+|||++||+|||||++|++++|+.+|++|+++||++|+|||||||+|||+.+|||+++++|+
T Consensus 383 ~~~~i~~~--~--~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~ 458 (796)
T 2c4m_A 383 NRMAPIQH--G--TVHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLT 458 (796)
T ss_dssp HHHCSEET--T--EEEHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHH
T ss_pred hcccceeC--C--cccHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHH
Confidence 99999876 5 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCccccceeccccccccccchhhH
Q 007597 507 KWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGA 586 (596)
Q Consensus 507 ~~ig~~~W~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arR~heYKRq~Lnil~~ 586 (596)
+.+|+++|.+|+++|++|+++++|++|+++|.++|++||++|++||++++|+.+||+++||||||||||||||+||+|++
T Consensus 459 ~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~i 538 (796)
T 2c4m_A 459 RLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYV 538 (796)
T ss_dssp HHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHH
T ss_pred HhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHH
Confidence 99993389999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc
Q 007597 587 IYRYKKLKV 595 (596)
Q Consensus 587 i~ry~~ik~ 595 (596)
++||.+||+
T Consensus 539 i~~~~~i~~ 547 (796)
T 2c4m_A 539 LDLYFRIKE 547 (796)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 999999986
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=98.75 E-value=3.8e-08 Score=108.88 Aligned_cols=197 Identities=17% Similarity=0.178 Sum_probs=119.6
Q ss_pred CCCeEEEeCCCchhhhHHHHHHHHHHhcCCCHHHHHHHhhhceeeeeccccccccccccHHHHHHhc-hhHHHHHHHHHH
Q 007597 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLL-PRHMEIIEEIDK 409 (596)
Q Consensus 331 ~~~~~ihlNdtHpalai~ElmR~l~de~gl~~~~A~~iv~~~~~fTnHTpvpeglE~wp~~l~~~~l-pr~~~ii~~in~ 409 (596)
..++++|+||-|.+++.+-+ +......+. ...-.++||.|++...|+ ||.+.+.... |..
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l-~~~~~~~~~-------~~~~~~V~TiHnl~~qg~--~~~~~~~~~~~~~~--------- 212 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYL-KNNYQPNGI-------YRNAKVAFCIHNISYQGR--FAFEDYPELNLSER--------- 212 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHH-HHHTTTTTS-------STTCEEEEEESCTTCCCE--EEGGGGGGGCCCGG---------
T ss_pred CCCEEEEECcchHHHHHHHH-HHhhhhhhh-------hcccceeeeecCcccccc--cchhhhhhcCCchh---------
Confidence 45678999999999987744 433211111 013469999999987775 3333332221 110
Q ss_pred HHHHHHHhhCCCChhhhcccccccCCCCCCeeeeehhhhhcCCchHhHHHHhHHHHHHhhhcchh----hhcCCCCcccc
Q 007597 410 RFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYV----SLWPNKLQNKT 485 (596)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~~~Ma~LAl~~S~~vNGVS~lH~ev~k~~~f~~~~----~l~P~k~~niT 485 (596)
+... .+.+..+.... ....++|-..++..|..|+.||.-+.+=+.+. |.... ..-+.++..|.
T Consensus 213 -~~~~--------~~~~~~~~~~~---~~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~ 279 (536)
T 3vue_A 213 -FRSS--------FDFIDGYDTPV---EGRKINWMKAGILEADRVLTVSPYYAEELISG-IARGCELDNIMRLTGITGIV 279 (536)
T ss_dssp -GHHH--------HEEEETTTSTT---CEEEEEHHHHHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECC
T ss_pred -hcch--------hhhhhcccccc---cccchhHHHHHHHhccEEEEcCHHHhhhhhcc-cccccccccccccCCeEEEE
Confidence 0000 00011111000 01178999999999999999998877633322 21000 11245799999
Q ss_pred cccCccccccccChhHHHHHHHhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCc
Q 007597 486 NGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSL 565 (596)
Q Consensus 486 NGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~l 565 (596)
|||....| ||.-. ..+.. .+..... . +.|..+|..| +++.|...||+..
T Consensus 280 NGiD~~~~----~p~~d----~~~~~--------------~~~~~~~----~-~~K~~~k~~l----~~~~gl~~d~~~p 328 (536)
T 3vue_A 280 NGMDVSEW----DPSKD----KYITA--------------KYDATTA----I-EAKALNKEAL----QAEAGLPVDRKIP 328 (536)
T ss_dssp CCCCTTTS----CTTTC----SSSSC--------------CCCTTTH----H-HHHHHHHHHH----HHHTTSCCCTTSC
T ss_pred CCcchhhc----CCCCc----ccccc--------------ccchhhh----h-hhhHHHHHHH----HHhcCCCCCCCCc
Confidence 99999999 46421 11110 1111111 2 4677888766 4567999999999
Q ss_pred cccceeccccccccccchhhHHHHHH
Q 007597 566 FDIQVKRIHEYKRQLLNILGAIYRYK 591 (596)
Q Consensus 566 fd~~arR~heYKRq~Lnil~~i~ry~ 591 (596)
+++++-|+.+.|...+ ++..+.++.
T Consensus 329 ~i~~vgRl~~~Kg~~~-li~a~~~l~ 353 (536)
T 3vue_A 329 LIAFIGRLEEQKGPDV-MAAAIPELM 353 (536)
T ss_dssp EEEEECCBSGGGCHHH-HHHHHHHHT
T ss_pred EEEEEeeccccCChHH-HHHHHHHhH
Confidence 9999999999999998 888777653
No 6
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=94.54 E-value=0.067 Score=61.07 Aligned_cols=108 Identities=15% Similarity=0.187 Sum_probs=79.5
Q ss_pred eeeeehhhhhcCCchHhHHHHhHHHHHHhhhcchhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCcccccCcc
Q 007597 440 VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLD 519 (596)
Q Consensus 440 ~~~Ma~LAl~~S~~vNGVS~lH~ev~k~~~f~~~~~l~P~k~~niTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~ 519 (596)
.++|=..++..+..++.||....+=++. +...-|.++ |-|||....|- |.
T Consensus 250 ~~~~EKaga~~AD~ITTVS~~yA~Ei~~-----Ll~r~~d~i--IpNGID~~~f~----p~------------------- 299 (725)
T 3nb0_A 250 RYCIERAAAHSADVFTTVSQITAFEAEH-----LLKRKPDGI--LPNGLNVIKFQ----AF------------------- 299 (725)
T ss_dssp HHHHHHHHHHHSSEEEESSHHHHHHHHH-----HTSSCCSEE--CCCCBCCCCCS----ST-------------------
T ss_pred HHHHHHHHHHhCCEEEECCHHHHHHHHH-----HhcCCCCEE--EcCCccccccC----cc-------------------
Confidence 5777777899999999998777664443 222234445 99999998883 42
Q ss_pred hHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcCCCC-Cccccceeccc-cccccccchhhHHHHHHHh
Q 007597 520 LLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTG--VTIDPN-SLFDIQVKRIH-EYKRQLLNILGAIYRYKKL 593 (596)
Q Consensus 520 ~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g--~~ldp~-~lfd~~arR~h-eYKRq~Lnil~~i~ry~~i 593 (596)
.+ +.+.|.++|.+|.++++...+ ..++++ .+....+-|+. +-|=-.| ++..+.++++.
T Consensus 300 -----------~~----~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl-~ieAl~~L~~~ 361 (725)
T 3nb0_A 300 -----------HE----FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADM-FIEALARLNYR 361 (725)
T ss_dssp -----------TH----HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHH-HHHHHHHHHHH
T ss_pred -----------hh----hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHH-HHHHHHHHHHH
Confidence 22 336789999999999988765 467744 56666689998 6788888 88888888764
No 7
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=55.36 E-value=25 Score=35.45 Aligned_cols=157 Identities=15% Similarity=0.101 Sum_probs=93.1
Q ss_pred CCeEEEeCCCchhhhHHHHHHHHHHhcCCCHHHHHHHhhhceeeeeccccccccccccHHHHHHhchhHHHHHHHHHHHH
Q 007597 332 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRF 411 (596)
Q Consensus 332 ~~~~ihlNdtHpalai~ElmR~l~de~gl~~~~A~~iv~~~~~fTnHTpvpeglE~wp~~l~~~~lpr~~~ii~~in~~~ 411 (596)
++.+||.++.+++++..- ++.+ ....+++|.|.+.+..... ..+..-
T Consensus 122 ~~Dii~~~~~~~~~~~~~-~~~~--------------~~~~~v~~~h~~~~~~~~~---~~~~~~--------------- 168 (439)
T 3fro_A 122 LPDVVHFHDWHTVFAGAL-IKKY--------------FKIPAVFTIHRLNKSKLPA---FYFHEA--------------- 168 (439)
T ss_dssp CCSEEEEESGGGHHHHHH-HHHH--------------HCCCEEEEESCCCCCCEEH---HHHHHT---------------
T ss_pred CCeEEEecchhhhhhHHH-Hhhc--------------cCCCEEEEecccccccCch---HHhCcc---------------
Confidence 677999998877665443 3221 2455899999998665432 222110
Q ss_pred HHHHHhhCCCChhhhcccccccCCCCCCeeeeehhhhhcCCchHhHHHHhHHHHHHhhhcchhhhcCCCCcccccccCcc
Q 007597 412 IAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPR 491 (596)
Q Consensus 412 ~~~~~~~~~~~~~~~~~l~ii~~~~~~~~~~Ma~LAl~~S~~vNGVS~lH~ev~k~~~f~~~~~l~P~k~~niTNGV~~r 491 (596)
. +.++... . ...+...++..+..+..||.-..+... .++...+.++.-|-|||...
T Consensus 169 --------~-----~~~~~~~----~--~~~~~~~~~~~ad~ii~~S~~~~~~~~-----~~~~~~~~~i~vi~ngvd~~ 224 (439)
T 3fro_A 169 --------G-----LSELAPY----P--DIDPEHTGGYIADIVTTVSRGYLIDEW-----GFFRNFEGKITYVFNGIDCS 224 (439)
T ss_dssp --------T-----CGGGCCS----S--EECHHHHHHHHCSEEEESCHHHHHHTH-----HHHGGGTTSEEECCCCCCTT
T ss_pred --------c-----ccccccc----c--eeeHhhhhhhhccEEEecCHHHHHHHh-----hhhhhcCCceeecCCCCCch
Confidence 0 0000000 1 345666677777788888765555422 13345678899999999998
Q ss_pred ccccccChhHHHHHHHhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCcccccee
Q 007597 492 RWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVK 571 (596)
Q Consensus 492 rWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~ar 571 (596)
.|- |.. +. +... +.+. .++++.| ++++ .+.+++-
T Consensus 225 ~~~----~~~-------~~------------------~~~~------~~~~--------~~~~~~~--~~~~-~~i~~~G 258 (439)
T 3fro_A 225 FWN----ESY-------LT------------------GSRD------ERKK--------SLLSKFG--MDEG-VTFMFIG 258 (439)
T ss_dssp TSC----GGG-------SC------------------SCHH------HHHH--------HHHHHHT--CCSC-EEEEEEC
T ss_pred hcC----ccc-------cc------------------chhh------hhHH--------HHHHHcC--CCCC-cEEEEEc
Confidence 885 321 10 0111 1111 1233445 3566 8999999
Q ss_pred ccc-cccccccchhhHHHHHHH
Q 007597 572 RIH-EYKRQLLNILGAIYRYKK 592 (596)
Q Consensus 572 R~h-eYKRq~Lnil~~i~ry~~ 592 (596)
|+. .+|...+ ++..+.++.+
T Consensus 259 ~~~~~~Kg~~~-li~a~~~l~~ 279 (439)
T 3fro_A 259 RFDRGQKGVDV-LLKAIEILSS 279 (439)
T ss_dssp CSSCTTBCHHH-HHHHHHHHHT
T ss_pred ccccccccHHH-HHHHHHHHHh
Confidence 999 9999988 8877776643
No 8
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=32.01 E-value=1.6e+02 Score=32.07 Aligned_cols=136 Identities=13% Similarity=0.028 Sum_probs=78.5
Q ss_pred hhcccccccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCcEEEEEech
Q 007597 14 KLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSME 93 (596)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~ik~~i~~~l~~~~gk~~~~as~~~~Y~Ala~~vrd~l~~~W~~T~~~~~~~~~k~vyY~SmE 93 (596)
++-.||.-..+.++..+.. +.+.+.|...+|+++++ . + ..-|.++.+.-.++.... ..|+|..+. +
T Consensus 307 ~~~GiP~i~~~~PiG~~~T-~~~l~~la~~~g~~~~~-----~---i-~~er~r~~~~l~d~~~~l---~GKrvaI~g-d 372 (523)
T 3u7q_B 307 GTWKHEVPKLNIPMGLDWT-DEFLMKVSEISGQPIPA-----S---L-TKERGRLVDMMTDSHTWL---HGKRFALWG-D 372 (523)
T ss_dssp HTSCCCCCCCCCSCHHHHH-HHHHHHHHHHHCCCCCH-----H---H-HHHHHHHHHHHHHHHHHH---TTCEEEEEC-S
T ss_pred HHhCCCeeecCCcCCHHHH-HHHHHHHHHHHCCChhH-----H---H-HHHHHHHHHHHHHHHHhc---CCCEEEEEC-C
Confidence 3346776554445544433 33666666777876521 1 1 112233333333333332 368888874 2
Q ss_pred hccccchHHHhhcCCcH--------------HHHHHHHHHc----------CCChHHHHh----hhccCCCCCCCchhch
Q 007597 94 FLQGRTLTNAIGSLDIQ--------------NAYADALNNL----------GHVLEEIAE----QEKDAALGNGGLGRLA 145 (596)
Q Consensus 94 fl~gr~l~nnl~nLg~~--------------~~~~~~l~~l----------g~~l~~l~~----~E~d~~LgnGGLGrLA 145 (596)
=..-..|..-|..||+. +.+++.|+++ |-|+.++++ ..+|+-+|++-=-.+|
T Consensus 373 ~~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~D~~~l~~~i~~~~pDLlig~s~~k~~a 452 (523)
T 3u7q_B 373 PDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKDLWHLRSLVFTDKPDFMIGNSYGKFIQ 452 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCCHHHHHHHHHHTCCSEEEECTTHHHHH
T ss_pred chHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEECCCHHHHHHHHHhcCCCEEEECccHHHHH
Confidence 22222444555567753 3455667652 346666654 5799999988555677
Q ss_pred hhhHhhhhccCCCeEEEE
Q 007597 146 SCFLDSMATLNLPAWGYG 163 (596)
Q Consensus 146 gd~ldSaA~LglP~~G~G 163 (596)
-+.+-++..+|+|++-+|
T Consensus 453 ~~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 453 RDTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp HHHHHHCGGGCCCEEECS
T ss_pred HHhhcccccCCCceEEec
Confidence 777788999999998777
No 9
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=31.71 E-value=41 Score=36.24 Aligned_cols=40 Identities=15% Similarity=0.252 Sum_probs=28.3
Q ss_pred CCCCeEEEeCCCchhhhHHHHHHHHHHhcCCCHHHHHHHhhhceeeeecccccc
Q 007597 330 FPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPE 383 (596)
Q Consensus 330 l~~~~~ihlNdtHpalai~ElmR~l~de~gl~~~~A~~iv~~~~~fTnHTpvpe 383 (596)
+.+..+||++|-|+ +.++.++|.+. ....++||.|||.|.
T Consensus 121 ~~~~DiV~vHdyhl-~~l~~~lr~~~-------------~~~~i~~~~H~pfp~ 160 (482)
T 1uqt_A 121 LQDDDIIWIHDYHL-LPFAHELRKRG-------------VNNRIGFFLHIPFPT 160 (482)
T ss_dssp CCTTCEEEEESGGG-TTHHHHHHHTT-------------CCSCEEEECCSCCCC
T ss_pred cCCCCEEEEECchH-HHHHHHHHHhC-------------CCCcEEEEEcCCCCC
Confidence 34568999999997 45566777542 134589999998663
No 10
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=29.46 E-value=85 Score=28.22 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=31.2
Q ss_pred CCeEEEeCCCc---hhhhHHHHHHHHHHhcCCCHHHHHHHhhhc
Q 007597 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (596)
Q Consensus 332 ~~~~ihlNdtH---palai~ElmR~l~de~gl~~~~A~~iv~~~ 372 (596)
.++.||+.-|. +++++.-||+ .+|+++++|++.+++.
T Consensus 88 ~~VlVHC~~G~sRS~~vv~ayLm~----~~~~s~~~A~~~v~~~ 127 (161)
T 3emu_A 88 EGVLIISGTGVNKAPAIVIAFLMY----YQRLSFINAFNKVQGL 127 (161)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHH----HTTCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCcHHHHHHHHHHHH----HhCCCHHHHHHHHHHH
Confidence 56899999998 7788777775 5799999999998874
No 11
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=29.45 E-value=57 Score=28.50 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=30.7
Q ss_pred CCeEEEeCCCc---hhhhHHHHHHHHHHhcCCCHHHHHHHhhhc
Q 007597 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (596)
Q Consensus 332 ~~~~ihlNdtH---palai~ElmR~l~de~gl~~~~A~~iv~~~ 372 (596)
.++.||+.-|. +++++.-||+ .+|+++++|++.+++.
T Consensus 82 ~~VlVHC~~G~sRS~~~v~ayLm~----~~~~~~~~A~~~v~~~ 121 (144)
T 3s4e_A 82 GVVLVHSNAGVSRAAAIVIGFLMN----SEQTSFTSAFSLVKNA 121 (144)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHHH----HHCCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 57899999998 6777777765 5699999999998874
No 12
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=25.32 E-value=80 Score=27.38 Aligned_cols=39 Identities=18% Similarity=0.292 Sum_probs=30.7
Q ss_pred CCCeEEEeCCCc---hhhhHHHHHHHHHHhcCCCHHHHHHHhhhce
Q 007597 331 PSKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRTV 373 (596)
Q Consensus 331 ~~~~~ihlNdtH---palai~ElmR~l~de~gl~~~~A~~iv~~~~ 373 (596)
+.++.||+.-|. +++++.-||+ ..|+++++|++.+++.-
T Consensus 81 ~~~VlVHC~~G~~RS~~~~~aylm~----~~~~~~~~A~~~v~~~R 122 (144)
T 3ezz_A 81 RGRVLVHSQAGISRSATICLAYLMM----KKRVRLEEAFEFVKQRR 122 (144)
T ss_dssp TCCEEEEESSSSSHHHHHHHHHHHH----HHTCCHHHHHHHHHTTC
T ss_pred CCeEEEECCCCCChhHHHHHHHHHH----HcCCCHHHHHHHHHHHC
Confidence 357899999998 5666666654 57999999999998743
No 13
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=20.56 E-value=86 Score=34.19 Aligned_cols=53 Identities=19% Similarity=0.334 Sum_probs=37.0
Q ss_pred CCeEEEeCCCchhhhHHHHHHHHHHhcCCCHHHHHHHhhhceeeeeccccccccccccHHHHHHhchhH--HHHHH
Q 007597 332 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRH--MEIIE 405 (596)
Q Consensus 332 ~~~~ihlNdtHpalai~ElmR~l~de~gl~~~~A~~iv~~~~~fTnHTpvpeglE~wp~~l~~~~lpr~--~~ii~ 405 (596)
+..+|-++|-|+.+ +|.++|.+.. ...+.|.-|||- |..-+-+.||.| -+|+.
T Consensus 149 ~~D~VwVhDYhL~l-lp~~lR~~~~-------------~~~igfFlHiPf-------Ps~e~f~~Lp~~~r~ell~ 203 (496)
T 3t5t_A 149 ADPVYLVHDYQLVG-VPALLREQRP-------------DAPILLFVHIPW-------PSADYWRILPKEIRTGILH 203 (496)
T ss_dssp SSCEEEEESGGGTT-HHHHHHHHCT-------------TSCEEEECCSCC-------CCHHHHTTSCHHHHHHHHH
T ss_pred CCCEEEEeCccHhH-HHHHHHhhCC-------------CCeEEEEEcCCC-------CCHHHHhhCcHhHHHHHHH
Confidence 45688899999754 5678887642 568999999994 444555567754 44544
Done!