BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007599
(596 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359497260|ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like,
partial [Vitis vinifera]
Length = 555
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/568 (69%), Positives = 461/568 (81%), Gaps = 29/568 (5%)
Query: 44 KDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDF 103
K+D ++ +LFNRDP PP+LF+VQPRL+P T LQAKL+EA+ LANSLEEQRDGY+DT+
Sbjct: 2 KEDPYNDASLFNRDPKSPPKLFVVQPRLRPDTLLQAKLDEAINLANSLEEQRDGYYDTEL 61
Query: 104 FDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGI 163
+K LPPHVVVQNP+++S K R+DT+FGPGTV+T+KCH+N ESKGE+DA++VN ILSGI
Sbjct: 62 CEKGLPPHVVVQNPAVRSSKYRSDTYFGPGTVDTVKCHLNAVESKGEIDAVYVNTILSGI 121
Query: 164 QQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLT 223
QQRNLERAWGKPVLDRVGLIIEIFNAHA TKEAKLQAELAALMYK++RLVRVRGPDGR T
Sbjct: 122 QQRNLERAWGKPVLDRVGLIIEIFNAHAQTKEAKLQAELAALMYKRTRLVRVRGPDGRYT 181
Query: 224 FGETGEAEVVSARG----RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTR 279
FG TGE EVVSARG RGSGGRGFISGAGETELQLQRRRILERR+HLLSQIE VRRTR
Sbjct: 182 FGATGETEVVSARGVHHRRGSGGRGFISGAGETELQLQRRRILERRNHLLSQIEAVRRTR 241
Query: 280 AVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSV 339
A+QRA+R+R GGS+G+GLATVA+VGYTNAGKSTLVSALS+SDLFSD RLFAT+DPRL+SV
Sbjct: 242 ALQRASRKRRGGSNGQGLATVAIVGYTNAGKSTLVSALSESDLFSDDRLFATVDPRLRSV 301
Query: 340 VLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVL 398
+LPSG KVLLSDTVGFISDLP+QLV+AFHATLEEVVEADLLVHVLD +A +L+E R+ VL
Sbjct: 302 ILPSGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVLDSSASDLDEQRSVVL 361
Query: 399 QVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID-GDD--ISNFSRAEDKDTTSEPV 455
QVLQQ+GVSEEKL+NM+EVWNKID +EEMG +Y+D G+D + + S AED D SE +
Sbjct: 362 QVLQQIGVSEEKLQNMLEVWNKIDLQEEEMGADKYLDNGEDDVVDSLSGAEDDDMPSE-L 420
Query: 456 DVECIDNYGGDDADNNDGFVSE----DLGESMNKNHNDYSDGWLL---SGDEQDNVEEEF 508
E + DD D ND VSE D+ E+M+ + DYSDGWL G E D
Sbjct: 421 PAEPV-----DDDDEND-IVSELSSGDVQETMDDHEGDYSDGWLSRGGEGSEDDQGNPSR 474
Query: 509 WNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQ 568
W +DQQ ES KD + EKDS SQ Q P VK SA GVGLQELL +IDE+L+T Q
Sbjct: 475 WKTMDDQQSESFKDRRMTEKDSCSQPQCIPHVKTSAVMGVGLQELLALIDEKLET----Q 530
Query: 569 KSPNVVERDFFNKKWRPPRTEDSSVAVE 596
K P ER++F++KWRPP TED VAVE
Sbjct: 531 KVP---ERNYFDRKWRPPHTEDVGVAVE 555
>gi|255579523|ref|XP_002530604.1| GTP-binding protein hflx, putative [Ricinus communis]
gi|223529852|gb|EEF31784.1| GTP-binding protein hflx, putative [Ricinus communis]
Length = 625
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/590 (66%), Positives = 471/590 (79%), Gaps = 23/590 (3%)
Query: 15 SITQTLTFPISLHSYSYSS-SKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKP 73
+++QTLT S ++S S +Q + N ++ D H VV++ NRDP PPRLF+VQPRL+P
Sbjct: 17 ALSQTLTIINPHQSITHSQFSSKQHQQNSNEIDTHGVVSIINRDPTSPPRLFVVQPRLRP 76
Query: 74 PTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPG 133
+FLQAKLNEALCLANSLEEQRDGYFDTDFFDK LPPHV+VQNP L+S +ARADTFFGPG
Sbjct: 77 DSFLQAKLNEALCLANSLEEQRDGYFDTDFFDKALPPHVIVQNPILRSSRARADTFFGPG 136
Query: 134 TVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHT 193
TV TIKCH+N +ESKGE+DA+FVN++L+G+QQRNLERAWG+PVLDRVGLIIEIFNAHAHT
Sbjct: 137 TVNTIKCHLNASESKGEVDAVFVNSVLTGVQQRNLERAWGRPVLDRVGLIIEIFNAHAHT 196
Query: 194 KEAKLQAELAALMYKKSRLVRVRGPDGRLT----FGETGEAEVVSARGRGSGGRGFISGA 249
KEAKLQ+ELAALMYKKSRLVR RG DGR T F + E+ RGSGGRGFISGA
Sbjct: 197 KEAKLQSELAALMYKKSRLVRARGLDGRYTXLLQFLRL-KIEI----WRGSGGRGFISGA 251
Query: 250 GETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAG 309
GETELQLQRRRILERR++LLSQI EVRRTRAVQRAAR+R G +GLATVAVVGYTNAG
Sbjct: 252 GETELQLQRRRILERRNYLLSQIREVRRTRAVQRAARKRDDGLHNKGLATVAVVGYTNAG 311
Query: 310 KSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHA 368
KST+VS LS+SDL+SD+RLFATLDPRLKSVVLPSG KVL SDTVGFISDLP+QLV+AF A
Sbjct: 312 KSTMVSTLSNSDLYSDSRLFATLDPRLKSVVLPSGRKVLFSDTVGFISDLPVQLVEAFRA 371
Query: 369 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEM 428
TLEEVVEADLLVHV+D TAPNLEEH TTVLQVLQQ+GVS+EKL++MIEVWNKIDY +EEM
Sbjct: 372 TLEEVVEADLLVHVIDSTAPNLEEHHTTVLQVLQQIGVSKEKLQSMIEVWNKIDYEEEEM 431
Query: 429 GDVEYIDGDDI--SNFSRAEDKDTTSEPVDVECIDNYGGD--DADNNDGFVSEDLGESMN 484
DV++ DD+ S++S ED D SE + DN G + +A N +G D+ E+++
Sbjct: 432 -DVDH-SADDVDGSSWSGDEDDDIASE-ISSRIEDNKGNNCLEAQNGEG----DIEETLD 484
Query: 485 KNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVKISA 544
+YSDGWLLSGDE++ V + + +DQQ +++ + V KD SQ +H P VK SA
Sbjct: 485 SVEGEYSDGWLLSGDERELVGDNWLKTLDDQQCKASDNPGV-GKDILSQAEHGPHVKTSA 543
Query: 545 RTGVGLQELLEIIDERLKTLDDKQKSPNVVERDFFNKKWRPPRTEDSSVA 594
TGVGLQELL ++DERLKT D+ K+ NVV RD F +KWRP R +D+ A
Sbjct: 544 ITGVGLQELLVLVDERLKTQDEMLKAQNVVGRDLFYRKWRPSRADDTEAA 593
>gi|296084742|emb|CBI25886.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/595 (65%), Positives = 457/595 (76%), Gaps = 63/595 (10%)
Query: 11 TQLRSITQTLTFP-ISLHSYSYSSSKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQP 69
T SI L FP IS+ S S+S QT + K+D ++ +LFNRDP PP+LF+VQP
Sbjct: 40 TNPSSIPPNLQFPPISILSSSFS----QTPLLQKKEDPYNDASLFNRDPKSPPKLFVVQP 95
Query: 70 RLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTF 129
RL+P T LQAKL+EA+ LANSLEEQRDGY+DT+ +K LPPHVVVQNP+++S K R+DT+
Sbjct: 96 RLRPDTLLQAKLDEAINLANSLEEQRDGYYDTELCEKGLPPHVVVQNPAVRSSKYRSDTY 155
Query: 130 FGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNA 189
FGPGTV+T+KCH+N ESKGE+DA++VN ILSGIQQRNLERAWGKPVLDRVGLIIEIFNA
Sbjct: 156 FGPGTVDTVKCHLNAVESKGEIDAVYVNTILSGIQQRNLERAWGKPVLDRVGLIIEIFNA 215
Query: 190 HAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGA 249
HA TKEAKLQAELAALMYK++RLVRVRGPDGR TFG TGE EVVSARGRGSGGRGFISGA
Sbjct: 216 HAQTKEAKLQAELAALMYKRTRLVRVRGPDGRYTFGATGETEVVSARGRGSGGRGFISGA 275
Query: 250 GETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAG 309
GETELQLQRRRILERR+HLLSQIE VRRTRA+QRA+R+R GGS+G+GLATVA+VGYTNAG
Sbjct: 276 GETELQLQRRRILERRNHLLSQIEAVRRTRALQRASRKRRGGSNGQGLATVAIVGYTNAG 335
Query: 310 KSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHA 368
KSTLVSALS+SDLFSD RLFAT+DPRL+SV+LPSG KVLLSDTVGFISDLP+QLV+AFHA
Sbjct: 336 KSTLVSALSESDLFSDDRLFATVDPRLRSVILPSGRKVLLSDTVGFISDLPVQLVEAFHA 395
Query: 369 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEM 428
TLEEVVEADLLVHVLD +A +L+E R+ VLQVLQQ+GVSEEKL+NM+EVWNKID +EEM
Sbjct: 396 TLEEVVEADLLVHVLDSSASDLDEQRSVVLQVLQQIGVSEEKLQNMLEVWNKIDLQEEEM 455
Query: 429 GDVEYIDG---DDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE----DLGE 481
G +Y+D D + + S AED D SE + E +D D D ND VSE D+ E
Sbjct: 456 GADKYLDNGEDDVVDSLSGAEDDDMPSE-LPAEPVD-----DDDEND-IVSELSSGDVQE 508
Query: 482 SMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVK 541
+M+ + DYSD DS SQ Q P VK
Sbjct: 509 TMDDHEGDYSD------------------------------------DSCSQPQCIPHVK 532
Query: 542 ISARTGVGLQELLEIIDERLKTLDDKQKSPNVVERDFFNKKWRPPRTEDSSVAVE 596
SA GVGLQELL +IDE+L+T QK P ER++F++KWRPP TED VAVE
Sbjct: 533 TSAVMGVGLQELLALIDEKLET----QKVP---ERNYFDRKWRPPHTEDVGVAVE 580
>gi|449438863|ref|XP_004137207.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like
[Cucumis sativus]
Length = 593
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/567 (66%), Positives = 443/567 (78%), Gaps = 21/567 (3%)
Query: 24 ISLHSYSYSSSKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNE 83
I + S +S S + K+ D DDL +LFNRD PP+LF+VQPRL+P TFLQAKLNE
Sbjct: 45 ILILSSPFSHSSKHKKE--DSDDL----SLFNRDLTAPPKLFVVQPRLRPYTFLQAKLNE 98
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
ALCLANSLEEQRDGYF DFFDK++PP+VVVQNPS++ ARADT+FGPGTV+TIKCH+N
Sbjct: 99 ALCLANSLEEQRDGYFHIDFFDKDVPPYVVVQNPSVRG--ARADTYFGPGTVDTIKCHLN 156
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
AESK E+DAIFVNA LSG QQRNLE AW KPVLDRVGLIIEIFNAHA+TKEAKLQAELA
Sbjct: 157 AAESKSEVDAIFVNATLSGSQQRNLEWAWNKPVLDRVGLIIEIFNAHAYTKEAKLQAELA 216
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
ALMYKKSRLVRVRG DGR FG GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE
Sbjct: 217 ALMYKKSRLVRVRGLDGRYAFGARGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 276
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
RR+HL SQIEEVRRTR++QRA+R+RHGGS+G+ LATVAVVGYTNAGKSTLVSALSD+DL+
Sbjct: 277 RRNHLYSQIEEVRRTRSLQRASRKRHGGSNGQHLATVAVVGYTNAGKSTLVSALSDNDLY 336
Query: 324 SDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 382
SD+RLFAT+DPRL+SV LPSG KV+LSDTVGFISDLP+QLV+AFHATLEEVVEADLLVHV
Sbjct: 337 SDSRLFATVDPRLRSVFLPSGRKVVLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHV 396
Query: 383 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNF 442
+DCTAPNL+EHR+TVLQVLQQ+GVS+ KL++M+EVWNKIDYH E E I DD +
Sbjct: 397 VDCTAPNLDEHRSTVLQVLQQIGVSKMKLQDMVEVWNKIDYHQEG----ESI--DDSCDD 450
Query: 443 SRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQD 502
E +++ E N G + + V + G+ K + G + G E D
Sbjct: 451 DNGEAANSSGED------SNEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNRMEGQESD 504
Query: 503 NVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLK 562
++ + EDQ P + K + E S DQ P V+ISAR GVGL ELL++ID +LK
Sbjct: 505 CCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLK 564
Query: 563 TLDDKQKSPNVVERDFFNKKWRPPRTE 589
D+K ++ NV+ER+ F++KWRP + E
Sbjct: 565 VQDEKLQAQNVLERNVFDRKWRPSQME 591
>gi|357493997|ref|XP_003617287.1| GTP-binding protein [Medicago truncatula]
gi|355518622|gb|AET00246.1| GTP-binding protein [Medicago truncatula]
Length = 591
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/540 (67%), Positives = 428/540 (79%), Gaps = 35/540 (6%)
Query: 59 DDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPS 118
D PP+L +VQPRL+ LQAKLNEALCLANSLE+QRDGYF TDFFD LPPHV+VQNPS
Sbjct: 38 DAPPKLLVVQPRLRSEKLLQAKLNEALCLANSLEDQRDGYFHTDFFDLPLPPHVIVQNPS 97
Query: 119 LKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLD 178
LK KARADT+FGPGTV+TIKCH+N ESKGE+DA+FVNAILSGIQ RN+ERAW KPV+D
Sbjct: 98 LKGHKARADTYFGPGTVDTIKCHLNAVESKGEVDAVFVNAILSGIQIRNMERAWNKPVVD 157
Query: 179 RVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR 238
RVGLIIEIFNAHA TKEAKLQAELAAL YKKSRLVRV GP+GRLTFG +GEAEVVSARGR
Sbjct: 158 RVGLIIEIFNAHAFTKEAKLQAELAALSYKKSRLVRVLGPNGRLTFGGSGEAEVVSARGR 217
Query: 239 GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
GSGG+GF+SGAGETELQLQRRR+L+RR++LL+QIEEVRRTRAVQRA R+R GGS + LA
Sbjct: 218 GSGGQGFMSGAGETELQLQRRRLLDRRNYLLTQIEEVRRTRAVQRAGRKRQGGSSAQRLA 277
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISD 357
T+AVVGYTNAGKSTLVS L+DSDL+SD RLFAT+DPRL+S VLPSG KVL SDTVGFISD
Sbjct: 278 TIAVVGYTNAGKSTLVSNLTDSDLYSDCRLFATVDPRLRSAVLPSGRKVLFSDTVGFISD 337
Query: 358 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 417
LP++LV+AFHATLEEVVEADLLVHV+D TAPNLEEHRTTV QVLQQ+GVS+EKL+NMIEV
Sbjct: 338 LPVKLVEAFHATLEEVVEADLLVHVVDSTAPNLEEHRTTVFQVLQQIGVSQEKLQNMIEV 397
Query: 418 WNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE 477
WNKID +EE DV+ E VD ++ D+ + DG E
Sbjct: 398 WNKID-AEEEFTDVD--------------------ENVDEHLNEDEEADETSSIDG--EE 434
Query: 478 DLG-ESMNKNHNDYSDGWLLSGDEQDNVEEE----FWNAAEDQQPEST-KDVCVMEKDSQ 531
D+ E++ + DYSDGWL E+D V E ++A DQQ ES+ KD V +++
Sbjct: 435 DVNIETLTEEKEDYSDGWLY---EEDTVLNEGDFCLPSSAADQQIESSNKDNSV--ENAG 489
Query: 532 SQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVERDFFNKKWRPPRTEDS 591
+ +P VK SA TGVGLQEL+E+IDE+L + D+K K VVER+ F++KWRP T+DS
Sbjct: 490 AMLPSSPHVKTSAITGVGLQELMELIDEKLSSQDEKLKGAQVVERNLFDRKWRPSHTQDS 549
>gi|449483318|ref|XP_004156554.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein At3g49725,
chloroplastic-like [Cucumis sativus]
Length = 631
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/557 (65%), Positives = 430/557 (77%), Gaps = 21/557 (3%)
Query: 24 ISLHSYSYSSSKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNE 83
I + S +S S + K+ D DDL +LFNRD PP+LF+VQPRL+P TFLQAKLNE
Sbjct: 45 ILILSSPFSHSSKHKKE--DSDDL----SLFNRDLTAPPKLFVVQPRLRPYTFLQAKLNE 98
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
ALCLANSLEEQRDGYF DFFDK++PP+VVVQNPS++ ARADT+FGPGTV+TIKCH+N
Sbjct: 99 ALCLANSLEEQRDGYFHIDFFDKDVPPYVVVQNPSVRG--ARADTYFGPGTVDTIKCHLN 156
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
AESK IFVNA LSG QQRNLE AW KPVLDRVGLIIEIFNAHA+TKEAKLQAELA
Sbjct: 157 AAESKVXSRCIFVNATLSGSQQRNLEWAWNKPVLDRVGLIIEIFNAHAYTKEAKLQAELA 216
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
ALMYKKSRLVRVRG DGR FG GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE
Sbjct: 217 ALMYKKSRLVRVRGLDGRYAFGARGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 276
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
RR+HL SQIEEVRRTR++QRA+R+RHGGS+G+ LATVAVVGYTNAGKSTLVSALSD+DL+
Sbjct: 277 RRNHLYSQIEEVRRTRSLQRASRKRHGGSNGQHLATVAVVGYTNAGKSTLVSALSDNDLY 336
Query: 324 SDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 382
SD+RLFAT+DPRL+SV LPSG KV+LSDTVGFISDLP+QLV+AFHATLEEVVEADLLVHV
Sbjct: 337 SDSRLFATVDPRLRSVFLPSGRKVVLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHV 396
Query: 383 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNF 442
+DCTAPNL+EHR+TVLQVLQQ+GVS+ KL++M+EVWNKIDYH E E I DD +
Sbjct: 397 VDCTAPNLDEHRSTVLQVLQQIGVSKMKLQDMVEVWNKIDYHQEG----ESI--DDSCDD 450
Query: 443 SRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQD 502
E +++ E N G + + V + G+ K + G + G E D
Sbjct: 451 DNGEAANSSGED------SNEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNRMEGQESD 504
Query: 503 NVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLK 562
++ + EDQ P + K + E S DQ P V+ISAR GVGL ELL++ID +LK
Sbjct: 505 CCDDWLQDDDEDQNPWADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLK 564
Query: 563 TLDDKQKSPNVVERDFF 579
D+K ++ NV+ER+
Sbjct: 565 VQDEKLQAQNVLERNVL 581
>gi|356499317|ref|XP_003518488.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like
[Glycine max]
Length = 594
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/544 (66%), Positives = 415/544 (76%), Gaps = 25/544 (4%)
Query: 62 PRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKS 121
P+L +VQPR++P LQAKLNEALCLANSLE+QRDGYF TDFFDK LPPHV+VQN
Sbjct: 66 PKLLVVQPRVRPEKLLQAKLNEALCLANSLEDQRDGYFHTDFFDKPLPPHVLVQNRL--- 122
Query: 122 GKARADTFFGPGTVETIKCHINGA-ESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
RADT+FG GTV+ IK HI+ A ESKG++DA+FVNAILSGIQQRNLE AWGKPVLDRV
Sbjct: 123 --PRADTYFGRGTVDNIKVHIDAAAESKGDVDAVFVNAILSGIQQRNLEMAWGKPVLDRV 180
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLIIEIFNAHA TKEAKLQAELAAL YKK+RLVR+RGPDGR TFG +GEAEV RGS
Sbjct: 181 GLIIEIFNAHAFTKEAKLQAELAALSYKKTRLVRIRGPDGRNTFGASGEAEV----WRGS 236
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG+GF+SGAGETELQLQRRRILERR++LLSQIEEVRRTRA+QRA R+R GGS G GLATV
Sbjct: 237 GGQGFMSGAGETELQLQRRRILERRNYLLSQIEEVRRTRALQRAGRKRRGGSSGEGLATV 296
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLP 359
AVVGYTNAGKSTLVS LSDSDL+SD RLFAT+DPR++S VLPSG KVL SDTVGFISDLP
Sbjct: 297 AVVGYTNAGKSTLVSRLSDSDLYSDCRLFATVDPRVRSAVLPSGKKVLFSDTVGFISDLP 356
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
+QLV+AF ATLEEVVEADLLVHV+D +APNL+EHR+TV QVLQQ+GVSEEKL+NMIEVWN
Sbjct: 357 VQLVEAFQATLEEVVEADLLVHVVDSSAPNLDEHRSTVFQVLQQIGVSEEKLQNMIEVWN 416
Query: 420 KIDYHDEEMGDVEYIDGDDIS-----NFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGF 474
KID +E M EY+D +D N S + + D SE + D G N+G
Sbjct: 417 KIDMEEECMDVDEYLDDEDKDGDADENSSFSGEDDVKSEVLPEREKDRAGSISGAENEGI 476
Query: 475 VSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAA--EDQQPESTKDVCVMEKDSQS 532
D E M + DYSDGWL D D E+EF + + DQQ ES K + KD S
Sbjct: 477 KEVDC-EGMEEKE-DYSDGWLYDDDLVD--EDEFCSPSTVADQQNESYKKDNSVVKDG-S 531
Query: 533 QDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVERDFFNKKWRPPRTEDSS 592
Q P VK SA TGVGLQELLE+ID++L +K VVER +++KWRP ++S
Sbjct: 532 IGQSGPHVKTSAVTGVGLQELLELIDKKLSV--QNKKGARVVERSIYDRKWRPSHNQESG 589
Query: 593 VAVE 596
+AVE
Sbjct: 590 IAVE 593
>gi|147801371|emb|CAN74733.1| hypothetical protein VITISV_037839 [Vitis vinifera]
Length = 743
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 353/565 (62%), Positives = 413/565 (73%), Gaps = 53/565 (9%)
Query: 42 KDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDT 101
K K+D ++ +LFNRDP PP+LF+VQPRL+P T LQAKL+EA+ LANSLEEQRDGY+DT
Sbjct: 222 KKKEDPYNDASLFNRDPKSPPKLFVVQPRLRPDTLLQAKLDEAINLANSLEEQRDGYYDT 281
Query: 102 DFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILS 161
+ +K LPPHVVVQNP+++S K R+ + C + G L + N
Sbjct: 282 ELCEKGLPPHVVVQNPAVRSSKYRSVR-----KSYCLACIFLKRDDYGTLFFLHSNF--- 333
Query: 162 GIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGR 221
+RAWGKPVLDRVGLIIEIFNAHA TKEAKLQAELAALMYK++RLVRVRGPDGR
Sbjct: 334 -----KWQRAWGKPVLDRVGLIIEIFNAHAQTKEAKLQAELAALMYKRTRLVRVRGPDGR 388
Query: 222 LTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAV 281
TFG TGE EVVSARGRGSGGRGFISGAGETELQLQRRRILERR+HLLSQIE VRRTRA+
Sbjct: 389 YTFGATGETEVVSARGRGSGGRGFISGAGETELQLQRRRILERRNHLLSQIEAVRRTRAL 448
Query: 282 QRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL 341
QRA+R+R GGS+G+GLATVA+VGYTNAGKSTLVSALS+SDLFSD R
Sbjct: 449 QRASRKRRGGSNGQGLATVAIVGYTNAGKSTLVSALSESDLFSDDR-------------- 494
Query: 342 PSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVL 401
KVLLSDTVGFISDLP+QLV+AFHATLEEVVEADLLVHVLD +A +L+E R+ VLQVL
Sbjct: 495 --RKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVLDSSASDLDEQRSVVLQVL 552
Query: 402 QQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID-GDD--ISNFSRAEDKDTTSEPVDVE 458
QQ+GVSEEKL+NM+EVWNKID +EEMG +Y+D G+D + + S AED D SE + E
Sbjct: 553 QQIGVSEEKLQNMLEVWNKIDLQEEEMGADKYLDNGEDDVVDSLSGAEDDDMPSE-LPAE 611
Query: 459 CIDNYGGDDADNNDGFVSE----DLGESMNKNHNDYSDGWLL---SGDEQDNVEEEFWNA 511
+ DD D ND VSE D+ E+M+ + DYSDGWL G E D W
Sbjct: 612 PV-----DDDDEND-IVSELSSGDVQETMDDHEGDYSDGWLSRGGEGSEDDQGNPSRWKT 665
Query: 512 AEDQQPESTKDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSP 571
+DQQ ES KD + EKDS SQ Q P VK SA GVGLQELL +IDE+L+T QK P
Sbjct: 666 MDDQQSESFKDRRMTEKDSCSQPQCIPHVKTSAVMGVGLQELLALIDEKLET----QKVP 721
Query: 572 NVVERDFFNKKWRPPRTEDSSVAVE 596
ER++F++KWRPP TED VAVE
Sbjct: 722 ---ERNYFDRKWRPPHTEDVGVAVE 743
>gi|238480011|ref|NP_001154669.1| GTP-binding protein, HflX [Arabidopsis thaliana]
gi|218551791|sp|Q0WTB4.2|Y3725_ARATH RecName: Full=GTP-binding protein At3g49725, chloroplastic; Flags:
Precursor
gi|332645061|gb|AEE78582.1| GTP-binding protein, HflX [Arabidopsis thaliana]
Length = 620
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 351/611 (57%), Positives = 423/611 (69%), Gaps = 61/611 (9%)
Query: 1 MLRAISVVKRTQLRSITQTLTFP-----ISLHSYSYSSSKRQTKDNKDKDD---LHDVVT 52
MLR +S+ R +LRS T + S S SSKR T + ++ D V
Sbjct: 39 MLRTVSLA-RNRLRSETPSSFLARDRLRSKTPSSSPFSSKRHTPKTSEIEEESTPKDSVL 97
Query: 53 LFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHV 112
L +DP P+LFLVQPRL PP +LQAKLNEALCLANSLEEQR GYF++DFFDKELP HV
Sbjct: 98 LNPKDPSSAPKLFLVQPRLAPPKYLQAKLNEALCLANSLEEQRYGYFESDFFDKELPSHV 157
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VVQNP +S K R DT+FG GTV+ IKCH+N +SK E+DA+FVNAIL+ IQQRNLER W
Sbjct: 158 VVQNPVRRSSKPRVDTYFGSGTVDNIKCHLNAEDSKEEVDAVFVNAILTAIQQRNLERIW 217
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
KPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMY KSRLVRVRG DGR TFG+ GEAEV
Sbjct: 218 AKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYNKSRLVRVRGTDGRHTFGQFGEAEV 277
Query: 233 VSARGRGSGG---RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
VSARGR GF+ GAGETELQLQRRRI +RR LLSQI+E +RTR +QRA R++
Sbjct: 278 VSARGRAGSKGTGGGFVGGAGETELQLQRRRISDRRIRLLSQIKEAQRTRLLQRAGRKKR 337
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLL 348
G +G T+AVVGYTNAGKSTL+SAL+ + L+ + RLFATLDP LKS LPSG VLL
Sbjct: 338 VGLEGESSGTIAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGNFVLL 397
Query: 349 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 408
SDTVGFISDLP+QLV AF +TLEEVVEADLL+HV+D TAPN+EEHR+TVL VL Q+GV E
Sbjct: 398 SDTVGFISDLPIQLVKAFQSTLEEVVEADLLLHVVDSTAPNIEEHRSTVLHVLNQIGVPE 457
Query: 409 EKLKNMIEVWNKIDYHDEEMGDVEYI--------DGDDISNFSRAEDKDTTSEPVDVECI 460
EKL+NMIEVWNKIDY ++E+ + +Y+ + +D ++ E D + VD + I
Sbjct: 458 EKLQNMIEVWNKIDYEEDEVEEEKYLDDGEGVGEEDEDEADLKAEETVDASEATVDEDQI 517
Query: 461 DNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPEST 520
N GDDA DGWLLS DE + + EFW PE
Sbjct: 518 QNGDGDDA-----------------------DGWLLSEDENAD-DPEFWKV-----PEVA 548
Query: 521 KDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVER-DFF 579
K + ++ PDV++SA TGVGL+ELL +ID+++K + K KSP +VER +
Sbjct: 549 K--------VDAANKKGPDVRVSALTGVGLKELLYLIDDKMK--EKKLKSPTIVERSELH 598
Query: 580 NKKWRPPRTED 590
+KWRPPR +D
Sbjct: 599 KRKWRPPRNDD 609
>gi|110743594|dbj|BAE99634.1| hypothetical protein [Arabidopsis thaliana]
Length = 620
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 350/611 (57%), Positives = 424/611 (69%), Gaps = 61/611 (9%)
Query: 1 MLRAISVVKRTQLRSITQTLTFP-----ISLHSYSYSSSKR---QTKDNKDKDDLHDVVT 52
MLR +S+ R +LRS T + S S SSKR +T + +++ D V
Sbjct: 39 MLRTVSLA-RNRLRSETPSSFLARDRLRSKTPSSSPFSSKRHTPKTSEIEEESTPKDSVL 97
Query: 53 LFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHV 112
L +DP P+LFLVQPRL PP +LQAKLNEALCLANSLEEQR GYF++DFFDKELP HV
Sbjct: 98 LNPKDPSSAPKLFLVQPRLAPPKYLQAKLNEALCLANSLEEQRYGYFESDFFDKELPSHV 157
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VVQNP +S K R DT+FG GTV+ IKCH+N +SK E+DA+FVNAIL+ IQQRNLER W
Sbjct: 158 VVQNPVRRSSKPRVDTYFGSGTVDNIKCHLNAEDSKEEVDAVFVNAILTAIQQRNLERIW 217
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
KPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMY KSRLVRVRG DGR TFG+ GEAEV
Sbjct: 218 AKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYNKSRLVRVRGTDGRHTFGQFGEAEV 277
Query: 233 VSARGRGSGG---RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
VSARGR GF+ GAGETELQLQRRRI +RR LLSQI+E +RTR +QRA R++
Sbjct: 278 VSARGRAGSKGTGGGFVGGAGETELQLQRRRISDRRIRLLSQIKEAQRTRLLQRAGRKKR 337
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLL 348
G +G T+AVVGYTNAGKSTL+SAL+ + L+ + RLFATLDP LKS LPSG VLL
Sbjct: 338 VGLEGESSGTIAVVGYTNAGKSTLISALTKAALYCNERLFATLDPTLKSAHLPSGNFVLL 397
Query: 349 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 408
SDTVGFISDLP+QLV AF +TLEEVVEADLL+HV+D TAPN+EEHR+TVL VL Q+GV E
Sbjct: 398 SDTVGFISDLPIQLVKAFQSTLEEVVEADLLLHVVDSTAPNIEEHRSTVLHVLNQIGVPE 457
Query: 409 EKLKNMIEVWNKIDYHDEEMGDVEYI--------DGDDISNFSRAEDKDTTSEPVDVECI 460
EKL+NMIEVWNKIDY ++E+ + +Y+ + +D ++ E D + VD + I
Sbjct: 458 EKLQNMIEVWNKIDYEEDEVEEEKYLDDGEGVGEEDEDEADLKAEETVDASEATVDEDQI 517
Query: 461 DNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPEST 520
N GDDA DGWLLS DE + + FW PE
Sbjct: 518 QNGDGDDA-----------------------DGWLLSEDENAD-DPGFWKV-----PEVA 548
Query: 521 KDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVER-DFF 579
K + ++ PDV++SA TGVGL+ELL +ID+++K + K KSP +VER +
Sbjct: 549 K--------VDAANKKGPDVRVSALTGVGLKELLYLIDDKMK--EKKLKSPTIVERSELH 598
Query: 580 NKKWRPPRTED 590
+KWRPPR +D
Sbjct: 599 KRKWRPPRNDD 609
>gi|414872584|tpg|DAA51141.1| TPA: hypothetical protein ZEAMMB73_713960 [Zea mays]
gi|414872585|tpg|DAA51142.1| TPA: hypothetical protein ZEAMMB73_713960 [Zea mays]
Length = 588
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 332/562 (59%), Positives = 410/562 (72%), Gaps = 29/562 (5%)
Query: 32 SSSKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSL 91
SS D D+ L + L +RDP+ PPRL +VQPRL+P + L++KL EAL LANSL
Sbjct: 37 SSPTLSPADCDDEGPLRGLFVL-SRDPECPPRLLVVQPRLRPGSLLESKLAEALNLANSL 95
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EE+RDG++ ++F K PPH+VVQNP+ + G++ ADT+FGPGTV+ +KC+++ ES+ ++
Sbjct: 96 EERRDGFYHSEFGAKGAPPHLVVQNPASR-GRSHADTYFGPGTVDNVKCYLSATESEEDV 154
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
DA+FVNAILSGIQQRNLE AWGK VLDRVGLIIEIFNAHA TKEAKLQ+ELAALMY K+R
Sbjct: 155 DAVFVNAILSGIQQRNLEVAWGKSVLDRVGLIIEIFNAHAETKEAKLQSELAALMYMKTR 214
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETE--LQLQRRRILERRSHLL 269
LVRVRGP GRLTFG +GEAEVVSARGRGSGGRGF+SGAGETE LQRRRI ERR LL
Sbjct: 215 LVRVRGPGGRLTFGPSGEAEVVSARGRGSGGRGFMSGAGETELQ--LQRRRIQERRVSLL 272
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
+QIE+VRRTRA+QR++R+RHGGS G+ L TVAVVGYTNAGKSTLVSALS++DL+SD RLF
Sbjct: 273 AQIEDVRRTRAIQRSSRKRHGGSFGQELVTVAVVGYTNAGKSTLVSALSEADLYSDDRLF 332
Query: 330 ATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 388
AT+DPRL+SV+LPSG K LLSDTVGFISDLP+QLV+AFHATLEEVVEAD+LVHVLD +A
Sbjct: 333 ATVDPRLRSVILPSGRKALLSDTVGFISDLPVQLVEAFHATLEEVVEADMLVHVLDSSAS 392
Query: 389 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDG-DDISNFSRAED 447
NLEEHR+TVLQVLQQ+GVS+EK+ NMIEVWNKID DE + DG DD + E
Sbjct: 393 NLEEHRSTVLQVLQQIGVSQEKINNMIEVWNKIDLVDENVKS----DGIDDEVFLTEGEQ 448
Query: 448 KDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEE 507
+D D + D D +DG SE L E +++ N+ L + E
Sbjct: 449 EDDIFSEDDAPS-EQTSFDSVDVDDGADSEYLSEENSEDSNE------LPSKKSFAEPTE 501
Query: 508 FWNAAEDQQPESTKDVCVMEKDSQSQDQHAPD--VKISARTGVGLQELLEIIDERLKTLD 565
E E ++ V++ + + Q A VK SA TG GLQELL +I+ +L
Sbjct: 502 MGAMKELSSKECFGELRVLDTNGHTFPQPASTCHVKTSAVTGTGLQELLALIERKLT--- 558
Query: 566 DKQKSPNVVERDF--FNKKWRP 585
+ VV+R + F++KWRP
Sbjct: 559 ---EQQTVVQRSYGPFDRKWRP 577
>gi|226493944|ref|NP_001145694.1| uncharacterized protein LOC100279198 [Zea mays]
gi|219884045|gb|ACL52397.1| unknown [Zea mays]
Length = 588
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 331/553 (59%), Positives = 408/553 (73%), Gaps = 30/553 (5%)
Query: 43 DKDDLHDVVTLF--NRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFD 100
D DD + LF +RDP+ PPRL +VQPRL+P + L++KL EAL LANSLEE+RDG++
Sbjct: 45 DCDDEGPLRGLFVLSRDPECPPRLLVVQPRLRPGSLLESKLAEALNLANSLEERRDGFYH 104
Query: 101 TDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAIL 160
++F K PPH+VVQNP+ + G++ ADT+FGPGTV+ +KC+++ ES+ ++DA+FVNAIL
Sbjct: 105 SEFGAKGAPPHLVVQNPASR-GRSHADTYFGPGTVDNVKCYLSATESEEDVDAVFVNAIL 163
Query: 161 SGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDG 220
SGIQQRNLE AWGK VLDRVGLIIEIFNAHA TKEAKLQ+ELAALMY K+RLVRVRGP G
Sbjct: 164 SGIQQRNLEVAWGKSVLDRVGLIIEIFNAHAETKEAKLQSELAALMYMKTRLVRVRGPGG 223
Query: 221 RLTFGETGEAEVVSARGRGSGGRGFISGAGETE--LQLQRRRILERRSHLLSQIEEVRRT 278
RLTFG +GEAEVVSARGRGSGGRGF+SGAGETE LQRRRI ERR LL+QIE+VRRT
Sbjct: 224 RLTFGPSGEAEVVSARGRGSGGRGFMSGAGETELQ--LQRRRIQERRVSLLAQIEDVRRT 281
Query: 279 RAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKS 338
RA+QR++R+RHGGS G+ L TVAVVGYTNAGKSTLVSALS++DL+SD RLFAT+DPRL+S
Sbjct: 282 RAIQRSSRKRHGGSFGQELVTVAVVGYTNAGKSTLVSALSEADLYSDDRLFATVDPRLRS 341
Query: 339 VVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTV 397
V+LPSG K LLSDTVGFISDLP+QLV+AFHATLEEVVEAD+LVHVLD +A NLEEHR+TV
Sbjct: 342 VILPSGRKALLSDTVGFISDLPVQLVEAFHATLEEVVEADMLVHVLDSSASNLEEHRSTV 401
Query: 398 LQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDG-DDISNFSRAEDKDTTSEPVD 456
LQVLQQ+GVS+EK+ NMIEVWNKID DE + DG DD + E +D D
Sbjct: 402 LQVLQQIGVSQEKINNMIEVWNKIDLVDENVKS----DGIDDEVFLTEGEQEDDIFSEDD 457
Query: 457 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQ 516
+ D D +DG SE L E +++ N+ L + E E
Sbjct: 458 APS-EQTSFDSVDVDDGADSEYLSEENSEDSNE------LPSKKSFAEPTEMGAMKELSS 510
Query: 517 PESTKDVCVMEKDSQSQDQHAPD--VKISARTGVGLQELLEIIDERLKTLDDKQKSPNVV 574
E ++ V++ + + Q A VK SA TG GLQELL +I+ +L + VV
Sbjct: 511 KECFGELRVLDTNGHTLPQPASTCHVKTSAVTGTGLQELLALIERKLT------EQQTVV 564
Query: 575 ERDF--FNKKWRP 585
+R + F++KWRP
Sbjct: 565 QRSYGPFDRKWRP 577
>gi|115455087|ref|NP_001051144.1| Os03g0727900 [Oryza sativa Japonica Group]
gi|113549615|dbj|BAF13058.1| Os03g0727900 [Oryza sativa Japonica Group]
Length = 568
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 320/540 (59%), Positives = 388/540 (71%), Gaps = 43/540 (7%)
Query: 64 LFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGK 123
L +VQPRL+P + L +KL EAL LANSLEE RDG++ K PPH+V QNPS + G+
Sbjct: 42 LLVVQPRLRPGSLLDSKLAEALNLANSLEEPRDGFYKEGLAAKGAPPHLVAQNPSSR-GR 100
Query: 124 ARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
+ D FFGPGTV+ +KC++ +ES+ +DA+FVNAIL+GIQQRNLE AWGKPVLDRVGLI
Sbjct: 101 SHVDKFFGPGTVDNVKCYLRTSESEEGVDAVFVNAILTGIQQRNLEVAWGKPVLDRVGLI 160
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
IEIFNAHA TKEAKLQ+ELAALMY K+RLVRVRGP GRLTFG +GEAEVVSARGRGSGGR
Sbjct: 161 IEIFNAHAETKEAKLQSELAALMYMKTRLVRVRGPGGRLTFGSSGEAEVVSARGRGSGGR 220
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
GFISGAGETELQLQRRRI E R LL+QIE+VRRTRA+QR+ R+RHG S G+ L TVAVV
Sbjct: 221 GFISGAGETELQLQRRRIQECRVRLLAQIEDVRRTRAIQRSNRKRHGNSFGQELVTVAVV 280
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQL 362
GYTNAGKSTLVSALS++DL+SD RLFAT+DPRL+SV+LPSG K LLSDTVGFISDLP+QL
Sbjct: 281 GYTNAGKSTLVSALSETDLYSDDRLFATVDPRLRSVILPSGRKALLSDTVGFISDLPVQL 340
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V+AFHATLEEVVEAD+LVHVLD +APN+EEHR+TVLQVLQQ+GVS++K+ +MIEVWNKID
Sbjct: 341 VEAFHATLEEVVEADMLVHVLDSSAPNIEEHRSTVLQVLQQIGVSQDKINSMIEVWNKID 400
Query: 423 YHDEEMGDVEYIDGDDI--------SNFSRAEDKDTTSEPVDVECIDN------YGGDDA 468
D DV D+I + D +E E +D+ ++
Sbjct: 401 IVDNNDNDVTDDIEDEIFLTEGEEDKEEELFSENDVPAEESSFESLDDGTDSEYLSEENL 460
Query: 469 DNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPES-TKDVCVME 527
+ N+G +S L S + N +S +D E PE+ + D C
Sbjct: 461 EGNNGEISSSLEPSEMRAMNS------VSSSSKDCF-------GELCGPETISTDSC--- 504
Query: 528 KDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVERDF--FNKKWRP 585
S +Q VK SA TG GLQELLE+ID K L ++Q +VER + F++KWRP
Sbjct: 505 --SSTQPMSTCHVKTSAVTGTGLQELLELID---KKLTERQ---TIVERSYGPFDRKWRP 556
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 336/595 (56%), Positives = 403/595 (67%), Gaps = 76/595 (12%)
Query: 6 SVVKRTQLRSITQTLTFPISLHSYSYSSSKR---QTKDNKDKDDLHDVVTLFNRDPDDPP 62
S + R LRS T S S SSKR +T + +++ D V L +DP PP
Sbjct: 648 SFLARNHLRSKTP---------SSSPFSSKRHAPKTSEVEEESTPKDSVLLNPKDPSSPP 698
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
+LFLVQPRL PP LQAKLNEALCLANSLEEQR GYF++DFFDKELP HVVVQNP +S
Sbjct: 699 KLFLVQPRLAPPKLLQAKLNEALCLANSLEEQRYGYFESDFFDKELPSHVVVQNPVRRSS 758
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K R E+DA+FVNAIL+ IQQRNLER W KPVLDRVGL
Sbjct: 759 KPRE-----------------------EVDAVFVNAILTAIQQRNLERIWAKPVLDRVGL 795
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
IIEIFNAHAHTKEAKLQAELAALMY KSRLVRVRG DGR TFG+ GEAEVVSARGR
Sbjct: 796 IIEIFNAHAHTKEAKLQAELAALMYNKSRLVRVRGTDGRHTFGQFGEAEVVSARGRAGSK 855
Query: 243 ---RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GF+ GAGETELQLQRRRI +RR LLSQI+E +RTR +QRA R + G +G T
Sbjct: 856 GTGGGFVGGAGETELQLQRRRISDRRLRLLSQIKEAQRTRLLQRAGRNKRVGLEGESSGT 915
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
+AVVGYTNAGKSTL+SAL+ + L+ + RLFATLDP LKS LPSGK VLLSDTVGFISDL
Sbjct: 916 IAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGKFVLLSDTVGFISDL 975
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P+QLV AF +TLEEVVEAD+L+HV+D TAPN+EEHR+TV +L+Q+GVSEEKL+NMIEVW
Sbjct: 976 PIQLVKAFQSTLEEVVEADILLHVVDSTAPNIEEHRSTVFHILKQIGVSEEKLQNMIEVW 1035
Query: 419 NKIDY-HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE 477
NKIDY +EE+GD +Y+D E+ D +E + D + V+E
Sbjct: 1036 NKIDYEEEEEVGDAKYLD----DGEGEEEEADLKAE------------ETVDASIAAVNE 1079
Query: 478 DLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHA 537
D +N ++ SDGWLLS DE + + E W PE K + +
Sbjct: 1080 D----QIQNQDNDSDGWLLSEDENAD-DSELWKV-----PEVAK--------VDAAQKKG 1121
Query: 538 PDVKISARTGVGLQELLEIIDERLKTLDDKQ-KSPNVVER-DFFNKKWRPPRTED 590
PDV++SA TGVGL+ELL +ID+++K ++K+ KS VVER D +KWRPPR +D
Sbjct: 1122 PDVRVSALTGVGLKELLYLIDDKMKVEEEKKLKSQTVVERSDLHKRKWRPPRNDD 1176
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 331/593 (55%), Positives = 402/593 (67%), Gaps = 71/593 (11%)
Query: 6 SVVKRTQLRSITQTLTFPISLHSYSYSSSKR---QTKDNKDKDDLHDVVTLFNRDPDDPP 62
S + R +LRS T S S SSKR +T + +++ D V L +DP P
Sbjct: 644 SFLARDRLRSKTP---------SSSPFSSKRHTPKTSEIEEESTPKDSVLLNPKDPSSAP 694
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
+LFLVQPRL PP +LQAKLNEALCLANSLEEQR GYF++DFFDKELP HVVVQNP +S
Sbjct: 695 KLFLVQPRLAPPKYLQAKLNEALCLANSLEEQRYGYFESDFFDKELPSHVVVQNPVRRSS 754
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K R E+DA+FVNAIL+ IQQRNLER W KPVLDRVGL
Sbjct: 755 KPRE-----------------------EVDAVFVNAILTAIQQRNLERIWAKPVLDRVGL 791
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
IIEIFNAHAHTKEAKLQAELAALMY KSRLVRVRG DGR TFG+ GEAEVVSARGR
Sbjct: 792 IIEIFNAHAHTKEAKLQAELAALMYNKSRLVRVRGTDGRHTFGQFGEAEVVSARGRAGSK 851
Query: 243 ---RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GF+ GAGETELQLQRRRI +RR LLSQI+E +RTR +QRA R++ G +G T
Sbjct: 852 GTGGGFVGGAGETELQLQRRRISDRRIRLLSQIKEAQRTRLLQRAGRKKRVGLEGESSGT 911
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
+AVVGYTNAGKSTL+SAL+ + L+ + RLFATLDP LKS LPSG VLLSDTVGFISDL
Sbjct: 912 IAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGNFVLLSDTVGFISDL 971
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P+QLV AF +TLEEVVEADLL+HV+D TAPN+EEHR+TVL VL Q+GV EEKL+NMIEVW
Sbjct: 972 PIQLVKAFQSTLEEVVEADLLLHVVDSTAPNIEEHRSTVLHVLNQIGVPEEKLQNMIEVW 1031
Query: 419 NKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSED 478
NKIDY ++E+ + +Y+D + ++ D +E + D ++ V ED
Sbjct: 1032 NKIDYEEDEVEEEKYLDDGEGVGEEDEDEADLKAE------------ETVDASEATVDED 1079
Query: 479 LGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAP 538
+ D +DGWLLS DE + + EFW PE K + ++ P
Sbjct: 1080 ---QIQNGDGDDADGWLLSEDENAD-DPEFWKV-----PEVAK--------VDAANKKGP 1122
Query: 539 DVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVER-DFFNKKWRPPRTED 590
DV++SA TGVGL+ELL +ID+++K + K KSP +VER + +KWRPPR +D
Sbjct: 1123 DVRVSALTGVGLKELLYLIDDKMK--EKKLKSPTIVERSELHKRKWRPPRNDD 1173
>gi|357117130|ref|XP_003560327.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like
[Brachypodium distachyon]
Length = 591
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 323/546 (59%), Positives = 404/546 (73%), Gaps = 33/546 (6%)
Query: 53 LFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTD-FFDKELPPH 111
+ +RDP+ PPRL +VQPRL+P T L +KL EAL LA+SL+E RDG+ D K+ PPH
Sbjct: 55 VLSRDPEHPPRLLVVQPRLRPSTLLDSKLAEALNLASSLQEARDGFDRADESAAKDGPPH 114
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
+VVQNP+ + G+ ADT+FGPGTV+ IKC++ +++ ELDA+FVN +LSGIQQRNLE A
Sbjct: 115 LVVQNPASR-GRNHADTYFGPGTVDNIKCYLRALDAEEELDAVFVNTLLSGIQQRNLEVA 173
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
W KPVLDRVGLIIEIFNAHA TKEAKLQ+ELAALMY K+RLVRVRGP GRLTFG +GEAE
Sbjct: 174 WVKPVLDRVGLIIEIFNAHAETKEAKLQSELAALMYMKTRLVRVRGPGGRLTFGTSGEAE 233
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
VVSARGRGSGGRGF+SGAGETELQLQRRRI +RR LL+QIE+VRRTRA+QR++R+RHGG
Sbjct: 234 VVSARGRGSGGRGFMSGAGETELQLQRRRIQDRRISLLTQIEDVRRTRAIQRSSRKRHGG 293
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSD 350
S G+ L T+AVVGYTNAGKSTLVSALS++DL+SD RLFAT+DPRL+SV+LPSG K LLSD
Sbjct: 294 SFGQELVTIAVVGYTNAGKSTLVSALSEADLYSDDRLFATVDPRLRSVILPSGRKALLSD 353
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFISDLP+QLV+AFHATLEEV EAD+LVHVLD +APNL+EHR+TVLQVLQQ+GVSE+K
Sbjct: 354 TVGFISDLPVQLVEAFHATLEEVAEADMLVHVLDSSAPNLDEHRSTVLQVLQQIGVSEDK 413
Query: 411 LKNMIEVWNKIDYHDEEMGDVEYIDG--DDISNFSRAEDKDTTSE---PVDVECIDNYGG 465
+ NMIEVWNKID D DG D+I E++D SE P + D+
Sbjct: 414 INNMIEVWNKIDLVDNNA----LTDGIEDEIFLTEGEEEEDLFSEDDVPSEQSSFDSL-- 467
Query: 466 DDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPESTKDV-- 523
DD +++ E+ +K +D S + + + E ++P K V
Sbjct: 468 DDTVDSESLSEENSENGDDKMASDKSFDEPI---DMKAMNSELLTTECFREPNGPKAVTT 524
Query: 524 --CVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVERDF--F 579
C + +Q VK SA TG GLQELL++ID + L+++Q++ VV+R + F
Sbjct: 525 SGCTL-----TQSVSTCHVKTSAVTGTGLQELLQLIDTK---LNEQQQT--VVQRSYGPF 574
Query: 580 NKKWRP 585
++KWRP
Sbjct: 575 DRKWRP 580
>gi|224097214|ref|XP_002310879.1| predicted protein [Populus trichocarpa]
gi|222853782|gb|EEE91329.1| predicted protein [Populus trichocarpa]
Length = 466
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 304/449 (67%), Positives = 346/449 (77%), Gaps = 23/449 (5%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
++DA+FVNAILSGIQ RNLE DRV LIIEIFNAHAHTKEAKLQAELAALMY K
Sbjct: 33 DVDAVFVNAILSGIQLRNLEA-------DRVSLIIEIFNAHAHTKEAKLQAELAALMYAK 85
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
SRLVRVR DGRLTFG G+AEVVSARGRGSGGRGF SGAGETELQLQRRRILERR L
Sbjct: 86 SRLVRVRSSDGRLTFGAFGDAEVVSARGRGSGGRGFTSGAGETELQLQRRRILERRETLR 145
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
+QI++VRRTRA+QRA+R+RH D + LATVAVVGYTNAGKSTLVSALS +DL+SD+RLF
Sbjct: 146 TQIKDVRRTRALQRASRKRHCQLDSQYLATVAVVGYTNAGKSTLVSALSGNDLYSDSRLF 205
Query: 330 ATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 388
ATLD RLKSVVLPSG KVLL DTVGFISDLP+QLV AF ATLEEVVEADLLVH++D TAP
Sbjct: 206 ATLDARLKSVVLPSGRKVLLGDTVGFISDLPVQLVQAFRATLEEVVEADLLVHLMDSTAP 265
Query: 389 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDD--ISNFSRAE 446
NLEEHR TVLQ LQQ+GVSEEKL+NMIEVWNKIDY +E + D DG+D S+ S E
Sbjct: 266 NLEEHRATVLQALQQIGVSEEKLQNMIEVWNKIDYQEEMVADEYLCDGEDGEASSLSGDE 325
Query: 447 DKDTTSEPVDVECIDNYGGDDADNNDGFVSE-DLGESMNKNHNDYSDGWLLSGDEQDNVE 505
D S G DD N SE D E+++ +DYS WLLSGD+Q+ V
Sbjct: 326 GGDVAS-----------GADDEINGFSGRSEGDFEETIDNEQDDYSGDWLLSGDDQEMVG 374
Query: 506 EEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLD 565
+ + ++Q+ E+ D+ ME Q Q QH P +KISA TGVGLQELLE+ID+RLKT D
Sbjct: 375 DHWLKTLDEQRDEALNDLG-MENFLQCQAQHGPHLKISAMTGVGLQELLELIDDRLKTQD 433
Query: 566 DKQKSPNVVERDFFNKKWRPPRTEDSSVA 594
+K K NVVER FFNKKWRPPRTED+ +A
Sbjct: 434 EKFKEQNVVERGFFNKKWRPPRTEDAGIA 462
>gi|414872583|tpg|DAA51140.1| TPA: hypothetical protein ZEAMMB73_713960 [Zea mays]
Length = 558
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 307/560 (54%), Positives = 385/560 (68%), Gaps = 55/560 (9%)
Query: 32 SSSKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSL 91
SS D D+ L + L +RDP+ PPRL +VQPRL+P + L++KL EAL LANSL
Sbjct: 37 SSPTLSPADCDDEGPLRGLFVL-SRDPECPPRLLVVQPRLRPGSLLESKLAEALNLANSL 95
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EE+RDG++ ++F K PPH+VVQNP+ + G++ ADT+FGPGTV+ +KC+++ ES+ ++
Sbjct: 96 EERRDGFYHSEFGAKGAPPHLVVQNPASR-GRSHADTYFGPGTVDNVKCYLSATESEEDV 154
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
DA+FVNAILSGIQQRNLE +ELAALMY K+R
Sbjct: 155 DAVFVNAILSGIQQRNLE------------------------------SELAALMYMKTR 184
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
LVRVRGP GRLTFG +GEAEVVSARGRGSGGRGF+SGAGETELQLQRRRI ERR LL+Q
Sbjct: 185 LVRVRGPGGRLTFGPSGEAEVVSARGRGSGGRGFMSGAGETELQLQRRRIQERRVSLLAQ 244
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
IE+VRRTRA+QR++R+RHGGS G+ L TVAVVGYTNAGKSTLVSALS++DL+SD RLFAT
Sbjct: 245 IEDVRRTRAIQRSSRKRHGGSFGQELVTVAVVGYTNAGKSTLVSALSEADLYSDDRLFAT 304
Query: 332 LDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
+DPRL+SV+LPSG K LLSDTVGFISDLP+QLV+AFHATLEEVVEAD+LVHVLD +A NL
Sbjct: 305 VDPRLRSVILPSGRKALLSDTVGFISDLPVQLVEAFHATLEEVVEADMLVHVLDSSASNL 364
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDG-DDISNFSRAEDKD 449
EEHR+TVLQVLQQ+GVS+EK+ NMIEVWNKID DE + DG DD + E +D
Sbjct: 365 EEHRSTVLQVLQQIGVSQEKINNMIEVWNKIDLVDENVKS----DGIDDEVFLTEGEQED 420
Query: 450 TTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFW 509
D + D D +DG SE L E +++ N+ L + E
Sbjct: 421 DIFSEDDAPS-EQTSFDSVDVDDGADSEYLSEENSEDSNE------LPSKKSFAEPTEMG 473
Query: 510 NAAEDQQPESTKDVCVMEKDSQSQDQHAPD--VKISARTGVGLQELLEIIDERLKTLDDK 567
E E ++ V++ + + Q A VK SA TG GLQELL +I+ +L
Sbjct: 474 AMKELSSKECFGELRVLDTNGHTFPQPASTCHVKTSAVTGTGLQELLALIERKLT----- 528
Query: 568 QKSPNVVERDF--FNKKWRP 585
+ VV+R + F++KWRP
Sbjct: 529 -EQQTVVQRSYGPFDRKWRP 547
>gi|50428705|gb|AAT77056.1| putative GTP-binding protein [Oryza sativa Japonica Group]
Length = 408
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/364 (69%), Positives = 294/364 (80%), Gaps = 7/364 (1%)
Query: 23 PISLHSYSYSSSKRQTKDNKDKDDLHD-----VVTLFNRDPDDPPRLFLVQPRLKPPTFL 77
P L S S KR + D D ++L RDP+ PPRL +VQPRL+P + L
Sbjct: 30 PAPLRSLSTRWGKRSSPTASPPADSDDEGSPRGLSLLPRDPERPPRLLVVQPRLRPGSLL 89
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+KL EAL LANSLEE RDG++ K PPH+V QNPS + G++ D FFGPGTV+
Sbjct: 90 DSKLAEALNLANSLEEPRDGFYKEGLAAKGAPPHLVAQNPSSR-GRSHVDKFFGPGTVDN 148
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+KC++ +ES+ +DA+FVNAIL+GIQQRNLE AWGKPVLDRVGLIIEIFNAHA TKEAK
Sbjct: 149 VKCYLRTSESEEGVDAVFVNAILTGIQQRNLEVAWGKPVLDRVGLIIEIFNAHAETKEAK 208
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ+ELAALMY K+RLVRVRGP GRLTFG +GEAEVVSARGRGSGGRGFISGAGETELQLQ
Sbjct: 209 LQSELAALMYMKTRLVRVRGPGGRLTFGSSGEAEVVSARGRGSGGRGFISGAGETELQLQ 268
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RRRI E R LL+QIE+VRRTRA+QR+ R+RHG S G+ L TVAVVGYTNAGKSTLVSAL
Sbjct: 269 RRRIQECRVRLLAQIEDVRRTRAIQRSNRKRHGNSFGQELVTVAVVGYTNAGKSTLVSAL 328
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
S++DL+SD RLFAT+DPRL+SV+LPSG K LLSDTVGFISDLP+QLV+AFHATLEEVVEA
Sbjct: 329 SETDLYSDDRLFATVDPRLRSVILPSGRKALLSDTVGFISDLPVQLVEAFHATLEEVVEA 388
Query: 377 DLLV 380
D+LV
Sbjct: 389 DMLV 392
>gi|108710872|gb|ABF98667.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 397
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/374 (63%), Positives = 275/374 (73%), Gaps = 38/374 (10%)
Query: 23 PISLHSYSYSSSKRQTKDNKDKDDLHD-----VVTLFNRDPDDPPRLFLVQPRLKPPTFL 77
P L S S KR + D D ++L RDP+ PPRL +VQPRL+P + L
Sbjct: 30 PAPLRSLSTRWGKRSSPTASPPADSDDEGSPRGLSLLPRDPERPPRLLVVQPRLRPGSLL 89
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+KL EAL LANSLEE RDG++ K PPH+V QNPS + G++ D FFGPGTV+
Sbjct: 90 DSKLAEALNLANSLEEPRDGFYKEGLAAKGAPPHLVAQNPSSR-GRSHVDKFFGPGTVDN 148
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+KC++ +ES E AWGKPVLDRVGLIIEIFNAHA TKEAK
Sbjct: 149 VKCYLRTSES---------------------EVAWGKPVLDRVGLIIEIFNAHAETKEAK 187
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ+ELAALMY K+RLVRVRGP GRLTFG +GEAEVVSARGRGSGGRGFISGAGETELQLQ
Sbjct: 188 LQSELAALMYMKTRLVRVRGPGGRLTFGSSGEAEVVSARGRGSGGRGFISGAGETELQLQ 247
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RRRI E R LL+QIE+VRRTRA+QR+ R+RHG S G+ L TVAVVGYTNAGKSTLVSAL
Sbjct: 248 RRRIQECRVRLLAQIEDVRRTRAIQRSNRKRHGNSFGQELVTVAVVGYTNAGKSTLVSAL 307
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSG-----------KVLLSDTVGFISDLPLQLVDAF 366
S++DL+SD RLFAT+DPRL+SV+LPSG K LLSDTVGFISDLP+QLV+AF
Sbjct: 308 SETDLYSDDRLFATVDPRLRSVILPSGYLNRFFIHLLRKALLSDTVGFISDLPVQLVEAF 367
Query: 367 HATLEEVVEADLLV 380
HATLEEVVEAD+LV
Sbjct: 368 HATLEEVVEADMLV 381
>gi|414872582|tpg|DAA51139.1| TPA: hypothetical protein ZEAMMB73_713960 [Zea mays]
Length = 369
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/350 (64%), Positives = 275/350 (78%), Gaps = 33/350 (9%)
Query: 32 SSSKRQTKDNKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSL 91
SS D D+ L + L +RDP+ PPRL +VQPRL+P + L++KL EAL LANSL
Sbjct: 37 SSPTLSPADCDDEGPLRGLFVL-SRDPECPPRLLVVQPRLRPGSLLESKLAEALNLANSL 95
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EE+RDG++ ++F K PPH+VVQNP+ + G++ ADT+FGPGTV+ +KC+++ ES+ ++
Sbjct: 96 EERRDGFYHSEFGAKGAPPHLVVQNPASR-GRSHADTYFGPGTVDNVKCYLSATESEEDV 154
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
DA+FVNAILSGIQQRNLE +ELAALMY K+R
Sbjct: 155 DAVFVNAILSGIQQRNLE------------------------------SELAALMYMKTR 184
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
LVRVRGP GRLTFG +GEAEVVSARGRGSGGRGF+SGAGETELQLQRRRI ERR LL+Q
Sbjct: 185 LVRVRGPGGRLTFGPSGEAEVVSARGRGSGGRGFMSGAGETELQLQRRRIQERRVSLLAQ 244
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
IE+VRRTRA+QR++R+RHGGS G+ L TVAVVGYTNAGKSTLVSALS++DL+SD RLFAT
Sbjct: 245 IEDVRRTRAIQRSSRKRHGGSFGQELVTVAVVGYTNAGKSTLVSALSEADLYSDDRLFAT 304
Query: 332 LDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLV 380
+DPRL+SV+LPSG K LLSDTVGFISDLP+QLV+AFHATLEEVVEAD+LV
Sbjct: 305 VDPRLRSVILPSGRKALLSDTVGFISDLPVQLVEAFHATLEEVVEADMLV 354
>gi|125587011|gb|EAZ27675.1| hypothetical protein OsJ_11621 [Oryza sativa Japonica Group]
Length = 367
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/356 (61%), Positives = 256/356 (71%), Gaps = 38/356 (10%)
Query: 23 PISLHSYSYSSSKRQTKDNKDKDDLHD-----VVTLFNRDPDDPPRLFLVQPRLKPPTFL 77
P L S S KR + D D ++L RDP+ PPRL +VQP L+P + L
Sbjct: 30 PAPLRSLSTRWGKRSSPTASPPADSDDEGSPRGLSLLPRDPERPPRLLVVQPSLRPGSLL 89
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+KL EAL LANSLEE RDG++ K PPH+V QNPS + G++ D FFGPGTV+
Sbjct: 90 DSKLAEALNLANSLEEPRDGFYKEGLAAKGAPPHLVAQNPSSR-GRSHVDKFFGPGTVDN 148
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+KC++ +ES E AWGKPVLDRVGLIIEIFNAHA TKEAK
Sbjct: 149 VKCYLRTSES---------------------EVAWGKPVLDRVGLIIEIFNAHAETKEAK 187
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ+ELAALMY K+RLVRVRGP GRLTFG +GEAEVVSARGRGSGGRGFISGAGETELQLQ
Sbjct: 188 LQSELAALMYMKTRLVRVRGPGGRLTFGSSGEAEVVSARGRGSGGRGFISGAGETELQLQ 247
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RRRI E R LL+QIE+VRRTRA+QR+ R+RHG S G+ L TVAVVGYTNAGKSTLVSAL
Sbjct: 248 RRRIQECRVRLLAQIEDVRRTRAIQRSNRKRHGNSFGQELVTVAVVGYTNAGKSTLVSAL 307
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSG-----------KVLLSDTVGFISDLPLQL 362
S++DL+SD RLFAT+DPRL+SV+LPSG K LLSDTVGFISDLP+Q+
Sbjct: 308 SETDLYSDDRLFATVDPRLRSVILPSGYLNRFFIHLLRKALLSDTVGFISDLPVQV 363
>gi|218193248|gb|EEC75675.1| hypothetical protein OsI_12475 [Oryza sativa Indica Group]
Length = 323
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 207/300 (69%), Positives = 240/300 (80%), Gaps = 23/300 (7%)
Query: 64 LFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGK 123
L +VQPRL+P + L +KL EAL LANSLEE RDG++ K PPH+VVQNPS + G+
Sbjct: 42 LLVVQPRLRPGSLLDSKLAEALNLANSLEEPRDGFYKEGLAAKGAPPHLVVQNPSSR-GR 100
Query: 124 ARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
+ D FFGPGTV+ +KC++ +ES E AWGKPVLDRVGLI
Sbjct: 101 SHVDKFFGPGTVDNVKCYLRTSES---------------------EVAWGKPVLDRVGLI 139
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
IEIFNAHA TKEAKLQ+ELAALMY K+RL+RVRGP GRLTFG +GEAEVVSARGRGSGGR
Sbjct: 140 IEIFNAHAETKEAKLQSELAALMYMKTRLIRVRGPGGRLTFGSSGEAEVVSARGRGSGGR 199
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
GFISGAGETELQLQRRRI ERR LL+QIE+VRRTRA+QR+ R+RHG S G+ L TVAVV
Sbjct: 200 GFISGAGETELQLQRRRIQERRVRLLAQIEDVRRTRAIQRSNRKRHGNSFGQELVTVAVV 259
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQL 362
GYTNAGKSTLVSALS++DL+SD RLFAT+DPRL+SV+LPSG K LLSDTVGFISDLP+Q+
Sbjct: 260 GYTNAGKSTLVSALSETDLYSDDRLFATVDPRLRSVILPSGRKALLSDTVGFISDLPVQV 319
>gi|242033107|ref|XP_002463948.1| hypothetical protein SORBIDRAFT_01g009434 [Sorghum bicolor]
gi|241917802|gb|EER90946.1| hypothetical protein SORBIDRAFT_01g009434 [Sorghum bicolor]
Length = 263
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/244 (67%), Positives = 196/244 (80%), Gaps = 7/244 (2%)
Query: 23 PIS--LHSYSYSSSKRQ--TKDNKDKDDLHDVVTLF--NRDPDDPPRLFLVQPRLKPPTF 76
P+S L + S KR T D DD + LF +RDP+ PPRL +VQPRL+P +
Sbjct: 21 PVSPYLRALSTRRGKRSSPTVSPADSDDEGPLRGLFVLSRDPECPPRLLVVQPRLRPGSL 80
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVE 136
L +KL EAL LANSLEE RDG++ ++F K PPH+VVQNP+ + G++ ADT+FGPGTV+
Sbjct: 81 LDSKLAEALNLANSLEEPRDGFYHSEFGAKGAPPHLVVQNPASR-GRSHADTYFGPGTVD 139
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
+KC++ +ES+ ++DA+FVNAILSGIQQRNLE AWGKPVLDRVGLIIEIFNAHA TKEA
Sbjct: 140 NVKCYLRASESEEDVDAVFVNAILSGIQQRNLEVAWGKPVLDRVGLIIEIFNAHAETKEA 199
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ+ELAALMY K+RLVRVRGP GRLTFG +GEAEVVSARGRGSGGRGF+SGAGETELQL
Sbjct: 200 KLQSELAALMYMKTRLVRVRGPGGRLTFGPSGEAEVVSARGRGSGGRGFMSGAGETELQL 259
Query: 257 QRRR 260
QRRR
Sbjct: 260 QRRR 263
>gi|307104847|gb|EFN53099.1| hypothetical protein CHLNCDRAFT_137429 [Chlorella variabilis]
Length = 609
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 187/356 (52%), Positives = 233/356 (65%), Gaps = 39/356 (10%)
Query: 81 LNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKC 140
L EA LA SLE Y + P +PS TFFG G VE ++
Sbjct: 11 LLEACKLAESLEGTAPEYVQVGSASRLRP------SPS---------TFFGRGQVEAVQA 55
Query: 141 HINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQA 200
+ + +FVN +LSG+QQRNLERA +PVLDRV LIIEIF+ A T EA+LQ
Sbjct: 56 RVAATQP----HRVFVNHVLSGVQQRNLERALQRPVLDRVALIIEIFSQRARTAEARLQV 111
Query: 201 ELAALMYKKSRLVRV--RGPDGRLTFGETGEA-EVVSAR-----GRGSGGRGFISGAGET 252
ELA+L YK SRLVRV R FG GEA E+VSAR G G+GG G G GE+
Sbjct: 112 ELASLEYKASRLVRVVDAATGKRAAFGLAGEASEIVSARERGRSGSGAGGLGGAGGQGES 171
Query: 253 ELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKST 312
ELQLQRRR+ +RR LL ++EEVR+TR VQRAARRR G VA+VGYTNAGKS+
Sbjct: 172 ELQLQRRRVADRRKQLLRKLEEVRKTRGVQRAARRRSGKPQ------VAIVGYTNAGKSS 225
Query: 313 LVSALS---DSDLFSDARLFATLDPRLKSVVLP-SGK-VLLSDTVGFISDLPLQLVDAFH 367
L+SALS +++ + +LFATLDP L+ V+LP SG+ V+LSDTVGFISDLP QL++AF
Sbjct: 226 LLSALSKCGEAEAGVEDKLFATLDPTLRRVMLPGSGRDVVLSDTVGFISDLPTQLIEAFQ 285
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK-NMIEVWNKID 422
ATLEEV EADLL+HVLD ++P + + R VL VL+ +GV E +L+ +IEVWNK+D
Sbjct: 286 ATLEEVTEADLLLHVLDASSPQVLQQRAAVLGVLRGLGVPEARLREGVIEVWNKMD 341
>gi|302771868|ref|XP_002969352.1| hypothetical protein SELMODRAFT_91633 [Selaginella moellendorffii]
gi|300162828|gb|EFJ29440.1| hypothetical protein SELMODRAFT_91633 [Selaginella moellendorffii]
Length = 334
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/321 (55%), Positives = 227/321 (70%), Gaps = 22/321 (6%)
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
+LF+VQPR PP L+AKL EAL LANSL +DF P +V+VQ
Sbjct: 28 KLFVVQPRFHPPLLLKAKLLEALRLANSLAPLTATDLKSDF-----PSYVLVQGRR---- 78
Query: 123 KARADTFFGPGTVETIKCHINGAESKG-ELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
K A T+FG GT++ I+ H+N + + E+DA+FVN LSG+QQRNLE AW +PVLDRVG
Sbjct: 79 KINAGTYFGAGTIDNIRTHLNVIDVEDREIDAVFVNTSLSGVQQRNLEDAWERPVLDRVG 138
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVV-SARGRGS 240
LIIEIF + A +KEAKLQ ELAAL +K++RL+R +G R FG GE EVV + G
Sbjct: 139 LIIEIFGSRARSKEAKLQVELAALDFKRTRLIREKGE--RKAFGAGGEQEVVSARGASGG 196
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GGRGF SG+GE+ELQLQRRRI +++ + + + ++TR++ R R G+ V
Sbjct: 197 GGRGFTSGSGESELQLQRRRISDQKHKIQVALAKAKQTRSLHRRNR--------EGIPLV 248
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLP 359
AVVGYTNAGKSTLV ALS S L+SD RLFATLD +++SV+LPSG +VL+SDTVGFISDLP
Sbjct: 249 AVVGYTNAGKSTLVGALSKSSLYSDDRLFATLDTQVRSVILPSGRRVLVSDTVGFISDLP 308
Query: 360 LQLVDAFHATLEEVVEADLLV 380
QLV+AFHATLEEVV AD+++
Sbjct: 309 TQLVEAFHATLEEVVAADIVL 329
>gi|384249127|gb|EIE22609.1| hypothetical protein COCSUDRAFT_63755 [Coccomyxa subellipsoidea
C-169]
Length = 706
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 190/399 (47%), Positives = 234/399 (58%), Gaps = 54/399 (13%)
Query: 49 DVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKEL 108
D++TL D +V PR +PP ++Q EA+ LA S Y
Sbjct: 10 DLITLRGFASDPCRSCVMVHPRAQPPPYVQ----EAMRLAES-------YAGAHC----- 53
Query: 109 PPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNL 168
+ PS S A FFG G VE++K + + +FVN +LSG+QQRNL
Sbjct: 54 --KSIAVGPSRGSPPTSA-AFFGSGAVESLKGQLAALDPH----TVFVNCMLSGVQQRNL 106
Query: 169 ERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVR-VRGPDG-RLTFGE 226
E AW +PV DRVGLII+IF A T+EA+LQ E+A+L YK SRLVR V G R FGE
Sbjct: 107 EAAWQRPVTDRVGLIIKIFAQRARTREARLQVEMASLDYKVSRLVRSVDAATGQRAGFGE 166
Query: 227 TGEAEVVSARGR-----GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAV 281
G EVVSAR R SGG G +G GETELQLQRRRI R L Q+ EVR+TR
Sbjct: 167 GGLTEVVSARERGRSGGTSGGLGGSAGGGETELQLQRRRIRARIKALKRQLAEVRQTRVT 226
Query: 282 QRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL 341
QRA R R G AVVGYTNAGKS+LVSALS D+ RLF TLDP ++ V+L
Sbjct: 227 QRAGRLRAGKP------VCAVVGYTNAGKSSLVSALSGDDVGVQDRLFETLDPTMRQVML 280
Query: 342 PSGK-VLLSDTVGFISDLPLQLVDAFH----------------ATLEEVVEADLLVHVLD 384
PSG+ +LSDTVGFISDLP L+ AF ATLEEVVEADLL+HV+D
Sbjct: 281 PSGRGAILSDTVGFISDLPPSLIKAFQASNLTLYNIRILCPVLATLEEVVEADLLLHVMD 340
Query: 385 CTAPNLEEHRTTVLQVLQQVGVSEEKL-KNMIEVWNKID 422
++ + + R VL VL+++GVSE +L K++IEV NK D
Sbjct: 341 GSSEQMLQQRDAVLAVLRRLGVSEMRLQKSLIEVVNKSD 379
>gi|407775001|ref|ZP_11122297.1| GTPase [Thalassospira profundimaris WP0211]
gi|407281949|gb|EKF07509.1| GTPase [Thalassospira profundimaris WP0211]
Length = 392
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 215/377 (57%), Gaps = 48/377 (12%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
K R T FG G E + I E+ D + +N LS IQQRNLER W V+DR G
Sbjct: 9 AKLRPSTLFGKGVTERLGLQIKAIEA----DIVMINGQLSPIQQRNLEREWKCKVIDRTG 64
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A T+E +LQ +LA L Y++SRLVR T E R G
Sbjct: 65 LILEIFADRARTREGRLQVQLALLSYQRSRLVRT------WTHLE-----------RQRG 107
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
GRGF++G GE ++++ RR I ++ + L ++EEV+RTR + R ARRR VA
Sbjct: 108 GRGFLAGPGERQIEIDRRLIGDKLAKLRRELEEVKRTRELHREARRRVP------YPIVA 161
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPL 360
+VGYTNAGKSTL + L+ S++F++ LFATLDP ++ ++LPSG KV+LSDTVGF+SDLP
Sbjct: 162 LVGYTNAGKSTLFNQLTVSEVFAEDMLFATLDPTMRGLILPSGRKVILSDTVGFVSDLPH 221
Query: 361 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE-KLKNMIEVWN 419
LV AF ATLEEV+EADL+VHV D +P EE + VL+VL+++G+ + + ++E N
Sbjct: 222 DLVAAFRATLEEVLEADLIVHVRDVASPETEEQKLDVLEVLKELGLQKAIDGEELVEALN 281
Query: 420 KID-YHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSED 478
KID EE+ +S +S D I G + D G + +
Sbjct: 282 KIDQLKGEEL--------QAVSEYSARHDNTI--------AISAIKGTNCDALLGLIEDR 325
Query: 479 LGESMN--KNHNDYSDG 493
L E M + YSDG
Sbjct: 326 LTEDMPVFELCVPYSDG 342
>gi|407769132|ref|ZP_11116509.1| GTPase [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288052|gb|EKF13531.1| GTPase [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 459
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 170/449 (37%), Positives = 239/449 (53%), Gaps = 70/449 (15%)
Query: 59 DDPPRLFLVQPRLKPPTFL------QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHV 112
DD PR+ + P LK ++L EA+ L G D + E+ P
Sbjct: 25 DDSPRVLVFHPELKRADQAGSWRDASSRLEEAVSLT--------GALDFEVVGAEVVP-- 74
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
K R T FG G VE + I E+ D + +N LS IQQRNLER W
Sbjct: 75 --------IAKTRPATLFGTGVVERLGNQIKAEEA----DIVMINGQLSPIQQRNLEREW 122
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T+E +LQ +LA L Y+KSRLVR T E
Sbjct: 123 KCKVIDRTGLILEIFADRARTREGRLQVQLALLSYQKSRLVRT------WTHLE------ 170
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GGRGF++G GE ++++ RR I ++ + L ++EEV+RTR + R ARRR
Sbjct: 171 -----RQRGGRGFLAGPGERQIEIDRRLIGDKLAKLRRELEEVKRTRELHREARRRV--- 222
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
VA+VGYTNAGKSTL + L+ SD+F++ LFATLDP ++ + LPSG KV+LSDT
Sbjct: 223 ---PYPIVALVGYTNAGKSTLFNQLTVSDVFAEDMLFATLDPTMRGLELPSGRKVILSDT 279
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE-K 410
VGF+SDLP LV AF ATLEEV+EADL+VHV D ++ E + VL+VL+ +G+ +
Sbjct: 280 VGFVSDLPHDLVAAFRATLEEVLEADLIVHVRDASSHEAEAQKLDVLEVLKALGLQKAID 339
Query: 411 LKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN 470
+ ++E NK D ++G+D++ ++ ++ + I G + D
Sbjct: 340 GEELVEALNKCD----------QLEGEDLTAV-----QEYSARNANTIAISAIKGTNCDA 384
Query: 471 NDGFVSEDLGESMN--KNHNDYSDGWLLS 497
+ + L E M + YSDG L+
Sbjct: 385 LLALIEDRLTEDMPVFELLVPYSDGKALA 413
>gi|302774533|ref|XP_002970683.1| hypothetical protein SELMODRAFT_441252 [Selaginella moellendorffii]
gi|300161394|gb|EFJ28009.1| hypothetical protein SELMODRAFT_441252 [Selaginella moellendorffii]
Length = 2376
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 182/441 (41%), Positives = 243/441 (55%), Gaps = 76/441 (17%)
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
+LF+VQPR PP L+AKL EAL LANSL +DF P +V+VQ
Sbjct: 28 KLFVVQPRFHPPLLLKAKLLEALRLANSLAPLTATDLKSDF-----PSYVLVQGRR---- 78
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K A T+FG GT++ I+ H LD I ++E AW +PVLDRVGL
Sbjct: 79 KINAGTYFGAGTIDNIRTH---------LDVI------------DVEDAWERPVLDRVGL 117
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
IIEIF + A +KEAKLQ ELAAL +K++RL+R +G R FG GE EV S S
Sbjct: 118 IIEIFGSRARSKEAKLQVELAALDFKRTRLIREKGE--RKAFGAGGEQEVESKWWWWSRI 175
Query: 243 RGFISGAGETELQLQ-RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
I G + RI +++ + + + ++TR++ R R G+ VA
Sbjct: 176 YERIRRVGIAATTTEFSTRISDQKHKIQLALAKAKQTRSLHRRNR--------EGIPLVA 227
Query: 302 VVGY----------TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSD 350
V Y T GKSTLV ALS S L+SD RLFATLD +++SV+LPSG +VL+SD
Sbjct: 228 VSCYALIAEKQDSSTLQGKSTLVGALSKSSLYSDDRLFATLDTQVRSVILPSGRRVLVSD 287
Query: 351 TVGFISDLPLQ-------------------LVDAFHATLEEVVEADLLVHVLDCTAPNLE 391
TVGFISDLP Q LV+AFHATLEEVV AD+++HV+D +APN++
Sbjct: 288 TVGFISDLPTQVCEDSQALNIYLCLREFWKLVEAFHATLEEVVAADIVLHVMDSSAPNMD 347
Query: 392 EHRTTVLQVLQQVGVSEEKL-KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDT 450
E R VL+VL ++GVS++ L + IEV NKID H + GD++ G + + D+D
Sbjct: 348 EQREAVLKVLGEIGVSQQDLDEKTIEVMNKIDVH-PDCGDLDLPAGLLLCD---GNDEDA 403
Query: 451 TSEPVDVECIDNYGGDDADNN 471
P E G +A +N
Sbjct: 404 LVIPSSEEYRKAVGAANALSN 424
>gi|114569999|ref|YP_756679.1| small GTP-binding protein [Maricaulis maris MCS10]
gi|114340461|gb|ABI65741.1| GTP-binding protein HflX [Maricaulis maris MCS10]
Length = 450
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 204/353 (57%), Gaps = 50/353 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA LA +L D E+ ++Q + SG+ +FG G ++
Sbjct: 26 EARLEEAYGLAEAL-------------DLEVGAAFILQTRKIDSGR-----YFGRGKLDE 67
Query: 138 IKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
+ I GEL+A ++ LS IQQRNLE AW V+DR GLI+EIF A TKE
Sbjct: 68 LGAMI------GELEANVAVIDTNLSPIQQRNLENAWNVKVIDRTGLILEIFGQRARTKE 121
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
LQ ELA L Y++SRLVR T E R GGRGF++G GET+++
Sbjct: 122 GVLQVELARLAYERSRLVRT------WTHLE-----------RQRGGRGFLAGPGETQIE 164
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + L Q++EVRRTRA+ R+ R+ TVA+VGYTNAGKSTL +
Sbjct: 165 TDRRLLNEKMAKLRRQLDEVRRTRALHRSQRQ------DVPFPTVALVGYTNAGKSTLFN 218
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVV 374
L+ + +F+ FATLDP +++V LP G ++LLSDTVGFI+DLP +L+ AF ATLEEV
Sbjct: 219 KLTGAGVFAQDMPFATLDPTVRAVDLPGGTRILLSDTVGFITDLPTELIAAFRATLEEVR 278
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
EADLLVH++D + P+ E V VL + + M+E WNK D D+E
Sbjct: 279 EADLLVHIIDASDPDREGRIQDVESVLDAIEAGPAHDQAMLEAWNKSDRLDDE 331
>gi|114771148|ref|ZP_01448588.1| GTP-binding protein HflX [Rhodobacterales bacterium HTCC2255]
gi|114548430|gb|EAU51316.1| GTP-binding protein HflX [alpha proteobacterium HTCC2255]
Length = 417
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 213/373 (57%), Gaps = 52/373 (13%)
Query: 81 LNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKC 140
L EA+ LAN+L D + + + P LK K A T FG G +
Sbjct: 23 LEEAVSLANAL--------DIEILHEAVIP--------LK--KPNAGTLFGSGKL----L 60
Query: 141 HINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQA 200
++ ++D + ++ L+ IQQRNLE+ W VLDR GLI+EIF A T+E LQ
Sbjct: 61 ELSQIFKSNDIDLVIIDGPLTPIQQRNLEKEWNLKVLDRTGLILEIFGDRAQTREGVLQV 120
Query: 201 ELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRR 260
+LAAL Y++SRLVR + R GG FI GAGET+++ RR+
Sbjct: 121 DLAALNYQRSRLVRTW-----------------THLERQRGGLSFIGGAGETQIESDRRQ 163
Query: 261 ILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDS 320
I + L Q+E+V +TR + R+AR++ VA+VGYTNAGKSTL + ++ +
Sbjct: 164 IDDAILRLKKQLEKVVKTRELHRSARKKIP------YPIVALVGYTNAGKSTLFNYMTGA 217
Query: 321 DLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLL 379
+F+ LFATLDP ++ V LPSG K++LSDTVGFIS+LP QL+ AF ATLEEV++A+L+
Sbjct: 218 KVFAKDMLFATLDPTMREVELPSGQKIILSDTVGFISELPTQLIAAFRATLEEVLDANLI 277
Query: 380 VHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDI 439
+HV D + P E V +L+++ VS+ N++EVWNK D + + E I+ +I
Sbjct: 278 LHVRDISHPETEAQANDVNDILEELDVSDNTKSNILEVWNKTDL----LSNDELINAKNI 333
Query: 440 SNFSRAEDKDTTS 452
S+ R+E T S
Sbjct: 334 SD--RSEKIRTVS 344
>gi|427431603|ref|ZP_18920946.1| GTP-binding protein HflX [Caenispirillum salinarum AK4]
gi|425877751|gb|EKV26482.1| GTP-binding protein HflX [Caenispirillum salinarum AK4]
Length = 433
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 214/374 (57%), Gaps = 46/374 (12%)
Query: 60 DPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSL 119
DP R +V P +K + ++A LEE + D +V +
Sbjct: 10 DPARCLVVHPAIKQ----RGTNDDARDPTERLEEAKGLALAIDLN--------IVHGEVV 57
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K R TF G G VE ++ I E++ + ++ LS +QQRNLER W V+DR
Sbjct: 58 TLNKPRPATFLGEGQVERLQSIIED----NEVEVVVMDCHLSPVQQRNLERNWKTKVIDR 113
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
GLI+EIF A T+E +LQ ELA L Y++SRLVR T E R
Sbjct: 114 TGLILEIFGERARTREGQLQVELAHLSYQRSRLVR------SWTHLE-----------RQ 156
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG GF+ G GET++++ RR I ER + L ++EEV+RTR + R ARRR
Sbjct: 157 RGGAGFMGGPGETQIEIDRRLISERITRLKKELEEVKRTRNLHREARRR------VPYPI 210
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
VA+VGYTNAGKSTL + L+ S++++ +LFATLDP ++ +VLPSGK V+LSDTVGF+SDL
Sbjct: 211 VALVGYTNAGKSTLFNRLTKSEVYAQDQLFATLDPTMRGLVLPSGKQVILSDTVGFVSDL 270
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ-QVGVSEEKLKNMIEV 417
P +LV AFHATLEEV+EAD++VHV D +P+ + V VL+ ++ + EE ++E
Sbjct: 271 PHELVAAFHATLEEVLEADVIVHVRDAHSPDTAAQKADVEHVLRVELNLGEEVDAGLLEA 330
Query: 418 WNKIDY-----HDE 426
NKID HDE
Sbjct: 331 MNKIDLLAPEAHDE 344
>gi|83858322|ref|ZP_00951844.1| GTP-binding protein HflX [Oceanicaulis sp. HTCC2633]
gi|83853145|gb|EAP90997.1| GTP-binding protein HflX [Oceanicaulis sp. HTCC2633]
Length = 443
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 200/346 (57%), Gaps = 46/346 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
QA+L EA+ LA +L D + + P V+ A FFG G +
Sbjct: 27 QARLEEAIGLAQAL--------DLVTAEARIEPLRRVE----------ASGFFGTGKIAQ 68
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + AE + + ++A LS IQQRNLE+ V+DR GLI+EIF A T+E +
Sbjct: 69 IAERVKDAE----ITVVIIDAALSPIQQRNLEKKLNAKVIDRTGLILEIFGLRAQTREGR 124
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GGRGF++G GET+++
Sbjct: 125 LQVELARLAYERSRLVRT------WTHLE-----------RQRGGRGFLAGPGETQIETD 167
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR + ++ + L +++EV+RTR++ R R+ TVA+VGYTNAGKSTL + L
Sbjct: 168 RRILADKMAKLRRELDEVKRTRSLHRKKRQTAP------WPTVALVGYTNAGKSTLFNLL 221
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
SD+ + + FATLDP ++ V LPSG+ VL+SDTVGFI+DLP +L+ AF ATLEEV+EA
Sbjct: 222 SDAQVLAKDMPFATLDPTVRGVKLPSGRRVLMSDTVGFITDLPTELIAAFRATLEEVIEA 281
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
D+L+HV D P+ E + V VL +G E +++IE WNK D
Sbjct: 282 DVLIHVRDMADPDHEGRKADVESVLAALGAGAEADQHVIEAWNKAD 327
>gi|298291760|ref|YP_003693699.1| GTP-binding proten HflX [Starkeya novella DSM 506]
gi|296928271|gb|ADH89080.1| GTP-binding proten HflX [Starkeya novella DSM 506]
Length = 463
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 201/343 (58%), Gaps = 37/343 (10%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I + E+ +FV+A L+ +QQRNLE+AW V+DR LI+
Sbjct: 80 RPATYLGTGKVEEIAGVVKAEEA----GLVFVDAPLTPVQQRNLEKAWSAKVIDRTALIL 135
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y++SRLVR T E R GG G
Sbjct: 136 EIFGQRARTKEGVLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 178
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER + ++E+V+RTRA+ RA+R++ VA+VG
Sbjct: 179 FLGGPGETQIEADRRLIGERILKIERELEQVKRTRALHRASRKKVP------YPVVALVG 232
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ SD+ + LFATLDP L++V LPSG +++LSDTVGFISDLP QLV
Sbjct: 233 YTNAGKSTLFNRLTRSDVMAQDLLFATLDPTLRAVQLPSGERIILSDTVGFISDLPTQLV 292
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EADL++HV D + + E V VL + + E +IEVWNKID
Sbjct: 293 AAFRATLEEVIEADLILHVRDMSHEDAEAQAHDVEAVLSDLDIDPEDDHRVIEVWNKIDR 352
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 466
DEE G F+ AE ++ + P+ V + G D
Sbjct: 353 LDEE-GRARL--------FNTAERREGDARPIPVSALTGEGVD 386
>gi|46202523|ref|ZP_00053076.2| COG2262: GTPases [Magnetospirillum magnetotacticum MS-1]
Length = 421
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 208/353 (58%), Gaps = 50/353 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA G D D +V ++ K R T G G VE
Sbjct: 17 EARLAEAVGLA--------GAIDLD----------IVAAEAVNVAKLRPATLMGKGAVER 58
Query: 138 IKCHINGAESKGELDAIF--VNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
+ AE E D V+ LS +QQRNLE+AWG V+DR GLI+EIF A A T+E
Sbjct: 59 L------AELVEERDVALAVVDCHLSPVQQRNLEKAWGCKVIDRTGLILEIFGARARTRE 112
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
LQ ELAAL Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 113 GTLQVELAALSYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIE 155
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR I ER L ++E+V+RTR + R ARR+ VA+VGYTNAGKSTL +
Sbjct: 156 ADRRMIGERIVKLERELEDVKRTRDLHRKARRKVP------YPIVALVGYTNAGKSTLFN 209
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVV 374
L+ +++ + LFATLDP ++++VLPSG K++LSDTVGFISDLP +LV AF ATLEEV+
Sbjct: 210 QLTRAEVLAKDMLFATLDPTMRTLVLPSGRKIILSDTVGFISDLPHELVAAFRATLEEVL 269
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
EAD++VHV D + P+ E V VL+++G++E + ++E NKID DEE
Sbjct: 270 EADIVVHVRDISHPDTEAQSADVDTVLKELGLAEVVDRGLVEALNKIDLLDEE 322
>gi|365897580|ref|ZP_09435576.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. STM 3843]
gi|365421672|emb|CCE08118.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. STM 3843]
Length = 461
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 142/306 (46%), Positives = 189/306 (61%), Gaps = 24/306 (7%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
G+ R T+ G G V+ I I G ++ + ++ LS IQQRNLE+AW VLDR G
Sbjct: 75 GQIRPATYLGKGKVDEIAGLIAGQLPGHGIELVVMDCALSPIQQRNLEKAWNTKVLDRTG 134
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A TKE LQ ELA L Y++SRLVR T E R G
Sbjct: 135 LILEIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRG 177
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G GF+ G GET+++ RR I ER S L +++++V+ TR + RA R+R VA
Sbjct: 178 GFGFMGGPGETQIEADRRLISERISRLENELKKVQATRRLHRAGRQR------VPYRVVA 231
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPL 360
+VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP
Sbjct: 232 LVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPT 291
Query: 361 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 420
QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E N+IEVWNK
Sbjct: 292 QLVAAFRATLEEVLEADVILHVRDISHEDAEAQQQDVEMVLSQLGIDPEASDNIIEVWNK 351
Query: 421 IDYHDE 426
+D D+
Sbjct: 352 VDCLDD 357
>gi|374294463|ref|YP_005041488.1| putative GTP-binding protein (HflX-like) [Azospirillum lipoferum
4B]
gi|357428461|emb|CBS91419.1| Putative GTP-binding protein (HflX-like) [Azospirillum lipoferum
4B]
Length = 448
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 203/350 (58%), Gaps = 43/350 (12%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A L EA+ LA ++E + V Q +K + R T G G +E
Sbjct: 39 EASLEEAVGLAAAIELE------------------VAQAAVVKVNQPRPATLLGGGAIEQ 80
Query: 138 IKCHINGAESKGE-LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
++ A GE +D + V+ L+ +QQRNLE+A+G V+DR GLI+EIF A A T E
Sbjct: 81 YAKLLDDAREAGEDIDLVIVDHALTPVQQRNLEKAFGTKVIDRTGLILEIFGARARTHEG 140
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
+LQ ELA+L Y+KSRLVR T E R GG GF+ G GE++L++
Sbjct: 141 QLQVELASLTYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGESQLEI 183
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I R + ++++VRRTR + R AR + VA+VGYTNAGKSTL +
Sbjct: 184 DRRLIGNRIVKIKRELDDVRRTRGLHRKARAK------VPYPVVALVGYTNAGKSTLFNR 237
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVE 375
++ +D+F+ LFATLDP ++ VVLPSG KV+LSDTVGFISDLP LV AF ATLEEV
Sbjct: 238 MAGADVFAKNLLFATLDPTMRQVVLPSGRKVILSDTVGFISDLPTHLVAAFRATLEEVQS 297
Query: 376 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
AD+++HV D P+ E + V +L +G+ E+ ++EV NKID D
Sbjct: 298 ADIILHVRDIAHPDTEAQKADVEAILTDLGIDPERDPRVVEVSNKIDLLD 347
>gi|83311472|ref|YP_421736.1| GTPase [Magnetospirillum magneticum AMB-1]
gi|82946313|dbj|BAE51177.1| GTPase [Magnetospirillum magneticum AMB-1]
Length = 435
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 159/373 (42%), Positives = 213/373 (57%), Gaps = 53/373 (14%)
Query: 61 PPRLFLVQPRLKPP---TFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R +V P K +A+L EA+ LA G + D +V
Sbjct: 11 PSRAMVVHPAFKGGEGNRLPEARLAEAVGLA--------GAINLD----------IVAAE 52
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIF--VNAILSGIQQRNLERAWGKP 175
++ K R T G G VE + AE E D V+ L+ +QQRNLE+AWG
Sbjct: 53 AVNVSKVRPATLIGKGAVERL------AELVEERDIALAVVDGHLTPVQQRNLEKAWGCK 106
Query: 176 VLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSA 235
V+DR GLI+EIF A A T+E LQ ELAAL Y++SRLVR T E
Sbjct: 107 VIDRTGLILEIFGARARTREGTLQVELAALSYQRSRLVR------SWTHLE--------- 151
Query: 236 RGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGR 295
R GG GF+ G GET+++ RR I ER L ++E+V+RTR + R ARRR
Sbjct: 152 --RQRGGFGFLGGPGETQIEADRRMIGERIVKLERELEDVKRTRDLHRKARRRVP----- 204
Query: 296 GLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGF 354
VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ +VLPSG K++LSDTVGF
Sbjct: 205 -YPIVALVGYTNAGKSTLFNQLTRAEVLAKDMLFATLDPTMRDLVLPSGRKIILSDTVGF 263
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
ISDLP +LV AF ATLEEV+EAD++VHV D + P+ E V VL+++G++E + +
Sbjct: 264 ISDLPHELVAAFRATLEEVLEADVVVHVRDVSHPDTEAQAADVDTVLKELGLAEVVDRGL 323
Query: 415 IEVWNKIDYHDEE 427
+E NKID D+E
Sbjct: 324 VEALNKIDLLDDE 336
>gi|294677339|ref|YP_003577954.1| GTP-binding proten HflX [Rhodobacter capsulatus SB 1003]
gi|294476159|gb|ADE85547.1| GTP-binding proten HflX [Rhodobacter capsulatus SB 1003]
Length = 427
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 218/375 (58%), Gaps = 56/375 (14%)
Query: 59 DDPPRLFLVQPRLKP------PTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHV 112
D P R++++ P LK P +L EA+ LA +L D ++ H
Sbjct: 9 DRPTRVWVLHPDLKAVDARREPEL---RLAEAVSLAAALP------------DLQIMGHE 53
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V+ P K A FG G + +K + AE +D + V+ +S IQQRNLE+ W
Sbjct: 54 IVRLP-----KPHAGHLFGTGKMAELKERLQAAE----VDLVLVDGPVSPIQQRNLEKEW 104
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G +LDR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 105 GVKLLDRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTHLE------ 152
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ++ L Q+ +V +TR + RAARR+
Sbjct: 153 -----RQRGGFGFVGGPGETQIEADRRAIDDQVIRLKRQLAKVVKTRELHRAARRKVP-- 205
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKS+L + ++ +++ + LFATLDP ++ +VLPSG+ ++LSDT
Sbjct: 206 ----FPIVALVGYTNAGKSSLFNRMTGAEVLAKDMLFATLDPTMRGLVLPSGRRIILSDT 261
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFISDLP +LV AF ATLEEV+EADL++HV D + P EE V ++L+ +GV+E+
Sbjct: 262 VGFISDLPHELVAAFRATLEEVLEADLILHVRDISHPETEEQAEDVGEILESLGVAED-- 319
Query: 412 KNMIEVWNKIDYHDE 426
+IEVWNKID E
Sbjct: 320 VALIEVWNKIDALSE 334
>gi|154248312|ref|YP_001419270.1| small GTP-binding protein [Xanthobacter autotrophicus Py2]
gi|154162397|gb|ABS69613.1| small GTP-binding protein [Xanthobacter autotrophicus Py2]
Length = 457
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 214/391 (54%), Gaps = 56/391 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
Q++L EA+ LA ++ D D VV + ++ + R TF G G VE
Sbjct: 48 QSRLEEAVGLAAAI--------DLD----------VVYSATIPLSEIRPATFLGSGKVE- 88
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ G +D +F +A LS +QQRNLE+AW V+DR LI+EIF A TKE
Sbjct: 89 ---ELEGVVRAEAVDLVFFDAALSPVQQRNLEKAWSAKVVDRTALILEIFGMRARTKEGA 145
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 146 LQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 188
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + ++E+V+RTR + RA+R+R VA+VGYTNAGKSTL + L
Sbjct: 189 RRLIGERIVRIEKELEQVKRTRGLHRASRKRVP------YPIVALVGYTNAGKSTLFNRL 242
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ +++ + LFATLDP L++V LP G +++LSDTVGFIS+LP QLV AF ATLEEV+EA
Sbjct: 243 TRAEVMAKDLLFATLDPTLRAVDLPHGTRIILSDTVGFISELPTQLVAAFRATLEEVLEA 302
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDG 436
DL++HV D + P+ + V VL+ +GV + +IEVWNKID +
Sbjct: 303 DLILHVRDISHPDTDAQAADVSDVLEDLGVDPQPGGRVIEVWNKID----------RLAP 352
Query: 437 DDISNFSRAEDKDTTSEPVDVECIDNYGGDD 467
D+ + PV V + G DD
Sbjct: 353 DEREQVENRAARGGAEAPVPVSALTGEGTDD 383
>gi|452964778|gb|EME69812.1| GTPase [Magnetospirillum sp. SO-1]
Length = 435
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 212/369 (57%), Gaps = 49/369 (13%)
Query: 61 PPRLFLVQPRLKP---PTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R +V P K +A+L EA+ LA G D D +V
Sbjct: 11 PSRALVVHPAFKGGEGSRLPEARLAEAVGLA--------GAIDLD----------IVAAE 52
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
++ K R T G G VE + + + E+ V+ LS +QQRNLE+AWG V+
Sbjct: 53 AVNVAKVRPATLMGKGAVERLAELVE----EREIALAVVDGHLSPVQQRNLEKAWGCKVI 108
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A A T+E LQ ELAAL Y++SRLVR T E
Sbjct: 109 DRTGLILEIFGARARTREGTLQVELAALSYQRSRLVR------SWTHLE----------- 151
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I +R L ++++V+RTR + R ARR+
Sbjct: 152 RQRGGFGFLGGPGETQIEADRRMIGDRIIKLERELDDVKRTRDLHRKARRKVP------Y 205
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFIS 356
VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++++VLPSG K++LSDTVGFIS
Sbjct: 206 PIVALVGYTNAGKSTLFNQLTRAEVMAKDMLFATLDPTMRTLVLPSGRKIILSDTVGFIS 265
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
DLP +LV AF ATLEEV+EAD++VHV D + P+ E V VL+++G++E + ++E
Sbjct: 266 DLPHELVAAFRATLEEVLEADVVVHVRDVSHPDTEAQAADVDTVLRELGLAEVVDRGLVE 325
Query: 417 VWNKIDYHD 425
NKID D
Sbjct: 326 ALNKIDLLD 334
>gi|315499852|ref|YP_004088655.1| gtp-binding proten hflx [Asticcacaulis excentricus CB 48]
gi|315417864|gb|ADU14504.1| GTP-binding proten HflX [Asticcacaulis excentricus CB 48]
Length = 448
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 158/400 (39%), Positives = 220/400 (55%), Gaps = 59/400 (14%)
Query: 68 QPRLKPPT--FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKAR 125
QP+ P T + +++L+EA LA +L D D +V + + K
Sbjct: 33 QPQGVPATRRYDESRLDEAAGLAIAL--------DLD----------IVAADTARVRKPN 74
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T FG G VE I E+ D + VN L+ IQQRNLE+AW + V+DR GLI+E
Sbjct: 75 PATLFGSGKVEEIVTLCEEVEA----DLVIVNTTLTPIQQRNLEKAWERKVIDRTGLILE 130
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T+E KLQ ELA L Y++SRLVR T E A +
Sbjct: 131 IFGRRARTREGKLQVELARLEYERSRLVRT------WTHLERQRATGTT----------- 173
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GET+++L RR I ++ L ++++VRRTR++ R+AR++ VA+VGY
Sbjct: 174 -GGPGETQIELDRRMIADKIKLLKGELDDVRRTRSLHRSARKKV------PYPIVALVGY 226
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ +++ + LFATLD L+++ LP G+ ++SDTVGFISDLP +LV
Sbjct: 227 TNAGKSTLFNHLTRAEVLAKDMLFATLDTTLRTLKLPGGRAAIISDTVGFISDLPHELVA 286
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATLEEV+EADL++HV D + P + V+QVL + +K +IEVWNKID
Sbjct: 287 AFRATLEEVLEADLILHVRDMSNPESDAQAQDVMQVLTHIHPDLDK-SRLIEVWNKIDLL 345
Query: 425 DEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYG 464
DEE D+ Y SRA ++P+ V I G
Sbjct: 346 DEEARDILY---------SRAVLDRAMNKPIMVSAITGEG 376
>gi|158424703|ref|YP_001525995.1| GTP-binding protein [Azorhizobium caulinodans ORS 571]
gi|158331592|dbj|BAF89077.1| GTP-binding protein [Azorhizobium caulinodans ORS 571]
Length = 459
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 208/350 (59%), Gaps = 46/350 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D K L V++ + + T+ G G VE
Sbjct: 48 EARLEEAVGLAAAI--------DLDVVYKGL---VLIS-------EVKPATYIGSGKVE- 88
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I G + E+ +FV+A LS +QQRNLE+AW V+DR LI+EIF + A TKE
Sbjct: 89 ---EIAGIVAAEEVGLVFVDAALSPVQQRNLEKAWSAKVVDRTALILEIFGSRARTKEGT 145
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 146 LQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 188
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR+I ER + ++E+V+RTRA+ R +R+R VA+VGYTNAGKSTL + L
Sbjct: 189 RRQIGERIIRIERELEQVKRTRALHRTSRKRVP------YPVVALVGYTNAGKSTLFNRL 242
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ +++ + LFATLDP L++V LP G +V+LSDTVGFIS+LP QLV AF ATLEEV+EA
Sbjct: 243 TQAEVMAQDLLFATLDPTLRAVDLPHGTRVILSDTVGFISELPTQLVAAFRATLEEVIEA 302
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
D+++HV D + P+ + V VL ++G+ E ++EVWNKID E
Sbjct: 303 DVILHVRDISHPDTDAQAADVKDVLTELGIDVEAGGRLVEVWNKIDILPE 352
>gi|221639215|ref|YP_002525477.1| HSR1-like GTP-binding protein [Rhodobacter sphaeroides KD131]
gi|221159996|gb|ACM00976.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides KD131]
Length = 447
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 208/367 (56%), Gaps = 50/367 (13%)
Query: 61 PPRLFLVQPRLKPPT---FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R F++ P ++ +L EA+ LA +L D E+ VV+ P
Sbjct: 31 PMRAFVLHPDIRTERSRRLPDLRLAEAVSLAAALP------------DMEIVGQEVVRLP 78
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
+ G FG G VE +K NG + + + V+ +S +QQRNLE+ WG +L
Sbjct: 79 RAQPG-----LLFGTGKVEELKARFNGLD----VGLVLVDGPVSPVQQRNLEKEWGVKLL 129
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 130 DRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTHLE----------- 172
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I E+ + Q+++V +TR + RA+RR+
Sbjct: 173 RQRGGLGFVGGPGETQIEADRRAIDEQVIRIRRQLDKVVKTRELHRASRRKVP------F 226
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFIS 356
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ V LPSG KV+LSDTVGFIS
Sbjct: 227 PIVALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKVILSDTVGFIS 286
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
DLP QLV AF ATLEEV+EADL++HV D P E V ++LQ +GV + +E
Sbjct: 287 DLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGV--KGATPQVE 344
Query: 417 VWNKIDY 423
VWNK+D
Sbjct: 345 VWNKLDL 351
>gi|240850696|ref|YP_002972096.1| GTP-binding protein HflX [Bartonella grahamii as4aup]
gi|240267819|gb|ACS51407.1| GTP-binding protein HflX [Bartonella grahamii as4aup]
Length = 447
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 210/395 (53%), Gaps = 46/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R+ T FG G V+ + C+I+ + ++ V+ L+ +QQRNLE+ W
Sbjct: 60 VVNYETINIATPRSATLFGKGKVDALTCYID----EYSIELAIVDHFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+K RLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKGRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIIRIRRELETVIKTRALHRAKRKK---- 214
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ VVLP GK +LLSDT
Sbjct: 215 --TSYPVVALVGYTNTGKSTLFNRLSGADVLAKNMLFATLDPTLRKVVLPHGKTILLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL + + + +
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVVEADLILHVRDMSDLDHRAHAQDVLEVLSSLDIDIDDM 332
Query: 412 KNMIEVWNKIDYHDEEMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVD 456
+++IEVWNKID DE+ + V + GD + RA +K E
Sbjct: 333 EHIIEVWNKIDMLDEQALNVLQTSAKTRLNPALMVSALKGDGLDQLLRAIEKRIFGEVQS 392
Query: 457 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 491
+E + + D F E+ E M + H+D S
Sbjct: 393 IEYL--LKPHEMSLIDWFY-ENSAEIMQEGHDDGS 424
>gi|332558240|ref|ZP_08412562.1| small GTP-binding protein [Rhodobacter sphaeroides WS8N]
gi|332275952|gb|EGJ21267.1| small GTP-binding protein [Rhodobacter sphaeroides WS8N]
Length = 447
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 208/367 (56%), Gaps = 50/367 (13%)
Query: 61 PPRLFLVQPRLKPPT---FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R F++ P ++ +L EA+ LA +L D E+ VV+ P
Sbjct: 31 PMRAFVLHPDIRTERSRRLPDLRLAEAVSLAAALP------------DMEIVGQEVVRLP 78
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
+ G FG G VE +K NG + + + V+ +S +QQRNLE+ WG +L
Sbjct: 79 RAQPG-----LLFGTGKVEELKARFNGLD----VGLVLVDGPVSPVQQRNLEKEWGVKLL 129
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 130 DRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTHLE----------- 172
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I E+ + Q+++V +TR + RA+RR+
Sbjct: 173 RQRGGLGFVGGPGETQIEADRRAIDEQVIRIRRQLDKVVKTRELHRASRRKVP------F 226
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFIS 356
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ V LPSG KV+LSDTVGFIS
Sbjct: 227 PIVALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKVILSDTVGFIS 286
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
DLP QLV AF ATLEEV+EADL++HV D P E V ++LQ +GV + +E
Sbjct: 287 DLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGV--KGATPQVE 344
Query: 417 VWNKIDY 423
VWNK+D
Sbjct: 345 VWNKLDL 351
>gi|126462218|ref|YP_001043332.1| small GTP-binding protein [Rhodobacter sphaeroides ATCC 17029]
gi|126103882|gb|ABN76560.1| small GTP-binding protein [Rhodobacter sphaeroides ATCC 17029]
Length = 447
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 208/367 (56%), Gaps = 50/367 (13%)
Query: 61 PPRLFLVQPRLKPPT---FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R F++ P ++ +L EA+ LA +L D E+ VV+ P
Sbjct: 31 PMRAFVLHPDIRTERSRRLPDLRLAEAVSLAAALP------------DMEIVGQEVVRLP 78
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
+ G FG G VE +K NG + + + V+ +S +QQRNLE+ WG +L
Sbjct: 79 RAQPG-----LLFGTGKVEELKARFNGLD----VGLVLVDGPVSPVQQRNLEKEWGVKLL 129
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 130 DRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTHLE----------- 172
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I E+ + Q+++V +TR + RA+RR+
Sbjct: 173 RQRGGLGFVGGPGETQIEADRRAIDEQVIRIRRQLDKVVKTRELHRASRRKVP------F 226
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFIS 356
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ V LPSG KV+LSDTVGFIS
Sbjct: 227 PIVALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKVILSDTVGFIS 286
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
DLP QLV AF ATLEEV+EADL++HV D P E V ++LQ +GV + +E
Sbjct: 287 DLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGV--KGATPQVE 344
Query: 417 VWNKIDY 423
VWNK+D
Sbjct: 345 VWNKLDL 351
>gi|395791091|ref|ZP_10470549.1| GTP-binding protein HflX [Bartonella alsatica IBS 382]
gi|395408454|gb|EJF75064.1| GTP-binding protein HflX [Bartonella alsatica IBS 382]
Length = 447
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 187/320 (58%), Gaps = 28/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V ++K R T FG G E + +I S+ ++ + V+ L+ +QQRNLE+ W
Sbjct: 60 IVHYETVKIVTLRPATLFGKGKAEALAHYI----SEYNIELVIVDYFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A A TKE LQ +LA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGARARTKEGILQVQLAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIICIRRELETVIKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ V+LP GK +LLSDT
Sbjct: 219 ------VVALVGYTNTGKSTLFNRLSGADVLAKDMLFATLDPTLRKVILPHGKTILLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL +G++
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVVEADLILHVRDMSDSDHYAHAKDVLEVLSGLGININDT 332
Query: 412 KNMIEVWNKIDYHDEEMGDV 431
+++IEVWNKID DE+ +V
Sbjct: 333 EHIIEVWNKIDLLDEQTLNV 352
>gi|395779857|ref|ZP_10460326.1| GTP-binding protein HflX [Bartonella washoensis 085-0475]
gi|395420232|gb|EJF86517.1| GTP-binding protein HflX [Bartonella washoensis 085-0475]
Length = 447
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/320 (43%), Positives = 185/320 (57%), Gaps = 28/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R TFFG G V+ + +I S+ + V+ L+ +QQRNLE+ W
Sbjct: 60 VVYYETVNIAMLRPATFFGKGKVDALAHYI----SEYHIALAIVDHFLTPVQQRNLEKIW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIIRIRRELETVVKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ VVLP GK VLLSDT
Sbjct: 219 ------VVALVGYTNTGKSTLFNRLSGADVLAKDMLFATLDPTLRKVVLPHGKTVLLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL +G++ +
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVVEADLILHVKDMSDLDHRAHAQDVLEVLSSLGINIDDT 332
Query: 412 KNMIEVWNKIDYHDEEMGDV 431
+++IEVWNKID DE +V
Sbjct: 333 EHIIEVWNKIDILDEHAMNV 352
>gi|423711414|ref|ZP_17685734.1| GTP-binding protein HflX [Bartonella washoensis Sb944nv]
gi|395414794|gb|EJF81232.1| GTP-binding protein HflX [Bartonella washoensis Sb944nv]
Length = 447
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 138/320 (43%), Positives = 185/320 (57%), Gaps = 28/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R TFFG G V+ + +I S+ + V+ L+ +QQRNLE+ W
Sbjct: 60 VVYYETVNIAMLRPATFFGKGKVDALAHYI----SEYHIALAIVDHFLTPVQQRNLEKIW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIIRIRRELETVVKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ VVLP GK VLLSDT
Sbjct: 219 ------VVALVGYTNTGKSTLFNRLSGADVLAKDMLFATLDPTLRKVVLPHGKTVLLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL +G++ +
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVVEADLILHVKDMSDLDHRAHAQDVLEVLSSLGINIDDT 332
Query: 412 KNMIEVWNKIDYHDEEMGDV 431
+++IEVWNKID DE +V
Sbjct: 333 EHIIEVWNKIDILDEHAMNV 352
>gi|260575069|ref|ZP_05843070.1| GTP-binding proten HflX [Rhodobacter sp. SW2]
gi|259022691|gb|EEW25986.1| GTP-binding proten HflX [Rhodobacter sp. SW2]
Length = 412
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 198/329 (60%), Gaps = 32/329 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + ++ G+ + T FG G V+ +K E +D + V+ +S +QQRNLE+AW
Sbjct: 34 VVGSEVVRVGRMQPGTLFGSGKVDELKARFAALE----VDLVLVDGPVSPVQQRNLEKAW 89
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G +LDR GLI+EIF A T+E +Q ELAAL Y+++RLVR T E
Sbjct: 90 GVKLLDRTGLILEIFADRARTREGVMQVELAALSYQRTRLVRA------WTHLE------ 137
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ++ + Q+E+V +TR + RAARRR
Sbjct: 138 -----RQRGGFGFVGGPGETQIEADRRAIDDQVIRIKRQLEKVVKTRELHRAARRRV--- 189
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
VA+VGYTNAGKSTL + ++ +++ + LFATLDP ++ +VLPSG K+++SDT
Sbjct: 190 ---PFPLVALVGYTNAGKSTLFNRMTGAEVLAKDMLFATLDPTMRGLVLPSGRKIIISDT 246
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFISDLP QLV AF ATLEEV+EADL++HV D + P E V ++L +GV +
Sbjct: 247 VGFISDLPTQLVAAFRATLEEVLEADLILHVRDISHPESAEQAADVAKILAALGV--KAA 304
Query: 412 KNMIEVWNKIDYHDEEMGD--VEYIDGDD 438
IE+WNK+D M D V+ G D
Sbjct: 305 TPQIEIWNKLDLVQGAMRDGLVQQAQGRD 333
>gi|365854975|ref|ZP_09395037.1| GTP-binding protein HflX [Acetobacteraceae bacterium AT-5844]
gi|363719638|gb|EHM02940.1| GTP-binding protein HflX [Acetobacteraceae bacterium AT-5844]
Length = 434
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 199/338 (58%), Gaps = 38/338 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + + R T G G VE K I + ++ + V+A L+ +QQRNLERAW
Sbjct: 53 IVHSAAFPLRTRRPSTLLGEGQVEAAKLEIE----EHQVGVVVVDAALTPVQQRNLERAW 108
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR GLI+EIF A T+E LQ ELA L Y+++RLVR T E
Sbjct: 109 GCKVIDRTGLILEIFGERARTREGTLQVELAHLEYQRTRLVR------SWTHLE------ 156
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GE+++++ RR I ER L ++E+VRRTR + RAAR R
Sbjct: 157 -----RQRGGFGFLGGPGESQIEIDRRLIGERIVKLKKELEQVRRTRGLHRAARTRV--- 208
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++++ LPSG+ V+LSDT
Sbjct: 209 ---PFPVVALVGYTNAGKSTLFNALTGAGVYAQDQLFATLDPTMRAIKLPSGRTVILSDT 265
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG------ 405
VGFISDLP QL++AF ATLEEV AD+++HV D P+ R+ V++VL+++
Sbjct: 266 VGFISDLPTQLIEAFRATLEEVAAADIILHVRDVAHPDTASQRSDVMEVLEEMASGPNPT 325
Query: 406 VSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFS 443
+ E IEV NK D +G + + G D + +
Sbjct: 326 LDENWQGRTIEVLNKADL----LGGIAVVPGTDAAAIA 359
>gi|429206479|ref|ZP_19197745.1| GTP-binding protein HflX [Rhodobacter sp. AKP1]
gi|428190520|gb|EKX59066.1| GTP-binding protein HflX [Rhodobacter sp. AKP1]
Length = 447
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 151/367 (41%), Positives = 207/367 (56%), Gaps = 50/367 (13%)
Query: 61 PPRLFLVQPRLKPPT---FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R F++ P ++ +L EA+ LA +L D E+ VV+ P
Sbjct: 31 PMRAFVLHPDIRTERSRRLPDLRLAEAVSLAAALP------------DMEIVGQEVVRLP 78
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
+ G FG G VE +K G + + + V+ +S +QQRNLE+ WG +L
Sbjct: 79 RAQPG-----LLFGTGKVEELKARFKGLD----VGLVLVDGPVSPVQQRNLEKEWGVKLL 129
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 130 DRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTHLE----------- 172
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I E+ + Q+++V +TR + RA+RR+
Sbjct: 173 RQRGGLGFVGGPGETQIEADRRAIDEQVIRIRRQLDKVVKTRELHRASRRKVP------F 226
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFIS 356
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ V LPSG KV+LSDTVGFIS
Sbjct: 227 PIVALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKVILSDTVGFIS 286
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
DLP QLV AF ATLEEV+EADL++HV D P E V ++LQ +GV + +E
Sbjct: 287 DLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGV--KGATPQVE 344
Query: 417 VWNKIDY 423
VWNK+D
Sbjct: 345 VWNKLDL 351
>gi|395793427|ref|ZP_10472829.1| GTP-binding protein HflX [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|423713896|ref|ZP_17688156.1| GTP-binding protein HflX [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395421702|gb|EJF87938.1| GTP-binding protein HflX [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395430809|gb|EJF96838.1| GTP-binding protein HflX [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 447
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 150/395 (37%), Positives = 208/395 (52%), Gaps = 46/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T FG G V+ + +I S+ ++ + V+ L+ +QQRNLE+ W
Sbjct: 60 VVYYEAINIITPRPATLFGKGKVDALAHYI----SEYYVELVIVDYFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 KCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKITRIQRELETVTKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ V+LP GK +LLSDT
Sbjct: 219 ------VVALVGYTNTGKSTLFNRLSGADVLAKDMLFATLDPTLRKVILPHGKTILLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL +G+ +
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVVEADLILHVRDMSDFDHRAHAKDVLEVLSSLGIDIDDT 332
Query: 412 KNMIEVWNKIDYHDEEMGDVEYIDG---------------DDISNFSRAEDKDTTSEPVD 456
+++IEVWNKID DE +V + D + A +K E +
Sbjct: 333 EHIIEVWNKIDILDEHALNVLHTSAKTRLNPAVMVSALMNDGLDQLLTAIEKRIFGEMQN 392
Query: 457 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 491
VEC+ + D F GE M + H D S
Sbjct: 393 VECL--LRPHEMPLIDWFYKNS-GEIMQEGHEDGS 424
>gi|304391556|ref|ZP_07373498.1| GTP-binding protein HflX [Ahrensia sp. R2A130]
gi|303295785|gb|EFL90143.1| GTP-binding protein HflX [Ahrensia sp. R2A130]
Length = 455
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 146/354 (41%), Positives = 207/354 (58%), Gaps = 50/354 (14%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA+ LA +++ + +V + S+ K +A T FG G VE +
Sbjct: 55 ARLDEAVGLARAIDLE------------------IVHSASVPLSKLKAGTLFGTGKVEEL 96
Query: 139 KCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
K I LDA + V+ L+ +QQRNLE+ W V+DR GLI+EIF A A TKE
Sbjct: 97 KGLI------AALDAGLVVVDHPLTPVQQRNLEKEWQAKVVDRTGLILEIFGARAQTKEG 150
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
+LQ ELA L Y+K RLVR + RG G G GF+ G GET+++
Sbjct: 151 RLQVELAHLNYQKGRLVR-------------SWTHLERQRGGGGGSGGFLGGPGETQIES 197
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLV 314
RR++ + + L ++E+VRRTR + R+ R+R H VA+VGYTNAGKSTL
Sbjct: 198 DRRQLQGKVNALEKELEKVRRTRTLHRSQRKRIPH--------PVVALVGYTNAGKSTLF 249
Query: 315 SALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEV 373
++L+ +++ + LFATLDP L+ + LP G + +LSDTVGF+SDLP LV AF ATLEEV
Sbjct: 250 NSLTGAEVMAKDMLFATLDPTLRQLHLPQGTQAILSDTVGFVSDLPTHLVAAFRATLEEV 309
Query: 374 VEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+EA+L++HV D + + + V +L Q+GV E+ ++EVWNKID D E
Sbjct: 310 IEAELILHVRDISDSDTKAQAEDVYTILSQLGVGEDGHSRVVEVWNKIDLLDAE 363
>gi|49475521|ref|YP_033562.1| GTP-binding protein HflX [Bartonella henselae str. Houston-1]
gi|49238327|emb|CAF27551.1| GTP-binding protein hflX [Bartonella henselae str. Houston-1]
Length = 447
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 154/395 (38%), Positives = 215/395 (54%), Gaps = 46/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T FG G V+ + +I S+ +++ + V+ L+ +QQRNLE+ W
Sbjct: 60 VVYYETVNINIPRPATLFGTGKVKALTHYI----SEYDIELVIVDHFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE------ 163
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + E+ + ++E+V +TRA+ RA R++
Sbjct: 164 -----RQRGGHGFLGGPGETQIEADRRLLQEKIIRIRRELEKVIKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTN GKSTL + LS +++ + LFATLDP L+ VVLP GK +LLSDT
Sbjct: 219 ------IVALVGYTNTGKSTLFNRLSGANVLAKDMLFATLDPTLRKVVLPHGKTILLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS LP L+ AF ATLEEVVEADL++HV D + + H VL+VL +G+ +
Sbjct: 273 VGFISHLPTHLIAAFRATLEEVVEADLILHVRDMSDLDHRAHGQDVLEVLADLGIDIDDT 332
Query: 412 KNMIEVWNKIDYHDEEMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVD 456
+++IEVWNKID DE + V + D + A +K E
Sbjct: 333 EHIIEVWNKIDILDEHALNVLQTSARTRLNPAVMVSALMSDGLDQLLTAIEKRVFGEMQS 392
Query: 457 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 491
+EC+ + + E+ GE M + HND S
Sbjct: 393 IECLLR---PHEMSLISWFYENSGEIMQEGHNDGS 424
>gi|389877556|ref|YP_006371121.1| GTP-binding protein HFLX [Tistrella mobilis KA081020-065]
gi|388528340|gb|AFK53537.1| GTP-binding protein HFLX [Tistrella mobilis KA081020-065]
Length = 455
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 182/307 (59%), Gaps = 28/307 (9%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
+ R T G G V+ IK + A +D + +N L+ IQQRNLE+AW V+DR+
Sbjct: 73 ARMRPSTLLGSGKVDEIKAKLEAAP----VDLVVMNRPLTPIQQRNLEKAWNVKVIDRIW 128
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A T+E +LQ ELA L Y++SRLVR T E R G
Sbjct: 129 LILEIFADRARTREGRLQVELARLGYQRSRLVR------SWTHLE-----------RQRG 171
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
GRGF++G GET+++ RR I ++ + L Q+ EV RTR + R RR VA
Sbjct: 172 GRGFLAGPGETQIETDRRIIDDKMARLKLQLAEVVRTRELHRKKRREVP------YPVVA 225
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPL 360
+VGYTNAGKSTL + ++ + + + LFATLDP ++++ LPSG+ V+LSDTVGF+S+LP
Sbjct: 226 LVGYTNAGKSTLFNRVTGASVMAKDMLFATLDPTMRALDLPSGRRVILSDTVGFVSELPT 285
Query: 361 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 420
L+ AF ATLEEV EA L++HV D P+ R VL VL ++G+ +++E NK
Sbjct: 286 GLIAAFRATLEEVREAALIIHVRDIADPDTGAQRRDVLHVLGELGMGHRLADDVLEFRNK 345
Query: 421 IDYHDEE 427
+D + E
Sbjct: 346 LDMLEGE 352
>gi|182678502|ref|YP_001832648.1| GTP-binding proten HflX [Beijerinckia indica subsp. indica ATCC
9039]
gi|182634385|gb|ACB95159.1| GTP-binding proten HflX [Beijerinckia indica subsp. indica ATCC
9039]
Length = 466
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 210/388 (54%), Gaps = 54/388 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
QA+ +E L LA +L D D D+ L L + + TF G G V
Sbjct: 51 QARFDEVLGLAEAL--------DLDIVDQRL----------LTLAEIKPSTFLGTGKVAE 92
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ I AE+ + + ++ LS +QQRNLE+A G V+DR GLI+EIF A T+E
Sbjct: 93 LGEAIKAAEA----ELVIMDCALSPVQQRNLEKALGAKVIDRTGLILEIFGRRARTREGS 148
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 149 LQVELAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 191
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR + ER + L + V+RTR + R RR +A+VGYTNAGKSTL + L
Sbjct: 192 RRLLQERMTRLEQDLAGVKRTRGLHRKTRR------DVPYPIIALVGYTNAGKSTLFNRL 245
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+++D+ + LFATLDP L+S+ LP G KV+LSDTVGFISDLP LV AF ATLEEV+EA
Sbjct: 246 TEADVLAQNMLFATLDPTLRSLTLPHGAKVILSDTVGFISDLPTMLVSAFRATLEEVLEA 305
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDG 436
DL++HV D + E V VL ++G+ + ++EVWNK D DEE
Sbjct: 306 DLILHVRDIAHQDAEAQCQDVESVLAELGIDMADEQRILEVWNKADLLDEEA------QA 359
Query: 437 DDISNFSRAEDKDTTSEPVDVECIDNYG 464
++N R K+ ++P+ V + G
Sbjct: 360 AALNNARRW--KNAENQPILVSALTGQG 385
>gi|304321928|ref|YP_003855571.1| GTP-binding protein HFLX [Parvularcula bermudensis HTCC2503]
gi|303300830|gb|ADM10429.1| GTP-binding protein HFLX [Parvularcula bermudensis HTCC2503]
Length = 469
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/389 (39%), Positives = 216/389 (55%), Gaps = 38/389 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+FG G V+ I I+ A+ L + VN L+ +Q RNLERAW VLDR LI+
Sbjct: 64 RPATYFGTGKVKEIGELIDNADPSPGL--VVVNTQLTPVQHRNLERAWQAKVLDRTALIL 121
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE +LQ +LA L Y++SRLVR T E R GG G
Sbjct: 122 EIFGERAQTKEGRLQVDLAHLTYQRSRLVR------SWTHLE-----------RQRGGAG 164
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GE +++ RR + + L +Q+E+VRRTR +QRA R+R +A+VG
Sbjct: 165 FLGGPGERQIEADRRVLAGKIDRLKAQLEQVRRTRTLQRAKRKRAPHP------VIALVG 218
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLV 363
YTNAGKS+L + ++ + + + LFATLDP +++V LP G+ +LSDTVGFISDLP LV
Sbjct: 219 YTNAGKSSLFNRMTGAGVTAQDLLFATLDPTMRAVDLPGVGRAILSDTVGFISDLPTDLV 278
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EAD+L+HV D + E R VL VL ++G+ E+ + +IEVWNKID
Sbjct: 279 AAFRATLEEVLEADILLHVRDISHSEHEAQRLDVLSVLGELGIDEDSPQQVIEVWNKIDL 338
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESM 483
+ + S F+ A T P+ V + + G+ + G + L +
Sbjct: 339 LSPDDQHTAVLTAAHRSTFAEA----TLLSPL-VSAVSAHSGEGLEGLFGAIDHLLTQDY 393
Query: 484 NKNH------NDYSDGWLLS-GDEQDNVE 505
H + +D WL + GD ++ VE
Sbjct: 394 TLFHVRLGPADGAADAWLHAHGDIREIVE 422
>gi|310815879|ref|YP_003963843.1| GTP-binding protein HflX [Ketogulonicigenium vulgare Y25]
gi|385233393|ref|YP_005794735.1| GTP binding protein-like protein [Ketogulonicigenium vulgare
WSH-001]
gi|308754614|gb|ADO42543.1| GTP-binding protein HflX [Ketogulonicigenium vulgare Y25]
gi|343462304|gb|AEM40739.1| GTP binding protein-like protein [Ketogulonicigenium vulgare
WSH-001]
Length = 432
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/378 (40%), Positives = 216/378 (57%), Gaps = 51/378 (13%)
Query: 53 LFNRDPDDPPRLFLVQPRLKPPTFLQ---AKLNEALCLANSLEEQRDGYFDTDFFDKELP 109
+ N D P ++V P +K + A L+EA LA++L D E
Sbjct: 1 MLNHQQVDTPA-WIVHPEIKSDVSRREADAALDEAKALADALP-------GLDVLGAE-- 50
Query: 110 PHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLE 169
+V+ P + +G FG G V+ +K I K + ++ LS +QQRNLE
Sbjct: 51 ---IVRLPKVHAG-----MLFGSGKVQELKERITAHGVK----LVLIDGALSPVQQRNLE 98
Query: 170 RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGE 229
R WG +LDR+ LI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 99 REWGVKILDRMSLILEIFSDRARTREGVLQVEIAALSYQRTRLVRA------WTHLE--- 149
Query: 230 AEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
R GG GF+ G GET+ + RR I E+ L Q+E+V++TRA+ RAAR +
Sbjct: 150 --------RQRGGFGFVGGPGETQRENDRRAIDEQLLRLERQLEKVQKTRALHRAARAKV 201
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLL 348
VA+VGYTNAGKS+L + ++ +D+ + +LFATLDP ++ + LP G+ V++
Sbjct: 202 P------YPIVALVGYTNAGKSSLFNRVTGADVLAKDQLFATLDPTMRRLTLPDGQEVIM 255
Query: 349 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 408
SDTVGFISDLP QLV AF ATLEEV+EADL++HV D + P + V+Q+L Q+GV E
Sbjct: 256 SDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDISHPQTAQQARDVMQILHQIGVPE 315
Query: 409 EKLKNMIEVWNKIDYHDE 426
+ M+EV NKID DE
Sbjct: 316 D--APMLEVLNKIDLLDE 331
>gi|217976723|ref|YP_002360870.1| GTP-binding proten HflX [Methylocella silvestris BL2]
gi|217502099|gb|ACK49508.1| GTP-binding proten HflX [Methylocella silvestris BL2]
Length = 469
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 187/303 (61%), Gaps = 28/303 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R TF G G + I + AE+ +D + ++ LS IQQRNLE+A+ V+DR GLI+
Sbjct: 78 RPATFIGKGKAQEIADLVQ-AEN---IDLVIMDCALSPIQQRNLEKAFSAKVIDRTGLIL 133
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T E LQ ELA L Y+KSRLVR T E R GG G
Sbjct: 134 EIFGQRARTSEGALQVELAHLAYQKSRLVR------SWTHLE-----------RQRGGFG 176
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER + + +E+V+RTR + R +RR VA+VG
Sbjct: 177 FLGGPGETQIETDRRLIQERMTRIEQDLEKVKRTRGLHRKSRR------DVPYPVVALVG 230
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + ++ SD+F++ LFATLDP L++V L +G K++LSDTVGFISDLPL LV
Sbjct: 231 YTNAGKSTLFNRMTHSDVFAENMLFATLDPTLRAVSLGAGAKIILSDTVGFISDLPLMLV 290
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EADL++HV D + + RT V +L+ +GV + + ++EVWNK D
Sbjct: 291 SAFRATLEEVLEADLILHVRDIAHEDADAQRTDVETILRDLGVDPDDHRRILEVWNKADL 350
Query: 424 HDE 426
DE
Sbjct: 351 LDE 353
>gi|288958341|ref|YP_003448682.1| GTP-binding protein [Azospirillum sp. B510]
gi|288910649|dbj|BAI72138.1| GTP-binding protein [Azospirillum sp. B510]
Length = 426
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 206/358 (57%), Gaps = 49/358 (13%)
Query: 71 LKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFF 130
++PP +++L EA+ LA +++ D VV K + + T
Sbjct: 14 MRPP---ESRLEEAVGLAQAIQ-----------LD-------VVHAECAKVNRPQPSTLL 52
Query: 131 GPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAH 190
G GTVE + + +E+ + ++ LS +QQRNLER+ V+DR GLI+EIF A
Sbjct: 53 GSGTVEQLAQVVEESEAA----LVILDHALSPVQQRNLERSLKAKVIDRTGLILEIFGAR 108
Query: 191 AHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAG 250
A T+E LQ ELA+L Y+KSRLVR T E R GG GF+ G G
Sbjct: 109 ARTREGMLQVELASLTYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPG 151
Query: 251 ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGK 310
E++L+L RR I +R + ++EEVRRTR + R AR + VA+VGYTNAGK
Sbjct: 152 ESQLELDRRLIGDRIIKIKKELEEVRRTRGLHRKARAKVP------YPVVALVGYTNAGK 205
Query: 311 STLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHAT 369
STL + L+++D+F+ LFATLDP ++ V LPSG KV+LSDTVGFISDLP LV AF AT
Sbjct: 206 STLFNRLANADVFAQDLLFATLDPTMRQVTLPSGRKVILSDTVGFISDLPHGLVAAFRAT 265
Query: 370 LEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
LEEV AD+++HV D + E + V +VL +G+ E +IEV NKID DEE
Sbjct: 266 LEEVDAADIILHVRDIAHIDSEAQKADVHEVLSDMGIDPEIDDRVIEVLNKIDALDEE 323
>gi|395778127|ref|ZP_10458640.1| GTP-binding protein HflX [Bartonella elizabethae Re6043vi]
gi|423715615|ref|ZP_17689839.1| GTP-binding protein HflX [Bartonella elizabethae F9251]
gi|395418436|gb|EJF84763.1| GTP-binding protein HflX [Bartonella elizabethae Re6043vi]
gi|395429742|gb|EJF95803.1| GTP-binding protein HflX [Bartonella elizabethae F9251]
Length = 447
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/320 (41%), Positives = 183/320 (57%), Gaps = 28/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + R T FG G + + +I+ + ++ ++ L+ IQQRNLE+ W
Sbjct: 60 VVHYEIISIATPRPATLFGKGKADALANYIH----EYSIELAIIDHFLTPIQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+K RLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKGRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIIRIRRELETVIKTRALHRAKRKK---- 214
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKSTL + LS +D+ + LFATLDP L+ VVLP GK +LLSDT
Sbjct: 215 --TSYPVVALVGYTNAGKSTLFNRLSGADVLAKNMLFATLDPTLRKVVLPHGKSILLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEV+EADL++HV D + N H VL+VL + + + L
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVIEADLIIHVRDMSDLNHRAHAQDVLEVLSSLDIDIDDL 332
Query: 412 KNMIEVWNKIDYHDEEMGDV 431
+++IEVWNKID DE+ +V
Sbjct: 333 EHIIEVWNKIDMLDEQALNV 352
>gi|77463363|ref|YP_352867.1| GTP-binding protein [Rhodobacter sphaeroides 2.4.1]
gi|77387781|gb|ABA78966.1| Putative GTP-binding protein [Rhodobacter sphaeroides 2.4.1]
Length = 416
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/317 (43%), Positives = 190/317 (59%), Gaps = 30/317 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP +V ++ +A+ FG G VE +K G + + + V+ +S +QQRN
Sbjct: 33 LPDMEIVGQEVVRLPRAQPGLLFGTGKVEELKARFKGLD----VGLVLVDGPVSPVQQRN 88
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+ WG +LDR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 89 LEKEWGVKLLDRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTHLE- 141
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ + Q+++V +TR + RA+RR
Sbjct: 142 ----------RQRGGLGFVGGPGETQIEADRRAIDEQVIRIRRQLDKVVKTRELHRASRR 191
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KV 346
+ VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ V LPSG KV
Sbjct: 192 KVP------FPIVALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKV 245
Query: 347 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 406
+LSDTVGFISDLP QLV AF ATLEEV+EADL++HV D P E V ++LQ +GV
Sbjct: 246 ILSDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGV 305
Query: 407 SEEKLKNMIEVWNKIDY 423
+ +EVWNK+D
Sbjct: 306 --KGATPQVEVWNKLDL 320
>gi|84516232|ref|ZP_01003592.1| GTP-binding protein HflX [Loktanella vestfoldensis SKA53]
gi|84509928|gb|EAQ06385.1| GTP-binding protein HflX [Loktanella vestfoldensis SKA53]
Length = 424
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 197/311 (63%), Gaps = 35/311 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V+ P L +GK FG G +E ++ I AE++ EL + V+ ++ +QQRNLE+AW
Sbjct: 51 IVRLPKLHAGK-----LFGKGKIEELR--IIFAEAEVEL--VLVDGSVTPVQQRNLEKAW 101
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G +LDR GLI+EIF+ A T E LQ E+AAL Y+++RLVR T E
Sbjct: 102 GVKLLDRTGLILEIFSDRARTSEGVLQVEMAALSYQRTRLVRA------WTHLE------ 149
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ++ L Q+E+V +TRA+ RA+R +
Sbjct: 150 -----RQRGGLGFVGGPGETQIEADRRAIDDQLVRLRRQLEKVGKTRALHRASRAK---- 200
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
VA+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ + LP+G +V++SDT
Sbjct: 201 --VPFPIVALVGYTNAGKSTLFNMLTGADVLAKDMLFATLDPTMRKITLPTGDEVIMSDT 258
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFISDLP +LV AF ATLEEV++ADL++H+ D + EE V+ +L ++GV+E
Sbjct: 259 VGFISDLPTELVAAFRATLEEVLDADLILHIRDISHDQTEEQACDVMAILHKLGVAEN-- 316
Query: 412 KNMIEVWNKID 422
+IEVWNK+D
Sbjct: 317 APLIEVWNKVD 327
>gi|395781606|ref|ZP_10462024.1| GTP-binding protein HflX [Bartonella rattimassiliensis 15908]
gi|395421039|gb|EJF87297.1| GTP-binding protein HflX [Bartonella rattimassiliensis 15908]
Length = 445
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 187/320 (58%), Gaps = 28/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ K R+ T FG G V+ + +I+ + ++ + V+ +L+ IQQRNLE+ W
Sbjct: 60 VVSYETINIVKLRSATLFGKGRVDALAHYID----EYSIELVIVDHLLTPIQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVQLAHLSYQKGRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIVRIRRELETVIKTRALHRAKRKK---- 214
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ VVLP GK VLLSDT
Sbjct: 215 --TSYPVVALVGYTNTGKSTLFNRLSGADILAKNMLFATLDPILRKVVLPHGKTVLLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL + + +
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVVEADLILHVRDMSDLDHRAHAQDVLEVLSSLDIDVDDT 332
Query: 412 KNMIEVWNKIDYHDEEMGDV 431
+++IEVWNKID DE+ +V
Sbjct: 333 EHIIEVWNKIDTVDEQALNV 352
>gi|296445792|ref|ZP_06887744.1| GTP-binding proten HflX [Methylosinus trichosporium OB3b]
gi|296256620|gb|EFH03695.1| GTP-binding proten HflX [Methylosinus trichosporium OB3b]
Length = 462
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 187/316 (59%), Gaps = 29/316 (9%)
Query: 114 VQNPSLKS-GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+ P L S + R TF G G VE I + AE+ + ++ LS +QQRNLE+AW
Sbjct: 60 IAEPILVSLSQVRPSTFLGKGKVEEIADAVKNAEAT----LVTMDCQLSPVQQRNLEKAW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR GLI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 GAKVIDRTGLILEIFGRRARTKEGALQVELAHLEYQKSRLVR------SWTHLE------ 163
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ER + + +E+V+RTR + R RR
Sbjct: 164 -----RQRGGFGFLGGPGETQIETDRRLIEERMARIERDLEQVKRTRGLHRKNRREVP-- 216
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
VA+VGYTNAGKSTL + L+ + + ++ LFATLDP L+ + LP G KVLLSDT
Sbjct: 217 ----YPVVALVGYTNAGKSTLFNRLTKAGVLAEDMLFATLDPTLRQIRLPHGAKVLLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFISDLP L+ AF ATLEEV+ AD+++HV D + + E V +L ++G+S E
Sbjct: 273 VGFISDLPTMLITAFRATLEEVMLADVVLHVRDVSHEDWEAQAEDVEAILAELGLSGEAG 332
Query: 412 KNMIEVWNKIDYHDEE 427
++EVWNKID D E
Sbjct: 333 ARILEVWNKIDALDPE 348
>gi|367476723|ref|ZP_09476098.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 285]
gi|365270919|emb|CCD88566.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 285]
Length = 458
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 141/306 (46%), Positives = 189/306 (61%), Gaps = 28/306 (9%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
G+ R T+ G G V+ I I G + + + ++ LS IQQRNLE+AW VLDR G
Sbjct: 76 GQIRPATYLGKGKVDEIAGVIAGQGA----ELVVMDCALSPIQQRNLEKAWNTKVLDRTG 131
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A TKE LQ ELA L Y++SRLVR T E R G
Sbjct: 132 LILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRG 174
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R VA
Sbjct: 175 GFGFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQRVP------YRVVA 228
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPL 360
+VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP
Sbjct: 229 LVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPT 288
Query: 361 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 420
QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E ++IEVWNK
Sbjct: 289 QLVAAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLSQLGIDPEATDSIIEVWNK 348
Query: 421 IDYHDE 426
ID DE
Sbjct: 349 IDRLDE 354
>gi|359792292|ref|ZP_09295112.1| GTP-binding proten HflX [Mesorhizobium alhagi CCNWXJ12-2]
gi|359251650|gb|EHK54988.1| GTP-binding proten HflX [Mesorhizobium alhagi CCNWXJ12-2]
Length = 463
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 160/382 (41%), Positives = 213/382 (55%), Gaps = 58/382 (15%)
Query: 50 VVTLFNRDP---DDPPRLFLVQPRL-KPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFD 105
+V L +R P +D R PRL + P +A+L+EA+ LA ++ D D
Sbjct: 32 IVPLLSRSPRTDEDTGR-----PRLNRSP---EARLDEAVGLAQAI--------DLDIVH 75
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
K + V + +P R T FG G VE I I G + + V+ L+ +QQ
Sbjct: 76 KAI---VTLNDP-------RPSTLFGSGKVEEIAQVIK----DGHAELLIVDHPLTPVQQ 121
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+A VLDR GLI+EIF A TKE LQ +LA L Y+K RLVR T
Sbjct: 122 RNLEKATEAKVLDRTGLILEIFGERARTKEGTLQVDLAHLNYQKGRLVR------SWTHL 175
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR + E+ + L ++E VRRTR + RA
Sbjct: 176 E-----------RQRGGAGFLGGPGETQIESDRRALQEKITKLKRELETVRRTRDLHRAK 224
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK 345
R++ VA+VGYTNAGKSTL + L+ + + ++ LFATLDP L+ V LP G
Sbjct: 225 RKKVP------FPVVAIVGYTNAGKSTLFNRLTGAGVLAEDMLFATLDPTLRRVRLPHGT 278
Query: 346 -VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 404
V+LSDTVGFISDLP L+ AF ATLEEVVEADL++H+ D + P+ V ++L +
Sbjct: 279 PVILSDTVGFISDLPTHLIAAFRATLEEVVEADLIIHLRDISDPDTAAQAEDVERILVDL 338
Query: 405 GVSEEKLKNMIEVWNKIDYHDE 426
GV K +IEVWNKID DE
Sbjct: 339 GVDASDEKRIIEVWNKIDRLDE 360
>gi|144899203|emb|CAM76067.1| GTP-binding protein, HSR1 [Magnetospirillum gryphiswaldense MSR-1]
Length = 437
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 147/350 (42%), Positives = 201/350 (57%), Gaps = 46/350 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
Q++L+EA+ L ++ D D EL P K R T G G VE
Sbjct: 33 QSRLDEAVGLTQAI--------DLDVVAAELVP----------VSKRRPATLIGKGAVER 74
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ + + + V+ LS +QQRNLE+ W V+DR GLI+EIF A A T+E
Sbjct: 75 LAIIVKDQD----IQVAIVDGHLSPVQQRNLEKEWACKVIDRTGLILEIFGARARTREGS 130
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELAAL Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 131 LQVELAALSYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 173
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I +R L ++EEV+RTR + R+ARRR VA+VGYTNAGKSTL + L
Sbjct: 174 RRMIGDRIVKLKRELEEVKRTRELHRSARRRVP------YPIVALVGYTNAGKSTLFNRL 227
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ S++ + LFATLDP ++ + LPSG+ ++LSDTVGFISDLP +LV AF ATLEEV+EA
Sbjct: 228 TQSEVLAKDMLFATLDPTMRGLKLPSGRQIILSDTVGFISDLPHELVAAFRATLEEVLEA 287
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
D++VHV D P+ E + V VL+++G+ + + ++E NKID E
Sbjct: 288 DVVVHVRDMAHPDTEAQASDVELVLKELGLGDMVDRGLVEALNKIDLLPE 337
>gi|148260756|ref|YP_001234883.1| HSR1-like GTP-binding protein [Acidiphilium cryptum JF-5]
gi|338986380|ref|ZP_08633437.1| HSR1-like GTP-binding protein [Acidiphilium sp. PM]
gi|146402437|gb|ABQ30964.1| GTP-binding protein HflX [Acidiphilium cryptum JF-5]
gi|338206695|gb|EGO94774.1| HSR1-like GTP-binding protein [Acidiphilium sp. PM]
Length = 435
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 193/337 (57%), Gaps = 33/337 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T FG G V I I ++ E+ V++ LS +QQRNLERAW V+DR GLI+
Sbjct: 59 RPATLFGEGQVRRIGESI----AEAEIGVAVVDSTLSPVQQRNLERAWKCKVIDRTGLIL 114
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
+IF A T E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 115 DIFGERARTAEGVLQVELAHLAYQRSRLVR------SWTHLE-----------RQRGGFG 157
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R + L +++EVRRTRA+ RAAR R VA+VG
Sbjct: 158 FLGGPGETQIEADRRLITDRIARLRRELDEVRRTRALHRAARNRV------PYPVVALVG 211
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLV 363
YTNAGKSTL +AL+ + + + +LFATLDP ++ +VLPSG+ +LSDTVGFISDLP +LV
Sbjct: 212 YTNAGKSTLFNALTGATVHAQDQLFATLDPTMRLIVLPSGRQAILSDTVGFISDLPTELV 271
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----VSEEKLKNMIEVWN 419
AF ATLEEV AD+++HV DC P+ R V+ VL + + E IEV N
Sbjct: 272 AAFRATLEEVAAADIILHVRDCAHPDSAAQRADVVSVLDGMARSGMIDEGWSSRCIEVMN 331
Query: 420 KIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
KID D D+ +S S E+ DT +D
Sbjct: 332 KIDLLDPAARDLPGASAIAVSALS-GENLDTLRATID 367
>gi|326403953|ref|YP_004284035.1| GTP-binding protein HflX [Acidiphilium multivorum AIU301]
gi|325050815|dbj|BAJ81153.1| GTP-binding protein HflX [Acidiphilium multivorum AIU301]
Length = 435
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 193/337 (57%), Gaps = 33/337 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T FG G V I I ++ E+ V++ LS +QQRNLERAW V+DR GLI+
Sbjct: 59 RPATLFGEGQVRRIGESI----AEAEIGVAVVDSTLSPVQQRNLERAWKCKVIDRTGLIL 114
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
+IF A T E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 115 DIFGERARTAEGVLQVELAHLAYQRSRLVR------SWTHLE-----------RQRGGFG 157
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R + L +++EVRRTRA+ RAAR R VA+VG
Sbjct: 158 FLGGPGETQIEADRRLITDRIARLRRELDEVRRTRALHRAARNRV------PYPVVALVG 211
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLV 363
YTNAGKSTL +AL+ + + + +LFATLDP ++ +VLPSG+ +LSDTVGFISDLP +LV
Sbjct: 212 YTNAGKSTLFNALTGATVHAQDQLFATLDPTMRLIVLPSGRQAILSDTVGFISDLPTELV 271
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----VSEEKLKNMIEVWN 419
AF ATLEEV AD+++HV DC P+ R V+ VL + + E IEV N
Sbjct: 272 AAFRATLEEVAAADIILHVRDCAHPDSAAQRADVVSVLDGMARSGMIDEGWSSRCIEVMN 331
Query: 420 KIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
KID D D+ +S S E+ DT +D
Sbjct: 332 KIDLLDPAARDLPGASAIAVSALS-GENLDTLRATID 367
>gi|146340795|ref|YP_001205843.1| GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 278]
gi|146193601|emb|CAL77618.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 278]
Length = 459
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 140/306 (45%), Positives = 188/306 (61%), Gaps = 28/306 (9%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
G+ R T+ G G V+ I G + E + + ++ LS IQQRNLE+AW VLDR G
Sbjct: 77 GQIRPATYLGKGKVD----EIAGVIASQEAELVVMDCALSPIQQRNLEKAWNTKVLDRTG 132
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A TKE LQ ELA L Y++SRLVR T E R G
Sbjct: 133 LILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRG 175
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R VA
Sbjct: 176 GFGFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQRVP------YRVVA 229
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPL 360
+VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP
Sbjct: 230 LVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPT 289
Query: 361 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 420
QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E +IEVWNK
Sbjct: 290 QLVAAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLSQLGIDPEATDTIIEVWNK 349
Query: 421 IDYHDE 426
ID D+
Sbjct: 350 IDRLDD 355
>gi|395767148|ref|ZP_10447683.1| GTP-binding protein HflX [Bartonella doshiae NCTC 12862]
gi|395414461|gb|EJF80903.1| GTP-binding protein HflX [Bartonella doshiae NCTC 12862]
Length = 447
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 208/395 (52%), Gaps = 46/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T FG G V+ + +IN + ++ V+ L+ +QQRNLE+ W
Sbjct: 60 VVHYEAINISAPRPATLFGKGKVDALANYIN----EYHIELAIVDHFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++ V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIVRIRRELATVVKTRALHRAKRKK---- 214
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKSTL + LS +D + LFATLDP L+ VVLP GK +LLSDT
Sbjct: 215 --SSYPVVALVGYTNAGKSTLFNRLSGADGLAKDMLFATLDPTLRKVVLPHGKAILLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEV+EADL++HV D + + H VL+VL +G+ +
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVIEADLILHVRDMSDFDHRAHGQDVLEVLSSLGIDIDDA 332
Query: 412 KNMIEVWNKIDYHDEEMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVD 456
+++IEVWNKID DE + + V + G+ +S +K E
Sbjct: 333 EHIIEVWNKIDLLDEHVLNALQINAKTRLNSTVMVSALTGEGLSQLLTVIEKRIFGEMQS 392
Query: 457 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 491
+ C+ + D F E+ GE + + H+D S
Sbjct: 393 IACL--LSPHEMPLIDWF-YENAGEIVQEGHDDGS 424
>gi|365883797|ref|ZP_09422909.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 375]
gi|365287676|emb|CCD95440.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 375]
Length = 459
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 145/315 (46%), Positives = 193/315 (61%), Gaps = 28/315 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV++ G+ R T+ G G V+ I I A EL + ++ LS IQQRNLE+AW
Sbjct: 68 VVESILALIGQIRPATYLGKGKVDEIAGVI--ASQGAEL--VVMDCALSPIQQRNLEKAW 123
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDR GLI+EIF A TKE LQ ELA L Y++SRLVR T E
Sbjct: 124 NTKVLDRTGLILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE------ 171
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R
Sbjct: 172 -----RQRGGFGFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQRVP-- 224
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDT 351
VA+VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDT
Sbjct: 225 ----YRAVALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAISLPHGGKAMLSDT 280
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E
Sbjct: 281 VGFISNLPTQLVAAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLSQLGIDPEAT 340
Query: 412 KNMIEVWNKIDYHDE 426
++IEVWNKID DE
Sbjct: 341 DSIIEVWNKIDRLDE 355
>gi|374291860|ref|YP_005038895.1| putative GTP-binding protein (HflX-like) [Azospirillum lipoferum
4B]
gi|357423799|emb|CBS86659.1| Putative GTP-binding protein (HflX-like) [Azospirillum lipoferum
4B]
Length = 409
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 204/358 (56%), Gaps = 49/358 (13%)
Query: 71 LKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFF 130
++PP +++L EA+ LA +++ D V+ K + + T
Sbjct: 1 MRPP---ESRLEEAIGLAQAIQ-----------LD-------VIHAECAKVNRPQPSTLL 39
Query: 131 GPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAH 190
G GTVE H+ + E + ++ LS +QQRNLERA V+DR GLI+EIF A
Sbjct: 40 GSGTVE----HLAEVVEENEATLVILDHALSPVQQRNLERALKAKVIDRTGLILEIFGAR 95
Query: 191 AHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAG 250
A T+E LQ ELA+L Y+KSRLVR T E R GG GF+ G G
Sbjct: 96 ARTREGMLQVELASLTYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPG 138
Query: 251 ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGK 310
E++L+L RR I +R + ++EEVRRTR + R AR + VA+VGYTNAGK
Sbjct: 139 ESQLELDRRLIGDRIIKIKKELEEVRRTRGLHRKARAK------VPYPVVALVGYTNAGK 192
Query: 311 STLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHAT 369
STL + L+++D+F+ LFATLDP ++ V LPSG KV+LSDTVGFISDLP LV AF AT
Sbjct: 193 STLFNRLANADVFAQNLLFATLDPTMRQVTLPSGRKVILSDTVGFISDLPHGLVAAFRAT 252
Query: 370 LEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
LEEV AD+++HV D + + + V +VL +G+ E +IEV NKID D E
Sbjct: 253 LEEVDAADIILHVRDIAHIDSDAQKADVHEVLSDMGIDPETDDRVIEVLNKIDALDGE 310
>gi|395787708|ref|ZP_10467300.1| GTP-binding protein HflX [Bartonella birtlesii LL-WM9]
gi|395410330|gb|EJF76885.1| GTP-binding protein HflX [Bartonella birtlesii LL-WM9]
Length = 447
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 207/395 (52%), Gaps = 46/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + ++ K R T FG G V+ + +IN K + V+ L+ IQQRNLE+ W
Sbjct: 60 IVHHEAVNIVKLRPATLFGKGKVDALAYYINEYHIK----LVIVDYFLTPIQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGERARTKEGILQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ +R + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADKRLLQEKIVRIRRELETVIKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ V LP GK +LLSDT
Sbjct: 219 ------VVALVGYTNTGKSTLFNRLSGADVLAKDMLFATLDPTLRKVALPHGKTILLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEV+EADL++HV D + + H VL+VL + +
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVIEADLILHVRDMSDFSHHAHAQDVLKVLSGLDIDINDT 332
Query: 412 KNMIEVWNKIDYHDEEMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVD 456
+++IEVWNKID DE+ + V + + + A +K E
Sbjct: 333 EHIIEVWNKIDLLDEQALNVLQTSAKTRLNPAIMVSALMNEGLDQLLIAIEKRIFGEMQK 392
Query: 457 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 491
VEC+ + D F E+ G+ + K HND S
Sbjct: 393 VECL--LRPHEMSLIDWF-YENSGKIIQKGHNDGS 424
>gi|381169137|ref|ZP_09878311.1| putative GTP-binding protein (hflX) [Phaeospirillum molischianum
DSM 120]
gi|380681751|emb|CCG43133.1| putative GTP-binding protein (hflX) [Phaeospirillum molischianum
DSM 120]
Length = 451
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 205/351 (58%), Gaps = 46/351 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E P V P R T G G VE
Sbjct: 46 EARLAEAIGLAQAI--------DLDIVLAEAVP---VPRP-------RPATLLGKGAVER 87
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ I AE + +++ L+ +QQRNLE+AWG V+DR GLI+EIF A A T+E
Sbjct: 88 LADAIADAE----ITLAVIDSPLTPVQQRNLEKAWGCKVIDRTGLILEIFGARARTREGT 143
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELAAL Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 144 LQVELAALSYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 186
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I +R L ++++V+RTR + R ARRR VA+VGYTNAGKSTL + +
Sbjct: 187 RRMIGDRIVKLERELDDVKRTRDLHRKARRRVP------YPIVALVGYTNAGKSTLFNTI 240
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ +++ + LFATLDP ++++ LPSG KV+LSDTVGFISDLP +LV AF ATLEEV+EA
Sbjct: 241 TRAEVMAKDMLFATLDPTMRTLDLPSGRKVILSDTVGFISDLPHELVAAFRATLEEVLEA 300
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
D++VHV D + P+ E V VL+++G+ E ++E NKID D E
Sbjct: 301 DVVVHVRDISHPDSEAQAADVEAVLRELGLEEMVDNGLVEGLNKIDLLDAE 351
>gi|126736284|ref|ZP_01752026.1| GTP-binding protein HflX [Roseobacter sp. CCS2]
gi|126714105|gb|EBA10974.1| GTP-binding protein HflX [Roseobacter sp. CCS2]
Length = 412
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 191/311 (61%), Gaps = 35/311 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V+ P + GK FG G + +K + AE ++ + ++ ++ +QQRNLE+ W
Sbjct: 39 IVRLPRIHPGK-----LFGKGKIAELKQVFHDAE----VELVLIDGPVTPVQQRNLEKEW 89
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G +LDR GLI+EIF+ A T E LQ E+AAL Y+++RLVR
Sbjct: 90 GVKLLDRTGLILEIFSDRARTSEGVLQVEMAALSYQRTRLVRAW---------------- 133
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+ R GG GF+ G GET+++ RR I E+ + L Q+ +V +TR + RA+R +
Sbjct: 134 -THLERQRGGLGFVGGPGETQIEADRRAIDEQLNRLRKQLAKVVKTRELHRASRAK---- 188
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
VA+VGYTNAGKSTL + L+ + +F+ LFATLDP ++ +VLP+G +V++SDT
Sbjct: 189 --VPFPIVALVGYTNAGKSTLFNRLTGAQVFAKDMLFATLDPTMRKIVLPTGDEVIMSDT 246
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFISDLP +LV AF ATLEEV++ADL+VHV D + P EE V +LQ +GV+EE
Sbjct: 247 VGFISDLPTELVAAFRATLEEVLDADLIVHVRDISHPQTEEQAEDVHAILQSLGVAEE-- 304
Query: 412 KNMIEVWNKID 422
+IEVWNK D
Sbjct: 305 APIIEVWNKTD 315
>gi|255263172|ref|ZP_05342514.1| GTP-binding protein HflX [Thalassiobium sp. R2A62]
gi|255105507|gb|EET48181.1| GTP-binding protein HflX [Thalassiobium sp. R2A62]
Length = 452
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/318 (41%), Positives = 199/318 (62%), Gaps = 30/318 (9%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
+ LP VV + ++ KA FG G + +K ++ AE +D + ++ ++ +QQ
Sbjct: 43 RALPNLVVQGDEVVRLPKAHPGMLFGSGKIAEVKERLHDAE----VDLVLIDGPVTPVQQ 98
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+ WG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 99 RNLEKEWGVKLLDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHL 152
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I ++ L Q+ +V +TRA+ R+A
Sbjct: 153 E-----------RQRGGLGFVGGPGETQIEADRRAIDDQLVRLRKQLGKVEKTRALHRSA 201
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG- 344
R + VA+VGYTNAGKSTL + L+ +++F+ LFATLDP ++ V LP+G
Sbjct: 202 RAKV------PFPIVALVGYTNAGKSTLFNRLTGAEVFAKDMLFATLDPTMRKVDLPTGD 255
Query: 345 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 404
+++LSDTVGFISDLP +LV +F ATLEEV++ADL++HV D ++ + E V+++L ++
Sbjct: 256 EIILSDTVGFISDLPTELVASFRATLEEVLDADLILHVRDISSADTHEQSRDVMEILTKL 315
Query: 405 GVSEEKLKNMIEVWNKID 422
GV ++ ++EVWNKID
Sbjct: 316 GVGQD--APLLEVWNKID 331
>gi|456355449|dbj|BAM89894.1| putative GTP-binding protein, HflX [Agromonas oligotrophica S58]
Length = 413
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 186/303 (61%), Gaps = 28/303 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G V+ I G + ++ + ++ LS IQQRNLE+AW VLDR GLI+
Sbjct: 34 RPATYLGKGKVD----EIGGVIASHGVELVVMDCALSPIQQRNLEKAWNTKVLDRTGLIL 89
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y++SRLVR T E R GG G
Sbjct: 90 EIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 132
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R + L ++I++V+ TR + RA R+R VA+VG
Sbjct: 133 FMGGPGETQIEADRRLIGDRITRLENEIKKVQATRRLHRAGRQR------VPYRVVALVG 186
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP QLV
Sbjct: 187 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAIALPHGGKAMLSDTVGFISNLPTQLV 246
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E +IEVWNKID
Sbjct: 247 AAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLSQLGIDPEATDTIIEVWNKIDR 306
Query: 424 HDE 426
DE
Sbjct: 307 LDE 309
>gi|84501097|ref|ZP_00999332.1| GTP-binding protein HflX [Oceanicola batsensis HTCC2597]
gi|84391164|gb|EAQ03582.1| GTP-binding protein HflX [Oceanicola batsensis HTCC2597]
Length = 424
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/319 (44%), Positives = 195/319 (61%), Gaps = 31/319 (9%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
+ LP VV + ++ T FG G V + A++K EL + V+ ++ +QQ
Sbjct: 39 RALPGLEVVGSSIVRLANPTPATLFGSGKVAELSAFF--ADNKVEL--VLVDGPVTPVQQ 94
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 95 RNLEKAWGGKLLDRTGLILEIFSDRARTREGVLQVEMAALAYQRTRLVRA------WTHL 148
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I E+ + L Q+E+V RTR + RAA
Sbjct: 149 E-----------RQRGGLGFVGGPGETQIEADRRAIDEQLTRLRRQLEKVVRTRELHRAA 197
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG- 344
R R VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP+
Sbjct: 198 RARVP------FPIVALVGYTNAGKSTLFNRLTGAEVLAKDMLFATLDPTMRRVRLPNNG 251
Query: 345 -KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 403
+V+LSDTVGFISDLP QLV AF ATLEEV+EADL++H+ D + P EE + V +L
Sbjct: 252 PEVILSDTVGFISDLPTQLVAAFRATLEEVLEADLILHIRDISHPEAEEQKADVEDILSD 311
Query: 404 VGVSEEKLKNMIEVWNKID 422
+G+ EE ++EVWNK+D
Sbjct: 312 LGLPEE--VPVLEVWNKVD 328
>gi|114775684|ref|ZP_01451252.1| GTPase [Mariprofundus ferrooxydans PV-1]
gi|114553795|gb|EAU56176.1| GTPase [Mariprofundus ferrooxydans PV-1]
Length = 433
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/311 (45%), Positives = 186/311 (59%), Gaps = 28/311 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + L KA A T G G VE I + E+ D +FV+ LS +QQRNLE AW
Sbjct: 49 IVASQRLSVRKAAAATLLGQGQVEEIARQVEILEA----DVVFVDHPLSPVQQRNLETAW 104
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A T+E LQ ELA+L Y+ RLVR T E
Sbjct: 105 NAKVVDRTGLILEIFAARARTREGVLQVELASLNYQLGRLVR------SWTHLE------ 152
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GE +++L RR I L + +V+R RA QR+ R+R
Sbjct: 153 -----RQRGGFGFMGGPGERQIELDRRMIRNSIGALERDLAKVKRMRATQRSGRQR---- 203
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
+ + TVA+VGYTNAGKSTL + L+ SD+F +LFATLDP L+ + LP G +++LSDT
Sbjct: 204 --KDIPTVALVGYTNAGKSTLFNRLTTSDVFVANQLFATLDPTLRLLELPGGLRLMLSDT 261
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+ +LP +LVDAF ATLEEV+EADL++HV D + P EH V LQQ+GV +
Sbjct: 262 VGFVQELPHELVDAFRATLEEVIEADLILHVRDASDPMQAEHAKVVHDTLQQLGVVGDGA 321
Query: 412 KNMIEVWNKID 422
++E+ NK D
Sbjct: 322 PQVVEILNKKD 332
>gi|451942080|ref|YP_007462717.1| GTP-binding protein HflX [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
gi|451901467|gb|AGF75929.1| GTP-binding protein HflX [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
Length = 447
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 213/395 (53%), Gaps = 46/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T FG G V+++ +I S+ ++ + V+ L+ +QQRNLE+ W
Sbjct: 60 VVYYEAINITTLRPATLFGKGKVDSLAHYI----SEYYVELVVVDYFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 KCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE------ 163
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + + + + ++E V +TRA+ RA R++
Sbjct: 164 -----RQRGGHGFLGGPGETQVEADRRLLQGKITRIRRELETVTKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ V+LP GK +LL DT
Sbjct: 219 ------VVALVGYTNTGKSTLFNRLSGADVLAKDMLFATLDPALRKVILPHGKTILLFDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEVVEADL++HV D + + H VL+VL +G+ +
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVVEADLILHVRDMSDFDHRAHAKDVLEVLSSLGIDIDDT 332
Query: 412 KNMIEVWNKIDYHDEEMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVD 456
+++IEVWNKID DE + V + D + A +K E +
Sbjct: 333 EHIIEVWNKIDILDEHALNVLQTSTKTRLNPAVMVSALMSDGLDQLLTAIEKRIFGEMQN 392
Query: 457 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 491
VEC+ + D F GE M + H D S
Sbjct: 393 VECL--LKPHEMPLIDWFYKNS-GEIMQEGHEDGS 424
>gi|75675642|ref|YP_318063.1| HSR1-like GTP-binding protein [Nitrobacter winogradskyi Nb-255]
gi|74420512|gb|ABA04711.1| GTP-binding protein HflX [Nitrobacter winogradskyi Nb-255]
Length = 442
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 190/314 (60%), Gaps = 28/314 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V+Q + R T+ G G VE ++ I A+ G + ++ LS IQQRNLE+AW
Sbjct: 51 VIQAIVAPVSQIRPATYLGKGKVEELQGLI-AADGAG---LVVMDCALSPIQQRNLEKAW 106
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDR GLI+EIF A TKE LQ ELA L Y++SRLVR T E
Sbjct: 107 STKVLDRTGLILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE------ 154
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R
Sbjct: 155 -----RQRGGFGFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQRVP-- 207
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDT 351
VA+VGYTNAGKSTL + L+ +D+ + LFATLDP L+S+ LP GK +LSDT
Sbjct: 208 ----YRVVALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRSLALPHGGKAMLSDT 263
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ +
Sbjct: 264 VGFISNLPTQLVAAFRATLEEVMEADVILHVRDISHEDTEPQQHDVEAVLHQLGIDPDGP 323
Query: 412 KNMIEVWNKIDYHD 425
MIEVWNKID D
Sbjct: 324 ARMIEVWNKIDRFD 337
>gi|85715518|ref|ZP_01046499.1| GTP-binding protein, [Nitrobacter sp. Nb-311A]
gi|85697713|gb|EAQ35589.1| GTP-binding protein, [Nitrobacter sp. Nb-311A]
Length = 457
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 190/316 (60%), Gaps = 32/316 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLER 170
VVQ + R T+ G G VE +K I +GA + ++ LS +QQRNLE+
Sbjct: 66 VVQAIVAPVSQIRPATYLGKGKVEELKGLIAADGA------SLVVMDCTLSPVQQRNLEK 119
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
AWG VLDR GLI+EIF A TKE LQ ELA L Y++SRLVR T E
Sbjct: 120 AWGTKVLDRTGLILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE---- 169
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
R GG GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R
Sbjct: 170 -------RQRGGFGFMGGPGETQIEADRRLIGDRIARLENELKKVQATRRLHRAGRQRVP 222
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLS 349
VA+VGYTNAGKSTL + L+ +D+ + LFATLDP L+S+ LP GK +LS
Sbjct: 223 ------YRVVALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRSLALPHGGKAMLS 276
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGFIS+LP QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+
Sbjct: 277 DTVGFISNLPTQLVAAFRATLEEVMEADIILHVRDISHEDTEPQQHDVEAVLHQLGIERG 336
Query: 410 KLKNMIEVWNKIDYHD 425
++EVWNKID D
Sbjct: 337 GAARILEVWNKIDRFD 352
>gi|86749994|ref|YP_486490.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris HaA2]
gi|86573022|gb|ABD07579.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris HaA2]
Length = 457
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 203/350 (58%), Gaps = 47/350 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA LA ++ D + + L P + R T+ G G VE I
Sbjct: 51 ARLDEAAGLARAI--------DLEIAEAVLTP----------ISQIRPATYLGKGKVEEI 92
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
I G E+ D + ++ LS IQQRNLE+AW VLDR GLI+EIF A TKE L
Sbjct: 93 LGIIKGHEA----DLVVMDCALSPIQQRNLEKAWSAKVLDRTGLILEIFGRRAKTKEGAL 148
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y++SRLVR T E R GG GF+ G GET+++ R
Sbjct: 149 QVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEADR 191
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I +R S L +++++V+ TR + RA R+R VA+VGYTNAGKSTL + L+
Sbjct: 192 RLIGDRISRLENELKKVQATRRLHRAGRQRV------PYRVVALVGYTNAGKSTLFNRLT 245
Query: 319 DSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 377
+D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP QLV AF ATLEEV+EAD
Sbjct: 246 RADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEAD 305
Query: 378 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
L++HV D + + E V VL+Q+GV E ++E+WNKID + E
Sbjct: 306 LILHVRDISHEDAEAQERDVDAVLRQLGV-EADGGRILEIWNKIDRFEPE 354
>gi|338974519|ref|ZP_08629877.1| GTP-binding protein HflX [Bradyrhizobiaceae bacterium SG-6C]
gi|338232114|gb|EGP07246.1| GTP-binding protein HflX [Bradyrhizobiaceae bacterium SG-6C]
Length = 436
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/304 (45%), Positives = 187/304 (61%), Gaps = 28/304 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE + I ++D + ++ LS +QQRNLE+ W VLDR GLI+
Sbjct: 57 RPATYLGKGKVEEMLGLIKA----NDVDLVVMDCALSPVQQRNLEKEWKAKVLDRTGLIL 112
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 113 EIFGRRAKTREGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 155
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER S + S++++V+ TR + RA R+R VA+VG
Sbjct: 156 FMGGPGETQIEADRRMISERISKIESELKKVQATRRLHRAGRQRVP------YRVVALVG 209
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFISDLP LV
Sbjct: 210 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISDLPTMLV 269
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EAD+++HV D + + E + V VL+Q+G+ + + ++EVWNKID
Sbjct: 270 AAFRATLEEVIEADVILHVRDISHEDAEAQQHDVEGVLRQLGIDTDGGQRILEVWNKIDR 329
Query: 424 HDEE 427
DEE
Sbjct: 330 FDEE 333
>gi|372281079|ref|ZP_09517115.1| small GTP-binding protein [Oceanicola sp. S124]
Length = 424
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/371 (40%), Positives = 214/371 (57%), Gaps = 50/371 (13%)
Query: 61 PPRLFLVQPRLKPPTFLQA---KLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R F++ P K A L EA+ LA++L P VV +
Sbjct: 8 PTRAFVIHPEFKGEEARHAPLYALAEAVSLAHAL-----------------PGLEVVGDQ 50
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
++ + T FG G VE +K + AE++ EL + ++ +S QQ+NLE+AW +L
Sbjct: 51 LVRISTVQPKTLFGKGKVEELKQTL--AEAEAEL--VLIDGPVSPKQQQNLEKAWNVKIL 106
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF+ A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 107 DRTGLILEIFSDRARTREGVLQVELAALGYQRTRLVRA------WTHLE----------- 149
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RA+R +
Sbjct: 150 RQRGGLGFVGGPGETQIEADRRAIDEQMVRLRRQLDKVVKTRELHRASRAKVP------F 203
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFIS 356
VA+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ V L +G +++LSDTVGFIS
Sbjct: 204 PIVALVGYTNAGKSTLFNLLTGADVLAKDMLFATLDPTMRRVKLETGAEIILSDTVGFIS 263
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
DLP QLV AF ATLEEV+EADL++HV D + P E + V ++L ++G+ EE ++E
Sbjct: 264 DLPHQLVAAFRATLEEVLEADLVLHVRDISHPETREQKADVEEILAELGLREE--VPVLE 321
Query: 417 VWNKIDYHDEE 427
VWNKID EE
Sbjct: 322 VWNKIDLLPEE 332
>gi|146277534|ref|YP_001167693.1| HSR1-like GTP-binding protein [Rhodobacter sphaeroides ATCC 17025]
gi|145555775|gb|ABP70388.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC
17025]
Length = 448
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/319 (44%), Positives = 188/319 (58%), Gaps = 35/319 (10%)
Query: 105 DKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQ 164
D E+ H VV+ P + G FG G V +K E + + V+ +S +Q
Sbjct: 67 DMEIVGHEVVRLPRAQPG-----LLFGTGKVAEMKTRFEALE----VGLVLVDGPVSPVQ 117
Query: 165 QRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTF 224
QRNLE+ WG +LDR GLI+EIF A T+E LQ ELAAL Y+++RLVR T
Sbjct: 118 QRNLEKEWGVKLLDRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRA------WTH 171
Query: 225 GETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRA 284
E R GG GF+ G GET+++ RR I E+ + Q+++V RTR + RA
Sbjct: 172 LE-----------RQRGGFGFVGGPGETQIEADRRAIDEQVIRIRRQLDKVVRTRELHRA 220
Query: 285 ARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG 344
+RR+ VA+VGYTNAGKSTL + ++ +++ + LFATLDP ++ V LPSG
Sbjct: 221 SRRKVP------FPIVALVGYTNAGKSTLFNRMTGAEVLAKDMLFATLDPTMRGVTLPSG 274
Query: 345 -KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 403
KV+LSDTVGFISDLP QLV AF ATLEEV+EADL++HV D P E V ++LQ
Sbjct: 275 RKVILSDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQS 334
Query: 404 VGVSEEKLKNMIEVWNKID 422
+GV + EVWNK+D
Sbjct: 335 LGV--KGATPQYEVWNKLD 351
>gi|91977066|ref|YP_569725.1| HSR1-like GTP-binding protein [Rhodopseudomonas palustris BisB5]
gi|91683522|gb|ABE39824.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris
BisB5]
Length = 434
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 203/350 (58%), Gaps = 47/350 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA LA ++ D + + L P + R T+ G G VE I
Sbjct: 28 ARLDEAAGLARAI--------DLEIAEAVLTP----------ISQIRPATYLGKGKVEEI 69
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
I G E+ D + ++ LS IQQRNLE+AWG VLDR GLI+EIF A TKE L
Sbjct: 70 LGIIKGHEA----DLVVMDCALSPIQQRNLEKAWGAKVLDRTGLILEIFGRRAKTKEGSL 125
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y++SRLVR T E R GG GF+ G GET+++ R
Sbjct: 126 QVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEADR 168
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I +R + L +++++V+ TR + RA R+R VA+VGYTNAGKSTL + L+
Sbjct: 169 RLIGDRITRLENELKKVQATRRLHRAGRQRV------PYRVVALVGYTNAGKSTLFNRLT 222
Query: 319 DSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 377
+D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP QLV AF ATLEEV+EAD
Sbjct: 223 RADVQAADMLFATLDPTLRALSLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEAD 282
Query: 378 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
L++HV D + E V VL+Q+GV E ++E+WNKID + E
Sbjct: 283 LILHVRDIAHEDAEAQDRDVDAVLRQLGV-EADSGRILEIWNKIDRFEPE 331
>gi|190891663|ref|YP_001978205.1| GTP-binding protein [Rhizobium etli CIAT 652]
gi|190696942|gb|ACE91027.1| GTP-binding protein [Rhizobium etli CIAT 652]
Length = 441
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 165/434 (38%), Positives = 233/434 (53%), Gaps = 79/434 (18%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGQVVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +G+ + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLD----EGDSGLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRLLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD--- 430
EADL++HV D + P+ + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAGKRLIEVWNKIDRLESEVHDAMV 340
Query: 431 -----------VEYIDG-------DDIS-NFSRAEDKDTTSEPVDVECIDNYGGDDA--- 468
V + G D+IS S + T PVD + + D A
Sbjct: 341 QKAAGASNVVAVSAVSGEGVDTLMDEISRRLSGVMTETTIRLPVDKLALLPWLYDHAIVD 400
Query: 469 ---DNNDGFVSEDL 479
DN DG ++ DL
Sbjct: 401 GREDNEDGSITLDL 414
>gi|83952201|ref|ZP_00960933.1| GTP-binding protein HflX [Roseovarius nubinhibens ISM]
gi|83837207|gb|EAP76504.1| GTP-binding protein HflX [Roseovarius nubinhibens ISM]
Length = 425
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 191/322 (59%), Gaps = 31/322 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV + ++ K FG G +E +K + E+D + ++ ++ +QQRN
Sbjct: 41 LPGLDVVGSEIVRLPKPHPGALFGSGKIEELKARLEA----NEVDLVLIDGPVTPVQQRN 96
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 97 LEKAWGLKLLDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHLE- 149
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I ++ L Q+E+V +TR + RAAR
Sbjct: 150 ----------RQRGGLGFVGGPGETQIEADRRAIDDQLVRLRRQLEKVVKTRTLHRAARA 199
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG--K 345
+ VA+VGYTNAGKSTL + L+ SD+ + LFATLDP ++ V LP G
Sbjct: 200 KV------PFPIVALVGYTNAGKSTLFNRLTGSDVMAKDMLFATLDPTMRKVSLPHGGPD 253
Query: 346 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 405
V+LSDTVGFISDLP +LV AF ATLEEVV ADL+VHV D + P EE V +L+ +
Sbjct: 254 VILSDTVGFISDLPTELVAAFRATLEEVVSADLVVHVRDISHPETEEQARDVEAILESLD 313
Query: 406 VSEEKLKNMIEVWNKIDYHDEE 427
V+E + IE+WNK D D E
Sbjct: 314 VAEGTPR--IELWNKADLLDPE 333
>gi|395784503|ref|ZP_10464341.1| GTP-binding protein HflX [Bartonella melophagi K-2C]
gi|395423753|gb|EJF89947.1| GTP-binding protein HflX [Bartonella melophagi K-2C]
Length = 446
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 203/356 (57%), Gaps = 46/356 (12%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVE 136
+ +++ EAL LA+++E Y + PH PS T FG G V
Sbjct: 42 IDSRIKEALGLAHAIELDIIHYETVNIS----TPH-----PS---------TLFGVGKVG 83
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
+I S+ + V+ +L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 84 AFADYI----SENHIALAVVDHVLTPVQQRNLEKLWSCKVIDRTGLILEIFGRRARTKEG 139
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ ELA L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 140 KLQVELAHLSYQKSRLVR------SWTHLE-----------RQRGGSGFLGGPGETQIES 182
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR + ++ + + +++ V +TRA+ RA R++ VA+VGYTNAGKSTL +
Sbjct: 183 DRRLLQDKITRIRRELKNVVKTRALHRAKRKKTSH------PVVALVGYTNAGKSTLFNR 236
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVE 375
LSD+ + + LFATLDP L+ V+LP G+ + LSDTVGFIS+LP L+ AF ATLEEV+E
Sbjct: 237 LSDAGVLTKDMLFATLDPTLRKVILPHGQTIFLSDTVGFISNLPTHLIAAFKATLEEVIE 296
Query: 376 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDV 431
ADL++HV D + P+ VL++L +GV+ +++EVWNK D DE +V
Sbjct: 297 ADLIIHVKDISDPDHRAQAQDVLEILSSLGVNIGNTDHIVEVWNKADMLDEHTLNV 352
>gi|118589883|ref|ZP_01547287.1| GTP binding protein-like [Stappia aggregata IAM 12614]
gi|118437380|gb|EAV44017.1| GTP binding protein-like [Stappia aggregata IAM 12614]
Length = 426
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 138/299 (46%), Positives = 181/299 (60%), Gaps = 28/299 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V + G + +LD + ++ L+ +QQRNLER V+DR GLI+EIF
Sbjct: 57 TLFGDGKV----AELAGIVASEDLDLVVIDHPLTPVQQRNLERRLKTKVIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKE +LQ +LA L ++KSRLVR T E R GG GF+
Sbjct: 113 GDRARTKEGRLQVDLAHLTWQKSRLVR------SWTHLE-----------RQRGGAGFMG 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR+I +R L Q+E+VRRTR + R R++ VA+VGYTN
Sbjct: 156 GPGETQIEADRRQIQDRIIALQKQLEQVRRTRDLHRKKRKKIPQP------VVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
AGKSTL + +++SD+F+ LFATLDP L+ V LP GK ++LSDTVGFISDLP LV AF
Sbjct: 210 AGKSTLFNRMTESDVFAKDLLFATLDPTLRKVALPHGKEIILSDTVGFISDLPTHLVAAF 269
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
ATLEEV+EADL++HV D + P+ E V + L +GV +IEVWNKID D
Sbjct: 270 RATLEEVLEADLILHVRDISHPDTEAQAEDVKKTLTDLGVDALTGAPIIEVWNKIDCLD 328
>gi|365888714|ref|ZP_09427459.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. STM 3809]
gi|365335599|emb|CCD99990.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. STM 3809]
Length = 459
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/306 (46%), Positives = 188/306 (61%), Gaps = 28/306 (9%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
G+ R T+ G G V+ I I A EL + ++ LS IQQRNLE+AW VLDR G
Sbjct: 77 GQIRPATYLGKGKVDEIAGVI--ASQGAEL--VVMDCALSPIQQRNLEKAWNTKVLDRTG 132
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A TKE LQ ELA L Y++SRLVR T E R G
Sbjct: 133 LILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRG 175
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R VA
Sbjct: 176 GFGFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQRVP------YRVVA 229
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPL 360
+VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP
Sbjct: 230 LVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNLPT 289
Query: 361 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 420
QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E +IEVWNK
Sbjct: 290 QLVAAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLSQLGIDPEATDTIIEVWNK 349
Query: 421 IDYHDE 426
ID D+
Sbjct: 350 IDRLDD 355
>gi|209549232|ref|YP_002281149.1| GTP-binding proten HflX [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534988|gb|ACI54923.1| GTP-binding proten HflX [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 441
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 51/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVTGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK +N +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLNERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 430
EADL++HV D + P+ + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAAKRLIEVWNKIDRLEPEVHD 337
>gi|148255461|ref|YP_001240046.1| GTP-binding protein (hflX) [Bradyrhizobium sp. BTAi1]
gi|146407634|gb|ABQ36140.1| GTP-binding protein HflX [Bradyrhizobium sp. BTAi1]
Length = 459
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 140/306 (45%), Positives = 187/306 (61%), Gaps = 28/306 (9%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
+ R T+ G G V+ I I G + + + ++ LS IQQRNLE+AW VLDR G
Sbjct: 77 AQIRPATYLGKGKVDEIAGVIAGQGA----ELVVMDCALSPIQQRNLEKAWNTKVLDRTG 132
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A TKE LQ ELA L Y++SRLVR T E R G
Sbjct: 133 LILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRG 175
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G GF+ G GET+++ RR I +R + L +++++V+ TR + RA R+R VA
Sbjct: 176 GFGFMGGPGETQIEADRRLIGDRITRLENELKKVQATRRLHRAGRQR------VPYRVVA 229
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPL 360
+VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP
Sbjct: 230 LVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAITLPHGGKAMLSDTVGFISNLPT 289
Query: 361 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 420
QLV AF ATLEEV+EAD+++HV D + + E + V VL Q+G+ E +IEVWNK
Sbjct: 290 QLVAAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLGQLGIDPEATDTIIEVWNK 349
Query: 421 IDYHDE 426
ID DE
Sbjct: 350 IDRLDE 355
>gi|254504147|ref|ZP_05116298.1| GTP-binding proten HflX [Labrenzia alexandrii DFL-11]
gi|222440218|gb|EEE46897.1| GTP-binding proten HflX [Labrenzia alexandrii DFL-11]
Length = 431
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 189/316 (59%), Gaps = 28/316 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + ++ + T FG G V + G + +LD + ++ LS +QQRNLER
Sbjct: 42 IVHSGVVRINNPKPATLFGEGKV----AELAGIVASEDLDLVVIDHPLSPVQQRNLERRL 97
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE KLQ +LA L ++KSRLVR T E
Sbjct: 98 KTKVIDRTGLILEIFGDRARTKEGKLQVDLAHLTWQKSRLVR------SWTHLE------ 145
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR+I ER L Q+E VRRTR + R R++
Sbjct: 146 -----RQRGGAGFMGGPGETQIEADRRQIQERIIALQKQLESVRRTRELHRKKRKKIPQP 200
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKSTL + L++S++F+ LFATLDP L+ + LP G+ ++LSDT
Sbjct: 201 ------VVALVGYTNAGKSTLFNRLTESEVFAKDLLFATLDPTLRKITLPHGREIILSDT 254
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFISDLP LV AF ATLEEV+EADL++HV D + + + V + L+++GV
Sbjct: 255 VGFISDLPTHLVAAFRATLEEVLEADLILHVRDISHADTDAQAEDVQKTLEELGVDALTG 314
Query: 412 KNMIEVWNKIDYHDEE 427
+IEVWNKID D++
Sbjct: 315 APIIEVWNKIDLLDKD 330
>gi|392377300|ref|YP_004984459.1| putative GTP-binding protein (hflX) [Azospirillum brasilense Sp245]
gi|356878781|emb|CCC99673.1| putative GTP-binding protein (hflX) [Azospirillum brasilense Sp245]
Length = 468
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 147/345 (42%), Positives = 199/345 (57%), Gaps = 46/345 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA+ LA ++ + PH V ++ + T FG GT + I
Sbjct: 59 ARLSEAIALAQAIRLE--------------VPHAEV----IRVARPDPATLFGRGTADRI 100
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
+ + D + ++ LS +QQRNLER V+DR GLI+EIF AHT+E +L
Sbjct: 101 GGMVEAFHA----DLVVIDHPLSPVQQRNLERRCMAKVIDRTGLILEIFGERAHTREGQL 156
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELAAL Y++SRLVR T E R GG GF+ G GE++L+L R
Sbjct: 157 QVELAALTYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGESQLELDR 199
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I ER S L S +EEVRRTR + R+AR+R GG+ VA+VGYTNAGKSTL + LS
Sbjct: 200 RLIAERISRLKSDLEEVRRTRKLHRSARQR-GGT-----PLVALVGYTNAGKSTLFNRLS 253
Query: 319 DSDLFSDARLFATLDPRLKSVVLPSGKVL-LSDTVGFISDLPLQLVDAFHATLEEVVEAD 377
+ + ++ LFATLDP ++ + L SGK + LSDTVGF+S+LP QLV AF ATLEEV AD
Sbjct: 254 GAGVTAEDMLFATLDPTVRRIALSSGKTMALSDTVGFVSELPTQLVAAFRATLEEVQAAD 313
Query: 378 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
L++HV D + P+ + V VL +G+ ++EV NK D
Sbjct: 314 LILHVRDVSHPDTAAQKADVDSVLADLGIDAANDPRVVEVLNKTD 358
>gi|319898998|ref|YP_004159091.1| GTP-binding protein HflX [Bartonella clarridgeiae 73]
gi|319402962|emb|CBI76513.1| GTP-binding protein HflX [Bartonella clarridgeiae 73]
Length = 444
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 182/303 (60%), Gaps = 28/303 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
+ T F G V +I S+ + V+ L+ +QQRNLE+ W V+DR LI+E
Sbjct: 74 SSTLFRIGKVNKFAHYI----SEHHITLAIVDHFLTPVQQRNLEKLWNCKVIDRTALILE 129
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A TKE LQ ELA L Y+KSRLVR T E R GG GF
Sbjct: 130 IFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE-----------RQRGGSGF 172
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+++ RR + + + ++E V +TRA+ RA R++ +A+VGY
Sbjct: 173 LGGPGETQIEADRRLLQNKIIRIRRELETVVKTRALHRAKRKK------IPYPVIALVGY 226
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + LSDS++ ++ LFATLDP L+ +VLP G KVLLSDTVGFIS+LP L+
Sbjct: 227 TNAGKSTLFNHLSDSNVLAEDMLFATLDPTLRKIVLPHGQKVLLSDTVGFISNLPTHLIA 286
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATLEEV+EADL++HV D + P+ H VL++L +GV + +++E+WNKID
Sbjct: 287 AFRATLEEVIEADLILHVRDVSDPDHYAHAQDVLKILSSLGVDINDMDHIVEIWNKIDVL 346
Query: 425 DEE 427
D+
Sbjct: 347 DQH 349
>gi|319408442|emb|CBI82097.1| GTP-binding protein HflX [Bartonella schoenbuchensis R1]
Length = 453
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 186/320 (58%), Gaps = 28/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V ++ T FG G V+ +I S+ + ++ +L+ +QQRNLE+ W
Sbjct: 60 IVHYETINISTPHPSTLFGVGKVDAFADYI----SEHHIALAIIDHVLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE KLQ ELA L Y+KSRLVR T E
Sbjct: 116 SCKVIDRTALILEIFGRRARTKEGKLQVELAHLSYQKSRLVR------SWTHLE------ 163
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + ++ + + ++E V +TRA+ RA R++
Sbjct: 164 -----RQRGGSGFLGGPGETQIETDRRLLQDKITRIRRELENVVKTRALHRAKRKKTSH- 217
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKSTL + LSD+ + + LFATLDP L+ V+LP G+ + LSDT
Sbjct: 218 -----PVVALVGYTNAGKSTLFNRLSDAGVLTKDMLFATLDPTLRKVILPHGQTIFLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEV+EADL++HV D + P+ VL++L +GV
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVIEADLIIHVKDISDPDHRAQAQDVLEILSSLGVDIGNT 332
Query: 412 KNMIEVWNKIDYHDEEMGDV 431
++EVWNK D DE +V
Sbjct: 333 DRIVEVWNKADMLDEHTLNV 352
>gi|192291246|ref|YP_001991851.1| GTP-binding proten HflX [Rhodopseudomonas palustris TIE-1]
gi|192284995|gb|ACF01376.1| GTP-binding proten HflX [Rhodopseudomonas palustris TIE-1]
Length = 455
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 202/353 (57%), Gaps = 47/353 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA LA ++ D D + L P + R T+ G G VE I
Sbjct: 49 ARLDEAAGLARAI--------DLDVVEAVLTP----------ISQIRPATYLGKGKVEEI 90
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
I + D I ++ LS IQQRNLE+AW VLDR GLI+EIF A T+E L
Sbjct: 91 VGLIAAHGA----DLIVMDCALSPIQQRNLEKAWNAKVLDRTGLILEIFGRRAKTREGTL 146
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y++SRLVR T E R GG GF+ G GET+++ R
Sbjct: 147 QVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEADR 189
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I ER + L +++++V+ TR + RA R+R VA+VGYTNAGKSTL + L+
Sbjct: 190 RLIGERITKLEAELKKVQATRRLHRAGRQRV------PYRVVALVGYTNAGKSTLFNRLT 243
Query: 319 DSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 377
+D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP QLV AF ATLEEV+EAD
Sbjct: 244 RADVQAADMLFATLDPTLRAIQLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEAD 303
Query: 378 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGD 430
L++HV D + + E + V VL+Q+GV ++EVWNKID + E D
Sbjct: 304 LILHVRDISHEDAEAQQHDVDNVLRQLGVDAAS-GRIVEVWNKIDRFEPEQRD 355
>gi|90424082|ref|YP_532452.1| HSR1-like GTP-binding protein [Rhodopseudomonas palustris BisB18]
gi|90106096|gb|ABD88133.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris
BisB18]
Length = 461
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 144/317 (45%), Positives = 193/317 (60%), Gaps = 31/317 (9%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
G+ R T+ G G VE I GA E D + ++ LS IQQRNLE+AW VLDR G
Sbjct: 77 GQIRPATYLGKGKVE----EILGAIKAHEADLVVMDCALSPIQQRNLEKAWSAKVLDRTG 132
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI+EIF A TKE LQ ELA L Y++SRLVR T E R G
Sbjct: 133 LILEIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRG 175
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G GF+ G GET+++ RR I +R S + ++I++V+ TR + RA R+R VA
Sbjct: 176 GFGFMGGPGETQIEADRRLIGDRISKIENEIKKVQGTRRLHRAGRQRV------PYRVVA 229
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPL 360
+VGYTNAGKSTL + L+ +++ + LFATLDP L+++ LP GK +LSDTVGFIS+LP
Sbjct: 230 LVGYTNAGKSTLFNRLTRAEVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPT 289
Query: 361 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN--MIEVW 418
QLV AF ATLEEV+EADL++HV D + + + V VL+Q+G+ E +IEVW
Sbjct: 290 QLVAAFRATLEEVLEADLILHVRDIAHEDADAQQDDVAAVLRQLGIDPEAGGGGRIIEVW 349
Query: 419 NKID-YHDEEMGDVEYI 434
NKID + +E+ ++ I
Sbjct: 350 NKIDRFAADELANLRNI 366
>gi|384921713|ref|ZP_10021680.1| GTP-binding protein, HSR1-like [Citreicella sp. 357]
gi|384464380|gb|EIE48958.1| GTP-binding protein, HSR1-like [Citreicella sp. 357]
Length = 417
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 186/304 (61%), Gaps = 30/304 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G +E ++ I E ++ + V+ +S +QQRNLE+AW +LDR GLI+EIF
Sbjct: 54 TLFGSGKIEELRARIEAEE----IELVLVDGPVSPVQQRNLEKAWKVKLLDRTGLILEIF 109
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T+E LQ E+AAL Y+++RLVR T E R GG GF+
Sbjct: 110 SDRAATREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQRGGLGFVG 152
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I E+ L Q++ V +TR + R AR + VA+VGYTN
Sbjct: 153 GPGETQIEADRRAIDEQLVRLRRQLDRVVKTRELHRKARAKVP------YPIVALVGYTN 206
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAF 366
AGKSTL + L+ +D+ + LFATLDP +++V LP+G V+LSDTVGFISDLP +LV AF
Sbjct: 207 AGKSTLFNRLTGADVMAKDMLFATLDPTMRAVRLPTGIDVILSDTVGFISDLPTELVAAF 266
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEEV+ AD+++HV D + PN E V Q+L +GV+E+ ++EVWNK D D
Sbjct: 267 RATLEEVIAADIILHVRDISHPNTAEQARDVDQILTSLGVNED--VPLLEVWNKTDRLDP 324
Query: 427 EMGD 430
E D
Sbjct: 325 ESHD 328
>gi|39935664|ref|NP_947940.1| GTP-binding protein HSR1-related [Rhodopseudomonas palustris
CGA009]
gi|39649517|emb|CAE28039.1| GTP binding protein-like [Rhodopseudomonas palustris CGA009]
Length = 424
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 202/353 (57%), Gaps = 47/353 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA LA ++ D D + L P + R T+ G G VE
Sbjct: 18 ARLDEAAGLARAI--------DLDVVEAVLTP----------ISQIRPATYLGKGKVE-- 57
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
I G + D I ++ LS IQQRNLE+AW VLDR GLI+EIF A T+E L
Sbjct: 58 --EIVGLIAAHGADLIVMDCALSPIQQRNLEKAWNAKVLDRTGLILEIFGRRAKTREGTL 115
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y++SRLVR T E R GG GF+ G GET+++ R
Sbjct: 116 QVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEADR 158
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I ER + L +++++V+ TR + RA R+R VA+VGYTNAGKSTL + L+
Sbjct: 159 RLIGERITKLEAELKKVQATRRLHRAGRQRV------PYRVVALVGYTNAGKSTLFNRLT 212
Query: 319 DSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 377
+D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP QLV AF ATLEEV+EAD
Sbjct: 213 RADVQAADMLFATLDPTLRAIQLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEAD 272
Query: 378 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGD 430
L++HV D + + E + V VL+Q+GV ++EVWNKID + E D
Sbjct: 273 LILHVRDISHEDAEAQQHDVDNVLRQLGVDAAS-GRIVEVWNKIDRFEPEQRD 324
>gi|395789393|ref|ZP_10468913.1| GTP-binding protein HflX [Bartonella taylorii 8TBB]
gi|395429936|gb|EJF95988.1| GTP-binding protein HflX [Bartonella taylorii 8TBB]
Length = 447
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 182/320 (56%), Gaps = 28/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T G G V+ + +I S+ ++ V+ L+ +QQRNLE+ W
Sbjct: 60 VVHYEAVNIAAPRPATLLGKGKVDALAHYI----SEYYIELAVVDYFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRAQTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRILQEKIIRIRRELETVIKTRALHRAKRKKASHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTN GKSTL + LS +D+ + LFATLDP L+ V+LP GK +LL DT
Sbjct: 219 ------VVALVGYTNTGKSTLFNQLSGADVLAKDMLFATLDPTLRKVILPHGKTILLFDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEVVEADL++HV D + H VL+VL +G++ +
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVVEADLILHVRDMADVDHYAHAKDVLEVLSSLGINVDDT 332
Query: 412 KNMIEVWNKIDYHDEEMGDV 431
+++IEVWNKID DE +V
Sbjct: 333 EHIIEVWNKIDLLDEHALNV 352
>gi|316934207|ref|YP_004109189.1| GTP-binding proten HflX [Rhodopseudomonas palustris DX-1]
gi|315601921|gb|ADU44456.1| GTP-binding proten HflX [Rhodopseudomonas palustris DX-1]
Length = 456
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 203/353 (57%), Gaps = 47/353 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L+EA LA ++ D D + L P + R T+ G G VE I
Sbjct: 50 ARLDEAAGLARAI--------DLDVVEAVLTP----------ISQIRPATYLGKGKVEDI 91
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
I + D + ++ LS IQQRNLE+AW VLDR GLI+EIF A T+E L
Sbjct: 92 VGLIAAHGA----DLVVMDCALSPIQQRNLEKAWNAKVLDRTGLILEIFGRRAKTREGTL 147
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y++SRLVR T E R GG GF+ G GET+++ R
Sbjct: 148 QVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEADR 190
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I ER + L +++++V+ TR + RA R+R VA+VGYTNAGKSTL + L+
Sbjct: 191 RLIGERITKLEAELKKVQATRRLHRAGRQRVP------YRVVALVGYTNAGKSTLFNRLT 244
Query: 319 DSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 377
+D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP QLV AF ATLEEV+EAD
Sbjct: 245 RADVQAADMLFATLDPTLRAIQLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEAD 304
Query: 378 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGD 430
L++HV D + + E ++ V VL+Q+GV ++EVWNKID + E D
Sbjct: 305 LILHVRDISHEDAEAQQSDVDNVLRQLGVDAAS-GRILEVWNKIDRFEPEQRD 356
>gi|407785662|ref|ZP_11132809.1| small GTP-binding protein [Celeribacter baekdonensis B30]
gi|407202612|gb|EKE72602.1| small GTP-binding protein [Celeribacter baekdonensis B30]
Length = 432
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 205/355 (57%), Gaps = 52/355 (14%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A L EA+ LA++L E E+ +V+ P ++ G+ FG G + +
Sbjct: 32 AGLEEAVALADALPEL------------EVVGSEIVRLPKMQPGQ-----LFGSGKIAEL 74
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
K +N AE +D + ++ +S +QQRNLE+ W +LDR GLI+EIF+ A T+E L
Sbjct: 75 KERLNAAE----VDLVLIDGRVSPVQQRNLEKEWKVKLLDRTGLILEIFSDRARTREGVL 130
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q E+AAL Y+++RLVR T E R GG GF+ G GET+++ R
Sbjct: 131 QVEMAALTYQRTRLVRA------WTHLE-----------RQRGGLGFVGGPGETQIEADR 173
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I + L Q+E+V +TR + RAAR + VA+VGYTNAGKST + ++
Sbjct: 174 RAIDDHLLRLKRQLEKVVKTRELHRAARAKV------PFPIVALVGYTNAGKSTFFNKVT 227
Query: 319 DSDLFSDARLFATLDPRLKSVVL--PSG----KVLLSDTVGFISDLPLQLVDAFHATLEE 372
+D+F LFATLDP ++SVVL P G +++LSDTVGFIS LP QLV AF ATLEE
Sbjct: 228 GADVFVKDMLFATLDPTMRSVVLEAPQGGTDREIILSDTVGFISSLPTQLVAAFRATLEE 287
Query: 373 VVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
V++ADL++HV D + +E V ++L +G+ E+ M EVWNKID D+E
Sbjct: 288 VLDADLILHVRDISHEKSDEQAADVRKILSDLGIKED--APMFEVWNKIDLLDDE 340
>gi|414173418|ref|ZP_11428181.1| GTP-binding protein HflX [Afipia broomeae ATCC 49717]
gi|410892070|gb|EKS39866.1| GTP-binding protein HflX [Afipia broomeae ATCC 49717]
Length = 458
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 187/304 (61%), Gaps = 28/304 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE + G ++D + ++ LS +QQRNLE+ W VLDR GLI+
Sbjct: 79 RPATYLGKGKVE----EMIGLIKANQVDLVVMDCALSPVQQRNLEKEWNAKVLDRTGLIL 134
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 135 EIFGRRAKTREGTLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 177
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R S + S++++V+ TR + RA R+R VA+VG
Sbjct: 178 FMGGPGETQIEADRRLIGDRISKIESELKKVQATRRLHRAGRQRVP------YRVVALVG 231
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFISDLP LV
Sbjct: 232 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISDLPTMLV 291
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EAD+++HV D + + + + V VL+Q+G+ + + ++EVWNKID
Sbjct: 292 AAFRATLEEVIEADVILHVRDISHEDADAQQHDVEGVLRQLGIDPDSGQRILEVWNKIDR 351
Query: 424 HDEE 427
DEE
Sbjct: 352 FDEE 355
>gi|417103023|ref|ZP_11960943.1| GTP-binding protein [Rhizobium etli CNPAF512]
gi|327191435|gb|EGE58458.1| GTP-binding protein [Rhizobium etli CNPAF512]
Length = 441
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 165/434 (38%), Positives = 232/434 (53%), Gaps = 79/434 (18%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGQVVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRLLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD--- 430
EADL++HV D + P+ + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAGKRLIEVWNKIDRLEPEVHDAMV 340
Query: 431 -----------VEYIDG-------DDIS-NFSRAEDKDTTSEPVDVECIDNYGGDDA--- 468
V + G D+IS S + T PVD + + D A
Sbjct: 341 QKAAGASNVVAVSAVSGEGVDTLMDEISRRLSGVMTETTIRLPVDKLALLPWLYDHAIVD 400
Query: 469 ---DNNDGFVSEDL 479
DN DG ++ DL
Sbjct: 401 GREDNEDGSITLDL 414
>gi|163868472|ref|YP_001609681.1| GTP-binding protein HflX [Bartonella tribocorum CIP 105476]
gi|161018128|emb|CAK01686.1| GTP-binding protein HflX [Bartonella tribocorum CIP 105476]
Length = 445
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 182/320 (56%), Gaps = 28/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T FG G + + +I+ K ++ ++ L+ +QQRNLE+ W
Sbjct: 60 VVNYETINLTTPRPATLFGKGKADVLADYID----KYSIELAIIDHFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+K RLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKGRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQEKIIRIRRELETVVKTRALHRAKRKK---- 214
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKSTL + LS +D+ + LFATLDP L+ VVLP GK +LLSDT
Sbjct: 215 --TSYPVVALVGYTNAGKSTLFNRLSGADVLAKNMLFATLDPTLRKVVLPHGKTILLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEVVEADL++HV D + H VL+VL + + +
Sbjct: 273 VGFISNLPTNLIAAFRATLEEVVEADLILHVRDMLDLDHRTHAQDVLEVLSSLDIDIDDT 332
Query: 412 KNMIEVWNKIDYHDEEMGDV 431
+++IEVWNKID DE+ +V
Sbjct: 333 EHIIEVWNKIDMVDEQALNV 352
>gi|414166887|ref|ZP_11423117.1| GTP-binding protein HflX [Afipia clevelandensis ATCC 49720]
gi|410892165|gb|EKS39960.1| GTP-binding protein HflX [Afipia clevelandensis ATCC 49720]
Length = 417
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 187/304 (61%), Gaps = 28/304 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE + I ++D + ++ LS +QQRNLE+ W VLDR GLI+
Sbjct: 38 RPATYLGKGKVEEMLGLIKA----NDVDLVVMDCALSPVQQRNLEKEWKAKVLDRTGLIL 93
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 94 EIFGRRAKTREGTLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 136
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER S + S++++V+ TR + RA R+R VA+VG
Sbjct: 137 FMGGPGETQIEADRRMISERISKIESELKKVQATRRLHRAGRQRVP------YRVVALVG 190
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFISDLP LV
Sbjct: 191 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISDLPTMLV 250
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EAD+++HV D + + E + V VL+Q+G+ + + ++EVWNKID
Sbjct: 251 AAFRATLEEVIEADVILHVRDISHEDAEAQQHDVEGVLRQLGIDLDGGQRILEVWNKIDR 310
Query: 424 HDEE 427
DE+
Sbjct: 311 FDED 314
>gi|254421034|ref|ZP_05034758.1| GTP-binding proten HflX [Brevundimonas sp. BAL3]
gi|196187211|gb|EDX82187.1| GTP-binding proten HflX [Brevundimonas sp. BAL3]
Length = 437
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 187/301 (62%), Gaps = 28/301 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G VE + + A++ +A+ ++ L+ +QQRNLE+AW V+DR GLI+EIF
Sbjct: 63 TLFGSGKVEELAALVRAADA----EAVIIDDALTPVQQRNLEKAWEVKVIDRTGLILEIF 118
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKE +LQ ELA L Y++SRLVR T E R GG G
Sbjct: 119 GRRARTKEGRLQVELARLDYERSRLVRT------WTHLE-----------RQRGGTGSTG 161
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++L RR I +R L +++EEVRRTR + R R++ T+A+VGYTN
Sbjct: 162 GPGETQIELDRRLIADRIVRLKAELEEVRRTRGLHRKQRQKVP------FPTIALVGYTN 215
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
AGKSTL + L+ S++F+ LFATLD +++ LP G+ +++DTVGFISDLP +LV++F
Sbjct: 216 AGKSTLFNRLTGSEVFAKDLLFATLDTTQRTIRLPQGRPAIVADTVGFISDLPHELVESF 275
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEEV EADL++HV D + + + V VL+Q+ E K + ++EVWNKID D+
Sbjct: 276 RATLEEVGEADLILHVRDIASADSDAQAKDVETVLKQIETPEGKTRRVLEVWNKIDLLDD 335
Query: 427 E 427
E
Sbjct: 336 E 336
>gi|424914082|ref|ZP_18337446.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392850258|gb|EJB02779.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 441
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 51/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVTGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 430
EADL++HV D + P+ + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAAKRLIEVWNKIDRLEPEVHD 337
>gi|451940610|ref|YP_007461248.1| GTP-binding protein HflX [Bartonella australis Aust/NH1]
gi|451899997|gb|AGF74460.1| GTP-binding protein HflX [Bartonella australis Aust/NH1]
Length = 447
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 183/320 (57%), Gaps = 28/320 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + R TFFG G V+T +I SK + V+ L+ +QQ NLE++W
Sbjct: 60 VVHHEIINITTPRPLTFFGAGKVDTFADYI----SKHRIALAIVDHCLTPVQQHNLEKSW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTVLILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + ++ + + +++ + +TR++ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRLLQDKITRIRRELDTIVKTRSLHRAKRKKTPHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKSTL + LS +++ + LFATLDP L+ ++LP G+ +LLSDT
Sbjct: 219 ------VVALVGYTNAGKSTLFNYLSGANVLTKNMLFATLDPTLRKIILPHGQTILLSDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFISDLP L+ AF ATLEEVVEADL++HV D + P+ H VL++L +GV
Sbjct: 273 VGFISDLPTHLIAAFRATLEEVVEADLILHVRDMSDPDHRAHSQDVLEILSSLGVDIGDT 332
Query: 412 KNMIEVWNKIDYHDEEMGDV 431
++EVWNKID D+ V
Sbjct: 333 DRILEVWNKIDILDKHTLSV 352
>gi|329850675|ref|ZP_08265520.1| GTP-binding protein HflX [Asticcacaulis biprosthecum C19]
gi|328840990|gb|EGF90561.1| GTP-binding protein HflX [Asticcacaulis biprosthecum C19]
Length = 441
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 156/396 (39%), Positives = 214/396 (54%), Gaps = 55/396 (13%)
Query: 41 NKDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFD 100
+K D+ D+V DPD + R P ++L+EA+ LA +L+ + G
Sbjct: 3 DKYIDNAPDIVRAVVIDPDIA---HAAEQRAAPRLLEDSRLDEAIGLALALDLEIAGSL- 58
Query: 101 TDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNA 158
S++ K T FG G VE IK E+DA VN
Sbjct: 59 -----------------SVRVRKLNPATLFGAGKVEEIKALCE------EVDASLCVVNG 95
Query: 159 ILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGP 218
L+ IQQRNLE+ + V+DR G+I+EIF A T+E KLQ ELA L Y+KSRLVR
Sbjct: 96 SLTPIQQRNLEKELERKVIDRTGMILEIFGRRARTREGKLQVELARLEYEKSRLVRT--- 152
Query: 219 DGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRT 278
T E A + G GET+++L RR I ++ L ++++EVRRT
Sbjct: 153 ---WTHLERQRATGTT------------GGPGETQIELDRRMIADKIKQLKTELDEVRRT 197
Query: 279 RAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKS 338
RA+ R R++ VA+VGYTNAGKSTL + L+ +++ + LFATLD L++
Sbjct: 198 RALHRVQRKKVP------YPIVALVGYTNAGKSTLFNHLTRAEVVAKDLLFATLDTTLRT 251
Query: 339 VVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTV 397
+ LP+G+ +LSDTVGFISDLP +LV AF ATLEEV +ADL++HV D + P E R V
Sbjct: 252 LKLPNGRSAMLSDTVGFISDLPHELVAAFRATLEEVEQADLILHVRDVSNPETEAQRQDV 311
Query: 398 LQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEY 433
QVLQ + + + M EVWNKID D + +V Y
Sbjct: 312 EQVLQHI-LPDLDRGRMFEVWNKIDLLDPDSKEVLY 346
>gi|99081196|ref|YP_613350.1| HSR1-like GTP-binding protein [Ruegeria sp. TM1040]
gi|99037476|gb|ABF64088.1| GTP-binding protein HSR1-related [Ruegeria sp. TM1040]
Length = 423
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/324 (42%), Positives = 193/324 (59%), Gaps = 30/324 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV + + KA FG G +E +K E ++ + ++ +S +QQRN
Sbjct: 40 LPDLEVVGSTVVGLPKAHPGMLFGSGKIEELKTLFKAEE----VELVLIDGPVSPVQQRN 95
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 96 LEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE- 148
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAAR
Sbjct: 149 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLDKVVKTRTLHRAARA 198
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KV 346
+ VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP G +V
Sbjct: 199 KV------PYPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVELPDGPEV 252
Query: 347 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 406
+LSDTVGFISDLP +LV +F ATLEEV+ AD+++HV D + + E V Q+L +GV
Sbjct: 253 ILSDTVGFISDLPTELVASFRATLEEVLAADVILHVRDISHSDTEHQAEDVEQILSSLGV 312
Query: 407 SEEKLKNMIEVWNKIDYHDEEMGD 430
E+ + +IEVWNKID EE D
Sbjct: 313 DED--RTVIEVWNKIDQLSEEEAD 334
>gi|154253563|ref|YP_001414387.1| GTP-binding protein HSR1-like [Parvibaculum lavamentivorans DS-1]
gi|154157513|gb|ABS64730.1| GTP-binding protein HSR1-related [Parvibaculum lavamentivorans
DS-1]
Length = 474
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 160/393 (40%), Positives = 215/393 (54%), Gaps = 62/393 (15%)
Query: 54 FNRDPDDPPRLFLVQPRLKPPTFLQAK-----------LNEALCLANSLEEQRDGYFDTD 102
F P + R F+V P LK QAK L+EA+ LA ++
Sbjct: 18 FRVKPAELTRAFVVVPWLKS-VAKQAKRGGGGRSPESRLDEAVGLAAAISLN-------- 68
Query: 103 FFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSG 162
VV + + R T FG G V+ IK I AE + +D + V+ L
Sbjct: 69 ----------VVGSVVVPLASPRPATLFGEGKVDEIKGQI--AELR--VDLVIVDGALGP 114
Query: 163 IQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRL 222
QQRNLE+AW VLDR GLI+EIF A T+E LQ ELA L Y+KSRLVR
Sbjct: 115 GQQRNLEKAWNVKVLDRTGLILEIFGERARTREGSLQVELAHLNYQKSRLVR------SW 168
Query: 223 TFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQ 282
T E R GG GF+ G GET+++ RR I ER + + Q+E V+RTR +
Sbjct: 169 THLE-----------RQRGGFGFLGGPGETQIEADRRLIQERIAKIEHQLETVKRTRELH 217
Query: 283 RAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP 342
R RR VA+VGYTNAGKSTL + L+++ +F++ LFATLDP ++++VLP
Sbjct: 218 RKKRREA------PYPIVALVGYTNAGKSTLFNRLTEAGVFAENLLFATLDPTMRALVLP 271
Query: 343 SG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVL 401
SG K++LSDTVGFISDLP LV AF ATLEEV+EA++++HV D +T V +VL
Sbjct: 272 SGRKIILSDTVGFISDLPTHLVAAFRATLEEVLEAEVILHVRDAAHEETAIQKTDVEKVL 331
Query: 402 QQVGVSEEKL----KNMIEVWNKIDYHDEEMGD 430
+GV+ E +++++V NKID + E D
Sbjct: 332 TSLGVTRESTAANGQHVVDVLNKIDLLEGEFRD 364
>gi|319407328|emb|CBI80971.1| GTP-binding protein hflX [Bartonella sp. 1-1C]
Length = 448
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 184/316 (58%), Gaps = 28/316 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + TFF G +IN + + V+ L+ +QQRNLE+ W
Sbjct: 61 VVHYEIINIAKPCSSTFFRIGKANEFAHYIN----EHHIMLSIVDHFLTPVQQRNLEKLW 116
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 117 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE------ 164
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + + + ++E V +TRA+ RA R+R
Sbjct: 165 -----RQRGGTGFLGGPGETQIEADRRLLQNKIISIRRELETVVKTRALHRAKRKRIPH- 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
+A+VGYTNAGKSTL + LSDS++ ++ LFATLDP L+ +VLP G+ VLLSDT
Sbjct: 219 -----PVIALVGYTNAGKSTLFNRLSDSNVLAEDMLFATLDPTLRKIVLPHGQTVLLSDT 273
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEV+EADL++HV D + P+ H V ++L +GV
Sbjct: 274 VGFISNLPTHLIAAFRATLEEVIEADLILHVRDVSDPDHYAHAQDVFEILSDLGVDINDT 333
Query: 412 KNMIEVWNKIDYHDEE 427
+++E+WNKID D+
Sbjct: 334 DHIVEIWNKIDTLDQH 349
>gi|259416757|ref|ZP_05740677.1| GTP-binding protein HflX [Silicibacter sp. TrichCH4B]
gi|259348196|gb|EEW59973.1| GTP-binding protein HflX [Silicibacter sp. TrichCH4B]
Length = 423
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/324 (42%), Positives = 192/324 (59%), Gaps = 30/324 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV + KA FG G +E +K E ++ + ++ +S +QQRN
Sbjct: 40 LPDLEVVGAKVVGLPKAHPGMLFGSGKIEELKTLFKAEE----VELVLIDGPVSPVQQRN 95
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 96 LEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE- 148
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAAR
Sbjct: 149 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLDKVVKTRTLHRAARA 198
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KV 346
+ VA+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ V LP G +V
Sbjct: 199 KI------PYPIVALVGYTNAGKSTLFNRLTGADVMAKDMLFATLDPTMRRVELPDGPEV 252
Query: 347 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 406
+LSDTVGFISDLP +LV +F ATLEEV+ AD+++HV D + + E V Q+L +GV
Sbjct: 253 ILSDTVGFISDLPTELVASFRATLEEVLAADVILHVRDISHSDTENQAEDVEQILNSLGV 312
Query: 407 SEEKLKNMIEVWNKIDYHDEEMGD 430
E+ + +IEVWNKID EE D
Sbjct: 313 DED--RALIEVWNKIDQLSEEDAD 334
>gi|86357576|ref|YP_469468.1| GTP-binding protein [Rhizobium etli CFN 42]
gi|86281678|gb|ABC90741.1| GTP-binding protein [Rhizobium etli CFN 42]
Length = 441
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 206/357 (57%), Gaps = 51/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRLLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 430
EADL++HV D + P+ + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAEKRLIEVWNKIDRLEPEVHD 337
>gi|335037229|ref|ZP_08530540.1| GTP-binding protein [Agrobacterium sp. ATCC 31749]
gi|333791385|gb|EGL62771.1| GTP-binding protein [Agrobacterium sp. ATCC 31749]
Length = 482
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 167/435 (38%), Positives = 225/435 (51%), Gaps = 74/435 (17%)
Query: 13 LRSITQTLTF------PISLHSYSYSSSKRQTKDNKDKDDLHDVVTL-------FNRDPD 59
+RS TF PIS + SS + K +DD+ VV + NRD
Sbjct: 1 MRSAVTFFTFFLDKAEPIS--TRDTSSESIIPEQEKRRDDMRAVVLVPVLKQQRENRDAA 58
Query: 60 DPPRLFLVQPRLKPPTFLQAKLNEA--LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P P ++AKL EA L LA LE V Q
Sbjct: 59 SAP--------AAPGRSVEAKLEEAKGLALAIDLE--------------------VTQGL 90
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
+ + R T FG G +E I ++ +S + V+ L+ +QQRNLE+ W V+
Sbjct: 91 VVPVNQPRPATLFGTGKIEEIGHLLDETDS----GLVIVDHPLTPVQQRNLEKQWNAKVI 146
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 147 DRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE----------- 189
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR + +R L ++E+V RTR + RA RR+
Sbjct: 190 RQRGGAGFMGGPGETQIEADRRLLQDRIVKLEKELEQVVRTRQLHRAKRRKVPHP----- 244
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS
Sbjct: 245 -IVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFIS 303
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMI 415
DLP LV AF ATLEEV+EADL++HV D + P+ VL++L +G+ E E K +I
Sbjct: 304 DLPTHLVAAFRATLEEVLEADLVLHVRDMSDPDNAAQSADVLRILGDLGIDEKEAEKRII 363
Query: 416 EVWNKIDYHDEEMGD 430
EVWNK+D + E D
Sbjct: 364 EVWNKVDRLEPEAHD 378
>gi|307942253|ref|ZP_07657604.1| GTP-binding protein HflX [Roseibium sp. TrichSKD4]
gi|307774539|gb|EFO33749.1| GTP-binding protein HflX [Roseibium sp. TrichSKD4]
Length = 463
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/308 (44%), Positives = 184/308 (59%), Gaps = 28/308 (9%)
Query: 119 LKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLD 178
+K + T FG G V + G + E D + ++ L+ IQQRNLE+ V+D
Sbjct: 83 VKVNNPKPATLFGEGKV----SELTGIVAAQEADLVVIDHPLTPIQQRNLEKHLKTKVID 138
Query: 179 RVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR 238
R GLI+EIF A TKE KLQ +LA L ++KSRLVR T E R
Sbjct: 139 RTGLILEIFGDRARTKEGKLQVDLAHLTWQKSRLVR------SWTHLE-----------R 181
Query: 239 GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
GG GF+ G GET+++ RR+I +R + L Q+E+VRRTR + R R++
Sbjct: 182 QRGGTGFMGGPGETQIESDRRQIQDRITALQKQLEQVRRTRDLHRKKRKKIPQP------ 235
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISD 357
VA+VGYTNAGKSTL + +++S++F+ LFATLDP L+ + LP G+ ++LSDTVGFISD
Sbjct: 236 VVALVGYTNAGKSTLFNRMTESNVFAKDLLFATLDPTLRKIRLPHGREIILSDTVGFISD 295
Query: 358 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 417
LP LV AF ATLEEV+EADL++HV D + P+ E V + L +GV +IEV
Sbjct: 296 LPTHLVAAFRATLEEVLEADLILHVRDISHPDSEAQCEDVKKTLVDLGVDGSHAAPVIEV 355
Query: 418 WNKIDYHD 425
WNKID D
Sbjct: 356 WNKIDALD 363
>gi|421602666|ref|ZP_16045219.1| GTP-binding protein HFLX [Bradyrhizobium sp. CCGE-LA001]
gi|404265222|gb|EJZ30349.1| GTP-binding protein HFLX [Bradyrhizobium sp. CCGE-LA001]
Length = 415
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/304 (45%), Positives = 188/304 (61%), Gaps = 28/304 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I I E ++ + ++ L+ IQQRNLE+ VLDR GLI+
Sbjct: 34 RPATYIGKGKVEEIAGLIKSLE----VELVVMDCALAPIQQRNLEKELHAKVLDRTGLIL 89
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 90 EIFGRRAKTREGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 132
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER S L S++++V+ TR + RA R+R VA+VG
Sbjct: 133 FMGGPGETQIEADRRLIQERISKLESELKKVQATRRLHRAGRQRVP------YRVVALVG 186
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP QLV
Sbjct: 187 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLV 246
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EAD+++HV D + + E ++ V VL+Q+G++ + +IEVWNKID
Sbjct: 247 AAFRATLEEVLEADVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDR 306
Query: 424 HDEE 427
+D E
Sbjct: 307 YDAE 310
>gi|218674750|ref|ZP_03524419.1| GTP-binding protein [Rhizobium etli GR56]
Length = 397
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/367 (40%), Positives = 208/367 (56%), Gaps = 47/367 (12%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGQVVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR + +R L ++E+V RTR + RA RR+ VA+VGYTNAGKSTL + +
Sbjct: 169 RRLLQDRIIKLERELEQVVRTRQLHRAKRRKVPHP------IVALVGYTNAGKSTLFNRI 222
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+EA
Sbjct: 223 TGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEA 282
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGDVEYID 435
DL++HV D + P+ + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 283 DLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAEKRLIEVWNKIDRLEPEVHDAMVQK 342
Query: 436 GDDISNF 442
SN
Sbjct: 343 AAGASNV 349
>gi|433775414|ref|YP_007305881.1| GTP-binding protein HflX [Mesorhizobium australicum WSM2073]
gi|433667429|gb|AGB46505.1| GTP-binding protein HflX [Mesorhizobium australicum WSM2073]
Length = 463
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 206/381 (54%), Gaps = 56/381 (14%)
Query: 50 VVTLFNRDP---DDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDK 106
+V + R P DD R PRL +A+ +EA+ LA ++ D D
Sbjct: 32 IVPVLTRQPRNDDDTNR-----PRLTRSA--EARHDEAVGLARAI--------DLDLIHT 76
Query: 107 ELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
+ V V +P R T G G VE G +G + + V+ L+ +QQR
Sbjct: 77 AV---VTVNDP-------RPATLLGSGKVE----EFAGIVREGHAEVVIVDHPLTPVQQR 122
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLE+ + VLDR GLI+EIF A TKE LQ ELA L Y+K RLVR T E
Sbjct: 123 NLEKQFNAKVLDRTGLILEIFGERARTKEGTLQVELAHLNYQKGRLVR------SWTHLE 176
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
R GG GF+ G GET+++ RR++ E+ L ++E VRRTR + RA R
Sbjct: 177 -----------RQRGGAGFLGGPGETQIESDRRQLQEKIIKLKHELETVRRTRDLHRAKR 225
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK- 345
++ VA+VGYTNAGKSTL + L+ + + + LFATLDP L+ V LP G
Sbjct: 226 KK------VPFPVVAIVGYTNAGKSTLFNKLTGAGVLAQDMLFATLDPTLRRVRLPHGTP 279
Query: 346 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 405
++LSDTVGFISDLP L+ AF ATLEEVVEADL++H+ D + P+ V ++L +G
Sbjct: 280 IILSDTVGFISDLPTHLIAAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVERILADLG 339
Query: 406 VSEEKLKNMIEVWNKIDYHDE 426
V + +IEVWNKID DE
Sbjct: 340 VDASDTRRVIEVWNKIDLLDE 360
>gi|110633964|ref|YP_674172.1| HSR1-like GTP-binding protein [Chelativorans sp. BNC1]
gi|110284948|gb|ABG63007.1| GTP-binding protein, HSR1-related protein [Chelativorans sp. BNC1]
Length = 460
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 211/395 (53%), Gaps = 58/395 (14%)
Query: 74 PTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPG 133
P QAKL+EA+ LA +++ + ++FF P R T G G
Sbjct: 51 PLSPQAKLDEAVGLAEAIDLE---ITHSEFFTVAQP---------------RPATLIGAG 92
Query: 134 TVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHT 193
V+ + + AE+ EL + ++ L+ +QQRNLER VLDR GLI+EIF A T
Sbjct: 93 KVKDLANIV--AETGAEL--VIIDHQLTPVQQRNLERELKAKVLDRTGLILEIFGRRART 148
Query: 194 KEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETE 253
KE +LQ +LA L Y++ RLVR T E R GG GF+ G GET+
Sbjct: 149 KEGRLQVDLAHLEYQRGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQ 191
Query: 254 LQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTL 313
++ RR + ER + ++E VRRTR + R RR+ VA+VGYTNAGKSTL
Sbjct: 192 IEADRRLLQERIIRIKRELETVRRTRDLHRTKRRKVP------FPIVAIVGYTNAGKSTL 245
Query: 314 VSALSDSDLFSDARLFATLDPRLKSVVLPSGKV-LLSDTVGFISDLPLQLVDAFHATLEE 372
+ L+ + + ++ LFATLDP L+ V P G V +LSDTVGFISDLP LV AF ATLEE
Sbjct: 246 FNRLTGASVLAEDMLFATLDPTLRRVRFPHGTVVILSDTVGFISDLPPHLVAAFRATLEE 305
Query: 373 VVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVE 432
VVEAD+++H+ D + P+ H V QVL +GV +EVWNKID E D E
Sbjct: 306 VVEADVILHLRDISDPDTAAHARDVEQVLASLGVDTSDPARAVEVWNKIDRLSE--ADRE 363
Query: 433 YIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDD 467
+ DDI+ + P+ + I G +D
Sbjct: 364 RLLRDDINK----------TAPIAISAITGEGIED 388
>gi|395766305|ref|ZP_10446875.1| GTP-binding protein HflX [Bartonella sp. DB5-6]
gi|395408956|gb|EJF75559.1| GTP-binding protein HflX [Bartonella sp. DB5-6]
Length = 447
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 206/395 (52%), Gaps = 46/395 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV ++ R T G G V+ + +I S+ ++ ++ L+ +QQRNLE+ W
Sbjct: 60 VVHYETVNIAALRPATLLGKGKVDALAHYI----SEYSIELAVIDYFLTPVQQRNLEKLW 115
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 116 NCKVIDRTALILEIFGDRAQTKEGVLQVELAHLSYQKSRLVR------SWTHLERQRGGR 169
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GET+++ RR + E+ + ++E V +TRA+ RA R++
Sbjct: 170 GFL-----------GGPGETQIEADRRILQEKIIRIRRELETVIKTRALHRAKRKKTSHP 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTN GKSTL + L+ +D+ + LFATLDP L+ VVLP GK +LL DT
Sbjct: 219 ------VVALVGYTNTGKSTLFNNLTRADVLAKDMLFATLDPTLRKVVLPHGKTILLFDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEVVEA L++HV D + H VL+VL +G++ +
Sbjct: 273 VGFISNLPTHLIAAFRATLEEVVEASLILHVRDMADVDHYTHAKDVLEVLLSLGINVDDT 332
Query: 412 KNMIEVWNKIDYHDEEMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVD 456
+++IEVWNKID DE + V + D + A +K + +
Sbjct: 333 EHIIEVWNKIDLLDEHALNVLQTSAKTQLNPAVMVSALMSDGLDQLLIAIEKRIFGKMQN 392
Query: 457 VECIDNYGGDDADNNDGFVSEDLGESMNKNHNDYS 491
VECI + D F E+ GE M + H+D S
Sbjct: 393 VECI--LRPHEMSLIDWF-YENSGEIMQEGHDDGS 424
>gi|424881471|ref|ZP_18305103.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WU95]
gi|392517834|gb|EIW42566.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WU95]
Length = 441
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 206/357 (57%), Gaps = 51/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGQIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKVWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 430
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEAEKRLIEVWNKIDRLEPEVHD 337
>gi|299133863|ref|ZP_07027057.1| GTP-binding proten HflX [Afipia sp. 1NLS2]
gi|298591699|gb|EFI51900.1| GTP-binding proten HflX [Afipia sp. 1NLS2]
Length = 464
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 201/351 (57%), Gaps = 46/351 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
QA+L+EA+ LA +++ VVV+ + R T+ G G VE
Sbjct: 54 QARLDEAVGLARAID------------------LVVVEALIAPLSEIRPATYLGTGKVEE 95
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I I E++ + ++ LS IQQRNLE+ W VLDR GLI+EIF A T+E
Sbjct: 96 ILGLIKA----HEVELVVMDCALSPIQQRNLEKEWNVKVLDRTGLILEIFGRRAKTREGT 151
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L+Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 152 LQVELAHLIYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEAD 194
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + + + +++V+ TR + RA R+R VA+VGYTNAGKSTL + L
Sbjct: 195 RRMIGERITRIENDLKKVQATRRLHRAGRQRVP------YRVVALVGYTNAGKSTLFNRL 248
Query: 318 SDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ +D+ + LFATLDP L+++ LP GK ++SDTVGFISDLP LV AF ATLEEV+EA
Sbjct: 249 TRADVQAADMLFATLDPTLRALKLPHGGKAMISDTVGFISDLPTMLVAAFRATLEEVIEA 308
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
D+++HV D + + E V QVL+Q+ + + +IEVWNKID E
Sbjct: 309 DVILHVRDISHEDAEAQERDVDQVLRQLNIDTDSGHRLIEVWNKIDRFSPE 359
>gi|407781505|ref|ZP_11128723.1| putative GTP-binding protein (HflX-like) [Oceanibaculum indicum
P24]
gi|407207722|gb|EKE77653.1| putative GTP-binding protein (HflX-like) [Oceanibaculum indicum
P24]
Length = 456
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/317 (43%), Positives = 191/317 (60%), Gaps = 29/317 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + ++ +A T G G VE I+ E ++ ++ LS +QQRNLER+
Sbjct: 68 IVHSEVVRVSRATPATLMGSGQVERFADVIDAME----IEVAVIDTALSPVQQRNLERSL 123
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A A T E +LQ ELAAL Y++SRLVR T E
Sbjct: 124 KCKVIDRTALILEIFGARARTHEGRLQVELAALTYQRSRLVR------SWTHLE------ 171
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GE++++L RR I ++ L Q++EV+RTR + R+ARR+
Sbjct: 172 -----RQRGGAGFMGGPGESQIELDRRIIDDKIVKLKRQLDEVKRTRELHRSARRKVP-- 224
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKSTL + ++ S +F+ LFATLDP ++ + LPSG+ ++LSDT
Sbjct: 225 ----YPIVALVGYTNAGKSTLFNRMTRSAVFAKDLLFATLDPTMRRLSLPSGRQIILSDT 280
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS-EEK 410
VGFISDLP QLV AF ATLEEV+EAD+++HV D P+ R V VL +G++ EE
Sbjct: 281 VGFISDLPTQLVAAFRATLEEVLEADIILHVRDVAHPDSAAQRADVEAVLADLGIAPEES 340
Query: 411 LKNMIEVWNKIDYHDEE 427
+IEV NK+D EE
Sbjct: 341 DTPIIEVLNKVDLLPEE 357
>gi|430003573|emb|CCF19362.1| putative GTP-binding protein (hflX) [Rhizobium sp.]
Length = 456
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/355 (40%), Positives = 202/355 (56%), Gaps = 47/355 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA +++ + VVQ ++ + R T G G +
Sbjct: 43 EARLEEAIGLARAIDLE------------------VVQGLIVQVSQPRPATLMGTGKIGE 84
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ ++ + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 85 IKALLDQHDA----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 140
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 141 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGAGFMGGPGETQIEAD 183
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR + ER L ++E+V RTR + RA RR+ VA+VGYTNAGKSTL + +
Sbjct: 184 RRLLQERIVKLERELEQVVRTRQLHRAKRRKVPHP------IVALVGYTNAGKSTLFNRI 237
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+EA
Sbjct: 238 TGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEA 297
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 430
DL++HV D + P+ V+++L +G+ E E+ +IEVWNKID D E D
Sbjct: 298 DLILHVRDMSDPDNAAQSADVMRILSDLGIDEKEREARIIEVWNKIDRLDPEAHD 352
>gi|337741152|ref|YP_004632880.1| GTP-binding protein HflX [Oligotropha carboxidovorans OM5]
gi|386030168|ref|YP_005950943.1| GTP-binding protein HflX [Oligotropha carboxidovorans OM4]
gi|336095236|gb|AEI03062.1| GTP-binding protein HflX [Oligotropha carboxidovorans OM4]
gi|336098816|gb|AEI06639.1| GTP-binding protein HflX [Oligotropha carboxidovorans OM5]
Length = 463
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 183/304 (60%), Gaps = 28/304 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I I ++D + ++ LS IQQRNLE+ W VLDR GLI+
Sbjct: 84 RPATYLGKGKVEDILGLIKA----HDVDLVVMDCALSPIQQRNLEKEWNAKVLDRTGLIL 139
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L+Y++SRLVR T E R GG G
Sbjct: 140 EIFGRRAKTREGTLQVELAHLIYQRSRLVR------SWTHLE-----------RQRGGFG 182
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER + + + +++V+ TR + RA R+R VA+VG
Sbjct: 183 FMGGPGETQIEADRRMIGERITRIENDLKKVQATRRLHRAGRKRVP------YRVVALVG 236
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK ++SDTVGFISDLP LV
Sbjct: 237 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALRLPHGGKAMISDTVGFISDLPTMLV 296
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EAD+++HV D + + E V VL+Q+G+ E +IEVWNKID
Sbjct: 297 AAFRATLEEVIEADVILHVRDISHEDAEAQERDVDHVLRQLGIGTESGHRIIEVWNKIDC 356
Query: 424 HDEE 427
E
Sbjct: 357 FSPE 360
>gi|383771935|ref|YP_005451000.1| GTP-binding protein HFLX [Bradyrhizobium sp. S23321]
gi|381360058|dbj|BAL76888.1| GTP-binding protein HFLX [Bradyrhizobium sp. S23321]
Length = 465
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/304 (45%), Positives = 187/304 (61%), Gaps = 28/304 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I + ++ + ++ L+ IQQRNLE+ VLDR GLI+
Sbjct: 85 RPATYIGKGKVEEIAALARSLD----VELVVMDCALAPIQQRNLEKELNTKVLDRTGLIL 140
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y++SRLVR T E R GG G
Sbjct: 141 EIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 183
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER S L S++++V+ TR + RA R+R VA+VG
Sbjct: 184 FMGGPGETQIEADRRLIQERISKLESELKKVQATRRLHRAGRQR------VPYRVVALVG 237
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP QLV
Sbjct: 238 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALSLPHGGKAMLSDTVGFISNLPTQLV 297
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EAD+++HV D + + E ++ V VL+Q+G++ + +IEVWNKID
Sbjct: 298 AAFRATLEEVLEADVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDR 357
Query: 424 HDEE 427
+D E
Sbjct: 358 YDAE 361
>gi|402487604|ref|ZP_10834422.1| GTP-binding proten HflX [Rhizobium sp. CCGE 510]
gi|401813473|gb|EJT05817.1| GTP-binding proten HflX [Rhizobium sp. CCGE 510]
Length = 441
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 165/434 (38%), Positives = 228/434 (52%), Gaps = 79/434 (18%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVTGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK +N +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLNERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD--- 430
EADL++HV D P+ + + V+++L +G+ E E K +IEVWNKID + + D
Sbjct: 281 EADLILHVRDMADPDNQVQSSDVMRILGDLGIDEAEAEKRLIEVWNKIDRLEPAVHDTMV 340
Query: 431 -----------VEYIDG-------DDIS-NFSRAEDKDTTSEPVDVECIDNYGGDDA--- 468
V + G D+IS S + T PVD + + D A
Sbjct: 341 QKSAGASNVVAVSAVSGEGVDTLMDEISRRLSGVMTEATVRLPVDKLALLPWLYDHAIVD 400
Query: 469 ---DNNDGFVSEDL 479
DN DG ++ DL
Sbjct: 401 AREDNEDGSITLDL 414
>gi|209885224|ref|YP_002289081.1| GTP-binding proten HflX [Oligotropha carboxidovorans OM5]
gi|209873420|gb|ACI93216.1| GTP-binding proten HflX [Oligotropha carboxidovorans OM5]
Length = 437
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 183/304 (60%), Gaps = 28/304 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I I ++D + ++ LS IQQRNLE+ W VLDR GLI+
Sbjct: 58 RPATYLGKGKVEDILGLIKA----HDVDLVVMDCALSPIQQRNLEKEWNAKVLDRTGLIL 113
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L+Y++SRLVR T E R GG G
Sbjct: 114 EIFGRRAKTREGTLQVELAHLIYQRSRLVR------SWTHLE-----------RQRGGFG 156
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER + + + +++V+ TR + RA R+R VA+VG
Sbjct: 157 FMGGPGETQIEADRRMIGERITRIENDLKKVQATRRLHRAGRKRVP------YRVVALVG 210
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK ++SDTVGFISDLP LV
Sbjct: 211 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALRLPHGGKAMISDTVGFISDLPTMLV 270
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EAD+++HV D + + E V VL+Q+G+ E +IEVWNKID
Sbjct: 271 AAFRATLEEVIEADVILHVRDISHEDAEAQERDVDHVLRQLGIGTESGHRIIEVWNKIDC 330
Query: 424 HDEE 427
E
Sbjct: 331 FSPE 334
>gi|254486973|ref|ZP_05100178.1| GTP-binding proten HflX [Roseobacter sp. GAI101]
gi|214043842|gb|EEB84480.1| GTP-binding proten HflX [Roseobacter sp. GAI101]
Length = 412
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/298 (44%), Positives = 183/298 (61%), Gaps = 30/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A FG G +E +K AE ++ + V+ ++ +QQRNLE+AWG +LDR GLI+E
Sbjct: 47 AGMLFGSGKIEELKQKFEAAE----VELVLVDGAVTPVQQRNLEKAWGVKLLDRTGLILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF+ A T+E LQ E+AAL Y+++RLVR T E R GG GF
Sbjct: 103 IFSDRAATREGVLQVEMAALNYQRTRLVRA------WTHLE-----------RQRGGLGF 145
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+++ RR I E+ L Q+++V +TRA+ RAAR + VA+VGY
Sbjct: 146 VGGPGETQIESDRRAIDEQLVRLRRQLDKVVKTRALHRAARAKV------PYPIVALVGY 199
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ +D+ + LFATLDP ++S+VLP G +++LSDTVGFISDLP +LV
Sbjct: 200 TNAGKSTLFNRLTGADVMAKDMLFATLDPTMRSLVLPDGPEIILSDTVGFISDLPTELVA 259
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATLEEV+ AD++ HV D + EE V +L +GV +E EVWNK+D
Sbjct: 260 AFRATLEEVLAADIICHVRDISHAETEEQAQNVRDILASLGVPKE--TRSFEVWNKLD 315
>gi|209963483|ref|YP_002296398.1| GTP-binding protein hflX [Rhodospirillum centenum SW]
gi|209956949|gb|ACI97585.1| GTP-binding protein hflX, putative [Rhodospirillum centenum SW]
Length = 430
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 178/274 (64%), Gaps = 24/274 (8%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+ V+ L+ +QQRNLE+AW V+DR GLI+EIF A A T+E +LQ ELAAL Y++SRLV
Sbjct: 61 VVVDHALTPVQQRNLEKAWKAKVIDRTGLILEIFGARARTREGQLQVELAALTYQRSRLV 120
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
R T E R GG GF+ G GE++L++ RR I ER + L +++E
Sbjct: 121 R------SWTHLE-----------RQRGGFGFLGGPGESQLEIDRRLIGERIARLKAELE 163
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLD 333
EVRRTR + R AR + VA+VGYTNAGKSTL + ++ +D+F+ LFATLD
Sbjct: 164 EVRRTRGLHRRAREKVP------YPVVALVGYTNAGKSTLFNRMAGADVFAKDLLFATLD 217
Query: 334 PRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEE 392
P ++++ LPS K++LSDTVGFISDLP LV+AF ATLEEV AD+++HV D + P+ E
Sbjct: 218 PTMRAITLPSNRKIILSDTVGFISDLPHGLVEAFRATLEEVQAADIVLHVRDVSHPDTEA 277
Query: 393 HRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
+ V VL+++G+ + ++EV NKID E
Sbjct: 278 QKADVETVLRELGIEVDSDARVVEVLNKIDLVPE 311
>gi|325292781|ref|YP_004278645.1| GTP-binding protein HflX [Agrobacterium sp. H13-3]
gi|325060634|gb|ADY64325.1| GTP-binding protein HFLX [Agrobacterium sp. H13-3]
Length = 479
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 213/393 (54%), Gaps = 52/393 (13%)
Query: 42 KDKDDLHDVVTLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEA--LCLANSLEEQRDGYF 99
K +DD+ VV + R + P + P ++AKL EA L LA LE
Sbjct: 31 KHRDDMRAVVIVPVLKQQRESRDAVAGP-VSPVRSVEAKLEEAKGLALAIDLE------- 82
Query: 100 DTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAI 159
V Q + + R T FG G +E I H+ + G + V+
Sbjct: 83 -------------VTQGLVVPVNQPRPATLFGTGKIEEI-GHLLDETNSG---LVIVDHP 125
Query: 160 LSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPD 219
L+ +QQRNLE+ W V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR
Sbjct: 126 LTPVQQRNLEKQWNAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR----- 180
Query: 220 GRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTR 279
T E R GG GF+ G GET+++ RR + +R L ++E+V RTR
Sbjct: 181 -SWTHLE-----------RQRGGAGFMGGPGETQIEADRRLLQDRIVKLERELEQVVRTR 228
Query: 280 AVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSV 339
+ RA RR+ VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ +
Sbjct: 229 QLHRAKRRKVPHP------IVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRM 282
Query: 340 VLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVL 398
LP G+ V+LSDTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ VL
Sbjct: 283 KLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDMSDPDNAAQSADVL 342
Query: 399 QVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 430
++L +G+ E E K +IEVWNK+D + E D
Sbjct: 343 RILGDLGIDEKEAEKRIIEVWNKVDRLEPEAHD 375
>gi|89054736|ref|YP_510187.1| HSR1-like GTP-binding protein [Jannaschia sp. CCS1]
gi|88864285|gb|ABD55162.1| GTP-binding protein HflX [Jannaschia sp. CCS1]
Length = 435
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 194/331 (58%), Gaps = 30/331 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV ++ +A+ FG G ++ + I + + + ++ ++ +QQRN
Sbjct: 52 LPDLEVVDAQVVRLPRAQPGLLFGSGKIQELHDLIEALD----IGLVLIDGPVTPVQQRN 107
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LER WG +LDR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 108 LEREWGCKLLDRTGLILEIFADRAATREGVLQVELAALSYQRTRLVRA------WTHLE- 160
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E + + Q+ +V +TRA+ R+AR
Sbjct: 161 ----------RQRGGLGFVGGPGETQIEADRRAIDEAVTRIKRQLAKVVKTRALHRSARA 210
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-V 346
+ VA+VGYTNAGKSTL + L+ +D+ + LFATLDP +++V LP G V
Sbjct: 211 KVP------YPIVALVGYTNAGKSTLFNRLTGADVMAKDMLFATLDPTMRAVTLPDGTDV 264
Query: 347 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 406
+LSDTVGFISDLP QLV AF ATLEEV++ADL+VHV D + P E V +L +GV
Sbjct: 265 ILSDTVGFISDLPTQLVAAFRATLEEVLDADLIVHVRDISHPQTVEQAEDVHAILGDLGV 324
Query: 407 SEEKLKNMIEVWNKIDYHDEEMGDVEYIDGD 437
S++ + +EVWNK+D DE ++ D
Sbjct: 325 SDQSAQ--LEVWNKVDLLDEAAQTARQVEAD 353
>gi|241204548|ref|YP_002975644.1| GTP-binding proten HflX [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858438|gb|ACS56105.1| GTP-binding proten HflX [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 441
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 205/357 (57%), Gaps = 51/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKVWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 430
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEAEKRLIEVWNKIDRLEPEVHD 337
>gi|339503334|ref|YP_004690754.1| GTP-binding protein HflX [Roseobacter litoralis Och 149]
gi|338757327|gb|AEI93791.1| GTP-binding protein HflX [Roseobacter litoralis Och 149]
Length = 432
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 195/326 (59%), Gaps = 30/326 (9%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
+ LP VV + + RA FG G ++ IK ++ E ++ + V+ +S +QQ
Sbjct: 47 RALPELEVVGSEIVPLKTVRAGMLFGSGKIDQIKTTLHDEE----VELVLVDGAVSPVQQ 102
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 103 RNLEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHL 156
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I ++ + L Q+E+V +TRA+ RAA
Sbjct: 157 E-----------RQRGGLGFVGGPGETQIEADRRAIDDQLTRLRRQLEKVVKTRALHRAA 205
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG- 344
R + +A+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ + LP G
Sbjct: 206 RAKI------PYPIIALVGYTNAGKSTLFNHLTGADVMAKDMLFATLDPTMRRLRLPDGP 259
Query: 345 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 404
+V+LSDTVGFIS+LP +LV AF ATLEEV+ AD++ HV D + P + V ++ +
Sbjct: 260 EVILSDTVGFISELPTELVAAFRATLEEVLAADVICHVRDISHPETDAQAKDVQDIMTTL 319
Query: 405 GVSEEKLKNMIEVWNKIDYHDEEMGD 430
GV ++ + E+WNK+D EE D
Sbjct: 320 GVEDD--RPAFEIWNKLDLLSEEDAD 343
>gi|424894930|ref|ZP_18318504.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393179157|gb|EJC79196.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 441
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 148/369 (40%), Positives = 207/369 (56%), Gaps = 51/369 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVAIVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGDVEY 433
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEADKRLIEVWNKIDRLEPEVHDAMV 340
Query: 434 IDGDDISNF 442
SN
Sbjct: 341 QKSSGASNV 349
>gi|339022397|ref|ZP_08646343.1| GTP-binding GTPase HflX/HSR1 [Acetobacter tropicalis NBRC 101654]
gi|338750587|dbj|GAA09647.1| GTP-binding GTPase HflX/HSR1 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 200/354 (56%), Gaps = 40/354 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ L R+ T G G V+++K + ++D + V+A L+ QQRNLE
Sbjct: 50 VIVRQAVLLVRAKRSATLLGSGQVDSLKVAVKA----DKIDVLVVDARLTPGQQRNLETE 105
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
+G V+DR GLI++IF A A TKE LQ ELA L Y++SRLVR+ T E
Sbjct: 106 FGCKVIDRTGLILDIFGARAATKEGTLQVELAHLEYQRSRLVRL------WTHLE----- 154
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + R AR+R
Sbjct: 155 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKKELEQVRRTRGLHRQARKRV-- 206
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSD 350
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++++ LPSG +++LSD
Sbjct: 207 ----PFPVVALVGYTNAGKSTLFNALTGATVYAKDQLFATLDPTMRAITLPSGRRIILSD 262
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 406
TVGFISDLP +L+ AF ATLEEV EAD+++HV D P+ + V VL + +
Sbjct: 263 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDIAHPDSAAQKKDVFGVLDGMARDDMI 322
Query: 407 SEEKLKNMIEVWNKIDY--------HDEEMGDVEYIDGDDISNFSRAEDKDTTS 452
+ MIEV NK D E+ + I GD + D+ TS
Sbjct: 323 ESDWASRMIEVMNKADLLGGPDAVPQTEDTVAISAITGDGLPALMDVIDRRITS 376
>gi|392377175|ref|YP_004984334.1| putative GTP-binding protein (HflX-like) [Azospirillum brasilense
Sp245]
gi|356878656|emb|CCC99544.1| putative GTP-binding protein (HflX-like) [Azospirillum brasilense
Sp245]
Length = 419
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 140/316 (44%), Positives = 187/316 (59%), Gaps = 28/316 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + G GTVE H + E + ++ LS +QQRNLE+A
Sbjct: 35 VVHAECARVNRPQPSILLGSGTVE----HFAQIVEETEASLVILDHALSPVQQRNLEKAL 90
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A T+E LQ ELAAL Y+KSRLVR T E
Sbjct: 91 KVKVIDRTGLILEIFGARARTREGMLQVELAALTYQKSRLVR------SWTHLE------ 138
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GE++L++ RR I +R + ++EEVRRTR + R AR +
Sbjct: 139 -----RQRGGFGFLGGPGESQLEMDRRLIGDRIVKIKKELEEVRRTRGLHRKARAK---- 189
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
VA+VGYTNAGKSTL + L+++D+F+ LFATLDP ++ V LPSG KV+LSDT
Sbjct: 190 --VPYPVVALVGYTNAGKSTLFNRLANADVFAKDLLFATLDPTMRQVTLPSGRKVILSDT 247
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFISDLP LV AF ATLEEV AD+++HV D + + E + V +V+ +G+ +
Sbjct: 248 VGFISDLPHGLVAAFRATLEEVDAADIILHVRDVSHQDSEPQKADVHEVMSDMGIDPDAD 307
Query: 412 KNMIEVWNKIDYHDEE 427
+IEV NKID D+E
Sbjct: 308 DRVIEVLNKIDALDDE 323
>gi|126726836|ref|ZP_01742675.1| Putative GTP-binding protein [Rhodobacterales bacterium HTCC2150]
gi|126703794|gb|EBA02888.1| Putative GTP-binding protein [Rhodobacterales bacterium HTCC2150]
Length = 390
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 134/323 (41%), Positives = 190/323 (58%), Gaps = 30/323 (9%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
+ LP V+ N ++ KA+ T FG G +E +K AE ++ + ++ +S +QQ
Sbjct: 5 RALPQLDVLGNTHVRLPKAQPGTLFGKGKIEELKGMFKAAE----VELVVIDGPVSPVQQ 60
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+ W +LDR GLI+EIF+ A T+E LQ E+AAL Y+K+RLVR T
Sbjct: 61 RNLEKEWNVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQKTRLVRA------WTHL 114
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR + E + Q+E+ +TR + RAA
Sbjct: 115 E-----------RQRGGLGFVGGPGETQIESDRRALDEAIIRIRRQLEKTVKTRELHRAA 163
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG- 344
R++ VA+VGYTNAGKST + L+ + +F+ LFATLDP +++V LP+G
Sbjct: 164 RKKV------PYPVVALVGYTNAGKSTFFNHLTGAKVFAKDMLFATLDPTMRAVNLPNGL 217
Query: 345 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 404
V+LSDTVGFISDLP +LV AF ATLE+ + ADL++HV D P E V +L +
Sbjct: 218 DVILSDTVGFISDLPTELVAAFRATLEDALSADLILHVRDIAHPETESQAGNVRTILSSL 277
Query: 405 GVSEEKLKNMIEVWNKIDYHDEE 427
G+ E + IE+WNK D +EE
Sbjct: 278 GIGHETPQ--IEIWNKTDLLNEE 298
>gi|420240081|ref|ZP_14744344.1| GTP-binding protein HflX [Rhizobium sp. CF080]
gi|398077716|gb|EJL68677.1| GTP-binding protein HflX [Rhizobium sp. CF080]
Length = 446
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 204/363 (56%), Gaps = 55/363 (15%)
Query: 69 PRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADT 128
P P +A+L EA+ LA +++ + +VQ + + R T
Sbjct: 24 PAPAPQRSNEARLEEAIGLAKAIDLE------------------IVQGLIVPISQPRPGT 65
Query: 129 FFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
G G +E IK ++ E DA + V+ L+ +QQRNLE+ W V+DR GLI+EI
Sbjct: 66 LMGTGKIEEIKALLD------EHDAGLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEI 119
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A TKE LQ +LA L Y+K RLVR T E R GG GF+
Sbjct: 120 FGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGAGFM 162
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVG 304
G GET+++ RR + ER L ++E+V RTR + RA RR+ H VA+VG
Sbjct: 163 GGPGETQIEADRRLLQERIVKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVG 214
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLV 363
YTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV
Sbjct: 215 YTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISNLPTHLV 274
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKID 422
AF ATLEEV+EADL++HV D + P+ V+++L +G+ E E K +IEVWNKID
Sbjct: 275 AAFRATLEEVLEADLVLHVRDMSDPDNAAQAGDVMRILSDLGIDEKEAAKRIIEVWNKID 334
Query: 423 YHD 425
D
Sbjct: 335 RLD 337
>gi|319405766|emb|CBI79389.1| GTP-binding protein HflX [Bartonella sp. AR 15-3]
Length = 444
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 130/316 (41%), Positives = 186/316 (58%), Gaps = 28/316 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V+ + + + T F G V +IN + ++ V+ L+ +QQRNLE+ W
Sbjct: 61 VIHYEIINIARPCSSTLFKIGKVNEFAHYIN----EHQIMLSIVDHFLTPVQQRNLEKLW 116
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 117 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE------ 164
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + + + ++E V +TRA+ RA R++
Sbjct: 165 -----RQRGGSGFLGGPGETQIEADRRLLQNKIISIRRELETVVKTRALHRAKRKKIPH- 218
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
+A+VGYTNAGKSTL + LS+S++ + LFATLDP L+ +VLP G+ VLLSDT
Sbjct: 219 -----PVIALVGYTNAGKSTLFNRLSNSNVLAKNMLFATLDPTLRKIVLPHGQTVLLSDT 273
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEV+EADL++HV D + P+ H V+++L +G+ +
Sbjct: 274 VGFISNLPTHLIAAFRATLEEVIEADLILHVRDASDPDHHAHAQDVVEILSSLGIDINNI 333
Query: 412 KNMIEVWNKIDYHDEE 427
+++E+WNKID D+
Sbjct: 334 DHIVEIWNKIDMLDQH 349
>gi|338732604|ref|YP_004671077.1| GTP-binding protein hflX [Simkania negevensis Z]
gi|336481987|emb|CCB88586.1| GTP-binding protein hflX [Simkania negevensis Z]
Length = 435
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/312 (40%), Positives = 182/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV +NP K A T+ G G +E ++ A + + D + + +S QQRNLE+
Sbjct: 54 VVSKNPC-PLRKIEASTYIGKGKIEELQ----AAADESKADVVIFDDEISPNQQRNLEKI 108
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
+ +PV+DR LI+EIF+ A T+EAKLQ ELA Y+ RL R+ R
Sbjct: 109 FKRPVIDRTELILEIFSQRAQTREAKLQVELAKSHYQLPRLKRLWTHLSR---------- 158
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+ + G+GF+ GAGE +++L RR + +R S L ++IEEVR R VQR AR R
Sbjct: 159 ------QVASGKGFLKGAGERQIELDRRMVRDRISRLKNEIEEVRHQRDVQRHARIR--- 209
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
G+ T A++GYTN GKSTL+ AL+ +++ + +LFATLD + LP+ + +LL D
Sbjct: 210 ---SGVPTFAIIGYTNVGKSTLLHALTQAEVLIEDKLFATLDTTTRKFTLPNHQEILLID 266
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +P LV AF +TLEE + D+L+H++D P EEH + +VL+++G
Sbjct: 267 TVGFIRKIPHTLVAAFKSTLEEAMYTDILLHLVDINHPLAEEHAESTYEVLKELGAEG-- 324
Query: 411 LKNMIEVWNKID 422
K MI V NKID
Sbjct: 325 -KPMITVLNKID 335
>gi|116252041|ref|YP_767879.1| GTP-binding protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115256689|emb|CAK07777.1| putative GTP-binding protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 441
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 205/357 (57%), Gaps = 51/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 430
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEAEKRLIEVWNKIDRLEPEVHD 337
>gi|398821352|ref|ZP_10579819.1| GTP-binding protein HflX [Bradyrhizobium sp. YR681]
gi|398227980|gb|EJN14135.1| GTP-binding protein HflX [Bradyrhizobium sp. YR681]
Length = 459
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 141/306 (46%), Positives = 187/306 (61%), Gaps = 32/306 (10%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGL 182
R T+ G G VE I A LDA + ++ L+ IQQRNLE+ VLDR GL
Sbjct: 80 RPATYIGKGKVEEI------AALAKSLDAELVVMDCALAPIQQRNLEKELQAKVLDRTGL 133
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A TKE LQ ELA L Y++SRLVR T E R GG
Sbjct: 134 ILEIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGG 176
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
GF+ G GET+++ RR I ER S L ++++V+ TR + RA R+R VA+
Sbjct: 177 FGFMGGPGETQIEADRRLIQERISKLEGELKKVQATRRLHRAGRQRVP------YRVVAL 230
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQ 361
VGYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP Q
Sbjct: 231 VGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQ 290
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEEV+EAD+++HV D + + E ++ V VL+Q+G++ + +IEVWNKI
Sbjct: 291 LVAAFRATLEEVLEADVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKI 350
Query: 422 DYHDEE 427
D +D E
Sbjct: 351 DRYDAE 356
>gi|323136434|ref|ZP_08071516.1| GTP-binding proten HflX [Methylocystis sp. ATCC 49242]
gi|322398508|gb|EFY01028.1| GTP-binding proten HflX [Methylocystis sp. ATCC 49242]
Length = 444
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 200/353 (56%), Gaps = 50/353 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
A+L+EA+ LA ++ D D +V + S+ + R T+ G G V+
Sbjct: 38 HARLSEAVGLAQAI--------DLD----------IVGDISVSLNEVRPATYLGKGKVDE 79
Query: 138 IKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
I AE+ E +A + ++ LS +QQRNLE+AWG V+DR GLI+EIF A TKE
Sbjct: 80 I------AETVKEREAGLVSMDCQLSPVQQRNLEKAWGAKVIDRTGLILEIFGQRARTKE 133
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
LQ ELA L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 134 GALQVELAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIE 176
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR I ER + +++V+RTR + R RR VA+VGYTNAGKSTL +
Sbjct: 177 TDRRLIEERMRRIEQDLDKVKRTRGLHRKTRREVP------YPVVALVGYTNAGKSTLFN 230
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVV 374
L+ +++ + LFATLDP L+ + LP G +VLLSDTVGFISDLP LV AF ATLEEV
Sbjct: 231 RLTKAEVLAQDMLFATLDPTLRQIRLPHGARVLLSDTVGFISDLPTMLVSAFRATLEEVT 290
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
AD+++HV D + + E V +L ++G+ E ++EVWNKID D E
Sbjct: 291 LADVILHVRDVSHEDSEAQARDVETILDELGLKGEAEGRILEVWNKIDALDPE 343
>gi|319404324|emb|CBI77919.1| GTP-binding protein HflX [Bartonella rochalimae ATCC BAA-1498]
Length = 448
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 183/316 (57%), Gaps = 28/316 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + T F G +IN + + V+ L+ +QQRNLE+ W
Sbjct: 61 VVHYEIINIAKPCSSTLFRIGKANEFAHYIN----EHHIMLSIVDHFLTPVQQRNLEKLW 116
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A TKE LQ ELA L Y+KSRLVR T E
Sbjct: 117 NCKVIDRTALILEIFGDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE------ 164
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + + + ++E V +TRA+ RA R+R
Sbjct: 165 -----RQRGGTGFLGGPGETQIEADRRLLQNKIISIRRELETVVKTRALHRAKRKRIPHP 219
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
+A+VGYTNAGKSTL + LSDS++ ++ LFATLDP L+ +VLP G+ VLLSDT
Sbjct: 220 ------VIALVGYTNAGKSTLFNHLSDSNVLAEDMLFATLDPTLRKIVLPHGQTVLLSDT 273
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP L+ AF ATLEEV+EADL++HV D + P+ H V ++L +GV
Sbjct: 274 VGFISNLPTHLIAAFRATLEEVIEADLILHVRDVSDPDHYAHAQDVFEILSDLGVDINDT 333
Query: 412 KNMIEVWNKIDYHDEE 427
+++E+WNKID D+
Sbjct: 334 DHIVEIWNKIDTLDQH 349
>gi|407778947|ref|ZP_11126207.1| GTP-binding proten HflX [Nitratireductor pacificus pht-3B]
gi|407299231|gb|EKF18363.1| GTP-binding proten HflX [Nitratireductor pacificus pht-3B]
Length = 458
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 204/377 (54%), Gaps = 57/377 (15%)
Query: 63 RLFLVQPRLK-----------PPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPH 111
R F+V P L P +A+ EA+ LA +++ Q
Sbjct: 25 RAFVVSPVLAADRRAAESGTTPARSPEARSEEAVGLAEAIDLQ----------------- 67
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV + G R T G G ++ + + ++ E++ + ++ L+ +QQRNLE+A
Sbjct: 68 -VVSAEIIPVGTPRPATLIGTGKLDDLAARV----AEAEIEVVIIDHPLTPVQQRNLEKA 122
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
VLDR GLI+EIF A TKE +LQ ELA L Y++ RLVR T E
Sbjct: 123 LNAKVLDRTGLILEIFGRRARTKEGRLQVELAHLEYQRGRLVR------SWTHLE----- 171
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR + +R L ++E VRRTR + R+ RR+
Sbjct: 172 ------RQRGGGGFMGGPGETQIEADRRLLQDRIVRLKRELETVRRTRDLHRSKRRKVP- 224
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
VA+VGYTNAGKSTL + L+ + + ++ LFATLDP L+ V LP G ++LSD
Sbjct: 225 -----FPIVAIVGYTNAGKSTLFNRLTGAAVMAEDMLFATLDPTLRRVQLPHGTTIILSD 279
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFISDLP LV AF ATLEEV+EADL++H+ D + P V ++L +GV
Sbjct: 280 TVGFISDLPTHLVAAFRATLEEVIEADLVIHLRDISDPASSAQAADVEEILGDLGVDVAD 339
Query: 411 LKNMIEVWNKIDYHDEE 427
K+++EVWNKID D E
Sbjct: 340 KKHVLEVWNKIDNLDAE 356
>gi|406989154|gb|EKE08965.1| hypothetical protein ACD_16C00232G0025 [uncultured bacterium]
Length = 435
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 199/346 (57%), Gaps = 46/346 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA LA +++ G +FF K R T+ G VE
Sbjct: 36 EARLEEARGLAEAIQLDVKG---EEFF---------------KQHTIRPSTYISKGHVEE 77
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+K I + K +F++A +S +QQRNLE+ W V+DR GLI+EIF A A T E +
Sbjct: 78 LKGPIKALDVK----LVFIDAAISPVQQRNLEKIWNCKVIDRTGLILEIFGARARTAEGR 133
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELAAL Y++SRLVR T E R GG GFI G GET+L+L
Sbjct: 134 LQVELAALTYQRSRLVR------SWTHLE-----------RQRGGLGFIGGPGETQLELD 176
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + + +V++TR + R AR+R VA+VGYTNAGKSTL + L
Sbjct: 177 RRLIDERIMRIKKDLHKVQQTRTLHRKARKR------VPYPVVALVGYTNAGKSTLFNRL 230
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ + + ++ LFATLDP ++ V LPS + ++LSDTVGFIS+LP LV AF ATLEEV+EA
Sbjct: 231 TQAGVMAENILFATLDPTMRRVTLPSRREIILSDTVGFISELPTLLVAAFRATLEEVMEA 290
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
DL++HV D + P + + VL V+ ++G+ + ++ IEV NK D
Sbjct: 291 DLILHVRDVSHPESKSQQEDVLNVIAELGLEKAYEEHGIEVLNKAD 336
>gi|424890490|ref|ZP_18314089.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393172708|gb|EJC72753.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 468
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 149/369 (40%), Positives = 208/369 (56%), Gaps = 51/369 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLALAI--------DLDVVNGQVVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK +N +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLNERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGDVEY 433
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEADKRLIEVWNKIDRLEPEVHDAMV 340
Query: 434 IDGDDISNF 442
SN
Sbjct: 341 QKSSGASNV 349
>gi|408380313|ref|ZP_11177897.1| GTP-binding protein HFLX [Agrobacterium albertimagni AOL15]
gi|407745526|gb|EKF57058.1| GTP-binding protein HFLX [Agrobacterium albertimagni AOL15]
Length = 444
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 205/357 (57%), Gaps = 51/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA +++ +VQ ++ + R T G G +
Sbjct: 31 EARLEEAIGLARAID------------------LTIVQGLIVQINQPRPATLMGSGKIAE 72
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+K ++ E L + V+ L+ +QQRNLE+ WG V+DR GLI+EIF A TKE
Sbjct: 73 VKALLD--EHNAGL--VIVDHPLTPVQQRNLEKEWGAKVIDRTGLILEIFGRRASTKEGT 128
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 129 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGAGFMGGPGETQIEAD 171
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR++ ++ L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 172 RRQLQDKIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 223
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V++SDTVGFISDLP LV AF ATLEEV+
Sbjct: 224 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVIMSDTVGFISDLPTHLVAAFRATLEEVL 283
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 430
EADL++HV D + P+ VL++L +G+ E E+ + ++EVWNKID D E D
Sbjct: 284 EADLVLHVRDMSDPDNGAQSADVLRILDDLGIDEKERAERILEVWNKIDRLDPENHD 340
>gi|110679965|ref|YP_682972.1| GTP-binding protein HflX [Roseobacter denitrificans OCh 114]
gi|109456081|gb|ABG32286.1| GTP-binding protein HflX, putative [Roseobacter denitrificans OCh
114]
Length = 432
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 157/409 (38%), Positives = 226/409 (55%), Gaps = 54/409 (13%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
+ LP VV + RA FG G ++ IK ++ E ++ + V+ +S +QQ
Sbjct: 47 RALPELEVVGADIVPLKTVRAGMLFGSGKIDEIKKSLHDEE----IELVLVDGPVSPVQQ 102
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 103 RNLEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHL 156
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I ++ + L Q+E+V +TRA+ RAA
Sbjct: 157 E-----------RQRGGLGFVGGPGETQIEADRRAIDDQLTRLRRQLEKVVKTRALHRAA 205
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG- 344
R + +A+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ + LP G
Sbjct: 206 RAKI------PYPIIALVGYTNAGKSTLFNHLTGADVMAKDMLFATLDPTMRRLRLPDGP 259
Query: 345 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 404
+V+LSDTVGFISDLP +LV AF ATLEEV+ AD++ HV D + P E V ++ +
Sbjct: 260 EVILSDTVGFISDLPTELVAAFRATLEEVLAADVICHVRDISHPETEAQAKDVQDIMTTL 319
Query: 405 GVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYG 464
GV E+ + E+WNK+D E G+ + +RA D+D + V I
Sbjct: 320 GVEED--RPTFELWNKLDLLSE---------GEADAMRARA-DRDPS-----VFAISALS 362
Query: 465 GDDADNNDGFVSEDL-GESMNKNHN-DYSDG----WLLSGDEQDNVEEE 507
G+ D V++ L G+ +S+G WL EQ+ VEEE
Sbjct: 363 GEGLDGLLAAVTQTLQGKKRAATLTLSFSEGRKRAWLF---EQELVEEE 408
>gi|254294018|ref|YP_003060041.1| GTP-binding proten HflX [Hirschia baltica ATCC 49814]
gi|254042549|gb|ACT59344.1| GTP-binding proten HflX [Hirschia baltica ATCC 49814]
Length = 445
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 177/305 (58%), Gaps = 35/305 (11%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K A FG G ++ I ++ E + + V+ LS IQQRNLE V+DR GL
Sbjct: 58 KPNAAKLFGAGQLDLISERLDDCEG----NLLVVDCSLSPIQQRNLENTLNVKVMDRTGL 113
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A + E +LQ E+A +Y++SRLVR T E R GG
Sbjct: 114 ILEIFGVRARSAEGRLQVEMARQLYERSRLVRT------WTHLE-----------RQRGG 156
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
GF++G GE++L+ RR + R + L S +E VRRTR +QRA R+R RG VA+
Sbjct: 157 TGFLAGPGESQLEADRRMLDGRIAKLKSDLEAVRRTRRLQRAGRKR------RGAPIVAL 210
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQ 361
GYTNAGKSTL ++L+ S +F+ FATLDP + V L SG K+ + DTVGFI+DLP
Sbjct: 211 AGYTNAGKSTLFNSLTHSSVFAADMPFATLDPTARDVELSSGKKISMIDTVGFITDLPTH 270
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN----MIEV 417
L+++F AT+EE +EADLL+HV D + P + + V VL ++ E+ L +IEV
Sbjct: 271 LIESFRATIEEAIEADLLLHVRDISHPETDRQSSDVNDVLTKL---EQDLNADRPPVIEV 327
Query: 418 WNKID 422
WNK D
Sbjct: 328 WNKSD 332
>gi|424870516|ref|ZP_18294178.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393166217|gb|EJC66264.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 441
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 205/357 (57%), Gaps = 51/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D + + + P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLNVVNGSIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLER W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEREWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 430
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEAEKRLIEVWNKIDRLEPEVHD 337
>gi|163852243|ref|YP_001640286.1| GTP-binding proten HflX [Methylobacterium extorquens PA1]
gi|218531002|ref|YP_002421818.1| GTP-binding proten HflX [Methylobacterium extorquens CM4]
gi|163663848|gb|ABY31215.1| GTP-binding proten HflX [Methylobacterium extorquens PA1]
gi|218523305|gb|ACK83890.1| GTP-binding proten HflX [Methylobacterium extorquens CM4]
Length = 471
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 198/350 (56%), Gaps = 47/350 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L+EA+ LA ++E D V +Q P R T+ G G VE
Sbjct: 54 EARLDEAVGLAAAIE-----------LDVTRAISVHIQRP-------RPSTYLGKGRVEE 95
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I I E + + ++ LS +QQRNLE+AWG V+DR GLI+EIF A T+E
Sbjct: 96 IAGLIKAEE----IGLVVMDCALSPVQQRNLEKAWGAKVIDRTGLILEIFGRRASTREGT 151
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ E A L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 152 LQVEHAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 194
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + + +E V RTR + R +R R VA+VGYTNAGKSTL +AL
Sbjct: 195 RRMIQERMTRIERDLEAVTRTRGLHRKSRARV------PYPIVALVGYTNAGKSTLFNAL 248
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ +++ + LFATLDP ++ LP G+ V+LSDTVGFISDLP L+ AF ATLE+V+EA
Sbjct: 249 TKAEVRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEA 308
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
D+L+HV D + + + V VL+++G+ E + +IEVWNK D DE
Sbjct: 309 DILLHVRDVSHGDTQAQAEDVEGVLRELGI-EADAERIIEVWNKADLLDE 357
>gi|424910276|ref|ZP_18333653.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392846307|gb|EJA98829.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 468
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 216/398 (54%), Gaps = 63/398 (15%)
Query: 42 KDKDDLHDVV---TLFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEA--LCLANSLEEQRD 96
K +DD+ VV L RD D L R ++AKL EA L LA LE
Sbjct: 21 KHRDDMRAVVLVPVLKQRDTRDAAALPAAAGR-----SVEAKLEEAKGLALAIDLE---- 71
Query: 97 GYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFV 156
V Q + + R T FG G +E I H+ + G + V
Sbjct: 72 ----------------VTQGLIVAVNQPRPATLFGTGKIEEI-GHLLDETNSG---LVIV 111
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR
Sbjct: 112 DHPLTPVQQRNLEKHWNAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR-- 169
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
T E R GG GF+ G GET+++ RR + ER L ++E+V
Sbjct: 170 ----SWTHLE-----------RQRGGAGFMGGPGETQIEADRRLLQERIVKLERELEQVV 214
Query: 277 RTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDP 334
RTR + RA RR+ H VA+VGYTNAGKSTL + ++ + + ++ LFATLDP
Sbjct: 215 RTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDP 266
Query: 335 RLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEH 393
L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+EADL++HV D + P+
Sbjct: 267 TLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDMSDPDNAAQ 326
Query: 394 RTTVLQVLQQVGVSEEKLKN-MIEVWNKIDYHDEEMGD 430
VL++L +G+ E++ ++ +IEVWNK+D D E D
Sbjct: 327 SADVLRILGDLGIDEKEAEHRIIEVWNKVDRLDPEAHD 364
>gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b]
gi|149811066|gb|EDM70903.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b]
Length = 425
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 192/322 (59%), Gaps = 31/322 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV ++ + T FG G +E + I+ E ++ + ++ ++ +QQRN
Sbjct: 41 LPGLDVVGAQVVRVRQPHPGTLFGKGKLEELHALIDAQE----IELVLIDGPVTPVQQRN 96
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 97 LEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHLE- 149
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ L Q+ +V RTR + RAAR
Sbjct: 150 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLSKVVRTRELHRAARA 199
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG--K 345
+ VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ + LP G +
Sbjct: 200 K------VPFPIVALVGYTNAGKSTLFNRMTGADVMAKDMLFATLDPTMRRIELPGGGPE 253
Query: 346 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 405
V+LSDTVGFISDLP +LV AF ATLEEV+ ADL+VHV D + P E V +L+ +G
Sbjct: 254 VILSDTVGFISDLPTELVAAFRATLEEVLAADLIVHVRDISHPESEAQARDVRTILESLG 313
Query: 406 VSEEKLKNMIEVWNKIDYHDEE 427
V + + IEVWNKID D+E
Sbjct: 314 VRDSIPQ--IEVWNKIDKLDDE 333
>gi|254469962|ref|ZP_05083367.1| GTP-binding proten HflX [Pseudovibrio sp. JE062]
gi|211961797|gb|EEA96992.1| GTP-binding proten HflX [Pseudovibrio sp. JE062]
Length = 491
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 203/352 (57%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
QA+L EA+ LA ++E + +V + ++ + + FG G VE
Sbjct: 63 QARLEEAVGLAAAIELE------------------IVSSSLVRLANVKPGSLFGSGKVEE 104
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I+ I E ++ + V+ L+ IQQRNLER W V+DR GLI+EIF A TKE +
Sbjct: 105 IRGQIEIEE----IELVVVDHPLTPIQQRNLERDWNTKVIDRTGLILEIFGERAQTKEGR 160
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L ++KSRLVR T E R GG GF+ G GET+++
Sbjct: 161 LQVELAHLTWQKSRLVR------SWTHLE-----------RQRGGLGFVGGPGETQIEAD 203
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR I +R + L Q+E+V+RTR + R R++ H +A VGYTNAGKSTL +
Sbjct: 204 RRIIQDRITLLKGQLEQVQRTRKLHRKQRKKVPH--------PVIAFVGYTNAGKSTLFN 255
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++++++F+ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEV+
Sbjct: 256 RMTNAEVFAKDLLFATLDPTLRRLKLPHGREVILSDTVGFISELPHNLVAAFRATLEEVI 315
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
+AD+++HV D + + V + L+ +G+ + +IEV+NKID DE
Sbjct: 316 QADIVLHVRDIAHEDTKAQSLDVNETLEMLGLKVSESDRVIEVYNKIDKLDE 367
>gi|254561989|ref|YP_003069084.1| GTPase [Methylobacterium extorquens DM4]
gi|254269267|emb|CAX25233.1| putative GTPase (HflX) [Methylobacterium extorquens DM4]
Length = 471
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 198/350 (56%), Gaps = 47/350 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L+EA+ LA ++E D V +Q P R T+ G G VE
Sbjct: 54 EARLDEAVGLAAAIE-----------LDVTRAISVHIQRP-------RPSTYLGKGRVEE 95
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I I E + + ++ LS +QQRNLE+AWG V+DR GLI+EIF A T+E
Sbjct: 96 IAGLIKAEE----IGLVVMDCALSPVQQRNLEKAWGAKVIDRTGLILEIFGRRASTREGT 151
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ E A L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 152 LQVEHAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 194
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + + +E V RTR + R +R R VA+VGYTNAGKSTL +AL
Sbjct: 195 RRMIQERMTRIERDLEAVTRTRGLHRKSRARV------PYPIVALVGYTNAGKSTLFNAL 248
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ +++ + LFATLDP ++ LP G+ V+LSDTVGFISDLP L+ AF ATLE+V+EA
Sbjct: 249 TKAEVRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEA 308
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
D+L+HV D + + + V VL+++G+ E + +IEVWNK D DE
Sbjct: 309 DILLHVRDVSHGDTQAQAEDVEGVLRELGI-EADAERIIEVWNKADLLDE 357
>gi|117923594|ref|YP_864211.1| HSR1-like GTP-binding protein [Magnetococcus marinus MC-1]
gi|347602422|sp|A0L4B2.1|HFLX_MAGSM RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|117607350|gb|ABK42805.1| GTP-binding protein, HSR1-related protein [Magnetococcus marinus
MC-1]
Length = 432
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 181/301 (60%), Gaps = 31/301 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
KA T+FG G VE + I + E+D VN L+ IQQRNLE+ V+DR GL
Sbjct: 54 KAVPATYFGSGQVEELARRIE----EDEIDVAVVNHALTPIQQRNLEKKLNAKVVDRTGL 109
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A A T+E +Q ELA+LMY++SRLVR T E V
Sbjct: 110 ILEIFAARARTREGIMQVELASLMYQQSRLVR------SWTHLERQRGGVGLR------- 156
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G GE ++++ RR I ER L Q+EEV RTRA+QR R+ L TVA+
Sbjct: 157 ----GGPGERQIEVDRRLIRERIHKLKKQLEEVERTRALQRQPRQ------DIPLFTVAL 206
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQ 361
VGYTNAGKSTL + L+ + + ++ +LFATLDP +++V LP G++LLSDTVGFI LP Q
Sbjct: 207 VGYTNAGKSTLFNLLTRAGVLAEDKLFATLDPTMRAVDLPDGGRILLSDTVGFIRQLPHQ 266
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEEV+ AD+L+HV+D + P E + +V VLQ++ V + + V+NKI
Sbjct: 267 LVAAFKATLEEVMSADMLLHVVDLSDPEWERYVESVNGVLQELEVQHTR---TLTVYNKI 323
Query: 422 D 422
D
Sbjct: 324 D 324
>gi|85703310|ref|ZP_01034414.1| GTP-binding protein HflX [Roseovarius sp. 217]
gi|85672238|gb|EAQ27095.1| GTP-binding protein HflX [Roseovarius sp. 217]
Length = 424
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/324 (42%), Positives = 194/324 (59%), Gaps = 31/324 (9%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
+ LP VV + ++ K A FG G +E ++ A +++ + V+ ++ +QQ
Sbjct: 38 QALPDIDVVGSDVVRLRKPDAGRLFGKGKLE----ELHQAMEAADVELVLVDGPVTPVQQ 93
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 94 RNLEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHL 147
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I ++ L Q+E+V +TR + RAA
Sbjct: 148 E-----------RQRGGLGFVGGPGETQIEADRRAIDDQLVRLRRQLEKVAKTRTLHRAA 196
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG- 344
R + VA+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ V LP G
Sbjct: 197 RAKV------PFPIVALVGYTNAGKSTLFNRLTGADVMAKDMLFATLDPTMRRVALPEGG 250
Query: 345 -KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 403
+V+LSDTVGFISDLP +LV AF ATLEEV+ ADL+ HV D + P V +L+
Sbjct: 251 PEVILSDTVGFISDLPTELVAAFRATLEEVLSADLICHVRDISHPETVSQSRDVAAILES 310
Query: 404 VGVSEEKLKNMIEVWNKIDYHDEE 427
+GVS++ IE+WNKID ++E
Sbjct: 311 LGVSDK--TPQIEIWNKIDQLEDE 332
>gi|383649571|ref|ZP_09959977.1| HSR1-like GTP-binding protein [Sphingomonas elodea ATCC 31461]
Length = 430
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 208/381 (54%), Gaps = 52/381 (13%)
Query: 52 TLFNRDPDDPPR---LFLVQPRLKPPTF-LQAKLNEALCLANSLEEQRDGYFDTDFFDKE 107
T F RDPD+ R +V P + + +A+L E LA ++
Sbjct: 3 TGFERDPDEFARGAKALVVYPDMGGSSRDAEARLEETAGLAAAIGVD------------- 49
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
VV+ +++ + + T G G VE + + GEL +A L+ +QQRN
Sbjct: 50 -----VVERVAVRLRQPKPGTLIGSGQVEALAETVR----DGELQLAVFDAALTPVQQRN 100
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE A G V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 101 LETALGCKVIDRTGLILEIFGERARTAEGRLQVELAHLDYQAGRLVR------SWTHLE- 153
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I +R + L ++++V RTR + R R+
Sbjct: 154 ----------RQRGGFGFLGGPGETQIEADRRLIRDRMARLRRELDQVSRTRTLHRDRRQ 203
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKV 346
R VA+VGYTNAGKSTL + L+ +++ ++ LFATLDP L+ + LP K
Sbjct: 204 RAP------WPVVALVGYTNAGKSTLFNRLTGAEVMAENLLFATLDPTLRQISLPGIDKA 257
Query: 347 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 406
+LSDTVGF+S+LP QLV AF ATLEEVV ADLL+HV D P+ E R V +VLQ++GV
Sbjct: 258 ILSDTVGFVSELPTQLVAAFKATLEEVVSADLLIHVRDIAHPDTEAQRVDVEKVLQEIGV 317
Query: 407 SEEKLKNMIEVWNKIDYHDEE 427
SE + E WNK+D D+E
Sbjct: 318 SEHTPR--FEAWNKLDLLDDE 336
>gi|240139575|ref|YP_002964051.1| GTPase (HflX) [Methylobacterium extorquens AM1]
gi|418059980|ref|ZP_12697911.1| GTP-binding proten HflX [Methylobacterium extorquens DSM 13060]
gi|240009548|gb|ACS40774.1| putative GTPase (HflX) [Methylobacterium extorquens AM1]
gi|373566474|gb|EHP92472.1| GTP-binding proten HflX [Methylobacterium extorquens DSM 13060]
Length = 471
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 198/350 (56%), Gaps = 47/350 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L+EA+ LA ++E D V +Q P R T+ G G VE
Sbjct: 54 EARLDEAVGLAAAIE-----------LDVTRAISVHIQRP-------RPSTYLGKGRVEE 95
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I I E + + ++ LS +QQRNLE+AWG V+DR GLI+EIF A T+E
Sbjct: 96 IAGLIKAEE----IGLVVMDCALSPVQQRNLEKAWGAKVIDRTGLILEIFGRRASTREGT 151
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ E A L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 152 LQVEHAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 194
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + + +E V RTR + R +R R VA+VGYTNAGKSTL +AL
Sbjct: 195 RRMIQERMTRIERDLEAVTRTRGLHRKSRARV------PYPIVALVGYTNAGKSTLFNAL 248
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ +++ + LFATLDP ++ LP G+ V+LSDTVGFISDLP L+ AF ATLE+V+EA
Sbjct: 249 TKAEVRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEA 308
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
D+L+HV D + + + V VL+++G+ E + +IEVWNK D DE
Sbjct: 309 DILLHVRDVSHGDTQAQADDVEGVLRELGI-EADAERIIEVWNKADLLDE 357
>gi|254451323|ref|ZP_05064760.1| GTP-binding proten HflX [Octadecabacter arcticus 238]
gi|198265729|gb|EDY89999.1| GTP-binding proten HflX [Octadecabacter arcticus 238]
Length = 449
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 256/500 (51%), Gaps = 82/500 (16%)
Query: 63 RLFLVQPRLKPPT---FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSL 119
R +++ P +K ++ L E + LA++L E E+ VV P +
Sbjct: 9 RAYVLHPEIKSDNKRRNAKSALEEGVALAHALPEL------------EVAGSQVVSLPKM 56
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
G FG G ++ IK + A++ + ++ +S +QQRNLE+ WG +LDR
Sbjct: 57 HPG-----MLFGKGKIQEIKGWLEDAKAG----LVLIDGHVSPVQQRNLEKEWGVKLLDR 107
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E R
Sbjct: 108 TGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQ 150
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG GF+ G GET+++ RR I + ++L Q+ +V +TR + R AR +
Sbjct: 151 RGGLGFVGGPGETQVEADRRAIDLQLNNLKKQLSKVVKTRELHRKARAK------VPYPI 204
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDL 358
VA+VGYTNAGKSTL + LS +D+F+ LFATLDP ++ V LP+G +V++SDTVGFISDL
Sbjct: 205 VALVGYTNAGKSTLFNRLSGADVFAHDMLFATLDPTMRKVELPNGDEVIMSDTVGFISDL 264
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P QLV +F ATLEEV+EAD+++HV D + P E + VL L+Q+ V+ + MIEV
Sbjct: 265 PTQLVASFRATLEEVLEADIILHVRDISHPQSAEQKKAVLDTLRQLDVNPD--VPMIEVL 322
Query: 419 NKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN---NDGFV 475
NKID + E D + + DK V E +D D D+ +
Sbjct: 323 NKIDLLEPE-------DAGYLQALHKDNDKVFGISAVTGEGLDRLLNDVTDHLIVQTRTL 375
Query: 476 SEDLGESMN------------KNHNDYSDGWLL----SGDEQDNVEEEFWNAAEDQQPES 519
+ DL +M ++ GW L + +Q + E++F +A DQ E
Sbjct: 376 TLDLDWAMGAAQSWLRAEGVIESEAQTDTGWTLDVRWTTRQQAHFEKQFPDAFPDQVVED 435
Query: 520 TKDVCVMEKDSQSQDQHAPD 539
T ++D+ S D H D
Sbjct: 436 T------DEDAPSGDYHPLD 449
>gi|389691223|ref|ZP_10180116.1| GTP-binding protein HflX [Microvirga sp. WSM3557]
gi|388589466|gb|EIM29755.1| GTP-binding protein HflX [Microvirga sp. WSM3557]
Length = 464
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 184/311 (59%), Gaps = 28/311 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
++Q+ R TF G G VE + I AE G + ++ LS +QQRNLE+AW
Sbjct: 73 IIQSLIAPLASPRPATFIGSGKVEELAGLIR-AEDIG---LVVMDCALSPVQQRNLEKAW 128
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR GLI+EIF A T+E LQ ELA L Y+K RLVR T E
Sbjct: 129 GAKVIDRTGLILEIFGRRARTREGTLQVELAHLSYQKGRLVR------SWTHLE------ 176
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ER + + +E V +TR++ R +RRR
Sbjct: 177 -----RQRGGFGFLGGPGETQIEADRRLIQERMNRIERDLESVVKTRSLHRTSRRRVP-- 229
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
+A+VGYTNAGKSTL + ++ +D+ ++ LFATLDP +++ LP G K +LSDT
Sbjct: 230 ----YPIIALVGYTNAGKSTLFNRMTQADVLAENMLFATLDPTSRAIELPHGEKAILSDT 285
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFISDLP LV AF ATLE+VVEAD+L+HV D + E V VL+++G+ +
Sbjct: 286 VGFISDLPTMLVAAFRATLEDVVEADVLLHVRDVSHGETEAQAGDVAVVLRELGIDPDDT 345
Query: 412 KNMIEVWNKID 422
+ ++EVWNK D
Sbjct: 346 RRVVEVWNKAD 356
>gi|421589086|ref|ZP_16034283.1| GTP-binding protein, partial [Rhizobium sp. Pop5]
gi|403706055|gb|EJZ21445.1| GTP-binding protein, partial [Rhizobium sp. Pop5]
Length = 403
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 206/357 (57%), Gaps = 51/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGQVVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRLLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 430
EADL++HV D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEAGKRLIEVWNKIDRLEPEVHD 337
>gi|337268990|ref|YP_004613045.1| GTP-binding proten HflX [Mesorhizobium opportunistum WSM2075]
gi|336029300|gb|AEH88951.1| GTP-binding proten HflX [Mesorhizobium opportunistum WSM2075]
Length = 468
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 191/343 (55%), Gaps = 33/343 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G VE + E EL + V+ L+ +QQRNLE+ VLDR GLI+
Sbjct: 85 RPATLLGSGKVEEFAEIVK--ERHAEL--VIVDHPLTPVQQRNLEKELNAKVLDRTGLIL 140
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y+K RLVR T E R GG G
Sbjct: 141 EIFGERARTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGAG 183
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR++ E+ L ++E VRRTR + RA R++ VA+VG
Sbjct: 184 FLGGPGETQIESDRRQLQEKIIKLKHELETVRRTRDLHRAKRKK------VPFPVVAIVG 237
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +D+ + LFATLDP L+ V LP G ++LSDTVGFISDLP L+
Sbjct: 238 YTNAGKSTLFNRLTGADVLAQDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDLPTHLI 297
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEVVEADL++H+ D + P+ V ++L +GV K +IEVWNKID
Sbjct: 298 AAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVERILADLGVDAGDAKRVIEVWNKIDQ 357
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 466
DE G+ + D++ A K P+ V + G D
Sbjct: 358 LDE--GNRSRLLAPDMAKGGAAGSK---GPPIAVSAVTGEGID 395
>gi|386395331|ref|ZP_10080109.1| GTP-binding protein HflX [Bradyrhizobium sp. WSM1253]
gi|385735957|gb|EIG56153.1| GTP-binding protein HflX [Bradyrhizobium sp. WSM1253]
Length = 460
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 186/304 (61%), Gaps = 28/304 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I G + ++ + ++ L+ IQQRNLE+ VLDR GLI+
Sbjct: 80 RPATYIGKGKVEEIAALAKGLD----VELVVMDCALAPIQQRNLEKELQAKVLDRTGLIL 135
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y++SRLVR T E R GG G
Sbjct: 136 EIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 178
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER S L ++++V+ TR + RA R+R VA+VG
Sbjct: 179 FMGGPGETQIEADRRLIQERISKLEGELKKVQATRRLHRAGRQRVP------YRVVALVG 232
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP QLV
Sbjct: 233 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLV 292
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EAD+++HV D + + E ++ V VL+Q+G++ + +IEVWNKID
Sbjct: 293 AAFRATLEEVLEADVILHVRDISHDDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDR 352
Query: 424 HDEE 427
+ E
Sbjct: 353 YGPE 356
>gi|374331616|ref|YP_005081800.1| GTP-binding protein HSR1 [Pseudovibrio sp. FO-BEG1]
gi|359344404|gb|AEV37778.1| GTP-binding protein HSR1 [Pseudovibrio sp. FO-BEG1]
Length = 491
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 203/352 (57%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
QA+L EA+ LA ++E + +V + ++ + + FG G VE
Sbjct: 63 QARLEEAVGLAAAIELE------------------IVSSGLVRLANVKPGSLFGSGKVEE 104
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I+ I E ++ + V+ L+ IQQRNLER W V+DR GLI+EIF A TKE +
Sbjct: 105 IRGQIEIEE----IELVVVDHPLTPIQQRNLERDWNTKVIDRTGLILEIFGERAQTKEGR 160
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L ++KSRLVR T E R GG GF+ G GET+++
Sbjct: 161 LQVELAHLTWQKSRLVR------SWTHLE-----------RQRGGLGFVGGPGETQIEAD 203
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR I +R + L Q+E+V+RTR + R R++ H +A VGYTNAGKSTL +
Sbjct: 204 RRIIQDRITLLKGQLEQVQRTRKLHRKQRKKVPH--------PVIAFVGYTNAGKSTLFN 255
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++++++F+ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEV+
Sbjct: 256 RMTNAEVFAKDLLFATLDPTLRRLKLPHGREVILSDTVGFISELPHNLVAAFRATLEEVI 315
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
+AD+++HV D + + V + L+ +G+ + +IEV+NKID DE
Sbjct: 316 QADIVLHVRDIAHEDTKAQSLDVNETLEMLGLKVSESDRVIEVYNKIDKLDE 367
>gi|89068178|ref|ZP_01155588.1| GTP-binding protein HflX [Oceanicola granulosus HTCC2516]
gi|89046095|gb|EAR52153.1| GTP-binding protein HflX [Oceanicola granulosus HTCC2516]
Length = 430
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 182/295 (61%), Gaps = 30/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
FG G + +K + E+ + + V+ +S +QQRNLE+ WG +LDR GLI+EIF+
Sbjct: 68 LFGTGKIAELKQRLKAEEA----ELVLVDGPVSPVQQRNLEKEWGVKLLDRTGLILEIFS 123
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E LQ E+AAL Y+++RLVR T E R GG GF+ G
Sbjct: 124 DRARTREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQRGGLGFVGG 166
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+++ RR I E+ + L Q+E+V +TR + RA+R + VA+VGYTNA
Sbjct: 167 PGETQIEADRRAIDEQLARLRKQLEKVVKTRTLHRASRAKV------PFPIVALVGYTNA 220
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ +++ + LFATLDP ++ V LPSG+ V+LSDTVGFISDLP +LV AF
Sbjct: 221 GKSTLFNRLTGAEVMAKDMLFATLDPTMRKVELPSGQEVILSDTVGFISDLPTELVAAFR 280
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEEV++ADL++HV D EE V +L +GV E+ ++EVWNKID
Sbjct: 281 ATLEEVLDADLILHVRDVAHAETEEQAEDVRTILSGIGVGED--APLLEVWNKID 333
>gi|149204767|ref|ZP_01881730.1| GTP-binding protein HflX [Roseovarius sp. TM1035]
gi|149141736|gb|EDM29789.1| GTP-binding protein HflX [Roseovarius sp. TM1035]
Length = 424
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/317 (43%), Positives = 191/317 (60%), Gaps = 31/317 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV +++ K A FG G +E ++ A E++ + V+ ++ +QQRN
Sbjct: 40 LPDIDVVGADTVRLRKPDAGRLFGKGKLE----ELHQAMEAAEVELVLVDGPVTPVQQRN 95
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 96 LEKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHLE- 148
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I ++ L Q+E+V +TR + RAAR
Sbjct: 149 ----------RQRGGLGFVGGPGETQIEADRRAIDDQLVRLRRQLEKVAKTRTLHRAARA 198
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG--K 345
+ VA+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ V LP G +
Sbjct: 199 KV------PFPVVALVGYTNAGKSTLFNRLTGADVMAKDMLFATLDPTMRRVNLPEGGPE 252
Query: 346 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 405
V+LSDTVGFISDLP +LV AF ATLEEV+ ADL+ HV D + P V +L+ +G
Sbjct: 253 VILSDTVGFISDLPTELVAAFRATLEEVLSADLICHVRDISHPETVSQSRDVATILESLG 312
Query: 406 VSEEKLKNMIEVWNKID 422
VS++ + IE+WNKID
Sbjct: 313 VSDKTPQ--IEIWNKID 327
>gi|209542663|ref|YP_002274892.1| GTP-binding proten HflX [Gluconacetobacter diazotrophicus PAl 5]
gi|209530340|gb|ACI50277.1| GTP-binding proten HflX [Gluconacetobacter diazotrophicus PAl 5]
Length = 436
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/351 (41%), Positives = 201/351 (57%), Gaps = 50/351 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA S+ V+V+ L R T G G VE+
Sbjct: 35 EARLEEAVGLAASIG------------------LVIVRQAVLVLRARRPSTLLGNGQVES 76
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
++ + + + + V++ LS +QQRNLERA G V+DR LI++IF A TKE
Sbjct: 77 LRAAVQ----QDRVAVVIVDSRLSPVQQRNLERALGCKVIDRTALILDIFGERAATKEGT 132
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 133 LQVELAHLEYQRSRLVRT------WTHLE-----------RQRGGFGFLGGPGETQIEAD 175
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I +R L ++E+VRRTR + RAARRR VA+VGYTNAGKSTL +AL
Sbjct: 176 RRMIGDRIVRLKRELEQVRRTRGLHRAARRRV------PFPVVALVGYTNAGKSTLFNAL 229
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ + +F+ +LFATLDP ++ + LPSG +++LSDTVGFISDLP +L+ AF ATLEEV EA
Sbjct: 230 TGATVFAQDQLFATLDPTMRGIRLPSGRRIILSDTVGFISDLPTELIAAFRATLEEVAEA 289
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS----EEKLKNMIEVWNKIDY 423
D+++HV D + P+ R V VL+ + S ++ + +IEV NK D
Sbjct: 290 DVILHVRDISHPDSAAQRADVEDVLEGMAGSGTLEDDWRRRVIEVQNKADL 340
>gi|115524769|ref|YP_781680.1| HSR1-like GTP-binding protein [Rhodopseudomonas palustris BisA53]
gi|115518716|gb|ABJ06700.1| GTP-binding protein, HSR1-related protein [Rhodopseudomonas
palustris BisA53]
Length = 455
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/304 (45%), Positives = 187/304 (61%), Gaps = 28/304 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE + I E+ + ++ LS IQQRNLE+AWG VLDR GLI+
Sbjct: 76 RPATYLGKGKVEDVLAAIKA----HEVGLVVMDCALSPIQQRNLEKAWGTKVLDRTGLIL 131
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L Y++SRLVR T E R GG G
Sbjct: 132 EIFGRRAKTREGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 174
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R + + S++++V+ TR + RA R+R VA+VG
Sbjct: 175 FLGGPGETQIEADRRLIGDRITKIESELKKVQSTRRLHRAGRQRVP------YRVVALVG 228
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +++ + LFATLDP L+++VLP GK +LSDTVGFIS+LP QLV
Sbjct: 229 YTNAGKSTLFNRLTRAEVQAADMLFATLDPTLRALVLPHGGKAMLSDTVGFISNLPTQLV 288
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EADL++HV D + + + + V VL+Q+G++ +IEVWNKID
Sbjct: 289 AAFRATLEEVLEADLILHVRDISHEDADAQQDDVDAVLRQLGIAPGTGSPIIEVWNKIDR 348
Query: 424 HDEE 427
E
Sbjct: 349 FSPE 352
>gi|163746239|ref|ZP_02153597.1| GTP-binding protein HflX, putative [Oceanibulbus indolifex HEL-45]
gi|161380124|gb|EDQ04535.1| GTP-binding protein HflX, putative [Oceanibulbus indolifex HEL-45]
Length = 432
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 185/302 (61%), Gaps = 30/302 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A FG G +E ++ + AE ++ + V+ ++ +QQRNLE+AWG +LDR GLI+E
Sbjct: 67 AGMLFGKGKIEELEQRMKAAE----VELVLVDGPVTPVQQRNLEKAWGVKLLDRTGLILE 122
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF+ A T+E LQ E+AAL Y+++RLVR T E R GG GF
Sbjct: 123 IFSDRAATREGVLQVEMAALNYQRTRLVRA------WTHLE-----------RQRGGLGF 165
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+++ RR I ++ L Q+E+V +TRA+ RAAR + VA+VGY
Sbjct: 166 VGGPGETQIEADRRAIDDQLVRLRRQLEKVVKTRALHRAARAKV------PFPIVALVGY 219
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ +++ + LFATLDP ++S+VLP G +++LSDTVGFISDLP +LV
Sbjct: 220 TNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRSLVLPDGPEIILSDTVGFISDLPTELVA 279
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+F ATLEEV+ AD++ HV D + EE V +L +GV +E EVWNK+D
Sbjct: 280 SFRATLEEVLAADIICHVRDVSHAETEEQAQNVRDILASLGVPKE--TRSFEVWNKLDLL 337
Query: 425 DE 426
E
Sbjct: 338 PE 339
>gi|27379603|ref|NP_771132.1| GTP-binding protein HflX [Bradyrhizobium japonicum USDA 110]
gi|27352755|dbj|BAC49757.1| GTP-binding protein HFLX [Bradyrhizobium japonicum USDA 110]
Length = 437
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/305 (45%), Positives = 189/305 (61%), Gaps = 30/305 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKG-ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
R T+ G G VE I A +K +++ + ++ L+ IQQRNLE+ VLDR GLI
Sbjct: 57 RPATYIGKGKVEEI-----AALAKSLDVELVVMDCALAPIQQRNLEKELHAKVLDRTGLI 111
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
+EIF A TKE LQ ELA L Y++SRLVR T E R GG
Sbjct: 112 LEIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGF 154
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
GF+ G GET+++ RR I ER S L ++++V+ TR + RA R+R VA+V
Sbjct: 155 GFMGGPGETQIEADRRLIQERISKLEGELKKVQATRRLHRAGRQRVP------YRVVALV 208
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQL 362
GYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP QL
Sbjct: 209 GYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQL 268
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+ AF ATLEEV+EAD+++HV D + + E ++ V VL+Q+G++ + +IEVWNKID
Sbjct: 269 IAAFRATLEEVLEADVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKID 328
Query: 423 YHDEE 427
+D E
Sbjct: 329 RYDAE 333
>gi|340776466|ref|ZP_08696409.1| GTP-binding protein hflX [Acetobacter aceti NBRC 14818]
Length = 439
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 142/336 (42%), Positives = 200/336 (59%), Gaps = 40/336 (11%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G VE+++ A ++ E+ + ++A LS QQRNLE+A G V+DR GLI+
Sbjct: 63 RPATLLGTGQVESLR----EAVAEKEIKVVVIDAKLSPGQQRNLEKALGCKVIDRTGLIL 118
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
+IF A A T+E LQ ELA L Y++SRLVR+ T E R GG G
Sbjct: 119 DIFGARAATREGSLQVELAHLEYQRSRLVRL------WTHLE-----------RQRGGFG 161
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R L ++E+VRRTR + R+AR+R VA+VG
Sbjct: 162 FLGGPGETQIEADRRIIGDRIVRLKRELEQVRRTRGLHRSARKR------VPFPVVALVG 215
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLV 363
YTNAGKSTL +AL+ + +++ +LFATLDP ++++ LPSG+ V+LSDTVGFISDLP +L+
Sbjct: 216 YTNAGKSTLFNALTGASVYAQDQLFATLDPTMRAIRLPSGRQVILSDTVGFISDLPTELI 275
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV---GVSEEKLKN-MIEVWN 419
AF ATLEEV EAD+++HV D P+ R+ VL VL + G+ + + ++ +IEV N
Sbjct: 276 AAFRATLEEVAEADIILHVRDIAHPDTAAQRSDVLSVLSGMERDGMLDHEWRSRVIEVLN 335
Query: 420 KIDY--------HDEEMGDVEYIDGDDISNFSRAED 447
K D H + I GD + A D
Sbjct: 336 KADLLGGPEQVEHHGTAVPISAITGDGLPELMAAID 371
>gi|418296235|ref|ZP_12908079.1| GTP-binding protein HFLX [Agrobacterium tumefaciens CCNWGS0286]
gi|355539667|gb|EHH08905.1| GTP-binding protein HFLX [Agrobacterium tumefaciens CCNWGS0286]
Length = 444
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 154/382 (40%), Positives = 207/382 (54%), Gaps = 63/382 (16%)
Query: 55 NRDPDDPPRLFLVQPRLKPPTFLQAKLNEA--LCLANSLEEQRDGYFDTDFFDKELPPHV 112
NRD P + P ++AKL EA L LA LE
Sbjct: 16 NRDAAAGP--------VAPGRSVEAKLEEAKGLALAIDLE-------------------- 47
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V Q + + R T FG G +E I ++ +S + V+ L+ +QQRNLE+ W
Sbjct: 48 VTQGLIVSVNQPRPATLFGTGKIEEIGHLLDETDS----GLVIVDHPLTPVQQRNLEKQW 103
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 104 NAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE------ 151
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + +R L ++E+V RTR + RA RR+ H
Sbjct: 152 -----RQRGGAGFMGGPGETQIEADRRLLQDRIVKLEKELEQVVRTRQLHRAKRRKVPH- 205
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLS 349
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LS
Sbjct: 206 -------PIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILS 258
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 408
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ VL++L +G+ E
Sbjct: 259 DTVGFISDLPTHLVAAFRATLEEVLEADLVLHVRDMSDPDNAAQSADVLRILGDLGIDEK 318
Query: 409 EKLKNMIEVWNKIDYHDEEMGD 430
E K +IEVWNK+D + E D
Sbjct: 319 EAEKRIIEVWNKVDRLEPEAHD 340
>gi|162148045|ref|YP_001602506.1| GTP-binding protein hflX [Gluconacetobacter diazotrophicus PAl 5]
gi|161786622|emb|CAP56204.1| GTP-binding protein hflX [Gluconacetobacter diazotrophicus PAl 5]
Length = 428
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/351 (41%), Positives = 201/351 (57%), Gaps = 50/351 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA S+ V+V+ L R T G G VE+
Sbjct: 27 EARLEEAVGLAASI------------------GLVIVRQAVLVLRARRPSTLLGNGQVES 68
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
++ + + + + V++ LS +QQRNLERA G V+DR LI++IF A TKE
Sbjct: 69 LRAAVQ----QDRVAVVIVDSRLSPVQQRNLERALGCKVIDRTALILDIFGERAATKEGT 124
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 125 LQVELAHLEYQRSRLVRT------WTHLE-----------RQRGGFGFLGGPGETQIEAD 167
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I +R L ++E+VRRTR + RAARRR VA+VGYTNAGKSTL +AL
Sbjct: 168 RRMIGDRIVRLKRELEQVRRTRGLHRAARRRV------PFPVVALVGYTNAGKSTLFNAL 221
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ + +F+ +LFATLDP ++ + LPSG +++LSDTVGFISDLP +L+ AF ATLEEV EA
Sbjct: 222 TGATVFAQDQLFATLDPTMRGIRLPSGRRIILSDTVGFISDLPTELIAAFRATLEEVAEA 281
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS----EEKLKNMIEVWNKIDY 423
D+++HV D + P+ R V VL+ + S ++ + +IEV NK D
Sbjct: 282 DVILHVRDISHPDSAAQRADVEDVLEGMAGSGTLEDDWRRRVIEVQNKADL 332
>gi|409437317|ref|ZP_11264436.1| putative GTPase [Rhizobium mesoamericanum STM3625]
gi|408751041|emb|CCM75592.1| putative GTPase [Rhizobium mesoamericanum STM3625]
Length = 444
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 156/404 (38%), Positives = 222/404 (54%), Gaps = 58/404 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + + V V +P R T G G +E
Sbjct: 31 ESRLEEATGLAQAI--------DLDVVNGAI---VTVNDP-------RPATLMGTGKIEE 72
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 73 IKATLDANDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 128
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 129 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 171
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA R++ H VA+VGYTNAGKSTL +
Sbjct: 172 RRLLQDRIVKLERELEQVVRTRQLHRAKRKKVPH--------PIVALVGYTNAGKSTLFN 223
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 224 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 283
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL-KNMIEVWNKIDYHDEEMGDVEY 433
EADL++HV D + + + VL++L+ +G+ EE+ K +IEVWNKID + E D
Sbjct: 284 EADLILHVRDMSDVDNQAQSADVLRILKDLGIDEEEGDKRIIEVWNKIDRLEPEAHDA-- 341
Query: 434 IDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE 477
+ S AE+ S + E ID G+ + G ++E
Sbjct: 342 ----IVQKASGAENVVALS-AISGEGIDTLMGEISRRLSGVLTE 380
>gi|418406935|ref|ZP_12980254.1| GTP-binding protein HFLX [Agrobacterium tumefaciens 5A]
gi|358007428|gb|EHJ99751.1| GTP-binding protein HFLX [Agrobacterium tumefaciens 5A]
Length = 444
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 151/366 (41%), Positives = 203/366 (55%), Gaps = 55/366 (15%)
Query: 71 LKPPTFLQAKLNEA--LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADT 128
+ P ++AKL EA L LA LE V Q + + R T
Sbjct: 24 VSPVRSVEAKLEEAKGLALAIDLE--------------------VTQGLVVPVNQPRPAT 63
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
FG G +E I H+ + G + V+ L+ +QQRNLE+ W V+DR GLI+EIF
Sbjct: 64 LFGTGKIEEI-GHLLDETNSG---LVIVDHPLTPVQQRNLEKQWNAKVIDRTGLILEIFG 119
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A TKE LQ +LA L Y+K RLVR T E R GG GF+ G
Sbjct: 120 RRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGAGFMGG 162
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYT 306
GET+++ RR + +R L ++E+V RTR + RA RR+ H VA+VGYT
Sbjct: 163 PGETQIEADRRLLQDRIVKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYT 214
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDA 365
NAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV A
Sbjct: 215 NAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAA 274
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYH 424
F ATLEEV+EADL++HV D + P+ VL++L +G+ E E K +IEVWNK+D
Sbjct: 275 FRATLEEVLEADLILHVRDMSDPDNAAQSADVLRILGDLGIDEKEAEKRIIEVWNKVDRL 334
Query: 425 DEEMGD 430
+ E D
Sbjct: 335 EPEAHD 340
>gi|374575494|ref|ZP_09648590.1| GTP-binding protein HflX [Bradyrhizobium sp. WSM471]
gi|374423815|gb|EHR03348.1| GTP-binding protein HflX [Bradyrhizobium sp. WSM471]
Length = 460
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 185/304 (60%), Gaps = 28/304 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE I E ++ + ++ L+ IQQRNLE+ VLDR GLI+
Sbjct: 80 RPATYIGKGKVEEIAALAKSLE----VELVVMDCALAPIQQRNLEKELQAKVLDRTGLIL 135
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y++SRLVR T E R GG G
Sbjct: 136 EIFGRRAKTKEGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 178
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I ER S L ++++V+ TR + RA R+R VA+VG
Sbjct: 179 FMGGPGETQIEADRRLIQERISKLEGELKKVQATRRLHRAGRQRVP------YRVVALVG 232
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP QLV
Sbjct: 233 YTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQLV 292
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EAD+++HV D + + E ++ V VL+Q+G++ + +IEVWNKID
Sbjct: 293 AAFRATLEEVLEADVILHVRDISHDDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKIDR 352
Query: 424 HDEE 427
+ E
Sbjct: 353 YGPE 356
>gi|254459937|ref|ZP_05073353.1| GTP-binding proten HflX [Rhodobacterales bacterium HTCC2083]
gi|206676526|gb|EDZ41013.1| GTP-binding proten HflX [Rhodobacteraceae bacterium HTCC2083]
Length = 423
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 47/357 (13%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
++V+ P KA + FG G +E + + E +D + ++ ++ +QQRNLE+A
Sbjct: 49 IIVRLP-----KAHSGMLFGKGKIEELHQLFDAEE----VDLVLIDGPVTPVQQRNLEKA 99
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
WG +LDR GLI+EIF+ A T E LQ E+AAL Y+++RLVR T E
Sbjct: 100 WGVKLLDRTGLILEIFSDRARTSEGVLQVEMAALSYQRTRLVRA------WTHLE----- 148
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I ++ L ++ +V +TRA+ R AR +
Sbjct: 149 ------RQRGGLGFVGGPGETQIESDRRAIDDQLVRLRRKLSKVVKTRALHREARAK--- 199
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSD 350
VA+VGYTNAGKSTL + L+ +++F+ LFATLDP +++V LP G +V+LSD
Sbjct: 200 ---VPFPIVALVGYTNAGKSTLFNRLTGAEVFAKDMLFATLDPTMRAVELPDGPQVILSD 256
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFISDLP +LV +F ATLEEV+ ADL+VHV D + EE T V +L +GV E
Sbjct: 257 TVGFISDLPTELVASFRATLEEVLAADLIVHVRDISHEGTEEQATDVRAILTSLGVGEG- 315
Query: 411 LKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDD 467
IEVWNKID +E D D + +RA D + + V I YG D
Sbjct: 316 -AKQIEVWNKIDL-------LEPDDKDAV--LARAARHD---DVIAVSSISGYGMQD 359
>gi|119386828|ref|YP_917883.1| small GTP-binding protein [Paracoccus denitrificans PD1222]
gi|119377423|gb|ABL72187.1| GTP-binding protein HflX [Paracoccus denitrificans PD1222]
Length = 435
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 146/378 (38%), Positives = 206/378 (54%), Gaps = 51/378 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G E I H+ A + + + ++ ++ +QQRNLE+ WG +LDR GLI+EIF
Sbjct: 65 LFSKGKREEIGQHLEAAAAGEGAELVLIDGPVTPVQQRNLEKEWGVKILDRTGLILEIFA 124
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E LQ ELAAL Y+++RLVR T E R GG GF+ G
Sbjct: 125 DRAQTREGVLQVELAALAYQRTRLVRA------WTHLE-----------RQRGGLGFVGG 167
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+++ RR I E+ L Q+E V +TR + R AR + VA+VGYTNA
Sbjct: 168 PGETQIEADRRAIDEQVVRLRRQLERVVKTRELHRKARAKV------PYPIVALVGYTNA 221
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ +++ + +LFATLDP ++ + LP G +V+LSDTVGFISDLP +LV AF
Sbjct: 222 GKSTLFNRLTGAEVLAQDQLFATLDPTMRQLTLPGGRRVILSDTVGFISDLPHELVAAFR 281
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
ATLEEV+ ADL++HV D + P EE V ++L +GV E+ +IEVWNKID
Sbjct: 282 ATLEEVLAADLILHVRDISHPETEEQAGDVGEILDSLGVEED--VPLIEVWNKIDA---- 335
Query: 428 MGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMNKNH 487
+S +RA + T + V+ I G+ D + L E +++
Sbjct: 336 -----------LSPETRAALQRTDARTQGVQAISALSGEGLDTLLAAIEARLAEVLDEPR 384
Query: 488 ND------YSDG----WL 495
+ +SDG WL
Sbjct: 385 REAELVLPHSDGRRRAWL 402
>gi|159184763|ref|NP_354458.2| GTP-binding protein HFLX [Agrobacterium fabrum str. C58]
gi|159140051|gb|AAK87243.2| GTP-binding protein HFLX [Agrobacterium fabrum str. C58]
Length = 444
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 151/364 (41%), Positives = 202/364 (55%), Gaps = 55/364 (15%)
Query: 73 PPTFLQAKLNEA--LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFF 130
P ++AKL EA L LA LE V Q + + R T F
Sbjct: 26 PGRSVEAKLEEAKGLALAIDLE--------------------VTQGLVVPVNQPRPATLF 65
Query: 131 GPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAH 190
G G +E I H+ + G + V+ L+ +QQRNLE+ W V+DR GLI+EIF
Sbjct: 66 GTGKIEEI-GHLLDETNSG---LVIVDHPLTPVQQRNLEKQWNAKVIDRTGLILEIFGRR 121
Query: 191 AHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAG 250
A TKE LQ +LA L Y+K RLVR T E R GG GF+ G G
Sbjct: 122 ASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGAGFMGGPG 164
Query: 251 ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNA 308
ET+++ RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNA
Sbjct: 165 ETQIEADRRLLQDRIVKLEKELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNA 216
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF
Sbjct: 217 GKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFR 276
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDE 426
ATLEEV+EADL++HV D + P+ VL++L +G+ E E K +IEVWNK+D +
Sbjct: 277 ATLEEVLEADLVLHVRDMSDPDNAAQSADVLRILGDLGIDEKEAEKRIIEVWNKVDRLEP 336
Query: 427 EMGD 430
E D
Sbjct: 337 EAHD 340
>gi|418938791|ref|ZP_13492254.1| GTP-binding proten HflX [Rhizobium sp. PDO1-076]
gi|375054528|gb|EHS50873.1| GTP-binding proten HflX [Rhizobium sp. PDO1-076]
Length = 444
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 219/413 (53%), Gaps = 63/413 (15%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRV 180
+ R T G G +E + ++ E DA + V+ L+ +QQRNLE+ W V+DR
Sbjct: 58 QPRPATLLGSGKIEEVTAMLD------ERDAGLVIVDHPLTPVQQRNLEKEWNAKVIDRT 111
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLI+EIF A TKE LQ ELA L Y+K RLVR T E R
Sbjct: 112 GLILEIFGRRASTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQR 154
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG GF+ G GET+++ RR + +R L ++E+V RTR + RA RR+ V
Sbjct: 155 GGAGFMGGPGETQIEADRRMLQDRIVKLEKELEQVVRTRQLHRAKRRKVPHP------IV 208
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
A+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP
Sbjct: 209 ALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISNLP 268
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVW 418
LV AF ATLEEV+EADL++HV D P+ VL++L +G+ E E+ + +IE+W
Sbjct: 269 THLVAAFRATLEEVLEADLILHVRDMADPDNGAQSADVLRILDDLGIDEKERSERIIEIW 328
Query: 419 NKIDYHDEEMGD--------------VEYIDGDDI--------SNFSRAEDKDTTSEPVD 456
NKID D E D V I G+ + S + T + P D
Sbjct: 329 NKIDRLDPETHDAIMQKAKGRENVMSVSAITGEGVDRLLDVISQRLSGVLTEATITIPAD 388
Query: 457 VECIDNYGGDDA------DNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDN 503
+ ++ ++A D+ DG VS D+ + + D + L SG + D
Sbjct: 389 KHALISWAYENAVVTGREDHEDGSVSLDV--RLTERQADEMERKLGSGQKPDK 439
>gi|399992676|ref|YP_006572916.1| GTP-binding protein HflX [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398657231|gb|AFO91197.1| GTP-binding protein HflX [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 423
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 194/324 (59%), Gaps = 30/324 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP V+ + ++ KA A FG G ++ +K + E ++ + ++ +S +QQRN
Sbjct: 40 LPDIEVIGSAVVRLPKAHAGMLFGSGKIDELKAQFHDEE----VELVLIDGPVSPVQQRN 95
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 96 LEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE- 148
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAAR
Sbjct: 149 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLDKVVKTRTLHRAARA 198
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KV 346
+ VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP G ++
Sbjct: 199 KI------PYPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVQLPDGPEI 252
Query: 347 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 406
+LSDTVGFISDLP +LV AF ATLEEV+ AD++VHV D + + V +L +GV
Sbjct: 253 ILSDTVGFISDLPTELVAAFRATLEEVLAADVVVHVRDISHDETQNQAADVESILASLGV 312
Query: 407 SEEKLKNMIEVWNKIDYHDEEMGD 430
+ + + +EVWNK+D D+E +
Sbjct: 313 DDSRAR--LEVWNKLDLLDDEQAE 334
>gi|417860127|ref|ZP_12505183.1| GTP-binding protein HFLX [Agrobacterium tumefaciens F2]
gi|338823191|gb|EGP57159.1| GTP-binding protein HFLX [Agrobacterium tumefaciens F2]
Length = 474
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/320 (43%), Positives = 188/320 (58%), Gaps = 29/320 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V Q + + R T FG G +E I ++ +S + V+ L+ +QQRNLE+ W
Sbjct: 78 VTQGLIVPVNQPRPATLFGTGKIEEIGHLLDETDS----GLVIVDHPLTPVQQRNLEKQW 133
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 134 NCKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE------ 181
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + +R L ++E+V RTR + RA RR+
Sbjct: 182 -----RQRGGAGFMGGPGETQIEADRRLLQDRIVKLEKELEQVVRTRQLHRAKRRKVPHP 236
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LSDT
Sbjct: 237 ------IVALVGYTNAGKSTLFNHITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDT 290
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EK 410
VGFISDLP LV AF ATLEEV+EADL++HV D + P+ VL++L +G+ E E
Sbjct: 291 VGFISDLPTHLVAAFRATLEEVLEADLVLHVRDMSDPDNAAQSADVLRILGDLGIDEKEA 350
Query: 411 LKNMIEVWNKIDYHDEEMGD 430
K +IEVWNK+D + E D
Sbjct: 351 EKRIIEVWNKVDRLEPEAHD 370
>gi|414162676|ref|ZP_11418923.1| GTP-binding protein HflX [Afipia felis ATCC 53690]
gi|410880456|gb|EKS28296.1| GTP-binding protein HflX [Afipia felis ATCC 53690]
Length = 463
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 144/351 (41%), Positives = 200/351 (56%), Gaps = 46/351 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L+EA LA +++ VVV+ + R T+ G G VE
Sbjct: 53 EARLDEAAGLARAID------------------LVVVEALIAPLSEIRPATYLGTGKVE- 93
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I G E++ + ++ LS IQQRNLE+ W VLDR GLI+EIF A T+E
Sbjct: 94 ---EILGLIKSHEVELVVMDCALSPIQQRNLEKEWNVKVLDRTGLILEIFGRRAKTREGT 150
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L+Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 151 LQVELAHLIYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEAD 193
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + + + +++V+ TR + RA R+R VA+VGYTNAGKSTL + L
Sbjct: 194 RRMIGERITRIENDLKKVQATRRLHRAGRQRVP------YRVVALVGYTNAGKSTLFNRL 247
Query: 318 SDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ +++ + LFATLDP L+++ LP GK ++SDTVGFISDLP LV AF ATLEEV+EA
Sbjct: 248 TRAEVQAADMLFATLDPTLRALKLPHGGKAMISDTVGFISDLPTMLVAAFRATLEEVIEA 307
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
D+++HV D + + E V QVL+Q+ + + +IEVWNKID E
Sbjct: 308 DVILHVRDISHEDAEAQERDVDQVLRQLSIDTDAGHRLIEVWNKIDRFSPE 358
>gi|296535545|ref|ZP_06897727.1| GTP-binding protein HflX [Roseomonas cervicalis ATCC 49957]
gi|296264131|gb|EFH10574.1| GTP-binding protein HflX [Roseomonas cervicalis ATCC 49957]
Length = 393
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 186/321 (57%), Gaps = 38/321 (11%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G VE I + ++ + V+A L+ +QQRNLER W V+DR GLI+
Sbjct: 23 RPSTLLGEGQVEMAAEAIE----ENQIGVVVVDAALTPVQQRNLERQWHCKVIDRTGLIL 78
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y+++RLVR T E R GG G
Sbjct: 79 EIFGERARTKEGTLQVELAHLEYQRTRLVR------SWTHLE-----------RQRGGFG 121
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GE+++++ RR I ER L ++E+VRRTR + RAAR R VA+VG
Sbjct: 122 FLGGPGESQIEIDRRLIGERIVKLKRELEQVRRTRGLHRAARTRV------PFPVVALVG 175
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLV 363
YTNAGKSTL +AL+ + +++ +LFATLDP ++++ LPSG+ V+LSDTVGFISDLP QL+
Sbjct: 176 YTNAGKSTLFNALTGAGVYAQDQLFATLDPTMRAIRLPSGRTVILSDTVGFISDLPTQLI 235
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL------KNMIEV 417
+AF ATLEEV AD+++HV D P+ R V+ VL ++ E IEV
Sbjct: 236 EAFRATLEEVAAADIILHVRDVAHPDTTAQRNDVVGVLSEMAKGEHPTLDENWPARTIEV 295
Query: 418 WNKIDYHDEEMGDVEYIDGDD 438
NK D +G + + G D
Sbjct: 296 LNKADL----LGGIAEVPGLD 312
>gi|319783406|ref|YP_004142882.1| GTP-binding proten HflX [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169294|gb|ADV12832.1| GTP-binding proten HflX [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 463
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 142/333 (42%), Positives = 184/333 (55%), Gaps = 28/333 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G V + +G + + V+ L+ +QQRNLE+ VLDR GLI+
Sbjct: 85 RPATLLGSGKVAEFAEIVK----EGHAEVVVVDHPLTPVQQRNLEKELNAKVLDRTGLIL 140
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y+K RLVR T E R GG G
Sbjct: 141 EIFGERARTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGAG 183
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR++ E+ L ++E VRRTR + RA RR+ VA+VG
Sbjct: 184 FLGGPGETQIESDRRQLQEKIIKLKQELETVRRTRDLHRAKRRKVP------FPVVAIVG 237
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +D+ + LFATLDP L+ V LP G ++LSDTVGFISDLP L+
Sbjct: 238 YTNAGKSTLFNRLTGADVLAQDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDLPTHLI 297
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEVVEADL++H+ D + P+ V ++L +GV K +IEVWNKID
Sbjct: 298 AAFRATLEEVVEADLVLHLRDISDPDTAAQAEDVERILADLGVDAGDAKRVIEVWNKIDR 357
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
DE DG D + T E +D
Sbjct: 358 LDEGNRTRLLADGADANKAPPIAVSAVTGEGID 390
>gi|400754356|ref|YP_006562724.1| GTP-binding protein HflX [Phaeobacter gallaeciensis 2.10]
gi|398653509|gb|AFO87479.1| GTP-binding protein HflX [Phaeobacter gallaeciensis 2.10]
Length = 423
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 194/324 (59%), Gaps = 30/324 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP V+ + ++ KA A FG G ++ +K + E ++ + ++ +S +QQRN
Sbjct: 40 LPDIEVIGSAVVRLPKAHAGMLFGSGKIDELKARFHDEE----VELVLIDGPVSPVQQRN 95
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 96 LEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE- 148
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAAR
Sbjct: 149 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLDKVVKTRTLHRAARA 198
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KV 346
+ VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP G ++
Sbjct: 199 KI------PYPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVQLPDGPEI 252
Query: 347 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 406
+LSDTVGFISDLP +LV AF ATLEEV+ AD++VHV D + + V +L +GV
Sbjct: 253 ILSDTVGFISDLPTELVAAFRATLEEVLAADVVVHVRDISHDETQNQAADVESILASLGV 312
Query: 407 SEEKLKNMIEVWNKIDYHDEEMGD 430
+ + + +EVWNK+D D+E +
Sbjct: 313 DDSRAR--LEVWNKLDLLDDEQAE 334
>gi|49474155|ref|YP_032197.1| GTP-binding protein HflX [Bartonella quintana str. Toulouse]
gi|49239659|emb|CAF26030.1| GTP-binding protein hflX [Bartonella quintana str. Toulouse]
Length = 447
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 147/380 (38%), Positives = 205/380 (53%), Gaps = 46/380 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G V+ + +I+G ++ ++ L+ +QQRNLE+ W V+DR LI+EIF
Sbjct: 75 TLLRKGKVDVLAHYISGYN----IELAIIDHFLTPVQQRNLEKLWNCKVIDRTALILEIF 130
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKE LQ ELA L Y+KSRLVR T E R GG GF+
Sbjct: 131 GDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE-----------RQRGGCGFLG 173
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR + E+ + ++E V +TRA+ RA R++ VA+VGYTN
Sbjct: 174 GPGETQIEADRRLLQEKIIRIRRELETVIKTRALHRAKRKKTSHP------VVALVGYTN 227
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
GKSTL + LS +D LFATLDP ++ V+LP GK +LLSDTVGFIS+LP L+ AF
Sbjct: 228 TGKSTLFNRLSGADALEKDMLFATLDPIVRKVILPHGKTILLSDTVGFISNLPTNLIAAF 287
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEEVVEADL++HV D + + H VL+VL +G+ + +++IEVWNKID DE
Sbjct: 288 RATLEEVVEADLILHVRDMSDLDHRAHAQDVLEVLSGLGIDTDDTEHIIEVWNKIDILDE 347
Query: 427 EMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNN 471
+ V + D + A +K E +EC+ +
Sbjct: 348 YALNVLQTSVKTRLNPAVMVSALKSDGLDQLLAAIEKRIFGEMQSIECL--LRPHEMSLI 405
Query: 472 DGFVSEDLGESMNKNHNDYS 491
D F E+ GE + + H+D S
Sbjct: 406 DWF-YENSGEIIQEGHDDGS 424
>gi|197105188|ref|YP_002130565.1| GTP-binding protein HflX [Phenylobacterium zucineum HLK1]
gi|196478608|gb|ACG78136.1| GTP-binding protein HflX [Phenylobacterium zucineum HLK1]
Length = 424
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 199/346 (57%), Gaps = 47/346 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
QA+L EA+ LA +L D E+ +V L T FG G VE
Sbjct: 17 QARLEEAVGLAQAL-------------DLEVRETLVAPLRRLTPA-----TLFGKGKVE- 57
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ E D + V+ L+ +QQRNLE+AW V+DR GLI+EIF A T+E +
Sbjct: 58 ---EVAAVVDSVEADVVVVDDALTPVQQRNLEKAWKAKVIDRTGLILEIFARRARTREGR 114
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GG G + G GET+++
Sbjct: 115 LQVELARLTYERSRLVRT------WTHLE-----------RQRGGFGVMGGPGETQIETD 157
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR + E+ L ++ EVRRTR +QR+ARRR TVA+VGYTNAGKSTL + L
Sbjct: 158 RRLLAEKIGKLKRELVEVRRTRTLQRSARRRV------PYPTVALVGYTNAGKSTLFNRL 211
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ +++ + LFATLDP L+ + LP G+ +LSDTVGFISDLP +LV+AF ATLEEV EA
Sbjct: 212 TQAEVLAQDMLFATLDPTLRMLKLPDGRPAILSDTVGFISDLPHELVEAFRATLEEVREA 271
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
D+++HV D + E V VLQ++GV ++ + ++EVWNK+D
Sbjct: 272 DVVLHVRDIASEETEAQAQDVRTVLQRLGVDMDE-RRILEVWNKVD 316
>gi|378825779|ref|YP_005188511.1| tRNA modification GTPase mnmE [Sinorhizobium fredii HH103]
gi|365178831|emb|CCE95686.1| tRNA modification GTPase mnmE [Sinorhizobium fredii HH103]
Length = 440
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 191/320 (59%), Gaps = 33/320 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I HI + G + V+ L+ +QQRNLE+ W
Sbjct: 46 VVHGTIVSVAQPKPGTLLGSGKIEEI-GHILNEKDAG---LVIVDHPLTPVQQRNLEKEW 101
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 102 NAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE------ 149
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + ER L ++E+VRRTR + R+ R++ H
Sbjct: 150 -----RQRGGAGFMGGPGETQIEADRRLLQERIVRLERELEQVRRTRQLHRSKRKKVPH- 203
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLS 349
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LS
Sbjct: 204 -------PIVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILS 256
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 408
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E
Sbjct: 257 DTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDLSDPDNQAQASDVLRILTDLGIDEK 316
Query: 409 EKLKNMIEVWNKIDYHDEEM 428
E + ++EVWNKID + E+
Sbjct: 317 EGSERIVEVWNKIDRLEPEV 336
>gi|114762884|ref|ZP_01442316.1| GTP-binding protein HflX [Pelagibaca bermudensis HTCC2601]
gi|114544494|gb|EAU47501.1| GTP-binding protein HflX [Roseovarius sp. HTCC2601]
Length = 417
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 132/295 (44%), Positives = 182/295 (61%), Gaps = 30/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
FG G +E ++ I+ AE ++ + V+ +S +QQRNLE+ W +LDR GLI+EIF+
Sbjct: 55 LFGTGKIEELREQIHDAE----VELVLVDGPVSPVQQRNLEKEWKVKLLDRTGLILEIFS 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E LQ E+AAL Y+++RLVR T E R GG GF+ G
Sbjct: 111 DRAATREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQRGGLGFVGG 153
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+++ RR I E+ L Q+E V +TR + R AR + VA+VGYTNA
Sbjct: 154 PGETQIEADRRAIDEQLVRLRRQLERVVKTRDLHRKARAKVP------FPIVALVGYTNA 207
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ +++ + LFATLDP +++V LP+G V+LSDTVGFISDLP +LV AF
Sbjct: 208 GKSTLFNRLTGAEVMAKDMLFATLDPTMRAVKLPTGIDVILSDTVGFISDLPTELVAAFR 267
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEEV+ AD++VHV D + PN EE V +L +GV EE ++E+WNK D
Sbjct: 268 ATLEEVLAADIIVHVRDISHPNTEEQAADVAAILDSLGVDEE--VPLVELWNKTD 320
>gi|398353354|ref|YP_006398818.1| GTPase HflX [Sinorhizobium fredii USDA 257]
gi|390128680|gb|AFL52061.1| GTPase HflX [Sinorhizobium fredii USDA 257]
Length = 440
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 202/357 (56%), Gaps = 41/357 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I HI + G + V+ L+ +QQRNLE+ W
Sbjct: 46 VVHGTVVAVAQPKPGTLLGSGKIEEI-GHILNEKDAG---LVIVDHPLTPVQQRNLEKEW 101
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 102 NAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE------ 149
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR + ER L ++E+VRRTR + R+ R++
Sbjct: 150 -----RQRGGAGFMGGPGETQIEADRRLLQERIVRLERELEQVRRTRQLHRSKRKKVPHP 204
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LSDT
Sbjct: 205 ------IVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILSDT 258
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EK 410
VGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E E
Sbjct: 259 VGFISDLPTHLVAAFRATLEEVLEADLVLHVRDLSDPDNQAQASDVLRILADLGIDEKEG 318
Query: 411 LKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDD 467
+ ++EVWNKID + E+ + + +A D T V V I G DD
Sbjct: 319 AERIVEVWNKIDRLEPEVRE---------ALVKKAASADNT---VAVSAITGEGVDD 363
>gi|84684892|ref|ZP_01012792.1| GTP-binding protein HflX [Maritimibacter alkaliphilus HTCC2654]
gi|84667227|gb|EAQ13697.1| GTP-binding protein HflX [Maritimibacter alkaliphilus HTCC2654]
Length = 427
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 135/321 (42%), Positives = 191/321 (59%), Gaps = 30/321 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP VV + ++ K FG G + + + E++ + ++ +S +QQRN
Sbjct: 42 LPGLEVVGSQIVRLPKPHPGHLFGTGKTDELAALLKA----NEIELVLIDGPVSPVQQRN 97
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LER W +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 98 LEREWKVKILDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHLE- 150
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ + L Q+ +V +TR ++RAAR
Sbjct: 151 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLTRLRKQLAKVVKTRELRRAARA 200
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-V 346
+ VA+VGYTNAGKSTL + ++ +++ + LFATLDP ++ V LP G+ V
Sbjct: 201 K------VPFPVVALVGYTNAGKSTLFNRMTGAEVMAKDMLFATLDPTMRGVDLPGGRTV 254
Query: 347 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 406
+LSDTVGFISDLP QLV AF ATLEEV+ ADL++HV D +E VL +L+ +GV
Sbjct: 255 ILSDTVGFISDLPTQLVAAFRATLEEVLGADLILHVRDIAHDETQEQAEDVLAILEDLGV 314
Query: 407 SEEKLKNMIEVWNKIDYHDEE 427
E+ +IEVWNKID D++
Sbjct: 315 DED--VPLIEVWNKIDKLDDQ 333
>gi|222148577|ref|YP_002549534.1| GTP-binding protein HFLX [Agrobacterium vitis S4]
gi|221735563|gb|ACM36526.1| GTP-binding protein HFLX [Agrobacterium vitis S4]
Length = 444
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 136/319 (42%), Positives = 189/319 (59%), Gaps = 33/319 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+VQ + + R T G G +E IK ++ ++ + V+ L+ +QQRNLE+ W
Sbjct: 49 IVQGLIVAVNQPRPATLIGSGKIEEIKALLDNHDA----GLVIVDHPLTPVQQRNLEKQW 104
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 105 NAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE------ 152
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + +R L ++E+V RTR + RA RR+ H
Sbjct: 153 -----RQRGGAGFMGGPGETQIEADRRMLQDRIVRLERELEQVVRTRQLHRAKRRKVPH- 206
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLS 349
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LS
Sbjct: 207 -------PIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPQGRTVILS 259
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 408
DTVGFISDLP LV AF ATLEEV+EADL++HV D P+ V+++L +G+ E
Sbjct: 260 DTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDMADPDNGAQAGDVMRILSDLGIDEK 319
Query: 409 EKLKNMIEVWNKIDYHDEE 427
E+ + +IEVWNKID + E
Sbjct: 320 ERDERIIEVWNKIDRLEPE 338
>gi|398831858|ref|ZP_10590033.1| GTP-binding protein HflX [Phyllobacterium sp. YR531]
gi|398211184|gb|EJM97806.1| GTP-binding protein HflX [Phyllobacterium sp. YR531]
Length = 471
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 137/317 (43%), Positives = 185/317 (58%), Gaps = 32/317 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + ++ R T G G V+ I I E+ EL + V+ L+ +QQRNLE+AW
Sbjct: 79 IVHSDIVQVSAPRPATLLGSGKVDMIAEIIE--ETHAEL--VIVDHALTPVQQRNLEKAW 134
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDR GLI+EIF A TKE LQ ELA L Y+K RLVR T E
Sbjct: 135 NAKVLDRTGLILEIFGRRAQTKEGTLQVELAHLTYQKGRLVR------SWTHLE------ 182
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + E+ + ++E V RTRA+ R+ RR+ H
Sbjct: 183 -----RQRGGGGFLGGPGETQIESDRRALQEKILRIKRELETVVRTRALHRSKRRKVPH- 236
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLS 349
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + L G+ V+LS
Sbjct: 237 -------PIVALVGYTNAGKSTLFNRMTGAGVVAEDMLFATLDPTLRRIRLEHGEMVILS 289
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGFIS+LP LV AF ATLEEVVEADL++H+ D + P+ V ++ +G+
Sbjct: 290 DTVGFISNLPTHLVAAFRATLEEVVEADLILHIRDISDPDTAAQAEDVHGIMADLGIERG 349
Query: 410 KLKNMIEVWNKIDYHDE 426
K +IEVWNKID DE
Sbjct: 350 DTKRIIEVWNKIDLLDE 366
>gi|92117387|ref|YP_577116.1| HSR1-like GTP-binding protein [Nitrobacter hamburgensis X14]
gi|91800281|gb|ABE62656.1| GTP-binding protein HflX [Nitrobacter hamburgensis X14]
Length = 444
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 136/302 (45%), Positives = 183/302 (60%), Gaps = 28/302 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T+ G G VE + G + D + ++ LS IQQRNLE+AW VLDR GLI+
Sbjct: 65 RPATYLGKGKVE----ELTGLITTEGADLVVMDCALSPIQQRNLEKAWSTKVLDRTGLIL 120
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y++SRLVR T E R GG G
Sbjct: 121 EIFGRRAKTKEGALQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGFG 163
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I +R L +++++V+ TR + RA R+R VA+VG
Sbjct: 164 FMGGPGETQIEADRRLIGDRIVRLENELKKVQATRRLHRAGRQRVP------YRVVALVG 217
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +++ + LFATLDP L+++ LP GK +LSDTVGFIS+LP QLV
Sbjct: 218 YTNAGKSTLFNRLTRAEVQAADMLFATLDPTLRALALPHGGKAMLSDTVGFISNLPTQLV 277
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EAD+++HV D + + E + V VL+Q+G+ ++EVWNKID
Sbjct: 278 AAFRATLEEVMEADVILHVRDISHEDAEAQQHDVEAVLRQLGIDPGHGARILEVWNKIDR 337
Query: 424 HD 425
D
Sbjct: 338 FD 339
>gi|220926315|ref|YP_002501617.1| GTP-binding proten HflX [Methylobacterium nodulans ORS 2060]
gi|219950922|gb|ACL61314.1| GTP-binding proten HflX [Methylobacterium nodulans ORS 2060]
Length = 471
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 153/396 (38%), Positives = 215/396 (54%), Gaps = 61/396 (15%)
Query: 72 KPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFG 131
+PP +A+L+EA+ LA ++ D D D + P + R T+ G
Sbjct: 54 RPP---EARLDEAVGLAAAI--------DLDVVDHLMLPVQAI----------RPSTYLG 92
Query: 132 PGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHA 191
G VE I I AES + + ++ LS +QQRNLE+AWG V+DR GLI+EIF A
Sbjct: 93 KGRVEEIAGRI-AAES---VRLVVMDCALSPVQQRNLEKAWGVKVIDRTGLILEIFGRRA 148
Query: 192 HTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGE 251
T+E LQ E A L Y++SRLVR T E R GG GF+ G GE
Sbjct: 149 STREGALQVEHAHLAYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGE 191
Query: 252 TELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKS 311
T+++ RR I ER + + ++E V RTR + R +RRR VA+VGYTNAGKS
Sbjct: 192 TQIEADRRLIQERMTRIERELETVTRTRGLHRQSRRRV------PYPVVALVGYTNAGKS 245
Query: 312 TLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATL 370
TL + L+ +++ ++ LFATLDP +++ LP G+ +LSDTVGFISDLP L+ AF ATL
Sbjct: 246 TLFNRLTAAEVRAEDLLFATLDPTARAIKLPHGETAILSDTVGFISDLPTMLIAAFRATL 305
Query: 371 EEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGD 430
E+V+EAD L+HV D + + V VL ++G++ E +IEVWNK D D
Sbjct: 306 EDVIEADFLLHVRDMAHEDTQAQGQDVQAVLAELGIAPET-DRIIEVWNKADLLDAP--- 361
Query: 431 VEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 466
+ + + N SR ++PV + + G D
Sbjct: 362 ----ERERLLNLSR----QAGAKPVLISALTGEGTD 389
>gi|148553179|ref|YP_001260761.1| HSR1-like GTP-binding protein [Sphingomonas wittichii RW1]
gi|148498369|gb|ABQ66623.1| GTP-binding protein, HSR1-related [Sphingomonas wittichii RW1]
Length = 442
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 210/393 (53%), Gaps = 63/393 (16%)
Query: 51 VTLFNRDPDDP----PRLFLVQPRLKP--PTFLQAKLNEALCLANSLEEQRDGYFDTDFF 104
+++FNRD DD R + P P +A+L+EA LA ++ D
Sbjct: 1 MSVFNRDEDDGLSRGARALVALPERSGDNPRSAEARLDEAAGLAAAI--------GVDVV 52
Query: 105 DKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQ 164
DK + + + T FG G V+ I A +GE + I V+A L+ IQ
Sbjct: 53 DK----------LAFRLRDPKPATLFGSGQVDQIAL----AARQGEAELIIVDAALTPIQ 98
Query: 165 QRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTF 224
QRNLE+A V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T
Sbjct: 99 QRNLEKATEAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTH 152
Query: 225 GETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRA 284
E R GG GF+ G GET+++ RR I +R + L ++E+VRRTR + RA
Sbjct: 153 LE-----------RQRGGFGFLGGPGETQIEADRRLIRDRMAKLRRELEQVRRTRGLHRA 201
Query: 285 ARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS- 343
R+R +A+VGYTNAGKSTL + ++ + + ++ LFATLDP ++ + LP
Sbjct: 202 RRQRAP------WPVIALVGYTNAGKSTLFNRMTGAKVMAEDLLFATLDPTMRQISLPGL 255
Query: 344 GKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 403
K +LSDTVGF+SDLP QLV AF ATLEEV AD+++HV D + P+ + VL VL +
Sbjct: 256 DKAILSDTVGFVSDLPTQLVAAFRATLEEVTGADIILHVRDISHPDSDAQAGDVLAVLGE 315
Query: 404 VGVSEEKLKN-----------MIEVWNKIDYHD 425
+GV + ++EVWNKID D
Sbjct: 316 IGVGPRAPEGHGSGEAGEGAPILEVWNKIDMLD 348
>gi|227821866|ref|YP_002825836.1| GTP-binding protein [Sinorhizobium fredii NGR234]
gi|227340865|gb|ACP25083.1| putative GTP-binding protein [Sinorhizobium fredii NGR234]
Length = 440
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 136/314 (43%), Positives = 188/314 (59%), Gaps = 33/314 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I HI + G + V+ L+ +QQRNLE+ W
Sbjct: 46 VVHGTVVPVAQPKPGTLLGSGKIEEI-GHILNEKDAG---LVIVDHPLTPVQQRNLEKEW 101
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A TKE LQ +LA L Y+K RLVR T E
Sbjct: 102 NAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE------ 149
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + ER L ++E+VRRTR + R+ R++ H
Sbjct: 150 -----RQRGGAGFMGGPGETQIEADRRLLQERIVRLERELEQVRRTRQLHRSKRKKVPH- 203
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLS 349
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LS
Sbjct: 204 -------PIVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILS 256
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 408
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E
Sbjct: 257 DTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDLSDPDNQAQASDVLRILADLGIDEK 316
Query: 409 EKLKNMIEVWNKID 422
E + ++EVWNKID
Sbjct: 317 EGSERIVEVWNKID 330
>gi|405381115|ref|ZP_11034947.1| GTP-binding protein HflX [Rhizobium sp. CF142]
gi|397322437|gb|EJJ26843.1| GTP-binding protein HflX [Rhizobium sp. CF142]
Length = 441
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 165/434 (38%), Positives = 230/434 (52%), Gaps = 79/434 (18%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L+EA LA ++ D D + + V V +P R T G G +E
Sbjct: 28 ESRLDEATGLAQAI--------DLDVVNASI---VSVSDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 70 IKHLLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRLLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD--- 430
EADL++HV D + + + VL++L +G+ E E + ++EVWNKID + E D
Sbjct: 281 EADLVLHVRDMSDVDNQAQSADVLRILNDLGIDEAEGERRILEVWNKIDRLEPEAHDAMV 340
Query: 431 -----------VEYIDG-------DDIS-NFSRAEDKDTTSEPVDVECIDNYGGDDA--- 468
V I G D+IS S + T + PVD + + D A
Sbjct: 341 QKSSGMKNVIAVSAISGEGVDRLMDEISRRLSGVMTETTVTLPVDKLALLPWLYDHAVVG 400
Query: 469 ---DNNDGFVSEDL 479
DN DG V+ DL
Sbjct: 401 SREDNEDGSVTLDL 414
>gi|260433544|ref|ZP_05787515.1| GTP-binding protein HflX [Silicibacter lacuscaerulensis ITI-1157]
gi|260417372|gb|EEX10631.1| GTP-binding protein HflX [Silicibacter lacuscaerulensis ITI-1157]
Length = 423
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 139/348 (39%), Positives = 201/348 (57%), Gaps = 47/348 (13%)
Query: 81 LNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKC 140
L+EA+ LA +L D D E +V+ P + G FG G +E +
Sbjct: 30 LDEAVALAAALP-------DLDVIGSE-----IVRLPRAQPG-----LLFGSGKIEELGA 72
Query: 141 HINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQA 200
++ E++ + ++ ++ +QQRNLE+AW +LDR GLI+EIF+ A T+E LQ
Sbjct: 73 RF----AENEIELVLIDGPVTPVQQRNLEKAWKVKILDRTGLILEIFSDRARTREGVLQV 128
Query: 201 ELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRR 260
E+AAL Y+++RLVR T E R GG GF+ G GET+++ RR
Sbjct: 129 EMAALSYQRTRLVRA------WTHLE-----------RQRGGLGFVGGPGETQIEADRRA 171
Query: 261 ILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDS 320
I ++ L Q+++V +TR + RAAR + VA+VGYTNAGKSTL + L+ +
Sbjct: 172 IDDQLVRLRRQLQKVVKTRTLHRAARAKV------PYPIVALVGYTNAGKSTLFNRLTGA 225
Query: 321 DLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLL 379
++ + LFATLDP ++ + LP G +V+LSDTVGFIS+LP +LV AF ATLEEV+ ADL+
Sbjct: 226 EVMAKDMLFATLDPTMRRIELPDGPEVILSDTVGFISNLPTELVAAFRATLEEVLAADLI 285
Query: 380 VHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
VHV D + P EE V +L +GV + + +EVWNKID +E
Sbjct: 286 VHVRDISHPETEEQAEDVRSILASLGVDDT--RPQLEVWNKIDLLSDE 331
>gi|409400612|ref|ZP_11250632.1| GTP-binding protein HflX [Acidocella sp. MX-AZ02]
gi|409130430|gb|EKN00196.1| GTP-binding protein HflX [Acidocella sp. MX-AZ02]
Length = 426
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 136/300 (45%), Positives = 185/300 (61%), Gaps = 32/300 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G VE + GA+ +D V+A L+ +QQRNLE+A+G V+DR GLI++IF
Sbjct: 64 TLLGKGQVELAATALRGAQ----VDVAVVDAALTPVQQRNLEKAFGTKVIDRTGLILDIF 119
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A A T+E LQ ELA L Y++SRLVR T E R GG GF+
Sbjct: 120 GARARTREGSLQVELAHLEYQRSRLVR------SWTHLE-----------RQRGGFGFLG 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R L +++EEVRRTR + R AR++ VA+VGYTN
Sbjct: 163 GPGETQIEADRRLIGDRIVKLKAELEEVRRTRGLHRGARKK------VPYPVVALVGYTN 216
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
AGKSTL +AL+ + + ++ +LFATLDP ++ +VLPSG+ ++LSDTVGFIS+LP +LV AF
Sbjct: 217 AGKSTLFNALTGATVMAEDQLFATLDPTMRGLVLPSGRNIILSDTVGFISELPTELVAAF 276
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----VSEEKLKNMIEVWNKID 422
ATLEEV EADLL+HV D + P+ E V VL ++ + E + +EV NK D
Sbjct: 277 RATLEEVAEADLLLHVRDISHPDTEAQARDVRAVLTRMAKEGTLDEGWPSHTLEVLNKAD 336
>gi|403530433|ref|YP_006664962.1| GTP-binding protein hflX [Bartonella quintana RM-11]
gi|403232505|gb|AFR26248.1| GTP-binding protein hflX [Bartonella quintana RM-11]
Length = 447
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 147/380 (38%), Positives = 206/380 (54%), Gaps = 46/380 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G V+ + +I S+ ++ ++ L+ +QQRNLE+ W V+DR LI+EIF
Sbjct: 75 TLLRKGKVDVLAHYI----SEYNIELAIIDHFLTPVQQRNLEKLWNCKVIDRTALILEIF 130
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKE LQ ELA L Y+KSRLVR T E R GG GF+
Sbjct: 131 GDRARTKEGVLQVELAHLSYQKSRLVR------SWTHLE-----------RQRGGCGFLG 173
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR + E+ + ++E V +TRA+ RA R++ VA+VGYTN
Sbjct: 174 GPGETQIEADRRLLQEKIIRIRRELETVIKTRALHRAKRKKTSHP------VVALVGYTN 227
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
GKSTL + LS +D + LFATLDP ++ V+LP GK +LLSDTVGFIS+LP L+ AF
Sbjct: 228 TGKSTLFNRLSGADALAKDMLFATLDPIVRKVILPHGKTILLSDTVGFISNLPTNLIAAF 287
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEEVVEADL++HV D + + H VL+VL +G+ + +++IEVWNKID DE
Sbjct: 288 RATLEEVVEADLILHVRDMSDLDHRAHAQDVLEVLSGLGIDTDDTEHIIEVWNKIDILDE 347
Query: 427 EMGD---------------VEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNN 471
+ V + D + A +K E +EC+ +
Sbjct: 348 YALNVLQTSVKTRLNPAVMVSALKSDGLDQLLAAIEKRIFGEMQSIECL--LRPHEMSLI 405
Query: 472 DGFVSEDLGESMNKNHNDYS 491
D F E+ GE + + H+D S
Sbjct: 406 DWF-YENSGEIIQEGHDDGS 424
>gi|222085896|ref|YP_002544427.1| GTP-binding protein [Agrobacterium radiobacter K84]
gi|398378702|ref|ZP_10536858.1| GTP-binding protein HflX [Rhizobium sp. AP16]
gi|221723344|gb|ACM26500.1| GTP-binding protein [Agrobacterium radiobacter K84]
gi|397724354|gb|EJK84825.1| GTP-binding protein HflX [Rhizobium sp. AP16]
Length = 443
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 188/312 (60%), Gaps = 37/312 (11%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGL 182
R T G G +E I ++ EL+A + V+ L+ +QQRNLE+AW V+DR GL
Sbjct: 60 RPATLLGTGKIEEILALLD------ELNAGLVIVDHPLTPVQQRNLEKAWNAKVIDRTGL 113
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A TKE LQ ELA L Y+K RLVR T E R GG
Sbjct: 114 ILEIFGRRASTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGG 156
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATV 300
GF+ G GET+++ RR++ ER L ++E+V RTR + RA RR+ H V
Sbjct: 157 AGFMGGPGETQIEADRRQLQERIIRLERELEQVVRTRQLHRAKRRKVPH--------PIV 208
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
A+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP
Sbjct: 209 ALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLP 268
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVW 418
LV AF ATLEEV+EADL++HV D + + + V+++L +G+ E E + ++EVW
Sbjct: 269 THLVAAFRATLEEVLEADLILHVRDLSDEDNQAQSADVMRILGDLGIGEAEGAERILEVW 328
Query: 419 NKIDYHDEEMGD 430
NKID + E D
Sbjct: 329 NKIDRLEPEAHD 340
>gi|384218932|ref|YP_005610098.1| GTP-binding protein HFLX [Bradyrhizobium japonicum USDA 6]
gi|354957831|dbj|BAL10510.1| GTP-binding protein HFLX [Bradyrhizobium japonicum USDA 6]
Length = 459
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 137/305 (44%), Positives = 189/305 (61%), Gaps = 30/305 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKG-ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
R T+ G G VE I A +K +++ + ++ L+ IQQRNLE+ VLDR GLI
Sbjct: 80 RPATYIGKGKVEEI-----AALAKSLDVELVVMDCALAPIQQRNLEKELHAKVLDRTGLI 134
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
+EIF A T+E LQ ELA L Y++SRLVR T E R GG
Sbjct: 135 LEIFGRRAKTREGSLQVELAHLNYQRSRLVR------SWTHLE-----------RQRGGF 177
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
GF+ G GET+++ RR I ER S L ++++V+ TR + RA R+R VA+V
Sbjct: 178 GFMGGPGETQIEADRRLIQERISKLEGELKKVQATRRLHRAGRQRVP------YRVVALV 231
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQL 362
GYTNAGKSTL + L+ +D+ + LFATLDP L+++ LP GK +LSDTVGFIS+LP QL
Sbjct: 232 GYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNLPTQL 291
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF ATLEEV+EA++++HV D + + E ++ V VL+Q+G++ + +IEVWNKID
Sbjct: 292 VAAFRATLEEVLEANVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEVWNKID 351
Query: 423 YHDEE 427
+D E
Sbjct: 352 RYDAE 356
>gi|295689384|ref|YP_003593077.1| GTP-binding proten HflX [Caulobacter segnis ATCC 21756]
gi|295431287|gb|ADG10459.1| GTP-binding proten HflX [Caulobacter segnis ATCC 21756]
Length = 446
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 205/361 (56%), Gaps = 52/361 (14%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L EA+ LA +L D D + + P V P+ T FG G VE
Sbjct: 40 ARLEEAVGLAVAL--------DLDVVEALIAPLRAV-TPA---------TLFGKGKVEEF 81
Query: 139 K--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
C + +D + L+ IQQRNLE+A V+DR GLI+EIF A T+E
Sbjct: 82 AAICEVE------HIDVAVFDDQLTPIQQRNLEKALEVKVVDRTGLILEIFARRARTREG 135
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ ELA L Y++SRLVR T E R GG G G GET++++
Sbjct: 136 KLQVELARLDYERSRLVRT------WTHLE-----------RQRGGTGSTGGPGETQIEI 178
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I L ++EEVRRTR + R+AR++ TVA+VGYTNAGKSTL +
Sbjct: 179 DRRLIAGTIIKLKRELEEVRRTRTLHRSARKKVP------YPTVALVGYTNAGKSTLFNR 232
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVE 375
L+++++ + LFATLDP L++V LP G+ ++SDTVGFISDLP +LV+AF ATLEEV E
Sbjct: 233 LTEAEVLAKDMLFATLDPTLRTVKLPDGRPAIMSDTVGFISDLPHELVEAFRATLEEVQE 292
Query: 376 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 435
AD+++HV D P+ E V VL ++GV+ + K ++EVWNKID E+ D E I+
Sbjct: 293 ADVVLHVRDVANPDSEAQARDVETVLSELGVTLDGGKTVVEVWNKIDLLSED--DREIIE 350
Query: 436 G 436
G
Sbjct: 351 G 351
>gi|150396315|ref|YP_001326782.1| HSR1-like GTP-binding protein [Sinorhizobium medicae WSM419]
gi|150027830|gb|ABR59947.1| GTP-binding protein HSR1-related [Sinorhizobium medicae WSM419]
Length = 465
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/323 (42%), Positives = 193/323 (59%), Gaps = 33/323 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I H+ + G + V+ L+ +QQRNLE+ W
Sbjct: 71 VVHGMVVPVAQPKPGTLLGTGKIEEI-GHVLSDKDAG---LVIVDHPLTPVQQRNLEKEW 126
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T+E LQ +LA L Y+K RLVR T E
Sbjct: 127 NAKVIDRTGLILEIFGRRASTREGTLQVDLAHLNYQKGRLVR------SWTHLE------ 174
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + ER L ++E+VRRTR + R+ R++ H
Sbjct: 175 -----RQRGGAGFMGGPGETQIEADRRLLQERIVKLERELEQVRRTRQLHRSKRKKVPH- 228
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLS 349
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LS
Sbjct: 229 -------PIVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILS 281
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 408
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E
Sbjct: 282 DTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDLSDPDNQAQASDVLRILSDLGIDEK 341
Query: 409 EKLKNMIEVWNKIDYHDEEMGDV 431
E + ++EVWNKID + E+ +V
Sbjct: 342 EGAERIVEVWNKIDKVEPEVREV 364
>gi|257219496|gb|ACV50404.1| GTP-binding protein HflX [Rhizobium leguminosarum bv. viciae]
Length = 432
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 205/357 (57%), Gaps = 51/357 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+++L EA LA ++ D D + ++ P V +P R T G G +E
Sbjct: 28 ESRLEEATGLAQAI--------DLDVVNGQIVP---VNDP-------RPATLLGTGKIEE 69
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+E+F A TKE
Sbjct: 70 IKALLDERDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEVFGRRASTKEGT 125
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ +LA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 126 LQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFMGGPGETQIEAD 168
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + +R L ++E+V RTR + RA RR+ H VA+VGYTNAGKSTL +
Sbjct: 169 RRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPH--------PIVALVGYTNAGKSTLFN 220
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF ATLEEV+
Sbjct: 221 RITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVL 280
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEEMGD 430
EADL++ V D + + + + V+++L +G+ E E K +IEVWNKID + E+ D
Sbjct: 281 EADLILRVRDMSDADNQAQSSDVMRILNDLGIDEAEAEKRLIEVWNKIDRLEPEVHD 337
>gi|399039281|ref|ZP_10734885.1| GTP-binding protein HflX [Rhizobium sp. CF122]
gi|398062569|gb|EJL54339.1| GTP-binding protein HflX [Rhizobium sp. CF122]
Length = 444
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 204/357 (57%), Gaps = 40/357 (11%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G ++ IK ++ +S + V+ L+ +QQRNLE+ W V+DR GLI+
Sbjct: 60 RPATLMGTGKIDEIKATLDANDS----GLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLIL 115
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ +LA L Y+K RLVR T E R GG G
Sbjct: 116 EIFGRRASTKEGTLQVDLAHLNYQKGRLVR------SWTHLE-----------RQRGGGG 158
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAV 302
F+ G GET+++ RR + +R L ++E+V RTR + RA R++ H VA+
Sbjct: 159 FMGGPGETQIEADRRMLQDRIIKLERELEQVVRTRQLHRAKRKKVPH--------PIVAL 210
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQ 361
VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP
Sbjct: 211 VGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTH 270
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL-KNMIEVWNK 420
LV AF ATLEEV+EADL++HV D + + + VL++L+ +G+ EE+ K +IEVWNK
Sbjct: 271 LVAAFRATLEEVLEADLILHVRDMSDVDNQAQSVDVLRILKDLGIDEEEGDKRIIEVWNK 330
Query: 421 IDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE 477
ID + E D + S AE+ S + E ID G+ + G ++E
Sbjct: 331 IDRLEREAHDA------IVQKASGAENVVALS-AISGEGIDTLMGEISRRLSGVLTE 380
>gi|13470637|ref|NP_102206.1| GTP binding protein-like [Mesorhizobium loti MAFF303099]
gi|14021379|dbj|BAB47992.1| GTP binding protein-like [Mesorhizobium loti MAFF303099]
Length = 431
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/303 (44%), Positives = 178/303 (58%), Gaps = 28/303 (9%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G VE + ++ EL + V+ L+ +QQRNLE+ VLDR GLI+
Sbjct: 53 RPATLLGSGKVEEFAQIVK--DNDAEL--VIVDHPLTPVQQRNLEKELHAKVLDRTGLIL 108
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y+K RLVR T E R GG G
Sbjct: 109 EIFGERARTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGAG 151
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR++ E+ L ++E VRRTR + RA R++ VA+VG
Sbjct: 152 FLGGPGETQIESDRRQLQEKIIKLKHELETVRRTRDLHRAKRKKVP------FPVVAIVG 205
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ +D+ + LFATLDP L+ V LP G ++LSDTVGFISDLP L+
Sbjct: 206 YTNAGKSTLFNRLTGADVLAQDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDLPTHLI 265
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEVVEADL++H+ D + P+ V ++L +GV K +IEVWNK+D
Sbjct: 266 AAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVERILADLGVDAGDTKRVIEVWNKVDL 325
Query: 424 HDE 426
DE
Sbjct: 326 LDE 328
>gi|86138349|ref|ZP_01056923.1| GTP-binding protein HflX [Roseobacter sp. MED193]
gi|85824874|gb|EAQ45075.1| GTP-binding protein HflX [Roseobacter sp. MED193]
Length = 423
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 196/324 (60%), Gaps = 34/324 (10%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQ 165
LP VV + ++ KA A FG G +E +K H N E+D + ++ +S +QQ
Sbjct: 40 LPDLDVVGSTVVRLPKAHAGMLFGSGKIEELKDLLHSN------EVDLVLIDGPVSPVQQ 93
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 94 RNLEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHL 147
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I ++ +L Q+ +V +TR++ RAA
Sbjct: 148 E-----------RQRGGLGFVGGPGETQIEADRRAIDDQLVNLRRQLAKVVKTRSLHRAA 196
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG- 344
R + VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V +P G
Sbjct: 197 RAKI------PFPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVEMPDGP 250
Query: 345 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 404
+++LSDTVGFISDLP +LV AF ATLEEV+ AD+++HV D + + + V +L +
Sbjct: 251 EIILSDTVGFISDLPTELVAAFRATLEEVLAADVILHVRDISHEDSQNQANDVAAILSTL 310
Query: 405 GVSEEKLKNMIEVWNKIDYHDEEM 428
GV E + + IEVWNK+D E++
Sbjct: 311 GVDETRAQ--IEVWNKLDQLPEDV 332
>gi|254475433|ref|ZP_05088819.1| GTP-binding proten HflX [Ruegeria sp. R11]
gi|214029676|gb|EEB70511.1| GTP-binding proten HflX [Ruegeria sp. R11]
Length = 423
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/323 (41%), Positives = 192/323 (59%), Gaps = 30/323 (9%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQ 165
K LP V+ + ++ KA A FG G +E ++ E++ + ++ +S +QQ
Sbjct: 38 KALPDIEVIGSDVVRLPKAHAGMLFGSGKIEELRDQFKA----NEVELVLIDGPVSPVQQ 93
Query: 166 RNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
RNLE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T
Sbjct: 94 RNLEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHL 147
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
E R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAA
Sbjct: 148 E-----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLDKVVKTRTLHRAA 196
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG- 344
R + VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP G
Sbjct: 197 RAKV------PYPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVELPDGP 250
Query: 345 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 404
+++LSDTVGFISDLP +LV AF ATLEEV+ AD++VHV D + + V +L +
Sbjct: 251 EIILSDTVGFISDLPTELVAAFRATLEEVLAADVVVHVRDISHEESQNQADDVEAILTSL 310
Query: 405 GVSEEKLKNMIEVWNKIDYHDEE 427
GV + + + IEVWNK+D E+
Sbjct: 311 GVDDSRAR--IEVWNKLDLLSED 331
>gi|402770792|ref|YP_006590329.1| GTP-binding protein, HflX [Methylocystis sp. SC2]
gi|401772812|emb|CCJ05678.1| GTP-binding protein, HflX [Methylocystis sp. SC2]
Length = 443
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 147/350 (42%), Positives = 196/350 (56%), Gaps = 46/350 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L EA+ LA ++ D D VV Q P + + R T+ G G VE I
Sbjct: 29 ARLMEAVGLAEAI--------DLD---------VVGQVP-VSLNEVRPATYLGKGKVEEI 70
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
+ ++ + ++ LS +QQRNLERAW V+DR GLI+EIF A TKE L
Sbjct: 71 GELVKSKDAA----LVSMDCQLSPVQQRNLERAWDAKVIDRTGLILEIFGERARTKEGAL 126
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y+KSRLVR T E R GG GF+ G GET+++ R
Sbjct: 127 QVELAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIETDR 169
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R I ER + +++V+RTRA+ R RR VA+VGYTNAGKSTL + L+
Sbjct: 170 RLIEERMRRIEHDLDKVKRTRALHRKTRR------DIPYPVVALVGYTNAGKSTLFNRLT 223
Query: 319 DSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 377
+++ + LFATLDP L+ + LP G ++LLSDTVGFISDLP LV AF ATLEEV AD
Sbjct: 224 KAEVLAQDMLFATLDPTLRQIKLPHGARILLSDTVGFISDLPTMLVSAFRATLEEVTLAD 283
Query: 378 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+++HV D + E V +L ++G++ E ++EVWNKID D E
Sbjct: 284 VVLHVRDVAHEDWEAQAKDVEAILSELGLTGEAEGRVLEVWNKIDALDPE 333
>gi|357025717|ref|ZP_09087833.1| GTP-binding proten HflX [Mesorhizobium amorphae CCNWGS0123]
gi|355542382|gb|EHH11542.1| GTP-binding proten HflX [Mesorhizobium amorphae CCNWGS0123]
Length = 463
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 180/315 (57%), Gaps = 28/315 (8%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T G G VE + +G + + V+ L+ +QQRNLE+ VLDR GLI+
Sbjct: 85 RPATLLGSGKVEEFAEIVK----EGHAEVVIVDHPLTPVQQRNLEKELNAKVLDRTGLIL 140
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y+K RLVR T E R GG G
Sbjct: 141 EIFGERARTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGAG 183
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR + ++ L ++E VRRTR + RA R++ VA+VG
Sbjct: 184 FLGGPGETQIESDRRILQDKIIKLKHELETVRRTRDLHRAKRKK------VPFPVVAIVG 237
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLV 363
YTNAGKSTL + L+ + + ++ LFATLDP L+ V LP G ++LSDTVGFISDLP LV
Sbjct: 238 YTNAGKSTLFNKLTGAGVLAEDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDLPTHLV 297
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEVVEADL++H+ D + P+ V ++L +GV K +IEVWNKID
Sbjct: 298 AAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVERILADLGVDAGDTKRVIEVWNKIDL 357
Query: 424 HDEEMGDVEYIDGDD 438
DE DG+D
Sbjct: 358 LDEGNRARLLADGND 372
>gi|260427894|ref|ZP_05781873.1| GTP-binding protein HflX [Citreicella sp. SE45]
gi|260422386|gb|EEX15637.1| GTP-binding protein HflX [Citreicella sp. SE45]
Length = 417
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 199/350 (56%), Gaps = 44/350 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
FG G +E +K AE ++ + V+ +S +QQRNLE+ W +LDR GLI+EIF+
Sbjct: 55 LFGTGKIEELKTLFEEAE----VELVLVDGPVSPVQQRNLEKQWKVKLLDRTGLILEIFS 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E LQ E+AAL Y+++RLVR T E R GG GF+ G
Sbjct: 111 DRAATREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQRGGLGFVGG 153
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+++ RR I E+ L Q++ V +TR + R AR + VA+VGYTNA
Sbjct: 154 PGETQIEADRRAIDEQLVRLRRQLDRVVKTRDLHRKARAKVP------FPIVALVGYTNA 207
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ +++ + LFATLDP +++V LP+G +V+LSDTVGFISDLP +LV AF
Sbjct: 208 GKSTLFNRLTGAEVMAKDMLFATLDPTMRAVRLPTGIEVILSDTVGFISDLPTELVAAFR 267
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY---- 423
ATLEEV+ AD++VHV D + PN EE V +L +G+ EE + IEVWNKID
Sbjct: 268 ATLEEVLAADVVVHVRDISHPNTEEQSEDVETILASLGLDEEVPR--IEVWNKIDRLHPD 325
Query: 424 ----------HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNY 463
+E++ V + GD + RA E V+ E + +
Sbjct: 326 ERDALLTRAEREEQVYAVSALTGDGLDVMLRAVTDLLQGETVEEELLLGF 375
>gi|221234757|ref|YP_002517193.1| GTP-binding protein hflX [Caulobacter crescentus NA1000]
gi|220963929|gb|ACL95285.1| GTP-binding protein hflX [Caulobacter crescentus NA1000]
Length = 446
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/361 (41%), Positives = 207/361 (57%), Gaps = 52/361 (14%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L EA+ LA +L D + + + P VV P+ T FG G VE
Sbjct: 40 ARLEEAVGLAVAL--------DLNVVEALVAPLRVV-TPA---------TLFGKGKVEEF 81
Query: 139 K--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
C + +D + L+ IQQRNLE+A V+DR GLI+EIF A T+E
Sbjct: 82 AAICEVE------HIDVAVFDDQLTPIQQRNLEKALKVKVVDRTGLILEIFARRARTREG 135
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
+LQ ELA L Y++SRLVR T E R GG G G GET++++
Sbjct: 136 RLQVELARLDYERSRLVRT------WTHLE-----------RQRGGTGSTGGPGETQIEI 178
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I L ++EEVRRTR + R+AR++ TVA+VGYTNAGKSTL +
Sbjct: 179 DRRLIAGTILKLKKELEEVRRTRTLHRSARKKVP------YPTVALVGYTNAGKSTLFNR 232
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVE 375
L+++++ + LFATLDP L++V LP G+ ++SDTVGFISDLP +LV+AF ATLEEV E
Sbjct: 233 LTEAEVLAKDMLFATLDPTLRTVKLPDGRPAIMSDTVGFISDLPHELVEAFRATLEEVQE 292
Query: 376 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 435
AD+++HV D P+ E V VL ++GV+ ++ K ++EVWNK+D E+ D E ++
Sbjct: 293 ADVVLHVRDVANPDSEAQARDVETVLAELGVTLDEGKTVVEVWNKVDLLSED--DREIVE 350
Query: 436 G 436
G
Sbjct: 351 G 351
>gi|153009537|ref|YP_001370752.1| GTP-binding protein HSR1-like [Ochrobactrum anthropi ATCC 49188]
gi|151561425|gb|ABS14923.1| GTP-binding protein HSR1-related [Ochrobactrum anthropi ATCC 49188]
Length = 472
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/352 (40%), Positives = 197/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G VE+
Sbjct: 58 EARLEEAVGLARAIN-----------LDIEHAEIAIVANP-------RPATLLGAGKVES 99
Query: 138 IKCHINGAESKGE--LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
I AE+ E + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 I------AETVKEKAIGLVIVDHALTPVQQRNLEKEWNVKVIDRTGLILEIFGERARTKE 153
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 154 GALQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIE 196
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + ++ + ++E V RTR + R RR+ VA+VGYTNAGKSTL +
Sbjct: 197 ADRRLLQDKILKIKRELETVVRTRTLHRQKRRKVPHP------IVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ +++ ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAEVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + K ++E+WNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVESILSGLGIEPQDRKRVVEIWNKIDNLDE 362
>gi|404319234|ref|ZP_10967167.1| GTP-binding protein HSR1-like [Ochrobactrum anthropi CTS-325]
Length = 472
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/352 (40%), Positives = 197/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G VE+
Sbjct: 58 EARLEEAVGLARAIN-----------LDIEHAEIAIVANP-------RPATLLGAGKVES 99
Query: 138 IKCHINGAESKGE--LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
I AE+ E + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 I------AETVKEKAIGLVIVDHALTPVQQRNLEKEWNVKVIDRTGLILEIFGERARTKE 153
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 154 GALQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIE 196
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + ++ + ++E V RTR + R RR+ VA+VGYTNAGKSTL +
Sbjct: 197 ADRRLLQDKILKIKRELETVVRTRTLHRQKRRKVPHP------IVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ +++ ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAEVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + K ++E+WNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVESILSGLGIEPQDRKRVVEIWNKIDNLDE 362
>gi|239831858|ref|ZP_04680187.1| GTP-binding proten HflX [Ochrobactrum intermedium LMG 3301]
gi|239824125|gb|EEQ95693.1| GTP-binding proten HflX [Ochrobactrum intermedium LMG 3301]
Length = 472
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G VE+
Sbjct: 58 EARLEEAMGLARAIA-----------LDIEHAEIAIVANP-------RPATLLGAGKVES 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAETVQ----EKAIGLVIVDHALTPVQQRNLEKEWNVKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + ++ + ++E V RTR + R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQDKILKIKRELETVVRTRTLHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ +++ ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAEVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + K ++E+WNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVESILAGLGIEPQDRKRVVEIWNKIDNLDE 362
>gi|444308442|ref|ZP_21144087.1| HSR1-like GTP-binding protein [Ochrobactrum intermedium M86]
gi|443488025|gb|ELT50782.1| HSR1-like GTP-binding protein [Ochrobactrum intermedium M86]
Length = 472
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G VE+
Sbjct: 58 EARLEEAMGLARAIA-----------LDIEHAEIAIVANP-------RPATLLGAGKVES 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAETVQ----EKAIGLVIVDHALTPVQQRNLEKEWNVKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + ++ + ++E V RTR + R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQDKILKIKRELETVVRTRTLHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ +++ ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAEVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + K ++E+WNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVESILAGLGIEPQDRKRVVEIWNKIDNLDE 362
>gi|347761715|ref|YP_004869276.1| GTP-binding GTPase [Gluconacetobacter xylinus NBRC 3288]
gi|347580685|dbj|BAK84906.1| GTP-binding GTPase [Gluconacetobacter xylinus NBRC 3288]
Length = 436
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/353 (40%), Positives = 201/353 (56%), Gaps = 40/353 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VVV L R T G G VE++K + + + +++ L+ +QQRNLERA
Sbjct: 47 VVVCQAVLLLRARRPATLLGGGQVESLKETVKA----DNITVVIIDSRLTPVQQRNLERA 102
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR LI++IF A T+E LQ ELA L Y++SRLVR T E
Sbjct: 103 LGCKVIDRTALILDIFGERAATREGTLQVELAHLEYQRSRLVRT------WTHLE----- 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + R ARRR
Sbjct: 152 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRQARRRVP- 204
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++ + LPSG+ V+LSD
Sbjct: 205 -----FPIVALVGYTNAGKSTLFNALTGASVYAQDQLFATLDPTMRGIQLPSGRRVILSD 259
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 406
TVGFISDLP +L+ AF ATLEEV EAD+++HV D + P+ R V++VL+ + +
Sbjct: 260 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVSHPDSASQRNDVIEVLEGMARNGTI 319
Query: 407 SEEKLKNMIEVWNKIDY--HDEEMGD------VEYIDGDDISNFSRAEDKDTT 451
E+ +IEV NK D E +G + I GD + + A D+ T
Sbjct: 320 EEDWQGRIIEVLNKADLVGGREAVGARPGNVVISAITGDGLPDLLAAIDERMT 372
>gi|16125990|ref|NP_420554.1| GTP-binding protein HflX [Caulobacter crescentus CB15]
gi|13423166|gb|AAK23722.1| GTP-binding protein HflX [Caulobacter crescentus CB15]
Length = 427
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/361 (41%), Positives = 207/361 (57%), Gaps = 52/361 (14%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L EA+ LA +L D + + + P VV P+ T FG G VE
Sbjct: 21 ARLEEAVGLAVAL--------DLNVVEALVAPLRVV-TPA---------TLFGKGKVEEF 62
Query: 139 K--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
C + +D + L+ IQQRNLE+A V+DR GLI+EIF A T+E
Sbjct: 63 AAICEVE------HIDVAVFDDQLTPIQQRNLEKALKVKVVDRTGLILEIFARRARTREG 116
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
+LQ ELA L Y++SRLVR T E R GG G G GET++++
Sbjct: 117 RLQVELARLDYERSRLVRT------WTHLE-----------RQRGGTGSTGGPGETQIEI 159
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I L ++EEVRRTR + R+AR++ TVA+VGYTNAGKSTL +
Sbjct: 160 DRRLIAGTILKLKKELEEVRRTRTLHRSARKKVP------YPTVALVGYTNAGKSTLFNR 213
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVE 375
L+++++ + LFATLDP L++V LP G+ ++SDTVGFISDLP +LV+AF ATLEEV E
Sbjct: 214 LTEAEVLAKDMLFATLDPTLRTVKLPDGRPAIMSDTVGFISDLPHELVEAFRATLEEVQE 273
Query: 376 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 435
AD+++HV D P+ E V VL ++GV+ ++ K ++EVWNK+D E+ D E ++
Sbjct: 274 ADVVLHVRDVANPDSEAQARDVETVLAELGVTLDEGKTVVEVWNKVDLLSED--DREIVE 331
Query: 436 G 436
G
Sbjct: 332 G 332
>gi|330993264|ref|ZP_08317200.1| GTP-binding protein hflX [Gluconacetobacter sp. SXCC-1]
gi|329759666|gb|EGG76174.1| GTP-binding protein hflX [Gluconacetobacter sp. SXCC-1]
Length = 436
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/353 (40%), Positives = 201/353 (56%), Gaps = 40/353 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VVV L R T G G VE++K + + + +++ L+ +QQRNLERA
Sbjct: 47 VVVCQAVLLLRARRPATLLGGGQVESLKETVKA----DNITVVIIDSRLTPVQQRNLERA 102
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR LI++IF A T+E LQ ELA L Y++SRLVR T E
Sbjct: 103 LGCKVIDRTALILDIFGERAATREGTLQVELAHLEYQRSRLVRT------WTHLE----- 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + R ARRR
Sbjct: 152 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRQARRRVP- 204
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++ + LPSG+ V+LSD
Sbjct: 205 -----FPIVALVGYTNAGKSTLFNALTGASVYAQDQLFATLDPTMRGIQLPSGRRVILSD 259
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 406
TVGFISDLP +L+ AF ATLEEV EAD+++HV D + P+ R V++VL+ + +
Sbjct: 260 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVSHPDSASQRQDVIEVLEGMARNGTI 319
Query: 407 SEEKLKNMIEVWNKIDY--HDEEMGD------VEYIDGDDISNFSRAEDKDTT 451
E+ +IEV NK D E +G + I GD + + A D+ T
Sbjct: 320 EEDWQGRVIEVLNKADLVGGREAVGARPGNVVISAITGDGLPDLLAAIDERMT 372
>gi|354594033|ref|ZP_09012076.1| GTP-binding protein hflX [Commensalibacter intestini A911]
gi|353673144|gb|EHD14840.1| GTP-binding protein hflX [Commensalibacter intestini A911]
Length = 430
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/351 (42%), Positives = 199/351 (56%), Gaps = 52/351 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
Q++L EA+ LA+S+ + H + N L+S R+ T G G +E+
Sbjct: 32 QSRLEEAIGLASSIRLE--------------ISHTEIIN--LRS--YRSATLIGQGHIES 73
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+K I E+D + LS IQQRNLE+A V+DR LI++IF A TKE
Sbjct: 74 LKDSIQS----NEIDIAIFDTRLSPIQQRNLEKALECKVIDRTALILDIFGERAQTKEGT 129
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y++SRLVR T E R GG GF+ G GET+++
Sbjct: 130 LQVELAHLQYQRSRLVR------SWTHLE-----------RQRGGFGFMGGPGETQIEAD 172
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER L +E+VRRTR + R AR++ VA++GYTNAGKSTL + L
Sbjct: 173 RRLIDERIIRLKKDLEQVRRTRGLHRKARQK------VPFPIVALIGYTNAGKSTLFNNL 226
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ +D+ + +LFATLDP ++ + LPSGK ++LSDTVGFISDLP +L+ AF ATLEE EA
Sbjct: 227 TGADVHAQDQLFATLDPTMRKLQLPSGKTIILSDTVGFISDLPTELIAAFRATLEETAEA 286
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL-----KNMIEVWNKID 422
D+++HV D + P E R V VL + V ++ L KN IEV NKID
Sbjct: 287 DIILHVRDISHPETTEQRQDVFSVLDTM-VKDQILEADWRKNTIEVLNKID 336
>gi|349686568|ref|ZP_08897710.1| GTP-binding GTPase [Gluconacetobacter oboediens 174Bp2]
Length = 436
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 189/316 (59%), Gaps = 32/316 (10%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VVV L R T G G V+++K + + + +++ L+ +QQRNLERA
Sbjct: 47 VVVCQAVLLLRARRPATLLGGGQVDSLKETVKA----DNITVVIIDSRLTPVQQRNLERA 102
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR LI++IF A T+E LQ ELA L Y++SRLVR T E
Sbjct: 103 LGCKVIDRTALILDIFGERAATREGTLQVELAHLEYQRSRLVRT------WTHLE----- 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + R ARRR
Sbjct: 152 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRQARRRVP- 204
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++ + LPSG+ V+LSD
Sbjct: 205 -----FPIVALVGYTNAGKSTLFNALTGASVYAQDQLFATLDPTMRGIQLPSGRRVILSD 259
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 406
TVGFISDLP +L+ AF ATLEEV EAD+++HV D + P+ RT V++VL+ + +
Sbjct: 260 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVSHPDSASQRTDVIEVLEGMARNGTI 319
Query: 407 SEEKLKNMIEVWNKID 422
++ +IEV NK D
Sbjct: 320 EQDWQSRVIEVLNKAD 335
>gi|170747912|ref|YP_001754172.1| GTP-binding proten HflX [Methylobacterium radiotolerans JCM 2831]
gi|170654434|gb|ACB23489.1| GTP-binding proten HflX [Methylobacterium radiotolerans JCM 2831]
Length = 470
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 151/389 (38%), Positives = 214/389 (55%), Gaps = 51/389 (13%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVE 136
++A+L+EA LA ++E D VV++ ++ + R T+ G G VE
Sbjct: 53 VEARLDEATGLAAAIE-----------LD-------VVESLAISLPRIRPSTYLGKGRVE 94
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
I I E + + ++ LS +QQRNLE+AWG V+DR GLI+EIF A T+E
Sbjct: 95 EIAGLIRARE----IGLVVMDCALSPVQQRNLEKAWGAKVIDRTGLILEIFGRRASTREG 150
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
LQ E A L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 151 TLQVEHAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEA 193
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I ER + + ++ V RTR + R +R R VA+VGYTNAGKS+L +A
Sbjct: 194 DRRMIQERMTRIERDLDAVVRTRGLHRQSRARV------PYPIVALVGYTNAGKSSLFNA 247
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVE 375
L+ +++ + LFATLDP ++ LP G+ V+LSDTVGFISDLP L+ AF ATLE+ +E
Sbjct: 248 LTRAEVTAKDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTPLIAAFRATLEDAIE 307
Query: 376 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 435
AD+L+HV D + + E V VL+++G+ E +IEVWNK D D D E
Sbjct: 308 ADVLLHVRDVSHVDSEAQAEDVGAVLRELGI-ETSADRIIEVWNKADLLD----DDERTR 362
Query: 436 GDDISNFSRAEDKDTTSEPVDVECIDNYG 464
++S +RA + ++ PV V + G
Sbjct: 363 LLNLSGQARARNDRDSAAPVLVSALTGEG 391
>gi|121602372|ref|YP_988930.1| GTP-binding proten HflX [Bartonella bacilliformis KC583]
gi|120614549|gb|ABM45150.1| GTP-binding proten HflX [Bartonella bacilliformis KC583]
Length = 457
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/305 (42%), Positives = 180/305 (59%), Gaps = 31/305 (10%)
Query: 128 TFFGPGTVETIK---CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
T FG G VE K H N + + + V+ L+ +QQ NLE+ W V+DR LI+
Sbjct: 74 TLFGSGKVEEFKQVLSHFN----EPRIAVLIVDYSLTPVQQCNLEKLWNCKVIDRTALIL 129
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y+K RLVR T E R GG G
Sbjct: 130 EIFGDRAQTKEGVLQVELAYLSYQKGRLVR------SWTHLE-----------RQRGGHG 172
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR + ++ + +++ V +TRA+ RA R++ +A+VG
Sbjct: 173 FLGGPGETQIEADRRILQDKIVRVRRELKTVIKTRALHRANRKKTCH------PVIALVG 226
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLV 363
YTNAGKSTL + LS +++ + LFATLDP L+ + LP GK VLLSDTVGFIS+LP L+
Sbjct: 227 YTNAGKSTLFNRLSGANILTKDMLFATLDPTLRKITLPYGKTVLLSDTVGFISNLPTHLI 286
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EADL++HV D + P+ + H VL++L +G+ +IEVWNKID
Sbjct: 287 AAFRATLEEVIEADLIIHVRDISDPDHQFHAQDVLEILSSLGIDINDKGRIIEVWNKIDI 346
Query: 424 HDEEM 428
D+ +
Sbjct: 347 LDQHV 351
>gi|429770952|ref|ZP_19302995.1| GTP-binding protein HflX [Brevundimonas diminuta 470-4]
gi|429183166|gb|EKY24233.1| GTP-binding protein HflX [Brevundimonas diminuta 470-4]
Length = 437
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 184/301 (61%), Gaps = 28/301 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E I I A++ +A+ ++ L+ +QQRNLER W V+DR GLI+EIF
Sbjct: 63 TLIGRGKLEEISALILAADA----EAVVIDDQLTPVQQRNLERFWDIKVIDRTGLILEIF 118
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T+E +LQ ELA L Y++SRLVR T E R GG G
Sbjct: 119 GRRARTREGRLQVELARLEYERSRLVRT------WTHLE-----------RQRGGTGGTG 161
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++L RR I +R L +++EEVRRTR + R AR++ +VA+VGYTN
Sbjct: 162 GPGETQIELDRRMIADRIVRLKAELEEVRRTRGLHRKARKQVP------FPSVALVGYTN 215
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
AGKSTL + L+ +++ + LFATLD +++ LP G+ +++DTVGF+SDLP +LV++F
Sbjct: 216 AGKSTLFNRLTGAEVMAKDLLFATLDTTQRTIRLPQGRPAIIADTVGFVSDLPHELVESF 275
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEEV EADL++HV D +P+ V VL+Q+ E K + ++EVWNKID +
Sbjct: 276 RATLEEVGEADLILHVRDIASPDSAAQAKDVEAVLEQIPTPEGKTRRILEVWNKIDLLEA 335
Query: 427 E 427
E
Sbjct: 336 E 336
>gi|421760732|ref|ZP_16197546.1| GTP-binding protein HflX [Bartonella bacilliformis INS]
gi|411174500|gb|EKS44532.1| GTP-binding protein HflX [Bartonella bacilliformis INS]
Length = 458
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/305 (42%), Positives = 180/305 (59%), Gaps = 31/305 (10%)
Query: 128 TFFGPGTVETIK---CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
T FG G VE K H N + + + V+ L+ +QQ NLE+ W V+DR LI+
Sbjct: 75 TLFGSGKVEEFKQVLSHFN----EPRIAVLIVDYSLTPVQQCNLEKLWNCKVIDRTALIL 130
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A TKE LQ ELA L Y+K RLVR T E R GG G
Sbjct: 131 EIFGDRAQTKEGVLQVELAYLSYQKGRLVR------SWTHLE-----------RQRGGHG 173
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR + ++ + +++ V +TRA+ RA R++ +A+VG
Sbjct: 174 FLGGPGETQIEADRRILQDKIVRVRRELKTVIKTRALHRANRKKTCH------PVIALVG 227
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLV 363
YTNAGKSTL + LS +++ + LFATLDP L+ + LP GK VLLSDTVGFIS+LP L+
Sbjct: 228 YTNAGKSTLFNRLSGANILTKDMLFATLDPTLRKITLPYGKTVLLSDTVGFISNLPTHLI 287
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEEV+EADL++HV D + P+ + H VL++L +G+ +IEVWNKID
Sbjct: 288 AAFRATLEEVIEADLIIHVRDISDPDHQFHAQDVLEILSSLGIDINDKGRIIEVWNKIDI 347
Query: 424 HDEEM 428
D+ +
Sbjct: 348 LDQHV 352
>gi|302382897|ref|YP_003818720.1| GTP-binding proten HflX [Brevundimonas subvibrioides ATCC 15264]
gi|302193525|gb|ADL01097.1| GTP-binding proten HflX [Brevundimonas subvibrioides ATCC 15264]
Length = 443
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 179/301 (59%), Gaps = 28/301 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G VE + I AE+ +A ++ L+ +QQRNLE+ W V+DR GLI+EIF
Sbjct: 75 TLFGTGKVEELAALIRAAEA----EAAVIDDDLTPVQQRNLEKEWDCKVIDRTGLILEIF 130
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKE +LQ ELA L Y+KSRLVR T E R GG G
Sbjct: 131 GRRARTKEGRLQVELARLDYEKSRLVRT------WTHLE-----------RQRGGTGSTG 173
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++L RR I +R L ++EEVRRTR + R R++ VA+VGYTN
Sbjct: 174 GPGETQIELDRRLIADRIVKLKGELEEVRRTRGLHRKQRKKAP------FPAVALVGYTN 227
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
AGKSTL + L+ S++ + LFATLD +++ LP G+ +++DTVGFISDLP +LV++F
Sbjct: 228 AGKSTLFNRLTGSEVLAKDLLFATLDTTQRTIRLPQGRPAIIADTVGFISDLPHELVESF 287
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEEV EADL++HV D + + V VL+Q+ E K + ++EVWNK D D
Sbjct: 288 RATLEEVGEADLILHVRDIASADTAAQAKDVEDVLKQIEQPEGKPRRILEVWNKTDLLDP 347
Query: 427 E 427
E
Sbjct: 348 E 348
>gi|126737691|ref|ZP_01753421.1| GTP-binding protein HflX [Roseobacter sp. SK209-2-6]
gi|126721084|gb|EBA17788.1| GTP-binding protein HflX [Roseobacter sp. SK209-2-6]
Length = 423
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/316 (41%), Positives = 190/316 (60%), Gaps = 30/316 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRN 167
LP V+ + ++ KA A FG G +E + + E ++ + ++ +S +QQRN
Sbjct: 40 LPDLDVIGSNVVRLPKAHAGMLFGSGKIEELSTKLKAEE----IELVLIDGPVSPVQQRN 95
Query: 168 LERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGET 227
LE+AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 96 LEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE- 148
Query: 228 GEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARR 287
R GG GF+ G GET+++ RR I E+ L Q+E+V +TR + RAAR
Sbjct: 149 ----------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLEKVAKTRTLHRAARA 198
Query: 288 RHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KV 346
+ VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP G ++
Sbjct: 199 KV------PYPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVELPDGPEI 252
Query: 347 LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV 406
+LSDTVGFISDLP +LV AF ATLEEV+ AD+++HV D + + V +L+ +GV
Sbjct: 253 ILSDTVGFISDLPTELVAAFRATLEEVLAADVILHVRDISHDETAKQAEDVASILESLGV 312
Query: 407 SEEKLKNMIEVWNKID 422
+ + + IE+WNK+D
Sbjct: 313 DDSRAQ--IEIWNKLD 326
>gi|163849524|ref|YP_001637567.1| GTP-binding proten HflX [Methylobacterium extorquens PA1]
gi|163661129|gb|ABY28496.1| GTP-binding proten HflX [Methylobacterium extorquens PA1]
Length = 474
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 181/315 (57%), Gaps = 29/315 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VVQ L K R T+ G G VE I I E + + ++ LS +QQRNLE+AW
Sbjct: 73 VVQAIPLNLPKIRPSTYLGKGRVEEIAGLIKALE----IGLVVMDCALSPVQQRNLEKAW 128
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T+E LQ E A L Y+KSRLVR T E
Sbjct: 129 SAKVIDRTGLILEIFGRRASTREGTLQVEHAHLAYQKSRLVR------SWTHLE------ 176
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ER + + ++ V RTR + R +R R
Sbjct: 177 -----RQRGGFGFLGGPGETQIEADRRIIQERMTRIERDLDAVTRTRGLHRKSRAR---- 227
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKSTL +AL+++ + + LFATLDP ++ LP G+ V+LSDT
Sbjct: 228 --VPYPIVALVGYTNAGKSTLFNALTEAQVVAQDMLFATLDPTARATKLPHGETVILSDT 285
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFISDLP L+ AF ATLE+V+EAD+L+HV D + + E V VL ++G+
Sbjct: 286 VGFISDLPTALIAAFRATLEDVIEADILLHVRDISHADTEAQAEDVGHVLDELGIRSHA- 344
Query: 412 KNMIEVWNKIDYHDE 426
+IEVWNK D D+
Sbjct: 345 DRIIEVWNKADVLDK 359
>gi|254439098|ref|ZP_05052592.1| GTP-binding proten HflX [Octadecabacter antarcticus 307]
gi|198254544|gb|EDY78858.1| GTP-binding proten HflX [Octadecabacter antarcticus 307]
Length = 430
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 217/386 (56%), Gaps = 57/386 (14%)
Query: 63 RLFLVQPRLKPPT---FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSL 119
R +++ P +K ++ L E + LA++L E E+ VV P +
Sbjct: 9 RAYVLHPEIKSDNARRHAKSALEEGVALAHALPEL------------EVAGSQVVSLPKM 56
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
G FG G ++ IK + AE+ + ++ +S +QQRNLE+ WG +LDR
Sbjct: 57 HPG-----MLFGKGKIQEIKGWLEDAEA----GLVLIDGHVSPVQQRNLEKEWGVKLLDR 107
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E R
Sbjct: 108 TGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQ 150
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG GF+ G GET+++ RR I + ++L Q+ +V +TR + R AR +
Sbjct: 151 RGGLGFVGGPGETQVEADRRAIDLQLNNLKKQLSKVVKTRELHRKARAK------VPFPI 204
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDL 358
VA+VGYTNAGKSTL + L+ + +F + LFATLDP ++ V LP+G +++SDTVGFISDL
Sbjct: 205 VALVGYTNAGKSTLFNRLTGASVFVEDMLFATLDPTMRKVDLPNGDAIIMSDTVGFISDL 264
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P QLV +F ATLEEV+EAD+++HV D + P + + VL L+Q+ V+ + MIEV
Sbjct: 265 PTQLVASFRATLEEVLEADVILHVRDISHPQSADQKKAVLDTLRQLDVNPD--VPMIEVL 322
Query: 419 NKIDYHDEEMGDVEYI-----DGDDI 439
NKID E D +Y+ DG+++
Sbjct: 323 NKIDLLAPE--DADYLQALHKDGENV 346
>gi|386349752|ref|YP_006048000.1| small GTP-binding protein domain-containing protein [Rhodospirillum
rubrum F11]
gi|346718188|gb|AEO48203.1| small GTP-binding protein domain-containing protein [Rhodospirillum
rubrum F11]
Length = 435
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 180/301 (59%), Gaps = 28/301 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G VE + I AE+ + + V+ LS IQQRNLERAW V+DR GLI+EIF
Sbjct: 66 TYIGGGAVERM-AGIIAAEA---ISLVVVDTQLSPIQQRNLERAWACKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E ++Q ELA L Y++SRLVR T E R GG GF+
Sbjct: 122 GERARTAEGQMQVELAHLTYQRSRLVR------SWTHLE-----------RQRGGVGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++L RR I +R + L +EEVRRTR + R AR R VA+VGYTN
Sbjct: 165 GPGETQIELDRRLIGDRITRLRKDLEEVRRTRGLHREARARVP------YPVVALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAF 366
+GKSTL + L+ + + LFATLDP ++S+ LPSG KV+LSDTVGF+SDLP +LV AF
Sbjct: 219 SGKSTLFNRLTAGGVLAKDMLFATLDPTMRSLDLPSGRKVILSDTVGFVSDLPHELVAAF 278
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEEV AD++VHV D + + + V VL+++ + E +IE NKID D
Sbjct: 279 RATLEEVKAADVIVHVRDIAGIDSDAQKADVEVVLREMELDERVESGLIEALNKIDLLDS 338
Query: 427 E 427
E
Sbjct: 339 E 339
>gi|15965218|ref|NP_385571.1| GTP-binding protein [Sinorhizobium meliloti 1021]
gi|384529177|ref|YP_005713265.1| GTP-binding proten HflX [Sinorhizobium meliloti BL225C]
gi|384536541|ref|YP_005720626.1| putative GTP-binding protein [Sinorhizobium meliloti SM11]
gi|407720406|ref|YP_006840068.1| GTPase HflX [Sinorhizobium meliloti Rm41]
gi|418404377|ref|ZP_12977838.1| putative GTP-binding protein [Sinorhizobium meliloti CCNWSX0020]
gi|15074398|emb|CAC46044.1| Putative GTP-binding protein [Sinorhizobium meliloti 1021]
gi|333811353|gb|AEG04022.1| GTP-binding proten HflX [Sinorhizobium meliloti BL225C]
gi|336033433|gb|AEH79365.1| putative GTP-binding protein [Sinorhizobium meliloti SM11]
gi|359501646|gb|EHK74247.1| putative GTP-binding protein [Sinorhizobium meliloti CCNWSX0020]
gi|407318638|emb|CCM67242.1| GTPase HflX [Sinorhizobium meliloti Rm41]
Length = 465
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 134/320 (41%), Positives = 191/320 (59%), Gaps = 33/320 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I H+ + G + V+ L+ +QQRNLE+ W
Sbjct: 71 VVHGMIVSVAQPKPGTLLGTGKIEEI-GHVLSEKDAG---LVIVDHPLTPVQQRNLEKEW 126
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T+E LQ +LA L Y+K RLVR T E
Sbjct: 127 NAKVIDRTGLILEIFGRRASTREGTLQVDLAHLNYQKGRLVR------SWTHLE------ 174
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + +R L ++E+VRRTR + R+ R++ H
Sbjct: 175 -----RQRGGAGFMGGPGETQIEADRRLLQDRIVKLERELEQVRRTRQLHRSKRKKVPH- 228
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLS 349
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LS
Sbjct: 229 -------PIVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILS 281
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 408
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E
Sbjct: 282 DTVGFISDLPTHLVAAFRATLEEVLEADLVLHVRDLSDPDNQAQASDVLRILADLGIDEK 341
Query: 409 EKLKNMIEVWNKIDYHDEEM 428
E + ++EVWNKID + E+
Sbjct: 342 EGAERIVEVWNKIDKVEPEV 361
>gi|159044115|ref|YP_001532909.1| GTP-binding protein [Dinoroseobacter shibae DFL 12]
gi|157911875|gb|ABV93308.1| GTP-binding protein [Dinoroseobacter shibae DFL 12]
Length = 415
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 186/309 (60%), Gaps = 30/309 (9%)
Query: 119 LKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLD 178
++ K + FG G +E ++ I E+ + ++ +S +QQRNLERAW +LD
Sbjct: 40 VRLSKVQPGLLFGSGKIEELRARIEA----DEIGLVLIDGPVSPVQQRNLERAWKTKILD 95
Query: 179 RVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR 238
GLI+EIF A T+E LQ ELAAL Y+++RLVR T E R
Sbjct: 96 STGLILEIFADRARTREGVLQVELAALAYQRTRLVR------SWTHLE-----------R 138
Query: 239 GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
GG GF+ G GET+++ RR I E + + Q+ +V +TR + RAAR++
Sbjct: 139 QRGGLGFVGGPGETQIEADRRAIDEAVTRIKRQLAKVVKTRELHRAARKKV------PYP 192
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISD 357
VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++++ LP G +V+LSDTVGFIS
Sbjct: 193 IVALVGYTNAGKSTLFNHLTGAEVLAKDMLFATLDPTMRALKLPDGLEVILSDTVGFISS 252
Query: 358 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 417
LP +LV AF ATLEEV++ADL++HV D P+ V ++L+ +GV +E + MIEV
Sbjct: 253 LPTELVAAFRATLEEVLDADLILHVRDIAHPDSAAQAEDVHKILEALGVKDE--RPMIEV 310
Query: 418 WNKIDYHDE 426
WNK+D E
Sbjct: 311 WNKLDLLPE 319
>gi|334316009|ref|YP_004548628.1| GTP-binding proten HflX [Sinorhizobium meliloti AK83]
gi|334095003|gb|AEG53014.1| GTP-binding proten HflX [Sinorhizobium meliloti AK83]
Length = 465
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 134/320 (41%), Positives = 191/320 (59%), Gaps = 33/320 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I H+ + G + V+ L+ +QQRNLE+ W
Sbjct: 71 VVHGMIVSVAQPKPGTLLGTGKIEEI-GHVLSEKDAG---LVIVDHPLTPVQQRNLEKEW 126
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T+E LQ +LA L Y+K RLVR T E
Sbjct: 127 NAKVIDRTGLILEIFGRRASTREGTLQVDLAHLNYQKGRLVR------SWTHLE------ 174
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + +R L ++E+VRRTR + R+ R++ H
Sbjct: 175 -----RQRGGAGFMGGPGETQIEADRRLLQDRIVKLERELEQVRRTRQLHRSKRKKVPH- 228
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLS 349
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LS
Sbjct: 229 -------PIVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILS 281
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 408
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E
Sbjct: 282 DTVGFISDLPTHLVAAFRATLEEVLEADLVLHVRDLSDPDNQAQASDVLRILADLGIDEK 341
Query: 409 EKLKNMIEVWNKIDYHDEEM 428
E + ++EVWNKID + E+
Sbjct: 342 EGAERIVEVWNKIDKVEPEV 361
>gi|390448826|ref|ZP_10234443.1| GTP-binding proten HflX [Nitratireductor aquibiodomus RA22]
gi|389665420|gb|EIM76888.1| GTP-binding proten HflX [Nitratireductor aquibiodomus RA22]
Length = 457
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 195/369 (52%), Gaps = 35/369 (9%)
Query: 60 DPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSL 119
DP R ++ P L + A + E+ G + D V V P
Sbjct: 22 DPTRAAVISPVLTSERRAAESSAASSRAAEARHEEAIGLTEAIDLDVAFAEIVSVSTP-- 79
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
R T G G +E I + + + ++ L+ +QQRNLE+A VLDR
Sbjct: 80 -----RPATLLGTGKLEEIAARVEEEAVEVVI----IDHPLTPVQQRNLEKALKAKVLDR 130
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
GLI+EIF A TKE +LQ +LA L Y++ RLVR T E R
Sbjct: 131 TGLILEIFGRRARTKEGRLQVDLAHLEYQRGRLVR------SWTHLE-----------RQ 173
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG GF+ G GET+++ RR++ ER L +E+VRRTR + RA RR+
Sbjct: 174 RGGGGFMGGPGETQIEADRRQLQERIMRLKKDLEQVRRTRDLHRAKRRKVP------FPI 227
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
+A+VGYTNAGKSTL + L+ + + ++ LFATLDP L+ V LP G ++LSDTVGFISDL
Sbjct: 228 IAIVGYTNAGKSTLFNRLTGASVMAEDMLFATLDPTLRRVQLPHGTTIILSDTVGFISDL 287
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P LV AF ATLEEV+EADL+VH+ D + P+ V +L +GV K ++EVW
Sbjct: 288 PTHLVAAFRATLEEVIEADLIVHLRDISDPDTAAQAMDVEAILGDLGVDAADRKRVLEVW 347
Query: 419 NKIDYHDEE 427
NKID D E
Sbjct: 348 NKIDSLDPE 356
>gi|83953588|ref|ZP_00962309.1| GTP-binding protein HflX [Sulfitobacter sp. NAS-14.1]
gi|83841533|gb|EAP80702.1| GTP-binding protein HflX [Sulfitobacter sp. NAS-14.1]
Length = 412
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 190/315 (60%), Gaps = 31/315 (9%)
Query: 110 PHVVVQNPSLKSGK-ARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNL 168
PH+ V+ ++ + A FG G +E ++ AE ++ + V+ ++ +QQRNL
Sbjct: 30 PHLDVEGANIVPLRTVSAGMLFGSGKIEELRLVFEEAE----VELVLVDGPVTPVQQRNL 85
Query: 169 ERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETG 228
E+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 86 EKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALNYQRTRLVRA------WTHLE-- 137
Query: 229 EAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR 288
R GG GF+ G GET+++ RR I E+ L Q+++V +TRA+ RAAR +
Sbjct: 138 ---------RQRGGLGFVGGPGETQIESDRRAIDEQLVRLRRQLDKVVKTRALHRAARAK 188
Query: 289 HGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVL 347
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++S+VLP G +++
Sbjct: 189 V------PFPIVALVGYTNAGKSTLFNRMTGADVMAKDMLFATLDPTMRSLVLPDGPEII 242
Query: 348 LSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS 407
LSDTVGFISDLP +LV AF ATLEEV+ AD++ HV D + E V +L +GV
Sbjct: 243 LSDTVGFISDLPTELVAAFRATLEEVLAADIICHVRDISHAETESQARNVRDILTSLGVP 302
Query: 408 EEKLKNMIEVWNKID 422
++ EVWNK+D
Sbjct: 303 KD--TRSFEVWNKLD 315
>gi|56551244|ref|YP_162083.1| GTP-binding protein HflX [Zymomonas mobilis subsp. mobilis ZM4]
gi|56542818|gb|AAV88972.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ZM4]
Length = 460
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 202/383 (52%), Gaps = 48/383 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + +A T FGPG VE I A E+D + V+ L+ IQQRNLE +
Sbjct: 51 VVSKLAFHLRAPKASTLFGPGQVEQIVT----AARDEEVDLVIVDGPLTPIQQRNLETSL 106
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A T E +LQ ELA L Y+ RLVR T E
Sbjct: 107 DVKVIDRTGLILEIFGARAATAEGRLQVELAHLDYQAGRLVRT------WTHLE------ 154
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L + +V RTR + RA R++
Sbjct: 155 -----RQRGGFGFLGGPGETQIEADRRMIRDRMAKLRRDLAQVTRTRGLHRARRKKAP-- 207
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDT 351
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ + LP K +LSDT
Sbjct: 208 ----WPVVALVGYTNAGKSTLFNRMTGADVMAKDLLFATLDPTMRQITLPGIDKAILSDT 263
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE--- 408
VGF+SDLP QLV AF ATLEEV ADL++HV D + E R V +VL ++G++
Sbjct: 264 VGFVSDLPTQLVAAFRATLEEVTAADLILHVRDIAQEDSESEREDVERVLAEIGIAPVED 323
Query: 409 --EKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 466
E +IE WNK D EE + S + A +D DV I + G+
Sbjct: 324 GGEFAIPVIEAWNKSDLLSEEAHE---------SLAAEAARRD------DVALISAWTGE 368
Query: 467 DADNNDGFVSEDLGESMNKNHND 489
++ VS+ L E+ H D
Sbjct: 369 GIEDLRELVSQRLSEAHRLRHID 391
>gi|170744002|ref|YP_001772657.1| GTP-binding proten HflX [Methylobacterium sp. 4-46]
gi|168198276|gb|ACA20223.1| GTP-binding proten HflX [Methylobacterium sp. 4-46]
Length = 474
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 216/396 (54%), Gaps = 61/396 (15%)
Query: 72 KPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFG 131
+PP +A+L+EA+ LA ++ D D+ + P + R T+ G
Sbjct: 57 RPP---EARLDEAVGLAAAI--------DLAVVDRLMLPVQAI----------RPSTYLG 95
Query: 132 PGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHA 191
G VE I I AES + + ++ LS +QQRNLE+AWG V+DR G+I+EIF A
Sbjct: 96 KGRVEEIAGRI-AAES---VRLVVMDCALSPVQQRNLEKAWGVKVIDRTGMILEIFGRRA 151
Query: 192 HTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGE 251
T+E LQ E A L Y++SRLVR T E R GG GF+ G GE
Sbjct: 152 STREGALQVEHAHLAYQRSRLVR------SWTHLE-----------RQRGGFGFLGGPGE 194
Query: 252 TELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKS 311
T+++ RR I ER + + ++ V RTR + R +RRR VA+VGYTNAGKS
Sbjct: 195 TQIEADRRLIQERMTRIERELGTVTRTRGLHRQSRRRV------PYPIVALVGYTNAGKS 248
Query: 312 TLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATL 370
TL + L+++++ ++ LFATLDP +++ LP G+ +LSDTVGFISDLP L+ AF ATL
Sbjct: 249 TLFNRLTEAEVRAEDMLFATLDPTARAIKLPHGETAILSDTVGFISDLPTMLIAAFRATL 308
Query: 371 EEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGD 430
E+V+EAD+L+HV D + + V VL ++G++ + +IEVWNK D E
Sbjct: 309 EDVIEADILLHVRDMAHEDTQAQGEDVQAVLAELGIAPQA-DRIIEVWNKADLLGPE--- 364
Query: 431 VEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 466
+ + + N SR T + PV + + G D
Sbjct: 365 ----ERERLLNLSR----QTGTRPVLISALTGEGTD 392
>gi|433613238|ref|YP_007190036.1| GTP-binding protein HflX [Sinorhizobium meliloti GR4]
gi|429551428|gb|AGA06437.1| GTP-binding protein HflX [Sinorhizobium meliloti GR4]
Length = 465
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/320 (41%), Positives = 191/320 (59%), Gaps = 33/320 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + + T G G +E I H+ + G + V+ L+ +QQRNLE+ W
Sbjct: 71 VVHGMIVPVAQPKPGTLLGTGKIEEI-GHVLSEKDAG---LVIVDHPLTPVQQRNLEKEW 126
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T+E LQ +LA L Y+K RLVR T E
Sbjct: 127 NAKVIDRTGLILEIFGRRASTREGTLQVDLAHLNYQKGRLVR------SWTHLE------ 174
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HG 290
R GG GF+ G GET+++ RR + +R L ++E+VRRTR + R+ R++ H
Sbjct: 175 -----RQRGGAGFMGGPGETQIEADRRLLQDRIVKLERELEQVRRTRQLHRSKRKKVPH- 228
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLS 349
VA+VGYTNAGKSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LS
Sbjct: 229 -------PIVALVGYTNAGKSTLFNRMTGAGVLAEDMLFATLDPTLRRLKLPHGRMVILS 281
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE- 408
DTVGFISDLP LV AF ATLEEV+EADL++HV D + P+ + + VL++L +G+ E
Sbjct: 282 DTVGFISDLPTHLVAAFRATLEEVLEADLVLHVRDLSDPDNQAQASDVLRILADLGIDEK 341
Query: 409 EKLKNMIEVWNKIDYHDEEM 428
E + ++EVWNKID + E+
Sbjct: 342 EGAERIVEVWNKIDKVEPEV 361
>gi|260753127|ref|YP_003226020.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|384411813|ref|YP_005621178.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258552490|gb|ACV75436.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|335932187|gb|AEH62727.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 460
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 202/383 (52%), Gaps = 48/383 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + +A T FGPG VE I A E+D + V+ L+ IQQRNLE +
Sbjct: 51 VVSKLAFHLRAPKASTLFGPGQVEQIVT----AARDEEVDLVIVDGPLTPIQQRNLETSL 106
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A T E +LQ ELA L Y+ RLVR T E
Sbjct: 107 DVKVIDRTGLILEIFGARAATAEGRLQVELAHLDYQAGRLVRT------WTHLE------ 154
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L + +V RTR + RA R++
Sbjct: 155 -----RQRGGFGFLGGPGETQIEADRRMIRDRMAKLRRDLAQVTRTRGLHRARRKKAP-- 207
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDT 351
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ + LP K +LSDT
Sbjct: 208 ----WPVVALVGYTNAGKSTLFNRMTGADVMAKDLLFATLDPTMRQIALPGIDKAILSDT 263
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE--- 408
VGF+SDLP QLV AF ATLEEV ADL++HV D + E R V +VL ++G++
Sbjct: 264 VGFVSDLPTQLVAAFRATLEEVTAADLILHVRDIAQEDSESEREDVERVLAEIGIAPVED 323
Query: 409 --EKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 466
E +IE WNK D EE + S + A +D DV I + G+
Sbjct: 324 GGEFAIPVIEAWNKSDLLSEEAHE---------SLAAEAARRD------DVALISAWTGE 368
Query: 467 DADNNDGFVSEDLGESMNKNHND 489
++ VS+ L E+ H D
Sbjct: 369 GIEDLRELVSQRLSEAHRLRHID 391
>gi|423166786|ref|ZP_17153489.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI435a]
gi|423170840|ref|ZP_17157515.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI474]
gi|423173078|ref|ZP_17159749.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI486]
gi|423178229|ref|ZP_17164873.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI488]
gi|423180270|ref|ZP_17166911.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI010]
gi|423183402|ref|ZP_17170039.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI016]
gi|423185658|ref|ZP_17172272.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI021]
gi|423188794|ref|ZP_17175404.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI259]
gi|374539418|gb|EHR10922.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI474]
gi|374543017|gb|EHR14501.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI435a]
gi|374543633|gb|EHR15115.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI486]
gi|374545468|gb|EHR16929.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI488]
gi|374548834|gb|EHR20281.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI010]
gi|374549465|gb|EHR20908.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI016]
gi|374558452|gb|EHR29845.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI259]
gi|374559749|gb|EHR31134.1| GTP-binding protein HflX [Brucella abortus bv. 1 str. NI021]
Length = 482
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 68 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 109
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 110 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 165
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 166 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 208
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 209 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 260
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 261 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 320
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 321 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 372
>gi|261219457|ref|ZP_05933738.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261321953|ref|ZP_05961150.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|260924546|gb|EEX91114.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294643|gb|EEX98139.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 472
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|83942367|ref|ZP_00954828.1| GTP-binding protein HflX [Sulfitobacter sp. EE-36]
gi|83846460|gb|EAP84336.1| GTP-binding protein HflX [Sulfitobacter sp. EE-36]
Length = 412
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 190/315 (60%), Gaps = 31/315 (9%)
Query: 110 PHVVVQNPSLKSGK-ARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNL 168
PH+ V+ ++ + A FG G +E ++ AE ++ + V+ ++ +QQRNL
Sbjct: 30 PHLDVEGANIVPLRTVSAGMLFGSGKIEELRLVFEEAE----VELVLVDGPVTPVQQRNL 85
Query: 169 ERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETG 228
E+AWG +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 86 EKAWGVKLLDRTGLILEIFSDRAATREGVLQVEMAALNYQRTRLVRA------WTHLE-- 137
Query: 229 EAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR 288
R GG GF+ G GET+++ RR I E+ L Q+++V +TRA+ RAAR +
Sbjct: 138 ---------RQRGGLGFVGGPGETQIESDRRAIDEQLVRLRRQLDKVVKTRALHRAARAK 188
Query: 289 HGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVL 347
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++S+VLP G +++
Sbjct: 189 V------PFPIVALVGYTNAGKSTLFNRMTGADVMAKDMLFATLDPTMRSLVLPDGPEII 242
Query: 348 LSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS 407
LSDTVGFISDLP +LV AF ATLEEV+ AD++ HV D + E V +L +GV
Sbjct: 243 LSDTVGFISDLPTELVAAFRATLEEVLAADIICHVRDISHAETESQARNVRDILTSLGVP 302
Query: 408 EEKLKNMIEVWNKID 422
++ EVWNK+D
Sbjct: 303 KD--TRSFEVWNKLD 315
>gi|265984171|ref|ZP_06096906.1| GTP-binding protein [Brucella sp. 83/13]
gi|306838167|ref|ZP_07471023.1| GTP-binding proten HflX [Brucella sp. NF 2653]
gi|264662763|gb|EEZ33024.1| GTP-binding protein [Brucella sp. 83/13]
gi|306406757|gb|EFM62980.1| GTP-binding proten HflX [Brucella sp. NF 2653]
Length = 472
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|397676775|ref|YP_006518313.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|395397464|gb|AFN56791.1| GTP-binding proten HflX [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 460
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 202/383 (52%), Gaps = 48/383 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + +A T FGPG VE I A E+D + V+ L+ IQQRNLE +
Sbjct: 51 VVSKLAFHLRAPKASTLFGPGQVEQIVT----AARDEEVDLVIVDGPLTPIQQRNLETSL 106
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A T E +LQ ELA L Y+ RLVR T E
Sbjct: 107 DVKVIDRTGLILEIFGARAATAEGRLQVELAHLDYQAGRLVRT------WTHLE------ 154
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L + +V RTR + RA R++
Sbjct: 155 -----RQRGGFGFLGGPGETQIEADRRMIRDRMAKLRRDLAQVTRTRGLHRARRKKAP-- 207
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDT 351
VA+VGYTNAGKSTL + ++ +D+ + LFATLDP ++ + LP K +LSDT
Sbjct: 208 ----WPVVALVGYTNAGKSTLFNRMTGADVMAKDLLFATLDPTMRQIALPGIDKAILSDT 263
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE--- 408
VGF+SDLP QLV AF ATLEEV ADL++HV D + E R V +VL ++G++
Sbjct: 264 VGFVSDLPTQLVAAFRATLEEVTAADLILHVRDIAQEDSESEREDVERVLAEIGIAPVEE 323
Query: 409 --EKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 466
E +IE WNK D EE + S + A +D DV I + G+
Sbjct: 324 GGEFAIPIIEAWNKSDLLSEEAHE---------SLAAEAARRD------DVALISAWTGE 368
Query: 467 DADNNDGFVSEDLGESMNKNHND 489
++ VS+ L E+ H D
Sbjct: 369 GIEDLRELVSQRLSEAHRLRHID 391
>gi|62290025|ref|YP_221818.1| GTP-binding protein [Brucella abortus bv. 1 str. 9-941]
gi|82699952|ref|YP_414526.1| ATP/GTP-binding domain-containing protein [Brucella melitensis
biovar Abortus 2308]
gi|189024265|ref|YP_001935033.1| hypothetical protein BAbS19_I10520 [Brucella abortus S19]
gi|260546577|ref|ZP_05822316.1| GTP1/OBG [Brucella abortus NCTC 8038]
gi|260754853|ref|ZP_05867201.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758070|ref|ZP_05870418.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761894|ref|ZP_05874237.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883865|ref|ZP_05895479.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|376273159|ref|YP_005151737.1| GTP-binding proten HflX [Brucella abortus A13334]
gi|62196157|gb|AAX74457.1| GTP-binding protein, hypothetical [Brucella abortus bv. 1 str.
9-941]
gi|82616053|emb|CAJ11089.1| ATP/GTP-binding site motif A (P-loop):GTP1/OBG [Brucella melitensis
biovar Abortus 2308]
gi|189019837|gb|ACD72559.1| GTP1/OBG [Brucella abortus S19]
gi|260095627|gb|EEW79504.1| GTP1/OBG [Brucella abortus NCTC 8038]
gi|260668388|gb|EEX55328.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260672326|gb|EEX59147.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674961|gb|EEX61782.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873393|gb|EEX80462.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|363400765|gb|AEW17735.1| GTP-binding proten HflX [Brucella abortus A13334]
Length = 472
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|338738898|ref|YP_004675860.1| GTPase (HflX) [Hyphomicrobium sp. MC1]
gi|337759461|emb|CCB65290.1| putative GTPase (HflX) [Hyphomicrobium sp. MC1]
Length = 470
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 194/346 (56%), Gaps = 47/346 (13%)
Query: 80 KLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIK 139
+L EA+ LA ++ D D D + P + P R T G G VE IK
Sbjct: 64 RLAEAVGLAKAI--------DLDIIDSAVVP---IAEP-------RPSTLLGSGKVEEIK 105
Query: 140 CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQ 199
+ ++ E+ + V+ ++ +QQRNLE+AW VLDR GLI+EIF A T+E LQ
Sbjct: 106 DRV----AELEIGLVVVDYNITPVQQRNLEKAWNAKVLDRTGLILEIFGERARTREGVLQ 161
Query: 200 AELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRR 259
ELA L Y+K RLVR T E R GG GF+ G GE +++L RR
Sbjct: 162 VELAHLTYQKGRLVRA------WTHLE-----------RQRGGGGFLGGPGEAQIELDRR 204
Query: 260 RILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSD 319
+ +R + + EV +TR + R RR+ VA+VGYTNAGKSTL + ++
Sbjct: 205 MLQDRIDAIKKDLAEVVKTRDLHRKGRRKV------PYPIVAIVGYTNAGKSTLFNKITG 258
Query: 320 SDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADL 378
+ + + ++FATLDP ++ V LPS +++LSDTVGFISDLP LV AF ATLEEVVEADL
Sbjct: 259 AGVVAMDQVFATLDPTMREVKLPSARRIILSDTVGFISDLPTMLVAAFRATLEEVVEADL 318
Query: 379 LVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK-NMIEVWNKIDY 423
++HV D E V +VL ++G+ ++ N++EVWNKID
Sbjct: 319 ILHVRDIAHEETEAQAQDVEKVLSELGIDTLPIESNILEVWNKIDL 364
>gi|261222277|ref|ZP_05936558.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261314166|ref|ZP_05953363.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317745|ref|ZP_05956942.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261758301|ref|ZP_06002010.1| GTP1/OBG [Brucella sp. F5/99]
gi|265988776|ref|ZP_06101333.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265998241|ref|ZP_06110798.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|340790729|ref|YP_004756194.1| GTP-binding protein HflX [Brucella pinnipedialis B2/94]
gi|260920861|gb|EEX87514.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261296968|gb|EEY00465.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303192|gb|EEY06689.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261738285|gb|EEY26281.1| GTP1/OBG [Brucella sp. F5/99]
gi|262552709|gb|EEZ08699.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264660973|gb|EEZ31234.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|340559188|gb|AEK54426.1| GTP-binding protein HflX [Brucella pinnipedialis B2/94]
Length = 472
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|306841837|ref|ZP_07474519.1| GTP-binding proten HflX [Brucella sp. BO2]
gi|306288064|gb|EFM59461.1| GTP-binding proten HflX [Brucella sp. BO2]
Length = 472
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVANP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|261325201|ref|ZP_05964398.1| GTP-binding protein [Brucella neotomae 5K33]
gi|261301181|gb|EEY04678.1| GTP-binding protein [Brucella neotomae 5K33]
Length = 472
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|237815534|ref|ZP_04594531.1| GTP-binding proten HflX [Brucella abortus str. 2308 A]
gi|237788832|gb|EEP63043.1| GTP-binding proten HflX [Brucella abortus str. 2308 A]
Length = 505
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 91 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 132
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 133 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 188
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 189 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 231
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 232 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 283
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 284 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 343
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 344 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 395
>gi|225627584|ref|ZP_03785621.1| GTP-binding proten HflX [Brucella ceti str. Cudo]
gi|225617589|gb|EEH14634.1| GTP-binding proten HflX [Brucella ceti str. Cudo]
Length = 505
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 91 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 132
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 133 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 188
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 189 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 231
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 232 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 283
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 284 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 343
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 344 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 395
>gi|83593020|ref|YP_426772.1| small GTP-binding protein domain-containing protein [Rhodospirillum
rubrum ATCC 11170]
gi|83575934|gb|ABC22485.1| Small GTP-binding protein domain [Rhodospirillum rubrum ATCC 11170]
Length = 418
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 180/301 (59%), Gaps = 28/301 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G VE + I AE+ + + V+ LS IQQRNLERAW V+DR GLI+EIF
Sbjct: 49 TYIGGGAVERM-AGIIAAEA---ISLVVVDTQLSPIQQRNLERAWACKVIDRTGLILEIF 104
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E ++Q ELA L Y++SRLVR T E R GG GF+
Sbjct: 105 GERARTAEGQMQVELAHLTYQRSRLVR------SWTHLE-----------RQRGGVGFLG 147
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++L RR I +R + L +EEVRRTR + R AR R VA+VGYTN
Sbjct: 148 GPGETQIELDRRLIGDRITRLRKDLEEVRRTRGLHREARARVP------YPVVALVGYTN 201
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAF 366
+GKSTL + L+ + + LFATLDP ++S+ LPSG KV+LSDTVGF+SDLP +LV AF
Sbjct: 202 SGKSTLFNRLTAGGVLAKDMLFATLDPTMRSLDLPSGRKVILSDTVGFVSDLPHELVAAF 261
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEEV AD++VHV D + + + V VL+++ + E +IE NKID D
Sbjct: 262 RATLEEVKAADVIVHVRDIAGIDSDAQKADVEVVLREMELDERVESGLIEALNKIDLLDS 321
Query: 427 E 427
E
Sbjct: 322 E 322
>gi|297248425|ref|ZP_06932143.1| GTP-binding protein HflX [Brucella abortus bv. 5 str. B3196]
gi|297175594|gb|EFH34941.1| GTP-binding protein HflX [Brucella abortus bv. 5 str. B3196]
Length = 490
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 76 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 117
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 118 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 173
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 174 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 216
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 217 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 268
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 269 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 328
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 329 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 380
>gi|256369537|ref|YP_003107047.1| GTP-binding protein, putative [Brucella microti CCM 4915]
gi|255999699|gb|ACU48098.1| GTP-binding protein, putative [Brucella microti CCM 4915]
Length = 472
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|149184562|ref|ZP_01862880.1| GTPase [Erythrobacter sp. SD-21]
gi|148831882|gb|EDL50315.1| GTPase [Erythrobacter sp. SD-21]
Length = 407
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 184/315 (58%), Gaps = 36/315 (11%)
Query: 123 KARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
+ R + FG G VE I+ C N AE + V+ LS IQQRNLE G+ V+DR
Sbjct: 28 EVRPNLLFGAGQVENIRIACEQNEAE------LVVVDGALSPIQQRNLEEKLGRKVIDRT 81
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLI+EIF A T E +LQ ELA L Y++SRLVR T E R
Sbjct: 82 GLILEIFGERAATAEGRLQVELAHLDYQQSRLVR------SWTHLE-----------RQR 124
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG GF+ G GET+++ RR I +R L ++E+VR+TR + R R R V
Sbjct: 125 GGFGFLGGPGETQIEADRRMIRQRMGRLRKELEQVRKTRGLHRERRERA------PWPVV 178
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLP 359
A+VGYTNAGKSTL + L+ +++ ++ LFATLDP ++++ LP K +LSDTVGFISDLP
Sbjct: 179 ALVGYTNAGKSTLFNRLTGAEVMAEDLLFATLDPTMRAISLPGVEKAILSDTVGFISDLP 238
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE----EKLKNMI 415
QLV AF ATLEEV AD++ HV D + + E +T VL+VL+ + V + ++
Sbjct: 239 TQLVAAFRATLEEVTAADVICHVRDISNSSAEAQKTQVLRVLKGLDVIDGDDGTSSIPIL 298
Query: 416 EVWNKIDYHDEEMGD 430
EVWNK D D+E D
Sbjct: 299 EVWNKWDLLDDEKAD 313
>gi|163760113|ref|ZP_02167196.1| GTP-binding protein [Hoeflea phototrophica DFL-43]
gi|162282512|gb|EDQ32800.1| GTP-binding protein [Hoeflea phototrophica DFL-43]
Length = 413
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/309 (43%), Positives = 183/309 (59%), Gaps = 32/309 (10%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T FG G + +K I E+ G + V+ L+ +QQRN+E W V+DR GLI+
Sbjct: 27 RPSTLFGKGKMLEVKGVI---ETTGS-GLVIVDHPLTPVQQRNMETEWKVKVIDRTGLIL 82
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T+E LQ ELA L Y+K RLVR T E R GG G
Sbjct: 83 EIFGRRASTREGVLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGG 125
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAV 302
F+ G GET+++ RR + +R L ++E+VRRTR + RA R++ H VA+
Sbjct: 126 FMGGPGETQIEADRRLLQDRIVKLERELEQVRRTRQLHRAKRKKVPH--------PIVAL 177
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQ 361
VGYTNAGKSTL + ++ +++ ++ LFATLDP L+ + LP G V+LSDTVGFIS LP
Sbjct: 178 VGYTNAGKSTLFNRVTGAEVLAEDMLFATLDPTLRRMKLPHGNTVILSDTVGFISSLPTH 237
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEEVVEADL++HV D P+ V ++L+ +G++E + ++EVWNKI
Sbjct: 238 LVAAFRATLEEVVEADLILHVRDMADPDRASQAGDVEEILKSLGLNEGDGRKLVEVWNKI 297
Query: 422 DYHDEEMGD 430
D EE +
Sbjct: 298 DLLSEEAAE 306
>gi|161619062|ref|YP_001592949.1| GTP-binding protein HSR1-related [Brucella canis ATCC 23365]
gi|163843379|ref|YP_001627783.1| GTP-binding protein HSR1-related [Brucella suis ATCC 23445]
gi|260566354|ref|ZP_05836824.1| GTP1/OBG protein [Brucella suis bv. 4 str. 40]
gi|376276278|ref|YP_005116717.1| GTP1/OBG protein [Brucella canis HSK A52141]
gi|161335873|gb|ABX62178.1| GTP-binding protein HSR1-related [Brucella canis ATCC 23365]
gi|163674102|gb|ABY38213.1| GTP-binding protein HSR1-related [Brucella suis ATCC 23445]
gi|260155872|gb|EEW90952.1| GTP1/OBG protein [Brucella suis bv. 4 str. 40]
gi|363404845|gb|AEW15140.1| GTP1/OBG protein [Brucella canis HSK A52141]
Length = 472
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 196/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|294084362|ref|YP_003551120.1| GTPase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292663935|gb|ADE39036.1| GTPase [Candidatus Puniceispirillum marinum IMCC1322]
Length = 430
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 134/323 (41%), Positives = 191/323 (59%), Gaps = 33/323 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELD--AIFVNAILSGIQQRNLER 170
VV ++ + RA +F G G + + AE D I +N LS +QQRNLE
Sbjct: 40 VVVAETVNISQPRAGSFLGKGYADQL------AEMAEAYDHPLIIINTTLSSVQQRNLET 93
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR LI+EIF A A T +LQ ELAAL +++SRLVR T E
Sbjct: 94 LTSCKVIDRTALILEIFGARAQTHAGRLQVELAALTFQRSRLVR------SWTHLE---- 143
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
R GG GF+ G GE +++L RR +++R + ++ EV RTR +QR R R
Sbjct: 144 -------RQRGGGGFLGGPGERQIELDRRMLMDRVMRIKGELREVERTRHLQRRNRDRSE 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLS 349
T+A++GYTNAGKSTL + L+ +D+ S LFATLDP ++ + LPSG+ +L+
Sbjct: 197 TP------TLALIGYTNAGKSTLFNMLTGADVLSKDMLFATLDPTMRGMKLPSGRRAVLA 250
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV-SE 408
DTVGFIS LP +LV+AF +TLEEVVEAD+LVHV D ++P + E V Q+L+++G+ +E
Sbjct: 251 DTVGFISQLPTELVEAFKSTLEEVVEADILVHVHDASSPMVAEEYADVCQILEELGLDAE 310
Query: 409 EKLKNMIEVWNKIDYHDEEMGDV 431
+ + +I + NK D D+ GD+
Sbjct: 311 MQAERVIHILNKSDKIDDMAGDM 333
>gi|440226582|ref|YP_007333673.1| GTP-binding protein HflX [Rhizobium tropici CIAT 899]
gi|440038093|gb|AGB71127.1| GTP-binding protein HflX [Rhizobium tropici CIAT 899]
Length = 444
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 206/363 (56%), Gaps = 54/363 (14%)
Query: 72 KPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFG 131
+PP +++L EA LA ++ D D + + P + +P R T G
Sbjct: 29 RPP---ESRLEEAKGLALAI--------DLDVVNGSIVP---ISDP-------RPATLLG 67
Query: 132 PGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNA 189
G +E I ++ E +A + V+ L+ +QQRNLE+AW V+DR GLI+EIF
Sbjct: 68 TGKIEEILALLD------EFNAGLVIVDHPLTPVQQRNLEKAWNAKVIDRTGLILEIFGR 121
Query: 190 HAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGA 249
A TKE LQ ELA L Y+K RLVR T E R GG GF+ G
Sbjct: 122 RASTKEGTLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGAGFMGGP 164
Query: 250 GETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAG 309
GET+++ RR + ER L ++E+V RTR + RA R++ VA+VGYTNAG
Sbjct: 165 GETQIEADRRMLQERIIRLERELEQVVRTRQLHRAKRKKVPHP------IVALVGYTNAG 218
Query: 310 KSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHA 368
KSTL + ++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFISDLP LV AF A
Sbjct: 219 KSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRA 278
Query: 369 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNKIDYHDEE 427
TLEEV+EADL++HV D + + + V+++L +G+ E E + ++EVWNKID + E
Sbjct: 279 TLEEVLEADLILHVRDLSDDDNQAQSADVMRILGDLGIGEAEGAERILEVWNKIDRLEPE 338
Query: 428 MGD 430
D
Sbjct: 339 AHD 341
>gi|414342884|ref|YP_006984405.1| GTP-binding proten HflX [Gluconobacter oxydans H24]
gi|411028219|gb|AFW01474.1| GTP-binding proten HflX [Gluconobacter oxydans H24]
Length = 435
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 205/365 (56%), Gaps = 48/365 (13%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ ++ R T G G VE + A ++D + ++A LS QQRNLE+A
Sbjct: 48 VIVRQAAILLRARRPATLLGSGQVE----QLAEAVKLDQVDVVIIDARLSPGQQRNLEKA 103
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR GLI++IF A A T+E LQ ELA L Y++SRLVR+ T E
Sbjct: 104 LGCKVMDRTGLILDIFGARAATREGVLQVELAHLEYQRSRLVRL------WTHLE----- 152
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR + ER + ++E+VRRTR + R AR+R
Sbjct: 153 ------RQRGGFGFLGGPGETQMEADRRMLAERIGKIKKELEQVRRTRGLHRDARKRV-- 204
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
VA+VGYTNAGKSTL +AL+ + + + +LFATLDP ++++ LPSG+ V+LSD
Sbjct: 205 ----PFPIVALVGYTNAGKSTLFNALTGASVHAQDQLFATLDPTMRALRLPSGRNVILSD 260
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV---GVS 407
TVGFISDLP +L+ AF ATLEEV +AD+++HV D P+ R VL VL + G+
Sbjct: 261 TVGFISDLPTELIAAFRATLEEVSQADVILHVRDIAHPDSAAQRADVLNVLDGMVRDGML 320
Query: 408 EEKL-KNMIEVWNKIDYHDEEMGDVE------------YIDGDDISNFSRAEDKDTTSEP 454
+ + + IEV NK D MG VE I GD I + D+ T
Sbjct: 321 DAQWPERTIEVLNKADL----MGGVEAVPKRENAVAISAITGDGIPDLFETLDQYLTQAM 376
Query: 455 VDVEC 459
+D+
Sbjct: 377 LDIRV 381
>gi|294852449|ref|ZP_06793122.1| GTP-binding protein HflX [Brucella sp. NVSL 07-0026]
gi|294821038|gb|EFG38037.1| GTP-binding protein HflX [Brucella sp. NVSL 07-0026]
Length = 496
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 195/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHFE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLHRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|410943656|ref|ZP_11375397.1| GTP-binding protein HflX [Gluconobacter frateurii NBRC 101659]
Length = 435
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 205/365 (56%), Gaps = 48/365 (13%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ ++ R T G G VE + A ++D + V+A LS QQRNLE+A
Sbjct: 48 VIVRQAAILLRARRPATLLGSGQVE----QLAEAVKLDQVDVVIVDARLSPGQQRNLEKA 103
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR GLI++IF A A T+E LQ ELA L Y++SRLVR+ T E
Sbjct: 104 LGCKVMDRTGLILDIFGARAATREGVLQVELAHLEYQRSRLVRL------WTHLE----- 152
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR + ER + ++E+VRRTR + R AR+R
Sbjct: 153 ------RQRGGFGFLGGPGETQMEADRRMLAERIGKIKQELEKVRRTRGLHRDARKRV-- 204
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
VA+VGYTNAGKSTL +AL+ + + + +LFATLDP ++++ LPSG+ V+LSD
Sbjct: 205 ----PFPIVALVGYTNAGKSTLFNALTGASVHAQDQLFATLDPTMRALRLPSGRNVILSD 260
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV---GVS 407
TVGFISDLP +L+ AF ATLEEV +AD+++HV D P+ R VL VL + G+
Sbjct: 261 TVGFISDLPTELIAAFRATLEEVSQADVILHVRDIAHPDSAAQRADVLNVLDGMVRDGML 320
Query: 408 EEKL-KNMIEVWNKIDYHDEEMGDVE------------YIDGDDISNFSRAEDKDTTSEP 454
+ + + IEV NK D MG VE I GD I + D+ T
Sbjct: 321 DAQWPERTIEVLNKADL----MGGVEAVPKRENAVAISAITGDGIPDLFETLDQYLTQAM 376
Query: 455 VDVEC 459
+D+
Sbjct: 377 LDIRV 381
>gi|349699566|ref|ZP_08901195.1| GTP-binding GTPase [Gluconacetobacter europaeus LMG 18494]
Length = 436
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 188/316 (59%), Gaps = 32/316 (10%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VVV L R T G G V+++K + + + +++ L+ +QQRNLERA
Sbjct: 47 VVVCQAVLLLRARRPATLLGGGQVDSLKETVKA----DNITVVIIDSRLTPVQQRNLERA 102
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR LI++IF A T+E LQ ELA L Y++SRLVR T E
Sbjct: 103 LGCKVIDRTALILDIFGERAATREGTLQVELAHLEYQRSRLVRT------WTHLE----- 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + R ARRR
Sbjct: 152 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRQARRRVP- 204
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++ + LPSG+ V+LSD
Sbjct: 205 -----FPIVALVGYTNAGKSTLFNALTGASVYAQDQLFATLDPTMRGIQLPSGRRVILSD 259
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 406
TVGFISDLP +L+ AF ATLEEV EAD+++HV D + P+ R V++VL+ + +
Sbjct: 260 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVSHPDSASQRNDVIEVLEGMARNGTI 319
Query: 407 SEEKLKNMIEVWNKID 422
++ +IEV NK D
Sbjct: 320 EQDWQSRVIEVLNKAD 335
>gi|344924447|ref|ZP_08777908.1| GTPase [Candidatus Odyssella thessalonicensis L13]
Length = 427
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 189/313 (60%), Gaps = 31/313 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V ++ K T G G VE +K I S+ +++ + + L+ +QQRNLE+AW
Sbjct: 41 IVYTQLIQLKKVTPATMIGQGNVEALKEVI----SEHQIELVVFDGPLTPVQQRNLEKAW 96
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI+EIF A T E +LQ ELAAL Y++SRLVR T E
Sbjct: 97 NCKVIDRTSLILEIFGERARTAEGRLQVELAALTYQRSRLVR------SWTHLE------ 144
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF G GET+L+L RR I ER + +++E+ +RTR++ R+AR
Sbjct: 145 -----RQRGGFGFTGGPGETQLELDRRMIDERIIRIKTELEKTKRTRSLHRSAR------ 193
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKSTL + L+ + + + LFATLDP ++ + LPSG+ ++LSDT
Sbjct: 194 ADIPYPVVALVGYTNAGKSTLFNKLTHAQVLAKDMLFATLDPTMRQIKLPSGRTIILSDT 253
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS LP QL+ AF ATLEEV ADL++HV DC+ P+ V +VL ++G+ E++L
Sbjct: 254 VGFISHLPTQLIAAFRATLEEVCAADLILHVQDCSHPDSTYQAQEVNKVLTELGL-EKEL 312
Query: 412 KN--MIEVWNKID 422
++ ++ V NKID
Sbjct: 313 EDGTVVNVLNKID 325
>gi|188582188|ref|YP_001925633.1| GTP-binding proten HflX [Methylobacterium populi BJ001]
gi|179345686|gb|ACB81098.1| GTP-binding proten HflX [Methylobacterium populi BJ001]
Length = 471
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 198/350 (56%), Gaps = 47/350 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L+EA+ LA +++ D V +Q P R T+ G G VE
Sbjct: 54 EARLDEAVGLAAAID-----------LDVARAIAVHLQRP-------RPSTYLGKGRVEE 95
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ I E + + ++ LS +QQRNLE+AWG V+DR GLI+EIF A T+E
Sbjct: 96 VAGLIKAEE----IGLVVMDCALSPVQQRNLEKAWGAKVIDRTGLILEIFGRRASTREGT 151
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ E A L Y+KSRLVR T E R GG GF+ G GET+++
Sbjct: 152 LQVEHAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEAD 194
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I ER + + ++ V RTR + R +R R VA+VGYTNAGKSTL +AL
Sbjct: 195 RRMIQERMTRIERDLDAVTRTRGLHRKSRARV------PYPIVALVGYTNAGKSTLFNAL 248
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ +++ + LFATLDP ++ LP G+ V+LSDTVGFISDLP L+ AF ATLE+V+EA
Sbjct: 249 TKAEVRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEA 308
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
D+L+HV D + + + V VL+++G+ E + +IEVWNK D D+
Sbjct: 309 DILLHVRDVSHGDTQAQAEDVEGVLRELGI-EPDAERIIEVWNKADLLDD 357
>gi|341615350|ref|ZP_08702219.1| GTPase [Citromicrobium sp. JLT1363]
Length = 438
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 180/313 (57%), Gaps = 36/313 (11%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T FG G VE I AE+ + I V+ LS IQQR LE + V+DR GLI+
Sbjct: 53 RPATLFGAGQVEKIGTDAELAEA----ELIIVDGALSAIQQRTLEEQLKRKVIDRTGLIL 108
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T E +LQ ELA L Y+ SRLVR T E R GG G
Sbjct: 109 EIFGERAATAEGRLQVELAHLDYQASRLVR------SWTHLE-----------RQRGGYG 151
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I R S L ++E+VR+TRA+ R R R +A+VG
Sbjct: 152 FLGGPGETQIEADRRMIRTRMSRLRKELEQVRKTRALHRERRTRAP------WPVIALVG 205
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLV 363
YTNAGKST+ + L+ +D+ ++ LFATLDP ++++ LP K +LSDTVGFISDLP QLV
Sbjct: 206 YTNAGKSTIFNRLTGADVMAEDLLFATLDPTMRAIGLPGVEKAILSDTVGFISDLPTQLV 265
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV--------SEEKLKNMI 415
AF ATLEEV ADL++HV D P+ +T VL VL+ +GV E + ++
Sbjct: 266 AAFRATLEEVTNADLILHVRDIANPSSAAQKTQVLDVLRGLGVVGAPEEGAEEASVIPIL 325
Query: 416 EVWNKIDYHDEEM 428
EVWNK D ++M
Sbjct: 326 EVWNKWDLLPDDM 338
>gi|296114949|ref|ZP_06833595.1| GTP-binding protein hflX [Gluconacetobacter hansenii ATCC 23769]
gi|295978507|gb|EFG85239.1| GTP-binding protein hflX [Gluconacetobacter hansenii ATCC 23769]
Length = 436
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/316 (41%), Positives = 185/316 (58%), Gaps = 32/316 (10%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V++ L R T G G VE++ + + + +++ L+ +QQRNLERA
Sbjct: 47 VIICKAVLLLRARRPATLLGSGQVESLHATVRA----DNITVVIIDSRLTPVQQRNLERA 102
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR LI++IF A TKE LQ ELA L Y++SRLVR T E
Sbjct: 103 LGCKVIDRTALILDIFGERAATKEGSLQVELAHLEYQRSRLVRT------WTHLE----- 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + R ARRR
Sbjct: 152 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRQARRRVP- 204
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++ + LPSG+ ++LSD
Sbjct: 205 -----FPVVALVGYTNAGKSTLFNALTGASVYAQDQLFATLDPTMRGIRLPSGRQIILSD 259
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 406
TVGFISDLP +L+ AF ATLEEV EAD+++HV D + P R V++VL+ + +
Sbjct: 260 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDASHPETSAQRADVVEVLEGMAHSGTI 319
Query: 407 SEEKLKNMIEVWNKID 422
+ +IEV NK D
Sbjct: 320 EPDWQSRVIEVLNKAD 335
>gi|393767216|ref|ZP_10355766.1| GTP-binding proten HflX [Methylobacterium sp. GXF4]
gi|392727313|gb|EIZ84628.1| GTP-binding proten HflX [Methylobacterium sp. GXF4]
Length = 473
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 150/393 (38%), Positives = 214/393 (54%), Gaps = 51/393 (12%)
Query: 73 PPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGP 132
P ++A+L+EA LA ++E D VV++ ++ + R T+ G
Sbjct: 52 PTRSVEARLDEATGLAAAIE-----------LD-------VVESLAISLPRIRPSTYLGK 93
Query: 133 GTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAH 192
G VE I I E + + ++ LS +QQRNLE+ WG V+DR GLI+EIF A
Sbjct: 94 GRVEEIAGLIRARE----IGLVVMDCALSPVQQRNLEKEWGAKVIDRTGLILEIFGRRAS 149
Query: 193 TKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGET 252
T+E LQ E A L Y+KSRLVR T E R GG GF+ G GET
Sbjct: 150 TREGTLQVEHAHLAYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGET 192
Query: 253 ELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKST 312
+++ RR I ER + + ++ V RTR + R +R R VA+VGYTNAGKS+
Sbjct: 193 QIEADRRMIQERMTRIERDLDAVVRTRGLHRQSRARV------PYPIVALVGYTNAGKSS 246
Query: 313 LVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLE 371
L + L+ +++ + LFATLDP ++ LP G+ V+LSDTVGFISDLP L+ AF ATLE
Sbjct: 247 LFNTLTRAEVTAKDMLFATLDPTARATKLPHGETVILSDTVGFISDLPTPLIAAFRATLE 306
Query: 372 EVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDV 431
+ +EAD+L+HV D + + E V +VL+++G+ E + +IEVWNK D D D
Sbjct: 307 DAIEADVLLHVRDVSHVDSEAQAEDVGEVLRELGI-ETTAERIIEVWNKSDLLD----DD 361
Query: 432 EYIDGDDISNFSRAEDKDTTSEPVDVECIDNYG 464
E ++S S+A + + PV V + G
Sbjct: 362 ERTRLMNLSGQSKARNDRDSDAPVLVSALTGEG 394
>gi|453328963|dbj|GAC88839.1| GTP-binding GTPase [Gluconobacter thailandicus NBRC 3255]
Length = 432
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 205/365 (56%), Gaps = 48/365 (13%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ ++ R T G G VE + A ++D + ++A LS QQRNLE+A
Sbjct: 45 VIVRQAAILLRARRPATLLGSGQVE----QLAEAVKLDQVDVVIIDARLSPGQQRNLEKA 100
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR GLI++IF A A T+E LQ ELA L Y++SRLVR+ T E
Sbjct: 101 LGCKVMDRTGLILDIFGARAATREGVLQVELAHLEYQRSRLVRL------WTHLE----- 149
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR + ER + ++E+VRRTR + R AR+R
Sbjct: 150 ------RQRGGFGFLGGPGETQMEADRRMLAERIGKIKKELEQVRRTRGLHRDARKRV-- 201
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
VA+VGYTNAGKSTL +AL+ + + + +LFATLDP ++++ LPSG+ V+LSD
Sbjct: 202 ----PFPIVALVGYTNAGKSTLFNALTGASVHAQDQLFATLDPTMRALRLPSGRNVILSD 257
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV---GVS 407
TVGFISDLP +L+ AF ATLEEV +AD+++HV D P+ R VL VL + G+
Sbjct: 258 TVGFISDLPTELIAAFRATLEEVSQADVILHVRDIAHPDSAAQRADVLNVLDGMVRDGML 317
Query: 408 EEKL-KNMIEVWNKIDYHDEEMGDVE------------YIDGDDISNFSRAEDKDTTSEP 454
+ + + IEV NK D MG VE I GD I + D+ T
Sbjct: 318 DAQWPERTIEVLNKADL----MGGVEAVPKRENAVAISAITGDGIPDLFETLDQYLTQAM 373
Query: 455 VDVEC 459
+D+
Sbjct: 374 LDIRV 378
>gi|56696948|ref|YP_167310.1| GTP-binding protein HflX [Ruegeria pomeroyi DSS-3]
gi|56678685|gb|AAV95351.1| GTP-binding protein HflX [Ruegeria pomeroyi DSS-3]
Length = 424
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 218/402 (54%), Gaps = 54/402 (13%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + ++ K FG G VE + + E++ + ++ LS +QQRNLE+AW
Sbjct: 46 VVGSGIVRLPKPHPGHLFGSGKVEELATLFH----DNEVELVLIDGPLSPVQQRNLEKAW 101
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 102 KVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE------ 149
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + R AR +
Sbjct: 150 -----RQRGGLGFVGGPGETQIEADRRAIDEQLVRLKRQLDKVVKTRELHRKARAKV--- 201
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ VVLP G +V+LSDT
Sbjct: 202 ---PYPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVVLPDGPEVILSDT 258
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFISDLP +LV AF ATLEEV+ ADL+VHV D EE V +L +GV E +
Sbjct: 259 VGFISDLPTELVAAFRATLEEVLAADLIVHVRDIHHAATEEQARDVETILASLGVDEGRP 318
Query: 412 KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNN 471
K EVWNK+D D + RA ++ T+ + + G+ ++
Sbjct: 319 K--FEVWNKVDLLDPD---------------KRAALRERTARDPSLFAVSAVTGEGLESL 361
Query: 472 DGFVSEDLGESMNKN--HNDYSDG----WLLSGDEQDNVEEE 507
++E L E+ ++ ++DG WL + QD V+ E
Sbjct: 362 LTAIAEALAETRSEAVLTLGFADGKRRAWLFA---QDVVQAE 400
>gi|402849150|ref|ZP_10897390.1| GTP-binding protein HflX [Rhodovulum sp. PH10]
gi|402500463|gb|EJW12135.1| GTP-binding protein HflX [Rhodovulum sp. PH10]
Length = 465
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 199/346 (57%), Gaps = 47/346 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L+EA LA ++ D D VV++ + G R T+ G G VE
Sbjct: 54 EARLDEATGLARAI--------DLD----------VVESGIVLLGAVRPSTYLGKGKVEE 95
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + E+ + ++ LS +QQRNLE+AW V+DR GLI+EIF A T+E
Sbjct: 96 IAGLVKSTEAS----LVVMDCALSPVQQRNLEKAWNAKVVDRTGLILEIFGRRAATREGT 151
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+KSRLVR T E R GG GF+ G GET+L+
Sbjct: 152 LQVELAHLTYQKSRLVR------SWTHLE-----------RQRGGFGFLGGPGETQLETD 194
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I +R + ++ V+RTRA+ R +R+R VA+VGYTNAGKSTL + L
Sbjct: 195 RRIIQDRIRRIEHDLDTVKRTRALHRTSRKRV------PYPIVALVGYTNAGKSTLFNRL 248
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ S + + LFATLDP L++V LP G +V+LSDTVGF+SDLP LV AF ATLEEV+EA
Sbjct: 249 TRSGVLATDMLFATLDPTLRAVDLPDGPRVILSDTVGFVSDLPTMLVAAFRATLEEVIEA 308
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
DL++HV D + + + V VL ++G+ E + ++EVWNKID
Sbjct: 309 DLILHVRDVSHGDTQAQSKDVDTVLAELGIPPEDPR-LLEVWNKID 353
>gi|423716770|ref|ZP_17690960.1| GTP-binding protein HflX [Bartonella tamiae Th307]
gi|395428844|gb|EJF94919.1| GTP-binding protein HflX [Bartonella tamiae Th307]
Length = 456
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/351 (38%), Positives = 199/351 (56%), Gaps = 46/351 (13%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVE 136
+Q+K++EA+ LA ++ VV++ ++ R T GPG VE
Sbjct: 42 VQSKIDEAIGLAQAIRLD------------------VVEHHTVTMNTLRPATLLGPGKVE 83
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
I E K E+D ++ L+ +QQRNLE+ W V+DR LI+EIF A TKE
Sbjct: 84 EFSRII---EDK-EIDLAIIDRGLTPVQQRNLEKFWNCKVIDRTALILEIFGDRAATKEG 139
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 140 VLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIES 182
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR++ ++ + +++ V +TRA+ RA R++ +A+VGYTNAGKSTL +
Sbjct: 183 DRRQLQDKIVRIKRELDTVVKTRALHRAKRKKTSHP------VIALVGYTNAGKSTLFNQ 236
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVE 375
L+ +++ + LFATLDP L+ + LP G+ V+LSDTVGFIS+LP L+ AF ATLEEV+E
Sbjct: 237 LTGANVLAKDMLFATLDPTLRRITLPHGQLVILSDTVGFISNLPTHLIAAFRATLEEVIE 296
Query: 376 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ADL++HV D + P+ H V +L+ +GV + ++ E+WNK D D+
Sbjct: 297 ADLILHVRDMSDPDHYIHAQDVRDILKSLGVDIDDHNHIFEIWNKTDLLDD 347
>gi|296284134|ref|ZP_06862132.1| GTPase [Citromicrobium bathyomarinum JL354]
Length = 440
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 179/308 (58%), Gaps = 36/308 (11%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
R T FG G VE I AE+ + I V+ L+ IQQR LE + V+DR GLI+
Sbjct: 53 RPATLFGAGQVEQIGTQAELAEA----ELIIVDGALTAIQQRTLEEKLARKVIDRTGLIL 108
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
EIF A T E +LQ ELA L Y+ SRLVR T E R GG G
Sbjct: 109 EIFGERAATAEGRLQVELAHLDYQASRLVR------SWTHLE-----------RQRGGYG 151
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
F+ G GET+++ RR I R + L +E+V++TRA+ R R R +A+VG
Sbjct: 152 FLGGPGETQIEADRRMIRTRMARLRRDLEQVKKTRALHRERRTRAP------WPVIALVG 205
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLV 363
YTNAGKST+ + L+ +D+ ++ LFATLDP ++++ LP+ K +LSDTVGFISDLP QLV
Sbjct: 206 YTNAGKSTIFNRLTGADVMAEDLLFATLDPTMRAISLPAVEKAILSDTVGFISDLPTQLV 265
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV------SEEKLKN--MI 415
AF ATLEEV ADL++HV D P +T VL+VL+ +GV EE + + M+
Sbjct: 266 AAFRATLEEVTNADLILHVRDIANPASAAQKTQVLEVLRGLGVVSGGEEGEEPVSSIPML 325
Query: 416 EVWNKIDY 423
EVWNK D
Sbjct: 326 EVWNKWDL 333
>gi|225852611|ref|YP_002732844.1| GTP-binding proten HflX [Brucella melitensis ATCC 23457]
gi|256263896|ref|ZP_05466428.1| GTP-binding protein [Brucella melitensis bv. 2 str. 63/9]
gi|265995027|ref|ZP_06107584.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|384211475|ref|YP_005600557.1| GTP-binding proten HflX [Brucella melitensis M5-90]
gi|384408583|ref|YP_005597204.1| GTP-binding proten HflX [Brucella melitensis M28]
gi|225640976|gb|ACO00890.1| GTP-binding proten HflX [Brucella melitensis ATCC 23457]
gi|262766140|gb|EEZ11929.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263094028|gb|EEZ17962.1| GTP-binding protein [Brucella melitensis bv. 2 str. 63/9]
gi|326409130|gb|ADZ66195.1| GTP-binding proten HflX [Brucella melitensis M28]
gi|326538838|gb|ADZ87053.1| GTP-binding proten HflX [Brucella melitensis M5-90]
Length = 472
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 194/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI-----------GLDIEHAEIAIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|384445169|ref|YP_005603888.1| GTP-binding proten HflX [Brucella melitensis NI]
gi|349743160|gb|AEQ08703.1| GTP-binding proten HflX [Brucella melitensis NI]
Length = 505
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 194/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G ++
Sbjct: 91 EARLEEAIGLARAI-----------GLDIEHAEIAIVTNP-------RPATLLGAGKAQS 132
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 133 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 188
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 189 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 231
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 232 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 283
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 284 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 343
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 344 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 395
>gi|261755076|ref|ZP_05998785.1| GTP-binding protein [Brucella suis bv. 3 str. 686]
gi|261744829|gb|EEY32755.1| GTP-binding protein [Brucella suis bv. 3 str. 686]
Length = 472
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 195/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A KE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARIKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|167646573|ref|YP_001684236.1| GTP-binding proten HflX [Caulobacter sp. K31]
gi|167349003|gb|ABZ71738.1| GTP-binding proten HflX [Caulobacter sp. K31]
Length = 446
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 203/362 (56%), Gaps = 52/362 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+ +L EA+ LA +L D D + + P +V P+ T FG G +E
Sbjct: 39 RVRLEEAVGLAIAL--------DLDVVETMVAPLRLV-TPA---------TLFGKGKIEE 80
Query: 138 IK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
C + ++D + L+ +QQRNLE+A V+DR GLI+EIF A T+E
Sbjct: 81 FAAICEVE------KIDVAVFDDQLTPVQQRNLEKALNVKVVDRTGLILEIFARRARTRE 134
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
KLQ ELA L Y++SRLVR T E R GG G G GET+++
Sbjct: 135 GKLQVELARLDYERSRLVRT------WTHLE-----------RQRGGTGNTGGPGETQIE 177
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
L RR I + L +++EVRRTR + R+ R++ TVA+VGYTNAGKSTL +
Sbjct: 178 LDRRLIRDNILKLKRELDEVRRTRTLHRSQRKKAP------YPTVALVGYTNAGKSTLFN 231
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
L+ + + + LFATLDP L++V LP G+ +LSDTVGFISDLP +LV+AF ATLEEV
Sbjct: 232 RLTHATVVAQDMLFATLDPTLRNVKLPDGRPAILSDTVGFISDLPHELVEAFRATLEEVQ 291
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYI 434
EAD+++HV D P+ + V VL ++ V+ E K +IEVWNKID D E E +
Sbjct: 292 EADVVLHVRDVANPDTDAQARDVQVVLAELKVTAEDGKTIIEVWNKIDLVDGEAR--EIL 349
Query: 435 DG 436
DG
Sbjct: 350 DG 351
>gi|261214104|ref|ZP_05928385.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260915711|gb|EEX82572.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 472
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 195/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
E DL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 ETDLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|254464339|ref|ZP_05077750.1| GTP-binding proten HflX [Rhodobacterales bacterium Y4I]
gi|206685247|gb|EDZ45729.1| GTP-binding proten HflX [Rhodobacterales bacterium Y4I]
Length = 423
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 231/425 (54%), Gaps = 59/425 (13%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + ++ KA A FG G +E + G E++ + ++ +S +QQRNLE+AW
Sbjct: 45 VVGSNVVRLPKAHAGMLFGSGKIE----ELAGILKANEIELVLIDGPVSPVQQRNLEKAW 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 101 KVKILDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRA------WTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I ++ L Q+++V +TR + RA+R +
Sbjct: 149 -----RQRGGLGFVGGPGETQIEADRRAIDDQLVRLRRQLDKVVKTRTLHRASRAKV--- 200
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
VA+VGYTNAGKSTL + L+ +++ + LFATLDP ++ V LP G +++LSDT
Sbjct: 201 ---PYPIVALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVELPDGPEIILSDT 257
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP +LV AF ATLEEV+ AD+++HV D + + ++ V +L +GV E ++
Sbjct: 258 VGFISNLPTELVAAFRATLEEVLAADVILHVRDISHHDSKQQAEDVEAILASLGVDENRV 317
Query: 412 KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTS--EPVDVECIDNYGGDDAD 469
+ IEVWNK+D EE + + RAE +D + E +D D A+
Sbjct: 318 R--IEVWNKLDQLPEEEAE---------ARRQRAEREDGIHAISALTGEGLDGLLADIAE 366
Query: 470 NNDGFVSED---LGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPESTKDVCVM 526
G E+ L + K WL ++D V++E +Q E+ DV V+
Sbjct: 367 KLQGVRHEEVLTLTFAQGKQR-----AWLF---KEDLVQQE-------KQTETGFDVTVL 411
Query: 527 EKDSQ 531
D Q
Sbjct: 412 WTDRQ 416
>gi|85374078|ref|YP_458140.1| GTPase [Erythrobacter litoralis HTCC2594]
gi|84787161|gb|ABC63343.1| GTPase [Erythrobacter litoralis HTCC2594]
Length = 433
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/338 (41%), Positives = 197/338 (58%), Gaps = 44/338 (13%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLER 170
V+++ L + + +T G G VE + C ++ E++ + ++ LS IQQRNLE
Sbjct: 44 VIESYILPIRQVQPNTLLGSGQVERVSTDCELH------EIELVVIDGALSPIQQRNLEE 97
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
+ + V+DR GLI+EIF A T E +LQ ELA L Y++SRLVR T E
Sbjct: 98 KFKRKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQQSRLVR------SWTHLE---- 147
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
R GG GF+ G GET+++ RR I +R L ++E+VR+TR + R R
Sbjct: 148 -------RQRGGFGFLGGPGETQIEADRRMIRQRMGRLRKELEQVRKTRGLHRERR---- 196
Query: 291 GSDGRG-LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLL 348
GR +A+VGYTNAGKSTL + L+ +++ ++ LFATLDP ++++ LP K +L
Sbjct: 197 ---GRAPWPVIALVGYTNAGKSTLFNRLTGAEVMAEDLLFATLDPTMRAIALPGVEKAIL 253
Query: 349 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 408
SDTVGFISDLP QLV AF ATLEEV ADL++HV D + ++ VL+VLQ +GV +
Sbjct: 254 SDTVGFISDLPTQLVAAFRATLEEVTAADLILHVRDIANSSSAAQKSQVLEVLQDLGVID 313
Query: 409 ----EKLKNMIEVWNKIDYHD----EEMGDVEYIDGDD 438
E ++EVWNK D D EE+ V +GDD
Sbjct: 314 GEDGESSIPILEVWNKWDLLDQDSAEELSGVA--EGDD 349
>gi|225174625|ref|ZP_03728623.1| GTP-binding proten HflX [Dethiobacter alkaliphilus AHT 1]
gi|225169752|gb|EEG78548.1| GTP-binding proten HflX [Dethiobacter alkaliphilus AHT 1]
Length = 425
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 176/304 (57%), Gaps = 34/304 (11%)
Query: 123 KARADTFF--GPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
+ R D+ F G G E I+ + E+ +L + + LS Q+RNLE A V+DR
Sbjct: 47 RQRPDSAFYVGKGKAEEIRLIVE--ETDAQL--VLFDDELSPSQRRNLEEAVAVRVVDRT 102
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
LI++IF A TKE KLQ ELA L Y RL TG +S G
Sbjct: 103 ALILDIFAQRAKTKEGKLQVELAQLHYLLPRL--------------TGMGVQLSRLAGGI 148
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
G RG GET+L++ RRRI +R S L +IEE+++ R + R AR+ L V
Sbjct: 149 GTRG----PGETKLEVDRRRIRKRISDLKKEIEEIKKHRTLHRKARQE------VPLPVV 198
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKV-LLSDTVGFISDLP 359
+VGYTNAGKSTL++AL+++D+F++ +LFATLDP + V LP G + LL+DTVGFI LP
Sbjct: 199 TLVGYTNAGKSTLLNALTNADVFAEDKLFATLDPTTRQVELPGGSMFLLTDTVGFIQKLP 258
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV AF ATLEEV+EADLL+HV+D + P E V +LQQ+G E I V+N
Sbjct: 259 HHLVAAFRATLEEVLEADLLLHVVDTSHPQAAEQMNAVQNILQQLGAQE---LPAIVVFN 315
Query: 420 KIDY 423
K+D
Sbjct: 316 KMDM 319
>gi|399075290|ref|ZP_10751476.1| GTP-binding protein HflX [Caulobacter sp. AP07]
gi|398039210|gb|EJL32350.1| GTP-binding protein HflX [Caulobacter sp. AP07]
Length = 446
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 149/361 (41%), Positives = 203/361 (56%), Gaps = 52/361 (14%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
A+L EA+ LA +L D + + + P +V P+ T FG G +E
Sbjct: 40 ARLEEAVGLALAL--------DLNVVETMIAPLRLV-TPA---------TLFGKGKIEEF 81
Query: 139 K--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
C + ++D + L+ +QQRNLERA V+DR GLI+EIF A T+E
Sbjct: 82 AALCEVE------KIDVAVFDDQLTPVQQRNLERALNVKVVDRTGLILEIFARRARTREG 135
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ ELA L Y++SRLVR T E R GG G G GET+++L
Sbjct: 136 KLQVELARLDYERSRLVRT------WTHLE-----------RQRGGTGNTGGPGETQIEL 178
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I + L +++EVRRTR + R+ R++ TVA+VGYTNAGKSTL +
Sbjct: 179 DRRLIRDNILKLKRELDEVRRTRTLHRSQRKKVP------YPTVALVGYTNAGKSTLFNR 232
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVE 375
L+ + + + LFATLDP L++V LP G+ +LSDTVGFISDLP +LV+AF ATLEEV E
Sbjct: 233 LTHATVVAQDMLFATLDPTLRNVKLPDGRPAILSDTVGFISDLPHELVEAFRATLEEVQE 292
Query: 376 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 435
AD+++HV D P+ + V VL ++ V+ E K ++EVWNKID D E E +D
Sbjct: 293 ADVVLHVRDVANPDTDAQARDVQAVLAELKVTTEDGKTILEVWNKIDLVDGEAR--EILD 350
Query: 436 G 436
G
Sbjct: 351 G 351
>gi|427411898|ref|ZP_18902100.1| GTP-binding protein HflX [Sphingobium yanoikuyae ATCC 51230]
gi|425710188|gb|EKU73211.1| GTP-binding protein HflX [Sphingobium yanoikuyae ATCC 51230]
Length = 443
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 181/311 (58%), Gaps = 38/311 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I +N E+ + + V+ L+ +QQ NLE+ G V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLVNQEEA----ELVIVDNALTPVQQSNLEKGTGAKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V +TR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTKTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL + L+ +++ ++ LFATLDP ++ +VLP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRLTGAEVMAEDLLFATLDPTMRQIVLPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN----------MIE 416
ATLEEV+ AD++VHV D P+ E R VL VL ++GV+ E +IE
Sbjct: 279 RATLEEVLSADIIVHVRDIAHPDTEAQRDDVLDVLSELGVAGEGALERGDGEADPPPIIE 338
Query: 417 VWNKIDYHDEE 427
WNK+D D E
Sbjct: 339 AWNKLDLLDAE 349
>gi|395786337|ref|ZP_10466064.1| GTP-binding protein HflX [Bartonella tamiae Th239]
gi|395422635|gb|EJF88831.1| GTP-binding protein HflX [Bartonella tamiae Th239]
Length = 456
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/351 (38%), Positives = 198/351 (56%), Gaps = 46/351 (13%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVE 136
+Q+K++EA+ LA ++ VV++ + R T GPG VE
Sbjct: 42 VQSKIDEAIGLAQAIRLD------------------VVEHHKVTMNTLRPATLLGPGKVE 83
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
I E K E+D ++ L+ +QQRNLE+ W V+DR LI+EIF A TKE
Sbjct: 84 EFSRII---EDK-EIDLAIIDRGLTPVQQRNLEKFWNCKVIDRTALILEIFGDRAATKEG 139
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 140 VLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIES 182
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR++ ++ + +++ V +TRA+ RA R++ +A+VGYTNAGKSTL +
Sbjct: 183 DRRQLQDKIVRIKRELDTVVKTRALHRAKRKKTSHP------VIALVGYTNAGKSTLFNQ 236
Query: 317 LSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVE 375
L+ +++ + LFATLDP L+ + LP G+ V+LSDTVGFIS+LP L+ AF ATLEEV+E
Sbjct: 237 LTGANVLAKDMLFATLDPTLRRITLPHGQLVILSDTVGFISNLPTHLIAAFRATLEEVIE 296
Query: 376 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ADL++HV D + P+ H V +L+ +GV + ++ E+WNK D D+
Sbjct: 297 ADLILHVRDMSDPDHYIHAQDVRDILKSLGVDIDDHNHIFEIWNKTDLLDD 347
>gi|306843975|ref|ZP_07476570.1| GTP-binding proten HflX [Brucella inopinata BO1]
gi|306275730|gb|EFM57454.1| GTP-binding proten HflX [Brucella inopinata BO1]
Length = 472
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 195/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+L DTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILLDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|23501988|ref|NP_698115.1| GTP-binding protein [Brucella suis 1330]
gi|376280782|ref|YP_005154788.1| GTP-binding protein [Brucella suis VBI22]
gi|384224776|ref|YP_005615940.1| GTP-binding protein [Brucella suis 1330]
gi|23347938|gb|AAN30030.1| GTP-binding protein, putative [Brucella suis 1330]
gi|343382956|gb|AEM18448.1| GTP-binding protein, putative [Brucella suis 1330]
gi|358258381|gb|AEU06116.1| GTP-binding protein, putative [Brucella suis VBI22]
Length = 472
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 195/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKI DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIGNLDE 362
>gi|398382998|ref|ZP_10541075.1| GTP-binding protein HflX [Sphingobium sp. AP49]
gi|397725708|gb|EJK86156.1| GTP-binding protein HflX [Sphingobium sp. AP49]
Length = 444
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 144/385 (37%), Positives = 206/385 (53%), Gaps = 59/385 (15%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I + ++ E + + V+ L+ +QQ NLE+ G V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLV----TQEEAELVIVDNALTPVQQSNLEKGTGAKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V +TR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTKTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL + L+ +++ ++ LFATLDP ++ +VLP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRLTGAEVMAEDLLFATLDPTMRQIVLPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN----------MIE 416
ATLEEV+ AD++VHV D P+ + R VL VL ++GV+ E +IE
Sbjct: 279 RATLEEVLSADIIVHVRDIAHPDTDAQRDDVLDVLSELGVAGEGALERADTDSDPPPIIE 338
Query: 417 VWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVS 476
WNK+D D+E + A ++ S DV I GD D +S
Sbjct: 339 AWNKLDLLDQE---------------AVALAREAASRRDDVVIISALTGDGVDGLQRAIS 383
Query: 477 EDL--GESMNKNHNDYSDG----WL 495
E L G +++ +DG WL
Sbjct: 384 ERLTQGATVHNLRLPIADGAGLAWL 408
>gi|148559818|ref|YP_001259032.1| GTP-binding proten HflX [Brucella ovis ATCC 25840]
gi|148371075|gb|ABQ61054.1| GTP-binding proten HflX [Brucella ovis ATCC 25840]
Length = 490
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 195/352 (55%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D D E+ +V NP R T G G ++
Sbjct: 76 EARLEEAIGLARAI--------DLDIEHAEI---AIVTNP-------RPATLLGAGKAQS 117
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 118 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 173
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 174 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 216
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V R RA+ R RR+ H VA+VGYTNAGKSTL +
Sbjct: 217 RRLLQEKILRIKRELETVVRPRALHRQKRRKVPH--------PIVALVGYTNAGKSTLFN 268
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 269 RMTGAQVLAEDMLFATLDPPLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 328
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 329 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 380
>gi|407800371|ref|ZP_11147233.1| hypothetical protein OCGS_2306 [Oceaniovalibus guishaninsula
JLT2003]
gi|407057600|gb|EKE43574.1| hypothetical protein OCGS_2306 [Oceaniovalibus guishaninsula
JLT2003]
Length = 416
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 179/301 (59%), Gaps = 30/301 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
+A FG G + +K I ++ + ++ +S +QQRNLE+ W VLDR GL
Sbjct: 48 RAHPGHLFGTGKLAELKARIEA----DDVGLVLIDGPVSPVQQRNLEKEWSVKVLDRTGL 103
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF+ A T+E LQ E+AAL Y+++RLVR T E R GG
Sbjct: 104 ILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQRGG 146
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
GF+ G GET+++ RR I ++ L Q+++V RTR + RAAR + VA+
Sbjct: 147 LGFVGGPGETQIEADRRAIDDQIVRLRKQLDKVVRTRELHRAARAKVP------YPIVAL 200
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQ 361
VGYTNAGKSTL + L+ +D+ + LFATLDP ++ + LPSG +++LSDTVGFISDLP Q
Sbjct: 201 VGYTNAGKSTLFNRLTGADVMAKDMLFATLDPTMRRIDLPSGAEIILSDTVGFISDLPTQ 260
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEEV+ ADL+VHV D P E V +L ++GV + + IEVWNK
Sbjct: 261 LVAAFRATLEEVLAADLIVHVRDIAHPETEAQARDVEAILTELGVDDATPR--IEVWNKA 318
Query: 422 D 422
D
Sbjct: 319 D 319
>gi|338707838|ref|YP_004662039.1| GTP-binding proten HflX [Zymomonas mobilis subsp. pomaceae ATCC
29192]
gi|336294642|gb|AEI37749.1| GTP-binding proten HflX [Zymomonas mobilis subsp. pomaceae ATCC
29192]
Length = 458
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 201/383 (52%), Gaps = 48/383 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + + +A T FG G V+ I A E+D + V+ L+ IQQRNLE A
Sbjct: 51 VVAKLAFRLRSPKAATLFGQGQVDQIVT----AAKDEEIDLVVVDGPLTPIQQRNLETAL 106
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A T E +LQ ELA L Y+ RLVR T E
Sbjct: 107 DVKVIDRTGLILEIFGARAATAEGRLQVELAHLDYQAGRLVR------SWTHLE------ 154
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L + +V RTR + RA R+R
Sbjct: 155 -----RQRGGFGFLGGPGETQIEADRRMIRDRMAKLRRDLAQVTRTRGLHRARRKRAP-- 207
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDT 351
+A+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ + LP K +LSDT
Sbjct: 208 ----WPVIALVGYTNAGKSTLFNRLTGADVMAKDLLFATLDPTMRQIELPGIDKAILSDT 263
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE--- 408
VGF+SDLP QLV AF ATLEEV ADL++HV D P+ + R V +VL ++G++
Sbjct: 264 VGFVSDLPTQLVAAFRATLEEVTAADLILHVRDIAQPDSDSERDDVERVLAEIGIAPVEE 323
Query: 409 --EKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 466
E +IE WNK D EE + + SR E DV I + G+
Sbjct: 324 GGEFAIPIIEAWNKSDLLSEEAHESLAAEA------SRRE---------DVALISAWTGE 368
Query: 467 DADNNDGFVSEDLGESMNKNHND 489
++ +SE L + H D
Sbjct: 369 GIESLRHLISERLSNAHRLRHID 391
>gi|150389993|ref|YP_001320042.1| HSR1-like GTP-binding protein [Alkaliphilus metalliredigens QYMF]
gi|149949855|gb|ABR48383.1| GTP-binding protein, HSR1-related [Alkaliphilus metalliredigens
QYMF]
Length = 429
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 169/303 (55%), Gaps = 40/303 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE IK + E+ D + N +LSG Q RN+E A V+DR LI++IF
Sbjct: 65 YIGKGKVEEIKVFCDSVEA----DMVIFNDVLSGSQIRNIEAAMDIDVIDRTTLILDIFA 120
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A KE KLQ ELA L Y+ RL G + +S +G G G RG
Sbjct: 121 QRAQAKEGKLQVELAQLKYRMPRL--------------KGLGKQMSKQGAGIGTRG---- 162
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE +L+ RR IL R + +++EV++ R VQRA R++ + VAVVGYTNA
Sbjct: 163 PGEKKLETDRRHILSRIHDIEQELKEVKQNREVQRAQRKKSE------IPIVAVVGYTNA 216
Query: 309 GKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLP 359
GKSTL++ L D ++F LFATLD L+ +V +L+DTVGF+S LP
Sbjct: 217 GKSTLMNRLLQMSETYQEDREVFVKDMLFATLDVSLRKLVFNEKLTFILTDTVGFVSKLP 276
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV+AF ATLEEV ADLL+HV+D + N E R T L VL +GV +K+ I+V+N
Sbjct: 277 HDLVNAFKATLEEVQYADLLLHVIDASNDNFEMQRKTTLGVLHDLGVQSKKI---IDVYN 333
Query: 420 KID 422
KID
Sbjct: 334 KID 336
>gi|114704562|ref|ZP_01437470.1| GTP binding protein-like [Fulvimarina pelagi HTCC2506]
gi|114539347|gb|EAU42467.1| GTP binding protein-like [Fulvimarina pelagi HTCC2506]
Length = 459
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 193/348 (55%), Gaps = 46/348 (13%)
Query: 79 AKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETI 138
AKL EAL LA +++ + D+ + P R T G G VE +
Sbjct: 49 AKLEEALGLAAAIQLE---IVDSGIITQRAP---------------RPATLIGQGKVEEL 90
Query: 139 KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKL 198
K G E+ + ++ L+ +QQRNLER VLDR LI+EIF A TKE +L
Sbjct: 91 K----GVVVAEEIGLVIIDHPLTPVQQRNLERELNAKVLDRTALILEIFGERARTKEGRL 146
Query: 199 QAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQR 258
Q ELA L Y++ RLVR T E R GG GF+ G GET+++ R
Sbjct: 147 QVELAHLNYQRGRLVR------SWTHLE-----------RQRGGAGFLGGPGETQIEADR 189
Query: 259 RRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS 318
R++ + L ++E+VR TR + RA RR+ R VA+VGYTNAGKSTL + ++
Sbjct: 190 RQLQSKIKALEVELEKVRSTRQLHRAKRRK------RPHPIVALVGYTNAGKSTLFNRMT 243
Query: 319 DSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEAD 377
+D+F+ LFATLDP ++ L G ++L SDTVGFIS+LP LV AF ATLEEV+EAD
Sbjct: 244 GADVFAQNLLFATLDPTMRRTTLAHGTEILFSDTVGFISELPTHLVAAFRATLEEVIEAD 303
Query: 378 LLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
+++H+ D + P+ V Q+L+ + + + +++EVWNKID D
Sbjct: 304 IILHIRDVSDPDSLAQAEDVRQILRDLEIDADDTDHVVEVWNKIDRVD 351
>gi|374854026|dbj|BAL56919.1| small GTP-binding protein [uncultured prokaryote]
Length = 441
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 172/303 (56%), Gaps = 35/303 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPV--LDRVGLIIE 185
T+ GPG VE IK + + + + + LS QQRNLE A+G V LDR LI++
Sbjct: 56 TYIGPGKVEEIKALVRAMHA----NMVIFDDELSPSQQRNLENAFGDEVRVLDRTALILD 111
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF HAHT+E LQ ELA Y+ RL R + ++ + GS GRG
Sbjct: 112 IFAQHAHTREGALQVELAQYEYRLPRLTR--------------RWQNLAQQAGGSFGRGG 157
Query: 246 ISGAG-----ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
ISG G E +L++ RRRI +R +HL ++EEVR R R + V
Sbjct: 158 ISGVGLRGPGEKQLEIDRRRIKDRIAHLKRELEEVRAHRQRYRER------RRRAQVPVV 211
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKV-LLSDTVGFISDLP 359
A+VGYTNAGKSTL++A+S + + +LFATLDP + V LP G V L +DTVGFI LP
Sbjct: 212 ALVGYTNAGKSTLLNAVSGASVLVADQLFATLDPTTRRVKLPEGGVALFTDTVGFIQKLP 271
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV AF ATLEE+ EADL++HVLD T PN + V+Q L+++GV + MI N
Sbjct: 272 HPLVAAFRATLEEINEADLIIHVLDITHPNALQQARVVIQTLREIGVHD---IPMITALN 328
Query: 420 KID 422
KID
Sbjct: 329 KID 331
>gi|381203275|ref|ZP_09910382.1| GTP-binding protein HflX [Sphingobium yanoikuyae XLDN2-5]
Length = 443
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 180/311 (57%), Gaps = 38/311 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I +N E+ + + V+ L+ +QQ NLE G V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLVNQEEA----ELVIVDNALTPVQQSNLEEGTGAKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V +TR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTKTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL + L+ +++ ++ LFATLDP ++ +VLP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRLTGAEVMAEDLLFATLDPTMRQIVLPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN----------MIE 416
ATLEEV+ AD++VHV D P+ E R VL VL ++GV+ E +IE
Sbjct: 279 RATLEEVLSADIIVHVRDIAHPDTEAQRDDVLDVLSELGVAGEGALERGDGEADPPPIIE 338
Query: 417 VWNKIDYHDEE 427
WNK+D D E
Sbjct: 339 AWNKLDLLDTE 349
>gi|260565630|ref|ZP_05836114.1| GTP1/OBG [Brucella melitensis bv. 1 str. 16M]
gi|265991191|ref|ZP_06103748.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|260151698|gb|EEW86792.1| GTP1/OBG [Brucella melitensis bv. 1 str. 16M]
gi|263001975|gb|EEZ14550.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 472
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 140/352 (39%), Positives = 193/352 (54%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G ++
Sbjct: 58 EARLEEAIGLARAI-----------GLDIEHAEIAIVTNP-------RPATLLGAGKAQS 99
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 100 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 155
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 156 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 198
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKS L +
Sbjct: 199 RRLLQEKILRIKRELETVVRTRALHRQTRRKVPH--------PIVALVGYTNAGKSMLFN 250
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 251 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 310
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 311 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 362
>gi|17987156|ref|NP_539790.1| GTP-binding protein HflX [Brucella melitensis bv. 1 str. 16M]
gi|17982822|gb|AAL52054.1| gtp-binding protein hflx [Brucella melitensis bv. 1 str. 16M]
Length = 505
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 140/352 (39%), Positives = 193/352 (54%), Gaps = 50/352 (14%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ LA ++ D E +V NP R T G G ++
Sbjct: 91 EARLEEAIGLARAIG-----------LDIEHAEIAIVTNP-------RPATLLGAGKAQS 132
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
I + + + + V+ L+ +QQRNLE+ W V+DR GLI+EIF A TKE
Sbjct: 133 IAEVVK----EKAIGLVVVDHALTPVQQRNLEKEWNAKVIDRTGLILEIFGERARTKEGA 188
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+K RLVR T E R GG GF+ G GET+++
Sbjct: 189 LQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLGGPGETQIEAD 231
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRR--HGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR + E+ + ++E V RTRA+ R RR+ H VA+VGYTNAGKS L +
Sbjct: 232 RRLLQEKILRIKRELETVVRTRALHRQTRRKVPH--------PIVALVGYTNAGKSMLFN 283
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVV 374
++ + + ++ LFATLDP L+ + LP G+ V+LSDTVGFIS+LP LV AF ATLEEVV
Sbjct: 284 RMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNLPHHLVAAFRATLEEVV 343
Query: 375 EADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
EADL++HV D + P+ V +L +G+ + ++EVWNKID DE
Sbjct: 344 EADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVWNKIDNLDE 395
>gi|452750887|ref|ZP_21950634.1| GTP-binding protein HflX [alpha proteobacterium JLT2015]
gi|451962081|gb|EMD84490.1| GTP-binding protein HflX [alpha proteobacterium JLT2015]
Length = 414
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 139/346 (40%), Positives = 197/346 (56%), Gaps = 46/346 (13%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVET 137
+A+L EA+ L+ ++ D DK++ V V+ P R T FG G VE
Sbjct: 15 EARLEEAVALSAAIS--------LDVADKDI---VRVRAP-------RPATLFGSGQVEM 56
Query: 138 IKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAK 197
+ +++ + I V+ LS +QQRNLE+ G+ V+DR GLI+EIF A T E +
Sbjct: 57 LTARAEASDA----ELIVVDGALSPLQQRNLEKETGRKVIDRTGLILEIFGERAATHEGR 112
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQ 257
LQ ELA L Y+ SRLVR T E R GG GF+ G GET+++
Sbjct: 113 LQVELAHLEYQASRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIETD 155
Query: 258 RRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSAL 317
RR I +R + + ++E+V RTR + R R++ VA+VGYTNAGKSTL + L
Sbjct: 156 RRLIRDRMAKIRRELEQVTRTRTLHRERRQKAP------YPIVALVGYTNAGKSTLFNRL 209
Query: 318 SDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFHATLEEVVEA 376
+ + + + LFATLDP ++S+ +P KV++SDTVGF+SDLP QLV AF ATLEEV+EA
Sbjct: 210 TGATVMAKDLLFATLDPTMRSISIPGFDKVIMSDTVGFVSDLPTQLVAAFRATLEEVLEA 269
Query: 377 DLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
DL+VHV D P+ + V++ L +GV +++V NKID
Sbjct: 270 DLIVHVRDVAHPDTDAQAADVMRTLADLGVEPGGDVPILDVLNKID 315
>gi|357032721|ref|ZP_09094656.1| GTP-binding proten HflX [Gluconobacter morbifer G707]
gi|356413712|gb|EHH67364.1| GTP-binding proten HflX [Gluconobacter morbifer G707]
Length = 435
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 205/363 (56%), Gaps = 44/363 (12%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLE 169
V+V+ ++ R T G G VE + ++G +D + ++A LS QQRNLE
Sbjct: 48 VIVRKAAILLRARRPSTLLGSGQVEQLAEAVKLDG------VDVVIIDARLSPGQQRNLE 101
Query: 170 RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGE 229
+A G V+DR GLI++IF A A T+E LQ ELA L Y++SRLVR+ T E
Sbjct: 102 KALGCKVVDRTGLILDIFGARAATREGVLQVELAHLEYQRSRLVRL------WTHLE--- 152
Query: 230 AEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
R GG GF+ G GET+++ RR + ER + ++E+VRRTR + R AR+R
Sbjct: 153 --------RQRGGFGFLGGPGETQMEADRRMLAERIGKIKKELEQVRRTRGLHRDARKRV 204
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLL 348
VA+VGYTNAGKSTL +AL+ + + ++ +LFATLDP ++++ LPSG+ V+L
Sbjct: 205 ------PFPVVALVGYTNAGKSTLFNALTGASVQAENQLFATLDPTMRALRLPSGRNVIL 258
Query: 349 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV---G 405
SDTVGFIS+LP +LV AF ATLEEV +AD+++HV D P+ R VL VL + G
Sbjct: 259 SDTVGFISELPTELVAAFRATLEEVSQADVILHVRDVAHPDSAAQRADVLHVLDSMVRDG 318
Query: 406 VSEEKL-KNMIEVWNKIDY--------HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
+ + + + IEV NK D E + I G+ I + A D+ T D
Sbjct: 319 MLDAQWPERTIEVLNKADLVGGVQAIPKRENAVAISAITGEGIPDLFEALDQYLTRSMQD 378
Query: 457 VEC 459
V
Sbjct: 379 VRV 381
>gi|90419640|ref|ZP_01227550.1| GTP-binding protein HflX [Aurantimonas manganoxydans SI85-9A1]
gi|90336577|gb|EAS50318.1| GTP-binding protein HflX [Aurantimonas manganoxydans SI85-9A1]
Length = 406
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 183/315 (58%), Gaps = 28/315 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + + + R T G G VE +K I G E + + + L+ +QQRNLER
Sbjct: 11 IVASGVVSGQRPRPATLIGTGKVEEMKGVIAGEE----IGLVVFDHPLTPVQQRNLEREL 66
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDR GLI+EIF A TKE +LQ ELA L Y++ RLVR T E
Sbjct: 67 NVKVLDRTGLILEIFGERARTKEGRLQVELAHLNYQRGRLVR------SWTHLE------ 114
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR++ E+ L +E+VRRTR + RA R++
Sbjct: 115 -----RQRGGAGFLGGPGETQIESDRRQLQEKIKRLEKDLEQVRRTRQLHRAQRKKAPHP 169
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
VA+VGYTNAGKSTL + L+ +++ + LFATLDP L+ LP G ++L SDT
Sbjct: 170 ------VVALVGYTNAGKSTLFNRLTGAEVMAKDLLFATLDPTLRRTTLPHGTEILFSDT 223
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+SDLP LV AF ATLEEV+EAD+++HV D P+ V ++L+ + + +
Sbjct: 224 VGFVSDLPTHLVAAFRATLEEVIEADIVLHVRDVADPDTLAQAEDVRKILRDLDIDVDDS 283
Query: 412 KNMIEVWNKIDYHDE 426
+++E+WNK+D DE
Sbjct: 284 DHVVEIWNKVDLLDE 298
>gi|302840241|ref|XP_002951676.1| hypothetical protein VOLCADRAFT_105192 [Volvox carteri f.
nagariensis]
gi|300262924|gb|EFJ47127.1| hypothetical protein VOLCADRAFT_105192 [Volvox carteri f.
nagariensis]
Length = 1885
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 165/295 (55%), Gaps = 63/295 (21%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+F+N +L+ +Q+RN+E A G+PV+DRV ELA+L Y RLV
Sbjct: 749 VFINEVLTALQERNIELALGRPVVDRV--------------------ELASLSYMLPRLV 788
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGET--------------------E 253
R+RG DGR A G G+G G +S G E
Sbjct: 789 RMRGADGRR-----------GAFGVGAGWGGIMSDMGPAPQVSRPPPGGLGGGGGSGDPE 837
Query: 254 LQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTL 313
L+ QR RI +R S L ++++ V +R VQR RR GL TVA+VGYTN GK++L
Sbjct: 838 LRQQRFRIKQRLSTLRAELKAVAASRGVQRQGRR------AAGLPTVAIVGYTNVGKTSL 891
Query: 314 VSALSDSDLFSDA---RLFATLDPRLKSVVLPS--GKVLLSDTVGFISDLPLQLVDAFHA 368
A+ D LFATLDP ++ V LP+ V +SDTVGFI DLP+ LV AF A
Sbjct: 892 AGAMCSRDAGLPPPTDMLFATLDPAVRRVWLPTRGSHVAVSDTVGFIRDLPVGLVAAFRA 951
Query: 369 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK-NMIEVWNKID 422
TLEEVV AD+L+HVLD ++PN+ + R TVL VL+Q+GVSE+ L IEVWNK+D
Sbjct: 952 TLEEVVAADMLLHVLDASSPNVAQQRDTVLAVLRQLGVSEKVLTCRTIEVWNKVD 1006
>gi|393724841|ref|ZP_10344768.1| HSR1-like GTP-binding protein [Sphingomonas sp. PAMC 26605]
Length = 428
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 149/384 (38%), Positives = 204/384 (53%), Gaps = 54/384 (14%)
Query: 50 VVTLFNRDPDDPPR---LFLVQPRLKPPTF-LQAKLNEALCLANSLEEQRDGYFDTDFFD 105
+ T F RD DD R +V P T +A+L E LA ++
Sbjct: 1 MTTGFERDRDDVARGAKAVVVYPDTGVSTRDAEARLAETAGLAMAI-------------- 46
Query: 106 KELPPHV-VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQ 164
HV VV ++K + T G G +E + + GE + + +A L+ +Q
Sbjct: 47 -----HVEVVDRVAIKVRTLQPSTLIGKGQLEALAATVR----MGEAELVVFDASLTPVQ 97
Query: 165 QRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTF 224
QRNLE+A V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T
Sbjct: 98 QRNLEKALSAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTH 151
Query: 225 GETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRA 284
E R GG GF+ G GET+++ RR I +R + L ++E+V RTR + R
Sbjct: 152 LE-----------RQRGGFGFLGGPGETQIEADRRLIRDRMARLKKELEQVSRTRGLHRD 200
Query: 285 ARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS- 343
R+R +A+VGYTNAGKSTL + ++ +D+ ++ LFATLDP L+ + LP
Sbjct: 201 RRQRAPWP------VIALVGYTNAGKSTLFNRMTGADVMAEDLLFATLDPTLRQIALPGI 254
Query: 344 GKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 403
K +LSDTVGF+S+LP QLV AF ATLEEVV ADLL+HV D P+ R V VL+
Sbjct: 255 DKAILSDTVGFVSELPTQLVAAFKATLEEVVSADLLIHVRDIAHPDTLVQRDDVETVLRD 314
Query: 404 VGVSEEKLKNMIEVWNKIDYHDEE 427
+GV + IE WNK+D D++
Sbjct: 315 IGVDTSVPR--IEAWNKLDLLDDD 336
>gi|346992860|ref|ZP_08860932.1| GTP-binding protein HflX [Ruegeria sp. TW15]
Length = 423
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/318 (41%), Positives = 191/318 (60%), Gaps = 34/318 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETI--KCHINGAESKGELDAIFVNAILSGIQQRNLER 170
VV + ++ +A+A FG G +E + + H N E++ + ++ ++ +QQRNLE+
Sbjct: 45 VVGSEVVRLQRAQAGLLFGSGKIEELGERFHEN------EVELVLIDGPVTPVQQRNLEK 98
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
AW +LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 99 AWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE---- 148
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAAR +
Sbjct: 149 -------RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLQKVVKTRTLHRAARAKV- 200
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLS 349
VA+VGYTNAGKSTL + L+ + + + LFATLDP ++ V LP G +V+LS
Sbjct: 201 -----PYPIVALVGYTNAGKSTLFNGLTGAKVMARDMLFATLDPTMRRVELPDGPEVILS 255
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGFIS+LP +LV AF ATLEEV+ ADL+VH+ D + E V +L +GV ++
Sbjct: 256 DTVGFISNLPTELVAAFRATLEEVLGADLVVHLRDISHEETEAQAQDVETILTSLGVEDD 315
Query: 410 KLKNMIEVWNKIDYHDEE 427
+ + +EVWNKID E
Sbjct: 316 RPR--LEVWNKIDLLSSE 331
>gi|189218239|ref|YP_001938881.1| GTP-binding protein protease modulator [Methylacidiphilum
infernorum V4]
gi|189185097|gb|ACD82282.1| GTP-binding protein protease modulator [Methylacidiphilum
infernorum V4]
Length = 432
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 175/314 (55%), Gaps = 36/314 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLE 169
V+V+ K A + G G + I C + ++ + N LS IQ RNL
Sbjct: 42 VIVERLVQKMSSPTAPYYIGKGKAKEIAEICR------QKKVSFVLFNEELSPIQCRNLS 95
Query: 170 RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGE 229
+G VLDR LI++IF A T+E KLQ ELA L+Y RL R+
Sbjct: 96 SLFGCKVLDRTQLILDIFAQRAKTREGKLQIELAQLLYLLPRLTRLW------------- 142
Query: 230 AEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
+ R +GG G G GET+L++ RRRILE+ L ++EEV++TR +QR++R++
Sbjct: 143 ----THLSRQTGGIG-TRGPGETQLEVDRRRILEKIHRLKKELEEVKKTRFIQRSSRQKF 197
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLL 348
T +VGYTNAGKSTL + L+++ + + +LFATLDP ++ G K+ L
Sbjct: 198 P------WPTACLVGYTNAGKSTLFNRLTNAHVLVEDKLFATLDPTIRLFEFSGGYKIFL 251
Query: 349 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 408
SDTVGFI LP L+++F ATLEEV EADLL+H++D + P E V +VL+Q+G
Sbjct: 252 SDTVGFIQKLPHHLIESFKATLEEVTEADLLIHLVDVSHPWAETQINEVNKVLEQIGAIH 311
Query: 409 EKLKNMIEVWNKID 422
K I VWNKID
Sbjct: 312 ---KPTILVWNKID 322
>gi|354582787|ref|ZP_09001688.1| GTP-binding proten HflX [Paenibacillus lactis 154]
gi|353199079|gb|EHB64545.1| GTP-binding proten HflX [Paenibacillus lactis 154]
Length = 428
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 185/325 (56%), Gaps = 33/325 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE ++ ++G G AIF + LSG Q RNLE A ++DR LI++IF
Sbjct: 67 FIGKGKVEELRMAVDGL---GATTAIF-DQELSGAQVRNLEEALDVKIIDRTQLILDIFA 122
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E +Q ELA L Y RL +G + +S G G G RG
Sbjct: 123 QRAKTREGIIQVELAQLTYLLPRL--------------SGHGKNLSRLGAGIGTRG---- 164
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I +R S L Q++EV R R + R R++ G VA+VGYTNA
Sbjct: 165 PGETKLETDRRHIRDRISDLKRQLDEVTRHRNLHRERRKKSGA------VQVALVGYTNA 218
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ L+++D++ + +LFATLDP + + LPSGK V+L+DTVGFI +LP LV AF
Sbjct: 219 GKSTLLNRLTNADVYIENQLFATLDPTSRVLELPSGKEVVLTDTVGFIQNLPHDLVAAFR 278
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
ATLEE EADL++HV+D ++ EE V +L+ +G ++ K I ++NK D E
Sbjct: 279 ATLEEANEADLILHVVDASSTMREEQMAVVQSILEDLGAAD---KPQIVLFNKKDACQPE 335
Query: 428 MGDVEYIDGDDISNFSRAEDKDTTS 452
++ GD S +D+D TS
Sbjct: 336 QLEM-LPSGDGYLKISAYDDEDLTS 359
>gi|326791286|ref|YP_004309107.1| GTP-binding proten HflX [Clostridium lentocellum DSM 5427]
gi|326542050|gb|ADZ83909.1| GTP-binding proten HflX [Clostridium lentocellum DSM 5427]
Length = 418
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/302 (39%), Positives = 176/302 (58%), Gaps = 36/302 (11%)
Query: 129 FFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
+ G G VE IK ++GA I + LS IQ RNL A V+DR +I++I
Sbjct: 60 YIGSGKVEEIKEMAQLHGA------TGIVFDDELSPIQMRNLAEALQIKVMDRTMVILDI 113
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F + A +KE KLQ E+A L Y+ SRL+ G ++S + G G RG
Sbjct: 114 FASRALSKEGKLQVEMAQLKYQSSRLI--------------GFGTMLSRQAGGIGSRG-- 157
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GE +L+L +R + R L +++ EV + R + R+ R D VA+VGYT
Sbjct: 158 --PGEKKLELDKRHLKVRMEILQAELAEVEKHRQLIRSRR------DKNNTPVVAIVGYT 209
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDA 365
NAGKSTL++ LS SD++ +LFATLDP + + LPSG ++LL+DTVGFI LP LV A
Sbjct: 210 NAGKSTLLNQLSGSDVYVQNQLFATLDPTTRGITLPSGSEILLTDTVGFIRKLPHHLVKA 269
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
F++TLEE AD+++HV+D ++P+LE H+ V + L ++ +S+ + + V+NKID H
Sbjct: 270 FYSTLEEAKYADIILHVMDVSSPHLETHQQVVYETLSRLQISDIPI---VAVYNKIDTHV 326
Query: 426 EE 427
E+
Sbjct: 327 ED 328
>gi|347758039|ref|YP_004865601.1| GTP-binding proten HflX [Micavibrio aeruginosavorus ARL-13]
gi|347590557|gb|AEP09599.1| GTP-binding proten HflX [Micavibrio aeruginosavorus ARL-13]
Length = 440
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 178/306 (58%), Gaps = 28/306 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K A FG GT E I + + D +FVN LS +QQRNLE+ W V+DR GL
Sbjct: 62 KIDAGALFGKGTREMIAAQVEVMKP----DVVFVNHALSPVQQRNLEQEWKVKVIDRTGL 117
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A A T+E K+Q +LAAL Y+KSRLV+ S R GG
Sbjct: 118 ILEIFGARAQTREGKIQVQLAALEYQKSRLVK-----------------SWSHLERQRGG 160
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G G GET+L++ RR + +R + L +E++ RTR +QR R + V++
Sbjct: 161 MGKTGGPGETQLEIDRRLVTDRITQLKRDLEQISRTRDLQRKGREK------VPFPVVSL 214
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQ 361
VGYTNAGKSTL + L+ +++F++ FATLDP ++ V L G +++L+DTVGFI+DLP
Sbjct: 215 VGYTNAGKSTLFNRLTGANVFAEDLPFATLDPTMRRVKLEDGNEIILADTVGFIADLPTH 274
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV +F ATLE+V AD+++HV D + + + V+ +L +G+ + ++EV NK+
Sbjct: 275 LVASFRATLEQVQYADVIIHVRDMSRHDRAAQKNDVVSILHDLGIEYASDRRVVEVLNKM 334
Query: 422 DYHDEE 427
D EE
Sbjct: 335 DAIAEE 340
>gi|328543916|ref|YP_004304025.1| GTP binding protein-like protein [Polymorphum gilvum SL003B-26A1]
gi|326413660|gb|ADZ70723.1| GTP binding protein-like protein [Polymorphum gilvum SL003B-26A1]
Length = 458
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 184/316 (58%), Gaps = 28/316 (8%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V +K R T G G VE + + E + V+ L+ IQQRNLERA
Sbjct: 72 IVAALIVKISAPRPATLLGTGKVEDLAAQVEAEEVD----VVVVDHALTPIQQRNLERAL 127
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A A TKE +LQ +LA L ++KSRLVR T E
Sbjct: 128 KTKVIDRTGLILEIFGARARTKEGRLQVDLAHLTWQKSRLVR------SWTHLE------ 175
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR+I ++ L ++++VRRTR + R R++
Sbjct: 176 -----RQRGGVGFMGGPGETQIEADRRQIQDKIMRLEKELDQVRRTRDLHRKKRKKIPQP 230
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKSTL + L+++ + + LFATLDP L+ + LP G+ V+LSDT
Sbjct: 231 ------VVALVGYTNAGKSTLFNRLTEAQVLAKDLLFATLDPTLRRIKLPHGREVILSDT 284
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP LV AF ATLEEV+EADL++HV D P+ + V + L+ +GV
Sbjct: 285 VGFISELPTHLVAAFRATLEEVLEADLILHVRDIAHPDTDAQAADVARTLEDLGVGPTTG 344
Query: 412 KNMIEVWNKIDYHDEE 427
++EVWNKID D E
Sbjct: 345 APIVEVWNKIDCLDAE 360
>gi|390169597|ref|ZP_10221531.1| GTP-binding protein HflX [Sphingobium indicum B90A]
gi|389587871|gb|EIM65932.1| GTP-binding protein HflX [Sphingobium indicum B90A]
Length = 443
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 205/384 (53%), Gaps = 58/384 (15%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I E+ + + V+ LS +QQ NLE+A V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLARMEEA----ELVIVDNALSPVQQSNLEKATETKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V +TR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTKTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL + ++ +D+ ++ LFATLDP ++ + LP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRMTGADVMAEDLLFATLDPTMRQIALPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL---------KNMIEV 417
ATLEEV+ ADL+VHV D P+ + R V+ VL ++G++ E +IE
Sbjct: 279 RATLEEVLSADLIVHVRDIAHPDSDAQRDDVMDVLGELGIAGEGAFEAGEGEEPPPIIEA 338
Query: 418 WNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE 477
WNK+D DE D + +R +T + DV + G+ D+ VS
Sbjct: 339 WNKLDLLDE-----------DAATLAR----ETAARRSDVVVLSALTGEGVDDLQRAVSA 383
Query: 478 DL--GESMNKNHNDYSDG----WL 495
L G +++ H +DG WL
Sbjct: 384 RLTAGAQVHRLHVPLADGAAMAWL 407
>gi|300023207|ref|YP_003755818.1| GTP-binding proten HflX [Hyphomicrobium denitrificans ATCC 51888]
gi|299525028|gb|ADJ23497.1| GTP-binding proten HflX [Hyphomicrobium denitrificans ATCC 51888]
Length = 467
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 191/346 (55%), Gaps = 47/346 (13%)
Query: 80 KLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIK 139
+L+EA+ LAN++ D D D + P + R T G G V+
Sbjct: 61 RLSEAVGLANAI--------DLDIIDSAIVPM----------SEPRPSTLLGSGKVD--- 99
Query: 140 CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQ 199
+ G ++ + V+ L+ +QQRNLE+AW V+DR GLI+EIF A A T+E LQ
Sbjct: 100 -ELGGRVRDLDIGLVVVDHALTPVQQRNLEKAWNTKVVDRTGLILEIFGARARTREGVLQ 158
Query: 200 AELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRR 259
ELA L Y+K RLVR T E R GG GF+ G GE +++L +R
Sbjct: 159 VELAHLSYQKGRLVRA------WTHLE-----------RQRGGGGFLGGPGEAQIELDKR 201
Query: 260 RILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSD 319
+ +R + +++V RTR + R RR+ VAVVGYTNAGKSTL + ++
Sbjct: 202 MLQDRIDAIKRDLKDVVRTRDLHRKGRRKV------PYPIVAVVGYTNAGKSTLFNKITG 255
Query: 320 SDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADL 378
+ + + ++FATLDP ++ V LPS +++LSDTVGFISDLP LV AF ATLEEVVEADL
Sbjct: 256 AGVVAMDQVFATLDPTMREVKLPSARRIILSDTVGFISDLPTSLVAAFRATLEEVVEADL 315
Query: 379 LVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI-EVWNKIDY 423
++HV D E V +VL ++G+ + I EVWNKID
Sbjct: 316 ILHVRDIAHEETEAQARDVEKVLSELGIDTLPVDGHIQEVWNKIDL 361
>gi|319786414|ref|YP_004145889.1| GTP-binding proten HflX [Pseudoxanthomonas suwonensis 11-1]
gi|317464926|gb|ADV26658.1| GTP-binding proten HflX [Pseudoxanthomonas suwonensis 11-1]
Length = 444
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 172/295 (58%), Gaps = 30/295 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E +K AE+ G D I VN LS +Q+RNLERA + V+DR GLI++IF
Sbjct: 55 TLIGSGKLEEVKA---AAEATGA-DLILVNHPLSPVQERNLERALQRRVVDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRARSHEGKLQVELAQLKHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRLEQLQKRLEKVEVQHTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +AL+ +D ++ +LFATLDP ++ + LP G V+L+DTVGF+ DLP +LV AF
Sbjct: 208 AGKSTLFNALTGADAYAADQLFATLDPTVRRISLPGGSVVLADTVGFVRDLPHELVAAFR 267
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL E EADLL+HV+D P EE V VL +VG E L ++ V+NKID
Sbjct: 268 STLSEAREADLLLHVVDAADPLREERIAQVDSVLSEVGAGE--LPQLL-VFNKID 319
>gi|223939697|ref|ZP_03631570.1| GTP-binding proten HflX [bacterium Ellin514]
gi|223891654|gb|EEF58142.1| GTP-binding proten HflX [bacterium Ellin514]
Length = 414
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 172/298 (57%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A TF G G + H E+D + + L+ Q RNLE+ + +LDR LI++
Sbjct: 47 AATFIGSGKAQEFARHC----VSNEVDTVIFDDELTPAQSRNLEQVFNCKILDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A TKE KLQ ELA L + RL R G R GG G
Sbjct: 103 IFAQRARTKEGKLQIELAQLQHLLPRLTRFWG-----------------HLSRQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RRR+ +R + + ++E VRR R+ QR R+R+ ++VGY
Sbjct: 145 MRGDGETQLETDRRRVQDRIARIARELEVVRRQRSTQRHGRQRNL------WPLASIVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVD 364
TNAGKSTL++A++ +D+ ++ +LFATLDP + + LP+ + VLL+DTVGFI LP LV+
Sbjct: 199 TNAGKSTLLNAVTGADVLAENKLFATLDPTTRRLRLPTNQNVLLTDTVGFIRKLPHNLVE 258
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATLEEVV+ADLL+HV+D ++P EE V VL ++G + K + V+NKID
Sbjct: 259 AFKATLEEVVQADLLIHVVDGSSPQAEEQIAAVNAVLDEIGAAG---KPTMMVFNKID 313
>gi|261406202|ref|YP_003242443.1| GTP-binding proten HflX [Paenibacillus sp. Y412MC10]
gi|261282665|gb|ACX64636.1| GTP-binding proten HflX [Paenibacillus sp. Y412MC10]
Length = 430
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/312 (41%), Positives = 179/312 (57%), Gaps = 36/312 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+ QN + K F G G VE ++ I+G G AIF + LSG Q RNLE +
Sbjct: 54 VITQNREVPDSKW----FIGKGKVEELRMAIDGL---GATTAIF-DQELSGAQVRNLEES 105
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI++IF A T+E +Q ELA L Y RL +G +
Sbjct: 106 LDVKIIDRTQLILDIFAQRAKTREGIIQVELAQLTYLLPRL--------------SGHGK 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+S G G G RG GE++L+ RR I +R S L Q++EV R R + R R++ G
Sbjct: 152 NLSRLGAGIGTRG----PGESKLETDRRHIRDRISDLKRQLDEVTRHRTLHRERRKKSGA 207
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
VA+VGYTNAGKSTL++ L+ +D++ + +LFATLDP + + LPSGK V+L+D
Sbjct: 208 ------VQVALVGYTNAGKSTLLNRLTAADVYIENQLFATLDPTSRVLELPSGKEVVLTD 261
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV AF ATLEE EADL++HV+D ++P +E V +LQ +G S+
Sbjct: 262 TVGFIQNLPHDLVAAFRATLEEANEADLILHVVDASSPMRDEQMAVVQSILQDLGASD-- 319
Query: 411 LKNMIEVWNKID 422
K I ++NK D
Sbjct: 320 -KPQIVLFNKKD 330
>gi|340028216|ref|ZP_08664279.1| small GTP-binding protein [Paracoccus sp. TRP]
Length = 435
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 224/449 (49%), Gaps = 71/449 (15%)
Query: 61 PPRLFLVQPRLKPPTFLQA---KLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNP 117
P R +++ P L +A L EA+ LA++L P V
Sbjct: 11 PTRAYVIHPDLGNARTRRAPELALEEAVALAHAL-----------------PAIEVTGAE 53
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
+ K F G E I H+ + + ++ ++ +QQRNLE+ WG +L
Sbjct: 54 VARLRKPDPGMLFSKGKREEIGAHLQAVADGEGAELVLIDGPVTPVQQRNLEKEWGVKIL 113
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI+EIF A T+E LQ ELAAL Y+++RLVR T E
Sbjct: 114 DRTGLILEIFADRARTREGVLQVELAALAYQRTRLVRA------WTHLE----------- 156
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG GF+ G GET+++ RR I E+ L Q+ V +TR + R AR +
Sbjct: 157 RQRGGLGFVGGPGETQIEADRRAIDEQVVRLRRQLSRVVKTRELHRKARAKV------PY 210
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
VA+VGYTNAGKSTL + L+ +++ + +LFATLDP ++ + LP +V+LSDTVGFIS
Sbjct: 211 PIVALVGYTNAGKSTLFNRLTGAEVVARDQLFATLDPTMRQLTLPGERRVILSDTVGFIS 270
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
DLP +LV AF ATLEEV+ ADL++HV D + EE V ++L +GV ++ +IE
Sbjct: 271 DLPHELVAAFRATLEEVLAADLILHVRDISHSETEEQAADVGEILDSLGVEDD--VPLIE 328
Query: 417 VWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVS 476
VWNKID +S+ R ++T + DV+ I G+ +
Sbjct: 329 VWNKIDA---------------LSSDIRQALQNTDARKQDVQAISALTGEGIPALLSAIE 373
Query: 477 EDLGESMNKNHND------YSDG----WL 495
L E++++ + +SDG WL
Sbjct: 374 AKLAEALDEPRREAERLLSHSDGRRRAWL 402
>gi|85708673|ref|ZP_01039739.1| GTPase [Erythrobacter sp. NAP1]
gi|85690207|gb|EAQ30210.1| GTPase [Erythrobacter sp. NAP1]
Length = 432
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 178/307 (57%), Gaps = 34/307 (11%)
Query: 127 DTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
+T FG G VE IK + E + + V+ L+ IQQRNLE + V+DR GLI+EI
Sbjct: 58 NTLFGSGQVENIKILCE----QHECELVIVDGALTPIQQRNLEDKLKRKVIDRTGLILEI 113
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A T E +LQ ELA L Y++SRLVR T E R GG GF+
Sbjct: 114 FGERAATAEGRLQVELAHLDYQQSRLVR------SWTHLE-----------RQRGGFGFL 156
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRG-LATVAVVGY 305
G GET+++ RR I +R L ++E+VR+TR + R R GR +A+VGY
Sbjct: 157 GGPGETQIEADRRMIRQRMGRLRRELEQVRKTRTLHRERR-------GRAPWPVIALVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ +++ ++ LFATLDP ++++ LP K +LSDTVGFISDLP QLV
Sbjct: 210 TNAGKSTLFNRLTGAEVMAEDLLFATLDPTMRAISLPGVEKAILSDTVGFISDLPTQLVA 269
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV----SEEKLKNMIEVWNK 420
AF ATLEEV AD++ HV D P + V++VL +GV S E ++EVWNK
Sbjct: 270 AFRATLEEVTGADIICHVRDMANPAHSAQKKQVMEVLSDLGVVDAESGESEIPILEVWNK 329
Query: 421 IDYHDEE 427
D E+
Sbjct: 330 ADLLSED 336
>gi|254876863|ref|ZP_05249573.1| protease, GTP-binding subunit [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842884|gb|EET21298.1| protease, GTP-binding subunit [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 435
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 186/312 (59%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+++ + F G G +E IK + E D + N LS Q+RN+E+
Sbjct: 43 VVLESLDFNHPEPDIKYFCGMGKMEMIK----NKRDELEADLVVFNHPLSPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECKIMDRTRLILEIFSLRAKTHEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL+++G+++
Sbjct: 256 TVGFIKNLPHDLVEAFHATLEEAIESDLLVHVIDYADEDYKSYIEQVEKVLKEIGIAD-- 313
Query: 411 LKNMIEVWNKID 422
K MI V+NKID
Sbjct: 314 -KEMICVYNKID 324
>gi|384261623|ref|YP_005416809.1| Small GTP-binding protein domain [Rhodospirillum photometricum DSM
122]
gi|378402723|emb|CCG07839.1| Small GTP-binding protein domain [Rhodospirillum photometricum DSM
122]
Length = 438
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 176/301 (58%), Gaps = 31/301 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G VE IK + + + + V+ L+ IQQRNLER W V+DR GLI+EIF
Sbjct: 65 TCLGGGAVERIKEEVE----RESIALVVVDTQLTPIQQRNLEREWACKVIDRTGLILEIF 120
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E KLQ ELA L Y++SRLVR T E R GG GF+
Sbjct: 121 GERARTAEGKLQVELAHLTYQRSRLVR------SWTHLE-----------RQRGGSGFLG 163
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++L RR I +R L ++EEVRRTR + R AR+R VA+VGYTN
Sbjct: 164 GPGETQIELDRRLIDDRIVRLKRELEEVRRTRGLHREARKRV------PYPVVALVGYTN 217
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAF 366
AGKSTL + L+ + + LFATLDP ++++ LPSG KV+LSDTVGF+SDLP +LV AF
Sbjct: 218 AGKSTLFNQLTAGGVLAKDMLFATLDPTMRALDLPSGRKVILSDTVGFVSDLPHELVAAF 277
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEEV AD++VHV D + E + V VL+ + + E + +E NK D D
Sbjct: 278 RATLEEVQAADVIVHVRDIAGLDTEAQKADVEDVLRGMDLEE---RQPLEALNKADCLDP 334
Query: 427 E 427
E
Sbjct: 335 E 335
>gi|329957488|ref|ZP_08297963.1| GTP-binding protein HflX [Bacteroides clarus YIT 12056]
gi|328522365|gb|EGF49474.1| GTP-binding protein HflX [Bacteroides clarus YIT 12056]
Length = 419
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 185/334 (55%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLDQANSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R L VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------LIRVALVGYTNVGKSTLMTLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVIIENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G S K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLADIGASG---KPMILVFNKIDAY 339
>gi|383786050|ref|YP_005470619.1| GTP-binding protein HflX [Fervidobacterium pennivorans DSM 9078]
gi|383108897|gb|AFG34500.1| GTP-binding protein HflX [Fervidobacterium pennivorans DSM 9078]
Length = 423
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 200/370 (54%), Gaps = 56/370 (15%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E IK N E + +D + + ++ IQQRN+E P+LDR +I+EIF
Sbjct: 54 TYVGSGKLEKIK---NFCE-ENRIDVVIFDDEITPIQQRNIENILKVPILDRTQVILEIF 109
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ HA T E KLQ E+A L+Y+ RL G+ +S G G G RG
Sbjct: 110 SRHATTHEGKLQVEMAKLVYELPRL--------------RGKGLYLSNPGAGIGTRG--- 152
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET L+L +R++ +R S L ++ +++ R R +R G V++VGYTN
Sbjct: 153 -PGETALELDKRKVKQRISTLRKELAKLKLNRENARKSRLESG------YYLVSIVGYTN 205
Query: 308 AGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDA 365
AGKSTL+S++S + D+ +LF+TL+P ++ V LPSG+ L+ DTVGFIS LP LV+A
Sbjct: 206 AGKSTLLSSISGEKDIIVSDKLFSTLNPTIRKVKLPSGRSCLVGDTVGFISKLPHTLVEA 265
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID--- 422
FH+TLEE++ +DLL+ V+D + P ++ + VL+++G E K I V+NKID
Sbjct: 266 FHSTLEEILYSDLLLLVVDISDPFYKDKISASYSVLEEIGAHE---KPTILVFNKIDVLP 322
Query: 423 YHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDD--ADNNDGFVSEDLG 480
Y E+ EY G IS R G DD + D F S D+
Sbjct: 323 YDKLEIIKYEYPHGVFISAKQRK------------------GLDDLFSKMEDYFKSFDVR 364
Query: 481 ESMNKNHNDY 490
++ NH+DY
Sbjct: 365 MNLRINHSDY 374
>gi|395493250|ref|ZP_10424829.1| HSR1-like GTP-binding protein [Sphingomonas sp. PAMC 26617]
Length = 430
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 183/320 (57%), Gaps = 31/320 (9%)
Query: 108 LPPHV-VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
+ HV VV ++K + T G G +E + + AE+ + + +A L+ +QQR
Sbjct: 44 MAIHVEVVDRVAVKVRALQPATLIGKGQLEALAATVRMAEA----ELVVFDASLTPVQQR 99
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLE+A V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 100 NLEKALSAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE 153
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
R GG GF+ G GET+++ RR I +R + L ++E+V RTR + R R
Sbjct: 154 -----------RQRGGFGFLGGPGETQIEADRRLIRDRMARLKKELEQVSRTRGLHRDRR 202
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GK 345
+R +A+VGYTNAGKSTL + ++ +D+ ++ LFATLDP L+ + LP K
Sbjct: 203 QRAPWP------VIALVGYTNAGKSTLFNRMTGADVMAEDLLFATLDPTLRQIALPGIDK 256
Query: 346 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 405
+LSDTVGF+S+LP QLV AF ATLEEVV ADLL+HV D P+ + V VL+ +G
Sbjct: 257 AILSDTVGFVSELPTQLVAAFKATLEEVVSADLLIHVRDIAHPDTIAQKDDVEAVLRDIG 316
Query: 406 VSEEKLKNMIEVWNKIDYHD 425
V + IE WNK+D D
Sbjct: 317 VDASVPR--IEAWNKLDLLD 334
>gi|337755594|ref|YP_004648105.1| GTP-binding protein HflX [Francisella sp. TX077308]
gi|336447199|gb|AEI36505.1| GTP-binding protein HflX [Francisella sp. TX077308]
Length = 435
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 186/312 (59%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+++ + F G G +E IK + E D + N LS Q+RN+E+
Sbjct: 43 VVLESLDFNHPEPDIKYFCGMGKMEMIK----NKRDELEADLVVFNHPLSPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECKIMDRTRLILEIFSLRAKTHEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL+++G+++
Sbjct: 256 TVGFIKNLPHDLVEAFHATLEEAIESDLLVHVIDYADEDYKSYIEQVEKVLKEIGIAD-- 313
Query: 411 LKNMIEVWNKID 422
K MI V+NKID
Sbjct: 314 -KEMICVYNKID 324
>gi|418056278|ref|ZP_12694331.1| GTP-binding proten HflX [Hyphomicrobium denitrificans 1NES1]
gi|353209497|gb|EHB74900.1| GTP-binding proten HflX [Hyphomicrobium denitrificans 1NES1]
Length = 467
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 139/350 (39%), Positives = 195/350 (55%), Gaps = 49/350 (14%)
Query: 80 KLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIK 139
+L+EA+ LAN++E D D + P + R T G G V+ +
Sbjct: 61 RLSEAVGLANAIE--------LDIIDSAIVP----------MSEPRPSTLLGSGKVDELG 102
Query: 140 CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQ 199
+ + + + V+ L+ +QQRNLE+AW V+DR GLI+EIF A A T+E LQ
Sbjct: 103 QRVRDLD----IGLVVVDHALTPVQQRNLEKAWNTKVVDRTGLILEIFGARARTREGVLQ 158
Query: 200 AELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRR 259
ELA L Y+K RLVR T E R GG GF+ G GE +++L RR
Sbjct: 159 VELAHLSYQKGRLVRA------WTHLE-----------RQRGGGGFLGGPGEAQIELDRR 201
Query: 260 RILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSD 319
+ +R + + +V RTR + R RR+ VAVVGYTNAGKSTL + ++
Sbjct: 202 MLQDRIDAIKRDLADVVRTRDLHRKGRRKV------PYPIVAVVGYTNAGKSTLFNKITG 255
Query: 320 SDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADL 378
+ + + ++FATLDP ++ V LPS +++LSDTVGFISDLP LV AF ATLEEVVEADL
Sbjct: 256 AGVVAMDQVFATLDPTMREVKLPSARRIILSDTVGFISDLPTMLVAAFRATLEEVVEADL 315
Query: 379 LVHVLDCTAPNLEEHRTTVLQVLQQVGV-SEEKLKNMIEVWNKIDY--HD 425
++HV D E V +VL ++G+ + + +++EVWNKID HD
Sbjct: 316 ILHVRDIAHEETEAQARDVEKVLGELGIDTIQADGHILEVWNKIDLVSHD 365
>gi|218129169|ref|ZP_03457973.1| hypothetical protein BACEGG_00744 [Bacteroides eggerthii DSM 20697]
gi|317475145|ref|ZP_07934412.1| GTP-binding protein HflX [Bacteroides eggerthii 1_2_48FAA]
gi|217988547|gb|EEC54867.1| GTP-binding protein HflX [Bacteroides eggerthii DSM 20697]
gi|316908598|gb|EFV30285.1| GTP-binding protein HflX [Bacteroides eggerthii 1_2_48FAA]
Length = 418
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 185/334 (55%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELEFLAETAGAEVVKRFTQKLDQANSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R L VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------LIRVALVGYTNVGKSTLMTLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVIIENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G S K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLADIGASG---KPMILVFNKIDAY 339
>gi|421849533|ref|ZP_16282512.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus NBRC 101655]
gi|421852885|ref|ZP_16285568.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371459720|dbj|GAB27715.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus NBRC 101655]
gi|371478884|dbj|GAB30771.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 439
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 137/316 (43%), Positives = 192/316 (60%), Gaps = 32/316 (10%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ L R+ T G G V++++ A ++D + V+A LS QQRNLE
Sbjct: 51 VIVRKDVLLLRSRRSATLLGKGQVDSLRI----AVKADQVDVVVVDAKLSPAQQRNLETE 106
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR GLI++IF A A TKE LQ ELA L Y++SRLVR+ T E
Sbjct: 107 CGCKVIDRTGLILDIFGARAATKEGTLQVELAHLEYQRSRLVRL------WTHLE----- 155
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L +E+VRRTR + R AR+R
Sbjct: 156 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKKDLEQVRRTRGLHRQARKRV-- 207
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSD 350
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++++ LPSG +V+LSD
Sbjct: 208 ----PFPVVALVGYTNAGKSTLFNALTGATVYAQDQLFATLDPTMRAIDLPSGRRVILSD 263
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 406
TVGFISDLP +L+ AF ATLEEV EAD+++HV D P+ + VL VL+ + +
Sbjct: 264 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVAHPDSASQKKDVLGVLEGMAKDDML 323
Query: 407 SEEKLKNMIEVWNKID 422
++ + +IEV NK+D
Sbjct: 324 EQDWPERIIEVLNKVD 339
>gi|167627766|ref|YP_001678266.1| protease, GTP-binding subunit [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597767|gb|ABZ87765.1| protease, GTP-binding subunit [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 435
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 186/312 (59%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+++ + F G G +E IK + E D + N LS Q+RN+E+
Sbjct: 43 VVLESLDFNHPEPDIKYFCGMGKMEMIK----NKRDELEADLVVFNHPLSPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECKIMDRTRLILEIFSLRAKTHEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL+++G+++
Sbjct: 256 TVGFIKNLPHDLVEAFHATLEEAIESDLLVHVIDYADEDYKSYIGQVEKVLKEIGIAD-- 313
Query: 411 LKNMIEVWNKID 422
K MI V+NKID
Sbjct: 314 -KEMICVYNKID 324
>gi|254509743|ref|ZP_05121810.1| GTP-binding proten HflX [Rhodobacteraceae bacterium KLH11]
gi|221533454|gb|EEE36442.1| GTP-binding proten HflX [Rhodobacteraceae bacterium KLH11]
Length = 423
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 129/311 (41%), Positives = 191/311 (61%), Gaps = 30/311 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + ++ +A+A FG G +E + ++ E++ + ++ ++ +QQRNLE+AW
Sbjct: 45 VVGSEIVRLQRAQAGLLFGSGKIEELAERLH----DHEIELVLIDGPVTPVQQRNLEKAW 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR GLI+EIF+ A T+E LQ E+AAL Y+++RLVR T E
Sbjct: 101 KVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTRLVRA------WTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I E+ L Q+++V +TR + RAAR +
Sbjct: 149 -----RQRGGLGFVGGPGETQIEADRRAIDEQLVRLRRQLQKVVKTRTLHRAARAKV--- 200
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
VA+VGYTNAGKSTL ++L+ +++ + LFATLDP ++ V L G +V+LSDT
Sbjct: 201 ---PYPIVALVGYTNAGKSTLFNSLTGAEVMAKDMLFATLDPTMRRVELQDGPEVILSDT 257
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP +LV AF ATLEEV+ ADL+VHV D + + E V +L +GV +++
Sbjct: 258 VGFISNLPTELVAAFRATLEEVLGADLVVHVRDISHEDSEAQAQDVETILASLGVDDDRP 317
Query: 412 KNMIEVWNKID 422
+ +EVWNKID
Sbjct: 318 R--LEVWNKID 326
>gi|126731325|ref|ZP_01747132.1| GTP-binding protein HflX [Sagittula stellata E-37]
gi|126708236|gb|EBA07295.1| GTP-binding protein HflX [Sagittula stellata E-37]
Length = 396
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 201/354 (56%), Gaps = 45/354 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
FG G + +K I + E++ + V+ ++ +QQRNLER W +LDR GLI+EIF+
Sbjct: 34 LFGSGKISELKELI----LENEVELVLVDGPVTPVQQRNLEREWKVKLLDRTGLILEIFS 89
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E LQ E+AAL Y+++RLVR T E R GG GF+ G
Sbjct: 90 DRAATREGVLQVEMAALSYQRTRLVRA------WTHLE-----------RQRGGLGFVGG 132
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+++ RR I E+ L Q+E+V +TR + R AR + VA+VGYTNA
Sbjct: 133 PGETQIEADRRAIDEQLVRLRRQLEKVVKTRELHRKARAKV------PYPIVALVGYTNA 186
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ +++ + LFATLDP +++V LP+G V+LSDTVGFISDLP +LV AF
Sbjct: 187 GKSTLFNRLTGAEVMAKDMLFATLDPTMRAVRLPTGADVILSDTVGFISDLPTELVAAFR 246
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
ATLEEV+ AD++VHV D + P + V +L +GV E IE+WNKID
Sbjct: 247 ATLEEVLAADVIVHVRDISHPETDAQAEDVRTILDGLGVDEG--TPQIELWNKIDRLS-- 302
Query: 428 MGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGE 481
GDV+ ++ +RA D+D + + G+ D V+E LGE
Sbjct: 303 -GDVK------VATEARA-DRDA-----GIFAVSAVTGEGLDGFLDAVTEALGE 343
>gi|366090132|ref|ZP_09456498.1| GTP-binding protein [Lactobacillus acidipiscis KCTC 13900]
Length = 420
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 132/331 (39%), Positives = 186/331 (56%), Gaps = 41/331 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
++FG G + +K N AE+K E + + VN L+ Q RN+E G V+DR LI+EIF
Sbjct: 49 SYFGSGKLIELK---NAAEAK-EANDLIVNDELTPTQLRNIEDETGLTVIDRTALILEIF 104
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AHT+EAKLQ ++A+L Y RL R+R T + GS G GF S
Sbjct: 105 ARRAHTREAKLQVQIASLQY---RLPRLR----------TSSLNRFDQQTAGSSGGGFTS 151
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+++L RR I + +HL Q++EV + +R AR D G+ TVA+VGYT
Sbjct: 152 RGAGETQMELNRRTIQNQITHLRHQLKEVEQEEQTKRKAR------DSSGIKTVALVGYT 205
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
NAGKST ++ L + +F + LFATLD ++ V K +LLSDTVGF+S L
Sbjct: 206 NAGKSTTMNGLLRLTGEAKEKQVFEENMLFATLDTSVRKVQFDDNKEILLSDTVGFVSSL 265
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P QLV+AF TL E +ADLLV V+D + P+ +E T + L+++ V+ MI +
Sbjct: 266 PHQLVEAFKTTLAEAAQADLLVQVIDVSDPHAKEMIKTTEETLREIAVTGIP---MIYAF 322
Query: 419 NKIDYHDEEMGDVEY--IDGDDISNFSRAED 447
NK D + + Y I GD I+ +R +D
Sbjct: 323 NKADMEPQ----LRYPEIAGDQITYSARDDD 349
>gi|329114580|ref|ZP_08243339.1| GTP-binding protein HflX [Acetobacter pomorum DM001]
gi|326696060|gb|EGE47742.1| GTP-binding protein HflX [Acetobacter pomorum DM001]
Length = 439
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/316 (43%), Positives = 192/316 (60%), Gaps = 32/316 (10%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ L R+ T G G V++++ A ++D + V+A LS QQRNLE
Sbjct: 51 VIVRKDVLLLRSRRSATLLGKGQVDSLRI----AVKADQVDVVVVDAKLSPAQQRNLETE 106
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR GLI++IF A A TKE LQ ELA L Y++SRLVR+ T E
Sbjct: 107 CGCKVIDRTGLILDIFGARAATKEGTLQVELAHLEYQRSRLVRL------WTHLE----- 155
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L +E+VRRTR + R AR+R
Sbjct: 156 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKKDLEQVRRTRGLHRQARKRV-- 207
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSD 350
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++++ LPSG +V+LSD
Sbjct: 208 ----PFPVVALVGYTNAGKSTLFNALTGATVYAQDQLFATLDPTMRAIDLPSGRRVILSD 263
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG----V 406
TVGFISDLP +L+ AF ATLEEV EAD+++HV D P+ + VL VL+ + +
Sbjct: 264 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVAHPDSAAQKKDVLGVLEGMAKDDML 323
Query: 407 SEEKLKNMIEVWNKID 422
++ + +IEV NK+D
Sbjct: 324 EQDWPERIIEVLNKVD 339
>gi|393718426|ref|ZP_10338353.1| HSR1-like GTP-binding protein [Sphingomonas echinoides ATCC 14820]
Length = 428
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 183/320 (57%), Gaps = 31/320 (9%)
Query: 108 LPPHV-VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
+ HV VV ++K + T G G +E + + AE+ + + +A L+ +QQR
Sbjct: 44 MAIHVEVVDRVAIKVRALQPSTLIGKGQLEALAATVRMAEA----ELVVFDASLTPVQQR 99
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLE+A V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 100 NLEKALSAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE 153
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
R GG GF+ G GET+++ RR I +R + L ++E+V RTR + R R
Sbjct: 154 -----------RQRGGFGFLGGPGETQIEADRRLIRDRMARLKKELEQVSRTRGLHRDRR 202
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GK 345
+R +A+VGYTNAGKSTL + ++ +D+ ++ LFATLDP L+ + LP K
Sbjct: 203 QRAPWP------VIALVGYTNAGKSTLFNRMTGADVMAEDLLFATLDPTLRQIALPGIDK 256
Query: 346 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 405
+LSDTVGF+S+LP QLV AF ATLEEVV ADLL+HV D P+ + V VL+ +G
Sbjct: 257 AILSDTVGFVSELPTQLVAAFKATLEEVVSADLLIHVRDIAHPDTIAQKDDVEAVLRDIG 316
Query: 406 VSEEKLKNMIEVWNKIDYHD 425
V + IE WNK+D D
Sbjct: 317 VDLSVPR--IEAWNKLDMLD 334
>gi|195997495|ref|XP_002108616.1| hypothetical protein TRIADDRAFT_18641 [Trichoplax adhaerens]
gi|190589392|gb|EDV29414.1| hypothetical protein TRIADDRAFT_18641 [Trichoplax adhaerens]
Length = 436
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 180/298 (60%), Gaps = 29/298 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAI-LSGIQQRNLERAWGKPVLDRVGLIIEI 186
TFFG G + +N + K ++ A+F+N L Q++ L++ W PV DR G++++I
Sbjct: 66 TFFGKGKTGELCNLMNKLKQKHQVTAVFLNTTQLQANQRQTLQKLWSLPVYDRYGIVLQI 125
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F HA T+EAK+Q ELA+L Y +S+L +F T EA + RG +
Sbjct: 126 FKRHARTQEAKIQVELASLKYLRSQL----------SF--TVEAYDLD--------RGHL 165
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
AGE+ ++ RR + + L +++++R+ RA R R+R+ + TVAV+GYT
Sbjct: 166 GRAGESGQEIGRRALEYKYRQLSRKLKDIRQKRATVRLKRQRNE------IPTVAVLGYT 219
Query: 307 NAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVD 364
NAGK+TL+ AL+ + + +LFATLD + S L SG ++L DT+GFISDLP L++
Sbjct: 220 NAGKTTLIKALTGEKSMIPKDKLFATLDTTVYSGQLISGFQILYIDTIGFISDLPHDLLE 279
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+F ATLE+V+ ADLL+H+ D + P E+ + +VL VL+ + + L+NMIEV NKID
Sbjct: 280 SFSATLEDVINADLLLHIRDISHPETEKQKASVLNVLRDLYLPRTALENMIEVHNKID 337
>gi|315646583|ref|ZP_07899701.1| GTP-binding proten HflX [Paenibacillus vortex V453]
gi|315278226|gb|EFU41546.1| GTP-binding proten HflX [Paenibacillus vortex V453]
Length = 429
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 181/312 (58%), Gaps = 36/312 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+ QN + K F G G VE ++ I+G G AIF + LSG Q RNLE +
Sbjct: 54 VITQNREVPDSKW----FIGKGKVEELRMAIDGL---GATTAIF-DQELSGAQVRNLEES 105
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI++IF A T+E +Q ELA L Y RL +G +
Sbjct: 106 LDVKIIDRTQLILDIFAQRAKTREGIVQVELAQLTYLLPRL--------------SGHGK 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+S G G G RG GE++L+ RR I +R S L Q++E+ R R++ R R++ G
Sbjct: 152 NLSRLGAGIGTRG----PGESKLETDRRHIRDRISDLKRQLDEMTRHRSLHRERRKKSGA 207
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
VA+VGYTNAGKSTL++ L+ +D++ + +LFATLDP +++ LPSGK V+L+D
Sbjct: 208 ------VQVALVGYTNAGKSTLLNRLTAADVYIEDQLFATLDPTSRALELPSGKEVVLTD 261
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV AF ATLEE EADL++HV+D ++P +E V +LQ +G ++
Sbjct: 262 TVGFIQNLPHDLVAAFRATLEEANEADLILHVVDSSSPMRDEQMAVVHSILQDLGAAD-- 319
Query: 411 LKNMIEVWNKID 422
K I ++NK D
Sbjct: 320 -KPQIVLFNKKD 330
>gi|309792496|ref|ZP_07686960.1| GTP-binding proten HflX [Oscillochloris trichoides DG-6]
gi|308225484|gb|EFO79248.1| GTP-binding proten HflX [Oscillochloris trichoides DG6]
Length = 458
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 172/297 (57%), Gaps = 27/297 (9%)
Query: 129 FFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
F GPG V + AE + + A + + LS Q RNLE A VLDR LI++I
Sbjct: 84 FIGPGKVREV------AELREQCGAGLVIFDDELSPAQTRNLEEALQVGVLDRTALILDI 137
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F HA T E +LQ ELA Y RL R E + + G +GG +
Sbjct: 138 FAQHARTHEGRLQVELAQYNYMLPRLRRQ---------WSHLERQAGTGGGTSAGGVVGL 188
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+L++ RR I +R + L Q+ +V R R + R R+ G G+ VA+VGYT
Sbjct: 189 RGPGETQLEIDRRLIDQRIAWLKEQLADVHRHRELYRQRRK------GSGVPVVALVGYT 242
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDA 365
NAGKSTL++ALS +D+ + +LFATLDP + V LP +LL+DTVGFI LP QLV A
Sbjct: 243 NAGKSTLLNALSGADVLTQDQLFATLDPTTRQVTLPGNHHILLTDTVGFIQKLPTQLVAA 302
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
F ATLEE+ EADLL+HV+D T PN +EH TV + L+++GVS K + V NK+D
Sbjct: 303 FRATLEEINEADLLLHVVDLTHPNAQEHAQTVEKTLEELGVSR---KATLTVLNKVD 356
>gi|384914720|ref|ZP_10015472.1| putative GTPase [Methylacidiphilum fumariolicum SolV]
gi|384527337|emb|CCG91340.1| putative GTPase [Methylacidiphilum fumariolicum SolV]
Length = 441
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/270 (43%), Positives = 159/270 (58%), Gaps = 28/270 (10%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+ N LS IQ RNL +G VLDR LI++IF A T+E KLQ ELA L+Y RL
Sbjct: 80 VLFNDDLSPIQCRNLSSLFGCKVLDRTQLILDIFAQRAKTREGKLQIELAQLLYLLPRLT 139
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
R+ + R +GG G G GET+L++ RRRI E+ L ++E
Sbjct: 140 RLW-----------------THLSRQTGGIG-TRGPGETQLEVDRRRIQEKIHRLKKELE 181
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLD 333
EV++TR +QR+ R++ T +VGYTNAGKSTL + L++S + + +LFATLD
Sbjct: 182 EVKKTRFIQRSCRQKSS------WPTACLVGYTNAGKSTLFNLLTNSKVLVENKLFATLD 235
Query: 334 PRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEE 392
P ++ G K+ LSDTVGFI LP LV++F ATLEEV EADLL+H++D + P E
Sbjct: 236 PTIRLFEASGGQKIFLSDTVGFIQKLPFHLVESFKATLEEVKEADLLIHLVDISHPLSEN 295
Query: 393 HRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V +VL+Q+G + K I VWNKID
Sbjct: 296 QIEEVNKVLEQLGALD---KPTILVWNKID 322
>gi|20257541|gb|AAM15935.1| HflX-like protein [Gluconacetobacter diazotrophicus]
Length = 306
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/272 (45%), Positives = 169/272 (62%), Gaps = 28/272 (10%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ L R T G G VE+++ + + + + V++ LS +QQRNLERA
Sbjct: 51 VIVRQAVLVLRARRPSTLLGNGQVESLRAAVQ----QDRVAVVIVDSRLSPVQQRNLERA 106
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR LI++IF A TKE LQ ELA L Y++SRLVR T E
Sbjct: 107 LGCKVIDRTALILDIFGERAATKEGTLQVELAHLEYQRSRLVRT------WTHLE----- 155
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + RAARRR
Sbjct: 156 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKRELEQVRRTRGLHRAARRRV-- 207
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSD 350
VA+VGYTNAGKSTL +AL+ + +F+ +LFATLDP ++ + LPSG +++LSD
Sbjct: 208 ----PFPVVALVGYTNAGKSTLFNALTGATVFAQDQLFATLDPTMRGIRLPSGRRIILSD 263
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHV 382
TVGFISDLP +L+ AF ATLEEV EAD+++HV
Sbjct: 264 TVGFISDLPTELIAAFRATLEEVAEADVILHV 295
>gi|399062555|ref|ZP_10746608.1| GTP-binding protein HflX [Novosphingobium sp. AP12]
gi|398033649|gb|EJL26942.1| GTP-binding protein HflX [Novosphingobium sp. AP12]
Length = 470
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 203/399 (50%), Gaps = 75/399 (18%)
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
R +V P+++ P A L+ LEE R E +V++ P
Sbjct: 14 RALVVYPQMRGPRGQMADLDTE----ARLEEARGLALAIGLEVAE-AIAIVIREP----- 63
Query: 123 KARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
RA T FG G ++ I C +N AE + V+ L+ IQQRNLE + V+DR
Sbjct: 64 --RAATLFGEGQIQNISVACELNEAE------LVIVDGSLTAIQQRNLEEKLKRKVIDRT 115
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLI+EIF A T E +LQ ELA L Y+ RLVR T E R
Sbjct: 116 GLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQR 158
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG GF+ G GET+++ RR I +R + + ++E+VRRTR + R R + V
Sbjct: 159 GGFGFLGGPGETQIEADRRLIRDRMAKIRRELEQVRRTRGLHRGRREKAP------WPIV 212
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLP 359
A+VGYTNAGKSTL + L+ +++ ++ LFATLDP ++++ LP K +LSDTVGFISDLP
Sbjct: 213 ALVGYTNAGKSTLFNRLTGAEVMAEDLLFATLDPTMRAIRLPGMEKAILSDTVGFISDLP 272
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK-----LKN- 413
QLV AF ATLEEV AD++VHV D P+ E + VL VL +GV + L+N
Sbjct: 273 TQLVAAFRATLEEVTAADVIVHVRDIANPDTEAQKRQVLDVLADLGVLHPQPDARTLRNT 332
Query: 414 -------------------------MIEVWNKIDYHDEE 427
+IEVWNK D D E
Sbjct: 333 AREERAAGWAQEEKDEKADGEPQIPIIEVWNKWDLLDPE 371
>gi|329930826|ref|ZP_08284225.1| GTP-binding protein HflX [Paenibacillus sp. HGF5]
gi|328934528|gb|EGG31033.1| GTP-binding protein HflX [Paenibacillus sp. HGF5]
Length = 430
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 179/312 (57%), Gaps = 36/312 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+ QN + K F G G VE ++ I+G G AIF + LSG Q RNLE +
Sbjct: 54 VITQNREVPDSKW----FIGKGKVEELRMAIDGL---GATTAIF-DQELSGAQVRNLEES 105
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI++IF A T+E +Q ELA L Y RL +G +
Sbjct: 106 LDVKIIDRTQLILDIFAQRAKTREGIIQVELAQLTYLLPRL--------------SGHGK 151
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+S G G G RG GE++L+ RR I +R S L Q++EV R R + R R++ G
Sbjct: 152 NLSRLGAGIGTRG----PGESKLETDRRHIRDRISDLKRQLDEVTRHRTLHRERRKKSGA 207
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
+A+VGYTNAGKSTL++ L+ +D++ + +LFATLDP + + LPSGK V+L+D
Sbjct: 208 ------VQIALVGYTNAGKSTLLNRLTAADVYIENQLFATLDPTSRVLELPSGKEVVLTD 261
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV AF ATLEE EADL++HV+D ++P +E V +LQ +G ++
Sbjct: 262 TVGFIQNLPHDLVAAFRATLEEANEADLILHVVDASSPMRDEQMAVVQSILQDLGAAD-- 319
Query: 411 LKNMIEVWNKID 422
K I ++NK D
Sbjct: 320 -KPQIVLFNKKD 330
>gi|103486757|ref|YP_616318.1| HSR1-like GTP-binding protein [Sphingopyxis alaskensis RB2256]
gi|98976834|gb|ABF52985.1| GTP-binding protein, HSR1-related [Sphingopyxis alaskensis RB2256]
Length = 432
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/320 (41%), Positives = 179/320 (55%), Gaps = 37/320 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV L+ + RA T G G +E I I ++G + + V+A L+ IQQRNLE A+
Sbjct: 34 VVAIHRLRLRQTRAATLLGVGQIEAIVPDIA---ARG-VQLVVVDASLTAIQQRNLETAF 89
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 90 GTKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE------ 137
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I R + + +E+ RRTR +QR R+R
Sbjct: 138 -----RQRGGFGFLGGPGETQIEADRRMIRNRMARIRRSLEDARRTRQLQRTKRQRAP-- 190
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDT 351
+A+VGYTNAGKST + L+ SD+ ++ LFATLDP ++ + LP K +LSDT
Sbjct: 191 ----WPVIALVGYTNAGKSTFFNRLTGSDVMAEDMLFATLDPTMREIRLPGIDKAILSDT 246
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS---- 407
VGF+SDLP +LV AF ATLEEV ADL+VHV D P+ + V +L +GV+
Sbjct: 247 VGFVSDLPTELVAAFRATLEEVTTADLIVHVRDIVHPDTDAQYEDVRAILDSLGVNGPQD 306
Query: 408 -----EEKLKNMIEVWNKID 422
IE+WNK+D
Sbjct: 307 GEGADTASAIPQIEIWNKVD 326
>gi|409099868|ref|ZP_11219892.1| GTP-binding protein HflX [Pedobacter agri PB92]
Length = 396
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 170/297 (57%), Gaps = 33/297 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E IK ++ E +D + + LS Q RN++R G VLDR LI++IF
Sbjct: 64 TFVGTGKLEEIKAYVKSEE----IDTVVFDDELSPSQLRNIDRELGVKVLDRSNLILDIF 119
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T +AK Q ELA L Y RL G T E R GG G +
Sbjct: 120 ASRAQTAQAKTQVELAQLQYVLPRLT------GMWTHLE-----------RQKGGIG-MR 161
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR IL + S L ++ + R QR R + L VA+VGYTN
Sbjct: 162 GPGETQIESDRRIILNKISLLKERLRNIDRQNETQRKNRGQ--------LIRVALVGYTN 213
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKST+++ LS S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP LV+ F
Sbjct: 214 VGKSTIMNMLSKSEVFAENKLFATLDTTVRKVVIENLPFLLSDTVGFIRKLPHHLVECFK 273
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+TL+EV EADLL+HV+D + PN E+ TV + L+ +G + K+MI V+NKID +
Sbjct: 274 STLDEVREADLLIHVVDVSHPNFEDQINTVNETLKDIGAID---KDMILVFNKIDAY 327
>gi|167765041|ref|ZP_02437162.1| hypothetical protein BACSTE_03435 [Bacteroides stercoris ATCC
43183]
gi|167697710|gb|EDS14289.1| GTP-binding protein HflX [Bacteroides stercoris ATCC 43183]
Length = 419
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 184/334 (55%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I E ++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLDQANSVTYVGKGKLEEIKEYIRSEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKD 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R L VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------LIRVALVGYTNVGKSTLMTLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVIIENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G S K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLADIGASG---KPMILVFNKIDAY 339
>gi|294011655|ref|YP_003545115.1| GTP-binding protein HflX [Sphingobium japonicum UT26S]
gi|292674985|dbj|BAI96503.1| GTP-binding protein HflX [Sphingobium japonicum UT26S]
Length = 443
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 204/384 (53%), Gaps = 58/384 (15%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I E+ + + V+ LS +QQ NLE+A V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLARMEEA----ELVIVDNALSPVQQSNLEKATETKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V +TR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTKTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL + ++ + + ++ LFATLDP ++ + LP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRMTGAAVMAEDLLFATLDPTMRQIALPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL---------KNMIEV 417
ATLEEV+ ADL+VHV D P+ + R V+ VL ++G++ E +IE
Sbjct: 279 RATLEEVLSADLIVHVRDIAHPDSDAQRDDVMDVLGELGIAGEGAFEAGEGEEPPPIIEA 338
Query: 418 WNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE 477
WNK+D DE D + +R +T + DV + G+ D+ VS
Sbjct: 339 WNKLDLLDE-----------DAATLAR----ETATRRSDVVVLSALTGEGVDDLQRAVSA 383
Query: 478 DL--GESMNKNHNDYSDG----WL 495
L G +++ H +DG WL
Sbjct: 384 RLTAGAQIHRLHVPLADGAAMAWL 407
>gi|357974354|ref|ZP_09138325.1| GTP-binding protein, HSR1-like [Sphingomonas sp. KC8]
Length = 432
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 180/312 (57%), Gaps = 29/312 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + + + T FG G V+TI + AE+ + + V+ LS IQQRNLE+A
Sbjct: 51 VVEKMAFRLRDPKPATLFGSGQVDTIATAVRMAEA----ELVIVDGALSPIQQRNLEKAL 106
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 107 DVKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE------ 154
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L ++E V RTR + RA R+R
Sbjct: 155 -----RQRGGFGFLGGPGETQIEADRRMIRDRMAKLRRELENVTRTRGLHRARRQRAPWP 209
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDT 351
+A+VGYTNAGKSTL + ++ + + ++ LFATLDP ++ + LP K +LSDT
Sbjct: 210 ------VIALVGYTNAGKSTLFNRMTGATVMAENLLFATLDPTMRQISLPGIDKAILSDT 263
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+SDLP QLV AF ATLEEV ADL+VHV D + P+ E V VL ++G+ +
Sbjct: 264 VGFVSDLPTQLVAAFRATLEEVTAADLIVHVRDISHPDTEAQAADVAAVLAEIGIGGGEG 323
Query: 412 KNMI-EVWNKID 422
I E WNK+D
Sbjct: 324 GIPIFEAWNKLD 335
>gi|387886915|ref|YP_006317214.1| protease, GTP-binding subunit [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386871731|gb|AFJ43738.1| protease, GTP-binding subunit [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 435
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 184/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+++ + F G G +E IK + E D + N LS Q+RN+E+
Sbjct: 43 VVLESLDFNHPEPDIKYFCGMGKMEMIK----NKRDELEADLVVFNHPLSPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
++DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECKIMDRTRLILEIFSLRAKTHEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++ +D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITKADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL+++G+ +
Sbjct: 256 TVGFIKNLPHDLVEAFHATLEEAIESDLLVHVIDYADEDYKSYIEQVEKVLKEIGIVD-- 313
Query: 411 LKNMIEVWNKID 422
K MI V+NKID
Sbjct: 314 -KEMICVYNKID 324
>gi|387824411|ref|YP_005823882.1| GTP-binding protein HflX [Francisella cf. novicida 3523]
gi|328676010|gb|AEB28685.1| GTP-binding protein HflX [Francisella cf. novicida 3523]
Length = 435
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/312 (39%), Positives = 184/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLVR G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVR----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|347528178|ref|YP_004834925.1| putative GTP-binding protein HflX [Sphingobium sp. SYK-6]
gi|345136859|dbj|BAK66468.1| putative GTP-binding protein HflX [Sphingobium sp. SYK-6]
Length = 439
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/331 (39%), Positives = 182/331 (54%), Gaps = 48/331 (14%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + ++R FG G VE I + AE+ + + V+ L+ +QQ NLE+AW
Sbjct: 31 VVETGVWRVRQSRPAALFGSGQVEEIGALVAQAEA----ELVVVDNNLTPVQQSNLEKAW 86
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 87 SAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE------ 134
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + + ++++V RTR + RA R+R
Sbjct: 135 -----RQRGGFGFLGGPGETQIEADRRMIRDRMARIRRELDQVTRTRGLHRARRQRAP-- 187
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDT 351
+A+VGYTNAGKSTL + L+ +D+ + LFATLDP ++ + LP K +LSDT
Sbjct: 188 ----WPVIALVGYTNAGKSTLFNRLTGADVMAQDMLFATLDPTMRQISLPGIDKAILSDT 243
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE-- 409
VGF+SDLP QL+ AF ATLEEV+ ADL++HV D P+ E + VL VL +G +
Sbjct: 244 VGFVSDLPHQLIAAFRATLEEVLSADLILHVRDIAHPDTEAQKADVLDVLADLGAAPADE 303
Query: 410 ------------------KLKNMIEVWNKID 422
+ +IE+WNK D
Sbjct: 304 DGSAGKAEAPDAAHEGGGPVAPIIEIWNKAD 334
>gi|148656458|ref|YP_001276663.1| small GTP-binding protein [Roseiflexus sp. RS-1]
gi|148568568|gb|ABQ90713.1| small GTP-binding protein [Roseiflexus sp. RS-1]
Length = 454
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 169/295 (57%), Gaps = 24/295 (8%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F GPG +E I + D + + L+ Q RN+E A VLDR GLI++IF
Sbjct: 76 FIGPGKIEEIAA----LRDTLQYDLVVFDDELTPGQARNVEDALQTRVLDRTGLILDIFA 131
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA T E ++Q ELA Y RL R + T E S+ G G RG
Sbjct: 132 RHAQTHEGRVQVELAQYRYLLPRLRR------QWTHLERQAGGGGSSAGGVVGLRG---- 181
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I R L QIEEV R R V R RR+ G + +A+VGYTNA
Sbjct: 182 PGETQLEVDRRLIARRIQWLEQQIEEVHRHREVYRERRRQSG------IPVIAIVGYTNA 235
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ALS +++ ++ RLFATLDP + V LP G+ LL+DTVGFI LP QLV AF
Sbjct: 236 GKSTLLNALSGANVRAEDRLFATLDPTTRQVTLPGGQQALLTDTVGFIQKLPTQLVAAFR 295
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEE+ EAD+L+HVLD T PN + TVL L+ + V + + +I V NK+D
Sbjct: 296 ATLEEIREADVLLHVLDITHPNAAQQTQTVLDTLRDLHVED---RPIITVLNKVD 347
>gi|258542822|ref|YP_003188255.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-01]
gi|384042743|ref|YP_005481487.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-12]
gi|384051260|ref|YP_005478323.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-03]
gi|384054368|ref|YP_005487462.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-07]
gi|384057602|ref|YP_005490269.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-22]
gi|384060243|ref|YP_005499371.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-26]
gi|384063535|ref|YP_005484177.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-32]
gi|384119545|ref|YP_005502169.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256633900|dbj|BAH99875.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-01]
gi|256636959|dbj|BAI02928.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-03]
gi|256640012|dbj|BAI05974.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-07]
gi|256643068|dbj|BAI09023.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-22]
gi|256646123|dbj|BAI12071.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-26]
gi|256649176|dbj|BAI15117.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-32]
gi|256652163|dbj|BAI18097.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655220|dbj|BAI21147.1| GTP-binding GTPase HflX/HSR1 [Acetobacter pasteurianus IFO 3283-12]
Length = 448
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 194/318 (61%), Gaps = 36/318 (11%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
V+V+ L R+ T G G V++++ A ++D + V+A LS QQRNLE
Sbjct: 60 VIVRKDVLLLRSRRSATLLGKGQVDSLRI----AVKADQVDVVVVDAKLSPAQQRNLETE 115
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
G V+DR GLI++IF A A TKE +Q ELA L Y++SRLVR+ T E
Sbjct: 116 CGCKVIDRTGLILDIFGARAATKEGTVQVELAHLEYQRSRLVRL------WTHLE----- 164
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG GF+ G GET+++ RR I +R L +E+VRRTR + R AR+R
Sbjct: 165 ------RQRGGFGFLGGPGETQIEADRRMIGDRIVRLKKDLEQVRRTRGLHRQARKRV-- 216
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSD 350
VA+VGYTNAGKSTL +AL+ + +++ +LFATLDP ++++ LPSG +V+LSD
Sbjct: 217 ----PFPVVALVGYTNAGKSTLFNALTGATVYAQDQLFATLDPTMRAIDLPSGRRVILSD 272
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFISDLP +L+ AF ATLEEV EAD+++HV D P+ + VL VL+ G++++
Sbjct: 273 TVGFISDLPTELIAAFRATLEEVAEADIILHVRDVAHPDSASQKKDVLGVLE--GMAKDD 330
Query: 411 L------KNMIEVWNKID 422
+ + +IEV NK+D
Sbjct: 331 MLEQDWPERIIEVLNKVD 348
>gi|87199949|ref|YP_497206.1| small GTP-binding protein domain-containing protein
[Novosphingobium aromaticivorans DSM 12444]
gi|87135630|gb|ABD26372.1| Small GTP-binding protein domain [Novosphingobium aromaticivorans
DSM 12444]
Length = 426
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 178/318 (55%), Gaps = 30/318 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ L R T FG G VE I N +S EL + V+ LS IQQRNLE
Sbjct: 36 VVEAFILPIRTVRPATLFGEGQVERIAVACN--QSDAEL--VIVDGALSAIQQRNLEEKL 91
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+ V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 92 KRKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE------ 139
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I R + L ++E+VRRTR + R R+R
Sbjct: 140 -----RQRGGFGFLGGPGETQIEADRRLIRNRMARLRRELEQVRRTRGLHRERRQRAPWP 194
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDT 351
+A+VGYTNAGKSTL + L+ +D+ ++ LFATLDP ++++ LP K +LSDT
Sbjct: 195 ------VIALVGYTNAGKSTLFNRLTGADVMAEDLLFATLDPTMRAIRLPGVEKAILSDT 248
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFISDLP QLV AF ATLEEV AD++VHV D + + V Q+L +GV E
Sbjct: 249 VGFISDLPTQLVAAFRATLEEVTAADVIVHVRDVANLASADQKAEVEQILADLGVIGEAG 308
Query: 412 KN--MIEVWNKIDYHDEE 427
++E WNK D E
Sbjct: 309 STIPIVEAWNKWDLLTPE 326
>gi|359401668|ref|ZP_09194635.1| GTP-binding protein HflX [Novosphingobium pentaromativorans US6-1]
gi|357597008|gb|EHJ58759.1| GTP-binding protein HflX [Novosphingobium pentaromativorans US6-1]
Length = 446
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 178/313 (56%), Gaps = 43/313 (13%)
Query: 125 RADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
R T FG G ++ I C +N AE I V+ LS IQQRNLE + + V+DR GL
Sbjct: 60 RPGTLFGEGQIQNIATACELNEAE------LIIVDGSLSAIQQRNLEEKFKRKVIDRTGL 113
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A T E +LQ ELA L Y+ RLVR T E R GG
Sbjct: 114 ILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGG 156
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
GF+ G GET+++ RR I +R + + ++E+VRRTR + R R + VA+
Sbjct: 157 FGFLGGPGETQIEADRRMIRDRMAKIRRELEQVRRTRGLHRDRREKAP------WPIVAL 210
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQ 361
VGYTNAGKSTL + L+ +++ + LFATLDP ++++ LP K +LSDTVGFISDLP Q
Sbjct: 211 VGYTNAGKSTLFNRLTGAEVMAQNLLFATLDPTMRAIRLPGVEKAILSDTVGFISDLPTQ 270
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN-------- 413
LV AF ATLEEV ADL++HV D P+ + + VL VL +GV ++ +
Sbjct: 271 LVAAFRATLEEVTAADLILHVRDIANPDTDAQKRQVLDVLGDLGVLGSEVDDEAEEGAEP 330
Query: 414 ---MIEVWNKIDY 423
+IE+WNK D
Sbjct: 331 GIPIIELWNKWDL 343
>gi|325916037|ref|ZP_08178327.1| GTP-binding proten HflX [Xanthomonas vesicatoria ATCC 35937]
gi|325537713|gb|EGD09419.1| GTP-binding proten HflX [Xanthomonas vesicatoria ATCC 35937]
Length = 439
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/319 (41%), Positives = 180/319 (56%), Gaps = 32/319 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E IK AE+ G D + VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 56 TLIGSGKLEEIKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 112 AQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG---LR 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L +A+VGYTN
Sbjct: 155 GPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +AL+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP QLV AF
Sbjct: 209 AGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLPHQLVAAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKID D
Sbjct: 269 STLSEARDADLLLHIVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKIDKIDG- 324
Query: 428 MGDVEYIDGDDISNFSRAE 446
+V + D I + +R E
Sbjct: 325 -AEVRHDAQDGIPDRARRE 342
>gi|402822216|ref|ZP_10871714.1| GTP-binding protein HflX [Sphingomonas sp. LH128]
gi|402264240|gb|EJU14105.1| GTP-binding protein HflX [Sphingomonas sp. LH128]
Length = 464
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/341 (39%), Positives = 185/341 (54%), Gaps = 57/341 (16%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLER 170
VV+ ++ +AR T FG G ++ I C +N AE I V+ LS IQQRNLE
Sbjct: 52 VVEAMAIVIREARPGTLFGEGQIQNISTACTLNEAE------LIIVDGSLSAIQQRNLEE 105
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
+ V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 106 KLKRKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE---- 155
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
R GG GF+ G GET+++ RR I +R + + ++E+VRRTR + R R +
Sbjct: 156 -------RQRGGFGFLGGPGETQIEADRRMIRDRMAKIRRELEQVRRTRGLHRDRREKAP 208
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLS 349
VA+VGYTNAGKSTL + L+ + + ++ LFATLDP ++++ +P K +LS
Sbjct: 209 ------WPVVALVGYTNAGKSTLFNRLTGASVMAENLLFATLDPTMRAIRMPGLEKAILS 262
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGFISDLP +L+ AF ATLEEV AD+++HV D P+ E + VL VL +GV +
Sbjct: 263 DTVGFISDLPTELIAAFRATLEEVTAADVILHVRDIANPDTEAQKRQVLDVLADLGVIQP 322
Query: 410 KLKN-------------------------MIEVWNKIDYHD 425
L + +IEVWNK D D
Sbjct: 323 PLDDRKARQAPALDWSDDEPDDEPEPQVPIIEVWNKWDLLD 363
>gi|254525288|ref|ZP_05137343.1| GTP-binding proten HflX [Stenotrophomonas sp. SKA14]
gi|219722879|gb|EED41404.1| GTP-binding proten HflX [Stenotrophomonas sp. SKA14]
Length = 436
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 181/319 (56%), Gaps = 32/319 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGGNVVLADTVGFVRDLPHDLVAAFR 267
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID D
Sbjct: 268 STLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRIDG- 323
Query: 428 MGDVEYIDGDDISNFSRAE 446
DV + D I + SR E
Sbjct: 324 -ADVRHDGQDGIPDESRRE 341
>gi|408823849|ref|ZP_11208739.1| GTP-binding protein [Pseudomonas geniculata N1]
Length = 436
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 181/319 (56%), Gaps = 32/319 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGGNVVLADTVGFVRDLPHDLVAAFR 267
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID D
Sbjct: 268 STLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRIDG- 323
Query: 428 MGDVEYIDGDDISNFSRAE 446
DV + D I + SR E
Sbjct: 324 -ADVRHDGQDGIPDESRRE 341
>gi|190573719|ref|YP_001971564.1| GTP-binding phage-like protein [Stenotrophomonas maltophilia K279a]
gi|190011641|emb|CAQ45260.1| putative GTP-binding phage-related protein [Stenotrophomonas
maltophilia K279a]
gi|456734123|gb|EMF58945.1| GTP-binding protein HflX [Stenotrophomonas maltophilia EPM1]
Length = 436
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 181/319 (56%), Gaps = 32/319 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGGNVVLADTVGFVRDLPHDLVAAFR 267
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID D
Sbjct: 268 STLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRIDG- 323
Query: 428 MGDVEYIDGDDISNFSRAE 446
DV + D I + SR E
Sbjct: 324 -ADVRHDGQDGIPDESRRE 341
>gi|94496399|ref|ZP_01302976.1| GTPase [Sphingomonas sp. SKA58]
gi|94424145|gb|EAT09169.1| GTPase [Sphingomonas sp. SKA58]
Length = 444
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 177/309 (57%), Gaps = 38/309 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I E+ + I V+ LS +QQ NLE+A V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLARQEEA----ELIIVDNSLSPVQQSNLEKACEAKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V RTR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTRTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL + L+ +++ ++ LFATLDP ++ + LP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRLTGAEVMAEDLLFATLDPTMRQIALPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN----------MIE 416
ATLEEV+ ADL+VHV D P+ + R VL VL ++GV+ E +IE
Sbjct: 279 RATLEEVLSADLIVHVRDIAHPDSDAQRDDVLDVLGELGVTGEAALERGEGTSEPPPIIE 338
Query: 417 VWNKIDYHD 425
WNK+D D
Sbjct: 339 AWNKLDLLD 347
>gi|424668136|ref|ZP_18105161.1| GTP-binding protein HflX [Stenotrophomonas maltophilia Ab55555]
gi|401068398|gb|EJP76922.1| GTP-binding protein HflX [Stenotrophomonas maltophilia Ab55555]
Length = 436
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 181/319 (56%), Gaps = 32/319 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGGNVVLADTVGFVRDLPHDLVAAFR 267
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID D
Sbjct: 268 STLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRIDG- 323
Query: 428 MGDVEYIDGDDISNFSRAE 446
DV + D I + SR E
Sbjct: 324 -ADVRHDGQDGIPDESRRE 341
>gi|297544479|ref|YP_003676781.1| GTP-binding proten HflX [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842254|gb|ADH60770.1| GTP-binding proten HflX [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 413
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 207/386 (53%), Gaps = 42/386 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K + E+ D I VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELKFFVENQEA----DLIIVNDELTGTQIKNMEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE LQ ELA L Y+ RLV + G RL G G
Sbjct: 114 KRARSKEGMLQVELAQLKYRLPRLVGMGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE++R R +QR+ R+++ + VA+VGYTNA
Sbjct: 156 PGETKLEADRRHIQNRIKAIEKKLEEIKRHRDLQRSRRKKNQ------VPVVAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++AL+ ++++ + +LFATLDP + ++LPSG+ V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTKAEVYVEDKLFATLDPTARRLILPSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEVWNKIDYHD 425
+TLEEV ADLL+HV+D T+P++EE V +VL +G N+ I V+NKID +
Sbjct: 270 STLEEVKYADLLLHVIDVTSPDMEEKIKVVERVLSDLGAI-----NIPKINVFNKIDLLE 324
Query: 426 EEMGDVE---YIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGES 482
+ E YI + F + DVE ++ D ++ E +
Sbjct: 325 VVLKGNEREVYISAKNKIGFDNLLEAIEREIFKDVEVVNFLLPYDKTKEYNYLKEK-TKI 383
Query: 483 MNKNHNDYSDGWLLSGDEQDNVEEEF 508
+ +N+N+ DG ++ + Q +E+
Sbjct: 384 IEENYNE--DGIMIKAEVQKETKEKL 407
>gi|289578198|ref|YP_003476825.1| GTP-binding proten HflX [Thermoanaerobacter italicus Ab9]
gi|289527911|gb|ADD02263.1| GTP-binding proten HflX [Thermoanaerobacter italicus Ab9]
Length = 413
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 207/386 (53%), Gaps = 42/386 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K + E+ D I VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELKFFVENQEA----DLIIVNDELTGTQIKNMEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE LQ ELA L Y+ RLV + G RL G G
Sbjct: 114 KRARSKEGMLQVELAQLKYRLPRLVGIGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE++R R +QR+ R+++ + VA+VGYTNA
Sbjct: 156 PGETKLETDRRHIQNRIKAIEKKLEEIKRHRDLQRSRRKKNQ------VPVVAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++AL+ ++++ + +LFATLDP + ++LPSG+ V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTKAEVYVEDKLFATLDPTARRLILPSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEVWNKIDYHD 425
+TLEEV ADLL+HV+D T+P++EE V +VL +G N+ I V+NKID +
Sbjct: 270 STLEEVKYADLLLHVIDVTSPDMEEKIKVVERVLSDLGAI-----NIPKINVFNKIDLLE 324
Query: 426 EEMGDVE---YIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGES 482
+ E YI + F + DVE ++ D ++ E +
Sbjct: 325 VVLKGNEREVYISAKNKIGFDNLLEAIEREIFKDVEVVNFLLPYDKTKEYNYLKEK-TKI 383
Query: 483 MNKNHNDYSDGWLLSGDEQDNVEEEF 508
+ +N+N+ DG ++ + Q +E+
Sbjct: 384 IEENYNE--DGIMIKTEVQKETKEKL 407
>gi|334142000|ref|YP_004535207.1| GTP-binding protein HflX [Novosphingobium sp. PP1Y]
gi|333940031|emb|CCA93389.1| GTP-binding protein HflX [Novosphingobium sp. PP1Y]
Length = 425
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 175/313 (55%), Gaps = 43/313 (13%)
Query: 125 RADTFFGPGTVETI--KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
RA T FG G ++ I C +N AE I V+ LS IQQRNLE + V+DR GL
Sbjct: 39 RAGTLFGEGQIQNIGTACELNEAE------LIIVDGSLSAIQQRNLEEKLKRKVIDRTGL 92
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A T E +LQ ELA L Y+ RLVR T E R GG
Sbjct: 93 ILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGG 135
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
GF+ G GET+++ RR I +R + + ++E+VRRTR + R R + VA+
Sbjct: 136 FGFLGGPGETQIEADRRMIRDRMAKIRRELEQVRRTRGLHRDRREKAP------WPIVAL 189
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQ 361
VGYTNAGKSTL + L+ + + + LFATLDP ++++ LP K +LSDTVGFISDLP Q
Sbjct: 190 VGYTNAGKSTLFNRLTGAGVMAQDLLFATLDPTMRAIRLPGVEKAILSDTVGFISDLPTQ 249
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV-----------SEEK 410
LV AF ATLEEV ADL++HV D P+ + + VL VL +GV E
Sbjct: 250 LVAAFRATLEEVTAADLILHVRDIANPDTDAQKRQVLDVLGDLGVLGSVVDDDVEEGAEP 309
Query: 411 LKNMIEVWNKIDY 423
+IE+WNK D
Sbjct: 310 GIPIIELWNKWDL 322
>gi|423305193|ref|ZP_17283192.1| GTP-binding protein HflX [Bacteroides uniformis CL03T00C23]
gi|423311013|ref|ZP_17288982.1| GTP-binding protein HflX [Bacteroides uniformis CL03T12C37]
gi|392680045|gb|EIY73419.1| GTP-binding protein HflX [Bacteroides uniformis CL03T12C37]
gi|392682047|gb|EIY75397.1| GTP-binding protein HflX [Bacteroides uniformis CL03T00C23]
Length = 418
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 184/334 (55%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLDAAHSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R L VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------LIRVALVGYTNVGKSTLMTLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVIIENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G + K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLADIGAAG---KPMILVFNKIDAY 339
>gi|86140868|ref|ZP_01059427.1| GTP-binding protein HflX [Leeuwenhoekiella blandensis MED217]
gi|85832810|gb|EAQ51259.1| GTP-binding protein HflX [Leeuwenhoekiella blandensis MED217]
Length = 406
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 186/326 (57%), Gaps = 39/326 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ +++ E AIF + LS QQ+N+E+ V+DR LI++IF
Sbjct: 60 TFIGSGKMEEVRAYVDQYEIGT---AIFDDE-LSPAQQKNIEKILKCKVIDRTNLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYARTQVELAQYEYLLPRLA------GMWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R S L ++E++ + +A+QR R L VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDRISLLKKKLEKIDKQQAIQRGNRG--------ALVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNTISKSEVFAENKLFATLDTTVRKVVIRNLPFLLSDTVGFIRKLPTQLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV EADLL+HV+D + P E+H +V Q++ ++G S+ K M+ V+NKID + +
Sbjct: 270 STLDEVREADLLLHVVDISHPQFEDHIASVNQIMDEIGGSD---KPMLMVFNKIDQYTHK 326
Query: 428 MGDVEYIDGDDISNFSRAEDKDTTSE 453
ID DD+ R E+ T E
Sbjct: 327 T-----IDEDDLVT-ERTEEHFTLEE 346
>gi|194365250|ref|YP_002027860.1| GTP-binding proten HflX [Stenotrophomonas maltophilia R551-3]
gi|194348054|gb|ACF51177.1| GTP-binding proten HflX [Stenotrophomonas maltophilia R551-3]
Length = 436
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 181/319 (56%), Gaps = 32/319 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGGNVVLADTVGFVRDLPHDLVAAFR 267
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID E
Sbjct: 268 STLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRI--E 322
Query: 428 MGDVEYIDGDDISNFSRAE 446
DV + D I + SR E
Sbjct: 323 GADVRHDGQDGIPDESRRE 341
>gi|302141655|emb|CBI18834.3| unnamed protein product [Vitis vinifera]
Length = 212
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/226 (53%), Positives = 147/226 (65%), Gaps = 24/226 (10%)
Query: 381 HVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID-GDD- 438
HVLD +AP+L+E R+ VLQVLQQ+GVSEEKL+NM+EVWNKID +EEMG +Y+D G+D
Sbjct: 1 HVLDSSAPDLDEQRSIVLQVLQQIGVSEEKLQNMLEVWNKIDLQEEEMGADKYLDNGEDD 60
Query: 439 -ISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSE----DLGESMNKNHNDYSDG 493
+ + SRAE D SE + E + DD D ND VSE D+ E+M+ DYSDG
Sbjct: 61 VVDSLSRAEGGDMPSE-LSAEPV-----DDDDEND-IVSELSSGDVQETMDDREGDYSDG 113
Query: 494 WLLS---GDEQDNVEEEFWNAAEDQQPESTKDVCVMEKDSQSQDQHAPDVKISARTGVGL 550
WL G E D W +DQQ ES KD + EKDS SQ Q P VK SA GVGL
Sbjct: 114 WLSGGGEGSEDDQGSPPRWKTMDDQQSESFKDRRMTEKDSCSQPQCIPHVKTSAVMGVGL 173
Query: 551 QELLEIIDERLKTLDDKQKSPNVVERDFFNKKWRPPRTEDSSVAVE 596
QELL +IDE+L+T QK P ER++F++KWRPP TED VAVE
Sbjct: 174 QELLALIDEKLET----QKVP---ERNYFDRKWRPPHTEDVGVAVE 212
>gi|160891326|ref|ZP_02072329.1| hypothetical protein BACUNI_03775 [Bacteroides uniformis ATCC 8492]
gi|317481193|ref|ZP_07940268.1| GTP-binding protein HflX [Bacteroides sp. 4_1_36]
gi|156859547|gb|EDO52978.1| GTP-binding protein HflX [Bacteroides uniformis ATCC 8492]
gi|316902689|gb|EFV24568.1| GTP-binding protein HflX [Bacteroides sp. 4_1_36]
Length = 418
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 184/334 (55%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLDAAHSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R L VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------LIRVALVGYTNVGKSTLMTLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVIIENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G + K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLADIGAAG---KPMILVFNKIDAY 339
>gi|407973165|ref|ZP_11154077.1| GTP-binding proten HflX [Nitratireductor indicus C115]
gi|407431006|gb|EKF43678.1| GTP-binding proten HflX [Nitratireductor indicus C115]
Length = 436
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 123/264 (46%), Positives = 161/264 (60%), Gaps = 24/264 (9%)
Query: 160 LSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPD 219
L+ +QQRNLE+A VLDR GLI+EIF A TKE +LQ +LA L Y++ RLVR
Sbjct: 91 LTPVQQRNLEKALNAKVLDRTGLILEIFGRRARTKEGRLQVDLAHLEYQRGRLVR----- 145
Query: 220 GRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTR 279
T E R GG GF+ G GET+++ RR + ++ L ++E VRRTR
Sbjct: 146 -SWTHLE-----------RQRGGGGFMGGPGETQIEADRRLLQDKIVRLKRELETVRRTR 193
Query: 280 AVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSV 339
+ R+ RR+ VA+VGYTNAGKSTL + L+ + + ++ LFATLDP L+ V
Sbjct: 194 DLHRSKRRKVP------FPIVAIVGYTNAGKSTLFNRLTGASVMAEDMLFATLDPTLRRV 247
Query: 340 VLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVL 398
LP G V+LSDTVGFISDLP LV AF ATLEEVVEADL++H+ D + P+ V
Sbjct: 248 QLPHGTTVILSDTVGFISDLPTHLVAAFRATLEEVVEADLIIHLRDISDPDSSAQANDVA 307
Query: 399 QVLQQVGVSEEKLKNMIEVWNKID 422
+L +GV ++EVWNKID
Sbjct: 308 SILGDLGVDAADKTRVLEVWNKID 331
>gi|270294568|ref|ZP_06200770.1| GTP-binding protein HflX [Bacteroides sp. D20]
gi|270276035|gb|EFA21895.1| GTP-binding protein HflX [Bacteroides sp. D20]
Length = 418
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 184/334 (55%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLDAAHSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R L VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------LIRVALVGYTNVGKSTLMTLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVIIENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G + K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLADIGAAG---KPMILVFNKIDAY 339
>gi|208779443|ref|ZP_03246789.1| protease, GTP-binding subunit [Francisella novicida FTG]
gi|208745243|gb|EDZ91541.1| protease, GTP-binding subunit [Francisella novicida FTG]
Length = 435
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 184/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|344206942|ref|YP_004792083.1| GTP-binding proten HflX [Stenotrophomonas maltophilia JV3]
gi|343778304|gb|AEM50857.1| GTP-binding proten HflX [Stenotrophomonas maltophilia JV3]
Length = 436
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 132/319 (41%), Positives = 181/319 (56%), Gaps = 32/319 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG-GSIG---LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGGNVVLADTVGFVRDLPHDLVAAFR 267
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID D
Sbjct: 268 STLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRIDG- 323
Query: 428 MGDVEYIDGDDISNFSRAE 446
DV + D + + SR E
Sbjct: 324 -ADVRHDGQDGVPDESRRE 341
>gi|282889986|ref|ZP_06298521.1| hypothetical protein pah_c008o089 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500179|gb|EFB42463.1| hypothetical protein pah_c008o089 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 451
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/317 (40%), Positives = 186/317 (58%), Gaps = 29/317 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
+V + P L K A TF G +E + + D I + +S QQRNLE+A
Sbjct: 68 IVAKVPCL-IRKVDAATFVTQGKLE----ELITLSKECAADLIIFDDEISPSQQRNLEKA 122
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
+ V+DR +I+E+F A TKEA+LQ E A + Y+ RL R+ R
Sbjct: 123 FQLTVMDRTEVILEVFAQRAKTKEARLQIEYARVKYQAPRLKRLWSHLSR---------- 172
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
G+GG ++ G GE ++++ RR I +R L S+I+EV+ R +QR AR R
Sbjct: 173 --QHGSGGAGGGAYLKGEGEKQIEIDRRLIKKRLEQLQSEIQEVKEHREIQRVARTRSA- 229
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
+ A+VGYTNAGKSTL++AL+D+D+F + +LFATLD + L +G+ VL++D
Sbjct: 230 -----IPVFALVGYTNAGKSTLLNALTDADVFVEDKLFATLDTTTRKFPLSTGQEVLVTD 284
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP-NLEEHRTTVLQVLQQVGVSEE 409
TVGFI LP LV AF +TLEE ++AD+L+HV+D T P LE+ RTT+ QVL+++GV +
Sbjct: 285 TVGFIRKLPHLLVAAFKSTLEEAIQADILLHVIDATHPMALEQARTTI-QVLKELGVGD- 342
Query: 410 KLKNMIEVWNKIDYHDE 426
K +I V NKID ++
Sbjct: 343 --KPIITVLNKIDQAEQ 357
>gi|195536342|ref|ZP_03079349.1| GTPase of unknown function family protein, putative [Francisella
novicida FTE]
gi|194372819|gb|EDX27530.1| GTPase of unknown function family protein, putative [Francisella
tularensis subsp. novicida FTE]
Length = 403
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 184/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 11 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 66
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 67 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 113
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 114 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 168
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 169 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 223
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 224 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 281
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 282 -KETICVYNKID 292
>gi|404253578|ref|ZP_10957546.1| HSR1-like GTP-binding protein [Sphingomonas sp. PAMC 26621]
Length = 430
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 182/320 (56%), Gaps = 31/320 (9%)
Query: 108 LPPHV-VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
+ HV VV ++K + T G G +E + + AE+ + + +A L+ +QQR
Sbjct: 44 MAIHVEVVDRVAVKVRALQPATLIGKGQLEALAATVRMAEA----ELVVFDASLTPVQQR 99
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLE+A V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 100 NLEKALSAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE 153
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
R GG GF+ G GET+++ RR I +R + L ++E+V RTR + R R
Sbjct: 154 -----------RQRGGFGFLGGPGETQIEADRRLIRDRMARLKKELEQVSRTRGLHRDRR 202
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GK 345
+R +A+VGYTNAGKSTL + ++ +D+ ++ LFATLDP L+ + LP K
Sbjct: 203 QRAPWP------VIALVGYTNAGKSTLFNRMTGADVMAEDLLFATLDPTLRQIALPGIDK 256
Query: 346 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 405
+LSDTVGF+S+LP LV AF ATLEEVV ADLL+HV D P+ + V VL+ +G
Sbjct: 257 AILSDTVGFVSELPTLLVAAFKATLEEVVSADLLIHVRDIAHPDTIAQKDDVEAVLRDIG 316
Query: 406 VSEEKLKNMIEVWNKIDYHD 425
V + IE WNK+D D
Sbjct: 317 VDASVPR--IEAWNKLDLLD 334
>gi|388454931|ref|ZP_10137226.1| GTPase [Fluoribacter dumoffii Tex-KL]
Length = 418
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 178/301 (59%), Gaps = 32/301 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I + ++ + + VN LS Q+RNLER + V+DR GLI++
Sbjct: 54 AKYYIGKGKAEEIAQLVKALDA----ELVLVNHELSPSQERNLERLFECRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR R R ARR+ L TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKYINKRLEKVRGNRDQNRQARRKAS------LLTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL+ +++ +LFATLDP ++ + LP S V+L+DTVGFI DLP QLV+
Sbjct: 206 TNAGKSTLFNALTGENIYVANQLFATLDPTMRQLNLPGSSSVILTDTVGFIRDLPHQLVE 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATLEE +ADLL+HV+D + P+ ++ +V QVL ++GV + +I V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPHWRDNVFSVEQVLDELGVHD---IPVILVFNKIDLK 322
Query: 425 D 425
+
Sbjct: 323 E 323
>gi|254374455|ref|ZP_04989937.1| GTP-binding protein [Francisella novicida GA99-3548]
gi|385793024|ref|YP_005826000.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|151572175|gb|EDN37829.1| GTP-binding protein [Francisella novicida GA99-3548]
gi|332678349|gb|AEE87478.1| GTP-binding protein HflX [Francisella cf. novicida Fx1]
Length = 435
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 184/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|56707756|ref|YP_169652.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670227|ref|YP_666784.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis FSC198]
gi|254370260|ref|ZP_04986265.1| protease [Francisella tularensis subsp. tularensis FSC033]
gi|254874569|ref|ZP_05247279.1| protease [Francisella tularensis subsp. tularensis MA00-2987]
gi|379717006|ref|YP_005305342.1| GTP-binding protein HflX [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725610|ref|YP_005317796.1| GTP-binding protein HflX [Francisella tularensis subsp. tularensis
TI0902]
gi|385794392|ref|YP_005830798.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis NE061598]
gi|421755261|ref|ZP_16192211.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 80700075]
gi|56604248|emb|CAG45264.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320560|emb|CAL08647.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis FSC198]
gi|151568503|gb|EDN34157.1| protease [Francisella tularensis subsp. tularensis FSC033]
gi|254840568|gb|EET19004.1| protease [Francisella tularensis subsp. tularensis MA00-2987]
gi|282158927|gb|ADA78318.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis NE061598]
gi|377827059|gb|AFB80307.1| GTP-binding protein HflX [Francisella tularensis subsp. tularensis
TI0902]
gi|377828683|gb|AFB78762.1| GTP-binding protein HflX [Francisella tularensis subsp. tularensis
TIGB03]
gi|409088596|gb|EKM88660.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 80700075]
Length = 435
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 184/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|350564811|ref|ZP_08933627.1| GTP-binding proten HflX [Thioalkalimicrobium aerophilum AL3]
gi|349777513|gb|EGZ31877.1| GTP-binding proten HflX [Thioalkalimicrobium aerophilum AL3]
Length = 436
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 176/298 (59%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G ++ + A + + D + N LS Q+RN+ER V+DRVGLI++
Sbjct: 58 AKLFIGSGKLDEVAA----AVALHQADVVIFNHALSPGQERNIERVVKARVIDRVGLILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L + +RLVR G T R GG G
Sbjct: 114 IFAQRARSHEGKLQVELAQLRHMSTRLVR----------GWTHLE-------RQKGGIG- 155
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ +R + ER HLL +IE+VR+ RA+ R +R+R SD T+ +VGY
Sbjct: 156 LRGPGETQLESDKRLLQERIKHLLKRIEKVRKQRALGRQSRQR---SDH---PTITLVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ +D++++ RLFATLD L+SV LP G + +L+DTVGFI +P LV
Sbjct: 210 TNAGKSTLFNQLTAADVYAENRLFATLDATLRSVHLPGGGQAILADTVGFIRHIPHDLVT 269
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF +TLEE EADLL+H++D P ++ V QV+ +VG ++ + V+NKID
Sbjct: 270 AFRSTLEETSEADLLIHLIDAADPLRDDKIAQVQQVITEVGANDVP---QLLVFNKID 324
>gi|118497641|ref|YP_898691.1| protease, GTP-binding subunit [Francisella novicida U112]
gi|118423547|gb|ABK89937.1| protease, GTP-binding subunit [Francisella novicida U112]
Length = 436
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 184/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 44 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 99
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 100 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 146
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 147 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 201
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 202 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 256
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 257 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 314
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 315 -KETICVYNKID 325
>gi|332185025|ref|ZP_08386774.1| GTP-binding protein HflX [Sphingomonas sp. S17]
gi|332014749|gb|EGI56805.1| GTP-binding protein HflX [Sphingomonas sp. S17]
Length = 430
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 132/317 (41%), Positives = 178/317 (56%), Gaps = 30/317 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ +L+ + T G G VE + + E++ + + L+ +QQRNLE
Sbjct: 50 VVERIALRVRSPKPATLIGSGQVEQVAQQVRMEEAQ----LVVFDGSLTPVQQRNLETTL 105
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 106 EAKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE------ 153
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG GF+ G GET+++ RR I +R + L ++++V RTR + R R+R
Sbjct: 154 -----RQRGGFGFLGGPGETQIEADRRMIRDRMARLRRELDQVSRTRGLHRDRRQRAP-- 206
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDT 351
+A+VGYTNAGKSTL + L+ + + + LFATLDP L+ + LP K +LSDT
Sbjct: 207 ----WPIIALVGYTNAGKSTLFNRLTGAHVMAKDLLFATLDPTLRQIQLPGIDKAILSDT 262
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+SDLP QLV AF ATLEEVV ADLL+HV D P+ E R V VL ++GV E
Sbjct: 263 VGFVSDLPTQLVAAFKATLEEVVSADLLIHVRDIAHPDSEAQRADVEAVLTEIGVDPETP 322
Query: 412 KNMIEVWNKIDYHDEEM 428
+ E WNKID + E+
Sbjct: 323 R--FEAWNKIDLVEGEL 337
>gi|54295993|ref|YP_122362.1| hypothetical protein lpp0010 [Legionella pneumophila str. Paris]
gi|53749778|emb|CAH11158.1| hypothetical protein lpp0010 [Legionella pneumophila str. Paris]
Length = 414
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 178/311 (57%), Gaps = 32/311 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ + +LFATLDP ++ + LP S +L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATLEE +ADLL+HV+D + PN E V +VL ++ VS +I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVSN---IPVIQVFNKIDLQ 322
Query: 425 DEEMGDVEYID 435
+ ++Y +
Sbjct: 323 EGWQPKIDYTE 333
>gi|338175488|ref|YP_004652298.1| GTP-binding protein HflX [Parachlamydia acanthamoebae UV-7]
gi|336479846|emb|CCB86444.1| GTP-binding protein hflX [Parachlamydia acanthamoebae UV-7]
Length = 436
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 128/317 (40%), Positives = 186/317 (58%), Gaps = 29/317 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
+V + P L K A TF G +E + + D I + +S QQRNLE+A
Sbjct: 53 IVAKVPCLIR-KVDAATFVTQGKLE----ELITLSKECAADLIIFDDEISPSQQRNLEKA 107
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
+ V+DR +I+E+F A TKEA+LQ E A + Y+ RL R+ R
Sbjct: 108 FQLTVMDRTEVILEVFAQRAKTKEARLQIEYARVKYQAPRLKRLWSHLSR---------- 157
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
G+GG ++ G GE ++++ RR I +R L S+I+EV+ R +QR AR R
Sbjct: 158 --QHGSGGAGGGAYLKGEGEKQIEIDRRLIKKRLEQLQSEIQEVKEHREIQRVARTRSA- 214
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
+ A+VGYTNAGKSTL++AL+D+D+F + +LFATLD + L +G+ VL++D
Sbjct: 215 -----IPVFALVGYTNAGKSTLLNALTDADVFVEDKLFATLDTTTRKFPLSTGQEVLVTD 269
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP-NLEEHRTTVLQVLQQVGVSEE 409
TVGFI LP LV AF +TLEE ++AD+L+HV+D T P LE+ RTT+ QVL+++GV +
Sbjct: 270 TVGFIRKLPHLLVAAFKSTLEEAIQADILLHVIDATHPMALEQARTTI-QVLKELGVGD- 327
Query: 410 KLKNMIEVWNKIDYHDE 426
K +I V NKID ++
Sbjct: 328 --KPIITVLNKIDQAEQ 342
>gi|54113821|gb|AAV29544.1| NT02FT0764 [synthetic construct]
Length = 435
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 184/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|397665638|ref|YP_006507175.1| putative GTPase [Legionella pneumophila subsp. pneumophila]
gi|395129049|emb|CCD07271.1| putative GTPase [Legionella pneumophila subsp. pneumophila]
Length = 414
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 178/311 (57%), Gaps = 32/311 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ + +LFATLDP ++ + LP S +L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATLEE +ADLL+HV+D + PN E V +VL ++ VS +I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVSN---IPVIQVFNKIDLQ 322
Query: 425 DEEMGDVEYID 435
+ ++Y +
Sbjct: 323 EGWQPKIDYTE 333
>gi|386819514|ref|ZP_10106730.1| GTP-binding protein HflX [Joostella marina DSM 19592]
gi|386424620|gb|EIJ38450.1| GTP-binding protein HflX [Joostella marina DSM 19592]
Length = 404
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 178/312 (57%), Gaps = 38/312 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E I+ ++ S+ ++ + + L+ QQ+N+E+ +LDR LI++IF
Sbjct: 60 TFIGTGKMEQIREYV----SENDIGTVIFDDELTPAQQKNIEKILKAKILDRTSLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYARTQVELAQYQYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++E++ + QR R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLEKIDKQMETQRGNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S SD+F++ +LFATLD ++ VV+ + LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNVISKSDVFAENKLFATLDTTVRKVVIGNLPFLLSDTVGFIRKLPTQLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID ++ E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEEHIASVNQILDEIKSAD---KPTIMVFNKIDNYEHE 326
Query: 428 MGDVEYIDGDDI 439
ID DD+
Sbjct: 327 T-----IDEDDL 333
>gi|121533669|ref|ZP_01665496.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
gi|121307660|gb|EAX48575.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
Length = 597
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 178/308 (57%), Gaps = 52/308 (16%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G V IN +++ I + LS QQRNLE+A G VLDR LI++
Sbjct: 233 AAFFIGRGKVH----EINLLRQSKDINLIIFDDELSPAQQRNLEQALGVKVLDRTALILD 288
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T+E KLQ ELA L Y RL GG+G
Sbjct: 289 IFAQRARTREGKLQVELAQLRYNLPRL----------------------------GGQGL 320
Query: 246 I----------SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGR 295
+ G GET+L++ +RRI ER + + ++IE++++ R++ R R+R
Sbjct: 321 VLSRLGGGIGTRGPGETKLEVDKRRIRERIADIEAEIEQIKKHRSLHRERRQRAH----- 375
Query: 296 GLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGF 354
+ T+A+VGYTNAGKSTL++ L+++ + ++ +LFATLDP + + LP+G+ LL+DTVGF
Sbjct: 376 -VPTLALVGYTNAGKSTLLNTLTNASVLAEDKLFATLDPTTRRLKLPNGQEALLTDTVGF 434
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
I LP QL+ AF ATLEEVV ADLL+H++D + P EE +V +VL+++ + K++
Sbjct: 435 IQKLPHQLIAAFRATLEEVVYADLLLHIVDASHPRYEEQMDSVFEVLREL---QADTKDI 491
Query: 415 IEVWNKID 422
I V+NKID
Sbjct: 492 ITVFNKID 499
>gi|359407776|ref|ZP_09200250.1| GTP-binding protein HflX [SAR116 cluster alpha proteobacterium
HIMB100]
gi|356677139|gb|EHI49486.1| GTP-binding protein HflX [SAR116 cluster alpha proteobacterium
HIMB100]
Length = 435
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 203/372 (54%), Gaps = 53/372 (14%)
Query: 65 FLVQPRLKPPT------FLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPS 118
F+VQP LK + Q KL+EA LA +++ D KE+
Sbjct: 7 FIVQPELKQASQSGSTRTPQTKLDEAAGLAEAIQ--------LDVVHKEI---------- 48
Query: 119 LKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLD 178
+ K R+ T+ GPG V+ + G + +N LS +Q RNLE A V+D
Sbjct: 49 ITLSKPRSGTYLGPGVVD----RLAGLAEYHDHPLFIINTSLSPVQHRNLETALKCKVID 104
Query: 179 RVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR 238
R LI+EIF A A T +LQ ELAAL ++KSRLVR T E R
Sbjct: 105 RTALILEIFGARASTHAGRLQVELAALSFQKSRLVR------SWTHLE-----------R 147
Query: 239 GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
GG GF+ G GE +++L RR + ++ + ++ +V RTR +QR R D
Sbjct: 148 QRGGGGFLGGPGERQIELDRRMLTDQVKQIKKELSDVERTRGLQRRNR------DRSETP 201
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISD 357
T+A+VGYTNAGKSTL + L+ +D+ S LFATLDP ++ + LPSG+ ++L+DTVGFIS
Sbjct: 202 TIALVGYTNAGKSTLFNRLTGADVLSKDMLFATLDPTMRGMHLPSGRQIVLADTVGFISA 261
Query: 358 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN-MIE 416
LP +LV+AF +TLEEVV+ADL++HV D ++ E V VL +G E+ + ++
Sbjct: 262 LPTELVEAFKSTLEEVVQADLILHVHDMSSELCAEEALDVATVLDDIGFDEQARDDRILH 321
Query: 417 VWNKIDYHDEEM 428
++NK D E++
Sbjct: 322 IFNKADAAVEDV 333
>gi|334344357|ref|YP_004552909.1| GTP-binding proten HflX [Sphingobium chlorophenolicum L-1]
gi|334100979|gb|AEG48403.1| GTP-binding proten HflX [Sphingobium chlorophenolicum L-1]
Length = 443
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/308 (41%), Positives = 177/308 (57%), Gaps = 37/308 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T FG G V+ I E+ + + V+ LS +QQ NLE+A V+DR GLI+EIF
Sbjct: 66 TLFGSGQVDQIATLARMEEA----ELVIVDNALSPVQQSNLEKATETKVIDRTGLILEIF 121
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E +LQ ELA L Y+ RLVR T E R GG GF+
Sbjct: 122 GERAATNEGRLQVELAHLDYQAGRLVR------SWTHLE-----------RQRGGFGFLG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR I +R + + ++++V +TR + RA R+R +A+VGYTN
Sbjct: 165 GPGETQIEADRRMIRDRMAKIRRELDQVTKTRGLHRARRQRAP------WPVIALVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL + ++ +D+ ++ LFATLDP ++ + LP K +LSDTVGF+SDLP QL+ AF
Sbjct: 219 AGKSTLFNRMTGADVMAEDLLFATLDPTMRQIALPGLDKAILSDTVGFVSDLPTQLIAAF 278
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN---------MIEV 417
ATLEEV+ ADL+VHV D P+ + R V+ VL ++GV+ E +IE
Sbjct: 279 RATLEEVLSADLIVHVRDIAHPDSDAQRDDVIDVLSELGVAGEGALEAGEGNDPPPIIEA 338
Query: 418 WNKIDYHD 425
WNK+D D
Sbjct: 339 WNKLDLLD 346
>gi|260061118|ref|YP_003194198.1| GTP-binding protein HflX [Robiginitalea biformata HTCC2501]
gi|88785250|gb|EAR16419.1| GTP-binding protein HflX [Robiginitalea biformata HTCC2501]
Length = 405
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 175/300 (58%), Gaps = 33/300 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + K E+ ++ + LS +QQRN+E+ ++DR GLI++IF
Sbjct: 60 TFIGSGKLEEVQAFVK----KEEVGSVIFDDELSPVQQRNIEKQLRCKIIDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRATTSYARTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R S L ++ ++ + QR R GS L VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDRISLLKKKLAKIDKQMETQRGNR----GS----LVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VVL + LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNVVSKSEVFAENKLFATLDTTVRKVVLGNLPFLLSDTVGFIRKLPTQLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ +E K + V+NKID ++ E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEEHIDSVNQILAEIDCAE---KETLMVFNKIDLYEAE 326
>gi|21231170|ref|NP_637087.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66768822|ref|YP_243584.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
8004]
gi|188991937|ref|YP_001903947.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
B100]
gi|21112810|gb|AAM41011.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66574154|gb|AAY49564.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
8004]
gi|167733697|emb|CAP51902.1| GTP-binding protein, probable [Xanthomonas campestris pv.
campestris]
Length = 439
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 129/319 (40%), Positives = 179/319 (56%), Gaps = 32/319 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 56 TLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G +
Sbjct: 112 AQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRGGAIG----LR 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L +A+VGYTN
Sbjct: 155 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARMRSE------LPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +AL+ +D ++ +LFATLDP ++ + LP G +L+DTVGF+ DLP +LV AF
Sbjct: 209 AGKSTLFNALTGADAYAADQLFATLDPTVRRIALPGGSAVLADTVGFVRDLPHELVAAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKID E
Sbjct: 269 STLSEARDADLLLHIVDAADPLREERIHQVDEVLQAVGAGD--LPQLL-VFNKID--KIE 323
Query: 428 MGDVEYIDGDDISNFSRAE 446
+V + D I + +R E
Sbjct: 324 GAEVRHDAQDGIPDQARRE 342
>gi|384427605|ref|YP_005636964.1| GTP-binding protein [Xanthomonas campestris pv. raphani 756C]
gi|341936707|gb|AEL06846.1| GTP-binding protein [Xanthomonas campestris pv. raphani 756C]
Length = 439
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 129/319 (40%), Positives = 179/319 (56%), Gaps = 32/319 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 56 TLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G +
Sbjct: 112 AQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRGGAIG----LR 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L +A+VGYTN
Sbjct: 155 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARMRSE------LPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +AL+ +D ++ +LFATLDP ++ + LP G +L+DTVGF+ DLP +LV AF
Sbjct: 209 AGKSTLFNALTGADAYAADQLFATLDPTVRRIALPGGSAVLADTVGFVRDLPHELVAAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKID E
Sbjct: 269 STLSEARDADLLLHIVDAADPLREERIHQVDEVLQAVGAGD--LPQLL-VFNKID--KIE 323
Query: 428 MGDVEYIDGDDISNFSRAE 446
+V + D I + +R E
Sbjct: 324 GAEVRHDAQDGIPDQARRE 342
>gi|254369245|ref|ZP_04985257.1| protease [Francisella tularensis subsp. holarctica FSC022]
gi|157122195|gb|EDO66335.1| protease [Francisella tularensis subsp. holarctica FSC022]
Length = 435
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 184/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+++ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEIIFSD 255
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|254373007|ref|ZP_04988496.1| hypothetical protein FTCG_00580 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570734|gb|EDN36388.1| hypothetical protein FTCG_00580 [Francisella novicida GA99-3549]
Length = 435
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 184/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RL++ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLIK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQITQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|326387750|ref|ZP_08209356.1| small GTP-binding protein domain-containing protein
[Novosphingobium nitrogenifigens DSM 19370]
gi|326207796|gb|EGD58607.1| small GTP-binding protein domain-containing protein
[Novosphingobium nitrogenifigens DSM 19370]
Length = 448
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 151/384 (39%), Positives = 204/384 (53%), Gaps = 59/384 (15%)
Query: 54 FNRDPDD-------PPRLFLVQPRLKPPTFL----QAKLNEALCLANSLEEQRDGYFDTD 102
F R+PDD + +V P L+ L +A+L+E LA ++ G D
Sbjct: 6 FGRNPDDLKGEVTHGAKALVVLPDLRQRGGLGVDAEARLDEGQGLARAI-----GIVVVD 60
Query: 103 FFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSG 162
F LP V R T FG G V+ K + +S EL + V+ LS
Sbjct: 61 AFI--LPIRAV-----------RPATLFGEGQVD--KIAVACEQSDAEL--VIVDGALSA 103
Query: 163 IQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRL 222
IQQRNLE + V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR
Sbjct: 104 IQQRNLEDRLKRKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SW 157
Query: 223 TFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQ 282
T E R GG GF+ G GET+++ RR I R + + ++E+VRRTR +
Sbjct: 158 THLE-----------RQRGGFGFLGGPGETQIEADRRLIRGRMARIRRELEQVRRTRGLH 206
Query: 283 RAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP 342
R R+R +A+VGYTNAGKSTL + L+ + + ++ LFATLDP ++++ LP
Sbjct: 207 RERRQRAP------WPIIALVGYTNAGKSTLFNRLTGATVMAEDLLFATLDPTMRAIRLP 260
Query: 343 S-GKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVL 401
K +LSDTVGFISDLP QLV AF ATLEEV AD++VHV D P + + V +L
Sbjct: 261 GVDKAILSDTVGFISDLPTQLVAAFRATLEEVTAADVIVHVRDVANPASAQQKREVEDIL 320
Query: 402 QQVGVSEEKLKN--MIEVWNKIDY 423
+GV E+ + ++E WNKID
Sbjct: 321 TDLGVIGEEGTSIPIVEAWNKIDL 344
>gi|148358150|ref|YP_001249357.1| GTP binding protein HflX [Legionella pneumophila str. Corby]
gi|296105508|ref|YP_003617208.1| GTPase [Legionella pneumophila 2300/99 Alcoy]
gi|148279923|gb|ABQ54011.1| GTP binding protein HflX [Legionella pneumophila str. Corby]
gi|295647409|gb|ADG23256.1| GTPase [Legionella pneumophila 2300/99 Alcoy]
Length = 414
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 178/311 (57%), Gaps = 32/311 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ + +LFATLDP ++ + LP S +L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATLEE +ADLL+HV+D + PN E V +VL ++ VS +I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVSN---IPVIQVFNKIDLQ 322
Query: 425 DEEMGDVEYID 435
+ ++Y +
Sbjct: 323 EGWQPKIDYTE 333
>gi|187931478|ref|YP_001891462.1| protease, GTP-binding subunit [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712387|gb|ACD30684.1| protease, GTP-binding subunit [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 436
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 185/312 (59%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 44 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 99
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 100 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 146
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G+GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 147 ----LERQKGGIGVRGGSGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 201
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 202 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 256
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 257 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 314
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 315 -KETICVYNKID 325
>gi|41582279|gb|AAS07893.1| GTP-binding protein HflX [uncultured marine bacterium 463]
Length = 423
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 179/296 (60%), Gaps = 32/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E I+ +N E+ + + N ILS Q+RNLE+ VLDR GLI++IF
Sbjct: 57 TFIGSGKLEEIRDEVNLQEA----EVVMFNHILSPSQERNLEQELECRVLDRTGLILDIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E KLQ ELA L + +RLVR G T R GG G +
Sbjct: 113 AQRARTHEGKLQVELAQLQHVATRLVR----------GWTHLE-------RQKGGIG-LR 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + R + +++E+VR+ R R +R+R + + TV++VGYTN
Sbjct: 155 GPGETQLETDRRLLRIRIKSITARLEKVRKQRDQGRRSRKR------QEIPTVSLVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL + ++DS +++ +LFATLDP L+ + L + G V+L+DTVGFI+ LP +LV+AF
Sbjct: 209 AGKSTLFNYITDSGVYAADQLFATLDPTLRRLELENVGPVVLADTVGFIAHLPHKLVEAF 268
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEE + ADLL+HV+D + E++ V +VLQ++G E +E++NK+D
Sbjct: 269 KATLEETLNADLLLHVIDAASDEREDNIYQVHEVLQEIGADE---IPRLEIYNKLD 321
>gi|134302062|ref|YP_001122031.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis WY96-3418]
gi|421751876|ref|ZP_16188913.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis AS_713]
gi|421753731|ref|ZP_16190720.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 831]
gi|421757457|ref|ZP_16194337.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 80700103]
gi|421759314|ref|ZP_16196147.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 70102010]
gi|424674632|ref|ZP_18111548.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 70001275]
gi|134049839|gb|ABO46910.1| GTP-binding protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|409086413|gb|EKM86532.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 831]
gi|409086603|gb|EKM86719.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis AS_713]
gi|409091040|gb|EKM91045.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 70102010]
gi|409092545|gb|EKM92516.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 80700103]
gi|417434676|gb|EKT89618.1| protease, GTP-binding subunit [Francisella tularensis subsp.
tularensis 70001275]
Length = 435
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 184/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q+ + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQSLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G +
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK-----GWIHLE------ 147
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 148 ------RQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+V+ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSD 255
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|254481040|ref|ZP_05094286.1| GTP-binding proten HflX [marine gamma proteobacterium HTCC2148]
gi|214038835|gb|EEB79496.1| GTP-binding proten HflX [marine gamma proteobacterium HTCC2148]
Length = 436
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 179/296 (60%), Gaps = 32/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E I+ +N E+ + + N ILS Q+RNLE+ VLDR GLI++IF
Sbjct: 70 TFIGSGKLEEIRDEVNLQEA----EVVMFNHILSPSQERNLEQELECRVLDRTGLILDIF 125
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T E KLQ ELA L + +RLVR G T R GG G +
Sbjct: 126 AQRARTHEGKLQVELAQLQHVATRLVR----------GWTHLE-------RQKGGIG-LR 167
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + R + +++E+VR+ R R +R+R + + TV++VGYTN
Sbjct: 168 GPGETQLETDRRLLRIRIKSITARLEKVRKQRDQGRRSRKR------QEIPTVSLVGYTN 221
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL + ++DS +++ +LFATLDP L+ + L + G V+L+DTVGFI+ LP +LV+AF
Sbjct: 222 AGKSTLFNYITDSGVYAADQLFATLDPTLRRLELENVGPVVLADTVGFIAHLPHKLVEAF 281
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEE + ADLL+HV+D + E++ V +VLQ++G E +E++NK+D
Sbjct: 282 KATLEETLNADLLLHVIDAASDEREDNIYQVHEVLQEIGADE---IPRLEIYNKLD 334
>gi|23011756|ref|ZP_00052024.1| COG2262: GTPases [Magnetospirillum magnetotacticum MS-1]
Length = 376
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/278 (44%), Positives = 170/278 (61%), Gaps = 25/278 (8%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
E+ + ++ L+ +QQRNLE+AWG V+DR GLI+EIF A T+E LQ E A L Y++
Sbjct: 9 EIGLVVMDCALTPVQQRNLEKAWGAKVIDRTGLILEIFGRRASTREGTLQVEHAHLAYQR 68
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
SRLVR T E R GG GF+ G GET+++ RR I ER + +
Sbjct: 69 SRLVR------SWTHLE-----------RQRGGFGFLGGPGETQIEADRRMIQERMTRIE 111
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
++ V RTR + R +R R VA+VGYTNAGKSTL +AL+ +++ + LF
Sbjct: 112 RDLDAVTRTRGLHRKSRARV------PYPIVALVGYTNAGKSTLFNALTKAEVKAQDMLF 165
Query: 330 ATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 388
ATLDP ++ LP G+ V+LSDTVGFISDLP L+ AF ATLE+V+EAD+L+HV D +
Sbjct: 166 ATLDPTARATKLPHGETVILSDTVGFISDLPTSLIAAFRATLEDVIEADILLHVRDVSHG 225
Query: 389 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
+ + V VL+++G+ + +IEVWNK D DE
Sbjct: 226 DTQAQAEDVEAVLRELGIKADA-DRIIEVWNKADLLDE 262
>gi|325924507|ref|ZP_08186026.1| GTP-binding proten HflX [Xanthomonas gardneri ATCC 19865]
gi|325545002|gb|EGD16337.1| GTP-binding proten HflX [Xanthomonas gardneri ATCC 19865]
Length = 427
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 152/410 (37%), Positives = 206/410 (50%), Gaps = 60/410 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 44 TLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGLILDIF 99
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G +
Sbjct: 100 AQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRGGAIG----LR 142
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L +A+VGYTN
Sbjct: 143 GPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIALVGYTN 196
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +AL+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP QLV AF
Sbjct: 197 AGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLPHQLVAAFR 256
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL E +ADLL+H++D P EE V +VL VG + L ++ V+NKID E
Sbjct: 257 STLSEARDADLLLHIVDAADPLREERIRQVDEVLHAVGAGD--LPQLL-VFNKIDKI--E 311
Query: 428 MGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDG------------FV 475
V + D I + +R E V V D G ++ + G +
Sbjct: 312 GAQVRHDAQDGIPDQAR-------RERVWVSARDGRGLEELQHALGQRLDLRHLTGQLRL 364
Query: 476 SEDLGESMNKNH------NDYS--DGWLLSGDEQDNVEEEFWNAAEDQQP 517
G +K H N+ S DGWLL D VE E AAED P
Sbjct: 365 PPSAGRLRSKLHQLEVVRNEQSDEDGWLLDVD-LPMVEAERLAAAEDGAP 413
>gi|89256256|ref|YP_513618.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica LVS]
gi|115314713|ref|YP_763436.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica OSU18]
gi|290953596|ref|ZP_06558217.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica URFT1]
gi|423050604|ref|YP_007009038.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica F92]
gi|89144087|emb|CAJ79338.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica LVS]
gi|115129612|gb|ABI82799.1| GTP-binding protein HflX [Francisella tularensis subsp. holarctica
OSU18]
gi|421951326|gb|AFX70575.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica F92]
Length = 435
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 183/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 43 VVLQGLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 98
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 99 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 145
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 146 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 200
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+++ SD
Sbjct: 201 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEIIFSD 255
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 256 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 313
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 314 -KETICVYNKID 324
>gi|282880264|ref|ZP_06288980.1| GTP-binding protein HflX [Prevotella timonensis CRIS 5C-B1]
gi|281305859|gb|EFA97903.1| GTP-binding protein HflX [Prevotella timonensis CRIS 5C-B1]
Length = 415
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 210/388 (54%), Gaps = 25/388 (6%)
Query: 78 QAKLNEALCLANSLEEQRDG----YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPG 133
+AK A+ + +EQ + Y D F + V+ + K+G A T+ G G
Sbjct: 8 EAKSETAVLVGIVTQEQNEAKTNEYLDELEFLADTAGAETVKRFTQKAGGPNAVTYVGKG 67
Query: 134 TVETIKCHING-AESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAH 192
+E IK +I+ AE++ + + + LS Q RN+E+A +LDR LI++IF A
Sbjct: 68 KLEEIKQYIDEEAENERPVGMVIFDDELSAKQIRNIEKALDVKILDRTSLILDIFAMRAQ 127
Query: 193 TKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGET 252
T AK Q ELA Y RL R+ E + + G G + G GET
Sbjct: 128 TANAKTQVELAQYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGET 178
Query: 253 ELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKST 312
+L++ RR IL+R + L ++E++ + + QR R R + VA+VGYTN GKST
Sbjct: 179 QLEMDRRIILQRITLLKQRLEQIDKQKTTQRKNRGR--------MIRVALVGYTNVGKST 230
Query: 313 LVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEE 372
L++ LS S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP LVD+F +TL+E
Sbjct: 231 LMNLLSKSEVFAENKLFATLDTTVRKVVVENLPFLLADTVGFIRKLPTDLVDSFKSTLDE 290
Query: 373 VVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVE 432
V EADLL+HV+D + P+ EE V L+++G +E+ +MI ++NKID + D +
Sbjct: 291 VREADLLLHVVDISHPDFEEQIHVVENTLKELGCAEK--PSMI-IFNKIDNYTWVPKDAD 347
Query: 433 YIDGDDISNFSRAEDKDTTSEPVDVECI 460
+ N + E K T ++ +C+
Sbjct: 348 DLTPSTAENITLDELKQTWMARLNDQCL 375
>gi|422938675|ref|YP_007011822.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica FSC200]
gi|407293826|gb|AFT92732.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica FSC200]
Length = 436
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 183/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 44 VVLQGLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 99
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 100 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 146
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 147 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 201
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+++ SD
Sbjct: 202 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEIIFSD 256
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 257 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 314
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 315 -KETICVYNKID 325
>gi|269926513|ref|YP_003323136.1| GTP-binding proten HflX [Thermobaculum terrenum ATCC BAA-798]
gi|269790173|gb|ACZ42314.1| GTP-binding proten HflX [Thermobaculum terrenum ATCC BAA-798]
Length = 441
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 170/296 (57%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G + + N + + + LS Q+RNLE ++DR LI++IF
Sbjct: 70 TFIGKGKLRELADMKNATGAT----VVLFDDELSPSQERNLEDELKCKIIDRSALILDIF 125
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKE +LQ ELA L Y+ RL R+ R +G GG G +
Sbjct: 126 ARRARTKEGRLQVELAQLEYRLPRLTRMWTHLSR----------------QGVGGVG-LR 168
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L++ RR+ ER +H+ +IE+VR+ R + R R+ GL V++VGYTN
Sbjct: 169 GPGETQLEVDRRQSRERITHIKREIEQVRKHRKILREHRK------AEGLPVVSLVGYTN 222
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKV-LLSDTVGFISDLPLQLVDAF 366
AGKSTL++ L+ +D+ ++ +LFATLDP + V LP+G + L +DTVGFI LP LV AF
Sbjct: 223 AGKSTLLNKLAGADVLAEDKLFATLDPTTRQVRLPAGMLSLWTDTVGFIQKLPTDLVAAF 282
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEE++EAD+LVHV+D T N EE TV + L+ +G ++ K + NK+D
Sbjct: 283 RATLEEILEADVLVHVVDITHENAEEQAATVNETLRSLGAAD---KPTVVALNKVD 335
>gi|329961837|ref|ZP_08299851.1| GTP-binding protein HflX [Bacteroides fluxus YIT 12057]
gi|328531277|gb|EGF58121.1| GTP-binding protein HflX [Bacteroides fluxus YIT 12057]
Length = 420
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 185/334 (55%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I G E ++ E
Sbjct: 28 ERRTNEYLDELAFLAETAGAEVVRRFTQKLDQANSVTYVGKGKLEEIKEYIKGEEEAERE 87
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 88 VGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 147
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 148 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 198
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKSTL++ L+ S++F++ +LFA
Sbjct: 199 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTLMNLLAKSEVFAENKLFA 250
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 251 TLDTTVRKVIIENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDF 310
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G + K MI V+NKID +
Sbjct: 311 EEQIEVVNKTLADIGAAG---KPMILVFNKIDAY 341
>gi|399517194|ref|ZP_10758751.1| GTP-binding protein related to HflX [Leuconostoc
pseudomesenteroides 4882]
gi|398647902|emb|CCJ66778.1| GTP-binding protein related to HflX [Leuconostoc
pseudomesenteroides 4882]
Length = 426
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/311 (41%), Positives = 177/311 (56%), Gaps = 46/311 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE I+ A + E+D I N L+ Q RNLE+A V+DR GLI++IF
Sbjct: 53 TYFGKGKVE----EISAAVATYEVDMIVANDELTPSQIRNLEKATNATVVDRTGLILDIF 108
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TK A+LQ +LA L Y+ +RL R + T + + G+GG GF S
Sbjct: 109 AQRAQTKVAQLQVQLARLQYQLTRL--------RTSMSITLDQQT------GAGGGGFTS 154
Query: 248 -GAGETELQLQRRRILERRSHL---LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
GAGET+L+ RRRI + H+ L+ +E+ TR+ QR L +VA+V
Sbjct: 155 RGAGETKLEQSRRRITAQMVHIRQELADLEKGETTRSAQR---------QNNDLPSVALV 205
Query: 304 GYTNAGKSTLVSAL----------SDS-DLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
GYTNAGKSTL++ L +DS +F LFATL+ ++ + LP K LLSDT
Sbjct: 206 GYTNAGKSTLMNRLLARFGVGANNNDSKQVFEKDMLFATLNTTVRQLTLPDKKQFLLSDT 265
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+S +P LV AF +TL+E ADLL+HV+D + P+ ++ TT Q LQ++GVS
Sbjct: 266 VGFVSKIPHNLVAAFKSTLQEAASADLLLHVVDVSDPHYQDMMTTTSQTLQEIGVSG--- 322
Query: 412 KNMIEVWNKID 422
+ I V+NK D
Sbjct: 323 RQTITVYNKAD 333
>gi|404486318|ref|ZP_11021509.1| GTP-binding protein HflX [Barnesiella intestinihominis YIT 11860]
gi|404336831|gb|EJZ63289.1| GTP-binding protein HflX [Barnesiella intestinihominis YIT 11860]
Length = 410
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 169/295 (57%), Gaps = 32/295 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G + IK +I + E+ + + LS Q +N+ER +LDR LI++IF
Sbjct: 62 TFVGSGKLSEIKAYI----EENEIGMVIFDDDLSSKQVQNIERELQVKILDRTSLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 AKRAQTANAKRQVELAQYQYLLPRLTRLW-----------------THLERQRGGIG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR IL++ SHL +++ + R +++QR R + L VA+VGYTN
Sbjct: 160 GPGETQIETDRRIILDKISHLKEELKSIDRQKSIQRKNRGK--------LVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ LS S++F++ +LFATLD ++ V++ + LLSDTVGFI LP LVD+F
Sbjct: 212 VGKSTLMNLLSKSEVFAENKLFATLDTTVRKVIVDNLPFLLSDTVGFIRKLPTHLVDSFK 271
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV EADLL+H++D + P EE V + LQ+V S + K MI V+NKID
Sbjct: 272 STLDEVREADLLLHIVDISHPAFEEQIEVVNKTLQEVCDSTD--KPMILVFNKID 324
>gi|397662567|ref|YP_006504105.1| putative GTPase [Legionella pneumophila subsp. pneumophila]
gi|395125978|emb|CCD04153.1| putative GTPase [Legionella pneumophila subsp. pneumophila]
Length = 414
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/313 (41%), Positives = 180/313 (57%), Gaps = 36/313 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ + +LFATLDP ++ + LP S +L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEVWNKID 422
AF ATLEE +ADLL+HV+D + PN E TV +V Q + E K+ N+ I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPNWRE---TVFEV--QKVLDELKVNNIPVIQVFNKID 320
Query: 423 YHDEEMGDVEYID 435
+ ++Y +
Sbjct: 321 LQEGWQPKIDYTE 333
>gi|156502317|ref|YP_001428382.1| protease, GTP-binding subunit [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|156252920|gb|ABU61426.1| putative GTPase [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 403
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 183/312 (58%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q + F G G +E IK + E D + N L+ Q+RN+E+
Sbjct: 11 VVLQGLDFNHPEPDIKYFCGMGKIEMIK----NKRDELEADLVVFNHPLTPSQERNIEKF 66
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI+EIF+ A T E KLQ ELA L Y+ +RLV+ G T
Sbjct: 67 LECRVMDRTRLILEIFSLRAKTYEGKLQVELAQLNYQSTRLVK----------GWTH--- 113
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G G GET+L++ RR I +R + ++E+V+ R + R++R+++
Sbjct: 114 ----LERQKGGIGVRGGPGETQLEIDRRLIRQRIKQIAQKLEKVKHHRDLSRSSRKKNN- 168
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T++ VGYTNAGKSTL + ++++D+ + +LFATLDP L+ V++P G+++ SD
Sbjct: 169 -----IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEIIFSD 223
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV+AFHATLEE +E+DLLVHV+D + + + V +VL ++G+++
Sbjct: 224 TVGFIKNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIAD-- 281
Query: 411 LKNMIEVWNKID 422
K I V+NKID
Sbjct: 282 -KETICVYNKID 292
>gi|163846033|ref|YP_001634077.1| GTP-binding proten HflX [Chloroflexus aurantiacus J-10-fl]
gi|222523761|ref|YP_002568231.1| GTP-binding proten HflX [Chloroflexus sp. Y-400-fl]
gi|163667322|gb|ABY33688.1| GTP-binding proten HflX [Chloroflexus aurantiacus J-10-fl]
gi|222447640|gb|ACM51906.1| GTP-binding proten HflX [Chloroflexus sp. Y-400-fl]
Length = 445
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 171/295 (57%), Gaps = 24/295 (8%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F GPG V+ + + + D I + LS Q RNLE V+DR GLI++IF
Sbjct: 69 FIGPGKVKEVAA----LREQTQADLIVFDDELSPAQTRNLEEELQTQVIDRTGLILDIFA 124
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA T E +LQ ELA Y RL R + T E +A G G RG
Sbjct: 125 RHARTHEGRLQVELAQYQYLLPRLRR------QWTHLERQAGTGGTAAGGVVGLRG---- 174
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I R + L Q+ +V R R + R RR+ G + +A+VGYTNA
Sbjct: 175 PGETQLEIDRRLIERRIAWLKDQLADVHRHRELYRQRRRQTG------IPVIALVGYTNA 228
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKV-LLSDTVGFISDLPLQLVDAFH 367
GKSTL++A++ +D+ ++ +LFATLDP + V+LP V L++DTVGFI LP QLV AF
Sbjct: 229 GKSTLLNAMTGADVLAEDKLFATLDPTTRQVLLPGNIVALMTDTVGFIQKLPPQLVAAFR 288
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEE+ EADLL+HV+D T N +EH TV Q L+++GV K ++ V NKID
Sbjct: 289 ATLEEIEEADLLLHVVDVTHRNAQEHAQTVEQTLRELGVDH---KPVLTVLNKID 340
>gi|224009828|ref|XP_002293872.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970544|gb|EED88881.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 453
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 175/294 (59%), Gaps = 29/294 (9%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+ +A L+ QQ+ LE A+ + V+DR LI++IF HA T+E KLQ +LA Y+K RL
Sbjct: 72 VVFDAELTPGQQKALENAFNRKVVDRTALILDIFAQHAKTREGKLQVDLALHEYRKPRLT 131
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
R+ T E R GSGG G + G GET+L++ +R + +R L +I+
Sbjct: 132 RM------WTHLE---------RQSGSGGVG-LRGPGETQLEVDKRILRDRILVLKEKID 175
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLD 333
+V++ R + R R++ G L +A+VGYTNAGKSTL++ L+ + + ++ LFATLD
Sbjct: 176 DVQKQRDLHRRGRKKGG------LPVLALVGYTNAGKSTLLNCLTKAGILAENILFATLD 229
Query: 334 PRLKSVVLPSGK----VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
P + V LP K VLL+DTVGFI LP QLV AF ATLEEV EAD+LVH++D + P
Sbjct: 230 PTTRRVKLPGYKTHPEVLLTDTVGFIQKLPTQLVAAFRATLEEVKEADVLVHIVDVSNPC 289
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFS 443
+ +V +VL ++G + K + V+NK+D D+E ++ + NFS
Sbjct: 290 WRKQEDSVTKVLSEIGAGD---KPTVRVFNKLDLLDKEDAELIKYEAACSENFS 340
>gi|334143608|ref|YP_004536764.1| GTP-binding proten HflX [Thioalkalimicrobium cyclicum ALM1]
gi|333964519|gb|AEG31285.1| GTP-binding proten HflX [Thioalkalimicrobium cyclicum ALM1]
Length = 436
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/311 (41%), Positives = 184/311 (59%), Gaps = 34/311 (10%)
Query: 115 QNPSLKSGKARADT--FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
Q +K+ + R D + G G ++ + A + + D + N LS Q+RN+ER
Sbjct: 45 QAELIKTKRDRPDAKLYIGSGKLD----EVAAAVALHKADVVIFNHALSPGQERNIERVV 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DRVGLI++IF A + E KLQ ELA L + +RLVR G T
Sbjct: 101 KARVIDRVGLILDIFAQRARSHEGKLQVELAQLRHMSTRLVR----------GWTHLE-- 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GET+L+ +R + ER HLL +I++VR+ RA+ R +R+R S
Sbjct: 149 -----RQKGGIG-LRGPGETQLESDKRLLQERIKHLLKRIDKVRKQRALGRQSRQR---S 199
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
D T+ +VGYTNAGKSTL + L+ +D++++ RLFATLD L+SV LP G K +L+DT
Sbjct: 200 DH---PTITLVGYTNAGKSTLFNLLTAADVYAENRLFATLDATLRSVHLPGGGKAILADT 256
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFI +P LV AF +TLEE EADLL+H++D P ++ V QV+ +VG ++ +
Sbjct: 257 VGFIRHIPHDLVTAFRSTLEETSEADLLIHLVDAADPLRDDKIAQVEQVINEVGAAD--V 314
Query: 412 KNMIEVWNKID 422
+I V+NKID
Sbjct: 315 PQLI-VFNKID 324
>gi|54292974|ref|YP_125389.1| hypothetical protein lpl0010 [Legionella pneumophila str. Lens]
gi|53752806|emb|CAH14240.1| hypothetical protein lpl0010 [Legionella pneumophila str. Lens]
Length = 414
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/313 (41%), Positives = 180/313 (57%), Gaps = 36/313 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ + +LFATLDP ++ + LP S +L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEVWNKID 422
AF ATLEE +ADLL+HV+D + PN E TV +V Q + E K+ N+ I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPNWRE---TVFEV--QKVLDELKVNNIPVIQVFNKID 320
Query: 423 YHDEEMGDVEYID 435
+ ++Y +
Sbjct: 321 LQEGWQPKIDYTE 333
>gi|156743087|ref|YP_001433216.1| small GTP-binding protein [Roseiflexus castenholzii DSM 13941]
gi|156234415|gb|ABU59198.1| small GTP-binding protein [Roseiflexus castenholzii DSM 13941]
Length = 454
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 167/295 (56%), Gaps = 24/295 (8%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F GPG +E I D + + L+ Q RN+E A VLDR GLI++IF
Sbjct: 76 FIGPGKIE----EIAALRDTLHYDLVVFDDELTPAQARNVEDALQTRVLDRTGLILDIFA 131
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA T E ++Q ELA Y RL R + T E ++ G G RG
Sbjct: 132 RHAQTHEGRVQVELAQYRYLLPRLRR------QWTHLERQAGGGGASAGGVVGLRG---- 181
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I R L QIEEV R R V R RR+ G + VA+VGYTNA
Sbjct: 182 PGETQLEVDRRLIARRIQWLEQQIEEVHRHREVYRERRRQSG------IPVVAIVGYTNA 235
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ALS +++ ++ RLFATLDP + V LP G+ +LL+DTVGFI LP LV AF
Sbjct: 236 GKSTLLNALSGANVRAEDRLFATLDPTTRQVTLPGGQQILLTDTVGFIQKLPTHLVAAFR 295
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEE+ EAD+++HVLD T PN + TVL L+ + V + + + V NK+D
Sbjct: 296 ATLEEIREADVVLHVLDITHPNAAQQTQTVLDTLRDLQVED---RPTLTVLNKVD 347
>gi|386718074|ref|YP_006184400.1| GTP-binding protein HflX [Stenotrophomonas maltophilia D457]
gi|384077636|emb|CCH12225.1| GTP-binding protein HflX [Stenotrophomonas maltophilia D457]
Length = 436
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/319 (40%), Positives = 179/319 (56%), Gaps = 32/319 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 55 TLIGSGKLDEIKA---AADASGA-DLILVNHALSPGQERNLERFLERRVIDRTGLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH+ E KLQ ELA L + +RLVR G + RG G +
Sbjct: 111 AQRAHSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRG----GSIDLR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQRTQMRRARVRSE------LPRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +A++ ++ ++ +LFATLDP ++ + +P G V+L+DTVGF+ DLP LV AF
Sbjct: 208 AGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGGSVVLADTVGFVRDLPHDLVAAFR 267
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL E EAD L+HV+D P+ EE V +VL VG + L ++ V+NKID D
Sbjct: 268 STLSEAREADFLLHVVDAADPHREERIAQVDEVLTAVGAGD--LPQLL-VFNKIDRIDG- 323
Query: 428 MGDVEYIDGDDISNFSRAE 446
DV + D + + SR E
Sbjct: 324 -ADVRHDGQDGVPDESRRE 341
>gi|357384449|ref|YP_004899173.1| GTP-binding protein HflX [Pelagibacterium halotolerans B2]
gi|351593086|gb|AEQ51423.1| GTP-binding protein HflX [Pelagibacterium halotolerans B2]
Length = 451
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 177/296 (59%), Gaps = 29/296 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G V+ + A+ K +++ + V+A LS IQQRNLER G VLDR LI+EIF
Sbjct: 72 TYLGGGQVQQLA---EWAKEK-DIELLVVDAPLSPIQQRNLEREIGVKVLDRTALILEIF 127
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T+E LQ ELA L Y+K RLVR T E R GG GF+
Sbjct: 128 GERAATREGVLQVELAHLNYQKGRLVR------SWTHLE-----------RQRGGGGFLG 170
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR+I +R L ++++VRRTR +QR R D VA+VGYTN
Sbjct: 171 GPGETQIESDRRQIQDRILVLERRLDKVRRTRQLQRGPR------DSVPFPVVALVGYTN 224
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
AGKS+L +A++ S + ++ LFATLD ++ LP G+ ++LSDTVGFISDLP LV AF
Sbjct: 225 AGKSSLFNAITGSGVMAENLLFATLDTTVRRATLPHGRDIILSDTVGFISDLPTDLVAAF 284
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
TLEEV +A +++HV D + P+ VL VL +GV+ E +IEVWNKID
Sbjct: 285 RGTLEEVTQAQVILHVRDVSNPDHPAQANDVLSVLASLGVTGEA-TPIIEVWNKID 339
>gi|390347169|ref|XP_798244.3| PREDICTED: putative GTP-binding protein 6-like [Strongylocentrotus
purpuratus]
Length = 536
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 176/297 (59%), Gaps = 29/297 (9%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
FG GT E + I S+ ++ ++F+N LSG+Q++ +E WG PV DR ++++IF
Sbjct: 164 MFGQGTFEELTAQIR---SQPDITSVFLNVDRLSGVQKKTMEEEWGLPVYDRYEVVLQIF 220
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
HA +KEAKLQ LA L +++S L + ET + + + SG + +I
Sbjct: 221 KEHASSKEAKLQIALAELHFRRSHLHQ-----------ETFDLD------QQSGAQQYIG 263
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET L+ ++R++ ++ L +E+++ RA+ R R R + VAVVGYTN
Sbjct: 264 GGGETLLEKKQRQLRDKEGALRKALEKLKGKRALLRKGRER------KHFPHVAVVGYTN 317
Query: 308 AGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDA 365
AGK++L+ A++ D+ L +LFATLD + L + V+ DTVGFIS LP QL+ +
Sbjct: 318 AGKTSLIKAMTGDTRLEPRNQLFATLDVTSHAGYLSNRMPVIYIDTVGFISQLPHQLIAS 377
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
F ATLE+V+ ADLLVHV D + P E + V+ VL +GV++ L NMIEV NKID
Sbjct: 378 FAATLEDVLCADLLVHVRDVSHPESENQKIQVISVLHDLGVNQHLLDNMIEVNNKID 434
>gi|52840266|ref|YP_094065.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|378775971|ref|YP_005184397.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila
ATCC 43290]
gi|52627377|gb|AAU26118.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|364506774|gb|AEW50298.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila
ATCC 43290]
Length = 419
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/313 (41%), Positives = 180/313 (57%), Gaps = 36/313 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 59 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 114
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 115 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 156
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 157 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 210
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ + +LFATLDP ++ + LP S +L+DTVGFI DLP LV+
Sbjct: 211 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 270
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM--IEVWNKID 422
AF ATLEE +ADLL+HV+D + PN E TV +V Q + E K+ N+ I+V+NKID
Sbjct: 271 AFRATLEETQQADLLLHVIDISDPNWRE---TVFEV--QKVLDELKVNNIPVIQVFNKID 325
Query: 423 YHDEEMGDVEYID 435
+ ++Y +
Sbjct: 326 LQEGWQPKIDYTE 338
>gi|158320815|ref|YP_001513322.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs]
gi|158141014|gb|ABW19326.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs]
Length = 429
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 167/303 (55%), Gaps = 40/303 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE IK E+ + + N LSG Q RNLE G V+DR LI++IF
Sbjct: 64 FIGKGKVEEIKELCENLEA----NMVIFNDELSGSQIRNLEEEIGVDVIDRTALILDIFA 119
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A TKE KLQ ELA L Y+ RL+ G +S +G G G RG
Sbjct: 120 QRASTKEGKLQVELAQLKYRMPRLI--------------GLGRQLSQQGAGIGTRG---- 161
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE +L+ RR IL+R + S+++EVR+ R VQR R + + VA+VGYTNA
Sbjct: 162 PGEKKLETDRRHILKRIDDIESELKEVRKNREVQRGKRSK------SEIPIVALVGYTNA 215
Query: 309 GKSTLVSAL---SD-----SDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLP 359
GKSTL++ L SD +++ + LFATLD L+ + P +L+DTVGF+S LP
Sbjct: 216 GKSTLMNTLLKLSDHHDDTKEVYVEDMLFATLDVSLRRLSFPDKLDFILTDTVGFVSKLP 275
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV+AF ATLEEV ADLL+HV+D + + T L VL +GV KN+I V+N
Sbjct: 276 HALVNAFKATLEEVKYADLLIHVIDASNEEYNLQKDTTLGVLNDLGVEN---KNIITVYN 332
Query: 420 KID 422
KID
Sbjct: 333 KID 335
>gi|164687689|ref|ZP_02211717.1| hypothetical protein CLOBAR_01331 [Clostridium bartlettii DSM
16795]
gi|164603463|gb|EDQ96928.1| GTP-binding protein HflX [Clostridium bartlettii DSM 16795]
Length = 416
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 180/321 (56%), Gaps = 39/321 (12%)
Query: 121 SGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
S K + + G G ++ +K + + D + N LS Q +N+E V+DR
Sbjct: 46 SKKVNSTFYMGSGKIDELKNLV----EENNADIVIFNNELSASQVKNIEEEINCNVIDRT 101
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
LI++IF A T+E+KLQ E+A L Y+ RLV G + L GR S
Sbjct: 102 ALILDIFANRAKTRESKLQVEVAKLQYELPRLV---GSNEDL--------------GRQS 144
Query: 241 GGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG G + GAGET+L+L RRRI ++ ++L ++E ++ R VQ++ R++ +
Sbjct: 145 GGVGTKNRGAGETKLELDRRRIEDKIANLNKELEVLKNQREVQKSKRKKSN------IPN 198
Query: 300 VAVVGYTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
VA+VGYTNAGKS++++AL D +F LFATL+ ++++ L + K LLSDT
Sbjct: 199 VALVGYTNAGKSSVMNALVEKFINDEDKKVFEKNMLFATLETYVRNIKLDNNKSFLLSDT 258
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+ DLP LV AF +TLEEV +ADLL+HV+D + PN E H + L Q+G +
Sbjct: 259 VGFVGDLPHSLVKAFRSTLEEVCDADLLLHVIDISNPNYENHINVTNETLNQIGADNIPV 318
Query: 412 KNMIEVWNKIDYHDEEMGDVE 432
I V+NK+D + + ++E
Sbjct: 319 ---IYVYNKVDLMELDTFNIE 336
>gi|326390100|ref|ZP_08211661.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus JW 200]
gi|325993748|gb|EGD52179.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus JW 200]
Length = 413
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 177/296 (59%), Gaps = 34/296 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K AE++ E+D + VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELKFF---AENQ-EVDLVIVNDELTGTQIKNMEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE LQ ELA L Y+ RL + G RL G G
Sbjct: 114 KRAKSKEGMLQVELAQLKYRLPRLAGLGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE+ R R++QR R+++ + +A+VGYTNA
Sbjct: 156 PGETKLETDRRHIKNRIKAIEKKLEEIERHRSLQRERRKKNR------IPVIAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++AL++++++ + +LFATLDP + +VLPSG+ V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTNAEVYVENKLFATLDPTARRLVLPSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG-VSEEKLKNMIEVWNKID 422
+TLEEV ADLL+HV+D T+P++EE V +VL +G ++ K I V+NKID
Sbjct: 270 STLEEVKYADLLLHVIDVTSPDMEEKIKVVEKVLSDLGAINTPK----INVFNKID 321
>gi|429740715|ref|ZP_19274391.1| GTP-binding protein HflX [Porphyromonas catoniae F0037]
gi|429160251|gb|EKY02725.1| GTP-binding protein HflX [Porphyromonas catoniae F0037]
Length = 410
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 186/340 (54%), Gaps = 34/340 (10%)
Query: 84 ALCLANSLEEQRDGYFD-TDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI 142
L N E+Q Y D DF + VV+ + + TF G G +E I+ ++
Sbjct: 18 GLITRNQTEDQAKEYLDELDFLSRTAGVEPVVRFLQ-RLEQPHPVTFVGKGKLEEIRLYV 76
Query: 143 NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAEL 202
+ E+ + + L+ Q RN+E +LDR LI++IF A A T AK Q EL
Sbjct: 77 E----EQEIGLVIFDDELTPKQLRNIEAVLKVRILDRTSLILDIFAARATTAYAKTQVEL 132
Query: 203 AALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRIL 262
A Y RL R+ + R GG G + G GET+L+ +R I
Sbjct: 133 AQYRYMLPRLTRL-----------------WTHLERQRGGVG-MRGPGETQLETDKRLIQ 174
Query: 263 ERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDL 322
+R +HL +++ + R A+QR R + L VA+VGYTN GKSTL++ LS SD+
Sbjct: 175 DRIAHLKEELKGIDRQMAMQRKNRGK--------LVRVALVGYTNVGKSTLMNVLSKSDV 226
Query: 323 FSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 382
F++ +LFATLD ++ V++ + LLSDTVGFI LP +L+++F +TL+EV EADLLVHV
Sbjct: 227 FAENKLFATLDTTVRKVIVHNLPFLLSDTVGFIRKLPTELIESFKSTLDEVREADLLVHV 286
Query: 383 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+D + PN EEH V L+++ +E K+++ V+NKID
Sbjct: 287 VDISHPNFEEHIEVVSSTLREITAGDE--KSVLLVFNKID 324
>gi|392960682|ref|ZP_10326147.1| GTP-binding protein, HflX [Pelosinus fermentans DSM 17108]
gi|421054560|ref|ZP_15517528.1| GTP-binding proten HflX [Pelosinus fermentans B4]
gi|421059271|ref|ZP_15521882.1| GTP-binding protein, HflX [Pelosinus fermentans B3]
gi|421068476|ref|ZP_15529776.1| GTP-binding protein, HflX [Pelosinus fermentans A12]
gi|421071423|ref|ZP_15532542.1| GTP-binding proten HflX [Pelosinus fermentans A11]
gi|392440918|gb|EIW18578.1| GTP-binding proten HflX [Pelosinus fermentans B4]
gi|392442147|gb|EIW19738.1| GTP-binding protein, HflX [Pelosinus fermentans A12]
gi|392447097|gb|EIW24357.1| GTP-binding proten HflX [Pelosinus fermentans A11]
gi|392454579|gb|EIW31401.1| GTP-binding protein, HflX [Pelosinus fermentans DSM 17108]
gi|392459218|gb|EIW35649.1| GTP-binding protein, HflX [Pelosinus fermentans B3]
Length = 599
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 170/305 (55%), Gaps = 52/305 (17%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V+ I + ++ I + LS QQRNLE+A G VLDR LI++IF
Sbjct: 235 FIGRGKVQEISL----LRQEKNVNLIIFDDELSPAQQRNLEKALGIKVLDRTALILDIFA 290
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI-- 246
A + E KLQ ELA L Y RL GG+G +
Sbjct: 291 QRARSHEGKLQVELAQLRYNLPRL----------------------------GGQGLVLS 322
Query: 247 --------SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
G GET+L++ RRRI ER S + QIE +++ R + R R + +
Sbjct: 323 RLGGGIGTRGPGETKLEVDRRRIRERVSDITKQIEYIKKQRNLHRKRR------ETTRIP 376
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISD 357
T+A+VGYTNAGKSTL++ L+ S++ ++ +LFATLDP +++ L +G+ L++DTVGFI
Sbjct: 377 TIALVGYTNAGKSTLLNLLTASEVLAEDKLFATLDPTTRNITLTNGQQALITDTVGFIQK 436
Query: 358 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 417
LP QL+ AF ATLEEVV+AD+L+HV+D + P +E V QVL ++ V +K +I +
Sbjct: 437 LPHQLIAAFRATLEEVVQADILLHVVDVSHPQYQEQSHAVFQVLHELNVD---IKQLITI 493
Query: 418 WNKID 422
+NK D
Sbjct: 494 FNKAD 498
>gi|58582568|ref|YP_201584.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84624454|ref|YP_451826.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58427162|gb|AAW76199.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84368394|dbj|BAE69552.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 439
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/324 (40%), Positives = 181/324 (55%), Gaps = 32/324 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL +AL+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +L
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLPHEL 263
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKID
Sbjct: 264 VAAFRSTLSEARDADLLLHIVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKID 320
Query: 423 YHDEEMGDVEYIDGDDISNFSRAE 446
D +V + D I + +R E
Sbjct: 321 KIDG--AEVRHDAQDGIPDPARRE 342
>gi|307608760|emb|CBW98143.1| hypothetical protein LPW_00091 [Legionella pneumophila 130b]
Length = 414
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 177/311 (56%), Gaps = 32/311 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I +N ++ D + VN LS Q+RNLER +G V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAHLVNMLDA----DLVLVNHELSPSQERNLERLFGCRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIRYINKRLEKVRCSRDQNRQARRKAS------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ + +LFATLDP ++ + LP S +L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDLPHHLVE 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATLEE +ADLL+HV+D + PN E V +VL + V+ +I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDDLKVNN---IPVIQVFNKIDLQ 322
Query: 425 DEEMGDVEYID 435
+ ++Y +
Sbjct: 323 EGWQPKIDYTE 333
>gi|188575916|ref|YP_001912845.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520368|gb|ACD58313.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 428
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/324 (40%), Positives = 181/324 (55%), Gaps = 32/324 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLE+ + V+DR GL
Sbjct: 40 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLEKYLERRVIDRTGL 95
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 96 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 141
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 142 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 192
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL +AL+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +L
Sbjct: 193 VGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLPHEL 252
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKID
Sbjct: 253 VAAFRSTLSEARDADLLLHIVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKID 309
Query: 423 YHDEEMGDVEYIDGDDISNFSRAE 446
D +V + D I + +R E
Sbjct: 310 KIDG--AEVRHDAQDGIPDPARRE 331
>gi|289662674|ref|ZP_06484255.1| GTP-binding protein [Xanthomonas campestris pv. vasculorum NCPPB
702]
gi|289669638|ref|ZP_06490713.1| GTP-binding protein [Xanthomonas campestris pv. musacearum NCPPB
4381]
Length = 439
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 149/408 (36%), Positives = 211/408 (51%), Gaps = 46/408 (11%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL +AL+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +L
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLPHEL 263
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKID
Sbjct: 264 VAAFRSTLSEARDADLLLHIVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKID 320
Query: 423 YHDEEMGDVEYIDGDDISNFSRAEDKDTTS-EPVDVECIDNYGGDDAD-----------N 470
E +V + D I + +R E ++ + +E + + G D
Sbjct: 321 KI--EGAEVRHDAQDGIPDPARRERVWVSARDGRGLEELQHALGQRLDLRHLTGQLRLPP 378
Query: 471 NDGFVSEDLGE-SMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQP 517
+ G + L + + +N DGWLL D VE E A ED P
Sbjct: 379 SAGRLRSRLHQLEVVRNEQSDEDGWLLEVD-LPMVEAERLAAGEDGAP 425
>gi|213513263|ref|NP_001133555.1| GTP-binding protein 6 [Salmo salar]
gi|209154476|gb|ACI33470.1| GTP-binding protein 6 [Salmo salar]
Length = 565
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 191/366 (52%), Gaps = 40/366 (10%)
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
R+F+V P +K + L AN + E+ G +T L V+ L +
Sbjct: 141 RIFIVHPDVK-----WGSRKQYLTTANLMMEEAVGLVNT------LQNWSVIDKVILSTK 189
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERAWGKPVLDRVG 181
FG G +T+ I + A+FVN LS ++ E AWG V DR
Sbjct: 190 TPEKKMIFGKGNFQTLTERIRRTPG---ITAVFVNVERLSPASEKEFEEAWGVKVFDRYS 246
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
+++ IF +A TKEAKLQ LA + +SRL EV + +G G
Sbjct: 247 VVLHIFRCNARTKEAKLQVSLAEIPLLRSRL----------------RNEVANLDQQGGG 290
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
R +I G+GET +++Q+R + ER+ + S +E +RR R + R+ R+ R ++
Sbjct: 291 SR-YIMGSGETLMEVQQRVLQERKLKICSALEHLRRKRHLLRSQRKH------RDFPIIS 343
Query: 302 VVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLP 359
V+GYTN GK+TL+ AL+ D+ L +LFATLD + + LPS VL DT+GF+S LP
Sbjct: 344 VMGYTNCGKTTLIKALTGDAALQPRDQLFATLDVTVHAGTLPSHMSVLYVDTIGFLSQLP 403
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
QL+D+F ATLE+V +DL+VHV D + P + VL VL+ + + + L +++EV N
Sbjct: 404 HQLIDSFSATLEDVTHSDLIVHVRDISHPETVNQKENVLNVLRNLQIPDRLLSSIVEVHN 463
Query: 420 KIDYHD 425
KID D
Sbjct: 464 KIDLVD 469
>gi|300726794|ref|ZP_07060224.1| GTP-binding proten HflX [Prevotella bryantii B14]
gi|299775907|gb|EFI72487.1| GTP-binding proten HflX [Prevotella bryantii B14]
Length = 415
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/342 (37%), Positives = 187/342 (54%), Gaps = 21/342 (6%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
L N EE+ Y D F + V V+ + + T+ G G +E IK +I
Sbjct: 18 GLITPNQNEEKTKEYLDELEFLADTAGAVTVKRFTQRVNGPSQVTYVGKGKLEEIKQYIK 77
Query: 144 GAE-SKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAEL 202
E ++ E+ + + L+ Q RN+E G +LDR LI++IF A T AK Q EL
Sbjct: 78 DEEDNEREIGMVIFDDELTAKQIRNIEGELGVKILDRTSLILDIFAMRAQTANAKTQVEL 137
Query: 203 AALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRIL 262
A Y RL R+ E + + G G + G GET+L++ RR IL
Sbjct: 138 AQHRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIIL 188
Query: 263 ERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDL 322
+R + L ++EE+ R ++ QR R R L VA+VGYTN GKST ++ LS S++
Sbjct: 189 QRITLLKKRLEEIDRQQSTQRKNRGR--------LIRVALVGYTNVGKSTTMNLLSKSEV 240
Query: 323 FSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 382
F++ +LFATLD ++ VV+ + LL+DTVGFI LP LVD+F +TL+E EADLLVHV
Sbjct: 241 FAENKLFATLDTTVRKVVVKNLPFLLADTVGFIRKLPTDLVDSFKSTLDETREADLLVHV 300
Query: 383 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+D + P+ EE V Q L+ +G +++ +MI V+NKID +
Sbjct: 301 VDISHPDFEEQINVVEQTLKDIGCTDK--PSMI-VFNKIDNY 339
>gi|326798579|ref|YP_004316398.1| GTP-binding protein HflX [Sphingobacterium sp. 21]
gi|326549343|gb|ADZ77728.1| GTP-binding proten HflX [Sphingobacterium sp. 21]
Length = 400
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 182/340 (53%), Gaps = 33/340 (9%)
Query: 85 LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHING 144
+ N E+Q Y + F E + + + K TF G G ++ IK ++N
Sbjct: 21 IITPNETEDQEKEYLEELAFLVETAGGETINTFTQRMQKPDRATFVGSGKLDEIKAYVNA 80
Query: 145 AESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAA 204
E+ D + + LS Q RN+E +LDR LI++IF A T +AK Q ELA
Sbjct: 81 EEA----DIVVFDDELSPSQLRNIENELKIKILDRSNLILDIFANRAKTAQAKTQVELAQ 136
Query: 205 LMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILER 264
L Y RL R+ + R GG G + G GET+++ RR IL +
Sbjct: 137 LQYLLPRLTRMW-----------------THLERQKGGIG-MRGPGETQIESDRRMILNK 178
Query: 265 RSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFS 324
S L +++++ + QR R L VA+VGYTN GKST+++ +S S++F+
Sbjct: 179 ISLLKEKLKQIDKQNETQRKNRGE--------LIRVALVGYTNVGKSTIMNMISKSEVFA 230
Query: 325 DARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLD 384
+ +LFATLD ++ VV+ + LLSDTVGFI LP LV+ F +TL+EV EAD+LVHV+D
Sbjct: 231 ENKLFATLDTTVRKVVIDNLPFLLSDTVGFIRKLPHHLVECFKSTLDEVREADILVHVVD 290
Query: 385 CTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+ PN E+H TV + L+ +G + K +I V+NKID +
Sbjct: 291 ISHPNFEDHINTVNETLKDLGAID---KPVITVFNKIDAY 327
>gi|114327788|ref|YP_744945.1| GTP-binding protein HflX [Granulibacter bethesdensis CGDNIH1]
gi|114315962|gb|ABI62022.1| GTP-binding protein hflX [Granulibacter bethesdensis CGDNIH1]
Length = 460
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 138/330 (41%), Positives = 187/330 (56%), Gaps = 40/330 (12%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFVNAILSGIQQRNLER 170
VVV + L R T G G V+ + G G+ + + V+A L+ +QQRNLER
Sbjct: 64 VVVHSGVLPLRARRPSTLLGEGQVQ-----LTGQALAGQNITVVIVDAALTPVQQRNLER 118
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
AW V+DR GLI++IF A T+E LQ ELA L Y++SRLVR T E
Sbjct: 119 AWNTKVIDRTGLILDIFGERAATREGTLQVELAHLEYQRSRLVR------SWTHLE---- 168
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
R GG GF+ G GET+++ RR I +R L ++E+VRRTR + R AR+R
Sbjct: 169 -------RQRGGFGFLGGPGETQIEADRRLITDRIVKLKRELEQVRRTRGLHRTARQR-- 219
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL-KSVVLPSGKVLLS 349
VA+VGYTNAGKSTL +A++ S + + +LFATLDP + + +V+LS
Sbjct: 220 ----VPFPVVALVGYTNAGKSTLFNAMTGSTVLAKDQLFATLDPTMRGLRLRSGRRVILS 275
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGFIS+LP +L+ AF ATLEEV EAD+++HV D + P+ R V VL + V +
Sbjct: 276 DTVGFISELPTELIAAFRATLEEVAEADVILHVRDVSHPDTAAQRHDVQLVLDGM-VRDH 334
Query: 410 KL-----KNMIEVWNKIDYHDEEMGDVEYI 434
L MIEV NK D +G VE++
Sbjct: 335 DLDADWRGRMIEVLNKADL----LGGVEHV 360
>gi|427387278|ref|ZP_18883334.1| GTP-binding protein HflX [Bacteroides oleiciplenus YIT 12058]
gi|425725657|gb|EKU88527.1| GTP-binding protein HflX [Bacteroides oleiciplenus YIT 12058]
Length = 419
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 184/334 (55%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLDQAHSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + A+VGYTN GKSTL++ L+ S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------MIRAALVGYTNVGKSTLMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G + K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLADIGAAG---KPMILVFNKIDAY 339
>gi|256848283|ref|ZP_05553726.1| GTP-binding protein HflX [Lactobacillus coleohominis 101-4-CHN]
gi|256714881|gb|EEU29859.1| GTP-binding protein HflX [Lactobacillus coleohominis 101-4-CHN]
Length = 425
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 206/388 (53%), Gaps = 51/388 (13%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G ++ IK +I AE E + N LS Q NL G V+DR LI+E
Sbjct: 54 AATYFGSGKIDEIK-NIAAAE---EATTVITNDELSPSQLSNLNDEVGVRVIDRTALILE 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A TKEAK+Q ++A L Y+ RL + RL +TG GG GF
Sbjct: 110 IFAKRAQTKEAKIQVQIAKLEYQLPRLHT--AANQRLD-QQTG------------GGAGF 154
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ GAGET++++ RR I + SHL +++E+ ++ A +RA R D + T A+VG
Sbjct: 155 ANRGAGETKIEMDRRVIQKHISHLRHELKEINKSEATKRALR------DKSAIPTAALVG 208
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
YTNAGKSTL++ + + ++F LF+TLD ++ + LP K +LSDTVGF+S
Sbjct: 209 YTNAGKSTLMNKMIERYGISREKEVFEKDMLFSTLDTSVRQLTLPDQKRFILSDTVGFVS 268
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP L++AF +TL E +ADLL+ ++D + P+ +E T + L Q+G+ MI
Sbjct: 269 KLPTHLIEAFKSTLTEAAKADLLIQIIDYSDPHRDEMIKTTEKTLHQIGIDNIP---MIY 325
Query: 417 VWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN------ 470
V+NK D + E +E GDD S +DK S + ++ I ++ DD +
Sbjct: 326 VFNKADKTNFEYPTME---GDDHLVISAKDDK---SLDLFIKTIKDHLFDDYVDAKLLIP 379
Query: 471 -NDGFVSEDLGESMNKNHNDY-SDGWLL 496
DG V L E N DY +DG LL
Sbjct: 380 FTDGHVVSYLNEHANITDTDYQNDGTLL 407
>gi|358062786|ref|ZP_09149425.1| GTP-binding protein HflX [Clostridium hathewayi WAL-18680]
gi|356699001|gb|EHI60522.1| GTP-binding protein HflX [Clostridium hathewayi WAL-18680]
Length = 417
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 177/303 (58%), Gaps = 36/303 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G +E +K E ELDA + + LS Q RNLE+A V+DR +I++
Sbjct: 60 TYLGKGKIEEVK------ERIWELDATGVVCDDELSPAQLRNLEQALDTKVMDRTMVILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A+T E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 114 IFASRANTSEGKIQVELAQLKYRAARLVGLRSSLSRLGGGIGTRG--------------- 158
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +L++ RR I ER L +++ +V R R V R R ++ + A+VGY
Sbjct: 159 ---PGEKKLEMDRRLIHERIGQLKAELRDVERHRDVMRQQRSKNHTT------VAAIVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVD 364
TNAGKSTL++ L+D+ + ++ +LFATLDP +++ LPSG+ +LL+DTVGFI LP L++
Sbjct: 210 TNAGKSTLLNLLTDAGILAEDKLFATLDPTTRNLELPSGQQILLTDTVGFIRKLPHHLIE 269
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF +TLEE +D+++HV+DC+ P ++ TV + L+Q+ V+ K M+ ++NKID
Sbjct: 270 AFKSTLEEARYSDIILHVVDCSNPQMDMQMYTVYETLKQLEVTG---KIMVTIYNKIDKI 326
Query: 425 DEE 427
+EE
Sbjct: 327 EEE 329
>gi|374260547|ref|ZP_09619144.1| GTP binding protein HflX [Legionella drancourtii LLAP12]
gi|363539128|gb|EHL32525.1| GTP binding protein HflX [Legionella drancourtii LLAP12]
Length = 418
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 124/309 (40%), Positives = 179/309 (57%), Gaps = 32/309 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I + ++ + + VN LS Q+RNLER V+DR GLI++
Sbjct: 54 AKYYVGKGKAEEIAQLVKALDA----ELVLVNHELSPSQERNLERLLECRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER ++ ++E+VR +R R ARR+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKYINRRLEKVRCSRDQNRQARRKAA------MPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL+ ++ +LFATLDP ++ + LP V+L+DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNALTGERIYVANQLFATLDPTMRQLSLPGASGVILADTVGFIRDLPHHLVE 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATLEE +ADLL+HV+D + P+ + +V QVL ++GV++ +I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPHWRDTVFSVQQVLDELGVND---IPVIQVFNKIDLQ 322
Query: 425 DEEMGDVEY 433
+ ++Y
Sbjct: 323 EGWEAKIDY 331
>gi|189468235|ref|ZP_03017020.1| hypothetical protein BACINT_04631 [Bacteroides intestinalis DSM
17393]
gi|189436499|gb|EDV05484.1| GTP-binding protein HflX [Bacteroides intestinalis DSM 17393]
Length = 419
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 183/334 (54%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I E ++ E
Sbjct: 26 ERKTNEYLDELEFLAETAGAEVVKRFTQKLDQAHSVTYVGKGKLEEIKEYIRSEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R + A+VGYTN GKSTL++ L+ S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------MIRAALVGYTNVGKSTLMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G S K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLADIGASG---KPMILVFNKIDAY 339
>gi|384419692|ref|YP_005629052.1| GTP-binding protein [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353462605|gb|AEQ96884.1| GTP-binding protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 439
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 130/324 (40%), Positives = 181/324 (55%), Gaps = 32/324 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHVATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL +AL+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +L
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLPHEL 263
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E +ADLL+H++D P EE V +VLQ VG + L ++ V+NKID
Sbjct: 264 VAAFRSTLSEARDADLLLHIVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKID 320
Query: 423 YHDEEMGDVEYIDGDDISNFSRAE 446
D +V + D I + +R E
Sbjct: 321 KIDG--AEVRHDAQDGIPDPARRE 342
>gi|164687577|ref|ZP_02211605.1| hypothetical protein CLOBAR_01218 [Clostridium bartlettii DSM
16795]
gi|164603351|gb|EDQ96816.1| GTP-binding protein HflX [Clostridium bartlettii DSM 16795]
Length = 428
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 127/321 (39%), Positives = 175/321 (54%), Gaps = 48/321 (14%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLER 170
V+QN + A F G G VE I+ CH+ GA I N LSG RN+E
Sbjct: 50 VIQNKPARD----AAYFIGKGKVEEIRDYCHMLGA------TMIVFNDELSGAHMRNIED 99
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
G V+DR LI++IF A +KE KLQ ELA L Y RL R+ G G++
Sbjct: 100 VTGLKVIDRTALILDIFAQRALSKEGKLQVELAQLKY---RLPRLYGMGGQM-------- 148
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
S G G G RG GE +L++ +R IL R + + ++ EV++ R QR R +
Sbjct: 149 ---SRTGAGIGTRG----PGEQKLEVDKRHILNRAADIRKELREVKQNRETQRVQRLKSN 201
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLP 342
+ VA+VGYTNAGKSTL++ L ++ ++F LFATLD L+ LP
Sbjct: 202 ------IPIVALVGYTNAGKSTLLNELIKTHKDYETEKEVFVKDMLFATLDVTLRKATLP 255
Query: 343 SGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVL 401
+ + L+ DTVGF+S LP LV+AF ATLEEV ADL++HV+D T + E + T VL
Sbjct: 256 NKRDFLVVDTVGFVSKLPHDLVEAFKATLEEVKYADLILHVIDATNSSFELQKQTTESVL 315
Query: 402 QQVGVSEEKLKNMIEVWNKID 422
+++G ++K I V+NKID
Sbjct: 316 KELGADDKK---TIIVYNKID 333
>gi|319901061|ref|YP_004160789.1| GTP-binding proten HflX [Bacteroides helcogenes P 36-108]
gi|319416092|gb|ADV43203.1| GTP-binding proten HflX [Bacteroides helcogenes P 36-108]
Length = 418
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 184/334 (55%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K +A + T+ G G + IK +I N E++ E
Sbjct: 26 ERRTNEYLDELAFLAETAGAEVVKRFTQKLDQANSVTYVGTGKLAEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ R ++ QR R R + VA+VGYTN GKSTL++ L+ S++F++ +LFA
Sbjct: 197 RLAEIDRQKSTQRKNRGR--------MIRVALVGYTNVGKSTLMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVIIENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G + K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLADIGAAG---KPMILVFNKIDAY 339
>gi|256821744|ref|YP_003145707.1| GTP-binding proten HflX [Kangiella koreensis DSM 16069]
gi|256795283|gb|ACV25939.1| GTP-binding proten HflX [Kangiella koreensis DSM 16069]
Length = 433
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/311 (39%), Positives = 181/311 (58%), Gaps = 35/311 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G ++ IK + + + I N LS Q+RN+ERA V+DR+GLI++IF
Sbjct: 61 FIGSGKIDEIKS----VKQATDANVIIFNHNLSPAQERNIERAVEARVIDRIGLILDIFA 116
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 117 QRASTFEGKLQVELAQLRHLSTRLIR----------GWTHLE-------RQKGGIG-LRG 158
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER ++ ++E+V + R R +R+R + TV++VGYTNA
Sbjct: 159 PGETQLETDRRLLRERLKYIDKRLEKVSKQREQGRRSRKRAN------IKTVSIVGYTNA 212
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ + + ++ +LFATLDP L+ + LP G V+++DTVGFI LP +LV AF
Sbjct: 213 GKSTLFNYLTTAGVLAEDKLFATLDPTLRRISLPQGTDVIIADTVGFIRHLPHELVAAFR 272
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
ATLEE VEAD+L+HV+D + +E+ V +VL ++G E + + E++NKID +
Sbjct: 273 ATLEESVEADVLLHVIDAASDRRDENMEQVEEVLTEIGA--ETIPRL-EIYNKIDLIE-- 327
Query: 428 MGDVEYIDGDD 438
G +ID DD
Sbjct: 328 -GAEPHIDRDD 337
>gi|78047325|ref|YP_363500.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|294665636|ref|ZP_06730913.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|78035755|emb|CAJ23446.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|292604582|gb|EFF47956.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 439
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 180/324 (55%), Gaps = 32/324 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +L
Sbjct: 204 VGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLPHEL 263
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKID
Sbjct: 264 VAAFRSTLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKID 320
Query: 423 YHDEEMGDVEYIDGDDISNFSRAE 446
E +V + D I + +R E
Sbjct: 321 KI--EGAEVRHDAQDGIPDPARRE 342
>gi|298207488|ref|YP_003715667.1| GTP-binding protein HflX [Croceibacter atlanticus HTCC2559]
gi|83850124|gb|EAP87992.1| GTP-binding protein HflX [Croceibacter atlanticus HTCC2559]
Length = 407
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 135/356 (37%), Positives = 195/356 (54%), Gaps = 33/356 (9%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EEQ Y D F V++ + K TF G +ET++ I E
Sbjct: 24 EEQSKEYLDELEFLTYTAGGEVLKRFTQKLEHPNPKTFINSGKLETVRQFIEEHEVGS-- 81
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
AIF + LS QQ+NLER V+DR LI++IF A T A+ Q ELA Y R
Sbjct: 82 -AIFDDE-LSPAQQKNLERILKCKVVDRTYLILDIFAQRATTSYARTQVELAQYEYLLPR 139
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
LV G T E R GG G + G GETE++ RR + ++ S L ++
Sbjct: 140 LV------GLWTHLE-----------RQRGGIG-MRGPGETEIETDRRIVRDKISLLKNK 181
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
I+++ + VQR R + L VA+VGYTN GKSTL++A+S S++F++ +LFAT
Sbjct: 182 IKKIDKQMEVQRGNRGQ--------LVRVALVGYTNVGKSTLMNAISKSEVFAENKLFAT 233
Query: 332 LDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLE 391
LD ++ VV+ + LL+DTVGFI LP QLV++F +TL+EV EADLL+HV+D + N E
Sbjct: 234 LDTTVRKVVIRNLPFLLTDTVGFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHHNFE 293
Query: 392 EHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAED 447
EH +V Q+L ++ ++ K I V+NKID ++ E D + +D + + + ED
Sbjct: 294 EHIASVNQILDEIDSAD---KPSIMVFNKIDAYEPETIDEDDLDTEKTTKHNTLED 346
>gi|384097317|ref|ZP_09998438.1| GTP-binding protein HflX [Imtechella halotolerans K1]
gi|383837285|gb|EID76685.1| GTP-binding protein HflX [Imtechella halotolerans K1]
Length = 407
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 182/327 (55%), Gaps = 38/327 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V+Q + K TF G G +E ++ +N + E+ + + LS QQ+N+ER
Sbjct: 45 VIQRFTQKIDVPNPKTFIGTGKMEEVEIFVN----EHEVGTVIFDDELSPAQQKNIERIL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 KCKILDRTSLILDIFAQRAQTSYARTQVELAQYQYLLPRLT------GLWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + +R + L ++E + + A QR+ R
Sbjct: 149 -----RQRGGIG-MRGPGETEIETDRRIVRDRIALLKKKLETIDKQMATQRSNRG----- 197
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTV 352
L VA+VGYTN GKSTL++ ++ S++F++ +LFATLD ++ VV+ + LLSDTV
Sbjct: 198 ---ALVRVALVGYTNVGKSTLMNVIAKSEVFAENKLFATLDTTVRKVVIGNLPFLLSDTV 254
Query: 353 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 412
GFI LP QLV++F +TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K
Sbjct: 255 GFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHPNFEEHIHSVNQILTEIKSAD---K 311
Query: 413 NMIEVWNKIDYHDEEMGDVEYIDGDDI 439
I V+NKID ++ ID DD+
Sbjct: 312 PTIMVFNKIDAYEHLA-----IDEDDL 333
>gi|167040081|ref|YP_001663066.1| small GTP-binding protein [Thermoanaerobacter sp. X514]
gi|256752602|ref|ZP_05493456.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus CCSD1]
gi|300914164|ref|ZP_07131480.1| GTP-binding proten HflX [Thermoanaerobacter sp. X561]
gi|307724600|ref|YP_003904351.1| GTP-binding proten HflX [Thermoanaerobacter sp. X513]
gi|166854321|gb|ABY92730.1| small GTP-binding protein [Thermoanaerobacter sp. X514]
gi|256748540|gb|EEU61590.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus CCSD1]
gi|300889099|gb|EFK84245.1| GTP-binding proten HflX [Thermoanaerobacter sp. X561]
gi|307581661|gb|ADN55060.1| GTP-binding proten HflX [Thermoanaerobacter sp. X513]
Length = 413
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 172/298 (57%), Gaps = 32/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K + E +D + VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELKFFVENQE----VDLVIVNDELTGTQIKNIEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A ++E LQ ELA L Y+ RLV + G RL G G
Sbjct: 114 KRAKSREGMLQVELAQLKYRLPRLVGLGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE+ R R++QR R+++ + +A+VGYTNA
Sbjct: 156 PGETKLETDRRHIKNRIKAIEKKLEEIERHRSLQRERRKKNR------IPVIAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++AL++++++ + +LFATLDP + +VLPSG+ V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTNAEVYVEDKLFATLDPTARRLVLPSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
+TLEE ADLL+HV+D T+P++EE V +VL + V I V+NKID D
Sbjct: 270 STLEEAKYADLLLHVIDVTSPDMEEKIKVVEKVLSDLDVINTP---RINVFNKIDLLD 324
>gi|346724666|ref|YP_004851335.1| GTP-binding protein [Xanthomonas axonopodis pv. citrumelo F1]
gi|346649413|gb|AEO42037.1| GTP-binding protein [Xanthomonas axonopodis pv. citrumelo F1]
Length = 439
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 180/324 (55%), Gaps = 32/324 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +L
Sbjct: 204 VGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLPHEL 263
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKID
Sbjct: 264 VAAFRSTLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKID 320
Query: 423 YHDEEMGDVEYIDGDDISNFSRAE 446
E +V + D I + +R E
Sbjct: 321 KI--EGAEVRHDAQDGIPDPARRE 342
>gi|163795484|ref|ZP_02189450.1| putative gtp-binding protein [alpha proteobacterium BAL199]
gi|159179083|gb|EDP63616.1| putative gtp-binding protein [alpha proteobacterium BAL199]
Length = 437
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 178/302 (58%), Gaps = 29/302 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K R + G G +E I + E ++ + V+ L+ +QQRNLE+ V+DR L
Sbjct: 54 KPRPGSLLGGGQIERIAQLVEALE----IEVVVVDRPLTPVQQRNLEKELDAKVIDRTQL 109
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A A T E +L +LA+L +++SRLVR T E R GG
Sbjct: 110 ILEIFGARARTHEGRLHVDLASLTFQRSRLVR------SWTHLE-----------RQRGG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
GF+ G GE +L++ RR I ++ + ++EEV+RTR + R ARRR VA+
Sbjct: 153 GGFMGGPGERQLEIDRRLIDDKIIRIRRELEEVKRTRELHRGARRRVP------YPIVAL 206
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQ 361
VGYTNAGKSTL + LS + + ++ LFATLDP ++ + +P G+ ++LSDTVGFISDLP
Sbjct: 207 VGYTNAGKSTLFNRLSGASVVAEDLLFATLDPTMRRIEVPGGRTIILSDTVGFISDLPTH 266
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-EKLKNMIEVWNK 420
LV AF ATLEEV EAD++VHV D P+ ++ V VL +G+ E + M+EV NK
Sbjct: 267 LVAAFRATLEEVTEADVVVHVRDIAHPDSNAQKSDVEGVLASLGIDETTRSGRMLEVLNK 326
Query: 421 ID 422
ID
Sbjct: 327 ID 328
>gi|381152753|ref|ZP_09864622.1| GTP-binding protein HflX [Methylomicrobium album BG8]
gi|380884725|gb|EIC30602.1| GTP-binding protein HflX [Methylomicrobium album BG8]
Length = 422
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 188/330 (56%), Gaps = 35/330 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V+ IK I + D + N L+ Q+RNLE A G V+DR GLI++IF
Sbjct: 55 FVGSGKVDEIKQAIADHVA----DIVLFNHPLTPSQERNLESALGVRVVDRNGLILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 111 QRAQTFEGKLQVELAQLKHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 152
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I +R + S++E+V + R R RR+ + TV++VGYTNA
Sbjct: 153 PGETQLETDRRLIGDRIKQIQSRLEKVEKQRHQSRGKRRK------AEIPTVSLVGYTNA 206
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ +++++ +LFATLDP L++ LP+ ++L+DTVGFI LP +LV AF
Sbjct: 207 GKSTLFNRLTGANIYAADQLFATLDPTLRNCRLPNNSAIVLADTVGFIRHLPHELVAAFK 266
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+E EADLL+HV+D A + +E T V QVL+++G +K++ + E++NKID D
Sbjct: 267 STLQEASEADLLLHVIDAHAEDRDETITQVNQVLKEIGA--DKIRQL-EIYNKIDLLD-- 321
Query: 428 MGDVEYIDGDDISNFSRAEDKDTTSEPVDV 457
G ID D+ R TT E D+
Sbjct: 322 -GGRPRIDRDETGRPVRVWLSATTGEGADL 350
>gi|21242485|ref|NP_642067.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306]
gi|381169483|ref|ZP_09878648.1| GTP-binding protein HflX [Xanthomonas citri pv. mangiferaeindicae
LMG 941]
gi|418517991|ref|ZP_13084146.1| GTP-binding protein [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|21107933|gb|AAM36603.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306]
gi|380690073|emb|CCG35135.1| GTP-binding protein HflX [Xanthomonas citri pv. mangiferaeindicae
LMG 941]
gi|410705352|gb|EKQ63827.1| GTP-binding protein [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 439
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 170/300 (56%), Gaps = 30/300 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +L
Sbjct: 204 VGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLPHEL 263
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKID
Sbjct: 264 VAAFRSTLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKID 320
>gi|160885086|ref|ZP_02066089.1| hypothetical protein BACOVA_03084 [Bacteroides ovatus ATCC 8483]
gi|293368751|ref|ZP_06615355.1| GTP-binding protein HflX [Bacteroides ovatus SD CMC 3f]
gi|423292207|ref|ZP_17270817.1| GTP-binding protein HflX [Bacteroides ovatus CL02T12C04]
gi|156109436|gb|EDO11181.1| GTP-binding protein HflX [Bacteroides ovatus ATCC 8483]
gi|292636056|gb|EFF54544.1| GTP-binding protein HflX [Bacteroides ovatus SD CMC 3f]
gi|392662216|gb|EIY55781.1| GTP-binding protein HflX [Bacteroides ovatus CL02T12C04]
Length = 419
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 184/334 (55%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F E VV+ + K A + T+ G G +E I+ +I+ E ++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIRQYIHDEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTMMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LV++F +TL+EV EADLLVHV+D + P
Sbjct: 249 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVESFKSTLDEVREADLLVHVVDISHPGF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L ++G S K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLAEIGGSG---KPMILVFNKIDAY 339
>gi|418519792|ref|ZP_13085843.1| GTP-binding protein [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410704452|gb|EKQ62934.1| GTP-binding protein [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
Length = 439
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 169/295 (57%), Gaps = 30/295 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GLI++IF
Sbjct: 56 TLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 112 AQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG---LR 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R R AR R L +A+VGYTN
Sbjct: 155 GPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +LV AF
Sbjct: 209 AGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLPHELVAAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKID
Sbjct: 269 STLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKID 320
>gi|393771693|ref|ZP_10360162.1| GTP-binding protein HflX [Novosphingobium sp. Rr 2-17]
gi|392722945|gb|EIZ80341.1| GTP-binding protein HflX [Novosphingobium sp. Rr 2-17]
Length = 447
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 135/328 (41%), Positives = 180/328 (54%), Gaps = 45/328 (13%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLE 169
VV ++ + RA T FG G +E I C N AE + V+ L+ IQQRNLE
Sbjct: 47 VVADAITIPIREPRAGTLFGEGQIENIAIGCTQNDAE------LVIVDGALTAIQQRNLE 100
Query: 170 RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGE 229
+ V+DR GLI+EIF A T E +LQ ELA L Y+ RLVR T E
Sbjct: 101 EKLKRKVIDRTGLILEIFGERAATAEGRLQVELAHLDYQAGRLVR------SWTHLE--- 151
Query: 230 AEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
R GG GF+ G GET+++ RR I +R + + ++E+VRRTR + R R +
Sbjct: 152 --------RQRGGFGFLGGPGETQIEADRRLIRDRMAKIRRELEQVRRTRGLHRERREKA 203
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLL 348
+A+VGYTNAGKSTL + L+ + + + LFATLDP ++++ LP K +L
Sbjct: 204 P------WPVIALVGYTNAGKSTLFNRLTGASVMAQDLLFATLDPTMRAIRLPGVEKGIL 257
Query: 349 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV-- 406
SDTVGFISDLP QLV AF ATLEEV AD+++HV D + + + VL VL +GV
Sbjct: 258 SDTVGFISDLPTQLVAAFRATLEEVTAADVILHVRDIANADTDVQKRQVLDVLADLGVVP 317
Query: 407 -----------SEEKLKNMIEVWNKIDY 423
+ E L +IEVWNK D
Sbjct: 318 GEADLKKTTETASEPLIPIIEVWNKWDL 345
>gi|421076028|ref|ZP_15537030.1| GTP-binding protein, HflX [Pelosinus fermentans JBW45]
gi|392525887|gb|EIW49011.1| GTP-binding protein, HflX [Pelosinus fermentans JBW45]
Length = 599
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 170/305 (55%), Gaps = 52/305 (17%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V+ I + + I + LS QQRNLE+A G VLDR LI++IF
Sbjct: 235 FIGRGKVQEISL----LRQEKNANLIIFDDELSPAQQRNLEKALGIKVLDRTALILDIFA 290
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI-- 246
A + E KLQ ELA L Y RL GG+G +
Sbjct: 291 QRARSHEGKLQVELAQLRYNLPRL----------------------------GGQGLVLS 322
Query: 247 --------SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
G GET+L++ RRRI ER + + QIE +++ R + R R + +
Sbjct: 323 RLGGGIGTRGPGETKLEVDRRRIRERVNDITRQIEYIKKQRNLHRKRR------ETTRIP 376
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISD 357
T+A+VGYTNAGKSTL++ L+ S++ ++ +LFATLDP +++ L +G+ L++DTVGFI
Sbjct: 377 TIALVGYTNAGKSTLLNLLTASEVLAEDKLFATLDPTTRNITLANGQQALITDTVGFIQK 436
Query: 358 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 417
LP QL+ AF ATLEEVV+AD+L+HV+D + P +E V QVL ++ V +K +I +
Sbjct: 437 LPHQLIAAFRATLEEVVQADILLHVVDVSHPQYQEQSHAVFQVLHELNVD---IKQLITI 493
Query: 418 WNKID 422
+NK+D
Sbjct: 494 FNKVD 498
>gi|373501011|ref|ZP_09591379.1| GTP-binding protein HflX [Prevotella micans F0438]
gi|371950863|gb|EHO68715.1| GTP-binding protein HflX [Prevotella micans F0438]
Length = 415
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 180/329 (54%), Gaps = 22/329 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + G A T+ G G +E IK I E + E + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVGGPSAVTYVGKGKLEEIKNFIKLKEDEEEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E G +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQLRNIENELGIKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R L VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKITQRKNRGR--------LIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+H++D + P+ EE
Sbjct: 255 RKVVVENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDFEEQIQV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
V Q L + SE K M+ V+NKID YH
Sbjct: 315 VNQTLTDLDSSE---KPMMIVFNKIDNYH 340
>gi|294626633|ref|ZP_06705230.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292599053|gb|EFF43193.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 439
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 179/324 (55%), Gaps = 32/324 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + R L ++E+V R R AR R L +A+
Sbjct: 153 ---LRGPGETQLETDRRLLQRRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +L
Sbjct: 204 VGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLPHEL 263
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKID
Sbjct: 264 VAAFRSTLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKID 320
Query: 423 YHDEEMGDVEYIDGDDISNFSRAE 446
E +V + D I + +R E
Sbjct: 321 KI--EGAEVRHDAQDGIPDPARRE 342
>gi|167037414|ref|YP_001664992.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115827|ref|YP_004185986.1| GTP-binding proten HflX [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856248|gb|ABY94656.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928918|gb|ADV79603.1| GTP-binding proten HflX [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 413
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 172/298 (57%), Gaps = 32/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K + E +D + VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELKFFVENQE----VDLVIVNDELTGTQIKNIEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A ++E LQ ELA L Y+ RLV + G RL G G
Sbjct: 114 KRAKSREGMLQVELAQLKYRLPRLVGLGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE+ R R++QR R+++ + +A+VGYTNA
Sbjct: 156 PGETKLETDRRHIKNRIKAIEKKLEEIERHRSLQRERRKKNR------IPVIAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++AL++++++ + +LFATLDP + +VLPSG+ V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTNAEVYVEDKLFATLDPTARRLVLPSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
+TLEE ADLL+HV+D T+P++EE V +VL + V I V+NKID D
Sbjct: 270 STLEEAKYADLLLHVIDVTSPDMEEKIKVVEKVLSDLDVINTP---RINVFNKIDLLD 324
>gi|255654837|ref|ZP_05400246.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-23m63]
gi|296449580|ref|ZP_06891357.1| GTP-binding protein HflX [Clostridium difficile NAP08]
gi|296878097|ref|ZP_06902112.1| GTP-binding protein HflX [Clostridium difficile NAP07]
gi|296261644|gb|EFH08462.1| GTP-binding protein HflX [Clostridium difficile NAP08]
gi|296430850|gb|EFH16682.1| GTP-binding protein HflX [Clostridium difficile NAP07]
Length = 427
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 176/308 (57%), Gaps = 44/308 (14%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFV--NAILSGIQQRNLERAWGKPVLDRVGLI 183
A + G G VE I+ + + LDA V N LSG Q RN+E G+ V+DR LI
Sbjct: 58 AAYYIGKGKVEEIRAYSDS------LDATLVIFNDELSGAQIRNIENVVGRKVIDRTTLI 111
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A +KE KLQ ELA L Y+ RL +G GE +S G G G R
Sbjct: 112 LDIFAQRALSKEGKLQVELAQLKYRLPRL-----------YGMGGE---MSRTGAGIGTR 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G GE +L++ +R IL + + + +++EV++ R QR R + + VA+V
Sbjct: 158 G----PGEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSN------IPIVALV 207
Query: 304 GYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGF 354
GYTNAGKSTL++ L + ++F LFATLD L+ +LP+ K L+ DTVGF
Sbjct: 208 GYTNAGKSTLLNELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGF 267
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+S LP LV+AF ATLEEV ADL++HV+D T + E ++T VL+++GV+++K
Sbjct: 268 VSKLPHDLVEAFKATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDKK---H 324
Query: 415 IEVWNKID 422
I V+NK+D
Sbjct: 325 ILVYNKVD 332
>gi|210623986|ref|ZP_03294137.1| hypothetical protein CLOHIR_02089, partial [Clostridium hiranonis
DSM 13275]
gi|210153263|gb|EEA84269.1| hypothetical protein CLOHIR_02089 [Clostridium hiranonis DSM 13275]
Length = 369
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 118/319 (36%), Positives = 179/319 (56%), Gaps = 39/319 (12%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K + + G G ++ +K + + D + N LS Q +N+E V+DR L
Sbjct: 1 KVNSTFYMGSGKIDELKNLV----EENNADIVIFNNELSASQVKNIEEEINCNVIDRTAL 56
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A T+E+KLQ E+A L Y+ RLV G + L GR SGG
Sbjct: 57 ILDIFANRAKTRESKLQVEVAKLQYELPRLV---GSNEDL--------------GRQSGG 99
Query: 243 RGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G + GAGET+L+L RRRI ++ ++L ++E ++ R VQ++ R++ + VA
Sbjct: 100 VGTKNRGAGETKLELDRRRIEDKIANLNKELEVLKNQREVQKSKRKKSN------IPNVA 153
Query: 302 VVGYTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVG 353
+VGYTNAGKS++++AL D +F LFATL+ ++++ L + K LLSDTVG
Sbjct: 154 LVGYTNAGKSSVMNALVEKFINDEDKKVFEKNMLFATLETYVRNIKLDNNKSFLLSDTVG 213
Query: 354 FISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN 413
F+ DLP LV AF +TLEEV +ADLL+HV+D + PN E H + L Q+G
Sbjct: 214 FVGDLPHSLVKAFRSTLEEVCDADLLLHVIDISNPNYENHINVTNETLNQIGADNIP--- 270
Query: 414 MIEVWNKIDYHDEEMGDVE 432
+I V+NK+D + + ++E
Sbjct: 271 VIYVYNKVDLMELDTFNIE 289
>gi|254974410|ref|ZP_05270882.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-66c26]
gi|255091801|ref|ZP_05321279.1| putative ATP/GTP-binding protein [Clostridium difficile CIP 107932]
gi|255313536|ref|ZP_05355119.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-76w55]
gi|255516221|ref|ZP_05383897.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-97b34]
gi|255649318|ref|ZP_05396220.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-37x79]
gi|260682488|ref|YP_003213773.1| ATP/GTP-binding protein [Clostridium difficile CD196]
gi|260686087|ref|YP_003217220.1| ATP/GTP-binding protein [Clostridium difficile R20291]
gi|306519413|ref|ZP_07405760.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-32g58]
gi|384360067|ref|YP_006197919.1| ATP/GTP-binding protein [Clostridium difficile BI1]
gi|260208651|emb|CBA61408.1| putative ATP/GTP-binding protein [Clostridium difficile CD196]
gi|260212103|emb|CBE02716.1| putative ATP/GTP-binding protein [Clostridium difficile R20291]
Length = 427
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 176/308 (57%), Gaps = 44/308 (14%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFV--NAILSGIQQRNLERAWGKPVLDRVGLI 183
A + G G VE I+ + + LDA V N LSG Q RN+E G+ V+DR LI
Sbjct: 58 AAYYIGKGKVEEIRAYSDS------LDATLVIFNDELSGAQIRNIENVVGRKVIDRTTLI 111
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A +KE KLQ ELA L Y+ RL +G GE +S G G G R
Sbjct: 112 LDIFAQRALSKEGKLQVELAQLKYRLPRL-----------YGMGGE---MSRTGAGIGTR 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G GE +L++ +R IL + + + +++EV++ R QR R + + VA+V
Sbjct: 158 G----PGEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSN------IPIVALV 207
Query: 304 GYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGF 354
GYTNAGKSTL++ L + ++F LFATLD L+ +LP+ K L+ DTVGF
Sbjct: 208 GYTNAGKSTLLNELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGF 267
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+S LP LV+AF ATLEEV ADL++HV+D T + E ++T VL+++GV+++K
Sbjct: 268 VSKLPHDLVEAFKATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDKK---H 324
Query: 415 IEVWNKID 422
I V+NK+D
Sbjct: 325 ILVYNKVD 332
>gi|237718237|ref|ZP_04548718.1| GTP-binding protein [Bacteroides sp. 2_2_4]
gi|299147788|ref|ZP_07040851.1| GTP-binding protein HflX [Bacteroides sp. 3_1_23]
gi|423297074|ref|ZP_17275144.1| GTP-binding protein HflX [Bacteroides ovatus CL03T12C18]
gi|229452421|gb|EEO58212.1| GTP-binding protein [Bacteroides sp. 2_2_4]
gi|298513971|gb|EFI37857.1| GTP-binding protein HflX [Bacteroides sp. 3_1_23]
gi|392668355|gb|EIY61855.1| GTP-binding protein HflX [Bacteroides ovatus CL03T12C18]
Length = 420
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 184/334 (55%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F E VV+ + K A + T+ G G +E I+ +I+ E ++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIRQYIHDEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTMMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LV++F +TL+EV EADLLVHV+D + P
Sbjct: 249 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVESFKSTLDEVREADLLVHVVDISHPGF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L ++G S K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLAEIGGSG---KPMILVFNKIDAY 339
>gi|126698368|ref|YP_001087265.1| GTP-binding protein, HflX type [Clostridium difficile 630]
gi|255099903|ref|ZP_05328880.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-63q42]
gi|255305792|ref|ZP_05349964.1| putative ATP/GTP-binding protein [Clostridium difficile ATCC 43255]
gi|115249805|emb|CAJ67622.1| putative GTP-binding protein, HflX type [Clostridium difficile 630]
Length = 427
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 176/308 (57%), Gaps = 44/308 (14%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFV--NAILSGIQQRNLERAWGKPVLDRVGLI 183
A + G G VE I+ + + LDA V N LSG Q RN+E G+ V+DR LI
Sbjct: 58 AAYYIGKGKVEEIRAYSDS------LDATLVIFNDELSGAQIRNIENVVGRKVIDRTTLI 111
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A +KE KLQ ELA L Y+ RL +G GE +S G G G R
Sbjct: 112 LDIFAQRALSKEGKLQVELAQLKYRLPRL-----------YGMGGE---MSRTGAGIGTR 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G GE +L++ +R IL + + + +++EV++ R QR R + + VA+V
Sbjct: 158 G----PGEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSN------IPIVALV 207
Query: 304 GYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGF 354
GYTNAGKSTL++ L + ++F LFATLD L+ +LP+ K L+ DTVGF
Sbjct: 208 GYTNAGKSTLLNELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGF 267
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+S LP LV+AF ATLEEV ADL++HV+D T + E ++T VL+++GV+++K
Sbjct: 268 VSKLPHDLVEAFKATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDKK---H 324
Query: 415 IEVWNKID 422
I V+NK+D
Sbjct: 325 ILVYNKVD 332
>gi|390989118|ref|ZP_10259418.1| GTP-binding protein HflX [Xanthomonas axonopodis pv. punicae str.
LMG 859]
gi|372556152|emb|CCF66393.1| GTP-binding protein HflX [Xanthomonas axonopodis pv. punicae str.
LMG 859]
Length = 429
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 170/300 (56%), Gaps = 30/300 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GL
Sbjct: 40 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGL 95
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 96 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 141
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 142 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 192
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +L
Sbjct: 193 VGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLPHEL 252
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKID
Sbjct: 253 VAAFRSTLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKID 309
>gi|325927205|ref|ZP_08188466.1| GTP-binding proten HflX [Xanthomonas perforans 91-118]
gi|325542433|gb|EGD13914.1| GTP-binding proten HflX [Xanthomonas perforans 91-118]
Length = 413
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 180/324 (55%), Gaps = 32/324 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D + VN LS Q+RNLER + V+DR GL
Sbjct: 25 KPSPSTLIGSGKLEEVKA---AAEATGA-DLVLVNHTLSPGQERNLERYLERRVIDRTGL 80
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 81 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 126
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R R AR R L +A+
Sbjct: 127 ---LRGPGETQLETDRRLLQKRVEQLQQRLEKVEVQRTQMRRARMRSE------LPRIAL 177
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL + L+ ++ + +LFATLDP ++ + LP G +L+DTVGF+ DLP +L
Sbjct: 178 VGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLPHEL 237
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E +ADLL+HV+D P EE V +VLQ VG + L ++ V+NKID
Sbjct: 238 VAAFRSTLSEARDADLLLHVVDAADPLREERILQVDEVLQAVGAGD--LPQLL-VFNKID 294
Query: 423 YHDEEMGDVEYIDGDDISNFSRAE 446
E +V + D I + +R E
Sbjct: 295 KI--EGAEVRHDAQDGIPDPARRE 316
>gi|423090444|ref|ZP_17078743.1| GTP-binding protein HflX [Clostridium difficile 70-100-2010]
gi|357556553|gb|EHJ38148.1| GTP-binding protein HflX [Clostridium difficile 70-100-2010]
Length = 427
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 176/308 (57%), Gaps = 44/308 (14%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFV--NAILSGIQQRNLERAWGKPVLDRVGLI 183
A + G G VE I+ + + LDA V N LSG Q RN+E G+ V+DR LI
Sbjct: 58 AAYYIGKGKVEEIRAYSDS------LDATLVIFNDELSGAQIRNIENVVGRKVIDRTTLI 111
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A +KE KLQ ELA L Y+ RL +G GE +S G G G R
Sbjct: 112 LDIFAQRALSKEGKLQVELAQLKYRLPRL-----------YGMGGE---MSRTGAGIGTR 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G GE +L++ +R IL + + + +++EV++ R QR R + + VA+V
Sbjct: 158 G----PGEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSN------IPIVALV 207
Query: 304 GYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGF 354
GYTNAGKSTL++ L + ++F LFATLD L+ +LP+ K L+ DTVGF
Sbjct: 208 GYTNAGKSTLLNELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGF 267
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+S LP LV+AF ATLEEV ADL++HV+D T + E ++T VL+++GV+++K
Sbjct: 268 VSKLPHDLVEAFKATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDKK---H 324
Query: 415 IEVWNKID 422
I V+NK+D
Sbjct: 325 ILVYNKVD 332
>gi|403354527|gb|EJY76820.1| Small GTP-binding protein domain containing protein [Oxytricha
trifallax]
Length = 730
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 170/281 (60%), Gaps = 27/281 (9%)
Query: 160 LSGIQQRNLERAWGKP--VLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRG 217
+S ++Q N ++ + V+DR G+I++IF A T+ A+LQ ELA L Y K+ LVR
Sbjct: 316 MSELEQNNQDKNQNRNIRVIDRFGIILQIFAQRAKTRTAQLQIELAWLSYAKTMLVRGGA 375
Query: 218 PDGRLTFGETG-------------EAEVVSARGRGSGGRGFISGAGETELQLQRRRILER 264
P TFG+ G E E+ SA+GR SG G + G GET+L+++RRR+ +R
Sbjct: 376 P----TFGQLGNIFSGNMMRRDIAEMEIKSAKGRKSGASGTMGGEGETQLEIERRRLGDR 431
Query: 265 RSHLLSQIEEV-RRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
+ +L ++ ++ ++T+ + R H L + ++GYTNAGK+ L++ ++ S L
Sbjct: 432 EAKILKELGDLDKKTQNEKLKKERSHNT-----LPLIGLIGYTNAGKTALMNLVTGSKLE 486
Query: 324 SDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 382
S LF TL+ K +G+ L+ DT+GFI++LP L+++F +TLEE+ AD+LVHV
Sbjct: 487 SQDLLFQTLNTTNKRFRFENGQNALMLDTIGFITNLPHGLIESFKSTLEEIHFADILVHV 546
Query: 383 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN-MIEVWNKID 422
D + P R TVL+VL+++GV EE L+ +EVWNKID
Sbjct: 547 RDISHPYSNYQRDTVLRVLKEIGVDEETLRTKYVEVWNKID 587
>gi|423082085|ref|ZP_17070680.1| GTP-binding protein HflX [Clostridium difficile 002-P50-2011]
gi|423085689|ref|ZP_17074131.1| GTP-binding protein HflX [Clostridium difficile 050-P50-2011]
gi|357549335|gb|EHJ31182.1| GTP-binding protein HflX [Clostridium difficile 002-P50-2011]
gi|357549606|gb|EHJ31452.1| GTP-binding protein HflX [Clostridium difficile 050-P50-2011]
Length = 427
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 176/308 (57%), Gaps = 44/308 (14%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFV--NAILSGIQQRNLERAWGKPVLDRVGLI 183
A + G G VE I+ + + LDA V N LSG Q RN+E G+ V+DR LI
Sbjct: 58 AAYYIGKGKVEEIRAYSDS------LDATLVIFNDELSGAQIRNIENVVGRKVIDRTTLI 111
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A +KE KLQ ELA L Y+ RL +G GE +S G G G R
Sbjct: 112 LDIFAQRALSKEGKLQVELAQLKYRLPRL-----------YGMGGE---MSRTGAGIGTR 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G GE +L++ +R IL + + + +++EV++ R QR R + + VA+V
Sbjct: 158 G----PGEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSN------IPIVALV 207
Query: 304 GYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGF 354
GYTNAGKSTL++ L + ++F LFATLD L+ +LP+ K L+ DTVGF
Sbjct: 208 GYTNAGKSTLLNELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGF 267
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+S LP LV+AF ATLEEV ADL++HV+D T + E ++T VL+++GV+++K
Sbjct: 268 VSKLPHDLVEAFKATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDKK---H 324
Query: 415 IEVWNKID 422
I V+NK+D
Sbjct: 325 ILVYNKVD 332
>gi|86134603|ref|ZP_01053185.1| GTP-binding protein HflX [Polaribacter sp. MED152]
gi|85821466|gb|EAQ42613.1| GTP-binding protein HflX [Polaribacter sp. MED152]
Length = 403
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 192/352 (54%), Gaps = 38/352 (10%)
Query: 81 LNEALCLANSLEEQRDGYFDTDFFDK-----ELPPHVVVQNPSLKSGKARADTFFGPGTV 135
++E L + +Q+D T++ D+ + VVV+ K + TF G G +
Sbjct: 8 ISEKAVLIGVITQQQDETKSTEYLDELEFLTQTAGGVVVKRFVQKMERPNPKTFLGAGKL 67
Query: 136 ETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKE 195
E +K +I +S AIF + LS Q RN+E+ +LDR LI++IF A T
Sbjct: 68 EDVKAYI---QSNMIGTAIFDDE-LSPAQLRNIEKILDCKILDRTNLILDIFAQRAQTSS 123
Query: 196 AKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQ 255
AK Q ELA Y RL R+ + + GG G + G GETE++
Sbjct: 124 AKTQVELAQSEYLLPRLTRLW-----------------THLDKQKGGIG-MRGPGETEIE 165
Query: 256 LQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVS 315
RR I ++ + L +++ + + AVQR R + + VA+VGYTN GKSTL++
Sbjct: 166 TDRRIIRDKITLLKKRLKTIDKQMAVQRKNRGK--------MVRVALVGYTNVGKSTLMN 217
Query: 316 ALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVE 375
+S SD+F++ +LFATLD ++ VV+ + L++DTVGFI LP QLV++F +TL+EV E
Sbjct: 218 VVSKSDVFAENKLFATLDTTVRKVVIKNIPFLMTDTVGFIRKLPTQLVESFKSTLDEVRE 277
Query: 376 ADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
ADLL+HV+D + PN E+H +V +L + ++ K + V+NKID + E
Sbjct: 278 ADLLLHVVDISHPNFEDHIASVNSILTDIKCAD---KPTLMVFNKIDAYQHE 326
>gi|225872683|ref|YP_002754140.1| GTP-binding protein HflX [Acidobacterium capsulatum ATCC 51196]
gi|347602417|sp|C1F407.1|HFLX_ACIC5 RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|225792080|gb|ACO32170.1| putative GTP-binding protein HflX [Acidobacterium capsulatum ATCC
51196]
Length = 432
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 176/312 (56%), Gaps = 38/312 (12%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
+ G+A A T G G VE ++ AES D I L+ Q RNLE A V+DR
Sbjct: 60 RRGRADAATLIGSGKVEEVRAV---AESS-HADVIVFGQNLTPTQLRNLENALPGRVIDR 115
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI++IF HA T+E LQ ELA L Y RL + RGR
Sbjct: 116 TQLILDIFARHARTREGMLQVELAQLEYMLPRL---------------------TGRGRE 154
Query: 240 SG---GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRG 296
G G GET+L+ RRRI R S L ++E VRR R+ QR +
Sbjct: 155 MSRLGGGIGTRGPGETQLETDRRRIQRRISTLKGELESVRRIRSQQRQR------REAVP 208
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFI 355
+ TVA+VGYTNAGKSTL +AL+ + + + +R+FATLDP+L+++VLPS KVLLSDTVGFI
Sbjct: 209 VPTVALVGYTNAGKSTLFNALTGAGVLASSRMFATLDPKLRAIVLPSRRKVLLSDTVGFI 268
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI 415
DLP L+ +F ATLEEV +A++L+HV DC++ EEHR V VL ++G + K I
Sbjct: 269 RDLPPTLISSFRATLEEVQKAEVLLHVQDCSSATREEHRAEVKHVLAELGAGD---KPQI 325
Query: 416 EVWNKIDYHDEE 427
EV NK+D E
Sbjct: 326 EVLNKVDLLSPE 337
>gi|376317235|emb|CCG00604.1| GTP-binding proten HflX [uncultured Flavobacteriia bacterium]
Length = 403
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 176/308 (57%), Gaps = 33/308 (10%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K G + TF G G +E ++ +I K E+ + + LS QQRN+E+ +LDR
Sbjct: 52 KMGSPNSKTFLGSGKIEEVREYI----EKHEVGLVVFDDELSPAQQRNIEKILECKILDR 107
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI++IF A T A+ Q ELA Y RL G T E R
Sbjct: 108 TNLILDIFAQRAQTSYARTQVELAQYQYLLPRLT------GMWTHLE-----------RQ 150
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG G + G GETE++ RR + +R S L ++++V + VQR R GS L
Sbjct: 151 KGGIG-MRGPGETEIETDRRIVRDRISLLKKKLQKVDKQMLVQRGNR----GS----LIR 201
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLP 359
VA+VGYTN GKSTL++ +S SD+F++ +LFATLD ++ VV+ + L+SDTVGFI LP
Sbjct: 202 VALVGYTNVGKSTLMNVISKSDVFAENKLFATLDTTVRKVVIKNLPFLVSDTVGFIRKLP 261
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
QLV++F +TL+EV EADLL+HV+D + + E+H +V ++L ++ S+ K + V+N
Sbjct: 262 TQLVESFKSTLDEVREADLLLHVVDISHASFEDHIASVEKILGEINASD---KPCVMVFN 318
Query: 420 KIDYHDEE 427
KID + E
Sbjct: 319 KIDAYKYE 326
>gi|260593313|ref|ZP_05858771.1| GTP-binding protein HflX [Prevotella veroralis F0319]
gi|260534725|gb|EEX17342.1| GTP-binding protein HflX [Prevotella veroralis F0319]
Length = 416
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 182/329 (55%), Gaps = 22/329 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + A T+ G G +E IK +I E E + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVNGPSAVTYVGKGKLEEIKEYIKQKEDDDEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E+ G +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIEQELGVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQRLAEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R L VA+VGYTN GKST ++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKTTQRKNRGR--------LIRVALVGYTNVGKSTTMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVVENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIQV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
V Q L ++G +++ +MI ++NKID YH
Sbjct: 315 VNQTLSELGCADK--PSMI-IFNKIDNYH 340
>gi|224538829|ref|ZP_03679368.1| hypothetical protein BACCELL_03725 [Bacteroides cellulosilyticus
DSM 14838]
gi|423227369|ref|ZP_17213832.1| GTP-binding protein HflX [Bacteroides cellulosilyticus CL02T12C19]
gi|224519556|gb|EEF88661.1| hypothetical protein BACCELL_03725 [Bacteroides cellulosilyticus
DSM 14838]
gi|392624082|gb|EIY18177.1| GTP-binding protein HflX [Bacteroides cellulosilyticus CL02T12C19]
Length = 419
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 184/334 (55%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K +A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELEFLAETAGAEVVKRFTQKLDQAHSVTYVGKGKLEEIKEYIRNEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + A+VGYTN GKSTL++ L+ S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------MIRAALVGYTNVGKSTLMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+H++D + P+
Sbjct: 249 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G S K +I V+NKID +
Sbjct: 309 EEQIEVVNKTLADIGASG---KPIILVFNKIDAY 339
>gi|297621460|ref|YP_003709597.1| GTP-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376761|gb|ADI38591.1| GTP-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293719|emb|CCB91706.1| GTP-binding protein hflX [Waddlia chondrophila 2032/99]
Length = 434
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 171/303 (56%), Gaps = 32/303 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGEL--DAIFVNAILSGIQQRNLERAWGKPVLDRV 180
K A T G VE I E+ EL D I + ++ QQRNLE+ + PV+DR
Sbjct: 63 KFNASTLISSGKVEEI------GETAKELGVDVIVFDDEVTPGQQRNLEKIYSIPVIDRS 116
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
+II +F AH+KEAKLQ ELA L Y RL R+ +S + +
Sbjct: 117 EVIIGVFAQRAHSKEAKLQVELARLKYLAPRLKRMWTH--------------LSRQQATA 162
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG ++ G GE ++++ RR + + HL +I V+ R QR R R + T
Sbjct: 163 GGGAYLKGKGEKQIEIDRRLLKTKIFHLQKEINAVQAHRDTQRIQRERSE------IPTF 216
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
A+VGYTNAGKSTL++AL+++ +F++ +LFATLD + LP+ + +LL+DTVGFI LP
Sbjct: 217 AIVGYTNAGKSTLLNALTEAGIFTEDKLFATLDTTTRKFTLPNNQEILLTDTVGFIRKLP 276
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV AF +TLEE V+AD+L+H++D + P E ++VL ++G + K +I V N
Sbjct: 277 HLLVAAFRSTLEEAVQADILIHLIDSSHPMALEQAEATVEVLHELGAKD---KPVITVLN 333
Query: 420 KID 422
KID
Sbjct: 334 KID 336
>gi|407001351|gb|EKE18367.1| hypothetical protein ACD_10C00015G0001 [uncultured bacterium]
Length = 384
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 186/340 (54%), Gaps = 38/340 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G V+ I + ES D + N LS Q+RNLER V+DR LI++IF
Sbjct: 56 TYAGKGKVQEIAAMLAATES----DLVIFNHQLSPAQERNLERELKCRVIDRTSLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G T R GG G +
Sbjct: 112 ALRAASAEGKLQVELAQLEHLSTRLVR----------GWTHLE-------RQQGGIG-MR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + R L +++++ R R VQR AR R G L V++VGYTN
Sbjct: 154 GPGETQLETDRRLLGVRVKLLKQRLDKLSRQRDVQRKARMR-----GEVL-NVSIVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL +AL+ + +++ +LFATLD + + + +G +++SDTVGFI DLP LVDAF
Sbjct: 208 AGKSTLFNALTHAGVYTADQLFATLDTTSRKLWIEGAGNIVISDTVGFIRDLPHSLVDAF 267
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
HATLE +ADLL+HV+D + +E V +VL +G S +K +I VWNKID +
Sbjct: 268 HATLEAATDADLLLHVVDSASHARDEQIVEVNKVLHDIGASH--VKQLI-VWNKIDLTEA 324
Query: 427 EMGDVEYIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYG 464
G +D D+ N +RA + E +D E + Y
Sbjct: 325 APG----VDQDEYGNIARARVSARSGEGLDTLREALAEYA 360
>gi|404449460|ref|ZP_11014450.1| GTP-binding protein HflX [Indibacter alkaliphilus LW1]
gi|403765148|gb|EJZ26033.1| GTP-binding protein HflX [Indibacter alkaliphilus LW1]
Length = 421
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 197/382 (51%), Gaps = 42/382 (10%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
AL ++Q Y D F E V + + K TF G G +E IK +I
Sbjct: 25 ALIKQGQSDQQAAEYLDELAFLTETLGASTVYRFTQRLEKPDVKTFVGTGKLEEIKSYIE 84
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
E +D + + LS Q RNLE V DR LI++IF A T +AK Q ELA
Sbjct: 85 HFE----VDMVIFDDDLSPSQMRNLENELKIKVYDRSLLILDIFLNRAQTAQAKTQVELA 140
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL R+ R RG G+ RG GAGE E++ +R I +
Sbjct: 141 RFQYLLPRLTRMWTHLER-------------QRG-GTSTRG---GAGEKEIETDKRDIRQ 183
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
+ + L ++++++ + QR R+ G+ VA+VGYTN GKSTL++ ++ S++
Sbjct: 184 KITLLKNKLKDIEKQGVTQRKGRK--------GIVRVALVGYTNVGKSTLMNLITKSEIL 235
Query: 324 SDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVL 383
++ +LFAT+D ++ VVL + LLSDTVGFI LP L+++F +TL+E+ EADLLVHV+
Sbjct: 236 AENKLFATVDSTVRKVVLDNIPFLLSDTVGFIRKLPTHLIESFKSTLDEIREADLLVHVI 295
Query: 384 DCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE--------MGDVEYID 435
D + P E+H T V L ++G + K M+ V+NKID E+ M ++E +
Sbjct: 296 DISHPGFEDHFTVVNNTLNEIGARD---KPMLLVFNKIDLIQEKPSEEELQHMTEIEVEE 352
Query: 436 GD--DISNFSRAEDKDTTSEPV 455
+ D+ S A +K T PV
Sbjct: 353 NNYLDLEKLSEAYEKKTGITPV 374
>gi|383810953|ref|ZP_09966433.1| GTP-binding protein HflX [Prevotella sp. oral taxon 306 str. F0472]
gi|383356358|gb|EID33862.1| GTP-binding protein HflX [Prevotella sp. oral taxon 306 str. F0472]
Length = 416
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 182/329 (55%), Gaps = 22/329 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + A T+ G G +E IK +I E E + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVNGPSAVTYVGKGKLEEIKEYIKQKEDDDEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E+ G +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIEQELGVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQRLAEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R L VA+VGYTN GKST ++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKTTQRKNRGR--------LIRVALVGYTNVGKSTTMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVVENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIQV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
V Q L ++G +++ +MI ++NKID YH
Sbjct: 315 VNQTLTELGCADK--PSMI-IFNKIDNYH 340
>gi|88801541|ref|ZP_01117069.1| GTP-binding protein HflX [Polaribacter irgensii 23-P]
gi|88782199|gb|EAR13376.1| GTP-binding protein HflX [Polaribacter irgensii 23-P]
Length = 402
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/331 (37%), Positives = 180/331 (54%), Gaps = 33/331 (9%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
E Q D Y D F V V+ K K TF G G ++ ++ +I ES G
Sbjct: 24 ETQSDEYLDELEFLTSTAGGVAVKRFVQKMEKPNPKTFLGVGKLDEVRGYI---ESNGIG 80
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
AIF + LS Q RN+E+ +LDR LI++IF A + A+ Q ELA Y R
Sbjct: 81 TAIFDDE-LSPAQIRNIEKVLDCKILDRTNLILDIFAQRAQSSSARTQVELAQCQYLLPR 139
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L R+ + + GG G + G GETE++ RR I ++ L +
Sbjct: 140 LTRLW-----------------THLDKQKGGIG-MRGPGETEIETDRRIIRDKIDVLKKK 181
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
+ + + AVQR R + + +A+VGYTN GKSTL++ +S SD+F++ +LFAT
Sbjct: 182 LLTIDKQMAVQRKNRGK--------MVRIALVGYTNVGKSTLMNVISKSDVFAENKLFAT 233
Query: 332 LDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLE 391
LD ++ VV+ + L++DTVGFI LP QLV++F +TL+EV EADLL+HV+D + PN E
Sbjct: 234 LDTTVRKVVIKNIPFLMTDTVGFIRKLPTQLVESFKSTLDEVREADLLLHVIDISHPNFE 293
Query: 392 EHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+H +V VLQ + ++ K + V+NKID
Sbjct: 294 DHIASVNSVLQDIKCAD---KPTLMVFNKID 321
>gi|285017959|ref|YP_003375670.1| GTP-binding protein hflx [Xanthomonas albilineans GPE PC73]
gi|283473177|emb|CBA15683.1| probable gtp-binding protein hflx [Xanthomonas albilineans GPE
PC73]
Length = 441
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 169/300 (56%), Gaps = 30/300 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K A++ G D I VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AADASGA-DLILVNHALSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RLVR G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R AR R L +AV
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQKRLEKVEVQHTQMRRARVRSE------LPRIAV 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL +AL+ ++ ++ +LFATLDP ++ + LP G +L+DTVGF+ DLP +L
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYAADQLFATLDPTVRRIALPGGNAMLADTVGFVRDLPHEL 263
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E EAD L+HV+D P EE V +VL VG E L ++ V+NKID
Sbjct: 264 VAAFRSTLSEAREADFLLHVVDAADPLREERIAQVDEVLHAVGAGE--LPQLL-VFNKID 320
>gi|268318261|ref|YP_003291980.1| GTP-binding proten HflX [Rhodothermus marinus DSM 4252]
gi|262335795|gb|ACY49592.1| GTP-binding proten HflX [Rhodothermus marinus DSM 4252]
Length = 442
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 173/301 (57%), Gaps = 34/301 (11%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
+ A T+ G G VE +K + +S D + + LS Q RNLERA G +LDR GL
Sbjct: 55 RVHAATYVGRGKVEELKRLVAARKS----DLVIFDDDLSPAQMRNLERALGCKLLDRTGL 110
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A T AK Q ELA L Y ++RL R + R GG
Sbjct: 111 ILDIFARRARTAVAKTQVELAQLEYMRTRLTRQ-----------------WTHLSRQKGG 153
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G G GET+++ RR I R + L ++E + R R QR R+R+ V++
Sbjct: 154 IG-TKGPGETQIETDRRLIARRIAVLRERLERIDRQRTTQRKKRQRY--------TRVSL 204
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQ 361
VGYTNAGKSTL++ L+ +++ ++ RLFATLD + V L GK VLLSDTVGFI LP +
Sbjct: 205 VGYTNAGKSTLMNVLAGTNVLAEDRLFATLDATTRLVHLEPGKPVLLSDTVGFIRKLPHR 264
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
L+++F +TL+EV E+D+L+H++D T P E+H V + L ++G ++ K M+ V+NKI
Sbjct: 265 LIESFKSTLDEVRESDVLLHLVDATHPRFEDHIQVVHETLAELGAAD---KPMLLVFNKI 321
Query: 422 D 422
D
Sbjct: 322 D 322
>gi|210623584|ref|ZP_03293910.1| hypothetical protein CLOHIR_01860 [Clostridium hiranonis DSM 13275]
gi|210153454|gb|EEA84460.1| hypothetical protein CLOHIR_01860 [Clostridium hiranonis DSM 13275]
Length = 436
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 189/357 (52%), Gaps = 52/357 (14%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A + G G VE IK + G LDA I N LSG Q RN+E G +DR LI
Sbjct: 67 AAYYIGKGKVEEIKGYCEG------LDATLIIFNDELSGAQTRNIEDLTGIKTIDRTTLI 120
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A +KE KLQ ELA L Y RL R+ G G + S G G G R
Sbjct: 121 LDIFAQRAKSKEGKLQVELAQLKY---RLPRLYGMGGAM-----------SRTGAGIGTR 166
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G GE +L++ +R IL R + + ++++ V++ R QR R++ + VA+V
Sbjct: 167 G----PGEQKLEIDKRHILNRAADIRAELKLVKKNRETQRNQRKKSN------IPIVALV 216
Query: 304 GYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGF 354
GYTNAGKSTL++ L S+ ++F LFATLD L+ VLP+ + L+ DTVGF
Sbjct: 217 GYTNAGKSTLLNELIKTHKEYESEKEVFVKDMLFATLDVTLRKAVLPNKRDFLVVDTVGF 276
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+S LP LVDAF +TLEEV ADL++HV+D T + E + T +VL+++G ++K
Sbjct: 277 VSKLPHDLVDAFKSTLEEVNYADLILHVIDATNDSYEIQKKTTEKVLKELGADDKK---T 333
Query: 415 IEVWNKI-----DYHDEEMGDVEYID---GDDISNFSRAEDKDTTSEPVDVECIDNY 463
I V+NK+ D + + DV YI G ++ +K DVE + Y
Sbjct: 334 ILVYNKVDKLELDIYPKNQDDVVYISAKQGINMDKLLNMIEKAVMENTYDVELLIPY 390
>gi|431806506|ref|YP_007233407.1| GTP-binding protein HflX [Liberibacter crescens BT-1]
gi|430800481|gb|AGA65152.1| GTP-binding protein HflX [Liberibacter crescens BT-1]
Length = 447
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 207/387 (53%), Gaps = 59/387 (15%)
Query: 50 VVTLFNRDP--DDPPRLFLVQPRLKPP----------TFLQAKLNEALCLANSLEEQRDG 97
VV L +D D R+ +V+ LK +F +++L+EA+ LA +++ Q
Sbjct: 2 VVFLIKKDKICKDTSRVIVVEVVLKSISSSADDISNISFSESRLHEAVGLAQAIDLQ--- 58
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVN 157
VV++ + + T G ++ I I+ + + I ++
Sbjct: 59 ---------------VVRSFVVAVSRPSPATLIRKGKIKEINTIIHDLD----VGLIIID 99
Query: 158 AILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRG 217
L+ +QQRNLE+ W V+DR+GLI+EIF A TKE LQ ELA L Y+K RLVR
Sbjct: 100 QSLTPVQQRNLEKIWNIKVIDRIGLILEIFGRRALTKEGALQVELAHLNYQKGRLVR--- 156
Query: 218 PDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRR 277
T E R GG GF+ G GET+++ RR + ++ +L Q+E+V R
Sbjct: 157 ---SWTHLE-----------RQRGGTGFLGGPGETQIEADRRMLQQKICYLEQQLEKVVR 202
Query: 278 TRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLK 337
TR + RA R++ +A+VGYTNAGKSTL + ++ S +F + LF+TLDP L+
Sbjct: 203 TRQLHRAKRKK------VPYPIIALVGYTNAGKSTLFNRITGSSVFVENMLFSTLDPTLR 256
Query: 338 SVVLPSGKV-LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
++LP G V L+DTVGFISDLP LV AF ATLEEV +AD+++HV D + N
Sbjct: 257 RIILPHGPVAFLADTVGFISDLPTHLVAAFRATLEEVRQADVILHVRDISNRNNAAQARD 316
Query: 397 VLQVLQQVGV-SEEKLKNMIEVWNKID 422
V +L + + E ++EVWNK+D
Sbjct: 317 VYTILSDLDIDVMEDCGRILEVWNKVD 343
>gi|393778656|ref|ZP_10366920.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|392611632|gb|EIW94364.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 412 str.
F0487]
Length = 401
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 182/324 (56%), Gaps = 34/324 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLTAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVIENLPFLLSDTVGFIRKLPTQLIESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHDE 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTNE 326
Query: 427 EMGDVEYIDGDDISNFSRAEDKDT 450
E+ + + +F+ E K T
Sbjct: 327 EIAEDDLATQRTTKHFTLEEWKQT 350
>gi|156403051|ref|XP_001639903.1| predicted protein [Nematostella vectensis]
gi|156227034|gb|EDO47840.1| predicted protein [Nematostella vectensis]
Length = 517
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 181/305 (59%), Gaps = 27/305 (8%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGE--LDAIFVN-AILSGIQQRNLERAWGKPVLDR 179
K +FFG G +E ++ I+ A+ E LDA++++ L+ Q + LE W V DR
Sbjct: 132 KVDTKSFFGKGKIEELQERISQAKQIEENTLDAVYLDVGQLTPRQHKELEVFWDVKVFDR 191
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
G++++IF A T EAK+Q ELA + Y +SRLV D + F +
Sbjct: 192 FGIVLQIFKERAQTAEAKIQVELAEIPYIRSRLV----GDDSVEFDQQ------------ 235
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG FISG+GET+L+ +RR + ER L ++E +R+ R R R++ R +
Sbjct: 236 RGGTHFISGSGETQLERERRVLTERELKLKKKLEALRKHREHVRHERQK------RHIPV 289
Query: 300 VAVVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISD 357
V+VVGYTNAGK+TL+ +L+ D+ + D +LFATLD LPSG +VL DTVGF+SD
Sbjct: 290 VSVVGYTNAGKTTLIKSLTGDNKMQPDNKLFATLDVTAHPGKLPSGMQVLFVDTVGFVSD 349
Query: 358 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 417
LP +LV++F ATLE++V++DL+VHV D P E VL VLQQ+ + +K +I V
Sbjct: 350 LPPELVESFSATLEDMVDSDLVVHVRDVCHPEQEAQNEDVLSVLQQLKLRPALMKTIINV 409
Query: 418 WNKID 422
+NKID
Sbjct: 410 YNKID 414
>gi|387815056|ref|YP_005430543.1| GTP-binding protein hflX [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381340073|emb|CCG96120.1| putative GTP-binding protein hflX [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 432
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 173/298 (58%), Gaps = 32/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I+ + +E+ D + N LS Q+RN+ER VLDR G+I++IF
Sbjct: 57 FVGEGKLEEIRDAVAASEA----DVVLFNHALSPSQERNIERELKCRVLDRTGVILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER + ++E+VR+ R R AR+R + T+++VGYTNA
Sbjct: 155 PGETQLETDRRLLRERIKSIHRRLEKVRKQRDQGRRARKRAD------IPTLSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + ++ S +++ +LFATLDP L+ + LP G V+++DTVGFI LP +LV+AF
Sbjct: 209 GKSTLFNRITTSSVYAADQLFATLDPTLRRLELPDIGPVVMADTVGFIRHLPHKLVEAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
ATLEE +A LL+HV+DC +E+ V VL ++G E M++V+NKID D
Sbjct: 269 ATLEETTQATLLLHVIDCHDSRRDENIEQVENVLAEIGADE---IPMLQVFNKIDLLD 323
>gi|307243739|ref|ZP_07525879.1| GTP-binding protein HflX [Peptostreptococcus stomatis DSM 17678]
gi|306492948|gb|EFM64961.1| GTP-binding protein HflX [Peptostreptococcus stomatis DSM 17678]
Length = 437
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 173/309 (55%), Gaps = 40/309 (12%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+ G G +E IK + + + + N LSG Q RN+E GK ++DR LI++
Sbjct: 68 AATYMGSGKIEEIKAYADSLNAS----MVVFNDELSGAQIRNIEDIVGKKIIDRTTLILD 123
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A ++E KLQ ELA L Y RL R+ G G++ S G G G RG
Sbjct: 124 IFAQRALSREGKLQVELAQLKY---RLPRLYGMGGQM-----------SRTGAGIGTRG- 168
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +L+ +R IL R +++ +++EV + R +QRA R ++ + VA+VGY
Sbjct: 169 ---PGEQKLEKDKRHILNRAANIRKELKEVVKIRDIQRAQRSKNR------VPIVALVGY 219
Query: 306 TNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
TNAGKSTL++ + D ++F LFATLD L+ +LP+ K L+ DTVGF+S
Sbjct: 220 TNAGKSTLLNEIIKTHPDYEKDKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGFVS 279
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP LVDAF ATLEEV ADL++H++D T + + ++T VL+ + + K I
Sbjct: 280 KLPHDLVDAFKATLEEVTYADLILHIIDATNTSSDIQKSTTESVLKDLKADD---KYTIT 336
Query: 417 VWNKIDYHD 425
V+NKID D
Sbjct: 337 VYNKIDKLD 345
>gi|255534048|ref|YP_003094420.1| GTP-binding proten HflX [Pedobacter heparinus DSM 2366]
gi|255347032|gb|ACU06358.1| GTP-binding proten HflX [Pedobacter heparinus DSM 2366]
Length = 396
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 170/297 (57%), Gaps = 33/297 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E I+ ++ E +D + + LS Q RN+E+ +LDR LI++IF
Sbjct: 64 TFVGTGKLEEIQAYVKSEE----IDMVVFDDELSPSQLRNIEKELQVKILDRSNLILDIF 119
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T +AK Q ELA L Y RL R+ + R GG G +
Sbjct: 120 AGRAQTAQAKTQVELAQLQYLLPRLTRLW-----------------THLERQKGGIG-MR 161
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR ILE+ S L ++++++ R QR R + L VA+VGYTN
Sbjct: 162 GPGETQIESDRRMILEKISLLKTRLKQIDRQNETQRKNRGQ--------LIRVALVGYTN 213
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKST+++ LS S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP LV+ F
Sbjct: 214 VGKSTIMNMLSKSEVFAENKLFATLDTTVRKVVIENLPFLLSDTVGFIRKLPHHLVECFK 273
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+TL+EV EAD+L+HV+D + PN E+ V + L+ +G + K+ I V+NKID +
Sbjct: 274 STLDEVREADILIHVVDVSHPNFEDQINVVNETLKDLGARD---KDTIMVFNKIDAY 327
>gi|20807587|ref|NP_622758.1| GTPase [Thermoanaerobacter tengcongensis MB4]
gi|81481813|sp|Q8RAS5.1|HFLX_THETN RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|20516126|gb|AAM24362.1| GTPases [Thermoanaerobacter tengcongensis MB4]
Length = 428
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 173/295 (58%), Gaps = 32/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K + ++ D + VN L+G Q +NLE A G ++DR LI++IF
Sbjct: 73 YIGKGKLEELKMFVENQQA----DLVIVNDELTGTQIKNLEDALGVKIVDRTNLILDIFA 128
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE LQ ELA L Y+ RLV + G RL G
Sbjct: 129 KRARSKEGMLQVELAQLKYRLPRLVGLGGQLSRLGGGIGTRG------------------ 170
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I R + ++EE+ + R +QR R+++ + VA+VGYTNA
Sbjct: 171 PGETKLEVDRRHIRNRIKAIEEKLEELEKHRNLQRQRRKKNQ------IPVVAIVGYTNA 224
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++AL+ +D + + +LFATLDP + +VLPSG+ V+L+DTVGFI LP LV+AF
Sbjct: 225 GKSTLLNALTGADAYVEDKLFATLDPTARKLVLPSGREVILTDTVGFIRKLPHDLVEAFK 284
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TLEEV ADLL+HV+D T+P+++E V +VL +G E I V+NKID
Sbjct: 285 STLEEVKYADLLLHVIDVTSPDMDEKIKVVEKVLSDLGAIETP---RINVYNKID 336
>gi|323344483|ref|ZP_08084708.1| GTP-binding protein HflX [Prevotella oralis ATCC 33269]
gi|323094610|gb|EFZ37186.1| GTP-binding protein HflX [Prevotella oralis ATCC 33269]
Length = 414
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 186/328 (56%), Gaps = 21/328 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGELDAIFV 156
Y D F + V V+ + K G + T+ G G +E IK +I + E++ + +
Sbjct: 32 YLDELEFLADTAGAVTVRRFTQKVGGPNSVTYVGTGKLEEIKQYIKDEEEAERPVGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q R +E+ G +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQIRVIEKELGVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++EE+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKRRLEEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKTTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE T
Sbjct: 255 RKVVVDNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQITV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
V L+++G +E+ +MI V+NKID +
Sbjct: 315 VENTLKELGCAEK--PSMI-VFNKIDNY 339
>gi|330501624|ref|YP_004378493.1| HSR1-like GTP-binding protein [Pseudomonas mendocina NK-01]
gi|328915911|gb|AEB56742.1| GTP-binding protein, HSR1-related protein [Pseudomonas mendocina
NK-01]
Length = 433
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 178/309 (57%), Gaps = 32/309 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ S + A G G VE ++ + E+ D + N L+ Q+RNLERA+ VL
Sbjct: 47 SVPSSRLTAKFLIGSGKVEELRDQVKAVEA----DLVIFNHTLTPSQERNLERAFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLDHMSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +D +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQKLEKVRSQREQARRGRKR---AD---I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
+V++VGYTNAGKSTL +AL+ S++++ +LFATLDP L+ + L G ++L+DTVGFI
Sbjct: 199 PSVSLVGYTNAGKSTLFNALTTSEVYAADQLFATLDPTLRRLELDDLGPIVLADTVGFIR 258
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV+AF ATLEE +DLL+HV+D P V +VL+++G S+ M+E
Sbjct: 259 HLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMAQIEQVQEVLKEIGASD---LPMLE 315
Query: 417 VWNKIDYHD 425
V+NK+D D
Sbjct: 316 VYNKLDLLD 324
>gi|302386875|ref|YP_003822697.1| GTP-binding proten HflX [Clostridium saccharolyticum WM1]
gi|347602420|sp|D9R4W7.1|HFLX_CLOSW RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|302197503|gb|ADL05074.1| GTP-binding proten HflX [Clostridium saccharolyticum WM1]
Length = 423
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 174/301 (57%), Gaps = 36/301 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G +E IK I ELDA I + LS Q RNLE A V+DR +I++
Sbjct: 60 TYLGKGKIEEIKDRI------WELDATGIVCDDELSPAQLRNLEGALDTKVMDRTMVILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A T+E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 114 IFASRAVTREGKIQVELAQLRYRSARLVGLRSSLSRLGGGIGTRG--------------- 158
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +L++ RR I +R L +++E+V+R R V R R D + A+VGY
Sbjct: 159 ---PGEKKLEMDRRLIHDRIGMLKAELEDVKRHREVVRQQR------DKNHVPAAAIVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVD 364
TNAGKSTL++ L+D+ + ++ +LFATLDP +++ LP G+ +LL+DTVGFI LP L++
Sbjct: 210 TNAGKSTLLNRLTDAGILAEDKLFATLDPTTRNLSLPGGQQILLTDTVGFIRKLPHHLIE 269
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF +TLEE +D+++HV+DC+ P ++ V + L+++G+ + K MI V+NKID
Sbjct: 270 AFKSTLEEAKYSDIILHVVDCSNPQMDMQMYVVYETLRELGICD---KIMITVFNKIDAA 326
Query: 425 D 425
D
Sbjct: 327 D 327
>gi|148653665|ref|YP_001280758.1| HSR1-like GTP-binding protein [Psychrobacter sp. PRwf-1]
gi|148572749|gb|ABQ94808.1| GTP-binding protein, HSR1-related protein [Psychrobacter sp.
PRwf-1]
Length = 481
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 178/305 (58%), Gaps = 33/305 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K A F G G + I + E+ D + N L+ Q+RNLE VLDR GL
Sbjct: 53 KPDAKYFIGSGKAQEIAEQVQALEA----DIVIFNHSLTPSQERNLETLLQCRVLDRTGL 108
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A T E KLQ ELA L + +RLVR G T R GG
Sbjct: 109 ILDIFAQRARTYEGKLQVELAQLNHLATRLVR----------GWT-------HLERQKGG 151
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G + G GET+L+ RR + R S L +++++V++TRA RA R++ SD + T+++
Sbjct: 152 IG-LRGPGETQLETDRRLLQIRVSQLKARLDKVKQTRAQGRAKRQK---SD---VLTISL 204
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQ 361
VGYTNAGKS+L + L D D+++ +LFATLDP L+ + G+V+L DTVGF+ LP +
Sbjct: 205 VGYTNAGKSSLFNRLVDEDIYAADQLFATLDPTLRRMDWQGVGRVVLVDTVGFVRHLPHE 264
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV++FHATLEE +EADLL+HV+D ++P++ E V +VL ++ + ++ V+NKI
Sbjct: 265 LVESFHATLEETLEADLLLHVIDSSSPDMHEQIKAVKEVLSEI----DNHVPVLNVYNKI 320
Query: 422 DYHDE 426
D E
Sbjct: 321 DITGE 325
>gi|365121233|ref|ZP_09338224.1| GTP-binding protein HflX [Tannerella sp. 6_1_58FAA_CT1]
gi|363645856|gb|EHL85109.1| GTP-binding protein HflX [Tannerella sp. 6_1_58FAA_CT1]
Length = 407
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 206/387 (53%), Gaps = 51/387 (13%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q +N+E+ +LDR LI++IF
Sbjct: 62 TFVGAGKLQEIKDYV----EENEIGLVIFDDDLSPKQLKNIEKELQVKILDRTSLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 AKRAQTANAKSQVELAQYQYLLPRLTRLW-----------------THLERQRGGIG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR IL++ S L ++++++ + + +QR R + + VA+VGYTN
Sbjct: 160 GPGETQIETDRRIILDKISRLKAELKQIDKQKEMQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ LS S++F++ +LFATLD ++ V++ + LL+DTVGFI LP LV++F
Sbjct: 212 VGKSTLMNLLSKSEVFAENKLFATLDTTVRKVIIDNLPFLLTDTVGFIRKLPTHLVESFK 271
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV +ADLLVHV+D + P+ EE V Q L +V S + K MI V+NKID
Sbjct: 272 STLDEVRDADLLVHVVDISHPSFEEQIEIVNQTLHEVCNSSD--KPMIIVFNKIDAFS-- 327
Query: 428 MGDVEYI--DGDDIS-----NFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLG 480
Y+ D DD+S N S E K+T ++ CI + NN + + L
Sbjct: 328 -----YVEKDPDDLSPKTKENISLDELKETWMARMNENCI--FISAKEKNNIEELKKLLY 380
Query: 481 ESMNKNHND---YSDGWLLSGDEQDNV 504
E + + H Y+D DE++N+
Sbjct: 381 ERVKEIHVTRFPYNDFLFQKYDEEENI 407
>gi|120555679|ref|YP_960030.1| HSR1-like GTP-binding protein [Marinobacter aquaeolei VT8]
gi|120325528|gb|ABM19843.1| GTP-binding protein, HSR1-related protein [Marinobacter aquaeolei
VT8]
Length = 432
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 173/298 (58%), Gaps = 32/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I+ + +E+ D + N LS Q+RN+ER VLDR G+I++IF
Sbjct: 57 FVGEGKLEEIRDAVAASEA----DVVLFNHALSPSQERNIERELKCRVLDRTGVILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER + ++E+VR+ R R AR+R + T+++VGYTNA
Sbjct: 155 PGETQLETDRRLLRERIKSIHRRLEKVRKQRDQGRRARKRAD------IPTLSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + ++ S +++ +LFATLDP L+ + LP G V+++DTVGFI LP +LV+AF
Sbjct: 209 GKSTLFNRITTSSVYAADQLFATLDPTLRRLELPDIGPVVMADTVGFIRHLPHKLVEAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
ATLEE +A LL+HV+DC +E+ V VL ++G E M++V+NKID D
Sbjct: 269 ATLEETTQATLLLHVIDCHDSRRDENIEQVESVLAEIGADE---IPMLQVFNKIDLLD 323
>gi|386262350|ref|YP_004943206.2| GTP-binding protein HflX [Flavobacterium columnare ATCC 49512]
gi|372863672|gb|AEW87413.2| GTP-binding protein HflX [Flavobacterium columnare ATCC 49512]
Length = 406
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 174/312 (55%), Gaps = 33/312 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + K K TF G G +E I +I + ++ + + LS QQ+N+ R
Sbjct: 45 VVKRFTQKMDKPNPKTFVGTGKLEQINLYI----KENDIKTVIFDDELSPAQQKNITREL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 DCKVLDRTNLILDIFAQRAETSYARTQVELAQCQYLLPRLT------GMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + +R + L +I+ + + A+QR+ R
Sbjct: 149 -----RQRGGIG-MRGPGETEIETDRRIVRDRIALLKEKIKTIDKQMAIQRSNRG----- 197
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTV 352
+ VA+VGYTN GKSTL++A+ S++F + +LFATLD ++ VV+ + LLSDTV
Sbjct: 198 ---AMVRVALVGYTNVGKSTLMNAVGKSEVFVENKLFATLDTTVRKVVIKNLPFLLSDTV 254
Query: 353 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 412
GFI LP QLV++F +TL+EV EADLL+H++D + P E+H +V Q+LQ + S+ K
Sbjct: 255 GFIRKLPTQLVESFKSTLDEVREADLLLHIVDISHPEFEDHIESVNQILQDIKSSD---K 311
Query: 413 NMIEVWNKIDYH 424
I V+NKID +
Sbjct: 312 PTIMVFNKIDSY 323
>gi|420149042|ref|ZP_14656224.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 335 str.
F0486]
gi|394754268|gb|EJF37701.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 335 str.
F0486]
Length = 401
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 175/304 (57%), Gaps = 34/304 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEIGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLTAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVIENLPFLLSDTVGFIRKLPTQLIESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHDE 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTNE 326
Query: 427 EMGD 430
E+ +
Sbjct: 327 EIAE 330
>gi|146298932|ref|YP_001193523.1| HSR1-like GTP-binding protein [Flavobacterium johnsoniae UW101]
gi|146153350|gb|ABQ04204.1| GTP-binding protein, HSR1-related [Flavobacterium johnsoniae UW101]
Length = 409
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 185/341 (54%), Gaps = 33/341 (9%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
+ N EE+ + Y D F V++ S K + TF G G ++ I +
Sbjct: 16 GIVTQNQSEEKLNEYLDELEFLTFTAGGEVIKRFSQKMERPNPKTFVGTGKIDEINLFV- 74
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
+ ++ + + L+ QQ+N+ R +LDR LI++IF A T A+ Q ELA
Sbjct: 75 ---KENKISTVIFDDELTPSQQKNISRIIDCKILDRTNLILDIFAQRAETSYARTQVELA 131
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
+Y RL G T E R GG G + G GETE++ RR + +
Sbjct: 132 QCIYLLPRL------SGLWTHLE-----------RQKGGIG-MRGPGETEIETDRRIVRD 173
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R S L +I+ + + ++QR+ R + VA+VGYTN GKSTL++A+ S++F
Sbjct: 174 RISLLKEKIKTIDKQMSIQRSNRG--------AMVRVALVGYTNVGKSTLMNAIGKSEVF 225
Query: 324 SDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVL 383
+ +LFATLD ++ VV+ + LLSDTVGFI LP QLVD+F +TL+EV EADLL+HV+
Sbjct: 226 VENKLFATLDTTVRKVVIKNLPFLLSDTVGFIRKLPTQLVDSFKSTLDEVREADLLLHVV 285
Query: 384 DCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
D + P+ E+H +V Q+LQ++ ++ K I V+NKID +
Sbjct: 286 DISHPDFEDHIESVNQILQEIKSND---KPTIMVFNKIDAY 323
>gi|340622730|ref|YP_004741182.1| GTP-binding protein hflX [Capnocytophaga canimorsus Cc5]
gi|339902996|gb|AEK24075.1| GTP-binding protein hflX [Capnocytophaga canimorsus Cc5]
Length = 408
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 199/381 (52%), Gaps = 36/381 (9%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EE+ Y D F V+Q + K TF G G +E ++ + E G
Sbjct: 24 EEKSKEYLDELEFLTYTAGGEVLQRFTQKLDVPNPKTFIGTGKMEEVQQFV---EENGVG 80
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
IF + LS QQ+N+ER +LDR GLI++IF A T ++ Q ELA Y R
Sbjct: 81 TVIFDDE-LSPAQQKNIERILKAKILDRTGLILDIFAQRAQTSYSRTQVELAQYQYLLPR 139
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L G T E R GG G + G GETE++ RR + +R + L +
Sbjct: 140 LT------GLWTHLE-----------RQRGGIG-MRGPGETEIETDRRIVRDRIALLKKK 181
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
+ + R AVQR R + VA++GYTN GKSTL++ +S S++F++ +LFAT
Sbjct: 182 LATIDRQMAVQRGNRG--------AMVRVALIGYTNVGKSTLMNVISKSEVFAENKLFAT 233
Query: 332 LDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLE 391
LD ++ VV+ + LLSDTVGFI LP QL+++F +TL+EV EADLL+H++D + PN E
Sbjct: 234 LDTTVRKVVIGNLPFLLSDTVGFIRKLPTQLIESFKSTLDEVREADLLLHIVDISHPNFE 293
Query: 392 EHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHDEEMGDVEYIDGDDISNFSRAEDKDT 450
EH +V Q+L ++ ++ K I V+NKID Y + + + + I +F+ + K T
Sbjct: 294 EHIHSVNQILSEIKSAD---KPTIMVFNKIDAYKHQTIAEDDLITEPTSKHFTLEQWKQT 350
Query: 451 TSEPV--DVECIDNYGGDDAD 469
V DV I D+ +
Sbjct: 351 WMNKVGNDVLFISALNKDNLE 371
>gi|114319735|ref|YP_741418.1| HSR1-like GTP-binding protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114226129|gb|ABI55928.1| GTP-binding protein HflX [Alkalilimnicola ehrlichii MLHE-1]
Length = 421
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 175/302 (57%), Gaps = 32/302 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE + I AE +D + ++ +S Q+RNLERA+ VLDR GLI++IF
Sbjct: 45 FLGRGKVEELAARIP-AEG---IDLVLIDHAISPAQERNLERAFRCRVLDRTGLILDIFA 100
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + SRLVR S R GG G + G
Sbjct: 101 QRARSHEGKLQVELAQLRHIASRLVRG-----------------WSHLERQKGGIG-LRG 142
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR + R L ++E+VRR RA R A + V++VGYTNA
Sbjct: 143 PGETQLEMDRRMLGTRIKQLERKLEKVRRQRAQGRQA------RRRQEFPVVSLVGYTNA 196
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL +AL+ S L++D RLFATLD L+ + LP G+ V+L+DTVGFISDLP LV AF
Sbjct: 197 GKSTLFNALTGSGLYADDRLFATLDTTLRRLELPDGQPVILADTVGFISDLPHGLVAAFR 256
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TLEEV E+DLL+HV+D P+ EH V QVL +G SE ++ V+NK D
Sbjct: 257 STLEEVGESDLLLHVVDAADPDRREHARQVQQVLADIGASE---VPVLTVYNKADLCQHP 313
Query: 428 MG 429
+G
Sbjct: 314 VG 315
>gi|383449394|ref|YP_005356115.1| GTP-binding protein HflX [Flavobacterium indicum GPTSA100-9]
gi|380501016|emb|CCG52058.1| GTP-binding protein HflX [Flavobacterium indicum GPTSA100-9]
Length = 407
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 184/339 (54%), Gaps = 34/339 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + K K TF G G +E I +I E K + + L+ QQ+N+ R
Sbjct: 45 VVKRFTQKMDKPNPKTFVGSGKLEEINYYIKDNEVK----TVIFDDELTPAQQKNITREL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 DCKVLDRTNLILDIFAQRAETSYARTQVELAQCQYLLPRLT------GMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + +R + L +I+ + + A+QR+ R
Sbjct: 149 -----RQRGGIG-MRGPGETEIETDRRIVRDRIALLKEKIKTIDKQMAIQRSNRG----- 197
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTV 352
+ VA+VGYTN GKSTL++A+ S++F + +LFATLD ++ V+ + LLSDTV
Sbjct: 198 ---AMVRVALVGYTNVGKSTLMNAVGKSEVFVENKLFATLDTTVRKTVIKNLPFLLSDTV 254
Query: 353 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 412
GFI LP QLV++F +TL+EV EADLL+HV+D + P+ E+H +V Q+LQ + ++ K
Sbjct: 255 GFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHPDFEDHIESVNQILQDIKSAD---K 311
Query: 413 NMIEVWNKID-YHDEEMGDVEYIDGDDISNFSRAEDKDT 450
I V+NKID Y +++ + + NFS + K T
Sbjct: 312 PTIMVFNKIDAYSYDKIDETDITIEKTTKNFSLEDWKKT 350
>gi|345304556|ref|YP_004826458.1| GTP-binding proten HflX [Rhodothermus marinus SG0.5JP17-172]
gi|345113789|gb|AEN74621.1| GTP-binding proten HflX [Rhodothermus marinus SG0.5JP17-172]
Length = 442
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 173/301 (57%), Gaps = 34/301 (11%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
+ A T+ G G VE +K + +S D + + LS Q RNLERA G +LDR GL
Sbjct: 55 RVHAATYVGRGKVEELKRLVVARKS----DLVIFDDDLSPAQMRNLERALGCKLLDRTGL 110
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A T AK Q ELA L Y ++RL R + R GG
Sbjct: 111 ILDIFARRARTAVAKTQVELAQLEYMRTRLTRQ-----------------WTHLSRQKGG 153
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G G GET+++ RR I R + L ++E + R R QR R+R+ V++
Sbjct: 154 IG-TKGPGETQIETDRRLIARRIAVLRERLERIDRQRTTQRKKRQRY--------TRVSL 204
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQ 361
VGYTNAGKSTL++ L+ +++ ++ RLFATLD + V L GK VLLSDTVGFI LP +
Sbjct: 205 VGYTNAGKSTLMNVLAGTNVLAEDRLFATLDATTRLVHLEPGKPVLLSDTVGFIRKLPHR 264
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
L+++F +TL+EV E+D+L+H++D T P E+H V + L ++G ++ K M+ V+NKI
Sbjct: 265 LIESFKSTLDEVRESDVLLHLVDATHPRFEDHIQVVHETLAELGAAD---KPMLLVFNKI 321
Query: 422 D 422
D
Sbjct: 322 D 322
>gi|424794849|ref|ZP_18220772.1| GTP-binding protein, probable [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422795739|gb|EKU24373.1| GTP-binding protein, probable [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 441
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/324 (39%), Positives = 179/324 (55%), Gaps = 32/324 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D I VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEASGA-DLILVNHALSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RL+R G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLIR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R AR R L +AV
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQKRLEKVEVQHTQMRRARVRSE------LPRIAV 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL +AL+ ++ ++ +LFATLDP ++ + LP G +L+DTVGF+ +LP +L
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYAADKLFATLDPTVRRIALPGGNAMLADTVGFVRNLPHEL 263
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E EAD L+HV+D P EE V +VL VG + L ++ V+NKID
Sbjct: 264 VAAFRSTLSEAREADFLLHVVDAADPLREERIAQVDEVLHAVGAGD--LPQLL-VFNKID 320
Query: 423 YHDEEMGDVEYIDGDDISNFSRAE 446
E DV + D + + +R E
Sbjct: 321 RI--EGADVRHDAQDGVPDEARRE 342
>gi|332879823|ref|ZP_08447512.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332682200|gb|EGJ55108.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 396
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/362 (35%), Positives = 196/362 (54%), Gaps = 46/362 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ ++ + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQYV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLSAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVIENLPFLLSDTVGFIRKLPTQLIESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID + E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTHE 326
Query: 428 MGDVEYIDGDDIS------NFSRAEDKDTTSEPV--DVECIDNYGGDDADNNDGFVSEDL 479
+ I DD++ +F+ E K T + V DV I ++ + V E +
Sbjct: 327 V-----IAEDDLATERTTKHFTLEEWKQTWMQKVGKDVLFISALNKENLEEFRKVVYEKV 381
Query: 480 GE 481
E
Sbjct: 382 KE 383
>gi|71908592|ref|YP_286179.1| GTP-binding protein, HSR1-related [Dechloromonas aromatica RCB]
gi|71848213|gb|AAZ47709.1| GTP-binding protein HflX [Dechloromonas aromatica RCB]
Length = 384
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 195/366 (53%), Gaps = 42/366 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G V+ I+ I + D + N LS QQRNLERA V+DR LI++IF
Sbjct: 56 TFAGKGKVDEIEAMIAATSA----DLVIFNHDLSPAQQRNLERALRCRVIDRTSLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G G RG
Sbjct: 112 ALRASSAEGKLQVELAQLEHLSTRLVR-------------GWTHLERQRG-GIGMRG--- 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GE +L+ RR + R L ++ ++ R R VQR AR+R + +V++VGYTN
Sbjct: 155 -PGEKQLETDRRLLGNRVKLLKERLNKLSRQRGVQRKARKRGD------VLSVSLVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL +AL+ + +++ +LFATLD + + + +G +++SDTVGFI +LP LVDAF
Sbjct: 208 AGKSTLFNALTHAGVYAADKLFATLDTTSRKLWIEGAGNIVISDTVGFIRNLPHSLVDAF 267
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
HATLE +AD+L+HV+D + +E V +VLQ++G + ++ +I WNKID D
Sbjct: 268 HATLEAATDADILLHVVDSASHARDEQMIEVNKVLQEIGA--DAVRQVI-AWNKIDLTDA 324
Query: 427 EMGDVEYIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDDADNNDGFVSEDLGESMN 484
G ++ D+ N +R + E +D+ E + Y A + L E+
Sbjct: 325 SPG----VERDEYGNIARVRVSARSGEGLDLLRESLAEYARAKAQAR----QKALAEAEK 376
Query: 485 KNHNDY 490
+ DY
Sbjct: 377 QAQYDY 382
>gi|259502374|ref|ZP_05745276.1| GTP-binding protein HflX [Lactobacillus antri DSM 16041]
gi|259169636|gb|EEW54131.1| GTP-binding protein HflX [Lactobacillus antri DSM 16041]
Length = 424
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 176/330 (53%), Gaps = 40/330 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G V I + ++ I N LS Q RNLE GK +LDR LI+EIF
Sbjct: 56 TYFGKGKV----AEIAELAAANDVTTIITNDELSPSQLRNLEDETGKRILDRTALILEIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ ++A L Y RL R++ + +TG GG GF +
Sbjct: 112 ATRAQTKEAKLQVQIAELQY---RLPRLQTSASQRLDQQTG------------GGSGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I +HL ++ + ++ +R R + + T A+VGYT
Sbjct: 157 RGAGETKLEMDRRTIQHHITHLRHELAAIDKSEETKRKQRAKSN------IPTAALVGYT 210
Query: 307 NAGKSTLVS-------ALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
NAGKST+++ A+ D +F LFATLD ++ + LP K LLSDTVGF+S L
Sbjct: 211 NAGKSTIMNGLVRRYGAVEDKTVFEKDMLFATLDTSVRRLTLPGRKDFLLSDTVGFVSKL 270
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P LV++F +TL E ADLL+ V+D + PN EE T + L+Q+G+ M+ V+
Sbjct: 271 PTNLVESFKSTLAEAANADLLIQVIDYSDPNYEEMMQTTKETLKQIGIDNIP---MVNVF 327
Query: 419 NKIDYHDEEMGDVEYIDGDDISNFSRAEDK 448
NK D + E +E GDD S +D+
Sbjct: 328 NKADKTEIEFPVLE---GDDQVVISAKQDE 354
>gi|295132086|ref|YP_003582762.1| HflX-like GTP-binding protein [Zunongwangia profunda SM-A87]
gi|294980101|gb|ADF50566.1| HflX-like GTP-binding protein [Zunongwangia profunda SM-A87]
Length = 406
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 183/324 (56%), Gaps = 34/324 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ ++ S+ E+ + LS QQ+N+E+ VLDR LI++IF
Sbjct: 60 TFIGSGKMEEVRIYV----SENEIGTAIFDDELSPAQQKNIEKILKCKVLDRTNLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYARTQVELAQYEYLLPRLA------GMWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + ++ S L ++ + + VQR R + L VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDKISLLKKKLATIDKQMEVQRGNRGQ--------LVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNTISKSEVFAENKLFATLDTTVRKVVIRNLPFLLTDTVGFIRKLPTQLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHDE 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ S+ K + V+NKID Y E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEEHIDSVNQILDEIKSSD---KPSVMVFNKIDQYVPE 326
Query: 427 EMGDVEYIDGDDISNFSRAEDKDT 450
E+ + + + ++++ E K T
Sbjct: 327 EIAEDDLMTERTTAHYTLTEWKQT 350
>gi|116620284|ref|YP_822440.1| HSR1-like GTP-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223446|gb|ABJ82155.1| GTP-binding protein, HSR1-related [Candidatus Solibacter usitatus
Ellin6076]
Length = 394
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 168/302 (55%), Gaps = 42/302 (13%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T G G VE + + E+ D + + LS QQRNLE+A V+DR LI++
Sbjct: 9 AATLIGQGKVEELAASVLSTEA----DVVIFDQDLSPTQQRNLEKALATKVIDRTQLILD 64
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A T+E +LQ ELA L Y RL GRG
Sbjct: 65 IFASRARTREGRLQVELAQLNYLLPRLA-----------------------GRGVQMSRL 101
Query: 246 ISGAG-----ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
G G ET+L+ RRRI +R + ++E VR RA+ R RRR LAT+
Sbjct: 102 GGGIGTRGPGETQLETDRRRIAKRIKKVEDELEGVRAGRALHR--RRRSAVP----LATL 155
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
A+ GYTNAGKSTL + L+ + + +D+++FATLDP ++ +VLPS + VL+SDTVGFI +LP
Sbjct: 156 ALAGYTNAGKSTLFNRLTRASVLADSKMFATLDPTVRPLVLPSRRRVLMSDTVGFIRNLP 215
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV AF ATLEEV EA L++HV+D ++P EH VL+VL ++G E I V N
Sbjct: 216 TTLVKAFRATLEEVNEAALILHVVDASSPTAPEHTAHVLKVLAEIGAHEVP---QILVLN 272
Query: 420 KI 421
K+
Sbjct: 273 KV 274
>gi|312869660|ref|ZP_07729808.1| GTP-binding protein HflX [Lactobacillus oris PB013-T2-3]
gi|417885231|ref|ZP_12529386.1| GTP-binding protein HflX [Lactobacillus oris F0423]
gi|311094794|gb|EFQ53090.1| GTP-binding protein HflX [Lactobacillus oris PB013-T2-3]
gi|341595886|gb|EGS38523.1| GTP-binding protein HflX [Lactobacillus oris F0423]
Length = 424
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 172/320 (53%), Gaps = 40/320 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G V I + ++ I N LS Q RNLE GK +LDR LI+EIF
Sbjct: 56 TYFGKGKV----AEIAELAAANDVATIITNDELSPSQLRNLEDETGKRILDRTALILEIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ ++A L Y RL R++ + +TG GG GF +
Sbjct: 112 ATRAQTKEAKLQVQIAELQY---RLPRLQTSASQRLDQQTG------------GGSGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I + +HL ++ + ++ +R R + + T A+VGYT
Sbjct: 157 RGAGETKLEMDRRTIQHQITHLRHELAAIDKSEETKRKQRAKSN------IPTAALVGYT 210
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
NAGKST+++ L D +F LFATLD ++ + LP K LLSDTVGF+S L
Sbjct: 211 NAGKSTIMNGLVRRYGTVEDKTVFEKDMLFATLDTSVRRLTLPGKKDFLLSDTVGFVSKL 270
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P LV++F +TL E ADLL+ V+D + PN EE T + L+Q+G+ M+ V+
Sbjct: 271 PTNLVESFKSTLAEAANADLLIQVIDYSDPNYEEMMQTTKETLKQIGIDNIP---MVNVF 327
Query: 419 NKIDYHDEEMGDVEYIDGDD 438
NK D + E +E GDD
Sbjct: 328 NKADKTEIEFPVLE---GDD 344
>gi|213962424|ref|ZP_03390687.1| GTP-binding protein HflX [Capnocytophaga sputigena Capno]
gi|213955090|gb|EEB66409.1| GTP-binding protein HflX [Capnocytophaga sputigena Capno]
Length = 401
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 175/304 (57%), Gaps = 34/304 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLSAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVIENLPFLLSDTVGFIRKLPTQLIESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHDE 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTNE 326
Query: 427 EMGD 430
E+ +
Sbjct: 327 EIAE 330
>gi|153808667|ref|ZP_01961335.1| hypothetical protein BACCAC_02966 [Bacteroides caccae ATCC 43185]
gi|423220751|ref|ZP_17207245.1| GTP-binding protein HflX [Bacteroides caccae CL03T12C61]
gi|149128493|gb|EDM19711.1| GTP-binding protein HflX [Bacteroides caccae ATCC 43185]
gi|392622797|gb|EIY16912.1| GTP-binding protein HflX [Bacteroides caccae CL03T12C61]
Length = 418
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 182/334 (54%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I N E + E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIKQYIRNEEEEERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTMMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 249 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPGF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L ++G K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLAEIGGGG---KPMILVFNKIDAY 339
>gi|380510806|ref|ZP_09854213.1| GTP-binding protein [Xanthomonas sacchari NCPPB 4393]
Length = 441
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 179/319 (56%), Gaps = 32/319 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E +K A++ G D + VN LS Q+RNLE+ + V+DR GLI++IF
Sbjct: 56 TLIGSGKLEEVKA---AADASGA-DLVLVNHALSPGQERNLEKYLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG GS G +
Sbjct: 112 AQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-GSIG---LR 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++E+V R AR R L +AVVGYTN
Sbjct: 155 GPGETQLETDRRLLQKRVEQLQKRLEKVEVQHTQMRRARVRSE------LPRIAVVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +AL+ ++ ++ +LFATLDP ++ + LP G +L+DTVGF+ +LP +LV AF
Sbjct: 209 AGKSTLFNALTGAEAYAADQLFATLDPTVRRIALPGGNAMLADTVGFVRNLPHELVAAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL E EADLL+HV+D P EE V +VL VG E L ++ V+NKID D
Sbjct: 269 STLSEAREADLLLHVVDAADPLREERIAQVDEVLHAVGAGE--LPQLL-VFNKIDRIDG- 324
Query: 428 MGDVEYIDGDDISNFSRAE 446
+V + D + + +R E
Sbjct: 325 -AEVRHDAQDGVPDTARRE 342
>gi|256819322|ref|YP_003140601.1| GTP-binding proten HflX [Capnocytophaga ochracea DSM 7271]
gi|315224767|ref|ZP_07866589.1| GTP-binding protein HflX [Capnocytophaga ochracea F0287]
gi|420160213|ref|ZP_14666998.1| GTP-binding protein HflX [Capnocytophaga ochracea str. Holt 25]
gi|256580905|gb|ACU92040.1| GTP-binding proten HflX [Capnocytophaga ochracea DSM 7271]
gi|314945260|gb|EFS97287.1| GTP-binding protein HflX [Capnocytophaga ochracea F0287]
gi|394760793|gb|EJF43284.1| GTP-binding protein HflX [Capnocytophaga ochracea str. Holt 25]
Length = 401
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 175/304 (57%), Gaps = 34/304 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLTAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVIENLPFLLSDTVGFIRKLPTQLIESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHDE 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTNE 326
Query: 427 EMGD 430
E+ +
Sbjct: 327 EIAE 330
>gi|429747743|ref|ZP_19280991.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 380 str.
F0488]
gi|429162422|gb|EKY04743.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 380 str.
F0488]
Length = 401
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 175/304 (57%), Gaps = 34/304 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLTAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVIENLPFLLSDTVGFIRKLPTQLIESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHDE 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTNE 326
Query: 427 EMGD 430
E+ +
Sbjct: 327 EIAE 330
>gi|336416539|ref|ZP_08596872.1| GTP-binding protein HflX [Bacteroides ovatus 3_8_47FAA]
gi|335937596|gb|EGM99494.1| GTP-binding protein HflX [Bacteroides ovatus 3_8_47FAA]
Length = 420
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 184/334 (55%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F E VV+ + K A + T+ G G +E I+ +I+ E ++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIRQYIHDEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ ++ + +A QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLADIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTMMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LV++F +TL+EV EADLLVHV+D + P
Sbjct: 249 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVESFKSTLDEVREADLLVHVVDISHPGF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L ++G S K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLAEIGGSG---KPMILVFNKIDAY 339
>gi|366052541|ref|ZP_09450263.1| GTP-binding protein HflX [Lactobacillus suebicus KCTC 3549]
Length = 428
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/322 (38%), Positives = 174/322 (54%), Gaps = 39/322 (12%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G VE + + + + I N LS Q RNLE A V+DR LI+E
Sbjct: 55 AATYFGKGKVEELAELV----AATNVATIVTNDELSPSQIRNLEEATKARVMDRTALILE 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A +KEAKLQ E+A L Y+ RL + RL + G+GG F
Sbjct: 111 IFAKRAQSKEAKLQVEIAQLQYRLPRLKT--SANQRLD------------QQTGAGGGSF 156
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L++ RR I +HL ++ E+ ++ QR R D RG+ T A+VG
Sbjct: 157 TNRGSGETKLEMNRRTIQNAITHLRGELAELNKSSETQRQQR------DKRGIPTAALVG 210
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
YTNAGKST+++ L + +F LFATLD ++ + LP K LLSDTVGF+S
Sbjct: 211 YTNAGKSTIMNGLVREFGIDDEKQVFEKNMLFATLDTSVRQLTLPDQKQFLLSDTVGFVS 270
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP LV+AF +TL E ADLL+ V+D + P+ +E T L+++G+ + MI
Sbjct: 271 KLPTHLVEAFKSTLAEAANADLLIQVIDYSDPHYQEMMQTTENTLKEIGIKDIP---MIL 327
Query: 417 VWNKIDYHDEEMGDVEYIDGDD 438
V+NK D + + +DGDD
Sbjct: 328 VFNKADKMEVQF---PTMDGDD 346
>gi|429755468|ref|ZP_19288120.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 324 str.
F0483]
gi|429174206|gb|EKY15692.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 324 str.
F0483]
Length = 401
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 175/304 (57%), Gaps = 34/304 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLTAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVIENLPFLLSDTVGFIRKLPTQLIESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHDE 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTNE 326
Query: 427 EMGD 430
E+ +
Sbjct: 327 EIAE 330
>gi|219849958|ref|YP_002464391.1| GTP-binding proten HflX [Chloroflexus aggregans DSM 9485]
gi|219544217|gb|ACL25955.1| GTP-binding proten HflX [Chloroflexus aggregans DSM 9485]
Length = 461
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 167/295 (56%), Gaps = 23/295 (7%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F GPG V+ + + + D I + LS Q RNLE V+DR LI++IF
Sbjct: 86 FIGPGKVK----EVAALREQTQADLIVFDDELSPAQIRNLEEELQTQVIDRTALILDIFA 141
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA T E +LQ ELA Y RL R + T E G G + G
Sbjct: 142 RHARTHEGRLQVELAQYQYLLPRLRR------QWTHLERQTGTSGGTSAGGMVG---LRG 192
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I R + L Q+ +V R R + R RR+ G + +A+VGYTNA
Sbjct: 193 PGETQLEIDRRLIERRIAWLKEQLADVHRHRELYRQRRRQTG------VPIIALVGYTNA 246
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKV-LLSDTVGFISDLPLQLVDAFH 367
GKSTL++A++ +D+ ++ +LFATLDP + V+LP V L++DTVGFI LP QL+ AF
Sbjct: 247 GKSTLLNAMTGADVLAEDKLFATLDPTTRQVLLPGNTVALMTDTVGFIQKLPPQLIAAFR 306
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEE+ EADLL+HV+D T N +EH TV Q L+++ V K ++ V NKID
Sbjct: 307 ATLEEIEEADLLLHVVDVTHRNAQEHAQTVEQTLRELKVDH---KPILTVLNKID 358
>gi|114564471|ref|YP_751985.1| HSR1-like GTP-binding protein [Shewanella frigidimarina NCIMB 400]
gi|114335764|gb|ABI73146.1| GTP-binding protein, HSR1-related [Shewanella frigidimarina NCIMB
400]
Length = 435
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 176/305 (57%), Gaps = 31/305 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E + + E+ + + N LS Q+RNLE VLDR LI++IF
Sbjct: 57 FIGSGKAEELAAMVAATEA----NVVIFNHALSPAQERNLEVVCQCRVLDRTTLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E K+Q ELA L + +RL+R G T R GG G + G
Sbjct: 113 QRARTHEGKMQVELAQLRHMSTRLIR----------GWTHLE-------RQKGGIG-MRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R ++ ++++V + R R AR+R SD LATV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRGRIKNINRRLDKVDKQREQSRRARKR---SD---LATVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHA 368
GKSTL +AL+ SD+++ +LFATLDP L+ + LP G V+L+DTVGFI LP LV AF A
Sbjct: 209 GKSTLFNALTSSDVYAADQLFATLDPTLRKLSLPDGAVILADTVGFIRHLPHDLVAAFKA 268
Query: 369 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEM 428
TL+E +A++L+HV+DC N+ E+ V +VL+++ E + +I V NKID ++
Sbjct: 269 TLQETRQAEILLHVVDCADDNMTENFDQVQKVLEEIDADE--ITQLI-VCNKIDLLEDFA 325
Query: 429 GDVEY 433
++Y
Sbjct: 326 PRIDY 330
>gi|433675994|ref|ZP_20508158.1| tRNA modification GTPase mnmE [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430818882|emb|CCP38417.1| tRNA modification GTPase mnmE [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 441
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/324 (39%), Positives = 179/324 (55%), Gaps = 32/324 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D I VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKA---AAEASGA-DLILVNHALSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RL+R G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLIR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R AR R L +AV
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQKRLEKVEVQHTQMRRARVRSE------LPRIAV 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL +AL+ ++ ++ +LFATLDP ++ + LP G +L+DTVGF+ +LP +L
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYAADQLFATLDPTVRRIALPGGNAMLADTVGFVRNLPHEL 263
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E EAD L+HV+D P EE V +VL VG + L ++ V+NKID
Sbjct: 264 VAAFRSTLSEAREADFLLHVVDAADPLREERIAQVDEVLHAVGAGD--LPQLL-VFNKID 320
Query: 423 YHDEEMGDVEYIDGDDISNFSRAE 446
E DV + D + + +R E
Sbjct: 321 RI--EGADVRHDAQDGVPDEARRE 342
>gi|429752639|ref|ZP_19285483.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 326 str.
F0382]
gi|429176070|gb|EKY17474.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 326 str.
F0382]
Length = 401
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 175/304 (57%), Gaps = 34/304 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ + + E+ + + L+ QQ+N+ER +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQFV----EENEVGTVIFDDELTPAQQKNIERILKAKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLTAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVIENLPFLLSDTVGFIRKLPTQLIESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHDE 426
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID Y +E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSAD---KPTIMVFNKIDAYTNE 326
Query: 427 EMGD 430
E+ +
Sbjct: 327 EIAE 330
>gi|291562499|emb|CBL41315.1| GTP-binding protein HflX [butyrate-producing bacterium SS3/4]
Length = 417
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 172/299 (57%), Gaps = 32/299 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G ++ +K + + + G + + LS Q +NLE A V+DR +I++IF
Sbjct: 60 TYLGKGKIQELKEMVWESGATG----VVCDDELSPAQLKNLEDALDTKVMDRTMIILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A A T+E K+Q ELA L Y+ RLV +R RL G
Sbjct: 116 AARAKTREGKIQVELAQLRYRAVRLVGLRNSLSRLGGGIGTRG----------------- 158
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L++ RRRI ER S L S++++V R R V R R + G T A+VGYTN
Sbjct: 159 -PGETKLEVDRRRIHERISQLKSELQDVERHRDVVRKQREQSGT------LTAAIVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAF 366
AGKSTL++ L+ + + ++ +LFATLDP +++ LP G KVLL+DTVGFI LP LV+AF
Sbjct: 212 AGKSTLLNKLTGAGILAEDKLFATLDPTTRALTLPGGEKVLLTDTVGFIRKLPHHLVEAF 271
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
+TLEE D+++HV+DC+ P ++ V + L+++ + + K +I V+NK+D D
Sbjct: 272 KSTLEEARYCDVILHVVDCSNPQMDMQMHVVYETLRRLDIKD---KEIITVFNKVDRPD 327
>gi|423088531|ref|ZP_17076910.1| GTP-binding protein HflX [Clostridium difficile 70-100-2010]
gi|357559417|gb|EHJ40865.1| GTP-binding protein HflX [Clostridium difficile 70-100-2010]
Length = 425
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/311 (39%), Positives = 175/311 (56%), Gaps = 39/311 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE I +N + + IF N LS Q +NLE ++DR LI++IF
Sbjct: 55 YIGTGKVEEI---LNLIKKENIEIVIFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ ELA+L Y RL+ G + L GR SGG G +
Sbjct: 111 QRAKTREAKLQVELASLKYMLPRLI---GSNENL--------------GRQSGGVGTKNR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++++++ R QR+ RR+ L VA+VGYTN
Sbjct: 154 GSGEKKLELDRRRIEEKITSLNRELDDLKFQRETQRSMRRKSN------LPNVALVGYTN 207
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKS++++ L D +F LFATL+ ++++VL + K LLSDTVGF+S+LP
Sbjct: 208 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLANNKEFLLSDTVGFVSNLP 267
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 268 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLKQIGADGIP---MIHVYN 324
Query: 420 KIDYHDEEMGD 430
KID D E+ D
Sbjct: 325 KIDLIDVEVLD 335
>gi|147902718|ref|NP_001087175.1| putative GTP-binding protein 6 [Xenopus laevis]
gi|82182198|sp|Q6DCC6.1|GTPB6_XENLA RecName: Full=Putative GTP-binding protein 6
gi|50418397|gb|AAH78122.1| MGC83645 protein [Xenopus laevis]
Length = 527
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 179/321 (55%), Gaps = 29/321 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQR 166
LP VV + + + FG G +T+ I G ++ A+F+N LS + ++
Sbjct: 141 LPNWSVVNTLIMSTKSPDSKLIFGKGNFQTLTDVIKGHP---QITAVFLNVERLSSLTEK 197
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
+E AWG V DR +++ IF +AHTKEAKLQ LA L +S L
Sbjct: 198 EMEEAWGVKVFDRYTVVLNIFRFNAHTKEAKLQIALAELPLLRSSL-------------- 243
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
+ E +G G R +I G+GET L++Q+R + ER + +E+V++ R + R R
Sbjct: 244 --KNETAHMDQQGGGSR-YIMGSGETFLEVQQRLLKEREIKIKYALEKVKKKRNLLRTQR 300
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGK 345
RR R ++++GYTN+GK+TL+ AL+ D L +LFATLD + +LP
Sbjct: 301 RR------REFPIISILGYTNSGKTTLIKALTGDEGLQPRDQLFATLDVTSHAGLLPCHM 354
Query: 346 -VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 404
V+ DT+GF+S LP L+++F ATLE+VV +DLL+HV D + P + + +VL VL+ +
Sbjct: 355 PVIYVDTIGFLSQLPHNLIESFSATLEDVVHSDLLIHVRDISHPETTKQKASVLSVLKNL 414
Query: 405 GVSEEKLKNMIEVWNKIDYHD 425
G+ ++ L MIEV NKID D
Sbjct: 415 GLPQQLLDTMIEVQNKIDLID 435
>gi|218258196|ref|ZP_03474598.1| hypothetical protein PRABACTJOHN_00252 [Parabacteroides johnsonii
DSM 18315]
gi|218225691|gb|EEC98341.1| hypothetical protein PRABACTJOHN_00252 [Parabacteroides johnsonii
DSM 18315]
Length = 403
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 168/295 (56%), Gaps = 33/295 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q RN+E+ +LDR LI++IF
Sbjct: 62 TFVGSGKLQEIKEYV----VENEIGLVIFDDELSAKQLRNIEKELQVKILDRTNLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 ARRAQTAHAKTQVELAQYKYMLPRLTRLW-----------------THLERQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ +R IL++ S L + E+ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGETQLETDKRIILDKISKLKRDLVEIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ LS SD+F++ +LFATLD ++ V++ + LLSDTVGFI LP +LV++F
Sbjct: 212 VGKSTLMNQLSKSDVFAENKLFATLDTTVRKVIVDNLPFLLSDTVGFIRKLPTELVESFK 271
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV EADLLVHV+D + P EE V + L ++ +E K MI V+NKID
Sbjct: 272 STLDEVREADLLVHVVDISHPTFEEQIEVVNRTLSEIDKAE---KPMIMVFNKID 323
>gi|423342807|ref|ZP_17320521.1| GTP-binding protein HflX [Parabacteroides johnsonii CL02T12C29]
gi|409217062|gb|EKN10041.1| GTP-binding protein HflX [Parabacteroides johnsonii CL02T12C29]
Length = 403
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 168/295 (56%), Gaps = 33/295 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q RN+E+ +LDR LI++IF
Sbjct: 62 TFVGSGKLQEIKGYV----VENEIGLVIFDDELSAKQLRNIEKELQVKILDRTNLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 ARRAQTAHAKTQVELAQYKYMLPRLTRLW-----------------THLERQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ +R IL++ S L + E+ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGETQLETDKRIILDKISKLKRDLVEIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ LS SD+F++ +LFATLD ++ V++ + LLSDTVGFI LP +LV++F
Sbjct: 212 VGKSTLMNQLSKSDVFAENKLFATLDTTVRKVIVDNLPFLLSDTVGFIRKLPTELVESFK 271
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV EADLLVHV+D + P EE V + L ++ +E K MI V+NKID
Sbjct: 272 STLDEVREADLLVHVVDISHPTFEEQIEVVNRTLSEIDKAE---KPMIMVFNKID 323
>gi|90962408|ref|YP_536324.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|301300241|ref|ZP_07206453.1| GTP-binding protein HflX [Lactobacillus salivarius ACS-116-V-Col5a]
gi|90821602|gb|ABE00241.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|300852182|gb|EFK79854.1| GTP-binding protein HflX [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 419
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 171/306 (55%), Gaps = 35/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G E I+ H+ ++D + VNA L+ Q RNLE G V+DR LI+E
Sbjct: 47 AATYFGKGKAEEIR-HVGEI---NDIDTLIVNAELTPTQLRNLEDITGLQVIDRTALILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ ++A L Y+ RL T + + G+ G G+
Sbjct: 103 IFASRAQTKEAKLQVQIAKLQYQLPRL-------------RTSSINRMDQQTAGNTGGGY 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L+L +R I +R S+L +++E+ QR AR R + TVA+VG
Sbjct: 150 TNRGSGETKLELNKRVIEKRISNLSKELKEIESVHENQRRARERS------SIKTVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
YTNAGKST ++ L ++ ++F LFATLD ++ + LP K LSDTVGF+S
Sbjct: 204 YTNAGKSTTMNGLLKLLEQPTNKEVFEKDMLFATLDTSIRKIKLPDNKEFFLSDTVGFVS 263
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
DLP QLV AF TL E +ADLL+ V+D + + ++ T Q L ++GV + MI
Sbjct: 264 DLPHQLVKAFRTTLSEANQADLLIQVIDGSDEHAKDMIETTKQTLDEIGVKDIP---MIY 320
Query: 417 VWNKID 422
+NK D
Sbjct: 321 AYNKSD 326
>gi|227530101|ref|ZP_03960150.1| GTP-binding protein HflX [Lactobacillus vaginalis ATCC 49540]
gi|227349983|gb|EEJ40274.1| GTP-binding protein HflX [Lactobacillus vaginalis ATCC 49540]
Length = 424
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 179/322 (55%), Gaps = 44/322 (13%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G V+ IK + AE+ + + N L+ Q RNLE G VLDR LI+EIF
Sbjct: 55 TYFGSGKVDEIKEAV-LAEN---VSTVITNDELTPSQLRNLEDELGCRVLDRTALILEIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y RL R++ + +TG GG GF +
Sbjct: 111 AERAQSKEAKLQVQIAELQY---RLPRLQTSANQRLDQQTG------------GGSGFTN 155
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G+GET+L++ RR I SHL ++ + R+ V+R R D + T A+VGYT
Sbjct: 156 RGSGETKLEMNRRTIQNSISHLRKELRVIDRSEEVKRKQR------DKSAIPTAALVGYT 209
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
NAGKST+++ L D +F LFATLD ++ + LP K LLSDTVGF+S L
Sbjct: 210 NAGKSTIMNGLVEKYGAGEDKTVFEKDMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKL 269
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P LV++F +TL E ADLL+ V+D + P+ E+ T + L+Q+G+ E + M+ V+
Sbjct: 270 PTHLVESFKSTLAEAANADLLIQVIDASDPHYEDMMKTTQETLKQIGI--ENIP-MLYVF 326
Query: 419 NKIDYHDEEMGDVEY--IDGDD 438
NK D D+EY ++GDD
Sbjct: 327 NKAD-----KTDMEYPVLEGDD 343
>gi|294508447|ref|YP_003572505.1| GTP-binding protein hflX [Salinibacter ruber M8]
gi|294344775|emb|CBH25553.1| GTP-binding protein hflX [Salinibacter ruber M8]
Length = 455
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 170/296 (57%), Gaps = 34/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G V+ + +S D + + LS +Q +N+E+ +LDR GLI++IF
Sbjct: 62 TFIGSGKVKELARLTKERDS----DLVIFDDELSPVQVKNIEKKIDCKLLDRTGLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T+ AK Q ELA L Y +SRL R R T R GG G
Sbjct: 118 ASRAQTRAAKTQVELAQLGYLRSRLTR------RWTH-----------LSRQEGGIG-TK 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE ++++ RR I +R + L +++E+ R R QR R G T ++VGYTN
Sbjct: 160 GPGEKQIEMDRRIIDKRMAKLREKLDEIDRQRTTQRKGRE--------GYTTASLVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
AGKSTL++AL+D DL ++ RLFATLD ++V L S K VL+SDTVGFI LP +L+++F
Sbjct: 212 AGKSTLLNALADEDLEAEDRLFATLDATTRTVELDSNKEVLMSDTVGFIRKLPHRLIESF 271
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV E+D+L+HV+D T PN EE V + L G E + K + V+NKID
Sbjct: 272 RSTLDEVRESDVLIHVVDVTHPNYEEQMRVVAETL---GELEARDKPTLVVFNKID 324
>gi|330999637|ref|ZP_08323346.1| GTP-binding protein HflX [Parasutterella excrementihominis YIT
11859]
gi|329574143|gb|EGG55719.1| GTP-binding protein HflX [Parasutterella excrementihominis YIT
11859]
Length = 387
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 171/298 (57%), Gaps = 35/298 (11%)
Query: 128 TFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
TF G G +E IK NGA+ A+ + LS QQRN+E+A G VLDR LI+E
Sbjct: 60 TFLGSGKIEEIKSEALANGAK------ALIFDVALSPAQQRNIEKAVGIEVLDRTNLILE 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T+E +LQ ELA L + +RLVR G + RG G
Sbjct: 114 IFRQRAKTREGRLQVELARLTHLSTRLVR-------------GWTHLERQRG----GLSK 156
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GE +++L RR I R L Q++++ R R QR +R+R + TVA+VGY
Sbjct: 157 TGGPGEKQIELDRRMIATRVKALREQLKKLERQRNTQRKSRQRGE------VLTVALVGY 210
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ +++ +LFATLD + + +V+LSDTVGFI LP QL++
Sbjct: 211 TNAGKSTLFNRLTRGGVYAADQLFATLDTTARRCFVGGDVEVVLSDTVGFIRGLPHQLIE 270
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF +TL+E +ADLL+HV+D + P EE T V +VL+++G + + ++ V+NKID
Sbjct: 271 AFKSTLDEAAQADLLLHVVDSSTPAREEQMTEVNKVLEEIGAKD--IPQLL-VFNKID 325
>gi|374334904|ref|YP_005091591.1| GTPase, HflX [Oceanimonas sp. GK1]
gi|372984591|gb|AEY00841.1| GTPase, HflX [Oceanimonas sp. GK1]
Length = 428
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 172/298 (57%), Gaps = 32/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE + + ++ D + N LS Q+RNLER VLDR GLI++IF
Sbjct: 57 FIGTGKVEELASLVQMHQA----DVVIFNHSLSPAQERNLEREVKCRVLDRTGLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER ++ ++E+V R R R AR+R+ + T+++VGYTNA
Sbjct: 155 PGETQLETDRRLLRERIKYIQKRLEKVSRQREQGRRARQRNE------IPTLSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L++SD+++ +LFATLDP L+ + LP +G +L+DTVGFI LP LV AF
Sbjct: 209 GKSTLFNRLTESDVYAADQLFATLDPTLRKIELPDAGLAILADTVGFIRHLPHDLVAAFK 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
ATL+E +ADLL+HV+DC + ++ V VL+Q+ E ++ V+NKID D
Sbjct: 269 ATLQETRDADLLLHVVDCADEQMRDNIDEVNSVLEQIEADE---IPVLMVFNKIDKLD 323
>gi|126662689|ref|ZP_01733688.1| GTP-binding protein HflX [Flavobacteria bacterium BAL38]
gi|126626068|gb|EAZ96757.1| GTP-binding protein HflX [Flavobacteria bacterium BAL38]
Length = 407
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 198/394 (50%), Gaps = 46/394 (11%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
+ N EE+ + Y D F VV+ S K K TF G G +E IK +I
Sbjct: 16 GIVTQNQSEEKLNEYLDELEFLTFTAGGTVVKRFSQKMDKPNPKTFVGTGKLEEIKYYIK 75
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
++ + + L+ Q +N+ + VLDR LI++IF A T A+ Q ELA
Sbjct: 76 D----NDIKTVIFDDELTPSQSKNITKELDCKVLDRTNLILDIFAQRAETSYARTQVELA 131
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL G T E R GG G + G GETE++ RR + +
Sbjct: 132 QCQYLLPRLT------GMWTHLE-----------RQKGGIG-MRGPGETEIETDRRIVRD 173
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R S L +I+ + + A QR+ R + VA+VGYTN GKSTL++A+ SD+F
Sbjct: 174 RISLLKEKIKVIDKQMATQRSNRG--------AMVRVALVGYTNVGKSTLMNAVGKSDVF 225
Query: 324 SDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVL 383
+ +LFATLD ++ V+ + LLSDTVGFI LP QLV++F +TL+EV EADLL+HV+
Sbjct: 226 VENKLFATLDTTVRKTVIKNLPFLLSDTVGFIRKLPTQLVESFKSTLDEVREADLLLHVV 285
Query: 384 DCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHDEEMGDVEYIDGDDISNF 442
D + P EEH +V ++L + ++ K I V+NKID YH Y D +D+S
Sbjct: 286 DISHPEFEEHIASVNKILLDIKSAD---KPTIMVFNKIDAYHP------VYFDENDLS-- 334
Query: 443 SRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVS 476
+ TT E + + +NN F+S
Sbjct: 335 ----IEKTTKHYTLEEWQNTWMSKLGENNTLFIS 364
>gi|88798920|ref|ZP_01114502.1| GTPase [Reinekea blandensis MED297]
gi|88778400|gb|EAR09593.1| GTPase [Reinekea blandensis MED297]
Length = 436
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 172/299 (57%), Gaps = 32/299 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I+ + E+ D + N LS Q+RN+E VLDR GLI++IF
Sbjct: 58 FVGTGKMEEIRQAVKTYEA----DVVLFNHALSPSQERNIEAGIECRVLDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L Y+ +RLVR G T R GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLQYQSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R S + ++ +V + R R AR R SD TV++VGYTNA
Sbjct: 156 PGETQLETDRRLLRARISTIHKKLNKVEKQRNQSRRARDR---SD---TPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+DS +++ +LFATLDP L+ + +P G ++L+DTVGFI LP +LV+AF
Sbjct: 210 GKSTLFNYLTDSGVYAADQLFATLDPTLRRLAIPDMGDIVLADTVGFIRHLPHKLVEAFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATL+E EADLL+HV+DC + + V VL ++G S+ +EV+NKID D+
Sbjct: 270 ATLQETAEADLLLHVVDCADEDRLGNIEQVENVLDEIGSSD---IPRLEVFNKIDLLDD 325
>gi|402493727|ref|ZP_10840477.1| GTP-binding protein HflX [Aquimarina agarilytica ZC1]
Length = 409
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 181/328 (55%), Gaps = 38/328 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + K + TF G G +E ++ ++ + ++ + + L+ QQ+N+E+
Sbjct: 45 VVKRFTQKMQMPNSKTFIGSGKMEEVQAYV----EQHDIGTVVFDDELTPSQQKNIEKIL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
++DR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 KAKIIDRTNLILDIFAQRAQTSYARTQVELAQYQYLLPRLA------GMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + +R S L ++++ + R A QR R +
Sbjct: 149 -----RQKGGIG-MRGPGETEIETDRRIVRDRISLLKNKLKTIDRQMATQRGNRGK---- 198
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTV 352
L VA+VGYTN GKSTL++ +S S +F++ +LFATLD ++ VV+ + LLSDTV
Sbjct: 199 ----LVRVALVGYTNVGKSTLMNVISKSKVFAENKLFATLDTTVRKVVIGNLPFLLSDTV 254
Query: 353 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 412
GFI LP QLV++F +TL+EV EADLL+HV+D + P E+H +V +L ++ + K
Sbjct: 255 GFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHPQFEDHIESVNTILNEIDCKD---K 311
Query: 413 NMIEVWNKIDYHDEEMGDVEYIDGDDIS 440
I V+NKID + E ID DD++
Sbjct: 312 RTIMVFNKIDAYTHET-----IDDDDLT 334
>gi|83814057|ref|YP_446511.1| GTPase [Salinibacter ruber DSM 13855]
gi|83755451|gb|ABC43564.1| GTPase of unknown function subfamily, putative [Salinibacter ruber
DSM 13855]
Length = 427
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 170/296 (57%), Gaps = 34/296 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G V+ + +S D + + LS +Q +N+E+ +LDR GLI++IF
Sbjct: 34 TFIGSGKVKELARLTKERDS----DLVISDDELSPVQVKNIEKKIDCKLLDRTGLILDIF 89
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T+ AK Q ELA L Y +SRL R R T R GG G
Sbjct: 90 ASRAQTRAAKTQVELAQLGYLRSRLTR------RWTH-----------LSRQEGGIG-TK 131
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE ++++ RR I +R + L +++E+ R R QR R G T ++VGYTN
Sbjct: 132 GPGEKQIEMDRRIIDKRMAKLREKLDEIDRQRTTQRKGRE--------GYTTASLVGYTN 183
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
AGKSTL++AL+D DL ++ RLFATLD ++V L S K VL+SDTVGFI LP +L+++F
Sbjct: 184 AGKSTLLNALADEDLEAEDRLFATLDATTRTVELDSNKEVLMSDTVGFIRKLPHRLIESF 243
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV E+D+L+HV+D T PN EE V + L G E + K + V+NKID
Sbjct: 244 RSTLDEVRESDVLIHVVDVTHPNYEEQMRVVAETL---GELEARDKPTLVVFNKID 296
>gi|357042108|ref|ZP_09103814.1| GTP-binding protein HflX [Prevotella histicola F0411]
gi|355369567|gb|EHG16958.1| GTP-binding protein HflX [Prevotella histicola F0411]
Length = 420
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 175/301 (58%), Gaps = 22/301 (7%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGE-LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLII 184
A T+ G G +E I+ +I E + + + + LS Q RN+E+ G +LDR LI+
Sbjct: 60 AVTYVGKGKLEEIREYIKLKEDADDPIGMVIFDDELSAKQMRNIEQELGVKILDRTSLIL 119
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
+IF A T AK Q ELA Y RL R+ E + + G G
Sbjct: 120 DIFAMRAQTANAKTQVELAQYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSV 170
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GET+L++ RR IL+R S L ++ E+ + +A QR R R L VA+VG
Sbjct: 171 GLRGPGETQLEMDRRIILQRMSLLKQRLTEIDKQKATQRKNRGR--------LIRVALVG 222
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVD 364
YTN GKST+++ L+ S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP LV+
Sbjct: 223 YTNVGKSTIMNLLAKSEVFAENKLFATLDTTVRKVVVENLPFLLADTVGFIRKLPTDLVE 282
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-Y 423
+F +TL+EV EADLLVHV+D + P+ EE V Q L ++G +++ +MI ++NKID Y
Sbjct: 283 SFKSTLDEVREADLLVHVVDISHPDFEEQIQVVNQTLAELGCADK--PSMI-IFNKIDNY 339
Query: 424 H 424
H
Sbjct: 340 H 340
>gi|270290754|ref|ZP_06196978.1| GTP-binding protein HflX [Pediococcus acidilactici 7_4]
gi|418068640|ref|ZP_12705922.1| GTPase [Pediococcus acidilactici MA18/5M]
gi|270280814|gb|EFA26648.1| GTP-binding protein HflX [Pediococcus acidilactici 7_4]
gi|357539376|gb|EHJ23395.1| GTPase [Pediococcus acidilactici MA18/5M]
Length = 430
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 171/306 (55%), Gaps = 35/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G +E + + A E++ + VN L+ Q NLE+ V+DR GLI+E
Sbjct: 53 AATYFGKGKIEEL-TQVAAAR---EVETLVVNDELTPSQLSNLEKETQLRVIDRTGLILE 108
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A +KEA+LQ ELA L Y+ RL T + + + G+ G GF
Sbjct: 109 IFANRARSKEARLQVELAKLQYQLPRL-------------RTSATQRLDQQTAGNTGGGF 155
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ GAGET+L+L RR I R +H+ +++E+ + VQR R D + + +VA+VG
Sbjct: 156 TNRGAGETKLELNRRTIRNRINHINQELKEMSTSANVQRQRR------DKKDIPSVALVG 209
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
YTN GKST ++ L D +F LFATLD ++ + P K ++LSDTVGF+S
Sbjct: 210 YTNTGKSTTMNGLISMYGRNEDKQVFEKDMLFATLDTSVRKLTFPDQKELILSDTVGFVS 269
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
+LP QLV AF +TL E +ADLLV V+D + P+ E T LQ++GV++ MI
Sbjct: 270 NLPHQLVKAFRSTLSEAAKADLLVQVVDVSDPHYREMMQTTADTLQEIGVTDVP---MIY 326
Query: 417 VWNKID 422
+NK D
Sbjct: 327 AFNKAD 332
>gi|383762918|ref|YP_005441900.1| GTP-binding protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381383186|dbj|BAM00003.1| GTP-binding protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 475
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 177/303 (58%), Gaps = 30/303 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGK--PVLDRVGLI 183
T G G +E ++ + EL A + + LS QQR LE+A G+ V+DR LI
Sbjct: 89 TLIGVGKLEELRAAV------AELGANMVIFDEELSPRQQRELEKALGEEIKVIDRTALI 142
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF HA T+E +Q ELA Y+ RL R T A R G+ G
Sbjct: 143 LDIFARHARTREGAVQVELAQYEYRLPRLTR----------AWTHLARQAGGRAGGATGG 192
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
+ G GET+L++ RR I R + L ++ E+R+ R R+ RR+ L +A+V
Sbjct: 193 VGVRGPGETQLEVDRREINRRIAFLKQELAEIRKHREQYRSQRRQSA------LPLIALV 246
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQL 362
GYTNAGKSTL++A++D+D+ ++ +LFATLDP + V LPS + VL SDTVGFI LPL L
Sbjct: 247 GYTNAGKSTLLNAIADADVVAEDQLFATLDPTTRRVRLPSDRLVLFSDTVGFIQKLPLTL 306
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TLEEV EADLLVHV+D + PN+EE V ++L+ +G ++ K ++ NKID
Sbjct: 307 VAAFRSTLEEVNEADLLVHVVDISHPNMEEQIAAVEEILEDLGAAD---KPIVMALNKID 363
Query: 423 YHD 425
D
Sbjct: 364 RLD 366
>gi|149377523|ref|ZP_01895264.1| GTPase [Marinobacter algicola DG893]
gi|149358215|gb|EDM46696.1| GTPase [Marinobacter algicola DG893]
Length = 432
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 172/298 (57%), Gaps = 32/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I+ A + E D + N LS Q+RN+ER VLDR G+I++IF
Sbjct: 57 FVGEGKLEEIR----DAVTANEADVVLFNHALSPSQERNIERELSCRVLDRTGVILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLEHMSTRLIR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER + ++E+VR+ R R AR R + TV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRERIKSIHRRLEKVRKQRNQGRRARMRAD------IPTVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + ++ S +++ +LFATLDP L+ + LP G V+++DTVGFI LP +LV+AF
Sbjct: 209 GKSTLFNRITTSTVYAADQLFATLDPTLRRLELPDIGPVVMADTVGFIRHLPHKLVEAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
ATLEE EA +L+H++DC +E+ V +VL ++G E +++V+NKID D
Sbjct: 269 ATLEETTEASILLHIIDCHDHRRDENMEQVEEVLAEIGADE---IPVLQVFNKIDLLD 323
>gi|417787540|ref|ZP_12435223.1| GTP-binding protein-like HflX [Lactobacillus salivarius NIAS840]
gi|334307717|gb|EGL98703.1| GTP-binding protein-like HflX [Lactobacillus salivarius NIAS840]
Length = 419
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 171/306 (55%), Gaps = 35/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G E I+ H+ ++D + VNA L+ Q RNLE G V+DR LI+E
Sbjct: 47 AATYFGKGKAEEIR-HVGEI---NDIDTLIVNAELTPTQLRNLEDITGLQVIDRTALILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ ++A L Y+ RL T + + G+ G G+
Sbjct: 103 IFASRAQTKEAKLQVQIAKLQYQLPRL-------------RTSSINRMDQQTAGNTGGGY 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L+L +R I +R S+L +++E+ QR AR R + TVA+VG
Sbjct: 150 TNRGSGETKLELNKRVIEKRISNLSKELKEIESVHENQRRARERS------SIKTVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
YTNAGKST ++ L ++ ++F LFATLD ++ + LP K LSDTVGF+S
Sbjct: 204 YTNAGKSTTMNGLLKLLEQPTNKEVFEKDMLFATLDTSIRKIKLPDNKEFFLSDTVGFVS 263
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
DLP QLV AF TL E +ADLL+ V+D + + ++ T Q L ++GV + MI
Sbjct: 264 DLPHQLVKAFRTTLSEANQADLLIQVIDGSDEHAKDMIETTKQTLDEIGVKDIP---MIY 320
Query: 417 VWNKID 422
+NK D
Sbjct: 321 AYNKSD 326
>gi|298713744|emb|CBJ33718.1| PHflX, plastid HflX GTPase [Ectocarpus siliculosus]
Length = 823
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 190/345 (55%), Gaps = 43/345 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLE-----RAWGKPVLDRVGL 182
T+ G G V+ IK +N G IF + + G QQR+LE A G VLDR L
Sbjct: 400 TYIGTGKVKEIKSAMN---QLGVCTVIFDDELSPG-QQRSLEVEFGGEAAGIKVLDRTAL 455
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF HA T+E +LQ +LA MY+ RL ++ T E R GG
Sbjct: 456 ILDIFAQHAKTREGQLQVDLALHMYRLPRLTKM------WTHLE-----------RQQGG 498
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G + G GE +L++ RR + ++ L ++ VRR R QR R++ G L VA+
Sbjct: 499 VG-LRGPGERQLEVDRRLLKDKIIALKKELSGVRRHRDFQRRGRKKLG------LPVVAL 551
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKV----LLSDTVGFISDL 358
VGYTNAGKSTL++ L+ + + ++ LFATLDP + V L KV +L+DTVGFI L
Sbjct: 552 VGYTNAGKSTLLNTLTRAGVMAENMLFATLDPTTRKVKLSGLKVHPEVMLTDTVGFIQKL 611
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P LV AF ATLEEVVEAD++VH++D ++P+ E+ + V VL ++ S+ K + +W
Sbjct: 612 PTNLVAAFRATLEEVVEADVIVHIVDVSSPSREKQESAVTGVLGEMKTSD---KPRLTMW 668
Query: 419 NKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD--VECID 461
NK+D EE + +D ++ + A T E +D V C++
Sbjct: 669 NKLDLLPEEEQEQVRVDAEERDELTVAASA-MTGEGLDDFVTCLE 712
>gi|227544339|ref|ZP_03974388.1| GTP-binding protein HflX [Lactobacillus reuteri CF48-3A]
gi|338203148|ref|YP_004649293.1| GTP-binding protein HflX [Lactobacillus reuteri SD2112]
gi|227185681|gb|EEI65752.1| GTP-binding protein HflX [Lactobacillus reuteri CF48-3A]
gi|336448388|gb|AEI57003.1| GTP-binding protein HflX [Lactobacillus reuteri SD2112]
Length = 425
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 196/387 (50%), Gaps = 51/387 (13%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE I+ + I N LS Q RNLE G +LDR LI+EIF
Sbjct: 56 TYFGKGKVEEIR----DVADANHVPTIITNDELSPSQLRNLEEGTGCRILDRTALILEIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ ++A L Y+ RL +T +E + + GG GF +
Sbjct: 112 ATRAQTKEAKLQVQIAELQYRLPRL-------------QTSASERLDQQT--GGGSGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I + SHL ++ + ++ +R R + + T A+VGYT
Sbjct: 157 RGAGETKLEMDRRTIQHQISHLRQELAAIAKSEQTKRKQRVK------SAIPTAALVGYT 210
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
NAGKST+++ L + +F LFATLD ++ + LP K LLSDTVGF+S L
Sbjct: 211 NAGKSTIMNGLVRKYGAAEEKTVFEKNMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKL 270
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P LV++F +TL E ADLL+ V+D + P+ +E T + L+Q+G+++ MI V+
Sbjct: 271 PTHLVESFKSTLAEAANADLLIQVIDYSDPHYKEMMETTNETLKQIGINDIP---MINVF 327
Query: 419 NKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN-------N 471
NK D + E +E GDD S +D S + V+ I + D
Sbjct: 328 NKADKTEIEFPILE---GDDQVVISAKQD---ASLDLLVDVIKKHLFKDYVTTTLLIPFT 381
Query: 472 DGFVSEDLGESMNKNHNDY-SDGWLLS 497
DG V L E N Y SDG LL+
Sbjct: 382 DGHVVSYLNEHTNILDTTYESDGTLLT 408
>gi|399030314|ref|ZP_10730820.1| GTP-binding protein HflX [Flavobacterium sp. CF136]
gi|398071820|gb|EJL63067.1| GTP-binding protein HflX [Flavobacterium sp. CF136]
Length = 409
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 181/341 (53%), Gaps = 33/341 (9%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
+ N EE+ + Y D F V++ S K + TF G G ++ I ++
Sbjct: 16 GIVTQNQSEEKLNEYLDELEFLTFTAGGEVIKRFSQKMERPNPKTFVGTGKIDEINLYV- 74
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
+ ++ + + L+ QQ+N+ + +LDR LI++IF A T A+ Q ELA
Sbjct: 75 ---KENDISTLIFDDELTPSQQKNISKIIDCKILDRTNLILDIFAQRAETSYARTQVELA 131
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL G T E R GG G + G GETE++ RR + +
Sbjct: 132 QCQYLLPRL------SGLWTHLE-----------RQKGGIG-MRGPGETEIETDRRIVRD 173
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R S L +I+ + + VQR+ R + VA+VGYTN GKSTL++A+ SD+F
Sbjct: 174 RISLLKDKIKTIDKQMGVQRSNRG--------AMVRVALVGYTNVGKSTLMNAIGKSDVF 225
Query: 324 SDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVL 383
+ +LFATLD ++ VV+ + LLSDTVGFI LP QLVD+F +TL+EV EADLL+H++
Sbjct: 226 VENKLFATLDTTVRKVVIKNLPFLLSDTVGFIRKLPTQLVDSFKSTLDEVREADLLLHIV 285
Query: 384 DCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
D + P E+H +V Q LQ + E K +I V+NKID +
Sbjct: 286 DISHPEFEDHIESVNQTLQDIKAHE---KPVIMVFNKIDAY 323
>gi|409397114|ref|ZP_11248052.1| GTP-binding protein HflX [Pseudomonas sp. Chol1]
gi|409118274|gb|EKM94674.1| GTP-binding protein HflX [Pseudomonas sp. Chol1]
Length = 433
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 176/301 (58%), Gaps = 32/301 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE ++ ++ +GE++ + N L+ Q+RNLER VLDR GLI++
Sbjct: 55 AKFLIGTGKVEELRDLVH----EGEVELVIFNHTLTPSQERNLERVLECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKQRLEKVRGQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+++D+++ +LFATLDP L+ + LP G V+L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNTLTEADVYAANQLFATLDPTLRRLELPDIGPVVLADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+F ATLEE ADLL+HV+D P ++ VL VL ++G E ++EV+NK+D
Sbjct: 267 SFRATLEESSNADLLLHVIDAHEPERDQQIEQVLAVLAEIGADE---LPVLEVYNKVDLM 323
Query: 425 D 425
+
Sbjct: 324 E 324
>gi|440733051|ref|ZP_20912828.1| GTP-binding protein [Xanthomonas translucens DAR61454]
gi|440364853|gb|ELQ01974.1| GTP-binding protein [Xanthomonas translucens DAR61454]
Length = 441
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/324 (39%), Positives = 179/324 (55%), Gaps = 32/324 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T G G +E +K AE+ G D I VN LS Q+RNLE+ + V+DR GL
Sbjct: 51 KPSPSTLIGSGKLEEVKAV---AEASGA-DLILVNHALSPGQERNLEKYLERRVIDRTGL 106
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L + +RL+R G + RG GS G
Sbjct: 107 ILDIFAQRARSHEGKLQVELAQLRHMATRLIR-------------GWTHLERQRG-GSIG 152
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GET+L+ RR + +R L ++E+V R AR R L +AV
Sbjct: 153 ---LRGPGETQLETDRRLLQKRVEQLQKRLEKVEVQHTQMRRARVRSE------LPRIAV 203
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTNAGKSTL +AL+ ++ ++ +LFATLDP ++ + LP G +L+DTVGF+ +LP +L
Sbjct: 204 VGYTNAGKSTLFNALTGAEAYAADKLFATLDPTVRRIALPGGNAMLADTVGFVRNLPHEL 263
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF +TL E EAD L+HV+D P EE V +VL VG + L ++ V+NKID
Sbjct: 264 VAAFRSTLSEAREADFLLHVVDAADPLREERIAQVDEVLHAVGAGD--LPQLL-VFNKID 320
Query: 423 YHDEEMGDVEYIDGDDISNFSRAE 446
E DV + D + + +R E
Sbjct: 321 RI--EGADVRHDAQDGVPDEARRE 342
>gi|345881004|ref|ZP_08832532.1| GTP-binding protein HflX [Prevotella oulorum F0390]
gi|343920721|gb|EGV31449.1| GTP-binding protein HflX [Prevotella oulorum F0390]
Length = 415
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 184/335 (54%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE- 150
E + Y D F + V V+ + K A T+ G G +E IK +I E E
Sbjct: 26 EAKTKEYLDELEFLADTAGAVTVKRFTQKVNGPSAVTYVGKGKLEEIKAYIEQCEDNEEP 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL+R + L
Sbjct: 146 RLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRITLLKQ 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
+++E+ + + QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 197 RLQEIDKQKTTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLLVHV+D + P+
Sbjct: 249 TLDTTVRKVVVDNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
EE V L+++G S++ +MI ++NKID YH
Sbjct: 309 EEQIRVVDNTLKELGCSDK--PSMI-IFNKIDNYH 340
>gi|120437448|ref|YP_863134.1| HflX-like GTP-binding protein [Gramella forsetii KT0803]
gi|117579598|emb|CAL68067.1| HflX-like GTP-binding protein [Gramella forsetii KT0803]
Length = 407
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 191/348 (54%), Gaps = 38/348 (10%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EE+ + Y D F V++ S + K TF G G + +K ++ ++
Sbjct: 24 EEKLEEYLDELEFLTYTAGGEVIKRFSQRLDKPDPKTFIGSGKMNDVKEF----AAENDI 79
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
A+ + LS QQ+N+E+ +LDR GLI++IF A T A+ Q ELA Y R
Sbjct: 80 GAVIFDDELSPAQQKNIEKLLKCKILDRTGLILDIFAQRAKTSYARTQVELAQYEYLLPR 139
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L G T E R GG G + G GETE++ RR + ++ S L ++
Sbjct: 140 LA------GMWTHLE-----------RQRGGIG-MRGPGETEIETDRRIVRDKISLLKNK 181
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
++ + + VQR R + L VA+VGYTN GKSTL++ +S SD+F++ +LFAT
Sbjct: 182 LKVIDKQMEVQRGNRGQ--------LVRVALVGYTNVGKSTLMNVISKSDVFAENKLFAT 233
Query: 332 LDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLE 391
LD ++ VV+ + LLSDTVGFI LP QLV++F +TL+EV EADLL+HV+D + PN E
Sbjct: 234 LDTTVRKVVIRNLPFLLSDTVGFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHPNFE 293
Query: 392 EHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDI 439
+H +V ++L ++ + K I V+NKID + + E ID DD+
Sbjct: 294 DHIDSVNKILTEIETLD---KPTIMVFNKIDSY-----EAEKIDEDDL 333
>gi|270158385|ref|ZP_06187042.1| GTP-binding protein HflX [Legionella longbeachae D-4968]
gi|289163370|ref|YP_003453508.1| GTPase [Legionella longbeachae NSW150]
gi|269990410|gb|EEZ96664.1| GTP-binding protein HflX [Legionella longbeachae D-4968]
gi|288856543|emb|CBJ10338.1| putative GTPase [Legionella longbeachae NSW150]
Length = 419
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 179/309 (57%), Gaps = 32/309 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A + G G E I + ++ + + VN LS Q+RNLER V+DR GLI++
Sbjct: 54 AKYYIGQGKAEEIAQLVKTCDA----ELVLVNHELSPSQERNLERLLECRVVDRSGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + +R ++ ++E+VR +R R ARR+ L TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRDRIKYINKRLEKVRSSRDQNRQARRKAS------LRTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL+ ++ +LFATLDP ++ + LP S V+++DTVGFI DLP LV+
Sbjct: 206 TNAGKSTLFNALTGESIYVANQLFATLDPTMRQLNLPGSSSVIVTDTVGFIRDLPHHLVE 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATLEE +ADLL+HV+D + P+ ++ +V QVL ++ V + +I+V+NKID
Sbjct: 266 AFRATLEETQQADLLLHVIDISDPHWRDNVFSVQQVLDELEVHDVP---IIQVFNKIDLK 322
Query: 425 DEEMGDVEY 433
+ ++Y
Sbjct: 323 EGWEPKIDY 331
>gi|427441526|ref|ZP_18925325.1| GTP-binding protein HflX [Pediococcus lolii NGRI 0510Q]
gi|425787048|dbj|GAC46113.1| GTP-binding protein HflX [Pediococcus lolii NGRI 0510Q]
Length = 430
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 171/306 (55%), Gaps = 35/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G +E + + A E++ + VN L+ Q NLE+ V+DR GLI+E
Sbjct: 53 AATYFGKGKIEEL-TQVAAAR---EVETLVVNDELTPSQLSNLEKETQLRVIDRTGLILE 108
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A +KEA+LQ ELA L Y+ RL T + + + G+ G GF
Sbjct: 109 IFANRARSKEARLQVELAKLQYQLPRL-------------RTSATQRLDQQTAGNTGGGF 155
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ GAGET+L+L RR I R +H+ +++E+ + VQR R D + + +VA+VG
Sbjct: 156 TNRGAGETKLELNRRTIRNRINHINQELKEMSTSANVQRQRR------DKKDIPSVALVG 209
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
YTN GKST ++ L D +F LFATLD ++ + P K ++LSDTVGF+S
Sbjct: 210 YTNTGKSTTMNGLISMYGRNEDKQVFEKDMLFATLDTSVRKLTFPDQKELILSDTVGFVS 269
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
+LP QLV AF +TL E +ADLLV V+D + P+ E T LQ++GV++ MI
Sbjct: 270 NLPHQLVKAFRSTLSEAAKADLLVQVVDVSDPHYREMMQTTADTLQEIGVTDVP---MIY 326
Query: 417 VWNKID 422
+NK D
Sbjct: 327 AFNKAD 332
>gi|46447400|ref|YP_008765.1| hypothetical protein pc1766 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401041|emb|CAF24490.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 444
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 174/299 (58%), Gaps = 27/299 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+ G +E + I A +D I + ++ QQRNL+ A+ KPV+DR LI+
Sbjct: 70 ASTYVSKGKLEEL---IQIANELA-VDLIIFDDEITPAQQRNLQAAFNKPVIDRTELILG 125
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
+F AHTKEA+LQ ELA + Y+ RL R+ R GG +
Sbjct: 126 VFAQRAHTKEARLQIELAKIKYEAPRLKRLWTHLSR-----------QQGTSGSGGGGAY 174
Query: 246 ISGAGETELQLQRRRILERRSHLLS-QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GE ++++ +R IL+R+ +L +I++V+ R QR +R R + A++G
Sbjct: 175 LKGEGEKQIEIDKR-ILKRKMDVLQKEIDDVKAVRETQRLSRVR------SAIPVFAIIG 227
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLV 363
YTNAGKSTL++AL+D+ +F + +LFATLD + LP+ + +L+ DTVGFI LP LV
Sbjct: 228 YTNAGKSTLLNALTDAGVFVEDKLFATLDTTTRKFTLPNNQDILIVDTVGFIRKLPHLLV 287
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF +TLEE +EAD+L+H++D + P EE T +VLQ++G + K +I V NKID
Sbjct: 288 AAFKSTLEEAIEADILLHLIDVSHPMAEEQAATTYEVLQELGAGK---KPIITVLNKID 343
>gi|393781711|ref|ZP_10369905.1| GTP-binding protein HflX [Bacteroides salyersiae CL02T12C01]
gi|392676315|gb|EIY69753.1| GTP-binding protein HflX [Bacteroides salyersiae CL02T12C01]
Length = 420
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 184/334 (55%), Gaps = 20/334 (5%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKKFTQKLPTANSVTYVGKGKLEEIKEYILNEEENERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ + S G G GG + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL--------WTHLERQGGGSGSGSGKGGSVGLRGPGETQLEMDRRIILNRMSLLKE 197
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 198 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTMMNLLAKSEVFAENKLFA 249
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+HV+D + P
Sbjct: 250 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPGF 309
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G + K MI ++NKID +
Sbjct: 310 EEQIEVVNKTLADIGGAG---KPMILIFNKIDAY 340
>gi|417809707|ref|ZP_12456388.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
gi|335350631|gb|EGM52127.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
Length = 419
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 171/306 (55%), Gaps = 35/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G E I+ H+ + +D + VNA L+ Q RNLE G V+DR LI+E
Sbjct: 47 AATYFGKGKAEEIR-HVGEINN---IDTLIVNAELTPTQLRNLEDITGLQVIDRTALILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ ++A L Y+ RL T + + G+ G G+
Sbjct: 103 IFASRAQTKEAKLQVQIAKLQYQLPRL-------------RTSSINRMDQQTAGNTGGGY 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L+L +R I +R S+L +++E+ QR AR R + TVA+VG
Sbjct: 150 TNRGSGETKLELNKRVIEKRISNLSKELKEIENVHENQRRARERS------SIKTVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
YTNAGKST ++ L ++ ++F LFATLD ++ + LP K LSDTVGF+S
Sbjct: 204 YTNAGKSTTMNGLLKLLEQPTNKEVFEKDMLFATLDTSIRKIKLPDNKEFFLSDTVGFVS 263
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
DLP QLV AF TL E +ADLL+ V+D + + ++ T Q L ++GV + MI
Sbjct: 264 DLPHQLVKAFRTTLSEANQADLLIQVIDGSDEHAKDMIETTKQTLDEIGVKDIP---MIY 320
Query: 417 VWNKID 422
+NK D
Sbjct: 321 AYNKSD 326
>gi|221212776|ref|ZP_03585752.1| GTP-binding protein HflX [Burkholderia multivorans CGD1]
gi|221166989|gb|EED99459.1| GTP-binding protein HflX [Burkholderia multivorans CGD1]
Length = 396
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 182/333 (54%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++D + N L+ QQRNLERA + V+DR LI++
Sbjct: 52 AAMFIGSGKADELRL----ACEAHDVDIVIFNHALAPAQQRNLERALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++++RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L +G++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQIVVSDTVGFIRELPHQLV 263
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGADTIR---QVLVFNKIDA 320
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|418960950|ref|ZP_13512837.1| GTP-binding protein [Lactobacillus salivarius SMXD51]
gi|380344617|gb|EIA32963.1| GTP-binding protein [Lactobacillus salivarius SMXD51]
Length = 419
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 171/306 (55%), Gaps = 35/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G E I+ H+ + +D + VNA L+ Q RNLE G V+DR LI+E
Sbjct: 47 AATYFGKGKAEEIR-HVGEINN---IDTLIVNAELTPTQLRNLEDITGLQVIDRTALILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ ++A L Y+ RL T + + G+ G G+
Sbjct: 103 IFASRAQTKEAKLQVQIAKLQYQLPRL-------------RTSSINRMDQQTAGNTGGGY 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L+L +R I +R S+L +++E+ QR AR R + TVA+VG
Sbjct: 150 TNRGSGETKLELNKRVIEKRISNLSKELKEIENVHENQRRARERS------SIKTVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
YTNAGKST ++ L ++ ++F LFATLD ++ + LP K LSDTVGF+S
Sbjct: 204 YTNAGKSTTMNGLLKLLEQPTNKEVFEKDMLFATLDTSIRKIKLPDNKEFFLSDTVGFVS 263
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
DLP QLV AF TL E +ADLL+ V+D + + ++ T Q L ++GV + MI
Sbjct: 264 DLPHQLVKAFRTTLSEANQADLLIQVIDGSDEHAKDMIETTKQTLDEIGVKDIP---MIY 320
Query: 417 VWNKID 422
+NK D
Sbjct: 321 AYNKSD 326
>gi|262406799|ref|ZP_06083348.1| GTP-binding protein HflX [Bacteroides sp. 2_1_22]
gi|294646410|ref|ZP_06724054.1| GTP-binding protein HflX [Bacteroides ovatus SD CC 2a]
gi|294806576|ref|ZP_06765414.1| GTP-binding protein HflX [Bacteroides xylanisolvens SD CC 1b]
gi|298484334|ref|ZP_07002496.1| GTP-binding protein HflX [Bacteroides sp. D22]
gi|336402846|ref|ZP_08583572.1| GTP-binding protein HflX [Bacteroides sp. 1_1_30]
gi|345508797|ref|ZP_08788420.1| GTP-binding protein HflX [Bacteroides sp. D1]
gi|423215611|ref|ZP_17202138.1| GTP-binding protein HflX [Bacteroides xylanisolvens CL03T12C04]
gi|229447205|gb|EEO52996.1| GTP-binding protein HflX [Bacteroides sp. D1]
gi|262355502|gb|EEZ04593.1| GTP-binding protein HflX [Bacteroides sp. 2_1_22]
gi|292638248|gb|EFF56622.1| GTP-binding protein HflX [Bacteroides ovatus SD CC 2a]
gi|294446220|gb|EFG14849.1| GTP-binding protein HflX [Bacteroides xylanisolvens SD CC 1b]
gi|295084680|emb|CBK66203.1| GTP-binding protein HflX [Bacteroides xylanisolvens XB1A]
gi|298269524|gb|EFI11123.1| GTP-binding protein HflX [Bacteroides sp. D22]
gi|335947610|gb|EGN09396.1| GTP-binding protein HflX [Bacteroides sp. 1_1_30]
gi|392691806|gb|EIY85047.1| GTP-binding protein HflX [Bacteroides xylanisolvens CL03T12C04]
Length = 419
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 183/334 (54%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E I+ +I N E + E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTAHSVTYVGKGKLEEIRQYIRNEEEEERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTMMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LV++F +TL+EV EADLLVHV+D + P
Sbjct: 249 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVESFKSTLDEVREADLLVHVVDISHPGF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L ++G S K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLAEIGGSG---KPMILVFNKIDAY 339
>gi|339497356|ref|ZP_08658332.1| GTP-binding protein HflX [Leuconostoc pseudomesenteroides KCTC
3652]
Length = 426
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 175/311 (56%), Gaps = 46/311 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE I+ A + ++D I N L+ Q RNLE+A V+DR GLI++IF
Sbjct: 53 TYFGKGKVE----EISAAVTTYDVDMIVANDELTPSQIRNLEKATNATVVDRTGLILDIF 108
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TK A+LQ +LA L Y+ RL R + T + + G+GG GF S
Sbjct: 109 AQRAQTKVAQLQVQLARLQYQLPRL--------RTSMSITLDQQT------GAGGGGFTS 154
Query: 248 -GAGETELQLQRRRILERRSHL---LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
GAGET+L+ RRRI + H+ L+ +E+ TR+ QR L VA+V
Sbjct: 155 RGAGETKLEQSRRRITAQMVHIRQELADLEKGETTRSAQR---------QNNDLPNVALV 205
Query: 304 GYTNAGKSTLVSAL--------SDSD---LFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
GYTNAGKSTL++ L S+ D +F LFATL+ ++ + LP K LLSDT
Sbjct: 206 GYTNAGKSTLMNRLLARFGIGASNDDSKQVFEKDMLFATLNTTVRQLTLPDKKQFLLSDT 265
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+S LP LV AF +TL+E ADLL+HV+D + P+ ++ TT + LQ++GVS
Sbjct: 266 VGFVSKLPHSLVAAFKSTLQEAASADLLLHVVDVSDPHYQDMMTTTNKTLQEIGVSG--- 322
Query: 412 KNMIEVWNKID 422
+ I V+NK D
Sbjct: 323 RPTITVYNKAD 333
>gi|421893711|ref|ZP_16324205.1| GTP-binding protein HflX [Pediococcus pentosaceus IE-3]
gi|385273533|emb|CCG89577.1| GTP-binding protein HflX [Pediococcus pentosaceus IE-3]
Length = 406
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 184/339 (54%), Gaps = 42/339 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + A T+FG G VE + I A E+D I +N LS Q NLE+
Sbjct: 21 VVDQVTQKLERPNAATYFGKGKVEDL-VQIATAL---EVDTIVLNDELSPSQLTNLEKET 76
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+DR GLI+EIF AH++EAKLQ ELA L Y+ RL T +
Sbjct: 77 NLHFIDRTGLILEIFANRAHSREAKLQVELAKLQYQLPRL-------------RTSSTQR 123
Query: 233 VSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+ + G+ G GF + G+GET+L+L RR I + +H+ +++E+ + +QR R
Sbjct: 124 LDQQTAGNTGGGFTNRGSGETKLELNRRTIRNKINHINKELKEMTTSSDIQRKQR----- 178
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSG 344
D + + +VA+VGYTN GKST ++ L D +F LFATLD ++ + P
Sbjct: 179 -DKKDIPSVALVGYTNTGKSTTMNGLVRMYGRNEDKQVFEKDMLFATLDTSVRKLTFPDQ 237
Query: 345 K-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 403
K ++LSDTVGF+S LP QLV AF +TL E +ADLLV ++D + P+ E T L +
Sbjct: 238 KELVLSDTVGFVSHLPHQLVKAFRSTLAEAAKADLLVQIVDISDPHYREMMQTTEDTLNE 297
Query: 404 VGVSEEKLKNMIEVWNKIDYHDEEMGDVEY--IDGDDIS 440
+GV++ MI +NK D + V Y +DG++++
Sbjct: 298 IGVTDIP---MIYAFNKAD-----LAGVSYPTLDGNELT 328
>gi|262373437|ref|ZP_06066715.1| GTP-binding protein HflX [Acinetobacter junii SH205]
gi|262311190|gb|EEY92276.1| GTP-binding protein HflX [Acinetobacter junii SH205]
Length = 449
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 183/313 (58%), Gaps = 36/313 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ S++ K F G G V+ I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHISVQRNKPDPKFFIGSGKVDEI------AELVQELEAELVIFDHSLSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G TG
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GFTGNL 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GE++L+ RR I R + L ++ +V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGESQLETDRRLIRVRITQLKDKLVKVQQTRLQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLS 349
+ T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + G V+L+
Sbjct: 197 ----AAIPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLA 252
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGF+ +L LV++F ATLEE +EA LL+HV+D +PN++E V VL+++G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSNSPNMDEQIEAVESVLKEIGAD-- 310
Query: 410 KLKNMIEVWNKID 422
++ V+NKID
Sbjct: 311 --APILHVYNKID 321
>gi|445421547|ref|ZP_21435949.1| GTP-binding protein HflX [Acinetobacter sp. WC-743]
gi|444757515|gb|ELW82037.1| GTP-binding protein HflX [Acinetobacter sp. WC-743]
Length = 443
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 172/300 (57%), Gaps = 34/300 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I + E++ + + LS Q+RNLER V+DR GLI++IF
Sbjct: 58 FIGTGKAEEIAEQVEN----DEIELVIFDQALSPAQERNLERILKCRVIDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + SRLVR R S GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLDHLSSRLVRSR-----------------SNLDSQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET L+ RR + R L ++E+VR+TR RAAR++ + TV++VGYTNA
Sbjct: 156 PGETLLETDRRLLRIRMEQLKDRLEKVRKTRVQGRAARQKAN------IPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L++SD+++ +LFATLDP L+ + G ++L+DTVGF+ +L LV++F
Sbjct: 210 GKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTLVLADTVGFVRNLAHSLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY-HDE 426
ATLEE +EA LL+HV+D ++P++ E V VL+++G L+ V+NKID HDE
Sbjct: 270 ATLEETLEATLLLHVIDASSPDMMEQIDAVETVLKEIGADIPTLR----VYNKIDQSHDE 325
>gi|419955623|ref|ZP_14471748.1| GTP-binding protein HflX [Pseudomonas stutzeri TS44]
gi|387967536|gb|EIK51836.1| GTP-binding protein HflX [Pseudomonas stutzeri TS44]
Length = 433
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 177/301 (58%), Gaps = 32/301 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE ++ ++ +GE++ + N L+ Q+RNLER VLDR GLI++
Sbjct: 55 AKFLIGTGKVEELRDLVH----EGEVELVIFNHTLTPSQERNLERVLECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKQRLEKVRGQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL+++++++ +LFATLDP L+ + LP G V+L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTEAEVYAANQLFATLDPTLRRLELPDVGPVILADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+F ATLEE ADLL+HV+D P ++ VL VL ++G E ++E++NK+D
Sbjct: 267 SFRATLEESSNADLLLHVIDAHEPERDQQIEQVLAVLAEIGADE---LPVLEIYNKVDLM 323
Query: 425 D 425
+
Sbjct: 324 E 324
>gi|344202793|ref|YP_004787936.1| GTP-binding proten HflX [Muricauda ruestringensis DSM 13258]
gi|343954715|gb|AEM70514.1| GTP-binding proten HflX [Muricauda ruestringensis DSM 13258]
Length = 403
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 175/312 (56%), Gaps = 38/312 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E ++ + + E+ ++ + LS QQ N+E+ VLDR LI++IF
Sbjct: 60 TYIGSGKMEEVRQFV----KENEIGSVIFDDELSPAQQNNVEKLLRCKVLDRTSLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAKTSYARTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ ++ R QR R GS L VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLAKIDRQMETQRGNR----GS----LVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S SD+F++ +LFATLD ++ VVL + LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNVISKSDVFAENKLFATLDTTVRKVVLGNLPFLLSDTVGFIRKLPTQLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ S K I V+NKID + E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEEHIASVNQILDEIDSSG---KPCIMVFNKIDQYRPE 326
Query: 428 MGDVEYIDGDDI 439
ID DD+
Sbjct: 327 T-----IDEDDL 333
>gi|336172305|ref|YP_004579443.1| GTP-binding proten HflX [Lacinutrix sp. 5H-3-7-4]
gi|334726877|gb|AEH01015.1| GTP-binding proten HflX [Lacinutrix sp. 5H-3-7-4]
Length = 409
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 182/324 (56%), Gaps = 34/324 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ +I E+ AIF + LS Q+RN+ + VLDR LI++IF
Sbjct: 60 TFIGTGKMEDVRQYI---EANNISTAIFDDE-LSAAQERNISKILNCKVLDRTNLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSAARTQVELAQFEYLLPRL------KGMWTHLE-----------RQKGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++I+ + + +VQR R + + VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKAKIKTIDKQMSVQRGNRGK--------MVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S +F++ +LFATLD ++ VV+ + LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNTISKSKVFAENKLFATLDTTVRKVVIQNLPFLLSDTVGFIRKLPTQLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YHDE 426
+TL+EV EADLL+HV+D + PN E+H +V ++L ++ S K I V+NKID Y +
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEDHIASVNKILGEIDSSN---KPTIMVFNKIDAYQAK 326
Query: 427 EMGDVEYIDGDDISNFSRAEDKDT 450
+ + I ++S AE K T
Sbjct: 327 PYDETDLIAERTEEHYSLAEWKRT 350
>gi|255101348|ref|ZP_05330325.1| putative GTP-binding protein [Clostridium difficile QCD-63q42]
gi|255307224|ref|ZP_05351395.1| putative GTP-binding protein [Clostridium difficile ATCC 43255]
Length = 423
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 175/311 (56%), Gaps = 39/311 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE I +N + + IF N LS Q +NLE ++DR LI++IF
Sbjct: 53 YIGTGKVEEI---LNLIKKENIEIVIFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 108
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RL+ G + L GR SGG G +
Sbjct: 109 QRAKTREAKLQVEVASLKYMLPRLI---GSNENL--------------GRQSGGVGTKNR 151
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++++++ R QR+ RR+ L VA+VGYTN
Sbjct: 152 GSGEKKLELDRRRIEEKITSLNRELDDLKFQRETQRSMRRKSN------LPNVALVGYTN 205
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKS++++ L D +F LFATL+ ++++VL + K LLSDTVGF+S+LP
Sbjct: 206 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLANNKEFLLSDTVGFVSNLP 265
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 266 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLKQIGADGIP---MIHVYN 322
Query: 420 KIDYHDEEMGD 430
KID D E+ D
Sbjct: 323 KIDLIDVEVLD 333
>gi|114799526|ref|YP_760704.1| putative GTP-binding protein HflX [Hyphomonas neptunium ATCC 15444]
gi|114739700|gb|ABI77825.1| putative GTP-binding protein HflX [Hyphomonas neptunium ATCC 15444]
Length = 442
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 168/269 (62%), Gaps = 25/269 (9%)
Query: 156 VNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRV 215
++A L+ +QQRNLE+ G V+DR GLI+EIF A TKE +LQ ELA L+Y++SRLVR
Sbjct: 86 IDASLTPVQQRNLEKRLGVKVIDRTGLILEIFGLRARTKEGRLQVELARLLYERSRLVRT 145
Query: 216 RGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEV 275
T E R GG GF+SG GE++L+ RR + ++ L +++V
Sbjct: 146 ------WTHLE-----------RQRGGGGFLSGPGESQLEADRRMLDDKIVRLRRDLDDV 188
Query: 276 RRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPR 335
+RTR VQR RRR G VA+VGYTN+GKSTL + L+ SD+F+ FATLDP
Sbjct: 189 KRTREVQRQGRRRSGKP------VVALVGYTNSGKSTLFNRLTGSDVFAKDMPFATLDPT 242
Query: 336 LKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLD-CTAPNLEEH 393
++ + LP+ G+ L DTVGFI+DLP L+D+F ATLEE ++ADLL+HV D +A ++E+
Sbjct: 243 IRRLDLPTLGEAALIDTVGFITDLPTHLIDSFQATLEESLQADLLIHVRDRASASDMEQA 302
Query: 394 RTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
L + + S L MIE WNK+D
Sbjct: 303 EDVALVLERLEKESGLPLPPMIEAWNKMD 331
>gi|34541492|ref|NP_905971.1| GTP-binding protein HflX [Porphyromonas gingivalis W83]
gi|188995677|ref|YP_001929929.1| GTP-binding protein [Porphyromonas gingivalis ATCC 33277]
gi|419970389|ref|ZP_14485886.1| GTP-binding protein HflX [Porphyromonas gingivalis W50]
gi|34397809|gb|AAQ66870.1| GTP-binding protein HflX [Porphyromonas gingivalis W83]
gi|188595357|dbj|BAG34332.1| GTP-binding protein [Porphyromonas gingivalis ATCC 33277]
gi|392610969|gb|EIW93726.1| GTP-binding protein HflX [Porphyromonas gingivalis W50]
Length = 406
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 169/295 (57%), Gaps = 32/295 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ I+ ++ + E+ + + LS Q RN+E+ +LDR GLI++IF
Sbjct: 62 TFVGKGKLDEIRAYVQ----ENEIGMVVFDDELSPKQLRNIEKELQTKILDRTGLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL G T E R GG G +
Sbjct: 118 ARRAQTAHAKTQVELAQYQYMLPRLT------GLWTHLE-----------RQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+ RR +L++ + L ++ ++ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGEKQLETDRRIVLDKIARLKEELRDIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ LS S++F++ +LFATLD ++ V++ + LLSDTVGFI LP QLV++F
Sbjct: 212 VGKSTLMNVLSKSEVFAENKLFATLDTTVRKVIIDNLPFLLSDTVGFIRKLPTQLVESFK 271
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV EADLLVHV+D + P EE V Q L ++ EE K M+ ++NKID
Sbjct: 272 STLDEVREADLLVHVVDMSHPAFEEQIEVVNQTLAEITAGEE--KPMLLLFNKID 324
>gi|126699826|ref|YP_001088723.1| GTP-binding protein, HflX type [Clostridium difficile 630]
gi|115251263|emb|CAJ69094.1| putative GTP-binding protein, HflX type [Clostridium difficile 630]
Length = 425
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 175/311 (56%), Gaps = 39/311 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE I +N + + IF N LS Q +NLE ++DR LI++IF
Sbjct: 55 YIGTGKVEEI---LNLIKKENIEIVIFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RL+ G + L GR SGG G +
Sbjct: 111 QRAKTREAKLQVEVASLKYMLPRLI---GSNENL--------------GRQSGGVGTKNR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++++++ R QR+ RR+ L VA+VGYTN
Sbjct: 154 GSGEKKLELDRRRIEEKITSLNRELDDLKFQRETQRSMRRKSN------LPNVALVGYTN 207
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKS++++ L D +F LFATL+ ++++VL + K LLSDTVGF+S+LP
Sbjct: 208 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLANNKEFLLSDTVGFVSNLP 267
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 268 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLKQIGADGIP---MIHVYN 324
Query: 420 KIDYHDEEMGD 430
KID D E+ D
Sbjct: 325 KIDLIDVEVLD 335
>gi|296450368|ref|ZP_06892125.1| GTP-binding protein HflX [Clostridium difficile NAP08]
gi|296878780|ref|ZP_06902781.1| GTP-binding protein HflX [Clostridium difficile NAP07]
gi|296260778|gb|EFH07616.1| GTP-binding protein HflX [Clostridium difficile NAP08]
gi|296430208|gb|EFH16054.1| GTP-binding protein HflX [Clostridium difficile NAP07]
Length = 425
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 188/341 (55%), Gaps = 41/341 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE + +N + + +F N LS Q +NLE ++DR LI++IF
Sbjct: 55 YIGTGKVEEL---LNLIKKESIEVVVFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RLV G + L GR SGG G +
Sbjct: 111 QRAKTREAKLQVEVASLKYMLPRLV---GSNENL--------------GRQSGGVGTKNR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++++++ R QR+ RR+ L VA+VGYTN
Sbjct: 154 GSGEKKLELDRRRIEEKITFLNRELDDLKFQRETQRSMRRKSN------LPNVALVGYTN 207
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKS++++ L D +F LFATL+ +++++L + K LLSDTVGF+S+LP
Sbjct: 208 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIILANNKEFLLSDTVGFVSNLP 267
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 268 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKNHIKVTEDTLKQIGADGIP---MIHVYN 324
Query: 420 KIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECI 460
KID D E+ D E +D D + KD + + ++CI
Sbjct: 325 KIDLIDVEVLD-EILDSIDKEGLFVSVKKDINIDKM-IKCI 363
>gi|392956058|ref|ZP_10321588.1| GTP-binding proten HflX [Bacillus macauensis ZFHKF-1]
gi|391878300|gb|EIT86890.1| GTP-binding proten HflX [Bacillus macauensis ZFHKF-1]
Length = 410
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 167/298 (56%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A TF G G +E IK + + E D I N L+ Q RNL R + V+DR LI++
Sbjct: 58 ASTFIGKGKIEEIKA----LQEELEADIIVFNDELTPAQNRNLSRFFDVLVIDRTQLILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A ++E KLQ ELA L Y RL +G +S G G G RG
Sbjct: 114 IFATRAQSREGKLQVELAQLQYLLPRL--------------SGMGVSLSRLGAGIGTRG- 158
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GET+L+ RR I R + + Q++++ R R R+ + VA+VGY
Sbjct: 159 ---PGETKLEKDRRHIRSRITEIKHQLQDIVHHRDRYRERRKENQS------IQVALVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+++D + + LFATLDP + + LPSG +VL+SDTVGFI DLP L+
Sbjct: 210 TNAGKSTLFNGLTEADSYEENLLFATLDPLTRKMKLPSGFQVLVSDTVGFIQDLPTSLIA 269
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF +TLEE EADLL+HV+D +A + E+H TV +L+++ S M+ ++NK D
Sbjct: 270 AFRSTLEEAKEADLLLHVVDGSALDREQHEQTVHSILKELKASH---LPMVTLYNKRD 324
>gi|91794552|ref|YP_564203.1| GTP-binding protein, HSR1-related [Shewanella denitrificans OS217]
gi|91716554|gb|ABE56480.1| GTP-binding protein, HSR1-related [Shewanella denitrificans OS217]
Length = 435
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 176/305 (57%), Gaps = 31/305 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E + + E+K + N LS Q+RNLER VLDR LI++IF
Sbjct: 57 FVGTGKAEELAAMVAATEAK----VVIFNHALSPAQERNLERVCHCRVLDRTTLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLRHMSTRLIR----------GWTHLE-------RQKGGIG-MRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R ++ ++++V + R R +R+R SD LATV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRGRIKNINRRLDKVDKQREQSRRSRKR---SD---LATVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHA 368
GKSTL + L+ SD+++ +LFATLDP L+ + LP G V+L+DTVGFI LP LV AF A
Sbjct: 209 GKSTLFNGLTSSDVYAADQLFATLDPTLRKLDLPDGAVILADTVGFIRHLPHDLVAAFKA 268
Query: 369 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEM 428
TL+E +A+LL+H++DC N++++ V VL+++ E + ++ V NKID ++
Sbjct: 269 TLQETRQAELLLHIVDCADDNMQDNFDQVQDVLKEIDADE--IPQLV-VCNKIDLLEDFA 325
Query: 429 GDVEY 433
++Y
Sbjct: 326 PRIDY 330
>gi|170694785|ref|ZP_02885936.1| GTP-binding proten HflX [Burkholderia graminis C4D1M]
gi|170140416|gb|EDT08593.1| GTP-binding proten HflX [Burkholderia graminis C4D1M]
Length = 404
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 182/335 (54%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLE+A + V+DR LI
Sbjct: 61 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLEQALNRRVIDRTSLI 114
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 115 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S++E++RR QR R R+ +V++V
Sbjct: 158 G-LRGPGETQLETDRRLIGERIKALKSRLEKLRRQHGTQRRQRSRNQT------MSVSLV 210
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +G+V++SDTVGFI +LP Q
Sbjct: 211 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 270
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 271 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 327
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E E ++ D+ N SR T + +D
Sbjct: 328 DAVPELAARGEAVERDEYGNISRVFLSARTGQGLD 362
>gi|452824147|gb|EME31152.1| GTP-binding protein HflX [Galdieria sulphuraria]
Length = 453
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 129/317 (40%), Positives = 178/317 (56%), Gaps = 46/317 (14%)
Query: 128 TFFGPGTVETIK----CHINGAESKGELDAIFVNAILSGIQQRNLERAWGK-----PVLD 178
TF G G V I+ C+ E + + + LS QQ+NLER K VLD
Sbjct: 30 TFVGSGKVSEIRSLLVCY--------ECNTVVFDCELSPSQQKNLERKLAKDKQVVNVLD 81
Query: 179 RVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR 238
R LI++IF HA T+E KLQ ELA Y+ RL R+ T E R
Sbjct: 82 RTALILDIFAQHAKTREGKLQVELALNQYRLPRLTRL------WTHLE---------RQS 126
Query: 239 GSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA 298
G+GG G + G GET+++ RR + R S L ++E+VR RA QR RR+ +
Sbjct: 127 GAGGVG-LRGPGETQIESDRRLLSSRISQLKGELEDVRSHRARQRKKRRQFE------VP 179
Query: 299 TVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKV----LLSDTVGF 354
V++VGYTNAGKSTL++AL+++ + LFATLDP + LP V L++DTVGF
Sbjct: 180 VVSLVGYTNAGKSTLLNALTNAGVLVQDSLFATLDPTTRRCRLPGLHVHPDILMTDTVGF 239
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
I LP LV AF ATLEE+ AD+L+HV+D ++P+ E + V++VL+++G +E K+M
Sbjct: 240 IQKLPTTLVAAFRATLEEIAAADILLHVVDISSPSSESQQKAVMEVLREIGAAE---KSM 296
Query: 415 IEVWNKIDYHDEEMGDV 431
I VWNKID G +
Sbjct: 297 ITVWNKIDRFQGNTGSI 313
>gi|403050999|ref|ZP_10905483.1| GTP-binding protein [Acinetobacter bereziniae LMG 1003]
Length = 443
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 172/300 (57%), Gaps = 34/300 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I + E++ + + LS Q+RNLER V+DR GLI++IF
Sbjct: 58 FIGTGKAEEIAEQVEN----DEIELVIFDQALSPAQERNLERILKCRVIDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + SRLVR R S GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLDHLSSRLVRSR-----------------SNLDSQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET L+ RR + R L ++E+VR+TR RAAR++ + TV++VGYTNA
Sbjct: 156 PGETLLETDRRLLRIRMEQLKDRLEKVRKTRVQGRAARQKAN------IPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L++SD+++ +LFATLDP L+ + G ++L+DTVGF+ +L LV++F
Sbjct: 210 GKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTLVLADTVGFVRNLAHSLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY-HDE 426
ATLEE +EA LL+HV+D ++P++ E V VL+++G L+ V+NKID HDE
Sbjct: 270 ATLEETLEATLLLHVIDASSPDMMEQIDAVETVLKEIGADIPTLR----VYNKIDQSHDE 325
>gi|291231737|ref|XP_002735823.1| PREDICTED: pseudoautosomal GTP-binding protein-like protein-like
[Saccoglossus kowalevskii]
Length = 535
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 175/296 (59%), Gaps = 29/296 (9%)
Query: 130 FGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
FG G + N +S + A+F++ +L+G+Q + LE AWG V DR +++ IF
Sbjct: 162 FGKGNFAMLT---NLIKSMSSVTAVFMSVEMLTGLQHKLLEEAWGVHVYDRYTIVLNIFK 218
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA TKEAKLQ LA + Y +SRL RG +VS + SG + +I G
Sbjct: 219 EHAVTKEAKLQIALAEIPYLRSRL---RG--------------MVSNMDQQSGAQQYIGG 261
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET L++QRR + ER + ++ ++++ R + R R++ + T++VVGYTN+
Sbjct: 262 GGETLLEVQRRMLDEREMKIKKRLSKLKKRRELLRTIRKK------KQFPTISVVGYTNS 315
Query: 309 GKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAF 366
GK+TL+ +L+ D DL +LFATLD L + V+ DTVGFIS LP L+DAF
Sbjct: 316 GKTTLIKSLTGDLDLCPQDKLFATLDITSHVGQLTNRMNVIYVDTVGFISALPHNLIDAF 375
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLE+V+ +DL++H+ D + P+ + VL+VLQ++GV +E NMIEV NKID
Sbjct: 376 SATLEDVMLSDLIIHIRDVSHPDTVAQKDNVLRVLQEMGVPDELTNNMIEVCNKID 431
>gi|116492198|ref|YP_803933.1| GTPase [Pediococcus pentosaceus ATCC 25745]
gi|116102348|gb|ABJ67491.1| GTPase [Pediococcus pentosaceus ATCC 25745]
Length = 420
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 184/339 (54%), Gaps = 42/339 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + A T+FG G VE + I A E+D I +N LS Q NLE+
Sbjct: 35 VVDQVTQKLERPNAATYFGKGKVEDL-VQIATAL---EVDTIVLNDELSPSQLTNLEKET 90
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+DR GLI+EIF AH++EAKLQ ELA L Y+ RL T +
Sbjct: 91 NLHFIDRTGLILEIFANRAHSREAKLQVELAKLQYQLPRL-------------RTSSTQR 137
Query: 233 VSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+ + G+ G GF + G+GET+L+L RR I + +H+ +++E+ + +QR R
Sbjct: 138 LDQQTAGNTGGGFTNRGSGETKLELNRRTIRNKINHINKELKEMTTSSDIQRKQR----- 192
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSG 344
D + + +VA+VGYTN GKST ++ L D +F LFATLD ++ + P
Sbjct: 193 -DKKDIPSVALVGYTNTGKSTTMNGLVRMYGRNEDKQVFEKDMLFATLDTSVRKLTFPDQ 251
Query: 345 K-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQ 403
K ++LSDTVGF+S LP QLV AF +TL E +ADLLV ++D + P+ E T L +
Sbjct: 252 KELVLSDTVGFVSHLPHQLVKAFRSTLAEAAKADLLVQIVDISDPHYREMMQTTEDTLNE 311
Query: 404 VGVSEEKLKNMIEVWNKIDYHDEEMGDVEY--IDGDDIS 440
+GV++ MI +NK D + V Y +DG++++
Sbjct: 312 IGVTDIP---MIYAFNKAD-----LAGVSYPTLDGNELT 342
>gi|408790193|ref|ZP_11201823.1| GTP-binding protein HflX [Lactobacillus florum 2F]
gi|408520533|gb|EKK20578.1| GTP-binding protein HflX [Lactobacillus florum 2F]
Length = 420
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 167/305 (54%), Gaps = 36/305 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G VE + + + I N LS Q RNLE+A V+DR GLI+E
Sbjct: 50 AATYFGKGKVEEVAQLVVTTNA----STIIANDELSPSQIRNLEKATNATVMDRTGLILE 105
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF AHT+EAKLQ ELA L Y+ RL TG ++ + + G G
Sbjct: 106 IFATRAHTREAKLQVELAKLKYQLPRL-------------RTGASQHLDQQSAGGGLAN- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GET+L+L RR I + +H+ +++E ++ A Q R+R S L TVA+VGY
Sbjct: 152 -RGTGETKLELNRRTIEHQINHVRHELKESEQSHATQ---RKRRAESH---LKTVALVGY 204
Query: 306 TNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISD 357
TNAGKST+++ L D +F LFATLD ++ + LP + LLSDTVGF+S
Sbjct: 205 TNAGKSTIMNQLVQRFGENEDKQVFVKNMLFATLDTSVRKLELPGHRSCLLSDTVGFVSK 264
Query: 358 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 417
LP QLV AF +TL E +ADLL+ V+D + PN T LQ++GV E MI V
Sbjct: 265 LPHQLVAAFQSTLSEAAQADLLLQVVDYSDPNQALMMETTNATLQEIGVPELP---MITV 321
Query: 418 WNKID 422
+NK D
Sbjct: 322 FNKAD 326
>gi|358448122|ref|ZP_09158627.1| GTP-binding protein, HSR1-related [Marinobacter manganoxydans
MnI7-9]
gi|385332239|ref|YP_005886190.1| small GTP-binding protein [Marinobacter adhaerens HP15]
gi|311695389|gb|ADP98262.1| small GTP-binding protein [Marinobacter adhaerens HP15]
gi|357227550|gb|EHJ06010.1| GTP-binding protein, HSR1-related [Marinobacter manganoxydans
MnI7-9]
Length = 432
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 173/295 (58%), Gaps = 32/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I+ A + E D + N LS Q+RN+E VLDR G+I++IF
Sbjct: 57 FVGEGKLEEIR----DAVAANEADVVLFNHALSPRQERNIEHELKCRVLDRTGVILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER + ++E+VRR R R AR+R +D + TV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRERIKSIHKRLEKVRRQRNQGRRARQR---AD---IPTVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + ++ S +++ +LFATLDP L+ + LP G V+++DTVGFI LP +LV+AF
Sbjct: 209 GKSTLFNRITTSSVYAADQLFATLDPTLRRLELPDVGPVVMADTVGFIRHLPHKLVEAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEE +A LL+H++D P EE+ V +VL ++G + M++V+NKID
Sbjct: 269 ATLEETTQATLLLHIIDSHDPRREENIEQVEEVLAEIGADD---IPMLQVFNKID 320
>gi|288802876|ref|ZP_06408313.1| GTP-binding protein HflX [Prevotella melaninogenica D18]
gi|288334693|gb|EFC73131.1| GTP-binding protein HflX [Prevotella melaninogenica D18]
Length = 416
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 186/335 (55%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE- 150
E++ Y D F + + V+ + + A T+ G G +E I+ +I E + E
Sbjct: 26 EDKTKEYLDELEFLADTAGAITVKRFTQRVTGPSAVTYVGKGKLEEIRDYIKMKEDEEEP 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E+ G +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQMRNIEQELGVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL+R + L
Sbjct: 146 RLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMTLLKQ 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + + QR R R + VA+VGYTN GKST ++ L+ S++F++ +LFA
Sbjct: 197 RLAEIDKQKVTQRKNRGR--------MIRVALVGYTNVGKSTTMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+
Sbjct: 249 TLDTTVRKVVVDNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
EE V Q L ++G +++ +MI ++NKID YH
Sbjct: 309 EEQIQVVNQTLSELGCADK--PSMI-IFNKIDNYH 340
>gi|373953852|ref|ZP_09613812.1| GTP-binding proten HflX [Mucilaginibacter paludis DSM 18603]
gi|373890452|gb|EHQ26349.1| GTP-binding proten HflX [Mucilaginibacter paludis DSM 18603]
Length = 394
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 182/336 (54%), Gaps = 33/336 (9%)
Query: 89 NSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESK 148
N EQ Y D F E V+ + K + TF G G +E IK +++ E
Sbjct: 24 NETAEQGKEYLDELEFLVETAGGKTVKTFTQKMLRPERSTFVGTGKLEEIKAYVDAEE-- 81
Query: 149 GELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYK 208
+D + + LS Q RN+E +LDR LI++IF A A T +A+ Q ELA L Y
Sbjct: 82 --IDIVVFDDGLSPSQLRNIENELQVKILDRNNLILDIFAARAQTSQARTQVELAQLQYL 139
Query: 209 KSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHL 268
RL R+ + R GG G + G GE++++ RR IL + S L
Sbjct: 140 LPRLTRLW-----------------THLERQKGGIG-MRGPGESQIETDRRIILNKISLL 181
Query: 269 LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARL 328
+++ + R QR R + L VA+VGYTN GKST+++ +S S++F++ +L
Sbjct: 182 KERLKLIDRQNETQRKNRGQ--------LIRVALVGYTNVGKSTIMNMISKSEVFAENKL 233
Query: 329 FATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 388
FATLD ++ VV+ + LLSDTVGFI LP LV+ F +TL+EV EAD+L+HV+D + P
Sbjct: 234 FATLDTTVRKVVIDNLPFLLSDTVGFIRKLPHHLVECFKSTLDEVREADILLHVVDVSHP 293
Query: 389 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
N E+ TV + L+++G + K +I V+NKID +
Sbjct: 294 NFEDQIKTVNETLKELGAID---KPVITVFNKIDAY 326
>gi|430376931|ref|ZP_19431064.1| GTP - binding protein, phage lambda cII repressor [Moraxella
macacae 0408225]
gi|429540068|gb|ELA08097.1| GTP - binding protein, phage lambda cII repressor [Moraxella
macacae 0408225]
Length = 449
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 207/400 (51%), Gaps = 63/400 (15%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
+ K A F G G + I + E+ D + N L+ Q+RNLER VLDR
Sbjct: 50 RRSKPDAKYFVGTGKADEIAQLVTLHEA----DIVIFNHSLTPSQERNLERLLKCRVLDR 105
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
GLI++IF A T E KLQ ELA L + +RLVR G T R
Sbjct: 106 TGLILDIFAQRARTYEGKLQVELAQLNHLATRLVR----------GWTHLE-------RQ 148
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG G + G GET+L+ RR + R + L +++++V++TRA RA R++ SD + T
Sbjct: 149 KGGIG-LRGPGETQLETDRRLLQVRVNQLNTKLDKVKQTRAQGRAKRQK---SD---IPT 201
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDL 358
+++VGYTNAGKSTL + L++ +++ +LFATLDP L+ V G V+L DTVGF+ L
Sbjct: 202 ISLVGYTNAGKSTLFNHLTNETVYAADKLFATLDPTLRHVNWKGLGSVILVDTVGFVRHL 261
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN---MI 415
P +LV+AFHATLEE +EADLL+HV+D + ++ E V VL Q+ KN ++
Sbjct: 262 PHELVEAFHATLEETLEADLLLHVIDSSREDMHEQIDAVKSVLSQI-------KNNVPVL 314
Query: 416 EVWNKID---------YHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGD 466
V+NKID Y D + YI + + DK TT+ +
Sbjct: 315 NVFNKIDLTCKPAHIGYSDNHQPNRVYISAQN----ALGIDKLTTA-------VQQLIAG 363
Query: 467 DADNNDGFVSEDL---GESMNKNHNDYSDGWLLSGDEQDN 503
D N ++ L G+ +N H D W L+ DEQ N
Sbjct: 364 DLQNYQLTIAPTLPNSGQLLNHLH-DLGVIWQLNYDEQGN 402
>gi|395802754|ref|ZP_10482006.1| GTP-binding protein HflX [Flavobacterium sp. F52]
gi|395435195|gb|EJG01137.1| GTP-binding protein HflX [Flavobacterium sp. F52]
Length = 410
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 183/341 (53%), Gaps = 33/341 (9%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
+ N EE+ + Y D F V++ S K + TF G G ++ I +
Sbjct: 16 GIVTQNQSEEKLNEYLDELEFLTFTAGGEVIKRFSQKMERPNPKTFVGTGKIDDINLFV- 74
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
+ ++ + + L+ QQ+N+ R +LDR LI++IF A T A+ Q ELA
Sbjct: 75 ---KENKISTVIFDDELTPSQQKNISRIIDCKILDRTNLILDIFAQRAETSYARTQVELA 131
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL G T E R GG G + G GETE++ RR + +
Sbjct: 132 QCQYLLPRL------SGLWTHLE-----------RQKGGIG-MRGPGETEIETDRRIVRD 173
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R S L +I+ + + ++QR+ R + VA+VGYTN GKSTL++A+ SD+F
Sbjct: 174 RISLLKDKIKTIDKQMSIQRSNRG--------AMVRVALVGYTNVGKSTLMNAIGKSDVF 225
Query: 324 SDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVL 383
+ +LFATLD ++ VV+ + LLSDTVGFI LP QLVD+F +TL+EV EADLL+HV+
Sbjct: 226 VENKLFATLDTTVRKVVIKNLPFLLSDTVGFIRKLPTQLVDSFKSTLDEVREADLLLHVV 285
Query: 384 DCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
D + P+ E+H +V + LQ++ ++ K I V+NKID +
Sbjct: 286 DISHPDFEDHIESVNKTLQEIKSND---KPTIMVFNKIDAY 323
>gi|423083883|ref|ZP_17072411.1| GTP-binding protein HflX [Clostridium difficile 002-P50-2011]
gi|423087419|ref|ZP_17075807.1| GTP-binding protein HflX [Clostridium difficile 050-P50-2011]
gi|357543681|gb|EHJ25696.1| GTP-binding protein HflX [Clostridium difficile 002-P50-2011]
gi|357544837|gb|EHJ26824.1| GTP-binding protein HflX [Clostridium difficile 050-P50-2011]
Length = 425
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 188/341 (55%), Gaps = 41/341 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE + +N + + IF N LS Q +NLE ++DR LI++IF
Sbjct: 55 YIGTGKVEEL---LNLIKKENIEIVIFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RL+ G + L GR SGG G +
Sbjct: 111 QRAKTREAKLQVEVASLKYMLPRLI---GSNENL--------------GRQSGGVGTKNR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++++++ R QR+ RR+ L VA+VGYTN
Sbjct: 154 GSGEKKLELDRRRIEEKITSLNKELDDLKFQRETQRSMRRKSN------LPNVALVGYTN 207
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKS++++ L D +F LFATL+ ++++VL + K LLSDTVGF+S+LP
Sbjct: 208 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLTNNKEFLLSDTVGFVSNLP 267
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 268 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLKQIGADGIP---MIHVYN 324
Query: 420 KIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECI 460
KID D E+ D + +D D + KD + + ++CI
Sbjct: 325 KIDLIDVEVLD-KILDSIDKEGLFVSVKKDINIDKM-IKCI 363
>gi|255656198|ref|ZP_05401607.1| putative GTP-binding protein [Clostridium difficile QCD-23m63]
Length = 423
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 188/341 (55%), Gaps = 41/341 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE + +N + + +F N LS Q +NLE ++DR LI++IF
Sbjct: 53 YIGTGKVEEL---LNLIKKESIEVVVFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 108
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RLV G + L GR SGG G +
Sbjct: 109 QRAKTREAKLQVEVASLKYMLPRLV---GSNENL--------------GRQSGGVGTKNR 151
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++++++ R QR+ RR+ L VA+VGYTN
Sbjct: 152 GSGEKKLELDRRRIEEKITFLNRELDDLKFQRETQRSMRRKSN------LPNVALVGYTN 205
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKS++++ L D +F LFATL+ +++++L + K LLSDTVGF+S+LP
Sbjct: 206 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIILANNKEFLLSDTVGFVSNLP 265
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 266 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKNHIKVTEDTLKQIGADGIP---MIHVYN 322
Query: 420 KIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECI 460
KID D E+ D E +D D + KD + + ++CI
Sbjct: 323 KIDLIDVEVLD-EILDSIDKEGLFVSVKKDINIDKM-IKCI 361
>gi|385800483|ref|YP_005836887.1| GTP-binding proten HflX [Halanaerobium praevalens DSM 2228]
gi|309389847|gb|ADO77727.1| GTP-binding proten HflX [Halanaerobium praevalens DSM 2228]
Length = 409
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 180/295 (61%), Gaps = 35/295 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G V+ IK N AE+ +F N LS +QQRNLE V+DR +I++IF
Sbjct: 51 YIGSGKVKEIK---NAAETLQANLIVFDNE-LSPVQQRNLEDQIEIKVIDRSQVILDIFA 106
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HAH++E+K+Q ELA L Y RL R++G ++ R +GG G G
Sbjct: 107 LHAHSRESKIQVELAQLEY---RLPRLQGRGIEMS--------------RLAGGIG-TRG 148
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L++ RRRI E+ L ++E++ +R VQR+ R+ VA+VGYTNA
Sbjct: 149 PGESQLEVDRRRIEEKIHRLKESLKEIKASRKVQRSNRKD---------PMVAIVGYTNA 199
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ L+ ++ ++ +LFATLD ++ LP G+ +++SDTVGFIS LP QL+ +F
Sbjct: 200 GKSTLINNLAAANSYTADKLFATLDSTMRKFELPVGQNIIISDTVGFISKLPHQLIASFR 259
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
TLEE+ ADL++H++D + ++E++ V Q ++++ S+ K +I+V+NKID
Sbjct: 260 TTLEEIENADLILHLIDASNSDIEKNIKIVNQEIRKLKKSKAK---VIKVFNKID 311
>gi|303257596|ref|ZP_07343608.1| GTP-binding protein HflX [Burkholderiales bacterium 1_1_47]
gi|302859566|gb|EFL82645.1| GTP-binding protein HflX [Burkholderiales bacterium 1_1_47]
Length = 373
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 171/300 (57%), Gaps = 35/300 (11%)
Query: 128 TFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
TF G G +E IK NGA+ A+ + LS QQRN+E+A G VLDR LI+E
Sbjct: 46 TFLGSGKIEEIKSEALANGAK------ALIFDVALSPAQQRNIEKAVGIEVLDRTNLILE 99
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T+E +LQ ELA L + +RLVR G + RG G
Sbjct: 100 IFRQRAKTREGRLQVELARLTHLSTRLVR-------------GWTHLERQRG----GLSK 142
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GE +++L RR I R L Q++++ R R QR +R+R + TVA+VGY
Sbjct: 143 TGGPGEKQIELDRRMIATRVKALREQLKKLERQRNTQRKSRQRGE------VLTVALVGY 196
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ +++ +LFATLD + + +V+LSDTVGFI LP QL++
Sbjct: 197 TNAGKSTLFNRLTRGGVYAADQLFATLDTTARRCFVGGDVEVVLSDTVGFIRGLPHQLIE 256
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF +TL+E +ADLL+HV+D + P EE T V +VL+++G + + ++ V+NKID
Sbjct: 257 AFKSTLDEAAQADLLLHVVDSSTPAREEQMTEVNKVLEEIGAKD--IPQLL-VFNKIDLE 313
>gi|312144164|ref|YP_003995610.1| GTP-binding proten HflX [Halanaerobium hydrogeniformans]
gi|311904815|gb|ADQ15256.1| GTP-binding proten HflX [Halanaerobium hydrogeniformans]
Length = 410
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/313 (38%), Positives = 187/313 (59%), Gaps = 36/313 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G V IK N AES +++ I + LS +QQRNLE G V+DR +I++IF
Sbjct: 51 YVGKGKVNEIK---NTAES-TDINLIVFDNELSPVQQRNLEDYIGIKVIDRSQVILDIFA 106
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HAH+KE+K+Q ELA L Y RL R+RG ++ R +GG G G
Sbjct: 107 RHAHSKESKIQVELAQLEY---RLPRLRGRGIEMS--------------RLAGGIG-TRG 148
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L++ RRRI ++ L ++++++ +R VQR+ R+ A+VGYTNA
Sbjct: 149 PGESKLEVDRRRIEKKIHRLKEKLKDIKSSRDVQRSQRKD---------PLAALVGYTNA 199
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKST+++ LS ++ +LFATLD ++ + LP G+ ++LSDTVGFIS LP QL +F
Sbjct: 200 GKSTIMNLLSGANSHVADQLFATLDSTMRQLELPVGRTIILSDTVGFISKLPHQLFASFR 259
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE- 426
TLEE+ AD+++HV+D + P +E++ V + L+ + S+ K I+++NKID +
Sbjct: 260 TTLEEIENADIILHVIDSSDPKMEKNIKVVEEELENLNSSKSK---RIKIFNKIDLLKQS 316
Query: 427 EMGDVEYIDGDDI 439
E+ D++ I D I
Sbjct: 317 EINDLKLIYPDAI 329
>gi|329895357|ref|ZP_08270982.1| GTP-binding protein HflX [gamma proteobacterium IMCC3088]
gi|328922370|gb|EGG29714.1| GTP-binding protein HflX [gamma proteobacterium IMCC3088]
Length = 428
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 182/303 (60%), Gaps = 32/303 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A TF G G +E I+ + + E + + N L+ Q+RNLER VLDR GLI++
Sbjct: 55 AGTFVGSGKLEEIR----QIKERHEAEIVMFNHALTPSQERNLERVLQCRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLQHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R +L+++++V+R R R +R+R + TV++VGY
Sbjct: 153 LRGPGETQLETDRRLLRARIKSILARLDKVQRQRDQGRRSRKRAE------IPTVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+D+D+++ +LFATLDP L+ + L + G+V+L+DTVGFI+ LP +LVD
Sbjct: 207 TNAGKSTLFNHLTDADVYAADQLFATLDPTLRQLELDAIGQVILADTVGFIAHLPHKLVD 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF+ATLEE + A+LL V+D + +++ VL VL ++G +K+ + V+NK+D
Sbjct: 267 AFNATLEETLNAELLCIVVDAASDQRDDNLHQVLDVLAEIGA--DKIPRLY-VYNKLDLL 323
Query: 425 DEE 427
++E
Sbjct: 324 EQE 326
>gi|359428076|ref|ZP_09219118.1| GTP-binding protein HflX [Acinetobacter sp. NBRC 100985]
gi|358236527|dbj|GAB00657.1| GTP-binding protein HflX [Acinetobacter sp. NBRC 100985]
Length = 446
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 124/313 (39%), Positives = 183/313 (58%), Gaps = 36/313 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++Q+ S++ K F G G V+ I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILQHISVQRNKPDPKFFIGSGKVDEI------AELVQELEAELVIFDHSLSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G TG
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GFTGNL 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GE++L+ RR I R + L ++ +V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGESQLETDRRLIRVRITQLKEKLIKVQQTRLQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLS 349
+ T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + G V+L+
Sbjct: 197 ----AAIPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLDWDGIGTVVLA 252
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++PN+ E V VL+++G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVVDSSSPNMLEQIEAVESVLKEIGAD-- 310
Query: 410 KLKNMIEVWNKID 422
++ V+NKID
Sbjct: 311 --APILHVYNKID 321
>gi|187924512|ref|YP_001896154.1| GTP-binding proten HflX [Burkholderia phytofirmans PsJN]
gi|187715706|gb|ACD16930.1| GTP-binding proten HflX [Burkholderia phytofirmans PsJN]
Length = 404
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 183/335 (54%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLE+A + V+DR LI
Sbjct: 61 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLEQALNRRVIDRTSLI 114
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 115 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L +++E++RR QR AR R+ +V++V
Sbjct: 158 G-LRGPGETQLETDRRLIGERIKALKTRLEKLRRQHGTQRRARSRNQT------MSVSLV 210
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +G+V++SDTVGFI +LP Q
Sbjct: 211 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 270
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 271 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 327
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E + ++ D+ N SR T + +D
Sbjct: 328 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLD 362
>gi|365925380|ref|ZP_09448143.1| GTP-binding protein [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420265927|ref|ZP_14768441.1| GTP-binding protein [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394426881|gb|EJE99666.1| GTP-binding protein [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 417
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 140/343 (40%), Positives = 194/343 (56%), Gaps = 49/343 (14%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFV--NAILSGIQQRNLERAWGKPVLDRV 180
K + T+ G G V I AE DA F+ N LS Q RNLE+ G VLDR
Sbjct: 44 KPVSATYLGKGKVSEI------AEIARATDAQFIILNDELSPTQIRNLEKDTGIAVLDRT 97
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
LI+EIF+ A +KEA++Q E+A L YK RL RV PD +L + SA G +
Sbjct: 98 ELILEIFSNRARSKEAQIQVEIARLKYKMPRL-RV-APDIKL--------DQQSASGALA 147
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GAGET+L+L RR + R S L +++E+ + ++ +RR+ L +V
Sbjct: 148 N-----RGAGETKLELNRRTLQNRISFLSRELKEIDKEFEIKSKSRRKSN------LPSV 196
Query: 301 AVVGYTNAGKST----LVSALSDSD---LFSDARLFATLDPRLKSVVLP-SGKVLLSDTV 352
A+VGYTNAGKST L+S S+ + +F LFATLD ++++ P + K LLSDTV
Sbjct: 197 ALVGYTNAGKSTTMNGLLSLFSEEETKQVFEKDMLFATLDTSVRNLSFPDNKKFLLSDTV 256
Query: 353 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 412
GFIS LP LV+AF +TL EV EADLL+ V+D + P+ +E T Q L+++GVS +K
Sbjct: 257 GFISKLPHNLVEAFKSTLAEVREADLLIQVIDISDPHSKEMIATTNQTLEELGVSNKK-- 314
Query: 413 NMIEVWNKIDYHDEEMGDVEY--IDGDDISNFSRAEDKDTTSE 453
MI +NK D +VEY I+G +I+ A+DK + E
Sbjct: 315 -MIYAYNKAD-----KAEVEYPTIEGMNIT--YSAQDKASLEE 349
>gi|255693723|ref|ZP_05417398.1| GTP-binding protein HflX [Bacteroides finegoldii DSM 17565]
gi|423302812|ref|ZP_17280834.1| GTP-binding protein HflX [Bacteroides finegoldii CL09T03C10]
gi|260620474|gb|EEX43345.1| GTP-binding protein HflX [Bacteroides finegoldii DSM 17565]
gi|408470688|gb|EKJ89222.1| GTP-binding protein HflX [Bacteroides finegoldii CL09T03C10]
Length = 418
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 182/334 (54%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E I+ +I N E + E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIRTYIRNEEEEERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ ++ + +A QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLADIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTIMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 249 TLDTTVRKVIIENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPGF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L ++G K MI V+NKID +
Sbjct: 309 EEQIEVVNKTLAEIGGGG---KPMILVFNKIDAY 339
>gi|311744959|ref|ZP_07718744.1| GTP-binding protein HflX [Algoriphagus sp. PR1]
gi|126577466|gb|EAZ81686.1| GTP-binding protein HflX [Algoriphagus sp. PR1]
Length = 422
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 184/338 (54%), Gaps = 42/338 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK +I E +D + + LS Q RNLE + DR LI++IF
Sbjct: 69 TFIGSGKLDEIKAYIEHFE----VDMVIFDDDLSPSQMRNLENEMKVKIYDRSLLILDIF 124
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T +AK Q ELA Y RL R+ R RG G+ RG
Sbjct: 125 LNRAQTAQAKTQVELARFQYLLPRLTRMWTHLER-------------QRG-GTSTRG--- 167
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGE E++ +R I + + L ++ E+ + QR R+ G+ VA+VGYTN
Sbjct: 168 GAGEKEIETDKRDIRNKITLLKQKLREIEKQGVTQRKGRK--------GIVRVALVGYTN 219
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ ++ +D+ ++ +LFAT+D ++ VVL LLSDTVGFI LP L++AF
Sbjct: 220 VGKSTLMNLVTKTDILAENKLFATVDSTVRKVVLERVPFLLSDTVGFIRKLPTHLIEAFK 279
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE- 426
+TL+E+ EADLLVHV+D + PN E+H + V Q L+++ + K ++ V+NKID ++
Sbjct: 280 STLDEIREADLLVHVVDISHPNFEDHISVVNQTLREINAGD---KPILLVFNKIDLVEQM 336
Query: 427 -------EMGDVEYIDGD--DISNFSRAEDKDTTSEPV 455
M ++E + + D ++ S A +K T +PV
Sbjct: 337 PSEEAIMNMTELELEESNYLDFASLSDAYEKKTEIKPV 374
>gi|167587057|ref|ZP_02379445.1| GTP-binding proten HflX [Burkholderia ubonensis Bu]
Length = 387
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 184/335 (54%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N ++D + N L+ QQRNLERA + V+DR LI
Sbjct: 47 AAMFVGSGKAEELRLACEAN------DVDIVIFNHALAPAQQRNLERALNRRVVDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I +R L S+++ +RR + QR R R G +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGDRIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS--GKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEIGQIVVSDTVGFIRELPHQ 256
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKI 313
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E + ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|385840911|ref|YP_005864235.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|300215032|gb|ADJ79448.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
Length = 419
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 171/306 (55%), Gaps = 35/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G E I+ H+ ++D + VNA L+ Q RNLE G V+DR LI+E
Sbjct: 47 AATYFGKGKAEEIR-HVGEI---NDIDTLIVNAELTPTQLRNLEDITGLQVIDRTALILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ ++A L Y+ RL T + + G+ G G+
Sbjct: 103 IFASRAQTKEAKLQVQIAKLQYQLPRL-------------RTSSINRMDQQTAGNTGGGY 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L+L +R I +R S+L +++E+ QR AR R + TVA+VG
Sbjct: 150 TNRGSGETKLELNKRVIEKRISNLSKELKEIESVHENQRRARERS------SIKTVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
YTNAGKST ++ L ++ ++F LFATLD ++ + LP K LSDTVGF+S
Sbjct: 204 YTNAGKSTTMNGLLKLLEQPTNKEVFEKDMLFATLDTSIRKIKLPDNKEFFLSDTVGFVS 263
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
+LP QLV AF TL E +ADLL+ V+D + + ++ T Q L ++GV + MI
Sbjct: 264 NLPHQLVKAFRTTLSEANQADLLIQVIDGSDEHAKDMIETTKQTLDEIGVKDIP---MIY 320
Query: 417 VWNKID 422
+NK D
Sbjct: 321 AYNKSD 326
>gi|392941156|ref|ZP_10306800.1| LOW QUALITY PROTEIN: GTP-binding protein HflX [Thermoanaerobacter
siderophilus SR4]
gi|392292906|gb|EIW01350.1| LOW QUALITY PROTEIN: GTP-binding protein HflX [Thermoanaerobacter
siderophilus SR4]
Length = 413
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 175/296 (59%), Gaps = 34/296 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K AE++ E+D + VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELKFF---AENQ-EVDLVIVNDELTGTQIKNMEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE LQ ELA L Y+ RL + G RL G G
Sbjct: 114 KRAKSKEGMLQVELAQLKYRLPRLAGLGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE+ R R++QR R+++ + +A+VGYTNA
Sbjct: 156 PGETKLETDRRHIKNRIKAIEKKLEEIERHRSLQRERRKKNR------IPVIAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++AL++++++ + +LFATLDP + +VL SG+ V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTNAEVYVEDKLFATLDPTARRLVLSSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG-VSEEKLKNMIEVWNKID 422
+TLEEV ADLL+HV+D T P++EE V +VL +G ++ K I V+NKID
Sbjct: 270 STLEEVKYADLLLHVIDVTLPDMEEKIKVVEKVLSDLGAINTPK----INVFNKID 321
>gi|91784201|ref|YP_559407.1| small GTP-binding protein [Burkholderia xenovorans LB400]
gi|385209024|ref|ZP_10035892.1| GTP-binding protein HflX [Burkholderia sp. Ch1-1]
gi|91688155|gb|ABE31355.1| GTP-binding protein HflX [Burkholderia xenovorans LB400]
gi|385181362|gb|EIF30638.1| GTP-binding protein HflX [Burkholderia sp. Ch1-1]
Length = 404
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 183/335 (54%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLE+A + V+DR LI
Sbjct: 61 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLEQALNRRVIDRTSLI 114
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 115 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L +++E++RR QR AR R+ +V++V
Sbjct: 158 G-LRGPGETQLETDRRLIGERIKALKTRLEKLRRQHGTQRRARSRNQT------MSVSLV 210
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +G+V++SDTVGFI +LP Q
Sbjct: 211 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 270
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 271 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 327
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E + ++ D+ N SR T + +D
Sbjct: 328 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLD 362
>gi|423346184|ref|ZP_17323872.1| GTP-binding protein HflX [Parabacteroides merdae CL03T12C32]
gi|409220982|gb|EKN13935.1| GTP-binding protein HflX [Parabacteroides merdae CL03T12C32]
Length = 403
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 168/295 (56%), Gaps = 33/295 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q RN+E+ +LDR LI++IF
Sbjct: 62 TFVGSGKLQEIKEYV----VENEIGLVIFDDELSAKQLRNIEKELQVKILDRTNLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 ARRAQTAHAKTQVELAQYKYMLPRLTRLW-----------------THLERQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ +R IL++ S L + E+ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGETQLETDKRIILDKISKLKRDLVEIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ LS S++F++ +LFATLD ++ V++ + LLSDTVGFI LP +LV++F
Sbjct: 212 VGKSTLMNLLSKSEVFAENKLFATLDTTVRKVIVDNLPFLLSDTVGFIRKLPTELVESFK 271
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV EADLLVHV+D + P EE V + L ++ +E K MI V+NKID
Sbjct: 272 STLDEVREADLLVHVVDISHPTFEEQIEVVNRTLSEIDKTE---KPMIMVFNKID 323
>gi|260683809|ref|YP_003215094.1| GTP-binding protein [Clostridium difficile CD196]
gi|260687469|ref|YP_003218603.1| GTP-binding protein [Clostridium difficile R20291]
gi|260209972|emb|CBA63976.1| putative GTP-binding protein [Clostridium difficile CD196]
gi|260213486|emb|CBE05186.1| putative GTP-binding protein [Clostridium difficile R20291]
Length = 425
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 174/311 (55%), Gaps = 39/311 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE I +N + + IF N LS Q +NLE ++DR LI++IF
Sbjct: 55 YIGTGKVEEI---LNLIKKENIEIVIFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RL+ G + L GR SGG G +
Sbjct: 111 QRAKTREAKLQVEVASLKYMLPRLI---GSNENL--------------GRQSGGVGTKNR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++ +++ R QR+ RR+ L VA+VGYTN
Sbjct: 154 GSGEKKLELDRRRIEEKITSLNRELYDLKFQRETQRSMRRKSN------LPNVALVGYTN 207
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKS++++ L D +F LFATL+ ++++VL + K LLSDTVGF+S+LP
Sbjct: 208 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLANNKEFLLSDTVGFVSNLP 267
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 268 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLKQIGADGIP---MIHVYN 324
Query: 420 KIDYHDEEMGD 430
KID D E+ D
Sbjct: 325 KIDLIDVEVLD 335
>gi|406943170|gb|EKD75236.1| hypothetical protein ACD_44C00200G0003 [uncultured bacterium]
Length = 415
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 167/295 (56%), Gaps = 32/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E ++ I ++ D + VN L+ Q+RNLE VLDR GLI++IF
Sbjct: 55 FIGSGKAEEVQKAIQTTQA----DLVLVNHTLTPSQERNLETLLKCRVLDRTGLILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + SRL+R G T R GG G + G
Sbjct: 111 QRARTFEGKLQVELAQLQHLASRLIR----------GWTHLE-------RQKGGIG-LRG 152
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R H+ Q+E+VR RA R +R+R LATV++VGYTNA
Sbjct: 153 PGETQLETDRRLIRNRIKHIGKQLEKVRIQRAQGRRSRQRSA------LATVSLVGYTNA 206
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ + F +LFATLD L+ + L P+ ++L+DTVGFI ++P L+ AF
Sbjct: 207 GKSTLFNCLTGAGSFVANQLFATLDTTLRRIKLTPTEPLILADTVGFIKNIPHTLIQAFR 266
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TLEE V A LL+HV+D ++P EE V +VL+++ L I ++NKID
Sbjct: 267 STLEEAVYATLLLHVIDASSPEREEQINEVEKVLKEIDAHATPL---IRIYNKID 318
>gi|315606386|ref|ZP_07881401.1| GTP-binding protein HflX [Prevotella buccae ATCC 33574]
gi|315251792|gb|EFU31766.1| GTP-binding protein HflX [Prevotella buccae ATCC 33574]
Length = 416
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 183/334 (54%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + + Y D F + V V+ + + G T+ G G +E IK +I E + E
Sbjct: 26 EAKTNEYLDELEFLADTAGAVTVKRFTQRVGGPNQTTYVGKGKLEEIKQYIQQEEDEERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQMRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL+R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQ 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ R + QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 197 RLVEIDRQKVTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+
Sbjct: 249 TLDTTVRKVVVDNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V L ++G +++ +MI V+NKID +
Sbjct: 309 EEQIKVVENTLGELGCADK--PSMI-VFNKIDNY 339
>gi|333902281|ref|YP_004476154.1| GTP-binding proten HflX [Pseudomonas fulva 12-X]
gi|333117546|gb|AEF24060.1| GTP-binding proten HflX [Pseudomonas fulva 12-X]
Length = 433
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 176/306 (57%), Gaps = 32/306 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ + + A G G VE ++ + E+ D + N +L+ Q+RNLER + VL
Sbjct: 47 SVPNSRPTAKFLIGSGKVEELRDQVKAHEA----DLVIFNHVLTPSQERNLERMFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLDHMSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQKLEKVRSQREQARRGRKRAD------I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
+V++VGYTNAGKSTL +AL++S++++ +LFATLDP L+ + L G V+L+DTVGFI
Sbjct: 199 PSVSLVGYTNAGKSTLFNALTESEVYAADQLFATLDPTLRRLQLDDLGPVVLADTVGFIR 258
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV+AF ATLEE +DLL+HV+D P + VL+VL ++G + ++E
Sbjct: 259 HLPHKLVEAFRATLEESSNSDLLLHVIDSHEPERDAQIEQVLEVLGEIGAQD---LPVLE 315
Query: 417 VWNKID 422
V+NK+D
Sbjct: 316 VYNKLD 321
>gi|282877949|ref|ZP_06286758.1| GTP-binding protein HflX [Prevotella buccalis ATCC 35310]
gi|281299950|gb|EFA92310.1| GTP-binding protein HflX [Prevotella buccalis ATCC 35310]
Length = 414
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 185/341 (54%), Gaps = 21/341 (6%)
Query: 85 LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-N 143
L N EE+ + Y D F + V V+ + K G ++ G G +E IK +I N
Sbjct: 19 LITQNQNEEKTNEYLDELEFLADTAGAVTVKRFTQKLGGPNMVSYVGKGKLEEIKQYIEN 78
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
E+ + + + LS Q RN+E+ +LDR LI++IF A T AK Q ELA
Sbjct: 79 EKENDRPVGMVIFDDELSAKQIRNIEKELQVKILDRTSLILDIFAMRAQTANAKTQVELA 138
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL R+ E + + G G + G GET+L++ RR IL+
Sbjct: 139 QYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQ 189
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R + L ++ E+ + + QR R R L VA+VGYTN GKSTL++ LS S++F
Sbjct: 190 RITLLKQRLIEIDKQKTTQRKNRGR--------LIRVALVGYTNVGKSTLMNLLSKSEVF 241
Query: 324 SDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVL 383
++ +LFATLD ++ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+
Sbjct: 242 AENKLFATLDTTVRKVVIENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVV 301
Query: 384 DCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
D + P+ EE V L+++ ++ K + V+NKID +
Sbjct: 302 DISHPDFEEQIRVVDNTLKELDAAD---KPTMIVFNKIDQY 339
>gi|445119990|ref|ZP_21379231.1| GTP-binding protein HflX [Prevotella nigrescens F0103]
gi|444839374|gb|ELX66444.1| GTP-binding protein HflX [Prevotella nigrescens F0103]
Length = 420
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 191/364 (52%), Gaps = 21/364 (5%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F V V+ + + G ++ G G + IK +I E + E + +
Sbjct: 32 YLDELEFLAHTAGAVTVKRFTQRVGGPNMTSYVGKGKLAEIKEYIKTKEDEDEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQLRNIENELQVKILDRTSLILDIFAMRAQTSNAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMTLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR RRR L VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKITQRKNRRR--------LIRVALVGYTNVGKSTIMNMLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VVL + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVLQNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIQV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
V + L+ + +E K I ++NKID + E + + + N S E K T ++
Sbjct: 315 VTETLKDLNCAE---KPSIIIFNKIDNYTWEEKEEDDLTPMTKKNVSLEELKRTWMAKLN 371
Query: 457 VECI 460
+C+
Sbjct: 372 DDCL 375
>gi|421478079|ref|ZP_15925850.1| GTP-binding protein HflX [Burkholderia multivorans CF2]
gi|400225325|gb|EJO55500.1| GTP-binding protein HflX [Burkholderia multivorans CF2]
Length = 396
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 181/333 (54%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++D + N L+ QQRNLERA + V+DR LI++
Sbjct: 52 AAMFIGSGKADELRL----ACEAHDVDIVIFNHALAPAQQRNLERALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++++RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS--GKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGADTIR---QVLVFNKIDA 320
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|413962512|ref|ZP_11401739.1| GTP-binding proten HflX [Burkholderia sp. SJ98]
gi|413928344|gb|EKS67632.1| GTP-binding proten HflX [Burkholderia sp. SJ98]
Length = 422
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 187/335 (55%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G VE ++ C N +++ + N L+ QQRNLE A + V+DR LI
Sbjct: 47 AKMFIGSGKVEELRLQCEAN------DVELVIFNHALAPAQQRNLEVALNRRVVDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S++E++RR QR R R+ R + +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKALKSRLEKLRRQHGTQRRQRARN-----RTM-SVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +G V++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVFLGEEAGHVVVSDTVGFIRELPHQ 256
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + AD+L+HV+D ++ + V +VL+ G+ + ++ ++ V+NKI
Sbjct: 257 LVAAFRATLEETIHADVLLHVVDASSAVRLDQIDQVNEVLR--GIGADNIRQIL-VFNKI 313
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E E ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGEAVERDEYGNISRVFLSARTGQGLD 348
>gi|227891542|ref|ZP_04009347.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
gi|227866689|gb|EEJ74110.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
Length = 419
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 170/306 (55%), Gaps = 35/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G E I+ H+ ++D + VNA L+ Q RNLE G V+DR LI+E
Sbjct: 47 AATYFGKGKAEEIR-HVGEI---NDIDTLIVNAELTPTQLRNLEDITGLQVIDRTALILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ ++A L Y+ RL T + + G+ G G+
Sbjct: 103 IFASRAQTKEAKLQVQIAKLQYQLPRL-------------RTSSINRMDQQTAGNTGGGY 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G+GET+L+L +R I +R S+L +++E+ QR AR R + TVA+VG
Sbjct: 150 TNRGSGETKLELNKRVIEKRISNLSKELKEIESVHENQRRARERS------SIKTVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
YTN GKST ++ L ++ ++F LFATLD ++ + LP K LSDTVGF+S
Sbjct: 204 YTNVGKSTTMNGLLKLLEQPTNKEVFEKDMLFATLDTSIRKIKLPDNKEFFLSDTVGFVS 263
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
DLP QLV AF TL E +ADLL+ V+D + + ++ T Q L ++GV + MI
Sbjct: 264 DLPHQLVKAFRTTLSEANQADLLIQVIDGSDEHAKDMIETTKQTLDEIGVKDIP---MIY 320
Query: 417 VWNKID 422
+NK D
Sbjct: 321 AYNKSD 326
>gi|161524642|ref|YP_001579654.1| GTP-binding proten HflX [Burkholderia multivorans ATCC 17616]
gi|189350602|ref|YP_001946230.1| GTP-binding protein [Burkholderia multivorans ATCC 17616]
gi|221198074|ref|ZP_03571120.1| GTP-binding protein HflX [Burkholderia multivorans CGD2M]
gi|221204368|ref|ZP_03577385.1| GTP-binding protein HflX [Burkholderia multivorans CGD2]
gi|160342071|gb|ABX15157.1| GTP-binding proten HflX [Burkholderia multivorans ATCC 17616]
gi|189334624|dbj|BAG43694.1| GTP-binding protein [Burkholderia multivorans ATCC 17616]
gi|221175225|gb|EEE07655.1| GTP-binding protein HflX [Burkholderia multivorans CGD2]
gi|221182006|gb|EEE14407.1| GTP-binding protein HflX [Burkholderia multivorans CGD2M]
Length = 396
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 181/333 (54%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++D + N L+ QQRNLERA + V+DR LI++
Sbjct: 52 AAMFIGSGKADELRL----ACEAHDVDIVIFNHALAPAQQRNLERALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++++RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS--GKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGADTIR---QVLVFNKIDA 320
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|163786791|ref|ZP_02181239.1| hypothetical protein FBALC1_16437 [Flavobacteriales bacterium
ALC-1]
gi|159878651|gb|EDP72707.1| hypothetical protein FBALC1_16437 [Flavobacteriales bacterium
ALC-1]
Length = 403
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 178/320 (55%), Gaps = 33/320 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + K TF G G +E ++ + + E+ + + LS Q+RN+ +
Sbjct: 45 VVKRYTQKMDMPNPKTFIGTGKMEDVRRFV----EENEVGTVIFDDELSPAQERNISKIL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 NCKILDRTNLILDIFAQRAQTSYARTQVELAQCEYLLPRL------KGMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + ++ + L S+I+ + + AVQR R +
Sbjct: 149 -----RQKGGIG-MRGPGETEIETDRRIVRDKITLLKSKIKTIDKQMAVQRGNRGK---- 198
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTV 352
+ VA+VGYTN GKSTL++ +S S +F++ +LFATLD ++ VV+ + L+SDTV
Sbjct: 199 ----MVRVALVGYTNVGKSTLMNVISKSKVFAENKLFATLDTTVRKVVIGNLPFLVSDTV 254
Query: 353 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 412
GFI LP QLV++F +TL+EV EADLL+HV+D + N EEH +V Q+L ++ E K K
Sbjct: 255 GFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHSNFEEHIDSVNQILDEI---ESKDK 311
Query: 413 NMIEVWNKIDYHDEEMGDVE 432
I V+NKID ++ E D E
Sbjct: 312 PTIMVFNKIDAYEAEPFDEE 331
>gi|358011368|ref|ZP_09143178.1| GTP-binding protein [Acinetobacter sp. P8-3-8]
Length = 443
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 177/322 (54%), Gaps = 38/322 (11%)
Query: 107 ELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
E+ H+ VQ K A F G G E I + + E++ + + LS Q+R
Sbjct: 41 EIFEHLTVQRV-----KPDAKFFIGTGKAEEIAERV----TNEEIELVIFDQALSPAQER 91
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLER V+DR GLI++IF A T E KLQ ELA L + SRLVR R
Sbjct: 92 NLERILKCRVIDRTGLILDIFAQRARTHEGKLQVELAQLDHLSSRLVRSR---------- 141
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
S GG G + G GET L+ RR + R L ++E+VR+TR RAAR
Sbjct: 142 -------SNLDSQKGGIG-LRGPGETLLETDRRLLRIRMEQLKDRLEKVRKTRTQGRAAR 193
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GK 345
++ + TV++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ + G
Sbjct: 194 QKAN------IPTVSLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLDWEGIGT 247
Query: 346 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 405
++L+DTVGF+ +L LV++F ATLEE +EA LL+H++D +P + E V VL ++G
Sbjct: 248 LVLADTVGFVRNLAHSLVESFKATLEETLEATLLLHIIDSNSPEMMEQIEAVETVLNEIG 307
Query: 406 VSEEKLKNMIEVWNKIDYHDEE 427
L+ V+NKID EE
Sbjct: 308 ADIPTLR----VYNKIDQSGEE 325
>gi|167562556|ref|ZP_02355472.1| GTP-binding protein HflX [Burkholderia oklahomensis EO147]
gi|167569738|ref|ZP_02362612.1| GTP-binding protein HflX [Burkholderia oklahomensis C6786]
Length = 392
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 181/335 (54%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 52 AAMFVGSGKAEELRLACEAN------DVEIVIFNHALAPAQQRNLERMLNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L +++E++RR QR R R G +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKMLKTRLEKLRRQHHTQRRQRARSG------TMSVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 261
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V +VL ++G + I V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNEVLHEIGADSIR---QILVFNKI 318
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E + ++ D+ N SR T + +D
Sbjct: 319 DAVPELEARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|443326320|ref|ZP_21054978.1| GTP-binding protein HflX [Xenococcus sp. PCC 7305]
gi|442794060|gb|ELS03489.1| GTP-binding protein HflX [Xenococcus sp. PCC 7305]
Length = 573
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 182/327 (55%), Gaps = 47/327 (14%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV+Q S K + T G G V+ I I + + + + LS Q RNLE
Sbjct: 247 VVLQTISQKRARPHPQTVVGAGKVQEIALRIQTTGA----NLVVFDRDLSPAQGRNLESQ 302
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
+G V+DR +I++IF A ++ KLQ ELA L Y RLV
Sbjct: 303 FGIRVVDRTEVILDIFAQRAQSRAGKLQVELAQLEYMLPRLV------------------ 344
Query: 232 VVSARGRGSGGRGFISGAG-----ETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
GRG G G ET+L+ +RR I ++ +HL + E++ R+ R R
Sbjct: 345 -----GRGQAMSRLGGGIGTRGPGETKLETERRSIQKKITHLQRDVNELQAHRSRLRKQR 399
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP---S 343
++ +ATVA+VGYTNAGKSTL++AL++SD+++ RLFATLDP + + +P +
Sbjct: 400 QKQD------IATVAIVGYTNAGKSTLINALTNSDVYAADRLFATLDPTTRRLAIPDPVT 453
Query: 344 GK---VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQV 400
GK +LL+DTVGFI +LP LVDAF ATLEEV EAD L+HV+D + P+ + +V+++
Sbjct: 454 GKPCNILLTDTVGFIQELPPSLVDAFRATLEEVTEADTLLHVVDLSHPSWQNQIRSVMKI 513
Query: 401 LQQVGVSEEKLKNMIEVWNKIDYHDEE 427
LQ++ ++ + M+ V+NK+D D E
Sbjct: 514 LQEMPLA---VGPMLLVFNKLDQVDSE 537
>gi|254975808|ref|ZP_05272280.1| putative GTP-binding protein [Clostridium difficile QCD-66c26]
gi|255093195|ref|ZP_05322673.1| putative GTP-binding protein [Clostridium difficile CIP 107932]
gi|255314937|ref|ZP_05356520.1| putative GTP-binding protein [Clostridium difficile QCD-76w55]
gi|255517611|ref|ZP_05385287.1| putative GTP-binding protein [Clostridium difficile QCD-97b34]
gi|255650722|ref|ZP_05397624.1| putative GTP-binding protein [Clostridium difficile QCD-37x79]
gi|306520638|ref|ZP_07406985.1| putative GTP-binding protein [Clostridium difficile QCD-32g58]
gi|384361440|ref|YP_006199292.1| GTP-binding protein [Clostridium difficile BI1]
Length = 423
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 174/311 (55%), Gaps = 39/311 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE I +N + + IF N LS Q +NLE ++DR LI++IF
Sbjct: 53 YIGTGKVEEI---LNLIKKENIEIVIFYNE-LSTSQLKNLEEKLNCEIIDRTALILDIFA 108
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A T+EAKLQ E+A+L Y RL+ G + L GR SGG G +
Sbjct: 109 QRAKTREAKLQVEVASLKYMLPRLI---GSNENL--------------GRQSGGVGTKNR 151
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GE +L+L RRRI E+ + L ++ +++ R QR+ RR+ L VA+VGYTN
Sbjct: 152 GSGEKKLELDRRRIEEKITSLNRELYDLKFQRETQRSMRRKSN------LPNVALVGYTN 205
Query: 308 AGKSTLVSALSD-------SDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKS++++ L D +F LFATL+ ++++VL + K LLSDTVGF+S+LP
Sbjct: 206 AGKSSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLANNKEFLLSDTVGFVSNLP 265
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV AF +TLEE EAD+L+HV+D + P+ + H L+Q+G MI V+N
Sbjct: 266 HDLVKAFRSTLEEACEADVLLHVIDISNPSYKSHIKVTEDTLKQIGADGIP---MIHVYN 322
Query: 420 KIDYHDEEMGD 430
KID D E+ D
Sbjct: 323 KIDLIDVEVLD 333
>gi|194467117|ref|ZP_03073104.1| GTP-binding proten HflX [Lactobacillus reuteri 100-23]
gi|194454153|gb|EDX43050.1| GTP-binding proten HflX [Lactobacillus reuteri 100-23]
Length = 425
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 196/387 (50%), Gaps = 51/387 (13%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE I+ + I N LS Q RNLE G +LDR LI+EIF
Sbjct: 56 TYFGKGKVEEIR----DVADANHVPTIITNDELSPSQLRNLEEGTGCRILDRTALILEIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL +T +E + + GG GF +
Sbjct: 112 ATRAQSKEAKLQVQIAELQYRLPRL-------------QTSASERLDQQT--GGGSGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I + SHL ++ + ++ +R R + + T A+VGYT
Sbjct: 157 RGAGETKLEMDRRTIQHQISHLRQELAAIDKSEQTKRKQRAK------SAIPTAALVGYT 210
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
NAGKST+++ L + +F LFATLD ++ + LP K LLSDTVGF+S L
Sbjct: 211 NAGKSTIMNGLVRRYGAAEEKTVFEKNMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKL 270
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P LV++F +TL E ADLL+ V+D + P+ +E T + L+Q+G+++ MI V+
Sbjct: 271 PTHLVESFKSTLAEAANADLLIQVIDYSDPHYKEMMETTNETLKQIGINDIP---MINVF 327
Query: 419 NKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN-------N 471
NK D + E +E GDD S +D S + V+ I + D
Sbjct: 328 NKADKTEIEFPILE---GDDQVVISAKQD---ASLDLLVDVIKKHLFKDYVTTTLLIPFT 381
Query: 472 DGFVSEDLGESMNKNHNDY-SDGWLLS 497
DG V L E N Y SDG LL+
Sbjct: 382 DGHVVSYLNEHTNILDTTYASDGTLLT 408
>gi|421470069|ref|ZP_15918478.1| GTP-binding protein HflX [Burkholderia multivorans ATCC BAA-247]
gi|400228576|gb|EJO58501.1| GTP-binding protein HflX [Burkholderia multivorans ATCC BAA-247]
Length = 391
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 184/333 (55%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++D + N L+ QQRNLERA + V+DR LI++
Sbjct: 47 AAMFIGSGKADELRL----ACEAHDVDIVIFNHALAPAQQRNLERALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++++RR + QR R R G +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHSTQRRQRARSG------TMSVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS--GKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 258
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 259 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 315
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 316 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|392374268|ref|YP_003206101.1| GTPase [Candidatus Methylomirabilis oxyfera]
gi|258591961|emb|CBE68266.1| putative GTPase [Candidatus Methylomirabilis oxyfera]
Length = 389
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 175/312 (56%), Gaps = 34/312 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
G G + IK A+ G++D + ++ LSG QQR+LE G +DR LI++IF+
Sbjct: 66 LIGKGKAQEIK-----AQWGGKVDLLVIDEELSGSQQRSLEELTGWKTVDRPLLILDIFS 120
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A ++E KLQ ELA L Y+ RLV + RL G
Sbjct: 121 QRARSREGKLQVELAQLDYRLPRLVGMGTQLSRLGGGIGTRGPG---------------- 164
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
ET+L+ RR I R + + ++ +VRR RA+ R R+RH + VA+VGYTNA
Sbjct: 165 --ETQLETDRRTIRRRMAKIREELAKVRRHRALLRRPRKRHA------IPIVALVGYTNA 216
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFH 367
GKSTL +AL+ S + +D LF TLDP L+ V + G LLSDTVGFI LP QLV AF
Sbjct: 217 GKSTLFNALTHSGVQTDDALFVTLDPILRRVTMADGFGFLLSDTVGFIRRLPEQLVTAFK 276
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
ATLEE+ EADLL+HV+D + P + E + V +L+++G+S K ++EV+NK+D
Sbjct: 277 ATLEELDEADLLLHVIDASHPQVMEQKEAVDTILRELGLST---KPIVEVFNKMDRLTGG 333
Query: 428 MGDVEYIDGDDI 439
+G +I G I
Sbjct: 334 IGQ-SFIGGKTI 344
>gi|363582531|ref|ZP_09315341.1| GTP-binding protein HflX [Flavobacteriaceae bacterium HQM9]
Length = 409
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/328 (35%), Positives = 182/328 (55%), Gaps = 38/328 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ + K + TF G G +E ++ ++ + ++ + + L+ QQ+N+E+
Sbjct: 45 VVKRFTQKMQMPNSKTFIGSGKMEEVQAYV----EQHDIGTVVFDDELTPSQQKNIEKIL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
++DR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 KAKIIDRTNLILDIFAQRAQTSYARTQVELAQYQYLLPRLA------GMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + +R S L ++++ + R A QR R +
Sbjct: 149 -----RQKGGIG-MRGPGETEIETDRRIVRDRISLLKNKLKTIDRQMATQRGNRGK---- 198
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTV 352
L VA+VGYTN GKSTL++ +S S++F++ +LFATLD ++ VV+ + LLSDTV
Sbjct: 199 ----LVRVALVGYTNVGKSTLMNVISKSNVFAENKLFATLDTTVRKVVIGNLPFLLSDTV 254
Query: 353 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 412
GFI LP QLV++F +TL+EV EADLL+HV+D + P E+H +V +L ++ + K
Sbjct: 255 GFIRKLPTQLVESFKSTLDEVREADLLLHVVDISHPQFEDHIESVNTILNEIDCKD---K 311
Query: 413 NMIEVWNKIDYHDEEMGDVEYIDGDDIS 440
I V+NKID + E I+ DD++
Sbjct: 312 RTIMVFNKIDAYTHET-----IEEDDLT 334
>gi|377810109|ref|YP_005005330.1| GTP-binding protein HflX [Pediococcus claussenii ATCC BAA-344]
gi|361056850|gb|AEV95654.1| GTP-binding protein HflX [Pediococcus claussenii ATCC BAA-344]
Length = 421
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 180/328 (54%), Gaps = 42/328 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G +E I + + D + V+ LS Q NLE+ G LDR GLI+EIF
Sbjct: 52 TYFGSGKLE----EITNLATAQKADTVVVSEELSPSQLSNLEKETGLHFLDRTGLILEIF 107
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
AH++EAKLQ ELA L Y+ RL T ++ + + G+ G G+ +
Sbjct: 108 ANRAHSREAKLQVELAKLEYQLPRL-------------RTSSSQRLDQQTAGNAGGGYTN 154
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L+L RR I + +H+ +++E+ + VQR R D + + +VA+VGYT
Sbjct: 155 RGAGETKLELNRRTIRNKIAHINKELKEISTSSEVQRKQR------DKKDIPSVALVGYT 208
Query: 307 NAGKST----LVSALSDSD---LFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
N GKST LV SD +F LFATLD ++ + P K ++LSDTVGF+S L
Sbjct: 209 NTGKSTTMNGLVRMFGRSDEKQVFEKNMLFATLDTSVRKLSFPDRKEIVLSDTVGFVSHL 268
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P L+ AF +TL E +ADLLV V+D + P+ E TT + L+++GV++ M+ +
Sbjct: 269 PHHLIQAFRSTLAEAAQADLLVQVVDLSDPHYREMMTTTEETLREIGVTDVP---MVYAF 325
Query: 419 NKIDYHDEEMGDVEY--IDGDDISNFSR 444
NK D + V Y +DG ++ +R
Sbjct: 326 NKAD-----LAGVTYPTLDGTQLTYSAR 348
>gi|313145182|ref|ZP_07807375.1| GTP-binding protein [Bacteroides fragilis 3_1_12]
gi|423280163|ref|ZP_17259076.1| GTP-binding protein HflX [Bacteroides fragilis HMW 610]
gi|424666296|ref|ZP_18103332.1| GTP-binding protein HflX [Bacteroides fragilis HMW 616]
gi|313133949|gb|EFR51309.1| GTP-binding protein [Bacteroides fragilis 3_1_12]
gi|404573835|gb|EKA78587.1| GTP-binding protein HflX [Bacteroides fragilis HMW 616]
gi|404584499|gb|EKA89164.1| GTP-binding protein HflX [Bacteroides fragilis HMW 610]
Length = 417
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 181/334 (54%), Gaps = 22/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHING-AESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I AE E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIKEYIRTEAEEDRE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELQVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ T E S +G G RG GET+L++ RR IL R S L
Sbjct: 146 RLQRL------WTHLERQGGGSGSGKGGSVGLRG----PGETQLEMDRRIILNRMSLLKE 195
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 196 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTMMNLLAKSEVFAENKLFA 247
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 248 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPGF 307
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G K MI ++NKID +
Sbjct: 308 EEQIEVVNKTLADIGGGG---KPMILIFNKIDAY 338
>gi|402758039|ref|ZP_10860295.1| GTP-binding proten HflX [Acinetobacter sp. NCTC 7422]
Length = 447
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 182/317 (57%), Gaps = 37/317 (11%)
Query: 107 ELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
E+ H++VQ K F G G V+ I + E+ + + + LS Q+R
Sbjct: 41 EILEHLIVQR-----NKPDPKFFIGSGKVDEIAELVKSHEA----ELVIFDHSLSPAQER 91
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLER V+DR GLI++IF A T E KLQ ELA L + +RL+R G
Sbjct: 92 NLERILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GF 141
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
TG E + GG G + G GE++L+ RR I R + L ++ +V++TR RAAR
Sbjct: 142 TGNLE------QQKGGIG-LRGPGESQLETDRRLIRVRITQLKDKLTKVQQTRLQGRAAR 194
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GK 345
++ + T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + G
Sbjct: 195 QK------AAIPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLDWDGVGT 248
Query: 346 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 405
V+L+DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++PN+ E V VL+++G
Sbjct: 249 VVLADTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSPNMPEQIEAVESVLKEIG 308
Query: 406 VSEEKLKNMIEVWNKID 422
+++V+NKID
Sbjct: 309 AD----APVLQVYNKID 321
>gi|160893538|ref|ZP_02074323.1| hypothetical protein CLOL250_01090 [Clostridium sp. L2-50]
gi|156864933|gb|EDO58364.1| GTP-binding protein HflX [Clostridium sp. L2-50]
Length = 437
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 175/313 (55%), Gaps = 30/313 (9%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
+A +D + G G VE ++ + ++ G + + LS Q NL+ A V+DR +
Sbjct: 66 RATSDLYLGSGKVEELRSMVAMYDATG----VVCDDELSPAQLMNLQDALNIKVMDRTMV 121
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF AHA + E KLQ ELA L ++ +RLV +R RL G
Sbjct: 122 ILDIFAAHAGSYEGKLQVELAQLRFRATRLVGMRDSLSRLGGGIGTRGPG---------- 171
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
E +L++ RR I +R S L + + +V R QR R R G + V++
Sbjct: 172 --------EKKLEIDRRVIRDRISKLKADLRQVEGRRTEQRKQRNRTG------IPVVSI 217
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQ 361
VGYTNAGKSTL++ L+ + + + +LFATLDP ++ VLP+G+ VL +DTVGFI LP
Sbjct: 218 VGYTNAGKSTLLNKLTGAGVLEEDKLFATLDPATRNAVLPAGQQVLFTDTVGFIRKLPHH 277
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV+AF +TLEE +D+++HV+D + PN + + TV L+Q+ V EEK +I V+NKI
Sbjct: 278 LVEAFKSTLEEAKYSDVILHVVDASDPNWDRNMETVYATLRQLNVDEEKDHPIITVFNKI 337
Query: 422 DYHDEEMGDVEYI 434
D E GD+ I
Sbjct: 338 DKLPEG-GDISMI 349
>gi|402308562|ref|ZP_10827566.1| GTP-binding protein HflX [Prevotella sp. MSX73]
gi|400375013|gb|EJP27923.1| GTP-binding protein HflX [Prevotella sp. MSX73]
Length = 416
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 180/328 (54%), Gaps = 21/328 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKG-ELDAIFV 156
Y D F + V V+ + + G T+ G G +E IK +I E + E+ +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVGGPNQTTYVGKGKLEEIKQYIQQEEDEDREIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
R + QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 RQKVTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVVDNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPDFEEQIKV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
V L ++G +++ +MI V+NKID +
Sbjct: 315 VENTLGELGCADK--PSMI-VFNKIDNY 339
>gi|296121964|ref|YP_003629742.1| GTP-binding proten HflX [Planctomyces limnophilus DSM 3776]
gi|296014304|gb|ADG67543.1| GTP-binding proten HflX [Planctomyces limnophilus DSM 3776]
Length = 464
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/303 (40%), Positives = 170/303 (56%), Gaps = 33/303 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T GPG +E +K + E++ EL IF N + G Q R LE+ G+ ++DR LI++IF
Sbjct: 89 TCLGPGKIEELKLILE--ETRAEL-VIFDNNLTPG-QGRRLEQETGRVIVDRSELILDIF 144
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
HA T EA+LQ ELA L Y ++RL R+ R+ GG G
Sbjct: 145 ATHARTAEARLQVELAQLQYNRTRLKRLWTHLERI-----------------DGGIGASR 187
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +++ RR I +R S L S ++EV + R RR H A V++VGYTN
Sbjct: 188 GPGEKQIETDRRLIDQRISELQSSLKEVEQRRERMVKQRRDH--------ALVSLVGYTN 239
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL+ AL+ +++ +LFATLD + + +P G LLSDTVGF+ DLP LV +F
Sbjct: 240 AGKSTLMRALTGEEVYIADQLFATLDTKTRLWKIPGWGDALLSDTVGFVRDLPHSLVASF 299
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
+TLEE ADLL+HV+D + P E TV VL+++GV +LKN I V NK D +
Sbjct: 300 KSTLEEARHADLLLHVVDASNPEAEAQVATVEAVLEEIGV---ELKNFILVLNKADQVPD 356
Query: 427 EMG 429
M
Sbjct: 357 RMA 359
>gi|317503711|ref|ZP_07961728.1| GTP-binding protein HflX [Prevotella salivae DSM 15606]
gi|315665232|gb|EFV04882.1| GTP-binding protein HflX [Prevotella salivae DSM 15606]
Length = 415
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 186/335 (55%), Gaps = 22/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN-GAESKGE 150
E + Y D F + V V+ + K+ + T+ G G +E I+ +I AE++
Sbjct: 26 EAKTKEYLDELEFLADTAGAVTVKRFTQKANGPSSVTYVGKGKLEEIREYIEMCAENEDP 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQIRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELAQHRYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL+R + L
Sbjct: 146 RLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRITLLKQ 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++EE+ + + QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 197 RLEEIDKQKNTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+
Sbjct: 249 TLDTTVRKVVIDNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
EE V + L +G SE+ +MI ++NKID YH
Sbjct: 309 EEQIQVVEKTLSDLGCSEK--PSMI-IFNKIDNYH 340
>gi|330444282|ref|YP_004377268.1| GTP binding protein [Chlamydophila pecorum E58]
gi|328807392|gb|AEB41565.1| GTP binding protein [Chlamydophila pecorum E58]
Length = 421
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 172/298 (57%), Gaps = 27/298 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A TF G + I+ + S G L V+ +S QQRNLER G VLDR LI+E
Sbjct: 44 ASTFLNEGKLLEIEGILEAYPSLGTL---IVDEEISASQQRNLERRLGVAVLDRTELILE 100
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A + EA LQ ELA Y RL R+ G +S + G G GF
Sbjct: 101 IFASRALSLEAGLQVELAQAKYLLPRLKRMWGH--------------LSRQKSGGGAGGF 146
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GE +++L RR + E+ L +QI E+ + R +R A+ R G + T A++GY
Sbjct: 147 VKGEGEKQIELDRRMVQEKIHKLSAQIREIEKQREGRRKAKVRSG------IPTFALIGY 200
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVD 364
TN+GKS+L++ L+ +D +++ +LFATLDP+ ++ VLP G +VL++DTVGFI LP LV
Sbjct: 201 TNSGKSSLLNVLTAADTYTEDKLFATLDPKTRTSVLPGGRRVLVTDTVGFIRKLPHTLVA 260
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF +TLE + D+L+HV+D + P EEH T +L+++ + K MI V NK+D
Sbjct: 261 AFKSTLEAALHEDVLLHVVDASHPLAEEHIQTTFALLKELHIEHPK---MITVLNKVD 315
>gi|288926220|ref|ZP_06420146.1| GTP-binding protein HflX [Prevotella buccae D17]
gi|288336999|gb|EFC75359.1| GTP-binding protein HflX [Prevotella buccae D17]
Length = 416
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 180/328 (54%), Gaps = 21/328 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGELDAIFV 156
Y D F + V V+ + + G T+ G G +E IK +I E + E+ +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVGGPNQTTYVGKGKLEEIKQYIQQEEDEEREIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
R + QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 RQKVTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVVDNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPDFEEQIKV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
V L ++G +++ +MI V+NKID +
Sbjct: 315 VENTLGELGCADK--PSMI-VFNKIDNY 339
>gi|390568829|ref|ZP_10249121.1| GTP-binding proten HflX [Burkholderia terrae BS001]
gi|389939178|gb|EIN01015.1| GTP-binding proten HflX [Burkholderia terrae BS001]
Length = 414
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 184/335 (54%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N ++D + N L+ QQRNLER + V+DR LI
Sbjct: 52 AAMFVGSGKAEELRLACEAN------DIDIVIFNHALAPAQQRNLERTLNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L ++E++RR QR AR R+ +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKMLKGRLEKLRRQHGTQRRARARNR------TMSVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS--GKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGEEVGQIVVSDTVGFIRELPHQ 261
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ + V VL+++G + ++ ++ V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNDVLREIGA--DTIRQVL-VFNKI 318
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E + ++ D+ N SR T + +D
Sbjct: 319 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|416938398|ref|ZP_11934272.1| GTP-binding proten HflX [Burkholderia sp. TJI49]
gi|325524781|gb|EGD02755.1| GTP-binding proten HflX [Burkholderia sp. TJI49]
Length = 396
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 183/333 (54%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++D + N L+ QQRNLERA + V+DR LI++
Sbjct: 52 AAMFIGSGKADELRL----ACEAHDVDIVIFNHALAPAQQRNLERALSRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS--GKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 320
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|257455507|ref|ZP_05620739.1| GTP-binding protein HflX [Enhydrobacter aerosaccus SK60]
gi|257447076|gb|EEV22087.1| GTP-binding protein HflX [Enhydrobacter aerosaccus SK60]
Length = 456
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 178/316 (56%), Gaps = 36/316 (11%)
Query: 115 QNPSLKSG---KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
Q +L +G K A F G G E I + E+ D + N L+ Q+RN+ER
Sbjct: 42 QKQALVTGTRSKPDAKYFVGTGKAEEIGELVKQYEA----DIVIFNHSLTPSQERNIERL 97
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
VLDR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 98 VQCRVLDRTGLILDIFAQRARTYEGKLQVELAQLNHLATRLVR----------GWT---- 143
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G + G GET+L+ RR + R L +++++V++TRA RA R++
Sbjct: 144 ---HLERQKGGIG-LRGPGETQLETDRRLLQVRVGQLKAKLDKVKQTRAQGRAKRQK--- 196
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSD 350
+ T+++VGYTNAGKSTL + L+ ++++ +LFATLDP L+SV GKV+L D
Sbjct: 197 ---SSVPTISLVGYTNAGKSTLFNTLTHENIYAANQLFATLDPTLRSVSWSGVGKVVLVD 253
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGF+ LP +LV+AFHATLEE +EADLL+HV+D ++ E V VL ++ +
Sbjct: 254 TVGFVRHLPHELVEAFHATLEETLEADLLLHVIDSHREDMHEQIAAVQSVLAEI----DN 309
Query: 411 LKNMIEVWNKIDYHDE 426
++ V+NKID E
Sbjct: 310 QVPVLNVFNKIDLTGE 325
>gi|163753670|ref|ZP_02160793.1| GTP-binding protein HflX [Kordia algicida OT-1]
gi|161325884|gb|EDP97210.1| GTP-binding protein HflX [Kordia algicida OT-1]
Length = 413
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/312 (37%), Positives = 175/312 (56%), Gaps = 38/312 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ ++ + ++ ++ + LS QQ+N+ER ++DR GLI++IF
Sbjct: 70 TFIGTGKMDEVEQFVKS----NDIGSVIFDDELSPSQQKNIERLLKCKIIDRTGLILDIF 125
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 126 AQRAKTSYARTQVELAQYQYLLPRLT------GLWTHLE-----------RQRGGIG-MR 167
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + ++ + L ++ + + AVQR R L VA+VGYTN
Sbjct: 168 GPGETEIETDRRIVRDKIALLRKKMVTIDKQMAVQRGNRG--------ALIRVALVGYTN 219
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP QLVD+F
Sbjct: 220 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVIGNLPFLLSDTVGFIRKLPTQLVDSFK 279
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV EADLL+HV+D + PN E+H +V Q+L ++ + K + V+NKID + E
Sbjct: 280 STLDEVREADLLLHVVDISHPNFEDHIASVNQILSEIKSGD---KPTVMVFNKIDAYTHE 336
Query: 428 MGDVEYIDGDDI 439
ID DD+
Sbjct: 337 T-----IDSDDL 343
>gi|302346272|ref|YP_003814570.1| GTP-binding protein HflX [Prevotella melaninogenica ATCC 25845]
gi|302150862|gb|ADK97123.1| GTP-binding protein HflX [Prevotella melaninogenica ATCC 25845]
Length = 416
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 173/299 (57%), Gaps = 22/299 (7%)
Query: 128 TFFGPGTVETIKCHINGAESKGE-LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
T+ G G +E I+ +I E + E + + + LS Q RN+E+ G +LDR LI++I
Sbjct: 62 TYVGKGKLEEIRDYIKMKEDEEEPIGMVIFDDELSAKQMRNIEQELGVKILDRTSLILDI 121
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A T AK Q ELA Y RL R+ E + + G G +
Sbjct: 122 FAMRAQTANAKTQVELAQYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGL 172
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+L++ RR IL+R + L ++ E+ + + QR R R + VA+VGYT
Sbjct: 173 RGPGETQLEMDRRIILQRMTLLKQRLAEIDKQKVTQRKNRGR--------MIRVALVGYT 224
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAF 366
N GKST ++ L+ S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP LVD+F
Sbjct: 225 NVGKSTTMNLLAKSEVFAENKLFATLDTTVRKVVVDNLPFLLADTVGFIRKLPTDLVDSF 284
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
+TL+EV EADLL+HV+D + P+ EE V Q L ++G +++ +MI ++NKID YH
Sbjct: 285 KSTLDEVREADLLLHVVDISHPDFEEQIQVVNQTLSELGCADK--PSMI-IFNKIDNYH 340
>gi|410096404|ref|ZP_11291391.1| GTP-binding protein HflX [Parabacteroides goldsteinii CL02T12C30]
gi|409226368|gb|EKN19277.1| GTP-binding protein HflX [Parabacteroides goldsteinii CL02T12C30]
Length = 403
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 169/295 (57%), Gaps = 33/295 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q RN+E+ +LDR LI++IF
Sbjct: 62 TFVGTGKLQEIKEYV----IENEIGLVIFDDELSPKQLRNIEKELQVKILDRTSLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 ASRAQTANAKTQVELAQYKYMLPRLTRLW-----------------THLERQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ +R IL++ + L + ++ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGETQLETDKRIILDKIAKLKRDLVDIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ LS SD+F++ +LFATLD ++ V++ + LLSDTVGFI LP +LV++F
Sbjct: 212 VGKSTLMNQLSKSDVFAENKLFATLDTTVRKVIVENLPFLLSDTVGFIRKLPTELVESFK 271
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV EADLLVHV+D + P EE V + L ++ +E K MI V+NKID
Sbjct: 272 STLDEVREADLLVHVVDISHPTFEEQIEVVNKTLAEIDKTE---KPMIMVFNKID 323
>gi|393786613|ref|ZP_10374745.1| GTP-binding protein HflX [Bacteroides nordii CL02T12C05]
gi|392657848|gb|EIY51478.1| GTP-binding protein HflX [Bacteroides nordii CL02T12C05]
Length = 421
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 183/334 (54%), Gaps = 20/334 (5%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + Y D F E VV+ + K A + T+ G G +E IK +I N E++ E
Sbjct: 26 ERKTKEYLDELEFLAETAGAEVVKKFTQKLPTANSVTYVGKGKLEEIKEYILNEEENERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKIKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ + S G G GG + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL--------WTHLERQGGGSGSGSGKGGSVGLRGPGETQLEMDRRIILNRMSLLKE 197
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 198 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFA 249
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+HV+D + P
Sbjct: 250 TLDTTVRKVIIENLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPGF 309
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G + K MI ++NKID +
Sbjct: 310 EEQIEVVNKTLADIGGAG---KPMILIFNKIDAY 340
>gi|340347601|ref|ZP_08670709.1| GTP-binding protein HflX [Prevotella dentalis DSM 3688]
gi|433652495|ref|YP_007296349.1| GTP-binding protein HflX [Prevotella dentalis DSM 3688]
gi|339609297|gb|EGQ14172.1| GTP-binding protein HflX [Prevotella dentalis DSM 3688]
gi|433303028|gb|AGB28843.1| GTP-binding protein HflX [Prevotella dentalis DSM 3688]
Length = 415
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 182/328 (55%), Gaps = 21/328 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGELDAIFV 156
Y D F + V V+ + + G A T+ G G +E I+ +I + E++ E+ +
Sbjct: 32 YLDELEFLADTAGAVTVRRFTQRVGGPSAVTYVGKGKLEEIRQYIKDEEENEREVGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E A +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIENALQVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRITLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
R + QR R R L VA+VGYTN GKST+++ ++ S++F++ +LFATLD +
Sbjct: 203 RQKTTQRKNRGR--------LIRVALVGYTNVGKSTIMNLMAKSEVFAEDKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVVENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIEV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
V Q L+++ +E K + V+NK D +
Sbjct: 315 VNQTLKELDCAE---KPTMMVFNKTDKY 339
>gi|71064931|ref|YP_263658.1| GTP - binding protein, phage lambda cII repressor [Psychrobacter
arcticus 273-4]
gi|71037916|gb|AAZ18224.1| probable GTP - binding protein, possible phage lambda cII repressor
[Psychrobacter arcticus 273-4]
Length = 489
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/307 (41%), Positives = 178/307 (57%), Gaps = 35/307 (11%)
Query: 123 KARADT--FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
+AR D F G G E I + ++ D + N LS Q+RN+E VLDR
Sbjct: 51 RARPDARYFVGSGKAEEIAELVREHDA----DIVLFNHSLSPSQERNIEALVQCRVLDRT 106
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLI++IF A T E KLQ ELA L + +RLVR G T R
Sbjct: 107 GLILDIFAQRARTYEGKLQVELAQLNHLSTRLVR----------GWT-------HLERQK 149
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG G + G GET+L+ RR + R L S+IE+VR+TRA RA R++ SD + T+
Sbjct: 150 GGIG-LRGPGETQLETDRRLLQVRVMQLKSRIEKVRQTRAQGRARRQK---SD---VPTI 202
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLP 359
++VGYTNAGKSTL + L D ++++ +LFATLDP L+ + G+V+L DTVGF+ LP
Sbjct: 203 SLVGYTNAGKSTLFNRLVDENIYAADKLFATLDPTLRRLDWQGVGRVVLVDTVGFVRHLP 262
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
+LV++FHATLEE +EADLL+HV+D ++ ++ E V VL ++ + ++ V+N
Sbjct: 263 HELVESFHATLEETLEADLLLHVIDSSSEDMHEQIQAVKDVLAEI----DNDVPVLNVYN 318
Query: 420 KIDYHDE 426
KID DE
Sbjct: 319 KIDLTDE 325
>gi|302339575|ref|YP_003804781.1| GTP-binding proten HflX [Spirochaeta smaragdinae DSM 11293]
gi|301636760|gb|ADK82187.1| GTP-binding proten HflX [Spirochaeta smaragdinae DSM 11293]
Length = 429
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/301 (43%), Positives = 169/301 (56%), Gaps = 36/301 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
G G E I A+S ELDA I ++ L+ QQRN ER G V+DR +I+EI
Sbjct: 68 LLGSGKSEEI------ADSADELDAGVIIIDDDLTPRQQRNWERLSGCVVIDRQEVILEI 121
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A T+EA LQ LA + Y RL R A +R RG G RG
Sbjct: 122 FADRAATREASLQVALARMEYSLPRLTR---------------AWTHLSRQRG-GSRG-T 164
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+L+ RR +L + + L ++E VRR RA R RR L TVA+VGYT
Sbjct: 165 RGEGETQLESDRRIVLAKVAKLKKELEGVRRQRATARKQRR------SVPLPTVALVGYT 218
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDA 365
NAGKS+L++AL+ S + ++ +LFATLDP + + L G+ VLL+DTVGFI LP LVDA
Sbjct: 219 NAGKSSLLNALAGSAVNAEDKLFATLDPTTRRLELSGGRSVLLTDTVGFIRKLPHALVDA 278
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY-H 424
F ATLEE + ADLL+HV+D + P EH T QVL ++G + I V NK D H
Sbjct: 279 FRATLEETLLADLLIHVIDASDPEAVEHYRTTRQVLSEIGAED---TEQIIVLNKADLPH 335
Query: 425 D 425
D
Sbjct: 336 D 336
>gi|154494034|ref|ZP_02033354.1| hypothetical protein PARMER_03379 [Parabacteroides merdae ATCC
43184]
gi|423722762|ref|ZP_17696915.1| GTP-binding protein HflX [Parabacteroides merdae CL09T00C40]
gi|154086294|gb|EDN85339.1| GTP-binding protein HflX [Parabacteroides merdae ATCC 43184]
gi|409242035|gb|EKN34800.1| GTP-binding protein HflX [Parabacteroides merdae CL09T00C40]
Length = 403
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 168/295 (56%), Gaps = 33/295 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q RN+E+ +LDR LI++IF
Sbjct: 62 TFVGSGKLQEIKEYV----VENEIGLVIFDDELSTKQLRNIEKELQVKILDRTNLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 ARRAQTAHAKTQVELAQYKYMLPRLTRLW-----------------THLERQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ +R IL++ S L + E+ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGETQLETDKRIILDKISKLKRDLVEIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ LS S++F++ +LFATLD ++ V++ + LLSDTVGFI LP +LV++F
Sbjct: 212 VGKSTLMNLLSKSEVFAENKLFATLDTTVRKVIVDNLPFLLSDTVGFIRKLPTELVESFK 271
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV EADLLVHV+D + P EE V + L ++ +E K MI V+NKID
Sbjct: 272 STLDEVREADLLVHVVDISHPTFEEQIEVVNRTLSEIDKTE---KPMIMVFNKID 323
>gi|327402909|ref|YP_004343747.1| GTP-binding protein HflX [Fluviicola taffensis DSM 16823]
gi|327318417|gb|AEA42909.1| GTP-binding protein HflX [Fluviicola taffensis DSM 16823]
Length = 400
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 187/348 (53%), Gaps = 41/348 (11%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI--NGAESKG 149
+EQ Y D F E V+ + K A TF G G +E IK ++ NG E
Sbjct: 27 DEQAHEYLDELEFLAETAGATSVKRFTQKLPMANPRTFVGTGKLEEIKEYVKENGVE--- 83
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
+ + LS Q RN+ER +LDR LI++IF + A T AK Q ELA + Y
Sbjct: 84 ---LVIFDDELSPSQLRNIERELECKILDRNILILDIFASRARTSHAKTQVELAQMQYML 140
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
RL R+ + R GG G + G GE++++ RR I R + L
Sbjct: 141 PRLKRLW-----------------THLERQKGGIG-LRGPGESQIETDRRIIQTRIALLK 182
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
+++E+ + +VQR R + L VA+VGYTN GKST+++ LS S++F++ +LF
Sbjct: 183 EKLKEIDKQMSVQRGNRGQ--------LVRVALVGYTNVGKSTMMNMLSKSEVFAENKLF 234
Query: 330 ATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
ATLD ++ VV+ + LL+DTVGFI LP QLV++F +TL+EV EADLL+HV+D + PN
Sbjct: 235 ATLDTTVRKVVIENLPFLLTDTVGFIRKLPHQLVESFKSTLDEVREADLLIHVVDISHPN 294
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGD 437
E+ V + L ++ + K K MI V+NKID + G ID D
Sbjct: 295 FEDQLNIVNETLAEL---DNKDKPMILVFNKIDAYKHNPG----IDSD 335
>gi|323526572|ref|YP_004228725.1| GTP-binding proten HflX [Burkholderia sp. CCGE1001]
gi|323383574|gb|ADX55665.1| GTP-binding proten HflX [Burkholderia sp. CCGE1001]
Length = 395
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 182/335 (54%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLE+A + V+DR LI
Sbjct: 52 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLEQALNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R+ +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKALKSRLDKLRRQHGTQRRQRSRNQT------MSVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +G+V++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 261
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 318
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E E ++ D+ N SR T + +D
Sbjct: 319 DAVPELAARGEAVERDEYGNISRVFLSARTGQGLD 353
>gi|425744488|ref|ZP_18862544.1| GTP-binding protein HflX [Acinetobacter baumannii WC-323]
gi|425490643|gb|EKU56939.1| GTP-binding protein HflX [Acinetobacter baumannii WC-323]
Length = 447
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 181/317 (57%), Gaps = 37/317 (11%)
Query: 107 ELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQR 166
E+ H+VVQ K F G G V+ I + E+ + + + LS Q+R
Sbjct: 41 EILEHLVVQR-----NKPDPKFFIGSGKVDEIAELVQSLEA----ELVIFDHSLSPAQER 91
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
NLER V+DR GLI++IF A T E KLQ ELA L + +RL+R G
Sbjct: 92 NLERILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GF 141
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
TG E + GG G + G GE++L+ RR I R + L ++ +V++TR RAAR
Sbjct: 142 TGNLE------QQKGGIG-LRGPGESQLETDRRLIRVRITQLKDKLVKVQQTRLQGRAAR 194
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GK 345
++ + T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + G
Sbjct: 195 QK------AAIPTISLVGYTNAGKSTLFNLLAKSDVYAADQLFATLDPTLRRLDWDGIGT 248
Query: 346 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 405
V+L+DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++PN+ E V VL+++G
Sbjct: 249 VVLADTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSPNMPEQIEAVESVLKEIG 308
Query: 406 VSEEKLKNMIEVWNKID 422
++ V+NKID
Sbjct: 309 AD----APILHVYNKID 321
>gi|60680164|ref|YP_210308.1| GTP-binding protein [Bacteroides fragilis NCTC 9343]
gi|265765306|ref|ZP_06093581.1| GTP-binding protein HflX [Bacteroides sp. 2_1_16]
gi|375357007|ref|YP_005109779.1| putative GTP-binding protein [Bacteroides fragilis 638R]
gi|383116925|ref|ZP_09937672.1| GTP-binding protein HflX [Bacteroides sp. 3_2_5]
gi|423259039|ref|ZP_17239962.1| GTP-binding protein HflX [Bacteroides fragilis CL07T00C01]
gi|423263990|ref|ZP_17242993.1| GTP-binding protein HflX [Bacteroides fragilis CL07T12C05]
gi|423269424|ref|ZP_17248396.1| GTP-binding protein HflX [Bacteroides fragilis CL05T00C42]
gi|423273016|ref|ZP_17251963.1| GTP-binding protein HflX [Bacteroides fragilis CL05T12C13]
gi|423282112|ref|ZP_17260997.1| GTP-binding protein HflX [Bacteroides fragilis HMW 615]
gi|60491598|emb|CAH06350.1| putative GTP-binding protein [Bacteroides fragilis NCTC 9343]
gi|251947783|gb|EES88065.1| GTP-binding protein HflX [Bacteroides sp. 3_2_5]
gi|263254690|gb|EEZ26124.1| GTP-binding protein HflX [Bacteroides sp. 2_1_16]
gi|301161688|emb|CBW21228.1| putative GTP-binding protein [Bacteroides fragilis 638R]
gi|387776619|gb|EIK38719.1| GTP-binding protein HflX [Bacteroides fragilis CL07T00C01]
gi|392701218|gb|EIY94378.1| GTP-binding protein HflX [Bacteroides fragilis CL05T00C42]
gi|392706256|gb|EIY99379.1| GTP-binding protein HflX [Bacteroides fragilis CL07T12C05]
gi|392708580|gb|EIZ01687.1| GTP-binding protein HflX [Bacteroides fragilis CL05T12C13]
gi|404582599|gb|EKA87293.1| GTP-binding protein HflX [Bacteroides fragilis HMW 615]
Length = 417
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 181/334 (54%), Gaps = 22/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN-GAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I AE E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIKEYIRIEAEEDRE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ T E S +G G RG GET+L++ RR IL R S L
Sbjct: 146 RLQRL------WTHLERQGGGSGSGKGGSVGLRG----PGETQLEMDRRIILNRMSLLKE 195
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 196 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTMMNLLAKSEVFAENKLFA 247
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 248 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPGF 307
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G K MI ++NKID +
Sbjct: 308 EEQIEVVNKTLADIGGGG---KPMILIFNKIDAY 338
>gi|53711962|ref|YP_097954.1| GTP-binding protein [Bacteroides fragilis YCH46]
gi|52214827|dbj|BAD47420.1| GTP-binding protein [Bacteroides fragilis YCH46]
Length = 417
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 181/334 (54%), Gaps = 22/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN-GAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I AE E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIKEYIRIEAEEDRE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ T E S +G G RG GET+L++ RR IL R S L
Sbjct: 146 RLQRL------WTHLERQGGGSGSGKGGSVGLRG----PGETQLEMDRRIILNRMSLLKE 195
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 196 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTMMNLLAKSEVFAENKLFA 247
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 248 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPGF 307
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G K MI ++NKID +
Sbjct: 308 EEQIEVVNKTLADIGGGG---KPMILIFNKIDAY 338
>gi|423317192|ref|ZP_17295097.1| GTP-binding protein HflX [Bergeyella zoohelcum ATCC 43767]
gi|405581664|gb|EKB55678.1| GTP-binding protein HflX [Bergeyella zoohelcum ATCC 43767]
Length = 403
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 178/318 (55%), Gaps = 36/318 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
+ TF G G +E I+ + + E+ + + LS Q +NLER +LDR LI++
Sbjct: 58 SKTFVGKGKMEEIRDFVK----ENEIGTVIFDDELSPSQLKNLEREMEVKILDRTNLILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T A+ Q ELA Y RL R+ + R GG G
Sbjct: 114 IFAQRAQTSYARTQVELAQYEYLLPRLTRMW-----------------THLERQRGGIG- 155
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GETE++ RR I +R S L +++ + + A QR R + + VA+VGY
Sbjct: 156 MRGPGETEIETDRRIIRDRISLLKEKLKTIDKQMATQRNNRGK--------MVRVALVGY 207
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDA 365
TN GKSTL++ALS S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP QLV++
Sbjct: 208 TNVGKSTLMNALSKSEVFAENKLFATLDTTVRKVVIGNLPFLLTDTVGFIRKLPTQLVES 267
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID--- 422
F +TL+EV EADLL+HV+D + + E+H +V Q+LQ++ K +I ++NKID
Sbjct: 268 FKSTLDEVREADLLIHVVDISHESFEDHIASVNQILQEIDAHR---KPIIMIFNKIDDFS 324
Query: 423 YHDEEMGDVEYIDGDDIS 440
Y ++ D+ I +IS
Sbjct: 325 YEKKDEDDLTPITKKNIS 342
>gi|406035368|ref|ZP_11042732.1| GTPase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 448
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 181/311 (58%), Gaps = 32/311 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
++++ S++ K F G G V+ I + E+ + + + LS Q+RNLE+
Sbjct: 42 ILEHISVQRNKPDPKFFIGSGKVDEIAEQVKDLEA----ELVIFDHSLSPAQERNLEKVL 97
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI++IF A T E KLQ ELA L + +RL+R G TG E
Sbjct: 98 KCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GFTGNLE- 146
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+ GG G + G GE++L+ RR I R + L ++ +V++TR RAAR++
Sbjct: 147 -----QQKGGIG-LRGPGESQLETDRRLIRVRITQLKEKLVKVQQTRLQGRAARQK---- 196
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDT 351
+ T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + G V+L+DT
Sbjct: 197 --AAIPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLDWDGIGTVVLADT 254
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+ +L LV++F ATLEE +EA LL+HV+D ++PN+ E V VL+++G
Sbjct: 255 VGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSPNMTEQIEAVESVLKEIGAD---- 310
Query: 412 KNMIEVWNKID 422
++ V+NKID
Sbjct: 311 APVLHVYNKID 321
>gi|423248654|ref|ZP_17229670.1| GTP-binding protein HflX [Bacteroides fragilis CL03T00C08]
gi|423253603|ref|ZP_17234534.1| GTP-binding protein HflX [Bacteroides fragilis CL03T12C07]
gi|392655232|gb|EIY48875.1| GTP-binding protein HflX [Bacteroides fragilis CL03T12C07]
gi|392657595|gb|EIY51226.1| GTP-binding protein HflX [Bacteroides fragilis CL03T00C08]
Length = 417
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 181/334 (54%), Gaps = 22/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN-GAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I AE E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIKEYIRIEAEEDRE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ T E S +G G RG GET+L++ RR IL R S L
Sbjct: 146 RLQRL------WTHLERQGGGSGSGKGGSVGLRG----PGETQLEMDRRIILNRMSLLKE 195
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 196 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTMMNLLAKSEVFAENKLFA 247
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 248 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPGF 307
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G K MI ++NKID +
Sbjct: 308 EEQIEVVNKTLADIGGGG---KPMILIFNKIDAY 338
>gi|420254112|ref|ZP_14757133.1| GTP-binding protein HflX [Burkholderia sp. BT03]
gi|398050091|gb|EJL42479.1| GTP-binding protein HflX [Burkholderia sp. BT03]
Length = 409
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 184/335 (54%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N ++D + N L+ QQRNLER + V+DR LI
Sbjct: 47 AAMFVGSGKAEELRLACEAN------DIDIVIFNHALAPAQQRNLERTLNRRVVDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L ++E++RR QR AR R+ +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKMLKGRLEKLRRQHGTQRRARARNR------TMSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS--GKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGEEVGQIVVSDTVGFIRELPHQ 256
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ + V VL+++G + ++ ++ V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNDVLREIGA--DTIRQVL-VFNKI 313
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E + ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|390954252|ref|YP_006418010.1| GTP-binding protein HflX [Aequorivita sublithincola DSM 14238]
gi|390420238|gb|AFL80995.1| GTP-binding protein HflX [Aequorivita sublithincola DSM 14238]
Length = 404
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 174/308 (56%), Gaps = 33/308 (10%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K K TF G G ++ +K + + ++ + + LS QQ+N+++ VLDR
Sbjct: 52 KMEKPNPKTFIGTGKLQDVKNFV----EENDVGVVIFDDELSPAQQKNIQKELDCKVLDR 107
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI++IF A T A Q ELA Y RL G T E R
Sbjct: 108 TNLILDIFAQRAQTSNASTQVELAQYQYLLPRLA------GMWTHLE-----------RQ 150
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG G + G GETE++ RR + +R + L +++++ R VQR R L
Sbjct: 151 RGGIG-MRGPGETEIETDRRIVRDRIALLKDKLKKIDRQMGVQRGNRG--------ALVR 201
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLP 359
VA+VGYTN GKSTL++ +S SD+F++ +LFATLD ++ VV+ + LL+DTVGFI LP
Sbjct: 202 VALVGYTNVGKSTLMNVISKSDVFAENKLFATLDTTVRKVVIGNLPFLLTDTVGFIRKLP 261
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
QLV++F +TL+EV EADLL+HV+D + P+ E H +V ++L+++G ++ K I V+N
Sbjct: 262 TQLVESFKSTLDEVREADLLLHVVDISHPSFEHHIDSVDKILEEIGSAD---KPTIMVFN 318
Query: 420 KIDYHDEE 427
KID ++ E
Sbjct: 319 KIDAYEAE 326
>gi|406673992|ref|ZP_11081208.1| GTP-binding protein HflX [Bergeyella zoohelcum CCUG 30536]
gi|405584958|gb|EKB58800.1| GTP-binding protein HflX [Bergeyella zoohelcum CCUG 30536]
Length = 403
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 177/316 (56%), Gaps = 36/316 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E I+ + + E+ + + LS Q +NLER +LDR LI++IF
Sbjct: 60 TFVGKGKMEEIRHFVK----ENEIGTVIFDDELSPSQLKNLEREMEVKILDRTNLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL R+ + R GG G +
Sbjct: 116 AQRAQTSYARTQVELAQYEYLLPRLTRMW-----------------THLERQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR I +R S L +++ + + A QR R + + VA+VGYTN
Sbjct: 158 GPGETEIETDRRIIRDRISLLKEKLKTIDKQMATQRNNRGK--------MVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ALS S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNALSKSEVFAENKLFATLDTTVRKVVIGNLPFLLTDTVGFIRKLPTQLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID---YH 424
+TL+EV EADLL+HV+D + + E+H +V Q+LQ++ K +I ++NKID Y
Sbjct: 270 STLDEVREADLLIHVVDISHESFEDHIASVNQILQEIDAHR---KPIIMIFNKIDDFSYE 326
Query: 425 DEEMGDVEYIDGDDIS 440
++ D+ I +IS
Sbjct: 327 KKDEDDLTPITKKNIS 342
>gi|334145954|ref|YP_004508881.1| GTP-binding protein HflX [Porphyromonas gingivalis TDC60]
gi|333803108|dbj|BAK24315.1| GTP-binding protein HflX [Porphyromonas gingivalis TDC60]
Length = 406
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 168/295 (56%), Gaps = 32/295 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ I+ ++ + E+ + + LS Q RN+E+ +LDR GLI++IF
Sbjct: 62 TFVGKGKLDEIRAYVQ----ENEIGMVVFDDELSPKQLRNIEKELQTKILDRTGLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
T AK Q ELA Y RL G T E R GG G +
Sbjct: 118 ARRVQTAHAKTQVELAQYQYMLPRLT------GLWTHLE-----------RQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+ RR +L++ + L ++ ++ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGEKQLETDRRIVLDKIARLKEELRDIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ LS S++F++ +LFATLD ++ V++ + LLSDTVGFI LP QLV++F
Sbjct: 212 VGKSTLMNVLSKSEVFAENKLFATLDTTVRKVIIDNLPFLLSDTVGFIRKLPTQLVESFK 271
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV EADLLVHV+D + P EE V Q L ++ EE K M+ ++NKID
Sbjct: 272 STLDEVREADLLVHVVDMSHPAFEEQIEVVNQTLAEITAGEE--KPMLLLFNKID 324
>gi|307729255|ref|YP_003906479.1| GTP-binding proten HflX [Burkholderia sp. CCGE1003]
gi|307583790|gb|ADN57188.1| GTP-binding proten HflX [Burkholderia sp. CCGE1003]
Length = 390
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 182/335 (54%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLE+A + V+DR LI
Sbjct: 47 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLEQALNRRVVDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R+ +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKALKSRLDKLRRQHGTQRRQRSRNQ------TMSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +G+V++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAANQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 256
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 313
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E E ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGEAVERDEYGNISRVFLSARTGQGLD 348
>gi|294651533|ref|ZP_06728842.1| GTP-binding family protein [Acinetobacter haemolyticus ATCC 19194]
gi|292822556|gb|EFF81450.1| GTP-binding family protein [Acinetobacter haemolyticus ATCC 19194]
Length = 445
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 182/313 (58%), Gaps = 36/313 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ S++ K F G G VE I AE LDA + + LS Q+RNLE+
Sbjct: 42 ILEHVSVQRQKPDPKFFIGSGKVEEI------AELVRALDAELVIFDHSLSPAQERNLEK 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G TG
Sbjct: 96 VLKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GFTGNL 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GE++L+ RR I R + L ++ +V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGESQLETDRRLIRVRITQLKDKLIKVQQTRLQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLS 349
+ T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + G V+L+
Sbjct: 197 ----AAIPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLA 252
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++PN+ E V VL+++G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVVDSSSPNMPEQIEAVESVLKEIGAD-- 310
Query: 410 KLKNMIEVWNKID 422
++ V+NKID
Sbjct: 311 --APILHVYNKID 321
>gi|226953962|ref|ZP_03824426.1| GTP-binding protein [Acinetobacter sp. ATCC 27244]
gi|226835316|gb|EEH67699.1| GTP-binding protein [Acinetobacter sp. ATCC 27244]
Length = 445
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 182/313 (58%), Gaps = 36/313 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ S++ K F G G VE I AE LDA + + LS Q+RNLE+
Sbjct: 42 ILEHVSVQRQKPDPKFFIGSGKVEEI------AELVRALDAELVIFDHSLSPAQERNLEK 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G TG
Sbjct: 96 VLKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GFTGNL 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GE++L+ RR I R + L ++ +V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGESQLETDRRLIRVRITQLKDKLIKVQQTRLQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLS 349
+ T+++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + G V+L+
Sbjct: 197 ----AAIPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLA 252
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++PN+ E V VL+++G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVVDSSSPNMPEQIEAVESVLKEIGAD-- 310
Query: 410 KLKNMIEVWNKID 422
++ V+NKID
Sbjct: 311 --APILHVYNKID 321
>gi|152986375|ref|YP_001350991.1| GTP-binding proten HflX [Pseudomonas aeruginosa PA7]
gi|150961533|gb|ABR83558.1| GTP-binding proten HflX [Pseudomonas aeruginosa PA7]
Length = 433
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/354 (38%), Positives = 194/354 (54%), Gaps = 39/354 (11%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ + A G G VE + + AE+ ++ + N L+ Q+RNLERA+ VL
Sbjct: 47 SVSRHQPSAKYLIGSGKVEELHDLVK-AEN---VELVIFNHTLTPSQERNLERAFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +D +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKR---AD---I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
V++VGYTNAGKSTL +AL+ S++++ +LFATLDP L+ + L G V+L+DTVGFI
Sbjct: 199 PAVSLVGYTNAGKSTLFNALTSSEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFIR 258
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV+AF ATLEE ADLL+HV+D P + VL VL ++G +E M+E
Sbjct: 259 HLPHKLVEAFRATLEESSNADLLLHVIDAHEPERDAQIEQVLAVLGEIGANE---LPMLE 315
Query: 417 VWNKIDYHDEEMGDVE-YIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDD 467
V+NK+D + VE +I DD R T E +D+ + I G+D
Sbjct: 316 VYNKVDL----LPSVEPHIQRDDAGKPVRVWLSAQTGEGLDLLRQAIAELLGED 365
>gi|148544835|ref|YP_001272205.1| HSR1-like GTP-binding protein [Lactobacillus reuteri DSM 20016]
gi|184154175|ref|YP_001842516.1| GTPases [Lactobacillus reuteri JCM 1112]
gi|227363974|ref|ZP_03848074.1| GTP-binding protein HflX [Lactobacillus reuteri MM2-3]
gi|325683179|ref|ZP_08162695.1| GTP-binding protein HflX [Lactobacillus reuteri MM4-1A]
gi|148531869|gb|ABQ83868.1| GTP-binding protein, HSR1-related [Lactobacillus reuteri DSM 20016]
gi|183225519|dbj|BAG26036.1| GTPases [Lactobacillus reuteri JCM 1112]
gi|227070896|gb|EEI09219.1| GTP-binding protein HflX [Lactobacillus reuteri MM2-3]
gi|324977529|gb|EGC14480.1| GTP-binding protein HflX [Lactobacillus reuteri MM4-1A]
Length = 425
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 194/384 (50%), Gaps = 45/384 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE I+ + I N LS Q RNLE G +LDR LI+EIF
Sbjct: 56 TYFGKGKVEEIR----DVADANHVPTIITNDELSPSQLRNLEEGTGCRILDRTALILEIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL +T +E + + GG GF +
Sbjct: 112 ATRAQSKEAKLQVQIAELQYRLPRL-------------QTSASERLDQQT--GGGSGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I + SHL ++ + ++ +R R + + T A+VGYT
Sbjct: 157 RGAGETKLEMDRRTIQHQISHLRQELAAIDKSEQTKRKQRAK------SAIPTAALVGYT 210
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
NAGKST+++ L + +F LFATLD ++ + LP K LLSDTVGF+S L
Sbjct: 211 NAGKSTIMNGLVRRYGAAEEKTVFEKNMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKL 270
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P LV++F +TL E ADLL+ V+D + P+ +E T + L+Q+G+++ MI V+
Sbjct: 271 PTHLVESFKSTLAEAANADLLIQVIDYSDPHYKEMMETTNETLKQIGINDIP---MINVF 327
Query: 419 NKIDYHDEEMGDVEYIDGDDISNFSRAEDK--DTTSEPVDVECIDNYGGDD--ADNNDGF 474
NK D + E +E GDD S +D D + + +Y DG
Sbjct: 328 NKADKTEIEFPILE---GDDQVVISAKQDASLDLLVDVIKKRLFKDYVTTTLLIPFTDGH 384
Query: 475 VSEDLGESMNKNHNDY-SDGWLLS 497
V L E N Y SDG LL+
Sbjct: 385 VVSYLNEHTNILDTTYESDGTLLT 408
>gi|93005226|ref|YP_579663.1| HSR1-like GTP-binding protein [Psychrobacter cryohalolentis K5]
gi|92392904|gb|ABE74179.1| GTP-binding protein, HSR1-related protein [Psychrobacter
cryohalolentis K5]
Length = 489
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/307 (41%), Positives = 178/307 (57%), Gaps = 35/307 (11%)
Query: 123 KARADT--FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRV 180
+AR D F G G E I + ++ D + N LS Q+RN+E VLDR
Sbjct: 51 RARPDARYFVGSGKAEEIAELVREHDA----DIVLFNHSLSPSQERNIEALVQCRVLDRT 106
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLI++IF A T E KLQ ELA L + +RLVR G T R
Sbjct: 107 GLILDIFAQRARTYEGKLQVELAQLNHLSTRLVR----------GWTHLE-------RQK 149
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG G + G GET+L+ RR + R L S+IE+VR+TRA RA R++ SD + T+
Sbjct: 150 GGIG-LRGPGETQLETDRRLLQVRVMQLKSRIEKVRQTRAQGRARRQK---SD---VPTI 202
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLP 359
++VGYTNAGKSTL + L D ++++ +LFATLDP L+ + G+V+L DTVGF+ LP
Sbjct: 203 SLVGYTNAGKSTLFNRLVDENIYAADKLFATLDPTLRRLDWQGVGRVVLVDTVGFVRHLP 262
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
+LV++FHATLEE +EADLL+HV+D ++ ++ E V VL ++ + ++ V+N
Sbjct: 263 HELVESFHATLEETLEADLLLHVIDSSSEDMHEQIQAVKDVLAEI----DNDVPVLNVYN 318
Query: 420 KIDYHDE 426
KID DE
Sbjct: 319 KIDVTDE 325
>gi|261880653|ref|ZP_06007080.1| GTP-binding protein HflX [Prevotella bergensis DSM 17361]
gi|270332606|gb|EFA43392.1| GTP-binding protein HflX [Prevotella bergensis DSM 17361]
Length = 411
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 196/378 (51%), Gaps = 26/378 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGELDAIFV 156
Y D F + V V+ + K G T+ G G + IK +I E ++ E+ +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQKVGGVNQTTYVGKGKLAEIKQYIQEEEDNEREVGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSARQLRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRLW 151
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
R G G + G GET+L++ RR IL+R + L ++ ++
Sbjct: 152 THLER-------------QGGGSGNGSVGLRGPGETQLEMDRRIILQRITLLKQRLVDID 198
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ +A QR R R L VA+VGYTN GKST+++ LS SD+F++ +LFATLD +
Sbjct: 199 KQKATQRKNRGR--------LIRVALVGYTNVGKSTIMNLLSKSDVFAENKLFATLDTTV 250
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE +
Sbjct: 251 RKVVIGNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQISV 310
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
V + L+ +G S+ K I V+NK D + + + + + N S + + T +D
Sbjct: 311 VNETLKDLGCSD---KPQIVVFNKTDNYQWVEKEPDDLTPETKENLSLDDLQKTWMAKLD 367
Query: 457 VECIDNYGGDDADNNDGF 474
C+ + DN D F
Sbjct: 368 ENCL-FISAKNKDNIDEF 384
>gi|429749155|ref|ZP_19282295.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 332 str.
F0381]
gi|429168924|gb|EKY10725.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 332 str.
F0381]
Length = 403
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 171/301 (56%), Gaps = 33/301 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E ++ ++ + E+ + + L+ QQ+N+E +LDR GLI++IF
Sbjct: 60 TFIGTGKMEEVQQYV----EENEVGTVIFDDELTPAQQKNIEHILKVKILDRTGLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T ++ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ + + A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLSAIDKQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S SD+F++ +LFATLD ++ VV+ + LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNVISKSDVFAENKLFATLDTTVRKVVIENLPFLLSDTVGFIRKLPTQLIESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV EADLL+HV+D + PN E+H +V Q+L ++ E K I V+NKID + E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEDHIHSVNQILAEI---ESANKPTIMVFNKIDAYTHE 326
Query: 428 M 428
+
Sbjct: 327 V 327
>gi|88810493|ref|ZP_01125750.1| GTP-binding protein [Nitrococcus mobilis Nb-231]
gi|88792123|gb|EAR23233.1| GTP-binding protein [Nitrococcus mobilis Nb-231]
Length = 435
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 171/295 (57%), Gaps = 32/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V + I ++ + + +N LS +Q+RNLE+A+G VLDR GLI++IF
Sbjct: 64 FIGKGKVGELAARIRETDA----NLVLINHGLSAVQERNLEQAFGARVLDRTGLILDIFA 119
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + SRLVR G + + R GG G + G
Sbjct: 120 LRARSHEGKLQVELAQLRHIASRLVR-------------GWSHL----ERQKGGIG-LRG 161
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+L RR + +R L ++ +VRR R R ARR+ R TV+ VGYTNA
Sbjct: 162 PGETQLELDRRLLGQRIKQLEKRLTKVRRQREQGRQARRK------REFVTVSFVGYTNA 215
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFH 367
GKS L + L++S ++ LFATLD L+ + LP S + +++DTVGFI +LP QL+ AF
Sbjct: 216 GKSALFNRLTESHVYIADLLFATLDTTLRRIELPGSEQAIIADTVGFIRELPHQLIAAFR 275
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TLEEV +ADLL+HV+D P E+ R V +VL +G + + ++NK+D
Sbjct: 276 STLEEVAQADLLLHVIDIADPLREQRRWEVERVLSDIGAGD---IPALLIFNKLD 327
>gi|336408175|ref|ZP_08588669.1| GTP-binding protein HflX [Bacteroides sp. 2_1_56FAA]
gi|335939475|gb|EGN01349.1| GTP-binding protein HflX [Bacteroides sp. 2_1_56FAA]
Length = 417
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 181/334 (54%), Gaps = 22/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN-GAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E IK +I AE E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIKEYIRIEAEEDRE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ T E S +G G RG GET+L++ RR IL R S L
Sbjct: 146 RLQRL------WTHLERQGGGSGSGKGGSVGLRG----PGETQLEMDRRIILNRMSLLKE 195
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 196 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTMMNLLAKSEVFAENKLFA 247
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 248 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPGF 307
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G K MI ++NKID +
Sbjct: 308 EEQIEVVNKTLADIGGGG---KPMILIFNKIDAY 338
>gi|399909454|ref|ZP_10778006.1| GTP-binding protein HflX [Halomonas sp. KM-1]
Length = 425
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 173/301 (57%), Gaps = 36/301 (11%)
Query: 128 TFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
TF G G +E ++ ++GAE + N LS Q+RNLER VLDR GLI++
Sbjct: 44 TFIGSGKLEELREALQVHGAE------LVIFNHGLSPSQERNLERELKCRVLDRTGLILD 97
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L Y +RLVR G T R GG G
Sbjct: 98 IFAQRARTHEGKLQVELAQLEYMSTRLVR----------GWTHLE-------RQKGGIG- 139
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++++VR R+ R AR R + +V++VGY
Sbjct: 140 LRGPGETQLETDRRLLRARIKAIHKRLDKVRSQRSQNRRARERAE------IPSVSLVGY 193
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSV-VLPSGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL+++ +++ +LFATLDP L+ + V G V+L+DTVGFI LP +LV+
Sbjct: 194 TNAGKSTLFNALTEAKVYAADQLFATLDPTLRRLEVGDVGPVVLADTVGFIRHLPHKLVE 253
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATL+E EA LLVHV+D P+ E + V +VL ++G E M++V NKID
Sbjct: 254 AFQATLQEATEASLLVHVIDAADPDRELNVEQVEKVLDEIGALE---VPMLKVMNKIDLL 310
Query: 425 D 425
D
Sbjct: 311 D 311
>gi|374704693|ref|ZP_09711563.1| GTP-binding protein HflX [Pseudomonas sp. S9]
Length = 433
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 177/306 (57%), Gaps = 32/306 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ S + A G G VE ++ + AE+ D + N +L+ Q+RNLERA+ VL
Sbjct: 47 SVPSNRLTAKYLIGSGKVEELRDQVKSAEA----DLVIFNHVLTPSQERNLERAFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLDHLSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++ +VR R R R+R +D +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQKLNKVRSQREQARRGRQR---AD---I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
+V++VGYTNAGKSTL +A+++S++++ +LFATLDP L+ + L G ++L+DTVGFI
Sbjct: 199 PSVSLVGYTNAGKSTLFNAVTESEVYAADQLFATLDPTLRRLDLNDFGPIVLADTVGFIR 258
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV+AF ATLEE +DLL+HV+D P V+ VL ++G E ++E
Sbjct: 259 HLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMAQIEQVMAVLTEIGAHE---LPILE 315
Query: 417 VWNKID 422
V+NK+D
Sbjct: 316 VYNKLD 321
>gi|340349247|ref|ZP_08672268.1| GTP-binding protein HflX [Prevotella nigrescens ATCC 33563]
gi|339612334|gb|EGQ17146.1| GTP-binding protein HflX [Prevotella nigrescens ATCC 33563]
Length = 420
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 201/384 (52%), Gaps = 34/384 (8%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F V V+ + + G ++ G G + IK +I E + E + +
Sbjct: 32 YLDELEFLAHTAGAVTVKRFTQRVGGPNMTSYVGKGKLAEIKEYIKTKEDEDEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQLRNIENELQVKILDRTSLILDIFAMRAQTSNAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMTLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR RRR L VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKITQRKNRRR--------LIRVALVGYTNVGKSTIMNMLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VVL + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVLLNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIQV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKID-YHDEEMGDVEYIDGDDIS-----NFSRAEDKDT 450
V + L+ + +E+ +MI ++NKID Y EE D DD++ N S E K T
Sbjct: 315 VTETLKDLECAEK--PSMI-IFNKIDNYTWEEKED------DDLTPMTKKNVSLEELKRT 365
Query: 451 TSEPVDVECIDNYGGDDADNNDGF 474
++ +C+ + +N D F
Sbjct: 366 WMAKLNDDCL-FISAKEKENIDEF 388
>gi|325270195|ref|ZP_08136802.1| GTP-binding protein HflX [Prevotella multiformis DSM 16608]
gi|324987496|gb|EGC19472.1| GTP-binding protein HflX [Prevotella multiformis DSM 16608]
Length = 415
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 182/329 (55%), Gaps = 22/329 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + A T+ G G +E IK +I E + + + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRLNGPSAVTYVGKGKLEEIKEYIQQKEDEDDPVGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E G +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIEHELGVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQRLVEIE 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ ++ QR R R L VA+VGYTN GKST ++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKSTQRKNRGR--------LIRVALVGYTNVGKSTTMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+H++D + P+ EE
Sbjct: 255 RKVVVENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDFEEQIQV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
V + L +G +++ +MI V+NKID YH
Sbjct: 315 VNKTLADLGCADK--PSMI-VFNKIDNYH 340
>gi|407714019|ref|YP_006834584.1| GTP-binding protein HflX [Burkholderia phenoliruptrix BR3459a]
gi|407236203|gb|AFT86402.1| GTP-binding protein HflX [Burkholderia phenoliruptrix BR3459a]
Length = 390
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 182/335 (54%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLE+A + V+DR LI
Sbjct: 47 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLEQALNRRVVDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R+ +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKALKSRLDKLRRQHGTQRRQRSRNQT------MSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +G+V++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 256
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 313
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E E ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGEAVERDEYGNISRVFLSARTGQGLD 348
>gi|334129948|ref|ZP_08503751.1| GTP-binding protein HflX [Methyloversatilis universalis FAM5]
gi|333444984|gb|EGK72927.1| GTP-binding protein HflX [Methyloversatilis universalis FAM5]
Length = 421
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 164/296 (55%), Gaps = 32/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G V I N GE D + N LS QQRNLERA + V+DR LI++IF
Sbjct: 56 TFAGKGKVAEILDLANA----GEADIVLFNHELSPAQQRNLERALQRRVIDRNALILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR T E R GG G +
Sbjct: 112 ALRARSHEGKLQVELAQLEHLSTRLVR------GWTHLE-----------RQKGGIG-LR 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + R L ++ +V R R V+R +R R R VA+VGYTN
Sbjct: 154 GPGETQLETDRRLLGVRVKALKERLAKVERQRGVRRKSRER------RATPVVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL +AL+ + ++ +LFATLD + + L G+V+LSDTVGFI DLP LV AF
Sbjct: 208 AGKSTLFNALTKAGTYAADQLFATLDTTSRQLYLGEFGQVVLSDTVGFIRDLPHTLVAAF 267
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
HATLEE ADLL+HV+D +AP+ + V +VL +VG I V NKID
Sbjct: 268 HATLEETAGADLLLHVIDASAPDRDAQIEAVDRVLAEVGADAVP---QIRVLNKID 320
>gi|421866989|ref|ZP_16298651.1| GTP-binding protein HflX [Burkholderia cenocepacia H111]
gi|358073153|emb|CCE49529.1| GTP-binding protein HflX [Burkholderia cenocepacia H111]
Length = 390
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 182/333 (54%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 47 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 258
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G E ++ ++ V+NKID
Sbjct: 259 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--ETIRQVL-VFNKIDA 315
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 316 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|312114083|ref|YP_004011679.1| GTP-binding proten HflX [Rhodomicrobium vannielii ATCC 17100]
gi|311219212|gb|ADP70580.1| GTP-binding proten HflX [Rhodomicrobium vannielii ATCC 17100]
Length = 462
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 149/374 (39%), Positives = 196/374 (52%), Gaps = 39/374 (10%)
Query: 57 DPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQN 116
D D R ++ P LK + Q AL LEE G D V +
Sbjct: 25 DDDGATRAIVIVPVLKGQSGPQGAFALALSSEERLEEAV-GLAIAIGLD-------VAFS 76
Query: 117 PSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPV 176
++ + + G G VE I I AE + V+ L+ IQQRNLE+AW V
Sbjct: 77 GTVPLAQIKPAALLGTGKVEEIGA-IIAAEG---VSVAIVDHPLTPIQQRNLEKAWNAKV 132
Query: 177 LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSAR 236
LDR GLI+EIF A +KE +LQ ELA L Y+KSRLVR T E
Sbjct: 133 LDRTGLILEIFAERARSKEGRLQVELARLTYQKSRLVR------SWTHLE---------- 176
Query: 237 GRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRG 296
R GG GF+ G GET+++ RR I ER I+ ++ AV RR H
Sbjct: 177 -RQRGGFGFLGGPGETQIEADRRAIGER-------IDVIKNDLAVSERTRRLHRKRRKET 228
Query: 297 -LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGF 354
V++VGYTNAGKSTL +ALS + + + LFATLDP L+ V G +LSDTVGF
Sbjct: 229 DQQIVSLVGYTNAGKSTLFNALSGAGVLAKDMLFATLDPTLRRVEFADGGAFILSDTVGF 288
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGV-SEEKLKN 413
ISDLP QL+ AFHATLEE++EADL++HV D + + E + V +VL ++G+ + +
Sbjct: 289 ISDLPTQLIVAFHATLEEILEADLILHVRDIASASSEAQKIEVERVLAEIGIDAAAQASR 348
Query: 414 MIEVWNKIDYHDEE 427
+IEVWNK D E+
Sbjct: 349 VIEVWNKSDLLSED 362
>gi|117919051|ref|YP_868243.1| HSR1-like GTP-binding protein [Shewanella sp. ANA-3]
gi|117611383|gb|ABK46837.1| GTP-binding protein, HSR1-related [Shewanella sp. ANA-3]
Length = 435
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 165/284 (58%), Gaps = 27/284 (9%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
E + + N LS Q+RNLE+ VLDR LI++IF A T E KLQ ELA L +
Sbjct: 74 EANVVIFNHALSPAQERNLEQVCQCRVLDRTTLILDIFAQRARTHEGKLQVELAQLRHMS 133
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
+RLVR G T R GG G + G GET+L+ RR + R ++
Sbjct: 134 TRLVR----------GWTHLE-------RQKGGIG-LRGPGETQLETDRRLLRGRIKNIN 175
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
++E V + R R AR+R SD + TV++VGYTNAGKSTL +AL+ SD+++ +LF
Sbjct: 176 KRLERVDKQREQSRRARKR---SD---MPTVSLVGYTNAGKSTLFNALTSSDVYAADQLF 229
Query: 330 ATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
ATLDP L+ + LP G V+L+DTVGFI LP LV AF ATL+E +ADLL+H++DC N
Sbjct: 230 ATLDPTLRKLDLPDGAVILADTVGFIRHLPHDLVAAFKATLQETRQADLLLHIVDCADEN 289
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEY 433
+ ++ V VL+ + +E + V NKID ++ +EY
Sbjct: 290 MADNFEQVQNVLEDIDAAEVM---QLVVCNKIDLLEDVTPRIEY 330
>gi|238027077|ref|YP_002911308.1| GTP-binding proten HflX [Burkholderia glumae BGR1]
gi|237876271|gb|ACR28604.1| GTP-binding proten HflX [Burkholderia glumae BGR1]
Length = 398
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/323 (39%), Positives = 181/323 (56%), Gaps = 37/323 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N E+D + N L+ QQRNLER + V+DR LI
Sbjct: 52 AAMFIGSGKAEELRLACDAN------EIDIVIFNHPLAPAQQRNLERTLNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R+ R + +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHNTQRRQRERN-----RTM-SVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 261
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLHEIGA--DAIRQVL-VFNKI 318
Query: 422 DYHDEEMGDVEYIDGDDISNFSR 444
D E + ++ D+ N SR
Sbjct: 319 DAVPELAARGDAVERDEYGNISR 341
>gi|407716810|ref|YP_006838090.1| GTP-binding subunit of protease specific for phage lambda cII
repressor [Cycloclasticus sp. P1]
gi|407257146|gb|AFT67587.1| GTP-binding subunit of protease specific for phage lambda cII
repressor [Cycloclasticus sp. P1]
Length = 419
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 174/298 (58%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G ++ +K ++ + D + N LS QQRNLE+ VLDR LI++
Sbjct: 56 ARFFVGKGKLDEVKHQLHETCA----DIVLFNHTLSPSQQRNLEKELEVRVLDRTNLILD 111
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L + +RL+R G T R GG G
Sbjct: 112 IFAQRAQSFEGKLQVELAQLQHLSTRLIR----------GWTHLE-------RQKGGIG- 153
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I +R + +++ +V + R R +R+R + TV++VGY
Sbjct: 154 LRGPGETQLETDRRLIGQRIRQIKTRLTKVNKQRDQGRRSRQR------ADVPTVSLVGY 207
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L++S +++ +LFATLDP L+ V LP G+++L+DTVGFI +LP +LV
Sbjct: 208 TNAGKSTLFNVLTNSAIYAADQLFATLDPTLRQVKLPDYGELVLADTVGFIQNLPHELVA 267
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF +TL+E +EADLL+HV+D ++PN +E V VL+++G + V+NKID
Sbjct: 268 AFRSTLQETIEADLLLHVVDASSPNRQEQIHEVNSVLKEIGADNIP---QVMVYNKID 322
>gi|78485431|ref|YP_391356.1| small GTP-binding protein domain-containing protein [Thiomicrospira
crunogena XCL-2]
gi|78363717|gb|ABB41682.1| Conserved hypothetical protein with a GTPase domain [Thiomicrospira
crunogena XCL-2]
Length = 436
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 172/295 (58%), Gaps = 33/295 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E IK + ++ D + VN LS Q+RNL + VLDRVGLI++IF
Sbjct: 61 FIGKGKAEEIKAAVETHQA----DVVIVNHALSPAQERNLSQFLDCQVLDRVGLILDIFA 116
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L +RLV+ G + + R G G RG
Sbjct: 117 QRARSHEGKLQVELAQLKRMSTRLVK-------------GWSHL--DRQGGIGARG---- 157
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + + L ++IE+VR+ R++ R +R++ SD L T+ ++GYTNA
Sbjct: 158 PGETQLETDRRLVQGKIKQLEARIEKVRQQRSLGRRSRKK---SD---LPTITIIGYTNA 211
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + ++ + ++++ RLFATLD L+ V LP +G V+ +DTVGFI +P LV AF
Sbjct: 212 GKSTLFNQMTRASVYAEDRLFATLDSTLRKVHLPGAGPVIFADTVGFIRHIPHDLVAAFR 271
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TLEE EADLL+H++D P+ E T V +V+++VG + + V+NKID
Sbjct: 272 STLEETSEADLLIHLVDAADPHRAEKMTDVEEVIKEVGAED---VPQLTVFNKID 323
>gi|372222509|ref|ZP_09500930.1| GTP-binding protein HflX [Mesoflavibacter zeaxanthinifaciens S86]
Length = 409
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 175/312 (56%), Gaps = 38/312 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E + ++ + ++ ++ + L+ QQ N+E+ V+DR LI++IF
Sbjct: 60 TYIGTGKMEEVHAYV----KENDISSVIFDDELTPAQQNNIEKLLKCKVMDRTSLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAKTSYARTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ ++ R QR R L VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLSKIDRQMETQRGNRG--------ALVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S SD+F++ +LFATLD ++ VV+ + LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNVISKSDVFAENKLFATLDTTVRKVVIGNLPFLLSDTVGFIRKLPTQLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV EADLL+HV+D + PN EEH +V Q+L ++ ++ K I V+NKID + E
Sbjct: 270 STLDEVREADLLLHVVDISHPNFEEHIASVNQILDEIDSTD---KETIMVFNKIDQYVPE 326
Query: 428 MGDVEYIDGDDI 439
+ I+ DD+
Sbjct: 327 V-----IEEDDL 333
>gi|119502793|ref|ZP_01624878.1| probable GTP-binding protein [marine gamma proteobacterium
HTCC2080]
gi|119461139|gb|EAW42229.1| probable GTP-binding protein [marine gamma proteobacterium
HTCC2080]
Length = 405
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/314 (41%), Positives = 181/314 (57%), Gaps = 35/314 (11%)
Query: 118 SLKSGKARADT---FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGK 174
+L +G R+ T F G G +E I+ I AE+ D + N LS Q+RNLE A
Sbjct: 31 ALVTGHRRSPTAKFFVGTGKLEEIRI-IKEAENA---DLVVFNHPLSPSQERNLEAALEC 86
Query: 175 PVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVS 234
V+ R GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 87 RVIARTGLILDIFAQRARTHEGKLQVELAQLQHMSTRLVR----------GWTHLE---- 132
Query: 235 ARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDG 294
R GG G + G GET+L+ RR + R S + +++ +V+ RA R AR+R
Sbjct: 133 ---RQKGGIG-LRGPGETQLETDRRLLRVRISAIETRLGKVKAQRAQSRRARKRAE---- 184
Query: 295 RGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVG 353
L V++VGYTNAGKSTL + + +D+++ +LFATLDP L+ V +P G V+L+DTVG
Sbjct: 185 --LPLVSIVGYTNAGKSTLFNRYASADVYAADQLFATLDPTLRRVEIPHLGDVVLADTVG 242
Query: 354 FISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN 413
FISDLP L+DAF ATLEE + ADLL+HV+D +A E + V VL ++G +
Sbjct: 243 FISDLPHTLIDAFKATLEETLNADLLIHVIDVSADQREYWMSEVDLVLSEIGAGDVP--- 299
Query: 414 MIEVWNKIDYHDEE 427
M+ V+NK+D +++
Sbjct: 300 MLCVFNKLDLLEQQ 313
>gi|301615114|ref|XP_002937028.1| PREDICTED: putative GTP-binding protein 6-like [Xenopus (Silurana)
tropicalis]
Length = 530
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 179/321 (55%), Gaps = 29/321 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQR 166
LP VV + + + FG G +T+ I G ++ A+F+N LS + ++
Sbjct: 144 LPNWSVVNTLIMSTKSPDSKLIFGKGNFQTLTDVIKGHP---QITAVFLNVERLSSLTEK 200
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
+E AWG V DR +++ IF +AHTKEAKLQ LA L +S L
Sbjct: 201 EMEEAWGVKVFDRYTVVLNIFRFNAHTKEAKLQIALAELPLLRSNL-------------- 246
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
+ E +G G R +I G+GET L++Q+R + ER + + +E+V++ R + R R
Sbjct: 247 --KNETAHMDQQGGGSR-YIMGSGETFLEVQQRLLKEREIKIKNALEKVKKKRNLLRTQR 303
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPS-G 344
RR R ++V+GYTN+GK+TL+ AL+ D L +LFATLD + +LP
Sbjct: 304 RR------REFPIISVLGYTNSGKTTLIKALTGDEGLQPRDQLFATLDVTSHAGLLPCRM 357
Query: 345 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 404
V+ DT+GF+S LP L+++F ATLE+VV +DLL+HV D + P + + +VL VL+ +
Sbjct: 358 PVIYVDTIGFLSQLPHNLIESFSATLEDVVHSDLLIHVRDISHPETLKQKASVLSVLKNL 417
Query: 405 GVSEEKLKNMIEVWNKIDYHD 425
+ ++ L MIEV NKID D
Sbjct: 418 RLPQQLLDTMIEVHNKIDLVD 438
>gi|377832202|ref|ZP_09815166.1| GTP-binding protein HflX [Lactobacillus mucosae LM1]
gi|377554209|gb|EHT15924.1| GTP-binding protein HflX [Lactobacillus mucosae LM1]
Length = 409
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 175/304 (57%), Gaps = 37/304 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE ++ H+ AE E+ + N L+ Q +NL G +LDR LI+EIF
Sbjct: 39 TYFGSGKVEELR-HLAEAE---EVATVIANDELTPSQLQNLADQTGVRILDRTALILEIF 94
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A ++EAK+Q E+A L Y+ RL + RL +TG GG GF +
Sbjct: 95 AKRAQSREAKIQVEIAQLQYQLPRLQT--AANQRLD-QQTG------------GGSGFTN 139
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I + SHL ++++E+ ++ V+RA R + SD T A+VGYT
Sbjct: 140 RGAGETKLEMNRRTINHKISHLRAELKEIAKSEDVKRAKREK---SDT---PTAALVGYT 193
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
NAGKST+++ L + +F LFATLD ++ + LP K LLSDTVGF+S L
Sbjct: 194 NAGKSTIMNQLVSRFGVSEEKQVFEKNMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKL 253
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P L++AF +TL E ADLL+ V+D + PN E T + L+Q+G+ E + M+ V+
Sbjct: 254 PTHLIEAFKSTLAEAASADLLIQVIDYSDPNYEAMMRTTEKTLKQIGI--ENIP-MLYVF 310
Query: 419 NKID 422
NK D
Sbjct: 311 NKAD 314
>gi|255319634|ref|ZP_05360844.1| GTP-binding protein HflX [Acinetobacter radioresistens SK82]
gi|255303318|gb|EET82525.1| GTP-binding protein HflX [Acinetobacter radioresistens SK82]
Length = 446
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 172/299 (57%), Gaps = 33/299 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I + E +D + N LS Q+RNLER V+DR GLI++IF
Sbjct: 58 FIGSGKAEEIAELVKTEE----IDLVIFNHSLSPAQERNLERVMQCRVIDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLEHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L+ RR + R L ++E+VR+TR RAAR++ + TV++VGYTNA
Sbjct: 156 PGESQLETDRRLLRIRMGQLKDKLEKVRQTRMQGRAARQK------AAIPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+++++++ +LFATLDP L+ + G ++L+DTVGF+ +LP LV++F
Sbjct: 210 GKSTLFNILANTEVYAANQLFATLDPTLRRLEWDGIGSLVLADTVGFVRNLPHSLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEE +EA LL+HV+D + P++ E V VL+++G L+ V+NKID E
Sbjct: 270 ATLEETLEATLLLHVIDSSTPDMMEQIDAVESVLKEIGADVPVLR----VYNKIDVSGE 324
>gi|395244510|ref|ZP_10421474.1| GTP-binding protein HflX [Lactobacillus hominis CRBIP 24.179]
gi|394483157|emb|CCI82482.1| GTP-binding protein HflX [Lactobacillus hominis CRBIP 24.179]
Length = 426
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 186/337 (55%), Gaps = 39/337 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G + IK G ++K A+ +N L+ Q RNLE V+DR LI+E
Sbjct: 54 AGTYFGVGKINQIKAMAQGLKAK----ALVINDELTPTQIRNLESMTKLKVVDRTELILE 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF+ A TK+AKLQ +LA L Y+ L R+ + L RGSG
Sbjct: 110 IFSNRAKTKQAKLQVQLARLQYE---LPRLHPSENSLDQQRGSGGASGGFANRGSG---- 162
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
ET+L+L RR I ++ S + +++E+ + V ++ARR + L VA+VGY
Sbjct: 163 -----ETKLELNRRTIGKQISAIKKELKEISKQEDV-KSARRNNSR-----LPQVALVGY 211
Query: 306 TNAGKSTLVSAL-----SDSD---LFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
TNAGKST ++ L DSD +F LFATLD ++ + LP + +LSDTVGFIS
Sbjct: 212 TNAGKSTTLNELLKVFSEDSDKKQVFEKNMLFATLDTSVRRIDLPDDRSFILSDTVGFIS 271
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP L+++F ATL+E +ADLLV+V+D + PN+ + T +VLQ++G++ MI
Sbjct: 272 KLPHNLIESFKATLQEAKQADLLVNVVDSSDPNMVQMTKTTQKVLQEIGITNVP---MIT 328
Query: 417 VWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSE 453
+NK D + + +E G+DI A+DKD+ E
Sbjct: 329 AYNKADLTERQFPQIE---GNDI--LYSAKDKDSIKE 360
>gi|225026796|ref|ZP_03715988.1| hypothetical protein EUBHAL_01048 [Eubacterium hallii DSM 3353]
gi|224955915|gb|EEG37124.1| GTP-binding protein HflX [Eubacterium hallii DSM 3353]
Length = 432
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 170/309 (55%), Gaps = 44/309 (14%)
Query: 128 TFFGPGTVETIKC--HINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
+ G G VE IK H+ GAE I + LS +Q RNL+ +PV DR LI++
Sbjct: 53 VYVGTGRVEEIKAVAHMMGAE------VIIFDNTLSPMQLRNLKDIIERPVFDRTHLILQ 106
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF++ A T+EA++Q E A L Y+ RL TG E++S +G GSGG
Sbjct: 107 IFSSRARTREAQIQVETARLQYELPRL--------------TGMGEILSRQGGGSGGLSN 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GAGE +L+L +R+I R S L ++ EV + R QR R +G+ VA+VGY
Sbjct: 153 -KGAGEKKLELDKRKIRHRISELKKELREVEKNRETQRKRRLV------QGIPQVALVGY 205
Query: 306 TNAGKSTLVSAL-----------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVG 353
TNAGKSTL++A D + + LFATLD ++ + LP + LLSDTVG
Sbjct: 206 TNAGKSTLLNAFIDKYEENEEKKEDRKVMAKNMLFATLDTTVRKIHLPDKREFLLSDTVG 265
Query: 354 FISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN 413
FIS LP LV+AFH+TLEEV A+LL+ V+D + + +H Q L+++G E
Sbjct: 266 FISKLPHNLVEAFHSTLEEVKFANLLLEVVDYSDEHYMDHMEVTRQTLKELGADEIPC-- 323
Query: 414 MIEVWNKID 422
I V+NK D
Sbjct: 324 -IHVFNKCD 331
>gi|303236066|ref|ZP_07322669.1| GTP-binding protein HflX [Prevotella disiens FB035-09AN]
gi|302483939|gb|EFL46931.1| GTP-binding protein HflX [Prevotella disiens FB035-09AN]
Length = 421
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 200/378 (52%), Gaps = 22/378 (5%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + G ++ G G +E IK +I E + E + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVGGPNMTSYVGKGKLEEIKQYIKEKEDEEEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQLRNIEAELQVKILDRTSLILDIFAMRAQTASAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMTLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R L VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKVTQRKNRGR--------LIRVALVGYTNVGKSTIMNMLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VVL + LL+DTVGFI LP LVD+F +TL+EV EADLLVHV+D + P+ EE
Sbjct: 255 RKVVLENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPDFEEQLQV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
V + L+++ +++ +MI V+NKID + E + + + N S E K T ++
Sbjct: 315 VNETLKELECADK--PSMI-VFNKIDNYTWEEKEEDDLTPMTKENVSLEELKRTWMAKLN 371
Query: 457 VECIDNYGGDDADNNDGF 474
+C+ + +N D F
Sbjct: 372 EDCL-FISAKEKENVDEF 388
>gi|295115512|emb|CBL36359.1| GTP-binding protein HflX [butyrate-producing bacterium SM4/1]
Length = 417
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 171/298 (57%), Gaps = 36/298 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G +E ++ E EL A I + LS Q RNLE A V+DR +I++
Sbjct: 60 TYLGKGKIEEVR------ERAAELHATGIVCDDELSPAQLRNLEDALQIKVMDRTMVILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF +HA T+E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 114 IFASHAVTREGKIQVELAQLRYRAARLVGLRNSLSRLGGGIGTRG--------------- 158
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +L++ RR I ER L S++E V+R R V R R R+ + A+VGY
Sbjct: 159 ---PGEKKLEVDRRLIHERIGQLKSELENVKRHREVARQQRDRNCT------VSAAIVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVD 364
TNAGKSTL++ L+D+ + + LFATLDP +++ LPSG K+LL+DTVGFI LP L++
Sbjct: 210 TNAGKSTLLNYLTDAGILAQDMLFATLDPTTRTLELPSGQKILLTDTVGFIRKLPHHLIE 269
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF +TLEE +D+++HV+D + P +E V + L+Q+ +++ K +I V+NK+D
Sbjct: 270 AFKSTLEEARYSDIILHVVDVSNPQMETQIHIVYETLRQLEITD---KTVITVFNKMD 324
>gi|150004409|ref|YP_001299153.1| GTP-binding protein [Bacteroides vulgatus ATCC 8482]
gi|294775484|ref|ZP_06740996.1| GTP-binding protein HflX [Bacteroides vulgatus PC510]
gi|319643373|ref|ZP_07997999.1| hypothetical protein HMPREF9011_03600 [Bacteroides sp. 3_1_40A]
gi|345519737|ref|ZP_08799151.1| GTP-binding protein HflX [Bacteroides sp. 4_3_47FAA]
gi|423312592|ref|ZP_17290529.1| GTP-binding protein HflX [Bacteroides vulgatus CL09T03C04]
gi|149932833|gb|ABR39531.1| putative GTP-binding protein [Bacteroides vulgatus ATCC 8482]
gi|254835659|gb|EET15968.1| GTP-binding protein HflX [Bacteroides sp. 4_3_47FAA]
gi|294450629|gb|EFG19117.1| GTP-binding protein HflX [Bacteroides vulgatus PC510]
gi|317385002|gb|EFV65955.1| hypothetical protein HMPREF9011_03600 [Bacteroides sp. 3_1_40A]
gi|392688280|gb|EIY81569.1| GTP-binding protein HflX [Bacteroides vulgatus CL09T03C04]
Length = 417
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 182/334 (54%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + Y D F E VV+ + K A + T+ G G +E IK +I+ E ++ E
Sbjct: 26 ERKTKEYLDELEFLAETAGATVVKRFTQKLPAANSVTYVGKGKLEEIKEYIHQEEENERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTLMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+
Sbjct: 249 TLDTTVRKVIIENLPFLLTDTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE + V + + +G K + V+NKID +
Sbjct: 309 EEQISVVDKTIADLGAGG---KPTMIVFNKIDAY 339
>gi|295676897|ref|YP_003605421.1| GTP-binding proten HflX [Burkholderia sp. CCGE1002]
gi|295436740|gb|ADG15910.1| GTP-binding proten HflX [Burkholderia sp. CCGE1002]
Length = 404
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 182/335 (54%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLERA + V+DR LI
Sbjct: 61 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLERALNRRVVDRTSLI 114
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 115 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 157
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L +++++RR QR AR R+ +V++V
Sbjct: 158 G-LRGPGETQLETDRRLIGERIKALKIRLDKLRRQHGTQRRARSRNQ------TMSVSLV 210
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +G+V++SDTVGFI +LP Q
Sbjct: 211 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 270
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 271 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 327
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E + ++ D+ N SR T + +D
Sbjct: 328 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLD 362
>gi|374604323|ref|ZP_09677287.1| GTP-binding protein [Paenibacillus dendritiformis C454]
gi|374390060|gb|EHQ61418.1| GTP-binding protein [Paenibacillus dendritiformis C454]
Length = 424
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/322 (40%), Positives = 178/322 (55%), Gaps = 47/322 (14%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV QN S K + G G ++ + +N E+ D + N LS Q RNLE+
Sbjct: 45 VVTQNLS----KVNTTHYIGTGKLQDVTIMLNQHEA----DMVIFNDELSPSQLRNLEKD 96
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI++IF A TKEA+LQ E+A L Y RLV +R
Sbjct: 97 LDCKVVDRTLLILDIFGERAKTKEAQLQVEVAELQYMLPRLVGLR--------------- 141
Query: 232 VVSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
+ GR SGG G + GAGE +L+L RRRI ER + L ++E + R QR R++
Sbjct: 142 --ESLGRQSGGVGTKNRGAGEKKLELDRRRIEERITALNKELEILVAHRQTQRKKRKK-- 197
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDAR---------LFATLDPRLKSVVL 341
L V++VGYTNAGKST+++ L + LF+D++ LFATLD ++S+ L
Sbjct: 198 ----TELPVVSLVGYTNAGKSTVMNTLVE--LFTDSKDKFVFEKDMLFATLDTSVRSIDL 251
Query: 342 PSGKV-LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQV 400
K LL+DTVGF+S LP LV AF +TLEEV EADLLVHV+D + P E+H +
Sbjct: 252 EDNKTFLLTDTVGFVSKLPHHLVKAFRSTLEEVKEADLLVHVVDFSNPEYEQHIRITNET 311
Query: 401 LQQVGVSEEKLKNMIEVWNKID 422
L+ +G+ E + MI +NKID
Sbjct: 312 LKAIGI--EGIP-MIYAYNKID 330
>gi|372270423|ref|ZP_09506471.1| HSR1-like GTP-binding protein [Marinobacterium stanieri S30]
Length = 432
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 173/308 (56%), Gaps = 41/308 (13%)
Query: 116 NPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKP 175
+P GK + D V+ ++ H E + + N LS Q+RNLER
Sbjct: 54 SPKFFLGKGKVDEL-----VDLVRMH--------EAELVIFNHALSPGQERNLERELKCR 100
Query: 176 VLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSA 235
VLDR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 101 VLDRTGLILDIFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE----- 145
Query: 236 RGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGR 295
R GG G + G GET+L+ RR + R +L ++E+VR+ R R AR+R
Sbjct: 146 --RQKGGIG-LRGPGETQLETDRRLLRARIKAILKRLEKVRKQRDQGRRARQRAE----- 197
Query: 296 GLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGF 354
+ TV++VGYTNAGKSTL + ++ S++++ +LFATLDP L+ + L G +L+DTVGF
Sbjct: 198 -IPTVSLVGYTNAGKSTLFNRMTTSEVYAADQLFATLDPTLRKIELADVGHAILADTVGF 256
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
I LP +LV+AF ATL+E +A LL+HV+DC EH V VL+++G +E +
Sbjct: 257 IRHLPHKLVEAFRATLQETTDASLLLHVIDCYDEERREHIEQVDAVLEEIGAAE---VPV 313
Query: 415 IEVWNKID 422
++V+NKID
Sbjct: 314 LQVYNKID 321
>gi|429738388|ref|ZP_19272198.1| GTP-binding protein HflX [Prevotella saccharolytica F0055]
gi|429160359|gb|EKY02827.1| GTP-binding protein HflX [Prevotella saccharolytica F0055]
Length = 415
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 181/328 (55%), Gaps = 21/328 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGELDAIFV 156
Y D F + V V+ + K T+ G G +E IK +I E ++ E+ +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQKVNAPSMVTYVGKGKLEEIKQYIKAEEEAEREIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E+ +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIEKELNVKILDRTSLILDIFAMRAQTASAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILGRMALLKERLAEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R GR + T A+VGYTN GKSTL++ LS S++F++ +LFATLD +
Sbjct: 203 KQKTTQRKNR-------GRMIRT-ALVGYTNVGKSTLMNLLSKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLLVHV+D + P+ EE
Sbjct: 255 RKVVIENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPDFEEQIQV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
V L+++ +++ +MI V+NKID +
Sbjct: 315 VENTLKELDCADK--PSMI-VFNKIDSY 339
>gi|209521121|ref|ZP_03269849.1| GTP-binding proten HflX [Burkholderia sp. H160]
gi|209498431|gb|EDZ98558.1| GTP-binding proten HflX [Burkholderia sp. H160]
Length = 395
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 181/335 (54%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLERA + V+DR LI
Sbjct: 52 AKMFVGSGKAEELRLACEAN------DIELVIFNHALAPAQQRNLERALNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L +++++RR QR AR R+ +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKALKIRLDKLRRQHGTQRRARNRNQT------MSVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L +G+V++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRELPHQ 261
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ + V +VL +G + + V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNEVLHAIGADTIR---QVLVFNKI 318
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E ++ D+ N SR T + +D
Sbjct: 319 DAVPELAARGHAVERDEYGNISRVFLSARTGQGLD 353
>gi|429728781|ref|ZP_19263485.1| GTP-binding protein HflX [Peptostreptococcus anaerobius VPI 4330]
gi|429147756|gb|EKX90778.1| GTP-binding protein HflX [Peptostreptococcus anaerobius VPI 4330]
Length = 437
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/306 (40%), Positives = 175/306 (57%), Gaps = 44/306 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G +E IK + AES LDA I N LSG Q RN+E GK ++DR LI++
Sbjct: 70 TYLGSGKIEEIKIY---AES---LDATMIVFNDELSGAQIRNIEDIIGKKIIDRTTLILD 123
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A ++E KLQ ELA L Y RL R+ G G++ S G G G RG
Sbjct: 124 IFAQRALSREGKLQVELAQLKY---RLPRLYGMGGQM-----------SRTGAGIGTRG- 168
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +L+ +R IL R + + +++EV + R +QR+ R+++ + VA+VGY
Sbjct: 169 ---PGEQKLEKDKRHILNRAAAIRKELKEVVKHREIQRSQRQKNK------IPIVALVGY 219
Query: 306 TNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
TNAGKSTL++ L ++ +F LFATLD L+ +LP+ + LL DTVGF+S
Sbjct: 220 TNAGKSTLLNELIKTHPDYEAEKGVFVKDMLFATLDVTLRRALLPNKREFLLVDTVGFVS 279
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP L++AF +TLEEV ADL++HV+D T + + + T VL+ +G E K I
Sbjct: 280 KLPHDLIEAFKSTLEEVNYADLILHVIDATNESSDIQKHTTDSVLKDLGADE---KATIT 336
Query: 417 VWNKID 422
V+NKID
Sbjct: 337 VYNKID 342
>gi|299141395|ref|ZP_07034532.1| GTP-binding protein HflX [Prevotella oris C735]
gi|298577355|gb|EFI49224.1| GTP-binding protein HflX [Prevotella oris C735]
Length = 415
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 185/342 (54%), Gaps = 22/342 (6%)
Query: 85 LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHING 144
L N E + Y D F + V V+ + K+ A T+ G G +E IK +I
Sbjct: 19 LITNNQSEAKTKEYLDELEFLADTAGAVTVKRFTQKANGPSAVTYVGKGKLEEIKNYIET 78
Query: 145 AESKGE-LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
E E + + + LS Q RN+E +LDR LI++IF A T AK Q ELA
Sbjct: 79 CEENEEPIGMVIFDDELSAKQIRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELA 138
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL R+ E + + G G + G GET+L++ RR IL+
Sbjct: 139 QYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQ 189
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R + L ++ E+ + + QR R R + VA+VGYTN GKST+++ L+ S++F
Sbjct: 190 RITLLKQRLVEIDKQKVTQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVF 241
Query: 324 SDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVL 383
++ +LFATLD ++ VV+ + LL+DTVGFI LP LVD+F +TL+EV EAD+L+HV+
Sbjct: 242 AENKLFATLDTTVRKVVVDNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADVLLHVV 301
Query: 384 DCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
D + P+ EE V + L +G S++ +MI ++NKID YH
Sbjct: 302 DISHPDFEEQIQVVEKTLADLGCSDK--PSMI-IFNKIDNYH 340
>gi|225012019|ref|ZP_03702456.1| GTP-binding proten HflX [Flavobacteria bacterium MS024-2A]
gi|225003574|gb|EEG41547.1| GTP-binding proten HflX [Flavobacteria bacterium MS024-2A]
Length = 402
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 196/363 (53%), Gaps = 35/363 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V+Q + K TF G G ++ + +N + ++ ++ + L+ QQ N+E+
Sbjct: 45 VMQRFTQKIDLPNPKTFIGSGKIQEVLEFVN----ENDISSVIFDDELTPAQQGNIEKTL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR GLI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 KVKILDRTGLILDIFAQRAQTSYARTQVELAQYEYLLPRL------KGLWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + ++ S L ++ + + A QR R
Sbjct: 149 -----RQRGGIG-MRGPGETEIETDRRIVRDKISLLKKKLINIDKQMATQRGNRG----- 197
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTV 352
L VA+VGYTN GKSTL++ ++ S++F++ +LFATLD ++ VV+ + L+SDTV
Sbjct: 198 ---ALVRVALVGYTNVGKSTLMNVVAKSNVFAENKLFATLDTTVRKVVIGNLPFLMSDTV 254
Query: 353 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 412
GFI LP QLV++F +TL+EV EADLL+HV+D + PN E+H +V Q+L+++ + K
Sbjct: 255 GFIRKLPTQLVESFKSTLDEVQEADLLLHVVDISHPNFEDHIDSVNQILKEIKSLD---K 311
Query: 413 NMIEVWNKID-YHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNN 471
+ V+NKID Y E + E I+ + +FS E K T ++ + + + DN
Sbjct: 312 PTLMVFNKIDVYQPEPWDETELIEQREEKHFSLEEWKQTWMHRMNGQAL-FISAINKDNL 370
Query: 472 DGF 474
+GF
Sbjct: 371 EGF 373
>gi|330817161|ref|YP_004360866.1| Small GTP-binding protein [Burkholderia gladioli BSR3]
gi|327369554|gb|AEA60910.1| Small GTP-binding protein [Burkholderia gladioli BSR3]
Length = 400
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 135/376 (35%), Positives = 198/376 (52%), Gaps = 43/376 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N ++D + N L+ QQRNLER + V+DR LI
Sbjct: 52 AAMFIGSGKAEELRLACDAN------DVDIVIFNHPLAPAQQRNLERTLNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R+ R + ++++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHNTQRRQRERN-----RTM-SMSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS--GKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V + G++++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYIGDEVGQIVVSDTVGFIRELPHQ 261
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLHEIGADAIR---QVLVFNKI 318
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDDADNNDGFVSE-D 478
D E + ++ D+ N SR T + +D I DA G + E D
Sbjct: 319 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLDTLRAAIAEIASSDALAGTGLLPERD 378
Query: 479 L---GESMNKNHNDYS 491
+ G + + H+D++
Sbjct: 379 VRFDGNGLTEPHDDHT 394
>gi|255534186|ref|YP_003094557.1| GTP-binding protein HflX [Flavobacteriaceae bacterium 3519-10]
gi|255340382|gb|ACU06495.1| GTP-binding protein HflX [Flavobacteriaceae bacterium 3519-10]
Length = 403
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 182/342 (53%), Gaps = 33/342 (9%)
Query: 89 NSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESK 148
N EE+ Y D F VV+ + K + TF G G + ++ +I +
Sbjct: 21 NQDEEKLVEYMDELEFLALTAGATVVKRFTQKLTQPDPKTFIGSGKAQEVRDYI----KE 76
Query: 149 GELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYK 208
++ + + LS Q +NLER +LDR LI++IF A T A+ Q ELA Y
Sbjct: 77 NDIGTVIFDDELSPSQLKNLEREIEVKILDRTNLILDIFAQRAQTSYARTQVELAQYQYL 136
Query: 209 KSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHL 268
RL R+ + R GG G + G GETE++ RR I +R S L
Sbjct: 137 LPRLTRMW-----------------THLERQKGGIG-MRGPGETEIETDRRIIRDRISLL 178
Query: 269 LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARL 328
+++ + R A QR R + + A+VGYTN GKSTL++A+S SD+F++ +L
Sbjct: 179 KEKLKTIDRQMATQRNNRGK--------VVRAALVGYTNVGKSTLMNAISKSDVFAENKL 230
Query: 329 FATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 388
FATLD ++ VV+ + LL+DTVGFI LP QLV++F +TL+EV EADLL+HV+D +
Sbjct: 231 FATLDTTVRKVVIGNLPFLLTDTVGFIRKLPTQLVESFKSTLDEVREADLLIHVVDISHE 290
Query: 389 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGD 430
+ E+H +V Q+L ++ + K MI V+NKID E D
Sbjct: 291 SFEDHIDSVNQILMEINAHQ---KPMIMVFNKIDDFSYEKKD 329
>gi|374595907|ref|ZP_09668911.1| GTP-binding protein HflX [Gillisia limnaea DSM 15749]
gi|373870546|gb|EHQ02544.1| GTP-binding protein HflX [Gillisia limnaea DSM 15749]
Length = 406
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/315 (38%), Positives = 174/315 (55%), Gaps = 33/315 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V++ + K K TF G G + +K I+ + AIF + LS QQ+N+E+
Sbjct: 45 VLKRFTQKMEKPDPKTFMGSGKILEVKAFIDEHDVGT---AIFDDE-LSPAQQKNIEKVL 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 101 NVKILDRTNLILDIFAQRAQTSYARKQVELAQYQYLLPRLA------GMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + ++ S L +IE + + VQR R +
Sbjct: 149 -----RQRGGIG-MRGPGETEIETDRRIVRDKISLLKKKIETIDKQMEVQRGNRGQ---- 198
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTV 352
L VA+VGYTN GKSTL++ +S S++F++ +LFATLD ++ VV+ + LL+DTV
Sbjct: 199 ----LVRVALVGYTNVGKSTLMNLISKSEVFAENKLFATLDTTVRKVVIRNLPFLLTDTV 254
Query: 353 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 412
GFI LP QL+++F +TL+EV EADLL+H++D + PN EEH +V Q L + + K
Sbjct: 255 GFIRKLPTQLIESFKSTLDEVREADLLLHIVDISHPNFEEHIASVNQTLADIKSAN---K 311
Query: 413 NMIEVWNKIDYHDEE 427
I V+NKID + E
Sbjct: 312 PTIMVFNKIDAYTAE 326
>gi|295092241|emb|CBK78348.1| GTP-binding protein HflX [Clostridium cf. saccharolyticum K10]
Length = 417
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 171/298 (57%), Gaps = 36/298 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G +E ++ E EL A I + LS Q RNLE A V+DR +I++
Sbjct: 60 TYLGKGKIEEVR------ERAAELHATGIVCDDELSPAQLRNLEDALQIKVMDRTMVILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF +HA T+E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 114 IFASHAVTREGKIQVELAQLRYRAARLVGLRNSLSRLGGGIGTRG--------------- 158
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +L++ RR I ER L S++E V+R R V R R R+ + A+VGY
Sbjct: 159 ---PGEKKLEVDRRLIHERIGQLKSELENVKRHREVARQQRDRNCT------VSAAIVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVD 364
TNAGKSTL++ L+D+ + + LFATLDP +++ LPSG K+LL+DTVGFI LP L++
Sbjct: 210 TNAGKSTLLNYLTDAGILAQDMLFATLDPTTRTLELPSGQKILLTDTVGFIRKLPHHLIE 269
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF +TLEE +D+++HV+D + P +E V + L+Q+ +++ K +I V+NK+D
Sbjct: 270 AFKSTLEEARYSDIILHVVDVSNPQMETQIHIVYETLRQLEITD---KTVITVFNKMD 324
>gi|107104042|ref|ZP_01367960.1| hypothetical protein PaerPA_01005115 [Pseudomonas aeruginosa PACS2]
gi|355643057|ref|ZP_09053066.1| GTP-binding protein HflX [Pseudomonas sp. 2_1_26]
gi|354830057|gb|EHF14116.1| GTP-binding protein HflX [Pseudomonas sp. 2_1_26]
Length = 419
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/354 (38%), Positives = 194/354 (54%), Gaps = 39/354 (11%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ + A G G VE + + AE+ ++ + N L+ Q+RNLERA+ VL
Sbjct: 33 SVSRHQPSAKYLIGSGKVEELHDLVK-AEN---VELVIFNHTLTPSQERNLERAFECRVL 88
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 89 DRTGLILDIFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE------- 131
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +D +
Sbjct: 132 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKR---AD---I 184
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
V++VGYTNAGKSTL +AL+ S++++ +LFATLDP L+ + L G V+L+DTVGFI
Sbjct: 185 PAVSLVGYTNAGKSTLFNALTASEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFIR 244
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV+AF ATLEE ADLL+HV+D P + VL VL ++G +E M+E
Sbjct: 245 HLPHKLVEAFRATLEESSNADLLLHVIDAYEPERDAQVEQVLAVLGEIGANE---LPMLE 301
Query: 417 VWNKIDYHDEEMGDVE-YIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDD 467
V+NK+D + VE +I DD R T E +D+ + I G+D
Sbjct: 302 VYNKVDL----LPSVEPHIQRDDSGKPVRVWLSAQTGEGLDLLRQAIAELLGED 351
>gi|330998173|ref|ZP_08321999.1| GTP-binding protein HflX [Paraprevotella xylaniphila YIT 11841]
gi|329568865|gb|EGG50663.1| GTP-binding protein HflX [Paraprevotella xylaniphila YIT 11841]
Length = 419
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 178/334 (53%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE- 150
E + + Y D F V V+ + K + T+ G G +E I+ +I E
Sbjct: 26 ERKTNEYLDELEFLAHTAGAVTVKRFTQKVNGPNSVTYVGKGKLEEIRTYIEAEEEAERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E+ +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQLRNIEKELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKQ 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ R + QR+ R R + VA+VGYTN GKSTL++ LS SD+F++ +LFA
Sbjct: 197 RLAEIDRQKTTQRSNRGR--------MIRVALVGYTNVGKSTLMNLLSKSDVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+HV+D P+
Sbjct: 249 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDIAHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
E+ V + L +G S+ K + V+NKID +
Sbjct: 309 EDQIQVVEKTLGDLGCSD---KPCMIVFNKIDAY 339
>gi|377820984|ref|YP_004977355.1| GTP-binding proten HflX [Burkholderia sp. YI23]
gi|357935819|gb|AET89378.1| GTP-binding proten HflX [Burkholderia sp. YI23]
Length = 422
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 186/333 (55%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G VE ++ ++ ++ + N L+ QQRNLE A + V+DR LI++
Sbjct: 47 AKMFIGSGKVEELRLQCEASD----VELVIFNHALAPAQQRNLEVALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S++E++RR QR R R+ R + +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKALKSRLEKLRRQHGTQRRQRVRN-----RTM-SVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L +G V++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVFLGEEAGHVVVSDTVGFIRELPHQLV 258
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + AD+L+HV+D ++ + V +VL+ G+ + ++ ++ V+NKID
Sbjct: 259 AAFRATLEETIHADVLLHVVDASSAVRLDQIDQVNEVLR--GIGADGIRQIL-VFNKIDA 315
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E E ++ D+ N SR T + +D
Sbjct: 316 VPELAARGEAVERDEYGNISRVFLSARTGQGLD 348
>gi|289422706|ref|ZP_06424546.1| GTP-binding protein HflX [Peptostreptococcus anaerobius 653-L]
gi|289156885|gb|EFD05510.1| GTP-binding protein HflX [Peptostreptococcus anaerobius 653-L]
Length = 436
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 176/311 (56%), Gaps = 44/311 (14%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRV 180
K T+ G G +E IK + AES LDA I N LSG Q RN+E GK ++DR
Sbjct: 64 KVDTATYLGSGKIEEIKIY---AES---LDATMIVFNDELSGAQIRNIEDIIGKKIIDRT 117
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
LI++IF A ++E KLQ ELA L Y RL R+ G G++ S G G
Sbjct: 118 TLILDIFAQRALSREGKLQVELAQLKY---RLPRLYGMGGQM-----------SRTGAGI 163
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
G RG GE +L+ +R IL R + + +++EV + R +QR+ R+++ + V
Sbjct: 164 GTRG----PGEQKLEKDKRHILNRAAAIRKELKEVVKHREIQRSQRQKNK------IPIV 213
Query: 301 AVVGYTNAGKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
A+VGYTNAGKSTL++ L ++ +F LFATLD L+ +LP+ + LL DT
Sbjct: 214 ALVGYTNAGKSTLLNELIKTHPDYEAEKGVFVKDMLFATLDVTLRRALLPNKREFLLVDT 273
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+S LP L++AF +TLEEV ADL++HV+D T + + + T VL+ +G E
Sbjct: 274 VGFVSKLPHDLIEAFKSTLEEVNYADLILHVIDATNESSDIQKHTTDSVLKDLGADE--- 330
Query: 412 KNMIEVWNKID 422
K I V+NKID
Sbjct: 331 KATITVYNKID 341
>gi|119474821|ref|ZP_01615174.1| GTP-binding protein HflX [marine gamma proteobacterium HTCC2143]
gi|119451024|gb|EAW32257.1| GTP-binding protein HflX [marine gamma proteobacterium HTCC2143]
Length = 433
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 169/298 (56%), Gaps = 32/298 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE I+ + + K E+ + N LS Q+RNLE VLDR GLI++IF
Sbjct: 58 FVGSGKVEEIRTQVE--QQKAEV--VLFNHALSPSQERNLESELKCRVLDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLQHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R + ++++VR+ R R AR R + TV++VGYTNA
Sbjct: 156 PGETQLESDRRLLRARIKAISKRLDKVRKQRDQGRRARSRAD------IPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ ++++ +LFATLDP L+ V +P G ++L+DTVGFI LP +LV+AF
Sbjct: 210 GKSTLFNTLTQANVYVADQLFATLDPTLRRVSIPDFGPIVLADTVGFIRHLPHKLVEAFR 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
ATLEE ++DLL+HV+DC E++ V VL ++G +E++NKID D
Sbjct: 270 ATLEEAAQSDLLIHVIDCADEEREDNIAQVEVVLNEIGADA---IPRLEIYNKIDLVD 324
>gi|15836693|ref|NP_297381.1| GTP-binding protein [Xylella fastidiosa 9a5c]
gi|9104866|gb|AAF82901.1|AE003863_3 GTP-binding protein [Xylella fastidiosa 9a5c]
Length = 450
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 169/295 (57%), Gaps = 30/295 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G ++ IK A++ G D I +N LS +Q+RNLE++ + V+DR GLI++IF
Sbjct: 56 TLIGSGKLKEIKA---TADATGA-DLILINHSLSPVQERNLEKSLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G RG
Sbjct: 112 AQRACSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRGGAIGLRG--- 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR + +R L ++ +V R R AR R + +A+VGYTN
Sbjct: 156 -PGETQLETDRRLLQKRVEQLQKRLSKVEVQRTQMRRARVRSE------VPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
+GKSTL +AL+ + ++ +LFATLDP+++ +VLP +L+DTVGF+ LP +LV AF
Sbjct: 209 SGKSTLFNALTGASAYTADQLFATLDPKVRRIVLPGSSAMLADTVGFVRHLPHELVAAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL E EADLL+HV+D P EE V +VLQ +G E L ++ V+NKID
Sbjct: 269 STLSEAREADLLLHVIDAADPLREERIDQVDEVLQAIGAGE--LPQLL-VFNKID 320
>gi|227535923|ref|ZP_03965972.1| GTP-binding protein HflX [Sphingobacterium spiritivorum ATCC 33300]
gi|227244166|gb|EEI94181.1| GTP-binding protein HflX [Sphingobacterium spiritivorum ATCC 33300]
Length = 402
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 167/297 (56%), Gaps = 33/297 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E IK +I+ E +D + + LS Q RN+E + +LDR LI++IF
Sbjct: 64 TFIGSGKMEEIKSYIDAEE----IDMVVFDDELSPSQLRNIENFFKVKILDRSNLILDIF 119
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+HA T +AK Q ELA L Y RL R+ + R GG G +
Sbjct: 120 ASHAKTAQAKTQVELAQLQYILPRLTRMW-----------------THLERQRGGIG-MR 161
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE++++ RR IL + S +++ + + QR R + VA+VGYTN
Sbjct: 162 GPGESQIESDRRMILNKISLFKERLKSIDKQNETQRKNRGE--------MIRVALVGYTN 213
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKST+++ +S SD+ + +LFATLD ++ VV+ + LLSDTVGFI LP LV+ F
Sbjct: 214 VGKSTIMNMISKSDVLIENKLFATLDTTVRKVVIDNLPFLLSDTVGFIRKLPHHLVECFK 273
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+TL+EV EAD+L+HV+D + PN E+H V + L+ +G + K +I V+NKID +
Sbjct: 274 STLDEVREADVLIHVVDISHPNFEDHIHAVNETLKDLGALD---KPVITVFNKIDAY 327
>gi|116053092|ref|YP_793411.1| GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218894038|ref|YP_002442907.1| putative GTP-binding protein [Pseudomonas aeruginosa LESB58]
gi|254244166|ref|ZP_04937488.1| hypothetical protein PA2G_05009 [Pseudomonas aeruginosa 2192]
gi|296391783|ref|ZP_06881258.1| GTP-binding protein HflX [Pseudomonas aeruginosa PAb1]
gi|313109944|ref|ZP_07795872.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016]
gi|386061114|ref|YP_005977636.1| putative GTP-binding protein [Pseudomonas aeruginosa M18]
gi|386063548|ref|YP_005978852.1| putative GTP-binding protein [Pseudomonas aeruginosa NCGM2.S1]
gi|416865087|ref|ZP_11915663.1| GTP-binding protein HflX [Pseudomonas aeruginosa 138244]
gi|416874089|ref|ZP_11917920.1| GTP-binding protein HflX [Pseudomonas aeruginosa 152504]
gi|421170761|ref|ZP_15628686.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 700888]
gi|421177198|ref|ZP_15634854.1| GTP-binding protein [Pseudomonas aeruginosa CI27]
gi|424944265|ref|ZP_18360028.1| probable GTP-binding protein [Pseudomonas aeruginosa NCMG1179]
gi|451985424|ref|ZP_21933644.1| GTP-binding protein HflX [Pseudomonas aeruginosa 18A]
gi|115588313|gb|ABJ14328.1| putative GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126197544|gb|EAZ61607.1| hypothetical protein PA2G_05009 [Pseudomonas aeruginosa 2192]
gi|218774266|emb|CAW30083.1| probable GTP-binding protein [Pseudomonas aeruginosa LESB58]
gi|310882374|gb|EFQ40968.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016]
gi|334834621|gb|EGM13564.1| GTP-binding protein HflX [Pseudomonas aeruginosa 138244]
gi|334843937|gb|EGM22519.1| GTP-binding protein HflX [Pseudomonas aeruginosa 152504]
gi|346060711|dbj|GAA20594.1| probable GTP-binding protein [Pseudomonas aeruginosa NCMG1179]
gi|347307420|gb|AEO77534.1| putative GTP-binding protein [Pseudomonas aeruginosa M18]
gi|348032107|dbj|BAK87467.1| putative GTP-binding protein [Pseudomonas aeruginosa NCGM2.S1]
gi|404522420|gb|EKA32923.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 700888]
gi|404529842|gb|EKA39862.1| GTP-binding protein [Pseudomonas aeruginosa CI27]
gi|451756945|emb|CCQ86167.1| GTP-binding protein HflX [Pseudomonas aeruginosa 18A]
gi|453046453|gb|EME94169.1| GTP-binding protein HflX [Pseudomonas aeruginosa PA21_ST175]
Length = 433
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 138/354 (38%), Positives = 194/354 (54%), Gaps = 39/354 (11%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ + A G G VE + + AE+ ++ + N L+ Q+RNLERA+ VL
Sbjct: 47 SVSRHQPSAKYLIGSGKVEELHDLVK-AEN---VELVIFNHTLTPSQERNLERAFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +D +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKR---AD---I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
V++VGYTNAGKSTL +AL+ S++++ +LFATLDP L+ + L G V+L+DTVGFI
Sbjct: 199 PAVSLVGYTNAGKSTLFNALTASEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFIR 258
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV+AF ATLEE ADLL+HV+D P + VL VL ++G +E M+E
Sbjct: 259 HLPHKLVEAFRATLEESSNADLLLHVIDAYEPERDAQVEQVLAVLGEIGANE---LPMLE 315
Query: 417 VWNKIDYHDEEMGDVE-YIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDD 467
V+NK+D + VE +I DD R T E +D+ + I G+D
Sbjct: 316 VYNKVDL----LPSVEPHIQRDDSGKPVRVWLSAQTGEGLDLLRQAIAELLGED 365
>gi|124267179|ref|YP_001021183.1| GTP-binding protein [Methylibium petroleiphilum PM1]
gi|124259954|gb|ABM94948.1| putative GTP-binding protein [Methylibium petroleiphilum PM1]
Length = 414
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 172/307 (56%), Gaps = 38/307 (12%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + +K + AES G+ + + LS QQRNLER G VLDR GLI+E
Sbjct: 56 AALFLGSGKADELKALV--AESGGQ--CVIFDQALSPTQQRNLERHLGVEVLDRTGLILE 111
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A A + E KLQ ELA L Y +RLVR R T E V
Sbjct: 112 IFAARAQSHEGKLQVELAQLQYLSNRLVR------RWTHLERQRGGVGHR---------- 155
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GE +++L RR I ER L +++++V+R R QR +R R G V+++GY
Sbjct: 156 -GGPGERQIELDRRMIGERIKALKARLDKVKRQRGTQRRSRERAGTF------RVSLIGY 208
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK--VLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL + ++ +LFATLD + + L + V LSDTVGFI DLP LV
Sbjct: 209 TNAGKSTLFNALVKARSYAADQLFATLDTTTRQLYLEDAQRSVSLSDTVGFIRDLPHTLV 268
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV---GVSEEKLKNMIEVWNK 420
AF ATL+E +ADLL+HV+D ++P L E R V +VL ++ G+ + I V+NK
Sbjct: 269 KAFAATLQEAADADLLLHVVDASSPVLAEQRVEVERVLAEIDAAGIPQ------ILVYNK 322
Query: 421 IDYHDEE 427
+D DEE
Sbjct: 323 LDQLDEE 329
>gi|24372195|ref|NP_716237.1| 50S ribosome assembly GTPase HflX [Shewanella oneidensis MR-1]
gi|24346104|gb|AAN53682.1| 50S ribosome assembly GTPase HflX [Shewanella oneidensis MR-1]
Length = 435
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 168/286 (58%), Gaps = 27/286 (9%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
E + + N LS Q+RNLE+ VLDR LI++IF A T E KLQ ELA L +
Sbjct: 74 EANVVIFNHALSPAQERNLEQVCQCRVLDRTSLILDIFAQRARTHEGKLQVELAQLRHMS 133
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
+RLVR G T R GG G + G GET+L+ RR + R ++
Sbjct: 134 TRLVR----------GWTHLE-------RQKGGIG-LRGPGETQLETDRRLLRGRIKNIN 175
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
++E V + R R AR+R SD + TV++VGYTNAGKSTL +AL+ SD+++ +LF
Sbjct: 176 KRLERVDKQREQSRRARKR---SD---MPTVSLVGYTNAGKSTLFNALTSSDVYAADQLF 229
Query: 330 ATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
ATLDP L+ + LP G V+L+DTVGFI LP LV AF ATL+E +A+LL+H++DC N
Sbjct: 230 ATLDPTLRKLDLPDGAVILADTVGFIRHLPHDLVAAFKATLQETRQAELLLHIVDCADEN 289
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 435
+ ++ V VL+++ E + +I V NKID ++ +EY D
Sbjct: 290 MADNFEQVQSVLKEIDADE--VMQLI-VCNKIDLLEDVTPRIEYDD 332
>gi|406979290|gb|EKE01103.1| hypothetical protein ACD_21C00213G0002 [uncultured bacterium]
Length = 423
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 168/300 (56%), Gaps = 36/300 (12%)
Query: 129 FFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
F G G ++ H++ AE + N LS Q+RNLER V+DR GLI++I
Sbjct: 57 FIGTGKALEVRDSVHLHRAE------LVIFNHALSPAQERNLERLLQCRVIDRTGLILDI 110
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A + E KLQ ELA L + +RLVR G + RG G G RG
Sbjct: 111 FAQRARSFEGKLQVELALLKHLSTRLVR-------------GWTHLERQRG-GIGLRG-- 154
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GET+L+ RR I R + ++ +VR+ R R AR+ + T+A+VGYT
Sbjct: 155 --PGETQLETDRRLIRNRMRVITERLAKVRKQRQQSRRARKLAA------VPTIALVGYT 206
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDA 365
NAGKSTL + L+ +D++ RLFATLDP L+ V LP G ++L+DTVGFI LP LVDA
Sbjct: 207 NAGKSTLFNQLTGADVYIADRLFATLDPTLRRVSLPKDGTIILADTVGFIRHLPHDLVDA 266
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
F ATLEEV EADLL+HV+D + N + + V VL +G ++ I V+NKID ++
Sbjct: 267 FRATLEEVCEADLLLHVVDASDENKQANIAQVQAVLTSIGAADVP---QILVYNKIDLNE 323
>gi|228470781|ref|ZP_04055629.1| GTP-binding protein HflX [Porphyromonas uenonis 60-3]
gi|228307454|gb|EEK16459.1| GTP-binding protein HflX [Porphyromonas uenonis 60-3]
Length = 411
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 197/360 (54%), Gaps = 48/360 (13%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ I +++ E AIF + L+ Q RN+ER G +LDR LI++IF
Sbjct: 62 TFVGKGKLDEIAEYVSAHEVGL---AIFDDE-LAPNQLRNIERQLGIRILDRTSLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q E+A Y RL R+ + R GG +
Sbjct: 118 ATRAQTAHAKTQVEMAQYQYMLPRLTRL-----------------WTHLERQRGGNIGLR 160
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR IL + S L Q++++ + ++VQR R + + VA+VGYTN
Sbjct: 161 GPGETQLETDRRIILRKISQLKEQLKKIDKQKSVQRQNRGK--------MVRVALVGYTN 212
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ L+ SD+F++ +LFATLD ++ VVL + LL+DTVGFI LP QLV++F
Sbjct: 213 VGKSTLMNVLAKSDIFAENKLFATLDTTVRKVVLGNLAFLLADTVGFIRKLPTQLVESFK 272
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV E+DL++HV+D + P E+ V + L+++ +K + I V+NKID +
Sbjct: 273 STLDEVRESDLILHVVDISHPEFEDQIAVVTETLREIDALGDKPQ--ILVFNKIDAY--- 327
Query: 428 MGDVEYI--DGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMNK 485
++I D DD++ ++ + T E ++ + G N+ F+S GE M++
Sbjct: 328 ----QHIPKDPDDLTPATKL---NRTREELEKSWMARMG-----NDCTFISARTGEGMDE 375
>gi|146305671|ref|YP_001186136.1| HSR1-like GTP-binding protein [Pseudomonas mendocina ymp]
gi|421505259|ref|ZP_15952197.1| GTP-binding protein HflX [Pseudomonas mendocina DLHK]
gi|145573872|gb|ABP83404.1| GTP-binding protein HflX [Pseudomonas mendocina ymp]
gi|400343668|gb|EJO92040.1| GTP-binding protein HflX [Pseudomonas mendocina DLHK]
Length = 433
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 175/306 (57%), Gaps = 32/306 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ S + A G G VE ++ + E+ + + N L+ Q+RNLERA+ VL
Sbjct: 47 SVPSSRLTAKYLIGSGKVEELRDQVRAIEA----ELVIFNHTLTPSQERNLERAFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLDHMSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +D +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQKLEKVRSQREQARRGRKR---AD---I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
+V++VGYTNAGKSTL +AL+ S++++ +LFATLDP L+ + L G ++L+DTVGFI
Sbjct: 199 PSVSLVGYTNAGKSTLFNALTASEVYAADQLFATLDPTLRRLELDDLGPIVLADTVGFIR 258
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV+AF ATLEE +DLL+HV+D P V VL+++G E M+E
Sbjct: 259 HLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMAQIEQVQAVLKEIGAHE---LPMLE 315
Query: 417 VWNKID 422
V+NK+D
Sbjct: 316 VYNKLD 321
>gi|406038553|ref|ZP_11045908.1| GTP-binding proten HflX [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 445
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/316 (37%), Positives = 179/316 (56%), Gaps = 32/316 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
++++ +++ K F G G E I + ++ + + + LS Q+RNLE+
Sbjct: 43 ILEHLTVQRNKPDPKFFVGSGKAEEIAQLVEHVDA----ELVIFDHSLSPAQERNLEKIM 98
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR GLI++IF A T E KLQ ELA L Y +RL+R G A
Sbjct: 99 KCRVIDRTGLILDIFAQRARTHEGKLQVELAQLKYLSTRLIR-------------GWAAG 145
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+ G G + G GET+L+ RR I R S L ++ +V+ TR RAAR++
Sbjct: 146 FEQQKGGIG----LKGPGETQLETDRRLIKVRISQLKDKLVKVQHTRMQGRAARQK---- 197
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDT 351
+ TV++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ + G V+L+DT
Sbjct: 198 --AAIPTVSLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTVVLADT 255
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+ DL LV++F ATLEE +EA LL+HV+D +P++ E V VL+++G E L
Sbjct: 256 VGFVRDLQHDLVESFKATLEETLEATLLLHVIDSHSPDMHEQIEAVEGVLKEIGADEPVL 315
Query: 412 KNMIEVWNKIDYHDEE 427
+ V+NKID +E
Sbjct: 316 R----VYNKIDLSGDE 327
>gi|336399808|ref|ZP_08580608.1| GTP-binding proten HflX [Prevotella multisaccharivorax DSM 17128]
gi|336069544|gb|EGN58178.1| GTP-binding proten HflX [Prevotella multisaccharivorax DSM 17128]
Length = 419
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 179/329 (54%), Gaps = 22/329 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGELDAIFV 156
Y D F + V V+ + ++G ++ G G +E I +I E ++ E+ +
Sbjct: 35 YLDELEFLADTAGAVTVKRFTQRTGGPSQTSYVGKGKLEEIHQYIKDEEDNEREIGMVIF 94
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 95 DDELSAKQLRNIENELHVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRM- 153
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL R S L ++ E+
Sbjct: 154 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKQRLTEID 205
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ ++ QR R R L A+VGYTN GKSTL++ L+ S++F++ +LFATLD +
Sbjct: 206 KQKSTQRKNRGR--------LIRAALVGYTNVGKSTLMNLLAKSEVFAENKLFATLDTTV 257
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LV++F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 258 RKVVIRNLPFLLADTVGFIRKLPTDLVESFKSTLDEVREADLLLHVVDISHPDFEEQIQV 317
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
V L+ +G S+ K I ++NKID YH
Sbjct: 318 VNNTLKDLGCSD---KPTILIFNKIDNYH 343
>gi|281423549|ref|ZP_06254462.1| GTP-binding protein HflX [Prevotella oris F0302]
gi|281402369|gb|EFB33200.1| GTP-binding protein HflX [Prevotella oris F0302]
Length = 415
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 185/342 (54%), Gaps = 22/342 (6%)
Query: 85 LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHING 144
L N E + Y D F + V V+ + K+ A T+ G G +E IK +I
Sbjct: 19 LITNNQSEAKTKEYLDELEFLADTAGAVTVKRFTQKANGPSAVTYVGKGKLEEIKNYIET 78
Query: 145 AESKGE-LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
E E + + + LS Q RN+E +LDR LI++IF A T AK Q ELA
Sbjct: 79 CEENEEPIGMVIFDDELSAKQIRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELA 138
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL R+ E + + G G + G GET+L++ RR IL+
Sbjct: 139 QYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQ 189
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R + L ++ E+ + + QR R R + VA+VGYTN GKST+++ L+ S++F
Sbjct: 190 RITLLKQRLVEIDKQKITQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVF 241
Query: 324 SDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVL 383
++ +LFATLD ++ VV+ + LL+DTVGFI LP LVD+F +TL+EV EAD+L+HV+
Sbjct: 242 AENKLFATLDTTVRKVVVDNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADVLLHVV 301
Query: 384 DCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
D + P+ EE V + L +G S++ +MI ++NKID YH
Sbjct: 302 DISHPDFEEQIQVVEKTLADLGCSDK--PSMI-IFNKIDNYH 340
>gi|345017496|ref|YP_004819849.1| GTP-binding proten HflX [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032839|gb|AEM78565.1| GTP-binding proten HflX [Thermoanaerobacter wiegelii Rt8.B1]
Length = 413
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 175/296 (59%), Gaps = 34/296 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E ++ AE++ E+D + VN L+G Q +N+E V+DR LI++IF
Sbjct: 58 YIGKGKLEELEFF---AENQ-EVDLVIVNDELTGTQIKNMEDFLNVKVIDRTNLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE LQ ELA L Y+ RL + G RL G G
Sbjct: 114 KRAKSKEGMLQVELAQLKYRLPRLAGLGGQLSRLGGGIGT------------------RG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + ++EE+ R R++QR R+++ + +A+VGYTNA
Sbjct: 156 PGETKLETDRRHIKNRIKAIEKKLEEIERHRSLQRERRKKNR------IPVIAIVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++AL++++++ + +LFATLDP + +VL SG+ V+L DTVGFI LP LV+AF
Sbjct: 210 GKSTLLNALTNAEVYVEDKLFATLDPTARRLVLSSGREVILIDTVGFIRKLPHDLVEAFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG-VSEEKLKNMIEVWNKID 422
+TLEEV ADLL+HV+D +P++EE V +VL +G ++ K I V+NKID
Sbjct: 270 STLEEVKYADLLLHVIDVASPDMEEKIKVVEKVLSDLGAINTPK----INVFNKID 321
>gi|219130091|ref|XP_002185207.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403386|gb|EEC43339.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 415
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 192/367 (52%), Gaps = 67/367 (18%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGK----------- 174
T+ G G V+ E E D I +A LS QQ++LE A+ K
Sbjct: 36 TYIGSGKVK------EAEEKMKEYDCCTIVFDAELSPGQQKSLENAFNKESLQNDFLFQG 89
Query: 175 ---PVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI++IF HA T+E KLQ +LA Y+K RL R+ T E
Sbjct: 90 GEIKVIDRTALILDIFAQHAKTREGKLQVDLALHEYRKPRLTRM------WTHLE----- 138
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R G+GG G + G GE++L++ +R + +R L +I++V++ RA+ R R R
Sbjct: 139 ----RQSGAGGVG-LRGPGESQLEIDKRLVRDRIITLKQKIDDVQKQRAMHRRGRER--- 190
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK----VL 347
GL +++VGYTNAGKS++++ L+ + + +++ LFATLDP + V LP K VL
Sbjct: 191 ---TGLPILSLVGYTNAGKSSMLNYLTKAGVMAESMLFATLDPTTRKVKLPGYKTHPEVL 247
Query: 348 LSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS 407
L+DTVGFI LP LV AF ATLEEV EAD+L+HV+D + P + +V VL + S
Sbjct: 248 LTDTVGFIQKLPTHLVAAFRATLEEVQEADVLIHVIDVSNPTWRKQEQSVRSVLADIEAS 307
Query: 408 EEKLKNMIEVWNKIDYHDEEMGD--------------VEYIDGDDISNFSRAEDKDTTS- 452
+ K M+ V NKID D D V ++GD + +F + +S
Sbjct: 308 D---KPMVRVLNKIDLLDPVEADELRCQAALEDFTVAVSALEGDGMQDFVSVVEDAMSSL 364
Query: 453 -EPVDVE 458
P++VE
Sbjct: 365 LVPIEVE 371
>gi|150009872|ref|YP_001304615.1| GTP-binding protein HflX [Parabacteroides distasonis ATCC 8503]
gi|255012877|ref|ZP_05285003.1| GTP-binding protein HflX [Bacteroides sp. 2_1_7]
gi|256838419|ref|ZP_05543929.1| GTP-binding protein HflX [Parabacteroides sp. D13]
gi|262382852|ref|ZP_06075989.1| GTP-binding protein HflX [Bacteroides sp. 2_1_33B]
gi|298374226|ref|ZP_06984184.1| GTP-binding protein HflX [Bacteroides sp. 3_1_19]
gi|301312397|ref|ZP_07218313.1| GTP-binding protein HflX [Bacteroides sp. 20_3]
gi|410102191|ref|ZP_11297118.1| GTP-binding protein HflX [Parabacteroides sp. D25]
gi|423333725|ref|ZP_17311506.1| GTP-binding protein HflX [Parabacteroides distasonis CL03T12C09]
gi|423337157|ref|ZP_17314901.1| GTP-binding protein HflX [Parabacteroides distasonis CL09T03C24]
gi|149938296|gb|ABR44993.1| GTP-binding protein HflX [Parabacteroides distasonis ATCC 8503]
gi|256739338|gb|EEU52662.1| GTP-binding protein HflX [Parabacteroides sp. D13]
gi|262295730|gb|EEY83661.1| GTP-binding protein HflX [Bacteroides sp. 2_1_33B]
gi|298268594|gb|EFI10249.1| GTP-binding protein HflX [Bacteroides sp. 3_1_19]
gi|300829580|gb|EFK60234.1| GTP-binding protein HflX [Bacteroides sp. 20_3]
gi|409227035|gb|EKN19937.1| GTP-binding protein HflX [Parabacteroides distasonis CL03T12C09]
gi|409238345|gb|EKN31138.1| GTP-binding protein HflX [Parabacteroides distasonis CL09T03C24]
gi|409238913|gb|EKN31701.1| GTP-binding protein HflX [Parabacteroides sp. D25]
Length = 403
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 170/295 (57%), Gaps = 33/295 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q RN+E+ +LDR LI++IF
Sbjct: 62 TFVGTGKLQEIKEYV----VENEIGLVIFDDELSPKQLRNIEKELQVKILDRTSLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 ASRAQTAHAKTQVELAQYKYMLPRLTRLW-----------------THLERQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ +R IL++ + L ++ ++ + ++VQR R + + VA+VGYTN
Sbjct: 160 GPGETQLETDKRIILDKIARLKKELVDIDKQKSVQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ LS S++F++ +LFATLD ++ V++ + LLSDTVGFI LP +LV++F
Sbjct: 212 VGKSTLMNLLSKSEVFAENKLFATLDTTVRKVIIENLPFLLSDTVGFIRKLPTELVESFK 271
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV EADLLVH++D + P EE V + L ++ +E K MI V+NK+D
Sbjct: 272 STLDEVREADLLVHIVDISHPTFEEQIEVVNRTLAEIDKTE---KPMIMVFNKVD 323
>gi|212550977|ref|YP_002309294.1| GTP-binding protein HflX [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549215|dbj|BAG83883.1| GTP-binding protein HflX [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 408
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 186/343 (54%), Gaps = 43/343 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
+F G G + IK +K +D + + L+ Q RNLE ++DR LI++IF
Sbjct: 53 SFVGSGKLLEIKDFTENKNNK--IDIVIFDDELTTKQLRNLETILKVKIMDRTSLILDIF 110
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T AK Q ELA Y RL + + R SGG +
Sbjct: 111 ASRAQTAHAKKQVELAQYNYMLPRL-----------------THLWTHLERQSGGFR-MR 152
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR IL + HL +++++ + + VQR+ R R + VA+VGYTN
Sbjct: 153 GPGETQLETDRRIILNKIIHLKKELKKIDKQKVVQRSNRGR--------MVRVALVGYTN 204
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL+S LS SD+F++ +LFAT+D ++ V + + LL+DTVGFI LP +L+++F
Sbjct: 205 VGKSTLMSLLSKSDIFTENKLFATIDTTVRKVTINNLVFLLTDTVGFIRKLPTELIESFK 264
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV EADLL+H++D + P+ EE V+Q L + +++EK K I V+NKID
Sbjct: 265 STLDEVREADLLIHIVDISHPSFEEQVKVVIQTLNE--INKEK-KPYIVVFNKID----- 316
Query: 428 MGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN 470
+ +I GD SR D + P+D E +GG +N
Sbjct: 317 --ALLHITGDKNDLISR----DQANVPLD-ELKKTWGGKLHEN 352
>gi|340352232|ref|ZP_08675117.1| GTP-binding protein HflX [Prevotella pallens ATCC 700821]
gi|339614960|gb|EGQ19645.1| GTP-binding protein HflX [Prevotella pallens ATCC 700821]
Length = 420
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 194/364 (53%), Gaps = 21/364 (5%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + G ++ G G + IK +I E + E + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVGGPNMTSYVGKGKLAEIKEYIKQKEDEDEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQLRNIENELQVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMTLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R L VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKITQRKNRGR--------LIRVALVGYTNVGKSTIMNMLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VVL + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVLQNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIQV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
V + L+ + +E+ +MI ++NKID + E + + + + N S E K T ++
Sbjct: 315 VTETLKDLDCAEK--PSMI-IFNKIDNYSWEEKEEDDLTPMNKKNISLTELKRTWMAKLN 371
Query: 457 VECI 460
+C+
Sbjct: 372 DDCL 375
>gi|313205251|ref|YP_004043908.1| GTP-binding protein hflx [Paludibacter propionicigenes WB4]
gi|312444567|gb|ADQ80923.1| GTP-binding protein HflX [Paludibacter propionicigenes WB4]
Length = 404
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 165/295 (55%), Gaps = 33/295 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ GPG + IK ++ + E+ + + LS Q RN+E +LDR LI++IF
Sbjct: 58 TYVGPGKLIEIKAFVD----ENEIGVVIFDDELSPKQLRNIEAELKVLILDRTSLILDIF 113
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA L Y RL R+ + R GG G +
Sbjct: 114 AKRAQTASAKTQVELAQLQYTLPRLTRLW-----------------THLERQQGGIG-MR 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+++ RR IL + S L ++++ + + QR R + + VA+VGYTN
Sbjct: 156 GPGETQIETDRRIILTKISLLKQNLKDIDKQMSTQRKNRGK--------MVRVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ V++ + LLSDTVGFI LP LV +F
Sbjct: 208 VGKSTLMNLISKSEIFAENKLFATLDTTVRKVIIDNLPFLLSDTVGFIRKLPHHLVQSFK 267
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV EADLL+HV+D + PN EE V Q L+++ E K MI ++NKID
Sbjct: 268 STLDEVREADLLLHVVDVSHPNFEEQLEVVNQTLKEIDPLE---KPMILIFNKID 319
>gi|347536088|ref|YP_004843513.1| GTP-binding protein HflX [Flavobacterium branchiophilum FL-15]
gi|345529246|emb|CCB69276.1| GTP-binding protein HflX [Flavobacterium branchiophilum FL-15]
Length = 406
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 172/312 (55%), Gaps = 33/312 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV+ K K TF G G ++ I ++ + + I + LS QQ+N+ R
Sbjct: 45 VVKRFFQKMDKPNPKTFLGTGKIDEINLYV----KENNVSTIVFDDELSPSQQKNISRII 100
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
+LDR LI++IF A T A+ Q ELA +Y RL G T E
Sbjct: 101 DCKILDRTHLILDIFAQRAETSYARTQVELAQCIYLLPRL------SGMWTHLE------ 148
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
R GG G + G GETE++ RR + +R + L +I+ + + +VQR+ R
Sbjct: 149 -----RQKGGIG-MRGPGETEIETDRRIVRDRIALLKDKIKIIDKQMSVQRSNRG----- 197
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTV 352
+ VA+VGYTN GKSTL++ + SD+F + +LFATLD ++ +V+ + LLSDTV
Sbjct: 198 ---AMVRVALVGYTNVGKSTLMNTVGKSDVFVENKLFATLDTTVRKIVIKNLPFLLSDTV 254
Query: 353 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 412
GFI LP QL+D+F +TL+EV EADLL+HV+D P+ E+H +V Q+L ++ + K
Sbjct: 255 GFIRKLPTQLIDSFKSTLDEVREADLLLHVVDIAHPDFEDHIASVNQILAEIKCDD---K 311
Query: 413 NMIEVWNKIDYH 424
+I V+NKID +
Sbjct: 312 PVIMVFNKIDAY 323
>gi|78189141|ref|YP_379479.1| GTP-binding protein HflX [Chlorobium chlorochromatii CaD3]
gi|78171340|gb|ABB28436.1| GTP-binding protein HflX [Chlorobium chlorochromatii CaD3]
Length = 431
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 177/308 (57%), Gaps = 40/308 (12%)
Query: 130 FGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNA 189
G G V+ ++ +I + +D + + LS Q RNLERAWG V+DR GLI+ IF
Sbjct: 64 IGRGKVDEMEAYIKSEK----IDVVIFDDDLSPGQARNLERAWGCKVIDRTGLILHIFAI 119
Query: 190 HAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGA 249
A + +AK+Q ELA L Y RL +G +S + G G +G
Sbjct: 120 RAQSTQAKMQVELAQLEYILPRL--------------SGAWTHLSKQKGGIGNKG----P 161
Query: 250 GETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAG 309
GET+++ RR + R + L ++ EV R + +R+ ++ V++VGYTNAG
Sbjct: 162 GETQIETDRRLVRNRIALLKKKLREVERQHYTRTRSRQ--------NVSRVSLVGYTNAG 213
Query: 310 KSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
KSTL++AL ++ F++ RLFATLD + + + L K VLLSDTVGFI LP LV++F
Sbjct: 214 KSTLMNALCPQAEAFAENRLFATLDTKTRRLELKINKLVLLSDTVGFIRKLPHTLVESFK 273
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE- 426
+TL+EV++AD L+HV+D + P+ EE V L+++GV +++ IEV+NKID +E
Sbjct: 274 STLDEVLQADFLLHVIDISHPSFEEQIAVVRDTLREIGVQHDQI---IEVFNKIDALEEP 330
Query: 427 ----EMGD 430
EMGD
Sbjct: 331 TLLREMGD 338
>gi|126172808|ref|YP_001048957.1| HSR1-like GTP-binding protein [Shewanella baltica OS155]
gi|153002272|ref|YP_001367953.1| GTP-binding protein HSR1-like [Shewanella baltica OS185]
gi|386339579|ref|YP_006035945.1| GTP-binding proten HflX [Shewanella baltica OS117]
gi|125996013|gb|ABN60088.1| GTP-binding protein, HSR1-related [Shewanella baltica OS155]
gi|151366890|gb|ABS09890.1| GTP-binding protein HSR1-related [Shewanella baltica OS185]
gi|334861980|gb|AEH12451.1| GTP-binding proten HflX [Shewanella baltica OS117]
Length = 435
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 166/286 (58%), Gaps = 27/286 (9%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
E + + N LS Q+RNLE+ VLDR LI++IF A T E KLQ ELA L +
Sbjct: 74 EANVVIFNHALSPAQERNLEQVCHCRVLDRTTLILDIFAQRARTHEGKLQVELAQLRHMS 133
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
+RL+R G T R GG G + G GET+L+ RR + R ++
Sbjct: 134 TRLIR----------GWTHLE-------RQKGGIG-LRGPGETQLETDRRLLRGRIKNIN 175
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
++E V + R R AR+R SD L+TV++VGYTNAGKSTL +AL+ SD+++ +LF
Sbjct: 176 KRLERVDKQREQSRRARKR---SD---LSTVSLVGYTNAGKSTLFNALTSSDVYAADQLF 229
Query: 330 ATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
ATLDP L+ + LP G V+L+DTVGFI LP LV AF ATL+E +A+LL+H++DC N
Sbjct: 230 ATLDPTLRKLDLPDGAVILADTVGFIRHLPHDLVAAFKATLQETRQAELLLHIIDCADEN 289
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 435
+ ++ V VL+ + E + V NKID ++ +EY D
Sbjct: 290 MADNFDQVQSVLKDIEADEVM---QLVVCNKIDLLEDVTPRIEYND 332
>gi|402566394|ref|YP_006615739.1| small GTP-binding protein [Burkholderia cepacia GG4]
gi|402247591|gb|AFQ48045.1| small GTP-binding protein [Burkholderia cepacia GG4]
Length = 391
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 182/333 (54%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 47 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 258
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 259 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 315
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 316 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|300771631|ref|ZP_07081506.1| GTP-binding protein HflX [Sphingobacterium spiritivorum ATCC 33861]
gi|300761620|gb|EFK58441.1| GTP-binding protein HflX [Sphingobacterium spiritivorum ATCC 33861]
Length = 396
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 167/297 (56%), Gaps = 33/297 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E IK +I+ E +D + + LS Q RN+E + +LDR LI++IF
Sbjct: 64 TFIGSGKMEEIKSYIDAEE----IDMVVFDDELSPSQLRNIENFFKVKILDRSNLILDIF 119
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+HA T +AK Q ELA L Y RL R+ + R GG G +
Sbjct: 120 ASHAKTAQAKTQVELAQLQYILPRLTRMW-----------------THLERQRGGIG-MR 161
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE++++ RR IL + S +++ + + QR R + VA+VGYTN
Sbjct: 162 GPGESQIESDRRMILNKISLFKERLKSIDKQNETQRKNRGE--------MIRVALVGYTN 213
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKST+++ +S SD+ + +LFATLD ++ VV+ + LLSDTVGFI LP LV+ F
Sbjct: 214 VGKSTIMNMISKSDVLIENKLFATLDTTVRKVVIDNLPFLLSDTVGFIRKLPHHLVECFK 273
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+TL+EV EAD+L+HV+D + PN E+H V + L+ +G + K +I ++NKID +
Sbjct: 274 STLDEVREADVLIHVVDISHPNFEDHIHAVNETLKDLGALD---KPVITIFNKIDAY 327
>gi|283796120|ref|ZP_06345273.1| GTP-binding protein HflX [Clostridium sp. M62/1]
gi|291076336|gb|EFE13700.1| GTP-binding protein HflX [Clostridium sp. M62/1]
Length = 417
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 170/296 (57%), Gaps = 32/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E ++ G ++ I + LS Q RNLE A V+DR +I++IF
Sbjct: 60 TYLGKGKIEEVR----GRAAELHATGIVCDDELSPAQLRNLEDALQIKVMDRTMVILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+HA T+E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 116 ASHAVTREGKIQVELAQLRYRAARLVGLRNSLSRLGGGIGTRG----------------- 158
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GE +L++ RR I ER L S++E V+R R V R R R+ + A+VGYTN
Sbjct: 159 -PGEKKLEVDRRLIHERIGQLKSELENVKRHREVARQQRDRNCT------VSAAIVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAF 366
AGKSTL++ L+D+ + + LFATLDP +++ LPSG K+LL+DTVGFI LP L++AF
Sbjct: 212 AGKSTLLNYLTDAGILAQDMLFATLDPTTRTLELPSGQKILLTDTVGFIRKLPHHLIEAF 271
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TLEE +D+++HV+D + P +E V + L+Q+ +++ K +I V+NK+D
Sbjct: 272 KSTLEEARYSDIILHVVDVSNPQMETQIHIVYETLRQLEITD---KTVITVFNKMD 324
>gi|78066576|ref|YP_369345.1| small GTP-binding protein [Burkholderia sp. 383]
gi|77967321|gb|ABB08701.1| GTP-binding protein HflX [Burkholderia sp. 383]
Length = 396
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 182/333 (54%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 52 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 320
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|29840032|ref|NP_829138.1| GTP-binding protein HflX [Chlamydophila caviae GPIC]
gi|29834379|gb|AAP05016.1| GTP-binding protein HflX, putative [Chlamydophila caviae GPIC]
Length = 458
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 161/273 (58%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFASRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L S
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTS 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ R RG+ + A++GYTN+GKSTL++ L+ ++ +++ +LFA
Sbjct: 207 DLKSVEKQRKERRKAKER------RGIPSFALIGYTNSGKSTLLNFLTSAETYAEDKLFA 260
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + +LP G +VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCILPCGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T +LQ++G+ K+ + V NKID
Sbjct: 321 AFEHIETTKAILQELGIEHPKI---VTVLNKID 350
>gi|83720345|ref|YP_442761.1| GTP-binding protein HflX [Burkholderia thailandensis E264]
gi|83654170|gb|ABC38233.1| GTP-binding protein HflX [Burkholderia thailandensis E264]
Length = 392
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 180/335 (53%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 52 AALFVGSGKAEELRLACEAN------DVEIVIFNHALAPAQQRNLERVLNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R G +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHHTQRRQRARSG------TMSVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 261
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V VL+++G + I V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIR---QILVFNKI 318
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E ++ D+ N SR T + +D
Sbjct: 319 DAVPELAARGGAVERDEYGNISRVFLSARTGQGLD 353
>gi|159899445|ref|YP_001545692.1| GTP1/OBG protein [Herpetosiphon aurantiacus DSM 785]
gi|159892484|gb|ABX05564.1| GTP1/OBG protein [Herpetosiphon aurantiacus DSM 785]
Length = 444
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/314 (40%), Positives = 170/314 (54%), Gaps = 24/314 (7%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV S K T+ GPG V + S+ D + + LS Q RNLE A
Sbjct: 53 VVGTVSQKLDHPNPKTYIGPGKVR----EVADLRSETPYDVVIFDEELSPSQARNLEEAI 108
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI++IF HA T+E LQ ELA Y RL R T
Sbjct: 109 KVKVIDRTTLILDIFAQHARTREGSLQVELAQYDYLLPRLRR----------AWTHLERQ 158
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
G GSG + G GET+L+ +R I +R + L Q+ +V R R + R R+ G
Sbjct: 159 SGGGGGGSGVGVGLRGPGETQLESDQRIIGKRIALLKEQLADVHRHRELYRQNRQESG-- 216
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
L ++VVGYTNAGKSTL++ L+ +D+ + LFATLDP + V LP G+ VL++DT
Sbjct: 217 ----LPIISVVGYTNAGKSTLLNRLAQADVLAADMLFATLDPTTRKVALPGGRAVLMTDT 272
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFI LP LV AF ATLEE+ EAD+L+HVLD T N+EE TV+ L ++ V +
Sbjct: 273 VGFIQRLPTALVAAFRATLEEIAEADVLLHVLDLTHANVEEQFKTVIDTLSELKVQD--- 329
Query: 412 KNMIEVWNKIDYHD 425
K ++ V+NKID D
Sbjct: 330 KPILTVFNKIDKID 343
>gi|357418110|ref|YP_004931130.1| GTP-binding protein [Pseudoxanthomonas spadix BD-a59]
gi|355335688|gb|AER57089.1| GTP-binding protein [Pseudoxanthomonas spadix BD-a59]
Length = 452
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 180/325 (55%), Gaps = 40/325 (12%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
++ K TF G G ++ +K A++ G D I VN L+ Q+RNLE+A + VLDR
Sbjct: 52 RTDKPSPSTFIGSGKLDEVKA---AADATGA-DLILVNHALTPGQERNLEKALERRVLDR 107
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
GLI++IF A + E KLQ ELA L + +RLVR G + RG G
Sbjct: 108 TGLILDIFAQRARSHEGKLQVELAQLRHMATRLVR-------------GWTHLERQRG-G 153
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
S G + G GET+L+ RR + +R L ++E+V R AR R L
Sbjct: 154 SIG---LRGPGETQLETDRRLLQKRVDQLQKRLEKVEVQHTQMRRARVRSE------LPR 204
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLP 359
VA+VGYTNAGKSTL +AL+ + ++ +LFATLDP ++ V L G V+L+DTVGF+ DLP
Sbjct: 205 VALVGYTNAGKSTLFNALTGAQAYAADQLFATLDPTVRRVNLAGGHVVLADTVGFVRDLP 264
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
+LV AF +TL E EADLL+HV+D P E V VL ++G + + ++ V+N
Sbjct: 265 HELVAAFRSTLSEAREADLLLHVVDAADPLHAERIAQVDLVLTEIGAGD--IPQLL-VFN 321
Query: 420 KID-------YHDEEMGDVEYIDGD 437
KID HD GD +DGD
Sbjct: 322 KIDRIEGAQPRHDAPEGD---LDGD 343
>gi|444357831|ref|ZP_21159315.1| GTP-binding protein HflX [Burkholderia cenocepacia BC7]
gi|444371757|ref|ZP_21171290.1| GTP-binding protein HflX [Burkholderia cenocepacia K56-2Valvano]
gi|443594656|gb|ELT63291.1| GTP-binding protein HflX [Burkholderia cenocepacia K56-2Valvano]
gi|443605521|gb|ELT73369.1| GTP-binding protein HflX [Burkholderia cenocepacia BC7]
Length = 390
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 182/333 (54%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 47 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 258
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 259 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 315
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 316 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|423334866|ref|ZP_17312644.1| GTPases [Lactobacillus reuteri ATCC 53608]
gi|337728387|emb|CCC03488.1| GTPases [Lactobacillus reuteri ATCC 53608]
Length = 425
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 196/387 (50%), Gaps = 51/387 (13%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G V+ I+ + I N LS Q RNLE G +LDR LI+EIF
Sbjct: 56 TYFGKGKVDEIR----DVADANHVPTIITNDELSPSQLRNLEEGTGCRILDRTALILEIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ ++A L Y+ RL +T +E + + GG GF +
Sbjct: 112 ATRAQTKEAKLQVQIAELQYRLPRL-------------QTSASERLDQQT--GGGSGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L++ RR I + +HL ++ + ++ +R R + + T A+VGYT
Sbjct: 157 RGAGETKLEMDRRTIQHQIAHLRQELAAIAKSEQTKRKQRVK------SAIPTAALVGYT 210
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDL 358
NAGKST+++ L + +F LFATLD ++ + LP K LLSDTVGF+S L
Sbjct: 211 NAGKSTIMNGLVRKYGAAEEKTVFEKNMLFATLDTSVRQLTLPDQKRFLLSDTVGFVSKL 270
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P LV++F +TL E ADLL+ V+D + P+ +E T + L+Q+G+++ MI V+
Sbjct: 271 PTHLVESFKSTLAEAANADLLIQVIDYSDPHYKEMMETTNETLKQIGITDIP---MINVF 327
Query: 419 NKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADN-------N 471
NK D + E +E GDD S +D S + V+ I + D
Sbjct: 328 NKADRTEIEFPILE---GDDQVVISAKQD---ASLDLLVDVIKKHLFKDYVTTTLLIPFT 381
Query: 472 DGFVSEDLGESMNKNHNDY-SDGWLLS 497
DG V L E N Y S+G LL+
Sbjct: 382 DGHVVSYLNEHTNILDTKYESNGTLLT 408
>gi|431931711|ref|YP_007244757.1| GTP-binding protein HflX [Thioflavicoccus mobilis 8321]
gi|431830014|gb|AGA91127.1| GTP-binding protein HflX [Thioflavicoccus mobilis 8321]
Length = 445
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 173/309 (55%), Gaps = 32/309 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E +K + AE D + N +LS QQRNLER G+ V+DR GLI++
Sbjct: 54 ARLFIGSGKAEELKGLV-AAEGA---DLVIFNHVLSPAQQRNLERELGRRVVDRTGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARSFEGKLQVELAQLEHLATRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + +R + L ++ + R R ARR+ L VA+VGY
Sbjct: 152 LRGPGETQLETDRRLLDKRIAVLKRRLARIGAQRDQGRRARRKA------ELPAVALVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVL-LSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ + ++ +LFATLDP L+ + LPSG+V+ ++DTVGF+SDLP +LV
Sbjct: 206 TNAGKSTLFNRLTGAGVYQADQLFATLDPTLRRLPLPSGQVVTVADTVGFVSDLPHELVA 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATLEE A+LL+HV+D A + V VL ++G ++V NKID
Sbjct: 266 AFRATLEETRSAELLLHVIDAAAATRDRQIEDVTAVLAEIGAEAVP---QLQVMNKIDLL 322
Query: 425 DEEMGDVEY 433
++ M VEY
Sbjct: 323 EDAMPRVEY 331
>gi|348530156|ref|XP_003452577.1| PREDICTED: putative GTP-binding protein 6-like [Oreochromis
niloticus]
Length = 522
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 220/433 (50%), Gaps = 51/433 (11%)
Query: 4 AISVVKRTQLRSITQTLTFPISLHSYS----YSSSKRQTKDNKDKDDLHD--VVTLFNRD 57
A++ ++ + +I QT F +S SSS ++ +D+D L D V LF +
Sbjct: 31 AVNTCQQQRGATILQTRAFGLSAFRLKSTDDLSSSNGFNEEGEDEDFLEDSEVEELFQQQ 90
Query: 58 -----PDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHV 112
+ R+F++ P +K + Q L +A + +G +T L
Sbjct: 91 IPAGIGEGQHRVFIIHPDVKWGSRKQHLTTAELMMAEA-----EGLVNT------LENWT 139
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERA 171
VV L + FG G +T+ I ++ G + A+FVN LS + +R E
Sbjct: 140 VVDKMILSTKTPEKKRIFGKGNFQTLTERIR--QTAG-ITAVFVNVERLSPLSEREFEEV 196
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
WG V DR +++ IF +A TKEAKLQ LA + +SRL + E
Sbjct: 197 WGVKVFDRYSVVLHIFRCNARTKEAKLQISLAEIPLLRSRL----------------KNE 240
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+ + +G G R +I G+GET ++Q+R + ER + +E++R+ R + R+ R+
Sbjct: 241 MANLDQQGGGSR-YIGGSGETLYEIQQRLLKEREIKIRLALEKLRKKRHLLRSQRKH--- 296
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSG-KVLLS 349
R V+V+GYTN GK+TL+ AL+ D+ L +LFATLD + + LPS VL
Sbjct: 297 ---REFPVVSVLGYTNCGKTTLIKALTGDTGLQPRNQLFATLDVTVHAGQLPSHMTVLYV 353
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DT+GF+S LP QL+D+F ATLE++ +DLL+HV D + P + VL VL+ + + +
Sbjct: 354 DTIGFLSQLPHQLIDSFSATLEDIKHSDLLIHVRDISHPETANQKVNVLNVLKNLQIPDR 413
Query: 410 KLKNMIEVWNKID 422
+ +MIEV NK D
Sbjct: 414 LMNSMIEVHNKTD 426
>gi|254252263|ref|ZP_04945581.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158]
gi|124894872|gb|EAY68752.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158]
Length = 391
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 182/333 (54%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++ + N L+ QQRNLERA + V+DR LI++
Sbjct: 47 AAMFIGSGKADELRL----ACDAHNVEIVIFNHALAPAQQRNLERALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 258
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 259 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 315
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 316 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|160876996|ref|YP_001556312.1| GTP-binding proten HflX [Shewanella baltica OS195]
gi|217974859|ref|YP_002359610.1| GTP-binding proten HflX [Shewanella baltica OS223]
gi|373948052|ref|ZP_09608013.1| GTP-binding proten HflX [Shewanella baltica OS183]
gi|378710210|ref|YP_005275104.1| GTP-binding proten HflX [Shewanella baltica OS678]
gi|386326102|ref|YP_006022219.1| GTP-binding proten HflX [Shewanella baltica BA175]
gi|418022328|ref|ZP_12661315.1| GTP-binding proten HflX [Shewanella baltica OS625]
gi|160862518|gb|ABX51052.1| GTP-binding proten HflX [Shewanella baltica OS195]
gi|217499994|gb|ACK48187.1| GTP-binding proten HflX [Shewanella baltica OS223]
gi|315269199|gb|ADT96052.1| GTP-binding proten HflX [Shewanella baltica OS678]
gi|333820247|gb|AEG12913.1| GTP-binding proten HflX [Shewanella baltica BA175]
gi|353538553|gb|EHC08108.1| GTP-binding proten HflX [Shewanella baltica OS625]
gi|373884652|gb|EHQ13544.1| GTP-binding proten HflX [Shewanella baltica OS183]
Length = 435
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 166/286 (58%), Gaps = 27/286 (9%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
E + + N LS Q+RNLE+ VLDR LI++IF A T E KLQ ELA L +
Sbjct: 74 EANVVIFNHALSPAQERNLEQVCHCRVLDRTTLILDIFAQRARTHEGKLQVELAQLRHMS 133
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
+RL+R G T R GG G + G GET+L+ RR + R ++
Sbjct: 134 TRLIR----------GWTHLE-------RQKGGIG-LRGPGETQLETDRRLLRGRIKNIN 175
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
++E V + R R AR+R SD L+TV++VGYTNAGKSTL +AL+ SD+++ +LF
Sbjct: 176 KRLERVDKQREQSRRARKR---SD---LSTVSLVGYTNAGKSTLFNALTSSDVYAADQLF 229
Query: 330 ATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
ATLDP L+ + LP G V+L+DTVGFI LP LV AF ATL+E +A+LL+H++DC N
Sbjct: 230 ATLDPTLRKLDLPDGAVILADTVGFIRHLPHDLVAAFKATLQETRQAELLLHIVDCADEN 289
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 435
+ ++ V VL+ + E + V NKID ++ +EY D
Sbjct: 290 MADNFDQVQSVLKDIEADEVM---QLVVCNKIDLLEDVTPRIEYND 332
>gi|254248076|ref|ZP_04941397.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
gi|124872852|gb|EAY64568.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
Length = 390
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 182/333 (54%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 47 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 258
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 259 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 315
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 316 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 348
>gi|171321329|ref|ZP_02910288.1| GTP-binding proten HflX [Burkholderia ambifaria MEX-5]
gi|171093386|gb|EDT38574.1| GTP-binding proten HflX [Burkholderia ambifaria MEX-5]
Length = 396
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 179/333 (53%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 52 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGADTIR---QVLVFNKIDA 320
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|167581712|ref|ZP_02374586.1| GTP-binding protein HflX [Burkholderia thailandensis TXDOH]
gi|167619828|ref|ZP_02388459.1| GTP-binding protein HflX [Burkholderia thailandensis Bt4]
gi|257138971|ref|ZP_05587233.1| GTP-binding protein HflX [Burkholderia thailandensis E264]
Length = 387
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 180/335 (53%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 47 AALFVGSGKAEELRLACEAN------DVEIVIFNHALAPAQQRNLERVLNRRVVDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R G +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHHTQRRQRARSG------TMSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 256
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V VL+++G + I V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIR---QILVFNKI 313
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGGAVERDEYGNISRVFLSARTGQGLD 348
>gi|429204169|ref|ZP_19195460.1| GTP-binding protein [Lactobacillus saerimneri 30a]
gi|428147375|gb|EKW99600.1| GTP-binding protein [Lactobacillus saerimneri 30a]
Length = 418
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 174/330 (52%), Gaps = 42/330 (12%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G V I A DA+ VN LS Q RNLE+ G V+DR LI++
Sbjct: 47 AATYFGAGKV----TEIFQAGQVHAADALIVNDELSPTQIRNLEQDTGLTVIDRTALILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A TKEAKLQ E+A L Y+ RL T AE + + G+ G GF
Sbjct: 103 IFASRARTKEAKLQVEIAKLQYQLPRL-------------RTSAAEKLDQQTAGNAGGGF 149
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ GAGET+L+L RR I ++ S L ++++V++ + Q RR GL VA+VG
Sbjct: 150 TNRGAGETKLELNRRVIEKQISQLRKKLKDVQKDQVTQSKQRR------ASGLPQVALVG 203
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
YTNAGKST ++ L D +F LFATLD ++ V K LLSDTVGF+S
Sbjct: 204 YTNAGKSTTMNGLLQLTGQEEDKQVFVKNMLFATLDTSVRKVHFADNKEFLLSDTVGFVS 263
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP LV AF +TL E ADLLV V+D + P+ E T + L +G+ + MI
Sbjct: 264 KLPHNLVAAFESTLAEARNADLLVQVIDASDPHAREMIATTEETLASIGIDDIP---MIY 320
Query: 417 VWNKIDYHDEEMGDVEY--IDGDDISNFSR 444
+NK D + + Y + GD I+ +R
Sbjct: 321 AYNKAD-----LANTRYPLVTGDAITYSAR 345
>gi|424904617|ref|ZP_18328127.1| GTP-binding protein HflX [Burkholderia thailandensis MSMB43]
gi|390930595|gb|EIP87997.1| GTP-binding protein HflX [Burkholderia thailandensis MSMB43]
Length = 381
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 179/335 (53%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 41 AAMFVGSGKAEELRLACEAN------DVEIVIFNHALAPAQQRNLERMLNRRVVDRTSLI 94
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 95 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 137
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++ +RR QR R R G +V++V
Sbjct: 138 G-LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHHTQRRQRARSGA------MSVSLV 190
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 191 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 250
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V VL+++G + + V+NKI
Sbjct: 251 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIR---QVLVFNKI 307
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E ++ D+ N SR T + +D
Sbjct: 308 DAVPELAARGGAVERDEYGNISRVFLSARTGQGLD 342
>gi|373461393|ref|ZP_09553133.1| GTP-binding protein HflX [Prevotella maculosa OT 289]
gi|371952351|gb|EHO70190.1| GTP-binding protein HflX [Prevotella maculosa OT 289]
Length = 415
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 129/364 (35%), Positives = 195/364 (53%), Gaps = 21/364 (5%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGELDAIFV 156
Y D F + V V+ + K A T+ G G +E IK +I + AE++ + +
Sbjct: 32 YLDELEFLADTAGAVTVRRFTQKVNGPSAVTYVGKGKLEEIKQYIEDCAENEEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQIRNIENELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRITLLKQRLLEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R L V++VGYTN GKST+++ LS S++F++ +LFATLD +
Sbjct: 203 KQKTTQRKNRGR--------LIRVSLVGYTNVGKSTIMNLLSKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVIENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDLSHPDFEEQIQV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
V + L +G +E+ +MI V+NKID + D + + + N + + K T +D
Sbjct: 315 VERTLADLGCNEK--PSMI-VFNKIDNYRWTEKDEDDLTPETRENITLEDLKKTWMARLD 371
Query: 457 VECI 460
C+
Sbjct: 372 ESCM 375
>gi|116689827|ref|YP_835450.1| small GTP-binding protein [Burkholderia cenocepacia HI2424]
gi|170733166|ref|YP_001765113.1| GTP-binding proten HflX [Burkholderia cenocepacia MC0-3]
gi|206560241|ref|YP_002231005.1| putative GTP-binding protein [Burkholderia cenocepacia J2315]
gi|116647916|gb|ABK08557.1| GTP-binding protein HflX [Burkholderia cenocepacia HI2424]
gi|169816408|gb|ACA90991.1| GTP-binding proten HflX [Burkholderia cenocepacia MC0-3]
gi|198036282|emb|CAR52178.1| putative GTP-binding protein [Burkholderia cenocepacia J2315]
Length = 395
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 182/333 (54%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 52 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + ++ ++ V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGA--DTIRQVL-VFNKIDA 320
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|430749974|ref|YP_007212882.1| GTP-binding protein HflX [Thermobacillus composti KWC4]
gi|430733939|gb|AGA57884.1| GTP-binding protein HflX [Thermobacillus composti KWC4]
Length = 428
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 181/330 (54%), Gaps = 35/330 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE ++ A+ G AIF + LSG Q RNLE ++DR LI++IF
Sbjct: 66 FLGKGKVEELRA---VAQELGATTAIF-DQELSGAQVRNLEEGLDLKIIDRTQLILDIFA 121
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E +Q ELA L Y RL RL G
Sbjct: 122 GRAKTREGIIQVELAQLSYLLPRLAGHGKNLSRLGGGIGTRGPG---------------- 165
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
ET+L+ RR I ER + L Q++EV R R+VQR RR+ G + VA+VGYTNA
Sbjct: 166 --ETKLETDRRHIRERIADLKRQLKEVVRHRSVQRERRRKTG------VTQVALVGYTNA 217
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFH 367
GKSTL+ L+++D++ + +LFATLDP ++ LP G +V+L+DTVGFI +LP +LV AF
Sbjct: 218 GKSTLLRELTNADVYVENQLFATLDPTSRAWTLPDGTEVVLTDTVGFIQNLPHELVAAFR 277
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TLEE EADL++HV+D ++P EE V ++L ++G + + I ++NKID E
Sbjct: 278 STLEEAAEADLILHVVDSSSPYREEQMAVVDRILTELGAGD---RPRIVLYNKIDLCTNE 334
Query: 428 MGDVEYIDGDD--ISNFSRAEDKDTTSEPV 455
+ DGD +S FS A D++ V
Sbjct: 335 ELHLLRRDGDALLVSAFS-ASDREAIGRAV 363
>gi|387792553|ref|YP_006257618.1| GTP-binding protein HflX [Solitalea canadensis DSM 3403]
gi|379655386|gb|AFD08442.1| GTP-binding protein HflX [Solitalea canadensis DSM 3403]
Length = 396
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 173/306 (56%), Gaps = 35/306 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGK-PVLDRVGLII 184
+ TF G G +E I ++ E+ D + + LS Q RNL R + + +LDR LI+
Sbjct: 59 SKTFVGSGKLEEIIEYVQAEEA----DMVIFDDELSPSQLRNLGREFKEIKILDRSNLIL 114
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
+IF A T +AK Q ELA Y RL R+ + R GG G
Sbjct: 115 DIFANRAQTAQAKTQVELAQYQYLLPRLTRM-----------------WTHLERQRGGIG 157
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GE++++ RR IL++ + L ++E++ + A QR R L VA+VG
Sbjct: 158 -MRGPGESQIETDRRIILDKIALLKERLEKIDKQNATQRKNRGE--------LVRVALVG 208
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVD 364
YTN GKST+++ LS S++F++ +LFATLD ++ +V+ + LLSDTVGFI LP LV+
Sbjct: 209 YTNVGKSTIMNMLSKSEVFAENKLFATLDTTVRKMVINNLPFLLSDTVGFIRKLPHHLVE 268
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
F +TL EV EAD+L+HV D + PN E+H TV + L+++G + K MI V+NKID +
Sbjct: 269 CFKSTLAEVREADILIHVADISHPNFEDHIITVNETLKELGARD---KEMITVFNKIDAY 325
Query: 425 DEEMGD 430
E GD
Sbjct: 326 KGE-GD 330
>gi|339498977|ref|YP_004697012.1| GTP-binding proten HflX [Spirochaeta caldaria DSM 7334]
gi|338833326|gb|AEJ18504.1| GTP-binding proten HflX [Spirochaeta caldaria DSM 7334]
Length = 423
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 132/335 (39%), Positives = 189/335 (56%), Gaps = 40/335 (11%)
Query: 130 FGPGTVETIKCHINGAESKGEL--DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
G G E I AE EL D + + ++ QQRN E G +DR LII+IF
Sbjct: 64 MGLGKAEEI------AERARELGVDCLIFDQDITPSQQRNWEELTGISAIDRQELIIQIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T+EA+LQ ELA L + RL + +R RG GR
Sbjct: 118 ASRARTREAELQIELAQLKHSLPRLT---------------HKYIDLSRQRG--GRYGTK 160
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR IL R L ++I+EVR+ R+ QR R + + T A+VGYTN
Sbjct: 161 GAGETKLELDRRSILRRIHQLEAEIKEVRQHRSTQRKKREKIP------IPTCALVGYTN 214
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
AGKS+L++A++++++ ++ +LFATLDP + + + G+ VLL+DTVGFI LP LVDAF
Sbjct: 215 AGKSSLLNAMTNAEVLAEDKLFATLDPTTRRLEIGRGQPVLLTDTVGFIRRLPHDLVDAF 274
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID--YH 424
HATLEE AD+L+ VLD P+++ H T L VL+++G E+ +I + NKID
Sbjct: 275 HATLEEAALADILLIVLDAADPDVDRHYDTTLGVLKELGA--EQTPKII-ILNKIDKVSS 331
Query: 425 DEEMGDVE--YIDGDDISNFSRAEDKDTTSEPVDV 457
E + ++E Y D IS +R DT + +D+
Sbjct: 332 PERLQELEKQYSDSVSISALNRT-GLDTLARRIDL 365
>gi|403382132|ref|ZP_10924189.1| GTP-binding protein [Paenibacillus sp. JC66]
Length = 420
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 115/277 (41%), Positives = 162/277 (58%), Gaps = 33/277 (11%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+ N LS Q RNLE V+DR LI++IF A T+EA+LQ E+A L Y+ RLV
Sbjct: 76 VLFNDELSPSQIRNLEADLDCMVIDRTMLILDIFAERAKTREAQLQVEIAELQYQLPRLV 135
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
+R GR +G G+G + GAGET+L+L RRRI E+ + L Q+E
Sbjct: 136 GLRESLGR--------------QGGGAGLKN--RGAGETKLELDRRRIEEKITVLSKQLE 179
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSD-------SDLFSDA 326
E+ R VQR R + + L + A+VGYTNAGKSTL++A+ + +F
Sbjct: 180 ELVAQRQVQRKQRHK------QALPSAALVGYTNAGKSTLMNAMMEVFEPAKIKQVFEKD 233
Query: 327 RLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDC 385
LFATL+ ++S+ LP K +LL+DTVGF+S LP LV AF +TLEEV EADLL+HV+DC
Sbjct: 234 MLFATLETSVRSITLPDNKSLLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDC 293
Query: 386 TAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+ P+ +E + L ++GV + ++ +NK D
Sbjct: 294 SNPHYKEMMEITERTLAEIGVKD---IPILYAYNKAD 327
>gi|304382175|ref|ZP_07364686.1| GTP-binding protein HflX [Prevotella marshii DSM 16973]
gi|304336773|gb|EFM02998.1| GTP-binding protein HflX [Prevotella marshii DSM 16973]
Length = 417
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 181/334 (54%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + Y D F + V V+ + K T+ G G +E IK +I + E++
Sbjct: 26 EAKTKEYLDELQFLADTAGAVTVKRFTQKLAAPSQVTYVGKGKLEEIKQYIIDREEAEHP 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E+ +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQMRNIEKELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL+R + L
Sbjct: 146 RLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRITLLKQ 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ R + QR R R + VA+VGYTN GKSTL++ +S S++F++ +LFA
Sbjct: 197 RLVEIDRQKTTQRKNRGR--------MIRVALVGYTNVGKSTLMNLISKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ VV+ + LL+DTVGFI LP LV++F +TL+EV EAD+L+HV+D + P+
Sbjct: 249 TLDTTVRKVVIENLPFLLADTVGFIRKLPTDLVESFKSTLDEVREADMLLHVVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V L+ +G SE K I V+NKID +
Sbjct: 309 EEQIRVVENTLKDLGCSE---KPSIIVFNKIDAY 339
>gi|334703391|ref|ZP_08519257.1| GTP-binding protein HflX [Aeromonas caviae Ae398]
Length = 428
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E I + ++ D + N L+ Q+RNLER + V+DR GLI++
Sbjct: 54 AKFFVGSGKAEEIASQVQMLDA----DVVIFNHALTPAQERNLERLFQCRVVDRTGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER +L ++++V + R R AR R+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKAILRRLDKVAKQREQGRRARNRNE------VPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+D+ +++ +LFATLDP L+ +V+ G V+L+DTVGFI LP LV
Sbjct: 206 TNAGKSTLFNQLTDASVYAADQLFATLDPTLRKLVIQDVGDVILADTVGFIRHLPHDLVA 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATL+E EADLL+HV+DC ++E+ +V +VL ++ E + + + NKID
Sbjct: 266 AFKATLQETREADLLLHVVDCADEQMQENIESVQRVLAEI---EADDRPQLMICNKID 320
>gi|365875684|ref|ZP_09415210.1| GTP-binding protein HflX [Elizabethkingia anophelis Ag1]
gi|442587450|ref|ZP_21006267.1| GTP-binding protein HflX [Elizabethkingia anophelis R26]
gi|365756529|gb|EHM98442.1| GTP-binding protein HflX [Elizabethkingia anophelis Ag1]
gi|442562891|gb|ELR80109.1| GTP-binding protein HflX [Elizabethkingia anophelis R26]
Length = 405
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 172/303 (56%), Gaps = 33/303 (10%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K + + TF G G E I+ ++ + E+ + + LS Q +NLER +LDR
Sbjct: 52 KMSQPDSKTFVGKGKAEEIRDYV----KENEIGTVIFDDELSPSQLKNLERDIEVKILDR 107
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI++IF A T A+ Q ELA Y RL R+ + R
Sbjct: 108 TNLILDIFAQRAQTSYARTQVELAQYEYLLPRLTRMW-----------------THLERQ 150
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG G + G GETE++ RR I +R S L +++ + R A QR R + +
Sbjct: 151 RGGIG-MRGPGETEIETDRRIIRDRISLLKDKLKTIDRQMATQRNNRGK--------MVR 201
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLP 359
VA+VGYTN GKSTL+++LS S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP
Sbjct: 202 VALVGYTNVGKSTLMNSLSKSEVFAENKLFATLDTTVRKVVIGNLPFLLTDTVGFIRKLP 261
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
QLV++F +TL+EV EADLL+HV+D + + E+H +V ++LQ++ + K ++ V+N
Sbjct: 262 TQLVESFKSTLDEVREADLLIHVVDISHESFEDHVNSVNEILQEIDAHK---KPVLMVFN 318
Query: 420 KID 422
KID
Sbjct: 319 KID 321
>gi|115351795|ref|YP_773634.1| small GTP-binding protein [Burkholderia ambifaria AMMD]
gi|115281783|gb|ABI87300.1| GTP-binding protein HflX [Burkholderia ambifaria AMMD]
Length = 396
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 179/333 (53%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 52 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGADTIR---QVLVFNKIDA 320
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|400289084|ref|ZP_10791116.1| GTP - binding protein, phage lambda cII repressor [Psychrobacter
sp. PAMC 21119]
Length = 486
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 175/302 (57%), Gaps = 33/302 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G I + ++ D + N LS Q+RN+E VLDR GLI++
Sbjct: 56 AKYFVGSGKAAEIAELVREHDA----DIVLFNHSLSPSQERNIEALVQCRVLDRTGLILD 111
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 112 IFAQRARTYEGKLQVELAQLNHLSTRLVR----------GWTHLE-------RQKGGIG- 153
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + L S++E+VR+TRA RA R++ SD + T+++VGY
Sbjct: 154 LRGPGETQLETDRRLLQTRVNQLKSKLEKVRQTRAQGRARRQK---SD---VPTISLVGY 207
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L D ++++ +LFATLDP L+ + G+V+L DTVGF+ LP +LV+
Sbjct: 208 TNAGKSTLFNRLVDENIYAADKLFATLDPTLRRLDWQGVGRVVLVDTVGFVRHLPHELVE 267
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+FHATLEE +EADLL+HV+D ++ ++ E V VL ++ + ++ V+NKID
Sbjct: 268 SFHATLEETLEADLLLHVIDSSSEDMHEQIQAVKDVLAEI----DNDVPVLNVYNKIDLT 323
Query: 425 DE 426
DE
Sbjct: 324 DE 325
>gi|15600136|ref|NP_253630.1| GTP-binding protein [Pseudomonas aeruginosa PAO1]
gi|392986619|ref|YP_006485206.1| GTP-binding protein HflX [Pseudomonas aeruginosa DK2]
gi|418586315|ref|ZP_13150358.1| GTP-binding protein HflX [Pseudomonas aeruginosa MPAO1/P1]
gi|418592149|ref|ZP_13156025.1| GTP-binding protein HflX [Pseudomonas aeruginosa MPAO1/P2]
gi|419751812|ref|ZP_14278222.1| GTP-binding protein HflX [Pseudomonas aeruginosa PADK2_CF510]
gi|420142139|ref|ZP_14649766.1| GTP-binding protein [Pseudomonas aeruginosa CIG1]
gi|421156462|ref|ZP_15615908.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 14886]
gi|421163541|ref|ZP_15622248.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 25324]
gi|421183022|ref|ZP_15640489.1| GTP-binding protein [Pseudomonas aeruginosa E2]
gi|421519507|ref|ZP_15966178.1| GTP-binding protein HflX [Pseudomonas aeruginosa PAO579]
gi|9951223|gb|AAG08328.1|AE004907_6 probable GTP-binding protein [Pseudomonas aeruginosa PAO1]
gi|375043321|gb|EHS35950.1| GTP-binding protein HflX [Pseudomonas aeruginosa MPAO1/P1]
gi|375048975|gb|EHS41486.1| GTP-binding protein HflX [Pseudomonas aeruginosa MPAO1/P2]
gi|384401888|gb|EIE48241.1| GTP-binding protein HflX [Pseudomonas aeruginosa PADK2_CF510]
gi|392322124|gb|AFM67504.1| GTP-binding protein HflX [Pseudomonas aeruginosa DK2]
gi|403245107|gb|EJY58936.1| GTP-binding protein [Pseudomonas aeruginosa CIG1]
gi|404345426|gb|EJZ71778.1| GTP-binding protein HflX [Pseudomonas aeruginosa PAO579]
gi|404519006|gb|EKA29795.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 14886]
gi|404528427|gb|EKA38520.1| GTP-binding protein [Pseudomonas aeruginosa ATCC 25324]
gi|404540938|gb|EKA50318.1| GTP-binding protein [Pseudomonas aeruginosa E2]
Length = 433
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/354 (38%), Positives = 194/354 (54%), Gaps = 39/354 (11%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ + A G G VE + + AE+ ++ + N L+ Q+RNLERA+ VL
Sbjct: 47 SVSRHQPSAKYLIGSGKVEELHDLVK-AEN---VELVIFNHTLTPSQERNLERAFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++E+VR R R R+R +D +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKR---AD---I 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
V++VGYTNAGKSTL ++L+ S++++ +LFATLDP L+ + L G V+L+DTVGFI
Sbjct: 199 PAVSLVGYTNAGKSTLFNSLTASEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFIR 258
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV+AF ATLEE ADLL+HV+D P + VL VL ++G +E M+E
Sbjct: 259 HLPHKLVEAFRATLEESSNADLLLHVIDAYEPERDAQVEQVLAVLGEIGANE---LPMLE 315
Query: 417 VWNKIDYHDEEMGDVE-YIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDD 467
V+NK+D + VE +I DD R T E +D+ + I G+D
Sbjct: 316 VYNKVDL----LPSVEPHIQRDDSGKPVRVWLSAQTGEGLDLLRQAIAELLGED 365
>gi|167836403|ref|ZP_02463286.1| GTP-binding protein HflX [Burkholderia thailandensis MSMB43]
Length = 392
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 179/335 (53%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 52 AAMFVGSGKAEELRLACEAN------DVEIVIFNHALAPAQQRNLERMLNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++ +RR QR R R G +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHHTQRRQRARSGA------MSVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 261
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V VL+++G + + V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIR---QVLVFNKI 318
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E ++ D+ N SR T + +D
Sbjct: 319 DAVPELAARGGAVERDEYGNISRVFLSARTGQGLD 353
>gi|325859643|ref|ZP_08172776.1| GTP-binding protein HflX [Prevotella denticola CRIS 18C-A]
gi|327314434|ref|YP_004329871.1| GTP-binding protein HflX [Prevotella denticola F0289]
gi|325482923|gb|EGC85923.1| GTP-binding protein HflX [Prevotella denticola CRIS 18C-A]
gi|326944940|gb|AEA20825.1| GTP-binding protein HflX [Prevotella denticola F0289]
Length = 415
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 180/329 (54%), Gaps = 22/329 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + A T+ G G +E IK +I E + + + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVNGPSAVTYVGKGKLEEIKEYIKQKEDEDDPVGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQMRNIEHELSVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMSLLKQRLAEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
R + QR R R L VA+VGYTN GKST ++ L+ S++F++ +LFATLD +
Sbjct: 203 RQKNTQRKNRGR--------LIRVALVGYTNVGKSTTMNLLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+H++D + P+ EE
Sbjct: 255 RKVVVENLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHIVDISHPDFEEQIQV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
V + L +G +++ +MI V+NKID YH
Sbjct: 315 VNKTLADLGCADK--PSMI-VFNKIDNYH 340
>gi|330719417|ref|ZP_08314017.1| GTP-binding protein HflX [Leuconostoc fallax KCTC 3537]
Length = 417
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 188/349 (53%), Gaps = 46/349 (13%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G V + H ++D I N L+ Q RNLE+ G V+DR GLI++IF
Sbjct: 44 TYFGKGKVAELADH----AKTYDVDMIIANDELTPSQIRNLEQETGTTVVDRTGLILDIF 99
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TK AKLQ +LA L Y+ RL R + T + + G+GG GF S
Sbjct: 100 AQRAQTKNAKLQVQLARLQYQLPRL--------RTSMSITLDQQT------GAGGGGFTS 145
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L+ RRRI ++ H+ ++ ++ ++ R+A+R+H L VA+VGYT
Sbjct: 146 RGAGETKLEQSRRRITKQMVHIRQELADIEKSEGT-RSAQRQHNQ-----LPNVALVGYT 199
Query: 307 NAGKSTLVSAL-----------SDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGF 354
NAGKST+++ L + +F LFATL+ ++ + LP + LLSDTVGF
Sbjct: 200 NAGKSTIMNQLLHRFGVGATSGTTKQVFEKDMLFATLNTTVRQLTLPDKHQFLLSDTVGF 259
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+S LP L++AF +TL E ADLL++++D + N ++ T + L Q+GVS + M
Sbjct: 260 VSKLPHNLIEAFKSTLSEAANADLLLNIVDISDENYQDMIHTTQETLAQIGVSG---RPM 316
Query: 415 IEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNY 463
I V+NK D + I GD+ S DTTS+ V ++ I +
Sbjct: 317 ITVFNKADKAGLPFPE---ITGDNTITISAL---DTTSQDVLIDLIKKH 359
>gi|440802114|gb|ELR23053.1| GTPbinding protein HflX, putative [Acanthamoeba castellanii str.
Neff]
Length = 594
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 195/375 (52%), Gaps = 33/375 (8%)
Query: 61 PPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQR--DGYFDTDFFDKELPPHV------ 112
PPR+ +V P ++ + + LA EE++ G D KE V
Sbjct: 131 PPRVCVVHPYMRNTVYADKRKRRLSLLAEREEEEQVCRGQDHPDLRLKEAVALVEALEWP 190
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V + L F G G + ++ ++K + L+ Q + L +
Sbjct: 191 VEDSMYLTVNTVNPSHFLGKGKIAELR---QACQAKRADVVVMDTNSLTPAQGQKLAKML 247
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR LI+EIF A ++E++LQ ELA L YK L ++
Sbjct: 248 GTRVMDRYRLILEIFAQRAQSEESRLQVELAGLAYKSVHL-------------KSAMESK 294
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
A+ RG G F+SGAGET L+++RR ++ R + +++E +++TR + R +R++
Sbjct: 295 HLAQQRGGGA--FLSGAGETNLEIERRHLVVREKKIKARLEVLQKTRKLHRESRKK---- 348
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLS-DT 351
+ + T+A++GYTNAGKS L++ L + L S +LFA+L ++ + LPSG L+ DT
Sbjct: 349 --QDIPTIAILGYTNAGKSALLNRLCGTSLVSQNQLFASLHTFMRKIELPSGCCALAADT 406
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFIS+LP LV FH+TLEE+ AD+L+HV D T E + V +V++++G+ +
Sbjct: 407 VGFISNLPHGLVAPFHSTLEEIGSADVLLHVRDITNAETEMQKANVHKVMKEIGLDTDPD 466
Query: 412 KNMIEVWNKIDYHDE 426
+EVWNKID D+
Sbjct: 467 TQHLEVWNKIDLMDD 481
>gi|313886207|ref|ZP_07819937.1| GTP-binding protein HflX [Porphyromonas asaccharolytica
PR426713P-I]
gi|332299693|ref|YP_004441614.1| GTP-binding protein HflX [Porphyromonas asaccharolytica DSM 20707]
gi|312924386|gb|EFR35165.1| GTP-binding protein HflX [Porphyromonas asaccharolytica
PR426713P-I]
gi|332176756|gb|AEE12446.1| GTP-binding protein HflX [Porphyromonas asaccharolytica DSM 20707]
Length = 411
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 196/360 (54%), Gaps = 48/360 (13%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ I +++ E AIF + L+ Q RN+ER G +LDR LI++IF
Sbjct: 62 TFVGKGKLDEIAEYVSAHEVGL---AIFDDE-LAPNQLRNIERQLGIRILDRTSLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q E+A Y RL R+ + R GG +
Sbjct: 118 ATRAQTAHAKTQVEMAQYQYMLPRLTRL-----------------WTHLERQRGGNIGLR 160
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR IL + S L Q++++ + ++VQR R + + VA+VGYTN
Sbjct: 161 GPGETQLETDRRIILRKISQLKEQLKKIDKQKSVQRQNRGK--------MVRVALVGYTN 212
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ L+ SD+F++ +LFATLD ++ VVL + LL+DTVGFI LP QLV++F
Sbjct: 213 VGKSTLMNVLAKSDIFAENKLFATLDTTVRKVVLGNLPFLLADTVGFIRKLPTQLVESFK 272
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV E+DL++HV+D + P E+ V + L+++ +K + I V+NKID +
Sbjct: 273 STLDEVRESDLILHVVDISHPEFEDQIAVVTETLREIEALGDKPQ--ILVFNKIDAY--- 327
Query: 428 MGDVEYI--DGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGFVSEDLGESMNK 485
++I D DD++ ++ + T E ++ + G D F+S GE M++
Sbjct: 328 ----QHIPKDPDDLTPATKL---NRTREELEKSWMARMGNDCV-----FISARTGEGMDE 375
>gi|430762038|ref|YP_007217895.1| GTP-binding protein HflX [Thioalkalivibrio nitratireducens DSM
14787]
gi|430011662|gb|AGA34414.1| GTP-binding protein HflX [Thioalkalivibrio nitratireducens DSM
14787]
Length = 454
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 169/295 (57%), Gaps = 32/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G + I + E+ G AIF N LS Q+RNLER VLDR GLI++IF
Sbjct: 58 FVGSGKADEIAAAV---EATGADLAIF-NHPLSPSQERNLERHLKCRVLDRSGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 114 QRARSHEGKLQVELAQLRHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R H+ ++E+V+R R R ARRR+ TVA+VGYTNA
Sbjct: 156 PGETQLETDRRLLAARIKHIERRLEKVQRAREQGRQARRRNE------TPTVALVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+++ +++ +LFATLDP L+ + L P V+L+DTVGF+ DLP +L+ AF
Sbjct: 210 GKSTLFNRLTEAQVYAADQLFATLDPTLRRLDLAPHQSVILADTVGFVRDLPHELIAAFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATL E EA LL+HV+D + P E H V VL+++G E + V+NKID
Sbjct: 270 ATLTETREAALLLHVIDASDPEREVHVEQVESVLEEIGAGEVPIWC---VYNKID 321
>gi|92113404|ref|YP_573332.1| HSR1-like GTP-binding protein [Chromohalobacter salexigens DSM
3043]
gi|91796494|gb|ABE58633.1| GTP-binding protein HflX [Chromohalobacter salexigens DSM 3043]
Length = 439
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 171/298 (57%), Gaps = 36/298 (12%)
Query: 128 TFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
TF G G +E I+ ++GA D + N LS Q+RNLERA VLDR GLI++
Sbjct: 57 TFIGSGKLEEIREIRELHGA------DIVIFNHALSPSQERNLERALKSRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L Y +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEYMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++E+VR R R AR R + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLGARIKAIHKRLEKVRTQRDQNRRARARA------EIPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSV-VLPSGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL++S++++ +LFATLDP L+ + V G V+L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTESEVYAADQLFATLDPTLRRLNVADVGPVVLADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+F ATL+E EA LLVHV+D P+ + + V VL+++G + + V NKID
Sbjct: 267 SFRATLQEAAEASLLVHVIDAADPDRDFNVAQVDTVLEEIGAGD---VPQLLVMNKID 321
>gi|373457055|ref|ZP_09548822.1| GTP-binding proten HflX [Caldithrix abyssi DSM 13497]
gi|371718719|gb|EHO40490.1| GTP-binding proten HflX [Caldithrix abyssi DSM 13497]
Length = 424
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 169/295 (57%), Gaps = 34/295 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I ++ S ++D + + LS Q RN+E G V+DR LI++IF
Sbjct: 63 FIGKGKIEEIAEYV----SFNDIDLLIFDDELSPAQVRNIENLTGIKVIDRTALILDIFA 118
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA T AK+Q ELA L Y RL R + + +S R GG G G
Sbjct: 119 LHARTNMAKVQVELAQLNYYLPRLTR--------------QWQHLS---RQVGGIG-TKG 160
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + +R SHL ++E++ VQR R+ L A++GYTNA
Sbjct: 161 PGETQLETDRRLVRQRISHLKEKLEKIAHQNEVQRQQRQE--------LFRAALIGYTNA 212
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++AL+++ + + +LFATLD ++ + L P+ +LLSDTVGFI LP LV +F
Sbjct: 213 GKSTLMNALTNARVLIEDQLFATLDTTVRRLALNPTTTILLSDTVGFIRKLPHHLVASFQ 272
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
TL E +EADLL+HV+D T P+ E TV Q+L ++ ++E+K + V+NK+D
Sbjct: 273 TTLAEAIEADLLIHVVDVTHPHFEAQVKTVNQILDELHLNEKK---RLLVFNKVD 324
>gi|289207682|ref|YP_003459748.1| GTP-binding proten HflX [Thioalkalivibrio sp. K90mix]
gi|288943313|gb|ADC71012.1| GTP-binding proten HflX [Thioalkalivibrio sp. K90mix]
Length = 441
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 173/314 (55%), Gaps = 34/314 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G + I+ + E+ G D + N LS Q+RNLER VLDR GLI++IF
Sbjct: 59 FVGAGKADEIRAAV---EAHGA-DVVIFNHALSPSQERNLERHLQCRVLDRAGLILDIFA 114
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 115 QRARSHEGKLQVELAQLRHMATRLVR----------GWTHLE-------RQKGGIG-LRG 156
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R H+ ++E+V RTR R AR R+ + TV++VGYTNA
Sbjct: 157 PGETQLETDRRLLAARIKHIERRLEKVERTREQGRQARLRNE------IPTVSLVGYTNA 210
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ SD++ +LFATLDP L+ + L P ++L+DTVGF+ DLP +LV AF
Sbjct: 211 GKSTLFNRLTHSDVYEADQLFATLDPTLRRLDLAPHQSLILADTVGFVRDLPHELVAAFK 270
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE- 426
ATL E EA LL+HV+D P E V VL+++G + V+NKID +
Sbjct: 271 ATLTETREAALLLHVIDAADPEREARIRQVEAVLEEIGAQD---VPCWRVYNKIDRLEST 327
Query: 427 -EMGDVEYIDGDDI 439
+ + + GDD+
Sbjct: 328 PDAAEARFGSGDDV 341
>gi|254238342|ref|ZP_04931665.1| hypothetical protein PACG_04477 [Pseudomonas aeruginosa C3719]
gi|126170273|gb|EAZ55784.1| hypothetical protein PACG_04477 [Pseudomonas aeruginosa C3719]
Length = 433
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 191/346 (55%), Gaps = 39/346 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE + + AE+ ++ + N L+ Q+RNLERA+ VLDR GLI++
Sbjct: 55 AKYLIGSGKVEELHDLVK-AEN---VELVIFNHTLTPSQERNLERAFECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++E+VR R R R+R +D + V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKR---AD---IPAVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL ++L+ S++++ +LFATLDP L+ + L G V+L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNSLTASEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATLEE ADLL+HV+D P + VL VL ++G +E M+EV+NK+D
Sbjct: 267 AFRATLEESSNADLLLHVIDAYEPERDAQVEQVLAVLGEIGANE---LPMLEVYNKVDL- 322
Query: 425 DEEMGDVE-YIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDD 467
+ VE +I DD R T E +D+ + I G+D
Sbjct: 323 ---LPSVEPHIQRDDSGKPVRVWLSAQTGEGLDLLRQAIAELLGED 365
>gi|387133752|ref|YP_006299724.1| GTP-binding protein HflX [Prevotella intermedia 17]
gi|386376600|gb|AFJ08164.1| GTP-binding protein HflX [Prevotella intermedia 17]
Length = 420
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 198/378 (52%), Gaps = 22/378 (5%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGE-LDAIFV 156
Y D F + V V+ + + G ++ G G + IK +I E + E + +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQRVGGPNMTSYVGKGKLAEIKEYIKAKEDEDEPIGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQLRNIENELQVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL+R + L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILQRMTLLKQRLVEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R L VA+VGYTN GKST+++ L+ S++F++ +LFATLD +
Sbjct: 203 KQKITQRKNRGR--------LIRVALVGYTNVGKSTIMNMLAKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VVL + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ EE
Sbjct: 255 RKVVLQNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDISHPDFEEQIQV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
V + L+ + +E+ +MI ++NKID + E + + + N S E K T ++
Sbjct: 315 VTETLKDLECAEK--PSMI-IFNKIDNYTWEEKEEDDLTPMSKENVSLEELKRTWMAKLN 371
Query: 457 VECIDNYGGDDADNNDGF 474
+C+ + +N D F
Sbjct: 372 DDCL-FISAKEKENIDEF 388
>gi|334882756|emb|CCB83813.1| GTPase [Lactobacillus pentosus MP-10]
Length = 431
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 168/303 (55%), Gaps = 31/303 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TFFG G V IK + +L + +NA L+ Q RNLE ++DR GLI+EIF
Sbjct: 57 TFFGKGKVVEIK----EVAAANDLHIMVINADLTPSQVRNLEEQTDIQIIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL R + + + +A G G G
Sbjct: 113 GNRARSKEAKLQVKIAQLQYQLPRL--------RTSISNRLDQQAGAAAGGGGGFTN--R 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR I +R SH +++E+ + V+RA R D GL VA+VGYTN
Sbjct: 163 GAGETQLELNRRTIQDRISHAKHELKELNKDEVVRRAQR------DKAGLPNVALVGYTN 216
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKST ++ L D +F LFATLD ++ + P K +LLSDTVGF+SDLP
Sbjct: 217 AGKSTTMNGLVKLFGKGEDKQVFEKDMLFATLDTSIRQLTFPDNKQLLLSDTVGFVSDLP 276
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
L++AF +TL E ADLL+ V+D P+ +E T + L+++GV + MI +N
Sbjct: 277 HNLINAFRSTLAEAANADLLIQVIDYADPHYKEMMATTEKTLKEIGVHDVP---MIYAFN 333
Query: 420 KID 422
K D
Sbjct: 334 KAD 336
>gi|333029796|ref|ZP_08457857.1| GTP-binding proten HflX [Bacteroides coprosuis DSM 18011]
gi|332740393|gb|EGJ70875.1| GTP-binding proten HflX [Bacteroides coprosuis DSM 18011]
Length = 420
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 188/356 (52%), Gaps = 34/356 (9%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
E + D Y + F + VV + K K T+ G G +E I+ ++ E+
Sbjct: 26 ERKTDEYLEELEFLADTAGAEVVGKFTQKLDKENPTTYVGKGKLEEIRDYVKD----HEV 81
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
+ + LS Q RN+E+ +LDR LI++IF A T AK Q ELA Y R
Sbjct: 82 GMVIFDDELSAKQIRNIEKELQVKILDRTSLILDIFAMRAQTASAKTQVELAQYQYMLPR 141
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L R+ T G G GG + G GET+L++ +R I +R S L Q
Sbjct: 142 LTRLW----------THLERQAGGSGSGKGGSVGLRGPGETQLEMDKRIIGDRISFLKKQ 191
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
+E++ R +A QR R R L VA+VGYTN GKST+++ L+ S++F++ +LFAT
Sbjct: 192 LEKIDRQKATQRKNRGR--------LIRVALVGYTNVGKSTIMNMLAKSEVFAEDKLFAT 243
Query: 332 LDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLE 391
LD ++ VV+ + LLSDTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+ E
Sbjct: 244 LDTTVRKVVVGNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPSFE 303
Query: 392 EHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYI--DGDDISNFSRA 445
+ V Q L + S+ K V+NKID + YI D DD++ +RA
Sbjct: 304 DQIKVVNQTLADIDSSD---KPTFLVFNKIDAY-------SYIKKDEDDLTPITRA 349
>gi|406838722|ref|ZP_11098316.1| GTP-binding proten HflX [Lactobacillus vini DSM 20605]
Length = 416
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 168/305 (55%), Gaps = 36/305 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+ G G V + I ++ +A+ VNA LS Q RN+E PV+DR LI+E
Sbjct: 47 AGTYLGSGKVAELAAAIQANQA----EALLVNAQLSPTQLRNIESLVKVPVIDRTELILE 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF+ A TK A+LQ E+A L Y+ RL RV G F + + + GG+G
Sbjct: 103 IFSRRAQTKRAQLQVEIARLKYQLPRL-RVSG------FNKLDQ--------QNGGGQGA 147
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GAGET+ +L +R + +R + L Q++E+ + Q AR+R GL +VA+VGY
Sbjct: 148 NRGAGETQHELTKRTLQKRITQLTHQLQELATEQTTQSRARKR------SGLPSVALVGY 201
Query: 306 TNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISD 357
TNAGKST + L + + +LFATLD ++ + P K +LLSDTVGFIS
Sbjct: 202 TNAGKSTTFNGLVKLFGEKTAHQVLVKDQLFATLDTSIRRLTFPDQKALLLSDTVGFISQ 261
Query: 358 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 417
LP L++AF TLE V++ADLLV V+DC+ P ++ Q LQ++G MI
Sbjct: 262 LPADLLEAFKTTLETVLDADLLVQVVDCSHPEHQKMIAATNQTLQEIGADAIP---MIYA 318
Query: 418 WNKID 422
+N+ D
Sbjct: 319 YNQAD 323
>gi|262379008|ref|ZP_06072165.1| GTP-binding protein HflX [Acinetobacter radioresistens SH164]
gi|262300293|gb|EEY88205.1| GTP-binding protein HflX [Acinetobacter radioresistens SH164]
Length = 446
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 172/299 (57%), Gaps = 33/299 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I + E +D + + LS Q+RNLER V+DR GLI++IF
Sbjct: 58 FIGSGKAEEIAELVKTEE----IDLVIFDHSLSPAQERNLERVMQCRVIDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLEHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L+ RR + R L ++E+VR+TR RAAR++ + TV++VGYTNA
Sbjct: 156 PGESQLETDRRLLRIRMGQLKDKLEKVRQTRMQGRAARQK------AAIPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+++++++ +LFATLDP L+ + G ++L+DTVGF+ +LP LV++F
Sbjct: 210 GKSTLFNILANTEVYAANQLFATLDPTLRRLEWDGIGSLVLADTVGFVRNLPHSLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEE +EA LL+HV+D + P++ E V VL+++G L+ V+NKID E
Sbjct: 270 ATLEETLEATLLLHVIDSSTPDMMEQIDAVESVLKEIGADVPVLR----VYNKIDVSGE 324
>gi|449483705|ref|XP_002195101.2| PREDICTED: putative GTP-binding protein 6 [Taeniopygia guttata]
Length = 478
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 192/357 (53%), Gaps = 46/357 (12%)
Query: 69 PRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADT 128
P+ P T + ++ EA+ L ++L+ + DK + P +NP+ K
Sbjct: 64 PQKSPLTTAELQIAEAVALVDTLQ-------NWTVLDKIIIP---TKNPNKK-------F 106
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
FG G + + I + + A+F+N +S + ++ LE AWG PV DR +++ IF
Sbjct: 107 VFGKGNFQVLTEKI---KKLPHVTAVFLNVERISSLTKKELEGAWGVPVFDRYTVVLHIF 163
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+A TKEAKLQ LA + +S L +S R + GG +I
Sbjct: 164 RCNARTKEAKLQIALAEIPLLRSNL-----------------KNELSQRDQQRGGSRYIM 206
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G+GET L+ Q R + ER + + +E++RR RA+ RA RR+ V+V+GYTN
Sbjct: 207 GSGETFLETQNRVLKERELKIRNALEKLRRKRALLRAQRRKCE------FPMVSVMGYTN 260
Query: 308 AGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDA 365
+GK+TL+ AL+ ++ L +LFATLD + LPS V+ DT+GF++DLP LV++
Sbjct: 261 SGKTTLIKALTGEAGLQPRDQLFATLDITAHAGYLPSHMAVIYVDTIGFLTDLPHNLVES 320
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
F ATLEEV +DL+VHV D T P + TVL VL+ + + L +M+EV NK+D
Sbjct: 321 FSATLEEVAYSDLIVHVRDITHPETILQKATVLSVLRNLNLPSHLLDSMVEVHNKVD 377
>gi|421466090|ref|ZP_15914776.1| GTP-binding protein HflX [Acinetobacter radioresistens WC-A-157]
gi|421855757|ref|ZP_16288132.1| GTP-binding protein HflX [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|400203601|gb|EJO34587.1| GTP-binding protein HflX [Acinetobacter radioresistens WC-A-157]
gi|403188766|dbj|GAB74333.1| GTP-binding protein HflX [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 446
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 172/299 (57%), Gaps = 33/299 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I + E +D + + LS Q+RNLER V+DR GLI++IF
Sbjct: 58 FIGSGKAEEIAELVKTEE----IDLVIFDHSLSPAQERNLERVMQCRVIDRTGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 114 QRARTHEGKLQVELAQLEHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L+ RR + R L ++E+VR+TR RAAR++ + TV++VGYTNA
Sbjct: 156 PGESQLETDRRLLRIRMGQLKDKLEKVRQTRMQGRAARQK------AAIPTVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+++++++ +LFATLDP L+ + G ++L+DTVGF+ +LP LV++F
Sbjct: 210 GKSTLFNILANTEVYAANQLFATLDPTLRRLEWDGIGSLVLADTVGFVRNLPHSLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEE +EA LL+HV+D + P++ E V VL+++G L+ V+NKID E
Sbjct: 270 ATLEETLEATLLLHVIDSSTPDMMEQIDAVESVLKEIGADVPVLR----VYNKIDVSGE 324
>gi|269837593|ref|YP_003319821.1| GTP-binding proten HflX [Sphaerobacter thermophilus DSM 20745]
gi|269786856|gb|ACZ38999.1| GTP-binding proten HflX [Sphaerobacter thermophilus DSM 20745]
Length = 433
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/312 (38%), Positives = 170/312 (54%), Gaps = 31/312 (9%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VVV + + + K + G G +E I+ + D + VN LS Q R+LE A
Sbjct: 45 VVVGSVTQRLPKPNMTHYVGSGKLEEIRA----LKDTLHYDVVLVNDELSPGQLRHLEDA 100
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI++IF A T E +LQ ELA L Y+ RL R+ R G G
Sbjct: 101 LDAKVIDRTALILDIFARRAQTHEGRLQVELAQLEYRLPRLTRMWTHLSRQAVGGVG--- 157
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
+ G GET+L++ RR+ R + + SQ++EV R R + R
Sbjct: 158 --------------LRGPGETQLEVDRRQARRRIALIKSQLQEVHRHRELYRNR------ 197
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSD 350
+ + +A+VGYTNAGKSTL++ L+D+ + ++ +LFATLDP + V LPSG+ VL++D
Sbjct: 198 RRRQNIPVIALVGYTNAGKSTLLNRLTDAGVLAEDKLFATLDPTTRRVTLPSGRTVLMTD 257
Query: 351 TVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
TVGFI +LP LV AF ATLEE++EA ++VHV+D T P E TV VL+ +G
Sbjct: 258 TVGFIHNLPTFLVAAFRATLEEILEASVIVHVMDVTHPKAAEQAETVRTVLEDLGADS-- 315
Query: 411 LKNMIEVWNKID 422
+ + NKID
Sbjct: 316 -RPKVTALNKID 326
>gi|113968943|ref|YP_732736.1| GTP-binding protein, HSR1-related [Shewanella sp. MR-4]
gi|114048919|ref|YP_739469.1| GTP-binding protein, HSR1-related [Shewanella sp. MR-7]
gi|113883627|gb|ABI37679.1| GTP-binding protein, HSR1-related [Shewanella sp. MR-4]
gi|113890361|gb|ABI44412.1| GTP-binding protein, HSR1-related [Shewanella sp. MR-7]
Length = 435
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/287 (41%), Positives = 166/287 (57%), Gaps = 33/287 (11%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
E + + N LS Q+RNLE+ VLDR LI++IF A T E KLQ ELA L +
Sbjct: 74 EANVVIFNHALSPAQERNLEQVCQCRVLDRTTLILDIFAQRARTHEGKLQVELAQLRHMS 133
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
+RLVR G T R GG G + G GET+L+ RR + R ++
Sbjct: 134 TRLVR----------GWTHLE-------RQKGGIG-LRGPGETQLETDRRLLRGRIKNIN 175
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
++E V + R R AR+R SD + TV++VGYTNAGKSTL +AL+ SD+++ +LF
Sbjct: 176 KRLERVDKQREQSRRARKR---SD---MPTVSLVGYTNAGKSTLFNALTSSDVYAADQLF 229
Query: 330 ATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
ATLDP L+ + LP G V+L+DTVGFI LP LV AF ATL+E +ADLL+H++DC N
Sbjct: 230 ATLDPTLRKLDLPDGAVILADTVGFIRHLPHDLVAAFKATLQETRQADLLLHIVDCADEN 289
Query: 390 LEEHRTTVLQVLQQV---GVSEEKLKNMIEVWNKIDYHDEEMGDVEY 433
+ ++ V VL+ + GV + + V NKID ++ +EY
Sbjct: 290 MADNFEQVQNVLEDIDAAGVMQ------LVVCNKIDLLEDVTPRIEY 330
>gi|383758603|ref|YP_005437588.1| GTP-binding protein HflX [Rubrivivax gelatinosus IL144]
gi|381379272|dbj|BAL96089.1| GTP-binding protein HflX [Rubrivivax gelatinosus IL144]
Length = 389
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 169/303 (55%), Gaps = 32/303 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + I+ + ++ G + + LS QQRNLER G PV DR LI++
Sbjct: 62 AALFVGSGKADEIRAMVGATQAHG----VIFDQTLSPAQQRNLERHLGVPVADRTSLILD 117
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A A + E KLQ ELA L Y +RLVR R + E + +
Sbjct: 118 IFAARAQSHEGKLQVELARLQYVATRLVR------RWSHLERQRGGIGTR---------- 161
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GE +++L RR I ER + +++E+V++ R QR AR R RG V++VGY
Sbjct: 162 -GGPGEAQIELDRRMIGERIKSVKARLEKVKQQRGTQRRARER------RGTFRVSLVGY 214
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL + ++ +LFATLD +S+ L V LSDTVGFI DLP +LV
Sbjct: 215 TNAGKSTLFNALVKARTYAADQLFATLDTTTRSLWLGEAGASVSLSDTVGFIRDLPHKLV 274
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
+AF ATL E +ADLL+HV+D +P L E + V +VL+++G + I V+NK D
Sbjct: 275 EAFEATLREAADADLLLHVVDAASPALLEQQAEVERVLEEIGAAGVP---QILVFNKCDL 331
Query: 424 HDE 426
+E
Sbjct: 332 LEE 334
>gi|392948035|ref|ZP_10313651.1| GTPase, HflX subfamily [Lactobacillus pentosus KCA1]
gi|392436685|gb|EIW14593.1| GTPase, HflX subfamily [Lactobacillus pentosus KCA1]
Length = 431
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 168/303 (55%), Gaps = 31/303 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TFFG G V IK + +L + +NA L+ Q RNLE ++DR GLI+EIF
Sbjct: 57 TFFGKGKVVEIK----EVAAANDLHIMVINADLTPSQVRNLEEQTDIQIIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL R + + + +A G G G
Sbjct: 113 GNRARSKEAKLQVKIAQLQYQLPRL--------RTSISNRLDQQAGAAAGGGGGFTN--R 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR I +R SH +++E+ + V+RA R D GL VA+VGYTN
Sbjct: 163 GAGETQLELNRRTIQDRISHAKHELKELNKDEVVRRAQR------DKAGLPNVALVGYTN 216
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKST ++ L D +F LFATLD ++ + P K +LLSDTVGF+SDLP
Sbjct: 217 AGKSTTMNGLVKLFGKGEDKQVFEKDMLFATLDTSIRQLTFPDNKQLLLSDTVGFVSDLP 276
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
L++AF +TL E ADLL+ V+D P+ +E T + L+++GV + MI +N
Sbjct: 277 HNLINAFRSTLAEAANADLLIQVIDYADPHYKEMMATTEKTLKEIGVHDVP---MIYAFN 333
Query: 420 KID 422
K D
Sbjct: 334 KAD 336
>gi|186476172|ref|YP_001857642.1| GTP-binding proten HflX [Burkholderia phymatum STM815]
gi|184192631|gb|ACC70596.1| GTP-binding proten HflX [Burkholderia phymatum STM815]
Length = 414
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 182/335 (54%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E ++ C N ++D + N L+ QQRNLER + V+DR LI
Sbjct: 52 AAMFVGSGKAEELRLACEAN------DVDIVIFNHALAPAQQRNLERTLNRRVVDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RLVR T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLATRLVRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L ++E++ R QR AR R+ R + +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKMLKGRLEKLGRQHGTQRRARARN-----RTM-SVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS--GKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGEEVGQIVVSDTVGFIRELPHQ 261
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ + V VL+++G + + V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLDQIDQVNDVLREIGADAIR---QVLVFNKI 318
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E + ++ D+ N SR T + +D
Sbjct: 319 DAVPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|339637390|emb|CCC16305.1| GTPase [Lactobacillus pentosus IG1]
Length = 431
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 168/303 (55%), Gaps = 31/303 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TFFG G V IK + +L + +NA L+ Q RNLE ++DR GLI+EIF
Sbjct: 57 TFFGKGKVVEIK----EVAAANDLHIMVINADLTPSQVRNLEEQTDIQIIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL R + + + +A G G G
Sbjct: 113 GNRARSKEAKLQVKIAQLQYQLPRL--------RTSISNRLDQQAGAAAGGGGGFTN--R 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR I +R SH +++E+ + V+RA R D GL VA+VGYTN
Sbjct: 163 GAGETQLELNRRTIQDRISHAKHELKELNKDEVVRRAQR------DKAGLPNVALVGYTN 216
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKST ++ L D +F LFATLD ++ + P K +LLSDTVGF+SDLP
Sbjct: 217 AGKSTTMNGLVKLFGKGEDKQVFEKDMLFATLDTSIRQLTFPDNKQLLLSDTVGFVSDLP 276
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
L++AF +TL E ADLL+ V+D P+ +E T + L+++GV + MI +N
Sbjct: 277 HNLINAFRSTLAEAANADLLIQVIDYADPHYKEMMATTEKTLKEIGVHDVP---MIYAFN 333
Query: 420 KID 422
K D
Sbjct: 334 KAD 336
>gi|310780551|ref|YP_003968883.1| GTP-binding proten HflX [Ilyobacter polytropus DSM 2926]
gi|309749874|gb|ADO84535.1| GTP-binding proten HflX [Ilyobacter polytropus DSM 2926]
Length = 441
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 170/309 (55%), Gaps = 40/309 (12%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K + T+ G G +E I+ + D + + LSGIQ RNLER G ++DR L
Sbjct: 62 KMESSTYMGKGKIEEIRDQ----AIRKNADMVIFDDELSGIQIRNLERIIGVEIIDRTSL 117
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A +KE KLQ ELA L Y+K RL+ G G L S G G G
Sbjct: 118 ILDIFGHRAKSKEGKLQVELAMLKYQKPRLI---GLGGEL-----------SRTGAGIGT 163
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
RG GET+L+L RR I +R S + ++EEV++ R VQR R+R + TVA+
Sbjct: 164 RGL----GETKLELDRRVISKRISDIEKELEEVKKQREVQRKQRKRT------SIPTVAL 213
Query: 303 VGYTNAGKSTLVSALSDSDLFSDAR--------LFATLDPRLKSVVLPSG-KVLLSDTVG 353
VGYTNAGKST+++ L + D R LFATLDP + + L + +L DTVG
Sbjct: 214 VGYTNAGKSTIMNHLMQMEEEEDTRTKSFVKDMLFATLDPFHRKIKLEDNLEFILIDTVG 273
Query: 354 FISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN 413
F+S LP LV++F +TLEEV EA LL++V+D + + + V++++ V +
Sbjct: 274 FVSKLPHDLVESFKSTLEEVEEASLLLYVVDISREDYKHQLKVTRNVVEELNVKDTPF-- 331
Query: 414 MIEVWNKID 422
+ V+NKID
Sbjct: 332 -LVVYNKID 339
>gi|134295837|ref|YP_001119572.1| small GTP-binding protein [Burkholderia vietnamiensis G4]
gi|134138994|gb|ABO54737.1| GTP-binding protein HflX [Burkholderia vietnamiensis G4]
Length = 396
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 179/333 (53%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 52 AKMFIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L ++++ +RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKARLDRLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLHEIGADTVR---QVLVFNKIDA 320
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|62184900|ref|YP_219685.1| GTP-binding protein [Chlamydophila abortus S26/3]
gi|424824953|ref|ZP_18249940.1| putative GTP-binding protein [Chlamydophila abortus LLG]
gi|62147967|emb|CAH63715.1| putative GTP-binding protein [Chlamydophila abortus S26/3]
gi|333410052|gb|EGK69039.1| putative GTP-binding protein [Chlamydophila abortus LLG]
Length = 462
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 161/273 (58%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ A+ ++ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGALIIDEEITASQQRNLEKRLGVVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R QR A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKEQRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLPSG +VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T ++L+++GV K +I V NKID
Sbjct: 321 AFEHIETTQEILKELGVDHPK---IITVLNKID 350
>gi|383120048|ref|ZP_09940782.1| GTP-binding protein HflX [Bacteroides sp. 1_1_6]
gi|251838308|gb|EES66395.1| GTP-binding protein HflX [Bacteroides sp. 1_1_6]
Length = 419
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 191/352 (54%), Gaps = 24/352 (6%)
Query: 78 QAKLNEALC--LANSLEEQR--DGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPG 133
+AK+ A+ L ++++R + Y D F E VV+ + K A + T+ G G
Sbjct: 8 EAKVETAVLVGLITQMQDERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKG 67
Query: 134 TVETIKCHI-NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAH 192
+E I+ +I E + E+ + + LS Q RN+E +LDR LI++IF A
Sbjct: 68 KLEEIRQYIRTEEEEEREVGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQ 127
Query: 193 TKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGET 252
T AK Q ELA Y RL R+ + S G G GG + G GET
Sbjct: 128 TANAKTQVELAQYKYMLPRLQRL--------WTHLERQGGGSGSGSGKGGSVGLRGPGET 179
Query: 253 ELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKST 312
+L++ RR IL R S L ++ E+ + +A QR R R + VA+VGYTN GKST
Sbjct: 180 QLEMDRRIILNRMSLLKERLAEIDKQKATQRKNRGR--------MIRVALVGYTNVGKST 231
Query: 313 LVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEE 372
+++ LS S++F++ +LFATLD ++ V++ + LLSDTVGFI LP LVD+F +TL+E
Sbjct: 232 IMNLLSKSEVFAENKLFATLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDE 291
Query: 373 VVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
V EADLLVHV+D + P EE V + L +G K MI ++NKID +
Sbjct: 292 VREADLLVHVVDISHPGFEEQIEVVNKTLADIGGGG---KPMILIFNKIDAY 340
>gi|345882652|ref|ZP_08834110.1| GTP-binding protein HflX [Prevotella sp. C561]
gi|345044536|gb|EGW48573.1| GTP-binding protein HflX [Prevotella sp. C561]
Length = 416
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 171/299 (57%), Gaps = 22/299 (7%)
Query: 128 TFFGPGTVETIKCHINGAESKGE-LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
T+ G G +E I+ +I + + E + + + LS Q RN+E+ G +LDR LI++I
Sbjct: 62 TYVGKGKLEEIRDYIKLKDEEEEPIGMVIFDDELSAKQIRNIEKELGVKILDRTSLILDI 121
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A T AK Q ELA Y RL R+ E + + G G +
Sbjct: 122 FAMRAQTANAKTQVELAQYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGL 172
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+L++ RR IL+R + L ++ E+ + + QR R R + VA+VGYT
Sbjct: 173 RGPGETQLEMDRRIILQRMTLLKQRLAEIDKQKVTQRKNRGR--------MIRVALVGYT 224
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAF 366
N GKST ++ L+ S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP LVD+F
Sbjct: 225 NVGKSTTMNLLAKSEVFAENKLFATLDTTVRKVVVDNLPFLLADTVGFIRKLPTDLVDSF 284
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
+TL+EV EADLL+HV+D + P+ EE V Q L ++G ++ K + ++NKID YH
Sbjct: 285 KSTLDEVGEADLLLHVVDISHPDFEEQIQVVNQTLSELGCAD---KPSMLIFNKIDNYH 340
>gi|312796099|ref|YP_004029021.1| GTP-binding protein hflX [Burkholderia rhizoxinica HKI 454]
gi|312167874|emb|CBW74877.1| GTP-binding protein hflX [Burkholderia rhizoxinica HKI 454]
Length = 415
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/332 (38%), Positives = 182/332 (54%), Gaps = 32/332 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G VE ++ GA++ ++D + N LS QQRNLE + V+DR LI++
Sbjct: 47 AAHFIGSGKVEELRL---GAQAN-DVDIVIFNHALSPAQQRNLEHELERRVVDRTSLILD 102
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RLVR T E R GG G
Sbjct: 103 IFAQRARSHEGKLQVELAQLQYLSTRLVRA------WTHLE-----------RQKGGIG- 144
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L ++ +++R QR R R+ R L +V++VGY
Sbjct: 145 LRGPGETQLETDRRLIGERIKMLRGKLRKLQRQHGTQRRQRERN-----RTL-SVSLVGY 198
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL+ + ++ +LFATLD + V L +G V++SDTVGFI DLP QLV
Sbjct: 199 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGEAGNVVVSDTVGFIRDLPHQLVA 258
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATLEE V ADLL+H++D + + V VL+++G + I V+NKID
Sbjct: 259 AFRATLEETVHADLLLHIVDAASAVRADQIEQVNDVLREIGAASIP---QILVFNKIDQV 315
Query: 425 DEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ ++ N +R T + +D
Sbjct: 316 PELASRADRVERNEYGNITRVFLSARTGQGLD 347
>gi|424741887|ref|ZP_18170223.1| GTP-binding protein HflX [Acinetobacter baumannii WC-141]
gi|422944484|gb|EKU39479.1| GTP-binding protein HflX [Acinetobacter baumannii WC-141]
Length = 447
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 183/318 (57%), Gaps = 36/318 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ ++ K F G G VE I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHIKVQRNKPNPKFFIGSGKVEEI------AEQVQELEASLVIFDHALSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G + +
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GWSADF 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GET+L+ RR I R + L ++E+V +TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGETQLETDRRLIRVRIAQLKDKLEKVHQTRIQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLS 349
+ TV++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ + G V+L+
Sbjct: 197 ----AAIPTVSLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLEWDGIGTVVLA 252
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGF+ +L LV++F ATLEE +EA LL+HV+D + ++ + V VL+++G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSNSHDMLDQIEAVEGVLKEIGADAP 312
Query: 410 KLKNMIEVWNKIDYHDEE 427
L+ V+NKID EE
Sbjct: 313 VLR----VYNKIDLSGEE 326
>gi|386817130|ref|ZP_10104348.1| GTP-binding proten HflX [Thiothrix nivea DSM 5205]
gi|386421706|gb|EIJ35541.1| GTP-binding proten HflX [Thiothrix nivea DSM 5205]
Length = 426
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 173/295 (58%), Gaps = 32/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I+ +N ++ AIF ++ LS Q+RNLE+ VLDR GLI++IF
Sbjct: 59 FIGEGKAEEIRLLLNAKDAN---LAIFDHS-LSPAQERNLEKRLQCRVLDRTGLILDIFA 114
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 115 QRARSHEGKLQVELAQLKHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 156
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I ER + ++E+V+ R R AR++ + TV++VGYTNA
Sbjct: 157 PGETQLETDRRLIGERIKQINKRLEKVQNQREQGRQARKKAE------IPTVSLVGYTNA 210
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL +AL+++++++ +LFATLDP L+ V LP+ + +L+DTVGFI LP LV AF
Sbjct: 211 GKSTLFNALTEAEVYAADQLFATLDPTLRKVQLPNQQETILADTVGFIRHLPHDLVAAFR 270
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+E ++ADLL+HV+D LE +R V +V+ ++G IEV NKID
Sbjct: 271 STLQETIDADLLLHVIDSHDEQLELYREQVNKVIAEIGAENVP---QIEVMNKID 322
>gi|294139257|ref|YP_003555235.1| GTP-binding protein HflX [Shewanella violacea DSS12]
gi|293325726|dbj|BAJ00457.1| GTP-binding protein HflX [Shewanella violacea DSS12]
Length = 432
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 169/305 (55%), Gaps = 35/305 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G + + + E+ + + N LS Q+RNLE VLDR LI++IF
Sbjct: 57 FLGSGKADELAALVAATEA----NVVIFNHALSPAQERNLEMVCQCRVLDRTALILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 113 QRARTYEGKLQVELAQLRHMSTRLIR----------GWTHLE-------RQKGGIG-MRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R + ++ +V + R R AR R TV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRGRMGTINKRLAKVDKQREQSRRARSRSEQP------TVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHA 368
GKSTL ++L+ SD+++ +LFATLDP L+ + LP G ++L+DTVGFI LP LV AF +
Sbjct: 209 GKSTLFNSLTVSDVYAADQLFATLDPTLRKLDLPDGAIILADTVGFIRHLPHDLVAAFKS 268
Query: 369 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-------EKLKNMIEVWNKI 421
TL+E EADLL+H++DC N+E++ V VL+++G E K+ + +V +I
Sbjct: 269 TLQETREADLLLHIVDCHDDNMEDNFEQVQLVLKEIGADEIPQLVVCNKIDLLEDVSPRI 328
Query: 422 DYHDE 426
DY+DE
Sbjct: 329 DYNDE 333
>gi|410920954|ref|XP_003973948.1| PREDICTED: putative GTP-binding protein 6-like [Takifugu rubripes]
Length = 514
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 206/399 (51%), Gaps = 46/399 (11%)
Query: 63 RLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSG 122
RLF+V P +K + Q L LA ++ G +T L VV + L +
Sbjct: 93 RLFIVHPDVKWGSRKQHLTTAELMLAEAV-----GLVNT------LDNWTVVDSIILSTK 141
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERAWGKPVLDRVG 181
FG G +++ I ++ G + A+FVN LS + + L+ AWG V DR
Sbjct: 142 TPEKKRIFGKGNFQSLTEKIR--QTAG-ITAVFVNVERLSPLSVKELKEAWGVNVFDRYS 198
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
+++ IF +A TKEAKLQ LA + +SRL +V + +G G
Sbjct: 199 VVLHIFRCNAQTKEAKLQISLAEIPLLRSRL----------------RNDVANLDQQG-G 241
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
+I G+GET L++Q+R + ER + S +E++RR R + R+ R+ + V+
Sbjct: 242 RSKYIGGSGETLLEVQQRLLRERELKIRSALEKLRRKRHLLRSQRKH------KEFPVVS 295
Query: 302 VVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLP 359
V+GYTN GK+TL+ +L+ DS L +LFATLD + + LP+ VL DT+GF+S LP
Sbjct: 296 VLGYTNCGKTTLIKSLTGDSGLQPKNQLFATLDVTVHAGQLPNHMTVLYVDTIGFLSQLP 355
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
QL+D+F ATLE++ +DLLVHV D + P + VL VL+ + + E L +MIEV N
Sbjct: 356 HQLIDSFSATLEDIKHSDLLVHVRDISHPETVNQKVNVLNVLKNLQIPERLLGSMIEVHN 415
Query: 420 KID------YHDEEMGDVEYIDGDDISNFSRAEDKDTTS 452
KID + D + + +DG + A + + +
Sbjct: 416 KIDLIDNYQFMDPHVLPISALDGRGLDELKMAVEAEIIA 454
>gi|346224481|ref|ZP_08845623.1| GTP-binding protein HflX [Anaerophaga thermohalophila DSM 12881]
Length = 404
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 170/294 (57%), Gaps = 32/294 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E I ++ E ++ AI + L+ Q +NLE A+ + +LDR LI++IF
Sbjct: 63 YVGSGKLEEIIAYVKVHE---DVSAIIFDDELTPSQLKNLEAAFQRRILDRTNLILDIFA 119
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T AK Q ELA Y RL R+ + R GG G + G
Sbjct: 120 KRARTAHAKTQVELAQYQYLLPRLTRMW-----------------THLERQRGGIG-MRG 161
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE E++ RR I ++ + L ++++++ R +A QR R + L VA+VGYTN
Sbjct: 162 PGEKEIETDRRIIRDKIARLKTELQKIDRQKATQRKNRGK--------LVRVALVGYTNV 213
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHA 368
GKSTL++AL+ SD+F++ +LFATLD ++ VV+ + LL+DTVGFI LP LV++F +
Sbjct: 214 GKSTLMNALAKSDVFAENKLFATLDTTVRKVVVGNLPFLLADTVGFIRKLPHHLVESFKS 273
Query: 369 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
TL+EV EAD+L+HV+D + P E+ V Q L ++ +E+ K MI V+NK+D
Sbjct: 274 TLDEVREADILLHVVDISHPGFEQQIEVVNQTLHEI---DEREKPMIMVFNKVD 324
>gi|71728048|gb|EAO30257.1| Small GTP-binding protein domain [Xylella fastidiosa Ann-1]
Length = 450
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 168/295 (56%), Gaps = 30/295 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G ++ IK A++ G D I +N LS +Q+RNLE++ + V+DR GLI++IF
Sbjct: 56 TLLSSGKLKEIK---ETADATGA-DLILINHSLSPVQERNLEKSLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G RG
Sbjct: 112 AQRACSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRGGAIGLRG--- 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR + +R L ++ +V R R AR R + +A+VGYTN
Sbjct: 156 -PGETQLETDRRLLQKRVEQLQKRLSKVEVQRTQMRRARVRSE------VPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
+GKSTL +AL+ + ++ +LFATLDP+++ +VLP +L+DTVGF+ LP +LV AF
Sbjct: 209 SGKSTLFNALTGASAYTADQLFATLDPKVRRIVLPGSSAMLADTVGFVRHLPHELVAAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL E EADLL+HV+D P EE V +VLQ +G E L ++ V+NKID
Sbjct: 269 STLSEAREADLLLHVIDAADPLREERIDQVDEVLQAIGAGE--LPQLL-VFNKID 320
>gi|380696927|ref|ZP_09861786.1| GTP-binding protein HflX [Bacteroides faecis MAJ27]
Length = 419
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 181/334 (54%), Gaps = 20/334 (5%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E I+ +I E + E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIRQYIRTEEEEERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ + S G G GG + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL--------WTHLERQGGGSGSGSGKGGSVGLRGPGETQLEMDRRIILNRMSLLKE 197
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R + VA+VGYTN GKST+++ LS S++F++ +LFA
Sbjct: 198 RLAEIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTIMNLLSKSEVFAENKLFA 249
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 250 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPGF 309
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G K MI ++NKID +
Sbjct: 310 EEQIEVVNRTLADIGGGG---KPMILIFNKIDAY 340
>gi|71275937|ref|ZP_00652220.1| Small GTP-binding protein domain [Xylella fastidiosa Dixon]
gi|71163314|gb|EAO13033.1| Small GTP-binding protein domain [Xylella fastidiosa Dixon]
gi|71730233|gb|EAO32319.1| Small GTP-binding protein domain [Xylella fastidiosa subsp. sandyi
Ann-1]
Length = 450
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 168/295 (56%), Gaps = 30/295 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G ++ IK A++ G D I +N LS +Q+RNLE++ + V+DR GLI++IF
Sbjct: 56 TLISSGKLKEIK---ETADATGA-DLILINHSLSPVQERNLEKSLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G RG
Sbjct: 112 AQRACSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRGGAIGLRG--- 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR + +R L ++ +V R R AR R + +A+VGYTN
Sbjct: 156 -PGETQLETDRRLLQKRVEQLQKRLSKVEVQRTQMRRARVRSK------VPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
+GKSTL +AL+ + ++ +LFATLDP+++ +VLP +L+DTVGF+ LP +LV AF
Sbjct: 209 SGKSTLFNALTGASAYTADQLFATLDPKVRRIVLPGSSAMLADTVGFVRHLPHELVAAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL E EADLL+HV+D P EE V +VLQ +G E L ++ V+NKID
Sbjct: 269 STLSEAREADLLLHVIDAADPLREERIDQVDEVLQAIGAGE--LPQLL-VFNKID 320
>gi|189499925|ref|YP_001959395.1| GTP-binding proten HflX [Chlorobium phaeobacteroides BS1]
gi|189495366|gb|ACE03914.1| GTP-binding proten HflX [Chlorobium phaeobacteroides BS1]
Length = 433
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 171/296 (57%), Gaps = 35/296 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE I+ + G G +D + + LS +Q RNLERA+ V+DR LI++IF
Sbjct: 64 FLGKGKVEEIEHIVKG----GLIDVVIFDEELSPVQTRNLERAFDCKVVDRTELILQIFA 119
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + +AK+Q ELA L Y RL R+ + + GG G G
Sbjct: 120 IRAQSSQAKMQVELAQLEYLLPRLTRLW-----------------THLSKQKGGIG-TKG 161
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+++ RR + R S L ++++V A+Q A + + G R VA+VGYTNA
Sbjct: 162 PGETQIETDRRLVRRRISFLKGKLKDV----ALQHATQTKDRGRITR----VALVGYTNA 213
Query: 309 GKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGKV-LLSDTVGFISDLPLQLVDAF 366
GKSTL++ L +++ + + RLFATLD + + + L KV LLSDTVGFI LP +LV++F
Sbjct: 214 GKSTLMNRLCPEAEAYVEDRLFATLDTKTRRLELKINKVVLLSDTVGFIRKLPHRLVESF 273
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV++AD L+HV+D + EE VL+ LQ++GV N+I V+NKID
Sbjct: 274 RSTLDEVLQADFLLHVIDTSHEGFEEQMRVVLETLQEIGVQH---GNIINVFNKID 326
>gi|28198002|ref|NP_778316.1| GTP-binding protein [Xylella fastidiosa Temecula1]
gi|182680628|ref|YP_001828788.1| GTP-binding proten HflX [Xylella fastidiosa M23]
gi|386084140|ref|YP_006000422.1| GTP-binding proten HflX [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|417557526|ref|ZP_12208562.1| GTPase [Xylella fastidiosa EB92.1]
gi|28056062|gb|AAO27965.1| GTP-binding protein [Xylella fastidiosa Temecula1]
gi|182630738|gb|ACB91514.1| GTP-binding proten HflX [Xylella fastidiosa M23]
gi|307579087|gb|ADN63056.1| GTP-binding proten HflX [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|338179922|gb|EGO82832.1| GTPase [Xylella fastidiosa EB92.1]
Length = 450
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 168/295 (56%), Gaps = 30/295 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G ++ IK A++ G D I +N LS +Q+RNLE++ + V+DR GLI++IF
Sbjct: 56 TLLSSGKLKEIK---ETADATGA-DLILINHSLSPVQERNLEKSLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G RG
Sbjct: 112 AQRACSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRGGAIGLRG--- 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR + +R L ++ +V R R AR R + +A+VGYTN
Sbjct: 156 -PGETQLETDRRLLQKRVEQLQKRLSKVEVQRTQMRRARVRSE------VPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
+GKSTL +AL+ + ++ +LFATLDP+++ +VLP +L+DTVGF+ LP +LV AF
Sbjct: 209 SGKSTLFNALTGASAYTANQLFATLDPKVRRIVLPGSSAMLADTVGFVRHLPHELVAAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL E EADLL+HV+D P EE V +VLQ +G E L ++ V+NKID
Sbjct: 269 STLSEAREADLLLHVIDAADPLREERIDQVDEVLQAIGAGE--LPQLL-VFNKID 320
>gi|386315096|ref|YP_006011261.1| GTP-binding proten HflX [Shewanella putrefaciens 200]
gi|319427721|gb|ADV55795.1| GTP-binding proten HflX [Shewanella putrefaciens 200]
Length = 435
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 165/286 (57%), Gaps = 27/286 (9%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
E + + N LS Q+RNLE+ VLDR LI++IF A T E KLQ ELA L +
Sbjct: 74 EANVVIFNHALSPAQERNLEQVCQCRVLDRTTLILDIFAQRARTHEGKLQVELAQLRHMS 133
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
+RLVR G T R GG G + G GET+L+ RR + R ++
Sbjct: 134 TRLVR----------GWTHLE-------RQKGGIG-LRGPGETQLETDRRLLRGRIKNIN 175
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
++E V + R R AR+R + TV++VGYTNAGKSTL +AL+ SD+++ +LF
Sbjct: 176 KRLERVDKQREQSRRARKRSE------MPTVSLVGYTNAGKSTLFNALTSSDVYAADQLF 229
Query: 330 ATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
ATLDP L+ + LP G V+L+DTVGFI LP LV AF ATL+E +A+LL+H++DC N
Sbjct: 230 ATLDPTLRKLDLPDGAVILADTVGFIRHLPHDLVAAFKATLQETRQAELLLHIVDCADEN 289
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 435
+ ++ V VL+ + E + +I V NKID ++ +EY D
Sbjct: 290 MADNFEQVQSVLKDIDADE--VMQLI-VCNKIDLLEDVTPRIEYDD 332
>gi|339489619|ref|YP_004704147.1| GTP-binding proten HflX [Pseudomonas putida S16]
gi|338840462|gb|AEJ15267.1| GTP-binding proten HflX [Pseudomonas putida S16]
Length = 417
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 174/298 (58%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE + ++ + +D + N L+ Q+RNLER + VLDR GLI++
Sbjct: 39 AKYLIGSGKVEELHDLVHAEQ----VDLVIFNHTLTPSQERNLERVFECRVLDRTGLILD 94
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 95 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 136
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + S++E+VR R R R+R +D + +V++VGY
Sbjct: 137 LRGPGETQLETDRRLLRVRIRQIKSRLEKVRSQREQARRGRKR---AD---IPSVSLVGY 190
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL++S++++ +LFATLDP L+ + L G ++L+DTVGFI LP +LV+
Sbjct: 191 TNAGKSTLFNALTESEVYAADQLFATLDPTLRRLELTDLGPIVLADTVGFIRHLPHKLVE 250
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATLEE +DLL+HV+D P E VL VL ++G E L ++EV+NK+D
Sbjct: 251 AFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGA--EGLP-ILEVYNKLD 305
>gi|172060766|ref|YP_001808418.1| GTP-binding proten HflX [Burkholderia ambifaria MC40-6]
gi|171993283|gb|ACB64202.1| GTP-binding proten HflX [Burkholderia ambifaria MC40-6]
Length = 396
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 179/333 (53%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 52 AKMFIGSGKADELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS--GKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGADTIR---QVLVFNKIDA 320
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|399024679|ref|ZP_10726710.1| GTP-binding protein HflX [Chryseobacterium sp. CF314]
gi|398079976|gb|EJL70809.1| GTP-binding protein HflX [Chryseobacterium sp. CF314]
Length = 407
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 166/297 (55%), Gaps = 33/297 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
+ TF G G + IK ++ + E+ + + LS Q +NLER +LDR LI++
Sbjct: 58 SKTFIGSGKAQEIKEYV----KEHEIGTVIFDDELSPSQLKNLEREIEIKILDRTNLILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T A+ Q ELA Y RL R+ + R GG G
Sbjct: 114 IFAQRAQTSYARTQVELAQYQYLLPRLTRMW-----------------THLERQKGGIG- 155
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GETE++ RR I +R S L +++ + + A QR R + + A+VGY
Sbjct: 156 MRGPGETEIETDRRIIRDRISLLKDKLKTIDKQMATQRNNRGK--------VVRAALVGY 207
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDA 365
TN GKSTL++ALS S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP QLV++
Sbjct: 208 TNVGKSTLMNALSKSEVFAENKLFATLDTTVRKVVIGNLPFLLTDTVGFIRKLPTQLVES 267
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
F +TL+EV EADLL+HV+D + + E+H +V L ++ + K MI V+NKID
Sbjct: 268 FKSTLDEVREADLLIHVVDISHESFEDHIESVNHTLMEINAHQ---KPMIMVFNKID 321
>gi|114330965|ref|YP_747187.1| small GTP-binding protein [Nitrosomonas eutropha C91]
gi|114307979|gb|ABI59222.1| GTP-binding protein HflX [Nitrosomonas eutropha C91]
Length = 377
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 167/296 (56%), Gaps = 32/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G VE I + ++ + N LS IQQRNL A ++DR LI++IF
Sbjct: 57 TFIGKGKVEEISQIVVQTQAA----MVIFNHELSPIQQRNLSTALACRIIDRTSLILDIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L Y +RLVR G T R GG G +
Sbjct: 113 AQRAKSHEGKLQVELAQLEYLSTRLVR----------GWTHLE-------RQKGGIG-LR 154
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R L ++ ++++ R VQR AR+R + +V++VGYTN
Sbjct: 155 GPGETQLETDRRLLAKRVKFLKEKLAKLKQQRDVQRRARKRSE------IMSVSIVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAF 366
AGKSTL + L SD ++ +LFATLD + + LP G +++SDTVGFI DLP LV AF
Sbjct: 209 AGKSTLFNRLVRSDAYAADKLFATLDTTTRRLFLPERGLIVISDTVGFIRDLPHTLVAAF 268
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEE ++ADLL+HV+D ++ N + + V ++LQ++G I + NKID
Sbjct: 269 RATLEETIQADLLLHVVDVSSSNRDVQISEVNKLLQEIGADTIP---QILILNKID 321
>gi|160878692|ref|YP_001557660.1| GTP-binding protein HflX [Clostridium phytofermentans ISDg]
gi|160427358|gb|ABX40921.1| GTP-binding proten HflX [Clostridium phytofermentans ISDg]
Length = 420
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 173/306 (56%), Gaps = 32/306 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K T+ G G +E I+ I + G I + LS Q RNLE A V+DR +
Sbjct: 55 KIHPGTYVGKGKIEEIRLLIEQLGATG----IICDDELSPAQLRNLEDALQAKVMDRTMI 110
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF HA T+E K+Q ELA L Y+ +RL+ +R RL G
Sbjct: 111 ILDIFAQHASTREGKIQVELAQLKYRATRLIGMRNSLSRLGGGIGT-------------- 156
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G GE +L++ RR I +R + L ++++++R R V R+ R ++ + VA+
Sbjct: 157 ----RGPGEKKLEIDRRLIKDRIAQLNRELDDIKRNREVARSLRMKNP------IPVVAI 206
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQ 361
VGYTNAGKSTL++ L+++D+ LFATLDP +++ L SG+ VLL+DTVGFI LP
Sbjct: 207 VGYTNAGKSTLLNRLTEADVLEANMLFATLDPTTRNLSLESGQQVLLTDTVGFIRKLPHH 266
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
L+DAF +TLEE AD+++HV+D + P + V + L+++ V++ K +I V+NK
Sbjct: 267 LIDAFRSTLEEAKYADIIIHVVDASNPQAYKQMHIVYETLKKLQVTD---KTVITVFNKQ 323
Query: 422 DYHDEE 427
D EE
Sbjct: 324 DLVQEE 329
>gi|389707865|ref|ZP_10186505.1| GTP-binding protein [Acinetobacter sp. HA]
gi|388610484|gb|EIM39604.1| GTP-binding protein [Acinetobacter sp. HA]
Length = 446
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 172/300 (57%), Gaps = 33/300 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I + E+ D + + L+ Q RNLER V+DR LI++IF
Sbjct: 58 FIGSGKAEEIAEKVEALEA----DLVIFDHTLTPAQARNLERVVKCRVVDRTELILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + SRL+R RG + S +G G G RG
Sbjct: 114 LRARTYEGKLQVELAQLQHLSSRLIRSRG-------------NLDSQKG-GIGLRG---- 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET L+ RR + R L +++++VR+TR R AR++ + T+++VGYTNA
Sbjct: 156 PGETLLETDRRLLRVRMGQLKARLDKVRQTRMQGRVARQK------AAVPTISLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+DSD+++ +LFATLDP L+ + G V+L+DTVGF+ +L LV++F
Sbjct: 210 GKSTLFNILADSDVYAADQLFATLDPTLRRLDWEGIGTVVLADTVGFVRNLSHSLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
ATLEE +EA LL+HV+D ++P + E V VL+++G + L+ V+NKID EE
Sbjct: 270 ATLEETLEATLLLHVIDSSSPEILEQIDAVESVLKEIGANVPVLR----VYNKIDQSGEE 325
>gi|262377478|ref|ZP_06070700.1| GTP-binding protein HflX [Acinetobacter lwoffii SH145]
gi|262307534|gb|EEY88675.1| GTP-binding protein HflX [Acinetobacter lwoffii SH145]
Length = 446
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 183/326 (56%), Gaps = 42/326 (12%)
Query: 105 DKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSG 162
D E+ H+ Q K A F G G E I AE EL+A + + L+
Sbjct: 39 DTEILEHIYAQRV-----KPDAKFFIGSGKAEEI------AERVEELEANLVIFDHALTP 87
Query: 163 IQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRL 222
Q RNLE+ V+DR LI++IF A T E KLQ ELA L + SRL+R RG
Sbjct: 88 AQARNLEQVIKCRVVDRTELILDIFAQRARTYEGKLQVELAQLQHLSSRLIRSRG----- 142
Query: 223 TFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQ 282
+ S +G G G RG GET L+ RR + R L ++I++VR+TR
Sbjct: 143 --------NLDSQKG-GIGLRG----PGETLLETDRRLLRIRMGQLKARIDKVRQTRMQG 189
Query: 283 RAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP 342
R AR++ + TV++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ +
Sbjct: 190 RVARQKAA------VPTVSLVGYTNAGKSTLFNLLANSDVYAADQLFATLDPTLRRLEWD 243
Query: 343 S-GKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVL 401
G ++L+DTVGF+ +L LV++F ATLEE VEA LL+HV+D ++P + E V +VL
Sbjct: 244 GIGNLVLADTVGFVRNLSHSLVESFKATLEETVEATLLLHVIDSSSPEMLEQIEAVEKVL 303
Query: 402 QQVGVSEEKLKNMIEVWNKIDYHDEE 427
+++G +++V+NKID EE
Sbjct: 304 KEIGAD----VPILQVYNKIDCSGEE 325
>gi|357061272|ref|ZP_09122031.1| GTP-binding protein HflX [Alloprevotella rava F0323]
gi|355374781|gb|EHG22073.1| GTP-binding protein HflX [Alloprevotella rava F0323]
Length = 421
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 188/342 (54%), Gaps = 21/342 (6%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
AL E Q + Y D F E V+ + K + T+ G G +E ++ I
Sbjct: 18 ALITKTQDERQANEYLDELAFLAETAGAECVKRFTQKLDGPHSVTYVGKGKLEEMRRWIE 77
Query: 144 G-AESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAEL 202
E++ ++D + + LS Q RN+E V+DR LI++IF A T AK Q EL
Sbjct: 78 SELEAERDVDMVVFDDELSAKQIRNIENELKVRVIDRTQLILDIFAMRAQTANAKTQVEL 137
Query: 203 AALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRIL 262
A Y RL R+ T E S G+G+ G + G GET+L++ RR IL
Sbjct: 138 AQYKYMLPRLQRM------WTHLERQGGGSGSGGGKGAVG---LRGPGETQLEMDRRIIL 188
Query: 263 ERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDL 322
R + L S++ E+ + + QR+ R R + VA+VGYTN GKSTL++ ++ +++
Sbjct: 189 NRMALLKSRLSEIDKQKRTQRSNRGR--------MIRVALVGYTNVGKSTLLNLMAKTEV 240
Query: 323 FSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 382
F++ +LFATLD ++ VV+ + LLSDTVGFI +P LVD+F +TL+EV EADLL+HV
Sbjct: 241 FAENKLFATLDTTVRKVVIDNLPFLLSDTVGFIRKIPTDLVDSFKSTLDEVREADLLLHV 300
Query: 383 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+D + P+ EE V + L +G +E K +I V+NK+D +
Sbjct: 301 VDISHPDFEEQIDVVNRTLADLGCAE---KPVIIVFNKVDAY 339
>gi|427424533|ref|ZP_18914655.1| GTP-binding protein HflX [Acinetobacter baumannii WC-136]
gi|425698640|gb|EKU68274.1| GTP-binding protein HflX [Acinetobacter baumannii WC-136]
Length = 447
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 184/318 (57%), Gaps = 36/318 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ ++ K F G G VE I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHIKVQRNKPNPKFFIGSGKVEEI------AEQVQELEASLVIFDHALSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G + +
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GWSADF 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GET+L+ RR I R + L ++++V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGETQLETDRRLIRVRITQLKDKLDKVQQTRMQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLS 349
+ TV++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ + G V+L+
Sbjct: 197 ----AAIPTVSLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTVVLA 252
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++ ++ + V VL+ +G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSHDMLDQIEAVEGVLKDIGADAP 312
Query: 410 KLKNMIEVWNKIDYHDEE 427
L+ V+NKID EE
Sbjct: 313 VLR----VYNKIDLSGEE 326
>gi|121599988|ref|YP_993147.1| GTP-binding protein HflX [Burkholderia mallei SAVP1]
gi|124386447|ref|YP_001026077.1| GTP-binding protein HflX [Burkholderia mallei NCTC 10229]
gi|126448989|ref|YP_001080654.1| GTP-binding protein HflX [Burkholderia mallei NCTC 10247]
gi|167002236|ref|ZP_02268026.1| GTP-binding protein HflX [Burkholderia mallei PRL-20]
gi|167719275|ref|ZP_02402511.1| GTP-binding protein HflX [Burkholderia pseudomallei DM98]
gi|167815461|ref|ZP_02447141.1| GTP-binding protein HflX [Burkholderia pseudomallei 91]
gi|167845412|ref|ZP_02470920.1| GTP-binding protein HflX [Burkholderia pseudomallei B7210]
gi|167902404|ref|ZP_02489609.1| GTP-binding protein HflX [Burkholderia pseudomallei NCTC 13177]
gi|167910646|ref|ZP_02497737.1| GTP-binding protein HflX [Burkholderia pseudomallei 112]
gi|254177706|ref|ZP_04884361.1| GTP-binding protein HflX [Burkholderia mallei ATCC 10399]
gi|254189052|ref|ZP_04895563.1| GTP-binding proten HflX [Burkholderia pseudomallei Pasteur 52237]
gi|254197755|ref|ZP_04904177.1| GTP-binding protein HflX [Burkholderia pseudomallei S13]
gi|254259963|ref|ZP_04951017.1| GTP-binding protein HflX [Burkholderia pseudomallei 1710a]
gi|254297434|ref|ZP_04964887.1| GTP-binding protein HflX [Burkholderia pseudomallei 406e]
gi|254358308|ref|ZP_04974581.1| GTP-binding protein HflX [Burkholderia mallei 2002721280]
gi|418383005|ref|ZP_12966923.1| GTP-binding protein HflX [Burkholderia pseudomallei 354a]
gi|418553148|ref|ZP_13117986.1| GTP-binding protein HflX [Burkholderia pseudomallei 354e]
gi|121228798|gb|ABM51316.1| GTP-binding protein HflX [Burkholderia mallei SAVP1]
gi|124294467|gb|ABN03736.1| GTP-binding protein HflX [Burkholderia mallei NCTC 10229]
gi|126241859|gb|ABO04952.1| GTP-binding protein HflX [Burkholderia mallei NCTC 10247]
gi|148027435|gb|EDK85456.1| GTP-binding protein HflX [Burkholderia mallei 2002721280]
gi|157806974|gb|EDO84144.1| GTP-binding protein HflX [Burkholderia pseudomallei 406e]
gi|157936731|gb|EDO92401.1| GTP-binding proten HflX [Burkholderia pseudomallei Pasteur 52237]
gi|160698745|gb|EDP88715.1| GTP-binding protein HflX [Burkholderia mallei ATCC 10399]
gi|169654496|gb|EDS87189.1| GTP-binding protein HflX [Burkholderia pseudomallei S13]
gi|243062053|gb|EES44239.1| GTP-binding protein HflX [Burkholderia mallei PRL-20]
gi|254218652|gb|EET08036.1| GTP-binding protein HflX [Burkholderia pseudomallei 1710a]
gi|385372082|gb|EIF77214.1| GTP-binding protein HflX [Burkholderia pseudomallei 354e]
gi|385376776|gb|EIF81412.1| GTP-binding protein HflX [Burkholderia pseudomallei 354a]
Length = 387
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 180/335 (53%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G + ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 47 AALFVGSGKADELRLACEAN------DVEIVIFNHALAPAQQRNLERVLNRRVIDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R G +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHHTQRRQRARSG------TLSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 256
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V VL+++G + I V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIR---QILVFNKI 313
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGGAVERDEYGNISRVFLSARTGQGLD 348
>gi|126439543|ref|YP_001059218.1| GTP-binding protein HflX [Burkholderia pseudomallei 668]
gi|126219036|gb|ABN82542.1| GTP-binding protein HflX [Burkholderia pseudomallei 668]
Length = 387
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 180/335 (53%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G + ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 47 AALFVGSGKADELRLACEAN------DVEIVIFNHALAPAQQRNLERVLNRRVIDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R G +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHHTQRRQRARSG------TLSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 256
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V VL+++G + I V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIR---QILVFNKI 313
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGGAVERDEYGNISRVFLSARTGQGLD 348
>gi|53719153|ref|YP_108139.1| GTP-binding protein [Burkholderia pseudomallei K96243]
gi|76812111|ref|YP_333744.1| GTP-binding protein HflX [Burkholderia pseudomallei 1710b]
gi|52209567|emb|CAH35520.1| putative GTP-binding protein [Burkholderia pseudomallei K96243]
gi|76581564|gb|ABA51039.1| GTP-binding protein HflX [Burkholderia pseudomallei 1710b]
Length = 392
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 180/335 (53%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G + ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 52 AALFVGSGKADELRLACEAN------DVEIVIFNHALAPAQQRNLERVLNRRVIDRTSLI 105
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 106 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 148
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R G +V++V
Sbjct: 149 G-LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHHTQRRQRARSG------TLSVSLV 201
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 202 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 261
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V VL+++G + I V+NKI
Sbjct: 262 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIR---QILVFNKI 318
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E ++ D+ N SR T + +D
Sbjct: 319 DAVPELAARGGAVERDEYGNISRVFLSARTGQGLD 353
>gi|167738272|ref|ZP_02411046.1| GTP-binding protein HflX [Burkholderia pseudomallei 14]
Length = 387
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 180/335 (53%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G + ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 47 AALFVGSGKADELRLACEAN------DVEIVIFNHALAPAQQRNLERVLNRRVIDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R G +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHHTQRRQRARSG------TLSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 256
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V VL+++G + I V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIR---QILVFNKI 313
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGGAVERDEYGNISRVFLSARTGQGLD 348
>gi|323486669|ref|ZP_08091990.1| hypothetical protein HMPREF9474_03741 [Clostridium symbiosum
WAL-14163]
gi|323400050|gb|EGA92427.1| hypothetical protein HMPREF9474_03741 [Clostridium symbiosum
WAL-14163]
Length = 418
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 173/302 (57%), Gaps = 32/302 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E ++ + + G + + LS Q RNLE A V+DR +I++IF
Sbjct: 60 TYLGKGKIEEVRERVFELGATG----VICDDELSPAQLRNLENALDTKVMDRTMVILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+HA T E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 116 ASHAVTSEGKIQVELAQLKYRAARLVGLRNSLSRLGGGIGTRG----------------- 158
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GE +L++ RR I +R L +++ EV+R R V R R R+ + A+VGYTN
Sbjct: 159 -PGEKKLEVDRRLIHDRIGQLKAELLEVKRHREVARKQRDRNYT------LSAAIVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAF 366
AGKSTL++ L+ + + ++ +LFATLDP + + LPSG K+LL+DTVGFI LP L++AF
Sbjct: 212 AGKSTLLNKLTGAGILAEDKLFATLDPTTRGMELPSGQKILLTDTVGFIRKLPHHLIEAF 271
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
+TLEE +D+++HV+DC +P ++ V + L+++ + + K ++ V+NKID ++
Sbjct: 272 RSTLEEARYSDIILHVVDCVSPQMDSQIHIVYETLRKLEIKD---KTIVTVFNKIDCLEQ 328
Query: 427 EM 428
E+
Sbjct: 329 EV 330
>gi|254555913|ref|YP_003062330.1| GTPase [Lactobacillus plantarum JDM1]
gi|254044840|gb|ACT61633.1| GTPase [Lactobacillus plantarum JDM1]
Length = 431
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 168/303 (55%), Gaps = 31/303 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TFFG G V IK + +L + +NA L+ Q RNLE ++DR GLI+EIF
Sbjct: 57 TFFGKGKVVEIK----EVAAANDLHIMVINADLTPSQVRNLEEQTDIQIIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL R + + + +A G G G
Sbjct: 113 GNRARSKEAKLQVKIAQLQYQLPRL--------RTSISNRLDQQAGAAAGGGGGFTN--R 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR I +R SH +++E+ + V+R+ R D GL VA+VGYTN
Sbjct: 163 GAGETQLELNRRTIQDRISHAKHELKELNKDEVVRRSQR------DKAGLPNVALVGYTN 216
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKST ++ L D +F LFATLD ++ + P K +LLSDTVGF+SDLP
Sbjct: 217 AGKSTTMNGLVKLFGKGEDKQVFEKDMLFATLDTSIRQLTFPDNKQLLLSDTVGFVSDLP 276
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
L++AF +TL E ADLL+ V+D P+ +E T + L+++GV + MI +N
Sbjct: 277 HNLINAFRSTLAEAANADLLIQVIDYADPHYKEMMATTEKTLKEIGVHDVP---MIYAFN 333
Query: 420 KID 422
K D
Sbjct: 334 KAD 336
>gi|225388053|ref|ZP_03757777.1| hypothetical protein CLOSTASPAR_01787 [Clostridium asparagiforme
DSM 15981]
gi|225045906|gb|EEG56152.1| hypothetical protein CLOSTASPAR_01787 [Clostridium asparagiforme
DSM 15981]
Length = 427
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 177/313 (56%), Gaps = 40/313 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
V+QN K T+ G G +E +K + ELDA + + LS Q +NLE
Sbjct: 49 VIQNRE----KVHPGTYLGKGKIEEVKDLV------WELDATGVVCDDELSPAQLKNLEA 98
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
A V+DR +I++IF + AHT+E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 99 ALDTKVMDRTMVILDIFASRAHTREGKIQVELAQLKYRAARLVGMRASLSRLGGGIGTRG 158
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
GE +L++ RR I ER L +++E+V+R R V R +R G
Sbjct: 159 ------------------PGEKKLEVDRRLIHERIGQLKAELEDVKRHREVTRQ-QREQG 199
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLS 349
+ + A+VGYTNAGKSTL++ L+D+D+ ++ +LFATLDP +S LP ++LL+
Sbjct: 200 CA-----VSAAIVGYTNAGKSTLLNHLTDADILAEDKLFATLDPTTRSFTLPGDQQILLT 254
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGFI LP L++AF +TLEE +D+++HV+DC+ P ++ V + L+ + + +
Sbjct: 255 DTVGFIRKLPHHLIEAFKSTLEEAKYSDIILHVVDCSNPQMDMQMHVVRETLKDLEIVD- 313
Query: 410 KLKNMIEVWNKID 422
K ++ V+NK D
Sbjct: 314 --KTVVTVFNKTD 324
>gi|323692185|ref|ZP_08106428.1| GTP-binding protein HflX [Clostridium symbiosum WAL-14673]
gi|355623742|ref|ZP_09047342.1| GTP-binding protein HflX [Clostridium sp. 7_3_54FAA]
gi|323503759|gb|EGB19578.1| GTP-binding protein HflX [Clostridium symbiosum WAL-14673]
gi|354822245|gb|EHF06612.1| GTP-binding protein HflX [Clostridium sp. 7_3_54FAA]
Length = 418
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 173/302 (57%), Gaps = 32/302 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E ++ + + G + + LS Q RNLE A V+DR +I++IF
Sbjct: 60 TYLGKGKIEEVRERVFELGATG----VICDDELSPAQLRNLENALDTKVMDRTMVILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+HA T E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 116 ASHAVTSEGKIQVELAQLKYRAARLVGLRNSLSRLGGGIGTRG----------------- 158
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GE +L++ RR I +R L +++ EV+R R V R R R+ + A+VGYTN
Sbjct: 159 -PGEKKLEVDRRLIHDRIGQLKAELLEVKRHREVARKQRDRNYT------LSAAIVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAF 366
AGKSTL++ L+ + + ++ +LFATLDP + + LPSG K+LL+DTVGFI LP L++AF
Sbjct: 212 AGKSTLLNKLTGAGILAEDKLFATLDPTTRGMELPSGQKILLTDTVGFIRKLPHHLIEAF 271
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
+TLEE +D+++HV+DC +P ++ V + L+++ + + K ++ V+NKID ++
Sbjct: 272 RSTLEEARYSDIILHVVDCVSPQMDSQIHIVYETLRKLEIKD---KTIVTVFNKIDCLEQ 328
Query: 427 EM 428
E+
Sbjct: 329 EV 330
>gi|120597493|ref|YP_962067.1| HSR1-like GTP-binding protein [Shewanella sp. W3-18-1]
gi|146294366|ref|YP_001184790.1| HSR1-like GTP-binding protein [Shewanella putrefaciens CN-32]
gi|120557586|gb|ABM23513.1| GTP-binding protein, HSR1-related [Shewanella sp. W3-18-1]
gi|145566056|gb|ABP76991.1| GTP-binding protein, HSR1-related [Shewanella putrefaciens CN-32]
Length = 435
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 165/286 (57%), Gaps = 27/286 (9%)
Query: 150 ELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKK 209
E + + N LS Q+RNLE+ VLDR LI++IF A T E KLQ ELA L +
Sbjct: 74 EANVVIFNHALSPAQERNLEQVCQCRVLDRTTLILDIFAQRARTHEGKLQVELAQLRHMS 133
Query: 210 SRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLL 269
+RLVR G T R GG G + G GET+L+ RR + R ++
Sbjct: 134 TRLVR----------GWTHLE-------RQKGGIG-LRGPGETQLETDRRLLRGRIKNIN 175
Query: 270 SQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLF 329
++E V + R R AR+R + TV++VGYTNAGKSTL +AL+ SD+++ +LF
Sbjct: 176 KRLERVDKQREQSRRARKRSE------MPTVSLVGYTNAGKSTLFNALTSSDVYAADQLF 229
Query: 330 ATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
ATLDP L+ + LP G V+L+DTVGFI LP LV AF ATL+E +A+LL+H++DC N
Sbjct: 230 ATLDPTLRKLDLPDGAVILADTVGFIRHLPHDLVAAFKATLQETRQAELLLHIVDCADEN 289
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYID 435
+ ++ V VL+ + E + +I V NKID ++ +EY D
Sbjct: 290 MADNFEQVQSVLKDIEADE--VMQLI-VCNKIDLLEDVTPRIEYDD 332
>gi|170702833|ref|ZP_02893682.1| GTP-binding proten HflX [Burkholderia ambifaria IOP40-10]
gi|170132251|gb|EDT00730.1| GTP-binding proten HflX [Burkholderia ambifaria IOP40-10]
Length = 396
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 179/333 (53%), Gaps = 33/333 (9%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + ++ A ++ + N L+ QQRNLE+A + V+DR LI++
Sbjct: 52 AKMFIGSGKADELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILD 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L Y +RL+R T E R GG G
Sbjct: 108 IFAQRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG- 149
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I ER L S+++ +RR + QR R R G +V++VGY
Sbjct: 150 LRGPGETQLETDRRLIGERIKMLKSRLDRLRRQHSTQRRQRARSG------TMSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS--GKVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV
Sbjct: 204 TNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLV 263
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
AF ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKID
Sbjct: 264 AAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNGVLHEIGADTIR---QVLVFNKIDA 320
Query: 424 HDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
E + ++ D+ N SR T + +D
Sbjct: 321 VPELAARGDAVERDEYGNISRVFLSARTGQGLD 353
>gi|421496805|ref|ZP_15944012.1| GTP-binding protein HflX [Aeromonas media WS]
gi|407184192|gb|EKE58042.1| GTP-binding protein HflX [Aeromonas media WS]
Length = 428
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 170/300 (56%), Gaps = 36/300 (12%)
Query: 126 ADTFFGPGTVETIKCHIN--GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G E I + GA D + N L+ Q+RNLER + V+DR GLI
Sbjct: 54 AKFFVGSGKAEEIASQVQMLGA------DVVIFNHALTPAQERNLERLFQCRVVDRTGLI 107
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A T E KLQ ELA L + +RLVR G T R GG
Sbjct: 108 LDIFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGI 150
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR + ER +L ++++V + R R AR R+ + TV++V
Sbjct: 151 G-LRGPGETQLETDRRLLRERIKAILRRLDKVAKQREQGRRARNRNE------VPTVSLV 203
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQL 362
GYTNAGKSTL + L+D+ +++ +LFATLDP L+ +V+ G V+L+DTVGFI LP L
Sbjct: 204 GYTNAGKSTLFNQLTDASVYAADQLFATLDPTLRKLVIQDVGDVILADTVGFIRHLPHDL 263
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
V AF ATL+E EADLL+HV+DC ++E+ +V VL ++ E + + + NKID
Sbjct: 264 VAAFKATLQETREADLLLHVVDCADEQMQENVDSVQTVLAEI---EADDRPQLMICNKID 320
>gi|330831012|ref|YP_004393964.1| GTPase, HflX [Aeromonas veronii B565]
gi|423208343|ref|ZP_17194897.1| GTP-binding protein HflX [Aeromonas veronii AER397]
gi|328806148|gb|AEB51347.1| GTPase, HflX [Aeromonas veronii B565]
gi|404618188|gb|EKB15108.1| GTP-binding protein HflX [Aeromonas veronii AER397]
Length = 428
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E I + ++ D + N L+ Q+RNLER + V+DR GLI++
Sbjct: 54 AKFFVGSGKAEEIASQVQMLDA----DVVIFNHALTPAQERNLERLFQCRVVDRTGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER +L ++++V + R R AR R+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKAILRRLDKVAKQREQGRRARNRNE------VPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ + +++ +LFATLDP L+++V+ G V+L+DTVGFI LP LV
Sbjct: 206 TNAGKSTLFNQLTAASVYAADQLFATLDPTLRNLVIRDVGDVILADTVGFIRHLPHDLVA 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATL+E EADLL+HV+DC ++E+ +V QVL ++ E + + + NKID
Sbjct: 266 AFKATLQETREADLLLHVVDCADEQMQENIDSVQQVLAEI---EADDRPQLMICNKID 320
>gi|310658631|ref|YP_003936352.1| GTP-binding protein hflX [[Clostridium] sticklandii]
gi|308825409|emb|CBH21447.1| GTP-binding protein hflX [[Clostridium] sticklandii]
Length = 432
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/309 (38%), Positives = 169/309 (54%), Gaps = 40/309 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G E IK + N ++ + I N LSG Q RNLE G ++DR LI++IF
Sbjct: 65 YLGKGKAEEIKEYANNMQA----NLIVFNEELSGAQIRNLEEIIGLDIIDRTALILDIFA 120
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A ++E KLQ ELA Y+ RL+ V RL G +
Sbjct: 121 KRALSREGKLQVELAQYKYRLPRLIGVGKEMSRLGGGIGTKG------------------ 162
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE +L+ +R I ER + +++E+++ R +QR+ R + L VA+VGYTN+
Sbjct: 163 PGEKKLETDKRHIRERIYDIQRELKEIKKNREIQRSKRLKSN------LPIVALVGYTNS 216
Query: 309 GKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
GKSTL++ L +D D+F LFATLD L+ +LPS K L++DTVGF+SDLP
Sbjct: 217 GKSTLLNKLIQSHREYSADKDVFVKDMLFATLDVSLRKAILPSNKEYLITDTVGFVSDLP 276
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV+AF ATLEEV ADLL+HV+D + + T L VL+++G ++ K MI V+N
Sbjct: 277 HYLVEAFKATLEEVSYADLLLHVVDSSNEHFNLQIDTTLGVLKEIGAAD---KPMIYVFN 333
Query: 420 KIDYHDEEM 428
K D + E+
Sbjct: 334 KADKVNYEL 342
>gi|170729308|ref|YP_001774741.1| GTP-binding protein [Xylella fastidiosa M12]
gi|167964101|gb|ACA11111.1| GTP-binding protein [Xylella fastidiosa M12]
Length = 450
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 168/295 (56%), Gaps = 30/295 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G ++ IK A++ G D I +N LS +Q+RNLE++ + V+DR GLI++IF
Sbjct: 56 TLISSGKLKEIK---ETADATGA-DLILINHSLSPVQERNLEKSLERRVIDRTGLILDIF 111
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A + E KLQ ELA L + +RLVR G + RG G RG
Sbjct: 112 AQRACSHEGKLQVELAQLRHLATRLVR-------------GWTHLERQRGGAIGLRG--- 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR + +R L ++ +V R R AR R + +A+VGYTN
Sbjct: 156 -PGETQLETDRRLLQKRVEQLQKRLSKVEVQRTQMRRARVRSE------VPRIALVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
+GKSTL +AL+ + ++ +LFATLDP+++ +VLP +L+DTVGF+ LP +LV AF
Sbjct: 209 SGKSTLFNALTGASAYTADQLFATLDPKVRRIVLPGSSAMLADTVGFVRHLPHELVAAFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL E EADLL+HV+D P EE V +VLQ +G E L ++ V+NKID
Sbjct: 269 STLSEAREADLLLHVIDAADPLREERIDQVDEVLQAIGAGE--LPQLL-VFNKID 320
>gi|126451860|ref|YP_001066485.1| GTP-binding protein HflX [Burkholderia pseudomallei 1106a]
gi|134278019|ref|ZP_01764734.1| GTP-binding protein HflX [Burkholderia pseudomallei 305]
gi|167823873|ref|ZP_02455344.1| GTP-binding proten HflX [Burkholderia pseudomallei 9]
gi|167893954|ref|ZP_02481356.1| GTP-binding proten HflX [Burkholderia pseudomallei 7894]
gi|167918675|ref|ZP_02505766.1| GTP-binding proten HflX [Burkholderia pseudomallei BCC215]
gi|217421633|ref|ZP_03453137.1| GTP-binding protein HflX [Burkholderia pseudomallei 576]
gi|226197101|ref|ZP_03792678.1| GTP-binding protein HflX [Burkholderia pseudomallei Pakistan 9]
gi|237812542|ref|YP_002896993.1| GTP-binding protein HflX [Burkholderia pseudomallei MSHR346]
gi|242318079|ref|ZP_04817095.1| GTP-binding protein HflX [Burkholderia pseudomallei 1106b]
gi|254179558|ref|ZP_04886157.1| GTP-binding protein HflX [Burkholderia pseudomallei 1655]
gi|386861540|ref|YP_006274489.1| GTP-binding protein HflX [Burkholderia pseudomallei 1026b]
gi|403518913|ref|YP_006653046.1| GTP-binding proten HflX [Burkholderia pseudomallei BPC006]
gi|418539392|ref|ZP_13104988.1| GTP-binding protein HflX [Burkholderia pseudomallei 1026a]
gi|418540684|ref|ZP_13106209.1| GTP-binding protein HflX [Burkholderia pseudomallei 1258a]
gi|418546929|ref|ZP_13112115.1| GTP-binding protein HflX [Burkholderia pseudomallei 1258b]
gi|126225502|gb|ABN89042.1| GTP-binding protein HflX [Burkholderia pseudomallei 1106a]
gi|134251669|gb|EBA51748.1| GTP-binding protein HflX [Burkholderia pseudomallei 305]
gi|184210098|gb|EDU07141.1| GTP-binding protein HflX [Burkholderia pseudomallei 1655]
gi|217395375|gb|EEC35393.1| GTP-binding protein HflX [Burkholderia pseudomallei 576]
gi|225930480|gb|EEH26490.1| GTP-binding protein HflX [Burkholderia pseudomallei Pakistan 9]
gi|237504760|gb|ACQ97078.1| GTP-binding protein HflX [Burkholderia pseudomallei MSHR346]
gi|242141318|gb|EES27720.1| GTP-binding protein HflX [Burkholderia pseudomallei 1106b]
gi|385346016|gb|EIF52709.1| GTP-binding protein HflX [Burkholderia pseudomallei 1026a]
gi|385360818|gb|EIF66725.1| GTP-binding protein HflX [Burkholderia pseudomallei 1258a]
gi|385362728|gb|EIF68533.1| GTP-binding protein HflX [Burkholderia pseudomallei 1258b]
gi|385658668|gb|AFI66091.1| GTP-binding protein HflX [Burkholderia pseudomallei 1026b]
gi|403074555|gb|AFR16135.1| GTP-binding proten HflX [Burkholderia pseudomallei BPC006]
Length = 387
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 180/335 (53%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G + ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 47 AALFVGSGKADELRLACEAN------DVEIVIFNHALAPAQQRNLERVLNRRVIDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GET+L+ RR I ER L S+++++RR QR R R G +V++V
Sbjct: 144 G-LRGPGETQLETDRRLIGERIKMLKSRLDKLRRQHHTQRRQRARSG------TLSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 256
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V VL+++G + I V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIDQVNDVLREIGADSIR---QILVFNKI 313
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGGAVERDEYGNISRVFLSARTGQGLD 348
>gi|26991571|ref|NP_746996.1| GTP-binding protein HflX [Pseudomonas putida KT2440]
gi|148549971|ref|YP_001270073.1| HSR1-related GTP-binding protein [Pseudomonas putida F1]
gi|395445736|ref|YP_006385989.1| GTP-binding protein HflX [Pseudomonas putida ND6]
gi|397695351|ref|YP_006533233.1| GTP-binding protein HflX [Pseudomonas putida DOT-T1E]
gi|421523721|ref|ZP_15970350.1| GTP-binding protein HflX [Pseudomonas putida LS46]
gi|24986658|gb|AAN70460.1|AE016687_7 GTP-binding protein HflX [Pseudomonas putida KT2440]
gi|148514029|gb|ABQ80889.1| GTP-binding protein HflX [Pseudomonas putida F1]
gi|388559733|gb|AFK68874.1| GTP-binding protein HflX [Pseudomonas putida ND6]
gi|397332081|gb|AFO48440.1| GTP-binding protein HflX [Pseudomonas putida DOT-T1E]
gi|402752707|gb|EJX13212.1| GTP-binding protein HflX [Pseudomonas putida LS46]
Length = 433
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 174/298 (58%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE + ++ + +D + N L+ Q+RNLER + VLDR GLI++
Sbjct: 55 AKYLIGSGKVEELHDLVHAEQ----VDLVIFNHTLTPSQERNLERVFECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + S++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKSRLEKVRSQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL++S++++ +LFATLDP L+ + L G ++L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTESEVYAADQLFATLDPTLRRLELNDLGPIVLADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATLEE +DLL+HV+D P E VL VL ++G E L ++EV+NK+D
Sbjct: 267 AFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGA--EGLP-ILEVYNKLD 321
>gi|333398839|ref|ZP_08480652.1| GTP-binding protein HflX [Leuconostoc gelidum KCTC 3527]
gi|406600595|ref|YP_006745941.1| GTP-binding protein HflX [Leuconostoc gelidum JB7]
gi|406372130|gb|AFS41055.1| GTP-binding protein HflX [Leuconostoc gelidum JB7]
Length = 432
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 173/308 (56%), Gaps = 40/308 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A ++D I N LS Q RNLE+A VLDR GLI++IF
Sbjct: 59 TYFGKGKVE----ELAEAVKTYDVDMIVANDELSPSQIRNLEKATNATVLDRTGLILDIF 114
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ +LA L Y+ RL R + + + + GSGG GF S
Sbjct: 115 AQRAQTKEAKLQVQLARLQYQLPRL--------RTSMSVSLDQQT------GSGGSGFTS 160
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G+GET+L+ RRRI + H+ + ++++ R+ARR+ L VA+VGYT
Sbjct: 161 RGSGETKLEESRRRITAQMVHIRQDLSDLKKGDTT-RSARRQEN-----DLPNVALVGYT 214
Query: 307 NAGKSTLVSAL-------SDS----DLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGF 354
NAGKSTL++ L SD+ +F LFATL+ ++ + LP K LLSDTVGF
Sbjct: 215 NAGKSTLMNRLLERFGVGSDTADSKQVFEKDMLFATLNTTVRQLTLPDKKQFLLSDTVGF 274
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+S LP LV AF +TL+E ADLL+HV+D + + ++ T + L +VG+++ M
Sbjct: 275 VSKLPHNLVAAFQSTLQEAANADLLLHVVDVSDEHHKDMMATTEKTLSEVGITDIP---M 331
Query: 415 IEVWNKID 422
I ++NK D
Sbjct: 332 ITIYNKAD 339
>gi|300173994|ref|YP_003773160.1| GTP-binding protein HflX [Leuconostoc gasicomitatum LMG 18811]
gi|299888373|emb|CBL92341.1| GTP-binding protein HflX [Leuconostoc gasicomitatum LMG 18811]
Length = 432
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 173/308 (56%), Gaps = 40/308 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + + + +D I N LS Q RNLE+A VLDR GLI++IF
Sbjct: 59 TYFGKGKVEELAEAVKSYD----VDMIVANDELSPSQIRNLEKATNATVLDRTGLILDIF 114
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ +LA L Y+ RL R + + + + GSGG GF S
Sbjct: 115 AQRAQTKEAKLQVQLARLQYQLPRL--------RTSMSISLDQQT------GSGGSGFTS 160
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G+GET+L+ RRRI + H+ + ++++ R+ARR+ L VA+VGYT
Sbjct: 161 RGSGETKLEESRRRITAQMVHIRQDLSDLKKGDTT-RSARRQEN-----DLPNVALVGYT 214
Query: 307 NAGKSTLVSAL----------SDS-DLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGF 354
NAGKSTL++ L +DS +F LFATL+ ++ + LP K LLSDTVGF
Sbjct: 215 NAGKSTLMNRLLERFGVGSNTADSKQVFEKDMLFATLNTTVRQLTLPDKKQFLLSDTVGF 274
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+S LP LV AF +TL+E ADLL+HV+D + + ++ T + L +VG+++ M
Sbjct: 275 VSKLPHNLVAAFQSTLQEAANADLLLHVVDVSDEHHKDMMATTEKTLSEVGITDIP---M 331
Query: 415 IEVWNKID 422
I ++NK D
Sbjct: 332 ITIYNKAD 339
>gi|237708863|ref|ZP_04539344.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265755877|ref|ZP_06090344.1| GTP-binding protein HflX [Bacteroides sp. 3_1_33FAA]
gi|423242224|ref|ZP_17223333.1| GTP-binding protein HflX [Bacteroides dorei CL03T12C01]
gi|229457289|gb|EEO63010.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263233955|gb|EEZ19556.1| GTP-binding protein HflX [Bacteroides sp. 3_1_33FAA]
gi|392639510|gb|EIY33326.1| GTP-binding protein HflX [Bacteroides dorei CL03T12C01]
Length = 417
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 182/334 (54%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + Y D F E VV+ + K A + T+ G G +E IK +I+ E ++ E
Sbjct: 26 ERKTKEYLDELEFLAETAGATVVKRFTQKLPAANSVTYVGKGKLEEIKEYIHQEEENERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTLMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+
Sbjct: 249 TLDTTVRKVIIENLPFLLTDTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE + V + + + E K + V+NK+D +
Sbjct: 309 EEQISVVDKTIADL---EAGGKPTMIVFNKVDAY 339
>gi|332527859|ref|ZP_08403896.1| GTP-binding proten HflX [Rubrivivax benzoatilyticus JA2]
gi|332112436|gb|EGJ12229.1| GTP-binding proten HflX [Rubrivivax benzoatilyticus JA2]
Length = 371
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 167/299 (55%), Gaps = 32/299 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G + I+ + ++ G + + LS QQRNLER G PV DR LI++
Sbjct: 44 AALFVGSGKADEIRAMVAATQAHG----VIFDQALSPAQQRNLERHLGVPVADRTSLILD 99
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A A + E KLQ ELA L Y +RLVR R + E + +
Sbjct: 100 IFAARAQSHEGKLQVELARLQYVATRLVR------RWSHLERQRGGIGTR---------- 143
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GE +++L RR I ER + +++E+V++ R QR AR R RG V++VGY
Sbjct: 144 -GGPGEAQIELDRRMIGERIKSVKARLEKVKQQRGTQRRARER------RGTFRVSLVGY 196
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG--KVLLSDTVGFISDLPLQLV 363
TNAGKSTL +AL + ++ +LFATLD +S+ L V LSDTVGFI DLP +LV
Sbjct: 197 TNAGKSTLFNALVKAKTYAADQLFATLDTTTRSLWLGEAGMSVSLSDTVGFIRDLPHKLV 256
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+AF ATL E +ADLL+HV+D +P L E + V +VL+++G S I V+NK D
Sbjct: 257 EAFEATLREAADADLLLHVVDAASPALLEQQAEVERVLEEIGASG---VPQILVFNKCD 312
>gi|117618820|ref|YP_855468.1| GTP-binding protein HflX [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560227|gb|ABK37175.1| GTP-binding protein HflX [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 428
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 170/298 (57%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E I + ++ D + N L+ Q+RNLER + V+DR GLI++
Sbjct: 54 AKFFVGSGKAEEIASQVQMLDA----DVVIFNHALTPAQERNLERLFQCRVVDRTGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER +L ++++V + R R AR R+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKAILRRLDKVAKQREQGRRARNRNE------VPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ + +++ +LFATLDP L+ +V+ G V+L+DTVGFI LP LV
Sbjct: 206 TNAGKSTLFNQLTAASVYAADQLFATLDPTLRKLVIQDVGDVILADTVGFIRHLPHDLVA 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATL+E EADLL+HV+DC ++E+ +V QVL ++ E + + + NKID
Sbjct: 266 AFKATLQETREADLLLHVVDCADEQMQENIESVQQVLAEI---EADDRPQLMICNKID 320
>gi|300767708|ref|ZP_07077618.1| GTP-binding protein HflX [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308179890|ref|YP_003924018.1| GTPase [Lactobacillus plantarum subsp. plantarum ST-III]
gi|380031861|ref|YP_004888852.1| GTPase, HflX subfamily [Lactobacillus plantarum WCFS1]
gi|300494693|gb|EFK29851.1| GTP-binding protein HflX [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045381|gb|ADN97924.1| GTPase [Lactobacillus plantarum subsp. plantarum ST-III]
gi|342241104|emb|CCC78338.1| GTPase, HflX subfamily [Lactobacillus plantarum WCFS1]
Length = 431
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 168/303 (55%), Gaps = 31/303 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TFFG G V IK + +L + +NA L+ Q RNLE ++DR GLI+EIF
Sbjct: 57 TFFGKGKVVEIK----EVAAANDLHIMVINADLTPSQVRNLEEQTDIQIIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL R + + + +A G G G
Sbjct: 113 GNRARSKEAKLQVKIAQLQYQLPRL--------RTSISNRLDQQAGAAAGGGGGFTN--R 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR I +R SH +++E+ + V+R+ R D GL VA+VGYTN
Sbjct: 163 GAGETQLELNRRTIQDRISHAKHELKELNKDEVVRRSQR------DKAGLPNVALVGYTN 216
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKST ++ L D +F LFATLD ++ + P K +LLSDTVGF+SDLP
Sbjct: 217 AGKSTTMNGLVKLFGKGEDKQVFEKDMLFATLDTSIRQLTFPDNKQLLLSDTVGFVSDLP 276
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
L++AF +TL E ADLL+ V+D P+ +E T + L+++GV + MI +N
Sbjct: 277 HNLINAFRSTLAEAANADLLIQVIDYADPHYKEMMATTEKTLKEIGVHDVP---MIYAFN 333
Query: 420 KID 422
K D
Sbjct: 334 KAD 336
>gi|167035934|ref|YP_001671165.1| GTP-binding proten HflX [Pseudomonas putida GB-1]
gi|386014166|ref|YP_005932443.1| protein HflX [Pseudomonas putida BIRD-1]
gi|166862422|gb|ABZ00830.1| GTP-binding proten HflX [Pseudomonas putida GB-1]
gi|313500872|gb|ADR62238.1| HflX [Pseudomonas putida BIRD-1]
Length = 433
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 174/298 (58%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE + ++ + +D + N L+ Q+RNLER + VLDR GLI++
Sbjct: 55 AKYLIGSGKVEELHDLVHAEQ----VDLVIFNHTLTPSQERNLERVFECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + S++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKSRLEKVRSQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL++S++++ +LFATLDP L+ + L G ++L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTESEVYAADQLFATLDPTLRRLELNDLGPIVLADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATLEE +DLL+HV+D P E VL VL ++G E L ++EV+NK+D
Sbjct: 267 AFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGA--EGLP-ILEVYNKLD 321
>gi|387902349|ref|YP_006332688.1| GTP-binding protein HflX [Burkholderia sp. KJ006]
gi|387577241|gb|AFJ85957.1| GTP-binding protein HflX [Burkholderia sp. KJ006]
Length = 343
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 178/330 (53%), Gaps = 33/330 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E ++ A ++ + N L+ QQRNLE+A + V+DR LI++IF
Sbjct: 2 FIGSGKAEELRL----ACDAHNVEIVIFNHALAPAQQRNLEQALNRRVVDRTSLILDIFA 57
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L Y +RL+R T E R GG G + G
Sbjct: 58 QRARSHEGKLQVELAQLQYLSTRLIRA------WTHLE-----------RQKGGIG-LRG 99
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I ER L ++++ +RR + QR R R G +V++VGYTNA
Sbjct: 100 PGETQLETDRRLIGERIKMLKARLDRLRRQHSTQRRQRARSG------TMSVSLVGYTNA 153
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQLVDAF 366
GKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP QLV AF
Sbjct: 154 GKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQLVAAF 213
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEE + ADLL+HV+D ++ E V VL ++G + + V+NKID E
Sbjct: 214 RATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLHEIGADTVR---QVLVFNKIDAVPE 270
Query: 427 EMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
+ ++ D+ N SR T + +D
Sbjct: 271 LAARGDAVERDEYGNISRVFLSARTGQGLD 300
>gi|431804715|ref|YP_007231618.1| GTP-binding protein HflX [Pseudomonas putida HB3267]
gi|430795480|gb|AGA75675.1| GTP-binding protein HflX [Pseudomonas putida HB3267]
Length = 433
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 174/298 (58%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE + ++ + +D + N L+ Q+RNLER + VLDR GLI++
Sbjct: 55 AKYLIGSGKVEELHDLVHAEQ----VDLVIFNHTLTPSQERNLERVFECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + S++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKSRLEKVRSQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL++S++++ +LFATLDP L+ + L G ++L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTESEVYAADQLFATLDPTLRRLELNDLGPIVLADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATLEE +DLL+HV+D P E VL VL ++G E L ++EV+NK+D
Sbjct: 267 AFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGA--EGLP-ILEVYNKLD 321
>gi|411010558|ref|ZP_11386887.1| GTP-binding protein HflX [Aeromonas aquariorum AAK1]
gi|423198006|ref|ZP_17184589.1| GTP-binding protein HflX [Aeromonas hydrophila SSU]
gi|404630817|gb|EKB27467.1| GTP-binding protein HflX [Aeromonas hydrophila SSU]
Length = 428
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 170/298 (57%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E I + ++ D + N L+ Q+RNLER + V+DR GLI++
Sbjct: 54 AKFFVGSGKAEEIASQVQMLDA----DVVIFNHALTPAQERNLERLFQCRVVDRTGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER +L ++++V + R R AR R+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKAILRRLDKVAKQREQGRRARNRNE------VPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ + +++ +LFATLDP L+ +V+ G V+L+DTVGFI LP LV
Sbjct: 206 TNAGKSTLFNQLTAASVYAADQLFATLDPTLRKLVIRDVGDVILADTVGFIRHLPHDLVA 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATL+E EADLL+HV+DC ++E+ +V QVL ++ E + + + NKID
Sbjct: 266 AFKATLQETREADLLLHVVDCADEQMQENIESVQQVLAEI---EADDRPQLMICNKID 320
>gi|375136070|ref|YP_004996720.1| GTP-binding protein [Acinetobacter calcoaceticus PHEA-2]
gi|325123515|gb|ADY83038.1| GTP-binding protein [Acinetobacter calcoaceticus PHEA-2]
Length = 447
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 184/318 (57%), Gaps = 36/318 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ ++ K F G G VE I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHIKVQRNKPNPKFFIGSGKVEEI------AEQVQELEASLVIFDHALSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G + +
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GWSADF 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GET+L+ RR I R + L ++++V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGETQLETDRRLIRVRITQLKDKLDKVQQTRMQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLS 349
+ TV++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ + G V+L+
Sbjct: 197 ----AAIPTVSLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTVVLA 252
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++ ++ + V VL+ +G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSHDMLDQIEAVEGVLKDIGADAP 312
Query: 410 KLKNMIEVWNKIDYHDEE 427
L+ V+NKID EE
Sbjct: 313 VLR----VYNKIDLSGEE 326
>gi|449105877|ref|ZP_21742569.1| GTP-binding protein HflX [Treponema denticola ASLM]
gi|451967616|ref|ZP_21920845.1| GTP-binding protein HflX [Treponema denticola US-Trep]
gi|448966445|gb|EMB47100.1| GTP-binding protein HflX [Treponema denticola ASLM]
gi|451703402|gb|EMD57768.1| GTP-binding protein HflX [Treponema denticola US-Trep]
Length = 391
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/353 (37%), Positives = 182/353 (51%), Gaps = 45/353 (12%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPP---HVVVQNPSLKSGKARADTFFGPG 133
LQ K EAL +EE+ F K L + +NP+ T G G
Sbjct: 33 LQEKNTEAL---KEIEEKELKSLVETIFLKPLSSLRFRIAKENPA---------TLVGSG 80
Query: 134 TVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHT 193
+E I I + D + N+ +S QRNLE A+ V+DR +II+IF A T
Sbjct: 81 QLEKIAQAIEEERA----DLVVFNSAVSPRIQRNLEAAFNTCVIDRSEVIIQIFADRAQT 136
Query: 194 KEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETE 253
+EA LQAELA L Y RL R R T + RG G RG GAGE +
Sbjct: 137 REAVLQAELARLEYSMPRLTR------RWT-------SLAQQRGGAKGTRGASRGAGEKK 183
Query: 254 LQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTL 313
L+L RRR+ + L ++E VR R+ QR + R G G A+VGYTNAGKS+L
Sbjct: 184 LELDRRRLKTEIAKLKKEVERVRLQRSEQR--KTRLNGDKKIG----AIVGYTNAGKSSL 237
Query: 314 VSALSDSDLFSDARLFATLDPRLKSVVLPSG----KVLLSDTVGFISDLPLQLVDAFHAT 369
+ LS +++F++ +LFATLD + V L +G ++LL+DTVGF+S+LP QL+DAF +T
Sbjct: 238 LKKLSGAEVFTEDKLFATLDAETRKVFLQTGEKNIQILLTDTVGFVSNLPHQLIDAFRST 297
Query: 370 LEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
LEE AD L+ V D P + E +VL ++ S+ K I NK+D
Sbjct: 298 LEEAALADFLIIVCDAAHPAMPECLEVTKKVLDELSCSD---KPSIIAINKMD 347
>gi|406675767|ref|ZP_11082954.1| GTP-binding protein HflX [Aeromonas veronii AMC35]
gi|423202838|ref|ZP_17189417.1| GTP-binding protein HflX [Aeromonas veronii AER39]
gi|423203899|ref|ZP_17190455.1| GTP-binding protein HflX [Aeromonas veronii AMC34]
gi|404614434|gb|EKB11433.1| GTP-binding protein HflX [Aeromonas veronii AER39]
gi|404627157|gb|EKB23963.1| GTP-binding protein HflX [Aeromonas veronii AMC35]
gi|404628265|gb|EKB25049.1| GTP-binding protein HflX [Aeromonas veronii AMC34]
Length = 428
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 170/298 (57%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E I + ++ D + N L+ Q+RNLER + V+DR GLI++
Sbjct: 54 AKFFVGSGKAEEIASQVQMLDA----DVVIFNHALTPAQERNLERLFQCRVVDRTGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 110 IFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + ER +L ++++V + R R AR R+ + TV++VGY
Sbjct: 152 LRGPGETQLETDRRLLRERIKAILRRLDKVAKQREQGRRARNRNE------VPTVSLVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ + +++ +LFATLDP L+ +V+ G V+L+DTVGFI LP LV
Sbjct: 206 TNAGKSTLFNQLTAASVYAADQLFATLDPTLRKLVIRDVGDVILADTVGFIRHLPHDLVA 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATL+E EADLL+HV+DC ++E+ +V QVL ++ E + + + NKID
Sbjct: 266 AFKATLQETREADLLLHVVDCADEQMQENIDSVQQVLAEI---EADDRPQLMICNKID 320
>gi|325271234|ref|ZP_08137779.1| GTP-binding protein HflX [Pseudomonas sp. TJI-51]
gi|324103637|gb|EGC00939.1| GTP-binding protein HflX [Pseudomonas sp. TJI-51]
Length = 433
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 174/298 (58%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE + ++ + +D + N L+ Q+RNLER + VLDR GLI++
Sbjct: 55 AKYLIGSGKVEELHDLVHAEQ----VDLVIFNHTLTPSQERNLERVFECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + S++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKSRLEKVRSQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL++S++++ +LFATLDP L+ + L G ++L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTESEVYAADQLFATLDPTLRRLELNDLGPIVLADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATLEE +DLL+HV+D P E VL VL ++G E L ++EV+NK+D
Sbjct: 267 AFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGA--EGLP-ILEVYNKLD 321
>gi|390556625|ref|ZP_10243046.1| putative GTP-binding protein ynbA [Nitrolancetus hollandicus Lb]
gi|390174793|emb|CCF82329.1| putative GTP-binding protein ynbA [Nitrolancetus hollandicus Lb]
Length = 463
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 27/272 (9%)
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D + V+ L Q RNLE A V+DR LI++IF A T E +LQ ELA L Y+ R
Sbjct: 109 DVVLVDDELPPAQLRNLEEALEVKVIDRTALILDIFARRAQTHEGRLQVELAQLEYRLPR 168
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L R+ R G G + G GET+L+ RR+ +R + + Q
Sbjct: 169 LTRMWTHLSRQAVGGVG-----------------LRGPGETQLEADRRQARQRIAFIKQQ 211
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
++EV R R + R R++ + VA+VGYTNAGKSTL++ L+ + + ++ +LFAT
Sbjct: 212 LDEVHRHRQLYRERRQKEN------IPIVALVGYTNAGKSTLLNTLAGASVLAEDKLFAT 265
Query: 332 LDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
LDP + + LP G VL++DTVGFI+ LP L+ AF ATLEE++EA +LVHVLD T P
Sbjct: 266 LDPTTRRIELPGGHHVLVTDTVGFINKLPTLLIAAFRATLEEILEAAVLVHVLDVTHPKS 325
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
E TV QV++++G + + +I NKID
Sbjct: 326 AEQAETVRQVIEELGADD---RPVITALNKID 354
>gi|288929501|ref|ZP_06423345.1| GTP-binding protein HflX [Prevotella sp. oral taxon 317 str. F0108]
gi|288329006|gb|EFC67593.1| GTP-binding protein HflX [Prevotella sp. oral taxon 317 str. F0108]
Length = 414
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 171/298 (57%), Gaps = 21/298 (7%)
Query: 128 TFFGPGTVETIKCHINGAE-SKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
T+ G G +E IK +I E ++ E+ + + LS Q RN+E+ +LDR LI++I
Sbjct: 62 TYVGKGKLEEIKQYILAEEEAEREVGMVIFDDELSAKQMRNIEKELNVKILDRTSLILDI 121
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A T AK Q ELA Y RL R+ E + + G G +
Sbjct: 122 FAMRAQTANAKTQVELAQYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGL 172
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+L++ RR IL R + L ++ E+ + + QR R R + VA+VGYT
Sbjct: 173 RGPGETQLEMDRRIILSRMALLKERLAEIDKQKTTQRKNRGR--------MVRVALVGYT 224
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAF 366
N GKST+++ L+ S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP LVD+F
Sbjct: 225 NVGKSTIMNLLAKSEVFAENKLFATLDTTVRKVVVENLPFLLADTVGFIRKLPTDLVDSF 284
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+TL+EV EADLLVHV+D + P+ EE V + L ++ +++ +MI V+NKID +
Sbjct: 285 KSTLDEVREADLLVHVVDISHPDFEEQIAVVEKTLTELDCADK--PSMI-VFNKIDNY 339
>gi|373857385|ref|ZP_09600127.1| GTP-binding proten HflX [Bacillus sp. 1NLA3E]
gi|372453035|gb|EHP26504.1| GTP-binding proten HflX [Bacillus sp. 1NLA3E]
Length = 419
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 181/345 (52%), Gaps = 33/345 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V+ + S K + T+ G G +E +K E + E D I N LS Q RNL R
Sbjct: 43 VMISVSQKRDRVHPATYIGKGKIEELK----ALEDELEPDLIIFNDELSSTQIRNLSREL 98
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
V+DR LI++IF A +KE KLQ E A L Y RLV G+
Sbjct: 99 DARVIDRTQLILDIFATRARSKEGKLQVEYAQLQYMLPRLV--------------GQGTS 144
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+S G G G RG GET+L+ RR I R + SQ+ + R R R+++
Sbjct: 145 MSRLGAGIGTRG----PGETKLESDRRHIRRRIDDIKSQLTVIVGHRDRYRERRKKNKAF 200
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
+A+VGYTNAGKSTL + L+++D + +LFATLDP + ++LPSG L +DT
Sbjct: 201 Q------IAIVGYTNAGKSTLFNRLTEADTLEENQLFATLDPTTRKMILPSGFTTLTTDT 254
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+ DLP L+ AF +TLEEV EADLL+HV+DC+ P+ +H TV +L+++ E +
Sbjct: 255 VGFLQDLPTTLIAAFRSTLEEVNEADLLLHVVDCSNPDYFQHEKTVQHLLEEL---ENQH 311
Query: 412 KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
+ V+NK D + V + IS F ED+ + V+
Sbjct: 312 LPQLTVYNKKDMMQPDFVPVAKTETITISAFEE-EDRQKLKQKVE 355
>gi|296111471|ref|YP_003621853.1| GTPase [Leuconostoc kimchii IMSNU 11154]
gi|295833003|gb|ADG40884.1| GTPase [Leuconostoc kimchii IMSNU 11154]
Length = 432
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/308 (40%), Positives = 171/308 (55%), Gaps = 40/308 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A E+D I N LS Q RNLE+A VLDR GLI++IF
Sbjct: 59 TYFGKGKVE----ELAEAVKTYEVDMIVANDELSPSQIRNLEKATQATVLDRTGLILDIF 114
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ +LA L Y+ RL R + + + + G+GG GF S
Sbjct: 115 AQRAQTKEAKLQVQLARLQYQLPRL--------RTSMSVSLDQQT------GAGGGGFTS 160
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L+ RRRI + H+ + ++ T+ A +RH L VA+VGYT
Sbjct: 161 RGAGETKLEESRRRITAQMVHIRQDLADL--TKGETTRASKRHTND----LPNVALVGYT 214
Query: 307 NAGKSTLVSAL-------SDSD----LFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGF 354
NAGKSTL++ L +D+D +F LFATL+ ++ + LP K LLSDTVGF
Sbjct: 215 NAGKSTLMNRLLERFGVGADNDESKQVFEKDMLFATLNTTIRQLTLPDKKQFLLSDTVGF 274
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+S LP LV AF +TL+E ADLL+ V+D + + +E T + L +VGVS+ M
Sbjct: 275 VSKLPHNLVAAFKSTLQEAAHADLLLQVVDISDEHYKEMMATTEKTLAEVGVSDVP---M 331
Query: 415 IEVWNKID 422
I ++NK D
Sbjct: 332 ITIYNKAD 339
>gi|89898550|ref|YP_515660.1| GTP-binding protein [Chlamydophila felis Fe/C-56]
gi|89331922|dbj|BAE81515.1| GTP-binding protein [Chlamydophila felis Fe/C-56]
Length = 452
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 160/273 (58%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFASRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L S
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTS 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ +++ +LFA
Sbjct: 207 DLKAVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYAEDKLFA 260
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLP G +VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPCGQRVLVTDTVGFIRKLPHALVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T +LQ +G+ K +I V NKID
Sbjct: 321 AFEHVETTKGILQDLGIEHPK---IITVLNKID 350
>gi|50086023|ref|YP_047533.1| GTP-binding protein [Acinetobacter sp. ADP1]
gi|49531999|emb|CAG69711.1| GTP-binding protein [Acinetobacter sp. ADP1]
Length = 444
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 178/308 (57%), Gaps = 36/308 (11%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRV 180
K A F G G E I AE LDA + + LS Q+RNLE+ V+DR
Sbjct: 52 KPDAKLFIGSGKAEEI------AERVEALDASLVIFDHALSPAQERNLEKIMKCRVIDRT 105
Query: 181 GLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGS 240
GLI++IF A T E KLQ ELA L + +RLVR G +G E +
Sbjct: 106 GLILDIFAQRARTHEGKLQVELAQLKHLSTRLVR----------GWSGGFE------QQK 149
Query: 241 GGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATV 300
GG G + G GET+L+ RR I R L ++++V++TR RAAR++ + TV
Sbjct: 150 GGIG-LRGPGETQLETDRRLIRIRMIQLKDKLDKVQQTRLQGRAARQK------AAIPTV 202
Query: 301 AVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLP 359
++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ + G V+L+DTVGF+ +L
Sbjct: 203 SLVGYTNAGKSTLFNHLANSDVYAADQLFATLDPTLRRLDWDGIGTVVLADTVGFVRNLQ 262
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
L+++F ATLEE +EA LL+H++D ++P++ E V VL+++G L+ V+N
Sbjct: 263 HDLIESFKATLEETLEATLLLHIIDSSSPDMLEQIEAVEGVLKEIGADAPVLR----VYN 318
Query: 420 KIDYHDEE 427
KID +E
Sbjct: 319 KIDVSGDE 326
>gi|29347668|ref|NP_811171.1| GTP-binding protein [Bacteroides thetaiotaomicron VPI-5482]
gi|298383464|ref|ZP_06993025.1| GTP-binding protein HflX [Bacteroides sp. 1_1_14]
gi|29339569|gb|AAO77365.1| GTP-binding protein [Bacteroides thetaiotaomicron VPI-5482]
gi|298263068|gb|EFI05931.1| GTP-binding protein HflX [Bacteroides sp. 1_1_14]
Length = 419
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 181/334 (54%), Gaps = 20/334 (5%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI-NGAESKGE 150
E + + Y D F E VV+ + K A + T+ G G +E I+ +I E + E
Sbjct: 26 ERKTNEYLDELAFLAETAGAEVVKRFTQKLPTANSVTYVGKGKLEEIRQYIRTEEEEERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ + S G G GG + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL--------WTHLERQGGGSGSGSGKGGSVGLRGPGETQLEMDRRIILNRMSLLKE 197
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + +A QR R R + VA+VGYTN GKST+++ L+ S++F++ +LFA
Sbjct: 198 RLAEIDKQKATQRKNRGR--------MIRVALVGYTNVGKSTIMNLLAKSEVFAENKLFA 249
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLLVHV+D + P
Sbjct: 250 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLVHVVDISHPGF 309
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE V + L +G K MI ++NKID +
Sbjct: 310 EEQIEVVNKTLADIGGGG---KPMILIFNKIDAY 340
>gi|262281583|ref|ZP_06059361.1| GTP-binding protein HflX [Acinetobacter calcoaceticus RUH2202]
gi|262256959|gb|EEY75699.1| GTP-binding protein HflX [Acinetobacter calcoaceticus RUH2202]
Length = 447
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 182/318 (57%), Gaps = 36/318 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ ++ K F G G VE I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHIKVQRNKPNPKFFIGSGKVEEI------AERVQELEASLVIFDHALSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G + +
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GWSADF 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GET+L+ RR I R + L ++E+V +TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGETQLETDRRLIRVRIAQLKDKLEKVHQTRIQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLS 349
+ TV++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + G V+L+
Sbjct: 197 ----AAIPTVSLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLA 252
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGF+ +L LV++F ATLEE +EA LL+HV+D + ++ + V VL+++G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSNSHDMLDQIEAVEGVLKEIGADAP 312
Query: 410 KLKNMIEVWNKIDYHDEE 427
L+ V+NKID EE
Sbjct: 313 VLR----VYNKIDLSGEE 326
>gi|118587116|ref|ZP_01544545.1| GTPase [Oenococcus oeni ATCC BAA-1163]
gi|421187025|ref|ZP_15644405.1| GTPase [Oenococcus oeni AWRIB418]
gi|118432395|gb|EAV39132.1| GTPase [Oenococcus oeni ATCC BAA-1163]
gi|399964732|gb|EJN99367.1| GTPase [Oenococcus oeni AWRIB418]
Length = 437
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 192/358 (53%), Gaps = 49/358 (13%)
Query: 86 CLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSL------KSGKARADTFFGPGTVETIK 139
+ ++E Q++ D D+ +E V N + K + A T+FG G VE +K
Sbjct: 15 VILTAIENQKNSQ-DFDYAIEEFKNLAVADNLEVVDVLTQKYDRPSAATYFGKGKVEELK 73
Query: 140 CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPV--LDRVGLIIEIFNAHAHTKEAK 197
+N E++ + N L+ Q RNLE+ V +DR GLI++IF A A TK AK
Sbjct: 74 ELVNAKEAR----LVISNDDLTATQIRNLEKMIASDVRVVDRTGLILDIFAARAKTKIAK 129
Query: 198 LQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS-GAGETELQL 256
LQ LA Y+ RL T A + + G+GG F S G+GET+L+L
Sbjct: 130 LQVRLAQKQYQLPRL-------------HTSLANELDQQA-GAGGASFTSRGSGETKLEL 175
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I E+ S + ++++ + + VQR R D GL VA+VGYTNAGKST ++
Sbjct: 176 NRRTIEEQISQIKTELKSLLSSSTVQRKRR------DNSGLKRVALVGYTNAGKSTWMNR 229
Query: 317 L--------SDSD---LFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVD 364
+ +DS+ +F LFATLD ++S+ LP+ + LLSDTVGFIS+LP LV
Sbjct: 230 IVERYSQIGNDSEEKKVFEKDMLFATLDSTVRSIRLPNKRQFLLSDTVGFISNLPHNLVA 289
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+F +TLEE +DLLV ++D + P+ + TT + L+Q+G + M+ ++NK D
Sbjct: 290 SFQSTLEEASNSDLLVQIVDVSDPHYRDMLTTTSKTLRQIGAEQIP---MVTIFNKAD 344
>gi|319953161|ref|YP_004164428.1| gtp-binding protein hflx [Cellulophaga algicola DSM 14237]
gi|319421821|gb|ADV48930.1| GTP-binding protein HflX [Cellulophaga algicola DSM 14237]
Length = 403
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 179/326 (54%), Gaps = 39/326 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G + ++ ++ + E+ + + LS QQRN+E+ +LDR LI++IF
Sbjct: 60 TYIGSGKMMDVEAYV----EEHEIGCVIFDDELSPAQQRNIEKQLKCKILDRTHLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
+ A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 SQRAQTSYARTQVELAQYEYLLPRL------KGLWTHLE-----------RQKGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ ++ R QR R L VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDRITLLKKKLLKIDRQMETQRGNRG--------ALVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S SD+F++ +LFATLD ++ VV+ + LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNVVSKSDVFAENKLFATLDTTVRKVVVGNLPFLLSDTVGFIRKLPTQLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV EADLL+HV+D + P EEH +V ++L ++G ++K I V+NKID E
Sbjct: 270 STLDEVREADLLLHVVDISHPQFEEHIASVNKILGEIGSGDKK---TIMVFNKIDQFTHE 326
Query: 428 MGDVEYIDGDDISNFSRAEDKDTTSE 453
ID DD+ R E+ T E
Sbjct: 327 T-----IDDDDLIT-ERTEEHFTLDE 346
>gi|258647896|ref|ZP_05735365.1| GTP-binding protein HflX [Prevotella tannerae ATCC 51259]
gi|260851729|gb|EEX71598.1| GTP-binding protein HflX [Prevotella tannerae ATCC 51259]
Length = 421
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 183/334 (54%), Gaps = 21/334 (6%)
Query: 128 TFFGPGTVETIKCHINGAE-SKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
T+ G G +E I+ +I E ++ +D + + LS Q RN+E+ V+DR LI++I
Sbjct: 62 TYVGKGKIEEIRDYIIAEEEAERAIDLVIFDDELSAKQLRNIEKEINVRVVDRTNLILDI 121
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A T AK Q ELA Y RL R+ E + + G G +
Sbjct: 122 FAMRAQTANAKTQVELAQYKYMLPRLQRM---------WTHLERQGGGSGSGGGKGSVGL 172
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+L++ RR IL R + L ++ ++ R + QR G+ G+ + VA+VGYT
Sbjct: 173 RGPGETQLEMDRRIILNRMALLKQRLADIDRQKKTQR-------GNRGK-MIRVALVGYT 224
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAF 366
N GKSTL++ +S S++F++ +LFATLD ++ VV+ + LL+DTVGFI +P LVD+F
Sbjct: 225 NVGKSTLLNLMSKSEVFAENKLFATLDTTVRKVVIDNLPFLLTDTVGFIRKIPTDLVDSF 284
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
+TL+EV EADLL+HV+D + P+ EE V + L ++G S + I V+NKID +
Sbjct: 285 KSTLDEVREADLLLHVVDISHPDFEEQIQVVEKTLAELGTSG---RPSILVFNKIDAYRW 341
Query: 427 EMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECI 460
+ + + N S AE + T + CI
Sbjct: 342 IEKEADDLTPKQKENISLAELQQTYMAKMQENCI 375
>gi|184201224|ref|YP_001855431.1| putative GTP-binding protein HflX [Kocuria rhizophila DC2201]
gi|183581454|dbj|BAG29925.1| putative GTP-binding protein HflX [Kocuria rhizophila DC2201]
Length = 552
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 162/283 (57%), Gaps = 24/283 (8%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +K + + D + V+A L+ Q+R LE V+DR GLI++IF
Sbjct: 168 TYLGSGKALELKDVVAATGA----DTVIVDAELAPSQRRALEDVVKVKVIDRTGLILDIF 223
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
HA +KE K Q ELA L Y L R+RG GE+ A GR + G G S
Sbjct: 224 AQHAKSKEGKAQVELAQLEYM---LPRLRG---------WGESLSRQAGGRAASGEGIGS 271
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+++L RRRI +R + L +I ++ R +R RRR+ + +VA+ GYT
Sbjct: 272 RGPGETKIELDRRRIRQRMAKLRREIAAMKPARETKRLNRRRNA------VPSVAIAGYT 325
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDA 365
NAGKS+L++ L+D+ + + LFATLDP ++ P G L+DTVGF+ LP QLV+A
Sbjct: 326 NAGKSSLLNRLTDAGVLVENALFATLDPTVRKAQTPDGIGYTLADTVGFVRSLPTQLVEA 385
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 408
F +TLEEV +AD++VHV+D + P+ E V VL VG ++
Sbjct: 386 FRSTLEEVADADVIVHVVDASHPDPEGQLKAVRDVLTDVGAND 428
>gi|391230743|ref|ZP_10266949.1| GTP-binding protein HflX [Opitutaceae bacterium TAV1]
gi|391220404|gb|EIP98824.1| GTP-binding protein HflX [Opitutaceae bacterium TAV1]
Length = 435
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 184/340 (54%), Gaps = 36/340 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G E + + + D I ++ LS QQRN E+ G V+DR +I++IF
Sbjct: 67 TLLGSGKTEELIAR----AKELDCDLIVIDDHLSPAQQRNWEKLSGIAVIDREEVILDIF 122
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T+EA LQ LA + Y RL R A +R RG G +
Sbjct: 123 ADRAQTREAVLQVALARMEYSLPRLTR---------------AWTHLSRQRGKG---KMG 164
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ RR + +R + L ++ EVR+ R VQR R+R + T A+VGYTN
Sbjct: 165 GEGETQLEQDRRLVRDRITRLKKELGEVRKQRGVQRHKRQR------VPVPTAAIVGYTN 218
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAF 366
AGKS+L++ L+ S + ++ +LFATLDP + +VL K+L++DTVGFI LP LV+AF
Sbjct: 219 AGKSSLINTLTGSSVLAEDKLFATLDPTTRQLVLRGNQKLLVTDTVGFIRRLPHGLVEAF 278
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEE + AD L+HVLD TAPN+ H T L VL ++G E K ++ V+NK+D DE
Sbjct: 279 KATLEEALVADFLIHVLDVTAPNVAAHHATTLAVLGELGADE---KRILTVFNKVDAADE 335
Query: 427 -EMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGG 465
+ +D D I F A D VD C+D G
Sbjct: 336 PHLARARQLDRDGI--FLSARTGDGVPALVD-HCLDLIAG 372
>gi|260910112|ref|ZP_05916789.1| GTP-binding protein HflX [Prevotella sp. oral taxon 472 str. F0295]
gi|260635616|gb|EEX53629.1| GTP-binding protein HflX [Prevotella sp. oral taxon 472 str. F0295]
Length = 414
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 171/298 (57%), Gaps = 21/298 (7%)
Query: 128 TFFGPGTVETIKCHINGAE-SKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
T+ G G +E IK +I E ++ E+ + + LS Q RN+E+ +LDR LI++I
Sbjct: 62 TYVGKGKLEEIKQYILAEEEAEREVGMVIFDDELSAKQMRNIEKELNVKILDRTSLILDI 121
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A T AK Q ELA Y RL R+ E + + G G +
Sbjct: 122 FAMRAQTANAKTQVELAQYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGL 172
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+L++ RR IL R + L ++ E+ + + QR R R + VA+VGYT
Sbjct: 173 RGPGETQLEMDRRIILSRMALLKERLAEIDKQKTTQRKNRGR--------MVRVALVGYT 224
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAF 366
N GKST+++ L+ S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP LVD+F
Sbjct: 225 NVGKSTIMNLLAKSEVFAENKLFATLDTTVRKVVVENLPFLLADTVGFIRKLPTDLVDSF 284
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+TL+EV EADLLVHV+D + P+ EE V + L ++ +++ +MI V+NKID +
Sbjct: 285 KSTLDEVREADLLVHVVDISHPDFEEQIAVVEKTLTELDCADK--PSMI-VFNKIDNY 339
>gi|402831126|ref|ZP_10879818.1| GTP-binding protein HflX [Capnocytophaga sp. CM59]
gi|402282823|gb|EJU31350.1| GTP-binding protein HflX [Capnocytophaga sp. CM59]
Length = 405
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 173/312 (55%), Gaps = 38/312 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E + + + E+ + + L+ QQ N+E+ +LDR LI++IF
Sbjct: 60 TFIGTGKMEELTQFV----EENEIGTVIFDDELTPAQQNNIEKILRIKILDRTTLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYARTQVELAQYQYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++E + R A QR+ R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLETIDRQMATQRSNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ + LLSDTVGFI LP QL+++F
Sbjct: 210 VGKSTLMNLISKSEVFAENKLFATLDTTVRKVVIGNLPFLLSDTVGFIRKLPTQLIESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV +ADLL+HV+D + PN EEH +V Q+L ++ + K I V+NKID + +
Sbjct: 270 STLDEVRDADLLLHVVDISHPNFEEHIASVNQILGEI---QSINKPTIMVFNKIDAYTHQ 326
Query: 428 MGDVEYIDGDDI 439
ID DD+
Sbjct: 327 T-----IDQDDL 333
>gi|212693698|ref|ZP_03301826.1| hypothetical protein BACDOR_03218 [Bacteroides dorei DSM 17855]
gi|212663757|gb|EEB24331.1| GTP-binding protein HflX [Bacteroides dorei DSM 17855]
Length = 417
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 182/334 (54%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + Y D F E VV+ + K A + T+ G G +E IK +I+ E ++ E
Sbjct: 26 ERKTKEYLDELEFLAETAGATVVKRFTQKLPAANSVTYVGKGKLEEIKEYIHQEEENERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELRVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTLMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+
Sbjct: 249 TLDTTVRKVIIENLPFLLTDTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE + V + + + E K + V+NK+D +
Sbjct: 309 EEQISVVDKTIADL---EAGGKPTMIVFNKVDAY 339
>gi|293611451|ref|ZP_06693746.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826235|gb|EFF84605.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 447
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 184/318 (57%), Gaps = 36/318 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ ++ K F G G VE I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHVKVQRNKPNPKFFIGSGKVEEI------AEQVQELEASLVIFDHALSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G + +
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GWSADF 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GET+L+ RR I R + L ++++V++TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGETQLETDRRLIRVRITQLKDKLDKVQQTRMQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLS 349
+ T+++VGYTNAGKSTL + L++SD+++ +LFATLDP L+ + G V+L+
Sbjct: 197 ----AAIPTISLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTVVLA 252
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGF+ +L LV++F ATLEE +EA LL+HV+D ++ ++ + V VL+ +G
Sbjct: 253 DTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSHDMLDQIEAVEGVLKDIGADAP 312
Query: 410 KLKNMIEVWNKIDYHDEE 427
L+ V+NKID EE
Sbjct: 313 VLR----VYNKIDLSGEE 326
>gi|145300253|ref|YP_001143094.1| GTP-binding protein HflX [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418357699|ref|ZP_12960389.1| GTP-binding protein HflX [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142853025|gb|ABO91346.1| GTP-binding protein HflX [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356688938|gb|EHI53486.1| GTP-binding protein HflX [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 428
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 175/314 (55%), Gaps = 40/314 (12%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHIN--GAESKGELDAIFVNAILSGIQQRNLE 169
VV N S S K F G G E I + GA D + N L+ Q+RNLE
Sbjct: 44 VVTTNRSAPSAK----LFVGSGKAEEIASQVQMLGA------DVVIFNHALTPAQERNLE 93
Query: 170 RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGE 229
R + V+DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 94 RLFQCRVVDRTGLILDIFAQRARTHEGKLQVELAQLRHLSTRLVR----------GWTHL 143
Query: 230 AEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
R GG G + G GET+++ RR + ER +L ++++V + R R AR R+
Sbjct: 144 E-------RQKGGIG-LRGPGETQMETDRRLLRERIKAILRRLDKVAKQREQGRRARNRN 195
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLL 348
+ TV++VGYTNAGKSTL + L+ + +++ +LFATLDP L+ +V+ G V+L
Sbjct: 196 E------VPTVSLVGYTNAGKSTLFNQLTAASVYAADQLFATLDPTLRKLVIRDVGDVIL 249
Query: 349 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 408
+DTVGFI LP LV AF ATL+E EADLL+HV+DC ++E+ +V QVL ++ E
Sbjct: 250 ADTVGFIRHLPHDLVAAFKATLQETREADLLLHVVDCADEQMQENIDSVQQVLAEI---E 306
Query: 409 EKLKNMIEVWNKID 422
+ + + NKID
Sbjct: 307 ADDRPQLMICNKID 320
>gi|220931954|ref|YP_002508862.1| small GTP-binding protein [Halothermothrix orenii H 168]
gi|219993264|gb|ACL69867.1| small GTP-binding protein [Halothermothrix orenii H 168]
Length = 395
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 173/297 (58%), Gaps = 39/297 (13%)
Query: 129 FFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
+ G G ++ +K + NGA IF N L+ Q RNLE V+DR LI++I
Sbjct: 39 YIGKGKLKELKHLVFENGANL-----VIFDNE-LTPAQFRNLENFLETRVVDRTQLILDI 92
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F HAHT+E+KLQ ELA L Y RL TG+ E +S G G G
Sbjct: 93 FAQHAHTRESKLQVELAQLQYLLPRL--------------TGKGEELSRLGGGIGT---- 134
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+L++ RRRI +R L +++ V++ R +QR +R+ VA+VGYT
Sbjct: 135 RGPGETKLEIDRRRIEKRIYKLKQELKNVKKNRQIQRKSRKD---------PVVALVGYT 185
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDA 365
NAGKSTL++ L++++ +LFATLD L+ + LP GK +++SDTVGFI LP QLV +
Sbjct: 186 NAGKSTLLNTLTNANTEVADKLFATLDSTLRRLTLPFGKQIIISDTVGFIKKLPHQLVAS 245
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
F ATLEE+ EAD+L+HV+D + P LE H V VL+++GV K I V NKID
Sbjct: 246 FQATLEEIKEADILLHVVDSSEPELENHIKVVNAVLKELGVFH---KEKIMVLNKID 299
>gi|408356784|ref|YP_006845315.1| GTP-binding protein HflX [Amphibacillus xylanus NBRC 15112]
gi|407727555|dbj|BAM47553.1| putative GTP-binding protein HflX [Amphibacillus xylanus NBRC
15112]
Length = 406
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 169/311 (54%), Gaps = 32/311 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + T+ G G +E I I E +D I N LS Q RNL+
Sbjct: 38 VVDVITQKRNQPHPATYLGKGKIEEIDLIIESEE----IDLIIANDELSASQMRNLQNRT 93
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR LI++IF + A + E KLQ ELA Y RL G+
Sbjct: 94 GVSVIDRSQLILDIFASRATSNEGKLQVELAQYQYLLPRL--------------HGQGLA 139
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+S G G RG GET+L+ RR I R + + +++ V R R RR +
Sbjct: 140 LSRLAGGIGTRG----PGETKLESDRRHINRRINEIKRRLQTVVNQREQYRKRRRLNHTF 195
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
+ +A+VGYTNAGKSTL + L+DSD F + +LFATLDP + + LPSG +++DT
Sbjct: 196 N------IAIVGYTNAGKSTLFNRLTDSDSFEEDQLFATLDPMSRKLKLPSGLSAIITDT 249
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+ DLP +L+ AF +TLEEV EADL+ HV+D + P+ ++ + TVL++L+++
Sbjct: 250 VGFMQDLPTELIAAFKSTLEEVSEADLIFHVVDASHPDHDQQQATVLELLEELNADH--- 306
Query: 412 KNMIEVWNKID 422
M+ ++NK D
Sbjct: 307 IPMLTIYNKRD 317
>gi|449108279|ref|ZP_21744923.1| GTP-binding protein HflX [Treponema denticola ATCC 33520]
gi|449118958|ref|ZP_21755359.1| GTP-binding protein HflX [Treponema denticola H1-T]
gi|449121347|ref|ZP_21757699.1| GTP-binding protein HflX [Treponema denticola MYR-T]
gi|448951573|gb|EMB32386.1| GTP-binding protein HflX [Treponema denticola MYR-T]
gi|448951986|gb|EMB32795.1| GTP-binding protein HflX [Treponema denticola H1-T]
gi|448962129|gb|EMB42823.1| GTP-binding protein HflX [Treponema denticola ATCC 33520]
Length = 391
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 183/353 (51%), Gaps = 45/353 (12%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPP---HVVVQNPSLKSGKARADTFFGPG 133
LQ K EAL +EE+ F K L + +NP+ T G G
Sbjct: 33 LQEKSAEAL---KEIEEKELKSLVETIFLKPLSSLRFRIAKENPA---------TLVGSG 80
Query: 134 TVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHT 193
+E I I E +G D + N+ +S QRNLE A V+DR +II+IF A T
Sbjct: 81 QLEKIAQAI---EEEGA-DLVVFNSAVSPRIQRNLEAALNTCVIDRSEVIIQIFADRAQT 136
Query: 194 KEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETE 253
+EA LQAELA L Y RL R R T + RG G RG GAGE +
Sbjct: 137 REAVLQAELARLEYSMPRLTR------RWT-------SLAQQRGGAKGTRGASRGAGEKK 183
Query: 254 LQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTL 313
L+L RRR+ + L ++E VR R+ QR + R G G A+VGYTNAGKS+L
Sbjct: 184 LELDRRRLKTEITKLKKEVERVRLQRSEQR--KTRLNGDKKIG----AIVGYTNAGKSSL 237
Query: 314 VSALSDSDLFSDARLFATLDPRLKSVVLPSG----KVLLSDTVGFISDLPLQLVDAFHAT 369
+ LS +++F++ +LFATLD + V L +G ++LL+DTVGF+S+LP QL+DAF +T
Sbjct: 238 LKKLSGAEVFTEDKLFATLDAETRKVFLQTGEKNIQILLTDTVGFVSNLPHQLIDAFRST 297
Query: 370 LEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
LEE AD L+ V D P + E +VL ++ S+ K I NK+D
Sbjct: 298 LEEAALADFLIIVCDAAHPAMPECLEVTKKVLDELSCSD---KPSIIAINKMD 347
>gi|149369521|ref|ZP_01889373.1| GTP-binding protein HflX [unidentified eubacterium SCB49]
gi|149356948|gb|EDM45503.1| GTP-binding protein HflX [unidentified eubacterium SCB49]
Length = 403
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/312 (39%), Positives = 178/312 (57%), Gaps = 38/312 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E I+ +I E+ AIF + + G QQRN+E+ ++DR LI++IF
Sbjct: 60 TFVGTGKMEEIQAYI---EAHNIGTAIFDDELSPG-QQRNIEKILECKIIDRTYLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYARTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R S L ++ + + A QR R GS L VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDRISLLKKKMLAIDKQMATQRGNR----GS----LIRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S SD+F++ +LFATLD ++ VV+ + LL+DTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNVISKSDVFAENKLFATLDTTVRKVVIGNLPFLLTDTVGFIRKLPTQLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV EADLL+HV+D + + E+H +V +L ++ S+ K ++ V+NKID ++ E
Sbjct: 270 STLDEVREADLLLHVVDISHESFEDHIDSVNVILNEIKSSD---KPVLMVFNKIDAYEPE 326
Query: 428 MGDVEYIDGDDI 439
ID DD+
Sbjct: 327 T-----IDADDL 333
>gi|116490269|ref|YP_809813.1| GTPase [Oenococcus oeni PSU-1]
gi|290889655|ref|ZP_06552744.1| hypothetical protein AWRIB429_0134 [Oenococcus oeni AWRIB429]
gi|419759273|ref|ZP_14285578.1| GTPase [Oenococcus oeni AWRIB304]
gi|419857170|ref|ZP_14379880.1| GTPase [Oenococcus oeni AWRIB202]
gi|419858199|ref|ZP_14380877.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421183831|ref|ZP_15641260.1| GTPase [Oenococcus oeni AWRIB318]
gi|421193295|ref|ZP_15650544.1| GTPase [Oenococcus oeni AWRIB553]
gi|421195694|ref|ZP_15652898.1| GTPase [Oenococcus oeni AWRIB568]
gi|421196372|ref|ZP_15653561.1| GTPase [Oenococcus oeni AWRIB576]
gi|116090994|gb|ABJ56148.1| GTPase [Oenococcus oeni PSU-1]
gi|290480652|gb|EFD89287.1| hypothetical protein AWRIB429_0134 [Oenococcus oeni AWRIB429]
gi|399903968|gb|EJN91431.1| GTPase [Oenococcus oeni AWRIB304]
gi|399968468|gb|EJO02901.1| GTPase [Oenococcus oeni AWRIB318]
gi|399972499|gb|EJO06699.1| GTPase [Oenococcus oeni AWRIB553]
gi|399975335|gb|EJO09392.1| GTPase [Oenococcus oeni AWRIB568]
gi|399977572|gb|EJO11552.1| GTPase [Oenococcus oeni AWRIB576]
gi|410498235|gb|EKP89691.1| GTPase [Oenococcus oeni AWRIB202]
gi|410499123|gb|EKP90560.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 437
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 180/325 (55%), Gaps = 42/325 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + A T+FG G VE +K +N E++ + N L+ Q RNLE+
Sbjct: 47 VVDVLTQKYDRPNAATYFGKGKVEELKELVNAKEAR----LVISNDDLTATQIRNLEKMI 102
Query: 173 GKPV--LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V +DR GLI++IF A A TK AKLQ LA Y+ RL T A
Sbjct: 103 ASDVRVVDRTGLILDIFAARAKTKIAKLQVRLAQKQYQLPRL-------------HTSLA 149
Query: 231 EVVSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
+ + G+GG F S G+GET+L+L RR I E+ S + ++++ + + VQR R
Sbjct: 150 NELDQQA-GAGGASFTSRGSGETKLELNRRTIEEQISQIKTELKSLLSSSTVQRKRR--- 205
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSAL--------SDSD---LFSDARLFATLDPRLKS 338
D GL VA+VGYTNAGKST ++ + +DS+ +F LFATLD ++S
Sbjct: 206 ---DNSGLKRVALVGYTNAGKSTWMNRIVERYSQIGNDSEEKKVFEKDMLFATLDSTVRS 262
Query: 339 VVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTV 397
+ LP+ + LLSDTVGFIS+LP LV +F +TLEE +DLLV ++D + P+ + TT
Sbjct: 263 IRLPNKRQFLLSDTVGFISNLPHNLVASFQSTLEEASNSDLLVQIVDVSDPHYRDMLTTT 322
Query: 398 LQVLQQVGVSEEKLKNMIEVWNKID 422
+ L+Q+G + M+ ++NK D
Sbjct: 323 SKTLRQIGAEQIP---MVTIFNKAD 344
>gi|333984514|ref|YP_004513724.1| GTP-binding protein HflX [Methylomonas methanica MC09]
gi|333808555|gb|AEG01225.1| GTP-binding proten HflX [Methylomonas methanica MC09]
Length = 421
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 180/311 (57%), Gaps = 35/311 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G ++ IK + S+ + D + VN LS Q+RNLE+A V+DR GLI++IF
Sbjct: 55 FVGKGKLDEIKTVV----SEQQADIVIVNHPLSPSQERNLEKALEVRVVDRNGLILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 111 QRAQTFEGKLQVELAQLKHLSTRLIR----------GWTHLE-------RQKGGIG-LRG 152
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R + ++E+V++ R R+ R++ + TV++VGYTNA
Sbjct: 153 PGETQLETDRRLLAVRIKQIQQRLEKVQKQRHQGRSKRKKAE------IPTVSLVGYTNA 206
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ +D+++ +LFATLDP L+ + + SG+V+L+DTVGFI LP +LV AF
Sbjct: 207 GKSTLFNTLTGADIYAADQLFATLDPTLRHLAIGDSGEVVLADTVGFIRHLPHELVAAFR 266
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+E EADLL+HV+D A E+ T+ QV Q + E + V+NKID D
Sbjct: 267 STLQEASEADLLLHVIDAHA---EDRDDTIFQVNQVLDDIEAGKIPQLRVFNKIDLLD-- 321
Query: 428 MGDVEYIDGDD 438
G + +ID DD
Sbjct: 322 -GVLPHIDYDD 331
>gi|421190471|ref|ZP_15647772.1| GTPase [Oenococcus oeni AWRIB422]
gi|421192410|ref|ZP_15649676.1| GTPase [Oenococcus oeni AWRIB548]
gi|399969527|gb|EJO03861.1| GTPase [Oenococcus oeni AWRIB548]
gi|399969906|gb|EJO04220.1| GTPase [Oenococcus oeni AWRIB422]
Length = 437
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 180/325 (55%), Gaps = 42/325 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + A T+FG G VE +K +N E++ + N L+ Q RNLE+
Sbjct: 47 VVDVLTQKYDRPNAATYFGKGKVEELKELVNAKEAR----LVISNDDLTATQIRNLEKMI 102
Query: 173 GKPV--LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V +DR GLI++IF A A TK AKLQ LA Y+ RL T A
Sbjct: 103 ASDVRVVDRTGLILDIFAARAKTKIAKLQVRLAQKQYQLPRL-------------HTSLA 149
Query: 231 EVVSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
+ + G+GG F S G+GET+L+L RR I E+ S + ++++ + + VQR R
Sbjct: 150 NELDQQA-GAGGASFTSRGSGETKLELNRRTIEEQISQIKTELKSLLSSSTVQRKRR--- 205
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSAL--------SDSD---LFSDARLFATLDPRLKS 338
D GL VA+VGYTNAGKST ++ + +DS+ +F LFATLD ++S
Sbjct: 206 ---DNSGLKRVALVGYTNAGKSTWMNRILERYSQIGNDSEEKKVFEKDMLFATLDSTVRS 262
Query: 339 VVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTV 397
+ LP+ + LLSDTVGFIS+LP LV +F +TLEE +DLLV ++D + P+ + TT
Sbjct: 263 IRLPNKRQFLLSDTVGFISNLPHNLVASFQSTLEEASNSDLLVQIVDVSDPHYRDMLTTT 322
Query: 398 LQVLQQVGVSEEKLKNMIEVWNKID 422
+ L+Q+G + M+ ++NK D
Sbjct: 323 SKTLRQIGAEQIP---MVTIFNKAD 344
>gi|313206776|ref|YP_004045953.1| GTP-binding protein hflx [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|383486083|ref|YP_005394995.1| GTP-binding protein hflx [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|386321242|ref|YP_006017404.1| protein HflX [Riemerella anatipestifer RA-GD]
gi|407451376|ref|YP_006723100.1| GTPase [Riemerella anatipestifer RA-CH-1]
gi|416109355|ref|ZP_11591314.1| GTP-binding protein HflX [Riemerella anatipestifer RA-YM]
gi|442314009|ref|YP_007355312.1| GTPase [Riemerella anatipestifer RA-CH-2]
gi|312446092|gb|ADQ82447.1| GTP-binding protein HflX [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|315023848|gb|EFT36850.1| GTP-binding protein HflX [Riemerella anatipestifer RA-YM]
gi|325335785|gb|ADZ12059.1| HflX [Riemerella anatipestifer RA-GD]
gi|380460768|gb|AFD56452.1| GTP-binding protein hflx [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|403312361|gb|AFR35202.1| GTPase [Riemerella anatipestifer RA-CH-1]
gi|441482932|gb|AGC39618.1| GTPase [Riemerella anatipestifer RA-CH-2]
Length = 406
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 166/295 (56%), Gaps = 33/295 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E I+ + + E+ + + LS Q +NLER +LDR LI++IF
Sbjct: 60 TFVGKGKMEEIRDFVK----ENEVGTVIFDDELSPSQLKNLEREMEVKILDRTNLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL R+ + R GG G +
Sbjct: 116 AQRAQTSYARTQVELAQYEYLLPRLTRMW-----------------THLERQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR I +R S L +++ + + A QR R + + VA+VGYTN
Sbjct: 158 GPGETEIETDRRIIRDRISLLKEKLKTIDKQMATQRNNRGK--------MVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNVISKSEVFAENKLFATLDTTVRKVVIGNLPFLLTDTVGFIRKLPTQLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV EADLLVHV+D + + E+H +V Q+LQ++ K I ++NKID
Sbjct: 270 STLDEVREADLLVHVVDISHESFEDHIESVNQILQEIDAHR---KPAIMIFNKID 321
>gi|408369364|ref|ZP_11167145.1| GTP-binding protein HflX [Galbibacter sp. ck-I2-15]
gi|407745110|gb|EKF56676.1| GTP-binding protein HflX [Galbibacter sp. ck-I2-15]
Length = 403
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 168/298 (56%), Gaps = 33/298 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G +E I ++ + ++ + + L+ QQ+N+ER VLDR LI++IF
Sbjct: 60 TFIGSGKMEEILTFVD----ENDIGTVIFDDELTPAQQKNIERVLKVKVLDRTSLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYARTQVELAQYQYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R + L ++ ++ + QR R L VA++GYTN
Sbjct: 158 GPGETEIETDRRIVRDRIALLKKKLTKIDKQMETQRGNRG--------ALVRVALIGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S SD+F++ +LFATLD ++ VV+ + LL+DTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNVISKSDVFAENKLFATLDTTVRKVVIGNLPFLLTDTVGFIRKLPTQLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
+TL+EV EADLL+HV+D + P E+H +V Q+L ++ ++ K I V+NKID ++
Sbjct: 270 STLDEVREADLLLHVVDISHPTFEDHINSVNQILDEIKSAD---KPTIMVFNKIDNYE 324
>gi|421187489|ref|ZP_15644848.1| GTPase [Oenococcus oeni AWRIB419]
gi|399968697|gb|EJO03129.1| GTPase [Oenococcus oeni AWRIB419]
Length = 437
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 180/325 (55%), Gaps = 42/325 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K + A T+FG G VE +K +N E++ + N L+ Q RNLE+
Sbjct: 47 VVDVLTQKYDRPNAATYFGKGKVEELKELVNAKEAR----LVISNDDLTATQIRNLEKMI 102
Query: 173 GKPV--LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V +DR GLI++IF A A TK AKLQ LA Y+ RL T A
Sbjct: 103 ASDVRVVDRTGLILDIFAARAKTKIAKLQVRLAQKQYQLPRL-------------HTSLA 149
Query: 231 EVVSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
+ + G+GG F S G+GET+L+L RR I E+ S + ++++ + + VQR R
Sbjct: 150 NELDQQA-GAGGASFTSRGSGETKLELNRRTIEEQISQIKTELKSLLSSSTVQRKRR--- 205
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSAL--------SDSD---LFSDARLFATLDPRLKS 338
D GL VA+VGYTNAGKST ++ + +DS+ +F LFATLD ++S
Sbjct: 206 ---DNSGLKRVALVGYTNAGKSTWMNRIVERYSQIGNDSEEKKVFEKDMLFATLDSMVRS 262
Query: 339 VVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTV 397
+ LP+ + LLSDTVGFIS+LP LV +F +TLEE +DLLV ++D + P+ + TT
Sbjct: 263 IRLPNKRQFLLSDTVGFISNLPHNLVASFQSTLEEASNSDLLVQIVDVSDPHYRDMLTTT 322
Query: 398 LQVLQQVGVSEEKLKNMIEVWNKID 422
+ L+Q+G + M+ ++NK D
Sbjct: 323 SKTLRQIGAEQIP---MVTIFNKAD 344
>gi|332880831|ref|ZP_08448502.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357046987|ref|ZP_09108601.1| GTP-binding protein HflX [Paraprevotella clara YIT 11840]
gi|332681214|gb|EGJ54140.1| GTP-binding protein HflX [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355530082|gb|EHG99500.1| GTP-binding protein HflX [Paraprevotella clara YIT 11840]
Length = 419
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 179/335 (53%), Gaps = 21/335 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
E + + Y D F V V+ + K + T+ G G +E I+ +I E
Sbjct: 26 ERKTNEYLDELEFLAHTAGAVTVKRFTQKVNGPNSVTYVGKGKLEEIRAYIEAEEEAERE 85
Query: 152 DAIFV-NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E+ +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 IGMVIFDDELSAKQLRNIEKELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYRYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKQ 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ R + QR+ R R + VA+VGYTN GKSTL++ LS SD+F++ +LFA
Sbjct: 197 RLAEIDRQKTTQRSNRGR--------MIRVALVGYTNVGKSTLMNLLSKSDVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LLSDTVGFI LP LVD+F +TL+EV EADLL+HV+D P+
Sbjct: 249 TLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVVDIAHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
E+ V + L +G S+ K + V+NKID +D
Sbjct: 309 EDQIQVVEKTLGDLGCSD---KPCMIVFNKIDAYD 340
>gi|299768754|ref|YP_003730780.1| GTP-binding proten HflX [Acinetobacter oleivorans DR1]
gi|298698842|gb|ADI89407.1| GTP-binding proten HflX [Acinetobacter oleivorans DR1]
Length = 447
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 182/318 (57%), Gaps = 36/318 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLER 170
++++ ++ K F G G VE I AE EL+A + + LS Q+RNLER
Sbjct: 42 ILEHIKVQRNKPNPKFFIGSGKVEEI------AERVQELEASLVIFDHALSPAQERNLER 95
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
V+DR GLI++IF A T E KLQ ELA L + +RL+R G + +
Sbjct: 96 ILKCRVIDRTGLILDIFALRARTHEGKLQVELAQLKHLSTRLIR----------GWSADF 145
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
E + GG G + G GET+L+ RR I R + L ++E+V +TR RAAR++
Sbjct: 146 E------QQKGGIG-LRGPGETQLETDRRLIRVRIAQLKDKLEKVHQTRIQGRAARQK-- 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLS 349
+ TV++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + G V+L+
Sbjct: 197 ----AAIPTVSLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLA 252
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGF+ +L L+++F ATLEE +EA LL+HV+D + ++ + V VL+++G
Sbjct: 253 DTVGFVRNLQHDLIESFKATLEETLEATLLLHVIDSNSHDMLDQIEAVEGVLKEIGADAP 312
Query: 410 KLKNMIEVWNKIDYHDEE 427
L+ V+NKID EE
Sbjct: 313 VLR----VYNKIDLSGEE 326
>gi|372209094|ref|ZP_09496896.1| GTP-binding protein HflX [Flavobacteriaceae bacterium S85]
Length = 407
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/361 (33%), Positives = 191/361 (52%), Gaps = 45/361 (12%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K K TF G G +E +K +I+ + + + LS Q RN+ER +LDR
Sbjct: 52 KLDKPNPKTFIGAGKLEDVKAYIDT----HTIGTVIFDDELSPAQLRNIERVLDTKILDR 107
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI++IF A T A+ Q LA Y RL ++ + +
Sbjct: 108 TTLILDIFAQRAETSYARTQVALAQCQYLLPRLTKLW-----------------THLDKQ 150
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG G + G GETE++ RR + ++ + L ++ + + AVQR R + +
Sbjct: 151 KGGIG-MRGPGETEIETDRRIVRDQIALLKKKLATIDKQMAVQRKNRGQ--------MVR 201
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLP 359
VA+VGYTN GKSTL++ +S S++F++ +LFATLD ++ VV+ + L++DTVGFI LP
Sbjct: 202 VALVGYTNVGKSTLMNLISKSEVFAENKLFATLDTTVRKVVIKNIPFLMTDTVGFIRKLP 261
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
QLV++F +TL+EV EADLL+HV+D + P E+H T+V +L+++ E K + V+N
Sbjct: 262 TQLVESFKSTLDEVREADLLLHVVDISHPTFEDHITSVNGILKEI---ESANKPTLMVFN 318
Query: 420 KIDYHDEEMGDVEYIDGDDI------SNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDG 473
KID + + ID DD+ +++ E K T +D +C+ D DN +
Sbjct: 319 KIDNYKHQT-----IDEDDLITERTEKHYTLDELKRTWMSRMDEDCV-FISAIDKDNIEE 372
Query: 474 F 474
F
Sbjct: 373 F 373
>gi|408673907|ref|YP_006873655.1| GTP-binding proten HflX [Emticicia oligotrophica DSM 17448]
gi|387855531|gb|AFK03628.1| GTP-binding proten HflX [Emticicia oligotrophica DSM 17448]
Length = 416
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 192/366 (52%), Gaps = 39/366 (10%)
Query: 71 LKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDK-ELPPHV--VVQNPSLKSGKARAD 127
LK P F AK E+ L + ++++ ++ D+ E V+ R D
Sbjct: 2 LKSPIFSTAKQQESAILVGLITQKQNAEQTKEYLDELEFLATTAGVITKRVFTQRLERPD 61
Query: 128 --TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGK-PVLDRVGLII 184
TF G G +E IK + + +D+I + L+ Q RNLE + +LDR LI+
Sbjct: 62 SRTFVGKGKLEEIKVWL----IENPVDSIIFDDDLTAPQVRNLEMMFQDIKILDRSLLIL 117
Query: 185 EIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRG 244
IF+ A T +AK Q ELA Y RL R+ + R GG G
Sbjct: 118 NIFSQRAQTDQAKRQVELAQYQYLLPRLTRMW-----------------THLSRQKGGIG 160
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GE EL+ +R + +R + L ++E++ + +R R R L VA+VG
Sbjct: 161 -MRGPGEKELETDKRIVKDRIAFLKDKLEKIDKQSFTRRKERSR--------LVRVALVG 211
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVD 364
YTN GKSTL+ L+ +++F++ +LFAT+D ++ VVL + LL+DTVGFI LP QL++
Sbjct: 212 YTNVGKSTLMRRLAKTEVFAENKLFATIDSTVRKVVLGNIPFLLTDTVGFIRKLPTQLIE 271
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+F +TL+E+ EAD+L+HV+D + P+ EE V L ++G SE K+MI V+NK+D
Sbjct: 272 SFKSTLDEIREADILIHVVDISHPSFEEQIEVVNVTLAEIGASE---KSMILVFNKLDLF 328
Query: 425 DEEMGD 430
E D
Sbjct: 329 KPESED 334
>gi|189502569|ref|YP_001958286.1| hypothetical protein Aasi_1232 [Candidatus Amoebophilus asiaticus
5a2]
gi|189498010|gb|ACE06557.1| hypothetical protein Aasi_1232 [Candidatus Amoebophilus asiaticus
5a2]
Length = 395
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/322 (36%), Positives = 171/322 (53%), Gaps = 35/322 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
+ + T G G +E IK I E +D + + L+ Q RNLER +P+LDR +
Sbjct: 57 RPQTGTLIGKGKLEEIKTFIQTEE----VDKVIFDEELTPSQTRNLERILERPILDRNSI 112
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+ IF A T++AK+Q ELA Y RL ++ S R GG
Sbjct: 113 ILAIFAMRAKTRQAKIQVELAQYQYLLPRLTKMW-----------------SHLSRQKGG 155
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
+ G GE EL+ RR + ++ S L ++E + + QR R+ L VA+
Sbjct: 156 FSGMRGPGEKELETDRRIVQDKISLLRKKLESINKQSITQRKTRQ--------DLVRVAL 207
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQL 362
VGYTN GKSTL+ LS SD + + +LFAT+ ++ VV+ LL+DTVGFI LP L
Sbjct: 208 VGYTNVGKSTLMHLLSKSDAYVEDKLFATITSTVRRVVINHIPFLLTDTVGFIRKLPHTL 267
Query: 363 VDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+++F +TL+E+ EAD+L+HV+D + P EEH V Q L ++G E + ++ V+NK+D
Sbjct: 268 IESFKSTLDEIREADILLHVVDASHPACEEHIQVVQQTLHEIGA--EHIPAIL-VFNKMD 324
Query: 423 YHDEE---MGDVEYIDGDDISN 441
+EE G I + ISN
Sbjct: 325 QLEEENSANGQQHTITMEAISN 346
>gi|449116972|ref|ZP_21753416.1| GTP-binding protein HflX [Treponema denticola H-22]
gi|448952236|gb|EMB33040.1| GTP-binding protein HflX [Treponema denticola H-22]
Length = 391
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 165/299 (55%), Gaps = 30/299 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E I I E +G D + N+ +S QRNLE A V+DR +II+IF
Sbjct: 75 TLVGSGQLEKIAQAI---EEEGA-DLVVFNSAVSPRIQRNLEAALNTCVIDRSEVIIQIF 130
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T+EA LQAELA L Y RL R R T + RG G RG
Sbjct: 131 ADRAQTREAVLQAELARLEYSMPRLTR------RWT-------SLAQQRGGAKGTRGASR 177
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGE +L+L RRR+ + L ++E VR R+ QR + R G G A+VGYTN
Sbjct: 178 GAGEKKLELDRRRLKTEIAKLKKEVERVRLQRSEQR--KTRLNGDKKIG----AIVGYTN 231
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG----KVLLSDTVGFISDLPLQLV 363
AGKS+L+ LS +++F++ +LFATLD + V L +G ++LL+DTVGF+S+LP QL+
Sbjct: 232 AGKSSLLKKLSGAEVFTEDKLFATLDAETRKVFLQTGEKNIQILLTDTVGFVSNLPHQLI 291
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
DAF +TLEE AD L+ V D P + E +VL ++ S+ K I NK+D
Sbjct: 292 DAFRSTLEEAALADFLIIVCDAAHPAMPECLEVTKKVLDELSCSD---KPSIIAINKMD 347
>gi|406938225|gb|EKD71505.1| hypothetical protein ACD_46C00177G0003 [uncultured bacterium]
Length = 416
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 168/295 (56%), Gaps = 32/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E I+ + ++K + N +L+ Q+RNLER VLDR GLI++IF
Sbjct: 57 FVGSGKAEEIRDAVITHQAK----LVIFNHVLTPAQERNLERLISCRVLDRTGLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + +RL+R G + RG G G RG
Sbjct: 113 QRARSFEGKLQVELALLKHLSTRLIR-------------GWTHLERQRG-GIGLRG---- 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I ++ + +++ ++RR R R ARR+ + TVA+VGYTNA
Sbjct: 155 PGETQLEVDRRLIRQKIKLISARLAKIRRQREQSRRARRKAI------IPTVALVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ + +++ +LFATLDP L+ V LP G V+ +DTVGFI LP L++AF
Sbjct: 209 GKSTLFNRLTGASIYAANQLFATLDPTLRRVELPEIGPVIFADTVGFIRHLPHDLIEAFQ 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEEV EADLL+HV+D + ++ V QVL + + + I V NKID
Sbjct: 269 ATLEEVTEADLLLHVIDAHQDDKDQQMEQVNQVLDTINAQDVPI---ILVHNKID 320
>gi|255280317|ref|ZP_05344872.1| GTP-binding protein HflX [Bryantella formatexigens DSM 14469]
gi|255269408|gb|EET62613.1| GTP-binding protein HflX [Marvinbryantia formatexigens DSM 14469]
Length = 415
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 165/296 (55%), Gaps = 32/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E +K E+ DA+ + LS Q NL++ VLDR +I++IF
Sbjct: 59 TYIGRGKIEEVKQMAYALEA----DAVICDDELSPAQLHNLQQELDMKVLDRTLIILDIF 114
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A A T E K+Q ELA L Y+++RLV +R RL G
Sbjct: 115 AARASTSEGKIQVELAQLKYRQARLVGLRNSLSRLGGGIGTRG----------------- 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GE +L++ RR I +R + L ++ EV+R R V R+ R R A+VGYTN
Sbjct: 158 -PGEKKLEMDRRLIKDRIAQLNRELSEVKRHREVTRSRRMRQQTP------VAAIVGYTN 210
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
AGKSTL++ L+ S + + +LFATLDP + + LPSG+ +LL+DTVGFI LP L+DAF
Sbjct: 211 AGKSTLLNTLTGSQVMEEDKLFATLDPTTRVLELPSGQEMLLTDTVGFIRKLPHHLIDAF 270
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TLEE AD+++HV+D + P E+ V + L+ +GVS K +I ++NK D
Sbjct: 271 RSTLEEAKYADIILHVVDASNPQAEQQMAVVYETLENLGVSG---KTVITLFNKQD 323
>gi|325286475|ref|YP_004262265.1| GTP-binding proten HflX [Cellulophaga lytica DSM 7489]
gi|324321929|gb|ADY29394.1| GTP-binding proten HflX [Cellulophaga lytica DSM 7489]
Length = 403
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 177/320 (55%), Gaps = 38/320 (11%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K K T+ G G ++ + ++ + ++ ++ + L+ QQRN+ER ++DR
Sbjct: 52 KIDKPNPKTYIGSGKMDEVAQYV----EEHKIGSVIFDDELTPGQQRNIERHLKCKIVDR 107
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI++IF A T ++ Q ELA Y RL G T E R
Sbjct: 108 TTLILDIFAQRAQTSYSRTQVELAQYEYLLPRLT------GLWTHLE-----------RQ 150
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
GG G + G GETE++ RR + +R + L ++ ++ R QR R L
Sbjct: 151 KGGIG-MRGPGETEIETDRRIVRDRITLLKKKLSKIDRQMETQRGNRG--------ALVR 201
Query: 300 VAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLP 359
VA+VGYTN GKSTL++ +S SD+F++ +LFATLD ++ VVL + LLSDTVGFI LP
Sbjct: 202 VALVGYTNVGKSTLMNVVSKSDVFAEDKLFATLDTTVRKVVLGNLPFLLSDTVGFIRKLP 261
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
QLV++F +TL+EV EADLL+H++D + PN E+H +V ++L+++ ++K I V+N
Sbjct: 262 TQLVESFKSTLDEVREADLLLHIVDISHPNFEDHIASVHKILEEIKADDKK---TIIVFN 318
Query: 420 KIDYHDEEMGDVEYIDGDDI 439
KID E ID DD+
Sbjct: 319 KIDQFTHET-----IDDDDL 333
>gi|359786588|ref|ZP_09289708.1| GTP-binding protein HflX [Halomonas sp. GFAJ-1]
gi|359296119|gb|EHK60373.1| GTP-binding protein HflX [Halomonas sp. GFAJ-1]
Length = 436
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 176/310 (56%), Gaps = 34/310 (10%)
Query: 119 LKSGKARAD--TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPV 176
L + + R D TF G G +E ++ + E+ + + N L Q+RNLER V
Sbjct: 46 LTASRQRPDSRTFIGTGKLEELRAMLAAHEA----ELVIFNHTLKPSQERNLERELKCRV 101
Query: 177 LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSAR 236
LDR GLI++IF A T E KLQ ELA L Y +RL+R G T
Sbjct: 102 LDRTGLILDIFAQRARTHEGKLQVELAQLEYMSTRLIR----------GWTHLE------ 145
Query: 237 GRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRG 296
R GG G + G GET+L+ RR + R + ++++VR R R AR R
Sbjct: 146 -RQKGGIG-LRGPGETQLETDRRLLRVRIKSIHKRLDKVRSQREQNRRARSRAE------ 197
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFI 355
+ +V++VGYTNAGKSTL +AL+++++++ +LFATLDP L+ + + G V+L+DTVGFI
Sbjct: 198 IHSVSLVGYTNAGKSTLFNALTNAEVYAADQLFATLDPTLRRLEIEDVGPVVLADTVGFI 257
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI 415
LP +LV+AF ATL+E EA LLVHV+D P+ + + V +VL+++G ++
Sbjct: 258 RHLPHKLVEAFRATLQEAAEASLLVHVIDAADPDRDLNVEQVNRVLEEIGADSVP---VL 314
Query: 416 EVWNKIDYHD 425
+V NKID D
Sbjct: 315 KVMNKIDRLD 324
>gi|357406389|ref|YP_004918313.1| GTP-binding protein HflX [Methylomicrobium alcaliphilum 20Z]
gi|351719054|emb|CCE24728.1| GTP-binding protein HflX [Methylomicrobium alcaliphilum 20Z]
Length = 420
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 188/334 (56%), Gaps = 43/334 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E +K I S+ D + N LS Q+RNLE+A V+DR GLI++IF
Sbjct: 55 FIGTGKLEELKQAI----SEYSADIVLFNHPLSPSQERNLEKALEVRVVDRNGLILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 111 QRAQTFEGKLQVELAQLRHLSTRLIR----------GWTHLE-------RQKGGIG-LRG 152
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLA---TVAVVGY 305
GET+L+ RR + R + QI+ R + + A++RH G R A +V++VGY
Sbjct: 153 PGETQLETDRRLLGVR----IKQIQ-----RRLNKVAKQRHQGRSKRKKAEVPSVSLVGY 203
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + ++ +++++ +LFATLDP L+ VLP+ +++L+DTVGFI LP +LV
Sbjct: 204 TNAGKSTLFNTMTGAEIYAADQLFATLDPTLRQCVLPNNAEIVLADTVGFIRHLPHELVA 263
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF +TL+E EA+LL+HV+D A + +E V QVL+ + E + ++++NKID
Sbjct: 264 AFRSTLQEASEANLLLHVIDANAEDRDETIAQVNQVLEDIEADEIR---QLQIFNKIDL- 319
Query: 425 DEEMGDVE-YIDGDDISNFSRAEDKDTTSEPVDV 457
+ D+E +ID DD N R T +D+
Sbjct: 320 ---LPDIEPHIDRDDEGNVLRVWLSAETGAGIDL 350
>gi|326692195|ref|ZP_08229200.1| GTP-binding protein HflX [Leuconostoc argentinum KCTC 3773]
Length = 432
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 171/308 (55%), Gaps = 40/308 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A ++D I N LS Q RNLE+ VLDR GLI++IF
Sbjct: 59 TYFGKGKVE----ELAEAAKTYDVDMIVANDELSPSQIRNLEKLTNTTVLDRTGLILDIF 114
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ +LA L Y+ RL R + + + + G+GG GF S
Sbjct: 115 AQRAQTKEAKLQVQLARLQYQLPRL--------RTSMSVSLDQQT------GTGGAGFTS 160
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G+GET+L+ RRRI + H+ ++ E+ + + + A R + LA VA+VGYT
Sbjct: 161 RGSGETKLEESRRRITSQMVHIRQELAELSKGTSTRSAKRTTN------ELANVALVGYT 214
Query: 307 NAGKSTLVSAL-------SDSD----LFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGF 354
NAGKSTL++ L +D+D +F LFATL ++ + LP K LLSDTVGF
Sbjct: 215 NAGKSTLMNRLLARFGVGADTDDTKQVFEKDMLFATLTTTVRQLTLPDKKQFLLSDTVGF 274
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+S LP LV AF +TL+E ADLL+ ++D + + ++ T + L +VGV++ M
Sbjct: 275 VSKLPHNLVSAFKSTLQEAANADLLLQIVDVSDEHYKDMMATTEKTLAEVGVTDVP---M 331
Query: 415 IEVWNKID 422
I V+NK D
Sbjct: 332 ITVYNKAD 339
>gi|47214135|emb|CAG01393.1| unnamed protein product [Tetraodon nigroviridis]
Length = 510
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 198/372 (53%), Gaps = 52/372 (13%)
Query: 63 RLFLVQP------RLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQN 116
RL +V P R + T + L EA+ L N+L+ VV
Sbjct: 90 RLVIVHPDVKWGSRKQHLTTAELMLAEAVGLVNTLDNW-----------------TVVDT 132
Query: 117 PSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERAWGKP 175
L + FG G +++ I ++ G + A+FVN LS + +R LE AWG
Sbjct: 133 VVLSTKTPEKKRIFGKGNFQSLTEKIR--QTAG-ITAVFVNVEHLSPLSERELEEAWGVK 189
Query: 176 VLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSA 235
VLDR +++ IF +A TKEAKLQ LA + +SRL + E+ +
Sbjct: 190 VLDRYSVVLHIFRCNARTKEAKLQISLAEIPLLRSRL----------------KNEIANL 233
Query: 236 RGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGR 295
+G G +I G+GET L++Q+R + ER + + +E++RR R + RA R++ +
Sbjct: 234 DQQG-GRSKYIGGSGETLLEVQQRLLKEREMKIRTALEKLRRKRHLLRAQRKQ------Q 286
Query: 296 GLATVAVVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVG 353
V+V+GYTN+GK+TL+ +L+ DS L +LFATLD + + LP+ VL DT+G
Sbjct: 287 EFPMVSVLGYTNSGKTTLIKSLTGDSGLQPKNQLFATLDVTVHAGQLPNHMTVLYVDTIG 346
Query: 354 FISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN 413
F+S LP +L+D+F ATLE++ +DLL+HV D + P + VL VL+ + + + + +
Sbjct: 347 FLSQLPHRLIDSFSATLEDIKHSDLLLHVRDVSHPETLNQKANVLNVLKNLQIPDRLIGS 406
Query: 414 MIEVWNKIDYHD 425
MIEV NKID D
Sbjct: 407 MIEVHNKIDLVD 418
>gi|375255604|ref|YP_005014771.1| GTP-binding protein HflX [Tannerella forsythia ATCC 43037]
gi|363406147|gb|AEW19833.1| GTP-binding protein HflX [Tannerella forsythia ATCC 43037]
Length = 411
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 169/295 (57%), Gaps = 33/295 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G ++ IK ++ + E+ + + LS Q RN+E+A +LDR LI++IF
Sbjct: 62 TFVGSGKLQQIKEYV----IEHEIGIVVFDDELSAKQLRNIEKALQVRILDRTNLILDIF 117
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL R+ + R GG G +
Sbjct: 118 AKRAQTAHAKTQVELAQYRYMLPRLTRLW-----------------THLERQRGGVG-MR 159
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+ +R IL++ S L ++ E+ + ++ QR R + + VA+VGYTN
Sbjct: 160 GPGETQLETDKRIILDKISRLKRELAEIDKQKSSQRKNRGK--------MVRVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ LS S++F++ +LFATLD ++ V++ + LLSDTVGFI LP++LV++F
Sbjct: 212 VGKSTLMNLLSKSEVFAENKLFATLDTTVRKVIIENLPFLLSDTVGFIRKLPVELVESFK 271
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+EV EADLL+H++D + P EE V + L ++G K +I ++NK+D
Sbjct: 272 STLDEVREADLLLHMVDVSHPMFEEQIEVVDRTLAEIGCES---KPVIMIFNKVD 323
>gi|374599298|ref|ZP_09672300.1| GTP-binding protein HflX [Myroides odoratus DSM 2801]
gi|423324443|ref|ZP_17302284.1| GTP-binding protein HflX [Myroides odoratimimus CIP 103059]
gi|373910768|gb|EHQ42617.1| GTP-binding protein HflX [Myroides odoratus DSM 2801]
gi|404608383|gb|EKB07858.1| GTP-binding protein HflX [Myroides odoratimimus CIP 103059]
Length = 411
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 190/358 (53%), Gaps = 37/358 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S K + A TF G G +E IK +I + ++ + + LS QQ+N+ R VL
Sbjct: 50 SQKLDQPNAKTFLGTGKMEEIKSYI----VEHDIHTVIFDDELSPGQQKNITRILDCKVL 105
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR LI++IF A T A+ Q ELA Y RL G T E
Sbjct: 106 DRTNLILDIFAQRAQTSYARTQVELAQFQYLLPRL------SGMWTHLE----------- 148
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GETE++ RR + +R + L +++ + + A QR+ R +
Sbjct: 149 RQRGGIG-MRGPGETEIETDRRIVRDRITLLREKLKVIDKQMASQRSNRG--------AM 199
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISD 357
VA+VGYTN GKSTL++A+ S++F + +LFATLD ++ +V+ + LLSDTVGFI
Sbjct: 200 VRVALVGYTNVGKSTLMNAIGKSEVFVENKLFATLDTTVRKIVIGNLPFLLSDTVGFIRK 259
Query: 358 LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEV 417
LP QLV++F +TL+EV EADLL+HV+D + + E+H +V +L+ + + K I V
Sbjct: 260 LPTQLVESFKSTLDEVREADLLLHVVDISHHDFEDHIASVNDILKDIKSDD---KPTIMV 316
Query: 418 WNKID-YHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDADNNDGF 474
+NKID YH E + + + + ++S E K T V V DN A N + F
Sbjct: 317 FNKIDAYHPEVIAEDDLMTERTSRHYSIEEWKKTWMNKVGV---DNAIFISATNKENF 371
>gi|394988916|ref|ZP_10381751.1| GTP-binding proten HflX [Sulfuricella denitrificans skB26]
gi|393792295|dbj|GAB71390.1| GTP-binding proten HflX [Sulfuricella denitrificans skB26]
Length = 451
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 168/281 (59%), Gaps = 30/281 (10%)
Query: 147 SKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALM 206
S G++D +FV+ +S Q RNLE G V+DR +I+EIF+ HA ++ A+ Q E+A L
Sbjct: 94 SAGKIDVVFVDHEISPSQARNLEIEVGCKVMDRTMVILEIFHRHASSRAARAQVEIARLG 153
Query: 207 YKKSRL---VRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL ++ GP GR + G+GGRG AGE+ +L +R+I +
Sbjct: 154 YMAPRLREAAKLAGPQGR--------------QRSGTGGRG----AGESHTELDKRKIRD 195
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R + L +I + R QR+ R+ + +GLA VA+VGYTNAGKSTL+ AL+ S++
Sbjct: 196 RIAELQLEIAAMDVERKTQRSRRQ-----ERQGLANVALVGYTNAGKSTLMRALTGSEVL 250
Query: 324 SDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 382
+ +LFATLD ++++ S +VL+SDTVGFI +LP LV +F +TLEE ++A LL+HV
Sbjct: 251 VENKLFATLDTTVRALQPESRPRVLVSDTVGFIKNLPHGLVASFKSTLEEALDASLLLHV 310
Query: 383 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
+D + P E +VL ++G K I V+NKID+
Sbjct: 311 IDASDPGFERQLEVTDKVLAEIGA---KDVPRIRVFNKIDH 348
>gi|407459071|ref|YP_006737174.1| GTP-binding proten HflX [Chlamydia psittaci M56]
gi|405786165|gb|AFS24910.1| GTP-binding proten HflX [Chlamydia psittaci M56]
Length = 458
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 161/273 (58%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ A+ V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGALIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMVRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLPSG +VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T ++L+++GV K +I V NKID
Sbjct: 321 AFEHIETTQEILKELGVDYPK---IITVLNKID 350
>gi|421858529|ref|ZP_16290795.1| GTPase [Paenibacillus popilliae ATCC 14706]
gi|410831910|dbj|GAC41232.1| GTPase [Paenibacillus popilliae ATCC 14706]
Length = 399
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 125/320 (39%), Positives = 171/320 (53%), Gaps = 43/320 (13%)
Query: 112 VVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
VV QN + K + G G ++ + +N E+ + + N LS Q RNLE+
Sbjct: 18 VVTQNLN----KVNTSHYIGTGKLQEVTIMLNQHEA----NIVIFNDELSPSQLRNLEKD 69
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
V+DR LI++IF A TKEA+LQ E+A L Y RLV +R
Sbjct: 70 LDCKVVDRTLLILDIFGERAKTKEAQLQVEVAELQYMLPRLVGLR--------------- 114
Query: 232 VVSARGRGSGGRGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
+ GR SGG G + G GE +L+L RRRI ER + L ++E + R QR R++
Sbjct: 115 --ESLGRQSGGVGTKNKGTGEKKLELDRRRIEERITALNKELEALVAHRQTQRKRRKK-- 170
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPS 343
L V++VGYTNAGKST+++ L D +F LFATLD ++S+ L
Sbjct: 171 ----TELPVVSLVGYTNAGKSTVMNTLVEQFTDSKDKFVFEQDMLFATLDTSVRSIELED 226
Query: 344 GKV-LLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ 402
K LL+DTVGF+S LP LV AF +TLEEV EADLLVHV+D + P E+ + L+
Sbjct: 227 NKAFLLTDTVGFVSKLPHHLVKAFRSTLEEVKEADLLVHVVDFSNPEYEQQIRITNETLK 286
Query: 403 QVGVSEEKLKNMIEVWNKID 422
+G+ E MI +NKID
Sbjct: 287 AIGIEEIP---MIYAYNKID 303
>gi|333383615|ref|ZP_08475273.1| GTP-binding protein HflX [Dysgonomonas gadei ATCC BAA-286]
gi|332827554|gb|EGK00300.1| GTP-binding protein HflX [Dysgonomonas gadei ATCC BAA-286]
Length = 408
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/331 (37%), Positives = 181/331 (54%), Gaps = 32/331 (9%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EEQ + Y D F E + V+N + K + TF G G ++ IK ++ E+
Sbjct: 26 EEQVNEYLDELAFLAETAGIIPVKNFTQKLEHSNPVTFVGTGKLQEIKQYMED----NEI 81
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D + + LS Q RN+E+ +LDR LI++IF A T AK Q ELA Y R
Sbjct: 82 DLVIFDDELSPKQIRNIEKELQVKILDRTSLILDIFAMRAQTAYAKTQVELAQYQYLLPR 141
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L R+ + R GG + G GET+L+ RR IL + + L +
Sbjct: 142 LTRMW-----------------THLDRQRGGGVMMRGVGETQLETDRRIILNKIALLKEE 184
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
++ + + Q A++R++ G R VA+VGYTN GKSTL++ LS S++F++ +LFAT
Sbjct: 185 LKNIDK----QMASQRKNRGKMVR----VALVGYTNVGKSTLMNLLSKSEVFAENKLFAT 236
Query: 332 LDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLE 391
LD ++ V++ + LLSDTVGFI LP LV++F +TL+EV EADLLVHV+D + PN E
Sbjct: 237 LDTTVRKVIIDNLPFLLSDTVGFIRKLPTHLVESFKSTLDEVREADLLVHVVDISHPNFE 296
Query: 392 EHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
E V + L ++ E K I V+NK+D
Sbjct: 297 EQIEVVNKTLLEIDKEE---KPTILVFNKVD 324
>gi|423228945|ref|ZP_17215351.1| GTP-binding protein HflX [Bacteroides dorei CL02T00C15]
gi|423247759|ref|ZP_17228807.1| GTP-binding protein HflX [Bacteroides dorei CL02T12C06]
gi|392631301|gb|EIY25276.1| GTP-binding protein HflX [Bacteroides dorei CL02T12C06]
gi|392635181|gb|EIY29086.1| GTP-binding protein HflX [Bacteroides dorei CL02T00C15]
Length = 417
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 182/334 (54%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + Y D F E VV+ + K A + T+ G G +E IK +I+ E ++ E
Sbjct: 26 ERKTKEYLDELEFLAETAGATVVKRFTQKLPAANSVTYVGKGKLEEIKEYIHQEEENERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q RN+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQIRNIEAELKVKILDRTLLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ E + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRL---------WTHLERQGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTLMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+
Sbjct: 249 TLDTTVRKVIIENLPFLLTDTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE + V + + + E K + V+NK+D +
Sbjct: 309 EEQISVVDKTIADL---EAGGKPTMIVFNKVDAY 339
>gi|282860167|ref|ZP_06269242.1| GTP-binding protein HflX [Prevotella bivia JCVIHMP010]
gi|424900627|ref|ZP_18324169.1| GTP-binding protein HflX [Prevotella bivia DSM 20514]
gi|282587056|gb|EFB92286.1| GTP-binding protein HflX [Prevotella bivia JCVIHMP010]
gi|388592827|gb|EIM33066.1| GTP-binding protein HflX [Prevotella bivia DSM 20514]
Length = 416
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 182/341 (53%), Gaps = 21/341 (6%)
Query: 85 LCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHING 144
L N E + Y D F + V V+ + + A T+ G G +E I+ +I
Sbjct: 19 LITQNQDEAKTKEYLDELEFLADTAGAVTVKRFTQRVNGPSAVTYVGKGKLEEIRDYIKQ 78
Query: 145 AESKGE-LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
E + + + + + LS Q RN+E+ +LDR LI++IF A T AK Q ELA
Sbjct: 79 KEDEEDPVGMVIFDDELSAKQMRNIEQMLAVKILDRTSLILDIFAMRAQTANAKTQVELA 138
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL R+ E + + G G + G GET+L++ RR IL
Sbjct: 139 QYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILN 189
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R S L ++ E+ + ++ QR R R + VA+VGYTN GKST ++ L+ S++F
Sbjct: 190 RMSLLKERLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTTMNLLAKSEVF 241
Query: 324 SDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVL 383
++ +LFATLD ++ VV+ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+
Sbjct: 242 AENKLFATLDTTVRKVVVDNLPFLLADTVGFIRKLPTDLVDSFKSTLDEVREADLLLHVV 301
Query: 384 DCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
D + P+ EE V + L +G ++ K + ++NKID +
Sbjct: 302 DISHPDFEEQIEVVNKTLADLGCAD---KPSMLIFNKIDNY 339
>gi|42528250|ref|NP_973348.1| GTP-binding protein HflX, truncation, partial [Treponema denticola
ATCC 35405]
gi|422340989|ref|ZP_16421930.1| GTP-binding protein HflX [Treponema denticola F0402]
gi|449110789|ref|ZP_21747389.1| GTP-binding protein HflX [Treponema denticola ATCC 33521]
gi|449114398|ref|ZP_21750876.1| GTP-binding protein HflX [Treponema denticola ATCC 35404]
gi|81831303|sp|Q73J26.1|HFLX_TREDE RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|41819520|gb|AAS13267.1| GTP-binding protein HflX, truncation [Treponema denticola ATCC
35405]
gi|325474560|gb|EGC77746.1| GTP-binding protein HflX [Treponema denticola F0402]
gi|448956550|gb|EMB37310.1| GTP-binding protein HflX [Treponema denticola ATCC 35404]
gi|448960163|gb|EMB40880.1| GTP-binding protein HflX [Treponema denticola ATCC 33521]
Length = 391
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 165/299 (55%), Gaps = 30/299 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E I I E +G D + N+ +S QRNLE A V+DR +II+IF
Sbjct: 75 TLVGSGQLEKIAQAI---EEEGA-DLVVFNSAVSPRIQRNLEAALNTCVIDRSEVIIQIF 130
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T+EA LQAELA L Y RL R R T + RG G RG
Sbjct: 131 ADRAQTREAVLQAELARLEYSMPRLTR------RWT-------SLAQQRGGAKGTRGASR 177
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGE +L+L RRR+ + L ++E VR R+ QR + R G G A+VGYTN
Sbjct: 178 GAGEKKLELDRRRLKTEITKLKKEVERVRLQRSEQR--KTRLNGDKKIG----AIVGYTN 231
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG----KVLLSDTVGFISDLPLQLV 363
AGKS+L+ LS +++F++ +LFATLD + V L +G ++LL+DTVGF+S+LP QL+
Sbjct: 232 AGKSSLLKKLSGAEVFTEDKLFATLDAETRKVFLQTGEKNIQILLTDTVGFVSNLPHQLI 291
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
DAF +TLEE AD L+ V D P + E +VL ++ S+ K I NK+D
Sbjct: 292 DAFRSTLEEAALADFLIIVCDAAHPAMPECLEVTKKVLDELSCSD---KPSIIAINKMD 347
>gi|365902422|ref|ZP_09440245.1| GTPase [Lactobacillus malefermentans KCTC 3548]
Length = 423
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 199/385 (51%), Gaps = 45/385 (11%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T+FG G VE +K + E++ + N LS Q RNLE V+DR GLI++
Sbjct: 52 AGTYFGTGKVEELKDIV----IDDEVEMVIANDELSPSQIRNLEGVINVAVIDRTGLILQ 107
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A ++EAKLQ +LA L Y+ RL T ++ + + S G GF
Sbjct: 108 IFADRAQSREAKLQVQLAKLQYQLPRL-------------HTSASQRLDQQTGTSSGGGF 154
Query: 246 IS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ GAGE++++L RR I + +H+ +++E+ ++ +R R R G L +A+VG
Sbjct: 155 TNRGAGESQIELNRRVIERQINHVRQELKEISKSEETKRQQRERQG------LPMIALVG 208
Query: 305 YTNAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFIS 356
YTNAGKST+++AL + +F LFATLD ++ + K+LLSDTVGF++
Sbjct: 209 YTNAGKSTIMNALVRQFGTSEEKQVFEKNMLFATLDTSVRQLTFGDQKKLLLSDTVGFVA 268
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP L++AF +TL E ADLL+ V+D PN + T ++ L+ +GV MI
Sbjct: 269 HLPTHLIEAFKSTLYEAANADLLIQVVDAADPNRDSMMATTMKTLEDIGVPNLP---MIV 325
Query: 417 VWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDV---ECIDNYGGDDADNNDG 473
+NK D D E G++++ +R D + + +D+ + NY AD
Sbjct: 326 AYNKADLTDVSFPSRE---GENLTMSAR--DDASIALLIDMIREKVFKNYV--TADFLIP 378
Query: 474 FVSEDLGESMNKNHNDYSDGWLLSG 498
F + D+ N+N N S ++ G
Sbjct: 379 FANGDVVSYFNENANVLSTEYVADG 403
>gi|373106600|ref|ZP_09520902.1| GTP-binding protein HflX [Stomatobaculum longum]
gi|371652294|gb|EHO17712.1| GTP-binding protein HflX [Stomatobaculum longum]
Length = 424
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 168/296 (56%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE ++ + E+ DA+ + LS Q +NL A G V+DR +I++IF
Sbjct: 60 TYFGKGKVEELRELLLSLEA----DAVAADDELSPAQMKNLSEALGVKVMDRTMIILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
HA T E KLQ ELA L Y ++ L+ + RL G
Sbjct: 116 AQHAVTAEGKLQVELAQLHYTQAHLLGMHSSLSRLGGGVGTRGPG--------------- 160
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
E +L+L RR I R S L ++ E++R R V RA R + G VA+VGYTN
Sbjct: 161 ---EQKLELDRRAIRARISFLREKLGELKRHREVSRAQREKSGSY------IVALVGYTN 211
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
AGKSTL++ L+D+ + ++ +LFATLDP + + LP G+ VL++DTVGFI LP QL++AF
Sbjct: 212 AGKSTLLNRLTDAGILAENKLFATLDPTTRKLSLPGGEEVLVTDTVGFIRKLPHQLIEAF 271
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
H+TLEE ADL++HV+D ++P + V + L+++ E+ ++I V+NK D
Sbjct: 272 HSTLEEARYADLILHVVDASSPEADTQMAVVYETLRELKALED--HSIIAVYNKTD 325
>gi|238022265|ref|ZP_04602691.1| hypothetical protein GCWU000324_02172 [Kingella oralis ATCC 51147]
gi|237866879|gb|EEP67921.1| hypothetical protein GCWU000324_02172 [Kingella oralis ATCC 51147]
Length = 377
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 172/311 (55%), Gaps = 32/311 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + + K K F G G E + + + ++ + N LS Q+RNLER
Sbjct: 55 LVCSETSKRDKPHTALFVGTGKAEELADLVK----QHDIQLVIFNHELSPTQERNLERTL 110
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDRVGLI+ IF A ++E KLQ ELA L + SRLVR G +
Sbjct: 111 QCRVLDRVGLILAIFAQRAQSQEGKLQVELAQLTHLSSRLVR-------------GYGHL 157
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
S +G G G + G GET+L+ RR I + + L Q+ V++ R +R AR GS
Sbjct: 158 QSQKG-GIG----LKGPGETQLETDRRLIQTKITALKRQLANVKKQRETRRKARL--SGS 210
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGKVLLSDT 351
L T+A+VGYTNAGKSTL + L+ SD+F+ +LFATLD + + L P ++LSDT
Sbjct: 211 ----LKTMAIVGYTNAGKSTLFNRLTKSDVFAKDQLFATLDTTARRLYLAPEASIILSDT 266
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+ DLP QLV AF ATLEE AD+L+H++D P E V VL + + +K+
Sbjct: 267 VGFVQDLPHQLVSAFSATLEETALADVLLHIVDAHDPEHERKIQDVNAVLAE--IKADKI 324
Query: 412 KNMIEVWNKID 422
+I V+NKID
Sbjct: 325 PQII-VYNKID 334
>gi|150026443|ref|YP_001297269.1| GTP-binding protein HflX [Flavobacterium psychrophilum JIP02/86]
gi|347602421|sp|A6H294.1|HFLX_FLAPJ RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|149772984|emb|CAL44468.1| GTP-binding protein HflX [Flavobacterium psychrophilum JIP02/86]
Length = 413
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 185/358 (51%), Gaps = 42/358 (11%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI- 142
+ N EE+ Y D F VV+ S K + TF G G +E I ++
Sbjct: 16 GIVTQNQSEEKLKEYLDELEFLTFTAGGEVVKRFSQKMERPNPKTFLGTGKIEEINLYVL 75
Query: 143 -NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAE 201
NG + I + L+ QQ+N+ + +LDR LI++IF A T A+ Q E
Sbjct: 76 ENG------ISTIVFDDELTPSQQKNISKIIDCKILDRTHLILDIFAQRAETSYARTQVE 129
Query: 202 LAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRI 261
LA +Y RL G T E R GG G + G GETE++ RR +
Sbjct: 130 LAQCIYLLPRL------SGMWTHLE-----------RQKGGIG-MRGPGETEIETDRRIV 171
Query: 262 LERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSD 321
+R + L +I+ + + +A QR R + VA+VGYTN GKSTL++A+ SD
Sbjct: 172 RDRIALLKEKIKIIDKQQATQRGNRG--------AMVRVALVGYTNVGKSTLMNAVGKSD 223
Query: 322 LFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVH 381
+F + +LFATLD ++ VV+ + LLSDTVGFI LP QLVD+F +TL+EV EADLL+H
Sbjct: 224 VFVENKLFATLDTTVRKVVIKNLPFLLSDTVGFIRKLPTQLVDSFKSTLDEVREADLLLH 283
Query: 382 VLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDI 439
V+D + + E+H V ++L + ++ K I V+NKID + ID DD+
Sbjct: 284 VVDISHQDFEDHIDAVNKILLDIKSAD---KPTIMVFNKIDAYKHLT-----IDADDL 333
>gi|237747715|ref|ZP_04578195.1| HflX GTP-binding protein [Oxalobacter formigenes OXCC13]
gi|229379077|gb|EEO29168.1| HflX GTP-binding protein [Oxalobacter formigenes OXCC13]
Length = 379
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 200/382 (52%), Gaps = 44/382 (11%)
Query: 114 VQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWG 173
V N + K A + G G V+ I ++ ++ D + N LS QQRNLE+
Sbjct: 35 VLNVTGKRASPDAAYYVGSGKVDEIVAAVHLYKA----DVVIFNHALSPAQQRNLEKRLE 90
Query: 174 KPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVV 233
V+DR LI++IF A + E K+Q ELA L + +RLVR G T
Sbjct: 91 VNVVDRTSLILDIFAQRAKSHEGKVQVELAQLQHLMTRLVR----------GWTHLE--- 137
Query: 234 SARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSD 293
R GG G + G GET+L+ RR I R L S++E+++R R QR +R R+
Sbjct: 138 ----RQKGGIG-LRGPGETQLETDRRLIGTRVRMLRSKLEKLQRQRETQRRSRNRNH--- 189
Query: 294 GRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTV 352
+ +V++VGYTNAGKSTL +A++ + + +LFATLD + + + +G V++SDTV
Sbjct: 190 ---VFSVSLVGYTNAGKSTLFNAMTKAGTYVADQLFATLDTTSRRIYIEETGNVVISDTV 246
Query: 353 GFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLK 412
GF+ +LP QLV AF ATLEE + ADLL+HV+D P +E V VL+++G E +
Sbjct: 247 GFVRELPHQLVAAFRATLEETIHADLLLHVVDAANPMRKEQIEQVNLVLKEIGA--ENVP 304
Query: 413 NMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGDDADN 470
++ VWNKID E G ++ D+ SR T +D+ + I Y +D +
Sbjct: 305 QLL-VWNKIDLAGLEPG----LERDEYGRISRVFVSAGTGAGLDLLRDAIAEYAKEDKTS 359
Query: 471 NDGFVSEDLGESMNKNHNDYSD 492
D+ E +H YSD
Sbjct: 360 R----MSDMDEGNGSDH--YSD 375
>gi|374852461|dbj|BAL55393.1| GTP-binding protein hflX [uncultured beta proteobacterium]
Length = 399
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 179/317 (56%), Gaps = 36/317 (11%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLER 170
+V +++ K TF G G V + + +GA D + N LS QQRNLE+
Sbjct: 41 IVGALTVRRAKPDPATFLGSGKVTELAALVREHGA------DLVVFNHALSPAQQRNLEK 94
Query: 171 AWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
A V+DR LI++IF A + E KLQ ELA L Y +RLVR G
Sbjct: 95 ALASRVVDRTTLILDIFALRAKSAEGKLQVELAQLEYLSTRLVR-------------GWT 141
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
+ RG G G RG GET+L+ RR I R L +Q++ ++ RA +R AR+R+G
Sbjct: 142 HLERQRG-GIGLRG----PGETQLETDRRLIGMRVKRLKAQLQRLQTQRATRRRARQRYG 196
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLS 349
+ V++VGYTNAGKSTL +AL+ + ++ +LFATLD + + LP +G V+LS
Sbjct: 197 ------VPQVSLVGYTNAGKSTLFNALTKAQTYAANQLFATLDTTSRRIWLPQTGNVVLS 250
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGFI DLP LV AFHATLEEV EADLL+ V D +P+ + R V + L+Q+G
Sbjct: 251 DTVGFIRDLPHDLVAAFHATLEEVKEADLLLVVSDLASPDADAQRLAVTETLRQIGAESV 310
Query: 410 KLKNMIEVWNKIDYHDE 426
++EV NKID D+
Sbjct: 311 P---ILEVGNKIDLLDQ 324
>gi|333375910|ref|ZP_08467708.1| GTP-binding protein HflX [Kingella kingae ATCC 23330]
gi|332969368|gb|EGK08393.1| GTP-binding protein HflX [Kingella kingae ATCC 23330]
Length = 378
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 174/311 (55%), Gaps = 32/311 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + + K KA + F G G E + + + ++ + N LS Q+RNLE+
Sbjct: 56 LVCSETAKRDKAHSALFVGTGKAEELAQVVQ----QNNIELVIFNHELSPTQERNLEKIL 111
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDRVGLI+ IF A ++E KLQ ELA L + SRLVR G +
Sbjct: 112 QCRVLDRVGLILAIFAQRAQSQEGKLQVELAQLSHLSSRLVR-------------GYKHL 158
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
S +G G G + G GET+L+ RR I + + L Q++ V++ R +R AR +
Sbjct: 159 QSQKG-GIG----LKGPGETQLETDRRLIQTKITQLRHQLDNVKKQRETRRKARLQGN-- 211
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGKVLLSDT 351
+ T A+VGYTNAGKSTL + L+ SD+ + +LFATLD + + L P ++L+DT
Sbjct: 212 ----IKTFAIVGYTNAGKSTLFNRLTKSDVLAKDQLFATLDTTARRLYLNPEASIILTDT 267
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+ DLP +LV AF ATLEE AD+L+H++D + P LE V VL + + +K+
Sbjct: 268 VGFVQDLPHKLVSAFSATLEETALADVLLHLVDASDPELERKIQDVNNVLAE--IKADKI 325
Query: 412 KNMIEVWNKID 422
++ V+NKID
Sbjct: 326 PQIL-VYNKID 335
>gi|296112906|ref|YP_003626844.1| GTP-binding proten HflX [Moraxella catarrhalis RH4]
gi|295920600|gb|ADG60951.1| GTP-binding proten HflX [Moraxella catarrhalis BBH18]
Length = 469
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 176/306 (57%), Gaps = 35/306 (11%)
Query: 123 KARADTFFGPGTVETI-----KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
K A F G G E I + ++ ++ IF N L+ Q+RNLE VL
Sbjct: 53 KPHAKYFVGTGKAEEIAEAVKRFRDTNDDNTDDVIVIF-NHTLTPSQERNLESLIKCRVL 111
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 112 DRTGLILDIFAQRARTHEGKLQVELAQLNHLATRLVR----------GWT-------HLE 154
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + L +++++V++TR RA R++ SD +
Sbjct: 155 RQKGGIG-LRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQK---SD---I 207
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
T+++VGYTNAGKSTL + L+D ++++ +LFATLDP L+ V P G V+L+DTVGF+
Sbjct: 208 PTISLVGYTNAGKSTLFNHLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVR 267
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV++FHATLEE +EADLL+HV+D + ++ V VL+Q+ ++
Sbjct: 268 HLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAP----ILL 323
Query: 417 VWNKID 422
V+NKID
Sbjct: 324 VFNKID 329
>gi|416231154|ref|ZP_11628699.1| GTP-binding proten HflX [Moraxella catarrhalis 46P47B1]
gi|416254498|ref|ZP_11638764.1| GTP-binding proten HflX [Moraxella catarrhalis O35E]
gi|326559950|gb|EGE10348.1| GTP-binding proten HflX [Moraxella catarrhalis 46P47B1]
gi|326577428|gb|EGE27312.1| GTP-binding proten HflX [Moraxella catarrhalis O35E]
Length = 469
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 176/306 (57%), Gaps = 35/306 (11%)
Query: 123 KARADTFFGPGTVETI-----KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
K A F G G E I + ++ ++ IF N L+ Q+RNLE VL
Sbjct: 53 KPHAKYFVGTGKAEEIAEAVKRFRDTNDDNTDDVIVIF-NHTLTPSQERNLESLIKCRVL 111
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 112 DRTGLILDIFAQRARTHEGKLQVELAQLNHLATRLVR----------GWT-------HLE 154
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + L +++++V++TR RA R++ SD +
Sbjct: 155 RQKGGIG-LRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQK---SD---I 207
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
T+++VGYTNAGKSTL + L+D ++++ +LFATLDP L+ V P G V+L+DTVGF+
Sbjct: 208 PTISLVGYTNAGKSTLFNHLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVR 267
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV++FHATLEE +EADLL+HV+D + ++ V VL+Q+ ++
Sbjct: 268 HLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAP----ILL 323
Query: 417 VWNKID 422
V+NKID
Sbjct: 324 VFNKID 329
>gi|320161098|ref|YP_004174322.1| GTP-binding protein [Anaerolinea thermophila UNI-1]
gi|319994951|dbj|BAJ63722.1| GTP-binding protein [Anaerolinea thermophila UNI-1]
Length = 451
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 169/313 (53%), Gaps = 24/313 (7%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K DT+ G G +E IK + ++ + + LS R LE
Sbjct: 50 VVGQTTQKLDAPHPDTYIGSGKIEEIKILVEETLAQ----VVLFDNELSPRHLRELEERL 105
Query: 173 GKPV--LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEA 230
G V LDR LI++IF HAHT+E LQ ELA Y+ RL R R G G
Sbjct: 106 GPHVRILDRTALILDIFAQHAHTREGILQVELAQYEYRLPRLTRAWTHLARQAGGGGGRT 165
Query: 231 EVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHG 290
+ G + G GET+L++ RR I +R + L +++E+VR R RA R+R
Sbjct: 166 GSMGGVG--------LRGPGETQLEVDRREIRKRIATLKAELEKVRAHRMRYRAQRQR-- 215
Query: 291 GSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKV-LLS 349
+ VA+VGYTNAGKSTL++ L++++++ +LFATLDP + V LP G + L +
Sbjct: 216 ----SQIPVVALVGYTNAGKSTLLNRLANAEVYVADQLFATLDPTTRRVELPGGHLALFT 271
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DTVGFI LP QLV AF ATLEE+ EADLL+HV+D T PN E V L+++
Sbjct: 272 DTVGFIQKLPTQLVAAFRATLEEIAEADLLLHVVDITHPNAFEQAQAVHATLKEIQADH- 330
Query: 410 KLKNMIEVWNKID 422
+I + NKID
Sbjct: 331 --IPVITLLNKID 341
>gi|227431380|ref|ZP_03913431.1| GTP-binding protein HflX [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227352843|gb|EEJ43018.1| GTP-binding protein HflX [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 433
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 131/358 (36%), Positives = 193/358 (53%), Gaps = 52/358 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A ++D I VN L+ Q RNLE+ V+DR GLI+EIF
Sbjct: 53 TYFGKGKVE----ELGEAVKTYDVDMIVVNDELTPSQIRNLEKTTDATVVDRTGLILEIF 108
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TK AKLQ +LA L Y+ RL R + + + + G+GG GF S
Sbjct: 109 AQRAQTKVAKLQVQLARLQYQLPRL--------RTSMSISLDQQT------GTGGAGFTS 154
Query: 248 -GAGETELQLQRRRILERRSHL---LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G+GET+L+ R+RI + H+ L+ +++ + TR +QR A L VA+V
Sbjct: 155 RGSGETKLEQSRQRITSQMVHVRQELADLDKSKNTRLMQRHAN---------NLPNVALV 205
Query: 304 GYTNAGKSTLVSAL-------SDSD----LFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
GYTNAGKSTL++ L +D+D +F LFATL+ ++ + LP + LLSDT
Sbjct: 206 GYTNAGKSTLMNRLLMRFGVGADNDDSKQVFEKDMLFATLNTTVRQLTLPDKRQFLLSDT 265
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+S LP LV AF +TL+E ADL++HV+D + + + T + L ++GV+
Sbjct: 266 VGFVSKLPHNLVAAFKSTLQEAANADLILHVVDVSDEHYKAMMETTEKTLTEIGVTG--- 322
Query: 412 KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDAD 469
K +I V+NK D D D I GD++ S DT S+ ++ I + +D++
Sbjct: 323 KPVITVYNKADRTDLHYPD---ISGDNVITLSAL---DTNSQDALIDLIVKHIFNDSE 374
>gi|374853209|dbj|BAL56123.1| GTP-binding protein HflX [uncultured gamma proteobacterium]
Length = 421
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 172/295 (58%), Gaps = 33/295 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE ++ + ++ D + N LS Q+RNLE+A G V+DR+GLI++IF
Sbjct: 57 FIGKGKVEEVRQAVAAHQA----DLVLFNHALSPSQERNLEQALGVRVVDRIGLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L +RLVR G T R GG G + G
Sbjct: 113 QRARSYEGKLQVELAQLRRMATRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEE-VRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GET+L+ RR I +R + QIE+ +RR +R +RR + L TVA+VGYTN
Sbjct: 155 PGETQLETDRRLIAQR----IRQIEQRLRRVEKQRRQSRRARKKVE---LPTVALVGYTN 207
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
AGKSTL +AL+++ +++ +LFATLD L+ + L +V+L+DTVGFI LP +L+ AF
Sbjct: 208 AGKSTLFNALTNAQVYAADQLFATLDSTLRRLELAGSQVILADTVGFIRHLPYELIAAFR 267
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TL+E EA++++HV+D +A V VL ++GV + ++EV+NKID
Sbjct: 268 STLQETCEAEVVLHVIDASAEQRLAQIEAVYAVLGELGVERGR---VLEVYNKID 319
>gi|418274502|ref|ZP_12890000.1| GTPase, HflX subfamily [Lactobacillus plantarum subsp. plantarum
NC8]
gi|376010068|gb|EHS83394.1| GTPase, HflX subfamily [Lactobacillus plantarum subsp. plantarum
NC8]
Length = 431
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 168/303 (55%), Gaps = 31/303 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TFFG G V IK + +L + +NA L+ Q RNLE ++DR GLI+EIF
Sbjct: 57 TFFGKGKVVEIK----EVAAANDLHIMVINADLTPSQVRNLEEQTDIQIIDRTGLILEIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A +KEAKLQ ++A L Y+ RL R + + + +A G G G
Sbjct: 113 GNRARSKEAKLQVKIAQLQYQLPRL--------RTSISNRLDQQAGAAAGGGGGFTN--R 162
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+L+L RR I +R SH +++E+ + V+R+ R D GL VA+VGYTN
Sbjct: 163 GAGETQLELNRRTIQDRISHAKHELKELNKDEVVRRSQR------DKAGLPNVALVGYTN 216
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKST ++ L D +F LFATLD ++ + P K +LLSDTVGF+SDLP
Sbjct: 217 AGKSTTMNGLVKLFGKGEDKQVFEKDMLFATLDTSIRQLTFPDNKQLLLSDTVGFVSDLP 276
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
L++AF +TL E ADLL+ V++ P+ +E T + L+++GV + MI +N
Sbjct: 277 HNLINAFRSTLAEAANADLLIQVINYADPHYKEMMATTEKTLKEIGVHDVP---MIYAFN 333
Query: 420 KID 422
K D
Sbjct: 334 KAD 336
>gi|416217283|ref|ZP_11624232.1| GTP-binding proten HflX [Moraxella catarrhalis 7169]
gi|416233349|ref|ZP_11629269.1| GTP-binding proten HflX [Moraxella catarrhalis 12P80B1]
gi|416238660|ref|ZP_11631540.1| GTP-binding proten HflX [Moraxella catarrhalis BC1]
gi|421779722|ref|ZP_16216214.1| GTP-binding proten HflX [Moraxella catarrhalis RH4]
gi|326561134|gb|EGE11499.1| GTP-binding proten HflX [Moraxella catarrhalis 7169]
gi|326566655|gb|EGE16796.1| GTP-binding proten HflX [Moraxella catarrhalis 12P80B1]
gi|326567977|gb|EGE18074.1| GTP-binding proten HflX [Moraxella catarrhalis BC1]
gi|407813432|gb|EKF84214.1| GTP-binding proten HflX [Moraxella catarrhalis RH4]
Length = 469
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 176/306 (57%), Gaps = 35/306 (11%)
Query: 123 KARADTFFGPGTVETI-----KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
K A F G G E I + ++ ++ IF N L+ Q+RNLE VL
Sbjct: 53 KPHAKYFVGTGKAEEIAEAVKRFRDTNDDNTDDVIVIF-NHTLTPSQERNLESLIKCRVL 111
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 112 DRTGLILDIFAQRARTHEGKLQVELAQLNHLATRLVR----------GWT-------HLE 154
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + L +++++V++TR RA R++ SD +
Sbjct: 155 RQKGGIG-LRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQK---SD---I 207
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
T+++VGYTNAGKSTL + L+D ++++ +LFATLDP L+ V P G V+L+DTVGF+
Sbjct: 208 PTISLVGYTNAGKSTLFNRLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVR 267
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV++FHATLEE +EADLL+HV+D + ++ V VL+Q+ ++
Sbjct: 268 HLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAP----ILL 323
Query: 417 VWNKID 422
V+NKID
Sbjct: 324 VFNKID 329
>gi|53723536|ref|YP_102999.1| GTP-binding protein HflX [Burkholderia mallei ATCC 23344]
gi|67639878|ref|ZP_00438707.1| GTP-binding proten HflX [Burkholderia mallei GB8 horse 4]
gi|254199944|ref|ZP_04906310.1| GTP-binding protein HflX [Burkholderia mallei FMH]
gi|254206277|ref|ZP_04912629.1| GTP-binding protein HflX [Burkholderia mallei JHU]
gi|52426959|gb|AAU47552.1| GTP-binding protein HflX [Burkholderia mallei ATCC 23344]
gi|147749540|gb|EDK56614.1| GTP-binding protein HflX [Burkholderia mallei FMH]
gi|147753720|gb|EDK60785.1| GTP-binding protein HflX [Burkholderia mallei JHU]
gi|238520488|gb|EEP83947.1| GTP-binding proten HflX [Burkholderia mallei GB8 horse 4]
Length = 387
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 179/335 (53%), Gaps = 37/335 (11%)
Query: 126 ADTFFGPGTVETIK--CHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLI 183
A F G G + ++ C N +++ + N L+ QQRNLER + V+DR LI
Sbjct: 47 AALFVGSGKADELRLACEAN------DVEIVIFNHALAPAQQRNLERVLNRRVIDRTSLI 100
Query: 184 IEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGR 243
++IF A + E KLQ ELA L Y +RL+R T E R GG
Sbjct: 101 LDIFAQRARSHEGKLQVELAQLQYLATRLIRA------WTHLE-----------RQKGGI 143
Query: 244 GFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G + G GE +L+ RR I ER L S+++++RR QR R R G +V++V
Sbjct: 144 G-LRGPGEMQLETDRRLIGERIKMLKSRLDKLRRQHHTQRRQRARSG------TLSVSLV 196
Query: 304 GYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL--PSGKVLLSDTVGFISDLPLQ 361
GYTNAGKSTL +AL+ + ++ +LFATLD + V L G++++SDTVGFI +LP Q
Sbjct: 197 GYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRELPHQ 256
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEE + ADLL+HV+D ++ E V VL+++G + I V+NKI
Sbjct: 257 LVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIR---QILVFNKI 313
Query: 422 DYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVD 456
D E ++ D+ N SR T + +D
Sbjct: 314 DAVPELAARGGAVERDEYGNISRVFLSARTGQGLD 348
>gi|416241280|ref|ZP_11632661.1| GTP-binding proten HflX [Moraxella catarrhalis BC7]
gi|326572797|gb|EGE22783.1| GTP-binding proten HflX [Moraxella catarrhalis BC7]
Length = 469
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 176/306 (57%), Gaps = 35/306 (11%)
Query: 123 KARADTFFGPGTVETI-----KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
K A F G G E I + ++ ++ IF N L+ Q+RNLE VL
Sbjct: 53 KPHAKYFVGTGKAEEIAEAVKRFRDTNDDNTDDVIVIF-NHTLTPSQERNLESLIKCRVL 111
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 112 DRTGLILDIFAQRARTHEGKLQVELAQLNHLATRLVR----------GWT-------HLE 154
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + L +++++V++TR RA R++ SD +
Sbjct: 155 RQKGGIG-LRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQK---SD---I 207
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
T+++VGYTNAGKSTL + L+D ++++ +LFATLDP L+ V P G V+L+DTVGF+
Sbjct: 208 PTISLVGYTNAGKSTLFNRLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVR 267
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV++FHATLEE +EADLL+HV+D + ++ V VL+Q+ ++
Sbjct: 268 HLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAP----ILL 323
Query: 417 VWNKID 422
V+NKID
Sbjct: 324 VFNKID 329
>gi|261379719|ref|ZP_05984292.1| GTP-binding protein HflX [Neisseria subflava NJ9703]
gi|284797392|gb|EFC52739.1| GTP-binding protein HflX [Neisseria subflava NJ9703]
Length = 386
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 170/295 (57%), Gaps = 32/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE + + + ++ + N L+ Q+RNLE+ VLDRVGLI+ IF
Sbjct: 75 FVGTGKVEELAAAVK----QHDVGLVVFNHELTPTQERNLEKELQCRVLDRVGLILAIFA 130
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A ++E KLQ ELA L + RLVR G + S +G G G + G
Sbjct: 131 KRAQSQEGKLQVELAQLNHLSGRLVR-------------GYGHLQSQKG-GIG----LKG 172
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I ++ + L Q+ +VR+ RA +R +R GR L T A+VGYTNA
Sbjct: 173 PGETQLETDRRLIGQKITALKKQLADVRKQRATRRKSR-----MSGR-LKTFAIVGYTNA 226
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFH 367
GKS+L + L+ +D+ + +LFATLD + + L V+L+DTVGF+ DLP +LV AF
Sbjct: 227 GKSSLFNRLTKADVLAKDQLFATLDTTARRLFLSHEASVILTDTVGFVRDLPHKLVSAFS 286
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEE AD+L+HV+D + P+ E V +VL+++G E + ++ V+NKID
Sbjct: 287 ATLEETAMADVLLHVVDASNPDFERQMDDVNEVLEEIGAHE--IPQLV-VYNKID 338
>gi|127511501|ref|YP_001092698.1| HSR1-like GTP-binding protein [Shewanella loihica PV-4]
gi|126636796|gb|ABO22439.1| GTP-binding protein, HSR1-related [Shewanella loihica PV-4]
Length = 432
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/311 (39%), Positives = 176/311 (56%), Gaps = 32/311 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E + + ++ + + N LS Q+RNLE VLDR LI++IF
Sbjct: 57 FVGTGKAEELAAMVAATDA----NVVIFNHALSPAQERNLELICQCRVLDRTTLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 113 QRARTYEGKLQVELAQLRHMSTRLIR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R + ++E+V + R R AR+R LATV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRGRIKTINKRLEKVDKQREQSRRARQRSE------LATVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHA 368
GKSTL +AL+ S++++ +LFATLDP L+ + L G V+L+DTVGFI LP LV AF A
Sbjct: 209 GKSTLFNALTVSEVYAADQLFATLDPTLRKLDLQDGSVILADTVGFIRHLPHDLVAAFKA 268
Query: 369 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEM 428
TL+E EADLL+HV+D N+ ++ V VL+++G E++ +I V NKID ++
Sbjct: 269 TLQETREADLLLHVVDSADENMGDNFEQVQLVLKEIGA--EEIPQLI-VCNKIDLLEDVG 325
Query: 429 GDVEYIDGDDI 439
++Y DGD +
Sbjct: 326 PKIDY-DGDGV 335
>gi|406592092|ref|YP_006739272.1| GTP-binding proten HflX [Chlamydia psittaci CP3]
gi|405787964|gb|AFS26707.1| GTP-binding proten HflX [Chlamydia psittaci CP3]
Length = 462
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 160/273 (58%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLPSG +VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T ++L+++GV K+ I V NKID
Sbjct: 321 AFEHIETTKEILKELGVDHPKI---ITVLNKID 350
>gi|403720426|ref|ZP_10943983.1| putative GTP-binding protein HflX [Gordonia rhizosphera NBRC 16068]
gi|403207745|dbj|GAB88314.1| putative GTP-binding protein HflX [Gordonia rhizosphera NBRC 16068]
Length = 497
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/319 (38%), Positives = 176/319 (55%), Gaps = 35/319 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G + ++ + + D + + L+ Q LE+ V+DR LI++IF
Sbjct: 125 TYIGSGKADELREAVLATGA----DTVICDGELTPAQLTALEKIVKVKVIDRTALILDIF 180
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR-GSGGRGFI 246
HA ++E K Q LA + Y L R+RG GE+ A GR GS G +
Sbjct: 181 AQHATSREGKAQVSLAQMEYM---LPRLRG---------WGESMSRQAGGRAGSNGGVGL 228
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+++ RRRI ER + L +I E++++R V RAAR R G + + VVGYT
Sbjct: 229 RGPGETKIETDRRRIRERMAKLRREIREMKKSRTVMRAARERTG------IPRLTVVGYT 282
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDA 365
NAGKS+LV+A++ + + LFATLDP + L G+ V+ +DTVGF+ LP QLV+A
Sbjct: 283 NAGKSSLVNAMTGAGVLVQNALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLVEA 342
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE--VWNKIDY 423
F +TLEEVV+ADLL+HV+D + P E + V QV+ +V V+EE + E V NKID
Sbjct: 343 FRSTLEEVVDADLLLHVVDGSDPFPAEQISAVRQVIGEV-VAEEGAQPPPELLVINKIDA 401
Query: 424 HDE--------EMGDVEYI 434
D GD Y+
Sbjct: 402 IDATRMTELRGAFGDAAYV 420
>gi|167625539|ref|YP_001675833.1| GTP1/OBG protein [Shewanella halifaxensis HAW-EB4]
gi|167355561|gb|ABZ78174.1| GTP1/OBG protein [Shewanella halifaxensis HAW-EB4]
Length = 431
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 173/307 (56%), Gaps = 31/307 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E + + ++ + + N LS Q+RNLER VLDR LI++IF
Sbjct: 57 FVGSGKAEELAAMVAATDA----NVVIFNHALSPAQERNLERLCECRVLDRTTLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 113 QRARTFEGKLQVELAQLRHMSTRLIR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R S + ++ +V + R R AR+R SD ++TV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRGRISTINRRLAKVDKQRDQSRRARQR---SD---MSTVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHA 368
GKSTL + L+ SD+++ +LFATLDP L+ + LP G V+L+DTVGFI LP LV AF A
Sbjct: 209 GKSTLFNGLTTSDVYAADQLFATLDPTLRKLDLPDGAVILADTVGFIRHLPHDLVAAFKA 268
Query: 369 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEM 428
TL+E +ADLL+HV+D + ++ V VL+++ E + +I V NKID DE
Sbjct: 269 TLQETRQADLLLHVVDSADEKMGDNFKQVQNVLKEIDAIE--IPQLI-VCNKIDLLDEVK 325
Query: 429 GDVEYID 435
++Y D
Sbjct: 326 PRIDYDD 332
>gi|395213597|ref|ZP_10400260.1| GTP-binding protein HflX, partial [Pontibacter sp. BAB1700]
gi|394456661|gb|EJF10931.1| GTP-binding protein HflX, partial [Pontibacter sp. BAB1700]
Length = 340
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 179/333 (53%), Gaps = 33/333 (9%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
+EQ + Y D F E V ++ K K TF G G +E I+ ++ + +
Sbjct: 28 DEQTNEYLDELAFLTETAGAVAMKRFVQKLDKPDTRTFVGSGKLEEIQAYVK----EHNI 83
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D + + LS Q RN+ER ++DR LI++IF A T +A Q ELA Y R
Sbjct: 84 DMVIFDDDLSPSQVRNIERELQVKIVDRSLLILDIFALRAKTAQAHTQVELAQYQYLLPR 143
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L + + + GG G + G GETE++ RR + ++ S L +
Sbjct: 144 L-----------------TNLWTHLSKQKGGIG-MKGPGETEIETDRRIVRDKISLLRDR 185
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
+E+ + QR +R G+ VA+VGYTN GKSTL++ LS SD+F++ +LFAT
Sbjct: 186 LEKFEKQNFEQRKSRA--------GMVRVALVGYTNVGKSTLMNLLSKSDVFAENKLFAT 237
Query: 332 LDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLE 391
+D ++ VVL + LLSDTVGFI LP +L++AF +TL+E+ EADLLVHV+D + P+ E
Sbjct: 238 VDATVRKVVLDNIPFLLSDTVGFIRKLPTKLIEAFKSTLDEIREADLLVHVVDVSHPSFE 297
Query: 392 EHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+H V L + ++ K ++ V+NKID +
Sbjct: 298 DHIAVVNDTLLDIKSAD---KPVLLVFNKIDQY 327
>gi|335423730|ref|ZP_08552750.1| GTP-binding protein HflX [Salinisphaera shabanensis E1L3A]
gi|334891193|gb|EGM29448.1| GTP-binding protein HflX [Salinisphaera shabanensis E1L3A]
Length = 447
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 172/305 (56%), Gaps = 32/305 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V+ I + E EL + N LS Q+RNLE+ VLDR GLI++IF
Sbjct: 57 FVGGGKVDEIAELV--VEHSAEL--VVFNHDLSPSQERNLEKRLNARVLDRAGLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
+ A + E KLQ ELA L + +RLVR G + + R GG G + G
Sbjct: 113 SRARSHEGKLQVELAQLQHLATRLVR-------------GWSHL----ERQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER L ++E+V R R+ARRR V++VGYTNA
Sbjct: 155 PGETQLETDRRLLNERIKMLRQRLEKVSARREQGRSARRRAR------TPIVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ D+++ +LFATLDP L+ + +P G+ ++++DTVGFI DLP +LV AF
Sbjct: 209 GKSTLFNRLTGEDIYAADQLFATLDPTLRRMDVPVGEPLIVADTVGFIRDLPHELVAAFK 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
ATLEE EAD+L+HV+D H V VL ++G E IEV+NK+D ++E
Sbjct: 269 ATLEETREADVLLHVIDAADVERRAHAREVNNVLDEIGAGEVP---QIEVFNKVDLIEDE 325
Query: 428 MGDVE 432
+E
Sbjct: 326 SARIE 330
>gi|416250649|ref|ZP_11637329.1| GTP-binding proten HflX [Moraxella catarrhalis CO72]
gi|326573980|gb|EGE23929.1| GTP-binding proten HflX [Moraxella catarrhalis CO72]
Length = 469
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 176/306 (57%), Gaps = 35/306 (11%)
Query: 123 KARADTFFGPGTVETI-----KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
K A F G G E I + ++ ++ IF N L+ Q+RNLE VL
Sbjct: 53 KPHAKYFVGTGKAEEIAEAVKRFRDTNDDNTDDVIVIF-NHTLTPSQERNLESLIKCRVL 111
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 112 DRTGLILDIFAQRARTHEGKLQVELAQLNHLATRLVR----------GWT-------HLE 154
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + L +++++V++TR RA R++ SD +
Sbjct: 155 RQKGGIG-LRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQK---SD---I 207
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
T+++VGYTNAGKSTL + L+D ++++ +LFATLDP L+ V P G V+L+DTVGF+
Sbjct: 208 PTISLVGYTNAGKSTLFNRLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVR 267
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV++FHATLEE +EADLL+HV+D + ++ V VL+Q+ ++
Sbjct: 268 HLPHELVESFHATLEEALEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAP----ILL 323
Query: 417 VWNKID 422
V+NKID
Sbjct: 324 VFNKID 329
>gi|76789109|ref|YP_328195.1| GTP-binding protein [Chlamydia trachomatis A/HAR-13]
gi|76167639|gb|AAX50647.1| HflX [Chlamydia trachomatis A/HAR-13]
Length = 447
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 164/273 (60%), Gaps = 24/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D +++ +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFA 259
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLP G +VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+ EH T +LQ++G+++ + +I V NK+D
Sbjct: 320 VLEHVETTKAILQELGITQPQ---VITVLNKMD 349
>gi|385811444|ref|YP_005847840.1| GTP-binding protein HflX [Ignavibacterium album JCM 16511]
gi|383803492|gb|AFH50572.1| GTP-binding protein HflX [Ignavibacterium album JCM 16511]
Length = 420
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 163/275 (59%), Gaps = 30/275 (10%)
Query: 149 GELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYK 208
E++ + + L+ +Q RNLE+ + + V+DR GLI++IF + A TKEAK Q ELA L Y
Sbjct: 77 NEINIVIFDDDLTPVQVRNLEKLFNRKVIDRSGLILDIFASRAKTKEAKTQVELAQLQYM 136
Query: 209 KSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHL 268
RL R + + GG G G GET+++ RR I R S L
Sbjct: 137 LPRLTRAW-----------------THLSKQYGGIG-TKGPGETQIETDRRLIRTRISLL 178
Query: 269 LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARL 328
+++E++ R Q + R+ G +A+ GYTNAGKSTL + L+++++F++ +L
Sbjct: 179 KNKLEKIEAHRMTQSSGRK--------GFLRIAIAGYTNAGKSTLFNLLTEANVFAENKL 230
Query: 329 FATLDPRLKSV-VLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTA 387
FATLD +S+ + + K+L+SDTVGFI LP L+ +F +TL EV +AD+++HV+D +
Sbjct: 231 FATLDSTTRSLDIDDTHKILISDTVGFIRKLPAHLIASFKSTLNEVRDADIILHVIDISH 290
Query: 388 PNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
P E+H V + L++ G +E K +I+V+NK+D
Sbjct: 291 PYFEDHIKVVDETLKEFGSAE---KRVIKVFNKVD 322
>gi|339491260|ref|YP_004705765.1| GTPase [Leuconostoc sp. C2]
gi|338852932|gb|AEJ31142.1| GTPase [Leuconostoc sp. C2]
Length = 432
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 170/308 (55%), Gaps = 40/308 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A E+D I N LS Q RNLE+A VLDR GLI++IF
Sbjct: 59 TYFGKGKVE----ELAEAVKTYEVDMIVANDELSPSQIRNLEKATQATVLDRTGLILDIF 114
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEAKLQ +LA L Y+ RL R + + + + G+GG GF S
Sbjct: 115 AQRAQTKEAKLQVQLARLQYQLPRL--------RTSMSVSLDQQT------GAGGGGFTS 160
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GAGET+L+ RRRI + H+ + ++ T+ A +RH L VA+VGYT
Sbjct: 161 RGAGETKLEESRRRITAQMVHIRQDLADL--TKGETTRASKRHTND----LPNVALVGYT 214
Query: 307 NAGKSTLVSAL-------SDSD----LFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGF 354
NAGKSTL++ L +D+D +F LFATL+ ++ + LP K LLSDTVGF
Sbjct: 215 NAGKSTLMNRLLERFGVGADNDESKQVFEKDMLFATLNTTIRQLTLPDKKQFLLSDTVGF 274
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+S LP LV F +TL+E ADLL+ V+D + + +E T + L +VGVS+ M
Sbjct: 275 VSKLPHNLVATFKSTLQEAAHADLLLQVVDISDEHYKEMMATTEKTLAEVGVSDVP---M 331
Query: 415 IEVWNKID 422
I ++NK D
Sbjct: 332 ITIYNKAD 339
>gi|407460442|ref|YP_006738217.1| GTP-binding proten HflX [Chlamydia psittaci WC]
gi|405787157|gb|AFS25901.1| GTP-binding proten HflX [Chlamydia psittaci WC]
Length = 462
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 160/273 (58%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAK------EKRGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLPSG +VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T ++L+++GV K +I V NKID
Sbjct: 321 AFEHIETTKEILKELGVDHPK---IITVLNKID 350
>gi|381401563|ref|ZP_09926461.1| GTP-binding protein [Kingella kingae PYKK081]
gi|380833417|gb|EIC13287.1| GTP-binding protein [Kingella kingae PYKK081]
Length = 378
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 174/311 (55%), Gaps = 32/311 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
+V + + K KA + F G G E + + + ++ + N LS Q+RNLE+
Sbjct: 56 LVCSETAKRDKAHSALFVGTGKAEELAQVVQ----QNNIELVIFNHELSPTQERNLEKIL 111
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDRVGLI+ IF A ++E KLQ ELA L + SRLVR G +
Sbjct: 112 QCRVLDRVGLILAIFAQRAQSQEGKLQVELAQLSHLSSRLVR-------------GYKHL 158
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
S +G G G + G GET+L+ RR I + + L Q++ V++ R +R AR +
Sbjct: 159 QSQKG-GIG----LKGPGETQLETDRRLIQTKITQLRRQLDNVKKQRETRRKARLQGN-- 211
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGKVLLSDT 351
+ T A+VGYTNAGKSTL + L+ SD+ + +LFATLD + + L P ++L+DT
Sbjct: 212 ----IKTFAIVGYTNAGKSTLFNRLTKSDVLAKDQLFATLDTTARRLYLNPEASIILTDT 267
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+ DLP +LV AF ATLEE AD+L+H++D + P LE V VL + + +K+
Sbjct: 268 VGFVQDLPHKLVSAFSATLEETALADVLLHLVDASDPELERKIQDVNDVLAE--IKADKI 325
Query: 412 KNMIEVWNKID 422
++ V+NKID
Sbjct: 326 PQIL-VYNKID 335
>gi|416155578|ref|ZP_11603990.1| GTP-binding proten HflX [Moraxella catarrhalis 101P30B1]
gi|416221129|ref|ZP_11625695.1| GTP-binding proten HflX [Moraxella catarrhalis 103P14B1]
gi|416247632|ref|ZP_11635815.1| GTP-binding proten HflX [Moraxella catarrhalis BC8]
gi|326565439|gb|EGE15611.1| GTP-binding proten HflX [Moraxella catarrhalis 103P14B1]
gi|326569444|gb|EGE19504.1| GTP-binding proten HflX [Moraxella catarrhalis BC8]
gi|326577052|gb|EGE26947.1| GTP-binding proten HflX [Moraxella catarrhalis 101P30B1]
Length = 469
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 176/306 (57%), Gaps = 35/306 (11%)
Query: 123 KARADTFFGPGTVETI-----KCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
K A F G G E I + ++ ++ IF N L+ Q+RNLE VL
Sbjct: 53 KPHAKYFVGTGKAEEIAEAVKRFRDTNDDNTDDVIVIF-NHTLTPSQERNLESLIKCRVL 111
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 112 DRTGLILDIFAQRARTHEGKLQVELAQLNHLATRLVR----------GWT-------HLE 154
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + L +++++V++TR RA R++ SD +
Sbjct: 155 RQKGGIG-LRGPGETQLETDRRLLQIRVTQLKAKLDKVKQTRKQGRAKRQK---SD---I 207
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
T+++VGYTNAGKSTL + L+D ++++ +LFATLDP L+ V P G V+L+DTVGF+
Sbjct: 208 PTISLVGYTNAGKSTLFNRLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFVR 267
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV++FHATLEE +EADLL+HV+D + ++ V VL+Q+ ++
Sbjct: 268 HLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQADAP----ILL 323
Query: 417 VWNKID 422
V+NKID
Sbjct: 324 VFNKID 329
>gi|237802803|ref|YP_002887997.1| putative nucleotide-binding protein [Chlamydia trachomatis
B/Jali20/OT]
gi|237804725|ref|YP_002888879.1| putative nucleotide-binding protein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|376282384|ref|YP_005156210.1| putative nucleotide-binding protein [Chlamydia trachomatis A2497]
gi|385270068|ref|YP_005813228.1| GTP-binding protein [Chlamydia trachomatis A2497]
gi|231273025|emb|CAX09938.1| putative nucleotide-binding protein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274037|emb|CAX10831.1| putative nucleotide-binding protein [Chlamydia trachomatis
B/Jali20/OT]
gi|347975208|gb|AEP35229.1| HflX [Chlamydia trachomatis A2497]
gi|371908414|emb|CAX09044.1| putative nucleotide-binding protein [Chlamydia trachomatis A2497]
gi|438690308|emb|CCP49565.1| GTPase HflX [Chlamydia trachomatis A/7249]
gi|438691392|emb|CCP48666.1| GTPase HflX [Chlamydia trachomatis A/5291]
gi|438692765|emb|CCP47767.1| GTPase HflX [Chlamydia trachomatis A/363]
Length = 447
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 164/273 (60%), Gaps = 24/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D +++ +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFA 259
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLP G +VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+ EH T +LQ++G+++ + +I V NK+D
Sbjct: 320 VLEHVETTKAILQELGITQPQ---VITVLNKMD 349
>gi|212555149|gb|ACJ27603.1| GTP-binding protein HflX [Shewanella piezotolerans WP3]
Length = 431
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/324 (38%), Positives = 180/324 (55%), Gaps = 34/324 (10%)
Query: 115 QNPSLKSGKARA---DTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
Q+ + +G RA F G G E + + ++ + + N LS Q+RN+E
Sbjct: 40 QSIGVITGSRRAPDRKFFVGSGKAEELAAMVAATDA----NVVIFNHALSPAQERNVEHL 95
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
VLDR LI++IF A T E KLQ ELA L + +RL+R G T
Sbjct: 96 CECRVLDRTALILDIFAQRARTYEGKLQVELAQLRHMSTRLIR----------GWTHLE- 144
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G + G GET+L+ RR + R + ++ +V + R R AR+R
Sbjct: 145 ------RQKGGIG-LRGPGETQLETDRRLLRGRIRTINKRLAKVDKQRDQSRRARQR--- 194
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDT 351
SD ++TV++VGYTNAGKSTL +AL+ SD+++ +LFATLDP L+ + LP G ++L+DT
Sbjct: 195 SD---MSTVSLVGYTNAGKSTLFNALTASDVYAADQLFATLDPTLRKLELPDGHIVLADT 251
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFI LP LV AF ATL+E +ADLL+HV+D N+ ++ V VL+++ E +
Sbjct: 252 VGFIRHLPHDLVAAFKATLQETRQADLLLHVVDSADENMADNFEQVQSVLKEIDADE--I 309
Query: 412 KNMIEVWNKIDYHDEEMGDVEYID 435
+I + NKID DE ++Y D
Sbjct: 310 PQLI-ICNKIDLLDEVKPRIDYDD 332
>gi|406594858|ref|YP_006741420.1| GTP-binding proten HflX [Chlamydia psittaci MN]
gi|405783290|gb|AFS22038.1| GTP-binding proten HflX [Chlamydia psittaci MN]
Length = 462
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 160/273 (58%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLPSG +VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T ++L+++GV K+ I V NKID
Sbjct: 321 AFEHIETTKEILKELGVDHPKI---ITVLNKID 350
>gi|381337242|ref|YP_005175017.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|356645208|gb|AET31051.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 433
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/358 (36%), Positives = 193/358 (53%), Gaps = 52/358 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A ++D I VN L+ Q RNLE+ V+DR GLI+EIF
Sbjct: 53 TYFGKGKVE----ELGEAVKTYDVDMIVVNDELTPSQIRNLEKTTDATVVDRTGLILEIF 108
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TK AKLQ +LA L Y+ RL R + + + + G+GG GF S
Sbjct: 109 AQRAQTKVAKLQVQLARLQYQLPRL--------RTSMSISLDQQT------GTGGAGFTS 154
Query: 248 -GAGETELQLQRRRILERRSHL---LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G+GET+L+ R+RI + H+ L+ +++ TR++QR A L VA+V
Sbjct: 155 RGSGETKLEQSRQRITSQMVHVRQELADLDKSENTRSMQRHAN---------NLPNVALV 205
Query: 304 GYTNAGKSTLVSAL-------SDSD----LFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
GYTNAGKSTL++ L +D+D +F LFATL+ ++ + LP + LLSDT
Sbjct: 206 GYTNAGKSTLMNRLLMRFGVGADNDDSKQVFEKDMLFATLNTTVRQLTLPDKRQFLLSDT 265
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+S LP LV AF +TL+E ADL++HV+D + + + T Q L ++GV+
Sbjct: 266 VGFVSKLPHNLVAAFKSTLQEAANADLILHVVDVSDEHYKAMMETTEQTLTEIGVTG--- 322
Query: 412 KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDAD 469
K +I V+NK D + D I GD++ S DT S+ ++ I + +D++
Sbjct: 323 KPVITVYNKADRTELHYPD---ISGDNVITLSAL---DTNSQDALIDLIVKHIFNDSE 374
>gi|449124763|ref|ZP_21761081.1| GTP-binding protein HflX [Treponema denticola OTK]
gi|449129761|ref|ZP_21765990.1| GTP-binding protein HflX [Treponema denticola SP37]
gi|448941305|gb|EMB22207.1| GTP-binding protein HflX [Treponema denticola OTK]
gi|448945251|gb|EMB26125.1| GTP-binding protein HflX [Treponema denticola SP37]
Length = 391
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/328 (39%), Positives = 174/328 (53%), Gaps = 36/328 (10%)
Query: 105 DKELPPHV--VVQNP----SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNA 158
+KEL V + NP + K T G G +E I I E +G D + N+
Sbjct: 46 EKELKSLVETIFLNPLSSLRFRIAKENPATLVGSGQLEKIAQAI---EEEGA-DLVVFNS 101
Query: 159 ILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGP 218
+S QRNLE A V+DR +II+IF A T+EA LQAELA L Y RL R
Sbjct: 102 AVSPRIQRNLEAALNTCVIDRSEVIIQIFADRAQTREAVLQAELARLEYSMPRLTR---- 157
Query: 219 DGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRT 278
R T + RG G RG GAGE +L+L RRR+ + L ++E VR
Sbjct: 158 --RWT-------SLAQQRGGAKGTRGASRGAGEKKLELDRRRLKTEIAKLKKEVERVRLQ 208
Query: 279 RAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKS 338
R+ QR + R G G A+VGYTNAGKS+L+ LS +++F++ +LFATLD +
Sbjct: 209 RSEQR--KTRLNGDKKIG----AIVGYTNAGKSSLLKKLSGAEVFTEDKLFATLDAETRK 262
Query: 339 VVLPSG----KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHR 394
V L +G ++LL+DTVGF+S+LP QL+DAF +TLEE AD L+ V D P + E
Sbjct: 263 VFLQAGDKNIQILLTDTVGFVSNLPHQLIDAFRSTLEEAALADFLIIVCDAAHPAMPECL 322
Query: 395 TTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+VL ++ S K I NK+D
Sbjct: 323 EVTKKVLDELSCSG---KPSIIAINKMD 347
>gi|312976818|ref|ZP_07788567.1| GTP-binding protein HflX [Lactobacillus crispatus CTV-05]
gi|423319439|ref|ZP_17297315.1| GTP-binding protein HflX [Lactobacillus crispatus FB049-03]
gi|423320982|ref|ZP_17298854.1| GTP-binding protein HflX [Lactobacillus crispatus FB077-07]
gi|310896146|gb|EFQ45211.1| GTP-binding protein HflX [Lactobacillus crispatus CTV-05]
gi|405588443|gb|EKB62109.1| GTP-binding protein HflX [Lactobacillus crispatus FB049-03]
gi|405598041|gb|EKB71281.1| GTP-binding protein HflX [Lactobacillus crispatus FB077-07]
Length = 421
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 195/372 (52%), Gaps = 43/372 (11%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKA-RADTFFGPGTVE 136
Q K +A +L +Q Y+ T+ + ++ V S ++ ++ A T+FG G +
Sbjct: 5 QPKKTKAYIAGVNLNDQNFDYYMTELANLTEANNMEVVGQSFQNAESIVAGTYFGVGKIN 64
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
I+ G ++K + +N L+ +Q RNLE+ V+DR LI+EIF + A TK+A
Sbjct: 65 EIRTMAQGLKAK----VLVLNDKLTPVQIRNLEKLTKMRVIDRTELILEIFASRARTKQA 120
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ +LA L Y+ RL E + RG G RG AGE++L+L
Sbjct: 121 KLQVQLARLQYELPRL-------------HPSENNLDQQRGGGFANRG----AGESKLEL 163
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I ++ S + +++ V + +AARR + VA+VGYTNAGKST ++
Sbjct: 164 NRRTIGKQISAIKKELKAVAGQEEI-KAARRNQSR-----IPKVALVGYTNAGKSTTMNG 217
Query: 317 L--------SDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFH 367
L +D ++F LFATLD ++ + L +LSDTVGFIS LP LV++F
Sbjct: 218 LLREFSKEGADKEVFVKNMLFATLDTSVRRINLKDNFSFILSDTVGFISKLPHNLVESFK 277
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
ATL+E +ADLL++V+D + PN+ + T VL ++GV E MI +NK D D
Sbjct: 278 ATLQETRDADLLINVVDASDPNMVQMIRTTQNVLDEIGVKEIP---MITAYNKADKTDRN 334
Query: 428 MGDVEYIDGDDI 439
+E GDDI
Sbjct: 335 YPQIE---GDDI 343
>gi|406830260|ref|ZP_11089854.1| GTP-binding proten HflX [Schlesneria paludicola DSM 18645]
Length = 437
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/302 (39%), Positives = 173/302 (57%), Gaps = 33/302 (10%)
Query: 122 GKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVG 181
G+ T G G +E +K + ++ G IF N L+ Q R+LE + ++DR
Sbjct: 57 GRPHPGTCLGKGKIEELK---DLVDATGAELIIFDNN-LTPSQGRHLELETKRIIVDRSE 112
Query: 182 LIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSG 241
LI++IF HA + EA+LQ ELA L Y ++RL R+ R+ G
Sbjct: 113 LILDIFATHARSAEARLQVELAQLQYTRTRLKRMWTHLERI-----------------EG 155
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G G G GE +++ RR I +R L ++ EV R +R R+R S V+
Sbjct: 156 GIGASRGPGEKQIETDRRIIDQRIDELKLRLAEVEVRR--ERMVRQRESHS------LVS 207
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPL 360
VVGYTNAGKSTL++AL+ +D++ +LFATLD R + +PS G++LLSDTVGF+ DLP
Sbjct: 208 VVGYTNAGKSTLMNALTGADVYVANQLFATLDTRTRKWTIPSWGELLLSDTVGFVRDLPH 267
Query: 361 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 420
LV +F +TLEE +ADLL+HV+D + P E+ TV QVL ++GV +++N I V NK
Sbjct: 268 SLVASFKSTLEEARQADLLLHVVDASNPEAEQQAETVEQVLNEIGV---EIRNYILVLNK 324
Query: 421 ID 422
+D
Sbjct: 325 VD 326
>gi|153855189|ref|ZP_01996373.1| hypothetical protein DORLON_02387 [Dorea longicatena DSM 13814]
gi|149752358|gb|EDM62289.1| GTP-binding protein HflX [Dorea longicatena DSM 13814]
Length = 422
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 183/344 (53%), Gaps = 36/344 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+ G G +E +K I + G I + LS Q +NL+ V+DR +I++IF
Sbjct: 57 TYVGKGKIEELKSMIWELRATG----IVCDDELSPAQMKNLQDELDVKVMDRTLIILDIF 112
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A A T E K+Q ELA L Y+++RL RL G
Sbjct: 113 AARASTSEGKIQVELAQLKYQQTRLAGFGKAMSRLGGGIGTRG----------------- 155
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GE +L++ RR I R + L ++++V++ R V R R R + A+VGYTN
Sbjct: 156 -PGEKKLEMDRRLIKSRIAQLNRELKDVKKHREVTREQRSRSH------IPVAAIVGYTN 208
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
AGKSTL++ L+ + +F++ +LFATLDP + + LPSG+ +L++DTVGFI LP L++AF
Sbjct: 209 AGKSTLLNTLTGAGIFAEDKLFATLDPTTRDLKLPSGQEILMTDTVGFIRKLPHHLIEAF 268
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE-------KLKNMIEVWN 419
+TLEE AD+++HV+D + P ++E TV + LQ +GV ++ K+ M ++W
Sbjct: 269 RSTLEEARYADIILHVVDASNPQMDEQMHTVYETLQNLGVKDKPVITVFNKIDRMEDIWV 328
Query: 420 KIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNY 463
D H + + G+ I+ F ++ + + V++E + Y
Sbjct: 329 PRDLHADYYVKISARTGEGITEFLQSVEAVLREQKVEIEALYPY 372
>gi|399002323|ref|ZP_10705011.1| GTP-binding protein HflX [Pseudomonas sp. GM18]
gi|398125098|gb|EJM14587.1| GTP-binding protein HflX [Pseudomonas sp. GM18]
Length = 433
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 173/298 (58%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A T G VE ++ + + +D + N IL+ Q+RNLER + V+DR GLI++
Sbjct: 55 AKTLISSGKVEELRDLVKAEQ----VDLVIFNHILTPSQERNLERIFECRVIDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L Y +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEYMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++E+VR R R R+R +D + TV++VGY
Sbjct: 153 LRGPGETQLETDRRLLRIRLRQIKGRLEKVRSQREQSRRGRKR---AD---IPTVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL ++++DSD+F+ +LFATLDP L+ + L G ++L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNSVTDSDVFAANQLFATLDPTLRRLELEDLGPIVLADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATLEE +DLL+HV+D P+ V+ VL ++G + ++EV+NK+D
Sbjct: 267 AFRATLEESSNSDLLLHVIDAHEPDRMAQIEQVMVVLGEIGAQD---LPILEVYNKLD 321
>gi|375106255|ref|ZP_09752516.1| GTP-binding protein HflX [Burkholderiales bacterium JOSHI_001]
gi|374666986|gb|EHR71771.1| GTP-binding protein HflX [Burkholderiales bacterium JOSHI_001]
Length = 407
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 167/299 (55%), Gaps = 32/299 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G + IK + ++ G + + LS QQRNLER G PV DR LI+EIF
Sbjct: 69 FVGSGKADEIKELVLVHQAHG----VVFDQALSPAQQRNLERHLGVPVADRTALILEIFA 124
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L Y +RLVR R + E V G
Sbjct: 125 RRAQSHEGKLQVELARLQYLSTRLVR------RWSHLERQRGGVGHR-----------GG 167
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE +++L RR I ER L +++ +V+R R QR AR R G V++VGYTNA
Sbjct: 168 PGEAQIELDRRMIGERIKSLKARLVKVQRQRGTQRKARERSGTF------RVSLVGYTNA 221
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP--SGKVLLSDTVGFISDLPLQLVDAF 366
GKSTL +AL + ++ +LFATLD +S+ L G V LSDTVGFI DLP +LV+AF
Sbjct: 222 GKSTLFNALVKARAYAADQLFATLDTTTRSLYLEELGGSVSLSDTVGFIRDLPHRLVEAF 281
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
ATL+E V+ADLL+HV+D ++P L E R V +VL ++G + + V+NK+D D
Sbjct: 282 KATLQEAVDADLLLHVVDASSPLLHEQRDEVERVLFEIGAQD---IPQLLVFNKLDQID 337
>gi|366163885|ref|ZP_09463640.1| small GTP-binding protein [Acetivibrio cellulolyticus CD2]
Length = 619
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 167/299 (55%), Gaps = 32/299 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + C I A ++D I + LSG Q RN+E G V+DR LI++IF
Sbjct: 260 YIGRGKLEEL-CLIRQAL---DIDLIVFDDELSGAQLRNIEELVGIKVIDRTTLILDIFA 315
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE KLQ ELA L Y+ SRL+ + RL G
Sbjct: 316 QRARSKEGKLQVELAQLKYRVSRLIGLGNQLSRLGGGIGTRG------------------ 357
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE +L++ RR I R S+L S++ EV + R R +R R L VA+VGYTNA
Sbjct: 358 PGEKKLEVDRRHIRRRISYLESELSEVEKRRGFMRKSRDRDS------LPVVALVGYTNA 411
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ L SD+ ++ +LFATLDP +++ LP+G+ LL DTVGFI LP +L+++F
Sbjct: 412 GKSTLMNTLCKSDVLAEDKLFATLDPTARNLKLPNGREALLIDTVGFIRKLPHELIESFK 471
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
+TLEE V AD+L+HV+D T+ +E V +L +G S K ++ NK+D +E
Sbjct: 472 STLEEAVYADVLIHVVDVTSYEAQEQIEVVDNILNALGASS---KPIVMALNKVDMLEE 527
>gi|329942586|ref|ZP_08291396.1| GTP-binding proten HflX [Chlamydophila psittaci Cal10]
gi|332287216|ref|YP_004422117.1| GTP-binding protein [Chlamydophila psittaci 6BC]
gi|384450370|ref|YP_005662970.1| GTP-binding protein HflX [Chlamydophila psittaci 6BC]
gi|384451369|ref|YP_005663967.1| GTP-binding protein [Chlamydophila psittaci 01DC11]
gi|384452345|ref|YP_005664942.1| GTP-binding protein [Chlamydophila psittaci 08DC60]
gi|384453319|ref|YP_005665915.1| GTP-binding protein [Chlamydophila psittaci C19/98]
gi|384454297|ref|YP_005666892.1| GTP-binding protein [Chlamydophila psittaci 02DC15]
gi|392376467|ref|YP_004064245.1| putative GTP-binding protein [Chlamydophila psittaci RD1]
gi|407453763|ref|YP_006732871.1| GTP-binding proten HflX [Chlamydia psittaci 84/55]
gi|407456466|ref|YP_006735039.1| GTP-binding proten HflX [Chlamydia psittaci VS225]
gi|449070921|ref|YP_007438001.1| putative GTP-binding protein [Chlamydophila psittaci Mat116]
gi|313847810|emb|CBY16801.1| putative GTP-binding protein [Chlamydophila psittaci RD1]
gi|325506512|gb|ADZ18150.1| GTP-binding protein [Chlamydophila psittaci 6BC]
gi|328815496|gb|EGF85484.1| GTP-binding proten HflX [Chlamydophila psittaci Cal10]
gi|328914464|gb|AEB55297.1| GTP-binding protein HflX [Chlamydophila psittaci 6BC]
gi|334692100|gb|AEG85319.1| GTP-binding protein [Chlamydophila psittaci C19/98]
gi|334693079|gb|AEG86297.1| GTP-binding protein [Chlamydophila psittaci 01DC11]
gi|334694054|gb|AEG87271.1| GTP-binding protein [Chlamydophila psittaci 02DC15]
gi|334695034|gb|AEG88250.1| GTP-binding protein [Chlamydophila psittaci 08DC60]
gi|405780522|gb|AFS19272.1| GTP-binding proten HflX [Chlamydia psittaci 84/55]
gi|405783727|gb|AFS22474.1| GTP-binding proten HflX [Chlamydia psittaci VS225]
gi|449039429|gb|AGE74853.1| putative GTP-binding protein [Chlamydophila psittaci Mat116]
Length = 462
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 160/273 (58%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLPSG +VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T ++L+++GV K +I V NKID
Sbjct: 321 AFEHIETTKEILKELGVDHPK---IITVLNKID 350
>gi|126666952|ref|ZP_01737928.1| GTPase [Marinobacter sp. ELB17]
gi|126628668|gb|EAZ99289.1| GTPase [Marinobacter sp. ELB17]
Length = 432
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 172/299 (57%), Gaps = 32/299 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I+ + AE+ L N LS Q+RN+ER VLDR G+I++IF
Sbjct: 57 FVGDGKLEEIRAAVAAAEADVVL----FNHSLSPSQERNIERELQCRVLDRTGVILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLQHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER + ++E+VRR R R AR R L TV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRERIKSINKRLEKVRRQRDQGRRARVRAD------LPTVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + ++ SD+++ +LFATLDP ++ + LP G V+L+DTVGFI LP +LV++F
Sbjct: 209 GKSTLFNRITSSDVYTADQLFATLDPTMRRLELPDIGAVILADTVGFIRHLPHKLVESFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEE EA LL+HV+DC +++ V VL ++G E +++V+NK D D+
Sbjct: 269 ATLEETNEAALLLHVIDCHDERRDDNIAQVENVLAEIGADEVP---VLQVFNKTDLLDD 324
>gi|307545953|ref|YP_003898432.1| GTP-binding protein HflX [Halomonas elongata DSM 2581]
gi|307217977|emb|CBV43247.1| K03665 GTP-binding protein HflX [Halomonas elongata DSM 2581]
Length = 438
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 176/310 (56%), Gaps = 34/310 (10%)
Query: 119 LKSGKARADT--FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPV 176
L + R D F G G +E ++ + A + EL + N LS Q+RN+E+A V
Sbjct: 46 LTGSRGRPDPRFFIGSGKLEEVREAL--AVHQAEL--VIFNHALSPSQERNVEQALKCRV 101
Query: 177 LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSAR 236
LDR GLI++IF A T E KLQ ELA L Y +RLVR G T
Sbjct: 102 LDRTGLILDIFAQRARTHEGKLQVELAQLEYMSTRLVR----------GWTHLE------ 145
Query: 237 GRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRG 296
R GG G + G GET+L+ RR + R + ++++VR R R AR R
Sbjct: 146 -RQKGGIG-LRGPGETQLETDRRLLRGRIKAIHKRLDKVRSQRGQNRRARSRAE------ 197
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSV-VLPSGKVLLSDTVGFI 355
+ +V++VGYTNAGKSTL +AL++S +++ +LFATLDP L+ + V G V+L+DTVGFI
Sbjct: 198 IPSVSLVGYTNAGKSTLFNALTESRVYAADQLFATLDPTLRRLEVEDVGPVVLADTVGFI 257
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI 415
LP +LV+AF ATL+E EA LLVHV+D P+ + + T V +VL ++G + +
Sbjct: 258 RHLPHKLVEAFQATLQEAAEASLLVHVIDAADPDRDLNVTQVEEVLDEIGALD---VPTL 314
Query: 416 EVWNKIDYHD 425
+V NK+D D
Sbjct: 315 KVMNKVDLFD 324
>gi|344943929|ref|ZP_08783215.1| GTP-binding proten HflX [Methylobacter tundripaludum SV96]
gi|344259587|gb|EGW19860.1| GTP-binding proten HflX [Methylobacter tundripaludum SV96]
Length = 421
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/331 (38%), Positives = 186/331 (56%), Gaps = 37/331 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E +K I E+ D + N LS Q+RNLE G V+DR GLI++IF
Sbjct: 55 FVGKGKLEELKAIIETYEA----DIVLFNHPLSPSQERNLEGFLGVRVVDRNGLILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 111 QRAQTFEGKLQVELAQLQHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 152
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R + ++++V + R R+ R++ + +V++VGYTNA
Sbjct: 153 PGETQLETDRRLLGLRIKQIQQRLDKVDKQRHQGRSKRKKAE------VPSVSLVGYTNA 206
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ +D++ +LFATLDP L++ LP S +++L+DTVGFI LP +LV AF
Sbjct: 207 GKSTLFNKLTGADIYVADQLFATLDPTLRNCKLPNSSEIVLADTVGFIRHLPHELVAAFK 266
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+E EADLL+HV+D ++ + E V QVL+ + +E + +EV+NKID
Sbjct: 267 STLQEASEADLLLHVIDASSDDRAETIYQVNQVLEDIKANEVR---QLEVFNKIDL---- 319
Query: 428 MGDVE-YIDGDDISNFSRAEDKDTTSEPVDV 457
+ D++ I+ DD+ N R T VD+
Sbjct: 320 LTDIQPRIERDDVGNPVRVWLSAETGAGVDL 350
>gi|261378704|ref|ZP_05983277.1| GTP-binding protein HflX [Neisseria cinerea ATCC 14685]
gi|269144857|gb|EEZ71275.1| GTP-binding protein HflX [Neisseria cinerea ATCC 14685]
Length = 393
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 165/295 (55%), Gaps = 32/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G VE + ++ + +D + N L+ Q+RNLE+ VLDRVGLI+ IF
Sbjct: 74 FVGTGKVEELAANV----AANGIDLVVFNHELTPTQERNLEKELKCRVLDRVGLILAIFA 129
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E +LQ ELA L + RL+R G + S RG G G + G
Sbjct: 130 RRAQTQEGRLQVELAQLSHLAGRLIR-------------GYGHLQSQRG-GIG----MKG 171
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR I R + L Q+ +++ RA++R R + G+ T A+VGYTN
Sbjct: 172 PGETKLETDRRLIAHRINALKKQLANLKKQRALRRKPR------ESGGIKTFALVGYTNV 225
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+ + ++ +LFATLD + + + P ++L+DTVGF+SDLP +L+ AF
Sbjct: 226 GKSTLFNCLTKAGAYAQDQLFATLDTTARRLYINPECSIILTDTVGFVSDLPHKLISAFS 285
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEE +AD+L+HV+D +AP E+ V VL+++ I V+NK D
Sbjct: 286 ATLEETAQADVLLHVVDASAPGKEQQIEDVENVLREIKADRIP---CIRVYNKTD 337
>gi|260893470|ref|YP_003239567.1| GTP-binding proten HflX [Ammonifex degensii KC4]
gi|260865611|gb|ACX52717.1| GTP-binding proten HflX [Ammonifex degensii KC4]
Length = 408
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 177/301 (58%), Gaps = 36/301 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGK--PVLDRVGLIIEI 186
GPG + +K + + ++ A+ N LS Q + LE +G V DR +I+EI
Sbjct: 51 LLGPGKITEVKELVE----REKIQAVVFNRELSPRQVQALEDFFGPEVAVWDRTQVILEI 106
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A ++E K+Q ELA L Y RL + G RL G
Sbjct: 107 FRRRAQSREGKIQVELARLTYLYPRLYGLGGTLSRLGGGVGTRG---------------- 150
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
GET+L++ RR + R + L ++EEVR +R + R R+R G + V++VGYT
Sbjct: 151 --PGETKLEVLRRALRRRITELRRELEEVRASRDLLRRHRQRSG------IPVVSLVGYT 202
Query: 307 NAGKSTLVSALSD--SDLFSDARLFATLDPRLKSVVLPSGKV-LLSDTVGFISDLPLQLV 363
NAGKSTL++AL+ ++ ++ RLFATLDP + V+LPSG+V LL+DTVGFI DLP +L
Sbjct: 203 NAGKSTLLNALAGEGKEVLAEDRLFATLDPVSRRVILPSGRVFLLTDTVGFIKDLPPKLK 262
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDY 423
+AF ATLEE+ ADLL+HV+D T+P L+E + V +L+++G++E K +++V+NK+D
Sbjct: 263 EAFKATLEELETADLLLHVIDLTSPYLDEQQRAVESLLEELGLAE---KPILKVYNKVDR 319
Query: 424 H 424
+
Sbjct: 320 Y 320
>gi|354604113|ref|ZP_09022106.1| GTP-binding protein HflX [Alistipes indistinctus YIT 12060]
gi|353348545|gb|EHB92817.1| GTP-binding protein HflX [Alistipes indistinctus YIT 12060]
Length = 401
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 182/333 (54%), Gaps = 32/333 (9%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
TF G G + I ++ + E+D + + LS Q RNL++ + + + DR LI+EIF
Sbjct: 65 TFVGEGKLAEIAAYV----EENEVDFVIFDDELSPSQIRNLDKVFSRKIYDRTSLILEIF 120
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T AK Q ELA Y RL G T E R GG G
Sbjct: 121 AQRATTAYAKTQVELAQCQYLLPRLT------GMWTHLE-----------RQRGGTGTRG 163
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGE E++ RR + +R S L Q++++ + AVQR+ R + L VA+VGYTN
Sbjct: 164 GAGEREIETDRRIVRDRISRLKEQLKKIDKQMAVQRSNRGQ--------LVRVALVGYTN 215
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKST+++ +S S++F++ +LFATLD ++ VVL + LLSDTVGFI LP QLV++F
Sbjct: 216 VGKSTIMNLISKSEVFAENKLFATLDTTVRKVVLDNLPFLLSDTVGFIRKLPHQLVESFK 275
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TL+EV EADLL+HV+D + PN EE V + LQ++G E K + ++NKID +
Sbjct: 276 STLDEVREADLLLHVVDISHPNFEEQIAVVKETLQEIGAGE---KPVFLIFNKIDAYSFI 332
Query: 428 MGDVEYIDGDDISNFSRAEDKDTTSEPVDVECI 460
D + + N + E K++ + CI
Sbjct: 333 QKDEDDLTPATKENMTLDELKNSWIAKANTPCI 365
>gi|325105759|ref|YP_004275413.1| GTP-binding protein HflX [Pedobacter saltans DSM 12145]
gi|324974607|gb|ADY53591.1| GTP-binding protein HflX [Pedobacter saltans DSM 12145]
Length = 410
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 173/320 (54%), Gaps = 43/320 (13%)
Query: 111 HVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLE- 169
HV Q K K TF G G +E IK ++ E +D + + LS +Q RN+E
Sbjct: 55 HVFTQ----KLQKPDRATFVGSGKLEEIKEYVIAEE----IDMVVFDDELSPMQVRNIEN 106
Query: 170 -----RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTF 224
VLDR LI++IF + A T +AK Q ELA L Y RL R+
Sbjct: 107 ELKVKEELTVKVLDRSNLILDIFASRAQTAQAKTQVELAQLQYLLPRLTRMW-------- 158
Query: 225 GETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRA 284
+ R GG G + G GE++++ RR I + + L +++ + + QR
Sbjct: 159 ---------THLERQKGGIG-MRGPGESQIESDRRMINNKVALLKEKLKTIDKQNLTQRK 208
Query: 285 ARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG 344
R+ + VA+VGYTN GKST+++ LS S++F++ +LFATLD ++ VV+ +
Sbjct: 209 NRKE--------MVRVALVGYTNVGKSTIMNMLSKSEVFAENKLFATLDTTVRKVVIENV 260
Query: 345 KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 404
LLSDTVGFI LP LV+ F +TL+E EAD+L+HV+D + PN E+H TV + L+ +
Sbjct: 261 PFLLSDTVGFIRKLPHHLVECFKSTLDETREADILIHVVDISHPNFEDHIRTVNETLKDL 320
Query: 405 GVSEEKLKNMIEVWNKIDYH 424
GV + K I V+NKID +
Sbjct: 321 GVID---KETITVFNKIDAY 337
>gi|406593201|ref|YP_006740380.1| GTP-binding proten HflX [Chlamydia psittaci NJ1]
gi|405789073|gb|AFS27815.1| GTP-binding proten HflX [Chlamydia psittaci NJ1]
Length = 462
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 159/270 (58%), Gaps = 23/270 (8%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+ V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y RL
Sbjct: 103 LIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLPRLK 162
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
R+ G R + G G GF+ G GE +++L RR I ER L ++
Sbjct: 163 RMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTLDLK 209
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLD 333
V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFATLD
Sbjct: 210 SVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFATLD 263
Query: 334 PRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEE 392
P+ + VLPSG +VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P E
Sbjct: 264 PKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPLAFE 323
Query: 393 HRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
H T ++L+++GV K +I V NKID
Sbjct: 324 HIETTKEILKELGVDHPK---IITVLNKID 350
>gi|345869042|ref|ZP_08821005.1| GTP-binding protein HflX [Bizionia argentinensis JUB59]
gi|344046526|gb|EGV42187.1| GTP-binding protein HflX [Bizionia argentinensis JUB59]
Length = 403
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 181/347 (52%), Gaps = 33/347 (9%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
+ N EEQ Y D F V++ + K TF G G +E ++ I
Sbjct: 16 GVVTKNQGEEQSKEYLDELEFLTFTAGGEVIKRFTQKMDIPNPKTFIGTGKMEEVRQFI- 74
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELA 203
E AIF + LS Q+RN+ + VLDR LI++IF A T A+ Q ELA
Sbjct: 75 --EDNDIGTAIFDDE-LSAAQERNISKILECKVLDRTNLILDIFAQRAQTSYARTQVELA 131
Query: 204 ALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILE 263
Y RL G T E R GG G + G GETE++ RR + +
Sbjct: 132 QCEYLLPRL------KGMWTHLE-----------RQRGGIG-MRGPGETEIETDRRIVRD 173
Query: 264 RRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF 323
R S L +I+ + + VQR R + + VA+VGYTN GKSTL++ +S SD+F
Sbjct: 174 RISLLKDKIKVIDKQMGVQRGNRGK--------MVRVALVGYTNVGKSTLMNTISKSDVF 225
Query: 324 SDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVL 383
++ +LFATLD ++ VV+ + LL+DTVGFI LP QLVD+F +TL+EV EADLL+HV+
Sbjct: 226 AEDKLFATLDTTVRKVVIQNLPFLLTDTVGFIRKLPTQLVDSFKSTLDEVREADLLLHVV 285
Query: 384 DCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGD 430
D + N EE +V ++L ++ + K I V+NKID + E D
Sbjct: 286 DISHHNFEEQINSVNKILGEIDSGD---KPTIMVFNKIDAYKAEPYD 329
>gi|163749348|ref|ZP_02156597.1| GTP-binding protein HflX [Shewanella benthica KT99]
gi|161331067|gb|EDQ01993.1| GTP-binding protein HflX [Shewanella benthica KT99]
Length = 430
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 169/305 (55%), Gaps = 35/305 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G + + + E+ + + N LS Q+RN+E VLDR LI++IF
Sbjct: 57 FLGSGKTDELAALVAATEA----NVVIFNHALSPAQERNIEMVCQCRVLDRTALILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RL+R G T R GG G + G
Sbjct: 113 QRARTYEGKLQVELAQLRHMSTRLIR----------GWTHLE-------RQKGGIG-MRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R S + ++ +V + R R AR R TV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRGRMSTINKRLAKVDKQREQSRRARSRSEQP------TVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHA 368
GKSTL ++L+ S++++ +LFATLDP L+ + LP G ++L+DTVGFI LP LV AF +
Sbjct: 209 GKSTLFNSLTVSEVYAADQLFATLDPTLRKLELPDGAIILADTVGFIRHLPHDLVAAFKS 268
Query: 369 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE-------EKLKNMIEVWNKI 421
TL+E EADLL+H++DC N+ ++ V VL+++G E K+ + +V +I
Sbjct: 269 TLQETREADLLLHIVDCHDENMGDNFEQVQLVLKEIGADEIPQLIVCNKIDLLEDVNPRI 328
Query: 422 DYHDE 426
DY+DE
Sbjct: 329 DYNDE 333
>gi|399545793|ref|YP_006559101.1| GTPase HflX [Marinobacter sp. BSs20148]
gi|399161125|gb|AFP31688.1| GTPase HflX [Marinobacter sp. BSs20148]
Length = 432
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 171/299 (57%), Gaps = 32/299 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I+ + A + L N LS Q+RN+ER VLDR G+I++IF
Sbjct: 57 FVGDGKLEEIRAAVAAAGADVVL----FNHSLSPSQERNIERELQCRVLDRTGVILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLQHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + ER + ++E+VRR R R AR R L TV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRERIKSINKRLEKVRRQRDQGRRARVRAD------LPTVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + ++ SD+++ +LFATLDP ++ + LP G V+L+DTVGFI LP +LV++F
Sbjct: 209 GKSTLFNRITSSDVYTADQLFATLDPTMRRLELPDIGAVILADTVGFIRHLPHKLVESFR 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
ATLEE EA LL+HV+DC +++ V VL ++G + +++V+NK D DE
Sbjct: 269 ATLEETNEAALLLHVIDCHDERRDDNIAQVEDVLAEIGADDVP---VLQVFNKTDLLDE 324
>gi|338210554|ref|YP_004654603.1| GTP-binding protein HflX [Runella slithyformis DSM 19594]
gi|336304369|gb|AEI47471.1| GTP-binding proten HflX [Runella slithyformis DSM 19594]
Length = 411
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 165/299 (55%), Gaps = 35/299 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGK-PVLDRVGLIIEI 186
TF G G +E IK + S +D I + L Q RNLE + VLDR LI++I
Sbjct: 59 TFVGKGRLEDIKTFV----SANPVDMIIFDDELIPSQVRNLEAEFKDIKVLDRSLLILDI 114
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A T +AK Q ELA Y RL R+ S R GG G +
Sbjct: 115 FAMRAQTAQAKTQVELAQYQYMYPRLTRMW-----------------SHLSRQKGGVG-M 156
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GE EL+ RR + +R + L ++E++ + +R R R L VA+VGYT
Sbjct: 157 RGPGEKELETDRRIVQDRIAFLKEKLEKIDKQSVTRRKERNR--------LVRVALVGYT 208
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAF 366
N GKSTL+ L+ +D+F++ +LFAT+D ++ VVL + LL+DTVGFI LP +L+++F
Sbjct: 209 NVGKSTLMRRLAKTDVFAENKLFATVDSTVRKVVLDNIPFLLTDTVGFIRKLPTKLIESF 268
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID-YH 424
+TL+EV EAD+L+HV+D + P+ EE V Q L ++G + K I V+NKID YH
Sbjct: 269 KSTLDEVREADVLLHVVDISHPSFEEQIEVVNQTLAEIGAGD---KATIMVFNKIDAYH 324
>gi|443471091|ref|ZP_21061164.1| GTP-binding protein HflX [Pseudomonas pseudoalcaligenes KF707]
gi|442900994|gb|ELS26993.1| GTP-binding protein HflX [Pseudomonas pseudoalcaligenes KF707]
Length = 433
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 171/298 (57%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G V+ + + E+ + + N L+ Q+RNLERA+ VLDR GLI++
Sbjct: 55 AKYLIGSGKVDELHDLVKAEEA----ELVIFNHTLTPSQERNLERAFECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL ++L+ S++++ +LFATLDP L+ + L G ++L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNSLTTSEVYAADQLFATLDPTLRRLELDDLGPIVLADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATLEE ADLL+HV+D P VL VL ++G E L M+EV+NK+D
Sbjct: 267 AFRATLEESANADLLLHVIDAHEPERMAQIEQVLAVLGEIGA--EGLP-MLEVYNKVD 321
>gi|256844098|ref|ZP_05549585.1| GTP-binding protein HflX [Lactobacillus crispatus 125-2-CHN]
gi|293380510|ref|ZP_06626574.1| GTP-binding protein HflX [Lactobacillus crispatus 214-1]
gi|256614003|gb|EEU19205.1| GTP-binding protein HflX [Lactobacillus crispatus 125-2-CHN]
gi|290922944|gb|EFD99882.1| GTP-binding protein HflX [Lactobacillus crispatus 214-1]
Length = 421
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 195/372 (52%), Gaps = 43/372 (11%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKA-RADTFFGPGTVE 136
Q K +A +L +Q Y+ T+ + ++ V S ++ ++ A T+FG G +
Sbjct: 5 QPKKTKAYIAGVNLNDQNFDYYMTELANLTEANNMEVVGQSFQNAESIVAGTYFGVGKIN 64
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
I+ G ++K + +N L+ +Q RNLE+ V+DR LI+EIF + A TK+A
Sbjct: 65 EIRTMAQGLKAK----VLVLNDKLTPVQIRNLEKLTKMRVIDRTELILEIFASRARTKQA 120
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ +LA L Y+ RL E + RG G RG AGE++L+L
Sbjct: 121 KLQVQLARLQYELPRL-------------HPSENNLDQQRGGGFANRG----AGESKLEL 163
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I ++ S + +++ V + +AARR + VA+VGYTNAGKST ++
Sbjct: 164 NRRTIGKQISAIKKELKAVAGQEEI-KAARRNQSR-----IPKVALVGYTNAGKSTTMNG 217
Query: 317 L--------SDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFH 367
L +D ++F LFATLD ++ + L +LSDTVGFIS LP LV++F
Sbjct: 218 LLREFSKEGADKEVFVKNMLFATLDTSVRRIDLKDNFSFILSDTVGFISKLPHNLVESFK 277
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
ATL+E +ADLL++V+D + PN+ + T VL ++GV E MI +NK D D
Sbjct: 278 ATLQETRDADLLINVVDASDPNMVQMIRTTQNVLDEIGVKEIP---MITAYNKADKTDRN 334
Query: 428 MGDVEYIDGDDI 439
+E GDDI
Sbjct: 335 YPQIE---GDDI 343
>gi|338814528|ref|ZP_08626542.1| GTP-binding protein [Acetonema longum DSM 6540]
gi|337273464|gb|EGO62087.1| GTP-binding protein [Acetonema longum DSM 6540]
Length = 619
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 174/301 (57%), Gaps = 32/301 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K A F G G V+ I+ I E+ D + ++ L+ QQRNLE+ V+DR L
Sbjct: 237 KPDAAFFLGKGKVDEIQHLIQETEA----DVLVLDDELTPAQQRNLEQYLKIKVIDRTAL 292
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A + E KLQ ELA L Y RL +G+ V+S G G G
Sbjct: 293 ILDIFAQRARSYEGKLQVELAQLRYNLPRL--------------SGQGLVLSRLGGGIGT 338
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G GET+L++ +RRI R + +IE V+ RA+QR R++ + +V +
Sbjct: 339 ----RGPGETKLEMDKRRIRSRIHDVEKEIETVKANRALQRIRRKKSS------IPSVVL 388
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQ 361
+GYTNAGKSTL+++LS++ + ++ +LFATLDP ++V L +G+ +LL+DTVGFI LP
Sbjct: 389 IGYTNAGKSTLLNSLSEAGVLAEDKLFATLDPTTRNVKLSNGQEILLTDTVGFIQKLPHH 448
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEEV +ADLL+HVLD + P V VL+++ E K++I V NK+
Sbjct: 449 LVAAFRATLEEVKQADLLLHVLDISHPRFRAQSDAVFHVLREL---ESDSKDIITVCNKV 505
Query: 422 D 422
D
Sbjct: 506 D 506
>gi|104783871|ref|YP_610369.1| hypothetical protein PSEEN4942 [Pseudomonas entomophila L48]
gi|95112858|emb|CAK17586.1| conserved hypothetical protein HflX [Pseudomonas entomophila L48]
Length = 433
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 175/298 (58%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE ++ + AE+ D + N L+ Q+RNLER + VLDR GLI++
Sbjct: 55 AKFLIGSGKVEELRDLVKSAEA----DLVIFNHTLTPSQERNLERVFECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + +++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRLRQIKARLEKVRSQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL+ S++++ +LFATLDP L+ + L G ++L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTQSEVYAADQLFATLDPTLRRLELADLGPIVLADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATLEE +DLL+HV+D P+ E VL VL ++G E L ++EV+NK+D
Sbjct: 267 AFRATLEESSNSDLLLHVIDAHEPDRMEQIEQVLAVLGEIGA--ESLP-ILEVYNKLD 321
>gi|302392990|ref|YP_003828810.1| GTP-binding proten HflX [Acetohalobium arabaticum DSM 5501]
gi|302205067|gb|ADL13745.1| GTP-binding proten HflX [Acetohalobium arabaticum DSM 5501]
Length = 606
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 174/295 (58%), Gaps = 35/295 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G V+ +K + + ++ I + LS QQRNLE G V+DR +I++IF
Sbjct: 242 YIGYGKVQELK----ELKYRLGINVIIFDEELSPAQQRNLEDELGVKVIDRTEVILDIFA 297
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA++KE KLQ ELA L Y RL TG+ E +S G G RG
Sbjct: 298 QHANSKEGKLQVELAQLHYLLPRL--------------TGKGEDLSRLAGGIGTRG---- 339
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L++ RRRI +R +L ++I V++TRA QR+ R+ L T+++VGYTNA
Sbjct: 340 PGESKLEIDRRRIRKRIDNLEAEINRVQQTRATQRSRRK---------LPTISLVGYTNA 390
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ L+++ + LFATLD + LP G KVL+SDTVGFI LP QL+ AF
Sbjct: 391 GKSTLLNRLTEATAVTKDELFATLDSNTCRLKLPVGRKVLISDTVGFIRKLPHQLIAAFR 450
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEEV EAD+L+HV+D T + + V++VL ++ V + K +I + NKID
Sbjct: 451 ATLEEVTEADILLHVVDVTEADYKAKMDAVVEVLSELNVLD---KPIITILNKID 502
>gi|300774677|ref|ZP_07084540.1| GTP-binding protein HflX [Chryseobacterium gleum ATCC 35910]
gi|300506492|gb|EFK37627.1| GTP-binding protein HflX [Chryseobacterium gleum ATCC 35910]
Length = 407
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 175/325 (53%), Gaps = 33/325 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
+ TF G G IK ++ + E+ + + LS Q +NLER +LDR LI++
Sbjct: 58 SKTFIGSGKAIEIKEYV----KENEIGTVIFDDELSPSQLKNLEREMEVKILDRTNLILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T A+ Q ELA Y RL R+ + R GG G
Sbjct: 114 IFAQRAQTSYARTQVELAQYQYLLPRLTRMW-----------------THLERQKGGIG- 155
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GETE++ RR I +R + L +++ + + A QR R + + A+VGY
Sbjct: 156 MRGPGETEIETDRRIIRDRITLLKDKLKTIDKQMATQRNNRGK--------VVRAALVGY 207
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDA 365
TN GKSTL++++S S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP QLV++
Sbjct: 208 TNVGKSTLMNSISKSEVFAENKLFATLDTTVRKVVIGNLPFLLTDTVGFIRKLPTQLVES 267
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
F +TL+EV EADLL+HV+D + + E+H +V +L ++ + K MI V+NKID
Sbjct: 268 FKSTLDEVREADLLIHVVDISHESFEDHIESVNHILMEINAHQ---KPMIMVFNKIDDFS 324
Query: 426 EEMGDVEYIDGDDISNFSRAEDKDT 450
E D + + N S E K T
Sbjct: 325 YEKKDEDDLTPSTRKNISLEEWKKT 349
>gi|392964199|ref|ZP_10329620.1| GTP-binding proten HflX [Fibrisoma limi BUZ 3]
gi|387847094|emb|CCH51664.1| GTP-binding proten HflX [Fibrisoma limi BUZ 3]
Length = 416
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 180/340 (52%), Gaps = 34/340 (10%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHIN 143
AL +Q Y D F E V+ K + TF G G +E I+ +I
Sbjct: 15 ALVTQKQTADQTKEYLDELAFLAETSGIRTVKTFVQKLERPDTRTFVGKGKLEEIQTYI- 73
Query: 144 GAESKGELDAIFVNAILSGIQQRNLERAWGK-PVLDRVGLIIEIFNAHAHTKEAKLQAEL 202
+ +D I + L+ Q RNLE + + VLDR LI+ IF+ A T +A++Q EL
Sbjct: 74 ---TDNPVDTIIFDDDLTPAQVRNLEGEFKEIKVLDRSLLILNIFSMRAQTAQARVQVEL 130
Query: 203 AALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRIL 262
A Y RL R+ + R GG G + G GE+EL+ RR +
Sbjct: 131 AQYQYLYPRLTRMW-----------------THLSRQKGGVG-MRGPGESELETDRRIVK 172
Query: 263 ERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDL 322
+R + L ++E++ + +R R R LA VA+VGYTN GKSTL+ L+ +++
Sbjct: 173 DRIAFLKEKLEKIDKQSQTRRKERDR--------LARVALVGYTNVGKSTLMRTLAKAEV 224
Query: 323 FSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHV 382
F++ +LFAT+D ++ VVL + LL+DTVGFI LP L+++F +TL+EV EAD+L+HV
Sbjct: 225 FAENKLFATVDSTVRKVVLGNIPFLLTDTVGFIRKLPTTLIESFKSTLDEVREADILLHV 284
Query: 383 LDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+D + P+ EEH V L +G ++ K I V+NKID
Sbjct: 285 VDVSHPSFEEHIEVVSSTLSDIGAAD---KPTILVFNKID 321
>gi|334136023|ref|ZP_08509502.1| GTP-binding protein HflX [Paenibacillus sp. HGF7]
gi|333606636|gb|EGL17971.1| GTP-binding protein HflX [Paenibacillus sp. HGF7]
Length = 430
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 176/318 (55%), Gaps = 51/318 (16%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
K ++ + G G +E + + E+ G D + N L+ Q RNLE A + V+DR
Sbjct: 46 KLARSNPSHYIGKGKIEEL---LELIETHGA-DLVICNDELTPSQLRNLEAALNRTVMDR 101
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI+ IF A T+EA+LQ E+A L Y RLV +R GR +G G
Sbjct: 102 TALILAIFAERARTREAQLQVEVARLHYMLPRLVGLRESLGR--------------QGGG 147
Query: 240 SGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLAT 299
SG + GAGET+L+L RRRI ER L ++E++ R QR RR+ +
Sbjct: 148 SGLKN--RGAGETKLELDRRRIEERIVMLQKELEQLVSHRQTQRKKRRK------TEVPV 199
Query: 300 VAVVGYTNAGKSTLVSALSDS-------DLFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
V +VGYTNAGKS+L++A+ ++ + ++ RLFATL+ ++S+ L G+ LL+DT
Sbjct: 200 VCLVGYTNAGKSSLMNAMMEAHNPGPGKQVMAEDRLFATLETSVRSIRLQDGRSFLLTDT 259
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+S LP LV AF +TLEEV EADLL+HV+D ++P E +Q+ V+EE L
Sbjct: 260 VGFVSQLPHHLVKAFRSTLEEVAEADLLLHVVDSSSPVYE----------RQMAVTEETL 309
Query: 412 KNM-------IEVWNKID 422
K + + V+NK D
Sbjct: 310 KELGADHIPKLLVYNKAD 327
>gi|410858244|ref|YP_006974184.1| putative GTP-binding protein [Chlamydia psittaci 01DC12]
gi|410811139|emb|CCO01783.1| putative GTP-binding protein [Chlamydia psittaci 01DC12]
Length = 462
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 160/273 (58%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLPSG +VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T ++L+++GV K +I V NKID
Sbjct: 321 AFEHIETTKEILKELGVDHPK---IITVLNKID 350
>gi|404378480|ref|ZP_10983571.1| GTP-binding protein HflX [Simonsiella muelleri ATCC 29453]
gi|404295037|gb|EFG31291.2| GTP-binding protein HflX [Simonsiella muelleri ATCC 29453]
Length = 378
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 176/311 (56%), Gaps = 32/311 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
++ + + K KA F G G E + + + +++ + N LS Q+RNLE+A
Sbjct: 56 LIAHETAKREKAHTALFVGTGKAEELAKLVE----QNQIELVIFNHELSPTQERNLEKAL 111
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
VLDRVGLI+ IF A ++E KLQ ELA L + SRLVR G +
Sbjct: 112 QCRVLDRVGLILAIFAQRAQSQEGKLQVELAQLSHLSSRLVR-------------GYKHL 158
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
S +G G G + G GET+L+ RR I + + L Q++ V++ R +R AR GS
Sbjct: 159 QSQKG-GIG----LKGPGETQLETDRRLIQNKINFLKKQLDNVKKQRETRRKARL--SGS 211
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVL-PSGKVLLSDT 351
L T A+VGYTNAGKSTL + L+ +D+F+ +LFATLD + + L P ++L+DT
Sbjct: 212 ----LKTFAIVGYTNAGKSTLFNRLTKADVFAQDQLFATLDTTARRLYLNPETSIILTDT 267
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+ +LP +LV AF ATLEE AD+L+HV+D + P E V VL++ + +K+
Sbjct: 268 VGFVQNLPHKLVSAFAATLEETALADVLLHVVDASDPEYERKIQDVNHVLRE--IKADKI 325
Query: 412 KNMIEVWNKID 422
++ ++NK D
Sbjct: 326 PQLV-IYNKQD 335
>gi|157963353|ref|YP_001503387.1| small GTP-binding protein [Shewanella pealeana ATCC 700345]
gi|157848353|gb|ABV88852.1| small GTP-binding protein [Shewanella pealeana ATCC 700345]
Length = 431
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 181/324 (55%), Gaps = 34/324 (10%)
Query: 115 QNPSLKSGKARA---DTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERA 171
Q+ + SG R+ F G G E + + ++ + + N LS Q+RNLE+
Sbjct: 40 QSIGVISGSRRSPDRKYFVGSGKAEELAAMVAATDA----NVVIFNHKLSPAQERNLEKI 95
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
VLDR LI++IF A T E KLQ ELA L + +RL+R G T
Sbjct: 96 CECRVLDRTTLILDIFAQRARTFEGKLQVELAQLRHMSTRLIR----------GWTHLE- 144
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
R GG G + G GET+L+ RR + R + ++E+V + R R AR+R
Sbjct: 145 ------RQKGGIG-LRGPGETQLETDRRLLRGRIRTINRRLEKVDKQRDQSRRARQR--- 194
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDT 351
SD ++TV++VGYTNAGKSTL + L+ SD+++ +LFATLDP L+ + LP G V+L+DT
Sbjct: 195 SD---MSTVSLVGYTNAGKSTLFNGLTTSDVYAADQLFATLDPTLRKLELPDGDVILADT 251
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFI LP LV AF ATL+E +ADLL+HV+D + ++ V +VL+++ + +
Sbjct: 252 VGFIRHLPHDLVAAFKATLQETRQADLLLHVVDSADEKMADNFEQVQKVLKEIDAID--I 309
Query: 412 KNMIEVWNKIDYHDEEMGDVEYID 435
+I V NKID DE ++Y D
Sbjct: 310 PQLI-VCNKIDLLDEVKPRIDYDD 332
>gi|440533331|emb|CCP58841.1| GTPase HflX [Chlamydia trachomatis Ia/SotonIa1]
gi|440534225|emb|CCP59735.1| GTPase HflX [Chlamydia trachomatis Ia/SotonIa3]
Length = 447
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 162/273 (59%), Gaps = 24/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D + + +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYVENKLFA 259
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLP G +VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T +LQ++G+++ + +I V NKID
Sbjct: 320 ALEHVETTKAILQELGITQPQ---VITVLNKID 349
>gi|359798961|ref|ZP_09301530.1| GTP-binding proten HflX [Achromobacter arsenitoxydans SY8]
gi|359363099|gb|EHK64827.1| GTP-binding proten HflX [Achromobacter arsenitoxydans SY8]
Length = 368
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 159/272 (58%), Gaps = 28/272 (10%)
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D + + LS QQRNLERA+ V+DRV LI++IF A + E KLQ ELA L + +R
Sbjct: 68 DIVLFDQPLSPAQQRNLERAFNLRVVDRVALILDIFALRAKSHEGKLQVELAQLQHLATR 127
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L R+ S R GG G + G GE++L++ RR I + L +
Sbjct: 128 LTRM-----------------WSHLERQRGGIG-MRGPGESQLEMDRRMIGAKVKTLRER 169
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
+++V R R QR AR R G +V++VGYTNAGKSTL +AL+ +D ++ +LFAT
Sbjct: 170 LDKVERQRVTQRRARARGGA------LSVSLVGYTNAGKSTLFNALTRADAYAADQLFAT 223
Query: 332 LDPRLKSV-VLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
LD + + V +G V++SDTVGFI DLP L+ AF ATLEE V ADLL+HV+D +P
Sbjct: 224 LDTTTRRIWVEGAGSVVVSDTVGFIRDLPHGLIAAFRATLEETVHADLLLHVVDAASPQR 283
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+E V +VL ++G + I V+NKID
Sbjct: 284 DEQIFEVNKVLAEIGAAAIP---TILVYNKID 312
>gi|255311185|ref|ZP_05353755.1| GTP binding protein [Chlamydia trachomatis 6276]
gi|255317486|ref|ZP_05358732.1| GTP binding protein [Chlamydia trachomatis 6276s]
gi|440525297|emb|CCP50548.1| GTPase HflX [Chlamydia trachomatis K/SotonK1]
Length = 447
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 162/273 (59%), Gaps = 24/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D + + +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYVENKLFA 259
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLP G +VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T +LQ++G+++ + +I V NKID
Sbjct: 320 ALEHVETTKAILQELGITQPQ---VITVLNKID 349
>gi|407455093|ref|YP_006733984.1| GTP-binding proten HflX [Chlamydia psittaci GR9]
gi|407457827|ref|YP_006736132.1| GTP-binding proten HflX [Chlamydia psittaci WS/RT/E30]
gi|405781636|gb|AFS20385.1| GTP-binding proten HflX [Chlamydia psittaci GR9]
gi|405785403|gb|AFS24149.1| GTP-binding proten HflX [Chlamydia psittaci WS/RT/E30]
Length = 462
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 160/273 (58%), Gaps = 23/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + V+ ++ QQRNLE+ G VLDR LI+EIF A T EA LQ ELA Y
Sbjct: 100 IGTLIVDEEITASQQRNLEKRLGLVVLDRTELILEIFANRAFTAEAGLQVELARARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G R + G G GF+ G GE +++L RR I ER L
Sbjct: 160 RLKRMWGHLSR-------------QKSGGGSGGGFVKGEGEKQIELDRRMIRERIHKLTL 206
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V + R +R A+ + RG+ + A++GYTN+GKSTL++ L+ ++ + + +LFA
Sbjct: 207 DLKSVEKQRKERRKAKEK------RGIPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFA 260
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLPSG +VL++DTVGFI LP LV AF +TLE + D+L+HV+D + P
Sbjct: 261 TLDPKTRRCVLPSGQRVLVTDTVGFIRKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPL 320
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T ++L+++GV K +I V NKID
Sbjct: 321 AFEHIETTKEILKELGVDHPK---IITVLNKID 350
>gi|94971366|ref|YP_593414.1| HSR1-like GTP-binding protein [Candidatus Koribacter versatilis
Ellin345]
gi|94553416|gb|ABF43340.1| GTP-binding protein, HSR1-related protein [Candidatus Koribacter
versatilis Ellin345]
Length = 451
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/306 (41%), Positives = 167/306 (54%), Gaps = 52/306 (16%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E + GA + + D + + LS QQRN+ERA V+DR LI++IF
Sbjct: 91 TLIGSGKLE----ELQGAVAASDADLVIFDHDLSPSQQRNIERALEARVIDRTQLILDIF 146
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF-- 245
HA T E +LQ ELA L Y RL GGRG
Sbjct: 147 AKHARTAEGQLQVELAQLQYLLPRL----------------------------GGRGIEM 178
Query: 246 --------ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
G GET+L+ RR+I R H+ Q+E+VRR R QRA + +
Sbjct: 179 SQLGGGIGTRGPGETQLETDRRKINRRIRHVQKQLEDVRRIRRQQRAR------RENVPV 232
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
A VA+VGYTNAGKSTL +AL+ + +++ +++FATLDP L+ V+LPS + VLLSDTVGFI
Sbjct: 233 AVVALVGYTNAGKSTLFNALTKAGVYASSKMFATLDPTLRGVMLPSKRQVLLSDTVGFIR 292
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
+LP LV AF ATLEEV A LL+HV D T+P E + V VL ++ V + K I
Sbjct: 293 NLPTTLVSAFRATLEEVQRAALLLHVADATSPVALEQQRQVEDVLGELEVQD---KPQIH 349
Query: 417 VWNKID 422
V NKID
Sbjct: 350 VMNKID 355
>gi|421618272|ref|ZP_16059250.1| GTP-binding protein HflX [Pseudomonas stutzeri KOS6]
gi|409779826|gb|EKN59477.1| GTP-binding protein HflX [Pseudomonas stutzeri KOS6]
Length = 433
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 171/301 (56%), Gaps = 32/301 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE ++ + +GE++ + N L+ Q+RNLER VLDR GLI++
Sbjct: 55 AKFLIGSGKVEELRDLVK----EGEVELVIFNHTLTPSQERNLERVLECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++E+VR R R + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKQRLEKVRGQREQARRG------RRRADIPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL++SD+++ +LFATLDP L+ + L G V+L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTESDVYAANQLFATLDPTLRRLELDDVGPVILADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+F ATLEE ADLL+HV+D P ++ VL VL ++G +E M+EV+NK+D
Sbjct: 267 SFRATLEESSNADLLLHVIDAHEPERDQQIEQVLAVLAEIGANE---LPMLEVYNKVDLM 323
Query: 425 D 425
+
Sbjct: 324 E 324
>gi|402817023|ref|ZP_10866612.1| GTPase HflX [Paenibacillus alvei DSM 29]
gi|402505129|gb|EJW15655.1| GTPase HflX [Paenibacillus alvei DSM 29]
Length = 428
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 170/295 (57%), Gaps = 32/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G V+ ++ I+ G AIF + LSG Q RNLE A ++DR LI++IF
Sbjct: 67 FIGKGKVQELRGVID---ELGATTAIF-DQELSGAQVRNLEEALDVKIVDRTQLILDIFA 122
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T+E +Q ELA L Y RL +G + +S +G G G G
Sbjct: 123 QRAKTREGIIQVELAQLSYLLPRL--------------SGHGKNLSRQGGGIGT----RG 164
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE++L+ RR I R S L Q+ EV R+R + R R++ G VA+VGYTNA
Sbjct: 165 PGESQLETDRRHIRGRISDLKRQLHEVVRSRNLHRERRKKTGAYQ------VALVGYTNA 218
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL+ L+ +D++ + +LFATLDP + LPSGK V+L+DTVGFI +LP LV AF
Sbjct: 219 GKSTLLRQLTQADVYVENQLFATLDPTSRQWELPSGKEVVLTDTVGFIQNLPHDLVAAFR 278
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEEV EADL++HV+D ++P E+H V +LQQ+G K I ++NK D
Sbjct: 279 ATLEEVNEADLILHVMDASSPMREDHMRVVEDILQQLGAGA---KPQIVLYNKKD 330
>gi|339449207|ref|ZP_08652763.1| GTP-binding proten HflX [Lactobacillus fructivorans KCTC 3543]
Length = 421
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 168/303 (55%), Gaps = 36/303 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE ++ + E+ D I N LS Q RNLE+ ++DR GLI+EIF
Sbjct: 53 TYFGKGKVEFLEQLVKTTET----DVIVANDELSPSQIRNLEKLTNAKIIDRTGLILEIF 108
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A ++EAKLQ +LA L Y+ RL T ++ + + G G
Sbjct: 109 ANRARSREAKLQVQLAKLNYQLPRL-------------RTSASQRLDQQSAGGGLAN--R 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGET+++L RR I + +H+ +++E+ ++ Q R+++ L T+A+VGYTN
Sbjct: 154 GAGETQIELNRRTIQHQINHVRHELKEIDKSYDTQSKKRKQND------LKTIALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKST+++ L D ++ LFATLD ++ + LP+ K L +DTVGF+S LP
Sbjct: 208 AGKSTIMNQLVKRFGENEDKEVTVKNMLFATLDTSVRKIELPNHKRFLATDTVGFVSQLP 267
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
QL+ AF +TL E ADLL+ V+D + PN E T L+++GV + MI+V+N
Sbjct: 268 HQLIQAFKSTLAEAANADLLIQVVDYSDPNQELMMQTTEATLKEIGVPDIP---MIKVFN 324
Query: 420 KID 422
K D
Sbjct: 325 KAD 327
>gi|384449261|ref|YP_005661863.1| putative phage virion morphogenesis protein/GTP binding protein
[Chlamydophila pneumoniae LPCoLN]
gi|269303355|gb|ACZ33455.1| putative phage virion morphogenesis protein/GTP binding protein
[Chlamydophila pneumoniae LPCoLN]
Length = 472
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 155/260 (59%), Gaps = 24/260 (9%)
Query: 164 QQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLT 223
QQRNLE+ G VLDR LI+EIF++ A T EA +Q +LA Y RL R+ G
Sbjct: 116 QQRNLEKRLGLVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKRLWGH----- 170
Query: 224 FGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQR 283
+S + G G GF+ G GE +++L RR + ER L +Q++ V + RA +R
Sbjct: 171 ---------LSRQKSGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERR 221
Query: 284 AARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS 343
+ R RG+ T A++GYTN+GKSTL++ L+ +D + + +LFATLDP+ + VLP
Sbjct: 222 KVKSR------RGIPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPG 275
Query: 344 GK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ 402
G+ VLL+DTVGFI LP LV AF +TLE D+L+HV+D + P EH T + Q
Sbjct: 276 GRHVLLTDTVGFIRKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQ 335
Query: 403 QVGVSEEKLKNMIEVWNKID 422
++ + + + +I V NK+D
Sbjct: 336 ELKIEKPR---IITVLNKVD 352
>gi|238917198|ref|YP_002930715.1| GTP-binding protein HflX [Eubacterium eligens ATCC 27750]
gi|238872558|gb|ACR72268.1| GTP-binding protein HflX [Eubacterium eligens ATCC 27750]
Length = 413
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 169/298 (56%), Gaps = 36/298 (12%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G +E ++ I+ ELDA I + LS Q +NLE G V+DR +I++
Sbjct: 59 TYIGKGKIEELRLMID------ELDATGIICDDELSPAQFKNLEDELGIKVMDRTMVILD 112
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A A + E K+Q E+A L Y+ RL RL G
Sbjct: 113 IFAARATSSEGKIQVEMAQLKYRSIRLAGFGTSMSRLGGGIGTRG--------------- 157
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +++ RR I +R S L + +++++ R VQR+ R + S A+VGY
Sbjct: 158 ---PGEKKIETDRRLIRDRISKLSADLKDMKEHRDVQRSKRAKTSTS------VAAIVGY 208
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVD 364
TNAGKSTL++ L+D+ + S+ +LFATLDP +S+ LP+G KVLL+DTVGFI LP L++
Sbjct: 209 TNAGKSTLLNKLTDAGVLSEDKLFATLDPTTRSMELPNGEKVLLTDTVGFIRKLPHNLIE 268
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF +TLEE AD++VHV+D + P+ E+ +TV L+Q+GV K ++ ++NK D
Sbjct: 269 AFKSTLEEAKYADIIVHVVDVSNPDYEQQMSTVYATLKQLGVEG---KPVVTLFNKCD 323
>gi|336451944|ref|ZP_08622378.1| GTP-binding protein HflX [Idiomarina sp. A28L]
gi|336281277|gb|EGN74560.1| GTP-binding protein HflX [Idiomarina sp. A28L]
Length = 427
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 170/298 (57%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G E + + E+ G IF N LS Q+RN+ER VLDR GLI++
Sbjct: 54 ARLFIGSGKTEEVAAMV---EATGAEIVIF-NHSLSPSQERNIEREVKCRVLDRTGLILD 109
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RL+R G T R GG G
Sbjct: 110 IFAQRARTHEGKLQVELAQLRHISTRLIR----------GWTHLE-------RQKGGIG- 151
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR I R ++L+++E+V + R R +R+R + T+A+VGY
Sbjct: 152 LRGPGETQLETDRRLIRGRIKNILARLEKVSKQREQGRRSRQRAE------IPTIALVGY 205
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+DSD+++ +LFATLDP L+ LP G ++ +DTVGFI LP LV
Sbjct: 206 TNAGKSTLFNRLTDSDVYAADQLFATLDPTLRKYELPDVGSLIFADTVGFIRHLPHDLVA 265
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATL+E +A+LL+HV+DC + +++ V +VL ++ SE + V NK+D
Sbjct: 266 AFKATLQETRDAELLLHVMDCHDERMLDNQHEVDKVLTEIAASE---VPQLLVMNKLD 320
>gi|385241750|ref|YP_005809590.1| putative nucleotide-binding protein [Chlamydia trachomatis E/11023]
gi|385245357|ref|YP_005814180.1| putative nucleotide-binding protein [Chlamydia trachomatis E/150]
gi|386262732|ref|YP_005816011.1| putative nucleotide-binding protein [Chlamydia trachomatis Sweden2]
gi|389858947|ref|YP_006361188.1| nucleotide-binding protein [Chlamydia trachomatis E/SW3]
gi|289525420|emb|CBJ14897.1| putative nucleotide-binding protein [Chlamydia trachomatis Sweden2]
gi|296434973|gb|ADH17151.1| putative nucleotide-binding protein [Chlamydia trachomatis E/150]
gi|296438693|gb|ADH20846.1| putative nucleotide-binding protein [Chlamydia trachomatis E/11023]
gi|380250896|emb|CCE12657.1| putative nucleotide-binding protein [Chlamydia trachomatis E/SW3]
gi|440529756|emb|CCP55240.1| GTPase HflX [Chlamydia trachomatis E/SotonE4]
gi|440530655|emb|CCP56139.1| GTPase HflX [Chlamydia trachomatis E/SotonE8]
gi|440535123|emb|CCP60633.1| GTPase HflX [Chlamydia trachomatis E/Bour]
gi|440536901|emb|CCP62415.1| GTPase HflX [Chlamydia trachomatis L1/440/LN]
gi|440538681|emb|CCP64195.1| GTPase HflX [Chlamydia trachomatis L1/115]
gi|440539570|emb|CCP65084.1| GTPase HflX [Chlamydia trachomatis L1/224]
gi|440541350|emb|CCP66864.1| GTPase HflX [Chlamydia trachomatis L3/404/LN]
Length = 447
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 163/273 (59%), Gaps = 24/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D +++ +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFA 259
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLP G +VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T +LQ++G+++ + +I V NK+D
Sbjct: 320 ALEHVETTKAILQELGITQPQ---VITVLNKMD 349
>gi|15618389|ref|NP_224674.1| GTP binding protein [Chlamydophila pneumoniae CWL029]
gi|15836009|ref|NP_300533.1| GTP binding protein [Chlamydophila pneumoniae J138]
gi|81790065|sp|Q9Z873.1|HFLX_CHLPN RecName: Full=GTPase HflX; AltName: Full=GTP-binding protein HflX
gi|4376763|gb|AAD18618.1| GTP Binding Protein [Chlamydophila pneumoniae CWL029]
gi|8978848|dbj|BAA98684.1| GTP binding protein [Chlamydophila pneumoniae J138]
Length = 472
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 155/260 (59%), Gaps = 24/260 (9%)
Query: 164 QQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLT 223
QQRNLE+ G VLDR LI+EIF++ A T EA +Q +LA Y RL R+ G
Sbjct: 116 QQRNLEKRLGLVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKRLWGH----- 170
Query: 224 FGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQR 283
+S + G G GF+ G GE +++L RR + ER L +Q++ V + RA +R
Sbjct: 171 ---------LSRQKSGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERR 221
Query: 284 AARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS 343
+ R RG+ T A++GYTN+GKSTL++ L+ +D + + +LFATLDP+ + VLP
Sbjct: 222 KVKSR------RGIPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPG 275
Query: 344 GK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ 402
G+ VLL+DTVGFI LP LV AF +TLE D+L+HV+D + P EH T + Q
Sbjct: 276 GRHVLLTDTVGFIRKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQ 335
Query: 403 QVGVSEEKLKNMIEVWNKID 422
++ + + + +I V NK+D
Sbjct: 336 ELKIEKPR---IITVLNKVD 352
>gi|261856598|ref|YP_003263881.1| GTP-binding proten HflX [Halothiobacillus neapolitanus c2]
gi|261837067|gb|ACX96834.1| GTP-binding proten HflX [Halothiobacillus neapolitanus c2]
Length = 440
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 176/312 (56%), Gaps = 31/312 (9%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G E + + E+ D + VNA LS Q+RNLE VLDR GLI++IF+
Sbjct: 59 YIGKGKAEELADLVKSTEA----DLVVVNAQLSPSQERNLESVLHCRVLDRTGLILDIFS 114
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + +RLVR G + RG GS G + G
Sbjct: 115 QRARSHEGKLQVELAQLKHLSTRLVR-------------GWTHLERQRG-GSIG---LRG 157
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I +R L +I +VRR R R R++ + V++VGYTNA
Sbjct: 158 PGETQLEMDRRLIHDRIKQLQDRIAKVRRQRQEGRKTRQKSQ------VPMVSLVGYTNA 211
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL +AL+++ F+ +LFATLD L+ + G+ ++L+DTVGFI LP +LV AF
Sbjct: 212 GKSTLFNALTEAGTFAADQLFATLDTTLRRLEFAPGEPMVLADTVGFIRHLPHELVTAFR 271
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+TLEE +EADLL+HV+D +P + T V VL+++G + L + V NKID ++
Sbjct: 272 STLEETLEADLLIHVVDAASPERDRQMTDVEVVLKEIGA--DTLPRLT-VMNKIDQLEDR 328
Query: 428 MGDVEYIDGDDI 439
++ + +I
Sbjct: 329 APEISRNEAGEI 340
>gi|343926997|ref|ZP_08766485.1| GTP-binding protein HflX [Gordonia alkanivorans NBRC 16433]
gi|343763055|dbj|GAA13411.1| GTP-binding protein HflX [Gordonia alkanivorans NBRC 16433]
Length = 485
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 172/304 (56%), Gaps = 31/304 (10%)
Query: 128 TFFGPGTVETIKCHI--NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G E ++ + GA D + + L+ Q LE+ V+DR LI++
Sbjct: 113 TYIGSGKAEELREIVLATGA------DTVICDGELTPAQLTALEKVVKVKVIDRTALILD 166
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGR-GSGGRG 244
IF HA ++E K Q LA + Y L R+RG GE+ A GR GS G
Sbjct: 167 IFAQHATSREGKAQVSLAQMEYM---LPRLRG---------WGESMSRQAGGRAGSNGGV 214
Query: 245 FISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVG 304
+ G GET+++ RRRI ER + L +I ++++ R +RAAR R + ++ V G
Sbjct: 215 GLRGPGETKIETDRRRIRERMAKLRREIRDMKKARTTKRAARNRSA------IPSITVAG 268
Query: 305 YTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLV 363
YTNAGKS+LV+A++ + + LFATLDP + L G+ V+ +DTVGF+ LP QLV
Sbjct: 269 YTNAGKSSLVNAMTGAGVLVQDALFATLDPTTRRATLDDGRAVVFTDTVGFVRHLPTQLV 328
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE--VWNKI 421
+AF +TLEEVV+ADLL+HV+D + P E + V QV+ +V V+EEK + E V NKI
Sbjct: 329 EAFRSTLEEVVDADLLLHVVDGSDPFPMEQISAVRQVISEV-VAEEKAEAPPELLVINKI 387
Query: 422 DYHD 425
D D
Sbjct: 388 DAID 391
>gi|89889837|ref|ZP_01201348.1| GTP-binding protein, HflX [Flavobacteria bacterium BBFL7]
gi|89518110|gb|EAS20766.1| GTP-binding protein, HflX [Flavobacteria bacterium BBFL7]
Length = 408
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 184/341 (53%), Gaps = 33/341 (9%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGEL 151
EE+ Y D F + + S K K TF G G +E IK +++ +
Sbjct: 24 EEKLTEYLDELEFLAYTAGATIHKRFSQKMQKPNPKTFLGSGKMEDIKAYVDA----HNI 79
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D + + LS QQ+N+E+ ++DR LI++IF A T A+ Q ELA Y R
Sbjct: 80 DTVIFDDELSPAQQKNIEKILEVKIIDRTYLILDIFAQRAETSYARTQVELAQYEYLLPR 139
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
LV G T E R GG G + G GETE++ RR + +R + L +
Sbjct: 140 LV------GLWTHLE-----------RQKGGIG-MRGPGETEIETDRRIVRDRITLLKKK 181
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
+ + + A QR G+ G+ + VA+VGYTN GKSTL++ +S S++F++ +LFAT
Sbjct: 182 LLTIDKQMATQR-------GNRGK-MVRVALVGYTNVGKSTLMNVISKSEVFAENKLFAT 233
Query: 332 LDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLE 391
LD ++ VV+ + LL+DTVGFI LP QLV++F +TL+EV E+DLL+HV+D + E
Sbjct: 234 LDTTVRKVVVKNLPFLLTDTVGFIRKLPTQLVESFKSTLDEVRESDLLLHVVDIAHGSFE 293
Query: 392 EHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVE 432
+H +V ++L ++ + K I V+NKID + E D E
Sbjct: 294 DHIASVNKILSEIDAVD---KPTIMVFNKIDQYVAEDYDPE 331
>gi|33241830|ref|NP_876771.1| GTP binding protein hflX [Chlamydophila pneumoniae TW-183]
gi|33236339|gb|AAP98428.1| GTP binding protein hflX [Chlamydophila pneumoniae TW-183]
Length = 472
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 155/260 (59%), Gaps = 24/260 (9%)
Query: 164 QQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLT 223
QQRNLE+ G VLDR LI+EIF++ A T EA +Q +LA Y RL R+ G
Sbjct: 116 QQRNLEKRLGLVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKRLWGH----- 170
Query: 224 FGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQR 283
+S + G G GF+ G GE +++L RR + ER L +Q++ V + RA +R
Sbjct: 171 ---------LSRQKSGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERR 221
Query: 284 AARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS 343
+ R RG+ T A++GYTN+GKSTL++ L+ +D + + +LFATLDP+ + VLP
Sbjct: 222 KVKSR------RGIPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPG 275
Query: 344 GK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ 402
G+ VLL+DTVGFI LP LV AF +TLE D+L+HV+D + P EH T + Q
Sbjct: 276 GRHVLLTDTVGFIRKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQ 335
Query: 403 QVGVSEEKLKNMIEVWNKID 422
++ + + + +I V NK+D
Sbjct: 336 ELKIEKPR---IITVLNKVD 352
>gi|344344204|ref|ZP_08775068.1| GTP-binding proten HflX [Marichromatium purpuratum 984]
gi|343804161|gb|EGV22063.1| GTP-binding proten HflX [Marichromatium purpuratum 984]
Length = 428
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 171/299 (57%), Gaps = 32/299 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E +K + + D + V+ LS Q+RNLER VLDR GLI++IF
Sbjct: 58 FLGSGKAEELKDLVAACTA----DLVIVDHPLSPAQERNLERLVQCRVLDRSGLILDIFA 113
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A + E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 114 QRARSFEGKLQVELAQLRHLSTRLVR----------GWTHLE-------RQKGGIG-LRG 155
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + +R + L ++ ++ RA R AR + L+ V++VGYTNA
Sbjct: 156 PGETQLETDRRLLGKRVAMLERRLGKIEGQRAQGRKARAKAE------LSVVSLVGYTNA 209
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + L+++ +F +LFATLDP L+ + LP+G + LL+DTVGF+SDLP +LV AF
Sbjct: 210 GKSTLFNRLTEAGVFQADQLFATLDPTLRRLELPTGERALLADTVGFVSDLPHELVAAFR 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
+TLEE A LL+HV+D A T V QVL+++G SE +EV+NKID +E
Sbjct: 270 STLEEARNAALLLHVIDAAATQRSRLITDVEQVLEEIGCSE---IPRLEVFNKIDRLEE 325
>gi|288800257|ref|ZP_06405715.1| GTP-binding protein HflX [Prevotella sp. oral taxon 299 str. F0039]
gi|288332470|gb|EFC70950.1| GTP-binding protein HflX [Prevotella sp. oral taxon 299 str. F0039]
Length = 416
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 168/298 (56%), Gaps = 21/298 (7%)
Query: 128 TFFGPGTVETIKCHI-NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEI 186
T+ G G +E IK +I + E++ + + + LS Q RN+E +LDR LI++I
Sbjct: 62 TYVGKGKLEEIKEYIVSEEEAERPVGMVIFDDELSPKQMRNIENELQVKILDRTSLILDI 121
Query: 187 FNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFI 246
F A T +K Q ELA Y RL R+ E + + G G +
Sbjct: 122 FAMRAQTANSKTQVELAQYRYMLPRLQRL---------WTHLERQGGGSGSGGGKGSVGL 172
Query: 247 SGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G GET+L++ RR IL+R S L ++ E+ + + QR R R + VA+VGYT
Sbjct: 173 RGPGETQLEMDRRIILQRISLLKERLVEIDKQKVTQRKNRGR--------MIRVALVGYT 224
Query: 307 NAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAF 366
N GKSTL++ LS S++F++ +LFATLD ++ VV+ + LL+DTVGFI LP LVD+F
Sbjct: 225 NVGKSTLMNLLSKSEVFAENKLFATLDTTVRKVVIENLPFLLADTVGFIRKLPTDLVDSF 284
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+TL+EV EADLLVHV+D + P E+H V L+ + ++ K I ++NKID +
Sbjct: 285 KSTLDEVREADLLVHVVDISHPEFEDHIRVVESTLKDLDAAD---KPSIMIFNKIDNY 339
>gi|118364850|ref|XP_001015646.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89297413|gb|EAR95401.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
Length = 677
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 184/337 (54%), Gaps = 36/337 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSG---------I 163
+ ++ +K K +FF G + I +I ++I N ++S I
Sbjct: 201 IAKSSLIKMKKIIGKSFFTKGKLMDIGIYIKD-------NSIDCNPMMSSDTEAEGDEPI 253
Query: 164 QQRNLERAWGKP--VLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGP--- 218
Q + + + GK V DR +I++IF A T+ A+ Q E+ L Y K++L R G
Sbjct: 254 QTSDYDNSSGKKIRVFDRFTMILQIFAKRAQTQIARHQIEVCFLNYLKTKLQREGGTTFN 313
Query: 219 ------DGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQI 272
G L + EVVSA+ R + G+ + G GET+L+LQRR + ++ S L ++
Sbjct: 314 AMYNIFKGDLMTAQEISLEVVSAKSRAAKGK--VQGEGETQLELQRRLVNDKLSKLKKEL 371
Query: 273 EEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLF-SDARLFAT 331
+ + R R++ + + T+A++GYTNAGKS L++AL D+ S LF T
Sbjct: 372 ISLLENQNFLREKRKKQYNN----VPTIALIGYTNAGKSALMNALIKKDVVESKDNLFQT 427
Query: 332 LDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
L + L SG+ ++ DT+GFI+DLP +LVD+F +TL EV ADL++HV D + P+
Sbjct: 428 LSTTSRKFKLISGQQAIILDTIGFITDLPHELVDSFQSTLMEVEHADLVLHVRDISHPHT 487
Query: 391 EEHRTTVLQVLQQVGVSEEKLKN-MIEVWNKIDYHDE 426
E+ + TVL+VL+Q+G ++ N MIEVWNK+D +E
Sbjct: 488 EDQKKTVLKVLKQLGFDQQFYTNKMIEVWNKMDLLEE 524
>gi|374308648|ref|YP_005055079.1| GTP-binding protein HflX [Filifactor alocis ATCC 35896]
gi|291166975|gb|EFE29021.1| GTP-binding protein HflX [Filifactor alocis ATCC 35896]
Length = 428
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 168/307 (54%), Gaps = 40/307 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G VE ++ AE+ E++ I N LSG Q RNLE G V+DR LI++IF
Sbjct: 63 YIGKGKVEELR---ELAENM-EVNLIVFNNELSGSQLRNLEEGIGVTVIDRTMLILDIFA 118
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L YK RL+ + +S G G G RG
Sbjct: 119 KRARTGEGKLQVELAQLKYKLPRLI--------------NSSTNLSRTGAGIGARG---- 160
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE +L+ +RRI + + +++EV+ R VQR R + L VA+ GYTNA
Sbjct: 161 PGEKKLETDKRRIQRKIFEIERELKEVKHNREVQRKGRLKSE------LPIVALAGYTNA 214
Query: 309 GKSTLVSAL--------SDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLP 359
GKSTL + L + ++F LFATLD L+ LP+G + LL+DTVGF+S+LP
Sbjct: 215 GKSTLFNELLKEHKEYTEEKEVFVKNMLFATLDTTLRKSQLPNGMEYLLTDTVGFVSNLP 274
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV+AFH+TLEE+ ADL++HV+D + + T VL+++GV + + + V+N
Sbjct: 275 HDLVNAFHSTLEEIKYADLILHVVDVSNEKYDLQMNTTQHVLKEIGVGDIPI---VTVFN 331
Query: 420 KIDYHDE 426
KID +E
Sbjct: 332 KIDLLEE 338
>gi|421482979|ref|ZP_15930558.1| GTP-binding proten HflX [Achromobacter piechaudii HLE]
gi|400198783|gb|EJO31740.1| GTP-binding proten HflX [Achromobacter piechaudii HLE]
Length = 368
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 157/272 (57%), Gaps = 28/272 (10%)
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D + + LS QQRNLER + V+DRV LI++IF A + E KLQ ELA L + +R
Sbjct: 68 DIVLFDQPLSPAQQRNLERVFNLRVVDRVALILDIFALRAKSHEGKLQVELAQLQHLSTR 127
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L R+ S R GG G + G GE++L++ RR I + L +
Sbjct: 128 LTRM-----------------WSHLERQRGGIG-MRGPGESQLEMDRRMIGAKVKTLRER 169
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
++ V R R QR AR R G +V++VGYTNAGKSTL +AL+ +D ++ +LFAT
Sbjct: 170 LDRVERQRVTQRRARARGGA------LSVSLVGYTNAGKSTLFNALTRADTYAADQLFAT 223
Query: 332 LDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
LD + + + +G V++SDTVGFI DLP L+ AF ATLEE V ADLL+HV+D +P
Sbjct: 224 LDTTTRRIWIEGAGNVVISDTVGFIRDLPHDLIAAFRATLEETVHADLLLHVVDAASPQR 283
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+E V +VL ++G S I V+NKID
Sbjct: 284 DEQIFEVNKVLAEIGASTVP---TILVYNKID 312
>gi|16752564|ref|NP_444826.1| GTP-binding protein HflX [Chlamydophila pneumoniae AR39]
gi|7189200|gb|AAF38134.1| GTP-binding protein HflX, putative [Chlamydophila pneumoniae AR39]
Length = 472
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 155/260 (59%), Gaps = 24/260 (9%)
Query: 164 QQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLT 223
QQRNLE+ G VLDR LI+EIF++ A T EA +Q +LA Y RL R+ G
Sbjct: 116 QQRNLEKRLGLVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKRLWGH----- 170
Query: 224 FGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQR 283
+S + G G GF+ G GE +++L RR + ER L +Q++ V + RA +R
Sbjct: 171 ---------LSRQKSGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERR 221
Query: 284 AARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS 343
+ R RG+ T A++GYTN+GKSTL++ L+ +D + + +LFATLDP+ + VLP
Sbjct: 222 KVKSR------RGIPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPG 275
Query: 344 GK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ 402
G+ VLL+DTVGFI LP LV AF +TLE D+L+HV+D + P EH T + Q
Sbjct: 276 GRHVLLTDTVGFIRKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQ 335
Query: 403 QVGVSEEKLKNMIEVWNKID 422
++ + + + +I V NK+D
Sbjct: 336 ELKIEKPR---IITVLNKVD 352
>gi|116334341|ref|YP_795868.1| GTPase [Lactobacillus brevis ATCC 367]
gi|116099688|gb|ABJ64837.1| GTPase [Lactobacillus brevis ATCC 367]
Length = 425
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 168/304 (55%), Gaps = 35/304 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + + + +D + VN L+ Q RNLE+ ++DR GLI+EIF
Sbjct: 54 TYFGTGKVEELATIV----ADDGVDTVVVNDELTPSQIRNLEKVTKARIIDRTGLILEIF 109
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A ++EAKLQ +LA L Y+ RL T ++ + + GG GF +
Sbjct: 110 ANRAQSREAKLQVQLAKLQYQLPRL-------------HTSASQRLDQQTGSGGGGGFTN 156
Query: 248 -GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYT 306
G+GE++ ++ RR + +H+ +++E+ + A QR R R+ L +VA+VGYT
Sbjct: 157 RGSGESQTEISRRTLQRAITHVNHELKEINQAAATQRQQRERNQ------LPSVALVGYT 210
Query: 307 NAGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDL 358
NAGKSTL++AL + +F LFATLD ++ + P K+LLSDTVGF+S L
Sbjct: 211 NAGKSTLMNALVREFGKSDEKQVFVKNMLFATLDTSVRQLTFPDQKKLLLSDTVGFVSQL 270
Query: 359 PLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVW 418
P QLV AF +TL E ADLLV V+D PN E T Q L +GV++ M+ V+
Sbjct: 271 PTQLVKAFRSTLAEAANADLLVQVVDYADPNKEAMMATTEQTLHDIGVTDVP---MVTVF 327
Query: 419 NKID 422
NK D
Sbjct: 328 NKAD 331
>gi|449104034|ref|ZP_21740776.1| GTP-binding protein HflX [Treponema denticola AL-2]
gi|448963891|gb|EMB44565.1| GTP-binding protein HflX [Treponema denticola AL-2]
Length = 391
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/353 (37%), Positives = 183/353 (51%), Gaps = 45/353 (12%)
Query: 77 LQAKLNEALCLANSLEEQRDGYFDTDFFDKELPP---HVVVQNPSLKSGKARADTFFGPG 133
LQ K EAL +EE+ F K L + +NP+ T G G
Sbjct: 33 LQEKSAEAL---KEIEEKELKSLVETIFLKPLSSLRFRIAKENPA---------TLVGSG 80
Query: 134 TVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHT 193
+E I I E +G D + N+ +S QRNLE A V+DR +II+IF A T
Sbjct: 81 QLEKIAQAI---EEEGA-DLVVFNSAVSPRIQRNLEAALNTCVIDRSEVIIQIFADRAQT 136
Query: 194 KEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETE 253
+EA LQAELA L Y RL R R T + RG G RG GAGE +
Sbjct: 137 REAVLQAELARLEYSMPRLTR------RWT-------SLAQQRGGAKGTRGASRGAGEKK 183
Query: 254 LQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTL 313
L+L RR + + L ++E VR R+ QR + R G+ G A+VGYTNAGKS+L
Sbjct: 184 LELDRRHLKTEIAKLKKEVERVRLQRSEQR--KTRLNGNKKIG----AIVGYTNAGKSSL 237
Query: 314 VSALSDSDLFSDARLFATLDPRLKSVVLPSG----KVLLSDTVGFISDLPLQLVDAFHAT 369
+ LS +++F++ +LFATLD + V L +G ++LL+DTVGF+S+LP QL+DAF +T
Sbjct: 238 LKKLSGAEVFTEDKLFATLDAETRKVFLQTGEKNIQILLTDTVGFVSNLPHQLIDAFRST 297
Query: 370 LEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
LEE AD L+ V D P + E +VL ++ S+ K I NK+D
Sbjct: 298 LEEAALADFLIIVCDAAHPAMPECLEITKKVLDELSCSD---KPSIIAINKMD 347
>gi|262047463|ref|ZP_06020419.1| GTP-binding protein HflX [Lactobacillus crispatus MV-3A-US]
gi|260572233|gb|EEX28797.1| GTP-binding protein HflX [Lactobacillus crispatus MV-3A-US]
Length = 421
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 195/372 (52%), Gaps = 43/372 (11%)
Query: 78 QAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKA-RADTFFGPGTVE 136
Q K +A +L +Q Y+ T+ + ++ V S ++ ++ A T+FG G +
Sbjct: 5 QPKKTKAYIAGVNLNDQNFDYYMTELANLTEANNMEVVGQSFQNAESIVAGTYFGVGKIN 64
Query: 137 TIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEA 196
I+ G ++K + +N L+ +Q RNLE+ V+DR LI+EIF + A TK+A
Sbjct: 65 EIRTMAQGLKAK----VLVLNDELTPVQIRNLEKLTKMRVIDRTELILEIFASRARTKQA 120
Query: 197 KLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQL 256
KLQ +LA L Y+ RL E + RG G RG AGE++L+L
Sbjct: 121 KLQVQLARLQYELPRL-------------HPSENNLDQQRGGGLANRG----AGESKLEL 163
Query: 257 QRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSA 316
RR I ++ S + +++ V + +AARR + VA+VGYTNAGKST ++
Sbjct: 164 NRRTIGKQISAIKKELKAVAGQEEI-KAARRNQSR-----IPKVALVGYTNAGKSTTMNG 217
Query: 317 L--------SDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFH 367
L +D ++F LFATLD ++ + L +LSDTVGFIS LP LV++F
Sbjct: 218 LLREFSKEGADKEVFVKNMLFATLDTSVRRIDLKDNFSFILSDTVGFISKLPHNLVESFK 277
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
ATL+E +ADLL++V+D + PN+ + T VL ++GV E MI +NK D D
Sbjct: 278 ATLQETRDADLLINVVDASDPNMVQMIRTTQNVLDEIGVKEIP---MITAYNKADKTDRN 334
Query: 428 MGDVEYIDGDDI 439
+E GDDI
Sbjct: 335 YPQIE---GDDI 343
>gi|158320032|ref|YP_001512539.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs]
gi|158140231|gb|ABW18543.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs]
Length = 416
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 177/327 (54%), Gaps = 42/327 (12%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
K + + G G +E + I +E E+ + N LSG Q RN+E V DR L
Sbjct: 46 KVNSAYYIGNGKIEELIELI--SEKNAEI--VIFNHELSGSQLRNIEEKVQCRVADRTAL 101
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I++IF A T+EAKLQ E+A L Y+ RLV G + L GR SGG
Sbjct: 102 ILDIFAQRAKTREAKLQVEVAWLQYELPRLV---GSNENL--------------GRQSGG 144
Query: 243 RGFIS-GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G + GAGE +++L RR+I ER + L ++E ++ R QR R+ + VA
Sbjct: 145 VGTKNRGAGEKKIELDRRKIEERIAALNKELEILKGQRTTQRKERKE------SNIPNVA 198
Query: 302 VVGYTNAGKSTLVSALSDSD-------LFSDARLFATLDPRLKSVVLPSGK-VLLSDTVG 353
+VGYTNAGKS++++A+ D +F LFATL+ ++ + + K LLSDTVG
Sbjct: 199 LVGYTNAGKSSIMNAMMDQSQHKDNKKVFEKDMLFATLETSVRHIKVSGNKSFLLSDTVG 258
Query: 354 FISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN 413
F+SDLP LV AF +TLEEV EADLL+HV+D + P+ E + L+Q+G +
Sbjct: 259 FVSDLPHNLVKAFRSTLEEVCEADLLIHVVDISNPHYEAQIDVTKETLKQIGADHIPV-- 316
Query: 414 MIEVWNKIDYHDEEMGDVEYIDGDDIS 440
I +NKID DE + E+ +G IS
Sbjct: 317 -IYAYNKIDLVDETL---EHKEGIYIS 339
>gi|166154589|ref|YP_001654707.1| putative nucleotide-binding protein [Chlamydia trachomatis 434/Bu]
gi|166155464|ref|YP_001653719.1| putative nucleotide-binding protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335856|ref|ZP_07224100.1| putative nucleotide-binding protein [Chlamydia trachomatis L2tet1]
gi|339626051|ref|YP_004717530.1| GTP-binding protein HflX [Chlamydia trachomatis L2c]
gi|165930577|emb|CAP04074.1| putative nucleotide-binding protein [Chlamydia trachomatis 434/Bu]
gi|165931452|emb|CAP07028.1| putative nucleotide-binding protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|339461357|gb|AEJ77860.1| GTP-binding protein HflX [Chlamydia trachomatis L2c]
gi|440526184|emb|CCP51668.1| GTPase HflX [Chlamydia trachomatis L2b/8200/07]
gi|440536009|emb|CCP61522.1| GTPase HflX [Chlamydia trachomatis L2b/795]
gi|440537791|emb|CCP63305.1| GTPase HflX [Chlamydia trachomatis L1/1322/p2]
gi|440540461|emb|CCP65975.1| GTPase HflX [Chlamydia trachomatis L2/25667R]
gi|440542237|emb|CCP67751.1| GTPase HflX [Chlamydia trachomatis L2b/UCH-2]
gi|440543128|emb|CCP68642.1| GTPase HflX [Chlamydia trachomatis L2b/Canada2]
gi|440544019|emb|CCP69533.1| GTPase HflX [Chlamydia trachomatis L2b/LST]
gi|440544909|emb|CCP70423.1| GTPase HflX [Chlamydia trachomatis L2b/Ams1]
gi|440545799|emb|CCP71313.1| GTPase HflX [Chlamydia trachomatis L2b/CV204]
gi|440914061|emb|CCP90478.1| GTPase HflX [Chlamydia trachomatis L2b/Ams2]
gi|440914951|emb|CCP91368.1| GTPase HflX [Chlamydia trachomatis L2b/Ams3]
gi|440915843|emb|CCP92260.1| GTPase HflX [Chlamydia trachomatis L2b/Canada1]
gi|440916737|emb|CCP93154.1| GTPase HflX [Chlamydia trachomatis L2b/Ams4]
gi|440917627|emb|CCP94044.1| GTPase HflX [Chlamydia trachomatis L2b/Ams5]
Length = 447
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 163/273 (59%), Gaps = 24/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D +++ +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFA 259
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLP G +VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T +LQ++G+++ + +I V NK+D
Sbjct: 320 ALEHVETTKAILQELGITQPQ---VITVLNKMD 349
>gi|325954467|ref|YP_004238127.1| GTP-binding proten HflX [Weeksella virosa DSM 16922]
gi|323437085|gb|ADX67549.1| GTP-binding proten HflX [Weeksella virosa DSM 16922]
Length = 411
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 165/294 (56%), Gaps = 33/294 (11%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G +E I ++ + +D + + L+ Q +N+E+ + ++DR LI++IF
Sbjct: 61 FVGSGKLEEITSYV----EENNIDTVIFDDELTPSQLKNIEKVVNRKIIDRTQLILDIFA 116
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T A+ Q ELA Y RL R+ + R GG G + G
Sbjct: 117 QRAQTSYARTQVELAQYQYLLPRLTRMW-----------------THLERQRGGIG-MRG 158
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GETE++ RR I +R + L +++ + + A QR R + VA+VGYTN
Sbjct: 159 PGETEIETDRRIIRDRITLLREKLKSIDKQMATQRTNRG--------AMVRVALVGYTNV 210
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHA 368
GKSTL++ LS SD+F++ +LFATLD ++ VV+ + LL+DTVGFI LP QLV++F +
Sbjct: 211 GKSTLMNVLSKSDVFAEDKLFATLDTTVRKVVIGNLPFLLTDTVGFIRKLPTQLVESFKS 270
Query: 369 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
TL+EV EADLL+HV+D + + E+H +V ++L ++ K K + V+NKID
Sbjct: 271 TLDEVREADLLIHVVDISHASFEDHINSVNKILDEIN---SKDKPTVMVFNKID 321
>gi|452126150|ref|ZP_21938733.1| GTP-binding protein [Bordetella holmesii F627]
gi|452129518|ref|ZP_21942093.1| GTP-binding protein [Bordetella holmesii H558]
gi|451921245|gb|EMD71390.1| GTP-binding protein [Bordetella holmesii F627]
gi|451923153|gb|EMD73295.1| GTP-binding protein [Bordetella holmesii H558]
Length = 368
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 163/298 (54%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G VE D + + LS QQRNLER + V+DRV LI++
Sbjct: 46 AKYFIGSGKVEEGVA----LAGAALADIVLFDQPLSPAQQRNLEREFNLRVVDRVALILD 101
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L + +RL R+ S R GG G
Sbjct: 102 IFALRAKSHEGKLQVELAQLQHLSTRLTRM-----------------WSHLERQRGGIG- 143
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GE++L++ RR I + L +++ V R R QR AR R G +V++VGY
Sbjct: 144 MRGPGESQLEMDRRMIGAKVKMLRERLDRVERQRVTQRRARARGGA------LSVSLVGY 197
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL ++L+ + ++ +LFATLD + + + +G V+LSDTVGFI DLP L+
Sbjct: 198 TNAGKSTLFNSLTRAGAYAADQLFATLDTTTRRIWIEGAGSVVLSDTVGFIRDLPPNLIA 257
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATLEE V ADLL+HV+D +P +E V +VL ++G +E I V+NKID
Sbjct: 258 AFRATLEETVHADLLLHVVDAASPQRDEQVFEVNKVLAEIGAAEVP---TILVYNKID 312
>gi|281421297|ref|ZP_06252296.1| GTP-binding protein HflX [Prevotella copri DSM 18205]
gi|281404832|gb|EFB35512.1| GTP-binding protein HflX [Prevotella copri DSM 18205]
Length = 415
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 178/328 (54%), Gaps = 21/328 (6%)
Query: 98 YFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKG-ELDAIFV 156
Y D F + V V+ + K T+ G G +E IK +I E + E+ +
Sbjct: 32 YLDELEFLADTAGAVTVKRFTQKVVSPNQTTYVGKGKLEEIKQYIKDEEEEDREVGMVIF 91
Query: 157 NAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR 216
+ LS Q RN+E+ +LDR LI++IF A T AK Q ELA Y RL R+
Sbjct: 92 DDELSAKQIRNIEQELQVKILDRTSLILDIFAMRAQTAAAKTQVELAQYRYMLPRLQRL- 150
Query: 217 GPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVR 276
E + + G G + G GET+L++ RR IL R S L ++ E+
Sbjct: 151 --------WTHLERQGGGSGSGGGKGSVGLRGPGETQLEMDRRIILGRMSLLKERLAEID 202
Query: 277 RTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRL 336
+ + QR R R + VA+VGYTN GKST+++ LS S++F++ +LFATLD +
Sbjct: 203 KQKTTQRKNRGR--------MVRVALVGYTNVGKSTIMNLLSKSEVFAENKLFATLDTTV 254
Query: 337 KSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTT 396
+ VV+ + LL+DTVGFI LP LVD+F +TL+E EADLL+HV+D + P+ EE
Sbjct: 255 RKVVVDNLPFLLADTVGFIRKLPTDLVDSFKSTLDETREADLLLHVVDISHPDFEEQIQV 314
Query: 397 VLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
V L+++ +++ +MI ++NKID +
Sbjct: 315 VENTLKELDCADK--PSMI-IFNKIDNY 339
>gi|389686298|ref|ZP_10177619.1| GTP-binding protein HflX [Pseudomonas chlororaphis O6]
gi|399004967|ref|ZP_10707568.1| GTP-binding protein HflX [Pseudomonas sp. GM17]
gi|425897212|ref|ZP_18873803.1| GTP-binding protein HflX [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|388549759|gb|EIM13031.1| GTP-binding protein HflX [Pseudomonas chlororaphis O6]
gi|397884107|gb|EJL00593.1| GTP-binding protein HflX [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|398127886|gb|EJM17287.1| GTP-binding protein HflX [Pseudomonas sp. GM17]
Length = 433
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 174/298 (58%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE ++ + + +D + N IL+ Q+RNLERA+ V+DR GLI++
Sbjct: 55 AKYLVGSGKVEELRDLVKAEQ----VDLVIFNHILTPSQERNLERAFECRVIDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L Y +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEYMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + +++E+VR R R R+R +D + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRLRQIKARLEKVRSQREQARRGRKR---AD---IPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +++++SD+F+ +LFATLDP L+ + L G V+L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNSVTESDVFAANQLFATLDPTLRRLELDDLGPVVLADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATLEE +DLL+HV+D P V+ VL ++G + ++EV+NK+D
Sbjct: 267 AFRATLEESSNSDLLLHVIDAHEPERMAQIEQVMVVLGEIGAQD---LPILEVYNKLD 321
>gi|187478827|ref|YP_786851.1| GTP-binding protein [Bordetella avium 197N]
gi|115423413|emb|CAJ49947.1| GTP-binding protein [Bordetella avium 197N]
Length = 368
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 165/298 (55%), Gaps = 32/298 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G VE + GA D + + LS QQRNLER + V+DRV LI++
Sbjct: 46 AKFFIGSGKVEE-GVALAGASLA---DIVLFDQPLSPAQQRNLEREFNLRVVDRVALILD 101
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A + E KLQ ELA L + +RL R+ S R GG G
Sbjct: 102 IFALRAKSHEGKLQVELAQLQHLSTRLTRL-----------------WSHLERQRGGIG- 143
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GE++L++ RR I + L ++E V R R QR AR R G +V++VGY
Sbjct: 144 MRGPGESQLEMDRRMIGAKVKMLRERLERVERQRVTQRRARARGGA------LSVSLVGY 197
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL+ + ++ +LFATLD + + +G V+LSDTVGFI +LP L+
Sbjct: 198 TNAGKSTLFNALTRAGAYAADQLFATLDTTTRRFWIEGAGSVVLSDTVGFIRELPPNLIA 257
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
AF ATLEE V ADLL+HV+D +P EE V +VL ++G ++ I V+NKID
Sbjct: 258 AFRATLEETVHADLLLHVVDAASPQREEQIFEVNKVLAEIGAADIP---TILVYNKID 312
>gi|333999653|ref|YP_004532265.1| GTP-binding protein HflX [Treponema primitia ZAS-2]
gi|333739023|gb|AEF84513.1| GTP-binding protein HflX [Treponema primitia ZAS-2]
Length = 447
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 162/283 (57%), Gaps = 38/283 (13%)
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D + + LS QQRN ER G +DR LII+IF A T+EA+LQ LA L Y R
Sbjct: 82 DCLVFDGDLSPSQQRNWERLTGISAVDRQELIIQIFAGRAKTREAELQVSLAELYYTLPR 141
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L + +R RG GR G+GET+L+ RR+I +R L +
Sbjct: 142 LT---------------HKYIDLSRQRG--GRYGTKGSGETKLETDRRQIEQRIHRLKEE 184
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
+E VR+ R QR R R A+ A+VGYTN+GKS+L++AL+ +D+ ++ +LFAT
Sbjct: 185 LEGVRKNRETQRKKRDRDS-------ASCALVGYTNSGKSSLLNALTGADVLAEDKLFAT 237
Query: 332 LDPRLKSVVLPS-GKVL-LSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
LD + VLPS G+ L +SDTVGFI LP L++AF +TLEE +ADLL+HVLD + P+
Sbjct: 238 LDATTR--VLPSKGRTLVISDTVGFIRRLPHALINAFRSTLEETAQADLLIHVLDASDPD 295
Query: 390 LEEHRTTVLQVLQQVGV----------SEEKLKNMIEVWNKID 422
++++ T L VL+++G S K M+ V NKID
Sbjct: 296 IDQYFETTLSVLRELGAVSSVEAAGRPSPPDKKPMLTVLNKID 338
>gi|229074802|ref|ZP_04207817.1| hypothetical protein bcere0024_16090 [Bacillus cereus Rock4-18]
gi|228708314|gb|EEL60472.1| hypothetical protein bcere0024_16090 [Bacillus cereus Rock4-18]
Length = 419
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 171/313 (54%), Gaps = 39/313 (12%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E + ++N E+ + + N LS Q RNLE V+DR LI++IF
Sbjct: 55 YIGKGKIEEVAAYVNEVEA----NMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFA 110
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS- 247
A TKEA+LQ E+A L Y RL+ +R + GR SGG G +
Sbjct: 111 QRAKTKEAQLQVEVAHLQYMMPRLIGLR-----------------ESLGRQSGGVGTKNK 153
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GE +L+L RR+I E+ S L +E + R QR R+++ + VA+VGYTN
Sbjct: 154 GVGEKKLELDRRKIEEQISVLNKDLEALVAQRQTQRKQRKKNE------VPVVALVGYTN 207
Query: 308 AGKSTLVSAL-------SDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLP 359
AGKST ++A+ + +F LFATL+ ++++ LP K LL+DTVGF+S LP
Sbjct: 208 AGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLETSVRNIDLPDNKSFLLTDTVGFVSKLP 267
Query: 360 LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWN 419
LV AF +TLEEV EADLL+HV+D PN E+ + L+++GV E + I +N
Sbjct: 268 HHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQLIDITNETLKKIGV--ENIPT-IYAYN 324
Query: 420 KIDYHDEEMGDVE 432
K D D E+ V+
Sbjct: 325 KSDMIDVEIPKVQ 337
>gi|116618936|ref|YP_819307.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
gi|339481097|ref|ZP_08656756.1| GTPase [Leuconostoc pseudomesenteroides KCTC 3652]
gi|116097783|gb|ABJ62934.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
Length = 433
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 191/358 (53%), Gaps = 52/358 (14%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G VE + A ++D I VN L+ Q RNLE+ V+DR GLI+EIF
Sbjct: 53 TYFGKGKVE----ELGEAVKTYDVDMIVVNDELTPSQIRNLEKTTDATVVDRTGLILEIF 108
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TK AKLQ +LA L Y+ RL + + + G+GG GF S
Sbjct: 109 AQRAQTKVAKLQVQLARLQYQLPRLRK--------------SMSISLDQQTGTGGAGFTS 154
Query: 248 -GAGETELQLQRRRILERRSHL---LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVV 303
G+GET+L+ R+RI + H+ L+ +++ TR++QR A L VA+V
Sbjct: 155 RGSGETKLEQSRQRITSQMVHVRQELADLDKSENTRSMQRHAN---------NLPNVALV 205
Query: 304 GYTNAGKSTLVSAL-------SDSD----LFSDARLFATLDPRLKSVVLPSGK-VLLSDT 351
GYTNAGKSTL++ L +D+D +F LFATL+ ++ + LP + LLSDT
Sbjct: 206 GYTNAGKSTLMNRLLMRFGVGADNDDSKQVFEKDMLFATLNTTVRQLTLPDKRQFLLSDT 265
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGF+S LP LV AF +TL+E ADL++HV+D + + + T + L ++GV+
Sbjct: 266 VGFVSKLPHNLVAAFKSTLQEAANADLILHVVDVSDEHYKAMMETTEKTLTEIGVTG--- 322
Query: 412 KNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYGGDDAD 469
K +I V+NK D + D I GD++ S DT S+ ++ I + +D++
Sbjct: 323 KPVITVYNKADRTELHYPD---ISGDNVITLSAL---DTNSQDALIDLIVKHIFNDSE 374
>gi|255348744|ref|ZP_05380751.1| putative nucleotide-binding protein [Chlamydia trachomatis 70]
gi|255503284|ref|ZP_05381674.1| putative nucleotide-binding protein [Chlamydia trachomatis 70s]
Length = 447
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 163/273 (59%), Gaps = 24/273 (8%)
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + ++ +S QQRNLE+ VLDR LI+EIF + A T EA LQ ELA Y
Sbjct: 100 IGTLLIDEEISPSQQRNLEKRLRVVVLDRTELILEIFASRALTAEAGLQVELAQARYLLP 159
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ G +S + G G GF+ G GE +++L RR + ER L
Sbjct: 160 RLKRMWGH--------------LSRQKSGGSGGGFVKGEGEKQIELDRRIVRERIHKLSR 205
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ V R R +R A++R+ + T A++GYTN+GKSTL++ L+ +D +++ +LFA
Sbjct: 206 DLKNVERQREERRKAKKRNQ------IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFA 259
Query: 331 TLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN 389
TLDP+ + VLP G +VLL+DTVGFI LP LV AF +TLE ++ D+L+HV+D + P
Sbjct: 260 TLDPKTRRCVLPCGQRVLLTDTVGFIRKLPHTLVAAFKSTLEAALQEDILLHVVDASHPL 319
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
EH T +LQ++G+++ + +I V NK+D
Sbjct: 320 ALEHVETTNAILQELGITQPQ---VITVLNKMD 349
>gi|448747495|ref|ZP_21729153.1| GTP-binding protein, HflX [Halomonas titanicae BH1]
gi|445564960|gb|ELY21074.1| GTP-binding protein, HflX [Halomonas titanicae BH1]
Length = 436
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 177/310 (57%), Gaps = 34/310 (10%)
Query: 119 LKSGKARAD--TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPV 176
L + + R D TF G G +E ++ + E+ + + N LS Q+RN+E+ V
Sbjct: 46 LTASRHRPDSRTFIGSGKLEELRALLAAHEA----ELVIFNHSLSPSQERNVEQELKCRV 101
Query: 177 LDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSAR 236
LDR GLI++IF A T E KLQ ELA L Y +RLVR G T
Sbjct: 102 LDRTGLILDIFAQRARTHEGKLQVELAQLEYMSTRLVR----------GWTHLE------ 145
Query: 237 GRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRG 296
R GG G + G GET+L+ RR + R + ++++VR R R AR R
Sbjct: 146 -RQKGGIG-LRGPGETQLETDRRLLRGRIKSIHKRLDKVRSQRDQNRRARAR------AE 197
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFI 355
+ +V++VGYTNAGKSTL +AL++S++++ +LFATLDP L+ + + G V+++DTVGFI
Sbjct: 198 IHSVSLVGYTNAGKSTLFNALTNSEVYAADQLFATLDPTLRRLEIEDVGPVVMADTVGFI 257
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI 415
LP +LV+AF ATL+E EA LLVHV+D P+ E + V VL+++G + ++
Sbjct: 258 RHLPHKLVEAFQATLQEASEASLLVHVIDAADPDRELNVEQVELVLKEIGADDVP---VL 314
Query: 416 EVWNKIDYHD 425
+V NKID D
Sbjct: 315 KVMNKIDKLD 324
>gi|350562403|ref|ZP_08931237.1| GTP-binding proten HflX [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349779345|gb|EGZ33691.1| GTP-binding proten HflX [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 456
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 159/270 (58%), Gaps = 29/270 (10%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
IF N LS Q+RNLER VLDR GLI++IF A + E KLQ ELA L + +RLV
Sbjct: 80 IF-NHPLSPSQERNLERHLECRVLDRSGLILDIFAQRARSHEGKLQVELAQLRHMSTRLV 138
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
R G T R GG G + G GET+L+ RR + R H+ ++E
Sbjct: 139 R----------GWTHLE-------RQKGGIG-LRGPGETQLETDRRLLAARIKHIERRLE 180
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLD 333
+V+R+R R ARRR+ TVA+VGYTNAGKSTL + L+++ +++ +LFATLD
Sbjct: 181 KVQRSREQGRQARRRNE------TPTVALVGYTNAGKSTLFNCLTEAQVYAADQLFATLD 234
Query: 334 PRLKSVVL-PSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEE 392
P L+ + L P V+L+DTVGF+ DLP +L+ AF ATL E EA LL+HV+D + P E
Sbjct: 235 PTLRRLDLAPHQSVILADTVGFVRDLPHELIAAFKATLTETREAALLLHVIDASDPEREA 294
Query: 393 HRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
H V VL ++G E + V+NKID
Sbjct: 295 HIEQVEDVLAEIGAGEVP---VWRVYNKID 321
>gi|325971939|ref|YP_004248130.1| GTP-binding proten HflX [Sphaerochaeta globus str. Buddy]
gi|324027177|gb|ADY13936.1| GTP-binding proten HflX [Sphaerochaeta globus str. Buddy]
Length = 440
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 170/296 (57%), Gaps = 31/296 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G VE IK + + +D + + ++ QRNLE+ V+DR +I++IF
Sbjct: 77 TLIGSGKVEAIKLLV----EELSIDVVIFDQGINPRVQRNLEKEMETCVIDRDEVILQIF 132
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A TKEA LQ ELA L Y RL R R T R GG
Sbjct: 133 ADRAATKEANLQVELARLEYSLPRLTR------RWT-----------NLNRQKGGVKGTK 175
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L+L RR+I +R L +E+V + R +QR +R G+ + T A+VGYTN
Sbjct: 176 GEGETQLELDRRQIQDRVVALKLLLEKVVQQRNIQR--NQRMNGN----IPTGAIVGYTN 229
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAF 366
+GKS+L++AL+++ + + +LFATLDP + V LP G+ +LLSDTVGFISDLP LVDAF
Sbjct: 230 SGKSSLLNALTNAGVLVEDKLFATLDPTTRLVKLPGGEEILLSDTVGFISDLPHNLVDAF 289
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TLEE AD L+ V D + P++ + T +QVL+++G ++ K I + NK+D
Sbjct: 290 KSTLEEAKYADFLIIVCDASHPDMLANYATTVQVLEELGCTD---KPAIVLANKMD 342
>gi|431925878|ref|YP_007238912.1| GTP-binding protein HflX [Pseudomonas stutzeri RCH2]
gi|431824165|gb|AGA85282.1| GTP-binding protein HflX [Pseudomonas stutzeri RCH2]
Length = 433
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 170/301 (56%), Gaps = 32/301 (10%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A G G VE + + GE++ + N L+ Q+RNLERA VLDR GLI++
Sbjct: 55 AKFLIGSGKVEELHDLVK----DGEVELVIFNHTLTPSQERNLERALECRVLDRTGLILD 110
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G T R GG G
Sbjct: 111 IFAQRARTHEGKLQVELAQLEHMSTRLVR----------GWTHLE-------RQKGGIG- 152
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
+ G GET+L+ RR + R + ++E+VR R R + +V++VGY
Sbjct: 153 LRGPGETQLETDRRLLRVRIRQIKQRLEKVRGQREQARRG------RRRADIPSVSLVGY 206
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL +AL++SD+++ +LFATLDP L+ + L G V+L+DTVGFI LP +LV+
Sbjct: 207 TNAGKSTLFNALTESDVYAANQLFATLDPTLRRLELDDVGPVVLADTVGFIRHLPHKLVE 266
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+F ATLEE ADLL+HV+D P ++ VL VL ++G +E M+EV+NK+D
Sbjct: 267 SFRATLEESSNADLLLHVIDAHEPERDQQIEQVLAVLGEIGANE---LPMLEVYNKVDLM 323
Query: 425 D 425
+
Sbjct: 324 E 324
>gi|293604548|ref|ZP_06686953.1| GTP-binding protein HflX [Achromobacter piechaudii ATCC 43553]
gi|292817129|gb|EFF76205.1| GTP-binding protein HflX [Achromobacter piechaudii ATCC 43553]
Length = 368
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 158/272 (58%), Gaps = 28/272 (10%)
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D + + LS QQRNLERA+ V+DRV LI++IF A + E KLQ ELA L + +R
Sbjct: 68 DIVLFDQPLSPAQQRNLERAFNLRVVDRVALILDIFALRAKSHEGKLQVELAQLQHLATR 127
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
L R+ S R GG G + G GE++L++ RR I + L +
Sbjct: 128 LTRM-----------------WSHLERQRGGIG-MRGPGESQLEMDRRMIGAKVKTLRER 169
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
++ V R R QR AR R G +V++VGYTNAGKSTL +AL+ +D ++ +LFAT
Sbjct: 170 LDRVERQRVTQRRARARGGA------LSVSLVGYTNAGKSTLFNALTRADSYAADQLFAT 223
Query: 332 LDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
LD + + + +G V++SDTVGFI DLP L+ AF ATLEE V ADLL+HV+D +P
Sbjct: 224 LDTTTRRIWIEGAGSVVVSDTVGFIRDLPHGLIAAFRATLEETVHADLLLHVVDAASPQR 283
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+E V +VL ++G S I V+NKID
Sbjct: 284 DEQIFEVNKVLAEIGASAIP---TILVYNKID 312
>gi|340617836|ref|YP_004736289.1| GTP-binding protein HflX [Zobellia galactanivorans]
gi|339732633|emb|CAZ95901.1| GTP-binding protein HflX [Zobellia galactanivorans]
Length = 403
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 167/297 (56%), Gaps = 33/297 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E ++ + ++ ++ + L+ QQRN+E+ ++DR LI++IF
Sbjct: 60 TLIGTGKMEEVEAFVKA----NDIGSVIFDDELTPAQQRNIEKLLRCKIVDRTSLILDIF 115
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T A+ Q ELA Y RL G T E R GG G +
Sbjct: 116 AQRAQTSYARTQVELAQYEYLLPRLT------GLWTHLE-----------RQRGGIG-MR 157
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GETE++ RR + +R S L ++ ++ R QR R L VA+VGYTN
Sbjct: 158 GPGETEIETDRRIVRDRISLLKKKLLKIDRQMETQRGNRG--------ALVRVALVGYTN 209
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL++ +S SD+F++ +LFATLD ++ VV+ + LLSDTVGFI LP QLV++F
Sbjct: 210 VGKSTLMNVISKSDVFAENKLFATLDTTVRKVVIGNLPFLLSDTVGFIRKLPTQLVESFK 269
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
+TL+EV EADLL+HV+D + P EEH +V ++L ++ ++ KN I V+NKID +
Sbjct: 270 STLDEVREADLLLHVVDISHPQFEEHIESVNKILDEIDSAD---KNTIMVFNKIDLY 323
>gi|90416482|ref|ZP_01224413.1| GTP-binding protein [gamma proteobacterium HTCC2207]
gi|90331681|gb|EAS46909.1| GTP-binding protein [gamma proteobacterium HTCC2207]
Length = 431
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 184/344 (53%), Gaps = 49/344 (14%)
Query: 126 ADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
A F G G +E I +N + + + N LS Q+RN+E VLDR GLI++
Sbjct: 57 AKLFVGTGKLEEIAAAVNSHCA----ELVIFNHNLSPSQERNIEAELKCRVLDRTGLILD 112
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF A T E KLQ ELA L + +RLVR G + RG G G RG
Sbjct: 113 IFAQRARTHEGKLQVELAQLQHLSTRLVR-------------GWTHLERQRG-GIGMRG- 157
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GET+L+ RR + +R + S++ +VR+ RA R AR R + V++VGY
Sbjct: 158 ---PGETQLESDRRMVRDRIKSIQSRLLKVRKQRAQGRRARVRAE------VPAVSLVGY 208
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQLVD 364
TNAGKSTL + L+ +D+F +LFATLDP ++ + +P G+V+ +DTVGFIS LP +LVD
Sbjct: 209 TNAGKSTLFNNLTQADVFVANQLFATLDPTMRKLEVPEQGEVVFADTVGFISHLPHRLVD 268
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF ATLEE A LL+HV+D A + + V +VL++ + KL ++ V+NK+D
Sbjct: 269 AFRATLEEAANATLLLHVVDGAAEDRATNIKRVEEVLKE--IDAHKLPTLM-VYNKVDL- 324
Query: 425 DEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDV--ECIDNYGGD 466
+ +FS D++ +PV V + N G D
Sbjct: 325 --------------LEDFSARIDRNAEGQPVAVWLSALKNEGLD 354
>gi|374813649|ref|ZP_09717386.1| GTP-binding protein HflX [Treponema primitia ZAS-1]
Length = 423
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 167/293 (56%), Gaps = 29/293 (9%)
Query: 130 FGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNA 189
FG GT + + I G ++ +D + + LS QQRN ER G +DR LII+IF
Sbjct: 62 FGLGTGKADE--IAGKAAELGVDCLVFDGELSPSQQRNWERLTGIAAVDRQELIIQIFAG 119
Query: 190 HAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGA 249
A T+EA++Q LA L Y RL + +R RG GR G+
Sbjct: 120 RARTREAEIQVALAELFYSLPRLT---------------HKYIDLSRQRG--GRYGTKGS 162
Query: 250 GETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAG 309
GET+L+ RR++ +R L ++ EVR+ RAVQR R + + +VGYTN+G
Sbjct: 163 GETKLETDRRQVEQRIYRLKEELAEVRKQRAVQRKKRDKES-------VSCTLVGYTNSG 215
Query: 310 KSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHAT 369
KS+L++AL+ +++ ++ +LFATLD + + ++++DTVGFI LP LVDAF +T
Sbjct: 216 KSSLLNALTGAEVLAEDKLFATLDATTRVLPAKGRNLVITDTVGFIRRLPHALVDAFRST 275
Query: 370 LEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
LEE V+ADLL+HVLD + P+++ + T L VL+ +G + K M+ NKID
Sbjct: 276 LEEAVQADLLIHVLDASDPDMDAYFETTLSVLRDLGADK---KPMLTALNKID 325
>gi|399519276|ref|ZP_10760084.1| tRNA modification GTPase [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399113100|emb|CCH36642.1| tRNA modification GTPase [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 433
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 171/306 (55%), Gaps = 32/306 (10%)
Query: 118 SLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVL 177
S+ S + A G G VE ++ I AE+ D + N L+ Q+RNLERA+ VL
Sbjct: 47 SVPSSRLTAKFLIGSGKVEELRDQIKAAEA----DLVIFNHTLTPSQERNLERAFECRVL 102
Query: 178 DRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARG 237
DR GLI++IF A T E KLQ ELA L + +RLVR G T
Sbjct: 103 DRTGLILDIFAQRARTHEGKLQVELAQLDHMSTRLVR----------GWTHLE------- 145
Query: 238 RGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGL 297
R GG G + G GET+L+ RR + R + ++++VR R R +
Sbjct: 146 RQKGGIG-LRGPGETQLETDRRLLRVRIRQIKQKLDKVRSQREQARRG------RRRADI 198
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFIS 356
+V++VGYTNAGKSTL +AL+ S++++ +LFATLDP L+ + L G V+L+DTVGFI
Sbjct: 199 PSVSLVGYTNAGKSTLFNALTTSEVYAADQLFATLDPTLRRLQLDDLGPVVLADTVGFIR 258
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIE 416
LP +LV+AF ATLEE +DLL+HV+D P V VL+++G E M+E
Sbjct: 259 HLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMAQIEQVQNVLREIGAHE---LPMLE 315
Query: 417 VWNKID 422
V+NK+D
Sbjct: 316 VYNKLD 321
>gi|340361956|ref|ZP_08684363.1| GTP-binding protein HflX [Neisseria macacae ATCC 33926]
gi|339888053|gb|EGQ77548.1| GTP-binding protein HflX [Neisseria macacae ATCC 33926]
Length = 396
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 177/323 (54%), Gaps = 40/323 (12%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVE----TIKCHINGAESKGELDAIFVNAILSGIQQRNL 168
+V + K KA F G G E +K H G A+F N L+ Q+RNL
Sbjct: 59 LVLRETAKRDKAHTAYFVGTGKAEELAAAVKLHDIGL-------AVF-NHELTPTQERNL 110
Query: 169 ERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETG 228
E+ VLDRVGLI+ IF A ++E KLQ ELA L + RLVR G
Sbjct: 111 EKILQCRVLDRVGLILAIFAKRAQSQEGKLQVELAQLNHLSGRLVR-------------G 157
Query: 229 EAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRR 288
+ S +G G G + G GET+L+ RR I ++ + L Q+ +V++ RA +R +R
Sbjct: 158 YGHLQSQKG-GIG----LKGPGETQLETDRRLIGQKITALKKQLVQVKKQRATRRKSR-- 210
Query: 289 HGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVL 347
+GR L T A+VGYTNAGKS+L + L+ +D+ + +LFATLD + + L V+
Sbjct: 211 ---MEGR-LKTFAIVGYTNAGKSSLFNRLTKADVLAKDQLFATLDTTARRLFLSQEAGVI 266
Query: 348 LSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS 407
L+DTVGF+ DLP +LV AF ATLEE AD+L+HV+D + P+ E V VL+++G
Sbjct: 267 LTDTVGFVRDLPHKLVSAFSATLEETALADVLLHVVDASNPDFERQMDDVNAVLEEIGAD 326
Query: 408 EEKLKNMIEVWNKIDYHDEEMGD 430
E + V+NKID E + D
Sbjct: 327 EVP---QLVVYNKIDLLPEGVRD 346
>gi|345513368|ref|ZP_08792889.1| GTP-binding protein HflX [Bacteroides dorei 5_1_36/D4]
gi|229437484|gb|EEO47561.1| GTP-binding protein HflX [Bacteroides dorei 5_1_36/D4]
Length = 417
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 181/334 (54%), Gaps = 21/334 (6%)
Query: 92 EEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAE-SKGE 150
E + Y D F E VV+ + K A + T+ G G +E IK +I+ E ++ E
Sbjct: 26 ERKTKEYLDELEFLAETAGATVVKRFTQKLPAANSVTYVGKGKLEEIKEYIHQEEENERE 85
Query: 151 LDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKS 210
+ + + LS Q N+E +LDR LI++IF A T AK Q ELA Y
Sbjct: 86 VGMVIFDDELSAKQICNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLP 145
Query: 211 RLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLS 270
RL R+ R + + G G + G GET+L++ RR IL R S L
Sbjct: 146 RLQRLWTHLER---------QGGGSGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKE 196
Query: 271 QIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
++ E+ + ++ QR R R + VA+VGYTN GKSTL++ LS S++F++ +LFA
Sbjct: 197 RLAEIDKQKSTQRKNRGR--------MIRVALVGYTNVGKSTLMNLLSKSEVFAENKLFA 248
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
TLD ++ V++ + LL+DTVGFI LP LVD+F +TL+EV EADLL+HV+D + P+
Sbjct: 249 TLDTTVRKVIIENLPFLLTDTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPDF 308
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
EE + V + + + E K + V+NK+D +
Sbjct: 309 EEQISVVDKTIADL---EAGGKPTMIVFNKVDAY 339
>gi|392390253|ref|YP_006426856.1| GTP-binding protein HflX [Ornithobacterium rhinotracheale DSM
15997]
gi|390521331|gb|AFL97062.1| GTP-binding protein HflX [Ornithobacterium rhinotracheale DSM
15997]
Length = 401
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 182/334 (54%), Gaps = 33/334 (9%)
Query: 89 NSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESK 148
N EE+ Y D F + + K + + F G G + IK + +
Sbjct: 21 NQTEEKLSEYMDELAFLAYTAGAETIARFTQKLQQPDSKYFVGSGKLNEIKEFV----EE 76
Query: 149 GELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYK 208
++D + + LS Q +N+ER + ++DR LI++IF A T A+ Q ELA Y
Sbjct: 77 NDIDTVIFDDELSPSQLKNIERVLDRKIIDRTNLILDIFAQRAETSYARTQVELAQYEYI 136
Query: 209 KSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHL 268
RL R+ + R GG G + G GET++Q RR I +R S L
Sbjct: 137 LPRLTRMW-----------------THLERQRGGIG-LRGPGETQIQTDRRIIRDRISLL 178
Query: 269 LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARL 328
++E + R Q A +R++ GS L VA+VGYTN GKSTL++ +S S++F++ +L
Sbjct: 179 KKKLETIDR----QMATQRKNRGS----LIRVALVGYTNVGKSTLMNLISKSNVFAEDKL 230
Query: 329 FATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 388
FATLD ++ VV+ + LLSDTVGFI LP QLV++F +TL+EV EADL++HV+D +
Sbjct: 231 FATLDTTVRKVVIGNLPFLLSDTVGFIRKLPTQLVESFKSTLDEVREADLILHVVDISHE 290
Query: 389 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+ E+ +V ++L+++ V + K I V+NKID
Sbjct: 291 SFEDQIRSVNEILKEIDVVD---KPTIMVFNKID 321
>gi|119776156|ref|YP_928896.1| GTP-binding protein HflX [Shewanella amazonensis SB2B]
gi|119768656|gb|ABM01227.1| GTP-binding protein HflX [Shewanella amazonensis SB2B]
Length = 435
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/329 (37%), Positives = 175/329 (53%), Gaps = 46/329 (13%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G E + + ++ + + N LS Q+RNLE VLDR LI++IF
Sbjct: 57 FVGTGKAEELAAMVAATDA----NVVIFNHALSPAQERNLEHLCRCRVLDRTTLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLRHMSTRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R ++ ++E+V + R R AR+R SD +A V++VGYTNA
Sbjct: 155 PGETQLETDRRLLRGRIKNINRRLEKVDKQREQSRRARQR---SD---MAAVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHA 368
GKSTL + L+ +++++ +LFATLDP L+ + LP G +L+DTVGFI LP LV AF A
Sbjct: 209 GKSTLFNTLTSAEVYAADQLFATLDPTLRKLELPDGAAILADTVGFIRHLPHDLVAAFKA 268
Query: 369 TLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEM 428
TL+E EADLL+HV+DC + ++ V VL+++ E + +I V NKID
Sbjct: 269 TLQETREADLLLHVIDCADEKMRDNIEQVQAVLKEIDADE--IPQLI-VCNKIDL----- 320
Query: 429 GDVEYIDGDDISNFSRAEDKDTTSEPVDV 457
+ A D+D T +P V
Sbjct: 321 ----------VEGIKPAIDRDDTGKPFRV 339
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,620,632,282
Number of Sequences: 23463169
Number of extensions: 435373385
Number of successful extensions: 1341442
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4445
Number of HSP's successfully gapped in prelim test: 3590
Number of HSP's that attempted gapping in prelim test: 1317435
Number of HSP's gapped (non-prelim): 13311
length of query: 596
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 448
effective length of database: 8,886,646,355
effective search space: 3981217567040
effective search space used: 3981217567040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)