BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007599
(596 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WTB4|Y3725_ARATH GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis
thaliana GN=At3g49725 PE=2 SV=2
Length = 620
Score = 603 bits (1554), Expect = e-171, Method: Compositional matrix adjust.
Identities = 351/611 (57%), Positives = 423/611 (69%), Gaps = 61/611 (9%)
Query: 1 MLRAISVVKRTQLRSITQTLTFP-----ISLHSYSYSSSKRQTKDNKDKDD---LHDVVT 52
MLR +S+ R +LRS T + S S SSKR T + ++ D V
Sbjct: 39 MLRTVSLA-RNRLRSETPSSFLARDRLRSKTPSSSPFSSKRHTPKTSEIEEESTPKDSVL 97
Query: 53 LFNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHV 112
L +DP P+LFLVQPRL PP +LQAKLNEALCLANSLEEQR GYF++DFFDKELP HV
Sbjct: 98 LNPKDPSSAPKLFLVQPRLAPPKYLQAKLNEALCLANSLEEQRYGYFESDFFDKELPSHV 157
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VVQNP +S K R DT+FG GTV+ IKCH+N +SK E+DA+FVNAIL+ IQQRNLER W
Sbjct: 158 VVQNPVRRSSKPRVDTYFGSGTVDNIKCHLNAEDSKEEVDAVFVNAILTAIQQRNLERIW 217
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
KPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMY KSRLVRVRG DGR TFG+ GEAEV
Sbjct: 218 AKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYNKSRLVRVRGTDGRHTFGQFGEAEV 277
Query: 233 VSARGRGSGG---RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
VSARGR GF+ GAGETELQLQRRRI +RR LLSQI+E +RTR +QRA R++
Sbjct: 278 VSARGRAGSKGTGGGFVGGAGETELQLQRRRISDRRIRLLSQIKEAQRTRLLQRAGRKKR 337
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLL 348
G +G T+AVVGYTNAGKSTL+SAL+ + L+ + RLFATLDP LKS LPSG VLL
Sbjct: 338 VGLEGESSGTIAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGNFVLL 397
Query: 349 SDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSE 408
SDTVGFISDLP+QLV AF +TLEEVVEADLL+HV+D TAPN+EEHR+TVL VL Q+GV E
Sbjct: 398 SDTVGFISDLPIQLVKAFQSTLEEVVEADLLLHVVDSTAPNIEEHRSTVLHVLNQIGVPE 457
Query: 409 EKLKNMIEVWNKIDYHDEEMGDVEYI--------DGDDISNFSRAEDKDTTSEPVDVECI 460
EKL+NMIEVWNKIDY ++E+ + +Y+ + +D ++ E D + VD + I
Sbjct: 458 EKLQNMIEVWNKIDYEEDEVEEEKYLDDGEGVGEEDEDEADLKAEETVDASEATVDEDQI 517
Query: 461 DNYGGDDADNNDGFVSEDLGESMNKNHNDYSDGWLLSGDEQDNVEEEFWNAAEDQQPEST 520
N GDDA DGWLLS DE + + EFW PE
Sbjct: 518 QNGDGDDA-----------------------DGWLLSEDENAD-DPEFWKV-----PEVA 548
Query: 521 KDVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVER-DFF 579
K + ++ PDV++SA TGVGL+ELL +ID+++K + K KSP +VER +
Sbjct: 549 K--------VDAANKKGPDVRVSALTGVGLKELLYLIDDKMK--EKKLKSPTIVERSELH 598
Query: 580 NKKWRPPRTED 590
+KWRPPR +D
Sbjct: 599 KRKWRPPRNDD 609
>sp|A0L4B2|HFLX_MAGSM GTPase HflX OS=Magnetococcus sp. (strain MC-1) GN=hflX PE=3 SV=1
Length = 432
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 181/301 (60%), Gaps = 31/301 (10%)
Query: 123 KARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGL 182
KA T+FG G VE + I + E+D VN L+ IQQRNLE+ V+DR GL
Sbjct: 54 KAVPATYFGSGQVEELARRIE----EDEIDVAVVNHALTPIQQRNLEKKLNAKVVDRTGL 109
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGG 242
I+EIF A A T+E +Q ELA+LMY++SRLVR T E V
Sbjct: 110 ILEIFAARARTREGIMQVELASLMYQQSRLVR------SWTHLERQRGGVGLR------- 156
Query: 243 RGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAV 302
G GE ++++ RR I ER L Q+EEV RTRA+QR R+ L TVA+
Sbjct: 157 ----GGPGERQIEVDRRLIRERIHKLKKQLEEVERTRALQRQPRQ------DIPLFTVAL 206
Query: 303 VGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFISDLPLQ 361
VGYTNAGKSTL + L+ + + ++ +LFATLDP +++V LP G++LLSDTVGFI LP Q
Sbjct: 207 VGYTNAGKSTLFNLLTRAGVLAEDKLFATLDPTMRAVDLPDGGRILLSDTVGFIRQLPHQ 266
Query: 362 LVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKI 421
LV AF ATLEEV+ AD+L+HV+D + P E + +V VLQ++ V + + V+NKI
Sbjct: 267 LVAAFKATLEEVMSADMLLHVVDLSDPEWERYVESVNGVLQELEVQHTR---TLTVYNKI 323
Query: 422 D 422
D
Sbjct: 324 D 324
>sp|C1F407|HFLX_ACIC5 GTPase HflX OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM
11244 / JCM 7670) GN=hflX PE=3 SV=1
Length = 432
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 176/312 (56%), Gaps = 38/312 (12%)
Query: 120 KSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDR 179
+ G+A A T G G VE ++ AES D I L+ Q RNLE A V+DR
Sbjct: 60 RRGRADAATLIGSGKVEEVRAV---AESS-HADVIVFGQNLTPTQLRNLENALPGRVIDR 115
Query: 180 VGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRG 239
LI++IF HA T+E LQ ELA L Y RL + RGR
Sbjct: 116 TQLILDIFARHARTREGMLQVELAQLEYMLPRL---------------------TGRGRE 154
Query: 240 SG---GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRG 296
G G GET+L+ RRRI R S L ++E VRR R+ QR +
Sbjct: 155 MSRLGGGIGTRGPGETQLETDRRRIQRRISTLKGELESVRRIRSQQRQR------REAVP 208
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFI 355
+ TVA+VGYTNAGKSTL +AL+ + + + +R+FATLDP+L+++VLPS KVLLSDTVGFI
Sbjct: 209 VPTVALVGYTNAGKSTLFNALTGAGVLASSRMFATLDPKLRAIVLPSRRKVLLSDTVGFI 268
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI 415
DLP L+ +F ATLEEV +A++L+HV DC++ EEHR V VL ++G + K I
Sbjct: 269 RDLPPTLISSFRATLEEVQKAEVLLHVQDCSSATREEHRAEVKHVLAELGAGD---KPQI 325
Query: 416 EVWNKIDYHDEE 427
EV NK+D E
Sbjct: 326 EVLNKVDLLSPE 337
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 522 DVCVMEKDSQSQDQHAPDVKISARTGVGLQELLEIIDERLKTLDDKQKSPNVVERDFFNK 581
D+ E+ + H + ISARTG+GL++LLE IDE L Q P V
Sbjct: 332 DLLSPEEQEGLRSGHGRPMAISARTGMGLEDLLERIDEAL------QADPMV------EA 379
Query: 582 KWRPPRTEDSSVA 594
+ R P++E +A
Sbjct: 380 RLRVPQSEGEVIA 392
>sp|Q8RAS5|HFLX_THETN GTPase HflX OS=Thermoanaerobacter tengcongensis (strain DSM 15242 /
JCM 11007 / NBRC 100824 / MB4) GN=hflX PE=3 SV=1
Length = 428
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 173/295 (58%), Gaps = 32/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
+ G G +E +K + ++ D + VN L+G Q +NLE A G ++DR LI++IF
Sbjct: 73 YIGKGKLEELKMFVENQQA----DLVIVNDELTGTQIKNLEDALGVKIVDRTNLILDIFA 128
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A +KE LQ ELA L Y+ RLV + G RL G
Sbjct: 129 KRARSKEGMLQVELAQLKYRLPRLVGLGGQLSRLGGGIGTRG------------------ 170
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L++ RR I R + ++EE+ + R +QR R+++ + VA+VGYTNA
Sbjct: 171 PGETKLEVDRRHIRNRIKAIEEKLEELEKHRNLQRQRRKKNQ------IPVVAIVGYTNA 224
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFH 367
GKSTL++AL+ +D + + +LFATLDP + +VLPSG+ V+L+DTVGFI LP LV+AF
Sbjct: 225 GKSTLLNALTGADAYVEDKLFATLDPTARKLVLPSGREVILTDTVGFIRKLPHDLVEAFK 284
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
+TLEEV ADLL+HV+D T+P+++E V +VL +G E I V+NKID
Sbjct: 285 STLEEVKYADLLLHVIDVTSPDMDEKIKVVEKVLSDLGAIETP---RINVYNKID 336
>sp|D9R4W7|HFLX_CLOSW GTPase HflX OS=Clostridium saccharolyticum (strain ATCC 35040 / DSM
2544 / NRCC 2533 / WM1) GN=hflX PE=3 SV=1
Length = 423
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 174/301 (57%), Gaps = 36/301 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGLIIE 185
T+ G G +E IK I ELDA I + LS Q RNLE A V+DR +I++
Sbjct: 60 TYLGKGKIEEIKDRI------WELDATGIVCDDELSPAQLRNLEGALDTKVMDRTMVILD 113
Query: 186 IFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
IF + A T+E K+Q ELA L Y+ +RLV +R RL G
Sbjct: 114 IFASRAVTREGKIQVELAQLRYRSARLVGLRSSLSRLGGGIGTRG--------------- 158
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
GE +L++ RR I +R L +++E+V+R R V R R D + A+VGY
Sbjct: 159 ---PGEKKLEMDRRLIHDRIGMLKAELEDVKRHREVVRQQR------DKNHVPAAAIVGY 209
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVD 364
TNAGKSTL++ L+D+ + ++ +LFATLDP +++ LP G+ +LL+DTVGFI LP L++
Sbjct: 210 TNAGKSTLLNRLTDAGILAEDKLFATLDPTTRNLSLPGGQQILLTDTVGFIRKLPHHLIE 269
Query: 365 AFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYH 424
AF +TLEE +D+++HV+DC+ P ++ V + L+++G+ + K MI V+NKID
Sbjct: 270 AFKSTLEEAKYSDIILHVVDCSNPQMDMQMYVVYETLRELGICD---KIMITVFNKIDAA 326
Query: 425 D 425
D
Sbjct: 327 D 327
>sp|Q6DCC6|GTPB6_XENLA Putative GTP-binding protein 6 OS=Xenopus laevis GN=gtpbp6 PE=2
SV=1
Length = 527
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 179/321 (55%), Gaps = 29/321 (9%)
Query: 108 LPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQR 166
LP VV + + + FG G +T+ I G ++ A+F+N LS + ++
Sbjct: 141 LPNWSVVNTLIMSTKSPDSKLIFGKGNFQTLTDVIKGHP---QITAVFLNVERLSSLTEK 197
Query: 167 NLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGE 226
+E AWG V DR +++ IF +AHTKEAKLQ LA L +S L
Sbjct: 198 EMEEAWGVKVFDRYTVVLNIFRFNAHTKEAKLQIALAELPLLRSSL-------------- 243
Query: 227 TGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAAR 286
+ E +G G R +I G+GET L++Q+R + ER + +E+V++ R + R R
Sbjct: 244 --KNETAHMDQQGGGSR-YIMGSGETFLEVQQRLLKEREIKIKYALEKVKKKRNLLRTQR 300
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPSGK 345
RR R ++++GYTN+GK+TL+ AL+ D L +LFATLD + +LP
Sbjct: 301 RR------REFPIISILGYTNSGKTTLIKALTGDEGLQPRDQLFATLDVTSHAGLLPCHM 354
Query: 346 -VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV 404
V+ DT+GF+S LP L+++F ATLE+VV +DLL+HV D + P + + +VL VL+ +
Sbjct: 355 PVIYVDTIGFLSQLPHNLIESFSATLEDVVHSDLLIHVRDISHPETTKQKASVLSVLKNL 414
Query: 405 GVSEEKLKNMIEVWNKIDYHD 425
G+ ++ L MIEV NKID D
Sbjct: 415 GLPQQLLDTMIEVQNKIDLID 435
>sp|Q73J26|HFLX_TREDE GTPase HflX OS=Treponema denticola (strain ATCC 35405 / CIP 103919
/ DSM 14222) GN=hflX PE=3 SV=1
Length = 391
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 165/299 (55%), Gaps = 30/299 (10%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T G G +E I I E +G D + N+ +S QRNLE A V+DR +II+IF
Sbjct: 75 TLVGSGQLEKIAQAI---EEEGA-DLVVFNSAVSPRIQRNLEAALNTCVIDRSEVIIQIF 130
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
A T+EA LQAELA L Y RL R R T + RG G RG
Sbjct: 131 ADRAQTREAVLQAELARLEYSMPRLTR------RWT-------SLAQQRGGAKGTRGASR 177
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
GAGE +L+L RRR+ + L ++E VR R+ QR + R G G A+VGYTN
Sbjct: 178 GAGEKKLELDRRRLKTEITKLKKEVERVRLQRSEQR--KTRLNGDKKIG----AIVGYTN 231
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG----KVLLSDTVGFISDLPLQLV 363
AGKS+L+ LS +++F++ +LFATLD + V L +G ++LL+DTVGF+S+LP QL+
Sbjct: 232 AGKSSLLKKLSGAEVFTEDKLFATLDAETRKVFLQTGEKNIQILLTDTVGFVSNLPHQLI 291
Query: 364 DAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
DAF +TLEE AD L+ V D P + E +VL ++ S+ K I NK+D
Sbjct: 292 DAFRSTLEEAALADFLIIVCDAAHPAMPECLEVTKKVLDELSCSD---KPSIIAINKMD 347
>sp|A6H294|HFLX_FLAPJ GTPase HflX OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC
49511) GN=hflX PE=3 SV=1
Length = 413
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 185/358 (51%), Gaps = 42/358 (11%)
Query: 84 ALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHI- 142
+ N EE+ Y D F VV+ S K + TF G G +E I ++
Sbjct: 16 GIVTQNQSEEKLKEYLDELEFLTFTAGGEVVKRFSQKMERPNPKTFLGTGKIEEINLYVL 75
Query: 143 -NGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAE 201
NG + I + L+ QQ+N+ + +LDR LI++IF A T A+ Q E
Sbjct: 76 ENG------ISTIVFDDELTPSQQKNISKIIDCKILDRTHLILDIFAQRAETSYARTQVE 129
Query: 202 LAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRI 261
LA +Y RL G T E R GG G + G GETE++ RR +
Sbjct: 130 LAQCIYLLPRL------SGMWTHLE-----------RQKGGIG-MRGPGETEIETDRRIV 171
Query: 262 LERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSD 321
+R + L +I+ + + +A QR R + VA+VGYTN GKSTL++A+ SD
Sbjct: 172 RDRIALLKEKIKIIDKQQATQRGNRG--------AMVRVALVGYTNVGKSTLMNAVGKSD 223
Query: 322 LFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVH 381
+F + +LFATLD ++ VV+ + LLSDTVGFI LP QLVD+F +TL+EV EADLL+H
Sbjct: 224 VFVENKLFATLDTTVRKVVIKNLPFLLSDTVGFIRKLPTQLVDSFKSTLDEVREADLLLH 283
Query: 382 VLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDI 439
V+D + + E+H V ++L + ++ K I V+NKID + ID DD+
Sbjct: 284 VVDISHQDFEDHIDAVNKILLDIKSAD---KPTIMVFNKIDAYKHLT-----IDADDL 333
>sp|Q9Z873|HFLX_CHLPN GTPase HflX OS=Chlamydia pneumoniae GN=hflX PE=1 SV=1
Length = 472
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 155/260 (59%), Gaps = 24/260 (9%)
Query: 164 QQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLT 223
QQRNLE+ G VLDR LI+EIF++ A T EA +Q +LA Y RL R+ G
Sbjct: 116 QQRNLEKRLGLVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKRLWGH----- 170
Query: 224 FGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQR 283
+S + G G GF+ G GE +++L RR + ER L +Q++ V + RA +R
Sbjct: 171 ---------LSRQKSGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERR 221
Query: 284 AARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS 343
+ R RG+ T A++GYTN+GKSTL++ L+ +D + + +LFATLDP+ + VLP
Sbjct: 222 KVKSR------RGIPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPG 275
Query: 344 GK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ 402
G+ VLL+DTVGFI LP LV AF +TLE D+L+HV+D + P EH T + Q
Sbjct: 276 GRHVLLTDTVGFIRKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQ 335
Query: 403 QVGVSEEKLKNMIEVWNKID 422
++ + + + +I V NK+D
Sbjct: 336 ELKIEKPR---IITVLNKVD 352
>sp|D3FTV4|HFLX_BACPE GTPase HflX OS=Bacillus pseudofirmus (strain OF4) GN=hflX PE=3 SV=1
Length = 423
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 173/311 (55%), Gaps = 32/311 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
VV + K K + T+ G G V+ + I E+ D + N L Q RNL
Sbjct: 44 VVGTITQKREKVESSTYVGKGKVQELVHLIEETEA----DLVIFNDELQASQMRNLHAEC 99
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
G V+DR LI++IF + A ++E KLQ ELA L Y RL +G+
Sbjct: 100 GIAVIDRTQLILDIFASRAKSREGKLQVELAQLKYLLPRL--------------SGQGLA 145
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+S +G G G G GET+L+ RR I R + + Q+E V R R R+++
Sbjct: 146 LSRQGGGIGT----RGPGETQLETDRRHIRRRMNEIERQLEAVVNHRVRYREKRKKNAA- 200
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
+A+VGYTNAGKSTL++ L+ +D + +LFATLDP + + LPSG VL+SDT
Sbjct: 201 -----IQLALVGYTNAGKSTLLNRLTKADTLEEDQLFATLDPTTRQLHLPSGFSVLMSDT 255
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFI DLP LV +F +TLEE+ EADLL+HV+DC+ P+ E+H TV+++++++ E
Sbjct: 256 VGFIQDLPTTLVASFRSTLEELKEADLLLHVVDCSHPDYEQHERTVIKLIEEL---EAHS 312
Query: 412 KNMIEVWNKID 422
+ ++NK D
Sbjct: 313 IPQLLIYNKAD 323
>sp|E0RQS7|HFLX_SPITD GTPase HflX OS=Spirochaeta thermophila (strain ATCC 49972 / DSM
6192 / RI 19.B1) GN=hflX PE=3 SV=1
Length = 408
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 163/295 (55%), Gaps = 31/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
FGPG E + A +G ++ + + L+ QQRN E V+DR +IIEIF+
Sbjct: 56 LFGPGQAEVVA---REARMRG-IELVVFDEDLTPAQQRNWEHLVKSRVMDRTEVIIEIFS 111
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
HA TK+A+LQ E A L Y L R+RG L R RG G RG G
Sbjct: 112 RHARTKQAQLQTEKARLEYL---LPRLRGAWSHLD------------RQRG-GARG-TRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GE +++L RR IL R + + ++E + R + R+ R G+ V++VGYTNA
Sbjct: 155 EGERQIELDRRMILSRLARIRREMEAIERHQTTTRSRRLE------AGIPRVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPS-GKVLLSDTVGFISDLPLQLVDAFH 367
GKS+L + L+ + R F TLD ++ ++P G+V++SDTVGFI LP LVDAFH
Sbjct: 209 GKSSLFTRLTGQAVRIQDRPFVTLDTTTRTCLIPGWGRVVVSDTVGFIQHLPHTLVDAFH 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATLEEV +A LL+ V+D ++PNL H +T +VL ++G I V+NK D
Sbjct: 269 ATLEEVRDAHLLLEVVDLSSPNLLLHLSTTEEVLTEIGAHH---IPRIRVYNKAD 320
>sp|Q0I442|HFLX_HAES1 GTPase HflX OS=Haemophilus somnus (strain 129Pt) GN=hflX PE=3 SV=1
Length = 458
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 173/313 (55%), Gaps = 38/313 (12%)
Query: 125 RADTFFGPGTVETIKCHINGAESKGELDA--IFVNAILSGIQQRNLERAWGKPVLDRVGL 182
+A F G G E I A++ +L+A + VN L+ Q RNLE V+DR GL
Sbjct: 78 QAKYFVGQGKAEEI------AQAVEQLNADIVLVNHSLTPAQARNLESICQCRVVDRTGL 131
Query: 183 IIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVR-GPDGRLTFGETGEAEVVSARGRGSG 241
I++IF A + E KLQ ELA L + +RLVR + G D + +G+
Sbjct: 132 ILDIFAQRARSHEGKLQVELAQLRHLATRLVRRKTGLDQQ----------------KGAV 175
Query: 242 GRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVA 301
G + G GET+L+ RR I R + L +++E+V + R R RR+ + T++
Sbjct: 176 G---LRGPGETQLETDRRLIKVRITQLQNRLEKVAKQRNQNRQTRRKAD------IPTIS 226
Query: 302 VVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSV-VLPSGKVLLSDTVGFISDLPL 360
+VGYTNAGKSTL + L+ ++++ +LFATLDP LK + + G +L+DTVGFI +LP
Sbjct: 227 LVGYTNAGKSTLFNVLTQANVYVADQLFATLDPTLKRLPIQDVGNCVLADTVGFIRELPH 286
Query: 361 QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNK 420
LV AF +TL+E EA LL+HV+D E+ TV +VL ++ ++ + V+NK
Sbjct: 287 DLVSAFKSTLQETTEASLLLHVIDVADSRKLENMLTVNEVLSEIKANQ---VTTLLVYNK 343
Query: 421 IDYHDEEMGDVEY 433
ID + +E+
Sbjct: 344 IDQVENIQPHIEF 356
>sp|Q04PB3|HFLX_LEPBJ GTPase HflX OS=Leptospira borgpetersenii serovar Hardjo-bovis
(strain JB197) GN=hflX PE=3 SV=2
Length = 462
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 201/403 (49%), Gaps = 74/403 (18%)
Query: 54 FNRDPDDPPRLFLVQPRLKPPTFLQAKLNEALCLANSLEEQRDGYFDTD-----FFDKEL 108
N + DD L+ V P+ P + L E L + + L + D F
Sbjct: 15 LNPESDD---LWSVLPKKYPGQLTEGILEEILEIESRLSRSKKNLKDAQKENRAFLVGVY 71
Query: 109 PPHVVVQNPSLKSGKAR----------ADTF------FGPGTVETIKCHINGAESKGELD 152
P V ++PSL + + DTF P TV KG+L+
Sbjct: 72 PERSVGRHPSLSMEELKELCRTAEVHVVDTFIQRKNRLDPSTVL----------GKGKLE 121
Query: 153 AIFVNAI------------LSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQA 200
I + AI L+ Q + + V+DR LI++IF +A +++ KLQ
Sbjct: 122 EIILKAIQKHVELLVFDLELTPSQAKKISDIADIKVIDRTQLILDIFARNAKSRDGKLQV 181
Query: 201 ELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRR 260
ELA L Y K RL + RLT G G GET+L++ +RR
Sbjct: 182 ELAQLKYLKGRLTELDDNMSRLTGGIGGRG------------------PGETKLEIGKRR 223
Query: 261 ILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDS 320
+ ER + L +++ +++ R + R R+R+ L V +VGYTNAGKST ++AL++S
Sbjct: 224 VEERITRLEVELKSLKKRREINRRQRKRNE------LPAVGIVGYTNAGKSTFLNALTNS 277
Query: 321 DLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLL 379
++ S+ +LFATLDP + + P + +++SDTVGFI DLP +L +AF ATLEE+ ++DLL
Sbjct: 278 EILSENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELGDSDLL 337
Query: 380 VHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
VHV+D + P+ + V ++L+++ +S MI+V+NKID
Sbjct: 338 VHVVDVSNPDYKLQMEAVEKILEELELSHIP---MIQVFNKID 377
>sp|Q3AFV0|HFLX_CARHZ GTPase HflX OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=hflX PE=3 SV=1
Length = 414
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 171/300 (57%), Gaps = 33/300 (11%)
Query: 128 TFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIF 187
T+FG G V+ I K L+ + V L+ Q +NLE V+DR +I+EIF
Sbjct: 49 TYFGYGKVQ----EIGELLKKHNLNLLAVGGDLTPTQAKNLEEILEVTVVDRTQIILEIF 104
Query: 188 NAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFIS 247
HAHT E K+Q ELA LMY R+ TG V+S G G G
Sbjct: 105 AEHAHTHEGKIQVELARLMYNLPRI--------------TGLGRVLSRLGGGIGT----R 146
Query: 248 GAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTN 307
G GET+L++ RR I +R + L +++E+ + R V+R+ R G + VA+VGYTN
Sbjct: 147 GPGETKLEVLRRTIRKRIAELRRELKEIEQNRKVKRSRRLEAG------VPIVALVGYTN 200
Query: 308 AGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAF 366
AGKSTL++AL+ + + ++ +LFATLDP ++ + LP G K+LL DTVGFI ++P + +AF
Sbjct: 201 AGKSTLLNALTGAGVLAEDKLFATLDPTVRKLTLPGGQKLLLIDTVGFIENMPPLIKEAF 260
Query: 367 HATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDE 426
+TLE V EA+L++HV+D P EE V ++L ++ V +I V+NK+D E
Sbjct: 261 KSTLEVVHEAELILHVVDGANPYREEQEAVVEKILTEMKVR----VPVITVYNKVDLLPE 316
>sp|P94478|HFLX_BACSU GTPase HflX OS=Bacillus subtilis (strain 168) GN=hflX PE=3 SV=2
Length = 420
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 174/311 (55%), Gaps = 32/311 (10%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAW 172
V+ + + K +A A T+ G G VE +K + E+ D + N LS Q ++L A
Sbjct: 44 VLTSVTQKRNRADAATYIGKGKVEELKALVEELEA----DLLIFNDELSPSQLKSLATAI 99
Query: 173 GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEV 232
++DR LI++IF A T+E KLQ ELA L Y RL TG+
Sbjct: 100 EVKMIDRTQLILDIFAKRARTREGKLQIELAQLQYALPRL--------------TGQGIN 145
Query: 233 VSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGS 292
+S +G G G G GET+L+ RR I R + +Q+ V R R+ R R+++G
Sbjct: 146 LSRQGGGIGA----RGPGETKLETDRRHIRNRIHEINTQLSTVIRHRSRYRERRKKNG-- 199
Query: 293 DGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDT 351
+ +A+VGYTNAGKST + L+ +D + + LFATLDP + +VLPSG VLLSDT
Sbjct: 200 ----VLQIALVGYTNAGKSTWFNRLTSADSYEEDLLFATLDPMTRKMVLPSGYSVLLSDT 255
Query: 352 VGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL 411
VGFI DLP L+ AF +TLEEV EADL++H++D + + H TVL++L+++ +
Sbjct: 256 VGFIQDLPTTLIAAFRSTLEEVKEADLILHLIDSSNEDYAGHEKTVLRLLEELEADD--- 312
Query: 412 KNMIEVWNKID 422
M+ +NK D
Sbjct: 313 IPMLTAYNKRD 323
>sp|O43824|GTPB6_HUMAN Putative GTP-binding protein 6 OS=Homo sapiens GN=GTPBP6 PE=2 SV=3
Length = 516
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 169/313 (53%), Gaps = 30/313 (9%)
Query: 113 VVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQQRNLERA 171
VVQ + + FG G E + I G+ ++ +F+N ++ ++ LE A
Sbjct: 136 VVQTMVVSTKTPDRKLIFGKGNFEHLTEKIRGSP---DVTCVFLNVERMAAPTKKELEAA 192
Query: 172 WGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAE 231
WG V DR +++ IF +A TKEA+LQ LA + +S L R
Sbjct: 193 WGVEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLKRD---------------- 236
Query: 232 VVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGG 291
V+ RG G R +I G+GE+ +QLQ+R + E+ + + ++ +R+ R + R R R
Sbjct: 237 -VAHLYRGVGSR-YIMGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTR--- 291
Query: 292 SDGRGLATVAVVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPS-GKVLLS 349
R ++VVGYTN GK+TL+ AL+ D+ + +LFATLD + LPS VL
Sbjct: 292 ---REFPVISVVGYTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYV 348
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEE 409
DT+GF+S LP L+++F ATLE+V +DL++HV D + P E + +VL L+ + +
Sbjct: 349 DTIGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAP 408
Query: 410 KLKNMIEVWNKID 422
L +M+EV NK+D
Sbjct: 409 LLDSMVEVHNKVD 421
>sp|P25519|HFLX_ECOLI GTPase HflX OS=Escherichia coli (strain K12) GN=hflX PE=1 SV=3
Length = 426
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 163/295 (55%), Gaps = 32/295 (10%)
Query: 129 FFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFN 188
F G G I ++ G +F +A LS Q+RNLER V+DR GLI++IF
Sbjct: 57 FVGEGKAVEIA---EAVKATGASVVLFDHA-LSPAQERNLERLCECRVIDRTGLILDIFA 112
Query: 189 AHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISG 248
A T E KLQ ELA L + +RLVR G T R GG G + G
Sbjct: 113 QRARTHEGKLQVELAQLRHLATRLVR----------GWTHLE-------RQKGGIG-LRG 154
Query: 249 AGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNA 308
GET+L+ RR + R + S++E V + R R +R + + TV++VGYTNA
Sbjct: 155 PGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKAD------VPTVSLVGYTNA 208
Query: 309 GKSTLVSALSDSDLFSDARLFATLDPRLKSV-VLPSGKVLLSDTVGFISDLPLQLVDAFH 367
GKSTL + ++++ +++ +LFATLDP L+ + V G+ +L+DTVGFI LP LV AF
Sbjct: 209 GKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFK 268
Query: 368 ATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
ATL+E +A LL+HV+D ++E+ V VL+++ E + ++ V NKID
Sbjct: 269 ATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE--IPTLL-VMNKID 320
>sp|Q5JGB4|HFLX_PYRKO GTPase HflX OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM
12380 / KOD1) GN=hflX PE=3 SV=1
Length = 442
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 161/303 (53%), Gaps = 42/303 (13%)
Query: 130 FGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNA 189
GPG +E +K + E K + IF N L+ Q NL + ++DR L++EIF
Sbjct: 47 IGPGKLEELKELVK--ELKPD-KVIFANR-LTPSQAYNLWKELRIEIMDRWQLVLEIFEK 102
Query: 190 HAHTKEAKLQAELAALMYK----KSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGF 245
AH+KEAKLQ ELA+L Y+ K + R+R G R
Sbjct: 103 RAHSKEAKLQVELASLQYEIPLVKEAIRRIR-----------------------LGDRAG 139
Query: 246 ISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGY 305
G GE + Q + I R + ++E V+ R V+R R + G VA+ GY
Sbjct: 140 FKGMGEYQTQQYLKHIRYRMGKIRDELERVKADREVKRKKR------ENAGFVLVALAGY 193
Query: 306 TNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDA 365
TNAGKSTL++AL+D ++ + ++F TLD + L + ++L +DTVGFI LP +V+A
Sbjct: 194 TNAGKSTLLNALADENVEAKNQMFTTLDTTTRRFRLGTKRILATDTVGFIDGLPPFIVEA 253
Query: 366 FHATLEEVVEADLLVHVLDCTAPNLEEHRTTV--LQVLQQVGVSEEKLKNMIEVWNKIDY 423
FH+TLEE+V+AD+++ VLD + P E R + LQVL+++ E K +I NKID
Sbjct: 254 FHSTLEEIVKADIVLLVLDSSEPWGEIRRKFLASLQVLRELKALE---KPIIVALNKIDL 310
Query: 424 HDE 426
+E
Sbjct: 311 IEE 313
>sp|A9H253|HFLX_GLUDA GTPase HflX OS=Gluconacetobacter diazotrophicus (strain ATCC 49037
/ DSM 5601 / PAl5) GN=hflX PE=3 SV=2
Length = 450
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 151/274 (55%), Gaps = 36/274 (13%)
Query: 154 IFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLV 213
+ V+ LS Q RNLERA G VLDR G+I+EIF+ HA+T+EA+LQ E+A L Y RL
Sbjct: 116 VIVDHELSPSQIRNLERATGAQVLDRTGVIVEIFHRHANTREARLQVEMARLKYVAPRL- 174
Query: 214 RVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIE 273
E+ GAGE+ L L RR+I +R + L +Q++
Sbjct: 175 -----------RESSGGGGRQQ----------GPGAGESTLALDRRKIRDRLAELKTQLD 213
Query: 274 EVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLD 333
V+R +R+ARR VA+VGYTNAGKS+L+ AL+ S + + +LFATLD
Sbjct: 214 AVQRDGDQRRSARRDQ--------LRVALVGYTNAGKSSLMRALTGSQVLVEDKLFATLD 265
Query: 334 PRLKSVVLPSG--KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLE 391
++ ++ P ++L+SDTVGFI LP LV +F +TL E +EA LL+ V+D + P E
Sbjct: 266 TTVR-ILQPETRPRILVSDTVGFIKQLPHDLVASFRSTLAEALEASLLLFVVDASDPTYE 324
Query: 392 EHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHD 425
VL+++G + V NK+D D
Sbjct: 325 SQLEVTRGVLREIGADAVPSRL---VLNKMDRLD 355
>sp|B2UPE7|HFLX_AKKM8 GTPase HflX OS=Akkermansia muciniphila (strain ATCC BAA-835)
GN=hflX PE=3 SV=1
Length = 437
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 153/277 (55%), Gaps = 20/277 (7%)
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D + + +LS QQR ER + V+DR +I++IF A T+EA LQ ELA + Y R
Sbjct: 82 DCVVFDNMLSPSQQREWERLVDECVIDREEVILDIFARRARTREATLQVELARMQYSLPR 141
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
+ R+ R G G A G GE ++++ RR R + +
Sbjct: 142 MARMWNHLDRQGGGSGGGKGGGGAA----------RGEGEKQIEVDRRLARARIEAIQRE 191
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
+ V R RA QR R R +AT A+VGYTNAGKS+L+S +S S++ + LFAT
Sbjct: 192 LVLVTRQRATQRKERERQA------VATAAIVGYTNAGKSSLLSLVSGSEVMARDMLFAT 245
Query: 332 LDPRLKSVVLPSGK-VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNL 390
LD + + LP G+ +LL+DTVGFI +LP +LV+AF +TLEE V AD L+ V+D + P
Sbjct: 246 LDTTTRKIELPHGQPLLLTDTVGFIRNLPHRLVEAFKSTLEEAVLADFLIQVVDASDPEA 305
Query: 391 EEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
H T L+VL ++G + K MI V NK+D EE
Sbjct: 306 VRHYETTLEVLNELGAGD---KPMIVVLNKVDLVPEE 339
>sp|Q3U6U5|GTPB6_MOUSE Putative GTP-binding protein 6 OS=Mus musculus GN=Gtpbp6 PE=2 SV=1
Length = 514
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 172/320 (53%), Gaps = 29/320 (9%)
Query: 106 KELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNA-ILSGIQ 164
+ LP V + S + FG G + + I G + ++ ++F+N ++
Sbjct: 118 RALPGWSVASTLVVPSAAPGSRLVFGKGNFQDVTEKIKGCQ---DITSVFLNVERMAPPT 174
Query: 165 QRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTF 224
++ LE AWG V DR L++ IF +A T+EA++Q LA + +S +
Sbjct: 175 KKELESAWGLRVFDRFTLVLHIFRCNARTREARMQLALAEIPLLRSSV-----------N 223
Query: 225 GETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRA 284
++G+ + +G G R +I G+GE+ +L+ R + +R L +E +R R + R
Sbjct: 224 TDSGQQD-----QQGWGSR-YIMGSGESPTELRARALRDRELRLRRVLERLRDKRRLMRK 277
Query: 285 ARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALS-DSDLFSDARLFATLDPRLKSVVLPS 343
R R R V+VVGYTN GK+TL+ AL+ ++ L + FATLD + + +LPS
Sbjct: 278 ERVR------REFPVVSVVGYTNCGKTTLIQALTGEAALQPRDQPFATLDVTVHAGLLPS 331
Query: 344 G-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQ 402
++L DT+GF+S LP L+ AF ATLE+V +D+LVHV D + P+ E + TVL L+
Sbjct: 332 RLRILYVDTIGFLSQLPHNLIHAFSATLEDVAYSDVLVHVTDVSHPDAELQKATVLSTLR 391
Query: 403 QVGVSEEKLKNMIEVWNKID 422
+ + L++ +EV +K+D
Sbjct: 392 GLHLPPALLESALEVHSKVD 411
>sp|Q980M3|HFLX_SULSO GTPase HflX OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM
1617 / JCM 11322 / P2) GN=hflX PE=1 SV=1
Length = 356
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 142/259 (54%), Gaps = 31/259 (11%)
Query: 167 NLERAW-GKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFG 225
N+ R GK VLD++ L++EIF HA +KEAK+Q ELA L Y+ P + T+
Sbjct: 73 NIRRELKGKEVLDKILLLLEIFALHAGSKEAKMQIELARLKYEL--------PIIKETYT 124
Query: 226 ETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAA 285
++ E G G+ G E+ ++ +RRI + L+ ++E ++ + +
Sbjct: 125 KSKIGEQQGPLGAGTYGV-------ESTIKFYKRRI----NKLMKELESIKIFKEKSIES 173
Query: 286 RRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK 345
+R+ + ++ +VGYTN+GK++L ++L+ D +LF T+ P+ ++ + + K
Sbjct: 174 NKRNN------IPSIGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRK 227
Query: 346 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN--LEEHRTTVLQVLQQ 403
++L DTVGFI +P Q+VDAF TL E +D L+ V+D T L E + ++L++
Sbjct: 228 IMLVDTVGFIRGIPPQIVDAFFVTLSEAKYSDALILVIDSTFSENLLIETLQSSFEILRE 287
Query: 404 VGVSEEKLKNMIEVWNKID 422
+GVS K ++ NKID
Sbjct: 288 IGVSG---KPILVTLNKID 303
>sp|A1RY30|HFLX_THEPD GTPase HflX OS=Thermofilum pendens (strain Hrk 5) GN=hflX PE=3 SV=1
Length = 424
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 150/295 (50%), Gaps = 34/295 (11%)
Query: 130 FGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNA 189
G G V +K + E K L +F+N L Q NL + G V+DR LI+EIF
Sbjct: 55 IGRGKVLELKRLV---EEKKPLKVVFLND-LKPNQAYNLSKETGVEVIDRYELILEIFAK 110
Query: 190 HAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGA 249
A ++E+KLQ ELA L + L+F + E ++ RG GF+ G
Sbjct: 111 RAGSRESKLQIELAKLKRE-------------LSFAK----EYINLAKRGEL-HGFL-GG 151
Query: 250 GETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAG 309
G+ + + R S + ++ ++R+ + +R ARR G L TVA+ GYT AG
Sbjct: 152 GKYAVDAYYAYVSMRISKIEEELRKIRKMKE-ERIARRVEAG-----LYTVALTGYTGAG 205
Query: 310 KSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHAT 369
K+TL + L+ + + D + FATL + VL++DT+GFI DLP LVDAF+ T
Sbjct: 206 KTTLFNVLTGENGYIDGKPFATLSTLSRRTYFHGFPVLVTDTIGFIDDLPDALVDAFYTT 265
Query: 370 LEEVVEADLLVHVLDC--TAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
L E + AD+++ VLD T + T ++VL +GV + ++ V NKID
Sbjct: 266 LRETLAADVILLVLDVSDTPAEIRRKLTASMEVLLNLGVPPTR---ILLVGNKID 317
>sp|Q58526|HFLX_METJA GTPase HflX OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=hflX PE=3
SV=1
Length = 402
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 177/340 (52%), Gaps = 52/340 (15%)
Query: 94 QRDGYFDTDFFD--KELPPHVVVQNPS---LKSGKARADTFFGPGTVETIKCHINGAESK 148
++D FD + KEL V+ NP ++ KA G G VE I +I +
Sbjct: 5 RKDSKFDRKSIEELKELAE--VLYNPVKTIVQIRKADPKYQIGSGLVERIAENI----KE 58
Query: 149 GELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYK 208
++ + V IL+ Q+ NL + + V+D++ L++ IF HA TKEA+LQ LA L Y+
Sbjct: 59 ENIEIVIVGNILTPSQKYNLAKKFKVEVIDKIELVLRIFYKHARTKEAQLQVRLAELQYE 118
Query: 209 KSRLVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHL 268
L R R ++ + GE GF G G+ E++ +++ + +
Sbjct: 119 ---LPRARE---KVRLAKMGEQP------------GF-GGYGDYEVEKYYQKVKREIATI 159
Query: 269 LSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARL 328
++E++R R V R R + TV ++GYTNAGK++L++AL+ + S ++
Sbjct: 160 KRKLEKLREHRRVARKGRAKFD--------TVGLIGYTNAGKTSLLNALTGENKESKNQV 211
Query: 329 FATLDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAP 388
F TL +++ K+L++DTVGFI DLP +++AF +T+EE ++DL++ V+D +
Sbjct: 212 FTTLTTTTRAIKGIKRKILVTDTVGFIDDLPPFMIEAFLSTIEESADSDLILIVVDAS-D 270
Query: 389 NLEEHRTTVLQVLQQVGVSEEKLKN------MIEVWNKID 422
++EE + +++ V+ E L +I V+NK+D
Sbjct: 271 DIEE-------IKRKLKVNHEILSKINCKAPIITVFNKVD 303
>sp|A9A623|HFLX_NITMS GTPase HflX OS=Nitrosopumilus maritimus (strain SCM1) GN=hflX PE=3
SV=1
Length = 371
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 142/273 (52%), Gaps = 30/273 (10%)
Query: 152 DAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSR 211
D I + +L Q NL A + +LDR LI+EIF + A + E+KLQ +LA L Y+ +R
Sbjct: 63 DVIVFDEVLKPSQNYNLAAALHREILDREALILEIFESRASSAESKLQVKLAQLRYEMAR 122
Query: 212 LVRVRGPDGRLTFGETGEAEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQ 271
++ GE GF+ G G+ E+ + I R + + S+
Sbjct: 123 ------AKEKVRLSSMGEQP------------GFM-GIGKFEVDVYYNDIKHRMNTVRSK 163
Query: 272 IEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFAT 331
+E+ + R + R R+R G T+++ GYT+AGK+TL + ++ + LF T
Sbjct: 164 LEKAGKQRELHRQGRKRMG------FKTISLAGYTSAGKTTLFNMMTGETRDQSSELFTT 217
Query: 332 LDPRLKSVVLPSGKVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDC--TAPN 389
L + V + L+SDTVGFIS LP ++DAF +TLEE+ D+++ V+D +
Sbjct: 218 LSTTTRRVSINQEPFLISDTVGFISKLPAYMIDAFKSTLEELGHTDIIIVVIDIGDSIFE 277
Query: 390 LEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKID 422
L++ ++ ++ L ++GV +++ M+ NK D
Sbjct: 278 LKKKFSSCMRTLSELGVEKDR---MVYALNKSD 307
>sp|A2BLW4|HFLX_HYPBU GTPase HflX OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
GN=hflX PE=3 SV=1
Length = 375
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 143/265 (53%), Gaps = 32/265 (12%)
Query: 170 RAWGKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYKKSRLVRVRGPDGRLTFGETGE 229
+A G +DR LI+EIF+ HA ++EAKLQ ELA L ++ LVR E
Sbjct: 91 KATGVNTIDRTMLILEIFSLHAGSREAKLQIELARLRHELP-LVR--------------E 135
Query: 230 AEVVSARGRGSGGRGFISGAGETELQLQRRRILERRSHLLSQIEEVRRTRAVQRAARRRH 289
A +S G F+ G G + R ++ R + + ++ E+RR ++R+ RR
Sbjct: 136 AIRLSKLKELPG---FL-GPGGYAIDAYYRYMVSRIAKIKRELRELRRRHEIERSKRR-- 189
Query: 290 GGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLS 349
GL +A+VGY +AGK++L +A++ F T+ P+ +++ + +
Sbjct: 190 ----SAGLPHIAIVGYASAGKTSLFNAITGLQKPVGPEYFTTITPKRRAISFNGLRTVFI 245
Query: 350 DTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN--LEEHRTTVLQVLQQVGVS 407
DTVGFI +P ++++AFH+TLEE AD++++V+D + P+ + E LQ L+++GV
Sbjct: 246 DTVGFIMRIPPEIIEAFHSTLEEAATADVILYVVDVSEPDTVIAEKLDEGLQTLRRIGVI 305
Query: 408 EEKLKNMIEVWNKIDYHDEEMGDVE 432
+ K +I NKID +E D+E
Sbjct: 306 D---KPLIIAANKIDLVPQE--DIE 325
>sp|B1XN32|OBG_SYNP2 GTPase obg OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
PR-6) GN=obg PE=3 SV=1
Length = 354
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFI 355
LA V ++G NAGKSTL+SALS + A F TL P L V P+G + +D G I
Sbjct: 159 LAEVGIIGLPNAGKSTLISALSAARPKIGAYPFTTLIPNLGVVKRPTGDGTVFADIPGLI 218
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI 415
Q V H L + +LVH++D A + ++ T+ L+ G +L +I
Sbjct: 219 EG-AHQGVGLGHEFLRHIERTKVLVHLVDLNAEDPIKNYETIQGELEAYGRGLPELPQII 277
Query: 416 EVWNKIDYHDEEMGD 430
+ NK+D D E D
Sbjct: 278 AL-NKLDAGDHEFAD 291
>sp|B0JI21|OBG_MICAN GTPase obg OS=Microcystis aeruginosa (strain NIES-843) GN=obg PE=3
SV=1
Length = 342
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 287 RRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-K 345
+RH + + LA V ++G NAGKSTL+SA+S + F TL P L V P+G
Sbjct: 149 KRHLRLELKLLAEVGIIGLPNAGKSTLISAVSSARPKIADYPFTTLIPNLGVVRKPTGDG 208
Query: 346 VLLSDTVGFISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVG 405
+ +D G I L + H L + LL+H++ T+ + + L G
Sbjct: 209 TVFADIPGLIEGAHLG-IGLGHEFLRHIERTRLLIHLVSLTSEDPIADYQIIQGELAAYG 267
Query: 406 VSEEKLKNMIEVWNKIDYHDEEMGDVEYIDGDDISNFSRAEDKDTTSEPVDVECIDNYG 464
EK ++ I V+NKID DEE I N+ + K T +E + + + G
Sbjct: 268 RGLEK-RSQILVFNKIDAVDEET----------IDNYQKQFAKITNAEILTISAVTGAG 315
>sp|P72931|OBG_SYNY3 GTPase obg OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=obg
PE=3 SV=1
Length = 368
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFI 355
LA V ++G NAGKSTL++ALS + F TL P L V P+G + +D G I
Sbjct: 159 LAEVGIIGLPNAGKSTLIAALSAARPKIADYPFTTLVPNLGVVRKPTGDGTVFADIPGLI 218
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV--GVSEEKLKN 413
+ H L + LL+HVLD TA + + + Q L G++E K
Sbjct: 219 EGAAAG-IGLGHEFLRHIERTRLLLHVLDVTAGDPIANFRVIQQELDAYGRGITE---KP 274
Query: 414 MIEVWNKIDYHDEEM-GDVEYIDGDDISNFSRA 445
I NKID D EM G++E ++ FS A
Sbjct: 275 QIIALNKIDALDGEMIGEIE----TELKRFSTA 303
>sp|Q2JJ90|OBG_SYNJB GTPase obg OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=obg
PE=3 SV=1
Length = 347
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 95/228 (41%), Gaps = 36/228 (15%)
Query: 211 RLVRVRGPDGRLTF-GETGEA---------EVVSARGRGSGGRGFISGAGETELQLQRRR 260
RLVRV P G + F ETGE +++ ARG G GG G
Sbjct: 86 RLVRV--PCGTVVFNAETGELLGDLVGKGDQLLVARG-GKGGLG---------------- 126
Query: 261 ILERRSHLLSQIEEVRRTRAVQRAARRRHGGSDGRGLATVAVVGYTNAGKSTLVSALSDS 320
+H LS R A R + + +A V +VG NAGKSTL+S +S +
Sbjct: 127 ----NAHFLSNHNRAPRQFTKGEAGERVRLRLELKLIAEVGIVGLPNAGKSTLISVVSSA 182
Query: 321 DLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFISDLPLQLVDAFHATLEEVVEADLL 379
F TL P L V PSG V+ +D G I L V H L V +L
Sbjct: 183 RPKIADYPFTTLQPNLGVVPHPSGDGVVFADIPGLIEGAHLG-VGLGHEFLRHVERTRVL 241
Query: 380 VHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
+H++D TA + + + Q L+ G K I V NKID D +
Sbjct: 242 IHLVDGTAADPVKDYQVIQQELRAYGHGLID-KPQILVLNKIDVLDPQ 288
>sp|Q165Y6|OBG_ROSDO GTPase obg OS=Roseobacter denitrificans (strain ATCC 33942 / OCh
114) GN=obg PE=3 SV=1
Length = 344
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 280 AVQRAARRRHGGSDG---------RGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFA 330
+ +A RR + G DG + +A V ++G NAGKST ++A S++ F
Sbjct: 133 STNQAPRRSNPGQDGVERTLWLRLKLIADVGLLGLPNAGKSTFLAATSNARPKIADYPFT 192
Query: 331 TLDPRLKSVVLPSGKVLLSDTVGFISDLP--LQLVDAFHATLEEVVEADLLVHVLDCTAP 388
TL P L V + + + +++D G I L D F +E +L+H+ D T+
Sbjct: 193 TLHPNLGVVGVDNTEFVVADIPGLIEGASEGRGLGDLFLGHIERCA---VLLHLFDGTSE 249
Query: 389 NLEEHRTTVLQVLQQVGVSEEKLKNMIEVWNKIDYHDEE 427
L E T++ L+ GV K I V NKID DEE
Sbjct: 250 TLIEDYHTIIGELEAYGVGLAD-KPRITVLNKIDALDEE 287
>sp|B0CDA2|OBG_ACAM1 GTPase obg OS=Acaryochloris marina (strain MBIC 11017) GN=obg PE=3
SV=1
Length = 350
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFI 355
LA V ++G NAGKSTL+S LS + F TL P L V +G + +D G I
Sbjct: 159 LAEVGIIGLPNAGKSTLISVLSAARPKIADYPFTTLIPNLGVVPRATGDGTVFADIPGLI 218
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI 415
+ V H L V LLVH++D TA + E+ T+ + L G + ++
Sbjct: 219 EG-AHEGVGLGHDFLRHVERTRLLVHLVDATAEDPEQDYQTIQKELSAYGQGLQNRPQLL 277
Query: 416 EVWNKIDYHDEE 427
V NKID D E
Sbjct: 278 -VLNKIDAMDSE 288
>sp|B2IYX1|OBG_NOSP7 GTPase obg OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
GN=obg PE=3 SV=1
Length = 342
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFIS 356
LA V ++G NAGKSTL+S+LS + F TL P L V P+G TV +
Sbjct: 159 LAEVGIIGLPNAGKSTLISSLSAARPKIADYPFTTLIPNLGVVRKPTG----DGTV--FA 212
Query: 357 DLPLQLVDAFHAT------LEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEK 410
D+P + A H L + +L+H++D T+ ++ T+ + LQ G +
Sbjct: 213 DIPGLIAGASHGAGLGHDFLRHIERTRVLLHLIDATSDDVIRDYNTIKEELQAYGQGLAE 272
Query: 411 LKNMIEVWNKIDYHDEEMGDVEYI 434
+ I NKID D E D+E +
Sbjct: 273 -RPQILALNKIDAVDRETVDLEAL 295
>sp|Q2JS78|OBG_SYNJA GTPase obg OS=Synechococcus sp. (strain JA-3-3Ab) GN=obg PE=3 SV=1
Length = 385
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFI 355
+A V +VG NAGKSTL+S +S + F TL P L V P+G V+ +D G I
Sbjct: 159 IAEVGIVGMPNAGKSTLISVVSSARPKIADYPFTTLQPNLGVVPHPAGDGVVFADIPGLI 218
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI 415
+ V H L V +L+H++D TA + + Q L+ G K I
Sbjct: 219 EGA-HRGVGLGHDFLRHVERTRVLIHLVDGTAADPVRDYQIIQQELRAYGHGLSD-KPQI 276
Query: 416 EVWNKID 422
V NKID
Sbjct: 277 VVLNKID 283
>sp|B7JVH9|OBG_CYAP8 GTPase obg OS=Cyanothece sp. (strain PCC 8801) GN=obg PE=3 SV=1
Length = 329
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFI 355
LA V ++G NAGKSTL+++LS + F TL P L V P+G + +D G I
Sbjct: 159 LAEVGIIGLPNAGKSTLMASLSAARPKIADYPFTTLVPNLGVVRKPTGDGTVFADIPGLI 218
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI 415
+ + H L + LL+H++D T+P+ + + Q L+ G +I
Sbjct: 219 EG-AHEGIGLGHEFLRHIERTRLLLHLVDITSPDPVKDYQIIQQELEAYGRGLSDRPQII 277
Query: 416 EVWNKIDYHDEE 427
+ NK+D DEE
Sbjct: 278 AL-NKMDAADEE 288
>sp|B8HU67|OBG_CYAP4 GTPase obg OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=obg
PE=3 SV=1
Length = 359
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFI 355
LA V ++G NAGKSTL+S LS + F TL P L V P+G V+ +D G I
Sbjct: 159 LAEVGIIGLPNAGKSTLISVLSAARPKIADYPFTTLVPNLGVVRPPNGDGVVFADIPGLI 218
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI 415
+ Q + H L + LL+H++D TA + T+ L+ G + I
Sbjct: 219 AG-AHQGIGLGHDFLRHIERTRLLIHLIDSTAEDPLRDYVTIQTELEAYGHGLSD-RPQI 276
Query: 416 EVWNKID 422
V NKID
Sbjct: 277 VVLNKID 283
>sp|B3CQ33|OBG_ORITI GTPase obg OS=Orientia tsutsugamushi (strain Ikeda) GN=obg PE=3
SV=1
Length = 329
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFIS 356
L+ V +VG NAGKST +SA++ + F TL P L V + + +++D G I+
Sbjct: 159 LSDVGLVGLPNAGKSTFLSAITSAKPKIADYPFTTLTPNLGVVYINNNSFVVADIPGLIA 218
Query: 357 DLPL--QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
L L D F L+ + ++VH+LD TA NL ++ T+ L +S + K
Sbjct: 219 GAHLGQGLGDKF---LKHIERCRIIVHLLDITAENLLQNYYTIRDELSSYSLSLKD-KTE 274
Query: 415 IEVWNKIDYHDEEM 428
I + K D E+
Sbjct: 275 ILCFTKTDTQSNEV 288
>sp|A5CDM6|OBG_ORITB GTPase obg OS=Orientia tsutsugamushi (strain Boryong) GN=obg PE=3
SV=1
Length = 329
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFIS 356
L+ V +VG NAGKST +SA++ + F TL P L V + + +++D G I+
Sbjct: 159 LSDVGLVGLPNAGKSTFLSAITSAKPKIADYPFTTLTPNLGVVYINNNSFVVADIPGLIA 218
Query: 357 DLPL--QLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
L L D F L+ + ++VH+LD TA NL ++ T+ L +S + K
Sbjct: 219 GAHLGQGLGDKF---LKHIERCRIIVHLLDITAENLLQNYYTIRDELSSYSLSLKD-KTE 274
Query: 415 IEVWNKIDYHDEEM 428
I + K D E+
Sbjct: 275 ILCFTKTDTQSNEV 288
>sp|P47624|OBG_MYCGE GTPase obg OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 /
NCTC 10195) GN=obg PE=3 SV=1
Length = 433
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 295 RGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGF 354
+ LA V +VG+ N+GKSTL+S LS++ F TL P L V + ++ +D G
Sbjct: 157 KYLANVGIVGFPNSGKSTLISKLSNAKPKIANYRFTTLIPVLGVVKYQNNSLVFADIPGL 216
Query: 355 ISDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL--K 412
I + + H L + ++L+H++ + ++ LQ++ ++ L K
Sbjct: 217 IENAS-EGSGLGHDFLRHIERCEILIHLISLDPVDNDDPCKAYLQIMDELSKYSPLLVKK 275
Query: 413 NMIEVWNKIDYHDEE 427
M+ V NKID ++ E
Sbjct: 276 KMLVVANKIDVNEGE 290
>sp|B9DNE7|OBG_STACT GTPase obg OS=Staphylococcus carnosus (strain TM300) GN=obg PE=3
SV=1
Length = 430
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFI 355
LA V +VG+ + GKSTL+S +S + A F T+ P L V P G+ +L+D G I
Sbjct: 158 LADVGLVGFPSVGKSTLLSVVSKAKPKIGAYHFTTIKPNLGVVSTPDGRSFVLADLPGLI 217
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPN----LEEHRTTVLQVLQQVGVSEEKL 411
+ V H L V ++VHV+D + LE+++ T+ + L+ G E
Sbjct: 218 EGAS-EGVGLGHQFLRHVERTKVIVHVIDMSGSEGRDPLEDYK-TINKELESYGQHLED- 274
Query: 412 KNMIEVWNKIDYHDEE 427
+ I V NK+D D E
Sbjct: 275 RPQIVVANKMDLLDAE 290
>sp|B8FM68|OBG_DESAA GTPase obg OS=Desulfatibacillum alkenivorans (strain AK-01) GN=obg
PE=3 SV=1
Length = 336
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGK-VLLSDTVGFIS 356
A V +VG NAGKS+L++AL+ + A F TL P L + P G+ V+++D G I
Sbjct: 160 ADVGLVGLPNAGKSSLITALTAARPKIGAYPFTTLAPSLGVLQDPYGEPVVIADIPGLIE 219
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKL--KNM 414
Q H L + LL+H++D + E+ + + +++ ++ L K
Sbjct: 220 G-AAQGAGLGHRFLRHIERNRLLIHLIDASQVTAEDPLASYQAINKELSSYDQALGEKPQ 278
Query: 415 IEVWNKIDYHDEEMG 429
I V NK+D + E G
Sbjct: 279 IVVLNKMDLPEAEEG 293
>sp|Q8YQT0|OBG_NOSS1 GTPase obg OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=obg PE=3
SV=1
Length = 342
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFIS 356
A V ++G NAGKSTL+S+LS + F TL P L V P+G + +D G I
Sbjct: 160 AEVGIIGLPNAGKSTLISSLSAARPKIADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIE 219
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVS-EEKLKNMI 415
H L + +L+H++D T+ ++ T+ Q LQ G E+++ I
Sbjct: 220 G-AADGAGLGHDFLRHIERTRVLLHLIDATSDDVIRDYNTIEQELQAYGRGLNERMQ--I 276
Query: 416 EVWNKIDYHDEEMGDVEYI 434
NKID D E D+E +
Sbjct: 277 LALNKIDAVDRETVDLEAL 295
>sp|Q10XA1|OBG_TRIEI GTPase obg OS=Trichodesmium erythraeum (strain IMS101) GN=obg PE=3
SV=1
Length = 352
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFI 355
LA V ++G NAGKSTL++ALS + F TL P L V P+G + +D G I
Sbjct: 159 LAEVGIIGLPNAGKSTLIAALSAARPKIADYPFTTLVPNLGVVRKPTGDGTVFADIPGLI 218
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNMI 415
L H L + LL+H++D T + E+ T+ L+ G S E K +
Sbjct: 219 EGASAGL-GLGHEFLRHIERTRLLLHLVDITDVDPVENFETIQNELEVYGRSLED-KRQV 276
Query: 416 EVWNKIDYHDEEMGDVE 432
NK+D D + +++
Sbjct: 277 LALNKVDAVDVKGAEIQ 293
>sp|Q3YRX8|OBG_EHRCJ GTPase obg OS=Ehrlichia canis (strain Jake) GN=obg PE=3 SV=1
Length = 340
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 10/135 (7%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFI- 355
++ V ++G NAGKS+ +++ ++S F TL+P L + + +++L+D G I
Sbjct: 158 ISDVGIIGLPNAGKSSFLASCTNSKTKIADYPFTTLEPHLGVAFIDNTELVLADIPGLIP 217
Query: 356 -SDLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+ L + D F L+ + +L+H++DCT N+ E + +++ ++L N
Sbjct: 218 GAHLGHGIGDKF---LKHIERCSILLHIIDCTLDNIIESYEC---IRKELSFYNKELSNK 271
Query: 415 IE--VWNKIDYHDEE 427
E V NK D D++
Sbjct: 272 TEFIVLNKSDLLDKK 286
>sp|Q8EWL0|OBG_MYCPE GTPase obg OS=Mycoplasma penetrans (strain HF-2) GN=obg PE=3 SV=1
Length = 429
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 15/139 (10%)
Query: 295 RGLATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGF 354
+ +A V ++G NAGKSTLV++LS+++L + +F TL P L V ++ +D G
Sbjct: 156 KYIADVGLLGLPNAGKSTLVNSLSNTNLKTANYMFTTLSPSLGVVNFEDEHLVFADIPGI 215
Query: 355 ISD------LPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV-GVS 407
I D L L L+ + L+H++ + E L +++++ +
Sbjct: 216 IEDASNGSGLGLDF-------LKHIERCHFLIHLISVANIDTENPFKDYLTIVEELKKYN 268
Query: 408 EEKLKNMIE-VWNKIDYHD 425
+E LK I V NKID +D
Sbjct: 269 KEILKRKIFIVLNKIDEND 287
>sp|B9L101|OBG_THERP GTPase obg OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159
/ P-2) GN=obg PE=3 SV=1
Length = 467
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP---SGKVLLSDTVG 353
LA V +VG NAGKSTL++A+S + F TL+P L V +P G +L+D G
Sbjct: 158 LADVGLVGLPNAGKSTLLAAVSAARPKIADYPFTTLEPMLGVVSVPGREGGTFVLADLPG 217
Query: 354 FISDLPLQLVDAFHATLEEVVEADLLVHVLDCTA---------------PNLEEHRTTVL 398
I+ + H L V LL+HVLD + L + ++
Sbjct: 218 LIAGAS-RGAGLGHEFLRHVERTRLLIHVLDGSGGLEGRDPLEDFHTINAELAAYSASLA 276
Query: 399 QVLQQVGVSEEKLKNMIEVWNKIDYHDEEMGDVEY 433
Q V V++ L W +I +E+G Y
Sbjct: 277 GKPQIVAVNKMDLPEAQANWPRIARALDELGYTAY 311
>sp|Q3MCS7|OBG_ANAVT GTPase obg OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=obg PE=3 SV=1
Length = 342
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 298 ATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSG-KVLLSDTVGFIS 356
A V ++G NAGKSTL+S+LS + F TL P L V P+G + +D G I
Sbjct: 160 AEVGIIGLPNAGKSTLISSLSAARPKIADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIE 219
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQV--GVSEEKLKNM 414
H L + +L+H++D T+ ++ T+ Q LQ G+SE +
Sbjct: 220 G-AADGAGLGHDFLRHIERTRVLLHLIDATSDDVIRDYNTIEQELQAYGRGLSE---RMQ 275
Query: 415 IEVWNKIDYHDEEMGDVEYI 434
I NKID D E D++ +
Sbjct: 276 IVALNKIDAVDRETVDLDAL 295
>sp|C0ZAL7|OBG_BREBN GTPase obg OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC
100599) GN=obg PE=3 SV=1
Length = 425
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFIS 356
+A V +VGY + GKSTL+S+++ + A F TL P L V L +++D G I
Sbjct: 158 IADVGLVGYPSVGKSTLLSSVTAAKPKIAAYHFTTLTPNLGVVDLGERSFVMADLPGLIE 217
Query: 357 DLPLQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKN--M 414
+ V H L V L+VHV+D A + + LQ+ +++ + KL++
Sbjct: 218 G-AHEGVGLGHQFLRHVERTRLIVHVIDMAAVDGRDPYEDYLQINRELTLYNLKLEDRPQ 276
Query: 415 IEVWNKIDYHDEE 427
I V NK++ + E
Sbjct: 277 IVVANKMELPEAE 289
>sp|Q6AK07|OBG_DESPS GTPase obg OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343)
GN=obg PE=3 SV=1
Length = 372
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLP-SGKVLLSDTVGFI 355
+A V +VG NAGKSTL+S LS ++ F TL+P+L + P +++D G +
Sbjct: 159 MADVGLVGLPNAGKSTLLSKLSAANPKVADYPFTTLEPQLGMLHFPMRNSCIIADIPGLV 218
Query: 356 SDLPLQLVDAFHATLEEVVEADLLVHVLDCTA 387
Q V H L V +LVHV+D +A
Sbjct: 219 EG-AHQGVGLGHKFLRHVERTKILVHVIDASA 249
>sp|Q2NCX8|OBG_ERYLH GTPase obg OS=Erythrobacter litoralis (strain HTCC2594) GN=obg PE=3
SV=1
Length = 352
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 297 LATVAVVGYTNAGKSTLVSALSDSDLFSDARLFATLDPRLKSVVLPSGKVLLSDTVGFIS 356
LA V ++G NAGKST ++A+S++ F TL P+L V + +L+D G I
Sbjct: 159 LADVGLLGLPNAGKSTFINAVSNAKAKVGHYAFTTLVPKLGVVNHKGREFVLADIPGLIE 218
Query: 357 DLP--LQLVDAFHATLEEVVEADLLVHVLDCTAPNLEEHRTTVLQVLQQVGVSEEKLKNM 414
+ D F +E +L+H++D + + E TV L+ G E +
Sbjct: 219 GAAEGAGIGDRFLGHIERC---RVLIHLVDISGEDPAEAFQTVNAELEAYGEGLEDKPQL 275
Query: 415 IEVWNKIDYHDEEM 428
+ + NK+D DEE+
Sbjct: 276 VAL-NKLDLADEEL 288
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,126,194
Number of Sequences: 539616
Number of extensions: 10577916
Number of successful extensions: 37263
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 1038
Number of HSP's that attempted gapping in prelim test: 36226
Number of HSP's gapped (non-prelim): 1820
length of query: 596
length of database: 191,569,459
effective HSP length: 123
effective length of query: 473
effective length of database: 125,196,691
effective search space: 59218034843
effective search space used: 59218034843
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)